SMGD1_RS09655 3619ff39e9abc73d5ea6a599afba0cc2 348 PRINTS PR01010 Flagellar P-ring protein signature 77 96 4.7E-68 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SMGD1_RS09655 3619ff39e9abc73d5ea6a599afba0cc2 348 PRINTS PR01010 Flagellar P-ring protein signature 99 116 4.7E-68 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SMGD1_RS09655 3619ff39e9abc73d5ea6a599afba0cc2 348 PRINTS PR01010 Flagellar P-ring protein signature 153 171 4.7E-68 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SMGD1_RS09655 3619ff39e9abc73d5ea6a599afba0cc2 348 PRINTS PR01010 Flagellar P-ring protein signature 241 253 4.7E-68 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SMGD1_RS09655 3619ff39e9abc73d5ea6a599afba0cc2 348 PRINTS PR01010 Flagellar P-ring protein signature 52 67 4.7E-68 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SMGD1_RS09655 3619ff39e9abc73d5ea6a599afba0cc2 348 PRINTS PR01010 Flagellar P-ring protein signature 116 134 4.7E-68 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SMGD1_RS09655 3619ff39e9abc73d5ea6a599afba0cc2 348 PRINTS PR01010 Flagellar P-ring protein signature 18 33 4.7E-68 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SMGD1_RS09655 3619ff39e9abc73d5ea6a599afba0cc2 348 PRINTS PR01010 Flagellar P-ring protein signature 33 48 4.7E-68 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SMGD1_RS09655 3619ff39e9abc73d5ea6a599afba0cc2 348 PRINTS PR01010 Flagellar P-ring protein signature 179 197 4.7E-68 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SMGD1_RS09655 3619ff39e9abc73d5ea6a599afba0cc2 348 PANTHER PTHR30381:SF1 3 348 2.4E-109 T 22-04-2016 SMGD1_RS09655 3619ff39e9abc73d5ea6a599afba0cc2 348 Pfam PF02119 Flagellar P-ring protein 18 347 6.1E-114 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SMGD1_RS09655 3619ff39e9abc73d5ea6a599afba0cc2 348 Hamap MF_00416 Flagellar P-ring protein [flgI]. 2 348 33.086 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SMGD1_RS09655 3619ff39e9abc73d5ea6a599afba0cc2 348 PANTHER PTHR30381 3 348 2.4E-109 T 22-04-2016 SMGD1_RS14440 562a75fcb7fce81fcea192e1bb8aacaf 629 Gene3D G3DSA:3.30.450.20 248 407 6.0E-24 T 22-04-2016 SMGD1_RS14440 562a75fcb7fce81fcea192e1bb8aacaf 629 Gene3D G3DSA:3.30.565.10 463 627 2.0E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS14440 562a75fcb7fce81fcea192e1bb8aacaf 629 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 519 628 9.7E-15 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS14440 562a75fcb7fce81fcea192e1bb8aacaf 629 Gene3D G3DSA:1.10.287.130 408 462 3.9E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS14440 562a75fcb7fce81fcea192e1bb8aacaf 629 SMART SM00387 517 629 1.1E-14 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS14440 562a75fcb7fce81fcea192e1bb8aacaf 629 SUPERFAMILY SSF55874 471 627 3.54E-26 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS14440 562a75fcb7fce81fcea192e1bb8aacaf 629 Pfam PF08447 PAS fold 292 378 4.1E-9 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 SMGD1_RS14440 562a75fcb7fce81fcea192e1bb8aacaf 629 Pfam PF00989 PAS fold 143 252 8.3E-7 T 22-04-2016 IPR013767 PAS fold GO:0006355 SMGD1_RS14440 562a75fcb7fce81fcea192e1bb8aacaf 629 Gene3D G3DSA:3.30.450.20 144 247 9.7E-12 T 22-04-2016 SMGD1_RS14440 562a75fcb7fce81fcea192e1bb8aacaf 629 SMART SM00388 407 477 3.9E-4 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS14440 562a75fcb7fce81fcea192e1bb8aacaf 629 PANTHER PTHR24423 143 628 6.6E-56 T 22-04-2016 SMGD1_RS14440 562a75fcb7fce81fcea192e1bb8aacaf 629 SUPERFAMILY SSF55785 146 252 2.09E-11 T 22-04-2016 IPR000014 PAS domain SMGD1_RS14440 562a75fcb7fce81fcea192e1bb8aacaf 629 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 143 263 9.2E-8 T 22-04-2016 IPR000014 PAS domain SMGD1_RS14440 562a75fcb7fce81fcea192e1bb8aacaf 629 SUPERFAMILY SSF47384 401 477 1.51E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS14440 562a75fcb7fce81fcea192e1bb8aacaf 629 SUPERFAMILY SSF55785 278 387 1.11E-10 T 22-04-2016 IPR000014 PAS domain SMGD1_RS14440 562a75fcb7fce81fcea192e1bb8aacaf 629 PRINTS PR00344 Bacterial sensor protein C-terminal signature 589 607 4.8E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS14440 562a75fcb7fce81fcea192e1bb8aacaf 629 PRINTS PR00344 Bacterial sensor protein C-terminal signature 613 626 4.8E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS14440 562a75fcb7fce81fcea192e1bb8aacaf 629 PRINTS PR00344 Bacterial sensor protein C-terminal signature 576 586 4.8E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS02120 966d2f75b7569f858f1dc5ee833d6c9a 222 PANTHER PTHR26402:SF578 1 221 4.3E-27 T 22-04-2016 SMGD1_RS02120 966d2f75b7569f858f1dc5ee833d6c9a 222 Gene3D G3DSA:1.10.10.10 127 219 1.6E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMGD1_RS02120 966d2f75b7569f858f1dc5ee833d6c9a 222 SMART SM00862 148 218 2.3E-12 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMGD1_RS02120 966d2f75b7569f858f1dc5ee833d6c9a 222 SUPERFAMILY SSF46894 124 219 1.93E-19 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SMGD1_RS02120 966d2f75b7569f858f1dc5ee833d6c9a 222 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 217 4.8E-14 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMGD1_RS02120 966d2f75b7569f858f1dc5ee833d6c9a 222 Pfam PF00072 Response regulator receiver domain 4 113 2.0E-5 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS02120 966d2f75b7569f858f1dc5ee833d6c9a 222 PANTHER PTHR26402 1 221 4.3E-27 T 22-04-2016 SMGD1_RS02120 966d2f75b7569f858f1dc5ee833d6c9a 222 SUPERFAMILY SSF52172 1 177 8.25E-13 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS02120 966d2f75b7569f858f1dc5ee833d6c9a 222 Gene3D G3DSA:3.40.50.2300 1 126 2.3E-13 T 22-04-2016 SMGD1_RS04890 0aee29f2c1b7d03363a52d64733a57f4 122 PANTHER PTHR11761 1 122 1.2E-71 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 SMGD1_RS04890 0aee29f2c1b7d03363a52d64733a57f4 122 SMART SM01374 1 122 1.1E-81 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 SMGD1_RS04890 0aee29f2c1b7d03363a52d64733a57f4 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 26.113 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 SMGD1_RS04890 0aee29f2c1b7d03363a52d64733a57f4 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 1.6E-53 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 SMGD1_RS04890 0aee29f2c1b7d03363a52d64733a57f4 122 SUPERFAMILY SSF50193 1 122 4.97E-51 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 SMGD1_RS04890 0aee29f2c1b7d03363a52d64733a57f4 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 22-04-2016 IPR019972 Ribosomal protein L14P, conserved site SMGD1_RS04890 0aee29f2c1b7d03363a52d64733a57f4 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 1.1E-55 T 22-04-2016 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 SMGD1_RS04890 0aee29f2c1b7d03363a52d64733a57f4 122 Gene3D G3DSA:2.40.150.20 1 122 1.9E-53 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 SMGD1_RS03780 a40d7ac5ce1b72a7da7efedeaddc87fb 228 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 32 201 3.1E-70 T 22-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 SMGD1_RS03780 a40d7ac5ce1b72a7da7efedeaddc87fb 228 SUPERFAMILY SSF55729 3 216 1.06E-83 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMGD1_RS03780 a40d7ac5ce1b72a7da7efedeaddc87fb 228 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 36 213 2.1E-57 T 22-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 SMGD1_RS03780 a40d7ac5ce1b72a7da7efedeaddc87fb 228 PANTHER PTHR30098 1 228 1.4E-65 T 22-04-2016 SMGD1_RS03780 a40d7ac5ce1b72a7da7efedeaddc87fb 228 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 228 81.601 T 22-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 SMGD1_RS09450 812801d4a7c28b74737d06beda0842a1 235 PIRSF PIRSF006325 1 235 4.7E-81 T 22-04-2016 IPR005271 tRNA (cmo5U34)-methyltransferase GO:0002098|GO:0016300 SMGD1_RS09450 812801d4a7c28b74737d06beda0842a1 235 Hamap MF_01589 tRNA (cmo5U34)-methyltransferase [cmoA]. 1 235 37.583 T 22-04-2016 IPR005271 tRNA (cmo5U34)-methyltransferase GO:0002098|GO:0016300 SMGD1_RS09450 812801d4a7c28b74737d06beda0842a1 235 PANTHER PTHR10108:SF809 1 178 1.1E-29 T 22-04-2016 SMGD1_RS09450 812801d4a7c28b74737d06beda0842a1 235 PANTHER PTHR10108:SF809 208 234 1.1E-29 T 22-04-2016 SMGD1_RS09450 812801d4a7c28b74737d06beda0842a1 235 PANTHER PTHR10108 1 178 1.1E-29 T 22-04-2016 SMGD1_RS09450 812801d4a7c28b74737d06beda0842a1 235 PANTHER PTHR10108 208 234 1.1E-29 T 22-04-2016 SMGD1_RS09450 812801d4a7c28b74737d06beda0842a1 235 Pfam PF13649 Methyltransferase domain 56 151 4.5E-13 T 22-04-2016 SMGD1_RS09450 812801d4a7c28b74737d06beda0842a1 235 Gene3D G3DSA:3.40.50.150 15 235 1.7E-49 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS09450 812801d4a7c28b74737d06beda0842a1 235 TIGRFAM TIGR00740 TIGR00740: tRNA (cmo5U34)-methyltransferase 3 235 2.1E-70 T 22-04-2016 IPR005271 tRNA (cmo5U34)-methyltransferase GO:0002098|GO:0016300 SMGD1_RS09450 812801d4a7c28b74737d06beda0842a1 235 SUPERFAMILY SSF53335 15 235 3.53E-32 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS07395 cc2f7967772f9a81714115500011b382 396 Gene3D G3DSA:3.30.565.10 258 395 8.4E-27 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS07395 cc2f7967772f9a81714115500011b382 396 SUPERFAMILY SSF55874 258 395 6.42E-26 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS07395 cc2f7967772f9a81714115500011b382 396 PANTHER PTHR24423 182 396 6.6E-34 T 22-04-2016 SMGD1_RS07395 cc2f7967772f9a81714115500011b382 396 PANTHER PTHR24423 140 155 6.6E-34 T 22-04-2016 SMGD1_RS07395 cc2f7967772f9a81714115500011b382 396 SMART SM00387 296 396 8.8E-16 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS07395 cc2f7967772f9a81714115500011b382 396 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 297 394 1.5E-14 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS07395 cc2f7967772f9a81714115500011b382 396 SUPERFAMILY SSF47384 172 247 2.94E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS07395 cc2f7967772f9a81714115500011b382 396 Gene3D G3DSA:1.10.287.130 182 241 2.8E-4 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS07395 cc2f7967772f9a81714115500011b382 396 Pfam PF00512 His Kinase A (phospho-acceptor) domain 191 245 5.3E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS07395 cc2f7967772f9a81714115500011b382 396 SMART SM00388 187 253 0.0014 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS02455 25ef2d4c93110d2ac2573ee4ed651fde 302 PANTHER PTHR23293 245 302 3.0E-89 T 22-04-2016 SMGD1_RS02455 25ef2d4c93110d2ac2573ee4ed651fde 302 PANTHER PTHR23293 178 211 3.0E-89 T 22-04-2016 SMGD1_RS02455 25ef2d4c93110d2ac2573ee4ed651fde 302 PANTHER PTHR23293 1 158 3.0E-89 T 22-04-2016 SMGD1_RS02455 25ef2d4c93110d2ac2573ee4ed651fde 302 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 29 257 1.0E-59 T 22-04-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 SMGD1_RS02455 25ef2d4c93110d2ac2573ee4ed651fde 302 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 9 302 2.8E-146 T 22-04-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 SMGD1_RS02455 25ef2d4c93110d2ac2573ee4ed651fde 302 SUPERFAMILY SSF52402 5 210 1.23E-69 T 22-04-2016 SMGD1_RS02455 25ef2d4c93110d2ac2573ee4ed651fde 302 PANTHER PTHR23293:SF6 245 302 3.0E-89 T 22-04-2016 SMGD1_RS02455 25ef2d4c93110d2ac2573ee4ed651fde 302 PANTHER PTHR23293:SF6 178 211 3.0E-89 T 22-04-2016 SMGD1_RS02455 25ef2d4c93110d2ac2573ee4ed651fde 302 PANTHER PTHR23293:SF6 1 158 3.0E-89 T 22-04-2016 SMGD1_RS02455 25ef2d4c93110d2ac2573ee4ed651fde 302 Gene3D G3DSA:3.40.50.620 244 253 4.7E-59 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMGD1_RS02455 25ef2d4c93110d2ac2573ee4ed651fde 302 Gene3D G3DSA:3.40.50.620 4 210 4.7E-59 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMGD1_RS02455 25ef2d4c93110d2ac2573ee4ed651fde 302 PIRSF PIRSF002936 1 302 6.6E-148 T 22-04-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 SMGD1_RS08910 d5425b415802ce5a81131745c0c4e36b 220 PANTHER PTHR26402 2 218 4.2E-68 T 22-04-2016 SMGD1_RS08910 d5425b415802ce5a81131745c0c4e36b 220 SMART SM00448 2 112 1.9E-38 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS08910 d5425b415802ce5a81131745c0c4e36b 220 SMART SM00862 146 218 1.2E-15 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMGD1_RS08910 d5425b415802ce5a81131745c0c4e36b 220 Gene3D G3DSA:3.40.50.2300 1 129 3.1E-40 T 22-04-2016 SMGD1_RS08910 d5425b415802ce5a81131745c0c4e36b 220 Gene3D G3DSA:1.10.10.10 131 218 9.6E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMGD1_RS08910 d5425b415802ce5a81131745c0c4e36b 220 PANTHER PTHR26402:SF50 2 218 4.2E-68 T 22-04-2016 SMGD1_RS08910 d5425b415802ce5a81131745c0c4e36b 220 Pfam PF00072 Response regulator receiver domain 4 112 1.4E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS08910 d5425b415802ce5a81131745c0c4e36b 220 SUPERFAMILY SSF46894 145 218 2.38E-13 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SMGD1_RS08910 d5425b415802ce5a81131745c0c4e36b 220 SUPERFAMILY SSF52172 1 166 5.27E-41 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS08910 d5425b415802ce5a81131745c0c4e36b 220 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 218 8.4E-18 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMGD1_RS13785 064d476db38d8b5d327d0f617da37376 1123 Gene3D G3DSA:2.130.10.10 35 338 5.7E-64 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 SMGD1_RS13785 064d476db38d8b5d327d0f617da37376 1123 Gene3D G3DSA:2.130.10.10 427 662 2.6E-60 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 SMGD1_RS13785 064d476db38d8b5d327d0f617da37376 1123 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 472 486 - T 22-04-2016 IPR019775 WD40 repeat, conserved site SMGD1_RS13785 064d476db38d8b5d327d0f617da37376 1123 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 252 266 - T 22-04-2016 IPR019775 WD40 repeat, conserved site SMGD1_RS13785 064d476db38d8b5d327d0f617da37376 1123 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 77 91 - T 22-04-2016 IPR019775 WD40 repeat, conserved site SMGD1_RS13785 064d476db38d8b5d327d0f617da37376 1123 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 119 133 - T 22-04-2016 IPR019775 WD40 repeat, conserved site SMGD1_RS13785 064d476db38d8b5d327d0f617da37376 1123 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 518 532 - T 22-04-2016 IPR019775 WD40 repeat, conserved site SMGD1_RS13785 064d476db38d8b5d327d0f617da37376 1123 SUPERFAMILY SSF50998 179 316 1.06E-72 T 22-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily SMGD1_RS13785 064d476db38d8b5d327d0f617da37376 1123 SUPERFAMILY SSF50998 445 661 1.06E-72 T 22-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily SMGD1_RS13785 064d476db38d8b5d327d0f617da37376 1123 SUPERFAMILY SSF50978 41 241 8.24E-36 T 22-04-2016 IPR017986 WD40-repeat-containing domain GO:0005515 SMGD1_RS13785 064d476db38d8b5d327d0f617da37376 1123 Pfam PF00656 Caspase domain 874 1111 1.9E-17 T 22-04-2016 SMGD1_RS13785 064d476db38d8b5d327d0f617da37376 1123 Pfam PF00400 WD domain, G-beta repeat 60 90 0.05 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS13785 064d476db38d8b5d327d0f617da37376 1123 Pfam PF00400 WD domain, G-beta repeat 577 614 1.4E-5 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS13785 064d476db38d8b5d327d0f617da37376 1123 Pfam PF00400 WD domain, G-beta repeat 618 655 0.054 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS13785 064d476db38d8b5d327d0f617da37376 1123 Pfam PF00400 WD domain, G-beta repeat 228 265 1.1E-5 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS13785 064d476db38d8b5d327d0f617da37376 1123 Pfam PF00400 WD domain, G-beta repeat 447 485 1.9E-8 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS13785 064d476db38d8b5d327d0f617da37376 1123 Pfam PF00400 WD domain, G-beta repeat 505 531 0.073 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS13785 064d476db38d8b5d327d0f617da37376 1123 Pfam PF00400 WD domain, G-beta repeat 94 132 7.2E-5 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS13785 064d476db38d8b5d327d0f617da37376 1123 SUPERFAMILY SSF50952 290 392 1.12E-7 T 22-04-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 SMGD1_RS13785 064d476db38d8b5d327d0f617da37376 1123 PRINTS PR00320 G protein beta WD-40 repeat signature 472 486 3.0E-8 T 22-04-2016 IPR020472 G-protein beta WD-40 repeat SMGD1_RS13785 064d476db38d8b5d327d0f617da37376 1123 PRINTS PR00320 G protein beta WD-40 repeat signature 119 133 3.0E-8 T 22-04-2016 IPR020472 G-protein beta WD-40 repeat SMGD1_RS13785 064d476db38d8b5d327d0f617da37376 1123 PRINTS PR00320 G protein beta WD-40 repeat signature 252 266 3.0E-8 T 22-04-2016 IPR020472 G-protein beta WD-40 repeat SMGD1_RS13785 064d476db38d8b5d327d0f617da37376 1123 SUPERFAMILY SSF52129 865 1108 2.86E-9 T 22-04-2016 IPR029030 Caspase-like domain SMGD1_RS13785 064d476db38d8b5d327d0f617da37376 1123 SMART SM00320 52 90 0.021 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS13785 064d476db38d8b5d327d0f617da37376 1123 SMART SM00320 93 132 1.2E-8 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS13785 064d476db38d8b5d327d0f617da37376 1123 SMART SM00320 617 656 1.0E-4 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS13785 064d476db38d8b5d327d0f617da37376 1123 SMART SM00320 226 265 1.9E-7 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS13785 064d476db38d8b5d327d0f617da37376 1123 SMART SM00320 135 181 3.6 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS13785 064d476db38d8b5d327d0f617da37376 1123 SMART SM00320 575 614 2.6E-9 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS13785 064d476db38d8b5d327d0f617da37376 1123 SMART SM00320 184 223 190.0 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS13785 064d476db38d8b5d327d0f617da37376 1123 SMART SM00320 268 306 2.8E-4 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS13785 064d476db38d8b5d327d0f617da37376 1123 SMART SM00320 446 485 1.3E-10 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS13785 064d476db38d8b5d327d0f617da37376 1123 SMART SM00320 488 531 0.0011 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS13785 064d476db38d8b5d327d0f617da37376 1123 SMART SM00320 534 572 22.0 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS13785 064d476db38d8b5d327d0f617da37376 1123 PANTHER PTHR22847 575 655 7.3E-79 T 22-04-2016 SMGD1_RS13785 064d476db38d8b5d327d0f617da37376 1123 PANTHER PTHR22847 41 154 7.3E-79 T 22-04-2016 SMGD1_RS13785 064d476db38d8b5d327d0f617da37376 1123 PANTHER PTHR22847 245 312 7.3E-79 T 22-04-2016 SMGD1_RS13785 064d476db38d8b5d327d0f617da37376 1123 PANTHER PTHR22847 450 533 7.3E-79 T 22-04-2016 SMGD1_RS13785 064d476db38d8b5d327d0f617da37376 1123 Gene3D G3DSA:3.40.50.1460 871 1011 6.3E-14 T 22-04-2016 IPR029030 Caspase-like domain SMGD1_RS10490 495b194778628882fafcc61994846653 161 Gene3D G3DSA:2.40.50.180 42 77 6.9E-11 T 22-04-2016 SMGD1_RS10490 495b194778628882fafcc61994846653 161 PANTHER PTHR22617 4 154 3.0E-37 T 22-04-2016 SMGD1_RS10490 495b194778628882fafcc61994846653 161 SUPERFAMILY SSF50341 4 141 6.28E-34 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SMGD1_RS10490 495b194778628882fafcc61994846653 161 Gene3D G3DSA:2.30.30.40 78 131 7.7E-5 T 22-04-2016 SMGD1_RS10490 495b194778628882fafcc61994846653 161 SMART SM00260 4 138 4.1E-25 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SMGD1_RS10490 495b194778628882fafcc61994846653 161 Pfam PF01584 CheW-like domain 5 140 6.6E-33 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SMGD1_RS05260 efb49b476c156b275f2e93b19258d4c2 275 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 9.0E-38 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SMGD1_RS05260 efb49b476c156b275f2e93b19258d4c2 275 PANTHER PTHR30244 3 275 1.8E-84 T 22-04-2016 SMGD1_RS05260 efb49b476c156b275f2e93b19258d4c2 275 SUPERFAMILY SSF64518 1 275 1.44E-74 T 22-04-2016 SMGD1_RS05260 efb49b476c156b275f2e93b19258d4c2 275 Gene3D G3DSA:1.20.1330.10 55 231 8.6E-50 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SMGD1_RS05260 efb49b476c156b275f2e93b19258d4c2 275 Pfam PF00700 Bacterial flagellin C-terminal helical region 190 274 2.2E-25 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SMGD1_RS05260 efb49b476c156b275f2e93b19258d4c2 275 PANTHER PTHR30244:SF1 3 275 1.8E-84 T 22-04-2016 SMGD1_RS05260 efb49b476c156b275f2e93b19258d4c2 275 PRINTS PR00207 Flagellin signature 37 54 5.2E-20 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 SMGD1_RS05260 efb49b476c156b275f2e93b19258d4c2 275 PRINTS PR00207 Flagellin signature 76 95 5.2E-20 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 SMGD1_RS05260 efb49b476c156b275f2e93b19258d4c2 275 PRINTS PR00207 Flagellin signature 111 134 5.2E-20 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 SMGD1_RS04160 a9b6b37a9b96feab811ec2fb3f9f37b5 496 Gene3D G3DSA:3.40.50.300 232 415 2.6E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS04160 a9b6b37a9b96feab811ec2fb3f9f37b5 496 Gene3D G3DSA:3.40.50.300 3 161 6.7E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS04160 a9b6b37a9b96feab811ec2fb3f9f37b5 496 Gene3D G3DSA:3.30.300.20 416 493 1.2E-30 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta SMGD1_RS04160 a9b6b37a9b96feab811ec2fb3f9f37b5 496 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 2 154 6.9E-22 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SMGD1_RS04160 a9b6b37a9b96feab811ec2fb3f9f37b5 496 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 236 401 8.9E-28 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SMGD1_RS04160 a9b6b37a9b96feab811ec2fb3f9f37b5 496 PANTHER PTHR11649 1 165 1.2E-103 T 22-04-2016 SMGD1_RS04160 a9b6b37a9b96feab811ec2fb3f9f37b5 496 PANTHER PTHR11649 219 486 1.2E-103 T 22-04-2016 SMGD1_RS04160 a9b6b37a9b96feab811ec2fb3f9f37b5 496 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 490 3.2E-148 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 SMGD1_RS04160 a9b6b37a9b96feab811ec2fb3f9f37b5 496 Hamap MF_00195 GTPase Der [der]. 1 494 33.793 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 SMGD1_RS04160 a9b6b37a9b96feab811ec2fb3f9f37b5 496 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 411 491 5.4E-28 T 22-04-2016 IPR032859 GTPase Der, C-terminal KH-domain-like SMGD1_RS04160 a9b6b37a9b96feab811ec2fb3f9f37b5 496 SUPERFAMILY SSF52540 3 170 5.43E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS04160 a9b6b37a9b96feab811ec2fb3f9f37b5 496 SUPERFAMILY SSF52540 222 492 9.65E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS04160 a9b6b37a9b96feab811ec2fb3f9f37b5 496 PIRSF PIRSF006485 1 496 1.3E-145 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 SMGD1_RS04160 a9b6b37a9b96feab811ec2fb3f9f37b5 496 PANTHER PTHR11649:SF5 1 165 1.2E-103 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 SMGD1_RS04160 a9b6b37a9b96feab811ec2fb3f9f37b5 496 PANTHER PTHR11649:SF5 219 486 1.2E-103 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 SMGD1_RS04160 a9b6b37a9b96feab811ec2fb3f9f37b5 496 Pfam PF01926 50S ribosome-binding GTPase 3 117 1.3E-22 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SMGD1_RS04160 a9b6b37a9b96feab811ec2fb3f9f37b5 496 Pfam PF01926 50S ribosome-binding GTPase 238 355 2.1E-22 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SMGD1_RS04160 a9b6b37a9b96feab811ec2fb3f9f37b5 496 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 4 24 1.1E-5 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SMGD1_RS04160 a9b6b37a9b96feab811ec2fb3f9f37b5 496 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 88 1.1E-5 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SMGD1_RS12025 105ae2f17f0a7d48ab947df3c8af6ff7 647 SUPERFAMILY SSF52540 4 231 7.17E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS12025 105ae2f17f0a7d48ab947df3c8af6ff7 647 Pfam PF12848 ABC transporter 227 299 5.2E-7 T 22-04-2016 IPR032781 ABC-transporter extension domain SMGD1_RS12025 105ae2f17f0a7d48ab947df3c8af6ff7 647 Pfam PF00005 ABC transporter 19 188 5.4E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMGD1_RS12025 105ae2f17f0a7d48ab947df3c8af6ff7 647 Pfam PF00005 ABC transporter 347 481 7.3E-22 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMGD1_RS12025 105ae2f17f0a7d48ab947df3c8af6ff7 647 Gene3D G3DSA:3.40.50.300 126 263 2.9E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS12025 105ae2f17f0a7d48ab947df3c8af6ff7 647 Gene3D G3DSA:3.40.50.300 330 554 1.2E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS12025 105ae2f17f0a7d48ab947df3c8af6ff7 647 Gene3D G3DSA:3.40.50.300 2 90 2.9E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS12025 105ae2f17f0a7d48ab947df3c8af6ff7 647 PANTHER PTHR19211 1 583 1.0E-142 T 22-04-2016 SMGD1_RS12025 105ae2f17f0a7d48ab947df3c8af6ff7 647 Pfam PF16326 ABC transporter C-terminal domain 573 640 6.5E-8 T 22-04-2016 IPR032524 ABC transporter Uup, C-terminal GO:0003677 SMGD1_RS12025 105ae2f17f0a7d48ab947df3c8af6ff7 647 SUPERFAMILY SSF52540 315 530 1.0E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS12025 105ae2f17f0a7d48ab947df3c8af6ff7 647 ProSitePatterns PS00211 ABC transporters family signature. 453 467 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMGD1_RS12025 105ae2f17f0a7d48ab947df3c8af6ff7 647 ProSitePatterns PS00211 ABC transporters family signature. 160 174 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMGD1_RS12025 105ae2f17f0a7d48ab947df3c8af6ff7 647 SMART SM00382 28 233 6.7E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain SMGD1_RS12025 105ae2f17f0a7d48ab947df3c8af6ff7 647 SMART SM00382 356 534 3.2E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain SMGD1_RS01445 6bd74e4f375414d1b41885555f897d4d 400 SUPERFAMILY SSF49265 256 366 4.97E-7 T 22-04-2016 IPR003961 Fibronectin type III GO:0005515 SMGD1_RS01445 6bd74e4f375414d1b41885555f897d4d 400 SUPERFAMILY SSF49265 95 261 2.56E-11 T 22-04-2016 IPR003961 Fibronectin type III GO:0005515 SMGD1_RS01445 6bd74e4f375414d1b41885555f897d4d 400 Gene3D G3DSA:2.60.40.10 98 179 4.1E-10 T 22-04-2016 IPR013783 Immunoglobulin-like fold SMGD1_RS01445 6bd74e4f375414d1b41885555f897d4d 400 Gene3D G3DSA:2.60.40.10 2 76 1.9E-7 T 22-04-2016 IPR013783 Immunoglobulin-like fold SMGD1_RS01445 6bd74e4f375414d1b41885555f897d4d 400 Gene3D G3DSA:2.60.40.10 193 260 1.9E-13 T 22-04-2016 IPR013783 Immunoglobulin-like fold SMGD1_RS01445 6bd74e4f375414d1b41885555f897d4d 400 Gene3D G3DSA:2.60.40.10 278 363 1.2E-10 T 22-04-2016 IPR013783 Immunoglobulin-like fold SMGD1_RS05750 55ac02afa68996efb8adb488b618f775 245 Gene3D G3DSA:3.30.70.270 86 242 4.1E-47 T 22-04-2016 SMGD1_RS05750 55ac02afa68996efb8adb488b618f775 245 SMART SM00267 74 241 8.7E-48 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS05750 55ac02afa68996efb8adb488b618f775 245 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 83 241 7.3E-44 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS05750 55ac02afa68996efb8adb488b618f775 245 PANTHER PTHR10799 1 236 7.8E-26 T 22-04-2016 SMGD1_RS05750 55ac02afa68996efb8adb488b618f775 245 SUPERFAMILY SSF55073 89 242 3.37E-42 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS05750 55ac02afa68996efb8adb488b618f775 245 Pfam PF00990 Diguanylate cyclase, GGDEF domain 85 236 2.7E-42 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS05750 55ac02afa68996efb8adb488b618f775 245 PANTHER PTHR10799:SF710 1 236 7.8E-26 T 22-04-2016 SMGD1_RS07750 0378144ef21939c5ce417d6603dc6809 253 PANTHER PTHR11228:SF33 50 156 5.9E-15 T 22-04-2016 SMGD1_RS07750 0378144ef21939c5ce417d6603dc6809 253 PANTHER PTHR11228:SF33 6 34 5.9E-15 T 22-04-2016 SMGD1_RS07750 0378144ef21939c5ce417d6603dc6809 253 Gene3D G3DSA:3.20.20.70 28 184 6.1E-10 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMGD1_RS07750 0378144ef21939c5ce417d6603dc6809 253 Pfam PF13394 4Fe-4S single cluster domain 23 154 1.3E-26 T 22-04-2016 SMGD1_RS07750 0378144ef21939c5ce417d6603dc6809 253 PANTHER PTHR11228 50 156 5.9E-15 T 22-04-2016 SMGD1_RS07750 0378144ef21939c5ce417d6603dc6809 253 PANTHER PTHR11228 6 34 5.9E-15 T 22-04-2016 SMGD1_RS07750 0378144ef21939c5ce417d6603dc6809 253 SUPERFAMILY SSF102114 70 183 1.96E-9 T 22-04-2016 SMGD1_RS07750 0378144ef21939c5ce417d6603dc6809 253 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 2 250 35.232 T 22-04-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 SMGD1_RS02800 a41730c6a7401b8e9fce470b5bc8a1c7 123 SMART SM00878 1 77 1.8E-21 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal SMGD1_RS02800 a41730c6a7401b8e9fce470b5bc8a1c7 123 SUPERFAMILY SSF51246 1 83 5.76E-24 T 22-04-2016 IPR011054 Rudiment single hybrid motif SMGD1_RS02800 a41730c6a7401b8e9fce470b5bc8a1c7 123 Gene3D G3DSA:3.30.470.20 1 81 7.0E-18 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SMGD1_RS02800 a41730c6a7401b8e9fce470b5bc8a1c7 123 PANTHER PTHR18866 1 99 3.1E-28 T 22-04-2016 SMGD1_RS02800 a41730c6a7401b8e9fce470b5bc8a1c7 123 Pfam PF02785 Biotin carboxylase C-terminal domain 1 77 1.7E-24 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal SMGD1_RS09295 ec4f05125b19aef9fc947ebd29ad7b2b 303 Pfam PF02219 Methylenetetrahydrofolate reductase 10 303 3.8E-25 T 22-04-2016 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 SMGD1_RS09295 ec4f05125b19aef9fc947ebd29ad7b2b 303 SUPERFAMILY SSF51730 9 302 8.24E-47 T 22-04-2016 IPR029041 FAD-linked oxidoreductase-like SMGD1_RS09295 ec4f05125b19aef9fc947ebd29ad7b2b 303 Gene3D G3DSA:3.20.20.220 3 303 3.3E-45 T 22-04-2016 IPR029041 FAD-linked oxidoreductase-like SMGD1_RS10695 b6b8aa24fa69dd20a738ea3010e9b11d 829 PANTHER PTHR10169 6 780 0.0 T 22-04-2016 SMGD1_RS10695 b6b8aa24fa69dd20a738ea3010e9b11d 829 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 34 471 3.7E-156 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMGD1_RS10695 b6b8aa24fa69dd20a738ea3010e9b11d 829 PANTHER PTHR10169:SF48 6 780 0.0 T 22-04-2016 SMGD1_RS10695 b6b8aa24fa69dd20a738ea3010e9b11d 829 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 5 816 27.871 T 22-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SMGD1_RS10695 b6b8aa24fa69dd20a738ea3010e9b11d 829 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 10 804 0.0 T 22-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SMGD1_RS10695 b6b8aa24fa69dd20a738ea3010e9b11d 829 Gene3D G3DSA:3.90.199.10 334 399 1.3E-118 T 22-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 SMGD1_RS10695 b6b8aa24fa69dd20a738ea3010e9b11d 829 Gene3D G3DSA:3.90.199.10 32 237 1.3E-118 T 22-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 SMGD1_RS10695 b6b8aa24fa69dd20a738ea3010e9b11d 829 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 555 604 1.6E-5 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SMGD1_RS10695 b6b8aa24fa69dd20a738ea3010e9b11d 829 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 506 551 7.5E-10 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SMGD1_RS10695 b6b8aa24fa69dd20a738ea3010e9b11d 829 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 767 793 0.0026 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SMGD1_RS10695 b6b8aa24fa69dd20a738ea3010e9b11d 829 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 712 749 2.7E-9 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SMGD1_RS10695 b6b8aa24fa69dd20a738ea3010e9b11d 829 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 661 707 1.6E-6 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SMGD1_RS10695 b6b8aa24fa69dd20a738ea3010e9b11d 829 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 613 655 3.7E-11 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SMGD1_RS10695 b6b8aa24fa69dd20a738ea3010e9b11d 829 SUPERFAMILY SSF101904 500 818 1.96E-96 T 22-04-2016 SMGD1_RS10695 b6b8aa24fa69dd20a738ea3010e9b11d 829 Gene3D G3DSA:2.120.10.90 498 803 2.2E-114 T 22-04-2016 SMGD1_RS10695 b6b8aa24fa69dd20a738ea3010e9b11d 829 SMART SM00434 13 465 6.2E-271 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMGD1_RS10695 b6b8aa24fa69dd20a738ea3010e9b11d 829 SUPERFAMILY SSF56719 32 485 4.45E-172 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 SMGD1_RS10695 b6b8aa24fa69dd20a738ea3010e9b11d 829 Gene3D G3DSA:3.30.1360.40 238 332 1.8E-38 T 22-04-2016 IPR024946 Arginine repressor C-terminal-like domain SMGD1_RS11210 25e6a577bbbc78bae485ce0b06d4d0e4 186 PANTHER PTHR30302:SF1 1 163 4.1E-36 T 22-04-2016 SMGD1_RS11210 25e6a577bbbc78bae485ce0b06d4d0e4 186 SUPERFAMILY SSF53163 1 157 8.63E-34 T 22-04-2016 IPR023430 Peptidase HybD-like domain SMGD1_RS11210 25e6a577bbbc78bae485ce0b06d4d0e4 186 Pfam PF01750 Hydrogenase maturation protease 21 144 1.7E-24 T 22-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 SMGD1_RS11210 25e6a577bbbc78bae485ce0b06d4d0e4 186 PANTHER PTHR30302 1 163 4.1E-36 T 22-04-2016 SMGD1_RS11210 25e6a577bbbc78bae485ce0b06d4d0e4 186 TIGRFAM TIGR00072 hydrog_prot: hydrogenase maturation protease 5 146 6.1E-32 T 22-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 SMGD1_RS11210 25e6a577bbbc78bae485ce0b06d4d0e4 186 Gene3D G3DSA:3.40.50.1450 1 157 3.8E-39 T 22-04-2016 IPR023430 Peptidase HybD-like domain SMGD1_RS11210 25e6a577bbbc78bae485ce0b06d4d0e4 186 PRINTS PR00446 Hydrogen uptake protein signature 3 15 5.9E-10 T 22-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 SMGD1_RS11210 25e6a577bbbc78bae485ce0b06d4d0e4 186 PRINTS PR00446 Hydrogen uptake protein signature 56 66 5.9E-10 T 22-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 SMGD1_RS11210 25e6a577bbbc78bae485ce0b06d4d0e4 186 PRINTS PR00446 Hydrogen uptake protein signature 35 52 5.9E-10 T 22-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 SMGD1_RS11210 25e6a577bbbc78bae485ce0b06d4d0e4 186 PRINTS PR00446 Hydrogen uptake protein signature 15 26 5.9E-10 T 22-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 SMGD1_RS14325 4d488848a48401f7151364892a5e4fc0 372 SUPERFAMILY SSF51971 320 351 2.59E-22 T 22-04-2016 SMGD1_RS14325 4d488848a48401f7151364892a5e4fc0 372 SUPERFAMILY SSF51971 2 209 2.59E-22 T 22-04-2016 SMGD1_RS14325 4d488848a48401f7151364892a5e4fc0 372 SUPERFAMILY SSF51971 270 292 2.59E-22 T 22-04-2016 SMGD1_RS14325 4d488848a48401f7151364892a5e4fc0 372 PANTHER PTHR13847 2 299 2.9E-28 T 22-04-2016 SMGD1_RS14325 4d488848a48401f7151364892a5e4fc0 372 PANTHER PTHR13847 317 368 2.9E-28 T 22-04-2016 SMGD1_RS14325 4d488848a48401f7151364892a5e4fc0 372 Gene3D G3DSA:3.50.50.60 127 197 1.2E-25 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS14325 4d488848a48401f7151364892a5e4fc0 372 Gene3D G3DSA:3.50.50.60 2 83 1.2E-25 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS14325 4d488848a48401f7151364892a5e4fc0 372 Gene3D G3DSA:3.50.50.60 309 364 1.2E-25 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS14325 4d488848a48401f7151364892a5e4fc0 372 Pfam PF01266 FAD dependent oxidoreductase 3 347 2.2E-30 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 SMGD1_RS00245 7c8a43f401b76d5012c7b7284f4cac3a 244 PANTHER PTHR23416:SF8 1 239 1.8E-49 T 22-04-2016 SMGD1_RS00245 7c8a43f401b76d5012c7b7284f4cac3a 244 PIRSF PIRSF000456 1 244 2.0E-53 T 22-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 SMGD1_RS00245 7c8a43f401b76d5012c7b7284f4cac3a 244 PANTHER PTHR23416 1 239 1.8E-49 T 22-04-2016 SMGD1_RS00245 7c8a43f401b76d5012c7b7284f4cac3a 244 Gene3D G3DSA:1.20.1180.10 185 242 8.2E-7 T 22-04-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 SMGD1_RS00245 7c8a43f401b76d5012c7b7284f4cac3a 244 SUPERFAMILY SSF51161 1 210 6.6E-48 T 22-04-2016 IPR011004 Trimeric LpxA-like SMGD1_RS00245 7c8a43f401b76d5012c7b7284f4cac3a 244 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 167 241 4.3E-14 T 22-04-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 SMGD1_RS00245 7c8a43f401b76d5012c7b7284f4cac3a 244 Gene3D G3DSA:2.160.10.10 1 181 7.7E-35 T 22-04-2016 SMGD1_RS00245 7c8a43f401b76d5012c7b7284f4cac3a 244 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 11 41 5.2E-5 T 22-04-2016 IPR001451 Hexapeptide repeat SMGD1_RS14075 c23c98ba7a8623f471a56344cdaacd12 254 Pfam PF01618 MotA/TolQ/ExbB proton channel family 100 215 2.6E-19 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 SMGD1_RS14075 c23c98ba7a8623f471a56344cdaacd12 254 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 184 201 - T 22-04-2016 IPR000540 Flagellar motor protein MotA, conserved site SMGD1_RS14075 c23c98ba7a8623f471a56344cdaacd12 254 PANTHER PTHR30433 2 249 7.3E-95 T 22-04-2016 SMGD1_RS14075 c23c98ba7a8623f471a56344cdaacd12 254 PANTHER PTHR30433:SF2 2 249 7.3E-95 T 22-04-2016 IPR022522 Flagellar motor stator, MotA SMGD1_RS03690 a63ed91e37017e835d884a4f5aad68d6 570 Pfam PF01514 Secretory protein of YscJ/FliF family 30 220 3.0E-62 T 22-04-2016 IPR006182 Secretory protein YscJ/FliF SMGD1_RS03690 a63ed91e37017e835d884a4f5aad68d6 570 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 10 560 1.7E-131 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 SMGD1_RS03690 a63ed91e37017e835d884a4f5aad68d6 570 PIRSF PIRSF004862 1 562 1.5E-121 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 SMGD1_RS03690 a63ed91e37017e835d884a4f5aad68d6 570 PANTHER PTHR30046:SF0 1 562 4.8E-114 T 22-04-2016 SMGD1_RS03690 a63ed91e37017e835d884a4f5aad68d6 570 Pfam PF08345 Flagellar M-ring protein C-terminal 261 424 7.4E-41 T 22-04-2016 IPR013556 Flagellar M-ring C-terminal SMGD1_RS03690 a63ed91e37017e835d884a4f5aad68d6 570 PANTHER PTHR30046 1 562 4.8E-114 T 22-04-2016 SMGD1_RS03690 a63ed91e37017e835d884a4f5aad68d6 570 PRINTS PR01009 Flagellar M-ring protein signature 342 366 4.1E-32 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 SMGD1_RS03690 a63ed91e37017e835d884a4f5aad68d6 570 PRINTS PR01009 Flagellar M-ring protein signature 154 168 4.1E-32 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 SMGD1_RS03690 a63ed91e37017e835d884a4f5aad68d6 570 PRINTS PR01009 Flagellar M-ring protein signature 269 287 4.1E-32 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 SMGD1_RS03690 a63ed91e37017e835d884a4f5aad68d6 570 PRINTS PR01009 Flagellar M-ring protein signature 197 215 4.1E-32 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 SMGD1_RS03690 a63ed91e37017e835d884a4f5aad68d6 570 PRINTS PR01009 Flagellar M-ring protein signature 122 140 4.1E-32 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 SMGD1_RS06545 4056301189ecf1b4d12b174ee4a19968 641 Gene3D G3DSA:3.20.20.450 409 631 4.2E-6 T 22-04-2016 IPR001633 EAL domain SMGD1_RS06545 4056301189ecf1b4d12b174ee4a19968 641 SMART SM00267 225 395 1.7E-7 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS06545 4056301189ecf1b4d12b174ee4a19968 641 Pfam PF00990 Diguanylate cyclase, GGDEF domain 236 388 2.3E-20 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS06545 4056301189ecf1b4d12b174ee4a19968 641 SUPERFAMILY SSF55073 241 394 1.49E-16 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS06545 4056301189ecf1b4d12b174ee4a19968 641 SUPERFAMILY SSF141868 413 633 3.14E-8 T 22-04-2016 IPR001633 EAL domain SMGD1_RS06545 4056301189ecf1b4d12b174ee4a19968 641 Pfam PF16448 LapD/MoxY periplasmic domain 24 144 1.9E-34 T 22-04-2016 IPR032244 LapD/MoxY, periplasmic domain SMGD1_RS06545 4056301189ecf1b4d12b174ee4a19968 641 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 235 393 1.1E-13 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS06545 4056301189ecf1b4d12b174ee4a19968 641 Pfam PF00563 EAL domain 412 634 1.9E-10 T 22-04-2016 IPR001633 EAL domain SMGD1_RS06545 4056301189ecf1b4d12b174ee4a19968 641 Gene3D G3DSA:3.30.70.270 237 393 8.4E-19 T 22-04-2016 SMGD1_RS13175 d463ca34da0dc86b378f1fc576d39c1e 389 PANTHER PTHR11751:SF306 12 389 1.9E-152 T 22-04-2016 SMGD1_RS13175 d463ca34da0dc86b378f1fc576d39c1e 389 SUPERFAMILY SSF53383 2 386 5.5E-112 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SMGD1_RS13175 d463ca34da0dc86b378f1fc576d39c1e 389 PANTHER PTHR11751 12 389 1.9E-152 T 22-04-2016 SMGD1_RS13175 d463ca34da0dc86b378f1fc576d39c1e 389 Gene3D G3DSA:3.40.640.10 43 272 1.3E-69 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SMGD1_RS13175 d463ca34da0dc86b378f1fc576d39c1e 389 Gene3D G3DSA:3.90.1150.10 273 388 1.7E-40 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SMGD1_RS13175 d463ca34da0dc86b378f1fc576d39c1e 389 Pfam PF00155 Aminotransferase class I and II 30 380 3.9E-69 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SMGD1_RS01845 f6ee603a21da9808c38eb249bf0725b4 922 Pfam PF01584 CheW-like domain 785 909 6.4E-16 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SMGD1_RS01845 f6ee603a21da9808c38eb249bf0725b4 922 Gene3D G3DSA:1.10.287.560 525 593 4.3E-11 T 22-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 SMGD1_RS01845 f6ee603a21da9808c38eb249bf0725b4 922 SUPERFAMILY SSF47226 1 109 5.5E-25 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SMGD1_RS01845 f6ee603a21da9808c38eb249bf0725b4 922 PANTHER PTHR22617 1 143 2.0E-148 T 22-04-2016 SMGD1_RS01845 f6ee603a21da9808c38eb249bf0725b4 922 PANTHER PTHR22617 358 920 2.0E-148 T 22-04-2016 SMGD1_RS01845 f6ee603a21da9808c38eb249bf0725b4 922 Gene3D G3DSA:2.40.50.180 804 864 3.8E-9 T 22-04-2016 SMGD1_RS01845 f6ee603a21da9808c38eb249bf0725b4 922 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 641 778 3.5E-13 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS01845 f6ee603a21da9808c38eb249bf0725b4 922 SMART SM00073 1 96 1.4E-18 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SMGD1_RS01845 f6ee603a21da9808c38eb249bf0725b4 922 SMART SM01231 525 592 8.3E-6 T 22-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 SMGD1_RS01845 f6ee603a21da9808c38eb249bf0725b4 922 Pfam PF01627 Hpt domain 4 92 1.1E-16 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SMGD1_RS01845 f6ee603a21da9808c38eb249bf0725b4 922 PANTHER PTHR22617:SF6 1 143 2.0E-148 T 22-04-2016 SMGD1_RS01845 f6ee603a21da9808c38eb249bf0725b4 922 PANTHER PTHR22617:SF6 358 920 2.0E-148 T 22-04-2016 SMGD1_RS01845 f6ee603a21da9808c38eb249bf0725b4 922 SMART SM00260 772 909 2.1E-15 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SMGD1_RS01845 f6ee603a21da9808c38eb249bf0725b4 922 SUPERFAMILY SSF47384 526 593 3.45E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS01845 f6ee603a21da9808c38eb249bf0725b4 922 Gene3D G3DSA:2.30.30.40 780 801 6.8E-11 T 22-04-2016 SMGD1_RS01845 f6ee603a21da9808c38eb249bf0725b4 922 Gene3D G3DSA:2.30.30.40 865 908 6.8E-11 T 22-04-2016 SMGD1_RS01845 f6ee603a21da9808c38eb249bf0725b4 922 SMART SM00387 637 780 6.1E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS01845 f6ee603a21da9808c38eb249bf0725b4 922 Gene3D G3DSA:3.30.565.10 594 778 1.8E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS01845 f6ee603a21da9808c38eb249bf0725b4 922 SUPERFAMILY SSF55874 594 777 2.88E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS01845 f6ee603a21da9808c38eb249bf0725b4 922 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 526 591 1.8E-9 T 22-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 SMGD1_RS01845 f6ee603a21da9808c38eb249bf0725b4 922 PRINTS PR00344 Bacterial sensor protein C-terminal signature 682 696 4.8E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS01845 f6ee603a21da9808c38eb249bf0725b4 922 PRINTS PR00344 Bacterial sensor protein C-terminal signature 740 758 4.8E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS01845 f6ee603a21da9808c38eb249bf0725b4 922 PRINTS PR00344 Bacterial sensor protein C-terminal signature 764 777 4.8E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS01845 f6ee603a21da9808c38eb249bf0725b4 922 SUPERFAMILY SSF50341 779 909 4.32E-23 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SMGD1_RS01845 f6ee603a21da9808c38eb249bf0725b4 922 Gene3D G3DSA:1.20.120.160 1 130 1.6E-29 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SMGD1_RS03660 2f6ddb63b9d8d9024e72623e0266149c 699 Gene3D G3DSA:3.90.1580.10 187 451 7.6E-45 T 22-04-2016 IPR005532 Sulfatase-modifying factor enzyme SMGD1_RS03660 2f6ddb63b9d8d9024e72623e0266149c 699 Pfam PF13847 Methyltransferase domain 497 634 1.5E-10 T 22-04-2016 IPR025714 Methyltransferase domain SMGD1_RS03660 2f6ddb63b9d8d9024e72623e0266149c 699 TIGRFAM TIGR04345 ovoA_Cterm: putative 4-mercaptohistidine N1-methyltranferase 459 698 2.2E-94 T 22-04-2016 IPR027625 Putative 4-mercaptohistidine N1-methyltranferase, OvoA C-terminal domain SMGD1_RS03660 2f6ddb63b9d8d9024e72623e0266149c 699 Pfam PF03781 Sulfatase-modifying factor enzyme 1 193 446 1.3E-23 T 22-04-2016 IPR005532 Sulfatase-modifying factor enzyme SMGD1_RS03660 2f6ddb63b9d8d9024e72623e0266149c 699 Gene3D G3DSA:3.40.50.150 452 537 3.2E-24 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS03660 2f6ddb63b9d8d9024e72623e0266149c 699 Gene3D G3DSA:3.40.50.150 570 671 3.2E-24 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS03660 2f6ddb63b9d8d9024e72623e0266149c 699 PANTHER PTHR23150:SF24 1 483 1.0E-169 T 22-04-2016 SMGD1_RS03660 2f6ddb63b9d8d9024e72623e0266149c 699 TIGRFAM TIGR04344 ovoA_Nterm: 5-histidylcysteine sulfoxide synthase 8 446 2.9E-201 T 22-04-2016 IPR027577 5-histidylcysteine sulfoxide synthase SMGD1_RS03660 2f6ddb63b9d8d9024e72623e0266149c 699 SUPERFAMILY SSF56436 191 448 6.12E-49 T 22-04-2016 IPR016187 C-type lectin fold SMGD1_RS03660 2f6ddb63b9d8d9024e72623e0266149c 699 Pfam PF12867 DinB superfamily 30 162 2.5E-5 T 22-04-2016 IPR024775 DinB-like domain SMGD1_RS03660 2f6ddb63b9d8d9024e72623e0266149c 699 SUPERFAMILY SSF53335 567 654 1.09E-21 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS03660 2f6ddb63b9d8d9024e72623e0266149c 699 SUPERFAMILY SSF53335 450 540 1.09E-21 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS03660 2f6ddb63b9d8d9024e72623e0266149c 699 PANTHER PTHR23150 1 483 1.0E-169 T 22-04-2016 SMGD1_RS11925 5f9ab58f5b72400a4e2a981327a2ccc7 224 Pfam PF02678 Pirin 57 122 5.4E-13 T 22-04-2016 IPR003829 Pirin, N-terminal domain SMGD1_RS11925 5f9ab58f5b72400a4e2a981327a2ccc7 224 SUPERFAMILY SSF51182 19 221 8.91E-34 T 22-04-2016 IPR011051 RmlC-like cupin domain SMGD1_RS11925 5f9ab58f5b72400a4e2a981327a2ccc7 224 PANTHER PTHR13903 60 221 2.0E-13 T 22-04-2016 IPR012093 Pirin SMGD1_RS11925 5f9ab58f5b72400a4e2a981327a2ccc7 224 Gene3D G3DSA:2.60.120.10 27 221 2.0E-27 T 22-04-2016 IPR014710 RmlC-like jelly roll fold SMGD1_RS11925 5f9ab58f5b72400a4e2a981327a2ccc7 224 PANTHER PTHR13903:SF7 60 221 2.0E-13 T 22-04-2016 SMGD1_RS09250 33ff2c7f86e2eaabb8be5e889030f916 326 SUPERFAMILY SSF55729 11 152 1.91E-17 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMGD1_RS09250 33ff2c7f86e2eaabb8be5e889030f916 326 PIRSF PIRSF018688 5 326 1.5E-93 T 22-04-2016 IPR016732 Uncharacterised conserved protein UCP018688 SMGD1_RS09250 33ff2c7f86e2eaabb8be5e889030f916 326 PANTHER PTHR41373 5 324 6.1E-39 T 22-04-2016 SMGD1_RS09250 33ff2c7f86e2eaabb8be5e889030f916 326 Gene3D G3DSA:3.40.630.30 149 318 1.8E-52 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMGD1_RS09250 33ff2c7f86e2eaabb8be5e889030f916 326 Gene3D G3DSA:3.40.630.30 12 148 4.2E-14 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMGD1_RS09250 33ff2c7f86e2eaabb8be5e889030f916 326 Pfam PF09924 Uncharacterised conserved protein (DUF2156) 34 324 2.2E-29 T 22-04-2016 IPR024320 Phosphatidylglycerol lysyltransferase, C-terminal SMGD1_RS09250 33ff2c7f86e2eaabb8be5e889030f916 326 SUPERFAMILY SSF55729 154 326 6.04E-46 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMGD1_RS07115 55680fd562c9da90df0de4fb28687794 276 PANTHER PTHR30024:SF17 27 257 3.5E-14 T 22-04-2016 SMGD1_RS07115 55680fd562c9da90df0de4fb28687794 276 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 27 239 4.5E-28 T 22-04-2016 SMGD1_RS07115 55680fd562c9da90df0de4fb28687794 276 PANTHER PTHR30024 27 257 3.5E-14 T 22-04-2016 SMGD1_RS07115 55680fd562c9da90df0de4fb28687794 276 SUPERFAMILY SSF53850 3 232 7.49E-26 T 22-04-2016 SMGD1_RS07115 55680fd562c9da90df0de4fb28687794 276 Gene3D G3DSA:3.40.190.10 21 105 1.3E-6 T 22-04-2016 SMGD1_RS07115 55680fd562c9da90df0de4fb28687794 276 Gene3D G3DSA:3.40.190.10 106 187 4.5E-13 T 22-04-2016 SMGD1_RS12510 4fc1b6d836616ddb6f732e8389a70d95 306 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 33 51 - T 22-04-2016 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 SMGD1_RS12510 4fc1b6d836616ddb6f732e8389a70d95 306 TIGRFAM TIGR01139 cysK: cysteine synthase A 8 305 8.4E-138 T 22-04-2016 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 SMGD1_RS12510 4fc1b6d836616ddb6f732e8389a70d95 306 TIGRFAM TIGR01136 cysKM: cysteine synthase 8 305 5.8E-133 T 22-04-2016 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 SMGD1_RS12510 4fc1b6d836616ddb6f732e8389a70d95 306 Gene3D G3DSA:3.40.50.1100 135 304 1.5E-78 T 22-04-2016 SMGD1_RS12510 4fc1b6d836616ddb6f732e8389a70d95 306 PANTHER PTHR10314:SF110 1 305 3.1E-159 T 22-04-2016 SMGD1_RS12510 4fc1b6d836616ddb6f732e8389a70d95 306 Gene3D G3DSA:3.40.50.1100 38 134 2.5E-39 T 22-04-2016 SMGD1_RS12510 4fc1b6d836616ddb6f732e8389a70d95 306 PANTHER PTHR10314 1 305 3.1E-159 T 22-04-2016 SMGD1_RS12510 4fc1b6d836616ddb6f732e8389a70d95 306 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 8 294 2.0E-70 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SMGD1_RS12510 4fc1b6d836616ddb6f732e8389a70d95 306 SUPERFAMILY SSF53686 2 304 1.23E-106 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SMGD1_RS11860 0461a01064579a1212b0bf6f0c21fa36 829 SMART SM00304 341 393 1.6E-4 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SMGD1_RS11860 0461a01064579a1212b0bf6f0c21fa36 829 SUPERFAMILY SSF158472 343 389 3.4E-7 T 22-04-2016 SMGD1_RS11860 0461a01064579a1212b0bf6f0c21fa36 829 Gene3D G3DSA:3.20.20.450 575 824 1.8E-90 T 22-04-2016 IPR001633 EAL domain SMGD1_RS11860 0461a01064579a1212b0bf6f0c21fa36 829 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 396 558 5.3E-43 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS11860 0461a01064579a1212b0bf6f0c21fa36 829 PANTHER PTHR10799:SF774 12 115 1.5E-74 T 22-04-2016 SMGD1_RS11860 0461a01064579a1212b0bf6f0c21fa36 829 PANTHER PTHR10799:SF774 432 650 1.5E-74 T 22-04-2016 SMGD1_RS11860 0461a01064579a1212b0bf6f0c21fa36 829 PANTHER PTHR10799:SF774 758 777 1.5E-74 T 22-04-2016 SMGD1_RS11860 0461a01064579a1212b0bf6f0c21fa36 829 Pfam PF00672 HAMP domain 321 388 1.9E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SMGD1_RS11860 0461a01064579a1212b0bf6f0c21fa36 829 Pfam PF00990 Diguanylate cyclase, GGDEF domain 399 556 9.5E-50 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS11860 0461a01064579a1212b0bf6f0c21fa36 829 PANTHER PTHR10799 12 115 1.5E-74 T 22-04-2016 SMGD1_RS11860 0461a01064579a1212b0bf6f0c21fa36 829 PANTHER PTHR10799 432 650 1.5E-74 T 22-04-2016 SMGD1_RS11860 0461a01064579a1212b0bf6f0c21fa36 829 PANTHER PTHR10799 758 777 1.5E-74 T 22-04-2016 SMGD1_RS11860 0461a01064579a1212b0bf6f0c21fa36 829 Gene3D G3DSA:3.30.70.270 401 565 8.9E-54 T 22-04-2016 SMGD1_RS11860 0461a01064579a1212b0bf6f0c21fa36 829 SMART SM00267 388 560 4.6E-61 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS11860 0461a01064579a1212b0bf6f0c21fa36 829 SUPERFAMILY SSF55073 404 562 9.42E-49 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS11860 0461a01064579a1212b0bf6f0c21fa36 829 SMART SM00052 570 816 1.8E-99 T 22-04-2016 IPR001633 EAL domain SMGD1_RS11860 0461a01064579a1212b0bf6f0c21fa36 829 SUPERFAMILY SSF141868 576 823 3.53E-83 T 22-04-2016 IPR001633 EAL domain SMGD1_RS11860 0461a01064579a1212b0bf6f0c21fa36 829 Pfam PF00563 EAL domain 576 811 4.4E-66 T 22-04-2016 IPR001633 EAL domain SMGD1_RS12620 3309a660182a910db514572e1440ebc4 403 TIGRFAM TIGR03862 flavo_PP4765: flavoprotein, TIGR03862 family 23 400 1.2E-138 T 22-04-2016 IPR022460 Conserved hyptotheical protein CHP03862, flavoprotein, PP4765 SMGD1_RS12620 3309a660182a910db514572e1440ebc4 403 Pfam PF03486 HI0933-like protein 2 394 1.0E-98 T 22-04-2016 SMGD1_RS12620 3309a660182a910db514572e1440ebc4 403 Gene3D G3DSA:2.40.30.10 188 286 2.2E-7 T 22-04-2016 SMGD1_RS12620 3309a660182a910db514572e1440ebc4 403 Gene3D G3DSA:3.50.50.60 2 185 1.7E-35 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS12620 3309a660182a910db514572e1440ebc4 403 Gene3D G3DSA:3.50.50.60 342 397 1.7E-35 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS12620 3309a660182a910db514572e1440ebc4 403 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 1 22 8.3E-8 T 22-04-2016 SMGD1_RS12620 3309a660182a910db514572e1440ebc4 403 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 361 376 8.3E-8 T 22-04-2016 SMGD1_RS12620 3309a660182a910db514572e1440ebc4 403 SUPERFAMILY SSF160996 188 343 3.14E-14 T 22-04-2016 SMGD1_RS12620 3309a660182a910db514572e1440ebc4 403 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 2 393 1.0E-85 T 22-04-2016 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like SMGD1_RS12620 3309a660182a910db514572e1440ebc4 403 SUPERFAMILY SSF51905 340 397 1.07E-38 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS12620 3309a660182a910db514572e1440ebc4 403 SUPERFAMILY SSF51905 2 187 1.07E-38 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS06870 71ff68687f6ebd34127afa74cecc8130 82 Gene3D G3DSA:1.10.1200.10 1 78 5.4E-22 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain SMGD1_RS06870 71ff68687f6ebd34127afa74cecc8130 82 Pfam PF00550 Phosphopantetheine attachment site 8 75 7.2E-15 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain SMGD1_RS06870 71ff68687f6ebd34127afa74cecc8130 82 Hamap MF_01217 Acyl carrier protein [acpP]. 5 79 15.445 T 22-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 SMGD1_RS06870 71ff68687f6ebd34127afa74cecc8130 82 SUPERFAMILY SSF47336 1 78 3.14E-20 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain SMGD1_RS14020 5ce79970dd7efc522b7e8ab80b4852e2 270 Gene3D G3DSA:2.40.50.100 151 183 2.1E-12 T 22-04-2016 SMGD1_RS14020 5ce79970dd7efc522b7e8ab80b4852e2 270 Gene3D G3DSA:2.40.50.100 34 65 2.1E-12 T 22-04-2016 SMGD1_RS14020 5ce79970dd7efc522b7e8ab80b4852e2 270 PANTHER PTHR30469 21 266 1.6E-31 T 22-04-2016 SMGD1_RS14020 5ce79970dd7efc522b7e8ab80b4852e2 270 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 31 256 3.2E-26 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SMGD1_RS14020 5ce79970dd7efc522b7e8ab80b4852e2 270 SUPERFAMILY SSF111369 22 261 7.72E-15 T 22-04-2016 SMGD1_RS14020 5ce79970dd7efc522b7e8ab80b4852e2 270 PANTHER PTHR30469:SF15 21 266 1.6E-31 T 22-04-2016 SMGD1_RS09805 dc7e011bf0a23f519ed7db7c1509ef1d 419 SUPERFAMILY SSF51445 161 345 3.09E-12 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily SMGD1_RS09805 dc7e011bf0a23f519ed7db7c1509ef1d 419 Gene3D G3DSA:3.20.20.80 160 343 7.8E-10 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SMGD1_RS10950 7185e1255f0af2af581dff2c8671e588 406 SUPERFAMILY SSF51338 17 69 6.48E-8 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SMGD1_RS10950 7185e1255f0af2af581dff2c8671e588 406 Gene3D G3DSA:2.30.40.10 349 380 9.3E-6 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SMGD1_RS10950 7185e1255f0af2af581dff2c8671e588 406 Gene3D G3DSA:2.30.40.10 4 61 1.6E-6 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SMGD1_RS10950 7185e1255f0af2af581dff2c8671e588 406 Pfam PF01979 Amidohydrolase family 54 402 3.0E-46 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 SMGD1_RS10950 7185e1255f0af2af581dff2c8671e588 406 SUPERFAMILY SSF51556 56 357 4.0E-55 T 22-04-2016 IPR032466 Metal-dependent hydrolase SMGD1_RS10950 7185e1255f0af2af581dff2c8671e588 406 Gene3D G3DSA:3.20.20.140 62 348 2.9E-49 T 22-04-2016 SMGD1_RS10950 7185e1255f0af2af581dff2c8671e588 406 PANTHER PTHR11271 24 402 7.6E-37 T 22-04-2016 SMGD1_RS10715 d0fe0816b7d7a3acc0a26dfa480c6532 216 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 141 214 1.7E-12 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 SMGD1_RS10715 d0fe0816b7d7a3acc0a26dfa480c6532 216 PRINTS PR01374 Gram-negative bacterial tonB protein signature 136 157 5.5E-10 T 22-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 SMGD1_RS10715 d0fe0816b7d7a3acc0a26dfa480c6532 216 PRINTS PR01374 Gram-negative bacterial tonB protein signature 157 175 5.5E-10 T 22-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 SMGD1_RS10715 d0fe0816b7d7a3acc0a26dfa480c6532 216 PRINTS PR01374 Gram-negative bacterial tonB protein signature 25 35 5.5E-10 T 22-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 SMGD1_RS10715 d0fe0816b7d7a3acc0a26dfa480c6532 216 Gene3D G3DSA:3.30.1150.10 127 215 8.1E-8 T 22-04-2016 SMGD1_RS10715 d0fe0816b7d7a3acc0a26dfa480c6532 216 SUPERFAMILY SSF74653 117 215 3.24E-12 T 22-04-2016 SMGD1_RS10715 d0fe0816b7d7a3acc0a26dfa480c6532 216 SUPERFAMILY SSF74653 24 35 3.24E-12 T 22-04-2016 SMGD1_RS10715 d0fe0816b7d7a3acc0a26dfa480c6532 216 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 143 214 4.5E-11 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 SMGD1_RS08870 420a7f408efa08c9aeda8797b13e980b 1127 Pfam PF02743 Cache domain 46 311 3.5E-22 T 22-04-2016 IPR033479 Double Cache domain 1 SMGD1_RS08870 420a7f408efa08c9aeda8797b13e980b 1127 SMART SM00387 663 779 1.2E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS08870 420a7f408efa08c9aeda8797b13e980b 1127 Pfam PF01627 Hpt domain 958 1024 2.2E-8 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SMGD1_RS08870 420a7f408efa08c9aeda8797b13e980b 1127 SMART SM00304 349 401 8.3E-6 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SMGD1_RS08870 420a7f408efa08c9aeda8797b13e980b 1127 Gene3D G3DSA:1.10.287.130 557 603 7.1E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS08870 420a7f408efa08c9aeda8797b13e980b 1127 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 428 538 9.7E-17 T 22-04-2016 IPR000014 PAS domain SMGD1_RS08870 420a7f408efa08c9aeda8797b13e980b 1127 Gene3D G3DSA:3.30.450.20 421 556 2.6E-24 T 22-04-2016 SMGD1_RS08870 420a7f408efa08c9aeda8797b13e980b 1127 SMART SM00388 551 616 4.7E-22 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS08870 420a7f408efa08c9aeda8797b13e980b 1127 Gene3D G3DSA:3.30.565.10 604 777 5.7E-43 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS08870 420a7f408efa08c9aeda8797b13e980b 1127 SUPERFAMILY SSF158472 349 398 7.98E-7 T 22-04-2016 SMGD1_RS08870 420a7f408efa08c9aeda8797b13e980b 1127 Gene3D G3DSA:1.20.120.160 914 1047 2.2E-23 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SMGD1_RS08870 420a7f408efa08c9aeda8797b13e980b 1127 SMART SM00448 800 918 6.3E-35 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS08870 420a7f408efa08c9aeda8797b13e980b 1127 SUPERFAMILY SSF55785 426 528 3.49E-27 T 22-04-2016 IPR000014 PAS domain SMGD1_RS08870 420a7f408efa08c9aeda8797b13e980b 1127 PRINTS PR00344 Bacterial sensor protein C-terminal signature 704 718 1.3E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS08870 420a7f408efa08c9aeda8797b13e980b 1127 PRINTS PR00344 Bacterial sensor protein C-terminal signature 722 732 1.3E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS08870 420a7f408efa08c9aeda8797b13e980b 1127 PRINTS PR00344 Bacterial sensor protein C-terminal signature 763 776 1.3E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS08870 420a7f408efa08c9aeda8797b13e980b 1127 PRINTS PR00344 Bacterial sensor protein C-terminal signature 739 757 1.3E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS08870 420a7f408efa08c9aeda8797b13e980b 1127 PANTHER PTHR24423 392 962 3.1E-168 T 22-04-2016 SMGD1_RS08870 420a7f408efa08c9aeda8797b13e980b 1127 PANTHER PTHR24423 10 28 3.1E-168 T 22-04-2016 SMGD1_RS08870 420a7f408efa08c9aeda8797b13e980b 1127 SUPERFAMILY SSF47226 901 1032 2.36E-18 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SMGD1_RS08870 420a7f408efa08c9aeda8797b13e980b 1127 Gene3D G3DSA:3.40.50.2300 798 913 1.7E-41 T 22-04-2016 SMGD1_RS08870 420a7f408efa08c9aeda8797b13e980b 1127 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 664 774 7.3E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS08870 420a7f408efa08c9aeda8797b13e980b 1127 SMART SM00086 489 531 2.0E-7 T 22-04-2016 IPR001610 PAC motif SMGD1_RS08870 420a7f408efa08c9aeda8797b13e980b 1127 SUPERFAMILY SSF55874 605 775 1.44E-42 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS08870 420a7f408efa08c9aeda8797b13e980b 1127 Pfam PF13426 PAS domain 430 530 2.5E-14 T 22-04-2016 IPR000014 PAS domain SMGD1_RS08870 420a7f408efa08c9aeda8797b13e980b 1127 SUPERFAMILY SSF52172 799 922 7.68E-37 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS08870 420a7f408efa08c9aeda8797b13e980b 1127 Pfam PF00072 Response regulator receiver domain 802 918 9.5E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS08870 420a7f408efa08c9aeda8797b13e980b 1127 Pfam PF00512 His Kinase A (phospho-acceptor) domain 551 615 2.0E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS08870 420a7f408efa08c9aeda8797b13e980b 1127 SUPERFAMILY SSF47384 537 617 4.9E-20 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS08870 420a7f408efa08c9aeda8797b13e980b 1127 Pfam PF00672 HAMP domain 330 396 8.1E-11 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SMGD1_RS06480 3db13cbcb78ed6cfee3ec327aea73537 862 SUPERFAMILY SSF55874 715 857 6.94E-25 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS06480 3db13cbcb78ed6cfee3ec327aea73537 862 SUPERFAMILY SSF47384 624 707 1.49E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS06480 3db13cbcb78ed6cfee3ec327aea73537 862 Gene3D G3DSA:3.30.565.10 716 858 2.6E-27 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS06480 3db13cbcb78ed6cfee3ec327aea73537 862 Gene3D G3DSA:3.40.190.10 106 187 6.8E-4 T 22-04-2016 SMGD1_RS06480 3db13cbcb78ed6cfee3ec327aea73537 862 Pfam PF09084 NMT1/THI5 like 35 240 3.1E-47 T 22-04-2016 IPR015168 SsuA/THI5-like SMGD1_RS06480 3db13cbcb78ed6cfee3ec327aea73537 862 Gene3D G3DSA:3.40.190.10 511 551 8.6E-18 T 22-04-2016 SMGD1_RS06480 3db13cbcb78ed6cfee3ec327aea73537 862 Gene3D G3DSA:3.40.190.10 329 408 8.6E-18 T 22-04-2016 SMGD1_RS06480 3db13cbcb78ed6cfee3ec327aea73537 862 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 751 859 5.6E-15 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS06480 3db13cbcb78ed6cfee3ec327aea73537 862 SMART SM00387 749 861 5.6E-16 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS06480 3db13cbcb78ed6cfee3ec327aea73537 862 PANTHER PTHR31528 1 331 3.7E-47 T 22-04-2016 IPR027939 NMT1/THI5 family GO:0009228 UniPathway: UPA00060 SMGD1_RS06480 3db13cbcb78ed6cfee3ec327aea73537 862 Gene3D G3DSA:1.10.287.130 626 703 6.3E-4 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS06480 3db13cbcb78ed6cfee3ec327aea73537 862 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 333 548 3.2E-23 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SMGD1_RS06480 3db13cbcb78ed6cfee3ec327aea73537 862 SUPERFAMILY SSF53850 23 259 4.27E-23 T 22-04-2016 SMGD1_RS06480 3db13cbcb78ed6cfee3ec327aea73537 862 PRINTS PR00344 Bacterial sensor protein C-terminal signature 821 839 2.6E-7 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS06480 3db13cbcb78ed6cfee3ec327aea73537 862 PRINTS PR00344 Bacterial sensor protein C-terminal signature 808 818 2.6E-7 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS06480 3db13cbcb78ed6cfee3ec327aea73537 862 PRINTS PR00344 Bacterial sensor protein C-terminal signature 790 804 2.6E-7 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS06480 3db13cbcb78ed6cfee3ec327aea73537 862 SMART SM00062 332 551 3.5E-18 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SMGD1_RS06480 3db13cbcb78ed6cfee3ec327aea73537 862 SUPERFAMILY SSF53850 333 552 1.63E-36 T 22-04-2016 SMGD1_RS06480 3db13cbcb78ed6cfee3ec327aea73537 862 Gene3D G3DSA:3.40.190.10 409 506 2.7E-6 T 22-04-2016 SMGD1_RS10120 f3f08af128795f8e03dc713d589c55c9 345 Gene3D G3DSA:1.10.3210.10 166 332 6.2E-23 T 22-04-2016 IPR006674 HD domain SMGD1_RS10120 f3f08af128795f8e03dc713d589c55c9 345 Gene3D G3DSA:3.40.50.2300 4 148 2.0E-36 T 22-04-2016 SMGD1_RS10120 f3f08af128795f8e03dc713d589c55c9 345 Pfam PF00072 Response regulator receiver domain 7 115 1.3E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS10120 f3f08af128795f8e03dc713d589c55c9 345 SUPERFAMILY SSF52172 3 142 2.99E-36 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS10120 f3f08af128795f8e03dc713d589c55c9 345 Pfam PF01966 HD domain 171 293 5.6E-18 T 22-04-2016 IPR006674 HD domain SMGD1_RS10120 f3f08af128795f8e03dc713d589c55c9 345 PANTHER PTHR26402 5 133 4.6E-36 T 22-04-2016 SMGD1_RS10120 f3f08af128795f8e03dc713d589c55c9 345 PANTHER PTHR26402 212 232 4.6E-36 T 22-04-2016 SMGD1_RS10120 f3f08af128795f8e03dc713d589c55c9 345 SMART SM00448 5 117 4.6E-31 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS10120 f3f08af128795f8e03dc713d589c55c9 345 SUPERFAMILY SSF109604 162 334 4.0E-41 T 22-04-2016 SMGD1_RS10120 f3f08af128795f8e03dc713d589c55c9 345 SMART SM00471 166 303 9.4E-8 T 22-04-2016 IPR003607 HD/PDEase domain SMGD1_RS07665 94885725f2367b7438491532247ec473 168 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 9 147 3.0E-68 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 SMGD1_RS07665 94885725f2367b7438491532247ec473 168 PANTHER PTHR35799 2 168 2.6E-88 T 22-04-2016 SMGD1_RS07665 94885725f2367b7438491532247ec473 168 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 1 159 34.38 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 SMGD1_RS07665 94885725f2367b7438491532247ec473 168 PIRSF PIRSF006160 1 162 2.8E-64 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 SMGD1_RS07665 94885725f2367b7438491532247ec473 168 Gene3D G3DSA:3.30.1360.80 1 166 4.0E-70 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 SMGD1_RS07665 94885725f2367b7438491532247ec473 168 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 4 154 3.4E-60 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 SMGD1_RS07665 94885725f2367b7438491532247ec473 168 SUPERFAMILY SSF63411 4 161 1.74E-63 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 SMGD1_RS07665 94885725f2367b7438491532247ec473 168 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 49 67 5.5E-47 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 SMGD1_RS07665 94885725f2367b7438491532247ec473 168 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 77 95 5.5E-47 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 SMGD1_RS07665 94885725f2367b7438491532247ec473 168 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 121 140 5.5E-47 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 SMGD1_RS07665 94885725f2367b7438491532247ec473 168 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 28 46 5.5E-47 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 SMGD1_RS07665 94885725f2367b7438491532247ec473 168 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 5 23 5.5E-47 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 SMGD1_RS02115 48b72d4f340cf6551ea3d689a7943632 793 Gene3D G3DSA:3.30.450.20 487 588 7.6E-18 T 22-04-2016 SMGD1_RS02115 48b72d4f340cf6551ea3d689a7943632 793 Gene3D G3DSA:1.10.3210.10 613 783 5.4E-22 T 22-04-2016 IPR006674 HD domain SMGD1_RS02115 48b72d4f340cf6551ea3d689a7943632 793 Pfam PF14827 Double sensory domain of two-component sensor kinase 55 224 4.7E-17 T 22-04-2016 IPR029150 Double Cache domain 3 SMGD1_RS02115 48b72d4f340cf6551ea3d689a7943632 793 SMART SM00471 614 751 7.7E-9 T 22-04-2016 IPR003607 HD/PDEase domain SMGD1_RS02115 48b72d4f340cf6551ea3d689a7943632 793 Pfam PF01966 HD domain 619 741 1.5E-18 T 22-04-2016 IPR006674 HD domain SMGD1_RS02115 48b72d4f340cf6551ea3d689a7943632 793 PANTHER PTHR24423 312 602 2.9E-26 T 22-04-2016 SMGD1_RS02115 48b72d4f340cf6551ea3d689a7943632 793 SMART SM00086 407 449 2.7E-6 T 22-04-2016 IPR001610 PAC motif SMGD1_RS02115 48b72d4f340cf6551ea3d689a7943632 793 SMART SM00086 547 589 1.2E-5 T 22-04-2016 IPR001610 PAC motif SMGD1_RS02115 48b72d4f340cf6551ea3d689a7943632 793 SUPERFAMILY SSF55785 348 448 9.77E-27 T 22-04-2016 IPR000014 PAS domain SMGD1_RS02115 48b72d4f340cf6551ea3d689a7943632 793 SUPERFAMILY SSF55785 487 586 1.12E-19 T 22-04-2016 IPR000014 PAS domain SMGD1_RS02115 48b72d4f340cf6551ea3d689a7943632 793 SMART SM00091 333 401 9.0E-5 T 22-04-2016 IPR000014 PAS domain SMGD1_RS02115 48b72d4f340cf6551ea3d689a7943632 793 SMART SM00091 475 541 0.78 T 22-04-2016 IPR000014 PAS domain SMGD1_RS02115 48b72d4f340cf6551ea3d689a7943632 793 Pfam PF13426 PAS domain 351 448 6.3E-17 T 22-04-2016 IPR000014 PAS domain SMGD1_RS02115 48b72d4f340cf6551ea3d689a7943632 793 Pfam PF13426 PAS domain 486 588 2.0E-11 T 22-04-2016 IPR000014 PAS domain SMGD1_RS02115 48b72d4f340cf6551ea3d689a7943632 793 SUPERFAMILY SSF109604 594 782 1.51E-39 T 22-04-2016 SMGD1_RS02115 48b72d4f340cf6551ea3d689a7943632 793 Gene3D G3DSA:3.30.450.20 347 448 6.6E-28 T 22-04-2016 SMGD1_RS02115 48b72d4f340cf6551ea3d689a7943632 793 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 347 454 6.2E-18 T 22-04-2016 IPR000014 PAS domain SMGD1_RS02115 48b72d4f340cf6551ea3d689a7943632 793 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 475 592 2.0E-14 T 22-04-2016 IPR000014 PAS domain SMGD1_RS02115 48b72d4f340cf6551ea3d689a7943632 793 SUPERFAMILY SSF103190 86 182 6.28E-6 T 22-04-2016 IPR029151 Periplasmic sensor domain-like SMGD1_RS03970 5aa875c85abcda236fc11b04ff6d65e6 727 Gene3D G3DSA:3.30.1370.10 583 655 9.4E-18 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 SMGD1_RS03970 5aa875c85abcda236fc11b04ff6d65e6 727 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 1 727 26.226 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 SMGD1_RS03970 5aa875c85abcda236fc11b04ff6d65e6 727 SUPERFAMILY SSF50249 653 726 7.15E-18 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMGD1_RS03970 5aa875c85abcda236fc11b04ff6d65e6 727 Gene3D G3DSA:2.40.50.140 656 726 1.8E-20 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMGD1_RS03970 5aa875c85abcda236fc11b04ff6d65e6 727 PIRSF PIRSF005499 1 727 1.2E-244 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 SMGD1_RS03970 5aa875c85abcda236fc11b04ff6d65e6 727 Pfam PF00013 KH domain 587 644 1.4E-8 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 SMGD1_RS03970 5aa875c85abcda236fc11b04ff6d65e6 727 Gene3D G3DSA:1.10.10.400 264 346 7.0E-20 T 22-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 SMGD1_RS03970 5aa875c85abcda236fc11b04ff6d65e6 727 Pfam PF00575 S1 RNA binding domain 656 718 2.5E-14 T 22-04-2016 IPR003029 S1 domain GO:0003676 SMGD1_RS03970 5aa875c85abcda236fc11b04ff6d65e6 727 SMART SM00316 658 727 8.7E-19 T 22-04-2016 IPR022967 RNA-binding domain, S1 SMGD1_RS03970 5aa875c85abcda236fc11b04ff6d65e6 727 SUPERFAMILY SSF55666 143 196 1.82E-12 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 SMGD1_RS03970 5aa875c85abcda236fc11b04ff6d65e6 727 Gene3D G3DSA:3.30.230.70 347 571 5.0E-70 T 22-04-2016 IPR027408 PNPase/RNase PH domain SMGD1_RS03970 5aa875c85abcda236fc11b04ff6d65e6 727 Gene3D G3DSA:3.30.230.70 4 239 2.4E-61 T 22-04-2016 IPR027408 PNPase/RNase PH domain SMGD1_RS03970 5aa875c85abcda236fc11b04ff6d65e6 727 Pfam PF03725 3' exoribonuclease family, domain 2 147 191 4.2E-10 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 SMGD1_RS03970 5aa875c85abcda236fc11b04ff6d65e6 727 Pfam PF03725 3' exoribonuclease family, domain 2 491 560 2.5E-7 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 SMGD1_RS03970 5aa875c85abcda236fc11b04ff6d65e6 727 SUPERFAMILY SSF54211 3 141 5.57E-41 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SMGD1_RS03970 5aa875c85abcda236fc11b04ff6d65e6 727 PANTHER PTHR11252 2 716 7.0E-239 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 SMGD1_RS03970 5aa875c85abcda236fc11b04ff6d65e6 727 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 278 351 2.1E-10 T 22-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 SMGD1_RS03970 5aa875c85abcda236fc11b04ff6d65e6 727 SUPERFAMILY SSF55666 481 574 1.11E-22 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 SMGD1_RS03970 5aa875c85abcda236fc11b04ff6d65e6 727 SUPERFAMILY SSF54791 587 677 1.61E-15 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 SMGD1_RS03970 5aa875c85abcda236fc11b04ff6d65e6 727 SUPERFAMILY SSF54211 326 518 1.47E-38 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SMGD1_RS03970 5aa875c85abcda236fc11b04ff6d65e6 727 SUPERFAMILY SSF46915 264 358 1.23E-17 T 22-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 SMGD1_RS03970 5aa875c85abcda236fc11b04ff6d65e6 727 Pfam PF01138 3' exoribonuclease family, domain 1 17 141 1.7E-18 T 22-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 SMGD1_RS03970 5aa875c85abcda236fc11b04ff6d65e6 727 Pfam PF01138 3' exoribonuclease family, domain 1 355 486 2.1E-15 T 22-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 SMGD1_RS03970 5aa875c85abcda236fc11b04ff6d65e6 727 SMART SM00322 582 648 3.8E-7 T 22-04-2016 IPR004087 K Homology domain GO:0003676 SMGD1_RS14245 28926842f7883fe6364ee9d8ab26d354 403 Gene3D G3DSA:3.20.20.450 84 189 7.9E-9 T 22-04-2016 IPR001633 EAL domain SMGD1_RS14245 28926842f7883fe6364ee9d8ab26d354 403 Pfam PF00563 EAL domain 66 196 3.5E-11 T 22-04-2016 IPR001633 EAL domain SMGD1_RS14245 28926842f7883fe6364ee9d8ab26d354 403 Gene3D G3DSA:1.10.3150.10 190 350 3.3E-15 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD SMGD1_RS14245 28926842f7883fe6364ee9d8ab26d354 403 PANTHER PTHR33525:SF4 3 365 1.5E-54 T 22-04-2016 SMGD1_RS14245 28926842f7883fe6364ee9d8ab26d354 403 PANTHER PTHR33525 3 365 1.5E-54 T 22-04-2016 SMGD1_RS14245 28926842f7883fe6364ee9d8ab26d354 403 SUPERFAMILY SSF109604 187 366 4.39E-16 T 22-04-2016 SMGD1_RS14245 28926842f7883fe6364ee9d8ab26d354 403 SUPERFAMILY SSF141868 9 199 2.62E-18 T 22-04-2016 IPR001633 EAL domain SMGD1_RS14245 28926842f7883fe6364ee9d8ab26d354 403 PIRSF PIRSF003180 1 391 4.1E-74 T 22-04-2016 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing SMGD1_RS07830 560e436c43e4a48d711d43c9f8cc519f 471 PANTHER PTHR11699 4 470 1.6E-179 T 22-04-2016 SMGD1_RS07830 560e436c43e4a48d711d43c9f8cc519f 471 Gene3D G3DSA:3.40.605.10 5 260 2.9E-70 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 SMGD1_RS07830 560e436c43e4a48d711d43c9f8cc519f 471 PANTHER PTHR11699:SF108 4 470 1.6E-179 T 22-04-2016 SMGD1_RS07830 560e436c43e4a48d711d43c9f8cc519f 471 SUPERFAMILY SSF53720 4 470 3.4E-135 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 SMGD1_RS07830 560e436c43e4a48d711d43c9f8cc519f 471 Pfam PF00171 Aldehyde dehydrogenase family 18 468 1.4E-140 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 SMGD1_RS07830 560e436c43e4a48d711d43c9f8cc519f 471 Gene3D G3DSA:3.40.309.10 261 443 7.7E-56 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 SMGD1_RS07830 560e436c43e4a48d711d43c9f8cc519f 471 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 246 253 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 SMGD1_RS05650 0130c5e372ed5b16c250c2aff96e03ce 701 PANTHER PTHR10724:SF1 1 697 2.1E-255 T 22-04-2016 SMGD1_RS05650 0130c5e372ed5b16c250c2aff96e03ce 701 SUPERFAMILY SSF47781 549 609 4.22E-12 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 SMGD1_RS05650 0130c5e372ed5b16c250c2aff96e03ce 701 Pfam PF00575 S1 RNA binding domain 626 697 1.8E-11 T 22-04-2016 IPR003029 S1 domain GO:0003676 SMGD1_RS05650 0130c5e372ed5b16c250c2aff96e03ce 701 SUPERFAMILY SSF158832 1 310 8.89E-92 T 22-04-2016 SMGD1_RS05650 0130c5e372ed5b16c250c2aff96e03ce 701 Gene3D G3DSA:3.30.420.140 315 439 1.4E-45 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 SMGD1_RS05650 0130c5e372ed5b16c250c2aff96e03ce 701 Gene3D G3DSA:1.10.150.310 488 607 2.2E-41 T 22-04-2016 IPR023097 Tex RuvX-like domain SMGD1_RS05650 0130c5e372ed5b16c250c2aff96e03ce 701 Pfam PF09371 Tex-like protein N-terminal domain 9 191 4.5E-56 T 22-04-2016 IPR018974 Tex-like protein, N-terminal SMGD1_RS05650 0130c5e372ed5b16c250c2aff96e03ce 701 Gene3D G3DSA:2.40.50.140 620 698 3.0E-20 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMGD1_RS05650 0130c5e372ed5b16c250c2aff96e03ce 701 Gene3D G3DSA:1.10.10.650 1 108 3.3E-34 T 22-04-2016 IPR023319 Tex-like protein, HTH domain SMGD1_RS05650 0130c5e372ed5b16c250c2aff96e03ce 701 SUPERFAMILY SSF50249 616 699 6.56E-17 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMGD1_RS05650 0130c5e372ed5b16c250c2aff96e03ce 701 SUPERFAMILY SSF47781 459 547 1.67E-27 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 SMGD1_RS05650 0130c5e372ed5b16c250c2aff96e03ce 701 SMART SM00732 315 413 2.4E-26 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 SMGD1_RS05650 0130c5e372ed5b16c250c2aff96e03ce 701 Pfam PF16921 Tex protein YqgF-like domain 316 439 1.9E-49 T 22-04-2016 IPR032639 Tex protein, YqgF-like domain SMGD1_RS05650 0130c5e372ed5b16c250c2aff96e03ce 701 PANTHER PTHR10724 1 697 2.1E-255 T 22-04-2016 SMGD1_RS05650 0130c5e372ed5b16c250c2aff96e03ce 701 Gene3D G3DSA:1.10.3500.10 110 311 8.0E-72 T 22-04-2016 IPR023323 Tex-like domain SMGD1_RS05650 0130c5e372ed5b16c250c2aff96e03ce 701 Gene3D G3DSA:1.10.3500.10 440 487 8.0E-72 T 22-04-2016 IPR023323 Tex-like domain SMGD1_RS05650 0130c5e372ed5b16c250c2aff96e03ce 701 Pfam PF12836 Helix-hairpin-helix motif 480 544 9.2E-29 T 22-04-2016 SMGD1_RS05650 0130c5e372ed5b16c250c2aff96e03ce 701 SUPERFAMILY SSF53098 311 458 4.93E-40 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMGD1_RS05650 0130c5e372ed5b16c250c2aff96e03ce 701 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 485 539 2.5E-16 T 22-04-2016 IPR004509 Competence protein ComEA, helix-hairpin-helix domain SMGD1_RS05650 0130c5e372ed5b16c250c2aff96e03ce 701 SMART SM00316 626 698 4.3E-17 T 22-04-2016 IPR022967 RNA-binding domain, S1 SMGD1_RS05650 0130c5e372ed5b16c250c2aff96e03ce 701 SMART SM00278 493 512 9.2 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 SMGD1_RS05650 0130c5e372ed5b16c250c2aff96e03ce 701 SMART SM00278 523 542 92.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 SMGD1_RS08000 e763664db81c602d03d0f99aa4954cbe 396 SUPERFAMILY SSF51905 120 262 2.02E-20 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS08000 e763664db81c602d03d0f99aa4954cbe 396 SUPERFAMILY SSF51905 1 152 1.16E-21 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS08000 e763664db81c602d03d0f99aa4954cbe 396 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 141 1.1E-13 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS08000 e763664db81c602d03d0f99aa4954cbe 396 PANTHER PTHR10632:SF8 3 396 1.7E-124 T 22-04-2016 SMGD1_RS08000 e763664db81c602d03d0f99aa4954cbe 396 Gene3D G3DSA:3.50.50.60 1 122 4.6E-39 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS08000 e763664db81c602d03d0f99aa4954cbe 396 Gene3D G3DSA:3.50.50.60 263 332 4.6E-39 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS08000 e763664db81c602d03d0f99aa4954cbe 396 PANTHER PTHR10632 3 396 1.7E-124 T 22-04-2016 SMGD1_RS08000 e763664db81c602d03d0f99aa4954cbe 396 Gene3D G3DSA:3.50.50.60 136 262 7.5E-6 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS14105 d1f42e7f5081ed4863511721bc98bb29 435 SUPERFAMILY SSF56300 366 427 1.82E-48 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SMGD1_RS14105 d1f42e7f5081ed4863511721bc98bb29 435 SUPERFAMILY SSF56300 127 332 1.82E-48 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SMGD1_RS14105 d1f42e7f5081ed4863511721bc98bb29 435 PANTHER PTHR22953 354 431 4.2E-49 T 22-04-2016 SMGD1_RS14105 d1f42e7f5081ed4863511721bc98bb29 435 PANTHER PTHR22953 85 336 4.2E-49 T 22-04-2016 SMGD1_RS14105 d1f42e7f5081ed4863511721bc98bb29 435 Gene3D G3DSA:3.60.21.10 124 430 1.9E-58 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SMGD1_RS14105 d1f42e7f5081ed4863511721bc98bb29 435 SUPERFAMILY SSF49363 31 118 9.81E-8 T 22-04-2016 IPR008963 Purple acid phosphatase-like, N-terminal GO:0003993|GO:0046872 SMGD1_RS14105 d1f42e7f5081ed4863511721bc98bb29 435 Pfam PF00149 Calcineurin-like phosphoesterase 127 326 5.8E-19 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 SMGD1_RS14105 d1f42e7f5081ed4863511721bc98bb29 435 Gene3D G3DSA:2.60.40.10 36 104 1.7E-5 T 22-04-2016 IPR013783 Immunoglobulin-like fold SMGD1_RS04410 38469fe2da7662618e868012007f5711 369 SUPERFAMILY SSF75620 29 363 4.97E-125 T 22-04-2016 SMGD1_RS04410 38469fe2da7662618e868012007f5711 369 PANTHER PTHR11075:SF6 25 369 2.1E-149 T 22-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 SMGD1_RS04410 38469fe2da7662618e868012007f5711 369 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 244 260 - T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 SMGD1_RS04410 38469fe2da7662618e868012007f5711 369 PANTHER PTHR11075 25 369 2.1E-149 T 22-04-2016 SMGD1_RS04410 38469fe2da7662618e868012007f5711 369 Pfam PF03462 PCRF domain 30 219 1.8E-58 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 SMGD1_RS04410 38469fe2da7662618e868012007f5711 369 Gene3D G3DSA:3.30.160.20 227 305 2.2E-35 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain SMGD1_RS04410 38469fe2da7662618e868012007f5711 369 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 1 362 2.2E-155 T 22-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 SMGD1_RS04410 38469fe2da7662618e868012007f5711 369 SMART SM00937 84 194 2.0E-53 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 SMGD1_RS04410 38469fe2da7662618e868012007f5711 369 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 2 363 37.573 T 22-04-2016 IPR020853 Peptide chain release factor 2, bacterial GO:0005737|GO:0006415|GO:0016149 SMGD1_RS04410 38469fe2da7662618e868012007f5711 369 Pfam PF00472 RF-1 domain 228 335 1.1E-38 T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 SMGD1_RS04410 38469fe2da7662618e868012007f5711 369 Gene3D G3DSA:1.20.58.410 1 115 1.7E-23 T 22-04-2016 SMGD1_RS03095 5557baa5760cec4b3e60047a986ee4bc 586 SUPERFAMILY SSF55073 409 514 8.63E-18 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS03095 5557baa5760cec4b3e60047a986ee4bc 586 Pfam PF00563 EAL domain 16 238 2.5E-48 T 22-04-2016 IPR001633 EAL domain SMGD1_RS03095 5557baa5760cec4b3e60047a986ee4bc 586 SMART SM00052 1 243 1.0E-27 T 22-04-2016 IPR001633 EAL domain SMGD1_RS03095 5557baa5760cec4b3e60047a986ee4bc 586 Gene3D G3DSA:3.10.580.10 275 397 2.6E-5 T 22-04-2016 SMGD1_RS03095 5557baa5760cec4b3e60047a986ee4bc 586 SUPERFAMILY SSF141868 17 239 7.72E-57 T 22-04-2016 IPR001633 EAL domain SMGD1_RS03095 5557baa5760cec4b3e60047a986ee4bc 586 PANTHER PTHR33121 1 275 2.8E-39 T 22-04-2016 SMGD1_RS03095 5557baa5760cec4b3e60047a986ee4bc 586 Pfam PF00990 Diguanylate cyclase, GGDEF domain 408 512 3.7E-13 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS03095 5557baa5760cec4b3e60047a986ee4bc 586 PANTHER PTHR33121:SF10 1 275 2.8E-39 T 22-04-2016 SMGD1_RS03095 5557baa5760cec4b3e60047a986ee4bc 586 Gene3D G3DSA:3.20.20.450 15 239 4.2E-53 T 22-04-2016 IPR001633 EAL domain SMGD1_RS03095 5557baa5760cec4b3e60047a986ee4bc 586 SUPERFAMILY SSF54631 275 395 1.03E-6 T 22-04-2016 SMGD1_RS03095 5557baa5760cec4b3e60047a986ee4bc 586 Gene3D G3DSA:3.30.70.270 407 547 1.0E-17 T 22-04-2016 SMGD1_RS03095 5557baa5760cec4b3e60047a986ee4bc 586 SMART SM00267 393 546 1.8E-5 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS03095 5557baa5760cec4b3e60047a986ee4bc 586 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 416 506 3.0E-12 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS00930 15c6267ad778627d10c4b3a41b291fd8 705 Pfam PF00378 Enoyl-CoA hydratase/isomerase 16 206 1.9E-36 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 SMGD1_RS00930 15c6267ad778627d10c4b3a41b291fd8 705 Gene3D G3DSA:1.10.1040.10 620 697 9.6E-16 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 SMGD1_RS00930 15c6267ad778627d10c4b3a41b291fd8 705 SUPERFAMILY SSF48179 494 593 1.02E-31 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SMGD1_RS00930 15c6267ad778627d10c4b3a41b291fd8 705 Gene3D G3DSA:3.90.226.10 2 206 6.4E-60 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SMGD1_RS00930 15c6267ad778627d10c4b3a41b291fd8 705 SUPERFAMILY SSF51735 315 492 1.97E-48 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS00930 15c6267ad778627d10c4b3a41b291fd8 705 PANTHER PTHR23309 4 701 1.8E-230 T 22-04-2016 SMGD1_RS00930 15c6267ad778627d10c4b3a41b291fd8 705 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 315 491 2.3E-55 T 22-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 SMGD1_RS00930 15c6267ad778627d10c4b3a41b291fd8 705 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 491 515 - T 22-04-2016 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 SMGD1_RS00930 15c6267ad778627d10c4b3a41b291fd8 705 SUPERFAMILY SSF48179 611 701 5.19E-22 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SMGD1_RS00930 15c6267ad778627d10c4b3a41b291fd8 705 Gene3D G3DSA:1.10.1040.10 496 588 5.2E-30 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 SMGD1_RS00930 15c6267ad778627d10c4b3a41b291fd8 705 SUPERFAMILY SSF52096 3 299 4.02E-64 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SMGD1_RS00930 15c6267ad778627d10c4b3a41b291fd8 705 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 494 587 9.7E-30 T 22-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 SMGD1_RS00930 15c6267ad778627d10c4b3a41b291fd8 705 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 613 694 3.6E-5 T 22-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 SMGD1_RS00930 15c6267ad778627d10c4b3a41b291fd8 705 Gene3D G3DSA:3.40.50.720 307 495 2.2E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS04250 b6503e2ceec583e02e207cd0af804185 154 SUPERFAMILY SSF46565 15 54 1.15E-10 T 22-04-2016 IPR001623 DnaJ domain SMGD1_RS04250 b6503e2ceec583e02e207cd0af804185 154 Gene3D G3DSA:1.10.287.110 17 47 3.0E-10 T 22-04-2016 IPR001623 DnaJ domain SMGD1_RS04250 b6503e2ceec583e02e207cd0af804185 154 Gene3D G3DSA:3.40.50.360 48 149 6.2E-4 T 22-04-2016 IPR029039 Flavoprotein-like domain SMGD1_RS13375 a044100720840de0236a9200e2064de5 762 SUPERFAMILY SSF50715 337 542 2.77E-63 T 22-04-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 SMGD1_RS13375 a044100720840de0236a9200e2064de5 762 Gene3D G3DSA:2.40.240.10 345 458 1.5E-42 T 22-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 SMGD1_RS13375 a044100720840de0236a9200e2064de5 762 SUPERFAMILY SSF89095 637 761 8.76E-23 T 22-04-2016 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 SMGD1_RS13375 a044100720840de0236a9200e2064de5 762 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 30 41 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMGD1_RS13375 a044100720840de0236a9200e2064de5 762 SMART SM00845 606 761 2.0E-55 T 22-04-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 SMGD1_RS13375 a044100720840de0236a9200e2064de5 762 PRINTS PR00987 Glutamyl-tRNA synthetase signature 41 52 4.5E-8 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 SMGD1_RS13375 a044100720840de0236a9200e2064de5 762 PRINTS PR00987 Glutamyl-tRNA synthetase signature 27 39 4.5E-8 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 SMGD1_RS13375 a044100720840de0236a9200e2064de5 762 PRINTS PR00987 Glutamyl-tRNA synthetase signature 56 69 4.5E-8 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 SMGD1_RS13375 a044100720840de0236a9200e2064de5 762 PRINTS PR00987 Glutamyl-tRNA synthetase signature 206 216 4.5E-8 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 SMGD1_RS13375 a044100720840de0236a9200e2064de5 762 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 24 545 3.5E-213 T 22-04-2016 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18 SMGD1_RS13375 a044100720840de0236a9200e2064de5 762 Gene3D G3DSA:2.40.240.10 459 541 7.8E-28 T 22-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 SMGD1_RS13375 a044100720840de0236a9200e2064de5 762 PANTHER PTHR11451:SF29 264 577 7.4E-211 T 22-04-2016 SMGD1_RS13375 a044100720840de0236a9200e2064de5 762 PANTHER PTHR11451:SF29 6 243 7.4E-211 T 22-04-2016 SMGD1_RS13375 a044100720840de0236a9200e2064de5 762 Pfam PF02637 GatB domain 627 761 2.7E-40 T 22-04-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 SMGD1_RS13375 a044100720840de0236a9200e2064de5 762 Gene3D G3DSA:1.10.1160.10 259 335 1.4E-35 T 22-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 SMGD1_RS13375 a044100720840de0236a9200e2064de5 762 SUPERFAMILY SSF52374 10 335 1.36E-94 T 22-04-2016 SMGD1_RS13375 a044100720840de0236a9200e2064de5 762 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 338 522 6.6E-55 T 22-04-2016 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: REACT_71 SMGD1_RS13375 a044100720840de0236a9200e2064de5 762 Gene3D G3DSA:3.40.50.620 24 92 9.6E-39 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMGD1_RS13375 a044100720840de0236a9200e2064de5 762 Gene3D G3DSA:3.40.50.620 208 258 9.6E-39 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMGD1_RS13375 a044100720840de0236a9200e2064de5 762 Gene3D G3DSA:3.90.800.10 97 205 4.7E-43 T 22-04-2016 SMGD1_RS13375 a044100720840de0236a9200e2064de5 762 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 23 334 5.5E-107 T 22-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 SMGD1_RS13375 a044100720840de0236a9200e2064de5 762 PANTHER PTHR11451 264 577 7.4E-211 T 22-04-2016 SMGD1_RS13375 a044100720840de0236a9200e2064de5 762 PANTHER PTHR11451 6 243 7.4E-211 T 22-04-2016 SMGD1_RS03710 4951be499b6c4fb76158879ca4b072f2 402 PANTHER PTHR11482:SF5 1 402 2.1E-158 T 22-04-2016 SMGD1_RS03710 4951be499b6c4fb76158879ca4b072f2 402 SUPERFAMILY SSF51419 12 267 7.03E-76 T 22-04-2016 IPR029066 PLP-binding barrel SMGD1_RS03710 4951be499b6c4fb76158879ca4b072f2 402 Gene3D G3DSA:2.40.37.10 253 397 1.1E-54 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 SMGD1_RS03710 4951be499b6c4fb76158879ca4b072f2 402 SUPERFAMILY SSF50621 238 396 6.91E-56 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 SMGD1_RS03710 4951be499b6c4fb76158879ca4b072f2 402 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 271 373 9.1E-19 T 22-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 SMGD1_RS03710 4951be499b6c4fb76158879ca4b072f2 402 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 20 266 4.1E-59 T 22-04-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 SMGD1_RS03710 4951be499b6c4fb76158879ca4b072f2 402 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 211 226 - T 22-04-2016 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site Reactome: REACT_13 SMGD1_RS03710 4951be499b6c4fb76158879ca4b072f2 402 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 2 396 6.5E-156 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SMGD1_RS03710 4951be499b6c4fb76158879ca4b072f2 402 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 2 397 41.465 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SMGD1_RS03710 4951be499b6c4fb76158879ca4b072f2 402 PANTHER PTHR11482 1 402 2.1E-158 T 22-04-2016 SMGD1_RS03710 4951be499b6c4fb76158879ca4b072f2 402 PRINTS PR01181 Diaminopimelate decarboxylase signature 60 77 2.1E-29 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SMGD1_RS03710 4951be499b6c4fb76158879ca4b072f2 402 PRINTS PR01181 Diaminopimelate decarboxylase signature 364 386 2.1E-29 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SMGD1_RS03710 4951be499b6c4fb76158879ca4b072f2 402 PRINTS PR01181 Diaminopimelate decarboxylase signature 149 158 2.1E-29 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SMGD1_RS03710 4951be499b6c4fb76158879ca4b072f2 402 PRINTS PR01181 Diaminopimelate decarboxylase signature 283 301 2.1E-29 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SMGD1_RS03710 4951be499b6c4fb76158879ca4b072f2 402 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 175 188 2.0E-24 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 SMGD1_RS03710 4951be499b6c4fb76158879ca4b072f2 402 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 42 60 2.0E-24 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 SMGD1_RS03710 4951be499b6c4fb76158879ca4b072f2 402 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 62 74 2.0E-24 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 SMGD1_RS03710 4951be499b6c4fb76158879ca4b072f2 402 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 354 367 2.0E-24 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 SMGD1_RS03710 4951be499b6c4fb76158879ca4b072f2 402 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 255 274 2.0E-24 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 SMGD1_RS03710 4951be499b6c4fb76158879ca4b072f2 402 Gene3D G3DSA:3.20.20.10 21 252 1.7E-75 T 22-04-2016 IPR029066 PLP-binding barrel SMGD1_RS10645 31d31c036b83083b017abaf968e6f1c5 431 PANTHER PTHR30341 278 431 2.1E-139 T 22-04-2016 SMGD1_RS10645 31d31c036b83083b017abaf968e6f1c5 431 PANTHER PTHR30341 7 244 2.1E-139 T 22-04-2016 SMGD1_RS10645 31d31c036b83083b017abaf968e6f1c5 431 Gene3D G3DSA:1.20.1530.10 7 245 1.6E-139 T 22-04-2016 IPR023171 Na/H antiporter domain SMGD1_RS10645 31d31c036b83083b017abaf968e6f1c5 431 Gene3D G3DSA:1.20.1530.10 289 423 1.6E-139 T 22-04-2016 IPR023171 Na/H antiporter domain SMGD1_RS10645 31d31c036b83083b017abaf968e6f1c5 431 PANTHER PTHR30341:SF0 278 431 2.1E-139 T 22-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 SMGD1_RS10645 31d31c036b83083b017abaf968e6f1c5 431 PANTHER PTHR30341:SF0 7 244 2.1E-139 T 22-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 SMGD1_RS10645 31d31c036b83083b017abaf968e6f1c5 431 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 11 419 1.5E-130 T 22-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 SMGD1_RS10645 31d31c036b83083b017abaf968e6f1c5 431 Pfam PF06965 Na+/H+ antiporter 1 10 419 4.1E-139 T 22-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 SMGD1_RS10645 31d31c036b83083b017abaf968e6f1c5 431 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 8 427 21.803 T 22-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 SMGD1_RS07965 3a37279beeee2786dafd9e60aaba71ff 444 Gene3D G3DSA:3.10.580.10 151 250 2.8E-20 T 22-04-2016 SMGD1_RS07965 3a37279beeee2786dafd9e60aaba71ff 444 SMART SM00267 275 444 7.7E-51 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS07965 3a37279beeee2786dafd9e60aaba71ff 444 Gene3D G3DSA:3.10.580.10 2 126 8.3E-14 T 22-04-2016 SMGD1_RS07965 3a37279beeee2786dafd9e60aaba71ff 444 SUPERFAMILY SSF54631 132 251 9.91E-20 T 22-04-2016 SMGD1_RS07965 3a37279beeee2786dafd9e60aaba71ff 444 SUPERFAMILY SSF55073 291 443 2.82E-43 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS07965 3a37279beeee2786dafd9e60aaba71ff 444 Pfam PF00990 Diguanylate cyclase, GGDEF domain 287 440 5.5E-46 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS07965 3a37279beeee2786dafd9e60aaba71ff 444 PANTHER PTHR10799 320 442 1.8E-24 T 22-04-2016 SMGD1_RS07965 3a37279beeee2786dafd9e60aaba71ff 444 PANTHER PTHR10799 24 195 1.8E-24 T 22-04-2016 SMGD1_RS07965 3a37279beeee2786dafd9e60aaba71ff 444 Gene3D G3DSA:3.30.70.270 288 443 2.0E-49 T 22-04-2016 SMGD1_RS07965 3a37279beeee2786dafd9e60aaba71ff 444 PANTHER PTHR10799:SF710 320 442 1.8E-24 T 22-04-2016 SMGD1_RS07965 3a37279beeee2786dafd9e60aaba71ff 444 PANTHER PTHR10799:SF710 24 195 1.8E-24 T 22-04-2016 SMGD1_RS07965 3a37279beeee2786dafd9e60aaba71ff 444 SMART SM00116 14 62 0.3 T 22-04-2016 IPR000644 CBS domain SMGD1_RS07965 3a37279beeee2786dafd9e60aaba71ff 444 SMART SM00116 206 254 0.49 T 22-04-2016 IPR000644 CBS domain SMGD1_RS07965 3a37279beeee2786dafd9e60aaba71ff 444 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 283 443 8.5E-49 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS07965 3a37279beeee2786dafd9e60aaba71ff 444 SUPERFAMILY SSF54631 5 124 1.52E-15 T 22-04-2016 SMGD1_RS07965 3a37279beeee2786dafd9e60aaba71ff 444 Pfam PF00571 CBS domain 7 59 1.4E-4 T 22-04-2016 IPR000644 CBS domain SMGD1_RS07965 3a37279beeee2786dafd9e60aaba71ff 444 Pfam PF00571 CBS domain 200 252 1.1E-7 T 22-04-2016 IPR000644 CBS domain SMGD1_RS08945 a7736090385cce550b9b95bddb768a51 237 Gene3D G3DSA:3.20.20.70 1 232 4.6E-64 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMGD1_RS08945 a7736090385cce550b9b95bddb768a51 237 ProSitePatterns PS00171 Triosephosphate isomerase active site. 155 165 - T 22-04-2016 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 SMGD1_RS08945 a7736090385cce550b9b95bddb768a51 237 SUPERFAMILY SSF51351 2 230 4.32E-63 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 SMGD1_RS08945 a7736090385cce550b9b95bddb768a51 237 Pfam PF00121 Triosephosphate isomerase 2 226 7.2E-60 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 SMGD1_RS08945 a7736090385cce550b9b95bddb768a51 237 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 1 230 28.78 T 22-04-2016 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 SMGD1_RS08945 a7736090385cce550b9b95bddb768a51 237 PANTHER PTHR21139 1 227 3.9E-57 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 SMGD1_RS14190 74218dcc42274eed71b29d020f956d70 487 Pfam PF02926 THUMP domain 73 170 4.2E-19 T 22-04-2016 IPR004114 THUMP domain GO:0003723 SMGD1_RS14190 74218dcc42274eed71b29d020f956d70 487 PANTHER PTHR14911 11 425 2.6E-150 T 22-04-2016 SMGD1_RS14190 74218dcc42274eed71b29d020f956d70 487 Gene3D G3DSA:3.40.50.620 181 341 6.1E-33 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMGD1_RS14190 74218dcc42274eed71b29d020f956d70 487 PANTHER PTHR14911:SF15 11 425 2.6E-150 T 22-04-2016 SMGD1_RS14190 74218dcc42274eed71b29d020f956d70 487 SUPERFAMILY SSF143437 10 181 1.74E-39 T 22-04-2016 SMGD1_RS14190 74218dcc42274eed71b29d020f956d70 487 TIGRFAM TIGR04271 ThiI_C_thiazole: thiazole biosynthesis domain 391 486 1.7E-29 T 22-04-2016 IPR026340 Thiazole biosynthesis domain GO:0052837 UniPathway: UPA00060 SMGD1_RS14190 74218dcc42274eed71b29d020f956d70 487 Gene3D G3DSA:3.40.250.10 404 482 6.8E-9 T 22-04-2016 IPR001763 Rhodanese-like domain SMGD1_RS14190 74218dcc42274eed71b29d020f956d70 487 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 12 385 2.4E-90 T 22-04-2016 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 UniPathway: UPA00060 SMGD1_RS14190 74218dcc42274eed71b29d020f956d70 487 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 183 376 3.2E-56 T 22-04-2016 IPR020536 Thil, AANH domain GO:0004810 UniPathway: UPA00060 SMGD1_RS14190 74218dcc42274eed71b29d020f956d70 487 SUPERFAMILY SSF52821 405 478 8.92E-9 T 22-04-2016 IPR001763 Rhodanese-like domain SMGD1_RS14190 74218dcc42274eed71b29d020f956d70 487 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 487 159.363 T 22-04-2016 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 UniPathway: UPA00060 SMGD1_RS14190 74218dcc42274eed71b29d020f956d70 487 SUPERFAMILY SSF52402 182 380 1.08E-38 T 22-04-2016 SMGD1_RS14190 74218dcc42274eed71b29d020f956d70 487 SMART SM00981 82 173 1.1E-20 T 22-04-2016 IPR004114 THUMP domain GO:0003723 SMGD1_RS06010 af9b8601dce674933f79382d9a103326 355 Gene3D G3DSA:3.30.160.20 207 284 5.1E-34 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain SMGD1_RS06010 af9b8601dce674933f79382d9a103326 355 Gene3D G3DSA:1.20.58.410 5 89 4.5E-19 T 22-04-2016 SMGD1_RS06010 af9b8601dce674933f79382d9a103326 355 PANTHER PTHR11075:SF9 1 353 9.8E-163 T 22-04-2016 SMGD1_RS06010 af9b8601dce674933f79382d9a103326 355 Pfam PF03462 PCRF domain 11 200 7.7E-71 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 SMGD1_RS06010 af9b8601dce674933f79382d9a103326 355 SUPERFAMILY SSF75620 10 349 5.62E-132 T 22-04-2016 SMGD1_RS06010 af9b8601dce674933f79382d9a103326 355 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 2 354 39.718 T 22-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 SMGD1_RS06010 af9b8601dce674933f79382d9a103326 355 Pfam PF00472 RF-1 domain 208 317 2.9E-40 T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 SMGD1_RS06010 af9b8601dce674933f79382d9a103326 355 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 224 240 - T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 SMGD1_RS06010 af9b8601dce674933f79382d9a103326 355 PANTHER PTHR11075 1 353 9.8E-163 T 22-04-2016 SMGD1_RS06010 af9b8601dce674933f79382d9a103326 355 SMART SM00937 64 175 2.7E-61 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 SMGD1_RS06010 af9b8601dce674933f79382d9a103326 355 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 3 351 4.6E-159 T 22-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 SMGD1_RS05530 f0f035447cd1d466c151b54b53ffe23c 710 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 102 705 7.9E-174 T 22-04-2016 SMGD1_RS05530 f0f035447cd1d466c151b54b53ffe23c 710 SUPERFAMILY SSF81665 162 197 3.4E-12 T 22-04-2016 SMGD1_RS05530 f0f035447cd1d466c151b54b53ffe23c 710 SUPERFAMILY SSF81665 644 662 3.4E-12 T 22-04-2016 SMGD1_RS05530 f0f035447cd1d466c151b54b53ffe23c 710 SUPERFAMILY SSF81665 295 390 3.4E-12 T 22-04-2016 SMGD1_RS05530 f0f035447cd1d466c151b54b53ffe23c 710 PANTHER PTHR24093 35 708 8.1E-224 T 22-04-2016 SMGD1_RS05530 f0f035447cd1d466c151b54b53ffe23c 710 Pfam PF00122 E1-E2 ATPase 164 387 1.9E-63 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SMGD1_RS05530 f0f035447cd1d466c151b54b53ffe23c 710 SUPERFAMILY SSF56784 453 702 2.77E-53 T 22-04-2016 IPR023214 HAD-like domain SMGD1_RS05530 f0f035447cd1d466c151b54b53ffe23c 710 SUPERFAMILY SSF56784 395 414 2.77E-53 T 22-04-2016 IPR023214 HAD-like domain SMGD1_RS05530 f0f035447cd1d466c151b54b53ffe23c 710 PRINTS PR00943 Copper-transporting ATPase signature 105 124 4.5E-9 T 22-04-2016 SMGD1_RS05530 f0f035447cd1d466c151b54b53ffe23c 710 PRINTS PR00943 Copper-transporting ATPase signature 317 331 4.5E-9 T 22-04-2016 SMGD1_RS05530 f0f035447cd1d466c151b54b53ffe23c 710 PRINTS PR00943 Copper-transporting ATPase signature 379 394 4.5E-9 T 22-04-2016 SMGD1_RS05530 f0f035447cd1d466c151b54b53ffe23c 710 PRINTS PR00943 Copper-transporting ATPase signature 183 201 4.5E-9 T 22-04-2016 SMGD1_RS05530 f0f035447cd1d466c151b54b53ffe23c 710 PRINTS PR00943 Copper-transporting ATPase signature 572 589 4.5E-9 T 22-04-2016 SMGD1_RS05530 f0f035447cd1d466c151b54b53ffe23c 710 PRINTS PR00943 Copper-transporting ATPase signature 163 182 4.5E-9 T 22-04-2016 SMGD1_RS05530 f0f035447cd1d466c151b54b53ffe23c 710 Pfam PF00702 haloacid dehalogenase-like hydrolase 393 609 2.0E-42 T 22-04-2016 SMGD1_RS05530 f0f035447cd1d466c151b54b53ffe23c 710 SUPERFAMILY SSF81653 203 294 1.03E-25 T 22-04-2016 SMGD1_RS05530 f0f035447cd1d466c151b54b53ffe23c 710 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 165 673 1.2E-85 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 SMGD1_RS05530 f0f035447cd1d466c151b54b53ffe23c 710 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 398 404 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site SMGD1_RS05530 f0f035447cd1d466c151b54b53ffe23c 710 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 595 614 2.4E-24 T 22-04-2016 SMGD1_RS05530 f0f035447cd1d466c151b54b53ffe23c 710 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 396 410 2.4E-24 T 22-04-2016 SMGD1_RS05530 f0f035447cd1d466c151b54b53ffe23c 710 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 618 630 2.4E-24 T 22-04-2016 SMGD1_RS05530 f0f035447cd1d466c151b54b53ffe23c 710 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 244 258 2.4E-24 T 22-04-2016 SMGD1_RS05530 f0f035447cd1d466c151b54b53ffe23c 710 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 542 552 2.4E-24 T 22-04-2016 SMGD1_RS05530 f0f035447cd1d466c151b54b53ffe23c 710 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 120 704 1.4E-183 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 SMGD1_RS05530 f0f035447cd1d466c151b54b53ffe23c 710 Gene3D G3DSA:2.70.150.10 138 294 1.1E-30 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SMGD1_RS05530 f0f035447cd1d466c151b54b53ffe23c 710 Gene3D G3DSA:3.40.1110.10 410 522 1.4E-19 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 SMGD1_RS05530 f0f035447cd1d466c151b54b53ffe23c 710 PANTHER PTHR24093:SF50 35 708 8.1E-224 T 22-04-2016 SMGD1_RS05530 f0f035447cd1d466c151b54b53ffe23c 710 Gene3D G3DSA:3.40.50.1000 523 663 1.3E-54 T 22-04-2016 IPR023214 HAD-like domain SMGD1_RS05530 f0f035447cd1d466c151b54b53ffe23c 710 Gene3D G3DSA:3.40.50.1000 367 409 1.3E-54 T 22-04-2016 IPR023214 HAD-like domain SMGD1_RS01165 9ade33b5689e2fe56eb0b0f288e9849f 125 SUPERFAMILY SSF51069 31 109 1.44E-6 T 22-04-2016 IPR001148 Alpha carbonic anhydrase SMGD1_RS01545 ecab25b1b174ef4366e12e1a6d7cf6cb 481 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 7 446 1.4E-188 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 SMGD1_RS01545 ecab25b1b174ef4366e12e1a6d7cf6cb 481 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 7 481 84.207 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 SMGD1_RS01545 ecab25b1b174ef4366e12e1a6d7cf6cb 481 PANTHER PTHR11911 1 277 1.1E-232 T 22-04-2016 SMGD1_RS01545 ecab25b1b174ef4366e12e1a6d7cf6cb 481 PANTHER PTHR11911 295 479 1.1E-232 T 22-04-2016 SMGD1_RS01545 ecab25b1b174ef4366e12e1a6d7cf6cb 481 PANTHER PTHR11911:SF6 1 277 1.1E-232 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 SMGD1_RS01545 ecab25b1b174ef4366e12e1a6d7cf6cb 481 PANTHER PTHR11911:SF6 295 479 1.1E-232 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 SMGD1_RS01545 ecab25b1b174ef4366e12e1a6d7cf6cb 481 PIRSF PIRSF000130 1 481 7.4E-205 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 SMGD1_RS01545 ecab25b1b174ef4366e12e1a6d7cf6cb 481 Pfam PF00571 CBS domain 150 204 1.0E-8 T 22-04-2016 IPR000644 CBS domain SMGD1_RS01545 ecab25b1b174ef4366e12e1a6d7cf6cb 481 Pfam PF00571 CBS domain 95 139 6.2E-10 T 22-04-2016 IPR000644 CBS domain SMGD1_RS01545 ecab25b1b174ef4366e12e1a6d7cf6cb 481 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 7 468 2.8E-161 T 22-04-2016 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Reactome: REACT_1698 SMGD1_RS01545 ecab25b1b174ef4366e12e1a6d7cf6cb 481 SUPERFAMILY SSF54631 64 204 2.02E-30 T 22-04-2016 SMGD1_RS01545 ecab25b1b174ef4366e12e1a6d7cf6cb 481 SUPERFAMILY SSF51412 2 89 9.62E-121 T 22-04-2016 SMGD1_RS01545 ecab25b1b174ef4366e12e1a6d7cf6cb 481 SUPERFAMILY SSF51412 215 472 9.62E-121 T 22-04-2016 SMGD1_RS01545 ecab25b1b174ef4366e12e1a6d7cf6cb 481 Gene3D G3DSA:3.20.20.70 3 480 6.7E-197 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMGD1_RS01545 ecab25b1b174ef4366e12e1a6d7cf6cb 481 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 290 302 - T 22-04-2016 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 Reactome: REACT_1698 SMGD1_RS01545 ecab25b1b174ef4366e12e1a6d7cf6cb 481 SMART SM00116 95 143 5.5E-10 T 22-04-2016 IPR000644 CBS domain SMGD1_RS01545 ecab25b1b174ef4366e12e1a6d7cf6cb 481 SMART SM00116 156 204 1.2E-4 T 22-04-2016 IPR000644 CBS domain SMGD1_RS01545 ecab25b1b174ef4366e12e1a6d7cf6cb 481 SMART SM01240 6 468 0.0 T 22-04-2016 SMGD1_RS08285 41f13d51889e7e83154d8b33f16e9bef 233 PANTHER PTHR30183 1 221 1.4E-56 T 22-04-2016 SMGD1_RS08285 41f13d51889e7e83154d8b33f16e9bef 233 SUPERFAMILY SSF161098 12 218 7.46E-45 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMGD1_RS08285 41f13d51889e7e83154d8b33f16e9bef 233 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 14 222 9.4E-70 T 22-04-2016 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 SMGD1_RS08285 41f13d51889e7e83154d8b33f16e9bef 233 Gene3D G3DSA:1.10.3720.10 14 225 1.6E-38 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMGD1_RS08285 41f13d51889e7e83154d8b33f16e9bef 233 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 221 2.1E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMGD1_RS02615 e65b31e670303cb4df0447f515bd6bde 403 PRINTS PR00662 Glucose-6-phosphate isomerase signature 235 256 3.0E-15 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 SMGD1_RS02615 e65b31e670303cb4df0447f515bd6bde 403 PRINTS PR00662 Glucose-6-phosphate isomerase signature 377 390 3.0E-15 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 SMGD1_RS02615 e65b31e670303cb4df0447f515bd6bde 403 PRINTS PR00662 Glucose-6-phosphate isomerase signature 52 71 3.0E-15 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 SMGD1_RS02615 e65b31e670303cb4df0447f515bd6bde 403 PRINTS PR00662 Glucose-6-phosphate isomerase signature 158 176 3.0E-15 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 SMGD1_RS02615 e65b31e670303cb4df0447f515bd6bde 403 Gene3D G3DSA:3.40.50.10490 160 386 2.9E-68 T 22-04-2016 SMGD1_RS02615 e65b31e670303cb4df0447f515bd6bde 403 SUPERFAMILY SSF53697 8 402 2.75E-94 T 22-04-2016 SMGD1_RS02615 e65b31e670303cb4df0447f515bd6bde 403 PANTHER PTHR11469 50 399 2.7E-69 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 SMGD1_RS02615 e65b31e670303cb4df0447f515bd6bde 403 Gene3D G3DSA:3.40.50.10490 47 159 1.1E-29 T 22-04-2016 SMGD1_RS02615 e65b31e670303cb4df0447f515bd6bde 403 PANTHER PTHR11469:SF1 50 399 2.7E-69 T 22-04-2016 SMGD1_RS02615 e65b31e670303cb4df0447f515bd6bde 403 Pfam PF00342 Phosphoglucose isomerase 48 398 1.7E-30 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 SMGD1_RS13755 d50345c7f58a8cefa0bc4115ef1ea595 471 PIRSF PIRSF002457 1 471 6.8E-144 T 22-04-2016 IPR030676 Citrate carrier CitT-related SMGD1_RS13755 d50345c7f58a8cefa0bc4115ef1ea595 471 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 29 466 1.8E-101 T 22-04-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 SMGD1_RS13755 d50345c7f58a8cefa0bc4115ef1ea595 471 PANTHER PTHR10283:SF13 5 470 1.4E-142 T 22-04-2016 IPR030676 Citrate carrier CitT-related SMGD1_RS13755 d50345c7f58a8cefa0bc4115ef1ea595 471 PANTHER PTHR10283 5 470 1.4E-142 T 22-04-2016 SMGD1_RS13755 d50345c7f58a8cefa0bc4115ef1ea595 471 Pfam PF00939 Sodium:sulfate symporter transmembrane region 13 469 1.2E-113 T 22-04-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 SMGD1_RS11125 0e125d433e242624565226c1253d8699 126 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 101 119 - T 22-04-2016 IPR019897 RidA, conserved site SMGD1_RS11125 0e125d433e242624565226c1253d8699 126 SUPERFAMILY SSF55298 2 125 7.54E-45 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like SMGD1_RS11125 0e125d433e242624565226c1253d8699 126 Gene3D G3DSA:3.30.1330.40 3 125 1.2E-46 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like SMGD1_RS11125 0e125d433e242624565226c1253d8699 126 PANTHER PTHR11803 1 125 1.0E-50 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family SMGD1_RS11125 0e125d433e242624565226c1253d8699 126 Pfam PF01042 Endoribonuclease L-PSP 7 124 7.4E-42 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family SMGD1_RS11125 0e125d433e242624565226c1253d8699 126 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 1 124 1.6E-48 T 22-04-2016 IPR006056 RidA family SMGD1_RS02520 f74a8b214ca38b351a65b233c56ab214 182 Gene3D G3DSA:3.40.630.30 2 175 2.6E-33 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMGD1_RS02520 f74a8b214ca38b351a65b233c56ab214 182 PANTHER PTHR13256 2 175 5.2E-33 T 22-04-2016 SMGD1_RS02520 f74a8b214ca38b351a65b233c56ab214 182 Pfam PF13302 Acetyltransferase (GNAT) domain 9 148 8.1E-21 T 22-04-2016 IPR000182 GNAT domain GO:0008080 SMGD1_RS02520 f74a8b214ca38b351a65b233c56ab214 182 SUPERFAMILY SSF55729 3 172 1.25E-33 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMGD1_RS02300 2b863216fc51156b0076977d0ae9ac65 270 PANTHER PTHR32552 1 263 9.7E-63 T 22-04-2016 SMGD1_RS02300 2b863216fc51156b0076977d0ae9ac65 270 Pfam PF13276 HTH-like domain 23 78 3.2E-16 T 22-04-2016 IPR025948 HTH-like domain SMGD1_RS02300 2b863216fc51156b0076977d0ae9ac65 270 SUPERFAMILY SSF53098 96 262 5.18E-42 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMGD1_RS02300 2b863216fc51156b0076977d0ae9ac65 270 Gene3D G3DSA:3.30.420.10 100 256 6.5E-35 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMGD1_RS02300 2b863216fc51156b0076977d0ae9ac65 270 Pfam PF00665 Integrase core domain 104 217 7.3E-32 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SMGD1_RS02495 2b863216fc51156b0076977d0ae9ac65 270 PANTHER PTHR32552 1 263 9.7E-63 T 22-04-2016 SMGD1_RS02495 2b863216fc51156b0076977d0ae9ac65 270 Pfam PF13276 HTH-like domain 23 78 3.2E-16 T 22-04-2016 IPR025948 HTH-like domain SMGD1_RS02495 2b863216fc51156b0076977d0ae9ac65 270 SUPERFAMILY SSF53098 96 262 5.18E-42 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMGD1_RS02495 2b863216fc51156b0076977d0ae9ac65 270 Gene3D G3DSA:3.30.420.10 100 256 6.5E-35 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMGD1_RS02495 2b863216fc51156b0076977d0ae9ac65 270 Pfam PF00665 Integrase core domain 104 217 7.3E-32 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SMGD1_RS06105 04d5a99bdb34b52ce086fca603c66012 310 PANTHER PTHR30477 5 303 5.2E-55 T 22-04-2016 SMGD1_RS06105 04d5a99bdb34b52ce086fca603c66012 310 Gene3D G3DSA:3.40.50.1980 32 187 3.2E-42 T 22-04-2016 SMGD1_RS06105 04d5a99bdb34b52ce086fca603c66012 310 PRINTS PR00690 Adhesin family signature 66 79 7.6E-18 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 SMGD1_RS06105 04d5a99bdb34b52ce086fca603c66012 310 PRINTS PR00690 Adhesin family signature 35 53 7.6E-18 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 SMGD1_RS06105 04d5a99bdb34b52ce086fca603c66012 310 PRINTS PR00690 Adhesin family signature 79 96 7.6E-18 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 SMGD1_RS06105 04d5a99bdb34b52ce086fca603c66012 310 PRINTS PR00690 Adhesin family signature 193 214 7.6E-18 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 SMGD1_RS06105 04d5a99bdb34b52ce086fca603c66012 310 PRINTS PR00690 Adhesin family signature 246 264 7.6E-18 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 SMGD1_RS06105 04d5a99bdb34b52ce086fca603c66012 310 PRINTS PR00691 Adhesin B signature 137 156 5.2E-17 T 22-04-2016 IPR006129 Adhesin B GO:0007155 SMGD1_RS06105 04d5a99bdb34b52ce086fca603c66012 310 PRINTS PR00691 Adhesin B signature 193 210 5.2E-17 T 22-04-2016 IPR006129 Adhesin B GO:0007155 SMGD1_RS06105 04d5a99bdb34b52ce086fca603c66012 310 PRINTS PR00691 Adhesin B signature 79 98 5.2E-17 T 22-04-2016 IPR006129 Adhesin B GO:0007155 SMGD1_RS06105 04d5a99bdb34b52ce086fca603c66012 310 PRINTS PR00691 Adhesin B signature 286 304 5.2E-17 T 22-04-2016 IPR006129 Adhesin B GO:0007155 SMGD1_RS06105 04d5a99bdb34b52ce086fca603c66012 310 PRINTS PR00691 Adhesin B signature 35 56 5.2E-17 T 22-04-2016 IPR006129 Adhesin B GO:0007155 SMGD1_RS06105 04d5a99bdb34b52ce086fca603c66012 310 PRINTS PR00691 Adhesin B signature 60 78 5.2E-17 T 22-04-2016 IPR006129 Adhesin B GO:0007155 SMGD1_RS06105 04d5a99bdb34b52ce086fca603c66012 310 PRINTS PR00691 Adhesin B signature 242 259 5.2E-17 T 22-04-2016 IPR006129 Adhesin B GO:0007155 SMGD1_RS06105 04d5a99bdb34b52ce086fca603c66012 310 Pfam PF01297 Zinc-uptake complex component A periplasmic 38 306 8.1E-62 T 22-04-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 SMGD1_RS06105 04d5a99bdb34b52ce086fca603c66012 310 Gene3D G3DSA:3.40.50.1980 188 307 1.2E-34 T 22-04-2016 SMGD1_RS06105 04d5a99bdb34b52ce086fca603c66012 310 PANTHER PTHR30477:SF1 5 303 5.2E-55 T 22-04-2016 SMGD1_RS06105 04d5a99bdb34b52ce086fca603c66012 310 SUPERFAMILY SSF53807 34 307 1.18E-70 T 22-04-2016 SMGD1_RS03540 8f3dc6a9a80cd63b93a5c15517fc990f 461 Gene3D G3DSA:3.40.50.2300 2 131 1.2E-37 T 22-04-2016 SMGD1_RS03540 8f3dc6a9a80cd63b93a5c15517fc990f 461 Gene3D G3DSA:3.30.450.20 159 256 3.7E-26 T 22-04-2016 SMGD1_RS03540 8f3dc6a9a80cd63b93a5c15517fc990f 461 SUPERFAMILY SSF52172 3 152 3.7E-36 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS03540 8f3dc6a9a80cd63b93a5c15517fc990f 461 PANTHER PTHR26402:SF495 5 137 1.8E-35 T 22-04-2016 SMGD1_RS03540 8f3dc6a9a80cd63b93a5c15517fc990f 461 PANTHER PTHR26402:SF495 324 455 1.8E-35 T 22-04-2016 SMGD1_RS03540 8f3dc6a9a80cd63b93a5c15517fc990f 461 SMART SM00448 5 119 1.7E-32 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS03540 8f3dc6a9a80cd63b93a5c15517fc990f 461 Pfam PF00072 Response regulator receiver domain 7 119 1.7E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS03540 8f3dc6a9a80cd63b93a5c15517fc990f 461 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 148 262 9.6E-16 T 22-04-2016 IPR000014 PAS domain SMGD1_RS03540 8f3dc6a9a80cd63b93a5c15517fc990f 461 SMART SM00471 282 419 7.0E-6 T 22-04-2016 IPR003607 HD/PDEase domain SMGD1_RS03540 8f3dc6a9a80cd63b93a5c15517fc990f 461 Gene3D G3DSA:1.10.3210.10 267 442 1.0E-18 T 22-04-2016 IPR006674 HD domain SMGD1_RS03540 8f3dc6a9a80cd63b93a5c15517fc990f 461 Pfam PF01966 HD domain 287 409 2.6E-16 T 22-04-2016 IPR006674 HD domain SMGD1_RS03540 8f3dc6a9a80cd63b93a5c15517fc990f 461 Pfam PF13426 PAS domain 159 256 2.6E-13 T 22-04-2016 IPR000014 PAS domain SMGD1_RS03540 8f3dc6a9a80cd63b93a5c15517fc990f 461 SMART SM00086 215 257 3.3E-5 T 22-04-2016 IPR001610 PAC motif SMGD1_RS03540 8f3dc6a9a80cd63b93a5c15517fc990f 461 PANTHER PTHR26402 5 137 1.8E-35 T 22-04-2016 SMGD1_RS03540 8f3dc6a9a80cd63b93a5c15517fc990f 461 PANTHER PTHR26402 324 455 1.8E-35 T 22-04-2016 SMGD1_RS03540 8f3dc6a9a80cd63b93a5c15517fc990f 461 SUPERFAMILY SSF55785 155 254 5.93E-28 T 22-04-2016 IPR000014 PAS domain SMGD1_RS03540 8f3dc6a9a80cd63b93a5c15517fc990f 461 SUPERFAMILY SSF109604 277 450 1.13E-37 T 22-04-2016 SMGD1_RS09155 c8721a59a68ff4b4c35a4bf4a1f2b4e7 133 Pfam PF01627 Hpt domain 21 109 1.4E-6 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SMGD1_RS09155 c8721a59a68ff4b4c35a4bf4a1f2b4e7 133 Gene3D G3DSA:1.20.120.160 11 116 2.7E-17 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SMGD1_RS09155 c8721a59a68ff4b4c35a4bf4a1f2b4e7 133 SUPERFAMILY SSF47226 11 118 2.09E-18 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SMGD1_RS04305 94af22d7d1c71d12c59a66537e2e1ade 333 SUPERFAMILY SSF50621 210 333 2.44E-25 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 SMGD1_RS04305 94af22d7d1c71d12c59a66537e2e1ade 333 SMART SM01005 222 333 5.0E-23 T 22-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SMGD1_RS04305 94af22d7d1c71d12c59a66537e2e1ade 333 SUPERFAMILY SSF51419 7 217 1.03E-32 T 22-04-2016 IPR029066 PLP-binding barrel SMGD1_RS04305 94af22d7d1c71d12c59a66537e2e1ade 333 Gene3D G3DSA:2.40.37.10 207 333 1.7E-26 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 SMGD1_RS04305 94af22d7d1c71d12c59a66537e2e1ade 333 PRINTS PR00992 Alanine racemase signature 238 253 8.2E-13 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SMGD1_RS04305 94af22d7d1c71d12c59a66537e2e1ade 333 PRINTS PR00992 Alanine racemase signature 255 270 8.2E-13 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SMGD1_RS04305 94af22d7d1c71d12c59a66537e2e1ade 333 PRINTS PR00992 Alanine racemase signature 141 152 8.2E-13 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SMGD1_RS04305 94af22d7d1c71d12c59a66537e2e1ade 333 PRINTS PR00992 Alanine racemase signature 25 41 8.2E-13 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SMGD1_RS04305 94af22d7d1c71d12c59a66537e2e1ade 333 Pfam PF00842 Alanine racemase, C-terminal domain 222 331 2.6E-20 T 22-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SMGD1_RS04305 94af22d7d1c71d12c59a66537e2e1ade 333 Hamap MF_01201 Alanine racemase. 6 333 19.535 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SMGD1_RS04305 94af22d7d1c71d12c59a66537e2e1ade 333 Gene3D G3DSA:3.20.20.10 10 206 1.5E-35 T 22-04-2016 IPR029066 PLP-binding barrel SMGD1_RS04305 94af22d7d1c71d12c59a66537e2e1ade 333 PANTHER PTHR30511:SF0 1 333 7.8E-46 T 22-04-2016 SMGD1_RS04305 94af22d7d1c71d12c59a66537e2e1ade 333 PANTHER PTHR30511 1 333 7.8E-46 T 22-04-2016 SMGD1_RS04305 94af22d7d1c71d12c59a66537e2e1ade 333 Pfam PF01168 Alanine racemase, N-terminal domain 7 212 1.4E-32 T 22-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SMGD1_RS02045 efee8fdef4a169e3283457f2b649da14 328 Pfam PF13379 NMT1-like family 24 288 4.7E-83 T 22-04-2016 SMGD1_RS02045 efee8fdef4a169e3283457f2b649da14 328 PANTHER PTHR30024 159 296 1.4E-84 T 22-04-2016 SMGD1_RS02045 efee8fdef4a169e3283457f2b649da14 328 PANTHER PTHR30024 23 131 1.4E-84 T 22-04-2016 SMGD1_RS02045 efee8fdef4a169e3283457f2b649da14 328 Gene3D G3DSA:3.40.190.10 166 266 1.1E-7 T 22-04-2016 SMGD1_RS02045 efee8fdef4a169e3283457f2b649da14 328 PANTHER PTHR30024:SF7 159 296 1.4E-84 T 22-04-2016 SMGD1_RS02045 efee8fdef4a169e3283457f2b649da14 328 PANTHER PTHR30024:SF7 23 131 1.4E-84 T 22-04-2016 SMGD1_RS02045 efee8fdef4a169e3283457f2b649da14 328 SUPERFAMILY SSF53850 25 127 1.03E-29 T 22-04-2016 SMGD1_RS02045 efee8fdef4a169e3283457f2b649da14 328 SUPERFAMILY SSF53850 159 279 1.03E-29 T 22-04-2016 SMGD1_RS12465 c845d58da02f94ea0bef2fbc73a95483 489 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 379 485 1.4E-14 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS12465 c845d58da02f94ea0bef2fbc73a95483 489 PANTHER PTHR24423 260 485 1.7E-31 T 22-04-2016 SMGD1_RS12465 c845d58da02f94ea0bef2fbc73a95483 489 SMART SM00387 375 487 3.5E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS12465 c845d58da02f94ea0bef2fbc73a95483 489 PRINTS PR00344 Bacterial sensor protein C-terminal signature 416 430 1.8E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS12465 c845d58da02f94ea0bef2fbc73a95483 489 PRINTS PR00344 Bacterial sensor protein C-terminal signature 447 465 1.8E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS12465 c845d58da02f94ea0bef2fbc73a95483 489 PRINTS PR00344 Bacterial sensor protein C-terminal signature 471 484 1.8E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS12465 c845d58da02f94ea0bef2fbc73a95483 489 PRINTS PR00344 Bacterial sensor protein C-terminal signature 434 444 1.8E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS12465 c845d58da02f94ea0bef2fbc73a95483 489 PANTHER PTHR24423:SF485 260 485 1.7E-31 T 22-04-2016 SMGD1_RS12465 c845d58da02f94ea0bef2fbc73a95483 489 SUPERFAMILY SSF47384 260 326 2.55E-5 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS12465 c845d58da02f94ea0bef2fbc73a95483 489 Gene3D G3DSA:3.30.565.10 339 486 3.0E-26 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS12465 c845d58da02f94ea0bef2fbc73a95483 489 SUPERFAMILY SSF55874 334 485 1.7E-27 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS11920 bbe86ba20fb1731b21cf8e7cfefe2e99 190 PANTHER PTHR34406 7 188 1.8E-43 T 22-04-2016 SMGD1_RS11920 bbe86ba20fb1731b21cf8e7cfefe2e99 190 SMART SM00867 22 187 5.2E-56 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like SMGD1_RS11920 bbe86ba20fb1731b21cf8e7cfefe2e99 190 Gene3D G3DSA:2.40.128.110 22 188 2.9E-48 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like SMGD1_RS11920 bbe86ba20fb1731b21cf8e7cfefe2e99 190 PANTHER PTHR34406:SF1 7 188 1.8E-43 T 22-04-2016 SMGD1_RS11920 bbe86ba20fb1731b21cf8e7cfefe2e99 190 Pfam PF04264 YceI-like domain 23 185 4.9E-35 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like SMGD1_RS11920 bbe86ba20fb1731b21cf8e7cfefe2e99 190 SUPERFAMILY SSF101874 21 188 7.72E-44 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like SMGD1_RS11115 0602c13ba1ef59c3435069a21021020c 365 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 1 365 43.205 T 22-04-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18|UniPathway: UPA00034 SMGD1_RS11115 0602c13ba1ef59c3435069a21021020c 365 PANTHER PTHR11014 3 364 1.7E-64 T 22-04-2016 SMGD1_RS11115 0602c13ba1ef59c3435069a21021020c 365 SUPERFAMILY SSF53187 3 170 4.1E-57 T 22-04-2016 SMGD1_RS11115 0602c13ba1ef59c3435069a21021020c 365 SUPERFAMILY SSF53187 283 364 4.1E-57 T 22-04-2016 SMGD1_RS11115 0602c13ba1ef59c3435069a21021020c 365 Gene3D G3DSA:3.30.70.360 180 273 1.9E-21 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain SMGD1_RS11115 0602c13ba1ef59c3435069a21021020c 365 SUPERFAMILY SSF55031 171 273 2.69E-21 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain SMGD1_RS11115 0602c13ba1ef59c3435069a21021020c 365 Pfam PF07687 Peptidase dimerisation domain 167 265 3.5E-13 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain SMGD1_RS11115 0602c13ba1ef59c3435069a21021020c 365 Pfam PF01546 Peptidase family M20/M25/M40 60 362 7.7E-41 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 SMGD1_RS11115 0602c13ba1ef59c3435069a21021020c 365 Gene3D G3DSA:3.40.630.10 307 364 3.0E-64 T 22-04-2016 SMGD1_RS11115 0602c13ba1ef59c3435069a21021020c 365 Gene3D G3DSA:3.40.630.10 3 179 3.0E-64 T 22-04-2016 SMGD1_RS11115 0602c13ba1ef59c3435069a21021020c 365 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 93 127 - T 22-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 SMGD1_RS11115 0602c13ba1ef59c3435069a21021020c 365 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 4 363 1.3E-131 T 22-04-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18|UniPathway: UPA00034 SMGD1_RS05450 0554a3bae2642a3fdf23fa6a5f1fbca0 215 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 7 181 7.9E-11 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SMGD1_RS05450 0554a3bae2642a3fdf23fa6a5f1fbca0 215 Gene3D G3DSA:3.40.50.1000 89 212 6.0E-30 T 22-04-2016 IPR023214 HAD-like domain SMGD1_RS05450 0554a3bae2642a3fdf23fa6a5f1fbca0 215 Gene3D G3DSA:3.40.50.1000 3 18 6.0E-30 T 22-04-2016 IPR023214 HAD-like domain SMGD1_RS05450 0554a3bae2642a3fdf23fa6a5f1fbca0 215 SUPERFAMILY SSF56784 5 211 1.3E-38 T 22-04-2016 IPR023214 HAD-like domain SMGD1_RS05450 0554a3bae2642a3fdf23fa6a5f1fbca0 215 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 184 1.9E-27 T 22-04-2016 IPR023214 HAD-like domain SMGD1_RS05450 0554a3bae2642a3fdf23fa6a5f1fbca0 215 PANTHER PTHR18901 7 211 8.4E-38 T 22-04-2016 SMGD1_RS03700 543bec5d10366311c282d92ded33771e 362 Gene3D G3DSA:3.40.190.10 88 175 2.9E-29 T 22-04-2016 SMGD1_RS03700 543bec5d10366311c282d92ded33771e 362 SUPERFAMILY SSF55021 262 355 3.73E-18 T 22-04-2016 SMGD1_RS03700 543bec5d10366311c282d92ded33771e 362 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 243 265 - T 22-04-2016 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 SMGD1_RS03700 543bec5d10366311c282d92ded33771e 362 TIGRFAM TIGR01807 CM_P2: chorismate mutase 4 80 6.7E-24 T 22-04-2016 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626|UniPathway: UPA00120|UniPathway: UPA00121 SMGD1_RS03700 543bec5d10366311c282d92ded33771e 362 PIRSF PIRSF001500 1 362 8.0E-120 T 22-04-2016 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 SMGD1_RS03700 543bec5d10366311c282d92ded33771e 362 PANTHER PTHR21022:SF0 4 355 9.3E-96 T 22-04-2016 SMGD1_RS03700 543bec5d10366311c282d92ded33771e 362 Gene3D G3DSA:3.30.70.260 274 355 4.2E-21 T 22-04-2016 SMGD1_RS03700 543bec5d10366311c282d92ded33771e 362 PANTHER PTHR21022 4 355 9.3E-96 T 22-04-2016 SMGD1_RS03700 543bec5d10366311c282d92ded33771e 362 Pfam PF01817 Chorismate mutase type II 8 87 1.4E-24 T 22-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 SMGD1_RS03700 543bec5d10366311c282d92ded33771e 362 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 307 314 - T 22-04-2016 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 SMGD1_RS03700 543bec5d10366311c282d92ded33771e 362 SUPERFAMILY SSF48600 1 88 7.48E-21 T 22-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 SMGD1_RS03700 543bec5d10366311c282d92ded33771e 362 Gene3D G3DSA:3.40.190.10 176 255 1.4E-24 T 22-04-2016 SMGD1_RS03700 543bec5d10366311c282d92ded33771e 362 Pfam PF00800 Prephenate dehydratase 92 267 9.3E-58 T 22-04-2016 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 SMGD1_RS03700 543bec5d10366311c282d92ded33771e 362 SMART SM00830 8 90 3.6E-28 T 22-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 SMGD1_RS03700 543bec5d10366311c282d92ded33771e 362 SUPERFAMILY SSF53850 91 272 2.61E-52 T 22-04-2016 SMGD1_RS03700 543bec5d10366311c282d92ded33771e 362 Gene3D G3DSA:1.20.59.10 1 87 1.3E-23 T 22-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 SMGD1_RS07205 9cd893544d7104007bbd9bac0dbab932 1191 Gene3D G3DSA:3.40.309.10 768 959 3.0E-38 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 SMGD1_RS07205 9cd893544d7104007bbd9bac0dbab932 1191 Gene3D G3DSA:3.40.605.10 522 767 4.8E-55 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 SMGD1_RS07205 9cd893544d7104007bbd9bac0dbab932 1191 SUPERFAMILY SSF51730 129 469 1.53E-64 T 22-04-2016 IPR029041 FAD-linked oxidoreductase-like SMGD1_RS07205 9cd893544d7104007bbd9bac0dbab932 1191 PIRSF PIRSF000197 1 1188 3.6E-302 T 22-04-2016 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 SMGD1_RS07205 9cd893544d7104007bbd9bac0dbab932 1191 PANTHER PTHR11699:SF15 545 979 7.8E-118 T 22-04-2016 SMGD1_RS07205 9cd893544d7104007bbd9bac0dbab932 1191 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 752 759 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 SMGD1_RS07205 9cd893544d7104007bbd9bac0dbab932 1191 Pfam PF00171 Aldehyde dehydrogenase family 538 978 1.4E-107 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 SMGD1_RS07205 9cd893544d7104007bbd9bac0dbab932 1191 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 780 791 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 SMGD1_RS07205 9cd893544d7104007bbd9bac0dbab932 1191 SUPERFAMILY SSF53720 515 979 3.4E-100 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 SMGD1_RS07205 9cd893544d7104007bbd9bac0dbab932 1191 Pfam PF01619 Proline dehydrogenase 132 430 4.0E-57 T 22-04-2016 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|UniPathway: UPA00261 SMGD1_RS07205 9cd893544d7104007bbd9bac0dbab932 1191 PANTHER PTHR11699 545 979 7.8E-118 T 22-04-2016 SMGD1_RS07205 9cd893544d7104007bbd9bac0dbab932 1191 Gene3D G3DSA:3.20.20.220 130 442 6.5E-60 T 22-04-2016 IPR029041 FAD-linked oxidoreductase-like SMGD1_RS11100 4acd149237fb65341b23d80be006f511 1010 SUPERFAMILY SSF48334 324 619 6.93E-35 T 22-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 SMGD1_RS11100 4acd149237fb65341b23d80be006f511 1010 SUPERFAMILY SSF53150 141 308 8.5E-9 T 22-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 SMGD1_RS11100 4acd149237fb65341b23d80be006f511 1010 Gene3D G3DSA:1.10.1420.10 305 484 3.5E-23 T 22-04-2016 SMGD1_RS11100 4acd149237fb65341b23d80be006f511 1010 Pfam PF01624 MutS domain I 33 138 8.7E-12 T 22-04-2016 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 SMGD1_RS11100 4acd149237fb65341b23d80be006f511 1010 PIRSF PIRSF037677 31 926 4.6E-82 T 22-04-2016 SMGD1_RS11100 4acd149237fb65341b23d80be006f511 1010 SMART SM00534 688 878 7.0E-53 T 22-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 SMGD1_RS11100 4acd149237fb65341b23d80be006f511 1010 SMART SM00533 323 649 3.7E-19 T 22-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 SMGD1_RS11100 4acd149237fb65341b23d80be006f511 1010 Gene3D G3DSA:3.40.1170.10 18 139 1.3E-18 T 22-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 SMGD1_RS11100 4acd149237fb65341b23d80be006f511 1010 SUPERFAMILY SSF55271 31 136 1.57E-14 T 22-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 SMGD1_RS11100 4acd149237fb65341b23d80be006f511 1010 Gene3D G3DSA:3.30.420.110 146 296 2.5E-5 T 22-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 SMGD1_RS11100 4acd149237fb65341b23d80be006f511 1010 Pfam PF00488 MutS domain V 692 880 2.8E-43 T 22-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 SMGD1_RS11100 4acd149237fb65341b23d80be006f511 1010 SUPERFAMILY SSF52540 631 881 1.54E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS11100 4acd149237fb65341b23d80be006f511 1010 PANTHER PTHR11361 35 664 7.2E-103 T 22-04-2016 SMGD1_RS11100 4acd149237fb65341b23d80be006f511 1010 PANTHER PTHR11361 687 889 7.2E-103 T 22-04-2016 SMGD1_RS11100 4acd149237fb65341b23d80be006f511 1010 Pfam PF05192 MutS domain III 312 611 2.0E-20 T 22-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 SMGD1_RS11100 4acd149237fb65341b23d80be006f511 1010 Gene3D G3DSA:3.40.50.300 624 880 9.4E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS09365 d0bd151b34ea32df9a67054462fdefdd 156 Gene3D G3DSA:3.90.79.10 4 151 1.6E-24 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SMGD1_RS09365 d0bd151b34ea32df9a67054462fdefdd 156 PANTHER PTHR11839:SF13 7 150 3.1E-29 T 22-04-2016 SMGD1_RS09365 d0bd151b34ea32df9a67054462fdefdd 156 SUPERFAMILY SSF55811 7 151 2.17E-23 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SMGD1_RS09365 d0bd151b34ea32df9a67054462fdefdd 156 Pfam PF00293 NUDIX domain 7 139 2.6E-18 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 SMGD1_RS09365 d0bd151b34ea32df9a67054462fdefdd 156 PANTHER PTHR11839 7 150 3.1E-29 T 22-04-2016 SMGD1_RS09365 d0bd151b34ea32df9a67054462fdefdd 156 PRINTS PR00502 NUDIX hydrolase family signature 52 67 2.3E-5 T 22-04-2016 IPR020476 NUDIX hydrolase SMGD1_RS09365 d0bd151b34ea32df9a67054462fdefdd 156 PRINTS PR00502 NUDIX hydrolase family signature 38 52 2.3E-5 T 22-04-2016 IPR020476 NUDIX hydrolase SMGD1_RS09365 d0bd151b34ea32df9a67054462fdefdd 156 ProSitePatterns PS00893 Nudix box signature. 43 64 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 SMGD1_RS09835 ef3f6ba394218a0c409b8c3031b8ae92 247 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 62 201 7.4E-8 T 22-04-2016 IPR010440 Lipopolysaccharide kinase GO:0005524|GO:0016020|GO:0016773 SMGD1_RS09835 ef3f6ba394218a0c409b8c3031b8ae92 247 SUPERFAMILY SSF56112 45 181 8.29E-7 T 22-04-2016 IPR011009 Protein kinase-like domain SMGD1_RS12290 6a16a284610adf3e41f8fc0703b837a0 214 SUPERFAMILY SSF46894 125 210 2.01E-13 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SMGD1_RS12290 6a16a284610adf3e41f8fc0703b837a0 214 SUPERFAMILY SSF52172 1 115 7.12E-32 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS12290 6a16a284610adf3e41f8fc0703b837a0 214 SMART SM00448 1 110 3.5E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS12290 6a16a284610adf3e41f8fc0703b837a0 214 Gene3D G3DSA:3.40.50.2300 1 116 1.0E-31 T 22-04-2016 SMGD1_RS12290 6a16a284610adf3e41f8fc0703b837a0 214 PANTHER PTHR26402 1 211 5.3E-41 T 22-04-2016 SMGD1_RS12290 6a16a284610adf3e41f8fc0703b837a0 214 Pfam PF00072 Response regulator receiver domain 1 110 2.1E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS12290 6a16a284610adf3e41f8fc0703b837a0 214 Pfam PF00486 Transcriptional regulatory protein, C terminal 144 210 9.5E-10 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMGD1_RS12290 6a16a284610adf3e41f8fc0703b837a0 214 SMART SM00862 141 210 2.5E-6 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMGD1_RS12290 6a16a284610adf3e41f8fc0703b837a0 214 Gene3D G3DSA:1.10.10.10 126 211 1.2E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMGD1_RS09285 ee6e23b93a2bc75a9f7189b2a6763d94 416 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 222 397 8.5E-33 T 22-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMGD1_RS09285 ee6e23b93a2bc75a9f7189b2a6763d94 416 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 416 38.736 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 SMGD1_RS09285 ee6e23b93a2bc75a9f7189b2a6763d94 416 Gene3D G3DSA:3.30.930.10 106 415 6.7E-132 T 22-04-2016 SMGD1_RS09285 ee6e23b93a2bc75a9f7189b2a6763d94 416 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 414 3.8E-165 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 SMGD1_RS09285 ee6e23b93a2bc75a9f7189b2a6763d94 416 Gene3D G3DSA:1.10.287.40 1 105 1.7E-15 T 22-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 SMGD1_RS09285 ee6e23b93a2bc75a9f7189b2a6763d94 416 SUPERFAMILY SSF55681 117 415 6.49E-94 T 22-04-2016 SMGD1_RS09285 ee6e23b93a2bc75a9f7189b2a6763d94 416 PIRSF PIRSF001529 1 416 4.5E-163 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 SMGD1_RS09285 ee6e23b93a2bc75a9f7189b2a6763d94 416 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 108 4.5E-21 T 22-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 SMGD1_RS09285 ee6e23b93a2bc75a9f7189b2a6763d94 416 PANTHER PTHR11778 1 416 2.0E-181 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 SMGD1_RS09285 ee6e23b93a2bc75a9f7189b2a6763d94 416 PRINTS PR00981 Seryl-tRNA synthetase signature 350 366 1.7E-29 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 SMGD1_RS09285 ee6e23b93a2bc75a9f7189b2a6763d94 416 PRINTS PR00981 Seryl-tRNA synthetase signature 332 348 1.7E-29 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 SMGD1_RS09285 ee6e23b93a2bc75a9f7189b2a6763d94 416 PRINTS PR00981 Seryl-tRNA synthetase signature 263 275 1.7E-29 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 SMGD1_RS09285 ee6e23b93a2bc75a9f7189b2a6763d94 416 PRINTS PR00981 Seryl-tRNA synthetase signature 315 328 1.7E-29 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 SMGD1_RS09285 ee6e23b93a2bc75a9f7189b2a6763d94 416 PRINTS PR00981 Seryl-tRNA synthetase signature 275 288 1.7E-29 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 SMGD1_RS09285 ee6e23b93a2bc75a9f7189b2a6763d94 416 PANTHER PTHR11778:SF0 1 416 2.0E-181 T 22-04-2016 SMGD1_RS09285 ee6e23b93a2bc75a9f7189b2a6763d94 416 SUPERFAMILY SSF46589 1 113 3.82E-21 T 22-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 SMGD1_RS06280 96a5a53716838c9cacee57c79e267079 125 Gene3D G3DSA:3.30.1130.10 13 123 8.6E-36 T 22-04-2016 SMGD1_RS06280 96a5a53716838c9cacee57c79e267079 125 Pfam PF14489 QueF-like protein 47 124 1.6E-30 T 22-04-2016 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 SMGD1_RS06280 96a5a53716838c9cacee57c79e267079 125 PIRSF PIRSF027377 1 125 2.4E-48 T 22-04-2016 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 SMGD1_RS06280 96a5a53716838c9cacee57c79e267079 125 SUPERFAMILY SSF55620 11 116 2.08E-28 T 22-04-2016 SMGD1_RS06280 96a5a53716838c9cacee57c79e267079 125 Hamap MF_00818 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 125 45.205 T 22-04-2016 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 SMGD1_RS06280 96a5a53716838c9cacee57c79e267079 125 TIGRFAM TIGR03139 QueF-II: 7-cyano-7-deazaguanine reductase 15 122 1.7E-39 T 22-04-2016 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 SMGD1_RS06280 96a5a53716838c9cacee57c79e267079 125 PANTHER PTHR34354 3 124 2.7E-41 T 22-04-2016 SMGD1_RS06280 96a5a53716838c9cacee57c79e267079 125 PANTHER PTHR34354:SF1 3 124 2.7E-41 T 22-04-2016 SMGD1_RS10430 c9a7e1064638e8d662e2d7b75f38a673 761 SUPERFAMILY SSF52172 517 636 2.42E-29 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS10430 c9a7e1064638e8d662e2d7b75f38a673 761 Pfam PF00072 Response regulator receiver domain 518 629 4.0E-18 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS10430 c9a7e1064638e8d662e2d7b75f38a673 761 Gene3D G3DSA:1.20.120.160 669 759 1.7E-27 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SMGD1_RS10430 c9a7e1064638e8d662e2d7b75f38a673 761 Gene3D G3DSA:1.10.287.130 151 206 3.5E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS10430 c9a7e1064638e8d662e2d7b75f38a673 761 SMART SM00388 156 221 4.8E-23 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS10430 c9a7e1064638e8d662e2d7b75f38a673 761 Pfam PF01627 Hpt domain 678 739 3.4E-10 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SMGD1_RS10430 c9a7e1064638e8d662e2d7b75f38a673 761 PANTHER PTHR24423 465 674 2.0E-127 T 22-04-2016 SMGD1_RS10430 c9a7e1064638e8d662e2d7b75f38a673 761 PANTHER PTHR24423 141 383 2.0E-127 T 22-04-2016 SMGD1_RS10430 c9a7e1064638e8d662e2d7b75f38a673 761 PANTHER PTHR24423:SF382 465 674 2.0E-127 T 22-04-2016 SMGD1_RS10430 c9a7e1064638e8d662e2d7b75f38a673 761 PANTHER PTHR24423:SF382 141 383 2.0E-127 T 22-04-2016 SMGD1_RS10430 c9a7e1064638e8d662e2d7b75f38a673 761 SUPERFAMILY SSF47384 140 222 1.41E-21 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS10430 c9a7e1064638e8d662e2d7b75f38a673 761 SMART SM00448 516 632 1.1E-21 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS10430 c9a7e1064638e8d662e2d7b75f38a673 761 SUPERFAMILY SSF55874 210 378 1.15E-44 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS10430 c9a7e1064638e8d662e2d7b75f38a673 761 SUPERFAMILY SSF47226 615 628 9.81E-18 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SMGD1_RS10430 c9a7e1064638e8d662e2d7b75f38a673 761 SUPERFAMILY SSF47226 657 751 9.81E-18 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SMGD1_RS10430 c9a7e1064638e8d662e2d7b75f38a673 761 PRINTS PR00344 Bacterial sensor protein C-terminal signature 305 319 1.8E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS10430 c9a7e1064638e8d662e2d7b75f38a673 761 PRINTS PR00344 Bacterial sensor protein C-terminal signature 364 377 1.8E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS10430 c9a7e1064638e8d662e2d7b75f38a673 761 PRINTS PR00344 Bacterial sensor protein C-terminal signature 340 358 1.8E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS10430 c9a7e1064638e8d662e2d7b75f38a673 761 PRINTS PR00344 Bacterial sensor protein C-terminal signature 323 333 1.8E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS10430 c9a7e1064638e8d662e2d7b75f38a673 761 Gene3D G3DSA:3.30.565.10 207 380 7.1E-43 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS10430 c9a7e1064638e8d662e2d7b75f38a673 761 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 269 378 2.0E-25 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS10430 c9a7e1064638e8d662e2d7b75f38a673 761 Pfam PF00512 His Kinase A (phospho-acceptor) domain 157 221 1.5E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS10430 c9a7e1064638e8d662e2d7b75f38a673 761 SMART SM00387 268 380 6.1E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS10430 c9a7e1064638e8d662e2d7b75f38a673 761 Gene3D G3DSA:3.40.50.2300 517 641 3.3E-33 T 22-04-2016 SMGD1_RS13185 d453778c1c53b4eb2850382c0482e20b 609 PRINTS PR01180 Arginine decarboxylase signature 516 537 9.1E-41 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SMGD1_RS13185 d453778c1c53b4eb2850382c0482e20b 609 PRINTS PR01180 Arginine decarboxylase signature 130 145 9.1E-41 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SMGD1_RS13185 d453778c1c53b4eb2850382c0482e20b 609 PRINTS PR01180 Arginine decarboxylase signature 51 66 9.1E-41 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SMGD1_RS13185 d453778c1c53b4eb2850382c0482e20b 609 PRINTS PR01180 Arginine decarboxylase signature 181 203 9.1E-41 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SMGD1_RS13185 d453778c1c53b4eb2850382c0482e20b 609 PRINTS PR01180 Arginine decarboxylase signature 442 463 9.1E-41 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SMGD1_RS13185 d453778c1c53b4eb2850382c0482e20b 609 PRINTS PR01180 Arginine decarboxylase signature 75 89 9.1E-41 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SMGD1_RS13185 d453778c1c53b4eb2850382c0482e20b 609 PRINTS PR01180 Arginine decarboxylase signature 467 492 9.1E-41 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SMGD1_RS13185 d453778c1c53b4eb2850382c0482e20b 609 PRINTS PR01180 Arginine decarboxylase signature 307 324 9.1E-41 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SMGD1_RS13185 d453778c1c53b4eb2850382c0482e20b 609 SUPERFAMILY SSF51419 52 329 3.55E-56 T 22-04-2016 IPR029066 PLP-binding barrel SMGD1_RS13185 d453778c1c53b4eb2850382c0482e20b 609 PIRSF PIRSF001336 1 608 1.6E-194 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SMGD1_RS13185 d453778c1c53b4eb2850382c0482e20b 609 Gene3D G3DSA:3.20.20.10 55 320 8.0E-52 T 22-04-2016 IPR029066 PLP-binding barrel SMGD1_RS13185 d453778c1c53b4eb2850382c0482e20b 609 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 432 535 6.6E-23 T 22-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 SMGD1_RS13185 d453778c1c53b4eb2850382c0482e20b 609 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 516 529 1.1E-17 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 SMGD1_RS13185 d453778c1c53b4eb2850382c0482e20b 609 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 107 119 1.1E-17 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 SMGD1_RS13185 d453778c1c53b4eb2850382c0482e20b 609 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 224 237 1.1E-17 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 SMGD1_RS13185 d453778c1c53b4eb2850382c0482e20b 609 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 317 336 1.1E-17 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 SMGD1_RS13185 d453778c1c53b4eb2850382c0482e20b 609 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 83 101 1.1E-17 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 SMGD1_RS13185 d453778c1c53b4eb2850382c0482e20b 609 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 78 328 1.4E-37 T 22-04-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 SMGD1_RS13185 d453778c1c53b4eb2850382c0482e20b 609 SUPERFAMILY SSF50621 430 544 1.78E-14 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 SMGD1_RS13185 d453778c1c53b4eb2850382c0482e20b 609 Gene3D G3DSA:2.40.37.10 321 340 1.5E-17 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 SMGD1_RS13185 d453778c1c53b4eb2850382c0482e20b 609 Gene3D G3DSA:2.40.37.10 433 551 1.5E-17 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 SMGD1_RS13185 d453778c1c53b4eb2850382c0482e20b 609 PANTHER PTHR11482 31 350 1.7E-141 T 22-04-2016 SMGD1_RS13185 d453778c1c53b4eb2850382c0482e20b 609 PANTHER PTHR11482 417 570 1.7E-141 T 22-04-2016 SMGD1_RS13185 d453778c1c53b4eb2850382c0482e20b 609 PANTHER PTHR11482:SF36 31 350 1.7E-141 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SMGD1_RS13185 d453778c1c53b4eb2850382c0482e20b 609 PANTHER PTHR11482:SF36 417 570 1.7E-141 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SMGD1_RS13185 d453778c1c53b4eb2850382c0482e20b 609 TIGRFAM TIGR01273 speA: arginine decarboxylase 2 606 1.1E-193 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SMGD1_RS05775 b0b7017d643ef90f87976e432579debe 156 PANTHER PTHR22960 3 156 2.8E-84 T 22-04-2016 SMGD1_RS05775 b0b7017d643ef90f87976e432579debe 156 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase accessory protein [moaC]. 1 156 32.368 T 22-04-2016 IPR023046 Molybdenum cofactor biosynthesis C, bacterial-type UniPathway: UPA00344 SMGD1_RS05775 b0b7017d643ef90f87976e432579debe 156 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 3 151 1.2E-54 T 22-04-2016 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 UniPathway: UPA00344 SMGD1_RS05775 b0b7017d643ef90f87976e432579debe 156 Gene3D G3DSA:3.30.70.640 2 156 1.6E-62 T 22-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 SMGD1_RS05775 b0b7017d643ef90f87976e432579debe 156 SUPERFAMILY SSF55040 11 154 4.18E-56 T 22-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 SMGD1_RS05775 b0b7017d643ef90f87976e432579debe 156 Pfam PF01967 MoaC family 14 149 1.5E-51 T 22-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 SMGD1_RS11805 81089fc20b6821aaac61ec7c4b31ac36 109 PANTHER PTHR10438 2 88 5.9E-14 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 SMGD1_RS11805 81089fc20b6821aaac61ec7c4b31ac36 109 Pfam PF00085 Thioredoxin 5 106 5.5E-14 T 22-04-2016 IPR013766 Thioredoxin domain GO:0045454 SMGD1_RS11805 81089fc20b6821aaac61ec7c4b31ac36 109 PANTHER PTHR10438:SF264 2 88 5.9E-14 T 22-04-2016 SMGD1_RS11805 81089fc20b6821aaac61ec7c4b31ac36 109 Gene3D G3DSA:3.40.30.10 3 107 1.6E-19 T 22-04-2016 IPR012336 Thioredoxin-like fold SMGD1_RS11805 81089fc20b6821aaac61ec7c4b31ac36 109 SUPERFAMILY SSF52833 3 107 3.66E-19 T 22-04-2016 IPR012336 Thioredoxin-like fold SMGD1_RS07045 57c9cbe508a72591b72847b96fa5a482 246 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 3 213 2.5E-48 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 SMGD1_RS07045 57c9cbe508a72591b72847b96fa5a482 246 SUPERFAMILY SSF53790 2 244 4.19E-76 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 SMGD1_RS07045 57c9cbe508a72591b72847b96fa5a482 246 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 2 236 2.9E-92 T 22-04-2016 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 SMGD1_RS07045 57c9cbe508a72591b72847b96fa5a482 246 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 82 115 - T 22-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 SMGD1_RS07045 57c9cbe508a72591b72847b96fa5a482 246 Gene3D G3DSA:3.30.950.10 118 244 5.5E-47 T 22-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 SMGD1_RS07045 57c9cbe508a72591b72847b96fa5a482 246 Gene3D G3DSA:3.40.1010.10 1 117 4.6E-41 T 22-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 SMGD1_RS07045 57c9cbe508a72591b72847b96fa5a482 246 PANTHER PTHR21091:SF16 1 217 2.9E-75 T 22-04-2016 SMGD1_RS07045 57c9cbe508a72591b72847b96fa5a482 246 PANTHER PTHR21091 1 217 2.9E-75 T 22-04-2016 SMGD1_RS01055 9e730a5870cfb70ceb0fffb55bf79a63 1492 PANTHER PTHR19871 6 1376 4.0E-128 T 22-04-2016 SMGD1_RS01055 9e730a5870cfb70ceb0fffb55bf79a63 1492 Gene3D G3DSA:2.130.10.10 1115 1379 5.8E-46 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 SMGD1_RS01055 9e730a5870cfb70ceb0fffb55bf79a63 1492 SUPERFAMILY SSF50978 962 1119 5.49E-39 T 22-04-2016 IPR017986 WD40-repeat-containing domain GO:0005515 SMGD1_RS01055 9e730a5870cfb70ceb0fffb55bf79a63 1492 SUPERFAMILY SSF50978 865 924 5.49E-39 T 22-04-2016 IPR017986 WD40-repeat-containing domain GO:0005515 SMGD1_RS01055 9e730a5870cfb70ceb0fffb55bf79a63 1492 Gene3D G3DSA:2.130.10.10 864 925 3.6E-41 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 SMGD1_RS01055 9e730a5870cfb70ceb0fffb55bf79a63 1492 Gene3D G3DSA:2.130.10.10 963 1111 3.6E-41 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 SMGD1_RS01055 9e730a5870cfb70ceb0fffb55bf79a63 1492 Pfam PF13271 Domain of unknown function (DUF4062) 6 97 5.9E-10 T 22-04-2016 IPR025139 Domain of unknown function DUF4062 SMGD1_RS01055 9e730a5870cfb70ceb0fffb55bf79a63 1492 SUPERFAMILY SSF52540 316 546 6.0E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS01055 9e730a5870cfb70ceb0fffb55bf79a63 1492 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 1051 1065 - T 22-04-2016 IPR019775 WD40 repeat, conserved site SMGD1_RS01055 9e730a5870cfb70ceb0fffb55bf79a63 1492 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 1141 1155 - T 22-04-2016 IPR019775 WD40 repeat, conserved site SMGD1_RS01055 9e730a5870cfb70ceb0fffb55bf79a63 1492 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 1183 1197 - T 22-04-2016 IPR019775 WD40 repeat, conserved site SMGD1_RS01055 9e730a5870cfb70ceb0fffb55bf79a63 1492 SUPERFAMILY SSF50978 1072 1379 3.89E-57 T 22-04-2016 IPR017986 WD40-repeat-containing domain GO:0005515 SMGD1_RS01055 9e730a5870cfb70ceb0fffb55bf79a63 1492 Gene3D G3DSA:3.40.50.300 312 468 3.9E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS01055 9e730a5870cfb70ceb0fffb55bf79a63 1492 SMART SM00320 1025 1064 8.9E-6 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS01055 9e730a5870cfb70ceb0fffb55bf79a63 1492 SMART SM00320 1280 1326 18.0 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS01055 9e730a5870cfb70ceb0fffb55bf79a63 1492 SMART SM00320 983 1022 5.1E-6 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS01055 9e730a5870cfb70ceb0fffb55bf79a63 1492 SMART SM00320 864 902 32.0 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS01055 9e730a5870cfb70ceb0fffb55bf79a63 1492 SMART SM00320 1329 1368 16.0 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS01055 9e730a5870cfb70ceb0fffb55bf79a63 1492 SMART SM00320 1199 1238 0.0016 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS01055 9e730a5870cfb70ceb0fffb55bf79a63 1492 SMART SM00320 1115 1154 2.8E-5 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS01055 9e730a5870cfb70ceb0fffb55bf79a63 1492 SMART SM00320 1157 1196 2.1E-7 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS01055 9e730a5870cfb70ceb0fffb55bf79a63 1492 SMART SM00320 1069 1108 1.5E-6 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS01055 9e730a5870cfb70ceb0fffb55bf79a63 1492 SMART SM00320 905 979 35.0 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS01055 9e730a5870cfb70ceb0fffb55bf79a63 1492 Pfam PF00400 WD domain, G-beta repeat 1075 1107 2.1E-4 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS01055 9e730a5870cfb70ceb0fffb55bf79a63 1492 Pfam PF00400 WD domain, G-beta repeat 992 1021 0.0011 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS01055 9e730a5870cfb70ceb0fffb55bf79a63 1492 Pfam PF00400 WD domain, G-beta repeat 1205 1235 0.0041 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS01055 9e730a5870cfb70ceb0fffb55bf79a63 1492 Pfam PF00400 WD domain, G-beta repeat 1162 1196 3.0E-5 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS01055 9e730a5870cfb70ceb0fffb55bf79a63 1492 Pfam PF00400 WD domain, G-beta repeat 1125 1154 0.0087 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS09160 e6cf615f3231e640733e53c7b30e229e 263 Gene3D G3DSA:3.20.20.60 3 263 2.6E-106 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SMGD1_RS09160 e6cf615f3231e640733e53c7b30e229e 263 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 5 263 39.043 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 SMGD1_RS09160 e6cf615f3231e640733e53c7b30e229e 263 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 3 263 2.8E-106 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 SMGD1_RS09160 e6cf615f3231e640733e53c7b30e229e 263 SUPERFAMILY SSF51621 4 263 2.36E-96 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SMGD1_RS09160 e6cf615f3231e640733e53c7b30e229e 263 PANTHER PTHR20881 3 263 7.1E-116 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 SMGD1_RS09160 e6cf615f3231e640733e53c7b30e229e 263 PIRSF PIRSF000388 1 263 5.7E-107 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 SMGD1_RS09160 e6cf615f3231e640733e53c7b30e229e 263 Pfam PF02548 Ketopantoate hydroxymethyltransferase 4 259 2.4E-103 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 SMGD1_RS03260 d0dc3ba82edd8250e8734a999a84e345 194 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 1 194 31.477 T 22-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 SMGD1_RS03260 d0dc3ba82edd8250e8734a999a84e345 194 Gene3D G3DSA:3.20.20.70 1 193 2.1E-57 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMGD1_RS03260 d0dc3ba82edd8250e8734a999a84e345 194 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 4 191 7.6E-39 T 22-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 SMGD1_RS03260 d0dc3ba82edd8250e8734a999a84e345 194 PANTHER PTHR22854 1 193 2.2E-46 T 22-04-2016 SMGD1_RS03260 d0dc3ba82edd8250e8734a999a84e345 194 PANTHER PTHR22854:SF6 1 193 2.2E-46 T 22-04-2016 SMGD1_RS03260 d0dc3ba82edd8250e8734a999a84e345 194 SUPERFAMILY SSF51366 1 193 2.83E-50 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 SMGD1_RS10785 0f5ecd195447e1b7fb9f539463cffa50 315 Gene3D G3DSA:1.10.8.300 195 312 7.3E-41 T 22-04-2016 SMGD1_RS10785 0f5ecd195447e1b7fb9f539463cffa50 315 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 35 165 2.2E-64 T 22-04-2016 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 SMGD1_RS10785 0f5ecd195447e1b7fb9f539463cffa50 315 PIRSF PIRSF002849 1 315 7.6E-131 T 22-04-2016 IPR016366 ATPase chaperone, AAA-type, MoxR, predicted SMGD1_RS10785 0f5ecd195447e1b7fb9f539463cffa50 315 PANTHER PTHR11603 1 315 3.2E-134 T 22-04-2016 SMGD1_RS10785 0f5ecd195447e1b7fb9f539463cffa50 315 Gene3D G3DSA:3.40.50.300 16 180 1.4E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS10785 0f5ecd195447e1b7fb9f539463cffa50 315 PANTHER PTHR11603:SF148 1 315 3.2E-134 T 22-04-2016 SMGD1_RS10785 0f5ecd195447e1b7fb9f539463cffa50 315 SUPERFAMILY SSF52540 5 287 1.42E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS12975 5a87346cf0a24307f6bde22db5f80a07 113 PRINTS PR00956 Flagellar motor switch protein FliN signature 46 62 2.3E-20 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 SMGD1_RS12975 5a87346cf0a24307f6bde22db5f80a07 113 PRINTS PR00956 Flagellar motor switch protein FliN signature 29 45 2.3E-20 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 SMGD1_RS12975 5a87346cf0a24307f6bde22db5f80a07 113 PRINTS PR00956 Flagellar motor switch protein FliN signature 75 90 2.3E-20 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 SMGD1_RS12975 5a87346cf0a24307f6bde22db5f80a07 113 PRINTS PR00956 Flagellar motor switch protein FliN signature 62 75 2.3E-20 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 SMGD1_RS12975 5a87346cf0a24307f6bde22db5f80a07 113 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 30 99 1.8E-21 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) SMGD1_RS12975 5a87346cf0a24307f6bde22db5f80a07 113 Gene3D G3DSA:2.30.330.10 20 108 2.5E-25 T 22-04-2016 SMGD1_RS12975 5a87346cf0a24307f6bde22db5f80a07 113 SUPERFAMILY SSF101801 27 103 5.49E-19 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) SMGD1_RS13885 46913f6f17d788359ecaa807ad5628d0 660 Pfam PF00593 TonB dependent receptor 421 657 1.1E-19 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMGD1_RS13885 46913f6f17d788359ecaa807ad5628d0 660 Pfam PF07715 TonB-dependent Receptor Plug Domain 26 130 1.3E-13 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMGD1_RS13885 46913f6f17d788359ecaa807ad5628d0 660 PANTHER PTHR32552 213 660 5.6E-16 T 22-04-2016 SMGD1_RS13885 46913f6f17d788359ecaa807ad5628d0 660 PANTHER PTHR32552 15 193 5.6E-16 T 22-04-2016 SMGD1_RS13885 46913f6f17d788359ecaa807ad5628d0 660 PANTHER PTHR32552:SF0 213 660 5.6E-16 T 22-04-2016 SMGD1_RS13885 46913f6f17d788359ecaa807ad5628d0 660 PANTHER PTHR32552:SF0 15 193 5.6E-16 T 22-04-2016 SMGD1_RS13885 46913f6f17d788359ecaa807ad5628d0 660 Gene3D G3DSA:2.170.130.10 9 132 4.1E-20 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMGD1_RS13885 46913f6f17d788359ecaa807ad5628d0 660 Gene3D G3DSA:2.40.170.20 133 660 3.6E-44 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMGD1_RS13885 46913f6f17d788359ecaa807ad5628d0 660 SUPERFAMILY SSF56935 16 660 7.33E-71 T 22-04-2016 SMGD1_RS12340 970ba8e3b9bfc565a3b1b195686b5837 412 SUPERFAMILY SSF160996 194 357 1.96E-28 T 22-04-2016 SMGD1_RS12340 970ba8e3b9bfc565a3b1b195686b5837 412 SUPERFAMILY SSF51905 354 408 6.38E-53 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS12340 970ba8e3b9bfc565a3b1b195686b5837 412 SUPERFAMILY SSF51905 3 195 6.38E-53 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS12340 970ba8e3b9bfc565a3b1b195686b5837 412 Pfam PF03486 HI0933-like protein 5 409 9.4E-113 T 22-04-2016 SMGD1_RS12340 970ba8e3b9bfc565a3b1b195686b5837 412 PANTHER PTHR10617 2 298 1.2E-82 T 22-04-2016 SMGD1_RS12340 970ba8e3b9bfc565a3b1b195686b5837 412 PANTHER PTHR10617 347 408 1.2E-82 T 22-04-2016 SMGD1_RS12340 970ba8e3b9bfc565a3b1b195686b5837 412 PANTHER PTHR10617:SF103 347 408 1.2E-82 T 22-04-2016 SMGD1_RS12340 970ba8e3b9bfc565a3b1b195686b5837 412 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 7 408 5.4E-132 T 22-04-2016 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like SMGD1_RS12340 970ba8e3b9bfc565a3b1b195686b5837 412 Gene3D G3DSA:2.40.30.10 193 287 1.6E-8 T 22-04-2016 SMGD1_RS12340 970ba8e3b9bfc565a3b1b195686b5837 412 PANTHER PTHR10617:SF103 2 298 1.2E-82 T 22-04-2016 SMGD1_RS12340 970ba8e3b9bfc565a3b1b195686b5837 412 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 1.2E-6 T 22-04-2016 SMGD1_RS12340 970ba8e3b9bfc565a3b1b195686b5837 412 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 157 175 1.2E-6 T 22-04-2016 SMGD1_RS12340 970ba8e3b9bfc565a3b1b195686b5837 412 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 6.2E-9 T 22-04-2016 SMGD1_RS12340 970ba8e3b9bfc565a3b1b195686b5837 412 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 160 169 6.2E-9 T 22-04-2016 SMGD1_RS12340 970ba8e3b9bfc565a3b1b195686b5837 412 Gene3D G3DSA:3.50.50.60 356 409 2.2E-49 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS12340 970ba8e3b9bfc565a3b1b195686b5837 412 Gene3D G3DSA:3.50.50.60 3 191 2.2E-49 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS12310 28c4c902eb3c45d9b565a3ee6df7f793 234 Pfam PF04055 Radical SAM superfamily 35 174 2.0E-16 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SMGD1_RS12310 28c4c902eb3c45d9b565a3ee6df7f793 234 SUPERFAMILY SSF102114 30 201 7.32E-25 T 22-04-2016 SMGD1_RS12310 28c4c902eb3c45d9b565a3ee6df7f793 234 PANTHER PTHR11228 1 204 7.5E-31 T 22-04-2016 SMGD1_RS12310 28c4c902eb3c45d9b565a3ee6df7f793 234 Gene3D G3DSA:3.20.20.70 32 208 5.9E-26 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMGD1_RS12310 28c4c902eb3c45d9b565a3ee6df7f793 234 Pfam PF13353 4Fe-4S single cluster domain 31 128 1.0E-12 T 22-04-2016 SMGD1_RS12310 28c4c902eb3c45d9b565a3ee6df7f793 234 TIGRFAM TIGR02495 NrdG2: anaerobic ribonucleoside-triphosphate reductase activating protein 16 203 9.7E-54 T 22-04-2016 IPR012840 Anaerobic ribonucleoside-triphosphate reductase activating protein SMGD1_RS12310 28c4c902eb3c45d9b565a3ee6df7f793 234 PANTHER PTHR11228:SF27 1 204 7.5E-31 T 22-04-2016 SMGD1_RS02585 bbd54efda1a5cd93911f4cc54e97d53b 566 PANTHER PTHR24221:SF138 27 563 2.0E-102 T 22-04-2016 SMGD1_RS02585 bbd54efda1a5cd93911f4cc54e97d53b 566 Pfam PF00005 ABC transporter 369 516 1.6E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMGD1_RS02585 bbd54efda1a5cd93911f4cc54e97d53b 566 Gene3D G3DSA:3.40.50.300 353 564 1.9E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS02585 bbd54efda1a5cd93911f4cc54e97d53b 566 ProSitePatterns PS00211 ABC transporters family signature. 488 502 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMGD1_RS02585 bbd54efda1a5cd93911f4cc54e97d53b 566 PANTHER PTHR24221 27 563 2.0E-102 T 22-04-2016 SMGD1_RS02585 bbd54efda1a5cd93911f4cc54e97d53b 566 SMART SM00382 378 562 2.1E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain SMGD1_RS02585 bbd54efda1a5cd93911f4cc54e97d53b 566 SUPERFAMILY SSF52540 348 564 9.86E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS02585 bbd54efda1a5cd93911f4cc54e97d53b 566 Pfam PF00664 ABC transporter transmembrane region 41 300 8.6E-14 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SMGD1_RS02585 bbd54efda1a5cd93911f4cc54e97d53b 566 SUPERFAMILY SSF90123 492 504 2.88E-30 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SMGD1_RS02585 bbd54efda1a5cd93911f4cc54e97d53b 566 SUPERFAMILY SSF90123 40 321 2.88E-30 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SMGD1_RS02585 bbd54efda1a5cd93911f4cc54e97d53b 566 Gene3D G3DSA:1.20.1560.10 13 321 4.4E-20 T 22-04-2016 SMGD1_RS12685 7771a4d35495fd7b202f662977ec4c54 252 PANTHER PTHR30050:SF6 1 240 9.0E-45 T 22-04-2016 SMGD1_RS12685 7771a4d35495fd7b202f662977ec4c54 252 SMART SM00382 99 237 7.9E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain SMGD1_RS12685 7771a4d35495fd7b202f662977ec4c54 252 Pfam PF01695 IstB-like ATP binding protein 54 231 1.1E-54 T 22-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 SMGD1_RS12685 7771a4d35495fd7b202f662977ec4c54 252 PANTHER PTHR30050 1 240 9.0E-45 T 22-04-2016 SMGD1_RS12685 7771a4d35495fd7b202f662977ec4c54 252 Gene3D G3DSA:3.40.50.300 54 232 1.7E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS12685 7771a4d35495fd7b202f662977ec4c54 252 SUPERFAMILY SSF52540 81 236 4.18E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS12685 7771a4d35495fd7b202f662977ec4c54 252 PIRSF PIRSF003073 1 249 2.0E-65 T 22-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein SMGD1_RS01020 7771a4d35495fd7b202f662977ec4c54 252 PANTHER PTHR30050:SF6 1 240 9.0E-45 T 22-04-2016 SMGD1_RS01020 7771a4d35495fd7b202f662977ec4c54 252 SMART SM00382 99 237 7.9E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain SMGD1_RS01020 7771a4d35495fd7b202f662977ec4c54 252 Pfam PF01695 IstB-like ATP binding protein 54 231 1.1E-54 T 22-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 SMGD1_RS01020 7771a4d35495fd7b202f662977ec4c54 252 PANTHER PTHR30050 1 240 9.0E-45 T 22-04-2016 SMGD1_RS01020 7771a4d35495fd7b202f662977ec4c54 252 Gene3D G3DSA:3.40.50.300 54 232 1.7E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS01020 7771a4d35495fd7b202f662977ec4c54 252 SUPERFAMILY SSF52540 81 236 4.18E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS01020 7771a4d35495fd7b202f662977ec4c54 252 PIRSF PIRSF003073 1 249 2.0E-65 T 22-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein SMGD1_RS13580 2210595127df3b8dbbf636795dcefcb3 798 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 542 653 2.6E-26 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS13580 2210595127df3b8dbbf636795dcefcb3 798 SUPERFAMILY SSF52172 677 795 3.84E-37 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS13580 2210595127df3b8dbbf636795dcefcb3 798 PRINTS PR00344 Bacterial sensor protein C-terminal signature 581 595 3.2E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS13580 2210595127df3b8dbbf636795dcefcb3 798 PRINTS PR00344 Bacterial sensor protein C-terminal signature 599 609 3.2E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS13580 2210595127df3b8dbbf636795dcefcb3 798 PRINTS PR00344 Bacterial sensor protein C-terminal signature 616 634 3.2E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS13580 2210595127df3b8dbbf636795dcefcb3 798 PRINTS PR00344 Bacterial sensor protein C-terminal signature 640 653 3.2E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS13580 2210595127df3b8dbbf636795dcefcb3 798 SUPERFAMILY SSF55785 300 412 3.14E-18 T 22-04-2016 IPR000014 PAS domain SMGD1_RS13580 2210595127df3b8dbbf636795dcefcb3 798 Gene3D G3DSA:3.40.50.2300 678 795 9.1E-41 T 22-04-2016 SMGD1_RS13580 2210595127df3b8dbbf636795dcefcb3 798 SMART SM00091 294 361 1.2E-4 T 22-04-2016 IPR000014 PAS domain SMGD1_RS13580 2210595127df3b8dbbf636795dcefcb3 798 SMART SM00448 676 789 9.7E-33 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS13580 2210595127df3b8dbbf636795dcefcb3 798 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 300 414 5.0E-17 T 22-04-2016 IPR000014 PAS domain SMGD1_RS13580 2210595127df3b8dbbf636795dcefcb3 798 Pfam PF00512 His Kinase A (phospho-acceptor) domain 430 495 1.0E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS13580 2210595127df3b8dbbf636795dcefcb3 798 SMART SM00388 430 495 2.6E-22 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS13580 2210595127df3b8dbbf636795dcefcb3 798 Gene3D G3DSA:3.30.450.20 298 435 1.4E-21 T 22-04-2016 SMGD1_RS13580 2210595127df3b8dbbf636795dcefcb3 798 SMART SM00387 542 656 3.5E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS13580 2210595127df3b8dbbf636795dcefcb3 798 PANTHER PTHR24423 107 155 3.8E-172 T 22-04-2016 SMGD1_RS13580 2210595127df3b8dbbf636795dcefcb3 798 PANTHER PTHR24423 292 792 3.8E-172 T 22-04-2016 SMGD1_RS13580 2210595127df3b8dbbf636795dcefcb3 798 Pfam PF00072 Response regulator receiver domain 679 789 1.9E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS13580 2210595127df3b8dbbf636795dcefcb3 798 SMART SM00086 368 410 0.0017 T 22-04-2016 IPR001610 PAC motif SMGD1_RS13580 2210595127df3b8dbbf636795dcefcb3 798 SUPERFAMILY SSF47384 414 495 1.18E-21 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS13580 2210595127df3b8dbbf636795dcefcb3 798 Gene3D G3DSA:3.30.565.10 501 654 3.4E-47 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS13580 2210595127df3b8dbbf636795dcefcb3 798 SUPERFAMILY SSF55874 484 654 7.73E-48 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS13580 2210595127df3b8dbbf636795dcefcb3 798 Pfam PF08448 PAS fold 303 412 1.8E-11 T 22-04-2016 IPR013656 PAS fold-4 SMGD1_RS13580 2210595127df3b8dbbf636795dcefcb3 798 Gene3D G3DSA:1.10.287.130 436 491 4.7E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS08145 f2b6c264d4e7c8c978f46c0960b6e963 363 PANTHER PTHR10264:SF78 135 300 2.3E-34 T 22-04-2016 SMGD1_RS08145 f2b6c264d4e7c8c978f46c0960b6e963 363 PANTHER PTHR10264:SF78 48 117 2.3E-34 T 22-04-2016 SMGD1_RS08145 f2b6c264d4e7c8c978f46c0960b6e963 363 PRINTS PR00679 Prohibitin signature 263 279 1.2E-10 T 22-04-2016 IPR000163 Prohibitin GO:0016020 SMGD1_RS08145 f2b6c264d4e7c8c978f46c0960b6e963 363 PRINTS PR00679 Prohibitin signature 240 263 1.2E-10 T 22-04-2016 IPR000163 Prohibitin GO:0016020 SMGD1_RS08145 f2b6c264d4e7c8c978f46c0960b6e963 363 PRINTS PR00679 Prohibitin signature 166 184 1.2E-10 T 22-04-2016 IPR000163 Prohibitin GO:0016020 SMGD1_RS08145 f2b6c264d4e7c8c978f46c0960b6e963 363 PRINTS PR00679 Prohibitin signature 189 205 1.2E-10 T 22-04-2016 IPR000163 Prohibitin GO:0016020 SMGD1_RS08145 f2b6c264d4e7c8c978f46c0960b6e963 363 SMART SM00244 63 245 3.6E-22 T 22-04-2016 IPR001107 Band 7 domain SMGD1_RS08145 f2b6c264d4e7c8c978f46c0960b6e963 363 SUPERFAMILY SSF117892 95 250 8.76E-12 T 22-04-2016 IPR001107 Band 7 domain SMGD1_RS08145 f2b6c264d4e7c8c978f46c0960b6e963 363 Pfam PF01145 SPFH domain / Band 7 family 67 265 5.8E-29 T 22-04-2016 IPR001107 Band 7 domain SMGD1_RS08145 f2b6c264d4e7c8c978f46c0960b6e963 363 PANTHER PTHR10264 135 300 2.3E-34 T 22-04-2016 IPR001972 Stomatin family GO:0016020 SMGD1_RS08145 f2b6c264d4e7c8c978f46c0960b6e963 363 PANTHER PTHR10264 48 117 2.3E-34 T 22-04-2016 IPR001972 Stomatin family GO:0016020 SMGD1_RS02340 6baa5191526f581d1c3681057ea57321 251 PANTHER PTHR10108 40 136 3.0E-15 T 22-04-2016 SMGD1_RS02340 6baa5191526f581d1c3681057ea57321 251 PANTHER PTHR10108:SF721 40 136 3.0E-15 T 22-04-2016 SMGD1_RS02340 6baa5191526f581d1c3681057ea57321 251 Pfam PF13847 Methyltransferase domain 39 154 2.3E-14 T 22-04-2016 IPR025714 Methyltransferase domain SMGD1_RS02340 6baa5191526f581d1c3681057ea57321 251 Gene3D G3DSA:3.40.50.150 38 248 2.0E-25 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS02340 6baa5191526f581d1c3681057ea57321 251 SUPERFAMILY SSF53335 7 183 1.94E-26 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS09165 7c0c06147b5a4c6a39e4042107e160db 337 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 252 328 6.0E-34 T 22-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 SMGD1_RS09165 7c0c06147b5a4c6a39e4042107e160db 337 SUPERFAMILY SSF46785 258 328 2.12E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMGD1_RS09165 7c0c06147b5a4c6a39e4042107e160db 337 Gene3D G3DSA:1.10.8.60 184 256 2.0E-25 T 22-04-2016 SMGD1_RS09165 7c0c06147b5a4c6a39e4042107e160db 337 SMART SM00382 52 185 4.5E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain SMGD1_RS09165 7c0c06147b5a4c6a39e4042107e160db 337 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 254 326 3.2E-24 T 22-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 SMGD1_RS09165 7c0c06147b5a4c6a39e4042107e160db 337 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 337 147.375 T 22-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 SMGD1_RS09165 7c0c06147b5a4c6a39e4042107e160db 337 Gene3D G3DSA:1.10.10.10 258 327 3.5E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMGD1_RS09165 7c0c06147b5a4c6a39e4042107e160db 337 PANTHER PTHR13779:SF25 11 329 4.1E-146 T 22-04-2016 SMGD1_RS09165 7c0c06147b5a4c6a39e4042107e160db 337 Gene3D G3DSA:3.40.50.300 22 179 5.9E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS09165 7c0c06147b5a4c6a39e4042107e160db 337 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 10 236 8.9E-111 T 22-04-2016 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 SMGD1_RS09165 7c0c06147b5a4c6a39e4042107e160db 337 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 26 326 1.7E-134 T 22-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 SMGD1_RS09165 7c0c06147b5a4c6a39e4042107e160db 337 PANTHER PTHR13779 11 329 4.1E-146 T 22-04-2016 SMGD1_RS09165 7c0c06147b5a4c6a39e4042107e160db 337 SUPERFAMILY SSF52540 21 250 2.95E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS09470 247e5290b41e78972100511ca42f8205 275 Pfam PF13145 PPIC-type PPIASE domain 118 245 5.3E-23 T 22-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 SMGD1_RS09470 247e5290b41e78972100511ca42f8205 275 PANTHER PTHR10657 15 275 8.7E-46 T 22-04-2016 SMGD1_RS09470 247e5290b41e78972100511ca42f8205 275 SUPERFAMILY SSF109998 22 162 7.85E-22 T 22-04-2016 IPR027304 Trigger factor/SurA domain SMGD1_RS09470 247e5290b41e78972100511ca42f8205 275 Pfam PF13624 SurA N-terminal domain 21 87 7.8E-7 T 22-04-2016 SMGD1_RS09470 247e5290b41e78972100511ca42f8205 275 PANTHER PTHR10657:SF11 15 275 8.7E-46 T 22-04-2016 SMGD1_RS09470 247e5290b41e78972100511ca42f8205 275 SUPERFAMILY SSF54534 130 232 9.03E-28 T 22-04-2016 SMGD1_RS09470 247e5290b41e78972100511ca42f8205 275 Gene3D G3DSA:3.10.50.40 130 257 5.0E-40 T 22-04-2016 SMGD1_RS00665 73bd0f382fb110792dd4bfe12cd2a7af 528 Gene3D G3DSA:3.30.70.260 449 525 1.7E-16 T 22-04-2016 SMGD1_RS00665 73bd0f382fb110792dd4bfe12cd2a7af 528 SUPERFAMILY SSF143548 323 451 9.94E-29 T 22-04-2016 IPR029009 Allosteric substrate binding domain SMGD1_RS00665 73bd0f382fb110792dd4bfe12cd2a7af 528 PANTHER PTHR10996 1 360 1.4E-127 T 22-04-2016 SMGD1_RS00665 73bd0f382fb110792dd4bfe12cd2a7af 528 SUPERFAMILY SSF51735 103 285 1.29E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS00665 73bd0f382fb110792dd4bfe12cd2a7af 528 SUPERFAMILY SSF55021 446 523 7.16E-13 T 22-04-2016 SMGD1_RS00665 73bd0f382fb110792dd4bfe12cd2a7af 528 Gene3D G3DSA:3.40.50.720 109 285 3.1E-58 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS00665 73bd0f382fb110792dd4bfe12cd2a7af 528 TIGRFAM TIGR01327 PGDH: phosphoglycerate dehydrogenase 6 527 5.5E-176 T 22-04-2016 IPR006236 D-3-phosphoglycerate dehydrogenase GO:0004617|GO:0006564 KEGG: 00260+1.1.1.95|KEGG: 00680+1.1.1.95|UniPathway: UPA00135 SMGD1_RS00665 73bd0f382fb110792dd4bfe12cd2a7af 528 Pfam PF01842 ACT domain 457 518 1.5E-7 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 SMGD1_RS00665 73bd0f382fb110792dd4bfe12cd2a7af 528 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 109 284 4.6E-54 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 SMGD1_RS00665 73bd0f382fb110792dd4bfe12cd2a7af 528 Gene3D G3DSA:3.40.50.720 2 108 3.2E-33 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS00665 73bd0f382fb110792dd4bfe12cd2a7af 528 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 6 316 3.7E-30 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 SMGD1_RS00665 73bd0f382fb110792dd4bfe12cd2a7af 528 PANTHER PTHR10996:SF20 1 360 1.4E-127 T 22-04-2016 SMGD1_RS00665 73bd0f382fb110792dd4bfe12cd2a7af 528 Gene3D G3DSA:3.30.1330.90 323 448 4.2E-36 T 22-04-2016 IPR029009 Allosteric substrate binding domain SMGD1_RS00665 73bd0f382fb110792dd4bfe12cd2a7af 528 SUPERFAMILY SSF52283 11 126 1.0E-32 T 22-04-2016 SMGD1_RS00665 73bd0f382fb110792dd4bfe12cd2a7af 528 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 147 174 - T 22-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 SMGD1_RS05970 9239e63288efbd0a5f5fa09165f96b7b 355 SUPERFAMILY SSF55073 191 322 8.63E-14 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS05970 9239e63288efbd0a5f5fa09165f96b7b 355 Pfam PF00990 Diguanylate cyclase, GGDEF domain 186 326 4.5E-12 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS05970 9239e63288efbd0a5f5fa09165f96b7b 355 Gene3D G3DSA:3.30.70.270 187 332 1.2E-15 T 22-04-2016 SMGD1_RS05970 9239e63288efbd0a5f5fa09165f96b7b 355 SMART SM00267 173 340 1.7E-5 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS05970 9239e63288efbd0a5f5fa09165f96b7b 355 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 181 334 1.1E-16 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS04200 999ddbfb62937c6b387362acd8ccb70f 323 Pfam PF00490 Delta-aminolevulinic acid dehydratase 3 319 1.0E-139 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SMGD1_RS04200 999ddbfb62937c6b387362acd8ccb70f 323 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 150 169 9.7E-58 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SMGD1_RS04200 999ddbfb62937c6b387362acd8ccb70f 323 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 118 132 9.7E-58 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SMGD1_RS04200 999ddbfb62937c6b387362acd8ccb70f 323 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 240 256 9.7E-58 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SMGD1_RS04200 999ddbfb62937c6b387362acd8ccb70f 323 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 295 314 9.7E-58 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SMGD1_RS04200 999ddbfb62937c6b387362acd8ccb70f 323 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 188 207 9.7E-58 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SMGD1_RS04200 999ddbfb62937c6b387362acd8ccb70f 323 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 265 280 9.7E-58 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SMGD1_RS04200 999ddbfb62937c6b387362acd8ccb70f 323 SMART SM01004 1 321 2.3E-215 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SMGD1_RS04200 999ddbfb62937c6b387362acd8ccb70f 323 PANTHER PTHR11458 2 321 1.9E-164 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SMGD1_RS04200 999ddbfb62937c6b387362acd8ccb70f 323 Gene3D G3DSA:3.20.20.70 2 321 2.9E-140 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMGD1_RS04200 999ddbfb62937c6b387362acd8ccb70f 323 SUPERFAMILY SSF51569 2 321 4.54E-133 T 22-04-2016 SMGD1_RS04200 999ddbfb62937c6b387362acd8ccb70f 323 PIRSF PIRSF001415 1 323 1.0E-141 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SMGD1_RS04200 999ddbfb62937c6b387362acd8ccb70f 323 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 240 252 - T 22-04-2016 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SMGD1_RS02020 b53006d74c5c0e9d558853b5ce8e08fb 307 PANTHER PTHR12544 1 307 3.5E-126 T 22-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 SMGD1_RS02020 b53006d74c5c0e9d558853b5ce8e08fb 307 SUPERFAMILY SSF56601 2 307 3.48E-105 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SMGD1_RS02020 b53006d74c5c0e9d558853b5ce8e08fb 307 TIGRFAM TIGR03814 Gln_ase: glutaminase A 7 307 1.5E-119 T 22-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 SMGD1_RS02020 b53006d74c5c0e9d558853b5ce8e08fb 307 Pfam PF04960 Glutaminase 21 307 1.3E-109 T 22-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 SMGD1_RS02020 b53006d74c5c0e9d558853b5ce8e08fb 307 Hamap MF_00313 Glutaminase [glsA]. 3 307 43.657 T 22-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 SMGD1_RS02020 b53006d74c5c0e9d558853b5ce8e08fb 307 Gene3D G3DSA:3.40.710.10 2 307 4.1E-116 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SMGD1_RS04615 24d4d285550d5d1338b7cb6fe8bf32c6 333 Gene3D G3DSA:2.30.42.10 233 325 6.7E-6 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SMGD1_RS04615 24d4d285550d5d1338b7cb6fe8bf32c6 333 Pfam PF13180 PDZ domain 163 239 1.9E-12 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SMGD1_RS04615 24d4d285550d5d1338b7cb6fe8bf32c6 333 Gene3D G3DSA:2.30.42.10 165 232 3.0E-8 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SMGD1_RS04615 24d4d285550d5d1338b7cb6fe8bf32c6 333 SUPERFAMILY SSF50156 148 239 2.51E-8 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SMGD1_RS06185 2a9aa3f5853d15c7e54c88dd39540d12 252 PANTHER PTHR21235 5 252 2.0E-125 T 22-04-2016 SMGD1_RS06185 2a9aa3f5853d15c7e54c88dd39540d12 252 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 4 251 9.4E-112 T 22-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 SMGD1_RS06185 2a9aa3f5853d15c7e54c88dd39540d12 252 Gene3D G3DSA:3.20.20.70 6 252 7.5E-106 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMGD1_RS06185 2a9aa3f5853d15c7e54c88dd39540d12 252 SUPERFAMILY SSF51366 5 251 7.38E-85 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 SMGD1_RS06185 2a9aa3f5853d15c7e54c88dd39540d12 252 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 3 251 48.136 T 22-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 SMGD1_RS06185 2a9aa3f5853d15c7e54c88dd39540d12 252 Pfam PF00977 Histidine biosynthesis protein 7 234 3.7E-90 T 22-04-2016 IPR006062 Histidine biosynthesis GO:0000105 SMGD1_RS06185 2a9aa3f5853d15c7e54c88dd39540d12 252 PANTHER PTHR21235:SF2 5 252 2.0E-125 T 22-04-2016 SMGD1_RS09865 2b15232d83ae609a1c19863dd5e39ffa 278 SUPERFAMILY SSF51735 34 272 3.86E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS09865 2b15232d83ae609a1c19863dd5e39ffa 278 PANTHER PTHR10366 63 226 2.9E-27 T 22-04-2016 SMGD1_RS09865 2b15232d83ae609a1c19863dd5e39ffa 278 Pfam PF01370 NAD dependent epimerase/dehydratase family 42 210 9.7E-28 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 SMGD1_RS09865 2b15232d83ae609a1c19863dd5e39ffa 278 Gene3D G3DSA:3.40.50.720 39 230 5.7E-28 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS12125 14818605d1a187b3f0d2ea66dfe3e786 411 Gene3D G3DSA:3.40.50.2300 18 128 1.3E-28 T 22-04-2016 SMGD1_RS12125 14818605d1a187b3f0d2ea66dfe3e786 411 Gene3D G3DSA:1.10.287.130 171 248 1.5E-5 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS12125 14818605d1a187b3f0d2ea66dfe3e786 411 SUPERFAMILY SSF55874 245 406 1.15E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS12125 14818605d1a187b3f0d2ea66dfe3e786 411 SUPERFAMILY SSF52172 18 168 4.55E-27 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS12125 14818605d1a187b3f0d2ea66dfe3e786 411 SMART SM00448 18 129 1.8E-21 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS12125 14818605d1a187b3f0d2ea66dfe3e786 411 SUPERFAMILY SSF47384 170 254 2.35E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS12125 14818605d1a187b3f0d2ea66dfe3e786 411 Gene3D G3DSA:3.30.565.10 255 405 1.2E-30 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS12125 14818605d1a187b3f0d2ea66dfe3e786 411 PRINTS PR00344 Bacterial sensor protein C-terminal signature 353 363 3.7E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS12125 14818605d1a187b3f0d2ea66dfe3e786 411 PRINTS PR00344 Bacterial sensor protein C-terminal signature 335 349 3.7E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS12125 14818605d1a187b3f0d2ea66dfe3e786 411 PRINTS PR00344 Bacterial sensor protein C-terminal signature 392 405 3.7E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS12125 14818605d1a187b3f0d2ea66dfe3e786 411 PRINTS PR00344 Bacterial sensor protein C-terminal signature 366 384 3.7E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS12125 14818605d1a187b3f0d2ea66dfe3e786 411 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 296 407 2.4E-16 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS12125 14818605d1a187b3f0d2ea66dfe3e786 411 SMART SM00387 294 408 2.9E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS12125 14818605d1a187b3f0d2ea66dfe3e786 411 PANTHER PTHR24423 159 406 1.2E-28 T 22-04-2016 SMGD1_RS12125 14818605d1a187b3f0d2ea66dfe3e786 411 Pfam PF00072 Response regulator receiver domain 20 126 1.5E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS08380 c84df91ab4c7d56cdf99ded4a291d724 405 Gene3D G3DSA:2.40.160.60 18 405 7.7E-88 T 22-04-2016 SMGD1_RS08380 c84df91ab4c7d56cdf99ded4a291d724 405 PANTHER PTHR35093 1 405 8.7E-65 T 22-04-2016 SMGD1_RS08380 c84df91ab4c7d56cdf99ded4a291d724 405 PANTHER PTHR35093:SF2 1 405 8.7E-65 T 22-04-2016 SMGD1_RS08380 c84df91ab4c7d56cdf99ded4a291d724 405 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 10 405 1.5E-49 T 22-04-2016 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) SMGD1_RS08380 c84df91ab4c7d56cdf99ded4a291d724 405 SUPERFAMILY SSF56935 18 405 2.44E-62 T 22-04-2016 SMGD1_RS01865 7fe028f6346b0a9087ea430bb91c51c0 276 SMART SM00138 7 274 9.8E-56 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SMGD1_RS01865 7fe028f6346b0a9087ea430bb91c51c0 276 PANTHER PTHR24422 5 276 1.0E-58 T 22-04-2016 SMGD1_RS01865 7fe028f6346b0a9087ea430bb91c51c0 276 Gene3D G3DSA:1.10.155.10 5 75 2.4E-11 T 22-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal SMGD1_RS01865 7fe028f6346b0a9087ea430bb91c51c0 276 SUPERFAMILY SSF53335 77 263 7.1E-43 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS01865 7fe028f6346b0a9087ea430bb91c51c0 276 PRINTS PR00996 Glutamate methyltransferase family signature 110 130 7.6E-29 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SMGD1_RS01865 7fe028f6346b0a9087ea430bb91c51c0 276 PRINTS PR00996 Glutamate methyltransferase family signature 214 228 7.6E-29 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SMGD1_RS01865 7fe028f6346b0a9087ea430bb91c51c0 276 PRINTS PR00996 Glutamate methyltransferase family signature 145 161 7.6E-29 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SMGD1_RS01865 7fe028f6346b0a9087ea430bb91c51c0 276 PRINTS PR00996 Glutamate methyltransferase family signature 70 82 7.6E-29 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SMGD1_RS01865 7fe028f6346b0a9087ea430bb91c51c0 276 PRINTS PR00996 Glutamate methyltransferase family signature 233 256 7.6E-29 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SMGD1_RS01865 7fe028f6346b0a9087ea430bb91c51c0 276 SUPERFAMILY SSF47757 4 76 2.35E-7 T 22-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal SMGD1_RS01865 7fe028f6346b0a9087ea430bb91c51c0 276 Gene3D G3DSA:3.40.50.150 76 264 3.3E-55 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS01865 7fe028f6346b0a9087ea430bb91c51c0 276 PANTHER PTHR24422:SF14 5 276 1.0E-58 T 22-04-2016 SMGD1_RS01865 7fe028f6346b0a9087ea430bb91c51c0 276 Pfam PF01739 CheR methyltransferase, SAM binding domain 77 268 1.3E-50 T 22-04-2016 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal SMGD1_RS03720 41c40f62767551742e23eab68d8e3e01 185 PANTHER PTHR17224:SF1 2 177 1.1E-64 T 22-04-2016 SMGD1_RS03720 41c40f62767551742e23eab68d8e3e01 185 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 13 26 - T 22-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 SMGD1_RS03720 41c40f62767551742e23eab68d8e3e01 185 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 101 111 - T 22-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 SMGD1_RS03720 41c40f62767551742e23eab68d8e3e01 185 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 1 171 31.391 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 SMGD1_RS03720 41c40f62767551742e23eab68d8e3e01 185 Pfam PF01195 Peptidyl-tRNA hydrolase 2 176 3.0E-55 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 SMGD1_RS03720 41c40f62767551742e23eab68d8e3e01 185 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 2 177 5.0E-54 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 SMGD1_RS03720 41c40f62767551742e23eab68d8e3e01 185 Gene3D G3DSA:3.40.50.1470 1 177 9.7E-62 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 SMGD1_RS03720 41c40f62767551742e23eab68d8e3e01 185 SUPERFAMILY SSF53178 1 177 7.46E-60 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 SMGD1_RS03720 41c40f62767551742e23eab68d8e3e01 185 PANTHER PTHR17224 2 177 1.1E-64 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 SMGD1_RS13555 60fa4889b9cd47ef0c22fe8c37a71427 258 Pfam PF01026 TatD related DNase 3 255 1.7E-73 T 22-04-2016 IPR001130 TatD family GO:0016788 SMGD1_RS13555 60fa4889b9cd47ef0c22fe8c37a71427 258 PIRSF PIRSF005902 1 258 1.1E-77 T 22-04-2016 IPR001130 TatD family GO:0016788 SMGD1_RS13555 60fa4889b9cd47ef0c22fe8c37a71427 258 PANTHER PTHR10060 1 258 3.3E-95 T 22-04-2016 IPR001130 TatD family GO:0016788 SMGD1_RS13555 60fa4889b9cd47ef0c22fe8c37a71427 258 Gene3D G3DSA:3.20.20.140 1 257 1.0E-85 T 22-04-2016 SMGD1_RS13555 60fa4889b9cd47ef0c22fe8c37a71427 258 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 256 9.4E-81 T 22-04-2016 IPR015991 Uncharacterised deoxyribonuclease TatD-type GO:0004536 SMGD1_RS13555 60fa4889b9cd47ef0c22fe8c37a71427 258 PANTHER PTHR10060:SF20 1 258 3.3E-95 T 22-04-2016 SMGD1_RS13555 60fa4889b9cd47ef0c22fe8c37a71427 258 SUPERFAMILY SSF51556 1 257 1.68E-79 T 22-04-2016 IPR032466 Metal-dependent hydrolase SMGD1_RS13555 60fa4889b9cd47ef0c22fe8c37a71427 258 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 192 208 - T 22-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 SMGD1_RS13555 60fa4889b9cd47ef0c22fe8c37a71427 258 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 22-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 SMGD1_RS11615 138a6266d78b6ce8043bcd3a98b903a8 235 SMART SM00363 1 65 4.0E-10 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SMGD1_RS11615 138a6266d78b6ce8043bcd3a98b903a8 235 Pfam PF01479 S4 domain 1 48 1.7E-11 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SMGD1_RS11615 138a6266d78b6ce8043bcd3a98b903a8 235 TIGRFAM TIGR00478 tly: TlyA family rRNA methyltransferase/putative hemolysin 2 228 8.1E-62 T 22-04-2016 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 SMGD1_RS11615 138a6266d78b6ce8043bcd3a98b903a8 235 PANTHER PTHR32319 1 229 1.6E-66 T 22-04-2016 SMGD1_RS11615 138a6266d78b6ce8043bcd3a98b903a8 235 PANTHER PTHR32319:SF0 1 229 1.6E-66 T 22-04-2016 SMGD1_RS11615 138a6266d78b6ce8043bcd3a98b903a8 235 SUPERFAMILY SSF53335 53 179 6.64E-19 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS11615 138a6266d78b6ce8043bcd3a98b903a8 235 SUPERFAMILY SSF55174 1 65 3.97E-13 T 22-04-2016 SMGD1_RS11615 138a6266d78b6ce8043bcd3a98b903a8 235 Pfam PF01728 FtsJ-like methyltransferase 56 189 1.7E-16 T 22-04-2016 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 SMGD1_RS11615 138a6266d78b6ce8043bcd3a98b903a8 235 Gene3D G3DSA:3.10.290.10 1 82 6.3E-23 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SMGD1_RS11615 138a6266d78b6ce8043bcd3a98b903a8 235 Gene3D G3DSA:3.40.50.150 83 148 8.1E-6 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS06815 e49861767bc2c1cef5c112f01c28eeac 293 Gene3D G3DSA:3.40.190.10 85 173 1.5E-5 T 22-04-2016 SMGD1_RS06815 e49861767bc2c1cef5c112f01c28eeac 293 Pfam PF02621 Menaquinone biosynthesis 12 267 3.2E-75 T 22-04-2016 IPR003773 Menaquinone biosynthesis enzyme UniPathway: UPA00079 SMGD1_RS06815 e49861767bc2c1cef5c112f01c28eeac 293 PANTHER PTHR37167 8 285 3.1E-49 T 22-04-2016 SMGD1_RS06815 e49861767bc2c1cef5c112f01c28eeac 293 Hamap MF_00996 1,4-dihydroxy-6-naphtoate synthase [mqnD]. 9 273 35.179 T 22-04-2016 IPR030869 1,4-dihydroxy-6-naphtoate synthase GO:0009234|GO:0016829 UniPathway: UPA00079 SMGD1_RS06815 e49861767bc2c1cef5c112f01c28eeac 293 SUPERFAMILY SSF53850 12 271 4.73E-75 T 22-04-2016 SMGD1_RS04705 fbef18ce639d59f296880a6bace22015 417 Gene3D G3DSA:3.30.70.270 259 415 3.6E-47 T 22-04-2016 SMGD1_RS04705 fbef18ce639d59f296880a6bace22015 417 SMART SM00448 125 240 2.8E-30 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS04705 fbef18ce639d59f296880a6bace22015 417 SMART SM00448 2 113 1.5E-6 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS04705 fbef18ce639d59f296880a6bace22015 417 Pfam PF00990 Diguanylate cyclase, GGDEF domain 257 412 2.0E-41 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS04705 fbef18ce639d59f296880a6bace22015 417 SUPERFAMILY SSF55073 262 415 3.84E-44 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS04705 fbef18ce639d59f296880a6bace22015 417 Gene3D G3DSA:3.40.50.2300 2 118 2.2E-14 T 22-04-2016 SMGD1_RS04705 fbef18ce639d59f296880a6bace22015 417 PANTHER PTHR26402 125 241 9.8E-34 T 22-04-2016 SMGD1_RS04705 fbef18ce639d59f296880a6bace22015 417 SUPERFAMILY SSF52172 1 116 2.28E-15 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS04705 fbef18ce639d59f296880a6bace22015 417 Gene3D G3DSA:3.40.50.2300 125 245 1.6E-33 T 22-04-2016 SMGD1_RS04705 fbef18ce639d59f296880a6bace22015 417 SUPERFAMILY SSF52172 125 256 3.7E-31 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS04705 fbef18ce639d59f296880a6bace22015 417 Pfam PF00072 Response regulator receiver domain 4 110 8.5E-9 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS04705 fbef18ce639d59f296880a6bace22015 417 Pfam PF00072 Response regulator receiver domain 127 241 2.5E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS04705 fbef18ce639d59f296880a6bace22015 417 SMART SM00267 246 416 8.2E-51 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS04705 fbef18ce639d59f296880a6bace22015 417 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 255 416 1.2E-45 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS02670 0073654c912332d6b29091714c650aea 836 Pfam PF08335 GlnD PII-uridylyltransferase 189 317 6.3E-26 T 22-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 SMGD1_RS02670 0073654c912332d6b29091714c650aea 836 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 836 80.15 T 22-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 SMGD1_RS02670 0073654c912332d6b29091714c650aea 836 Pfam PF03445 Putative nucleotidyltransferase DUF294 51 110 8.2E-5 T 22-04-2016 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 SMGD1_RS02670 0073654c912332d6b29091714c650aea 836 Gene3D G3DSA:3.30.460.10 83 160 2.8E-5 T 22-04-2016 SMGD1_RS02670 0073654c912332d6b29091714c650aea 836 PIRSF PIRSF006288 12 833 3.2E-135 T 22-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 SMGD1_RS02670 0073654c912332d6b29091714c650aea 836 Pfam PF01966 HD domain 470 542 7.9E-7 T 22-04-2016 IPR006674 HD domain SMGD1_RS02670 0073654c912332d6b29091714c650aea 836 Gene3D G3DSA:1.10.3210.10 436 600 2.2E-15 T 22-04-2016 IPR006674 HD domain SMGD1_RS02670 0073654c912332d6b29091714c650aea 836 PANTHER PTHR13734 406 598 3.9E-44 T 22-04-2016 SMGD1_RS02670 0073654c912332d6b29091714c650aea 836 PANTHER PTHR13734:SF45 406 598 3.9E-44 T 22-04-2016 SMGD1_RS02670 0073654c912332d6b29091714c650aea 836 Gene3D G3DSA:3.30.70.260 769 832 1.1E-4 T 22-04-2016 SMGD1_RS02670 0073654c912332d6b29091714c650aea 836 SUPERFAMILY SSF81593 197 311 9.42E-8 T 22-04-2016 SMGD1_RS02670 0073654c912332d6b29091714c650aea 836 SUPERFAMILY SSF55021 769 832 2.61E-5 T 22-04-2016 SMGD1_RS02670 0073654c912332d6b29091714c650aea 836 SUPERFAMILY SSF81301 56 176 8.72E-14 T 22-04-2016 SMGD1_RS02670 0073654c912332d6b29091714c650aea 836 SUPERFAMILY SSF109604 440 592 2.35E-12 T 22-04-2016 SMGD1_RS05655 bd0bbb747064fe78fd4987183283eb6c 740 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 489 597 1.8E-27 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS05655 bd0bbb747064fe78fd4987183283eb6c 740 SUPERFAMILY SSF55874 428 596 3.93E-46 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS05655 bd0bbb747064fe78fd4987183283eb6c 740 Pfam PF11845 Protein of unknown function (DUF3365) 26 203 9.5E-18 T 22-04-2016 IPR021796 Protein of unknown function DUF3365 SMGD1_RS05655 bd0bbb747064fe78fd4987183283eb6c 740 SUPERFAMILY SSF55785 272 369 1.74E-27 T 22-04-2016 IPR000014 PAS domain SMGD1_RS05655 bd0bbb747064fe78fd4987183283eb6c 740 Gene3D G3DSA:3.30.450.20 269 371 2.0E-25 T 22-04-2016 SMGD1_RS05655 bd0bbb747064fe78fd4987183283eb6c 740 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 274 377 2.5E-18 T 22-04-2016 IPR000014 PAS domain SMGD1_RS05655 bd0bbb747064fe78fd4987183283eb6c 740 SMART SM00388 374 439 5.9E-20 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS05655 bd0bbb747064fe78fd4987183283eb6c 740 Pfam PF08447 PAS fold 281 364 4.2E-17 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 SMGD1_RS05655 bd0bbb747064fe78fd4987183283eb6c 740 SMART SM00091 256 324 5.2E-4 T 22-04-2016 IPR000014 PAS domain SMGD1_RS05655 bd0bbb747064fe78fd4987183283eb6c 740 SUPERFAMILY SSF52172 622 738 1.15E-32 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS05655 bd0bbb747064fe78fd4987183283eb6c 740 Pfam PF00512 His Kinase A (phospho-acceptor) domain 374 439 5.1E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS05655 bd0bbb747064fe78fd4987183283eb6c 740 Gene3D G3DSA:1.10.287.130 372 435 1.6E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS05655 bd0bbb747064fe78fd4987183283eb6c 740 Pfam PF00072 Response regulator receiver domain 623 734 4.3E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS05655 bd0bbb747064fe78fd4987183283eb6c 740 PRINTS PR00344 Bacterial sensor protein C-terminal signature 523 537 2.0E-18 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS05655 bd0bbb747064fe78fd4987183283eb6c 740 PRINTS PR00344 Bacterial sensor protein C-terminal signature 558 576 2.0E-18 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS05655 bd0bbb747064fe78fd4987183283eb6c 740 PRINTS PR00344 Bacterial sensor protein C-terminal signature 541 551 2.0E-18 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS05655 bd0bbb747064fe78fd4987183283eb6c 740 PRINTS PR00344 Bacterial sensor protein C-terminal signature 582 595 2.0E-18 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS05655 bd0bbb747064fe78fd4987183283eb6c 740 SUPERFAMILY SSF47384 370 440 6.67E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS05655 bd0bbb747064fe78fd4987183283eb6c 740 SMART SM00086 330 372 5.0E-6 T 22-04-2016 IPR001610 PAC motif SMGD1_RS05655 bd0bbb747064fe78fd4987183283eb6c 740 PANTHER PTHR24423 239 740 5.1E-144 T 22-04-2016 SMGD1_RS05655 bd0bbb747064fe78fd4987183283eb6c 740 PANTHER PTHR24423 188 222 5.1E-144 T 22-04-2016 SMGD1_RS05655 bd0bbb747064fe78fd4987183283eb6c 740 Gene3D G3DSA:3.40.50.2300 622 739 1.2E-35 T 22-04-2016 SMGD1_RS05655 bd0bbb747064fe78fd4987183283eb6c 740 SMART SM00387 486 598 2.5E-41 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS05655 bd0bbb747064fe78fd4987183283eb6c 740 Gene3D G3DSA:3.30.565.10 447 596 9.1E-47 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS05655 bd0bbb747064fe78fd4987183283eb6c 740 SMART SM00448 621 734 1.1E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS13045 407041523db689a870a3cea6d979651a 1040 Gene3D G3DSA:3.40.50.2300 821 942 2.9E-33 T 22-04-2016 SMGD1_RS13045 407041523db689a870a3cea6d979651a 1040 Gene3D G3DSA:3.40.190.10 115 211 4.1E-16 T 22-04-2016 SMGD1_RS13045 407041523db689a870a3cea6d979651a 1040 PRINTS PR00344 Bacterial sensor protein C-terminal signature 778 791 6.0E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS13045 407041523db689a870a3cea6d979651a 1040 PRINTS PR00344 Bacterial sensor protein C-terminal signature 719 733 6.0E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS13045 407041523db689a870a3cea6d979651a 1040 PRINTS PR00344 Bacterial sensor protein C-terminal signature 737 747 6.0E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS13045 407041523db689a870a3cea6d979651a 1040 PRINTS PR00344 Bacterial sensor protein C-terminal signature 754 772 6.0E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS13045 407041523db689a870a3cea6d979651a 1040 SUPERFAMILY SSF47384 551 630 2.55E-20 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS13045 407041523db689a870a3cea6d979651a 1040 SUPERFAMILY SSF53850 31 255 1.36E-44 T 22-04-2016 SMGD1_RS13045 407041523db689a870a3cea6d979651a 1040 PANTHER PTHR24423:SF486 460 499 1.1E-125 T 22-04-2016 SMGD1_RS13045 407041523db689a870a3cea6d979651a 1040 PANTHER PTHR24423:SF486 543 976 1.1E-125 T 22-04-2016 SMGD1_RS13045 407041523db689a870a3cea6d979651a 1040 PANTHER PTHR24423:SF486 103 164 1.1E-125 T 22-04-2016 SMGD1_RS13045 407041523db689a870a3cea6d979651a 1040 PANTHER PTHR24423 460 499 1.1E-125 T 22-04-2016 SMGD1_RS13045 407041523db689a870a3cea6d979651a 1040 PANTHER PTHR24423 103 164 1.1E-125 T 22-04-2016 SMGD1_RS13045 407041523db689a870a3cea6d979651a 1040 Pfam PF00512 His Kinase A (phospho-acceptor) domain 564 629 9.1E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS13045 407041523db689a870a3cea6d979651a 1040 SMART SM00062 281 499 2.2E-11 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SMGD1_RS13045 407041523db689a870a3cea6d979651a 1040 SMART SM00062 38 253 8.1E-31 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SMGD1_RS13045 407041523db689a870a3cea6d979651a 1040 SUPERFAMILY SSF55874 618 791 8.64E-41 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS13045 407041523db689a870a3cea6d979651a 1040 Pfam PF00072 Response regulator receiver domain 821 929 2.0E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS13045 407041523db689a870a3cea6d979651a 1040 Gene3D G3DSA:3.40.190.10 459 500 2.3E-16 T 22-04-2016 SMGD1_RS13045 407041523db689a870a3cea6d979651a 1040 Gene3D G3DSA:3.40.190.10 35 114 2.6E-26 T 22-04-2016 SMGD1_RS13045 407041523db689a870a3cea6d979651a 1040 Gene3D G3DSA:3.40.190.10 218 254 2.6E-26 T 22-04-2016 SMGD1_RS13045 407041523db689a870a3cea6d979651a 1040 Gene3D G3DSA:3.40.190.10 281 365 2.3E-16 T 22-04-2016 SMGD1_RS13045 407041523db689a870a3cea6d979651a 1040 Gene3D G3DSA:1.10.287.130 561 614 3.9E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS13045 407041523db689a870a3cea6d979651a 1040 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 288 497 5.3E-25 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SMGD1_RS13045 407041523db689a870a3cea6d979651a 1040 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 39 254 1.5E-39 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SMGD1_RS13045 407041523db689a870a3cea6d979651a 1040 Gene3D G3DSA:3.40.190.10 366 456 3.5E-8 T 22-04-2016 SMGD1_RS13045 407041523db689a870a3cea6d979651a 1040 SMART SM00387 676 794 4.1E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS13045 407041523db689a870a3cea6d979651a 1040 SMART SM00448 819 929 6.1E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS13045 407041523db689a870a3cea6d979651a 1040 PANTHER PTHR24423 543 976 1.1E-125 T 22-04-2016 SMGD1_RS13045 407041523db689a870a3cea6d979651a 1040 SUPERFAMILY SSF52172 820 955 1.25E-31 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS13045 407041523db689a870a3cea6d979651a 1040 SUPERFAMILY SSF53850 275 500 1.63E-31 T 22-04-2016 SMGD1_RS13045 407041523db689a870a3cea6d979651a 1040 Gene3D G3DSA:3.30.565.10 615 791 4.4E-41 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS13045 407041523db689a870a3cea6d979651a 1040 SMART SM00388 564 629 2.1E-21 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS13045 407041523db689a870a3cea6d979651a 1040 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 677 791 1.9E-24 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS11450 31d0bde6640aa9c9dac9f94dabce2435 312 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 300 5.3E-17 T 22-04-2016 IPR020801 Polyketide synthase, acyl transferase domain SMGD1_RS11450 31d0bde6640aa9c9dac9f94dabce2435 312 Gene3D G3DSA:3.30.70.250 129 198 5.8E-23 T 22-04-2016 SMGD1_RS11450 31d0bde6640aa9c9dac9f94dabce2435 312 SUPERFAMILY SSF55048 130 194 3.27E-14 T 22-04-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 SMGD1_RS11450 31d0bde6640aa9c9dac9f94dabce2435 312 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 291 1.7E-91 T 22-04-2016 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 SMGD1_RS11450 31d0bde6640aa9c9dac9f94dabce2435 312 Gene3D G3DSA:3.40.366.10 199 298 7.4E-56 T 22-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 SMGD1_RS11450 31d0bde6640aa9c9dac9f94dabce2435 312 Gene3D G3DSA:3.40.366.10 2 123 7.4E-56 T 22-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 SMGD1_RS11450 31d0bde6640aa9c9dac9f94dabce2435 312 Pfam PF00698 Acyl transferase domain 7 266 1.3E-29 T 22-04-2016 IPR014043 Acyl transferase SMGD1_RS11450 31d0bde6640aa9c9dac9f94dabce2435 312 PIRSF PIRSF000446 1 311 1.5E-78 T 22-04-2016 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388|UniPathway: UPA00094 SMGD1_RS11450 31d0bde6640aa9c9dac9f94dabce2435 312 SUPERFAMILY SSF52151 191 308 2.56E-54 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 SMGD1_RS11450 31d0bde6640aa9c9dac9f94dabce2435 312 SUPERFAMILY SSF52151 4 122 2.56E-54 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 SMGD1_RS11450 31d0bde6640aa9c9dac9f94dabce2435 312 PANTHER PTHR10982 1 310 1.1E-93 T 22-04-2016 SMGD1_RS13215 5365927c8cf0b1b088f8bd6eae0e9e71 174 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 4 173 1.3E-51 T 22-04-2016 IPR004507 Flavin prenyltransferase UbiX/Pad1 SMGD1_RS13215 5365927c8cf0b1b088f8bd6eae0e9e71 174 SUPERFAMILY SSF52507 3 174 3.27E-55 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 SMGD1_RS13215 5365927c8cf0b1b088f8bd6eae0e9e71 174 PANTHER PTHR30108:SF2 2 174 4.3E-62 T 22-04-2016 SMGD1_RS13215 5365927c8cf0b1b088f8bd6eae0e9e71 174 Gene3D G3DSA:3.40.50.1950 3 174 3.5E-72 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 SMGD1_RS13215 5365927c8cf0b1b088f8bd6eae0e9e71 174 Pfam PF02441 Flavoprotein 3 116 1.0E-28 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 SMGD1_RS13215 5365927c8cf0b1b088f8bd6eae0e9e71 174 PANTHER PTHR30108 2 174 4.3E-62 T 22-04-2016 SMGD1_RS13215 5365927c8cf0b1b088f8bd6eae0e9e71 174 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 3 174 30.274 T 22-04-2016 IPR004507 Flavin prenyltransferase UbiX/Pad1 SMGD1_RS09440 ac0db576d83e6d9641cc682aff31a3b8 359 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 172 183 - T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 SMGD1_RS09440 ac0db576d83e6d9641cc682aff31a3b8 359 PIRSF PIRSF001359 14 359 3.1E-94 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 SMGD1_RS09440 ac0db576d83e6d9641cc682aff31a3b8 359 PANTHER PTHR30559 4 359 2.3E-228 T 22-04-2016 SMGD1_RS09440 ac0db576d83e6d9641cc682aff31a3b8 359 Gene3D G3DSA:3.20.20.70 12 358 1.8E-121 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMGD1_RS09440 ac0db576d83e6d9641cc682aff31a3b8 359 Pfam PF01116 Fructose-bisphosphate aldolase class-II 18 357 1.2E-89 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 SMGD1_RS09440 ac0db576d83e6d9641cc682aff31a3b8 359 TIGRFAM TIGR01520 FruBisAldo_II_A: fructose-bisphosphate aldolase, class II 5 358 2.1E-171 T 22-04-2016 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|UniPathway: UPA00109 SMGD1_RS09440 ac0db576d83e6d9641cc682aff31a3b8 359 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 101 112 - T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 SMGD1_RS09440 ac0db576d83e6d9641cc682aff31a3b8 359 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 16 358 4.1E-108 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 SMGD1_RS09440 ac0db576d83e6d9641cc682aff31a3b8 359 SUPERFAMILY SSF51569 5 358 8.64E-129 T 22-04-2016 SMGD1_RS09440 ac0db576d83e6d9641cc682aff31a3b8 359 PANTHER PTHR30559:SF0 4 359 2.3E-228 T 22-04-2016 SMGD1_RS04180 b6d757cbad830fc5ee4b3e257d6f53d7 321 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 18 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMGD1_RS04180 b6d757cbad830fc5ee4b3e257d6f53d7 321 PANTHER PTHR10055:SF10 2 321 2.0E-110 T 22-04-2016 SMGD1_RS04180 b6d757cbad830fc5ee4b3e257d6f53d7 321 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 63 82 3.0E-24 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 SMGD1_RS04180 b6d757cbad830fc5ee4b3e257d6f53d7 321 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 138 159 3.0E-24 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 SMGD1_RS04180 b6d757cbad830fc5ee4b3e257d6f53d7 321 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 189 199 3.0E-24 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 SMGD1_RS04180 b6d757cbad830fc5ee4b3e257d6f53d7 321 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 13 29 3.0E-24 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 SMGD1_RS04180 b6d757cbad830fc5ee4b3e257d6f53d7 321 Gene3D G3DSA:3.40.50.620 2 198 1.1E-75 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMGD1_RS04180 b6d757cbad830fc5ee4b3e257d6f53d7 321 PANTHER PTHR10055 2 321 2.0E-110 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 SMGD1_RS04180 b6d757cbad830fc5ee4b3e257d6f53d7 321 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 2 318 7.5E-81 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 SMGD1_RS04180 b6d757cbad830fc5ee4b3e257d6f53d7 321 SUPERFAMILY SSF52374 2 319 5.64E-79 T 22-04-2016 SMGD1_RS04180 b6d757cbad830fc5ee4b3e257d6f53d7 321 Pfam PF00579 tRNA synthetases class I (W and Y) 1 227 3.0E-55 T 22-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMGD1_RS04180 b6d757cbad830fc5ee4b3e257d6f53d7 321 Gene3D G3DSA:1.10.240.10 199 286 2.7E-23 T 22-04-2016 SMGD1_RS07940 5b80fbf8460c527163e21a9fd14574f0 121 SMART SM00938 14 105 0.0016 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SMGD1_RS07940 5b80fbf8460c527163e21a9fd14574f0 121 Pfam PF00543 Nitrogen regulatory protein P-II 14 104 4.7E-7 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SMGD1_RS07940 5b80fbf8460c527163e21a9fd14574f0 121 SUPERFAMILY SSF54913 12 105 7.94E-17 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta SMGD1_RS07940 5b80fbf8460c527163e21a9fd14574f0 121 Gene3D G3DSA:3.30.70.120 13 104 3.3E-9 T 22-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal SMGD1_RS10875 ba37f970861977565b9f19f740c2b832 349 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 6 349 1.4E-122 T 22-04-2016 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 SMGD1_RS10875 ba37f970861977565b9f19f740c2b832 349 SUPERFAMILY SSF160544 241 347 2.88E-40 T 22-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal SMGD1_RS10875 ba37f970861977565b9f19f740c2b832 349 Gene3D G3DSA:3.40.1690.10 216 348 1.6E-59 T 22-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal SMGD1_RS10875 ba37f970861977565b9f19f740c2b832 349 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 225 242 1.4E-39 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 SMGD1_RS10875 ba37f970861977565b9f19f740c2b832 349 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 205 223 1.4E-39 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 SMGD1_RS10875 ba37f970861977565b9f19f740c2b832 349 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 298 319 1.4E-39 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 SMGD1_RS10875 ba37f970861977565b9f19f740c2b832 349 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 8 30 1.4E-39 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 SMGD1_RS10875 ba37f970861977565b9f19f740c2b832 349 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 269 284 1.4E-39 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 SMGD1_RS10875 ba37f970861977565b9f19f740c2b832 349 Pfam PF01312 FlhB HrpN YscU SpaS Family 6 343 1.0E-118 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 SMGD1_RS10875 ba37f970861977565b9f19f740c2b832 349 PANTHER PTHR30531 1 349 9.9E-113 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 SMGD1_RS10875 ba37f970861977565b9f19f740c2b832 349 PANTHER PTHR30531:SF0 1 349 9.9E-113 T 22-04-2016 SMGD1_RS07055 c5d7875850dd8801caea2cd664dc4f8b 373 Pfam PF04055 Radical SAM superfamily 28 181 3.4E-21 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SMGD1_RS07055 c5d7875850dd8801caea2cd664dc4f8b 373 PIRSF PIRSF037420 10 373 9.3E-106 T 22-04-2016 IPR017200 Coenzyme PQQ synthesis protein E UniPathway: UPA00539 SMGD1_RS07055 c5d7875850dd8801caea2cd664dc4f8b 373 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 276 363 5.3E-8 T 22-04-2016 IPR023885 4Fe4S-binding SPASM domain SMGD1_RS07055 c5d7875850dd8801caea2cd664dc4f8b 373 Gene3D G3DSA:3.20.20.70 24 354 3.0E-66 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMGD1_RS07055 c5d7875850dd8801caea2cd664dc4f8b 373 SUPERFAMILY SSF102114 23 344 7.06E-65 T 22-04-2016 SMGD1_RS07055 c5d7875850dd8801caea2cd664dc4f8b 373 Pfam PF13353 4Fe-4S single cluster domain 26 131 5.4E-11 T 22-04-2016 SMGD1_RS07055 c5d7875850dd8801caea2cd664dc4f8b 373 PANTHER PTHR11228:SF32 27 212 3.1E-77 T 22-04-2016 SMGD1_RS07055 c5d7875850dd8801caea2cd664dc4f8b 373 PANTHER PTHR11228:SF32 233 373 3.1E-77 T 22-04-2016 SMGD1_RS07055 c5d7875850dd8801caea2cd664dc4f8b 373 SMART SM00729 23 220 0.0013 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 SMGD1_RS07055 c5d7875850dd8801caea2cd664dc4f8b 373 PANTHER PTHR11228 27 212 3.1E-77 T 22-04-2016 SMGD1_RS07055 c5d7875850dd8801caea2cd664dc4f8b 373 PANTHER PTHR11228 233 373 3.1E-77 T 22-04-2016 SMGD1_RS01045 bb2b0b8f2adc4a117811a8c0bf49fb44 1130 SMART SM00028 749 782 4.2 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMGD1_RS01045 bb2b0b8f2adc4a117811a8c0bf49fb44 1130 SMART SM00028 842 875 110.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMGD1_RS01045 bb2b0b8f2adc4a117811a8c0bf49fb44 1130 SMART SM00028 1026 1059 53.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMGD1_RS01045 bb2b0b8f2adc4a117811a8c0bf49fb44 1130 SMART SM00028 980 1013 330.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMGD1_RS01045 bb2b0b8f2adc4a117811a8c0bf49fb44 1130 SMART SM00028 934 967 9.9 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMGD1_RS01045 bb2b0b8f2adc4a117811a8c0bf49fb44 1130 SMART SM00028 888 921 240.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMGD1_RS01045 bb2b0b8f2adc4a117811a8c0bf49fb44 1130 SMART SM00028 796 829 41.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMGD1_RS01045 bb2b0b8f2adc4a117811a8c0bf49fb44 1130 Gene3D G3DSA:1.25.40.10 858 991 1.7E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS01045 bb2b0b8f2adc4a117811a8c0bf49fb44 1130 Pfam PF13401 AAA domain 256 364 3.3E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain SMGD1_RS01045 bb2b0b8f2adc4a117811a8c0bf49fb44 1130 SUPERFAMILY SSF52540 233 410 9.91E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS01045 bb2b0b8f2adc4a117811a8c0bf49fb44 1130 SUPERFAMILY SSF48452 843 1000 2.73E-12 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS01045 bb2b0b8f2adc4a117811a8c0bf49fb44 1130 Gene3D G3DSA:3.40.50.300 231 385 2.6E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS01045 bb2b0b8f2adc4a117811a8c0bf49fb44 1130 PANTHER PTHR19871 3 584 1.7E-57 T 22-04-2016 SMGD1_RS01045 bb2b0b8f2adc4a117811a8c0bf49fb44 1130 SUPERFAMILY SSF48452 706 826 2.8E-11 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS01045 bb2b0b8f2adc4a117811a8c0bf49fb44 1130 Pfam PF13374 Tetratricopeptide repeat 751 785 0.0011 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS01045 bb2b0b8f2adc4a117811a8c0bf49fb44 1130 Pfam PF13374 Tetratricopeptide repeat 936 972 1.0E-4 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS01045 bb2b0b8f2adc4a117811a8c0bf49fb44 1130 Pfam PF13374 Tetratricopeptide repeat 889 925 0.0016 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS01045 bb2b0b8f2adc4a117811a8c0bf49fb44 1130 Pfam PF13374 Tetratricopeptide repeat 1026 1063 4.0E-4 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS01045 bb2b0b8f2adc4a117811a8c0bf49fb44 1130 Pfam PF13374 Tetratricopeptide repeat 844 877 8.0E-4 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS01045 bb2b0b8f2adc4a117811a8c0bf49fb44 1130 SUPERFAMILY SSF48452 980 1121 5.08E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS01045 bb2b0b8f2adc4a117811a8c0bf49fb44 1130 Gene3D G3DSA:1.25.40.10 706 857 2.1E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS01045 bb2b0b8f2adc4a117811a8c0bf49fb44 1130 Gene3D G3DSA:1.25.40.10 992 1126 3.6E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS07585 5bb555df3c02202b9fbf82f800442af1 174 Pfam PF05751 FixH 15 150 1.9E-12 T 22-04-2016 IPR008620 Nitrogen fixation protein FixH SMGD1_RS07585 5bb555df3c02202b9fbf82f800442af1 174 Gene3D G3DSA:2.60.40.920 85 155 8.9E-4 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain SMGD1_RS10450 42272d56b9621434ec90d56c25bc7250 419 Gene3D G3DSA:3.40.50.2300 14 152 1.2E-31 T 22-04-2016 SMGD1_RS10450 42272d56b9621434ec90d56c25bc7250 419 SUPERFAMILY SSF52172 15 170 1.42E-32 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS10450 42272d56b9621434ec90d56c25bc7250 419 Pfam PF00072 Response regulator receiver domain 17 122 1.2E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS10450 42272d56b9621434ec90d56c25bc7250 419 PANTHER PTHR26402 221 236 4.7E-23 T 22-04-2016 SMGD1_RS10450 42272d56b9621434ec90d56c25bc7250 419 PANTHER PTHR26402 15 144 4.7E-23 T 22-04-2016 SMGD1_RS10450 42272d56b9621434ec90d56c25bc7250 419 Gene3D G3DSA:3.30.450.20 153 263 6.8E-5 T 22-04-2016 SMGD1_RS10450 42272d56b9621434ec90d56c25bc7250 419 SMART SM00448 15 126 2.6E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS07305 a26f50616c82ae6211ce5fe90253ee65 184 Hamap MF_01521 Probable manganese efflux pump MntP [mntP]. 1 180 23.361 T 22-04-2016 IPR022929 Putative manganese efflux pump MntP SMGD1_RS07305 a26f50616c82ae6211ce5fe90253ee65 184 PANTHER PTHR35529 1 184 9.2E-55 T 22-04-2016 SMGD1_RS07305 a26f50616c82ae6211ce5fe90253ee65 184 Pfam PF02659 Putative manganese efflux pump 31 177 7.8E-45 T 22-04-2016 IPR003810 Putative manganese efflux pump SMGD1_RS03000 033edadff72d8ddd43def7171413c3cd 165 Gene3D G3DSA:3.10.50.30 76 158 9.2E-29 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 SMGD1_RS03000 033edadff72d8ddd43def7171413c3cd 165 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 6 156 2.3E-53 T 22-04-2016 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 SMGD1_RS03000 033edadff72d8ddd43def7171413c3cd 165 PANTHER PTHR30437 1 164 3.0E-56 T 22-04-2016 SMGD1_RS03000 033edadff72d8ddd43def7171413c3cd 165 Gene3D G3DSA:1.10.287.180 4 75 1.4E-27 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 SMGD1_RS03000 033edadff72d8ddd43def7171413c3cd 165 Hamap MF_00105 Transcription elongation factor GreA [greA]. 3 156 29.218 T 22-04-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 SMGD1_RS03000 033edadff72d8ddd43def7171413c3cd 165 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 84 157 1.8E-25 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 SMGD1_RS03000 033edadff72d8ddd43def7171413c3cd 165 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 18 49 - T 22-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 SMGD1_RS03000 033edadff72d8ddd43def7171413c3cd 165 Pfam PF03449 Transcription elongation factor, N-terminal 6 73 4.2E-26 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 SMGD1_RS03000 033edadff72d8ddd43def7171413c3cd 165 PIRSF PIRSF006092 1 159 3.3E-46 T 22-04-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 SMGD1_RS03000 033edadff72d8ddd43def7171413c3cd 165 SUPERFAMILY SSF46557 5 79 7.19E-25 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 SMGD1_RS03000 033edadff72d8ddd43def7171413c3cd 165 SUPERFAMILY SSF54534 82 158 9.68E-22 T 22-04-2016 SMGD1_RS03040 6b3f5ef6803f8f75947b416251032273 213 PANTHER PTHR10953:SF145 1 144 8.1E-31 T 22-04-2016 SMGD1_RS03040 6b3f5ef6803f8f75947b416251032273 213 PANTHER PTHR10953:SF145 170 186 8.1E-31 T 22-04-2016 SMGD1_RS03040 6b3f5ef6803f8f75947b416251032273 213 Gene3D G3DSA:3.40.50.720 2 212 1.1E-30 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS03040 6b3f5ef6803f8f75947b416251032273 213 PANTHER PTHR10953 1 144 8.1E-31 T 22-04-2016 SMGD1_RS03040 6b3f5ef6803f8f75947b416251032273 213 PANTHER PTHR10953 170 186 8.1E-31 T 22-04-2016 SMGD1_RS03040 6b3f5ef6803f8f75947b416251032273 213 SUPERFAMILY SSF69572 2 212 1.96E-43 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 SMGD1_RS03040 6b3f5ef6803f8f75947b416251032273 213 Pfam PF00899 ThiF family 7 210 1.4E-23 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 SMGD1_RS08190 e9ba9d48835f0078bfa80d7656067a7e 106 ProSitePatterns PS00194 Thioredoxin family active site. 22 40 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 SMGD1_RS08190 e9ba9d48835f0078bfa80d7656067a7e 106 Gene3D G3DSA:3.40.30.10 2 105 1.7E-39 T 22-04-2016 IPR012336 Thioredoxin-like fold SMGD1_RS08190 e9ba9d48835f0078bfa80d7656067a7e 106 PRINTS PR00421 Thioredoxin family signature 21 29 6.0E-10 T 22-04-2016 SMGD1_RS08190 e9ba9d48835f0078bfa80d7656067a7e 106 PRINTS PR00421 Thioredoxin family signature 69 80 6.0E-10 T 22-04-2016 SMGD1_RS08190 e9ba9d48835f0078bfa80d7656067a7e 106 PRINTS PR00421 Thioredoxin family signature 29 38 6.0E-10 T 22-04-2016 SMGD1_RS08190 e9ba9d48835f0078bfa80d7656067a7e 106 PIRSF PIRSF000077 1 105 3.8E-40 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 SMGD1_RS08190 e9ba9d48835f0078bfa80d7656067a7e 106 Pfam PF00085 Thioredoxin 5 103 2.6E-33 T 22-04-2016 IPR013766 Thioredoxin domain GO:0045454 SMGD1_RS08190 e9ba9d48835f0078bfa80d7656067a7e 106 TIGRFAM TIGR01068 thioredoxin: thioredoxin 10 103 6.6E-39 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 SMGD1_RS08190 e9ba9d48835f0078bfa80d7656067a7e 106 SUPERFAMILY SSF52833 2 105 1.75E-39 T 22-04-2016 IPR012336 Thioredoxin-like fold SMGD1_RS08190 e9ba9d48835f0078bfa80d7656067a7e 106 PANTHER PTHR10438:SF290 22 102 5.7E-42 T 22-04-2016 SMGD1_RS08190 e9ba9d48835f0078bfa80d7656067a7e 106 PANTHER PTHR10438 22 102 5.7E-42 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 SMGD1_RS11640 c11d462ace1800f88f34646027e6e25e 474 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 2 473 1.9E-178 T 22-04-2016 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 SMGD1_RS11640 c11d462ace1800f88f34646027e6e25e 474 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 141 155 - T 22-04-2016 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 SMGD1_RS11640 c11d462ace1800f88f34646027e6e25e 474 SUPERFAMILY SSF89095 296 397 6.41E-27 T 22-04-2016 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 SMGD1_RS11640 c11d462ace1800f88f34646027e6e25e 474 Pfam PF02637 GatB domain 328 473 2.2E-47 T 22-04-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 SMGD1_RS11640 c11d462ace1800f88f34646027e6e25e 474 SMART SM00845 327 473 1.2E-69 T 22-04-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 SMGD1_RS11640 c11d462ace1800f88f34646027e6e25e 474 PANTHER PTHR11659:SF0 2 473 8.2E-225 T 22-04-2016 SMGD1_RS11640 c11d462ace1800f88f34646027e6e25e 474 PANTHER PTHR11659 2 473 8.2E-225 T 22-04-2016 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E GO:0016884 SMGD1_RS11640 c11d462ace1800f88f34646027e6e25e 474 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 1 474 36.114 T 22-04-2016 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 SMGD1_RS11640 c11d462ace1800f88f34646027e6e25e 474 SUPERFAMILY SSF55931 3 292 4.19E-115 T 22-04-2016 SMGD1_RS11640 c11d462ace1800f88f34646027e6e25e 474 Pfam PF02934 GatB/GatE catalytic domain 4 288 1.5E-109 T 22-04-2016 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 SMGD1_RS12405 011ecf94bef59cfbb5dbf158c24e0cc0 94 SUPERFAMILY SSF46626 22 89 3.45E-10 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS12405 011ecf94bef59cfbb5dbf158c24e0cc0 94 Gene3D G3DSA:1.10.760.10 18 90 4.7E-11 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS07240 c16dd33bfd0572d2c18e93cf79973aba 178 SMART SM01322 1 174 2.5E-85 T 22-04-2016 IPR009822 YaeQ SMGD1_RS07240 c16dd33bfd0572d2c18e93cf79973aba 178 Gene3D G3DSA:3.10.640.10 1 176 1.9E-70 T 22-04-2016 SMGD1_RS07240 c16dd33bfd0572d2c18e93cf79973aba 178 Pfam PF07152 YaeQ protein 1 170 1.0E-65 T 22-04-2016 IPR009822 YaeQ SMGD1_RS07240 c16dd33bfd0572d2c18e93cf79973aba 178 PANTHER PTHR38784:SF1 1 178 4.0E-65 T 22-04-2016 SMGD1_RS07240 c16dd33bfd0572d2c18e93cf79973aba 178 PANTHER PTHR38784 1 178 4.0E-65 T 22-04-2016 SMGD1_RS07240 c16dd33bfd0572d2c18e93cf79973aba 178 PIRSF PIRSF011484 1 178 1.8E-62 T 22-04-2016 IPR009822 YaeQ SMGD1_RS07240 c16dd33bfd0572d2c18e93cf79973aba 178 SUPERFAMILY SSF52980 4 176 6.7E-64 T 22-04-2016 IPR011335 Restriction endonuclease type II-like SMGD1_RS04040 84ad6ba88904a533d7e912a1674cbbac 125 SUPERFAMILY SSF52172 5 123 1.71E-30 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS04040 84ad6ba88904a533d7e912a1674cbbac 125 Gene3D G3DSA:3.40.50.2300 2 123 1.9E-34 T 22-04-2016 SMGD1_RS04040 84ad6ba88904a533d7e912a1674cbbac 125 SMART SM00448 6 120 2.3E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS04040 84ad6ba88904a533d7e912a1674cbbac 125 Pfam PF00072 Response regulator receiver domain 8 120 1.4E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS04040 84ad6ba88904a533d7e912a1674cbbac 125 PANTHER PTHR26402 6 124 4.8E-31 T 22-04-2016 SMGD1_RS13095 d9460958433e57185681c0aecae66135 422 Pfam PF04963 Sigma-54 factor, core binding domain 79 259 3.7E-32 T 22-04-2016 IPR007046 RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0006352 SMGD1_RS13095 d9460958433e57185681c0aecae66135 422 PIRSF PIRSF000774 1 419 1.2E-73 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 SMGD1_RS13095 d9460958433e57185681c0aecae66135 422 PRINTS PR00045 Sigma-54 factor signature 337 348 1.5E-16 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 SMGD1_RS13095 d9460958433e57185681c0aecae66135 422 PRINTS PR00045 Sigma-54 factor signature 321 333 1.5E-16 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 SMGD1_RS13095 d9460958433e57185681c0aecae66135 422 PRINTS PR00045 Sigma-54 factor signature 392 410 1.5E-16 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 SMGD1_RS13095 d9460958433e57185681c0aecae66135 422 PRINTS PR00045 Sigma-54 factor signature 153 170 1.5E-16 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 SMGD1_RS13095 d9460958433e57185681c0aecae66135 422 PANTHER PTHR32248 72 419 1.4E-65 T 22-04-2016 SMGD1_RS13095 d9460958433e57185681c0aecae66135 422 PANTHER PTHR32248:SF4 72 419 1.4E-65 T 22-04-2016 SMGD1_RS13095 d9460958433e57185681c0aecae66135 422 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 5 50 5.9E-8 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 SMGD1_RS13095 d9460958433e57185681c0aecae66135 422 Pfam PF04552 Sigma-54, DNA binding domain 264 417 1.2E-47 T 22-04-2016 IPR007634 RNA polymerase sigma factor 54, DNA-binding SMGD1_RS13095 d9460958433e57185681c0aecae66135 422 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 11 416 6.1E-100 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 SMGD1_RS13095 d9460958433e57185681c0aecae66135 422 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 397 404 - T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 SMGD1_RS01955 7f3032033ab30207a23df4182a130e38 974 SMART SM00091 609 675 2.8E-10 T 22-04-2016 IPR000014 PAS domain SMGD1_RS01955 7f3032033ab30207a23df4182a130e38 974 SMART SM00091 469 539 24.0 T 22-04-2016 IPR000014 PAS domain SMGD1_RS01955 7f3032033ab30207a23df4182a130e38 974 SMART SM00091 341 409 110.0 T 22-04-2016 IPR000014 PAS domain SMGD1_RS01955 7f3032033ab30207a23df4182a130e38 974 SUPERFAMILY SSF55785 620 735 7.33E-21 T 22-04-2016 IPR000014 PAS domain SMGD1_RS01955 7f3032033ab30207a23df4182a130e38 974 Pfam PF13188 PAS domain 470 511 1.5E-4 T 22-04-2016 IPR000014 PAS domain SMGD1_RS01955 7f3032033ab30207a23df4182a130e38 974 Pfam PF13426 PAS domain 620 725 2.6E-12 T 22-04-2016 IPR000014 PAS domain SMGD1_RS01955 7f3032033ab30207a23df4182a130e38 974 SUPERFAMILY SSF47384 743 816 1.08E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS01955 7f3032033ab30207a23df4182a130e38 974 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 389 463 8.7E-7 T 22-04-2016 IPR000014 PAS domain SMGD1_RS01955 7f3032033ab30207a23df4182a130e38 974 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 606 732 2.8E-21 T 22-04-2016 IPR000014 PAS domain SMGD1_RS01955 7f3032033ab30207a23df4182a130e38 974 Pfam PF08447 PAS fold 364 450 8.4E-17 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 SMGD1_RS01955 7f3032033ab30207a23df4182a130e38 974 Gene3D G3DSA:3.30.565.10 823 968 3.0E-30 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS01955 7f3032033ab30207a23df4182a130e38 974 SUPERFAMILY SSF55874 821 968 9.17E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS01955 7f3032033ab30207a23df4182a130e38 974 Gene3D G3DSA:3.30.450.20 606 723 2.7E-21 T 22-04-2016 SMGD1_RS01955 7f3032033ab30207a23df4182a130e38 974 PANTHER PTHR24423 315 472 9.4E-71 T 22-04-2016 SMGD1_RS01955 7f3032033ab30207a23df4182a130e38 974 PANTHER PTHR24423 607 972 9.4E-71 T 22-04-2016 SMGD1_RS01955 7f3032033ab30207a23df4182a130e38 974 Gene3D G3DSA:3.30.450.20 459 505 4.6E-7 T 22-04-2016 SMGD1_RS01955 7f3032033ab30207a23df4182a130e38 974 Gene3D G3DSA:1.10.287.130 744 812 1.4E-4 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS01955 7f3032033ab30207a23df4182a130e38 974 Gene3D G3DSA:3.30.450.20 334 458 1.6E-24 T 22-04-2016 SMGD1_RS01955 7f3032033ab30207a23df4182a130e38 974 Pfam PF14827 Double sensory domain of two-component sensor kinase 73 285 1.0E-16 T 22-04-2016 IPR029150 Double Cache domain 3 SMGD1_RS01955 7f3032033ab30207a23df4182a130e38 974 PRINTS PR00344 Bacterial sensor protein C-terminal signature 917 927 2.1E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS01955 7f3032033ab30207a23df4182a130e38 974 PRINTS PR00344 Bacterial sensor protein C-terminal signature 899 913 2.1E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS01955 7f3032033ab30207a23df4182a130e38 974 PRINTS PR00344 Bacterial sensor protein C-terminal signature 954 967 2.1E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS01955 7f3032033ab30207a23df4182a130e38 974 PRINTS PR00344 Bacterial sensor protein C-terminal signature 930 948 2.1E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS01955 7f3032033ab30207a23df4182a130e38 974 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 863 968 1.3E-15 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS01955 7f3032033ab30207a23df4182a130e38 974 SMART SM00387 858 970 2.3E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS01955 7f3032033ab30207a23df4182a130e38 974 SUPERFAMILY SSF55785 453 509 3.49E-6 T 22-04-2016 IPR000014 PAS domain SMGD1_RS01955 7f3032033ab30207a23df4182a130e38 974 SUPERFAMILY SSF55785 350 459 2.28E-14 T 22-04-2016 IPR000014 PAS domain SMGD1_RS01955 7f3032033ab30207a23df4182a130e38 974 SUPERFAMILY SSF103190 56 188 2.59E-10 T 22-04-2016 IPR029151 Periplasmic sensor domain-like SMGD1_RS00390 45e9e3f57891e8aa45f63846703d539b 304 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 6 302 1.3E-97 T 22-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 SMGD1_RS00390 45e9e3f57891e8aa45f63846703d539b 304 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 2 304 27.831 T 22-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 SMGD1_RS00390 45e9e3f57891e8aa45f63846703d539b 304 PANTHER PTHR30004 1 301 3.8E-91 T 22-04-2016 SMGD1_RS00390 45e9e3f57891e8aa45f63846703d539b 304 Gene3D G3DSA:3.40.718.10 2 302 5.8E-109 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 SMGD1_RS00390 45e9e3f57891e8aa45f63846703d539b 304 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 30 300 2.9E-96 T 22-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 SMGD1_RS00390 45e9e3f57891e8aa45f63846703d539b 304 PANTHER PTHR30004:SF6 1 301 3.8E-91 T 22-04-2016 SMGD1_RS00390 45e9e3f57891e8aa45f63846703d539b 304 SUPERFAMILY SSF53659 4 302 3.04E-85 T 22-04-2016 SMGD1_RS02640 e549cc9b5293fe9ae2e398374a339409 653 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 413 648 8.1E-42 T 22-04-2016 SMGD1_RS02640 e549cc9b5293fe9ae2e398374a339409 653 SMART SM01007 19 220 1.9E-30 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal SMGD1_RS02640 e549cc9b5293fe9ae2e398374a339409 653 Gene3D G3DSA:3.40.50.720 385 648 1.6E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS02640 e549cc9b5293fe9ae2e398374a339409 653 SUPERFAMILY SSF51735 406 648 9.77E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS02640 e549cc9b5293fe9ae2e398374a339409 653 SUPERFAMILY SSF53639 17 226 1.28E-32 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal SMGD1_RS02640 e549cc9b5293fe9ae2e398374a339409 653 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 476 487 3.4E-19 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMGD1_RS02640 e549cc9b5293fe9ae2e398374a339409 653 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 408 425 3.4E-19 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMGD1_RS02640 e549cc9b5293fe9ae2e398374a339409 653 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 550 569 3.4E-19 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMGD1_RS02640 e549cc9b5293fe9ae2e398374a339409 653 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 571 588 3.4E-19 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMGD1_RS02640 e549cc9b5293fe9ae2e398374a339409 653 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 21 220 3.8E-27 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal SMGD1_RS02640 e549cc9b5293fe9ae2e398374a339409 653 Gene3D G3DSA:3.40.225.10 20 226 2.0E-32 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal SMGD1_RS02640 e549cc9b5293fe9ae2e398374a339409 653 PANTHER PTHR24322 550 581 8.2E-44 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMGD1_RS02640 e549cc9b5293fe9ae2e398374a339409 653 PANTHER PTHR24322 411 534 8.2E-44 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMGD1_RS10995 ebcfe9b822a1a8ea786410056f7a01f3 227 SUPERFAMILY SSF88659 146 224 2.62E-15 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMGD1_RS10995 ebcfe9b822a1a8ea786410056f7a01f3 227 Gene3D G3DSA:1.10.10.10 90 138 7.5E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMGD1_RS10995 ebcfe9b822a1a8ea786410056f7a01f3 227 PRINTS PR00046 Major sigma-70 factor signature 87 100 4.4E-6 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMGD1_RS10995 ebcfe9b822a1a8ea786410056f7a01f3 227 PRINTS PR00046 Major sigma-70 factor signature 195 210 4.4E-6 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMGD1_RS10995 ebcfe9b822a1a8ea786410056f7a01f3 227 PRINTS PR00046 Major sigma-70 factor signature 178 190 4.4E-6 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMGD1_RS10995 ebcfe9b822a1a8ea786410056f7a01f3 227 PRINTS PR00046 Major sigma-70 factor signature 210 221 4.4E-6 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMGD1_RS10995 ebcfe9b822a1a8ea786410056f7a01f3 227 Pfam PF04545 Sigma-70, region 4 179 223 7.0E-14 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMGD1_RS10995 ebcfe9b822a1a8ea786410056f7a01f3 227 SUPERFAMILY SSF88659 89 161 1.49E-8 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMGD1_RS10995 ebcfe9b822a1a8ea786410056f7a01f3 227 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 195 221 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMGD1_RS10995 ebcfe9b822a1a8ea786410056f7a01f3 227 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 18 224 5.0E-58 T 22-04-2016 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 SMGD1_RS10995 ebcfe9b822a1a8ea786410056f7a01f3 227 Gene3D G3DSA:1.10.10.10 171 223 1.8E-9 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMGD1_RS10995 ebcfe9b822a1a8ea786410056f7a01f3 227 SUPERFAMILY SSF88946 13 87 3.92E-15 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMGD1_RS10995 ebcfe9b822a1a8ea786410056f7a01f3 227 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 13 223 1.5E-25 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMGD1_RS10995 ebcfe9b822a1a8ea786410056f7a01f3 227 PANTHER PTHR30385 13 223 6.2E-24 T 22-04-2016 SMGD1_RS10995 ebcfe9b822a1a8ea786410056f7a01f3 227 Pfam PF04542 Sigma-70 region 2 19 85 7.9E-9 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMGD1_RS10995 ebcfe9b822a1a8ea786410056f7a01f3 227 PANTHER PTHR30385:SF7 13 223 6.2E-24 T 22-04-2016 SMGD1_RS12725 d0060b9f886a187446fbebe84407fc25 188 Gene3D G3DSA:1.10.8.10 145 185 1.5E-6 T 22-04-2016 SMGD1_RS12725 d0060b9f886a187446fbebe84407fc25 188 SUPERFAMILY SSF50249 1 61 6.28E-13 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMGD1_RS12725 d0060b9f886a187446fbebe84407fc25 188 Pfam PF01330 RuvA N terminal domain 1 60 1.6E-17 T 22-04-2016 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 SMGD1_RS12725 d0060b9f886a187446fbebe84407fc25 188 PANTHER PTHR33796 2 188 9.8E-53 T 22-04-2016 SMGD1_RS12725 d0060b9f886a187446fbebe84407fc25 188 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 184 2.7E-46 T 22-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 SMGD1_RS12725 d0060b9f886a187446fbebe84407fc25 188 Pfam PF07499 RuvA, C-terminal domain 146 185 1.3E-9 T 22-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 SMGD1_RS12725 d0060b9f886a187446fbebe84407fc25 188 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 186 26.781 T 22-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 SMGD1_RS12725 d0060b9f886a187446fbebe84407fc25 188 Pfam PF14520 Helix-hairpin-helix domain 70 126 1.8E-13 T 22-04-2016 SMGD1_RS12725 d0060b9f886a187446fbebe84407fc25 188 SMART SM00278 106 125 14.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 SMGD1_RS12725 d0060b9f886a187446fbebe84407fc25 188 SMART SM00278 71 90 3.7 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 SMGD1_RS12725 d0060b9f886a187446fbebe84407fc25 188 Gene3D G3DSA:1.10.150.20 65 128 1.3E-24 T 22-04-2016 SMGD1_RS12725 d0060b9f886a187446fbebe84407fc25 188 Gene3D G3DSA:2.40.50.140 1 63 6.4E-21 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMGD1_RS12725 d0060b9f886a187446fbebe84407fc25 188 SUPERFAMILY SSF46929 144 185 4.19E-5 T 22-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 SMGD1_RS12725 d0060b9f886a187446fbebe84407fc25 188 SUPERFAMILY SSF47781 64 128 2.18E-18 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 SMGD1_RS03685 1c4da01060230f7e20c06481cab1c48b 341 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 10 339 2.7E-125 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 SMGD1_RS03685 1c4da01060230f7e20c06481cab1c48b 341 Gene3D G3DSA:1.10.220.30 3 75 1.1E-11 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical SMGD1_RS03685 1c4da01060230f7e20c06481cab1c48b 341 PANTHER PTHR30534:SF0 1 341 6.4E-81 T 22-04-2016 SMGD1_RS03685 1c4da01060230f7e20c06481cab1c48b 341 Gene3D G3DSA:1.10.220.30 204 338 4.0E-35 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical SMGD1_RS03685 1c4da01060230f7e20c06481cab1c48b 341 Gene3D G3DSA:1.10.220.30 82 197 8.9E-31 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical SMGD1_RS03685 1c4da01060230f7e20c06481cab1c48b 341 PANTHER PTHR30534 1 341 6.4E-81 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 SMGD1_RS03685 1c4da01060230f7e20c06481cab1c48b 341 PIRSF PIRSF003161 8 341 1.4E-112 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 SMGD1_RS03685 1c4da01060230f7e20c06481cab1c48b 341 Pfam PF14842 FliG N-terminal domain 13 114 2.1E-29 T 22-04-2016 IPR028263 Flagellar motor switch protein FliG, N-terminal domain SMGD1_RS03685 1c4da01060230f7e20c06481cab1c48b 341 SUPERFAMILY SSF48029 125 333 1.96E-60 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical SMGD1_RS03685 1c4da01060230f7e20c06481cab1c48b 341 PRINTS PR00954 Flagellar motor switch protein FliG signature 235 255 5.7E-57 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 SMGD1_RS03685 1c4da01060230f7e20c06481cab1c48b 341 PRINTS PR00954 Flagellar motor switch protein FliG signature 14 30 5.7E-57 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 SMGD1_RS03685 1c4da01060230f7e20c06481cab1c48b 341 PRINTS PR00954 Flagellar motor switch protein FliG signature 281 307 5.7E-57 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 SMGD1_RS03685 1c4da01060230f7e20c06481cab1c48b 341 PRINTS PR00954 Flagellar motor switch protein FliG signature 257 277 5.7E-57 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 SMGD1_RS03685 1c4da01060230f7e20c06481cab1c48b 341 PRINTS PR00954 Flagellar motor switch protein FliG signature 124 147 5.7E-57 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 SMGD1_RS03685 1c4da01060230f7e20c06481cab1c48b 341 PRINTS PR00954 Flagellar motor switch protein FliG signature 43 69 5.7E-57 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 SMGD1_RS03685 1c4da01060230f7e20c06481cab1c48b 341 PRINTS PR00954 Flagellar motor switch protein FliG signature 204 229 5.7E-57 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 SMGD1_RS03685 1c4da01060230f7e20c06481cab1c48b 341 SUPERFAMILY SSF48029 5 110 1.44E-18 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical SMGD1_RS03685 1c4da01060230f7e20c06481cab1c48b 341 Pfam PF14841 FliG middle domain 125 198 2.6E-27 T 22-04-2016 IPR032779 Flagellar motor switch protein FliG, middle domain SMGD1_RS03685 1c4da01060230f7e20c06481cab1c48b 341 Pfam PF01706 FliG C-terminal domain 227 333 2.6E-35 T 22-04-2016 IPR023087 Flagellar motor switch protein FliG, C-terminal SMGD1_RS01650 3ae89b566ec6b8118ef665d136a9e2d5 739 Pfam PF00488 MutS domain V 312 490 9.6E-17 T 22-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 SMGD1_RS01650 3ae89b566ec6b8118ef665d136a9e2d5 739 SUPERFAMILY SSF160443 665 739 1.23E-10 T 22-04-2016 IPR002625 Smr domain SMGD1_RS01650 3ae89b566ec6b8118ef665d136a9e2d5 739 Gene3D G3DSA:3.40.50.300 284 493 1.9E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS01650 3ae89b566ec6b8118ef665d136a9e2d5 739 PANTHER PTHR11361 58 580 8.4E-51 T 22-04-2016 SMGD1_RS01650 3ae89b566ec6b8118ef665d136a9e2d5 739 Pfam PF01713 Smr domain 666 739 7.2E-17 T 22-04-2016 IPR002625 Smr domain SMGD1_RS01650 3ae89b566ec6b8118ef665d136a9e2d5 739 PIRSF PIRSF005814 39 739 2.0E-103 T 22-04-2016 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 SMGD1_RS01650 3ae89b566ec6b8118ef665d136a9e2d5 739 SUPERFAMILY SSF52540 282 493 1.74E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS01650 3ae89b566ec6b8118ef665d136a9e2d5 739 Hamap MF_00092 Endonuclease MutS2 [mutS2]. 9 739 18.333 T 22-04-2016 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 SMGD1_RS01650 3ae89b566ec6b8118ef665d136a9e2d5 739 PANTHER PTHR11361:SF14 58 580 8.4E-51 T 22-04-2016 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 SMGD1_RS01650 3ae89b566ec6b8118ef665d136a9e2d5 739 SMART SM00534 308 492 2.7E-31 T 22-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 SMGD1_RS01650 3ae89b566ec6b8118ef665d136a9e2d5 739 SMART SM00463 666 739 6.8E-6 T 22-04-2016 IPR002625 Smr domain SMGD1_RS14215 aad6b300f8bc9b8e4c10193ea678bd4f 265 Pfam PF00520 Ion transport protein 13 228 2.7E-40 T 22-04-2016 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 SMGD1_RS14215 aad6b300f8bc9b8e4c10193ea678bd4f 265 SUPERFAMILY SSF81324 14 225 1.49E-27 T 22-04-2016 SMGD1_RS14215 aad6b300f8bc9b8e4c10193ea678bd4f 265 Gene3D G3DSA:1.20.120.350 2 109 3.1E-9 T 22-04-2016 IPR027359 Voltage-dependent channel, four helix bundle domain SMGD1_RS14215 aad6b300f8bc9b8e4c10193ea678bd4f 265 PANTHER PTHR10037 5 219 1.4E-43 T 22-04-2016 SMGD1_RS04595 b5ae3044ab2c86fc5509bd3f46daf21a 518 PANTHER PTHR23026 101 119 3.6E-56 T 22-04-2016 SMGD1_RS04595 b5ae3044ab2c86fc5509bd3f46daf21a 518 PANTHER PTHR23026 331 516 3.6E-56 T 22-04-2016 SMGD1_RS04595 b5ae3044ab2c86fc5509bd3f46daf21a 518 PANTHER PTHR23026 71 84 3.6E-56 T 22-04-2016 SMGD1_RS04595 b5ae3044ab2c86fc5509bd3f46daf21a 518 Pfam PF00881 Nitroreductase family 72 224 5.3E-8 T 22-04-2016 IPR029479 Nitroreductase SMGD1_RS04595 b5ae3044ab2c86fc5509bd3f46daf21a 518 Pfam PF00881 Nitroreductase family 429 502 1.7E-8 T 22-04-2016 IPR029479 Nitroreductase SMGD1_RS04595 b5ae3044ab2c86fc5509bd3f46daf21a 518 SUPERFAMILY SSF55469 150 227 3.93E-7 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 SMGD1_RS04595 b5ae3044ab2c86fc5509bd3f46daf21a 518 SUPERFAMILY SSF55469 98 117 3.93E-7 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 SMGD1_RS04595 b5ae3044ab2c86fc5509bd3f46daf21a 518 PANTHER PTHR23026:SF102 101 119 3.6E-56 T 22-04-2016 SMGD1_RS04595 b5ae3044ab2c86fc5509bd3f46daf21a 518 PANTHER PTHR23026:SF102 331 516 3.6E-56 T 22-04-2016 SMGD1_RS04595 b5ae3044ab2c86fc5509bd3f46daf21a 518 PANTHER PTHR23026:SF102 71 84 3.6E-56 T 22-04-2016 SMGD1_RS04595 b5ae3044ab2c86fc5509bd3f46daf21a 518 SUPERFAMILY SSF55469 394 516 1.83E-11 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 SMGD1_RS04595 b5ae3044ab2c86fc5509bd3f46daf21a 518 Gene3D G3DSA:3.40.109.10 395 503 5.8E-10 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 SMGD1_RS04595 b5ae3044ab2c86fc5509bd3f46daf21a 518 Gene3D G3DSA:3.40.109.10 71 225 1.5E-6 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 SMGD1_RS03595 34aaa3c905be886ada4d7a7485186828 443 Gene3D G3DSA:3.90.226.10 417 437 2.7E-64 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SMGD1_RS03595 34aaa3c905be886ada4d7a7485186828 443 Gene3D G3DSA:3.90.226.10 186 366 2.7E-64 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SMGD1_RS03595 34aaa3c905be886ada4d7a7485186828 443 SUPERFAMILY SSF52096 195 368 1.08E-74 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SMGD1_RS03595 34aaa3c905be886ada4d7a7485186828 443 SUPERFAMILY SSF52096 41 121 1.08E-74 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SMGD1_RS03595 34aaa3c905be886ada4d7a7485186828 443 SMART SM00245 176 364 6.8E-73 T 22-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 SMGD1_RS03595 34aaa3c905be886ada4d7a7485186828 443 PANTHER PTHR32060 57 432 1.0E-108 T 22-04-2016 SMGD1_RS03595 34aaa3c905be886ada4d7a7485186828 443 PANTHER PTHR32060:SF0 57 432 1.0E-108 T 22-04-2016 SMGD1_RS03595 34aaa3c905be886ada4d7a7485186828 443 Gene3D G3DSA:2.30.42.10 109 185 5.9E-25 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SMGD1_RS03595 34aaa3c905be886ada4d7a7485186828 443 Pfam PF03572 Peptidase family S41 201 363 1.3E-53 T 22-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 SMGD1_RS03595 34aaa3c905be886ada4d7a7485186828 443 SUPERFAMILY SSF50156 81 202 1.71E-24 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SMGD1_RS03595 34aaa3c905be886ada4d7a7485186828 443 SMART SM00228 103 174 1.0E-16 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SMGD1_RS03595 34aaa3c905be886ada4d7a7485186828 443 Gene3D G3DSA:3.30.750.44 58 108 5.1E-7 T 22-04-2016 SMGD1_RS03595 34aaa3c905be886ada4d7a7485186828 443 Pfam PF13180 PDZ domain 103 182 1.0E-12 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SMGD1_RS03595 34aaa3c905be886ada4d7a7485186828 443 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 62 378 7.0E-105 T 22-04-2016 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 SMGD1_RS01335 d565268d86d0264f3eb93a9f3e7e7980 94 Pfam PF01527 Transposase 5 72 1.5E-14 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SMGD1_RS01335 d565268d86d0264f3eb93a9f3e7e7980 94 PANTHER PTHR33215 1 90 1.5E-21 T 22-04-2016 SMGD1_RS01335 d565268d86d0264f3eb93a9f3e7e7980 94 SUPERFAMILY SSF46689 1 91 3.58E-20 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SMGD1_RS01335 d565268d86d0264f3eb93a9f3e7e7980 94 Gene3D G3DSA:1.10.10.60 7 88 2.3E-21 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SMGD1_RS06295 2f66d0678349b054c8835978c05df74b 600 PRINTS PR00315 GTP-binding elongation factor signature 70 80 2.23E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMGD1_RS06295 2f66d0678349b054c8835978c05df74b 600 PRINTS PR00315 GTP-binding elongation factor signature 6 19 2.23E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMGD1_RS06295 2f66d0678349b054c8835978c05df74b 600 PRINTS PR00315 GTP-binding elongation factor signature 122 131 2.23E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMGD1_RS06295 2f66d0678349b054c8835978c05df74b 600 PRINTS PR00315 GTP-binding elongation factor signature 50 58 2.23E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMGD1_RS06295 2f66d0678349b054c8835978c05df74b 600 Pfam PF00679 Elongation factor G C-terminus 394 478 8.7E-21 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain SMGD1_RS06295 2f66d0678349b054c8835978c05df74b 600 SUPERFAMILY SSF50447 151 299 8.05E-32 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain SMGD1_RS06295 2f66d0678349b054c8835978c05df74b 600 Gene3D G3DSA:3.30.70.870 303 397 9.3E-27 T 22-04-2016 SMGD1_RS06295 2f66d0678349b054c8835978c05df74b 600 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 43 58 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site SMGD1_RS06295 2f66d0678349b054c8835978c05df74b 600 Pfam PF00009 Elongation factor Tu GTP binding domain 3 194 9.0E-55 T 22-04-2016 SMGD1_RS06295 2f66d0678349b054c8835978c05df74b 600 Gene3D G3DSA:2.40.30.10 205 302 1.2E-29 T 22-04-2016 SMGD1_RS06295 2f66d0678349b054c8835978c05df74b 600 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 4 596 5.9E-276 T 22-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 SMGD1_RS06295 2f66d0678349b054c8835978c05df74b 600 Gene3D G3DSA:3.40.50.300 2 204 1.3E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS06295 2f66d0678349b054c8835978c05df74b 600 SUPERFAMILY SSF52540 2 218 1.64E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS06295 2f66d0678349b054c8835978c05df74b 600 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 3 139 7.3E-24 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SMGD1_RS06295 2f66d0678349b054c8835978c05df74b 600 PANTHER PTHR23115 2 589 7.0E-264 T 22-04-2016 SMGD1_RS06295 2f66d0678349b054c8835978c05df74b 600 Gene3D G3DSA:3.30.70.240 398 478 6.2E-30 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain SMGD1_RS06295 2f66d0678349b054c8835978c05df74b 600 SUPERFAMILY SSF54980 396 509 7.67E-25 T 22-04-2016 IPR009022 Elongation factor G, III-V domain SMGD1_RS06295 2f66d0678349b054c8835978c05df74b 600 SUPERFAMILY SSF54980 302 385 8.63E-10 T 22-04-2016 IPR009022 Elongation factor G, III-V domain SMGD1_RS06295 2f66d0678349b054c8835978c05df74b 600 Gene3D G3DSA:2.40.50.250 480 574 1.0E-36 T 22-04-2016 SMGD1_RS06295 2f66d0678349b054c8835978c05df74b 600 PANTHER PTHR23115:SF14 2 589 7.0E-264 T 22-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 SMGD1_RS06295 2f66d0678349b054c8835978c05df74b 600 Pfam PF03144 Elongation factor Tu domain 2 222 288 2.5E-12 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 SMGD1_RS14115 390ff4a138e711a7f8fc0e4813d179a5 479 SUPERFAMILY SSF58104 85 110 1.29E-53 T 22-04-2016 SMGD1_RS14115 390ff4a138e711a7f8fc0e4813d179a5 479 SUPERFAMILY SSF58104 156 380 1.29E-53 T 22-04-2016 SMGD1_RS14115 390ff4a138e711a7f8fc0e4813d179a5 479 Pfam PF13682 Chemoreceptor zinc-binding domain 367 427 2.3E-11 T 22-04-2016 IPR025991 Chemoreceptor zinc-binding domain UniPathway: UPA00599 SMGD1_RS14115 390ff4a138e711a7f8fc0e4813d179a5 479 PANTHER PTHR32089 21 148 1.3E-55 T 22-04-2016 SMGD1_RS14115 390ff4a138e711a7f8fc0e4813d179a5 479 PANTHER PTHR32089 176 357 1.3E-55 T 22-04-2016 SMGD1_RS14115 390ff4a138e711a7f8fc0e4813d179a5 479 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 195 345 9.1E-37 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SMGD1_RS14115 390ff4a138e711a7f8fc0e4813d179a5 479 SMART SM00283 141 369 1.7E-24 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SMGD1_RS14115 390ff4a138e711a7f8fc0e4813d179a5 479 Gene3D G3DSA:1.10.287.950 174 355 3.3E-51 T 22-04-2016 SMGD1_RS00580 c98249f4c479e66517b75cc0e58cad69 565 PANTHER PTHR24960:SF43 421 554 3.7E-23 T 22-04-2016 SMGD1_RS00580 c98249f4c479e66517b75cc0e58cad69 565 PANTHER PTHR24960:SF43 175 264 3.7E-23 T 22-04-2016 SMGD1_RS00580 c98249f4c479e66517b75cc0e58cad69 565 Gene3D G3DSA:3.30.70.20 432 481 4.5E-13 T 22-04-2016 SMGD1_RS00580 c98249f4c479e66517b75cc0e58cad69 565 Gene3D G3DSA:3.30.70.20 190 269 1.1E-13 T 22-04-2016 SMGD1_RS00580 c98249f4c479e66517b75cc0e58cad69 565 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 460 471 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SMGD1_RS00580 c98249f4c479e66517b75cc0e58cad69 565 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 243 254 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SMGD1_RS00580 c98249f4c479e66517b75cc0e58cad69 565 Pfam PF12838 4Fe-4S dicluster domain 215 257 2.0E-7 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SMGD1_RS00580 c98249f4c479e66517b75cc0e58cad69 565 SUPERFAMILY SSF54862 191 264 7.39E-27 T 22-04-2016 SMGD1_RS00580 c98249f4c479e66517b75cc0e58cad69 565 SUPERFAMILY SSF54862 423 514 7.39E-27 T 22-04-2016 SMGD1_RS00580 c98249f4c479e66517b75cc0e58cad69 565 PANTHER PTHR24960 421 554 3.7E-23 T 22-04-2016 SMGD1_RS00580 c98249f4c479e66517b75cc0e58cad69 565 PANTHER PTHR24960 175 264 3.7E-23 T 22-04-2016 SMGD1_RS00580 c98249f4c479e66517b75cc0e58cad69 565 Gene3D G3DSA:3.30.70.20 411 431 6.6E-8 T 22-04-2016 SMGD1_RS01680 7547434c03dcba47bb4ef64b926bbc59 629 SUPERFAMILY SSF55874 478 629 7.6E-27 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS01680 7547434c03dcba47bb4ef64b926bbc59 629 Pfam PF07696 7TMR-DISM extracellular 2 43 168 7.5E-12 T 22-04-2016 IPR011622 7TM-DISM receptor, extracellular domain, type 2 SMGD1_RS01680 7547434c03dcba47bb4ef64b926bbc59 629 Pfam PF07695 7TM diverse intracellular signalling 189 381 7.6E-20 T 22-04-2016 IPR011623 7TM-DISM receptor, extracellular domain, type 1 SMGD1_RS01680 7547434c03dcba47bb4ef64b926bbc59 629 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 521 628 2.6E-13 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS01680 7547434c03dcba47bb4ef64b926bbc59 629 PRINTS PR00344 Bacterial sensor protein C-terminal signature 617 629 1.4E-6 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS01680 7547434c03dcba47bb4ef64b926bbc59 629 PRINTS PR00344 Bacterial sensor protein C-terminal signature 593 611 1.4E-6 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS01680 7547434c03dcba47bb4ef64b926bbc59 629 PRINTS PR00344 Bacterial sensor protein C-terminal signature 562 576 1.4E-6 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS01680 7547434c03dcba47bb4ef64b926bbc59 629 SMART SM00387 518 629 5.6E-7 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS01680 7547434c03dcba47bb4ef64b926bbc59 629 Gene3D G3DSA:3.30.565.10 481 629 1.0E-25 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS01680 7547434c03dcba47bb4ef64b926bbc59 629 SUPERFAMILY SSF47384 401 473 6.08E-5 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS01680 7547434c03dcba47bb4ef64b926bbc59 629 PANTHER PTHR24423:SF445 405 629 1.3E-22 T 22-04-2016 SMGD1_RS01680 7547434c03dcba47bb4ef64b926bbc59 629 PANTHER PTHR24423 405 629 1.3E-22 T 22-04-2016 SMGD1_RS05300 1f077371da106b5b8dfd494cdc4e47b7 741 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 3 605 3.6E-240 T 22-04-2016 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 SMGD1_RS05300 1f077371da106b5b8dfd494cdc4e47b7 741 PANTHER PTHR11390:SF27 2 695 1.8E-288 T 22-04-2016 SMGD1_RS05300 1f077371da106b5b8dfd494cdc4e47b7 741 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 370 386 1.9E-33 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SMGD1_RS05300 1f077371da106b5b8dfd494cdc4e47b7 741 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 467 481 1.9E-33 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SMGD1_RS05300 1f077371da106b5b8dfd494cdc4e47b7 741 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 292 301 1.9E-33 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SMGD1_RS05300 1f077371da106b5b8dfd494cdc4e47b7 741 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 77 90 1.9E-33 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SMGD1_RS05300 1f077371da106b5b8dfd494cdc4e47b7 741 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 162 180 1.9E-33 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SMGD1_RS05300 1f077371da106b5b8dfd494cdc4e47b7 741 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 621 655 2.6E-14 T 22-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 SMGD1_RS05300 1f077371da106b5b8dfd494cdc4e47b7 741 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 665 700 8.2E-13 T 22-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 SMGD1_RS05300 1f077371da106b5b8dfd494cdc4e47b7 741 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 569 606 1.2E-14 T 22-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 SMGD1_RS05300 1f077371da106b5b8dfd494cdc4e47b7 741 SUPERFAMILY SSF57783 616 657 7.48E-13 T 22-04-2016 SMGD1_RS05300 1f077371da106b5b8dfd494cdc4e47b7 741 SUPERFAMILY SSF57783 660 696 3.91E-9 T 22-04-2016 SMGD1_RS05300 1f077371da106b5b8dfd494cdc4e47b7 741 Pfam PF01131 DNA topoisomerase 127 541 2.4E-128 T 22-04-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 SMGD1_RS05300 1f077371da106b5b8dfd494cdc4e47b7 741 SMART SM00437 242 504 4.0E-102 T 22-04-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 SMGD1_RS05300 1f077371da106b5b8dfd494cdc4e47b7 741 Gene3D G3DSA:3.30.65.10 575 608 9.4E-13 T 22-04-2016 SMGD1_RS05300 1f077371da106b5b8dfd494cdc4e47b7 741 Gene3D G3DSA:3.30.65.10 660 705 8.3E-10 T 22-04-2016 SMGD1_RS05300 1f077371da106b5b8dfd494cdc4e47b7 741 Gene3D G3DSA:3.30.65.10 613 659 3.6E-19 T 22-04-2016 SMGD1_RS05300 1f077371da106b5b8dfd494cdc4e47b7 741 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 279 301 - T 22-04-2016 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 SMGD1_RS05300 1f077371da106b5b8dfd494cdc4e47b7 741 Gene3D G3DSA:3.40.50.140 2 134 8.8E-44 T 22-04-2016 IPR006171 Toprim domain SMGD1_RS05300 1f077371da106b5b8dfd494cdc4e47b7 741 SUPERFAMILY SSF56712 2 579 2.09E-182 T 22-04-2016 IPR023405 DNA topoisomerase, type IA, core domain SMGD1_RS05300 1f077371da106b5b8dfd494cdc4e47b7 741 SMART SM00493 1 103 3.4E-31 T 22-04-2016 IPR006171 Toprim domain SMGD1_RS05300 1f077371da106b5b8dfd494cdc4e47b7 741 Gene3D G3DSA:1.10.460.10 451 574 6.0E-56 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 SMGD1_RS05300 1f077371da106b5b8dfd494cdc4e47b7 741 Gene3D G3DSA:1.10.460.10 135 182 6.0E-56 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 SMGD1_RS05300 1f077371da106b5b8dfd494cdc4e47b7 741 SUPERFAMILY SSF57783 569 606 8.84E-10 T 22-04-2016 SMGD1_RS05300 1f077371da106b5b8dfd494cdc4e47b7 741 PANTHER PTHR11390 2 695 1.8E-288 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SMGD1_RS05300 1f077371da106b5b8dfd494cdc4e47b7 741 Pfam PF01751 Toprim domain 3 113 6.0E-29 T 22-04-2016 IPR006171 Toprim domain SMGD1_RS05300 1f077371da106b5b8dfd494cdc4e47b7 741 Gene3D G3DSA:2.70.20.10 184 310 2.0E-27 T 22-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 SMGD1_RS05300 1f077371da106b5b8dfd494cdc4e47b7 741 Gene3D G3DSA:2.70.20.10 317 450 2.4E-31 T 22-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 SMGD1_RS05300 1f077371da106b5b8dfd494cdc4e47b7 741 Hamap MF_00952 DNA topoisomerase 1 [topA]. 1 679 52.29 T 22-04-2016 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 SMGD1_RS05300 1f077371da106b5b8dfd494cdc4e47b7 741 SMART SM00436 104 192 1.0E-45 T 22-04-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 SMGD1_RS01580 83ab2b81cbc47dd264e419c5c0fa465b 117 SMART SM00450 25 112 7.4E-13 T 22-04-2016 IPR001763 Rhodanese-like domain SMGD1_RS01580 83ab2b81cbc47dd264e419c5c0fa465b 117 Gene3D G3DSA:3.40.250.10 5 106 1.1E-20 T 22-04-2016 IPR001763 Rhodanese-like domain SMGD1_RS01580 83ab2b81cbc47dd264e419c5c0fa465b 117 Pfam PF00581 Rhodanese-like domain 36 105 1.2E-11 T 22-04-2016 IPR001763 Rhodanese-like domain SMGD1_RS01580 83ab2b81cbc47dd264e419c5c0fa465b 117 SUPERFAMILY SSF52821 9 105 1.96E-22 T 22-04-2016 IPR001763 Rhodanese-like domain SMGD1_RS07930 dab3809e28632ce2f5e1b489ea35fd2b 423 SMART SM00490 258 339 2.2E-31 T 22-04-2016 IPR001650 Helicase, C-terminal SMGD1_RS07930 dab3809e28632ce2f5e1b489ea35fd2b 423 SMART SM00487 20 222 7.5E-63 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SMGD1_RS07930 dab3809e28632ce2f5e1b489ea35fd2b 423 SUPERFAMILY SSF52540 75 360 2.5E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS07930 dab3809e28632ce2f5e1b489ea35fd2b 423 Pfam PF00271 Helicase conserved C-terminal domain 233 339 1.5E-27 T 22-04-2016 IPR001650 Helicase, C-terminal SMGD1_RS07930 dab3809e28632ce2f5e1b489ea35fd2b 423 PANTHER PTHR24031:SF0 1 370 4.7E-188 T 22-04-2016 SMGD1_RS07930 dab3809e28632ce2f5e1b489ea35fd2b 423 PANTHER PTHR24031 1 370 4.7E-188 T 22-04-2016 SMGD1_RS07930 dab3809e28632ce2f5e1b489ea35fd2b 423 Hamap MF_00968 ATP-dependent RNA helicase RhlE [rhlE]. 1 423 48.435 T 22-04-2016 IPR028622 ATP-dependent RNA helicase RhlE GO:0004004|GO:0042255 SMGD1_RS07930 dab3809e28632ce2f5e1b489ea35fd2b 423 Gene3D G3DSA:3.40.50.300 212 373 1.9E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS07930 dab3809e28632ce2f5e1b489ea35fd2b 423 Gene3D G3DSA:3.40.50.300 1 211 2.0E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS07930 dab3809e28632ce2f5e1b489ea35fd2b 423 Pfam PF00270 DEAD/DEAH box helicase 25 196 1.6E-51 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SMGD1_RS07930 dab3809e28632ce2f5e1b489ea35fd2b 423 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 153 161 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site SMGD1_RS04365 707152e5fd753551267fe3a66a70fc8f 187 Pfam PF00293 NUDIX domain 38 166 1.4E-6 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 SMGD1_RS04365 707152e5fd753551267fe3a66a70fc8f 187 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 10 180 6.6E-40 T 22-04-2016 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 SMGD1_RS04365 707152e5fd753551267fe3a66a70fc8f 187 SUPERFAMILY SSF55811 5 182 4.2E-35 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SMGD1_RS04365 707152e5fd753551267fe3a66a70fc8f 187 PANTHER PTHR11839 11 183 1.4E-41 T 22-04-2016 SMGD1_RS04365 707152e5fd753551267fe3a66a70fc8f 187 Gene3D G3DSA:3.90.79.10 6 185 2.6E-50 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SMGD1_RS04365 707152e5fd753551267fe3a66a70fc8f 187 PANTHER PTHR11839:SF1 11 183 1.4E-41 T 22-04-2016 SMGD1_RS11400 7a2907213d048461452cb829db46ae00 465 Gene3D G3DSA:1.10.1140.10 348 464 1.3E-56 T 22-04-2016 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SMGD1_RS11400 7a2907213d048461452cb829db46ae00 465 SUPERFAMILY SSF50615 1 77 3.14E-21 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SMGD1_RS11400 7a2907213d048461452cb829db46ae00 465 PANTHER PTHR15184 1 462 0.0 T 22-04-2016 SMGD1_RS11400 7a2907213d048461452cb829db46ae00 465 SUPERFAMILY SSF52540 79 350 8.32E-93 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS11400 7a2907213d048461452cb829db46ae00 465 PANTHER PTHR15184:SF8 1 462 0.0 T 22-04-2016 SMGD1_RS11400 7a2907213d048461452cb829db46ae00 465 SMART SM00382 144 322 3.6E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain SMGD1_RS11400 7a2907213d048461452cb829db46ae00 465 Gene3D G3DSA:2.40.10.170 2 77 4.1E-27 T 22-04-2016 SMGD1_RS11400 7a2907213d048461452cb829db46ae00 465 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 463 54.68 T 22-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SMGD1_RS11400 7a2907213d048461452cb829db46ae00 465 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 5 75 6.6E-16 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SMGD1_RS11400 7a2907213d048461452cb829db46ae00 465 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 336 345 - T 22-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SMGD1_RS11400 7a2907213d048461452cb829db46ae00 465 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 132 345 6.4E-63 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SMGD1_RS11400 7a2907213d048461452cb829db46ae00 465 Gene3D G3DSA:3.40.50.300 78 347 1.2E-107 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS11400 7a2907213d048461452cb829db46ae00 465 SUPERFAMILY SSF47917 348 463 2.35E-54 T 22-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SMGD1_RS11400 7a2907213d048461452cb829db46ae00 465 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 2 462 1.7E-251 T 22-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SMGD1_RS04095 da5a4ea71c4295602f006ec44ef6c3e9 350 TIGRFAM TIGR00423 TIGR00423: radical SAM domain protein, CofH subfamily 40 346 2.6E-130 T 22-04-2016 IPR020050 FO synthase, subunit 2 GO:0016765 KEGG: 00680+2.5.1.77|MetaCyc: PWY-5198|UniPathway: UPA00072 SMGD1_RS04095 da5a4ea71c4295602f006ec44ef6c3e9 350 Pfam PF04055 Radical SAM superfamily 47 220 1.1E-16 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SMGD1_RS04095 da5a4ea71c4295602f006ec44ef6c3e9 350 PANTHER PTHR22976:SF29 3 349 1.4E-167 T 22-04-2016 SMGD1_RS04095 da5a4ea71c4295602f006ec44ef6c3e9 350 PIRSF PIRSF004762 1 348 7.3E-107 T 22-04-2016 IPR005244 FO synthase, subunit 2-like GO:0016765|GO:0051188|GO:0051539 KEGG: 00680+2.5.1.77|MetaCyc: PWY-5198|UniPathway: UPA00072 SMGD1_RS04095 da5a4ea71c4295602f006ec44ef6c3e9 350 SUPERFAMILY SSF102114 3 336 1.44E-52 T 22-04-2016 SMGD1_RS04095 da5a4ea71c4295602f006ec44ef6c3e9 350 TIGRFAM TIGR03699 menaquin_MqnC: dehypoxanthine futalosine cyclase 3 345 4.6E-152 T 22-04-2016 IPR022431 Cyclic dehypoxanthine futalosine synthase GO:0009234 KEGG: 00130+1.21.98.1|MetaCyc: PWY-7371|MetaCyc: PWY-7374|UniPathway: UPA00079 SMGD1_RS04095 da5a4ea71c4295602f006ec44ef6c3e9 350 Gene3D G3DSA:3.20.20.70 3 336 6.0E-61 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMGD1_RS04095 da5a4ea71c4295602f006ec44ef6c3e9 350 Hamap MF_00992 Cyclic dehypoxanthine futalosine synthase [mqnC]. 2 349 52.558 T 22-04-2016 IPR022431 Cyclic dehypoxanthine futalosine synthase GO:0009234 KEGG: 00130+1.21.98.1|MetaCyc: PWY-7371|MetaCyc: PWY-7374|UniPathway: UPA00079 SMGD1_RS04095 da5a4ea71c4295602f006ec44ef6c3e9 350 PANTHER PTHR22976 3 349 1.4E-167 T 22-04-2016 SMGD1_RS04095 da5a4ea71c4295602f006ec44ef6c3e9 350 SMART SM00729 43 267 0.006 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 SMGD1_RS08680 ca770726864fea7e0a85dcada37fa10f 350 SMART SM00448 1 98 2.4E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS08680 ca770726864fea7e0a85dcada37fa10f 350 PRINTS PR00344 Bacterial sensor protein C-terminal signature 303 313 1.8E-7 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS08680 ca770726864fea7e0a85dcada37fa10f 350 PRINTS PR00344 Bacterial sensor protein C-terminal signature 336 349 1.8E-7 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS08680 ca770726864fea7e0a85dcada37fa10f 350 PRINTS PR00344 Bacterial sensor protein C-terminal signature 285 299 1.8E-7 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS08680 ca770726864fea7e0a85dcada37fa10f 350 PRINTS PR00344 Bacterial sensor protein C-terminal signature 313 331 1.8E-7 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS08680 ca770726864fea7e0a85dcada37fa10f 350 Pfam PF00072 Response regulator receiver domain 7 99 3.7E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS08680 ca770726864fea7e0a85dcada37fa10f 350 PANTHER PTHR26402:SF495 1 343 7.3E-43 T 22-04-2016 SMGD1_RS08680 ca770726864fea7e0a85dcada37fa10f 350 SUPERFAMILY SSF52172 2 115 1.57E-35 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS08680 ca770726864fea7e0a85dcada37fa10f 350 Gene3D G3DSA:3.40.50.2300 7 109 5.4E-36 T 22-04-2016 SMGD1_RS08680 ca770726864fea7e0a85dcada37fa10f 350 PANTHER PTHR26402 1 343 7.3E-43 T 22-04-2016 SMGD1_RS08680 ca770726864fea7e0a85dcada37fa10f 350 SMART SM00387 248 350 9.5E-15 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS08680 ca770726864fea7e0a85dcada37fa10f 350 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 249 348 1.4E-14 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS08680 ca770726864fea7e0a85dcada37fa10f 350 Gene3D G3DSA:3.30.565.10 209 348 2.4E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS08680 ca770726864fea7e0a85dcada37fa10f 350 SUPERFAMILY SSF55874 206 348 3.14E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS06055 9a084ae996587d1c840ccfe231b855ef 392 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 22 392 5.7E-23 T 22-04-2016 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) SMGD1_RS06055 9a084ae996587d1c840ccfe231b855ef 392 PANTHER PTHR35093 1 392 1.3E-39 T 22-04-2016 SMGD1_RS06055 9a084ae996587d1c840ccfe231b855ef 392 SUPERFAMILY SSF56935 24 392 2.88E-49 T 22-04-2016 SMGD1_RS06055 9a084ae996587d1c840ccfe231b855ef 392 Gene3D G3DSA:2.40.160.60 23 392 2.3E-72 T 22-04-2016 SMGD1_RS08840 4376f73ab809955f8c3e85a4e97be621 1022 Gene3D G3DSA:1.10.3850.10 277 496 4.4E-58 T 22-04-2016 SMGD1_RS08840 4376f73ab809955f8c3e85a4e97be621 1022 Gene3D G3DSA:1.10.3850.10 802 1016 3.0E-51 T 22-04-2016 SMGD1_RS08840 4376f73ab809955f8c3e85a4e97be621 1022 PRINTS PR00702 Acriflavin resistance protein family signature 331 354 3.4E-35 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMGD1_RS08840 4376f73ab809955f8c3e85a4e97be621 1022 PRINTS PR00702 Acriflavin resistance protein family signature 611 625 3.4E-35 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMGD1_RS08840 4376f73ab809955f8c3e85a4e97be621 1022 PRINTS PR00702 Acriflavin resistance protein family signature 540 557 3.4E-35 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMGD1_RS08840 4376f73ab809955f8c3e85a4e97be621 1022 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 3.4E-35 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMGD1_RS08840 4376f73ab809955f8c3e85a4e97be621 1022 PRINTS PR00702 Acriflavin resistance protein family signature 468 491 3.4E-35 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMGD1_RS08840 4376f73ab809955f8c3e85a4e97be621 1022 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 3.4E-35 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMGD1_RS08840 4376f73ab809955f8c3e85a4e97be621 1022 PRINTS PR00702 Acriflavin resistance protein family signature 386 410 3.4E-35 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMGD1_RS08840 4376f73ab809955f8c3e85a4e97be621 1022 SUPERFAMILY SSF82714 713 796 2.88E-6 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMGD1_RS08840 4376f73ab809955f8c3e85a4e97be621 1022 SUPERFAMILY SSF82693 139 182 7.59E-17 T 22-04-2016 SMGD1_RS08840 4376f73ab809955f8c3e85a4e97be621 1022 SUPERFAMILY SSF82693 268 325 7.59E-17 T 22-04-2016 SMGD1_RS08840 4376f73ab809955f8c3e85a4e97be621 1022 PANTHER PTHR32063:SF24 3 1013 0.0 T 22-04-2016 SMGD1_RS08840 4376f73ab809955f8c3e85a4e97be621 1022 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1020 4.4E-285 T 22-04-2016 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 SMGD1_RS08840 4376f73ab809955f8c3e85a4e97be621 1022 Gene3D G3DSA:3.30.2090.10 183 266 2.8E-13 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMGD1_RS08840 4376f73ab809955f8c3e85a4e97be621 1022 Gene3D G3DSA:3.30.2090.10 714 796 4.0E-4 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMGD1_RS08840 4376f73ab809955f8c3e85a4e97be621 1022 SUPERFAMILY SSF82866 291 495 1.24E-42 T 22-04-2016 SMGD1_RS08840 4376f73ab809955f8c3e85a4e97be621 1022 SUPERFAMILY SSF82693 42 127 3.4E-19 T 22-04-2016 SMGD1_RS08840 4376f73ab809955f8c3e85a4e97be621 1022 Pfam PF00873 AcrB/AcrD/AcrF family 6 1016 1.8E-274 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMGD1_RS08840 4376f73ab809955f8c3e85a4e97be621 1022 SUPERFAMILY SSF82866 794 1016 1.96E-49 T 22-04-2016 SMGD1_RS08840 4376f73ab809955f8c3e85a4e97be621 1022 PANTHER PTHR32063 3 1013 0.0 T 22-04-2016 SMGD1_RS08840 4376f73ab809955f8c3e85a4e97be621 1022 Gene3D G3DSA:3.30.70.1430 42 142 2.7E-24 T 22-04-2016 SMGD1_RS08840 4376f73ab809955f8c3e85a4e97be621 1022 SUPERFAMILY SSF82714 184 265 3.01E-12 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMGD1_RS06820 1ee6ce780cb0f91f43b5e5f73590c372 345 PANTHER PTHR22942:SF1 5 336 6.7E-189 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SMGD1_RS06820 1ee6ce780cb0f91f43b5e5f73590c372 345 ProSitePatterns PS00321 recA signature. 214 222 - T 22-04-2016 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 SMGD1_RS06820 1ee6ce780cb0f91f43b5e5f73590c372 345 Gene3D G3DSA:3.40.50.300 28 268 1.6E-80 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS06820 1ee6ce780cb0f91f43b5e5f73590c372 345 PANTHER PTHR22942 5 336 6.7E-189 T 22-04-2016 SMGD1_RS06820 1ee6ce780cb0f91f43b5e5f73590c372 345 SUPERFAMILY SSF54752 269 326 1.18E-19 T 22-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal SMGD1_RS06820 1ee6ce780cb0f91f43b5e5f73590c372 345 PRINTS PR00142 RecA protein signature 165 194 1.5E-82 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SMGD1_RS06820 1ee6ce780cb0f91f43b5e5f73590c372 345 PRINTS PR00142 RecA protein signature 93 122 1.5E-82 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SMGD1_RS06820 1ee6ce780cb0f91f43b5e5f73590c372 345 PRINTS PR00142 RecA protein signature 298 315 1.5E-82 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SMGD1_RS06820 1ee6ce780cb0f91f43b5e5f73590c372 345 PRINTS PR00142 RecA protein signature 244 273 1.5E-82 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SMGD1_RS06820 1ee6ce780cb0f91f43b5e5f73590c372 345 PRINTS PR00142 RecA protein signature 127 156 1.5E-82 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SMGD1_RS06820 1ee6ce780cb0f91f43b5e5f73590c372 345 PRINTS PR00142 RecA protein signature 211 239 1.5E-82 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SMGD1_RS06820 1ee6ce780cb0f91f43b5e5f73590c372 345 Pfam PF00154 recA bacterial DNA recombination protein 7 269 1.8E-138 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SMGD1_RS06820 1ee6ce780cb0f91f43b5e5f73590c372 345 Hamap MF_00268 Protein RecA [recA]. 5 330 50.903 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SMGD1_RS06820 1ee6ce780cb0f91f43b5e5f73590c372 345 Gene3D G3DSA:3.30.250.10 269 326 1.7E-25 T 22-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal SMGD1_RS06820 1ee6ce780cb0f91f43b5e5f73590c372 345 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 4 324 8.4E-170 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SMGD1_RS06820 1ee6ce780cb0f91f43b5e5f73590c372 345 SUPERFAMILY SSF52540 5 268 8.47E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS06820 1ee6ce780cb0f91f43b5e5f73590c372 345 SMART SM00382 57 229 2.1E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain SMGD1_RS03775 8f1a15936d22ce2248a5149af725e6ae 730 Gene3D G3DSA:1.10.8.60 336 403 2.4E-30 T 22-04-2016 SMGD1_RS03775 8f1a15936d22ce2248a5149af725e6ae 730 Gene3D G3DSA:3.40.50.300 153 333 2.0E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS03775 8f1a15936d22ce2248a5149af725e6ae 730 Pfam PF07724 AAA domain (Cdc48 subfamily) 467 625 8.8E-44 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SMGD1_RS03775 8f1a15936d22ce2248a5149af725e6ae 730 Gene3D G3DSA:3.40.50.300 421 642 5.8E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS03775 8f1a15936d22ce2248a5149af725e6ae 730 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 712 2.2E-304 T 22-04-2016 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0004176 SMGD1_RS03775 8f1a15936d22ce2248a5149af725e6ae 730 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 543 561 1.8E-36 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 SMGD1_RS03775 8f1a15936d22ce2248a5149af725e6ae 730 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 514 532 1.8E-36 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 SMGD1_RS03775 8f1a15936d22ce2248a5149af725e6ae 730 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 472 490 1.8E-36 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 SMGD1_RS03775 8f1a15936d22ce2248a5149af725e6ae 730 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 576 590 1.8E-36 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 SMGD1_RS03775 8f1a15936d22ce2248a5149af725e6ae 730 SMART SM01086 631 719 9.4E-31 T 22-04-2016 IPR019489 Clp ATPase, C-terminal SMGD1_RS03775 8f1a15936d22ce2248a5149af725e6ae 730 PANTHER PTHR11638 1 715 0.0 T 22-04-2016 SMGD1_RS03775 8f1a15936d22ce2248a5149af725e6ae 730 PANTHER PTHR11638:SF111 1 715 0.0 T 22-04-2016 SMGD1_RS03775 8f1a15936d22ce2248a5149af725e6ae 730 Gene3D G3DSA:1.10.8.60 643 722 5.4E-29 T 22-04-2016 SMGD1_RS03775 8f1a15936d22ce2248a5149af725e6ae 730 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 631 711 1.7E-24 T 22-04-2016 IPR019489 Clp ATPase, C-terminal SMGD1_RS03775 8f1a15936d22ce2248a5149af725e6ae 730 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 16 61 1.2E-6 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 SMGD1_RS03775 8f1a15936d22ce2248a5149af725e6ae 730 SUPERFAMILY SSF81923 1 139 1.7E-40 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 SMGD1_RS03775 8f1a15936d22ce2248a5149af725e6ae 730 Gene3D G3DSA:1.10.1780.10 1 139 6.3E-22 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 SMGD1_RS03775 8f1a15936d22ce2248a5149af725e6ae 730 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 499 517 - T 22-04-2016 IPR028299 ClpA/B, conserved site 2 SMGD1_RS03775 8f1a15936d22ce2248a5149af725e6ae 730 SMART SM00382 190 334 1.6E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain SMGD1_RS03775 8f1a15936d22ce2248a5149af725e6ae 730 SMART SM00382 468 632 2.0E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain SMGD1_RS03775 8f1a15936d22ce2248a5149af725e6ae 730 SUPERFAMILY SSF52540 152 405 6.1E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS03775 8f1a15936d22ce2248a5149af725e6ae 730 SUPERFAMILY SSF52540 420 707 4.46E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS03775 8f1a15936d22ce2248a5149af725e6ae 730 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 195 299 2.6E-12 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SMGD1_RS00870 bf4ce1d062655692ac91d9b00456019a 218 SMART SM00947 29 199 6.2E-64 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 SMGD1_RS00870 bf4ce1d062655692ac91d9b00456019a 218 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 41 48 - T 22-04-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 SMGD1_RS00870 bf4ce1d062655692ac91d9b00456019a 218 Gene3D G3DSA:3.40.1050.10 3 208 1.1E-61 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 SMGD1_RS00870 bf4ce1d062655692ac91d9b00456019a 218 PANTHER PTHR11002 3 214 3.1E-63 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 SMGD1_RS00870 bf4ce1d062655692ac91d9b00456019a 218 SUPERFAMILY SSF53056 3 210 7.33E-60 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 SMGD1_RS00870 bf4ce1d062655692ac91d9b00456019a 218 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 86 106 - T 22-04-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 SMGD1_RS00870 bf4ce1d062655692ac91d9b00456019a 218 Pfam PF00484 Carbonic anhydrase 36 194 2.2E-47 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 SMGD1_RS03695 7bb5cef6f4c0c76ff97f8c4c7ec5e84e 364 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 223 232 - T 22-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 SMGD1_RS03695 7bb5cef6f4c0c76ff97f8c4c7ec5e84e 364 Gene3D G3DSA:3.40.640.10 46 266 3.7E-55 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SMGD1_RS03695 7bb5cef6f4c0c76ff97f8c4c7ec5e84e 364 SUPERFAMILY SSF53383 3 358 6.69E-63 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SMGD1_RS03695 7bb5cef6f4c0c76ff97f8c4c7ec5e84e 364 PANTHER PTHR11751 17 358 4.4E-103 T 22-04-2016 SMGD1_RS03695 7bb5cef6f4c0c76ff97f8c4c7ec5e84e 364 Pfam PF00155 Aminotransferase class I and II 32 356 5.0E-42 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SMGD1_RS03695 7bb5cef6f4c0c76ff97f8c4c7ec5e84e 364 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 5 362 2.5E-100 T 22-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 SMGD1_RS03695 7bb5cef6f4c0c76ff97f8c4c7ec5e84e 364 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 2 364 53.175 T 22-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 SMGD1_RS03695 7bb5cef6f4c0c76ff97f8c4c7ec5e84e 364 PANTHER PTHR11751:SF414 17 358 4.4E-103 T 22-04-2016 SMGD1_RS03695 7bb5cef6f4c0c76ff97f8c4c7ec5e84e 364 Gene3D G3DSA:3.90.1150.10 267 363 1.2E-13 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SMGD1_RS11080 6bf91bf7f771d472e695974970107464 446 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 39 446 3.4E-117 T 22-04-2016 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 SMGD1_RS11080 6bf91bf7f771d472e695974970107464 446 PANTHER PTHR30386 2 126 1.1E-119 T 22-04-2016 SMGD1_RS11080 6bf91bf7f771d472e695974970107464 446 Pfam PF13437 HlyD family secretion protein 298 403 5.5E-17 T 22-04-2016 SMGD1_RS11080 6bf91bf7f771d472e695974970107464 446 PANTHER PTHR30386:SF4 157 446 1.1E-119 T 22-04-2016 SMGD1_RS11080 6bf91bf7f771d472e695974970107464 446 PANTHER PTHR30386:SF4 2 126 1.1E-119 T 22-04-2016 SMGD1_RS11080 6bf91bf7f771d472e695974970107464 446 PANTHER PTHR30386 157 446 1.1E-119 T 22-04-2016 SMGD1_RS11080 6bf91bf7f771d472e695974970107464 446 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 410 425 7.3E-43 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 SMGD1_RS11080 6bf91bf7f771d472e695974970107464 446 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 310 331 7.3E-43 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 SMGD1_RS11080 6bf91bf7f771d472e695974970107464 446 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 343 367 7.3E-43 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 SMGD1_RS11080 6bf91bf7f771d472e695974970107464 446 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 367 390 7.3E-43 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 SMGD1_RS11080 6bf91bf7f771d472e695974970107464 446 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 83 103 7.3E-43 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 SMGD1_RS11080 6bf91bf7f771d472e695974970107464 446 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 425 445 7.3E-43 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 SMGD1_RS11080 6bf91bf7f771d472e695974970107464 446 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 41 64 7.3E-43 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 SMGD1_RS11080 6bf91bf7f771d472e695974970107464 446 ProSitePatterns PS00543 HlyD family secretion proteins signature. 410 432 - T 22-04-2016 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 SMGD1_RS11080 6bf91bf7f771d472e695974970107464 446 Pfam PF02321 Outer membrane efflux protein 145 242 3.3E-5 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SMGD1_RS11080 6bf91bf7f771d472e695974970107464 446 Gene3D G3DSA:1.20.1600.10 145 244 3.5E-5 T 22-04-2016 SMGD1_RS11080 6bf91bf7f771d472e695974970107464 446 Gene3D G3DSA:2.40.50.100 295 330 2.8E-14 T 22-04-2016 SMGD1_RS11080 6bf91bf7f771d472e695974970107464 446 Gene3D G3DSA:2.40.50.100 75 105 2.8E-14 T 22-04-2016 SMGD1_RS06205 221839abfd0a615e56812bd5fcbb8618 308 Pfam PF00849 RNA pseudouridylate synthase 79 227 9.7E-31 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMGD1_RS06205 221839abfd0a615e56812bd5fcbb8618 308 PANTHER PTHR11079 77 306 4.7E-50 T 22-04-2016 SMGD1_RS06205 221839abfd0a615e56812bd5fcbb8618 308 SUPERFAMILY SSF55120 69 279 5.76E-50 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMGD1_RS06205 221839abfd0a615e56812bd5fcbb8618 308 PANTHER PTHR11079:SF84 77 306 4.7E-50 T 22-04-2016 SMGD1_RS06205 221839abfd0a615e56812bd5fcbb8618 308 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 116 130 - T 22-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMGD1_RS11055 dec2b7d9f17e66b4958fba260bee3796 214 Gene3D G3DSA:3.40.50.1110 2 209 4.8E-36 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain SMGD1_RS11055 dec2b7d9f17e66b4958fba260bee3796 214 SUPERFAMILY SSF52266 2 209 1.38E-35 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain SMGD1_RS11055 dec2b7d9f17e66b4958fba260bee3796 214 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 11 200 1.2E-20 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain SMGD1_RS11055 dec2b7d9f17e66b4958fba260bee3796 214 PANTHER PTHR30383 6 213 8.0E-20 T 22-04-2016 SMGD1_RS07255 620eb463d8c4770efa2294adf9364abf 369 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 207 366 4.8E-49 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS07255 620eb463d8c4770efa2294adf9364abf 369 SMART SM00267 200 368 1.4E-56 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS07255 620eb463d8c4770efa2294adf9364abf 369 Gene3D G3DSA:3.30.70.270 213 367 9.3E-50 T 22-04-2016 SMGD1_RS07255 620eb463d8c4770efa2294adf9364abf 369 PANTHER PTHR10799:SF750 244 367 8.0E-23 T 22-04-2016 SMGD1_RS07255 620eb463d8c4770efa2294adf9364abf 369 PANTHER PTHR10799:SF750 38 179 8.0E-23 T 22-04-2016 SMGD1_RS07255 620eb463d8c4770efa2294adf9364abf 369 Pfam PF00990 Diguanylate cyclase, GGDEF domain 211 364 1.1E-45 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS07255 620eb463d8c4770efa2294adf9364abf 369 SUPERFAMILY SSF55073 216 367 8.63E-45 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS07255 620eb463d8c4770efa2294adf9364abf 369 PANTHER PTHR10799 244 367 8.0E-23 T 22-04-2016 SMGD1_RS07255 620eb463d8c4770efa2294adf9364abf 369 PANTHER PTHR10799 38 179 8.0E-23 T 22-04-2016 SMGD1_RS04640 7e1a2c2019c0058586cce6ee256be4d2 408 Pfam PF01553 Acyltransferase 233 359 7.7E-18 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 SMGD1_RS04640 7e1a2c2019c0058586cce6ee256be4d2 408 PANTHER PTHR10434 214 408 1.8E-36 T 22-04-2016 SMGD1_RS04640 7e1a2c2019c0058586cce6ee256be4d2 408 SUPERFAMILY SSF47336 114 186 4.32E-8 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain SMGD1_RS04640 7e1a2c2019c0058586cce6ee256be4d2 408 SUPERFAMILY SSF69593 211 407 5.75E-31 T 22-04-2016 SMGD1_RS04640 7e1a2c2019c0058586cce6ee256be4d2 408 SMART SM00563 246 362 9.7E-21 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 SMGD1_RS04640 7e1a2c2019c0058586cce6ee256be4d2 408 Gene3D G3DSA:1.10.1200.10 103 188 7.8E-13 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain SMGD1_RS04640 7e1a2c2019c0058586cce6ee256be4d2 408 Gene3D G3DSA:3.40.1130.10 232 394 3.7E-18 T 22-04-2016 SMGD1_RS11555 14682625d3d1c8a67ebae8df6cb1e9de 180 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 5 173 1.8E-73 T 22-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 SMGD1_RS11555 14682625d3d1c8a67ebae8df6cb1e9de 180 Pfam PF00227 Proteasome subunit 4 172 1.2E-21 T 22-04-2016 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: REACT_11045|Reactome: REACT_13|Reactome: REACT_13635|Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_383|Reactome: REACT_578|Reactome: REACT_6185|Reactome: REACT_6850 SMGD1_RS11555 14682625d3d1c8a67ebae8df6cb1e9de 180 SUPERFAMILY SSF56235 2 176 3.26E-50 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SMGD1_RS11555 14682625d3d1c8a67ebae8df6cb1e9de 180 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 4 176 38.163 T 22-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 SMGD1_RS11555 14682625d3d1c8a67ebae8df6cb1e9de 180 PANTHER PTHR32194 4 171 2.5E-84 T 22-04-2016 SMGD1_RS11555 14682625d3d1c8a67ebae8df6cb1e9de 180 Gene3D G3DSA:3.60.20.10 5 177 2.2E-73 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SMGD1_RS12915 9e7c86d466707a6f5ea8fe0030c8e820 461 SUPERFAMILY SSF51971 140 393 1.29E-61 T 22-04-2016 SMGD1_RS12915 9e7c86d466707a6f5ea8fe0030c8e820 461 SUPERFAMILY SSF46548 5 152 1.88E-33 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 SMGD1_RS12915 9e7c86d466707a6f5ea8fe0030c8e820 461 PANTHER PTHR11938 22 459 1.3E-152 T 22-04-2016 SMGD1_RS12915 9e7c86d466707a6f5ea8fe0030c8e820 461 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 20 127 1.8E-32 T 22-04-2016 IPR028261 Dihydroprymidine dehydrogenase domain II SMGD1_RS12915 9e7c86d466707a6f5ea8fe0030c8e820 461 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 4 457 3.3E-166 T 22-04-2016 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 SMGD1_RS12915 9e7c86d466707a6f5ea8fe0030c8e820 461 PRINTS PR00419 Adrenodoxin reductase family signature 316 329 5.29E-30 T 22-04-2016 SMGD1_RS12915 9e7c86d466707a6f5ea8fe0030c8e820 461 PRINTS PR00419 Adrenodoxin reductase family signature 166 179 5.29E-30 T 22-04-2016 SMGD1_RS12915 9e7c86d466707a6f5ea8fe0030c8e820 461 PRINTS PR00419 Adrenodoxin reductase family signature 143 165 5.29E-30 T 22-04-2016 SMGD1_RS12915 9e7c86d466707a6f5ea8fe0030c8e820 461 PRINTS PR00419 Adrenodoxin reductase family signature 208 218 5.29E-30 T 22-04-2016 SMGD1_RS12915 9e7c86d466707a6f5ea8fe0030c8e820 461 PRINTS PR00419 Adrenodoxin reductase family signature 282 296 5.29E-30 T 22-04-2016 SMGD1_RS12915 9e7c86d466707a6f5ea8fe0030c8e820 461 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 143 445 6.1E-30 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS12915 9e7c86d466707a6f5ea8fe0030c8e820 461 Gene3D G3DSA:3.40.50.720 145 231 6.6E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS12915 9e7c86d466707a6f5ea8fe0030c8e820 461 Gene3D G3DSA:3.40.50.720 397 459 6.6E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS12915 9e7c86d466707a6f5ea8fe0030c8e820 461 PANTHER PTHR11938:SF93 22 459 1.3E-152 T 22-04-2016 SMGD1_RS12915 9e7c86d466707a6f5ea8fe0030c8e820 461 Gene3D G3DSA:1.10.1060.10 2 144 2.5E-38 T 22-04-2016 SMGD1_RS12915 9e7c86d466707a6f5ea8fe0030c8e820 461 Gene3D G3DSA:3.50.50.60 232 393 2.7E-41 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS00120 799946d893bc0daacd3b922e773a02fd 188 TIGRFAM TIGR00038 efp: translation elongation factor P 6 187 3.9E-68 T 22-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 SMGD1_RS00120 799946d893bc0daacd3b922e773a02fd 188 SUPERFAMILY SSF50104 2 66 8.02E-19 T 22-04-2016 IPR008991 Translation protein SH3-like domain SMGD1_RS00120 799946d893bc0daacd3b922e773a02fd 188 Hamap MF_00141 Elongation factor P [efp]. 3 187 44.999 T 22-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 SMGD1_RS00120 799946d893bc0daacd3b922e773a02fd 188 Gene3D G3DSA:2.40.50.140 131 187 1.2E-22 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMGD1_RS00120 799946d893bc0daacd3b922e773a02fd 188 Pfam PF09285 Elongation factor P, C-terminal 132 186 1.2E-20 T 22-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 SMGD1_RS00120 799946d893bc0daacd3b922e773a02fd 188 SUPERFAMILY SSF50249 67 129 1.59E-16 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMGD1_RS00120 799946d893bc0daacd3b922e773a02fd 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 70 123 1.7E-19 T 22-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 SMGD1_RS00120 799946d893bc0daacd3b922e773a02fd 188 ProSitePatterns PS01275 Elongation factor P signature. 152 171 - T 22-04-2016 IPR013852 Translation elongation factor P/YeiP, conserved site UniPathway: UPA00345 SMGD1_RS00120 799946d893bc0daacd3b922e773a02fd 188 SMART SM00841 131 186 2.4E-27 T 22-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 SMGD1_RS00120 799946d893bc0daacd3b922e773a02fd 188 SUPERFAMILY SSF50249 131 187 2.74E-15 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMGD1_RS00120 799946d893bc0daacd3b922e773a02fd 188 SMART SM01185 69 123 2.3E-21 T 22-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 SMGD1_RS00120 799946d893bc0daacd3b922e773a02fd 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 6 62 3.2E-21 T 22-04-2016 IPR013185 Translation elongation factor, KOW-like UniPathway: UPA00345 SMGD1_RS00120 799946d893bc0daacd3b922e773a02fd 188 PIRSF PIRSF005901 2 188 1.4E-56 T 22-04-2016 IPR020599 Translation elongation factor P/YeiP UniPathway: UPA00345 SMGD1_RS00120 799946d893bc0daacd3b922e773a02fd 188 Gene3D G3DSA:2.30.30.30 2 64 1.4E-24 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 SMGD1_RS00120 799946d893bc0daacd3b922e773a02fd 188 Gene3D G3DSA:2.40.50.140 67 128 2.3E-22 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMGD1_RS00120 799946d893bc0daacd3b922e773a02fd 188 PANTHER PTHR30053 1 188 4.1E-67 T 22-04-2016 SMGD1_RS08540 8e06a025f93b055a0225b0b0bf264d92 350 SUPERFAMILY SSF54713 56 141 8.01E-16 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 SMGD1_RS08540 8e06a025f93b055a0225b0b0bf264d92 350 Gene3D G3DSA:3.30.479.20 149 192 7.8E-22 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 SMGD1_RS08540 8e06a025f93b055a0225b0b0bf264d92 350 Gene3D G3DSA:3.30.479.20 289 331 7.8E-22 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 SMGD1_RS08540 8e06a025f93b055a0225b0b0bf264d92 350 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 223 1.5E-62 T 22-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 SMGD1_RS08540 8e06a025f93b055a0225b0b0bf264d92 350 SUPERFAMILY SSF46934 4 55 3.78E-16 T 22-04-2016 IPR009060 UBA-like GO:0005515 SMGD1_RS08540 8e06a025f93b055a0225b0b0bf264d92 350 SUPERFAMILY SSF54713 234 349 8.83E-26 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 SMGD1_RS08540 8e06a025f93b055a0225b0b0bf264d92 350 PANTHER PTHR11741 255 350 3.9E-98 T 22-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 SMGD1_RS08540 8e06a025f93b055a0225b0b0bf264d92 350 PANTHER PTHR11741 1 216 3.9E-98 T 22-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 SMGD1_RS08540 8e06a025f93b055a0225b0b0bf264d92 350 Pfam PF00889 Elongation factor TS 73 332 1.2E-61 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 SMGD1_RS08540 8e06a025f93b055a0225b0b0bf264d92 350 Hamap MF_00050 Elongation factor Ts [tsf]. 1 350 57.493 T 22-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 SMGD1_RS08540 8e06a025f93b055a0225b0b0bf264d92 350 SUPERFAMILY SSF54713 149 220 1.11E-11 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 SMGD1_RS08540 8e06a025f93b055a0225b0b0bf264d92 350 Gene3D G3DSA:1.10.286.20 241 282 1.2E-6 T 22-04-2016 SMGD1_RS08540 8e06a025f93b055a0225b0b0bf264d92 350 Gene3D G3DSA:1.10.8.10 2 55 4.0E-23 T 22-04-2016 SMGD1_RS08540 8e06a025f93b055a0225b0b0bf264d92 350 Gene3D G3DSA:3.30.479.20 57 139 5.6E-14 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 SMGD1_RS08540 8e06a025f93b055a0225b0b0bf264d92 350 ProSitePatterns PS01127 Elongation factor Ts signature 2. 77 87 - T 22-04-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 SMGD1_RS01950 c9b30fbb9072811d8abedb9947f8eb13 422 Gene3D G3DSA:3.30.450.20 143 262 1.4E-6 T 22-04-2016 SMGD1_RS01950 c9b30fbb9072811d8abedb9947f8eb13 422 Gene3D G3DSA:3.40.50.2300 13 138 1.1E-30 T 22-04-2016 SMGD1_RS01950 c9b30fbb9072811d8abedb9947f8eb13 422 Pfam PF00072 Response regulator receiver domain 16 121 1.0E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS01950 c9b30fbb9072811d8abedb9947f8eb13 422 SMART SM00448 14 125 5.1E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS01950 c9b30fbb9072811d8abedb9947f8eb13 422 SUPERFAMILY SSF52172 13 166 7.68E-33 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS01950 c9b30fbb9072811d8abedb9947f8eb13 422 Pfam PF13188 PAS domain 153 201 2.3E-6 T 22-04-2016 IPR000014 PAS domain SMGD1_RS01950 c9b30fbb9072811d8abedb9947f8eb13 422 PANTHER PTHR26402 14 143 2.4E-25 T 22-04-2016 SMGD1_RS01950 c9b30fbb9072811d8abedb9947f8eb13 422 PANTHER PTHR26402 298 318 2.4E-25 T 22-04-2016 SMGD1_RS03465 f35a7e754fae20dcaa3b945040391106 596 Gene3D G3DSA:3.30.70.240 401 487 1.5E-18 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain SMGD1_RS03465 f35a7e754fae20dcaa3b945040391106 596 Gene3D G3DSA:3.30.70.870 292 369 1.6E-25 T 22-04-2016 SMGD1_RS03465 f35a7e754fae20dcaa3b945040391106 596 PANTHER PTHR23115 397 596 7.9E-252 T 22-04-2016 SMGD1_RS03465 f35a7e754fae20dcaa3b945040391106 596 PANTHER PTHR23115 2 373 7.9E-252 T 22-04-2016 SMGD1_RS03465 f35a7e754fae20dcaa3b945040391106 596 Gene3D G3DSA:2.40.30.10 192 289 7.7E-25 T 22-04-2016 SMGD1_RS03465 f35a7e754fae20dcaa3b945040391106 596 PRINTS PR00315 GTP-binding elongation factor signature 49 57 2.2E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMGD1_RS03465 f35a7e754fae20dcaa3b945040391106 596 PRINTS PR00315 GTP-binding elongation factor signature 73 83 2.2E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMGD1_RS03465 f35a7e754fae20dcaa3b945040391106 596 PRINTS PR00315 GTP-binding elongation factor signature 6 19 2.2E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMGD1_RS03465 f35a7e754fae20dcaa3b945040391106 596 PRINTS PR00315 GTP-binding elongation factor signature 125 134 2.2E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMGD1_RS03465 f35a7e754fae20dcaa3b945040391106 596 PRINTS PR00315 GTP-binding elongation factor signature 89 100 2.2E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMGD1_RS03465 f35a7e754fae20dcaa3b945040391106 596 TIGRFAM TIGR01393 lepA: elongation factor 4 2 596 1.2E-286 T 22-04-2016 IPR006297 Elongation factor 4 GO:0005525 SMGD1_RS03465 f35a7e754fae20dcaa3b945040391106 596 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 174 1.4E-19 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SMGD1_RS03465 f35a7e754fae20dcaa3b945040391106 596 SUPERFAMILY SSF54980 291 370 3.38E-19 T 22-04-2016 IPR009022 Elongation factor G, III-V domain SMGD1_RS03465 f35a7e754fae20dcaa3b945040391106 596 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site SMGD1_RS03465 f35a7e754fae20dcaa3b945040391106 596 Pfam PF03144 Elongation factor Tu domain 2 204 275 1.1E-9 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 SMGD1_RS03465 f35a7e754fae20dcaa3b945040391106 596 Pfam PF06421 GTP-binding protein LepA C-terminus 489 594 2.3E-45 T 22-04-2016 IPR013842 GTP-binding protein LepA, C-terminal SMGD1_RS03465 f35a7e754fae20dcaa3b945040391106 596 SUPERFAMILY SSF54980 399 494 1.34E-21 T 22-04-2016 IPR009022 Elongation factor G, III-V domain SMGD1_RS03465 f35a7e754fae20dcaa3b945040391106 596 Pfam PF00679 Elongation factor G C-terminus 399 485 7.3E-22 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain SMGD1_RS03465 f35a7e754fae20dcaa3b945040391106 596 SUPERFAMILY SSF50447 164 285 9.94E-30 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain SMGD1_RS03465 f35a7e754fae20dcaa3b945040391106 596 Hamap MF_00071 Elongation factor 4 [lepA]. 1 596 276.477 T 22-04-2016 IPR006297 Elongation factor 4 GO:0005525 SMGD1_RS03465 f35a7e754fae20dcaa3b945040391106 596 PANTHER PTHR23115:SF175 397 596 7.9E-252 T 22-04-2016 SMGD1_RS03465 f35a7e754fae20dcaa3b945040391106 596 PANTHER PTHR23115:SF175 2 373 7.9E-252 T 22-04-2016 SMGD1_RS03465 f35a7e754fae20dcaa3b945040391106 596 Pfam PF00009 Elongation factor Tu GTP binding domain 2 181 4.3E-53 T 22-04-2016 SMGD1_RS03465 f35a7e754fae20dcaa3b945040391106 596 SUPERFAMILY SSF52540 2 185 1.49E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS03465 f35a7e754fae20dcaa3b945040391106 596 Gene3D G3DSA:3.40.50.300 2 191 1.1E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS02460 46314f29883112d1aeed8e10ea7e8434 486 SUPERFAMILY SSF50447 244 344 1.67E-18 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain SMGD1_RS02460 46314f29883112d1aeed8e10ea7e8434 486 SUPERFAMILY SSF52540 18 234 6.49E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS02460 46314f29883112d1aeed8e10ea7e8434 486 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 16 477 47.776 T 22-04-2016 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 SMGD1_RS02460 46314f29883112d1aeed8e10ea7e8434 486 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 80 95 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site SMGD1_RS02460 46314f29883112d1aeed8e10ea7e8434 486 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 25 448 1.1E-181 T 22-04-2016 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 SMGD1_RS02460 46314f29883112d1aeed8e10ea7e8434 486 PRINTS PR00315 GTP-binding elongation factor signature 26 39 5.9E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMGD1_RS02460 46314f29883112d1aeed8e10ea7e8434 486 PRINTS PR00315 GTP-binding elongation factor signature 107 117 5.9E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMGD1_RS02460 46314f29883112d1aeed8e10ea7e8434 486 PRINTS PR00315 GTP-binding elongation factor signature 123 134 5.9E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMGD1_RS02460 46314f29883112d1aeed8e10ea7e8434 486 PRINTS PR00315 GTP-binding elongation factor signature 87 95 5.9E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMGD1_RS02460 46314f29883112d1aeed8e10ea7e8434 486 PRINTS PR00315 GTP-binding elongation factor signature 160 169 5.9E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMGD1_RS02460 46314f29883112d1aeed8e10ea7e8434 486 Gene3D G3DSA:3.40.50.300 6 234 1.4E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS02460 46314f29883112d1aeed8e10ea7e8434 486 PANTHER PTHR23115 73 360 4.2E-69 T 22-04-2016 SMGD1_RS02460 46314f29883112d1aeed8e10ea7e8434 486 PANTHER PTHR23115 11 51 4.2E-69 T 22-04-2016 SMGD1_RS02460 46314f29883112d1aeed8e10ea7e8434 486 SUPERFAMILY SSF50465 346 449 3.5E-30 T 22-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal SMGD1_RS02460 46314f29883112d1aeed8e10ea7e8434 486 Pfam PF00009 Elongation factor Tu GTP binding domain 22 226 3.7E-46 T 22-04-2016 SMGD1_RS02460 46314f29883112d1aeed8e10ea7e8434 486 Gene3D G3DSA:2.40.30.10 245 365 4.7E-15 T 22-04-2016 SMGD1_RS02460 46314f29883112d1aeed8e10ea7e8434 486 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 30 214 1.1E-14 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SMGD1_RS02460 46314f29883112d1aeed8e10ea7e8434 486 Gene3D G3DSA:2.40.30.10 366 449 1.4E-5 T 22-04-2016 SMGD1_RS03215 763a63be66d0c3b1f421559f01903f78 699 PANTHER PTHR30218 1 696 5.3E-303 T 22-04-2016 SMGD1_RS03215 763a63be66d0c3b1f421559f01903f78 699 Gene3D G3DSA:3.30.870.10 497 675 7.4E-66 T 22-04-2016 SMGD1_RS03215 763a63be66d0c3b1f421559f01903f78 699 SUPERFAMILY SSF140356 6 107 4.19E-34 T 22-04-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 SMGD1_RS03215 763a63be66d0c3b1f421559f01903f78 699 Pfam PF13089 Polyphosphate kinase N-terminal domain 10 113 6.0E-33 T 22-04-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 SMGD1_RS03215 763a63be66d0c3b1f421559f01903f78 699 PANTHER PTHR30218:SF0 1 696 5.3E-303 T 22-04-2016 SMGD1_RS03215 763a63be66d0c3b1f421559f01903f78 699 Pfam PF13090 Polyphosphate kinase C-terminal domain 327 667 5.3E-148 T 22-04-2016 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 SMGD1_RS03215 763a63be66d0c3b1f421559f01903f78 699 Pfam PF02503 Polyphosphate kinase middle domain 124 317 9.1E-62 T 22-04-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 SMGD1_RS03215 763a63be66d0c3b1f421559f01903f78 699 SUPERFAMILY SSF56024 498 675 4.93E-61 T 22-04-2016 SMGD1_RS03215 763a63be66d0c3b1f421559f01903f78 699 SUPERFAMILY SSF56024 312 493 1.0E-54 T 22-04-2016 SMGD1_RS03215 763a63be66d0c3b1f421559f01903f78 699 Hamap MF_00347 Polyphosphate kinase [ppk]. 7 674 34.549 T 22-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 SMGD1_RS03215 763a63be66d0c3b1f421559f01903f78 699 Gene3D G3DSA:3.30.870.10 312 496 4.6E-73 T 22-04-2016 SMGD1_RS03215 763a63be66d0c3b1f421559f01903f78 699 Gene3D G3DSA:3.30.1840.10 111 297 2.5E-62 T 22-04-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 SMGD1_RS03215 763a63be66d0c3b1f421559f01903f78 699 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 10 667 4.3E-251 T 22-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 SMGD1_RS03215 763a63be66d0c3b1f421559f01903f78 699 PIRSF PIRSF015589 1 688 4.6E-269 T 22-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 SMGD1_RS03215 763a63be66d0c3b1f421559f01903f78 699 SUPERFAMILY SSF143724 112 302 4.12E-59 T 22-04-2016 SMGD1_RS13925 d411e1e2402b96b2a869f3c999555064 272 Pfam PF00586 AIR synthase related protein, N-terminal domain 18 122 6.1E-15 T 22-04-2016 IPR016188 PurM-like, N-terminal domain SMGD1_RS13925 d411e1e2402b96b2a869f3c999555064 272 Gene3D G3DSA:3.30.1330.10 10 126 7.7E-28 T 22-04-2016 IPR016188 PurM-like, N-terminal domain SMGD1_RS13925 d411e1e2402b96b2a869f3c999555064 272 PANTHER PTHR30270 15 255 1.9E-43 T 22-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 SMGD1_RS13925 d411e1e2402b96b2a869f3c999555064 272 SUPERFAMILY SSF56042 127 243 2.3E-11 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SMGD1_RS13925 d411e1e2402b96b2a869f3c999555064 272 Gene3D G3DSA:3.90.650.10 130 239 1.3E-15 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SMGD1_RS13925 d411e1e2402b96b2a869f3c999555064 272 SUPERFAMILY SSF55326 7 122 5.06E-23 T 22-04-2016 SMGD1_RS13925 d411e1e2402b96b2a869f3c999555064 272 PANTHER PTHR30270:SF0 15 255 1.9E-43 T 22-04-2016 SMGD1_RS13845 1009770ec0814823401f03f6c9d29027 470 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 34 119 4.8E-8 T 22-04-2016 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 SMGD1_RS13845 1009770ec0814823401f03f6c9d29027 470 Gene3D G3DSA:3.40.220.10 16 147 4.7E-15 T 22-04-2016 SMGD1_RS13845 1009770ec0814823401f03f6c9d29027 470 PANTHER PTHR11963 62 470 4.5E-156 T 22-04-2016 SMGD1_RS13845 1009770ec0814823401f03f6c9d29027 470 Gene3D G3DSA:3.40.630.10 148 469 5.6E-119 T 22-04-2016 SMGD1_RS13845 1009770ec0814823401f03f6c9d29027 470 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 155 463 1.9E-104 T 22-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 SMGD1_RS13845 1009770ec0814823401f03f6c9d29027 470 SUPERFAMILY SSF52949 16 132 1.77E-12 T 22-04-2016 SMGD1_RS13845 1009770ec0814823401f03f6c9d29027 470 SUPERFAMILY SSF53187 149 469 6.28E-104 T 22-04-2016 SMGD1_RS13845 1009770ec0814823401f03f6c9d29027 470 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 315 322 - T 22-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 SMGD1_RS13845 1009770ec0814823401f03f6c9d29027 470 PRINTS PR00481 Cytosol aminopeptidase signature 289 310 1.4E-48 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 SMGD1_RS13845 1009770ec0814823401f03f6c9d29027 470 PRINTS PR00481 Cytosol aminopeptidase signature 230 247 1.4E-48 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 SMGD1_RS13845 1009770ec0814823401f03f6c9d29027 470 PRINTS PR00481 Cytosol aminopeptidase signature 252 273 1.4E-48 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 SMGD1_RS13845 1009770ec0814823401f03f6c9d29027 470 PRINTS PR00481 Cytosol aminopeptidase signature 340 355 1.4E-48 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 SMGD1_RS13845 1009770ec0814823401f03f6c9d29027 470 PRINTS PR00481 Cytosol aminopeptidase signature 311 331 1.4E-48 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 SMGD1_RS13845 1009770ec0814823401f03f6c9d29027 470 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 1 470 30.577 T 22-04-2016 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 SMGD1_RS13845 1009770ec0814823401f03f6c9d29027 470 PANTHER PTHR11963:SF13 62 470 4.5E-156 T 22-04-2016 SMGD1_RS00800 13cac6832bbc83863766876e6c5f9acb 268 Hamap MF_00193 NH(3)-dependent NAD(+) synthetase [nadE]. 2 249 30.954 T 22-04-2016 IPR022926 NH(3)-dependent NAD(+) synthetase GO:0008795|GO:0009435 KEGG: 00760+6.3.1.5|UniPathway: UPA00253 SMGD1_RS00800 13cac6832bbc83863766876e6c5f9acb 268 Pfam PF02540 NAD synthase 10 246 8.9E-79 T 22-04-2016 IPR022310 NAD/GMP synthase SMGD1_RS00800 13cac6832bbc83863766876e6c5f9acb 268 TIGRFAM TIGR00552 nadE: NAD+ synthetase 6 249 1.3E-75 T 22-04-2016 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|UniPathway: UPA00253 SMGD1_RS00800 13cac6832bbc83863766876e6c5f9acb 268 SUPERFAMILY SSF52402 5 248 4.19E-71 T 22-04-2016 SMGD1_RS00800 13cac6832bbc83863766876e6c5f9acb 268 Gene3D G3DSA:3.40.50.620 5 249 1.2E-72 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMGD1_RS00800 13cac6832bbc83863766876e6c5f9acb 268 PANTHER PTHR23090 4 257 1.4E-76 T 22-04-2016 SMGD1_RS09495 15ceeda1da9da6cba7e948b69c20512a 629 Gene3D G3DSA:3.30.70.270 245 372 1.3E-17 T 22-04-2016 SMGD1_RS09495 15ceeda1da9da6cba7e948b69c20512a 629 SMART SM00052 382 622 5.6E-39 T 22-04-2016 IPR001633 EAL domain SMGD1_RS09495 15ceeda1da9da6cba7e948b69c20512a 629 Gene3D G3DSA:3.20.20.450 387 622 2.1E-60 T 22-04-2016 IPR001633 EAL domain SMGD1_RS09495 15ceeda1da9da6cba7e948b69c20512a 629 SMART SM00267 208 370 1.7E-9 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS09495 15ceeda1da9da6cba7e948b69c20512a 629 Pfam PF00990 Diguanylate cyclase, GGDEF domain 245 363 8.9E-14 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS09495 15ceeda1da9da6cba7e948b69c20512a 629 SUPERFAMILY SSF141868 389 627 1.57E-61 T 22-04-2016 IPR001633 EAL domain SMGD1_RS09495 15ceeda1da9da6cba7e948b69c20512a 629 PANTHER PTHR33121:SF10 388 621 5.5E-47 T 22-04-2016 SMGD1_RS09495 15ceeda1da9da6cba7e948b69c20512a 629 SUPERFAMILY SSF55073 224 364 3.3E-18 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS09495 15ceeda1da9da6cba7e948b69c20512a 629 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 246 364 4.8E-11 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS09495 15ceeda1da9da6cba7e948b69c20512a 629 Pfam PF00563 EAL domain 389 617 2.6E-55 T 22-04-2016 IPR001633 EAL domain SMGD1_RS09495 15ceeda1da9da6cba7e948b69c20512a 629 PANTHER PTHR33121 388 621 5.5E-47 T 22-04-2016 SMGD1_RS11595 596ef668371797b2b512d3a5f831d338 719 Pfam PF00563 EAL domain 484 713 4.4E-58 T 22-04-2016 IPR001633 EAL domain SMGD1_RS11595 596ef668371797b2b512d3a5f831d338 719 Gene3D G3DSA:3.30.70.270 315 458 6.0E-14 T 22-04-2016 SMGD1_RS11595 596ef668371797b2b512d3a5f831d338 719 SMART SM00052 477 718 1.4E-54 T 22-04-2016 IPR001633 EAL domain SMGD1_RS11595 596ef668371797b2b512d3a5f831d338 719 Pfam PF00990 Diguanylate cyclase, GGDEF domain 315 458 7.4E-12 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS11595 596ef668371797b2b512d3a5f831d338 719 PANTHER PTHR33121:SF10 425 717 1.6E-52 T 22-04-2016 SMGD1_RS11595 596ef668371797b2b512d3a5f831d338 719 PANTHER PTHR33121:SF10 322 400 1.6E-52 T 22-04-2016 SMGD1_RS11595 596ef668371797b2b512d3a5f831d338 719 Gene3D G3DSA:3.20.20.450 482 715 1.6E-65 T 22-04-2016 IPR001633 EAL domain SMGD1_RS11595 596ef668371797b2b512d3a5f831d338 719 Pfam PF14827 Double sensory domain of two-component sensor kinase 36 209 6.3E-14 T 22-04-2016 IPR029150 Double Cache domain 3 SMGD1_RS11595 596ef668371797b2b512d3a5f831d338 719 SUPERFAMILY SSF55073 319 458 1.1E-13 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS11595 596ef668371797b2b512d3a5f831d338 719 SMART SM00267 300 465 2.3E-6 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS11595 596ef668371797b2b512d3a5f831d338 719 SUPERFAMILY SSF141868 484 715 3.4E-66 T 22-04-2016 IPR001633 EAL domain SMGD1_RS11595 596ef668371797b2b512d3a5f831d338 719 PANTHER PTHR33121 425 717 1.6E-52 T 22-04-2016 SMGD1_RS11595 596ef668371797b2b512d3a5f831d338 719 PANTHER PTHR33121 322 400 1.6E-52 T 22-04-2016 SMGD1_RS00850 f9f63455a90e5c1f55298033e76e8124 297 Pfam PF00448 SRP54-type protein, GTPase domain 85 284 2.4E-74 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 SMGD1_RS00850 f9f63455a90e5c1f55298033e76e8124 297 SUPERFAMILY SSF47364 1 65 6.67E-5 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 SMGD1_RS00850 f9f63455a90e5c1f55298033e76e8124 297 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 24 285 54.467 T 22-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 SMGD1_RS00850 f9f63455a90e5c1f55298033e76e8124 297 SMART SM00962 84 285 1.9E-107 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 SMGD1_RS00850 f9f63455a90e5c1f55298033e76e8124 297 SMART SM00382 83 241 6.3E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain SMGD1_RS00850 f9f63455a90e5c1f55298033e76e8124 297 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 258 271 - T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 SMGD1_RS00850 f9f63455a90e5c1f55298033e76e8124 297 SUPERFAMILY SSF52540 83 284 1.46E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS00850 f9f63455a90e5c1f55298033e76e8124 297 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 30 284 2.7E-95 T 22-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 SMGD1_RS00850 f9f63455a90e5c1f55298033e76e8124 297 Gene3D G3DSA:1.20.120.140 31 95 4.1E-17 T 22-04-2016 SMGD1_RS00850 f9f63455a90e5c1f55298033e76e8124 297 PANTHER PTHR11564 31 284 9.3E-101 T 22-04-2016 SMGD1_RS00850 f9f63455a90e5c1f55298033e76e8124 297 PANTHER PTHR11564:SF16 31 284 9.3E-101 T 22-04-2016 SMGD1_RS00850 f9f63455a90e5c1f55298033e76e8124 297 Gene3D G3DSA:3.40.50.300 96 285 2.9E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS06685 c7886881877b4d2f35902b63c17c1176 644 PANTHER PTHR32089 202 463 4.2E-18 T 22-04-2016 SMGD1_RS06685 c7886881877b4d2f35902b63c17c1176 644 Gene3D G3DSA:3.30.450.20 93 219 6.9E-39 T 22-04-2016 SMGD1_RS06685 c7886881877b4d2f35902b63c17c1176 644 SMART SM00086 428 469 3.8E-6 T 22-04-2016 IPR001610 PAC motif SMGD1_RS06685 c7886881877b4d2f35902b63c17c1176 644 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 368 474 1.2E-19 T 22-04-2016 IPR000014 PAS domain SMGD1_RS06685 c7886881877b4d2f35902b63c17c1176 644 SUPERFAMILY SSF103190 45 219 6.91E-42 T 22-04-2016 IPR029151 Periplasmic sensor domain-like SMGD1_RS06685 c7886881877b4d2f35902b63c17c1176 644 Gene3D G3DSA:3.30.70.270 479 639 5.5E-42 T 22-04-2016 SMGD1_RS06685 c7886881877b4d2f35902b63c17c1176 644 SMART SM00267 465 642 1.9E-43 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS06685 c7886881877b4d2f35902b63c17c1176 644 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 473 639 2.2E-40 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS06685 c7886881877b4d2f35902b63c17c1176 644 Pfam PF00990 Diguanylate cyclase, GGDEF domain 478 638 4.7E-38 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS06685 c7886881877b4d2f35902b63c17c1176 644 Pfam PF13426 PAS domain 372 468 7.6E-11 T 22-04-2016 IPR000014 PAS domain SMGD1_RS06685 c7886881877b4d2f35902b63c17c1176 644 Gene3D G3DSA:3.30.450.20 369 468 4.3E-24 T 22-04-2016 SMGD1_RS06685 c7886881877b4d2f35902b63c17c1176 644 SUPERFAMILY SSF55785 369 466 8.2E-26 T 22-04-2016 IPR000014 PAS domain SMGD1_RS06685 c7886881877b4d2f35902b63c17c1176 644 PANTHER PTHR32089:SF52 202 463 4.2E-18 T 22-04-2016 SMGD1_RS06685 c7886881877b4d2f35902b63c17c1176 644 SUPERFAMILY SSF55073 481 640 7.77E-38 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS07430 5c679f35eb5cb09ca2f0010c5a922351 203 Gene3D G3DSA:1.25.40.10 23 184 7.6E-37 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS07430 5c679f35eb5cb09ca2f0010c5a922351 203 SMART SM00671 49 84 1.8E-6 T 22-04-2016 IPR006597 Sel1-like repeat SMGD1_RS07430 5c679f35eb5cb09ca2f0010c5a922351 203 SMART SM00671 85 120 5.5E-8 T 22-04-2016 IPR006597 Sel1-like repeat SMGD1_RS07430 5c679f35eb5cb09ca2f0010c5a922351 203 SMART SM00671 153 188 11.0 T 22-04-2016 IPR006597 Sel1-like repeat SMGD1_RS07430 5c679f35eb5cb09ca2f0010c5a922351 203 SMART SM00671 121 152 0.003 T 22-04-2016 IPR006597 Sel1-like repeat SMGD1_RS07430 5c679f35eb5cb09ca2f0010c5a922351 203 Pfam PF08238 Sel1 repeat 122 152 0.23 T 22-04-2016 IPR006597 Sel1-like repeat SMGD1_RS07430 5c679f35eb5cb09ca2f0010c5a922351 203 Pfam PF08238 Sel1 repeat 50 83 9.6E-8 T 22-04-2016 IPR006597 Sel1-like repeat SMGD1_RS07430 5c679f35eb5cb09ca2f0010c5a922351 203 Pfam PF08238 Sel1 repeat 85 119 8.7E-8 T 22-04-2016 IPR006597 Sel1-like repeat SMGD1_RS07430 5c679f35eb5cb09ca2f0010c5a922351 203 Pfam PF08238 Sel1 repeat 153 182 4.1E-4 T 22-04-2016 IPR006597 Sel1-like repeat SMGD1_RS07430 5c679f35eb5cb09ca2f0010c5a922351 203 SUPERFAMILY SSF81901 22 184 1.66E-32 T 22-04-2016 SMGD1_RS07430 5c679f35eb5cb09ca2f0010c5a922351 203 PANTHER PTHR11102 17 179 1.5E-33 T 22-04-2016 SMGD1_RS01595 5dd5704cb9bfdb0e5969ab153e8ed4d9 366 Pfam PF00561 alpha/beta hydrolase fold 41 352 1.3E-30 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SMGD1_RS01595 5dd5704cb9bfdb0e5969ab153e8ed4d9 366 SUPERFAMILY SSF53474 8 365 1.84E-95 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SMGD1_RS01595 5dd5704cb9bfdb0e5969ab153e8ed4d9 366 PANTHER PTHR32268:SF11 9 366 2.1E-144 T 22-04-2016 SMGD1_RS01595 5dd5704cb9bfdb0e5969ab153e8ed4d9 366 PANTHER PTHR32268 9 366 2.1E-144 T 22-04-2016 SMGD1_RS01595 5dd5704cb9bfdb0e5969ab153e8ed4d9 366 Hamap MF_00296 Homoserine O-acetyltransferase [metX]. 1 366 40.779 T 22-04-2016 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344|UniPathway: UPA00051 SMGD1_RS01595 5dd5704cb9bfdb0e5969ab153e8ed4d9 366 Gene3D G3DSA:3.40.50.1820 231 365 1.6E-37 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SMGD1_RS01595 5dd5704cb9bfdb0e5969ab153e8ed4d9 366 Gene3D G3DSA:3.40.50.1820 23 197 1.6E-37 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SMGD1_RS01595 5dd5704cb9bfdb0e5969ab153e8ed4d9 366 PIRSF PIRSF000443 2 366 1.0E-135 T 22-04-2016 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344|UniPathway: UPA00051 SMGD1_RS01595 5dd5704cb9bfdb0e5969ab153e8ed4d9 366 TIGRFAM TIGR01392 homoserO_Ac_trn: homoserine O-acetyltransferase 12 364 1.5E-126 T 22-04-2016 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344|UniPathway: UPA00051 SMGD1_RS12990 70943d3bf654c9745dd73274f91a8e61 943 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 7 920 0.0 T 22-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 SMGD1_RS12990 70943d3bf654c9745dd73274f91a8e61 943 SUPERFAMILY SSF52540 616 904 3.25E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS12990 70943d3bf654c9745dd73274f91a8e61 943 SUPERFAMILY SSF52540 7 207 2.41E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS12990 70943d3bf654c9745dd73274f91a8e61 943 SUPERFAMILY SSF52540 441 568 2.41E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS12990 70943d3bf654c9745dd73274f91a8e61 943 Pfam PF00005 ABC transporter 620 855 1.3E-7 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMGD1_RS12990 70943d3bf654c9745dd73274f91a8e61 943 Gene3D G3DSA:3.40.50.300 4 54 6.8E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS12990 70943d3bf654c9745dd73274f91a8e61 943 Gene3D G3DSA:3.40.50.300 476 591 6.8E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS12990 70943d3bf654c9745dd73274f91a8e61 943 Gene3D G3DSA:3.40.50.300 602 662 1.3E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS12990 70943d3bf654c9745dd73274f91a8e61 943 Gene3D G3DSA:3.40.50.300 816 936 1.3E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS12990 70943d3bf654c9745dd73274f91a8e61 943 Gene3D G3DSA:1.20.1580.10 94 132 1.3E-48 T 22-04-2016 SMGD1_RS12990 70943d3bf654c9745dd73274f91a8e61 943 Gene3D G3DSA:1.20.1580.10 258 291 1.3E-48 T 22-04-2016 SMGD1_RS12990 70943d3bf654c9745dd73274f91a8e61 943 Gene3D G3DSA:1.20.1580.10 402 475 1.3E-48 T 22-04-2016 SMGD1_RS12990 70943d3bf654c9745dd73274f91a8e61 943 Gene3D G3DSA:1.20.1580.10 689 815 8.4E-53 T 22-04-2016 SMGD1_RS12990 70943d3bf654c9745dd73274f91a8e61 943 PANTHER PTHR32282:SF2 3 938 0.0 T 22-04-2016 SMGD1_RS12990 70943d3bf654c9745dd73274f91a8e61 943 PANTHER PTHR32282 3 938 0.0 T 22-04-2016 SMGD1_RS12990 70943d3bf654c9745dd73274f91a8e61 943 Gene3D G3DSA:1.10.8.280 294 401 9.5E-17 T 22-04-2016 SMGD1_RS12990 70943d3bf654c9745dd73274f91a8e61 943 Gene3D G3DSA:3.30.1490.20 203 245 3.5E-14 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SMGD1_RS12990 70943d3bf654c9745dd73274f91a8e61 943 Gene3D G3DSA:3.30.1490.20 134 156 3.5E-14 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SMGD1_RS12990 70943d3bf654c9745dd73274f91a8e61 943 ProSitePatterns PS00211 ABC transporters family signature. 486 500 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMGD1_RS12990 70943d3bf654c9745dd73274f91a8e61 943 ProSitePatterns PS00211 ABC transporters family signature. 825 839 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMGD1_RS14170 08b69439c5bd7e6b302fb3a59cc68268 270 Gene3D G3DSA:3.30.420.10 102 256 9.5E-35 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMGD1_RS14170 08b69439c5bd7e6b302fb3a59cc68268 270 Pfam PF13276 HTH-like domain 23 78 4.0E-16 T 22-04-2016 IPR025948 HTH-like domain SMGD1_RS14170 08b69439c5bd7e6b302fb3a59cc68268 270 PANTHER PTHR32552 1 270 2.0E-64 T 22-04-2016 SMGD1_RS14170 08b69439c5bd7e6b302fb3a59cc68268 270 Pfam PF00665 Integrase core domain 104 217 1.2E-32 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SMGD1_RS14170 08b69439c5bd7e6b302fb3a59cc68268 270 SUPERFAMILY SSF53098 96 261 6.07E-42 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMGD1_RS13295 46d2b466db0d8ad4d672c069b258cf50 645 Gene3D G3DSA:3.40.50.1220 510 635 6.3E-42 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain SMGD1_RS13295 46d2b466db0d8ad4d672c069b258cf50 645 SMART SM00893 23 220 1.2E-24 T 22-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 SMGD1_RS13295 46d2b466db0d8ad4d672c069b258cf50 645 SMART SM00893 300 499 1.4E-23 T 22-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 SMGD1_RS13295 46d2b466db0d8ad4d672c069b258cf50 645 Pfam PF01012 Electron transfer flavoprotein domain 301 485 2.6E-32 T 22-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 SMGD1_RS13295 46d2b466db0d8ad4d672c069b258cf50 645 Pfam PF01012 Electron transfer flavoprotein domain 26 214 5.0E-24 T 22-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 SMGD1_RS13295 46d2b466db0d8ad4d672c069b258cf50 645 SUPERFAMILY SSF52402 4 262 3.7E-44 T 22-04-2016 SMGD1_RS13295 46d2b466db0d8ad4d672c069b258cf50 645 SUPERFAMILY SSF52402 299 488 8.37E-36 T 22-04-2016 SMGD1_RS13295 46d2b466db0d8ad4d672c069b258cf50 645 PANTHER PTHR21294 1 273 9.4E-63 T 22-04-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 SMGD1_RS13295 46d2b466db0d8ad4d672c069b258cf50 645 Gene3D G3DSA:3.40.50.620 299 502 4.9E-48 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMGD1_RS13295 46d2b466db0d8ad4d672c069b258cf50 645 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 511 597 4.3E-29 T 22-04-2016 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal SMGD1_RS13295 46d2b466db0d8ad4d672c069b258cf50 645 Gene3D G3DSA:3.40.50.620 4 265 3.2E-63 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMGD1_RS13295 46d2b466db0d8ad4d672c069b258cf50 645 SUPERFAMILY SSF52467 511 633 1.04E-33 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain SMGD1_RS13295 46d2b466db0d8ad4d672c069b258cf50 645 PANTHER PTHR21294:SF0 1 273 9.4E-63 T 22-04-2016 SMGD1_RS04970 b40e1129126e9fca004cd143ee96100d 405 Gene3D G3DSA:2.40.340.10 329 403 4.1E-5 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 SMGD1_RS04970 b40e1129126e9fca004cd143ee96100d 405 Pfam PF03453 MoeA N-terminal region (domain I and II) 17 163 6.7E-28 T 22-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 SMGD1_RS04970 b40e1129126e9fca004cd143ee96100d 405 SMART SM00852 178 317 3.6E-36 T 22-04-2016 IPR001453 MoaB/Mog domain SMGD1_RS04970 b40e1129126e9fca004cd143ee96100d 405 SUPERFAMILY SSF53218 175 321 6.41E-35 T 22-04-2016 IPR001453 MoaB/Mog domain SMGD1_RS04970 b40e1129126e9fca004cd143ee96100d 405 Pfam PF00994 Probable molybdopterin binding domain 178 309 9.7E-22 T 22-04-2016 IPR001453 MoaB/Mog domain SMGD1_RS04970 b40e1129126e9fca004cd143ee96100d 405 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 174 304 6.1E-28 T 22-04-2016 IPR001453 MoaB/Mog domain SMGD1_RS04970 b40e1129126e9fca004cd143ee96100d 405 Gene3D G3DSA:3.40.980.10 160 328 1.0E-48 T 22-04-2016 IPR001453 MoaB/Mog domain SMGD1_RS04970 b40e1129126e9fca004cd143ee96100d 405 Gene3D G3DSA:3.90.105.10 129 159 3.5E-13 T 22-04-2016 SMGD1_RS04970 b40e1129126e9fca004cd143ee96100d 405 SUPERFAMILY SSF63882 19 171 6.8E-39 T 22-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 SMGD1_RS04970 b40e1129126e9fca004cd143ee96100d 405 Gene3D G3DSA:2.170.190.11 47 128 5.3E-20 T 22-04-2016 SMGD1_RS04970 b40e1129126e9fca004cd143ee96100d 405 PANTHER PTHR10192 21 405 3.3E-102 T 22-04-2016 SMGD1_RS04970 b40e1129126e9fca004cd143ee96100d 405 SUPERFAMILY SSF63867 326 404 5.89E-9 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 SMGD1_RS06135 e0658f4712809eb8d011069c4e6564fb 529 SUPERFAMILY SSF64182 31 409 3.79E-109 T 22-04-2016 SMGD1_RS06135 e0658f4712809eb8d011069c4e6564fb 529 PANTHER PTHR30255:SF2 27 525 2.0E-167 T 22-04-2016 SMGD1_RS06135 e0658f4712809eb8d011069c4e6564fb 529 Pfam PF01368 DHH family 57 161 9.8E-11 T 22-04-2016 IPR001667 DDH domain SMGD1_RS06135 e0658f4712809eb8d011069c4e6564fb 529 PANTHER PTHR30255 27 525 2.0E-167 T 22-04-2016 SMGD1_RS06135 e0658f4712809eb8d011069c4e6564fb 529 Pfam PF02272 DHHA1 domain 342 404 4.4E-14 T 22-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 SMGD1_RS06135 e0658f4712809eb8d011069c4e6564fb 529 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 26 527 7.2E-156 T 22-04-2016 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 SMGD1_RS09020 e702377bb99f3cb00e0682e238ab0647 383 Pfam PF03486 HI0933-like protein 4 377 4.2E-94 T 22-04-2016 SMGD1_RS09020 e702377bb99f3cb00e0682e238ab0647 383 PANTHER PTHR10617 315 379 9.6E-63 T 22-04-2016 SMGD1_RS09020 e702377bb99f3cb00e0682e238ab0647 383 PANTHER PTHR10617 1 278 9.6E-63 T 22-04-2016 SMGD1_RS09020 e702377bb99f3cb00e0682e238ab0647 383 SUPERFAMILY SSF160996 185 325 9.02E-27 T 22-04-2016 SMGD1_RS09020 e702377bb99f3cb00e0682e238ab0647 383 Gene3D G3DSA:3.50.50.60 324 381 4.4E-34 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS09020 e702377bb99f3cb00e0682e238ab0647 383 Gene3D G3DSA:3.50.50.60 3 182 4.4E-34 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS09020 e702377bb99f3cb00e0682e238ab0647 383 Gene3D G3DSA:2.40.30.10 185 264 5.2E-21 T 22-04-2016 SMGD1_RS09020 e702377bb99f3cb00e0682e238ab0647 383 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 6.0E-5 T 22-04-2016 SMGD1_RS09020 e702377bb99f3cb00e0682e238ab0647 383 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 332 354 6.0E-5 T 22-04-2016 SMGD1_RS09020 e702377bb99f3cb00e0682e238ab0647 383 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 6.0E-5 T 22-04-2016 SMGD1_RS09020 e702377bb99f3cb00e0682e238ab0647 383 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 6 377 1.8E-97 T 22-04-2016 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like SMGD1_RS09020 e702377bb99f3cb00e0682e238ab0647 383 SUPERFAMILY SSF51905 1 184 7.5E-37 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS09020 e702377bb99f3cb00e0682e238ab0647 383 SUPERFAMILY SSF51905 322 381 7.5E-37 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS09020 e702377bb99f3cb00e0682e238ab0647 383 PANTHER PTHR10617:SF103 315 379 9.6E-63 T 22-04-2016 SMGD1_RS09020 e702377bb99f3cb00e0682e238ab0647 383 PANTHER PTHR10617:SF103 1 278 9.6E-63 T 22-04-2016 SMGD1_RS10360 8e0229774000504777bf6f3edd4cc3e0 531 Gene3D G3DSA:3.20.20.450 294 523 5.0E-58 T 22-04-2016 IPR001633 EAL domain SMGD1_RS10360 8e0229774000504777bf6f3edd4cc3e0 531 Gene3D G3DSA:3.30.70.270 133 282 2.3E-16 T 22-04-2016 SMGD1_RS10360 8e0229774000504777bf6f3edd4cc3e0 531 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 132 224 2.3E-10 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS10360 8e0229774000504777bf6f3edd4cc3e0 531 Pfam PF00563 EAL domain 295 520 2.8E-57 T 22-04-2016 IPR001633 EAL domain SMGD1_RS10360 8e0229774000504777bf6f3edd4cc3e0 531 SUPERFAMILY SSF55073 136 273 1.1E-15 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS10360 8e0229774000504777bf6f3edd4cc3e0 531 PANTHER PTHR33121:SF10 238 520 1.8E-44 T 22-04-2016 SMGD1_RS10360 8e0229774000504777bf6f3edd4cc3e0 531 PANTHER PTHR33121:SF10 108 151 1.8E-44 T 22-04-2016 SMGD1_RS10360 8e0229774000504777bf6f3edd4cc3e0 531 Pfam PF13426 PAS domain 19 120 3.6E-14 T 22-04-2016 IPR000014 PAS domain SMGD1_RS10360 8e0229774000504777bf6f3edd4cc3e0 531 Pfam PF00990 Diguanylate cyclase, GGDEF domain 133 229 3.8E-15 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS10360 8e0229774000504777bf6f3edd4cc3e0 531 SMART SM00052 286 526 2.0E-43 T 22-04-2016 IPR001633 EAL domain SMGD1_RS10360 8e0229774000504777bf6f3edd4cc3e0 531 SMART SM00267 121 276 1.8E-7 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS10360 8e0229774000504777bf6f3edd4cc3e0 531 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 8 127 6.7E-15 T 22-04-2016 IPR000014 PAS domain SMGD1_RS10360 8e0229774000504777bf6f3edd4cc3e0 531 Gene3D G3DSA:3.30.450.20 20 120 5.8E-25 T 22-04-2016 SMGD1_RS10360 8e0229774000504777bf6f3edd4cc3e0 531 PANTHER PTHR33121 108 151 1.8E-44 T 22-04-2016 SMGD1_RS10360 8e0229774000504777bf6f3edd4cc3e0 531 SUPERFAMILY SSF141868 294 523 5.1E-58 T 22-04-2016 IPR001633 EAL domain SMGD1_RS10360 8e0229774000504777bf6f3edd4cc3e0 531 SMART SM00086 79 121 6.8E-8 T 22-04-2016 IPR001610 PAC motif SMGD1_RS10360 8e0229774000504777bf6f3edd4cc3e0 531 SUPERFAMILY SSF55785 20 118 5.41E-26 T 22-04-2016 IPR000014 PAS domain SMGD1_RS10360 8e0229774000504777bf6f3edd4cc3e0 531 PANTHER PTHR33121 238 520 1.8E-44 T 22-04-2016 SMGD1_RS04480 ed4436fba67e3689c8b24abdfeecc01f 175 Pfam PF00467 KOW motif 124 147 7.5E-5 T 22-04-2016 IPR005824 KOW SMGD1_RS04480 ed4436fba67e3689c8b24abdfeecc01f 175 Pfam PF02357 Transcription termination factor nusG 4 105 1.8E-17 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 SMGD1_RS04480 ed4436fba67e3689c8b24abdfeecc01f 175 SMART SM00738 2 109 5.7E-26 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 SMGD1_RS04480 ed4436fba67e3689c8b24abdfeecc01f 175 PRINTS PR00338 Transcription termination factor NUSG signature 132 147 8.5E-14 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 SMGD1_RS04480 ed4436fba67e3689c8b24abdfeecc01f 175 PRINTS PR00338 Transcription termination factor NUSG signature 56 68 8.5E-14 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 SMGD1_RS04480 ed4436fba67e3689c8b24abdfeecc01f 175 PRINTS PR00338 Transcription termination factor NUSG signature 150 166 8.5E-14 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 SMGD1_RS04480 ed4436fba67e3689c8b24abdfeecc01f 175 ProSitePatterns PS01014 Transcription termination factor nusG signature. 157 166 - T 22-04-2016 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site SMGD1_RS04480 ed4436fba67e3689c8b24abdfeecc01f 175 SMART SM00739 120 147 2.9E-4 T 22-04-2016 IPR005824 KOW SMGD1_RS04480 ed4436fba67e3689c8b24abdfeecc01f 175 SUPERFAMILY SSF82679 3 111 2.35E-27 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 SMGD1_RS04480 ed4436fba67e3689c8b24abdfeecc01f 175 SUPERFAMILY SSF50104 118 174 1.3E-16 T 22-04-2016 IPR008991 Translation protein SH3-like domain SMGD1_RS04480 ed4436fba67e3689c8b24abdfeecc01f 175 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 2 174 20.402 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 SMGD1_RS04480 ed4436fba67e3689c8b24abdfeecc01f 175 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 5 174 5.9E-55 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 SMGD1_RS04480 ed4436fba67e3689c8b24abdfeecc01f 175 Gene3D G3DSA:2.30.30.30 114 174 6.2E-27 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 SMGD1_RS04480 ed4436fba67e3689c8b24abdfeecc01f 175 Gene3D G3DSA:3.30.70.940 3 111 1.4E-30 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 SMGD1_RS04480 ed4436fba67e3689c8b24abdfeecc01f 175 PANTHER PTHR30265 4 175 2.7E-55 T 22-04-2016 SMGD1_RS08780 b6f475799513daf532a46978327c1546 332 Gene3D G3DSA:3.40.718.10 1 327 1.7E-120 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 SMGD1_RS08780 b6f475799513daf532a46978327c1546 332 Pfam PF02504 Fatty acid synthesis protein 2 318 7.5E-110 T 22-04-2016 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 UniPathway: UPA00085 SMGD1_RS08780 b6f475799513daf532a46978327c1546 332 SUPERFAMILY SSF53659 1 328 1.4E-95 T 22-04-2016 SMGD1_RS08780 b6f475799513daf532a46978327c1546 332 PANTHER PTHR30100:SF1 1 327 2.8E-112 T 22-04-2016 SMGD1_RS08780 b6f475799513daf532a46978327c1546 332 PIRSF PIRSF002465 1 332 2.4E-115 T 22-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 SMGD1_RS08780 b6f475799513daf532a46978327c1546 332 PANTHER PTHR30100 1 327 2.8E-112 T 22-04-2016 SMGD1_RS08780 b6f475799513daf532a46978327c1546 332 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 2 329 2.5E-112 T 22-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 SMGD1_RS08780 b6f475799513daf532a46978327c1546 332 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 332 129.997 T 22-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 SMGD1_RS10530 23de4a828cd6bd5e8527a8ae4bb7cdb6 683 Gene3D G3DSA:3.30.70.270 519 680 1.7E-48 T 22-04-2016 SMGD1_RS10530 23de4a828cd6bd5e8527a8ae4bb7cdb6 683 PANTHER PTHR10799:SF774 1 17 2.8E-25 T 22-04-2016 SMGD1_RS10530 23de4a828cd6bd5e8527a8ae4bb7cdb6 683 PANTHER PTHR10799:SF774 373 672 2.8E-25 T 22-04-2016 SMGD1_RS10530 23de4a828cd6bd5e8527a8ae4bb7cdb6 683 Pfam PF08447 PAS fold 412 499 2.3E-19 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 SMGD1_RS10530 23de4a828cd6bd5e8527a8ae4bb7cdb6 683 Pfam PF08447 PAS fold 283 370 1.9E-18 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 SMGD1_RS10530 23de4a828cd6bd5e8527a8ae4bb7cdb6 683 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 513 676 2.2E-42 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS10530 23de4a828cd6bd5e8527a8ae4bb7cdb6 683 Gene3D G3DSA:3.30.450.20 379 516 3.0E-31 T 22-04-2016 SMGD1_RS10530 23de4a828cd6bd5e8527a8ae4bb7cdb6 683 SUPERFAMILY SSF52172 124 253 1.32E-33 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS10530 23de4a828cd6bd5e8527a8ae4bb7cdb6 683 SUPERFAMILY SSF55785 395 508 3.7E-19 T 22-04-2016 IPR000014 PAS domain SMGD1_RS10530 23de4a828cd6bd5e8527a8ae4bb7cdb6 683 SUPERFAMILY SSF55073 522 677 1.41E-44 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS10530 23de4a828cd6bd5e8527a8ae4bb7cdb6 683 SUPERFAMILY SSF55785 262 379 2.23E-20 T 22-04-2016 IPR000014 PAS domain SMGD1_RS10530 23de4a828cd6bd5e8527a8ae4bb7cdb6 683 SMART SM00448 2 114 1.9E-4 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS10530 23de4a828cd6bd5e8527a8ae4bb7cdb6 683 SMART SM00448 123 236 4.4E-32 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS10530 23de4a828cd6bd5e8527a8ae4bb7cdb6 683 PANTHER PTHR10799 1 17 2.8E-25 T 22-04-2016 SMGD1_RS10530 23de4a828cd6bd5e8527a8ae4bb7cdb6 683 PANTHER PTHR10799 373 672 2.8E-25 T 22-04-2016 SMGD1_RS10530 23de4a828cd6bd5e8527a8ae4bb7cdb6 683 Gene3D G3DSA:3.40.50.2300 124 250 6.0E-34 T 22-04-2016 SMGD1_RS10530 23de4a828cd6bd5e8527a8ae4bb7cdb6 683 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 389 513 4.9E-11 T 22-04-2016 IPR000014 PAS domain SMGD1_RS10530 23de4a828cd6bd5e8527a8ae4bb7cdb6 683 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 283 384 4.6E-13 T 22-04-2016 IPR000014 PAS domain SMGD1_RS10530 23de4a828cd6bd5e8527a8ae4bb7cdb6 683 SMART SM00267 506 677 1.8E-56 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS10530 23de4a828cd6bd5e8527a8ae4bb7cdb6 683 SMART SM00086 464 506 0.0021 T 22-04-2016 IPR001610 PAC motif SMGD1_RS10530 23de4a828cd6bd5e8527a8ae4bb7cdb6 683 SMART SM00086 335 377 1.8E-7 T 22-04-2016 IPR001610 PAC motif SMGD1_RS10530 23de4a828cd6bd5e8527a8ae4bb7cdb6 683 Pfam PF00990 Diguanylate cyclase, GGDEF domain 518 672 8.6E-43 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS10530 23de4a828cd6bd5e8527a8ae4bb7cdb6 683 Gene3D G3DSA:3.40.50.2300 2 118 2.2E-14 T 22-04-2016 SMGD1_RS10530 23de4a828cd6bd5e8527a8ae4bb7cdb6 683 Pfam PF00072 Response regulator receiver domain 125 236 1.4E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS10530 23de4a828cd6bd5e8527a8ae4bb7cdb6 683 Pfam PF00072 Response regulator receiver domain 4 105 3.0E-10 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS10530 23de4a828cd6bd5e8527a8ae4bb7cdb6 683 Gene3D G3DSA:3.30.450.20 262 378 7.4E-21 T 22-04-2016 SMGD1_RS10530 23de4a828cd6bd5e8527a8ae4bb7cdb6 683 SUPERFAMILY SSF52172 1 119 2.56E-16 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS10530 23de4a828cd6bd5e8527a8ae4bb7cdb6 683 SMART SM00091 389 457 4.6E-7 T 22-04-2016 IPR000014 PAS domain SMGD1_RS10530 23de4a828cd6bd5e8527a8ae4bb7cdb6 683 SMART SM00091 257 327 0.033 T 22-04-2016 IPR000014 PAS domain SMGD1_RS11735 337362bfa87d9ddbc1cd30e953cf5ed2 207 Gene3D G3DSA:1.10.760.10 124 192 8.6E-13 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS11735 337362bfa87d9ddbc1cd30e953cf5ed2 207 SUPERFAMILY SSF46626 127 192 1.16E-12 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS13275 8712055f86110276d81a667481b544f7 314 Pfam PF02618 YceG-like family 39 310 1.7E-54 T 22-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like SMGD1_RS13275 8712055f86110276d81a667481b544f7 314 PANTHER PTHR30518:SF2 5 310 1.5E-34 T 22-04-2016 SMGD1_RS13275 8712055f86110276d81a667481b544f7 314 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 129 310 1.6E-39 T 22-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like SMGD1_RS13275 8712055f86110276d81a667481b544f7 314 Gene3D G3DSA:3.30.160.60 284 310 2.2E-4 T 22-04-2016 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 SMGD1_RS13275 8712055f86110276d81a667481b544f7 314 PANTHER PTHR30518 5 310 1.5E-34 T 22-04-2016 SMGD1_RS03120 e588babf1c138fc4021942f9ce0cb006 231 Gene3D G3DSA:3.40.50.2300 8 130 1.6E-31 T 22-04-2016 SMGD1_RS03120 e588babf1c138fc4021942f9ce0cb006 231 Gene3D G3DSA:1.10.10.10 136 230 2.4E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMGD1_RS03120 e588babf1c138fc4021942f9ce0cb006 231 Pfam PF00072 Response regulator receiver domain 10 119 2.1E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS03120 e588babf1c138fc4021942f9ce0cb006 231 Pfam PF00486 Transcriptional regulatory protein, C terminal 160 229 5.3E-11 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMGD1_RS03120 e588babf1c138fc4021942f9ce0cb006 231 SMART SM00862 157 229 2.6E-9 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMGD1_RS03120 e588babf1c138fc4021942f9ce0cb006 231 PANTHER PTHR26402 8 231 2.9E-37 T 22-04-2016 SMGD1_RS03120 e588babf1c138fc4021942f9ce0cb006 231 SMART SM00448 8 119 2.8E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS03120 e588babf1c138fc4021942f9ce0cb006 231 SUPERFAMILY SSF52172 8 171 6.69E-32 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS03120 e588babf1c138fc4021942f9ce0cb006 231 SUPERFAMILY SSF46894 141 229 2.21E-11 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SMGD1_RS09650 a715048d3a253e6d5ca3676ff24c46a4 202 SUPERFAMILY SSF53335 13 197 3.24E-31 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS09650 a715048d3a253e6d5ca3676ff24c46a4 202 Pfam PF03602 Conserved hypothetical protein 95 13 197 4.6E-37 T 22-04-2016 SMGD1_RS09650 a715048d3a253e6d5ca3676ff24c46a4 202 PIRSF PIRSF004553 11 201 7.7E-38 T 22-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SMGD1_RS09650 a715048d3a253e6d5ca3676ff24c46a4 202 Gene3D G3DSA:3.40.50.150 6 199 4.4E-48 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS09650 a715048d3a253e6d5ca3676ff24c46a4 202 PANTHER PTHR18895:SF60 12 202 2.5E-15 T 22-04-2016 SMGD1_RS09650 a715048d3a253e6d5ca3676ff24c46a4 202 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 7 198 2.0E-39 T 22-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SMGD1_RS09650 a715048d3a253e6d5ca3676ff24c46a4 202 PANTHER PTHR18895 12 202 2.5E-15 T 22-04-2016 SMGD1_RS11340 3c136f489c5c5fa7548f53bb3bd887a3 85 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 82 7.3E-41 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS11340 3c136f489c5c5fa7548f53bb3bd887a3 85 Gene3D G3DSA:2.40.50.100 20 84 2.5E-34 T 22-04-2016 SMGD1_RS11340 3c136f489c5c5fa7548f53bb3bd887a3 85 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 70 7.0E-16 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS11340 3c136f489c5c5fa7548f53bb3bd887a3 85 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 84 28.273 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS11340 3c136f489c5c5fa7548f53bb3bd887a3 85 PRINTS PR00063 Ribosomal protein L27 signature 54 78 4.4E-40 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS11340 3c136f489c5c5fa7548f53bb3bd887a3 85 PRINTS PR00063 Ribosomal protein L27 signature 4 28 4.4E-40 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS11340 3c136f489c5c5fa7548f53bb3bd887a3 85 PRINTS PR00063 Ribosomal protein L27 signature 29 53 4.4E-40 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS11340 3c136f489c5c5fa7548f53bb3bd887a3 85 SUPERFAMILY SSF110324 2 83 7.18E-36 T 22-04-2016 SMGD1_RS11340 3c136f489c5c5fa7548f53bb3bd887a3 85 Pfam PF01016 Ribosomal L27 protein 2 81 1.2E-39 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS11340 3c136f489c5c5fa7548f53bb3bd887a3 85 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 22-04-2016 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS11340 3c136f489c5c5fa7548f53bb3bd887a3 85 PANTHER PTHR15893 1 85 2.7E-50 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS06895 20d4def69ebb651cf98e3248c660338c 504 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 134 150 - T 22-04-2016 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 SMGD1_RS06895 20d4def69ebb651cf98e3248c660338c 504 SUPERFAMILY SSF48557 16 502 7.69E-147 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 SMGD1_RS06895 20d4def69ebb651cf98e3248c660338c 504 PANTHER PTHR10362 14 501 2.4E-134 T 22-04-2016 SMGD1_RS06895 20d4def69ebb651cf98e3248c660338c 504 Gene3D G3DSA:1.10.275.10 17 192 2.1E-54 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal SMGD1_RS06895 20d4def69ebb651cf98e3248c660338c 504 Pfam PF00221 Aromatic amino acid lyase 17 475 1.3E-139 T 22-04-2016 IPR001106 Aromatic amino acid lyase SMGD1_RS06895 20d4def69ebb651cf98e3248c660338c 504 PANTHER PTHR10362:SF7 14 501 2.4E-134 T 22-04-2016 SMGD1_RS06895 20d4def69ebb651cf98e3248c660338c 504 Gene3D G3DSA:1.20.200.10 193 501 9.9E-86 T 22-04-2016 SMGD1_RS05980 4ebe09e9c81442d87751bae304070acc 433 SUPERFAMILY SSF102735 1 128 2.88E-24 T 22-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 SMGD1_RS05980 4ebe09e9c81442d87751bae304070acc 433 PIRSF PIRSF003095 1 433 6.0E-104 T 22-04-2016 IPR005215 Trigger factor GO:0015031 SMGD1_RS05980 4ebe09e9c81442d87751bae304070acc 433 PANTHER PTHR30560 1 432 4.2E-70 T 22-04-2016 SMGD1_RS05980 4ebe09e9c81442d87751bae304070acc 433 Gene3D G3DSA:1.10.3120.10 219 402 1.5E-42 T 22-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 SMGD1_RS05980 4ebe09e9c81442d87751bae304070acc 433 PANTHER PTHR30560:SF3 1 432 4.2E-70 T 22-04-2016 SMGD1_RS05980 4ebe09e9c81442d87751bae304070acc 433 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 268 426 4.6E-28 T 22-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 SMGD1_RS05980 4ebe09e9c81442d87751bae304070acc 433 SUPERFAMILY SSF54534 107 245 5.89E-28 T 22-04-2016 SMGD1_RS05980 4ebe09e9c81442d87751bae304070acc 433 TIGRFAM TIGR00115 tig: trigger factor 12 426 1.3E-112 T 22-04-2016 IPR005215 Trigger factor GO:0015031 SMGD1_RS05980 4ebe09e9c81442d87751bae304070acc 433 SUPERFAMILY SSF109998 252 428 2.09E-31 T 22-04-2016 IPR027304 Trigger factor/SurA domain SMGD1_RS05980 4ebe09e9c81442d87751bae304070acc 433 Gene3D G3DSA:3.30.70.1050 1 120 4.3E-24 T 22-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 SMGD1_RS05980 4ebe09e9c81442d87751bae304070acc 433 Pfam PF05697 Bacterial trigger factor protein (TF) 1 145 3.3E-28 T 22-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 SMGD1_RS05980 4ebe09e9c81442d87751bae304070acc 433 Gene3D G3DSA:3.10.50.40 154 218 2.5E-10 T 22-04-2016 SMGD1_RS05980 4ebe09e9c81442d87751bae304070acc 433 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 160 240 3.7E-14 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 SMGD1_RS05980 4ebe09e9c81442d87751bae304070acc 433 Hamap MF_00303 Trigger factor [tig]. 1 433 19.281 T 22-04-2016 IPR005215 Trigger factor GO:0015031 SMGD1_RS04000 926b894b3c50c399368e623cb9ece16d 516 PANTHER PTHR11922:SF2 6 513 2.0E-271 T 22-04-2016 SMGD1_RS04000 926b894b3c50c399368e623cb9ece16d 516 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 3 516 53.296 T 22-04-2016 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 SMGD1_RS04000 926b894b3c50c399368e623cb9ece16d 516 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 77 93 2.4E-5 T 22-04-2016 SMGD1_RS04000 926b894b3c50c399368e623cb9ece16d 516 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 47 61 2.4E-5 T 22-04-2016 SMGD1_RS04000 926b894b3c50c399368e623cb9ece16d 516 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 6 20 2.4E-5 T 22-04-2016 SMGD1_RS04000 926b894b3c50c399368e623cb9ece16d 516 Gene3D G3DSA:3.40.50.620 200 390 2.0E-57 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMGD1_RS04000 926b894b3c50c399368e623cb9ece16d 516 Pfam PF02540 NAD synthase 207 246 2.4E-6 T 22-04-2016 IPR022310 NAD/GMP synthase SMGD1_RS04000 926b894b3c50c399368e623cb9ece16d 516 SUPERFAMILY SSF52402 189 408 3.09E-56 T 22-04-2016 SMGD1_RS04000 926b894b3c50c399368e623cb9ece16d 516 PANTHER PTHR11922 6 513 2.0E-271 T 22-04-2016 SMGD1_RS04000 926b894b3c50c399368e623cb9ece16d 516 SUPERFAMILY SSF52317 6 229 2.21E-55 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SMGD1_RS04000 926b894b3c50c399368e623cb9ece16d 516 SUPERFAMILY SSF54810 396 516 2.88E-48 T 22-04-2016 SMGD1_RS04000 926b894b3c50c399368e623cb9ece16d 516 Pfam PF00958 GMP synthase C terminal domain 424 515 6.9E-43 T 22-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 SMGD1_RS04000 926b894b3c50c399368e623cb9ece16d 516 Gene3D G3DSA:3.30.300.10 392 516 3.2E-49 T 22-04-2016 SMGD1_RS04000 926b894b3c50c399368e623cb9ece16d 516 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 205 516 1.6E-146 T 22-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 SMGD1_RS04000 926b894b3c50c399368e623cb9ece16d 516 PRINTS PR00096 Glutamine amidotransferase superfamily signature 169 182 1.5E-6 T 22-04-2016 SMGD1_RS04000 926b894b3c50c399368e623cb9ece16d 516 PRINTS PR00096 Glutamine amidotransferase superfamily signature 77 88 1.5E-6 T 22-04-2016 SMGD1_RS04000 926b894b3c50c399368e623cb9ece16d 516 PRINTS PR00096 Glutamine amidotransferase superfamily signature 50 59 1.5E-6 T 22-04-2016 SMGD1_RS04000 926b894b3c50c399368e623cb9ece16d 516 Gene3D G3DSA:3.40.50.880 4 196 8.1E-65 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SMGD1_RS04000 926b894b3c50c399368e623cb9ece16d 516 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 6 196 1.1E-73 T 22-04-2016 IPR004739 GMP synthase, N-terminal GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 SMGD1_RS04000 926b894b3c50c399368e623cb9ece16d 516 Pfam PF00117 Glutamine amidotransferase class-I 8 191 2.7E-40 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 SMGD1_RS04000 926b894b3c50c399368e623cb9ece16d 516 PRINTS PR00097 Anthranilate synthase component II signature 77 88 7.0E-5 T 22-04-2016 SMGD1_RS04000 926b894b3c50c399368e623cb9ece16d 516 PRINTS PR00097 Anthranilate synthase component II signature 50 59 7.0E-5 T 22-04-2016 SMGD1_RS04000 926b894b3c50c399368e623cb9ece16d 516 PRINTS PR00097 Anthranilate synthase component II signature 169 182 7.0E-5 T 22-04-2016 SMGD1_RS05060 bf2eee7e0cca0c9035d42c746631aea5 259 Pfam PF05690 Thiazole biosynthesis protein ThiG 6 252 1.5E-102 T 22-04-2016 SMGD1_RS05060 bf2eee7e0cca0c9035d42c746631aea5 259 PANTHER PTHR34266:SF2 1 259 1.2E-135 T 22-04-2016 SMGD1_RS05060 bf2eee7e0cca0c9035d42c746631aea5 259 PANTHER PTHR34266 1 259 1.2E-135 T 22-04-2016 SMGD1_RS05060 bf2eee7e0cca0c9035d42c746631aea5 259 Gene3D G3DSA:3.20.20.70 4 255 1.8E-51 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMGD1_RS05060 bf2eee7e0cca0c9035d42c746631aea5 259 SUPERFAMILY SSF110399 4 244 3.4E-82 T 22-04-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 SMGD1_RS05060 bf2eee7e0cca0c9035d42c746631aea5 259 Hamap MF_00443 Thiazole synthase [thiG]. 4 258 41.573 T 22-04-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 SMGD1_RS02490 b8c6d8a6f08fae2c1559a93ed19ab133 310 Gene3D G3DSA:3.90.25.10 196 306 2.2E-5 T 22-04-2016 SMGD1_RS02490 b8c6d8a6f08fae2c1559a93ed19ab133 310 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 240 1.2E-34 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 SMGD1_RS02490 b8c6d8a6f08fae2c1559a93ed19ab133 310 PANTHER PTHR10366 3 303 3.5E-52 T 22-04-2016 SMGD1_RS02490 b8c6d8a6f08fae2c1559a93ed19ab133 310 SUPERFAMILY SSF51735 2 306 1.69E-55 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS02490 b8c6d8a6f08fae2c1559a93ed19ab133 310 Gene3D G3DSA:3.40.50.720 2 195 2.1E-40 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS04880 1de875ece5bbc78b0340752548a597af 181 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 178 36.745 T 22-04-2016 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS04880 1de875ece5bbc78b0340752548a597af 181 PANTHER PTHR11994:SF4 13 178 1.1E-66 T 22-04-2016 SMGD1_RS04880 1de875ece5bbc78b0340752548a597af 181 PIRSF PIRSF002161 1 181 2.4E-57 T 22-04-2016 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 SMGD1_RS04880 1de875ece5bbc78b0340752548a597af 181 SUPERFAMILY SSF55282 12 177 6.83E-63 T 22-04-2016 IPR022803 Ribosomal protein L5 domain SMGD1_RS04880 1de875ece5bbc78b0340752548a597af 181 PANTHER PTHR11994 13 178 1.1E-66 T 22-04-2016 SMGD1_RS04880 1de875ece5bbc78b0340752548a597af 181 Pfam PF00281 Ribosomal protein L5 23 79 2.9E-17 T 22-04-2016 IPR031310 Ribosomal protein L5, N-terminal SMGD1_RS04880 1de875ece5bbc78b0340752548a597af 181 Gene3D G3DSA:3.30.1440.10 2 177 2.5E-62 T 22-04-2016 IPR022803 Ribosomal protein L5 domain SMGD1_RS04880 1de875ece5bbc78b0340752548a597af 181 Pfam PF00673 ribosomal L5P family C-terminus 83 176 5.2E-38 T 22-04-2016 IPR031309 Ribosomal protein L5, C-terminal SMGD1_RS02730 204ea9b38e7a05d00c2902f5ce974b1d 204 Pfam PF02613 Nitrate reductase delta subunit 54 167 6.6E-17 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone SMGD1_RS02730 204ea9b38e7a05d00c2902f5ce974b1d 204 SUPERFAMILY SSF89155 4 199 5.62E-38 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone SMGD1_RS02730 204ea9b38e7a05d00c2902f5ce974b1d 204 Gene3D G3DSA:1.10.3480.10 4 200 1.5E-47 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone SMGD1_RS03135 fc2a94fec9e7c9c81b13dbf2871873d7 270 Pfam PF13277 YmdB-like protein 5 246 2.0E-87 T 22-04-2016 IPR005235 Metallophosphoesterase, YmdB-like SMGD1_RS03135 fc2a94fec9e7c9c81b13dbf2871873d7 270 PIRSF PIRSF004789 1 257 2.4E-86 T 22-04-2016 IPR005235 Metallophosphoesterase, YmdB-like SMGD1_RS03135 fc2a94fec9e7c9c81b13dbf2871873d7 270 PANTHER PTHR36303:SF1 2 263 4.4E-90 T 22-04-2016 SMGD1_RS03135 fc2a94fec9e7c9c81b13dbf2871873d7 270 SUPERFAMILY SSF56300 1 242 1.96E-65 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SMGD1_RS03135 fc2a94fec9e7c9c81b13dbf2871873d7 270 Gene3D G3DSA:3.60.21.30 1 261 8.4E-93 T 22-04-2016 SMGD1_RS03135 fc2a94fec9e7c9c81b13dbf2871873d7 270 PANTHER PTHR36303 2 263 4.4E-90 T 22-04-2016 SMGD1_RS13250 e9e5a92423d8bb05fd57ad62539ed7c6 861 PANTHER PTHR11670:SF39 294 842 3.5E-292 T 22-04-2016 SMGD1_RS13250 e9e5a92423d8bb05fd57ad62539ed7c6 861 Gene3D G3DSA:3.40.1060.10 510 671 3.1E-81 T 22-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMGD1_RS13250 e9e5a92423d8bb05fd57ad62539ed7c6 861 PIRSF PIRSF036687 1 849 0.0 T 22-04-2016 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 SMGD1_RS13250 e9e5a92423d8bb05fd57ad62539ed7c6 861 ProSitePatterns PS00450 Aconitase family signature 1. 691 708 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMGD1_RS13250 e9e5a92423d8bb05fd57ad62539ed7c6 861 PANTHER PTHR11670 294 842 3.5E-292 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMGD1_RS13250 e9e5a92423d8bb05fd57ad62539ed7c6 861 Gene3D G3DSA:3.20.19.10 163 349 1.9E-83 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel SMGD1_RS13250 e9e5a92423d8bb05fd57ad62539ed7c6 861 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 3 843 0.0 T 22-04-2016 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 SMGD1_RS13250 e9e5a92423d8bb05fd57ad62539ed7c6 861 SUPERFAMILY SSF53732 368 843 3.27E-139 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMGD1_RS13250 e9e5a92423d8bb05fd57ad62539ed7c6 861 SUPERFAMILY SSF52016 163 359 1.49E-61 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel SMGD1_RS13250 e9e5a92423d8bb05fd57ad62539ed7c6 861 Gene3D G3DSA:3.30.499.10 672 848 1.7E-46 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMGD1_RS13250 e9e5a92423d8bb05fd57ad62539ed7c6 861 Pfam PF06434 Aconitate hydratase 2 N-terminus 169 371 1.1E-94 T 22-04-2016 IPR015929 Aconitase B, N-terminal GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 SMGD1_RS13250 e9e5a92423d8bb05fd57ad62539ed7c6 861 Pfam PF11791 Aconitate B N-terminal domain 6 157 4.0E-58 T 22-04-2016 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 SMGD1_RS13250 e9e5a92423d8bb05fd57ad62539ed7c6 861 SUPERFAMILY SSF74778 3 161 7.72E-58 T 22-04-2016 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 SMGD1_RS13250 e9e5a92423d8bb05fd57ad62539ed7c6 861 Pfam PF00330 Aconitase family (aconitate hydratase) 460 804 7.6E-34 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMGD1_RS13250 e9e5a92423d8bb05fd57ad62539ed7c6 861 Gene3D G3DSA:3.30.499.10 392 509 5.8E-56 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMGD1_RS04645 a191a32a1f6289e04059fae4a52ec033 254 Gene3D G3DSA:3.20.20.190 9 253 3.4E-61 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 SMGD1_RS04645 a191a32a1f6289e04059fae4a52ec033 254 SUPERFAMILY SSF51695 11 253 1.99E-61 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 SMGD1_RS04645 a191a32a1f6289e04059fae4a52ec033 254 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 16 253 2.0E-40 T 22-04-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 SMGD1_RS04645 a191a32a1f6289e04059fae4a52ec033 254 PANTHER PTHR23344 12 252 2.3E-53 T 22-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 SMGD1_RS10925 3580ce5f4cc66afa5df094623d6ee176 336 SUPERFAMILY SSF53927 6 173 2.13E-32 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 SMGD1_RS10925 3580ce5f4cc66afa5df094623d6ee176 336 Gene3D G3DSA:3.40.140.10 6 174 2.2E-24 T 22-04-2016 SMGD1_RS10925 3580ce5f4cc66afa5df094623d6ee176 336 PANTHER PTHR11079 90 230 7.5E-27 T 22-04-2016 SMGD1_RS10925 3580ce5f4cc66afa5df094623d6ee176 336 PANTHER PTHR11079 4 67 7.5E-27 T 22-04-2016 SMGD1_RS10925 3580ce5f4cc66afa5df094623d6ee176 336 Gene3D G3DSA:3.40.430.10 175 263 2.4E-16 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain SMGD1_RS10925 3580ce5f4cc66afa5df094623d6ee176 336 PANTHER PTHR11079:SF10 90 230 7.5E-27 T 22-04-2016 SMGD1_RS10925 3580ce5f4cc66afa5df094623d6ee176 336 PANTHER PTHR11079:SF10 4 67 7.5E-27 T 22-04-2016 SMGD1_RS10925 3580ce5f4cc66afa5df094623d6ee176 336 SUPERFAMILY SSF53597 175 332 6.95E-22 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain SMGD1_RS10925 3580ce5f4cc66afa5df094623d6ee176 336 Pfam PF01872 RibD C-terminal domain 182 306 5.4E-8 T 22-04-2016 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 SMGD1_RS10925 3580ce5f4cc66afa5df094623d6ee176 336 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 10 253 1.8E-66 T 22-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 SMGD1_RS10925 3580ce5f4cc66afa5df094623d6ee176 336 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 6 129 2.2E-16 T 22-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 SMGD1_RS03155 7acad6b6c6d645542bac537e2dd23835 383 Pfam PF08245 Mur ligase middle domain 41 218 1.2E-7 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SMGD1_RS03155 7acad6b6c6d645542bac537e2dd23835 383 Gene3D G3DSA:3.40.1190.10 3 252 2.1E-63 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SMGD1_RS03155 7acad6b6c6d645542bac537e2dd23835 383 Gene3D G3DSA:3.90.190.20 265 378 2.8E-17 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SMGD1_RS03155 7acad6b6c6d645542bac537e2dd23835 383 TIGRFAM TIGR01499 folC: bifunctional protein FolC 19 376 4.4E-77 T 22-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 SMGD1_RS03155 7acad6b6c6d645542bac537e2dd23835 383 SUPERFAMILY SSF53244 265 380 2.93E-17 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SMGD1_RS03155 7acad6b6c6d645542bac537e2dd23835 383 PANTHER PTHR11136:SF0 19 344 5.9E-58 T 22-04-2016 SMGD1_RS03155 7acad6b6c6d645542bac537e2dd23835 383 SUPERFAMILY SSF53623 7 257 2.2E-53 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SMGD1_RS03155 7acad6b6c6d645542bac537e2dd23835 383 PANTHER PTHR11136 19 344 5.9E-58 T 22-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 SMGD1_RS14130 99615a04bb38f65a3a912876b1d5d4f9 789 Gene3D G3DSA:3.40.50.300 621 787 8.3E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS14130 99615a04bb38f65a3a912876b1d5d4f9 789 SUPERFAMILY SSF52540 615 789 8.13E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS14130 99615a04bb38f65a3a912876b1d5d4f9 789 SUPERFAMILY SSF52540 1 51 8.13E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS14130 99615a04bb38f65a3a912876b1d5d4f9 789 PANTHER PTHR18937:SF214 759 789 1.0E-14 T 22-04-2016 SMGD1_RS14130 99615a04bb38f65a3a912876b1d5d4f9 789 PANTHER PTHR18937:SF214 1 240 1.0E-14 T 22-04-2016 SMGD1_RS14130 99615a04bb38f65a3a912876b1d5d4f9 789 PANTHER PTHR18937:SF214 481 629 1.0E-14 T 22-04-2016 SMGD1_RS14130 99615a04bb38f65a3a912876b1d5d4f9 789 PANTHER PTHR18937:SF214 272 369 1.0E-14 T 22-04-2016 SMGD1_RS14130 99615a04bb38f65a3a912876b1d5d4f9 789 SUPERFAMILY SSF52540 1 284 1.41E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS14130 99615a04bb38f65a3a912876b1d5d4f9 789 Gene3D G3DSA:3.40.50.300 1 144 3.3E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS14130 99615a04bb38f65a3a912876b1d5d4f9 789 Pfam PF13476 AAA domain 5 238 2.9E-23 T 22-04-2016 SMGD1_RS14130 99615a04bb38f65a3a912876b1d5d4f9 789 PANTHER PTHR18937 759 789 1.0E-14 T 22-04-2016 SMGD1_RS14130 99615a04bb38f65a3a912876b1d5d4f9 789 PANTHER PTHR18937 1 240 1.0E-14 T 22-04-2016 SMGD1_RS14130 99615a04bb38f65a3a912876b1d5d4f9 789 PANTHER PTHR18937 481 629 1.0E-14 T 22-04-2016 SMGD1_RS14130 99615a04bb38f65a3a912876b1d5d4f9 789 PANTHER PTHR18937 272 369 1.0E-14 T 22-04-2016 SMGD1_RS06310 bbc3404f70d2655b827ee2f6eafb4b76 308 Gene3D G3DSA:3.30.1060.10 149 303 5.7E-54 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 SMGD1_RS06310 bbc3404f70d2655b827ee2f6eafb4b76 308 SUPERFAMILY SSF51316 26 151 1.41E-45 T 22-04-2016 IPR011057 Mss4-like SMGD1_RS06310 bbc3404f70d2655b827ee2f6eafb4b76 308 Pfam PF01625 Peptide methionine sulfoxide reductase 153 302 7.8E-55 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 SMGD1_RS06310 bbc3404f70d2655b827ee2f6eafb4b76 308 Gene3D G3DSA:2.170.150.20 26 148 4.0E-48 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 SMGD1_RS06310 bbc3404f70d2655b827ee2f6eafb4b76 308 SUPERFAMILY SSF55068 135 304 9.81E-63 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 SMGD1_RS06310 bbc3404f70d2655b827ee2f6eafb4b76 308 PANTHER PTHR10173 94 302 1.4E-65 T 22-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 SMGD1_RS06310 bbc3404f70d2655b827ee2f6eafb4b76 308 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 150 306 31.147 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 SMGD1_RS06310 bbc3404f70d2655b827ee2f6eafb4b76 308 Pfam PF01641 SelR domain 27 139 2.2E-42 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 SMGD1_RS06310 bbc3404f70d2655b827ee2f6eafb4b76 308 PANTHER PTHR10173:SF6 94 302 1.4E-65 T 22-04-2016 SMGD1_RS06310 bbc3404f70d2655b827ee2f6eafb4b76 308 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 153 295 8.8E-48 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 SMGD1_RS09610 6dbe7fe93fc7709bc95f0466c588c1b8 293 SUPERFAMILY SSF49493 200 275 7.46E-15 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 SMGD1_RS09610 6dbe7fe93fc7709bc95f0466c588c1b8 293 Gene3D G3DSA:1.10.287.110 2 99 7.2E-32 T 22-04-2016 IPR001623 DnaJ domain SMGD1_RS09610 6dbe7fe93fc7709bc95f0466c588c1b8 293 Pfam PF01556 DnaJ C terminal domain 131 273 1.5E-31 T 22-04-2016 IPR002939 Chaperone DnaJ, C-terminal SMGD1_RS09610 6dbe7fe93fc7709bc95f0466c588c1b8 293 SMART SM00271 3 60 5.0E-28 T 22-04-2016 IPR001623 DnaJ domain SMGD1_RS09610 6dbe7fe93fc7709bc95f0466c588c1b8 293 SUPERFAMILY SSF46565 3 117 1.7E-32 T 22-04-2016 IPR001623 DnaJ domain SMGD1_RS09610 6dbe7fe93fc7709bc95f0466c588c1b8 293 PRINTS PR00625 DnaJ domain signature 40 60 1.2E-24 T 22-04-2016 IPR001623 DnaJ domain SMGD1_RS09610 6dbe7fe93fc7709bc95f0466c588c1b8 293 PRINTS PR00625 DnaJ domain signature 24 39 1.2E-24 T 22-04-2016 IPR001623 DnaJ domain SMGD1_RS09610 6dbe7fe93fc7709bc95f0466c588c1b8 293 PRINTS PR00625 DnaJ domain signature 60 79 1.2E-24 T 22-04-2016 IPR001623 DnaJ domain SMGD1_RS09610 6dbe7fe93fc7709bc95f0466c588c1b8 293 PRINTS PR00625 DnaJ domain signature 6 24 1.2E-24 T 22-04-2016 IPR001623 DnaJ domain SMGD1_RS09610 6dbe7fe93fc7709bc95f0466c588c1b8 293 SUPERFAMILY SSF49493 126 196 6.28E-12 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 SMGD1_RS09610 6dbe7fe93fc7709bc95f0466c588c1b8 293 Gene3D G3DSA:2.60.260.20 130 193 8.6E-11 T 22-04-2016 SMGD1_RS09610 6dbe7fe93fc7709bc95f0466c588c1b8 293 Gene3D G3DSA:2.60.260.20 198 274 1.8E-14 T 22-04-2016 SMGD1_RS09610 6dbe7fe93fc7709bc95f0466c588c1b8 293 Pfam PF00226 DnaJ domain 5 65 2.2E-25 T 22-04-2016 IPR001623 DnaJ domain SMGD1_RS09610 6dbe7fe93fc7709bc95f0466c588c1b8 293 PANTHER PTHR24078 1 288 7.4E-68 T 22-04-2016 SMGD1_RS09610 6dbe7fe93fc7709bc95f0466c588c1b8 293 PANTHER PTHR24078:SF231 1 288 7.4E-68 T 22-04-2016 SMGD1_RS09610 6dbe7fe93fc7709bc95f0466c588c1b8 293 ProSitePatterns PS00636 Nt-dnaJ domain signature. 45 64 - T 22-04-2016 IPR018253 DnaJ domain, conserved site SMGD1_RS14370 b9eb1c910c7db01def1e64c7d3b9f0e0 218 PANTHER PTHR33693 25 216 6.3E-37 T 22-04-2016 SMGD1_RS14370 b9eb1c910c7db01def1e64c7d3b9f0e0 218 Pfam PF03167 Uracil DNA glycosylase superfamily 66 212 4.8E-31 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like SMGD1_RS14370 b9eb1c910c7db01def1e64c7d3b9f0e0 218 Gene3D G3DSA:3.40.470.10 40 217 2.0E-43 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like SMGD1_RS14370 b9eb1c910c7db01def1e64c7d3b9f0e0 218 PANTHER PTHR33693:SF1 25 216 6.3E-37 T 22-04-2016 SMGD1_RS14370 b9eb1c910c7db01def1e64c7d3b9f0e0 218 SMART SM00987 65 212 6.0E-14 T 22-04-2016 SMGD1_RS14370 b9eb1c910c7db01def1e64c7d3b9f0e0 218 SMART SM00986 65 212 6.0E-14 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like SMGD1_RS14370 b9eb1c910c7db01def1e64c7d3b9f0e0 218 SUPERFAMILY SSF52141 39 217 3.92E-42 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like SMGD1_RS06465 70735b309f6c3a1d685e1659779c45bf 387 PANTHER PTHR11609 1 381 8.6E-177 T 22-04-2016 SMGD1_RS06465 70735b309f6c3a1d685e1659779c45bf 387 Gene3D G3DSA:3.30.470.20 197 384 3.3E-59 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SMGD1_RS06465 70735b309f6c3a1d685e1659779c45bf 387 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 13 384 1.1E-157 T 22-04-2016 IPR005862 Phosphoribosylglycinamide formyltransferase 2 GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 UniPathway: UPA00074 SMGD1_RS06465 70735b309f6c3a1d685e1659779c45bf 387 Pfam PF02222 ATP-grasp domain 123 292 3.2E-51 T 22-04-2016 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type UniPathway: UPA00074 SMGD1_RS06465 70735b309f6c3a1d685e1659779c45bf 387 Gene3D G3DSA:3.40.50.20 6 119 1.6E-37 T 22-04-2016 IPR016185 Pre-ATP-grasp domain SMGD1_RS06465 70735b309f6c3a1d685e1659779c45bf 387 SUPERFAMILY SSF56059 113 312 3.18E-54 T 22-04-2016 SMGD1_RS06465 70735b309f6c3a1d685e1659779c45bf 387 PANTHER PTHR11609:SF7 1 381 8.6E-177 T 22-04-2016 SMGD1_RS06465 70735b309f6c3a1d685e1659779c45bf 387 Gene3D G3DSA:3.30.1490.20 124 196 1.2E-21 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SMGD1_RS06465 70735b309f6c3a1d685e1659779c45bf 387 SUPERFAMILY SSF52440 4 110 8.34E-34 T 22-04-2016 IPR016185 Pre-ATP-grasp domain SMGD1_RS06465 70735b309f6c3a1d685e1659779c45bf 387 Hamap MF_01643 Phosphoribosylglycinamide formyltransferase 2 [purT]. 7 387 47.311 T 22-04-2016 IPR005862 Phosphoribosylglycinamide formyltransferase 2 GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 UniPathway: UPA00074 SMGD1_RS06465 70735b309f6c3a1d685e1659779c45bf 387 SUPERFAMILY SSF51246 318 384 2.2E-7 T 22-04-2016 IPR011054 Rudiment single hybrid motif SMGD1_RS02915 968cdd694049d63e96751c8a54963175 239 Pfam PF12801 4Fe-4S binding domain 34 72 2.3E-11 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SMGD1_RS02915 968cdd694049d63e96751c8a54963175 239 Pfam PF12801 4Fe-4S binding domain 129 171 1.9E-6 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SMGD1_RS02915 968cdd694049d63e96751c8a54963175 239 PANTHER PTHR30176 1 230 1.1E-41 T 22-04-2016 SMGD1_RS02915 968cdd694049d63e96751c8a54963175 239 Gene3D G3DSA:1.10.1060.10 54 89 3.6E-6 T 22-04-2016 SMGD1_RS02915 968cdd694049d63e96751c8a54963175 239 Gene3D G3DSA:3.30.70.20 144 231 1.3E-14 T 22-04-2016 SMGD1_RS02915 968cdd694049d63e96751c8a54963175 239 PANTHER PTHR30176:SF2 1 230 1.1E-41 T 22-04-2016 SMGD1_RS02915 968cdd694049d63e96751c8a54963175 239 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 178 189 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SMGD1_RS02915 968cdd694049d63e96751c8a54963175 239 TIGRFAM TIGR02163 napH_: ferredoxin-type protein, NapH/MauN family 2 227 1.7E-93 T 22-04-2016 IPR011886 Ferredoxin-type protein, NapH/MauN family GO:0005506 SMGD1_RS02915 968cdd694049d63e96751c8a54963175 239 SUPERFAMILY SSF54862 107 226 7.33E-20 T 22-04-2016 SMGD1_RS02915 968cdd694049d63e96751c8a54963175 239 SUPERFAMILY SSF54862 44 66 7.33E-20 T 22-04-2016 SMGD1_RS02915 968cdd694049d63e96751c8a54963175 239 Pfam PF13237 4Fe-4S dicluster domain 173 219 5.9E-6 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SMGD1_RS05005 91b74223a9cfe278653de34ad6d6768a 802 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 375 537 2.5E-43 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS05005 91b74223a9cfe278653de34ad6d6768a 802 SMART SM00086 203 245 0.0086 T 22-04-2016 IPR001610 PAC motif SMGD1_RS05005 91b74223a9cfe278653de34ad6d6768a 802 SMART SM00086 325 367 2.2 T 22-04-2016 IPR001610 PAC motif SMGD1_RS05005 91b74223a9cfe278653de34ad6d6768a 802 SMART SM00086 78 117 220.0 T 22-04-2016 IPR001610 PAC motif SMGD1_RS05005 91b74223a9cfe278653de34ad6d6768a 802 Gene3D G3DSA:3.30.450.20 109 246 1.2E-25 T 22-04-2016 SMGD1_RS05005 91b74223a9cfe278653de34ad6d6768a 802 Pfam PF00563 EAL domain 555 789 5.5E-69 T 22-04-2016 IPR001633 EAL domain SMGD1_RS05005 91b74223a9cfe278653de34ad6d6768a 802 Pfam PF08448 PAS fold 11 117 8.8E-14 T 22-04-2016 IPR013656 PAS fold-4 SMGD1_RS05005 91b74223a9cfe278653de34ad6d6768a 802 Gene3D G3DSA:3.30.450.20 247 360 4.2E-23 T 22-04-2016 SMGD1_RS05005 91b74223a9cfe278653de34ad6d6768a 802 Pfam PF08447 PAS fold 152 239 1.5E-20 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 SMGD1_RS05005 91b74223a9cfe278653de34ad6d6768a 802 SUPERFAMILY SSF55073 383 540 2.82E-49 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS05005 91b74223a9cfe278653de34ad6d6768a 802 SUPERFAMILY SSF55785 262 364 1.08E-22 T 22-04-2016 IPR000014 PAS domain SMGD1_RS05005 91b74223a9cfe278653de34ad6d6768a 802 Gene3D G3DSA:3.20.20.450 553 801 7.5E-92 T 22-04-2016 IPR001633 EAL domain SMGD1_RS05005 91b74223a9cfe278653de34ad6d6768a 802 Gene3D G3DSA:3.30.70.270 379 547 9.6E-55 T 22-04-2016 SMGD1_RS05005 91b74223a9cfe278653de34ad6d6768a 802 SUPERFAMILY SSF55785 136 246 2.27E-18 T 22-04-2016 IPR000014 PAS domain SMGD1_RS05005 91b74223a9cfe278653de34ad6d6768a 802 Pfam PF00990 Diguanylate cyclase, GGDEF domain 378 535 3.3E-49 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS05005 91b74223a9cfe278653de34ad6d6768a 802 SMART SM00267 367 539 1.4E-62 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS05005 91b74223a9cfe278653de34ad6d6768a 802 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 139 252 4.6E-8 T 22-04-2016 IPR000014 PAS domain SMGD1_RS05005 91b74223a9cfe278653de34ad6d6768a 802 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 258 372 1.7E-15 T 22-04-2016 IPR000014 PAS domain SMGD1_RS05005 91b74223a9cfe278653de34ad6d6768a 802 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 9 122 9.2E-9 T 22-04-2016 IPR000014 PAS domain SMGD1_RS05005 91b74223a9cfe278653de34ad6d6768a 802 SMART SM00052 549 794 1.6E-99 T 22-04-2016 IPR001633 EAL domain SMGD1_RS05005 91b74223a9cfe278653de34ad6d6768a 802 PANTHER PTHR33121:SF13 499 802 4.6E-79 T 22-04-2016 SMGD1_RS05005 91b74223a9cfe278653de34ad6d6768a 802 PANTHER PTHR33121:SF13 343 354 4.6E-79 T 22-04-2016 SMGD1_RS05005 91b74223a9cfe278653de34ad6d6768a 802 SUPERFAMILY SSF55785 10 116 7.33E-14 T 22-04-2016 IPR000014 PAS domain SMGD1_RS05005 91b74223a9cfe278653de34ad6d6768a 802 Pfam PF13426 PAS domain 264 366 4.2E-14 T 22-04-2016 IPR000014 PAS domain SMGD1_RS05005 91b74223a9cfe278653de34ad6d6768a 802 Gene3D G3DSA:3.30.450.20 9 108 2.2E-13 T 22-04-2016 SMGD1_RS05005 91b74223a9cfe278653de34ad6d6768a 802 PANTHER PTHR33121 499 802 4.6E-79 T 22-04-2016 SMGD1_RS05005 91b74223a9cfe278653de34ad6d6768a 802 PANTHER PTHR33121 343 354 4.6E-79 T 22-04-2016 SMGD1_RS05005 91b74223a9cfe278653de34ad6d6768a 802 SMART SM00091 253 323 2.0E-5 T 22-04-2016 IPR000014 PAS domain SMGD1_RS05005 91b74223a9cfe278653de34ad6d6768a 802 SMART SM00091 5 71 0.035 T 22-04-2016 IPR000014 PAS domain SMGD1_RS05005 91b74223a9cfe278653de34ad6d6768a 802 SMART SM00091 129 197 5.4 T 22-04-2016 IPR000014 PAS domain SMGD1_RS05005 91b74223a9cfe278653de34ad6d6768a 802 SUPERFAMILY SSF141868 554 800 3.4E-85 T 22-04-2016 IPR001633 EAL domain SMGD1_RS14445 544b75fa8bf9c0c7d125961c7e9fc6f1 441 Gene3D G3DSA:3.30.450.40 1 75 1.2E-7 T 22-04-2016 IPR029016 GAF domain-like SMGD1_RS14445 544b75fa8bf9c0c7d125961c7e9fc6f1 441 PANTHER PTHR10799 272 429 1.8E-46 T 22-04-2016 SMGD1_RS14445 544b75fa8bf9c0c7d125961c7e9fc6f1 441 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 235 399 1.2E-50 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS14445 544b75fa8bf9c0c7d125961c7e9fc6f1 441 SMART SM00267 228 400 5.9E-66 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS14445 544b75fa8bf9c0c7d125961c7e9fc6f1 441 PANTHER PTHR10799:SF774 272 429 1.8E-46 T 22-04-2016 SMGD1_RS14445 544b75fa8bf9c0c7d125961c7e9fc6f1 441 Pfam PF00990 Diguanylate cyclase, GGDEF domain 239 396 2.2E-54 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS14445 544b75fa8bf9c0c7d125961c7e9fc6f1 441 SUPERFAMILY SSF55781 1 74 8.51E-11 T 22-04-2016 IPR029016 GAF domain-like SMGD1_RS14445 544b75fa8bf9c0c7d125961c7e9fc6f1 441 PANTHER PTHR10799 1 60 1.8E-46 T 22-04-2016 SMGD1_RS14445 544b75fa8bf9c0c7d125961c7e9fc6f1 441 Gene3D G3DSA:3.30.450.20 93 219 7.4E-11 T 22-04-2016 SMGD1_RS14445 544b75fa8bf9c0c7d125961c7e9fc6f1 441 SUPERFAMILY SSF55785 91 213 4.19E-11 T 22-04-2016 IPR000014 PAS domain SMGD1_RS14445 544b75fa8bf9c0c7d125961c7e9fc6f1 441 Gene3D G3DSA:3.30.70.270 240 405 3.8E-58 T 22-04-2016 SMGD1_RS14445 544b75fa8bf9c0c7d125961c7e9fc6f1 441 PANTHER PTHR10799:SF774 1 60 1.8E-46 T 22-04-2016 SMGD1_RS14445 544b75fa8bf9c0c7d125961c7e9fc6f1 441 Pfam PF08448 PAS fold 111 222 5.5E-6 T 22-04-2016 IPR013656 PAS fold-4 SMGD1_RS14445 544b75fa8bf9c0c7d125961c7e9fc6f1 441 SUPERFAMILY SSF55073 244 402 2.2E-51 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS10935 19f7ac1f3747dedf5a0f71782515c636 395 Gene3D G3DSA:2.40.50.140 35 99 1.5E-4 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMGD1_RS10935 19f7ac1f3747dedf5a0f71782515c636 395 PANTHER PTHR30008 2 346 6.4E-121 T 22-04-2016 SMGD1_RS10935 19f7ac1f3747dedf5a0f71782515c636 395 Pfam PF13742 OB-fold nucleic acid binding domain 4 96 2.1E-26 T 22-04-2016 IPR025824 OB-fold nucleic acid binding domain GO:0003676 SMGD1_RS10935 19f7ac1f3747dedf5a0f71782515c636 395 PANTHER PTHR30008:SF0 2 346 6.4E-121 T 22-04-2016 SMGD1_RS10935 19f7ac1f3747dedf5a0f71782515c636 395 Pfam PF02601 Exonuclease VII, large subunit 120 347 4.0E-72 T 22-04-2016 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 SMGD1_RS10935 19f7ac1f3747dedf5a0f71782515c636 395 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 6 388 1.3E-131 T 22-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 SMGD1_RS10935 19f7ac1f3747dedf5a0f71782515c636 395 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 1 389 25.42 T 22-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 SMGD1_RS06735 e1bc2e453fcdccfd682c13449a1d16cc 351 PANTHER PTHR38811:SF1 1 349 1.9E-62 T 22-04-2016 SMGD1_RS06735 e1bc2e453fcdccfd682c13449a1d16cc 351 Hamap MF_01086 UPF0284 protein . 1 351 86.217 T 22-04-2016 IPR002805 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, putative SMGD1_RS06735 e1bc2e453fcdccfd682c13449a1d16cc 351 PANTHER PTHR38811 1 349 1.9E-62 T 22-04-2016 SMGD1_RS06735 e1bc2e453fcdccfd682c13449a1d16cc 351 Gene3D G3DSA:3.40.50.10210 69 329 3.6E-17 T 22-04-2016 SMGD1_RS06735 e1bc2e453fcdccfd682c13449a1d16cc 351 SUPERFAMILY SSF52733 70 348 1.03E-35 T 22-04-2016 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 SMGD1_RS07425 4fd92ea143ff157aff66da4ef19304ec 1008 Pfam PF00656 Caspase domain 771 997 1.5E-18 T 22-04-2016 SMGD1_RS07425 4fd92ea143ff157aff66da4ef19304ec 1008 Gene3D G3DSA:3.40.50.1460 928 998 9.7E-4 T 22-04-2016 IPR029030 Caspase-like domain SMGD1_RS07425 4fd92ea143ff157aff66da4ef19304ec 1008 Gene3D G3DSA:3.40.50.1460 771 917 3.6E-8 T 22-04-2016 IPR029030 Caspase-like domain SMGD1_RS07425 4fd92ea143ff157aff66da4ef19304ec 1008 SUPERFAMILY SSF50978 27 210 6.96E-48 T 22-04-2016 IPR017986 WD40-repeat-containing domain GO:0005515 SMGD1_RS07425 4fd92ea143ff157aff66da4ef19304ec 1008 SUPERFAMILY SSF50978 243 367 6.96E-48 T 22-04-2016 IPR017986 WD40-repeat-containing domain GO:0005515 SMGD1_RS07425 4fd92ea143ff157aff66da4ef19304ec 1008 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 140 154 - T 22-04-2016 IPR019775 WD40 repeat, conserved site SMGD1_RS07425 4fd92ea143ff157aff66da4ef19304ec 1008 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 486 500 - T 22-04-2016 IPR019775 WD40 repeat, conserved site SMGD1_RS07425 4fd92ea143ff157aff66da4ef19304ec 1008 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 44 58 - T 22-04-2016 IPR019775 WD40 repeat, conserved site SMGD1_RS07425 4fd92ea143ff157aff66da4ef19304ec 1008 SUPERFAMILY SSF82171 560 573 7.85E-13 T 22-04-2016 SMGD1_RS07425 4fd92ea143ff157aff66da4ef19304ec 1008 SUPERFAMILY SSF82171 383 506 7.85E-13 T 22-04-2016 SMGD1_RS07425 4fd92ea143ff157aff66da4ef19304ec 1008 SUPERFAMILY SSF82171 291 355 7.85E-13 T 22-04-2016 SMGD1_RS07425 4fd92ea143ff157aff66da4ef19304ec 1008 SUPERFAMILY SSF52129 770 997 1.86E-12 T 22-04-2016 IPR029030 Caspase-like domain SMGD1_RS07425 4fd92ea143ff157aff66da4ef19304ec 1008 SMART SM00320 157 198 1.2 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS07425 4fd92ea143ff157aff66da4ef19304ec 1008 SMART SM00320 462 499 3.3E-7 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS07425 4fd92ea143ff157aff66da4ef19304ec 1008 SMART SM00320 17 57 0.14 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS07425 4fd92ea143ff157aff66da4ef19304ec 1008 SMART SM00320 283 322 13.0 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS07425 4fd92ea143ff157aff66da4ef19304ec 1008 SMART SM00320 201 237 31.0 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS07425 4fd92ea143ff157aff66da4ef19304ec 1008 SMART SM00320 114 153 5.8E-11 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS07425 4fd92ea143ff157aff66da4ef19304ec 1008 SMART SM00320 63 111 120.0 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS07425 4fd92ea143ff157aff66da4ef19304ec 1008 PRINTS PR00320 G protein beta WD-40 repeat signature 486 500 1.6E-7 T 22-04-2016 IPR020472 G-protein beta WD-40 repeat SMGD1_RS07425 4fd92ea143ff157aff66da4ef19304ec 1008 PRINTS PR00320 G protein beta WD-40 repeat signature 140 154 1.6E-7 T 22-04-2016 IPR020472 G-protein beta WD-40 repeat SMGD1_RS07425 4fd92ea143ff157aff66da4ef19304ec 1008 PRINTS PR00320 G protein beta WD-40 repeat signature 44 58 1.6E-7 T 22-04-2016 IPR020472 G-protein beta WD-40 repeat SMGD1_RS07425 4fd92ea143ff157aff66da4ef19304ec 1008 Pfam PF00400 WD domain, G-beta repeat 466 499 0.0015 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS07425 4fd92ea143ff157aff66da4ef19304ec 1008 Pfam PF00400 WD domain, G-beta repeat 116 153 4.1E-7 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS07425 4fd92ea143ff157aff66da4ef19304ec 1008 Pfam PF00400 WD domain, G-beta repeat 27 57 0.17 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS07425 4fd92ea143ff157aff66da4ef19304ec 1008 PANTHER PTHR22847 44 204 6.9E-45 T 22-04-2016 SMGD1_RS07425 4fd92ea143ff157aff66da4ef19304ec 1008 PANTHER PTHR22847 287 344 6.9E-45 T 22-04-2016 SMGD1_RS07425 4fd92ea143ff157aff66da4ef19304ec 1008 PANTHER PTHR22847 441 514 6.9E-45 T 22-04-2016 SMGD1_RS07425 4fd92ea143ff157aff66da4ef19304ec 1008 Gene3D G3DSA:2.130.10.10 27 260 6.9E-38 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 SMGD1_RS07425 4fd92ea143ff157aff66da4ef19304ec 1008 Gene3D G3DSA:2.130.10.10 444 516 4.0E-24 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 SMGD1_RS07425 4fd92ea143ff157aff66da4ef19304ec 1008 Gene3D G3DSA:2.130.10.10 261 402 4.0E-24 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 SMGD1_RS08605 2c6a0281d6a73c2ef8eedb7c722fd50b 78 Pfam PF02416 mttA/Hcf106 family 5 50 1.7E-19 T 22-04-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 SMGD1_RS08605 2c6a0281d6a73c2ef8eedb7c722fd50b 78 PANTHER PTHR33162 1 48 2.5E-14 T 22-04-2016 SMGD1_RS08605 2c6a0281d6a73c2ef8eedb7c722fd50b 78 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 75 21.516 T 22-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 SMGD1_RS08605 2c6a0281d6a73c2ef8eedb7c722fd50b 78 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 47 1.6E-19 T 22-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 SMGD1_RS14290 b6a66404aff75a96264c2ce0df912cce 236 SUPERFAMILY SSF55120 1 236 6.91E-62 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMGD1_RS14290 b6a66404aff75a96264c2ce0df912cce 236 Pfam PF01416 tRNA pseudouridine synthase 8 104 3.2E-7 T 22-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMGD1_RS14290 b6a66404aff75a96264c2ce0df912cce 236 Pfam PF01416 tRNA pseudouridine synthase 142 236 3.1E-14 T 22-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMGD1_RS14290 b6a66404aff75a96264c2ce0df912cce 236 Gene3D G3DSA:3.30.70.580 2 105 2.0E-28 T 22-04-2016 IPR020094 Pseudouridine synthase I, TruA, N-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMGD1_RS14290 b6a66404aff75a96264c2ce0df912cce 236 PANTHER PTHR11142 1 236 1.9E-63 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMGD1_RS14290 b6a66404aff75a96264c2ce0df912cce 236 PIRSF PIRSF001430 1 236 1.2E-70 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMGD1_RS14290 b6a66404aff75a96264c2ce0df912cce 236 PANTHER PTHR11142:SF0 1 236 1.9E-63 T 22-04-2016 SMGD1_RS14290 b6a66404aff75a96264c2ce0df912cce 236 Gene3D G3DSA:3.30.70.660 107 236 5.3E-26 T 22-04-2016 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMGD1_RS14290 b6a66404aff75a96264c2ce0df912cce 236 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 3 230 6.1E-56 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMGD1_RS14290 b6a66404aff75a96264c2ce0df912cce 236 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 1 236 29.767 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMGD1_RS03805 ed4fbc6b80767cd5d0818b329de55138 865 Gene3D G3DSA:2.60.40.10 306 382 1.0E-14 T 22-04-2016 IPR013783 Immunoglobulin-like fold SMGD1_RS03805 ed4fbc6b80767cd5d0818b329de55138 865 PRINTS PR00765 Carboxypeptidase A metalloprotease (M14) family signature 56 70 2.6E-7 T 22-04-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 SMGD1_RS03805 ed4fbc6b80767cd5d0818b329de55138 865 PRINTS PR00765 Carboxypeptidase A metalloprotease (M14) family signature 135 143 2.6E-7 T 22-04-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 SMGD1_RS03805 ed4fbc6b80767cd5d0818b329de55138 865 PRINTS PR00765 Carboxypeptidase A metalloprotease (M14) family signature 31 43 2.6E-7 T 22-04-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 SMGD1_RS03805 ed4fbc6b80767cd5d0818b329de55138 865 PANTHER PTHR11705 4 230 9.3E-63 T 22-04-2016 SMGD1_RS03805 ed4fbc6b80767cd5d0818b329de55138 865 SMART SM00631 5 280 2.0E-45 T 22-04-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 SMGD1_RS03805 ed4fbc6b80767cd5d0818b329de55138 865 SUPERFAMILY SSF49265 304 396 1.75E-9 T 22-04-2016 IPR003961 Fibronectin type III GO:0005515 SMGD1_RS03805 ed4fbc6b80767cd5d0818b329de55138 865 SUPERFAMILY SSF53187 3 292 2.05E-66 T 22-04-2016 SMGD1_RS03805 ed4fbc6b80767cd5d0818b329de55138 865 SMART SM00060 301 382 0.0064 T 22-04-2016 IPR003961 Fibronectin type III GO:0005515 SMGD1_RS03805 ed4fbc6b80767cd5d0818b329de55138 865 Pfam PF00246 Zinc carboxypeptidase 14 263 7.3E-53 T 22-04-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 SMGD1_RS03805 ed4fbc6b80767cd5d0818b329de55138 865 ProSitePatterns PS00132 Zinc carboxypeptidases, zinc-binding region 1 signature. 56 78 - T 22-04-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 SMGD1_RS03805 ed4fbc6b80767cd5d0818b329de55138 865 Gene3D G3DSA:3.40.630.10 3 294 2.9E-70 T 22-04-2016 SMGD1_RS00470 67f3ec7850a4ef93c816266d8ff20b7c 208 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 2 179 3.0E-54 T 22-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 SMGD1_RS00470 67f3ec7850a4ef93c816266d8ff20b7c 208 PANTHER PTHR21403:SF3 1 208 2.8E-71 T 22-04-2016 SMGD1_RS00470 67f3ec7850a4ef93c816266d8ff20b7c 208 Gene3D G3DSA:3.40.190.10 1 111 2.6E-26 T 22-04-2016 SMGD1_RS00470 67f3ec7850a4ef93c816266d8ff20b7c 208 Gene3D G3DSA:3.40.190.10 112 172 1.9E-28 T 22-04-2016 SMGD1_RS00470 67f3ec7850a4ef93c816266d8ff20b7c 208 Pfam PF01634 ATP phosphoribosyltransferase 47 199 3.4E-45 T 22-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 SMGD1_RS00470 67f3ec7850a4ef93c816266d8ff20b7c 208 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 138 159 - T 22-04-2016 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 SMGD1_RS00470 67f3ec7850a4ef93c816266d8ff20b7c 208 SUPERFAMILY SSF53850 1 203 2.15E-59 T 22-04-2016 SMGD1_RS00470 67f3ec7850a4ef93c816266d8ff20b7c 208 Hamap MF_01018 ATP phosphoribosyltransferase [hisG]. 1 203 49.052 T 22-04-2016 IPR024893 ATP phosphoribosyltransferase HisG, short form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 SMGD1_RS00470 67f3ec7850a4ef93c816266d8ff20b7c 208 PANTHER PTHR21403 1 208 2.8E-71 T 22-04-2016 IPR001348 ATP phosphoribosyltransferase HisG GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 SMGD1_RS10210 711b94de3ab6477c6a4d1b758153933b 235 Pfam PF13672 Protein phosphatase 2C 17 213 3.7E-30 T 22-04-2016 SMGD1_RS10210 711b94de3ab6477c6a4d1b758153933b 235 SMART SM00332 9 229 0.0061 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 SMGD1_RS10210 711b94de3ab6477c6a4d1b758153933b 235 SUPERFAMILY SSF81606 20 228 2.35E-16 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 SMGD1_RS10210 711b94de3ab6477c6a4d1b758153933b 235 Gene3D G3DSA:3.60.40.10 25 139 5.7E-7 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 SMGD1_RS11700 147d4b50ae916fe8550b76fe39020ca5 174 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 22 95 7.6E-11 T 22-04-2016 IPR000014 PAS domain SMGD1_RS11700 147d4b50ae916fe8550b76fe39020ca5 174 PANTHER PTHR32089 8 94 3.2E-12 T 22-04-2016 SMGD1_RS11700 147d4b50ae916fe8550b76fe39020ca5 174 SMART SM00091 7 73 0.0054 T 22-04-2016 IPR000014 PAS domain SMGD1_RS11700 147d4b50ae916fe8550b76fe39020ca5 174 PANTHER PTHR32089:SF52 8 94 3.2E-12 T 22-04-2016 SMGD1_RS11700 147d4b50ae916fe8550b76fe39020ca5 174 Gene3D G3DSA:3.30.450.20 19 121 6.3E-19 T 22-04-2016 SMGD1_RS11700 147d4b50ae916fe8550b76fe39020ca5 174 SUPERFAMILY SSF55785 19 105 1.33E-22 T 22-04-2016 IPR000014 PAS domain SMGD1_RS11700 147d4b50ae916fe8550b76fe39020ca5 174 Pfam PF08447 PAS fold 30 107 1.5E-12 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 SMGD1_RS13480 5456c2903ff7b5677320bdd45970b0b8 191 Pfam PF01863 Protein of unknown function DUF45 8 185 5.8E-47 T 22-04-2016 IPR002725 Protein of unknown function DUF45 SMGD1_RS13480 5456c2903ff7b5677320bdd45970b0b8 191 PANTHER PTHR30399 10 184 4.5E-26 T 22-04-2016 SMGD1_RS10470 d79bed1feeae6f777d7a6d2b54b7c87b 103 Gene3D G3DSA:3.10.490.10 4 101 3.4E-13 T 22-04-2016 IPR013024 Butirosin biosynthesis, BtrG-like SMGD1_RS10470 d79bed1feeae6f777d7a6d2b54b7c87b 103 SUPERFAMILY SSF110857 2 99 9.03E-15 T 22-04-2016 IPR013024 Butirosin biosynthesis, BtrG-like SMGD1_RS10470 d79bed1feeae6f777d7a6d2b54b7c87b 103 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 5 100 5.3E-13 T 22-04-2016 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like SMGD1_RS14010 5710fdc04371b94aeddb1f137113f0c9 584 SUPERFAMILY SSF82714 210 303 9.81E-7 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMGD1_RS14010 5710fdc04371b94aeddb1f137113f0c9 584 PANTHER PTHR32063:SF16 1 353 2.2E-91 T 22-04-2016 SMGD1_RS14010 5710fdc04371b94aeddb1f137113f0c9 584 PANTHER PTHR32063:SF16 380 550 2.2E-91 T 22-04-2016 SMGD1_RS14010 5710fdc04371b94aeddb1f137113f0c9 584 SUPERFAMILY SSF82866 368 551 3.27E-32 T 22-04-2016 SMGD1_RS14010 5710fdc04371b94aeddb1f137113f0c9 584 Pfam PF00873 AcrB/AcrD/AcrF family 14 550 1.8E-40 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMGD1_RS14010 5710fdc04371b94aeddb1f137113f0c9 584 PANTHER PTHR32063 1 353 2.2E-91 T 22-04-2016 SMGD1_RS14010 5710fdc04371b94aeddb1f137113f0c9 584 PANTHER PTHR32063 380 550 2.2E-91 T 22-04-2016 SMGD1_RS14010 5710fdc04371b94aeddb1f137113f0c9 584 Gene3D G3DSA:3.30.2090.10 210 304 2.1E-5 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMGD1_RS14010 5710fdc04371b94aeddb1f137113f0c9 584 Gene3D G3DSA:1.10.3850.10 311 551 1.0E-44 T 22-04-2016 SMGD1_RS00685 33917c4c059b7496d08e4fc01c673e73 427 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 18 416 1.3E-113 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 SMGD1_RS00685 33917c4c059b7496d08e4fc01c673e73 427 PANTHER PTHR21090 18 427 2.4E-141 T 22-04-2016 SMGD1_RS00685 33917c4c059b7496d08e4fc01c673e73 427 PIRSF PIRSF000505 4 426 3.1E-107 T 22-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 SMGD1_RS00685 33917c4c059b7496d08e4fc01c673e73 427 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 18 421 7.1E-120 T 22-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 SMGD1_RS00685 33917c4c059b7496d08e4fc01c673e73 427 PANTHER PTHR21090:SF5 18 427 2.4E-141 T 22-04-2016 SMGD1_RS00685 33917c4c059b7496d08e4fc01c673e73 427 Gene3D G3DSA:3.65.10.10 23 232 7.2E-52 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 SMGD1_RS00685 33917c4c059b7496d08e4fc01c673e73 427 SUPERFAMILY SSF55205 19 420 2.45E-113 T 22-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 SMGD1_RS00685 33917c4c059b7496d08e4fc01c673e73 427 ProSitePatterns PS00104 EPSP synthase signature 1. 86 100 - T 22-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 SMGD1_RS00685 33917c4c059b7496d08e4fc01c673e73 427 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 11 423 30.698 T 22-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 SMGD1_RS00685 33917c4c059b7496d08e4fc01c673e73 427 Gene3D G3DSA:3.65.10.10 233 420 8.8E-46 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 SMGD1_RS00685 33917c4c059b7496d08e4fc01c673e73 427 ProSitePatterns PS00885 EPSP synthase signature 2. 337 355 - T 22-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 SMGD1_RS12260 42cb8869a5d0e918c462fcb47b73fc20 905 TIGRFAM TIGR00593 pola: DNA polymerase I 6 905 1.5E-268 T 22-04-2016 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMGD1_RS12260 42cb8869a5d0e918c462fcb47b73fc20 905 Gene3D G3DSA:3.40.50.1010 4 180 1.9E-52 T 22-04-2016 IPR029060 PIN domain-like SMGD1_RS12260 42cb8869a5d0e918c462fcb47b73fc20 905 Gene3D G3DSA:3.30.70.370 797 904 4.1E-60 T 22-04-2016 SMGD1_RS12260 42cb8869a5d0e918c462fcb47b73fc20 905 Gene3D G3DSA:3.30.70.370 644 692 4.1E-60 T 22-04-2016 SMGD1_RS12260 42cb8869a5d0e918c462fcb47b73fc20 905 SMART SM00279 171 206 7.9E-11 T 22-04-2016 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 SMGD1_RS12260 42cb8869a5d0e918c462fcb47b73fc20 905 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 5 168 4.8E-43 T 22-04-2016 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 SMGD1_RS12260 42cb8869a5d0e918c462fcb47b73fc20 905 SMART SM00475 2 260 2.9E-85 T 22-04-2016 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 SMGD1_RS12260 42cb8869a5d0e918c462fcb47b73fc20 905 SUPERFAMILY SSF88723 3 159 5.15E-45 T 22-04-2016 IPR029060 PIN domain-like SMGD1_RS12260 42cb8869a5d0e918c462fcb47b73fc20 905 PRINTS PR00868 DNA-polymerase family A (pol I) signature 711 724 2.5E-67 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMGD1_RS12260 42cb8869a5d0e918c462fcb47b73fc20 905 PRINTS PR00868 DNA-polymerase family A (pol I) signature 732 757 2.5E-67 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMGD1_RS12260 42cb8869a5d0e918c462fcb47b73fc20 905 PRINTS PR00868 DNA-polymerase family A (pol I) signature 681 704 2.5E-67 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMGD1_RS12260 42cb8869a5d0e918c462fcb47b73fc20 905 PRINTS PR00868 DNA-polymerase family A (pol I) signature 659 674 2.5E-67 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMGD1_RS12260 42cb8869a5d0e918c462fcb47b73fc20 905 PRINTS PR00868 DNA-polymerase family A (pol I) signature 822 838 2.5E-67 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMGD1_RS12260 42cb8869a5d0e918c462fcb47b73fc20 905 PRINTS PR00868 DNA-polymerase family A (pol I) signature 636 658 2.5E-67 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMGD1_RS12260 42cb8869a5d0e918c462fcb47b73fc20 905 PRINTS PR00868 DNA-polymerase family A (pol I) signature 791 802 2.5E-67 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMGD1_RS12260 42cb8869a5d0e918c462fcb47b73fc20 905 PRINTS PR00868 DNA-polymerase family A (pol I) signature 852 865 2.5E-67 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMGD1_RS12260 42cb8869a5d0e918c462fcb47b73fc20 905 PRINTS PR00868 DNA-polymerase family A (pol I) signature 769 780 2.5E-67 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMGD1_RS12260 42cb8869a5d0e918c462fcb47b73fc20 905 Gene3D G3DSA:1.20.1060.10 525 643 3.2E-39 T 22-04-2016 SMGD1_RS12260 42cb8869a5d0e918c462fcb47b73fc20 905 PANTHER PTHR10133 3 281 7.4E-291 T 22-04-2016 SMGD1_RS12260 42cb8869a5d0e918c462fcb47b73fc20 905 PANTHER PTHR10133 301 905 7.4E-291 T 22-04-2016 SMGD1_RS12260 42cb8869a5d0e918c462fcb47b73fc20 905 SMART SM00482 667 869 6.2E-82 T 22-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMGD1_RS12260 42cb8869a5d0e918c462fcb47b73fc20 905 SUPERFAMILY SSF53098 315 496 5.77E-40 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMGD1_RS12260 42cb8869a5d0e918c462fcb47b73fc20 905 Gene3D G3DSA:3.30.420.10 315 523 3.7E-54 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMGD1_RS12260 42cb8869a5d0e918c462fcb47b73fc20 905 PANTHER PTHR10133:SF27 3 281 7.4E-291 T 22-04-2016 SMGD1_RS12260 42cb8869a5d0e918c462fcb47b73fc20 905 PANTHER PTHR10133:SF27 301 905 7.4E-291 T 22-04-2016 SMGD1_RS12260 42cb8869a5d0e918c462fcb47b73fc20 905 Gene3D G3DSA:1.10.150.20 693 796 2.7E-35 T 22-04-2016 SMGD1_RS12260 42cb8869a5d0e918c462fcb47b73fc20 905 Pfam PF00476 DNA polymerase family A 537 902 2.0E-136 T 22-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMGD1_RS12260 42cb8869a5d0e918c462fcb47b73fc20 905 SUPERFAMILY SSF56672 508 904 2.0E-135 T 22-04-2016 SMGD1_RS12260 42cb8869a5d0e918c462fcb47b73fc20 905 SMART SM00474 315 496 4.8E-25 T 22-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 SMGD1_RS12260 42cb8869a5d0e918c462fcb47b73fc20 905 Gene3D G3DSA:1.10.150.20 181 242 8.4E-28 T 22-04-2016 SMGD1_RS12260 42cb8869a5d0e918c462fcb47b73fc20 905 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 169 260 5.6E-28 T 22-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 SMGD1_RS12260 42cb8869a5d0e918c462fcb47b73fc20 905 Pfam PF01612 3'-5' exonuclease 317 495 6.7E-28 T 22-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 SMGD1_RS12260 42cb8869a5d0e918c462fcb47b73fc20 905 SUPERFAMILY SSF47807 168 259 4.78E-26 T 22-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 SMGD1_RS12260 42cb8869a5d0e918c462fcb47b73fc20 905 ProSitePatterns PS00447 DNA polymerase family A signature. 732 751 - T 22-04-2016 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMGD1_RS13575 2a0301f31296968c73eda264f7993f4f 190 Hamap MF_00235 Adenylate kinase [adk]. 3 187 32.9 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SMGD1_RS13575 2a0301f31296968c73eda264f7993f4f 190 SUPERFAMILY SSF52540 2 188 3.41E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS13575 2a0301f31296968c73eda264f7993f4f 190 PANTHER PTHR23359 6 190 3.4E-42 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SMGD1_RS13575 2a0301f31296968c73eda264f7993f4f 190 PRINTS PR00094 Adenylate kinase signature 134 149 1.7E-22 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SMGD1_RS13575 2a0301f31296968c73eda264f7993f4f 190 PRINTS PR00094 Adenylate kinase signature 35 49 1.7E-22 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SMGD1_RS13575 2a0301f31296968c73eda264f7993f4f 190 PRINTS PR00094 Adenylate kinase signature 83 99 1.7E-22 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SMGD1_RS13575 2a0301f31296968c73eda264f7993f4f 190 PRINTS PR00094 Adenylate kinase signature 6 19 1.7E-22 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SMGD1_RS13575 2a0301f31296968c73eda264f7993f4f 190 Pfam PF00406 Adenylate kinase 7 164 7.0E-34 T 22-04-2016 SMGD1_RS13575 2a0301f31296968c73eda264f7993f4f 190 Gene3D G3DSA:3.40.50.300 3 188 2.1E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS13575 2a0301f31296968c73eda264f7993f4f 190 ProSitePatterns PS00113 Adenylate kinase signature. 83 94 - T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SMGD1_RS06325 d86d90b99ede4b84dcc12cb177d099b3 227 SMART SM00422 3 73 4.9E-7 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SMGD1_RS06325 d86d90b99ede4b84dcc12cb177d099b3 227 SUPERFAMILY SSF46955 3 93 8.7E-14 T 22-04-2016 IPR009061 Putative DNA-binding domain SMGD1_RS06325 d86d90b99ede4b84dcc12cb177d099b3 227 Gene3D G3DSA:1.10.1660.10 3 99 3.8E-15 T 22-04-2016 SMGD1_RS06325 d86d90b99ede4b84dcc12cb177d099b3 227 Pfam PF13411 MerR HTH family regulatory protein 3 72 8.8E-16 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SMGD1_RS11050 cdb44e0be5b9de8f806105e970b6c893 361 Gene3D G3DSA:1.10.3210.10 54 118 4.1E-5 T 22-04-2016 IPR006674 HD domain SMGD1_RS11050 cdb44e0be5b9de8f806105e970b6c893 361 SUPERFAMILY SSF52540 199 336 2.34E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS11050 cdb44e0be5b9de8f806105e970b6c893 361 Pfam PF13671 AAA domain 199 324 1.2E-6 T 22-04-2016 SMGD1_RS11050 cdb44e0be5b9de8f806105e970b6c893 361 Gene3D G3DSA:3.40.50.300 199 346 3.2E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS11050 cdb44e0be5b9de8f806105e970b6c893 361 SUPERFAMILY SSF109604 25 123 4.92E-7 T 22-04-2016 SMGD1_RS01610 0fe5cf967dd6a72ccc99675f2501f7cd 277 PANTHER PTHR30244:SF1 3 275 1.6E-63 T 22-04-2016 SMGD1_RS01610 0fe5cf967dd6a72ccc99675f2501f7cd 277 Pfam PF00700 Bacterial flagellin C-terminal helical region 192 276 4.0E-21 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SMGD1_RS01610 0fe5cf967dd6a72ccc99675f2501f7cd 277 PANTHER PTHR30244 3 275 1.6E-63 T 22-04-2016 SMGD1_RS01610 0fe5cf967dd6a72ccc99675f2501f7cd 277 SUPERFAMILY SSF64518 1 276 4.32E-61 T 22-04-2016 SMGD1_RS01610 0fe5cf967dd6a72ccc99675f2501f7cd 277 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 3.1E-29 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SMGD1_RS01610 0fe5cf967dd6a72ccc99675f2501f7cd 277 PRINTS PR00207 Flagellin signature 111 134 4.6E-16 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 SMGD1_RS01610 0fe5cf967dd6a72ccc99675f2501f7cd 277 PRINTS PR00207 Flagellin signature 76 95 4.6E-16 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 SMGD1_RS01610 0fe5cf967dd6a72ccc99675f2501f7cd 277 PRINTS PR00207 Flagellin signature 37 54 4.6E-16 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 SMGD1_RS01610 0fe5cf967dd6a72ccc99675f2501f7cd 277 Gene3D G3DSA:1.20.1330.10 55 233 1.5E-49 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SMGD1_RS06675 2845d22b15f1cc7ebdacba42add4f43a 370 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 136 4.7E-45 T 22-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal SMGD1_RS06675 2845d22b15f1cc7ebdacba42add4f43a 370 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 140 351 7.6E-69 T 22-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain SMGD1_RS06675 2845d22b15f1cc7ebdacba42add4f43a 370 PANTHER PTHR10160 1 370 4.9E-157 T 22-04-2016 SMGD1_RS06675 2845d22b15f1cc7ebdacba42add4f43a 370 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 1 369 9.2E-133 T 22-04-2016 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|UniPathway: UPA00527 SMGD1_RS06675 2845d22b15f1cc7ebdacba42add4f43a 370 Gene3D G3DSA:3.40.50.1770 187 358 5.9E-26 T 22-04-2016 SMGD1_RS06675 2845d22b15f1cc7ebdacba42add4f43a 370 SUPERFAMILY SSF51735 136 302 9.11E-41 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS06675 2845d22b15f1cc7ebdacba42add4f43a 370 PIRSF PIRSF000183 1 370 2.3E-139 T 22-04-2016 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|UniPathway: UPA00527 SMGD1_RS06675 2845d22b15f1cc7ebdacba42add4f43a 370 SMART SM01003 4 136 1.8E-67 T 22-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal SMGD1_RS06675 2845d22b15f1cc7ebdacba42add4f43a 370 Gene3D G3DSA:3.40.50.1770 2 186 3.0E-63 T 22-04-2016 SMGD1_RS06675 2845d22b15f1cc7ebdacba42add4f43a 370 SUPERFAMILY SSF52283 1 136 7.65E-59 T 22-04-2016 SMGD1_RS06675 2845d22b15f1cc7ebdacba42add4f43a 370 SUPERFAMILY SSF52283 304 359 7.65E-59 T 22-04-2016 SMGD1_RS06675 2845d22b15f1cc7ebdacba42add4f43a 370 SMART SM01002 148 296 1.4E-60 T 22-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain SMGD1_RS13985 00e23ba8060a90b617e52cef9f094b42 349 PIRSF PIRSF001455 3 348 1.8E-100 T 22-04-2016 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 SMGD1_RS13985 00e23ba8060a90b617e52cef9f094b42 349 Gene3D G3DSA:3.40.50.1970 23 164 1.1E-55 T 22-04-2016 SMGD1_RS13985 00e23ba8060a90b617e52cef9f094b42 349 Gene3D G3DSA:1.20.1090.10 165 344 2.3E-58 T 22-04-2016 SMGD1_RS13985 00e23ba8060a90b617e52cef9f094b42 349 PANTHER PTHR21090 1 346 3.1E-137 T 22-04-2016 SMGD1_RS13985 00e23ba8060a90b617e52cef9f094b42 349 Pfam PF01761 3-dehydroquinate synthase 59 312 3.9E-101 T 22-04-2016 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 SMGD1_RS13985 00e23ba8060a90b617e52cef9f094b42 349 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 1 345 39.104 T 22-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 SMGD1_RS13985 00e23ba8060a90b617e52cef9f094b42 349 SUPERFAMILY SSF56796 23 344 1.1E-99 T 22-04-2016 SMGD1_RS13985 00e23ba8060a90b617e52cef9f094b42 349 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 339 9.4E-111 T 22-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 SMGD1_RS03760 366bf306ad04e00b55ed5a8cbe4cc3e8 215 PANTHER PTHR21343:SF0 1 169 2.1E-38 T 22-04-2016 SMGD1_RS03760 366bf306ad04e00b55ed5a8cbe4cc3e8 215 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 6 169 5.0E-36 T 22-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 SMGD1_RS03760 366bf306ad04e00b55ed5a8cbe4cc3e8 215 Gene3D G3DSA:3.40.50.300 1 200 1.1E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS03760 366bf306ad04e00b55ed5a8cbe4cc3e8 215 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 2 197 20.921 T 22-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 SMGD1_RS03760 366bf306ad04e00b55ed5a8cbe4cc3e8 215 SUPERFAMILY SSF52540 1 199 4.5E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS03760 366bf306ad04e00b55ed5a8cbe4cc3e8 215 PANTHER PTHR21343 1 169 2.1E-38 T 22-04-2016 SMGD1_RS03760 366bf306ad04e00b55ed5a8cbe4cc3e8 215 Pfam PF13500 AAA domain 4 180 1.3E-27 T 22-04-2016 SMGD1_RS12135 fa250e44e36843bc6b8a67a5222441cf 639 SMART SM00387 520 632 4.8E-16 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS12135 fa250e44e36843bc6b8a67a5222441cf 639 Gene3D G3DSA:3.40.50.2300 9 103 6.7E-6 T 22-04-2016 SMGD1_RS12135 fa250e44e36843bc6b8a67a5222441cf 639 PRINTS PR00344 Bacterial sensor protein C-terminal signature 579 589 1.0E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS12135 fa250e44e36843bc6b8a67a5222441cf 639 PRINTS PR00344 Bacterial sensor protein C-terminal signature 592 610 1.0E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS12135 fa250e44e36843bc6b8a67a5222441cf 639 PRINTS PR00344 Bacterial sensor protein C-terminal signature 616 629 1.0E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS12135 fa250e44e36843bc6b8a67a5222441cf 639 PRINTS PR00344 Bacterial sensor protein C-terminal signature 561 575 1.0E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS12135 fa250e44e36843bc6b8a67a5222441cf 639 Gene3D G3DSA:3.40.50.2300 126 244 4.1E-35 T 22-04-2016 SMGD1_RS12135 fa250e44e36843bc6b8a67a5222441cf 639 SMART SM00448 125 239 9.2E-32 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS12135 fa250e44e36843bc6b8a67a5222441cf 639 Gene3D G3DSA:3.30.450.20 253 368 5.5E-7 T 22-04-2016 SMGD1_RS12135 fa250e44e36843bc6b8a67a5222441cf 639 Gene3D G3DSA:3.30.565.10 483 632 2.6E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS12135 fa250e44e36843bc6b8a67a5222441cf 639 SUPERFAMILY SSF55785 274 378 2.86E-7 T 22-04-2016 IPR000014 PAS domain SMGD1_RS12135 fa250e44e36843bc6b8a67a5222441cf 639 PANTHER PTHR24423 255 385 4.7E-43 T 22-04-2016 SMGD1_RS12135 fa250e44e36843bc6b8a67a5222441cf 639 PANTHER PTHR24423 83 90 4.7E-43 T 22-04-2016 SMGD1_RS12135 fa250e44e36843bc6b8a67a5222441cf 639 PANTHER PTHR24423 406 634 4.7E-43 T 22-04-2016 SMGD1_RS12135 fa250e44e36843bc6b8a67a5222441cf 639 Gene3D G3DSA:1.10.287.130 405 471 1.3E-4 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS12135 fa250e44e36843bc6b8a67a5222441cf 639 Pfam PF00072 Response regulator receiver domain 127 238 3.4E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS12135 fa250e44e36843bc6b8a67a5222441cf 639 SUPERFAMILY SSF47384 405 477 4.9E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS12135 fa250e44e36843bc6b8a67a5222441cf 639 Pfam PF13426 PAS domain 269 369 7.7E-6 T 22-04-2016 IPR000014 PAS domain SMGD1_RS12135 fa250e44e36843bc6b8a67a5222441cf 639 SUPERFAMILY SSF52172 126 250 5.98E-35 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS12135 fa250e44e36843bc6b8a67a5222441cf 639 SUPERFAMILY SSF55874 480 632 2.88E-30 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS12135 fa250e44e36843bc6b8a67a5222441cf 639 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 524 629 8.1E-15 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS12135 fa250e44e36843bc6b8a67a5222441cf 639 SUPERFAMILY SSF52172 9 103 8.79E-7 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS10560 6378aa7c88c513612de2bb0fdd0435c5 127 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 16 105 3.9E-14 T 22-04-2016 IPR000014 PAS domain SMGD1_RS10560 6378aa7c88c513612de2bb0fdd0435c5 127 SUPERFAMILY SSF55785 13 105 4.01E-25 T 22-04-2016 IPR000014 PAS domain SMGD1_RS10560 6378aa7c88c513612de2bb0fdd0435c5 127 Gene3D G3DSA:3.30.450.20 12 104 2.2E-21 T 22-04-2016 SMGD1_RS10560 6378aa7c88c513612de2bb0fdd0435c5 127 PANTHER PTHR32089 1 125 3.5E-24 T 22-04-2016 SMGD1_RS10560 6378aa7c88c513612de2bb0fdd0435c5 127 PANTHER PTHR32089:SF52 1 125 3.5E-24 T 22-04-2016 SMGD1_RS10560 6378aa7c88c513612de2bb0fdd0435c5 127 Pfam PF08447 PAS fold 23 101 6.5E-16 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 SMGD1_RS11725 6c6bf7ba29278703227eb15ba101639d 301 SUPERFAMILY SSF54862 198 293 4.08E-16 T 22-04-2016 SMGD1_RS11725 6c6bf7ba29278703227eb15ba101639d 301 SUPERFAMILY SSF54862 99 150 4.08E-16 T 22-04-2016 SMGD1_RS11725 6c6bf7ba29278703227eb15ba101639d 301 Pfam PF12801 4Fe-4S binding domain 184 223 4.6E-6 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SMGD1_RS11725 6c6bf7ba29278703227eb15ba101639d 301 Pfam PF12801 4Fe-4S binding domain 89 136 2.2E-13 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SMGD1_RS11725 6c6bf7ba29278703227eb15ba101639d 301 TIGRFAM TIGR02163 napH_: ferredoxin-type protein, NapH/MauN family 32 294 4.4E-84 T 22-04-2016 IPR011886 Ferredoxin-type protein, NapH/MauN family GO:0005506 SMGD1_RS11725 6c6bf7ba29278703227eb15ba101639d 301 Gene3D G3DSA:3.30.70.20 202 293 1.1E-10 T 22-04-2016 SMGD1_RS11725 6c6bf7ba29278703227eb15ba101639d 301 PANTHER PTHR30176 10 296 3.5E-26 T 22-04-2016 SMGD1_RS05975 ff05c76abd5b240ad92d7c66dd82efa3 196 SUPERFAMILY SSF52096 11 190 1.67E-72 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SMGD1_RS05975 ff05c76abd5b240ad92d7c66dd82efa3 196 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 3 193 43.96 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SMGD1_RS05975 ff05c76abd5b240ad92d7c66dd82efa3 196 PRINTS PR00127 Clp protease catalytic subunit P signature 19 34 7.2E-54 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SMGD1_RS05975 ff05c76abd5b240ad92d7c66dd82efa3 196 PRINTS PR00127 Clp protease catalytic subunit P signature 90 107 7.2E-54 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SMGD1_RS05975 ff05c76abd5b240ad92d7c66dd82efa3 196 PRINTS PR00127 Clp protease catalytic subunit P signature 168 187 7.2E-54 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SMGD1_RS05975 ff05c76abd5b240ad92d7c66dd82efa3 196 PRINTS PR00127 Clp protease catalytic subunit P signature 59 79 7.2E-54 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SMGD1_RS05975 ff05c76abd5b240ad92d7c66dd82efa3 196 PRINTS PR00127 Clp protease catalytic subunit P signature 111 130 7.2E-54 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SMGD1_RS05975 ff05c76abd5b240ad92d7c66dd82efa3 196 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 1 192 1.3E-106 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SMGD1_RS05975 ff05c76abd5b240ad92d7c66dd82efa3 196 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 112 125 - T 22-04-2016 IPR033135 ClpP, histidine active site SMGD1_RS05975 ff05c76abd5b240ad92d7c66dd82efa3 196 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 90 101 - T 22-04-2016 IPR018215 ClpP, Ser active site SMGD1_RS05975 ff05c76abd5b240ad92d7c66dd82efa3 196 Gene3D G3DSA:3.90.226.10 3 191 2.4E-89 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SMGD1_RS05975 ff05c76abd5b240ad92d7c66dd82efa3 196 Pfam PF00574 Clp protease 13 191 1.3E-87 T 22-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA SMGD1_RS05975 ff05c76abd5b240ad92d7c66dd82efa3 196 PANTHER PTHR10381 3 190 2.1E-131 T 22-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA SMGD1_RS01925 3ed7bcfd14a703b1fa50a6c99a56bbfe 363 PANTHER PTHR32332:SF18 74 361 2.0E-147 T 22-04-2016 SMGD1_RS01925 3ed7bcfd14a703b1fa50a6c99a56bbfe 363 PANTHER PTHR32332:SF18 2 50 2.0E-147 T 22-04-2016 SMGD1_RS01925 3ed7bcfd14a703b1fa50a6c99a56bbfe 363 SUPERFAMILY SSF51412 7 307 8.55E-46 T 22-04-2016 SMGD1_RS01925 3ed7bcfd14a703b1fa50a6c99a56bbfe 363 Gene3D G3DSA:3.20.20.70 10 356 2.4E-48 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMGD1_RS01925 3ed7bcfd14a703b1fa50a6c99a56bbfe 363 PANTHER PTHR32332 74 361 2.0E-147 T 22-04-2016 SMGD1_RS01925 3ed7bcfd14a703b1fa50a6c99a56bbfe 363 PANTHER PTHR32332 2 50 2.0E-147 T 22-04-2016 SMGD1_RS01925 3ed7bcfd14a703b1fa50a6c99a56bbfe 363 Pfam PF03060 Nitronate monooxygenase 5 361 1.1E-88 T 22-04-2016 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 SMGD1_RS13110 94d50f0d79f0bf30a47ed65648247dcd 1168 SUPERFAMILY SSF55874 847 1014 5.63E-45 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS13110 94d50f0d79f0bf30a47ed65648247dcd 1168 PANTHER PTHR24423 172 212 2.8E-126 T 22-04-2016 SMGD1_RS13110 94d50f0d79f0bf30a47ed65648247dcd 1168 PANTHER PTHR24423 10 25 2.8E-126 T 22-04-2016 SMGD1_RS13110 94d50f0d79f0bf30a47ed65648247dcd 1168 PANTHER PTHR24423 769 1166 2.8E-126 T 22-04-2016 SMGD1_RS13110 94d50f0d79f0bf30a47ed65648247dcd 1168 SMART SM00387 903 1014 5.5E-38 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS13110 94d50f0d79f0bf30a47ed65648247dcd 1168 SUPERFAMILY SSF103190 228 313 1.8E-15 T 22-04-2016 IPR029151 Periplasmic sensor domain-like SMGD1_RS13110 94d50f0d79f0bf30a47ed65648247dcd 1168 Gene3D G3DSA:3.40.50.2300 1046 1166 4.4E-38 T 22-04-2016 SMGD1_RS13110 94d50f0d79f0bf30a47ed65648247dcd 1168 Gene3D G3DSA:1.10.287.130 781 854 1.2E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS13110 94d50f0d79f0bf30a47ed65648247dcd 1168 SUPERFAMILY SSF47384 777 860 2.35E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS13110 94d50f0d79f0bf30a47ed65648247dcd 1168 SUPERFAMILY SSF55781 563 709 7.85E-16 T 22-04-2016 IPR029016 GAF domain-like SMGD1_RS13110 94d50f0d79f0bf30a47ed65648247dcd 1168 SMART SM00448 1048 1163 5.0E-33 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS13110 94d50f0d79f0bf30a47ed65648247dcd 1168 SMART SM00388 790 858 8.6E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS13110 94d50f0d79f0bf30a47ed65648247dcd 1168 Gene3D G3DSA:3.30.450.20 88 216 7.7E-31 T 22-04-2016 SMGD1_RS13110 94d50f0d79f0bf30a47ed65648247dcd 1168 Pfam PF00072 Response regulator receiver domain 1050 1163 2.3E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS13110 94d50f0d79f0bf30a47ed65648247dcd 1168 Pfam PF02743 Cache domain 39 307 1.9E-21 T 22-04-2016 IPR033479 Double Cache domain 1 SMGD1_RS13110 94d50f0d79f0bf30a47ed65648247dcd 1168 Gene3D G3DSA:3.30.450.40 568 709 9.3E-15 T 22-04-2016 IPR029016 GAF domain-like SMGD1_RS13110 94d50f0d79f0bf30a47ed65648247dcd 1168 Pfam PF00512 His Kinase A (phospho-acceptor) domain 791 858 2.6E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS13110 94d50f0d79f0bf30a47ed65648247dcd 1168 Gene3D G3DSA:3.30.565.10 859 1019 1.4E-45 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS13110 94d50f0d79f0bf30a47ed65648247dcd 1168 SUPERFAMILY SSF52172 1046 1166 1.04E-34 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS13110 94d50f0d79f0bf30a47ed65648247dcd 1168 SMART SM00304 426 483 51.0 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SMGD1_RS13110 94d50f0d79f0bf30a47ed65648247dcd 1168 SMART SM00304 345 398 4.5 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SMGD1_RS13110 94d50f0d79f0bf30a47ed65648247dcd 1168 SMART SM00304 504 557 15.0 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SMGD1_RS13110 94d50f0d79f0bf30a47ed65648247dcd 1168 Gene3D G3DSA:3.30.450.20 229 311 1.6E-9 T 22-04-2016 SMGD1_RS13110 94d50f0d79f0bf30a47ed65648247dcd 1168 SMART SM00065 578 722 0.0016 T 22-04-2016 IPR003018 GAF domain GO:0005515 SMGD1_RS13110 94d50f0d79f0bf30a47ed65648247dcd 1168 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 904 1013 3.1E-27 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS13110 94d50f0d79f0bf30a47ed65648247dcd 1168 PRINTS PR00344 Bacterial sensor protein C-terminal signature 939 953 3.8E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS13110 94d50f0d79f0bf30a47ed65648247dcd 1168 PRINTS PR00344 Bacterial sensor protein C-terminal signature 974 992 3.8E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS13110 94d50f0d79f0bf30a47ed65648247dcd 1168 PRINTS PR00344 Bacterial sensor protein C-terminal signature 957 967 3.8E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS13110 94d50f0d79f0bf30a47ed65648247dcd 1168 PRINTS PR00344 Bacterial sensor protein C-terminal signature 998 1011 3.8E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS13110 94d50f0d79f0bf30a47ed65648247dcd 1168 SUPERFAMILY SSF103190 56 217 4.71E-35 T 22-04-2016 IPR029151 Periplasmic sensor domain-like SMGD1_RS12250 bc553b9c818e5330b5c636adb05cc2c0 514 PANTHER PTHR10799:SF774 377 506 7.8E-32 T 22-04-2016 SMGD1_RS12250 bc553b9c818e5330b5c636adb05cc2c0 514 PANTHER PTHR10799:SF774 12 64 7.8E-32 T 22-04-2016 SMGD1_RS12250 bc553b9c818e5330b5c636adb05cc2c0 514 Gene3D G3DSA:3.30.450.20 210 331 8.6E-26 T 22-04-2016 SMGD1_RS12250 bc553b9c818e5330b5c636adb05cc2c0 514 Pfam PF00990 Diguanylate cyclase, GGDEF domain 344 506 3.2E-47 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS12250 bc553b9c818e5330b5c636adb05cc2c0 514 SMART SM00267 333 510 5.1E-63 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS12250 bc553b9c818e5330b5c636adb05cc2c0 514 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 216 339 3.7E-25 T 22-04-2016 IPR000014 PAS domain SMGD1_RS12250 bc553b9c818e5330b5c636adb05cc2c0 514 SUPERFAMILY SSF55073 349 510 1.88E-48 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS12250 bc553b9c818e5330b5c636adb05cc2c0 514 SUPERFAMILY SSF55785 223 335 5.15E-26 T 22-04-2016 IPR000014 PAS domain SMGD1_RS12250 bc553b9c818e5330b5c636adb05cc2c0 514 SMART SM00086 291 333 7.1E-9 T 22-04-2016 IPR001610 PAC motif SMGD1_RS12250 bc553b9c818e5330b5c636adb05cc2c0 514 SMART SM00091 218 284 2.3E-9 T 22-04-2016 IPR000014 PAS domain SMGD1_RS12250 bc553b9c818e5330b5c636adb05cc2c0 514 Gene3D G3DSA:3.30.70.270 346 511 5.6E-54 T 22-04-2016 SMGD1_RS12250 bc553b9c818e5330b5c636adb05cc2c0 514 Pfam PF13426 PAS domain 229 331 4.9E-14 T 22-04-2016 IPR000014 PAS domain SMGD1_RS12250 bc553b9c818e5330b5c636adb05cc2c0 514 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 340 509 1.4E-47 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS12250 bc553b9c818e5330b5c636adb05cc2c0 514 PANTHER PTHR10799 377 506 7.8E-32 T 22-04-2016 SMGD1_RS12250 bc553b9c818e5330b5c636adb05cc2c0 514 PANTHER PTHR10799 12 64 7.8E-32 T 22-04-2016 SMGD1_RS12890 e89eb03e7d1179a30cfc449ee01b9ae5 760 SUPERFAMILY SSF141868 512 757 3.53E-78 T 22-04-2016 IPR001633 EAL domain SMGD1_RS12890 e89eb03e7d1179a30cfc449ee01b9ae5 760 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 338 492 8.7E-39 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS12890 e89eb03e7d1179a30cfc449ee01b9ae5 760 Gene3D G3DSA:3.30.70.270 340 501 1.3E-49 T 22-04-2016 SMGD1_RS12890 e89eb03e7d1179a30cfc449ee01b9ae5 760 SMART SM00267 328 495 1.7E-51 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS12890 e89eb03e7d1179a30cfc449ee01b9ae5 760 SUPERFAMILY SSF55073 344 495 3.92E-43 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS12890 e89eb03e7d1179a30cfc449ee01b9ae5 760 PANTHER PTHR33121:SF13 456 759 2.0E-65 T 22-04-2016 SMGD1_RS12890 e89eb03e7d1179a30cfc449ee01b9ae5 760 Pfam PF00563 EAL domain 512 745 6.9E-66 T 22-04-2016 IPR001633 EAL domain SMGD1_RS12890 e89eb03e7d1179a30cfc449ee01b9ae5 760 Pfam PF00990 Diguanylate cyclase, GGDEF domain 340 490 1.6E-41 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS12890 e89eb03e7d1179a30cfc449ee01b9ae5 760 Gene3D G3DSA:3.20.20.450 509 758 2.9E-83 T 22-04-2016 IPR001633 EAL domain SMGD1_RS12890 e89eb03e7d1179a30cfc449ee01b9ae5 760 PANTHER PTHR33121 456 759 2.0E-65 T 22-04-2016 SMGD1_RS12890 e89eb03e7d1179a30cfc449ee01b9ae5 760 Gene3D G3DSA:3.30.450.20 77 178 9.0E-9 T 22-04-2016 SMGD1_RS12890 e89eb03e7d1179a30cfc449ee01b9ae5 760 SMART SM00052 505 750 2.9E-97 T 22-04-2016 IPR001633 EAL domain SMGD1_RS01090 83d61aab710f750d010f372221d1fd1d 387 SMART SM00388 158 228 3.0E-4 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS01090 83d61aab710f750d010f372221d1fd1d 387 Gene3D G3DSA:3.30.565.10 231 380 4.4E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS01090 83d61aab710f750d010f372221d1fd1d 387 Gene3D G3DSA:1.10.287.130 156 222 1.1E-4 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS01090 83d61aab710f750d010f372221d1fd1d 387 SUPERFAMILY SSF55874 228 380 3.93E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS01090 83d61aab710f750d010f372221d1fd1d 387 SUPERFAMILY SSF47384 153 224 2.16E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS01090 83d61aab710f750d010f372221d1fd1d 387 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 271 379 6.7E-15 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS01090 83d61aab710f750d010f372221d1fd1d 387 PANTHER PTHR24423:SF485 133 380 4.1E-35 T 22-04-2016 SMGD1_RS01090 83d61aab710f750d010f372221d1fd1d 387 SMART SM00387 268 382 4.4E-16 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS01090 83d61aab710f750d010f372221d1fd1d 387 PRINTS PR00344 Bacterial sensor protein C-terminal signature 366 379 1.8E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS01090 83d61aab710f750d010f372221d1fd1d 387 PRINTS PR00344 Bacterial sensor protein C-terminal signature 329 339 1.8E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS01090 83d61aab710f750d010f372221d1fd1d 387 PRINTS PR00344 Bacterial sensor protein C-terminal signature 311 325 1.8E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS01090 83d61aab710f750d010f372221d1fd1d 387 PRINTS PR00344 Bacterial sensor protein C-terminal signature 342 360 1.8E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS01090 83d61aab710f750d010f372221d1fd1d 387 PANTHER PTHR24423 133 380 4.1E-35 T 22-04-2016 SMGD1_RS11825 f11923cfbd90d00e7f2e0a534ad6de33 479 PANTHER PTHR11819 11 473 2.8E-59 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 SMGD1_RS11825 f11923cfbd90d00e7f2e0a534ad6de33 479 Pfam PF00474 Sodium:solute symporter family 41 438 1.5E-46 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 SMGD1_RS11015 f2fbd43dc94f4cab154bf3dd9155ff23 343 SUPERFAMILY SSF52402 1 235 3.09E-46 T 22-04-2016 SMGD1_RS11015 f2fbd43dc94f4cab154bf3dd9155ff23 343 Gene3D G3DSA:3.40.50.620 2 201 6.8E-66 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMGD1_RS11015 f2fbd43dc94f4cab154bf3dd9155ff23 343 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 5 340 3.3E-103 T 22-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 SMGD1_RS11015 f2fbd43dc94f4cab154bf3dd9155ff23 343 Gene3D G3DSA:2.30.30.280 208 264 3.2E-17 T 22-04-2016 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 SMGD1_RS11015 f2fbd43dc94f4cab154bf3dd9155ff23 343 Gene3D G3DSA:2.40.30.10 268 342 8.9E-20 T 22-04-2016 SMGD1_RS11015 f2fbd43dc94f4cab154bf3dd9155ff23 343 Pfam PF03054 tRNA methyl transferase 5 340 4.2E-104 T 22-04-2016 SMGD1_RS11015 f2fbd43dc94f4cab154bf3dd9155ff23 343 PANTHER PTHR11933:SF10 1 340 1.8E-117 T 22-04-2016 SMGD1_RS11015 f2fbd43dc94f4cab154bf3dd9155ff23 343 PANTHER PTHR11933 1 340 1.8E-117 T 22-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 SMGD1_RS11015 f2fbd43dc94f4cab154bf3dd9155ff23 343 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 5 341 35.624 T 22-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 SMGD1_RS01380 c37f6c88696cb3bc8834049453cb3fca 307 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 6 306 32.807 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SMGD1_RS01380 c37f6c88696cb3bc8834049453cb3fca 307 Gene3D G3DSA:3.40.50.150 212 303 8.0E-44 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS01380 c37f6c88696cb3bc8834049453cb3fca 307 Gene3D G3DSA:3.40.50.150 6 111 8.0E-44 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS01380 c37f6c88696cb3bc8834049453cb3fca 307 PANTHER PTHR11265:SF0 1 306 2.4E-109 T 22-04-2016 SMGD1_RS01380 c37f6c88696cb3bc8834049453cb3fca 307 Pfam PF01795 MraW methylase family 4 304 1.2E-101 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SMGD1_RS01380 c37f6c88696cb3bc8834049453cb3fca 307 Gene3D G3DSA:1.10.150.170 114 211 1.3E-29 T 22-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SMGD1_RS01380 c37f6c88696cb3bc8834049453cb3fca 307 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 2 304 1.9E-96 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SMGD1_RS01380 c37f6c88696cb3bc8834049453cb3fca 307 SUPERFAMILY SSF53335 5 114 3.91E-34 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS01380 c37f6c88696cb3bc8834049453cb3fca 307 SUPERFAMILY SSF53335 209 303 3.91E-34 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS01380 c37f6c88696cb3bc8834049453cb3fca 307 PANTHER PTHR11265 1 306 2.4E-109 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SMGD1_RS01380 c37f6c88696cb3bc8834049453cb3fca 307 PIRSF PIRSF004486 1 307 2.6E-97 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SMGD1_RS01380 c37f6c88696cb3bc8834049453cb3fca 307 SUPERFAMILY SSF81799 114 208 3.01E-26 T 22-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SMGD1_RS04660 f7ae9872076e0c57d31609ccd1a581e6 91 Pfam PF01106 NifU-like domain 13 77 2.4E-23 T 22-04-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 SMGD1_RS04660 f7ae9872076e0c57d31609ccd1a581e6 91 PANTHER PTHR11178:SF15 7 71 1.9E-16 T 22-04-2016 SMGD1_RS04660 f7ae9872076e0c57d31609ccd1a581e6 91 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 18 80 2.0E-26 T 22-04-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 SMGD1_RS04660 f7ae9872076e0c57d31609ccd1a581e6 91 PANTHER PTHR11178 7 71 1.9E-16 T 22-04-2016 SMGD1_RS04660 f7ae9872076e0c57d31609ccd1a581e6 91 SUPERFAMILY SSF117916 3 83 1.31E-23 T 22-04-2016 SMGD1_RS11360 ec73a0816c4dd88931b371911de03bd6 211 Gene3D G3DSA:3.30.930.10 3 160 7.4E-34 T 22-04-2016 SMGD1_RS11360 ec73a0816c4dd88931b371911de03bd6 211 PANTHER PTHR12835 4 157 1.1E-23 T 22-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 SMGD1_RS11360 ec73a0816c4dd88931b371911de03bd6 211 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 5 188 6.6E-36 T 22-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 SMGD1_RS11360 ec73a0816c4dd88931b371911de03bd6 211 Pfam PF03099 Biotin/lipoate A/B protein ligase family 9 119 1.5E-13 T 22-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 SMGD1_RS11360 ec73a0816c4dd88931b371911de03bd6 211 SUPERFAMILY SSF55681 3 161 5.61E-35 T 22-04-2016 SMGD1_RS05435 eff31c0129dd609c5c488ef77e37e09e 462 PRINTS PR00987 Glutamyl-tRNA synthetase signature 19 30 3.7E-25 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 SMGD1_RS05435 eff31c0129dd609c5c488ef77e37e09e 462 PRINTS PR00987 Glutamyl-tRNA synthetase signature 5 17 3.7E-25 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 SMGD1_RS05435 eff31c0129dd609c5c488ef77e37e09e 462 PRINTS PR00987 Glutamyl-tRNA synthetase signature 195 203 3.7E-25 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 SMGD1_RS05435 eff31c0129dd609c5c488ef77e37e09e 462 PRINTS PR00987 Glutamyl-tRNA synthetase signature 179 189 3.7E-25 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 SMGD1_RS05435 eff31c0129dd609c5c488ef77e37e09e 462 PRINTS PR00987 Glutamyl-tRNA synthetase signature 34 47 3.7E-25 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 SMGD1_RS05435 eff31c0129dd609c5c488ef77e37e09e 462 Gene3D G3DSA:3.90.800.10 67 180 3.1E-31 T 22-04-2016 SMGD1_RS05435 eff31c0129dd609c5c488ef77e37e09e 462 Hamap MF_00022_B Glutamate--tRNA ligase [gltX]. 2 458 31.734 T 22-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 SMGD1_RS05435 eff31c0129dd609c5c488ef77e37e09e 462 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 8 19 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMGD1_RS05435 eff31c0129dd609c5c488ef77e37e09e 462 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 2 458 1.4E-171 T 22-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 SMGD1_RS05435 eff31c0129dd609c5c488ef77e37e09e 462 PANTHER PTHR11451:SF41 407 462 3.7E-91 T 22-04-2016 SMGD1_RS05435 eff31c0129dd609c5c488ef77e37e09e 462 PANTHER PTHR11451:SF41 2 310 3.7E-91 T 22-04-2016 SMGD1_RS05435 eff31c0129dd609c5c488ef77e37e09e 462 SUPERFAMILY SSF48163 299 458 7.06E-36 T 22-04-2016 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 SMGD1_RS05435 eff31c0129dd609c5c488ef77e37e09e 462 Gene3D G3DSA:3.40.50.620 181 230 6.7E-51 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMGD1_RS05435 eff31c0129dd609c5c488ef77e37e09e 462 Gene3D G3DSA:3.40.50.620 2 66 6.7E-51 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMGD1_RS05435 eff31c0129dd609c5c488ef77e37e09e 462 Gene3D G3DSA:1.10.1160.10 233 314 7.5E-35 T 22-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 SMGD1_RS05435 eff31c0129dd609c5c488ef77e37e09e 462 PANTHER PTHR11451 407 462 3.7E-91 T 22-04-2016 SMGD1_RS05435 eff31c0129dd609c5c488ef77e37e09e 462 PANTHER PTHR11451 2 310 3.7E-91 T 22-04-2016 SMGD1_RS05435 eff31c0129dd609c5c488ef77e37e09e 462 Gene3D G3DSA:1.10.10.350 361 458 4.5E-23 T 22-04-2016 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 SMGD1_RS05435 eff31c0129dd609c5c488ef77e37e09e 462 SUPERFAMILY SSF52374 1 296 2.09E-106 T 22-04-2016 SMGD1_RS05435 eff31c0129dd609c5c488ef77e37e09e 462 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 2 305 5.2E-105 T 22-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 SMGD1_RS10115 1fcac7ce16caa29e29efa839ae67d7e6 1175 Pfam PF00989 PAS fold 415 523 1.2E-8 T 22-04-2016 IPR013767 PAS fold GO:0006355 SMGD1_RS10115 1fcac7ce16caa29e29efa839ae67d7e6 1175 Gene3D G3DSA:3.40.50.2300 920 1038 3.2E-40 T 22-04-2016 SMGD1_RS10115 1fcac7ce16caa29e29efa839ae67d7e6 1175 SUPERFAMILY SSF55785 399 524 4.19E-13 T 22-04-2016 IPR000014 PAS domain SMGD1_RS10115 1fcac7ce16caa29e29efa839ae67d7e6 1175 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 289 407 2.1E-15 T 22-04-2016 IPR000014 PAS domain SMGD1_RS10115 1fcac7ce16caa29e29efa839ae67d7e6 1175 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 411 530 5.9E-11 T 22-04-2016 IPR000014 PAS domain SMGD1_RS10115 1fcac7ce16caa29e29efa839ae67d7e6 1175 Gene3D G3DSA:1.10.287.130 553 596 4.8E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS10115 1fcac7ce16caa29e29efa839ae67d7e6 1175 SMART SM00387 658 774 1.5E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS10115 1fcac7ce16caa29e29efa839ae67d7e6 1175 PRINTS PR00344 Bacterial sensor protein C-terminal signature 758 771 8.9E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS10115 1fcac7ce16caa29e29efa839ae67d7e6 1175 PRINTS PR00344 Bacterial sensor protein C-terminal signature 734 752 8.9E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS10115 1fcac7ce16caa29e29efa839ae67d7e6 1175 PRINTS PR00344 Bacterial sensor protein C-terminal signature 699 713 8.9E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS10115 1fcac7ce16caa29e29efa839ae67d7e6 1175 PRINTS PR00344 Bacterial sensor protein C-terminal signature 717 727 8.9E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS10115 1fcac7ce16caa29e29efa839ae67d7e6 1175 Gene3D G3DSA:1.20.120.160 1077 1169 4.3E-16 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SMGD1_RS10115 1fcac7ce16caa29e29efa839ae67d7e6 1175 Gene3D G3DSA:3.30.565.10 597 775 1.9E-46 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS10115 1fcac7ce16caa29e29efa839ae67d7e6 1175 SUPERFAMILY SSF47226 1015 1028 4.84E-16 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SMGD1_RS10115 1fcac7ce16caa29e29efa839ae67d7e6 1175 SUPERFAMILY SSF47226 1065 1161 4.84E-16 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SMGD1_RS10115 1fcac7ce16caa29e29efa839ae67d7e6 1175 SMART SM00388 546 611 9.9E-21 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS10115 1fcac7ce16caa29e29efa839ae67d7e6 1175 SUPERFAMILY SSF55785 298 397 9.07E-28 T 22-04-2016 IPR000014 PAS domain SMGD1_RS10115 1fcac7ce16caa29e29efa839ae67d7e6 1175 SMART SM00091 287 357 0.0012 T 22-04-2016 IPR000014 PAS domain SMGD1_RS10115 1fcac7ce16caa29e29efa839ae67d7e6 1175 SMART SM00091 413 479 5.6E-4 T 22-04-2016 IPR000014 PAS domain SMGD1_RS10115 1fcac7ce16caa29e29efa839ae67d7e6 1175 SUPERFAMILY SSF52172 920 1044 1.85E-36 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS10115 1fcac7ce16caa29e29efa839ae67d7e6 1175 Pfam PF00072 Response regulator receiver domain 922 1032 2.0E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS10115 1fcac7ce16caa29e29efa839ae67d7e6 1175 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 658 773 8.9E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS10115 1fcac7ce16caa29e29efa839ae67d7e6 1175 PANTHER PTHR24423 919 1075 3.5E-180 T 22-04-2016 SMGD1_RS10115 1fcac7ce16caa29e29efa839ae67d7e6 1175 PANTHER PTHR24423 266 894 3.5E-180 T 22-04-2016 SMGD1_RS10115 1fcac7ce16caa29e29efa839ae67d7e6 1175 SUPERFAMILY SSF55874 600 774 5.89E-46 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS10115 1fcac7ce16caa29e29efa839ae67d7e6 1175 SMART SM00086 486 526 1.4 T 22-04-2016 IPR001610 PAC motif SMGD1_RS10115 1fcac7ce16caa29e29efa839ae67d7e6 1175 SMART SM00086 359 401 2.3E-7 T 22-04-2016 IPR001610 PAC motif SMGD1_RS10115 1fcac7ce16caa29e29efa839ae67d7e6 1175 Pfam PF01627 Hpt domain 1087 1142 9.0E-7 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SMGD1_RS10115 1fcac7ce16caa29e29efa839ae67d7e6 1175 Pfam PF13426 PAS domain 300 400 7.1E-15 T 22-04-2016 IPR000014 PAS domain SMGD1_RS10115 1fcac7ce16caa29e29efa839ae67d7e6 1175 Pfam PF00512 His Kinase A (phospho-acceptor) domain 547 611 1.1E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS10115 1fcac7ce16caa29e29efa839ae67d7e6 1175 SMART SM00448 920 1032 2.3E-34 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS10115 1fcac7ce16caa29e29efa839ae67d7e6 1175 Gene3D G3DSA:3.30.450.20 299 399 3.0E-25 T 22-04-2016 SMGD1_RS10115 1fcac7ce16caa29e29efa839ae67d7e6 1175 SUPERFAMILY SSF47384 531 612 3.34E-21 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS10115 1fcac7ce16caa29e29efa839ae67d7e6 1175 Gene3D G3DSA:3.30.450.20 414 552 7.3E-17 T 22-04-2016 SMGD1_RS06360 cd35a0561ee787f9c14ed74762e72e23 597 SMART SM00267 436 596 1.5E-6 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS06360 cd35a0561ee787f9c14ed74762e72e23 597 Gene3D G3DSA:3.30.70.270 449 591 6.5E-13 T 22-04-2016 SMGD1_RS06360 cd35a0561ee787f9c14ed74762e72e23 597 PANTHER PTHR10110 3 264 1.9E-23 T 22-04-2016 IPR018422 Cation/H+ exchanger, CPA1 family GO:0006812|GO:0015299|GO:0016021 Reactome: REACT_15518 SMGD1_RS06360 cd35a0561ee787f9c14ed74762e72e23 597 PANTHER PTHR10110 297 402 1.9E-23 T 22-04-2016 IPR018422 Cation/H+ exchanger, CPA1 family GO:0006812|GO:0015299|GO:0016021 Reactome: REACT_15518 SMGD1_RS06360 cd35a0561ee787f9c14ed74762e72e23 597 SUPERFAMILY SSF55073 453 590 4.47E-14 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS06360 cd35a0561ee787f9c14ed74762e72e23 597 Pfam PF00990 Diguanylate cyclase, GGDEF domain 450 582 1.3E-8 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS06360 cd35a0561ee787f9c14ed74762e72e23 597 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 449 555 2.7E-13 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS06360 cd35a0561ee787f9c14ed74762e72e23 597 PANTHER PTHR10110:SF86 3 264 1.9E-23 T 22-04-2016 SMGD1_RS06360 cd35a0561ee787f9c14ed74762e72e23 597 PANTHER PTHR10110:SF86 297 402 1.9E-23 T 22-04-2016 SMGD1_RS06360 cd35a0561ee787f9c14ed74762e72e23 597 Pfam PF00999 Sodium/hydrogen exchanger family 5 409 2.4E-30 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 SMGD1_RS08725 3626eaf96d63134d8e42910820f83293 331 Gene3D G3DSA:3.40.50.300 5 152 3.8E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS08725 3626eaf96d63134d8e42910820f83293 331 PANTHER PTHR13779 6 183 1.4E-50 T 22-04-2016 SMGD1_RS08725 3626eaf96d63134d8e42910820f83293 331 PANTHER PTHR13779:SF23 6 183 1.4E-50 T 22-04-2016 SMGD1_RS08725 3626eaf96d63134d8e42910820f83293 331 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 22 148 8.6E-8 T 22-04-2016 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 SMGD1_RS08725 3626eaf96d63134d8e42910820f83293 331 SUPERFAMILY SSF52540 5 173 6.97E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS06770 77fcbed97c9ac106f17dfa0b61d76dd7 254 PANTHER PTHR13773 11 250 2.7E-37 T 22-04-2016 SMGD1_RS06770 77fcbed97c9ac106f17dfa0b61d76dd7 254 PANTHER PTHR13773:SF0 11 250 2.7E-37 T 22-04-2016 SMGD1_RS06770 77fcbed97c9ac106f17dfa0b61d76dd7 254 Pfam PF01148 Cytidylyltransferase family 11 250 1.4E-45 T 22-04-2016 SMGD1_RS12030 b6d20bcee3974b012731b051e9f8511a 848 SUPERFAMILY SSF52922 744 841 1.88E-9 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 SMGD1_RS12030 b6d20bcee3974b012731b051e9f8511a 848 TIGRFAM TIGR03710 OAFO_sf: 2-oxoacid:acceptor oxidoreductase, alpha subunit 295 838 1.2E-169 T 22-04-2016 IPR022367 2-oxoacid:acceptor oxidoreductase, alpha subunit KEGG: 00020+1.2.7.3|KEGG: 00720+1.2.7.3|MetaCyc: PWY-5392|MetaCyc: PWY-6969|UniPathway: UPA00223 SMGD1_RS12030 b6d20bcee3974b012731b051e9f8511a 848 SMART SM01117 1 73 5.0E-10 T 22-04-2016 IPR001199 Cytochrome b5-like heme/steroid binding domain SMGD1_RS12030 b6d20bcee3974b012731b051e9f8511a 848 Gene3D G3DSA:3.40.50.970 472 664 1.8E-66 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SMGD1_RS12030 b6d20bcee3974b012731b051e9f8511a 848 SUPERFAMILY SSF52518 479 729 1.12E-59 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SMGD1_RS12030 b6d20bcee3974b012731b051e9f8511a 848 Gene3D G3DSA:3.40.50.920 745 805 8.3E-7 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 SMGD1_RS12030 b6d20bcee3974b012731b051e9f8511a 848 Gene3D G3DSA:3.40.920.10 295 459 2.0E-24 T 22-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 SMGD1_RS12030 b6d20bcee3974b012731b051e9f8511a 848 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 303 454 6.4E-24 T 22-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 SMGD1_RS12030 b6d20bcee3974b012731b051e9f8511a 848 SUPERFAMILY SSF53323 296 499 3.92E-25 T 22-04-2016 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 SMGD1_RS12030 b6d20bcee3974b012731b051e9f8511a 848 Pfam PF00173 Cytochrome b5-like Heme/Steroid binding domain 2 66 5.4E-7 T 22-04-2016 IPR001199 Cytochrome b5-like heme/steroid binding domain SMGD1_RS12030 b6d20bcee3974b012731b051e9f8511a 848 SUPERFAMILY SSF55856 1 63 3.53E-11 T 22-04-2016 IPR001199 Cytochrome b5-like heme/steroid binding domain SMGD1_RS12030 b6d20bcee3974b012731b051e9f8511a 848 PANTHER PTHR32154:SF20 686 844 4.1E-168 T 22-04-2016 SMGD1_RS12030 b6d20bcee3974b012731b051e9f8511a 848 PANTHER PTHR32154:SF20 178 660 4.1E-168 T 22-04-2016 SMGD1_RS12030 b6d20bcee3974b012731b051e9f8511a 848 Gene3D G3DSA:3.10.120.10 1 98 2.8E-13 T 22-04-2016 IPR001199 Cytochrome b5-like heme/steroid binding domain SMGD1_RS12030 b6d20bcee3974b012731b051e9f8511a 848 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 493 723 5.4E-51 T 22-04-2016 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 SMGD1_RS12030 b6d20bcee3974b012731b051e9f8511a 848 PANTHER PTHR32154 686 844 4.1E-168 T 22-04-2016 SMGD1_RS12030 b6d20bcee3974b012731b051e9f8511a 848 PANTHER PTHR32154 178 660 4.1E-168 T 22-04-2016 SMGD1_RS01720 cda59a49810c72862a05d890d51c9314 273 PANTHER PTHR30176:SF2 1 263 5.4E-44 T 22-04-2016 SMGD1_RS01720 cda59a49810c72862a05d890d51c9314 273 Pfam PF12801 4Fe-4S binding domain 168 201 4.1E-5 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SMGD1_RS01720 cda59a49810c72862a05d890d51c9314 273 Pfam PF12801 4Fe-4S binding domain 71 113 2.5E-13 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SMGD1_RS01720 cda59a49810c72862a05d890d51c9314 273 TIGRFAM TIGR02163 napH_: ferredoxin-type protein, NapH/MauN family 10 263 2.7E-86 T 22-04-2016 IPR011886 Ferredoxin-type protein, NapH/MauN family GO:0005506 SMGD1_RS01720 cda59a49810c72862a05d890d51c9314 273 Pfam PF13237 4Fe-4S dicluster domain 207 255 1.4E-5 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SMGD1_RS01720 cda59a49810c72862a05d890d51c9314 273 SUPERFAMILY SSF54862 79 101 5.23E-18 T 22-04-2016 SMGD1_RS01720 cda59a49810c72862a05d890d51c9314 273 SUPERFAMILY SSF54862 148 262 5.23E-18 T 22-04-2016 SMGD1_RS01720 cda59a49810c72862a05d890d51c9314 273 PANTHER PTHR30176 1 263 5.4E-44 T 22-04-2016 SMGD1_RS01720 cda59a49810c72862a05d890d51c9314 273 Gene3D G3DSA:3.30.70.20 180 262 4.1E-13 T 22-04-2016 SMGD1_RS01720 cda59a49810c72862a05d890d51c9314 273 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 245 256 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SMGD1_RS03125 6ccaba734265a8e8464b94b413874c10 842 SUPERFAMILY SSF47384 614 684 6.67E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS03125 6ccaba734265a8e8464b94b413874c10 842 Gene3D G3DSA:3.30.565.10 695 840 5.8E-30 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS03125 6ccaba734265a8e8464b94b413874c10 842 SUPERFAMILY SSF53850 337 554 1.42E-35 T 22-04-2016 SMGD1_RS03125 6ccaba734265a8e8464b94b413874c10 842 Pfam PF09084 NMT1/THI5 like 37 243 2.4E-47 T 22-04-2016 IPR015168 SsuA/THI5-like SMGD1_RS03125 6ccaba734265a8e8464b94b413874c10 842 Gene3D G3DSA:3.40.190.10 333 412 8.6E-18 T 22-04-2016 SMGD1_RS03125 6ccaba734265a8e8464b94b413874c10 842 Gene3D G3DSA:3.40.190.10 515 555 8.6E-18 T 22-04-2016 SMGD1_RS03125 6ccaba734265a8e8464b94b413874c10 842 SMART SM00387 729 841 9.1E-16 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS03125 6ccaba734265a8e8464b94b413874c10 842 PRINTS PR00344 Bacterial sensor protein C-terminal signature 801 819 1.6E-7 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS03125 6ccaba734265a8e8464b94b413874c10 842 PRINTS PR00344 Bacterial sensor protein C-terminal signature 788 798 1.6E-7 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS03125 6ccaba734265a8e8464b94b413874c10 842 PRINTS PR00344 Bacterial sensor protein C-terminal signature 825 838 1.6E-7 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS03125 6ccaba734265a8e8464b94b413874c10 842 PRINTS PR00344 Bacterial sensor protein C-terminal signature 770 784 1.6E-7 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS03125 6ccaba734265a8e8464b94b413874c10 842 SMART SM00062 336 555 5.9E-20 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SMGD1_RS03125 6ccaba734265a8e8464b94b413874c10 842 PANTHER PTHR31528 7 328 1.3E-47 T 22-04-2016 IPR027939 NMT1/THI5 family GO:0009228 UniPathway: UPA00060 SMGD1_RS03125 6ccaba734265a8e8464b94b413874c10 842 Gene3D G3DSA:3.40.190.10 413 501 7.5E-7 T 22-04-2016 SMGD1_RS03125 6ccaba734265a8e8464b94b413874c10 842 Gene3D G3DSA:3.40.190.10 115 187 8.9E-8 T 22-04-2016 SMGD1_RS03125 6ccaba734265a8e8464b94b413874c10 842 SUPERFAMILY SSF53850 26 257 1.96E-28 T 22-04-2016 SMGD1_RS03125 6ccaba734265a8e8464b94b413874c10 842 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 730 839 3.0E-15 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS03125 6ccaba734265a8e8464b94b413874c10 842 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 337 553 2.4E-28 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SMGD1_RS03125 6ccaba734265a8e8464b94b413874c10 842 SUPERFAMILY SSF55874 692 839 5.5E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS03380 f64213d24b4bc4ffe3828e630926015e 126 Gene3D G3DSA:1.10.260.40 8 60 2.4E-5 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SMGD1_RS03380 f64213d24b4bc4ffe3828e630926015e 126 Pfam PF01381 Helix-turn-helix 12 61 2.6E-6 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SMGD1_RS03380 f64213d24b4bc4ffe3828e630926015e 126 SUPERFAMILY SSF47413 7 60 9.19E-6 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SMGD1_RS03925 26f9ec802d06c1a18b058a71f02ca96c 196 Gene3D G3DSA:3.20.10.10 79 182 2.8E-32 T 22-04-2016 SMGD1_RS03925 26f9ec802d06c1a18b058a71f02ca96c 196 SUPERFAMILY SSF56752 7 182 5.1E-25 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 SMGD1_RS03925 26f9ec802d06c1a18b058a71f02ca96c 196 Pfam PF01063 Amino-transferase class IV 7 183 1.2E-13 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 SMGD1_RS03925 26f9ec802d06c1a18b058a71f02ca96c 196 Gene3D G3DSA:3.30.470.10 5 74 2.0E-18 T 22-04-2016 SMGD1_RS00570 eb6406e2aacacb760d7909b489193fda 529 PANTHER PTHR24423 47 86 4.0E-36 T 22-04-2016 SMGD1_RS00570 eb6406e2aacacb760d7909b489193fda 529 PANTHER PTHR24423 10 15 4.0E-36 T 22-04-2016 SMGD1_RS00570 eb6406e2aacacb760d7909b489193fda 529 PANTHER PTHR24423 261 529 4.0E-36 T 22-04-2016 SMGD1_RS00570 eb6406e2aacacb760d7909b489193fda 529 SUPERFAMILY SSF47384 290 364 4.32E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS00570 eb6406e2aacacb760d7909b489193fda 529 SMART SM00388 295 365 3.8E-4 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS00570 eb6406e2aacacb760d7909b489193fda 529 SUPERFAMILY SSF55874 362 523 3.27E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS00570 eb6406e2aacacb760d7909b489193fda 529 SMART SM00387 405 525 2.1E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS00570 eb6406e2aacacb760d7909b489193fda 529 Gene3D G3DSA:3.30.565.10 366 523 4.2E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS00570 eb6406e2aacacb760d7909b489193fda 529 PRINTS PR00344 Bacterial sensor protein C-terminal signature 445 459 1.9E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS00570 eb6406e2aacacb760d7909b489193fda 529 PRINTS PR00344 Bacterial sensor protein C-terminal signature 476 494 1.9E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS00570 eb6406e2aacacb760d7909b489193fda 529 PRINTS PR00344 Bacterial sensor protein C-terminal signature 463 473 1.9E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS00570 eb6406e2aacacb760d7909b489193fda 529 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 409 523 3.2E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS08400 463c426795b849dcbf9c7506effb3f22 169 PANTHER PTHR11995 10 155 1.5E-89 T 22-04-2016 SMGD1_RS08400 463c426795b849dcbf9c7506effb3f22 169 SUPERFAMILY SSF56770 16 159 2.35E-64 T 22-04-2016 SMGD1_RS08400 463c426795b849dcbf9c7506effb3f22 169 Gene3D G3DSA:3.40.50.700 26 154 7.7E-31 T 22-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 SMGD1_RS08400 463c426795b849dcbf9c7506effb3f22 169 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 16 156 6.2E-73 T 22-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 SMGD1_RS08400 463c426795b849dcbf9c7506effb3f22 169 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 42 148 1.6E-22 T 22-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 SMGD1_RS08400 463c426795b849dcbf9c7506effb3f22 169 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 12 155 41.888 T 22-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 SMGD1_RS02605 0f3ce33b4f351c309a5e5aa84904a667 417 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 5 177 2.4E-37 T 22-04-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 SMGD1_RS02605 0f3ce33b4f351c309a5e5aa84904a667 417 Gene3D G3DSA:3.40.50.720 232 413 1.1E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS02605 0f3ce33b4f351c309a5e5aa84904a667 417 PANTHER PTHR11374:SF25 1 414 8.9E-227 T 22-04-2016 SMGD1_RS02605 0f3ce33b4f351c309a5e5aa84904a667 417 PIRSF PIRSF500136 1 416 4.1E-153 T 22-04-2016 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 SMGD1_RS02605 0f3ce33b4f351c309a5e5aa84904a667 417 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 317 411 7.7E-24 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 SMGD1_RS02605 0f3ce33b4f351c309a5e5aa84904a667 417 SUPERFAMILY SSF52413 302 412 1.09E-30 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 SMGD1_RS02605 0f3ce33b4f351c309a5e5aa84904a667 417 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 5 402 3.1E-124 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 SMGD1_RS02605 0f3ce33b4f351c309a5e5aa84904a667 417 SUPERFAMILY SSF51735 5 191 3.71E-48 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS02605 0f3ce33b4f351c309a5e5aa84904a667 417 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 202 290 1.2E-23 T 22-04-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 SMGD1_RS02605 0f3ce33b4f351c309a5e5aa84904a667 417 SMART SM00984 317 412 4.9E-35 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 SMGD1_RS02605 0f3ce33b4f351c309a5e5aa84904a667 417 SUPERFAMILY SSF48179 201 292 8.5E-25 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SMGD1_RS02605 0f3ce33b4f351c309a5e5aa84904a667 417 PIRSF PIRSF000124 4 416 1.8E-58 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 SMGD1_RS02605 0f3ce33b4f351c309a5e5aa84904a667 417 Gene3D G3DSA:3.40.50.720 2 222 2.8E-59 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS02605 0f3ce33b4f351c309a5e5aa84904a667 417 PANTHER PTHR11374 1 414 8.9E-227 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 SMGD1_RS04400 ea4d3c75af97bad1b64c20c140ef41fb 586 PANTHER PTHR30627 40 586 1.4E-86 T 22-04-2016 SMGD1_RS04400 ea4d3c75af97bad1b64c20c140ef41fb 586 PANTHER PTHR30627:SF1 40 586 1.4E-86 T 22-04-2016 SMGD1_RS04400 ea4d3c75af97bad1b64c20c140ef41fb 586 Pfam PF03717 Penicillin-binding Protein dimerisation domain 48 225 6.8E-15 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 SMGD1_RS04400 ea4d3c75af97bad1b64c20c140ef41fb 586 Pfam PF00905 Penicillin binding protein transpeptidase domain 269 572 2.5E-55 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 SMGD1_RS04400 ea4d3c75af97bad1b64c20c140ef41fb 586 Gene3D G3DSA:3.90.1310.10 158 250 5.4E-14 T 22-04-2016 SMGD1_RS04400 ea4d3c75af97bad1b64c20c140ef41fb 586 SUPERFAMILY SSF56519 48 241 3.4E-24 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 SMGD1_RS04400 ea4d3c75af97bad1b64c20c140ef41fb 586 Gene3D G3DSA:3.40.710.10 251 575 3.8E-67 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SMGD1_RS04400 ea4d3c75af97bad1b64c20c140ef41fb 586 SUPERFAMILY SSF56601 245 576 5.25E-68 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SMGD1_RS05670 b2a56673cbfb4b3f6cc0f08c1b4b6a50 594 SMART SM00267 166 329 7.6E-7 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS05670 b2a56673cbfb4b3f6cc0f08c1b4b6a50 594 Gene3D G3DSA:3.40.50.2300 13 150 1.7E-28 T 22-04-2016 SMGD1_RS05670 b2a56673cbfb4b3f6cc0f08c1b4b6a50 594 SUPERFAMILY SSF55073 182 322 2.2E-19 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS05670 b2a56673cbfb4b3f6cc0f08c1b4b6a50 594 PANTHER PTHR33121:SF10 327 576 1.1E-49 T 22-04-2016 SMGD1_RS05670 b2a56673cbfb4b3f6cc0f08c1b4b6a50 594 PANTHER PTHR33121 327 576 1.1E-49 T 22-04-2016 SMGD1_RS05670 b2a56673cbfb4b3f6cc0f08c1b4b6a50 594 Gene3D G3DSA:3.30.70.270 201 322 4.7E-19 T 22-04-2016 SMGD1_RS05670 b2a56673cbfb4b3f6cc0f08c1b4b6a50 594 Pfam PF00563 EAL domain 348 576 6.5E-55 T 22-04-2016 IPR001633 EAL domain SMGD1_RS05670 b2a56673cbfb4b3f6cc0f08c1b4b6a50 594 Pfam PF00990 Diguanylate cyclase, GGDEF domain 179 321 2.0E-16 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS05670 b2a56673cbfb4b3f6cc0f08c1b4b6a50 594 SUPERFAMILY SSF141868 347 577 4.71E-60 T 22-04-2016 IPR001633 EAL domain SMGD1_RS05670 b2a56673cbfb4b3f6cc0f08c1b4b6a50 594 SMART SM00052 340 581 5.5E-46 T 22-04-2016 IPR001633 EAL domain SMGD1_RS05670 b2a56673cbfb4b3f6cc0f08c1b4b6a50 594 SMART SM00448 15 128 5.6E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS05670 b2a56673cbfb4b3f6cc0f08c1b4b6a50 594 Gene3D G3DSA:3.20.20.450 346 577 2.8E-59 T 22-04-2016 IPR001633 EAL domain SMGD1_RS05670 b2a56673cbfb4b3f6cc0f08c1b4b6a50 594 Pfam PF00072 Response regulator receiver domain 17 128 1.9E-20 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS05670 b2a56673cbfb4b3f6cc0f08c1b4b6a50 594 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 202 321 2.9E-14 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS05670 b2a56673cbfb4b3f6cc0f08c1b4b6a50 594 SUPERFAMILY SSF52172 13 159 6.69E-29 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS13860 b9b4aae75cfc6fb28e48c4b22d6146cc 642 SUPERFAMILY SSF55073 219 377 1.1E-47 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS13860 b9b4aae75cfc6fb28e48c4b22d6146cc 642 Gene3D G3DSA:3.30.70.270 216 383 2.9E-53 T 22-04-2016 SMGD1_RS13860 b9b4aae75cfc6fb28e48c4b22d6146cc 642 Pfam PF00990 Diguanylate cyclase, GGDEF domain 215 370 1.0E-48 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS13860 b9b4aae75cfc6fb28e48c4b22d6146cc 642 Gene3D G3DSA:3.20.20.450 390 639 1.6E-90 T 22-04-2016 IPR001633 EAL domain SMGD1_RS13860 b9b4aae75cfc6fb28e48c4b22d6146cc 642 PANTHER PTHR33121 335 639 2.6E-73 T 22-04-2016 SMGD1_RS13860 b9b4aae75cfc6fb28e48c4b22d6146cc 642 PANTHER PTHR33121 27 35 2.6E-73 T 22-04-2016 SMGD1_RS13860 b9b4aae75cfc6fb28e48c4b22d6146cc 642 SMART SM00267 203 375 3.7E-60 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS13860 b9b4aae75cfc6fb28e48c4b22d6146cc 642 SUPERFAMILY SSF141868 391 639 5.36E-84 T 22-04-2016 IPR001633 EAL domain SMGD1_RS13860 b9b4aae75cfc6fb28e48c4b22d6146cc 642 Pfam PF00563 EAL domain 391 627 5.8E-68 T 22-04-2016 IPR001633 EAL domain SMGD1_RS13860 b9b4aae75cfc6fb28e48c4b22d6146cc 642 SMART SM00052 385 632 2.3E-104 T 22-04-2016 IPR001633 EAL domain SMGD1_RS13860 b9b4aae75cfc6fb28e48c4b22d6146cc 642 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 210 372 3.1E-46 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS13860 b9b4aae75cfc6fb28e48c4b22d6146cc 642 PANTHER PTHR33121:SF13 335 639 2.6E-73 T 22-04-2016 SMGD1_RS13860 b9b4aae75cfc6fb28e48c4b22d6146cc 642 PANTHER PTHR33121:SF13 27 35 2.6E-73 T 22-04-2016 SMGD1_RS10625 ba8b92f880e4b48b98e27bd0ad5f0a0e 396 Gene3D G3DSA:3.30.70.270 240 394 4.8E-47 T 22-04-2016 SMGD1_RS10625 ba8b92f880e4b48b98e27bd0ad5f0a0e 396 SMART SM00267 228 396 4.7E-55 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS10625 ba8b92f880e4b48b98e27bd0ad5f0a0e 396 Pfam PF00990 Diguanylate cyclase, GGDEF domain 239 392 2.3E-44 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS10625 ba8b92f880e4b48b98e27bd0ad5f0a0e 396 SUPERFAMILY SSF55785 101 226 1.33E-14 T 22-04-2016 IPR000014 PAS domain SMGD1_RS10625 ba8b92f880e4b48b98e27bd0ad5f0a0e 396 Gene3D G3DSA:3.30.450.20 107 226 1.5E-16 T 22-04-2016 SMGD1_RS10625 ba8b92f880e4b48b98e27bd0ad5f0a0e 396 Pfam PF13426 PAS domain 126 227 4.0E-12 T 22-04-2016 IPR000014 PAS domain SMGD1_RS10625 ba8b92f880e4b48b98e27bd0ad5f0a0e 396 PANTHER PTHR10799 9 15 2.5E-24 T 22-04-2016 SMGD1_RS10625 ba8b92f880e4b48b98e27bd0ad5f0a0e 396 PANTHER PTHR10799 272 392 2.5E-24 T 22-04-2016 SMGD1_RS10625 ba8b92f880e4b48b98e27bd0ad5f0a0e 396 SUPERFAMILY SSF55073 244 394 4.0E-44 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS10625 ba8b92f880e4b48b98e27bd0ad5f0a0e 396 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 236 395 4.1E-49 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS10625 ba8b92f880e4b48b98e27bd0ad5f0a0e 396 SMART SM00091 116 181 1.2E-5 T 22-04-2016 IPR000014 PAS domain SMGD1_RS10625 ba8b92f880e4b48b98e27bd0ad5f0a0e 396 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 113 235 7.0E-17 T 22-04-2016 IPR000014 PAS domain SMGD1_RS10625 ba8b92f880e4b48b98e27bd0ad5f0a0e 396 PANTHER PTHR10799:SF750 272 392 2.5E-24 T 22-04-2016 SMGD1_RS10625 ba8b92f880e4b48b98e27bd0ad5f0a0e 396 PANTHER PTHR10799:SF750 9 15 2.5E-24 T 22-04-2016 SMGD1_RS03995 217e12fa0ac62269cdbac7257f3a9114 213 Pfam PF02602 Uroporphyrinogen-III synthase HemD 27 191 1.7E-22 T 22-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SMGD1_RS03995 217e12fa0ac62269cdbac7257f3a9114 213 Gene3D G3DSA:3.40.50.10090 34 137 1.1E-8 T 22-04-2016 SMGD1_RS03995 217e12fa0ac62269cdbac7257f3a9114 213 SUPERFAMILY SSF69618 22 209 7.06E-24 T 22-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SMGD1_RS03995 217e12fa0ac62269cdbac7257f3a9114 213 Gene3D G3DSA:3.40.50.10090 146 187 1.8E-5 T 22-04-2016 SMGD1_RS13795 2f0c601ec32e6f4786710c6f10cfff55 290 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 108 129 1.4E-79 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SMGD1_RS13795 2f0c601ec32e6f4786710c6f10cfff55 290 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 254 272 1.4E-79 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SMGD1_RS13795 2f0c601ec32e6f4786710c6f10cfff55 290 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 32 54 1.4E-79 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SMGD1_RS13795 2f0c601ec32e6f4786710c6f10cfff55 290 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 237 253 1.4E-79 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SMGD1_RS13795 2f0c601ec32e6f4786710c6f10cfff55 290 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 153 173 1.4E-79 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SMGD1_RS13795 2f0c601ec32e6f4786710c6f10cfff55 290 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 73 100 1.4E-79 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SMGD1_RS13795 2f0c601ec32e6f4786710c6f10cfff55 290 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 202 231 1.4E-79 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SMGD1_RS13795 2f0c601ec32e6f4786710c6f10cfff55 290 Hamap MF_01576 Bifunctional protein FolD [folD]. 1 281 37.999 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SMGD1_RS13795 2f0c601ec32e6f4786710c6f10cfff55 290 Gene3D G3DSA:3.40.192.10 5 138 5.3E-50 T 22-04-2016 SMGD1_RS13795 2f0c601ec32e6f4786710c6f10cfff55 290 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 122 280 8.8E-68 T 22-04-2016 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SMGD1_RS13795 2f0c601ec32e6f4786710c6f10cfff55 290 SUPERFAMILY SSF51735 121 279 3.54E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS13795 2f0c601ec32e6f4786710c6f10cfff55 290 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 258 266 - T 22-04-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SMGD1_RS13795 2f0c601ec32e6f4786710c6f10cfff55 290 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 3 119 1.2E-39 T 22-04-2016 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SMGD1_RS13795 2f0c601ec32e6f4786710c6f10cfff55 290 PANTHER PTHR10025 2 278 3.7E-155 T 22-04-2016 SMGD1_RS13795 2f0c601ec32e6f4786710c6f10cfff55 290 SUPERFAMILY SSF53223 1 120 1.06E-39 T 22-04-2016 SMGD1_RS13795 2f0c601ec32e6f4786710c6f10cfff55 290 Gene3D G3DSA:3.40.50.720 139 262 3.9E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS09600 b7f3cfd8839eac079098f170d2fee9f4 731 Gene3D G3DSA:3.40.50.2300 140 263 4.0E-33 T 22-04-2016 SMGD1_RS09600 b7f3cfd8839eac079098f170d2fee9f4 731 SMART SM00471 550 687 4.8E-9 T 22-04-2016 IPR003607 HD/PDEase domain SMGD1_RS09600 b7f3cfd8839eac079098f170d2fee9f4 731 Pfam PF00072 Response regulator receiver domain 18 116 1.2E-16 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS09600 b7f3cfd8839eac079098f170d2fee9f4 731 Pfam PF00072 Response regulator receiver domain 141 252 2.2E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS09600 b7f3cfd8839eac079098f170d2fee9f4 731 SUPERFAMILY SSF52172 15 116 3.84E-21 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS09600 b7f3cfd8839eac079098f170d2fee9f4 731 SMART SM00086 483 525 6.1E-4 T 22-04-2016 IPR001610 PAC motif SMGD1_RS09600 b7f3cfd8839eac079098f170d2fee9f4 731 SMART SM00086 344 386 7.2E-7 T 22-04-2016 IPR001610 PAC motif SMGD1_RS09600 b7f3cfd8839eac079098f170d2fee9f4 731 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 414 529 8.6E-17 T 22-04-2016 IPR000014 PAS domain SMGD1_RS09600 b7f3cfd8839eac079098f170d2fee9f4 731 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 275 393 5.2E-21 T 22-04-2016 IPR000014 PAS domain SMGD1_RS09600 b7f3cfd8839eac079098f170d2fee9f4 731 SUPERFAMILY SSF52172 140 271 2.99E-34 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS09600 b7f3cfd8839eac079098f170d2fee9f4 731 SUPERFAMILY SSF109604 545 718 6.6E-40 T 22-04-2016 SMGD1_RS09600 b7f3cfd8839eac079098f170d2fee9f4 731 SUPERFAMILY SSF55785 283 383 2.97E-29 T 22-04-2016 IPR000014 PAS domain SMGD1_RS09600 b7f3cfd8839eac079098f170d2fee9f4 731 Pfam PF08447 PAS fold 295 379 1.8E-16 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 SMGD1_RS09600 b7f3cfd8839eac079098f170d2fee9f4 731 Pfam PF08447 PAS fold 434 514 1.3E-15 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 SMGD1_RS09600 b7f3cfd8839eac079098f170d2fee9f4 731 Pfam PF01966 HD domain 555 677 3.0E-18 T 22-04-2016 IPR006674 HD domain SMGD1_RS09600 b7f3cfd8839eac079098f170d2fee9f4 731 Gene3D G3DSA:3.40.50.2300 14 130 9.2E-22 T 22-04-2016 SMGD1_RS09600 b7f3cfd8839eac079098f170d2fee9f4 731 Gene3D G3DSA:1.10.3210.10 523 720 8.2E-21 T 22-04-2016 IPR006674 HD domain SMGD1_RS09600 b7f3cfd8839eac079098f170d2fee9f4 731 SMART SM00091 412 477 5.3E-4 T 22-04-2016 IPR000014 PAS domain SMGD1_RS09600 b7f3cfd8839eac079098f170d2fee9f4 731 SMART SM00091 270 339 0.0019 T 22-04-2016 IPR000014 PAS domain SMGD1_RS09600 b7f3cfd8839eac079098f170d2fee9f4 731 SMART SM00448 139 252 4.7E-33 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS09600 b7f3cfd8839eac079098f170d2fee9f4 731 SMART SM00448 16 126 9.1E-16 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS09600 b7f3cfd8839eac079098f170d2fee9f4 731 PANTHER PTHR26402 139 264 6.0E-36 T 22-04-2016 SMGD1_RS09600 b7f3cfd8839eac079098f170d2fee9f4 731 SUPERFAMILY SSF55785 424 519 9.6E-28 T 22-04-2016 IPR000014 PAS domain SMGD1_RS09600 b7f3cfd8839eac079098f170d2fee9f4 731 Gene3D G3DSA:3.30.450.20 427 522 5.0E-26 T 22-04-2016 SMGD1_RS09600 b7f3cfd8839eac079098f170d2fee9f4 731 Gene3D G3DSA:3.30.450.20 284 385 7.1E-29 T 22-04-2016 SMGD1_RS13875 52fcb963672de876d9a5baa32eb2f2d5 235 SMART SM00671 120 155 6.2E-7 T 22-04-2016 IPR006597 Sel1-like repeat SMGD1_RS13875 52fcb963672de876d9a5baa32eb2f2d5 235 SMART SM00671 156 188 0.0014 T 22-04-2016 IPR006597 Sel1-like repeat SMGD1_RS13875 52fcb963672de876d9a5baa32eb2f2d5 235 SMART SM00671 189 224 1.5E-7 T 22-04-2016 IPR006597 Sel1-like repeat SMGD1_RS13875 52fcb963672de876d9a5baa32eb2f2d5 235 SMART SM00671 48 83 5.8E-8 T 22-04-2016 IPR006597 Sel1-like repeat SMGD1_RS13875 52fcb963672de876d9a5baa32eb2f2d5 235 SMART SM00671 16 47 97.0 T 22-04-2016 IPR006597 Sel1-like repeat SMGD1_RS13875 52fcb963672de876d9a5baa32eb2f2d5 235 SMART SM00671 84 119 5.3E-8 T 22-04-2016 IPR006597 Sel1-like repeat SMGD1_RS13875 52fcb963672de876d9a5baa32eb2f2d5 235 SUPERFAMILY SSF81901 20 223 5.84E-51 T 22-04-2016 SMGD1_RS13875 52fcb963672de876d9a5baa32eb2f2d5 235 Gene3D G3DSA:1.25.40.10 17 84 1.4E-14 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS13875 52fcb963672de876d9a5baa32eb2f2d5 235 Gene3D G3DSA:1.25.40.10 85 157 1.8E-24 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS13875 52fcb963672de876d9a5baa32eb2f2d5 235 Gene3D G3DSA:1.25.40.10 158 232 6.2E-19 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS13875 52fcb963672de876d9a5baa32eb2f2d5 235 PANTHER PTHR11102 23 219 3.3E-46 T 22-04-2016 SMGD1_RS13875 52fcb963672de876d9a5baa32eb2f2d5 235 Pfam PF08238 Sel1 repeat 157 187 0.014 T 22-04-2016 IPR006597 Sel1-like repeat SMGD1_RS13875 52fcb963672de876d9a5baa32eb2f2d5 235 Pfam PF08238 Sel1 repeat 50 82 0.0039 T 22-04-2016 IPR006597 Sel1-like repeat SMGD1_RS13875 52fcb963672de876d9a5baa32eb2f2d5 235 Pfam PF08238 Sel1 repeat 191 221 8.4E-8 T 22-04-2016 IPR006597 Sel1-like repeat SMGD1_RS13875 52fcb963672de876d9a5baa32eb2f2d5 235 Pfam PF08238 Sel1 repeat 120 151 0.0011 T 22-04-2016 IPR006597 Sel1-like repeat SMGD1_RS13875 52fcb963672de876d9a5baa32eb2f2d5 235 Pfam PF08238 Sel1 repeat 85 119 4.1E-6 T 22-04-2016 IPR006597 Sel1-like repeat SMGD1_RS09890 ec0be368ef06f93b92891e70d698043b 455 Gene3D G3DSA:3.80.30.20 48 279 3.7E-27 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe SMGD1_RS09890 ec0be368ef06f93b92891e70d698043b 455 Pfam PF04055 Radical SAM superfamily 53 224 1.2E-17 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SMGD1_RS09890 ec0be368ef06f93b92891e70d698043b 455 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 2 455 2.0E-193 T 22-04-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22|UniPathway: UPA00251 SMGD1_RS09890 ec0be368ef06f93b92891e70d698043b 455 PANTHER PTHR13932:SF6 9 448 4.8E-192 T 22-04-2016 SMGD1_RS09890 ec0be368ef06f93b92891e70d698043b 455 SMART SM00729 47 269 1.1E-52 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 SMGD1_RS09890 ec0be368ef06f93b92891e70d698043b 455 Pfam PF06969 HemN C-terminal domain 360 426 4.2E-10 T 22-04-2016 IPR010723 HemN, C-terminal SMGD1_RS09890 ec0be368ef06f93b92891e70d698043b 455 PANTHER PTHR13932 9 448 4.8E-192 T 22-04-2016 SMGD1_RS09890 ec0be368ef06f93b92891e70d698043b 455 PIRSF PIRSF000167 2 451 1.1E-162 T 22-04-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22|UniPathway: UPA00251 SMGD1_RS09890 ec0be368ef06f93b92891e70d698043b 455 SUPERFAMILY SSF102114 9 441 2.75E-128 T 22-04-2016 SMGD1_RS09800 81f98d5a34978fa1724c85e0d4928add 220 SMART SM00014 92 211 2.9E-12 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase SMGD1_RS09800 81f98d5a34978fa1724c85e0d4928add 220 SUPERFAMILY SSF48317 6 216 1.31E-25 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase SMGD1_RS09800 81f98d5a34978fa1724c85e0d4928add 220 Gene3D G3DSA:1.20.144.10 88 213 3.1E-17 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase SMGD1_RS09800 81f98d5a34978fa1724c85e0d4928add 220 Pfam PF01569 PAP2 superfamily 94 216 2.1E-22 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase SMGD1_RS00595 7a8eb52732199175e9a4a4d2dfd87bb3 186 SMART SM00926 55 109 3.7E-12 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 SMGD1_RS00595 7a8eb52732199175e9a4a4d2dfd87bb3 186 PANTHER PTHR11615:SF140 5 186 4.3E-56 T 22-04-2016 SMGD1_RS00595 7a8eb52732199175e9a4a4d2dfd87bb3 186 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 58 107 6.1E-12 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 SMGD1_RS00595 7a8eb52732199175e9a4a4d2dfd87bb3 186 Gene3D G3DSA:2.20.25.90 58 113 1.4E-16 T 22-04-2016 SMGD1_RS00595 7a8eb52732199175e9a4a4d2dfd87bb3 186 SUPERFAMILY SSF53706 57 186 9.03E-50 T 22-04-2016 SMGD1_RS00595 7a8eb52732199175e9a4a4d2dfd87bb3 186 Pfam PF00384 Molybdopterin oxidoreductase 112 183 1.1E-13 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 SMGD1_RS00595 7a8eb52732199175e9a4a4d2dfd87bb3 186 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 14 33 4.6E-4 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal SMGD1_RS00595 7a8eb52732199175e9a4a4d2dfd87bb3 186 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 60 77 - T 22-04-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 SMGD1_RS00595 7a8eb52732199175e9a4a4d2dfd87bb3 186 PANTHER PTHR11615 5 186 4.3E-56 T 22-04-2016 SMGD1_RS00595 7a8eb52732199175e9a4a4d2dfd87bb3 186 Gene3D G3DSA:3.40.50.740 114 183 2.7E-24 T 22-04-2016 SMGD1_RS08385 9e0fa75c4cc6fc79651b37c646dcda9b 578 PANTHER PTHR23073:SF37 96 295 1.5E-18 T 22-04-2016 SMGD1_RS08385 9e0fa75c4cc6fc79651b37c646dcda9b 578 PANTHER PTHR23073:SF37 352 573 1.5E-18 T 22-04-2016 SMGD1_RS08385 9e0fa75c4cc6fc79651b37c646dcda9b 578 SMART SM00382 355 494 1.3E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain SMGD1_RS08385 9e0fa75c4cc6fc79651b37c646dcda9b 578 Gene3D G3DSA:3.40.50.300 312 507 1.1E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS08385 9e0fa75c4cc6fc79651b37c646dcda9b 578 PANTHER PTHR23073 96 295 1.5E-18 T 22-04-2016 SMGD1_RS08385 9e0fa75c4cc6fc79651b37c646dcda9b 578 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 359 491 7.3E-27 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SMGD1_RS08385 9e0fa75c4cc6fc79651b37c646dcda9b 578 SUPERFAMILY SSF52540 330 538 7.76E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS08385 9e0fa75c4cc6fc79651b37c646dcda9b 578 PANTHER PTHR23073 352 573 1.5E-18 T 22-04-2016 SMGD1_RS01510 2e4d407291748621787658d96e39297b 835 Pfam PF00563 EAL domain 591 824 1.0E-71 T 22-04-2016 IPR001633 EAL domain SMGD1_RS01510 2e4d407291748621787658d96e39297b 835 Gene3D G3DSA:3.30.450.20 271 415 1.1E-21 T 22-04-2016 SMGD1_RS01510 2e4d407291748621787658d96e39297b 835 SUPERFAMILY SSF54631 1 125 2.02E-25 T 22-04-2016 SMGD1_RS01510 2e4d407291748621787658d96e39297b 835 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 408 572 3.2E-41 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS01510 2e4d407291748621787658d96e39297b 835 Gene3D G3DSA:3.20.20.450 587 834 2.5E-96 T 22-04-2016 IPR001633 EAL domain SMGD1_RS01510 2e4d407291748621787658d96e39297b 835 Gene3D G3DSA:3.30.70.270 416 580 1.6E-47 T 22-04-2016 SMGD1_RS01510 2e4d407291748621787658d96e39297b 835 SMART SM00267 401 574 2.0E-55 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS01510 2e4d407291748621787658d96e39297b 835 Gene3D G3DSA:3.10.580.10 5 123 6.5E-25 T 22-04-2016 SMGD1_RS01510 2e4d407291748621787658d96e39297b 835 Gene3D G3DSA:3.10.580.10 133 252 3.8E-23 T 22-04-2016 SMGD1_RS01510 2e4d407291748621787658d96e39297b 835 SMART SM00116 14 62 5.0E-7 T 22-04-2016 IPR000644 CBS domain SMGD1_RS01510 2e4d407291748621787658d96e39297b 835 SMART SM00116 78 126 0.026 T 22-04-2016 IPR000644 CBS domain SMGD1_RS01510 2e4d407291748621787658d96e39297b 835 SMART SM00116 143 190 33.0 T 22-04-2016 IPR000644 CBS domain SMGD1_RS01510 2e4d407291748621787658d96e39297b 835 SMART SM00116 207 255 3.0E-4 T 22-04-2016 IPR000644 CBS domain SMGD1_RS01510 2e4d407291748621787658d96e39297b 835 SUPERFAMILY SSF55785 297 403 2.27E-13 T 22-04-2016 IPR000014 PAS domain SMGD1_RS01510 2e4d407291748621787658d96e39297b 835 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 296 408 3.0E-8 T 22-04-2016 IPR000014 PAS domain SMGD1_RS01510 2e4d407291748621787658d96e39297b 835 Pfam PF00990 Diguanylate cyclase, GGDEF domain 412 568 1.2E-44 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS01510 2e4d407291748621787658d96e39297b 835 SUPERFAMILY SSF141868 591 834 3.27E-89 T 22-04-2016 IPR001633 EAL domain SMGD1_RS01510 2e4d407291748621787658d96e39297b 835 SMART SM00052 584 829 1.7E-113 T 22-04-2016 IPR001633 EAL domain SMGD1_RS01510 2e4d407291748621787658d96e39297b 835 SUPERFAMILY SSF54631 135 260 1.52E-23 T 22-04-2016 SMGD1_RS01510 2e4d407291748621787658d96e39297b 835 Pfam PF00571 CBS domain 11 62 1.5E-9 T 22-04-2016 IPR000644 CBS domain SMGD1_RS01510 2e4d407291748621787658d96e39297b 835 Pfam PF00571 CBS domain 78 125 1.5E-7 T 22-04-2016 IPR000644 CBS domain SMGD1_RS01510 2e4d407291748621787658d96e39297b 835 Pfam PF00571 CBS domain 136 190 3.9E-4 T 22-04-2016 IPR000644 CBS domain SMGD1_RS01510 2e4d407291748621787658d96e39297b 835 Pfam PF00571 CBS domain 200 255 4.2E-8 T 22-04-2016 IPR000644 CBS domain SMGD1_RS01510 2e4d407291748621787658d96e39297b 835 SUPERFAMILY SSF55073 417 576 2.82E-43 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS01510 2e4d407291748621787658d96e39297b 835 PANTHER PTHR10799:SF774 99 251 1.1E-77 T 22-04-2016 SMGD1_RS01510 2e4d407291748621787658d96e39297b 835 PANTHER PTHR10799:SF774 716 735 1.1E-77 T 22-04-2016 SMGD1_RS01510 2e4d407291748621787658d96e39297b 835 PANTHER PTHR10799:SF774 445 664 1.1E-77 T 22-04-2016 SMGD1_RS01510 2e4d407291748621787658d96e39297b 835 PANTHER PTHR10799 99 251 1.1E-77 T 22-04-2016 SMGD1_RS01510 2e4d407291748621787658d96e39297b 835 PANTHER PTHR10799 716 735 1.1E-77 T 22-04-2016 SMGD1_RS01510 2e4d407291748621787658d96e39297b 835 PANTHER PTHR10799 445 664 1.1E-77 T 22-04-2016 SMGD1_RS01510 2e4d407291748621787658d96e39297b 835 Pfam PF08447 PAS fold 311 395 3.5E-9 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 SMGD1_RS10710 2f36c035b1140bd8025d7ed31fc08f1a 391 SUPERFAMILY SSF111352 9 364 3.01E-92 T 22-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 SMGD1_RS10710 2f36c035b1140bd8025d7ed31fc08f1a 391 Gene3D G3DSA:1.10.3430.10 9 364 2.0E-90 T 22-04-2016 IPR029020 Ammonium/urea transporter SMGD1_RS10710 2f36c035b1140bd8025d7ed31fc08f1a 391 PANTHER PTHR11730:SF6 3 386 3.0E-107 T 22-04-2016 SMGD1_RS10710 2f36c035b1140bd8025d7ed31fc08f1a 391 PANTHER PTHR11730 3 386 3.0E-107 T 22-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 SMGD1_RS10710 2f36c035b1140bd8025d7ed31fc08f1a 391 Pfam PF00909 Ammonium Transporter Family 14 384 1.0E-86 T 22-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 SMGD1_RS03070 f394cee4d7e9406b8276d1c7142ab717 348 PANTHER PTHR30469 3 343 6.7E-52 T 22-04-2016 SMGD1_RS03070 f394cee4d7e9406b8276d1c7142ab717 348 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 46 258 2.1E-16 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SMGD1_RS03070 f394cee4d7e9406b8276d1c7142ab717 348 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 29 345 1.6E-61 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 SMGD1_RS03070 f394cee4d7e9406b8276d1c7142ab717 348 SUPERFAMILY SSF111369 44 261 5.62E-19 T 22-04-2016 SMGD1_RS03070 f394cee4d7e9406b8276d1c7142ab717 348 Gene3D G3DSA:2.40.50.100 162 194 1.2E-13 T 22-04-2016 SMGD1_RS03070 f394cee4d7e9406b8276d1c7142ab717 348 Gene3D G3DSA:2.40.50.100 56 87 1.2E-13 T 22-04-2016 SMGD1_RS09695 7e26ef43c01d39b9426f279298490b50 189 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 4.6E-14 T 22-04-2016 SMGD1_RS09695 7e26ef43c01d39b9426f279298490b50 189 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 4.6E-14 T 22-04-2016 SMGD1_RS09695 7e26ef43c01d39b9426f279298490b50 189 PRINTS PR00096 Glutamine amidotransferase superfamily signature 166 179 4.6E-14 T 22-04-2016 SMGD1_RS09695 7e26ef43c01d39b9426f279298490b50 189 Pfam PF00117 Glutamine amidotransferase class-I 4 187 3.3E-53 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 SMGD1_RS09695 7e26ef43c01d39b9426f279298490b50 189 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 188 4.3E-75 T 22-04-2016 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SMGD1_RS09695 7e26ef43c01d39b9426f279298490b50 189 PANTHER PTHR11922:SF7 1 189 1.1E-80 T 22-04-2016 SMGD1_RS09695 7e26ef43c01d39b9426f279298490b50 189 PANTHER PTHR11922 1 189 1.1E-80 T 22-04-2016 SMGD1_RS09695 7e26ef43c01d39b9426f279298490b50 189 SUPERFAMILY SSF52317 1 188 6.7E-55 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SMGD1_RS09695 7e26ef43c01d39b9426f279298490b50 189 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 1.8E-6 T 22-04-2016 SMGD1_RS09695 7e26ef43c01d39b9426f279298490b50 189 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 1.8E-6 T 22-04-2016 SMGD1_RS09695 7e26ef43c01d39b9426f279298490b50 189 Gene3D G3DSA:3.40.50.880 1 188 9.1E-67 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SMGD1_RS09695 7e26ef43c01d39b9426f279298490b50 189 PRINTS PR00097 Anthranilate synthase component II signature 2 16 7.2E-35 T 22-04-2016 SMGD1_RS09695 7e26ef43c01d39b9426f279298490b50 189 PRINTS PR00097 Anthranilate synthase component II signature 120 132 7.2E-35 T 22-04-2016 SMGD1_RS09695 7e26ef43c01d39b9426f279298490b50 189 PRINTS PR00097 Anthranilate synthase component II signature 99 107 7.2E-35 T 22-04-2016 SMGD1_RS09695 7e26ef43c01d39b9426f279298490b50 189 PRINTS PR00097 Anthranilate synthase component II signature 74 85 7.2E-35 T 22-04-2016 SMGD1_RS09695 7e26ef43c01d39b9426f279298490b50 189 PRINTS PR00097 Anthranilate synthase component II signature 47 56 7.2E-35 T 22-04-2016 SMGD1_RS09695 7e26ef43c01d39b9426f279298490b50 189 PRINTS PR00097 Anthranilate synthase component II signature 166 179 7.2E-35 T 22-04-2016 SMGD1_RS01625 1b2a2972a9b316a67fd8fe6fb639d960 378 Pfam PF00155 Aminotransferase class I and II 29 367 1.2E-32 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SMGD1_RS01625 1b2a2972a9b316a67fd8fe6fb639d960 378 Gene3D G3DSA:3.40.640.10 39 251 2.0E-47 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SMGD1_RS01625 1b2a2972a9b316a67fd8fe6fb639d960 378 PANTHER PTHR11751 7 375 2.4E-90 T 22-04-2016 SMGD1_RS01625 1b2a2972a9b316a67fd8fe6fb639d960 378 Gene3D G3DSA:3.90.1150.10 252 377 2.5E-20 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SMGD1_RS01625 1b2a2972a9b316a67fd8fe6fb639d960 378 SUPERFAMILY SSF53383 29 376 4.34E-67 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SMGD1_RS01625 1b2a2972a9b316a67fd8fe6fb639d960 378 PANTHER PTHR11751:SF354 7 375 2.4E-90 T 22-04-2016 SMGD1_RS14400 695ef1c1dcf7f59fcbb92d49b645172f 435 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 20 430 5.0E-69 T 22-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 SMGD1_RS14400 695ef1c1dcf7f59fcbb92d49b645172f 435 Gene3D G3DSA:1.20.1600.10 17 428 4.0E-47 T 22-04-2016 SMGD1_RS14400 695ef1c1dcf7f59fcbb92d49b645172f 435 PANTHER PTHR30026 6 435 2.0E-51 T 22-04-2016 SMGD1_RS14400 695ef1c1dcf7f59fcbb92d49b645172f 435 SUPERFAMILY SSF56954 5 429 3.4E-61 T 22-04-2016 SMGD1_RS14400 695ef1c1dcf7f59fcbb92d49b645172f 435 PANTHER PTHR30026:SF4 6 435 2.0E-51 T 22-04-2016 SMGD1_RS14400 695ef1c1dcf7f59fcbb92d49b645172f 435 Pfam PF02321 Outer membrane efflux protein 23 207 2.5E-21 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SMGD1_RS14400 695ef1c1dcf7f59fcbb92d49b645172f 435 Pfam PF02321 Outer membrane efflux protein 229 417 1.1E-21 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SMGD1_RS10105 925d51141c1d4207c30d109626bb5c3a 973 Gene3D G3DSA:3.30.450.20 8 121 3.4E-6 T 22-04-2016 SMGD1_RS10105 925d51141c1d4207c30d109626bb5c3a 973 Pfam PF13682 Chemoreceptor zinc-binding domain 875 937 7.4E-7 T 22-04-2016 IPR025991 Chemoreceptor zinc-binding domain UniPathway: UPA00599 SMGD1_RS10105 925d51141c1d4207c30d109626bb5c3a 973 Gene3D G3DSA:3.30.70.270 423 585 1.8E-54 T 22-04-2016 SMGD1_RS10105 925d51141c1d4207c30d109626bb5c3a 973 SUPERFAMILY SSF141868 599 855 1.96E-76 T 22-04-2016 IPR001633 EAL domain SMGD1_RS10105 925d51141c1d4207c30d109626bb5c3a 973 SMART SM00091 136 202 4.3E-12 T 22-04-2016 IPR000014 PAS domain SMGD1_RS10105 925d51141c1d4207c30d109626bb5c3a 973 PANTHER PTHR33121 530 870 3.0E-72 T 22-04-2016 SMGD1_RS10105 925d51141c1d4207c30d109626bb5c3a 973 SMART SM00052 593 839 3.2E-74 T 22-04-2016 IPR001633 EAL domain SMGD1_RS10105 925d51141c1d4207c30d109626bb5c3a 973 SUPERFAMILY SSF55785 140 246 1.92E-20 T 22-04-2016 IPR000014 PAS domain SMGD1_RS10105 925d51141c1d4207c30d109626bb5c3a 973 Gene3D G3DSA:3.30.450.20 122 244 3.5E-20 T 22-04-2016 SMGD1_RS10105 925d51141c1d4207c30d109626bb5c3a 973 PANTHER PTHR33121:SF13 530 870 3.0E-72 T 22-04-2016 SMGD1_RS10105 925d51141c1d4207c30d109626bb5c3a 973 Pfam PF13185 GAF domain 272 403 4.1E-21 T 22-04-2016 IPR003018 GAF domain GO:0005515 SMGD1_RS10105 925d51141c1d4207c30d109626bb5c3a 973 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 135 247 8.1E-19 T 22-04-2016 IPR000014 PAS domain SMGD1_RS10105 925d51141c1d4207c30d109626bb5c3a 973 SUPERFAMILY SSF55073 427 584 1.18E-48 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS10105 925d51141c1d4207c30d109626bb5c3a 973 SUPERFAMILY SSF55785 13 123 2.62E-6 T 22-04-2016 IPR000014 PAS domain SMGD1_RS10105 925d51141c1d4207c30d109626bb5c3a 973 SMART SM00267 411 583 4.4E-63 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS10105 925d51141c1d4207c30d109626bb5c3a 973 SUPERFAMILY SSF55781 272 418 1.28E-9 T 22-04-2016 IPR029016 GAF domain-like SMGD1_RS10105 925d51141c1d4207c30d109626bb5c3a 973 Pfam PF00990 Diguanylate cyclase, GGDEF domain 422 578 9.9E-49 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS10105 925d51141c1d4207c30d109626bb5c3a 973 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 418 581 1.9E-41 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS10105 925d51141c1d4207c30d109626bb5c3a 973 Gene3D G3DSA:3.30.450.40 257 405 1.6E-11 T 22-04-2016 IPR029016 GAF domain-like SMGD1_RS10105 925d51141c1d4207c30d109626bb5c3a 973 Pfam PF13426 PAS domain 147 245 1.8E-11 T 22-04-2016 IPR000014 PAS domain SMGD1_RS10105 925d51141c1d4207c30d109626bb5c3a 973 Gene3D G3DSA:3.20.20.450 598 848 1.7E-78 T 22-04-2016 IPR001633 EAL domain SMGD1_RS10105 925d51141c1d4207c30d109626bb5c3a 973 Pfam PF00563 EAL domain 599 834 1.5E-60 T 22-04-2016 IPR001633 EAL domain SMGD1_RS00515 a1d755ac26787ad722ff8f5563cbbde1 530 SUPERFAMILY SSF82693 153 195 5.23E-5 T 22-04-2016 SMGD1_RS00515 a1d755ac26787ad722ff8f5563cbbde1 530 SUPERFAMILY SSF82693 293 343 5.23E-5 T 22-04-2016 SMGD1_RS00515 a1d755ac26787ad722ff8f5563cbbde1 530 Gene3D G3DSA:1.20.1640.10 324 523 8.6E-42 T 22-04-2016 SMGD1_RS00515 a1d755ac26787ad722ff8f5563cbbde1 530 Gene3D G3DSA:3.30.2090.10 197 280 1.7E-11 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMGD1_RS00515 a1d755ac26787ad722ff8f5563cbbde1 530 SUPERFAMILY SSF82866 316 519 3.4E-35 T 22-04-2016 SMGD1_RS00515 a1d755ac26787ad722ff8f5563cbbde1 530 PRINTS PR00702 Acriflavin resistance protein family signature 492 515 3.0E-24 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMGD1_RS00515 a1d755ac26787ad722ff8f5563cbbde1 530 PRINTS PR00702 Acriflavin resistance protein family signature 50 68 3.0E-24 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMGD1_RS00515 a1d755ac26787ad722ff8f5563cbbde1 530 PRINTS PR00702 Acriflavin resistance protein family signature 22 46 3.0E-24 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMGD1_RS00515 a1d755ac26787ad722ff8f5563cbbde1 530 PRINTS PR00702 Acriflavin resistance protein family signature 410 434 3.0E-24 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMGD1_RS00515 a1d755ac26787ad722ff8f5563cbbde1 530 PRINTS PR00702 Acriflavin resistance protein family signature 356 379 3.0E-24 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMGD1_RS00515 a1d755ac26787ad722ff8f5563cbbde1 530 Gene3D G3DSA:3.30.70.1430 58 146 1.2E-12 T 22-04-2016 SMGD1_RS00515 a1d755ac26787ad722ff8f5563cbbde1 530 SUPERFAMILY SSF82714 197 280 9.29E-11 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMGD1_RS00515 a1d755ac26787ad722ff8f5563cbbde1 530 PANTHER PTHR32063:SF16 14 521 1.8E-135 T 22-04-2016 SMGD1_RS00515 a1d755ac26787ad722ff8f5563cbbde1 530 Gene3D G3DSA:3.30.70.1320 294 323 2.2E-6 T 22-04-2016 SMGD1_RS00515 a1d755ac26787ad722ff8f5563cbbde1 530 Gene3D G3DSA:3.30.70.1320 153 192 2.2E-6 T 22-04-2016 SMGD1_RS00515 a1d755ac26787ad722ff8f5563cbbde1 530 SUPERFAMILY SSF82693 58 145 1.62E-15 T 22-04-2016 SMGD1_RS00515 a1d755ac26787ad722ff8f5563cbbde1 530 PANTHER PTHR32063 14 521 1.8E-135 T 22-04-2016 SMGD1_RS00515 a1d755ac26787ad722ff8f5563cbbde1 530 Pfam PF00873 AcrB/AcrD/AcrF family 21 523 9.5E-74 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMGD1_RS06270 962cc2fe69e96f630d39838766b7cb86 769 Gene3D G3DSA:3.30.565.10 4 216 2.8E-89 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS06270 962cc2fe69e96f630d39838766b7cb86 769 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 697 758 3.9E-28 T 22-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMGD1_RS06270 962cc2fe69e96f630d39838766b7cb86 769 Pfam PF01751 Toprim domain 415 510 5.6E-17 T 22-04-2016 IPR006171 Toprim domain SMGD1_RS06270 962cc2fe69e96f630d39838766b7cb86 769 SUPERFAMILY SSF56719 695 764 6.28E-87 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 SMGD1_RS06270 962cc2fe69e96f630d39838766b7cb86 769 SUPERFAMILY SSF56719 390 555 6.28E-87 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 SMGD1_RS06270 962cc2fe69e96f630d39838766b7cb86 769 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 171 3.2E-22 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS06270 962cc2fe69e96f630d39838766b7cb86 769 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 4 769 3.3E-287 T 22-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SMGD1_RS06270 962cc2fe69e96f630d39838766b7cb86 769 Pfam PF00204 DNA gyrase B 219 386 1.9E-53 T 22-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMGD1_RS06270 962cc2fe69e96f630d39838766b7cb86 769 PRINTS PR01159 DNA gyrase subunit B signature 356 370 3.1E-58 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMGD1_RS06270 962cc2fe69e96f630d39838766b7cb86 769 PRINTS PR01159 DNA gyrase subunit B signature 238 256 3.1E-58 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMGD1_RS06270 962cc2fe69e96f630d39838766b7cb86 769 PRINTS PR01159 DNA gyrase subunit B signature 738 754 3.1E-58 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMGD1_RS06270 962cc2fe69e96f630d39838766b7cb86 769 PRINTS PR01159 DNA gyrase subunit B signature 308 324 3.1E-58 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMGD1_RS06270 962cc2fe69e96f630d39838766b7cb86 769 PRINTS PR01159 DNA gyrase subunit B signature 179 194 3.1E-58 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMGD1_RS06270 962cc2fe69e96f630d39838766b7cb86 769 PRINTS PR01159 DNA gyrase subunit B signature 194 207 3.1E-58 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMGD1_RS06270 962cc2fe69e96f630d39838766b7cb86 769 PRINTS PR01159 DNA gyrase subunit B signature 466 475 3.1E-58 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMGD1_RS06270 962cc2fe69e96f630d39838766b7cb86 769 PRINTS PR01159 DNA gyrase subunit B signature 4 14 3.1E-58 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMGD1_RS06270 962cc2fe69e96f630d39838766b7cb86 769 PRINTS PR01159 DNA gyrase subunit B signature 722 734 3.1E-58 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMGD1_RS06270 962cc2fe69e96f630d39838766b7cb86 769 PRINTS PR01159 DNA gyrase subunit B signature 370 390 3.1E-58 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMGD1_RS06270 962cc2fe69e96f630d39838766b7cb86 769 SMART SM00433 33 762 3.2E-271 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMGD1_RS06270 962cc2fe69e96f630d39838766b7cb86 769 SMART SM00387 29 173 2.5E-24 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS06270 962cc2fe69e96f630d39838766b7cb86 769 SUPERFAMILY SSF54211 219 387 1.65E-49 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SMGD1_RS06270 962cc2fe69e96f630d39838766b7cb86 769 Gene3D G3DSA:3.30.230.10 218 388 3.6E-60 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SMGD1_RS06270 962cc2fe69e96f630d39838766b7cb86 769 SUPERFAMILY SSF55874 4 216 8.64E-68 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS06270 962cc2fe69e96f630d39838766b7cb86 769 PRINTS PR00418 DNA topoisomerase II family signature 701 717 8.1E-70 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMGD1_RS06270 962cc2fe69e96f630d39838766b7cb86 769 PRINTS PR00418 DNA topoisomerase II family signature 500 517 8.1E-70 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMGD1_RS06270 962cc2fe69e96f630d39838766b7cb86 769 PRINTS PR00418 DNA topoisomerase II family signature 416 430 8.1E-70 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMGD1_RS06270 962cc2fe69e96f630d39838766b7cb86 769 PRINTS PR00418 DNA topoisomerase II family signature 520 532 8.1E-70 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMGD1_RS06270 962cc2fe69e96f630d39838766b7cb86 769 PRINTS PR00418 DNA topoisomerase II family signature 482 498 8.1E-70 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMGD1_RS06270 962cc2fe69e96f630d39838766b7cb86 769 PRINTS PR00418 DNA topoisomerase II family signature 264 277 8.1E-70 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMGD1_RS06270 962cc2fe69e96f630d39838766b7cb86 769 PRINTS PR00418 DNA topoisomerase II family signature 33 48 8.1E-70 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMGD1_RS06270 962cc2fe69e96f630d39838766b7cb86 769 PRINTS PR00418 DNA topoisomerase II family signature 68 81 8.1E-70 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMGD1_RS06270 962cc2fe69e96f630d39838766b7cb86 769 PRINTS PR00418 DNA topoisomerase II family signature 111 125 8.1E-70 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMGD1_RS06270 962cc2fe69e96f630d39838766b7cb86 769 Gene3D G3DSA:3.40.50.670 400 545 1.2E-91 T 22-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMGD1_RS06270 962cc2fe69e96f630d39838766b7cb86 769 Gene3D G3DSA:3.40.50.670 686 751 1.2E-91 T 22-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMGD1_RS06270 962cc2fe69e96f630d39838766b7cb86 769 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 1 769 91.903 T 22-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SMGD1_RS06270 962cc2fe69e96f630d39838766b7cb86 769 ProSitePatterns PS00177 DNA topoisomerase II signature. 418 426 - T 22-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMGD1_RS06270 962cc2fe69e96f630d39838766b7cb86 769 PANTHER PTHR10169 690 769 8.4E-270 T 22-04-2016 SMGD1_RS06270 962cc2fe69e96f630d39838766b7cb86 769 PANTHER PTHR10169 2 548 8.4E-270 T 22-04-2016 SMGD1_RS05220 ffaee238e2aba19b9040922af5fc33d6 353 PANTHER PTHR22572:SF114 121 349 3.8E-107 T 22-04-2016 SMGD1_RS05220 ffaee238e2aba19b9040922af5fc33d6 353 PANTHER PTHR22572 121 349 3.8E-107 T 22-04-2016 SMGD1_RS05220 ffaee238e2aba19b9040922af5fc33d6 353 Pfam PF00483 Nucleotidyl transferase 122 344 2.6E-40 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 SMGD1_RS05220 ffaee238e2aba19b9040922af5fc33d6 353 SUPERFAMILY SSF53448 48 348 1.01E-69 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMGD1_RS05220 ffaee238e2aba19b9040922af5fc33d6 353 Gene3D G3DSA:3.90.550.10 121 346 6.0E-68 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMGD1_RS05220 ffaee238e2aba19b9040922af5fc33d6 353 SUPERFAMILY SSF54631 9 56 8.47E-6 T 22-04-2016 SMGD1_RS05220 ffaee238e2aba19b9040922af5fc33d6 353 Pfam PF00571 CBS domain 9 53 3.0E-5 T 22-04-2016 IPR000644 CBS domain SMGD1_RS05220 ffaee238e2aba19b9040922af5fc33d6 353 Gene3D G3DSA:3.10.580.10 7 114 1.3E-15 T 22-04-2016 SMGD1_RS06130 27fc44764fd8e9357137bf3b1ea61e6f 539 Hamap MF_01227 CTP synthase [pyrG]. 2 539 48.524 T 22-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 SMGD1_RS06130 27fc44764fd8e9357137bf3b1ea61e6f 539 Pfam PF06418 CTP synthase N-terminus 3 265 2.3E-114 T 22-04-2016 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 SMGD1_RS06130 27fc44764fd8e9357137bf3b1ea61e6f 539 Gene3D G3DSA:3.40.50.300 1 282 9.0E-121 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS06130 27fc44764fd8e9357137bf3b1ea61e6f 539 PANTHER PTHR11550:SF0 1 536 1.8E-281 T 22-04-2016 SMGD1_RS06130 27fc44764fd8e9357137bf3b1ea61e6f 539 SUPERFAMILY SSF52540 1 267 3.36E-111 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS06130 27fc44764fd8e9357137bf3b1ea61e6f 539 TIGRFAM TIGR00337 PyrG: CTP synthase 1 534 8.3E-229 T 22-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 SMGD1_RS06130 27fc44764fd8e9357137bf3b1ea61e6f 539 SUPERFAMILY SSF52317 287 535 2.04E-72 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SMGD1_RS06130 27fc44764fd8e9357137bf3b1ea61e6f 539 PANTHER PTHR11550 1 536 1.8E-281 T 22-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 SMGD1_RS06130 27fc44764fd8e9357137bf3b1ea61e6f 539 Gene3D G3DSA:3.40.50.880 286 536 1.8E-88 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SMGD1_RS06130 27fc44764fd8e9357137bf3b1ea61e6f 539 Pfam PF00117 Glutamine amidotransferase class-I 300 533 2.7E-50 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 SMGD1_RS08140 243ad379dfbed316fbb683c93994b15c 306 Gene3D G3DSA:3.30.470.10 5 129 3.8E-34 T 22-04-2016 SMGD1_RS08140 243ad379dfbed316fbb683c93994b15c 306 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 8 305 8.1E-120 T 22-04-2016 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|UniPathway: UPA00047|UniPathway: UPA00048|UniPathway: UPA00049 SMGD1_RS08140 243ad379dfbed316fbb683c93994b15c 306 Gene3D G3DSA:3.20.10.10 133 294 1.9E-55 T 22-04-2016 SMGD1_RS08140 243ad379dfbed316fbb683c93994b15c 306 PANTHER PTHR11825:SF7 6 304 9.1E-97 T 22-04-2016 SMGD1_RS08140 243ad379dfbed316fbb683c93994b15c 306 PANTHER PTHR11825 6 304 9.1E-97 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 SMGD1_RS08140 243ad379dfbed316fbb683c93994b15c 306 Pfam PF01063 Amino-transferase class IV 33 265 1.7E-43 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 SMGD1_RS08140 243ad379dfbed316fbb683c93994b15c 306 SUPERFAMILY SSF56752 3 302 6.8E-92 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 SMGD1_RS04540 9ddea482efdc6854bccbcbdba5cbd3ac 250 Pfam PF00588 SpoU rRNA Methylase family 111 247 2.9E-34 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 SMGD1_RS04540 9ddea482efdc6854bccbcbdba5cbd3ac 250 Gene3D G3DSA:3.30.1330.30 20 90 8.9E-11 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like SMGD1_RS04540 9ddea482efdc6854bccbcbdba5cbd3ac 250 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 20 94 5.4E-9 T 22-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 SMGD1_RS04540 9ddea482efdc6854bccbcbdba5cbd3ac 250 PANTHER PTHR12029:SF58 20 246 1.0E-48 T 22-04-2016 SMGD1_RS04540 9ddea482efdc6854bccbcbdba5cbd3ac 250 SUPERFAMILY SSF75217 108 248 9.16E-37 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases SMGD1_RS04540 9ddea482efdc6854bccbcbdba5cbd3ac 250 PANTHER PTHR12029 20 246 1.0E-48 T 22-04-2016 SMGD1_RS04540 9ddea482efdc6854bccbcbdba5cbd3ac 250 Gene3D G3DSA:3.40.1280.10 108 248 9.6E-44 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SMGD1_RS04540 9ddea482efdc6854bccbcbdba5cbd3ac 250 SUPERFAMILY SSF55315 15 90 4.94E-8 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like SMGD1_RS04540 9ddea482efdc6854bccbcbdba5cbd3ac 250 SMART SM00967 19 97 6.3E-7 T 22-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 SMGD1_RS13705 0747771d3ba3e4abeb1a210783c2754b 623 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 412 425 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMGD1_RS13705 0747771d3ba3e4abeb1a210783c2754b 623 PANTHER PTHR30603 68 159 1.1E-163 T 22-04-2016 SMGD1_RS13705 0747771d3ba3e4abeb1a210783c2754b 623 PANTHER PTHR30603 339 622 1.1E-163 T 22-04-2016 SMGD1_RS13705 0747771d3ba3e4abeb1a210783c2754b 623 Pfam PF00140 Sigma-70 factor, region 1.2 106 135 3.3E-14 T 22-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMGD1_RS13705 0747771d3ba3e4abeb1a210783c2754b 623 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 15 622 34.985 T 22-04-2016 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 SMGD1_RS13705 0747771d3ba3e4abeb1a210783c2754b 623 SUPERFAMILY SSF88946 122 455 2.51E-61 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMGD1_RS13705 0747771d3ba3e4abeb1a210783c2754b 623 Gene3D G3DSA:1.10.601.10 124 457 2.2E-80 T 22-04-2016 SMGD1_RS13705 0747771d3ba3e4abeb1a210783c2754b 623 Gene3D G3DSA:1.10.601.10 22 123 2.4E-4 T 22-04-2016 SMGD1_RS13705 0747771d3ba3e4abeb1a210783c2754b 623 PANTHER PTHR30603:SF0 68 159 1.1E-163 T 22-04-2016 SMGD1_RS13705 0747771d3ba3e4abeb1a210783c2754b 623 PANTHER PTHR30603:SF0 339 622 1.1E-163 T 22-04-2016 SMGD1_RS13705 0747771d3ba3e4abeb1a210783c2754b 623 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 582 608 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMGD1_RS13705 0747771d3ba3e4abeb1a210783c2754b 623 Pfam PF04539 Sigma-70 region 3 467 543 6.4E-25 T 22-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMGD1_RS13705 0747771d3ba3e4abeb1a210783c2754b 623 PRINTS PR00046 Major sigma-70 factor signature 560 572 6.0E-29 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMGD1_RS13705 0747771d3ba3e4abeb1a210783c2754b 623 PRINTS PR00046 Major sigma-70 factor signature 597 608 6.0E-29 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMGD1_RS13705 0747771d3ba3e4abeb1a210783c2754b 623 PRINTS PR00046 Major sigma-70 factor signature 412 425 6.0E-29 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMGD1_RS13705 0747771d3ba3e4abeb1a210783c2754b 623 PRINTS PR00046 Major sigma-70 factor signature 582 597 6.0E-29 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMGD1_RS13705 0747771d3ba3e4abeb1a210783c2754b 623 PRINTS PR00046 Major sigma-70 factor signature 436 444 6.0E-29 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMGD1_RS13705 0747771d3ba3e4abeb1a210783c2754b 623 Pfam PF04545 Sigma-70, region 4 556 610 3.2E-19 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMGD1_RS13705 0747771d3ba3e4abeb1a210783c2754b 623 SUPERFAMILY SSF88659 519 620 7.48E-26 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMGD1_RS13705 0747771d3ba3e4abeb1a210783c2754b 623 Gene3D G3DSA:1.10.10.10 552 622 1.7E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMGD1_RS13705 0747771d3ba3e4abeb1a210783c2754b 623 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 387 610 2.4E-39 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMGD1_RS13705 0747771d3ba3e4abeb1a210783c2754b 623 Gene3D G3DSA:1.10.10.10 461 512 1.7E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMGD1_RS13705 0747771d3ba3e4abeb1a210783c2754b 623 SUPERFAMILY SSF88659 461 534 2.57E-17 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMGD1_RS13705 0747771d3ba3e4abeb1a210783c2754b 623 Pfam PF04542 Sigma-70 region 2 390 457 4.2E-21 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMGD1_RS13705 0747771d3ba3e4abeb1a210783c2754b 623 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 385 621 6.3E-114 T 22-04-2016 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 SMGD1_RS02785 cd8c21e63dc594b6ee89a9aab18e0e9a 1025 SUPERFAMILY SSF82866 273 469 6.54E-36 T 22-04-2016 SMGD1_RS02785 cd8c21e63dc594b6ee89a9aab18e0e9a 1025 SUPERFAMILY SSF82693 123 164 3.56E-6 T 22-04-2016 SMGD1_RS02785 cd8c21e63dc594b6ee89a9aab18e0e9a 1025 Gene3D G3DSA:3.30.2090.10 166 246 6.8E-5 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMGD1_RS02785 cd8c21e63dc594b6ee89a9aab18e0e9a 1025 SUPERFAMILY SSF82693 25 116 4.45E-13 T 22-04-2016 SMGD1_RS02785 cd8c21e63dc594b6ee89a9aab18e0e9a 1025 Gene3D G3DSA:3.30.70.1320 251 283 6.2E-4 T 22-04-2016 SMGD1_RS02785 cd8c21e63dc594b6ee89a9aab18e0e9a 1025 Gene3D G3DSA:3.30.70.1320 123 161 6.2E-4 T 22-04-2016 SMGD1_RS02785 cd8c21e63dc594b6ee89a9aab18e0e9a 1025 Pfam PF00873 AcrB/AcrD/AcrF family 1 1005 2.2E-138 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMGD1_RS02785 cd8c21e63dc594b6ee89a9aab18e0e9a 1025 SUPERFAMILY SSF82693 249 303 3.56E-6 T 22-04-2016 SMGD1_RS02785 cd8c21e63dc594b6ee89a9aab18e0e9a 1025 PANTHER PTHR32063 1 607 3.0E-172 T 22-04-2016 SMGD1_RS02785 cd8c21e63dc594b6ee89a9aab18e0e9a 1025 PANTHER PTHR32063 623 1009 3.0E-172 T 22-04-2016 SMGD1_RS02785 cd8c21e63dc594b6ee89a9aab18e0e9a 1025 SUPERFAMILY SSF82714 167 246 5.89E-6 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMGD1_RS02785 cd8c21e63dc594b6ee89a9aab18e0e9a 1025 Gene3D G3DSA:1.20.1640.10 284 473 4.7E-47 T 22-04-2016 SMGD1_RS02785 cd8c21e63dc594b6ee89a9aab18e0e9a 1025 PRINTS PR00702 Acriflavin resistance protein family signature 310 333 2.1E-21 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMGD1_RS02785 cd8c21e63dc594b6ee89a9aab18e0e9a 1025 PRINTS PR00702 Acriflavin resistance protein family signature 586 600 2.1E-21 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMGD1_RS02785 cd8c21e63dc594b6ee89a9aab18e0e9a 1025 PRINTS PR00702 Acriflavin resistance protein family signature 364 388 2.1E-21 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMGD1_RS02785 cd8c21e63dc594b6ee89a9aab18e0e9a 1025 PRINTS PR00702 Acriflavin resistance protein family signature 417 440 2.1E-21 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMGD1_RS02785 cd8c21e63dc594b6ee89a9aab18e0e9a 1025 PRINTS PR00702 Acriflavin resistance protein family signature 23 41 2.1E-21 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMGD1_RS02785 cd8c21e63dc594b6ee89a9aab18e0e9a 1025 SUPERFAMILY SSF82866 791 1008 3.92E-37 T 22-04-2016 SMGD1_RS02785 cd8c21e63dc594b6ee89a9aab18e0e9a 1025 Gene3D G3DSA:3.30.70.1430 26 120 5.9E-13 T 22-04-2016 SMGD1_RS02785 cd8c21e63dc594b6ee89a9aab18e0e9a 1025 Gene3D G3DSA:1.10.3850.10 806 1006 1.6E-40 T 22-04-2016 SMGD1_RS07550 5634ad58b99d689cf7e7808f47232063 379 PANTHER PTHR11405 6 379 5.3E-173 T 22-04-2016 SMGD1_RS07550 5634ad58b99d689cf7e7808f47232063 379 SUPERFAMILY SSF52317 182 378 2.62E-49 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SMGD1_RS07550 5634ad58b99d689cf7e7808f47232063 379 SUPERFAMILY SSF52021 7 151 3.01E-53 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SMGD1_RS07550 5634ad58b99d689cf7e7808f47232063 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 310 321 6.0E-33 T 22-04-2016 SMGD1_RS07550 5634ad58b99d689cf7e7808f47232063 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 268 284 6.0E-33 T 22-04-2016 SMGD1_RS07550 5634ad58b99d689cf7e7808f47232063 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 237 251 6.0E-33 T 22-04-2016 SMGD1_RS07550 5634ad58b99d689cf7e7808f47232063 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 194 208 6.0E-33 T 22-04-2016 SMGD1_RS07550 5634ad58b99d689cf7e7808f47232063 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 285 302 6.0E-33 T 22-04-2016 SMGD1_RS07550 5634ad58b99d689cf7e7808f47232063 379 Gene3D G3DSA:3.40.50.880 156 378 2.7E-61 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SMGD1_RS07550 5634ad58b99d689cf7e7808f47232063 379 PRINTS PR00096 Glutamine amidotransferase superfamily signature 352 365 4.3E-11 T 22-04-2016 SMGD1_RS07550 5634ad58b99d689cf7e7808f47232063 379 PRINTS PR00096 Glutamine amidotransferase superfamily signature 240 249 4.3E-11 T 22-04-2016 SMGD1_RS07550 5634ad58b99d689cf7e7808f47232063 379 PRINTS PR00096 Glutamine amidotransferase superfamily signature 268 279 4.3E-11 T 22-04-2016 SMGD1_RS07550 5634ad58b99d689cf7e7808f47232063 379 PRINTS PR00097 Anthranilate synthase component II signature 240 249 1.3E-5 T 22-04-2016 SMGD1_RS07550 5634ad58b99d689cf7e7808f47232063 379 PRINTS PR00097 Anthranilate synthase component II signature 352 365 1.3E-5 T 22-04-2016 SMGD1_RS07550 5634ad58b99d689cf7e7808f47232063 379 PRINTS PR00097 Anthranilate synthase component II signature 268 279 1.3E-5 T 22-04-2016 SMGD1_RS07550 5634ad58b99d689cf7e7808f47232063 379 Pfam PF00117 Glutamine amidotransferase class-I 196 374 4.2E-40 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 SMGD1_RS07550 5634ad58b99d689cf7e7808f47232063 379 SMART SM01097 6 136 6.5E-79 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SMGD1_RS07550 5634ad58b99d689cf7e7808f47232063 379 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 8 133 7.4E-49 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SMGD1_RS07550 5634ad58b99d689cf7e7808f47232063 379 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 6 379 44.348 T 22-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SMGD1_RS07550 5634ad58b99d689cf7e7808f47232063 379 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 9 378 8.0E-141 T 22-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SMGD1_RS07550 5634ad58b99d689cf7e7808f47232063 379 Gene3D G3DSA:3.50.30.20 7 151 1.6E-55 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SMGD1_RS11170 04ff1b5de303d601db89a5801f069632 1016 SUPERFAMILY SSF82693 134 177 1.94E-15 T 22-04-2016 SMGD1_RS11170 04ff1b5de303d601db89a5801f069632 1016 SUPERFAMILY SSF82693 543 644 5.75E-10 T 22-04-2016 SMGD1_RS11170 04ff1b5de303d601db89a5801f069632 1016 Gene3D G3DSA:3.30.70.1430 551 644 9.0E-7 T 22-04-2016 SMGD1_RS11170 04ff1b5de303d601db89a5801f069632 1016 PRINTS PR00702 Acriflavin resistance protein family signature 429 452 1.05E-66 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMGD1_RS11170 04ff1b5de303d601db89a5801f069632 1016 PRINTS PR00702 Acriflavin resistance protein family signature 376 400 1.05E-66 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMGD1_RS11170 04ff1b5de303d601db89a5801f069632 1016 PRINTS PR00702 Acriflavin resistance protein family signature 321 344 1.05E-66 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMGD1_RS11170 04ff1b5de303d601db89a5801f069632 1016 PRINTS PR00702 Acriflavin resistance protein family signature 530 547 1.05E-66 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMGD1_RS11170 04ff1b5de303d601db89a5801f069632 1016 PRINTS PR00702 Acriflavin resistance protein family signature 596 610 1.05E-66 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMGD1_RS11170 04ff1b5de303d601db89a5801f069632 1016 PRINTS PR00702 Acriflavin resistance protein family signature 348 369 1.05E-66 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMGD1_RS11170 04ff1b5de303d601db89a5801f069632 1016 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 1.05E-66 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMGD1_RS11170 04ff1b5de303d601db89a5801f069632 1016 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 1.05E-66 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMGD1_RS11170 04ff1b5de303d601db89a5801f069632 1016 PRINTS PR00702 Acriflavin resistance protein family signature 454 477 1.05E-66 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMGD1_RS11170 04ff1b5de303d601db89a5801f069632 1016 SUPERFAMILY SSF82714 179 255 7.06E-7 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMGD1_RS11170 04ff1b5de303d601db89a5801f069632 1016 PANTHER PTHR32063 1 1012 0.0 T 22-04-2016 SMGD1_RS11170 04ff1b5de303d601db89a5801f069632 1016 Gene3D G3DSA:3.30.2090.10 177 255 1.8E-6 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMGD1_RS11170 04ff1b5de303d601db89a5801f069632 1016 SUPERFAMILY SSF82693 259 315 1.94E-15 T 22-04-2016 SMGD1_RS11170 04ff1b5de303d601db89a5801f069632 1016 Gene3D G3DSA:3.30.70.1430 38 133 2.2E-26 T 22-04-2016 SMGD1_RS11170 04ff1b5de303d601db89a5801f069632 1016 SUPERFAMILY SSF82693 38 129 1.53E-23 T 22-04-2016 SMGD1_RS11170 04ff1b5de303d601db89a5801f069632 1016 Pfam PF00873 AcrB/AcrD/AcrF family 1 996 1.4E-281 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMGD1_RS11170 04ff1b5de303d601db89a5801f069632 1016 SUPERFAMILY SSF82866 781 1000 1.19E-46 T 22-04-2016 SMGD1_RS11170 04ff1b5de303d601db89a5801f069632 1016 SUPERFAMILY SSF82714 692 776 4.71E-14 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMGD1_RS11170 04ff1b5de303d601db89a5801f069632 1016 Gene3D G3DSA:3.30.2090.10 691 775 1.3E-15 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMGD1_RS11170 04ff1b5de303d601db89a5801f069632 1016 Gene3D G3DSA:1.10.3850.10 784 996 2.5E-57 T 22-04-2016 SMGD1_RS11170 04ff1b5de303d601db89a5801f069632 1016 Gene3D G3DSA:1.10.3850.10 265 482 5.0E-52 T 22-04-2016 SMGD1_RS11170 04ff1b5de303d601db89a5801f069632 1016 SUPERFAMILY SSF82866 281 479 1.24E-40 T 22-04-2016 SMGD1_RS04845 c1ff454be222a1192553d4dd4fa9de94 420 ProSitePatterns PS00755 Protein secY signature 1. 62 81 - T 22-04-2016 IPR030659 SecY conserved site SMGD1_RS04845 c1ff454be222a1192553d4dd4fa9de94 420 Pfam PF00344 SecY translocase 62 400 2.9E-97 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 SMGD1_RS04845 c1ff454be222a1192553d4dd4fa9de94 420 PRINTS PR00303 Preprotein translocase SecY subunit signature 167 190 6.4E-88 T 22-04-2016 SMGD1_RS04845 c1ff454be222a1192553d4dd4fa9de94 420 PRINTS PR00303 Preprotein translocase SecY subunit signature 9 27 6.4E-88 T 22-04-2016 SMGD1_RS04845 c1ff454be222a1192553d4dd4fa9de94 420 PRINTS PR00303 Preprotein translocase SecY subunit signature 385 403 6.4E-88 T 22-04-2016 SMGD1_RS04845 c1ff454be222a1192553d4dd4fa9de94 420 PRINTS PR00303 Preprotein translocase SecY subunit signature 298 320 6.4E-88 T 22-04-2016 SMGD1_RS04845 c1ff454be222a1192553d4dd4fa9de94 420 PRINTS PR00303 Preprotein translocase SecY subunit signature 353 371 6.4E-88 T 22-04-2016 SMGD1_RS04845 c1ff454be222a1192553d4dd4fa9de94 420 PRINTS PR00303 Preprotein translocase SecY subunit signature 101 124 6.4E-88 T 22-04-2016 SMGD1_RS04845 c1ff454be222a1192553d4dd4fa9de94 420 PRINTS PR00303 Preprotein translocase SecY subunit signature 141 166 6.4E-88 T 22-04-2016 SMGD1_RS04845 c1ff454be222a1192553d4dd4fa9de94 420 PRINTS PR00303 Preprotein translocase SecY subunit signature 61 81 6.4E-88 T 22-04-2016 SMGD1_RS04845 c1ff454be222a1192553d4dd4fa9de94 420 PRINTS PR00303 Preprotein translocase SecY subunit signature 259 278 6.4E-88 T 22-04-2016 SMGD1_RS04845 c1ff454be222a1192553d4dd4fa9de94 420 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 7 411 9.1E-108 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 SMGD1_RS04845 c1ff454be222a1192553d4dd4fa9de94 420 PIRSF PIRSF004557 1 419 6.6E-120 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 SMGD1_RS04845 c1ff454be222a1192553d4dd4fa9de94 420 ProSitePatterns PS00756 Protein secY signature 2. 160 177 - T 22-04-2016 IPR030659 SecY conserved site SMGD1_RS04845 c1ff454be222a1192553d4dd4fa9de94 420 PANTHER PTHR10906 7 413 3.6E-147 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 SMGD1_RS04845 c1ff454be222a1192553d4dd4fa9de94 420 Gene3D G3DSA:1.10.3370.10 3 415 3.8E-134 T 22-04-2016 IPR023201 SecY subunit domain SMGD1_RS04845 c1ff454be222a1192553d4dd4fa9de94 420 SUPERFAMILY SSF103491 3 407 2.35E-109 T 22-04-2016 IPR023201 SecY subunit domain SMGD1_RS04845 c1ff454be222a1192553d4dd4fa9de94 420 PANTHER PTHR10906:SF2 7 413 3.6E-147 T 22-04-2016 SMGD1_RS04845 c1ff454be222a1192553d4dd4fa9de94 420 Hamap MF_01465 Protein translocase subunit SecY [secY]. 2 416 26.365 T 22-04-2016 IPR026593 Protein translocase subunit SecY SMGD1_RS08800 0dcb3c5fbdb9cac4ce82e556e692bd1c 531 PANTHER PTHR24031:SF261 15 531 1.2E-183 T 22-04-2016 SMGD1_RS08800 0dcb3c5fbdb9cac4ce82e556e692bd1c 531 PANTHER PTHR24031 15 531 1.2E-183 T 22-04-2016 SMGD1_RS08800 0dcb3c5fbdb9cac4ce82e556e692bd1c 531 Pfam PF00271 Helicase conserved C-terminal domain 243 350 4.7E-29 T 22-04-2016 IPR001650 Helicase, C-terminal SMGD1_RS08800 0dcb3c5fbdb9cac4ce82e556e692bd1c 531 SMART SM00490 269 350 1.1E-32 T 22-04-2016 IPR001650 Helicase, C-terminal SMGD1_RS08800 0dcb3c5fbdb9cac4ce82e556e692bd1c 531 Gene3D G3DSA:3.40.50.300 3 222 1.2E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS08800 0dcb3c5fbdb9cac4ce82e556e692bd1c 531 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 164 172 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site SMGD1_RS08800 0dcb3c5fbdb9cac4ce82e556e692bd1c 531 Gene3D G3DSA:3.40.50.300 223 378 2.1E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS08800 0dcb3c5fbdb9cac4ce82e556e692bd1c 531 SUPERFAMILY SSF52540 84 372 2.49E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS08800 0dcb3c5fbdb9cac4ce82e556e692bd1c 531 Pfam PF00270 DEAD/DEAH box helicase 43 205 7.1E-47 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SMGD1_RS08800 0dcb3c5fbdb9cac4ce82e556e692bd1c 531 SMART SM00487 37 233 1.1E-60 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SMGD1_RS08590 5c080f24f13160c89123292e4e5649b9 255 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 180 202 1.5E-21 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 SMGD1_RS08590 5c080f24f13160c89123292e4e5649b9 255 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 22 43 1.5E-21 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 SMGD1_RS08590 5c080f24f13160c89123292e4e5649b9 255 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 202 221 1.5E-21 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 SMGD1_RS08590 5c080f24f13160c89123292e4e5649b9 255 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 80 99 1.5E-21 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 SMGD1_RS08590 5c080f24f13160c89123292e4e5649b9 255 PANTHER PTHR30065 1 255 1.2E-44 T 22-04-2016 SMGD1_RS08590 5c080f24f13160c89123292e4e5649b9 255 PANTHER PTHR30065:SF1 1 255 1.2E-44 T 22-04-2016 SMGD1_RS08590 5c080f24f13160c89123292e4e5649b9 255 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 14 254 6.7E-63 T 22-04-2016 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 SMGD1_RS08590 5c080f24f13160c89123292e4e5649b9 255 Pfam PF01311 Bacterial export proteins, family 1 14 244 2.2E-58 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 SMGD1_RS01895 3fc36717626d77664ad112d9f18aa4ce 91 SMART SM01387 8 88 6.9E-46 T 22-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS01895 3fc36717626d77664ad112d9f18aa4ce 91 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 21.414 T 22-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 SMGD1_RS01895 3fc36717626d77664ad112d9f18aa4ce 91 Pfam PF00312 Ribosomal protein S15 8 88 8.6E-34 T 22-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS01895 3fc36717626d77664ad112d9f18aa4ce 91 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 22-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS01895 3fc36717626d77664ad112d9f18aa4ce 91 SUPERFAMILY SSF47060 3 89 7.36E-33 T 22-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 SMGD1_RS01895 3fc36717626d77664ad112d9f18aa4ce 91 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 6 88 8.2E-37 T 22-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 SMGD1_RS01895 3fc36717626d77664ad112d9f18aa4ce 91 Gene3D G3DSA:1.10.287.10 3 89 1.2E-35 T 22-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 SMGD1_RS01895 3fc36717626d77664ad112d9f18aa4ce 91 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 10 88 4.0E-34 T 22-04-2016 SMGD1_RS01895 3fc36717626d77664ad112d9f18aa4ce 91 PANTHER PTHR23321 1 91 2.0E-38 T 22-04-2016 SMGD1_RS11695 a4c1fef472060133a3fd0cae3e22de63 410 SMART SM00710 102 123 800.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat SMGD1_RS11695 a4c1fef472060133a3fd0cae3e22de63 410 SMART SM00710 244 265 300.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat SMGD1_RS11695 a4c1fef472060133a3fd0cae3e22de63 410 SMART SM00710 196 217 8200.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat SMGD1_RS11695 a4c1fef472060133a3fd0cae3e22de63 410 SMART SM00710 218 243 620.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat SMGD1_RS11695 a4c1fef472060133a3fd0cae3e22de63 410 SMART SM00710 73 101 6.2 T 22-04-2016 IPR006626 Parallel beta-helix repeat SMGD1_RS11695 a4c1fef472060133a3fd0cae3e22de63 410 SMART SM00710 289 322 770.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat SMGD1_RS11695 a4c1fef472060133a3fd0cae3e22de63 410 SMART SM00710 174 195 31.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat SMGD1_RS11695 a4c1fef472060133a3fd0cae3e22de63 410 SMART SM00710 153 173 830.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat SMGD1_RS11695 a4c1fef472060133a3fd0cae3e22de63 410 SUPERFAMILY SSF51126 19 386 9.53E-54 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor SMGD1_RS11695 a4c1fef472060133a3fd0cae3e22de63 410 Pfam PF05048 Periplasmic copper-binding protein (NosD) 137 361 5.6E-30 T 22-04-2016 IPR007742 Periplasmic copper-binding protein NosD, beta helix domain SMGD1_RS11695 a4c1fef472060133a3fd0cae3e22de63 410 TIGRFAM TIGR03804 para_beta_helix: parallel beta-helix repeat 171 210 9.2E-6 T 22-04-2016 IPR022441 Parallel beta-helix repeat-2 SMGD1_RS11695 a4c1fef472060133a3fd0cae3e22de63 410 Gene3D G3DSA:2.160.20.10 16 323 4.1E-34 T 22-04-2016 IPR012334 Pectin lyase fold SMGD1_RS11695 a4c1fef472060133a3fd0cae3e22de63 410 TIGRFAM TIGR04247 NosD_copper_fam: nitrous oxide reductase family maturation protein NosD 19 399 6.1E-105 T 22-04-2016 IPR026464 Nitrous oxide reductase family maturation protein NosD SMGD1_RS01070 63c94989234324dd50b991757a1d7029 514 Gene3D G3DSA:3.40.50.2300 11 161 8.0E-26 T 22-04-2016 SMGD1_RS01070 63c94989234324dd50b991757a1d7029 514 SMART SM00448 13 130 1.7E-20 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS01070 63c94989234324dd50b991757a1d7029 514 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 178 279 1.5E-14 T 22-04-2016 IPR000014 PAS domain SMGD1_RS01070 63c94989234324dd50b991757a1d7029 514 Gene3D G3DSA:3.30.565.10 355 513 7.8E-42 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS01070 63c94989234324dd50b991757a1d7029 514 Gene3D G3DSA:3.30.450.20 170 273 9.6E-21 T 22-04-2016 SMGD1_RS01070 63c94989234324dd50b991757a1d7029 514 SMART SM00387 399 514 7.9E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS01070 63c94989234324dd50b991757a1d7029 514 SMART SM00091 158 227 0.0047 T 22-04-2016 IPR000014 PAS domain SMGD1_RS01070 63c94989234324dd50b991757a1d7029 514 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 399 511 5.7E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS01070 63c94989234324dd50b991757a1d7029 514 SUPERFAMILY SSF52172 11 138 1.34E-26 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS01070 63c94989234324dd50b991757a1d7029 514 SUPERFAMILY SSF55874 343 512 3.27E-40 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS01070 63c94989234324dd50b991757a1d7029 514 SUPERFAMILY SSF55785 170 268 3.84E-23 T 22-04-2016 IPR000014 PAS domain SMGD1_RS01070 63c94989234324dd50b991757a1d7029 514 SUPERFAMILY SSF47384 274 356 3.34E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS01070 63c94989234324dd50b991757a1d7029 514 Pfam PF00512 His Kinase A (phospho-acceptor) domain 288 354 9.9E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS01070 63c94989234324dd50b991757a1d7029 514 Pfam PF00989 PAS fold 164 266 2.6E-13 T 22-04-2016 IPR013767 PAS fold GO:0006355 SMGD1_RS01070 63c94989234324dd50b991757a1d7029 514 SMART SM00388 288 354 1.7E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS01070 63c94989234324dd50b991757a1d7029 514 Gene3D G3DSA:1.10.287.130 280 350 1.6E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS01070 63c94989234324dd50b991757a1d7029 514 PRINTS PR00344 Bacterial sensor protein C-terminal signature 473 491 4.4E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS01070 63c94989234324dd50b991757a1d7029 514 PRINTS PR00344 Bacterial sensor protein C-terminal signature 456 466 4.4E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS01070 63c94989234324dd50b991757a1d7029 514 PRINTS PR00344 Bacterial sensor protein C-terminal signature 498 511 4.4E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS01070 63c94989234324dd50b991757a1d7029 514 PRINTS PR00344 Bacterial sensor protein C-terminal signature 438 452 4.4E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS01070 63c94989234324dd50b991757a1d7029 514 PANTHER PTHR24423 15 30 6.1E-84 T 22-04-2016 SMGD1_RS01070 63c94989234324dd50b991757a1d7029 514 PANTHER PTHR24423 157 513 6.1E-84 T 22-04-2016 SMGD1_RS01070 63c94989234324dd50b991757a1d7029 514 Pfam PF00072 Response regulator receiver domain 15 128 4.9E-20 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS05345 e665deffafeac4dcc02c0a421835278b 630 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 517 622 2.5E-13 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS05345 e665deffafeac4dcc02c0a421835278b 630 SMART SM00387 514 626 1.4E-14 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS05345 e665deffafeac4dcc02c0a421835278b 630 SUPERFAMILY SSF47384 387 471 1.0E-5 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS05345 e665deffafeac4dcc02c0a421835278b 630 PRINTS PR00344 Bacterial sensor protein C-terminal signature 610 623 7.3E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS05345 e665deffafeac4dcc02c0a421835278b 630 PRINTS PR00344 Bacterial sensor protein C-terminal signature 556 570 7.3E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS05345 e665deffafeac4dcc02c0a421835278b 630 PRINTS PR00344 Bacterial sensor protein C-terminal signature 586 604 7.3E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS05345 e665deffafeac4dcc02c0a421835278b 630 PRINTS PR00344 Bacterial sensor protein C-terminal signature 574 584 7.3E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS05345 e665deffafeac4dcc02c0a421835278b 630 SUPERFAMILY SSF55874 471 622 3.41E-25 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS05345 e665deffafeac4dcc02c0a421835278b 630 PANTHER PTHR24423 436 622 3.1E-28 T 22-04-2016 SMGD1_RS05345 e665deffafeac4dcc02c0a421835278b 630 PANTHER PTHR24423 376 420 3.1E-28 T 22-04-2016 SMGD1_RS05345 e665deffafeac4dcc02c0a421835278b 630 Gene3D G3DSA:3.30.565.10 475 622 1.3E-25 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS05345 e665deffafeac4dcc02c0a421835278b 630 PANTHER PTHR24423:SF450 436 622 3.1E-28 T 22-04-2016 SMGD1_RS05345 e665deffafeac4dcc02c0a421835278b 630 PANTHER PTHR24423:SF450 376 420 3.1E-28 T 22-04-2016 SMGD1_RS11730 64ac907c43f540a29103474e8f8fb014 175 Pfam PF00034 Cytochrome c 87 138 3.0E-5 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS11730 64ac907c43f540a29103474e8f8fb014 175 Gene3D G3DSA:1.10.760.10 86 155 3.8E-13 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS11730 64ac907c43f540a29103474e8f8fb014 175 SUPERFAMILY SSF46626 86 153 1.33E-10 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS11195 8bdfacafe302a6699a9c3229ec190666 408 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 62 83 3.4E-5 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal SMGD1_RS11195 8bdfacafe302a6699a9c3229ec190666 408 TIGRFAM TIGR00391 hydA: hydrogenase (NiFe) small subunit (hydA) 58 405 1.1E-139 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SMGD1_RS11195 8bdfacafe302a6699a9c3229ec190666 408 PANTHER PTHR30013 47 408 1.9E-164 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SMGD1_RS11195 8bdfacafe302a6699a9c3229ec190666 408 Pfam PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal 275 354 5.7E-32 T 22-04-2016 IPR027394 Cytochrome-c3 hydrogenase, C-terminal SMGD1_RS11195 8bdfacafe302a6699a9c3229ec190666 408 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 236 259 3.6E-74 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SMGD1_RS11195 8bdfacafe302a6699a9c3229ec190666 408 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 280 298 3.6E-74 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SMGD1_RS11195 8bdfacafe302a6699a9c3229ec190666 408 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 116 140 3.6E-74 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SMGD1_RS11195 8bdfacafe302a6699a9c3229ec190666 408 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 207 231 3.6E-74 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SMGD1_RS11195 8bdfacafe302a6699a9c3229ec190666 408 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 162 185 3.6E-74 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SMGD1_RS11195 8bdfacafe302a6699a9c3229ec190666 408 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 332 345 3.6E-74 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SMGD1_RS11195 8bdfacafe302a6699a9c3229ec190666 408 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 304 330 3.6E-74 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SMGD1_RS11195 8bdfacafe302a6699a9c3229ec190666 408 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 93 115 3.6E-74 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SMGD1_RS11195 8bdfacafe302a6699a9c3229ec190666 408 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 262 279 3.6E-74 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SMGD1_RS11195 8bdfacafe302a6699a9c3229ec190666 408 PIRSF PIRSF000310 51 408 1.2E-136 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SMGD1_RS11195 8bdfacafe302a6699a9c3229ec190666 408 Gene3D G3DSA:3.40.50.700 95 274 1.9E-58 T 22-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 SMGD1_RS11195 8bdfacafe302a6699a9c3229ec190666 408 Gene3D G3DSA:4.10.480.10 275 355 4.7E-37 T 22-04-2016 IPR027394 Cytochrome-c3 hydrogenase, C-terminal SMGD1_RS11195 8bdfacafe302a6699a9c3229ec190666 408 PANTHER PTHR30013:SF7 47 408 1.9E-164 T 22-04-2016 SMGD1_RS11195 8bdfacafe302a6699a9c3229ec190666 408 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 108 255 1.6E-30 T 22-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 SMGD1_RS11195 8bdfacafe302a6699a9c3229ec190666 408 SUPERFAMILY SSF56770 95 354 6.54E-86 T 22-04-2016 SMGD1_RS02705 e625054d67f95bde3689ff365da618d7 396 SUPERFAMILY SSF88697 4 141 6.06E-25 T 22-04-2016 IPR015947 PUA-like domain SMGD1_RS02705 e625054d67f95bde3689ff365da618d7 396 PANTHER PTHR11055:SF19 1 360 1.0E-36 T 22-04-2016 SMGD1_RS02705 e625054d67f95bde3689ff365da618d7 396 Pfam PF14306 PUA-like domain 4 140 4.1E-19 T 22-04-2016 IPR025980 ATP-sulfurylase PUA-like domain KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 SMGD1_RS02705 e625054d67f95bde3689ff365da618d7 396 Pfam PF01747 ATP-sulfurylase 166 348 3.7E-43 T 22-04-2016 IPR024951 Sulphate adenylyltransferase catalytic domain GO:0004781 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 SMGD1_RS02705 e625054d67f95bde3689ff365da618d7 396 SUPERFAMILY SSF52374 162 356 1.84E-49 T 22-04-2016 SMGD1_RS02705 e625054d67f95bde3689ff365da618d7 396 Gene3D G3DSA:3.10.400.10 4 140 4.4E-25 T 22-04-2016 SMGD1_RS02705 e625054d67f95bde3689ff365da618d7 396 Gene3D G3DSA:3.40.50.620 166 360 9.0E-47 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMGD1_RS02705 e625054d67f95bde3689ff365da618d7 396 PANTHER PTHR11055 1 360 1.0E-36 T 22-04-2016 SMGD1_RS01345 09478d70ed3753844331332f8b9bc70a 148 Gene3D G3DSA:3.30.420.10 2 134 6.2E-28 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMGD1_RS01345 09478d70ed3753844331332f8b9bc70a 148 PANTHER PTHR32552 1 144 8.3E-38 T 22-04-2016 SMGD1_RS01345 09478d70ed3753844331332f8b9bc70a 148 SUPERFAMILY SSF53098 2 140 1.67E-33 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMGD1_RS01345 09478d70ed3753844331332f8b9bc70a 148 PANTHER PTHR32552:SF34 1 144 8.3E-38 T 22-04-2016 SMGD1_RS01345 09478d70ed3753844331332f8b9bc70a 148 Pfam PF00665 Integrase core domain 2 95 2.7E-26 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SMGD1_RS07520 db3232de1024e65eb7520ea1a9757af4 368 Pfam PF00266 Aminotransferase class-V 2 316 2.1E-28 T 22-04-2016 IPR000192 Aminotransferase class V domain SMGD1_RS07520 db3232de1024e65eb7520ea1a9757af4 368 PANTHER PTHR21152:SF21 2 349 3.4E-68 T 22-04-2016 SMGD1_RS07520 db3232de1024e65eb7520ea1a9757af4 368 Gene3D G3DSA:3.40.640.10 13 247 1.0E-39 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SMGD1_RS07520 db3232de1024e65eb7520ea1a9757af4 368 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 175 195 - T 22-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site SMGD1_RS07520 db3232de1024e65eb7520ea1a9757af4 368 PANTHER PTHR21152 2 349 3.4E-68 T 22-04-2016 SMGD1_RS07520 db3232de1024e65eb7520ea1a9757af4 368 PIRSF PIRSF000524 1 367 6.6E-91 T 22-04-2016 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 SMGD1_RS07520 db3232de1024e65eb7520ea1a9757af4 368 Gene3D G3DSA:3.90.1150.10 249 349 1.5E-18 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SMGD1_RS07520 db3232de1024e65eb7520ea1a9757af4 368 SUPERFAMILY SSF53383 2 349 1.03E-73 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SMGD1_RS02895 cbed363fcb41b3f505e1b8c6aa98b87c 223 Gene3D G3DSA:1.10.10.10 169 219 5.1E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMGD1_RS02895 cbed363fcb41b3f505e1b8c6aa98b87c 223 SMART SM00419 161 210 5.4E-4 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 SMGD1_RS02895 cbed363fcb41b3f505e1b8c6aa98b87c 223 SMART SM00100 14 134 4.0E-7 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain SMGD1_RS02895 cbed363fcb41b3f505e1b8c6aa98b87c 223 Gene3D G3DSA:2.60.120.10 10 140 6.6E-23 T 22-04-2016 IPR014710 RmlC-like jelly roll fold SMGD1_RS02895 cbed363fcb41b3f505e1b8c6aa98b87c 223 SUPERFAMILY SSF46785 160 218 1.15E-10 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMGD1_RS02895 cbed363fcb41b3f505e1b8c6aa98b87c 223 Pfam PF13545 Crp-like helix-turn-helix domain 169 217 3.2E-10 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 SMGD1_RS02895 cbed363fcb41b3f505e1b8c6aa98b87c 223 PANTHER PTHR24567 6 217 9.1E-22 T 22-04-2016 SMGD1_RS02895 cbed363fcb41b3f505e1b8c6aa98b87c 223 Pfam PF00027 Cyclic nucleotide-binding domain 33 117 3.4E-8 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain SMGD1_RS02895 cbed363fcb41b3f505e1b8c6aa98b87c 223 SUPERFAMILY SSF51206 8 141 8.77E-24 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like SMGD1_RS03005 b1480cfbe684a4d2f7b7f40d3eec2874 330 Pfam PF02169 LPP20 lipoprotein 18 111 9.3E-10 T 22-04-2016 IPR024952 Lipoprotein LPP20-like SMGD1_RS08480 c82e058520ab8ec3a378490234a8a4df 144 PANTHER PTHR21248 21 143 2.2E-21 T 22-04-2016 SMGD1_RS08480 c82e058520ab8ec3a378490234a8a4df 144 Pfam PF13091 PLD-like domain 34 142 2.0E-21 T 22-04-2016 IPR025202 Phospholipase D-like domain SMGD1_RS08480 c82e058520ab8ec3a378490234a8a4df 144 PANTHER PTHR21248:SF3 21 143 2.2E-21 T 22-04-2016 SMGD1_RS08480 c82e058520ab8ec3a378490234a8a4df 144 SUPERFAMILY SSF56024 18 142 7.4E-25 T 22-04-2016 SMGD1_RS08480 c82e058520ab8ec3a378490234a8a4df 144 Gene3D G3DSA:3.30.870.10 21 142 7.4E-24 T 22-04-2016 SMGD1_RS07375 2c656b0d1e8f7856d03b87757e226beb 159 Gene3D G3DSA:3.10.50.40 5 68 3.0E-9 T 22-04-2016 SMGD1_RS07375 2c656b0d1e8f7856d03b87757e226beb 159 Gene3D G3DSA:3.10.50.40 122 139 3.0E-9 T 22-04-2016 SMGD1_RS07375 2c656b0d1e8f7856d03b87757e226beb 159 SUPERFAMILY SSF54534 3 139 2.75E-21 T 22-04-2016 SMGD1_RS01990 9f2e11cd7e7d5a4b00ab948ef8abb1dc 195 Pfam PF01339 CheB methylesterase 13 190 8.2E-37 T 22-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 SMGD1_RS01990 9f2e11cd7e7d5a4b00ab948ef8abb1dc 195 PANTHER PTHR24421:SF16 11 191 3.4E-25 T 22-04-2016 SMGD1_RS01990 9f2e11cd7e7d5a4b00ab948ef8abb1dc 195 Gene3D G3DSA:3.40.50.180 8 194 5.1E-43 T 22-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 SMGD1_RS01990 9f2e11cd7e7d5a4b00ab948ef8abb1dc 195 PANTHER PTHR24421 11 191 3.4E-25 T 22-04-2016 SMGD1_RS01990 9f2e11cd7e7d5a4b00ab948ef8abb1dc 195 SUPERFAMILY SSF52738 11 194 6.67E-39 T 22-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 SMGD1_RS07875 d00bdfbd2f0bc7f94538b1b843c62fe2 337 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 206 212 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 SMGD1_RS07875 d00bdfbd2f0bc7f94538b1b843c62fe2 337 SUPERFAMILY SSF53335 7 287 6.41E-39 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS07875 d00bdfbd2f0bc7f94538b1b843c62fe2 337 Gene3D G3DSA:3.40.50.150 8 64 3.5E-23 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS07875 d00bdfbd2f0bc7f94538b1b843c62fe2 337 Gene3D G3DSA:3.40.50.150 189 290 3.5E-23 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS07875 d00bdfbd2f0bc7f94538b1b843c62fe2 337 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 9 280 3.5E-37 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 SMGD1_RS07875 d00bdfbd2f0bc7f94538b1b843c62fe2 337 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 203 215 2.1E-8 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 SMGD1_RS07875 d00bdfbd2f0bc7f94538b1b843c62fe2 337 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 9 25 2.1E-8 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 SMGD1_RS07875 d00bdfbd2f0bc7f94538b1b843c62fe2 337 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 34 48 2.1E-8 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 SMGD1_RS08705 749f2895786af94919c94815a1e2e89a 294 Gene3D G3DSA:3.40.50.2300 2 128 3.3E-43 T 22-04-2016 SMGD1_RS08705 749f2895786af94919c94815a1e2e89a 294 PANTHER PTHR26402 6 125 8.0E-49 T 22-04-2016 SMGD1_RS08705 749f2895786af94919c94815a1e2e89a 294 PANTHER PTHR26402:SF495 6 125 8.0E-49 T 22-04-2016 SMGD1_RS08705 749f2895786af94919c94815a1e2e89a 294 Pfam PF00072 Response regulator receiver domain 8 118 3.5E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS08705 749f2895786af94919c94815a1e2e89a 294 SUPERFAMILY SSF52172 3 135 2.7E-43 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS08705 749f2895786af94919c94815a1e2e89a 294 SMART SM00267 123 293 2.3E-43 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS08705 749f2895786af94919c94815a1e2e89a 294 Gene3D G3DSA:3.30.70.270 136 292 6.5E-44 T 22-04-2016 SMGD1_RS08705 749f2895786af94919c94815a1e2e89a 294 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 131 292 2.2E-44 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS08705 749f2895786af94919c94815a1e2e89a 294 Pfam PF00990 Diguanylate cyclase, GGDEF domain 134 289 2.2E-40 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS08705 749f2895786af94919c94815a1e2e89a 294 SUPERFAMILY SSF55073 139 292 4.16E-41 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS08705 749f2895786af94919c94815a1e2e89a 294 SMART SM00448 6 117 2.8E-40 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS09485 02de94ee27cafac52c523fc7dfa564cb 859 Gene3D G3DSA:1.10.1780.10 6 148 8.1E-25 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 SMGD1_RS09485 02de94ee27cafac52c523fc7dfa564cb 859 Pfam PF07724 AAA domain (Cdc48 subfamily) 601 761 1.5E-54 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SMGD1_RS09485 02de94ee27cafac52c523fc7dfa564cb 859 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 205 317 3.4E-15 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SMGD1_RS09485 02de94ee27cafac52c523fc7dfa564cb 859 PANTHER PTHR11638:SF18 1 859 0.0 T 22-04-2016 SMGD1_RS09485 02de94ee27cafac52c523fc7dfa564cb 859 SUPERFAMILY SSF81923 7 157 5.1E-24 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 SMGD1_RS09485 02de94ee27cafac52c523fc7dfa564cb 859 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 295 307 - T 22-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 SMGD1_RS09485 02de94ee27cafac52c523fc7dfa564cb 859 PANTHER PTHR11638 1 859 0.0 T 22-04-2016 SMGD1_RS09485 02de94ee27cafac52c523fc7dfa564cb 859 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 767 845 1.7E-24 T 22-04-2016 IPR019489 Clp ATPase, C-terminal SMGD1_RS09485 02de94ee27cafac52c523fc7dfa564cb 859 Gene3D G3DSA:1.10.8.60 345 429 6.3E-33 T 22-04-2016 SMGD1_RS09485 02de94ee27cafac52c523fc7dfa564cb 859 Gene3D G3DSA:3.40.50.300 554 777 3.6E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS09485 02de94ee27cafac52c523fc7dfa564cb 859 SMART SM00382 601 745 3.3E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain SMGD1_RS09485 02de94ee27cafac52c523fc7dfa564cb 859 SMART SM00382 200 345 1.4E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain SMGD1_RS09485 02de94ee27cafac52c523fc7dfa564cb 859 SUPERFAMILY SSF52540 160 548 3.0E-90 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS09485 02de94ee27cafac52c523fc7dfa564cb 859 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 650 668 2.5E-39 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 SMGD1_RS09485 02de94ee27cafac52c523fc7dfa564cb 859 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 712 726 2.5E-39 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 SMGD1_RS09485 02de94ee27cafac52c523fc7dfa564cb 859 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 605 623 2.5E-39 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 SMGD1_RS09485 02de94ee27cafac52c523fc7dfa564cb 859 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 679 697 2.5E-39 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 SMGD1_RS09485 02de94ee27cafac52c523fc7dfa564cb 859 Gene3D G3DSA:1.10.8.60 778 858 4.6E-28 T 22-04-2016 SMGD1_RS09485 02de94ee27cafac52c523fc7dfa564cb 859 SMART SM01086 767 856 6.5E-35 T 22-04-2016 IPR019489 Clp ATPase, C-terminal SMGD1_RS09485 02de94ee27cafac52c523fc7dfa564cb 859 Gene3D G3DSA:3.40.50.300 161 343 7.6E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS09485 02de94ee27cafac52c523fc7dfa564cb 859 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 22 69 2.8E-6 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 SMGD1_RS09485 02de94ee27cafac52c523fc7dfa564cb 859 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 104 146 0.3 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 SMGD1_RS09485 02de94ee27cafac52c523fc7dfa564cb 859 SUPERFAMILY SSF52540 550 852 8.6E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS09485 02de94ee27cafac52c523fc7dfa564cb 859 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 635 653 - T 22-04-2016 IPR028299 ClpA/B, conserved site 2 SMGD1_RS00655 aa35218fc9623685a6c4f4611e941ac1 259 Gene3D G3DSA:1.10.3720.10 14 259 3.9E-40 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMGD1_RS00655 aa35218fc9623685a6c4f4611e941ac1 259 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 72 255 4.4E-16 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMGD1_RS00655 aa35218fc9623685a6c4f4611e941ac1 259 PANTHER PTHR30183 14 259 2.9E-56 T 22-04-2016 SMGD1_RS00655 aa35218fc9623685a6c4f4611e941ac1 259 SUPERFAMILY SSF161098 12 255 1.5E-45 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMGD1_RS09950 8639f6268d07d256239a6fbeadb78174 257 Pfam PF04055 Radical SAM superfamily 7 153 1.3E-10 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SMGD1_RS09950 8639f6268d07d256239a6fbeadb78174 257 PANTHER PTHR11918:SF47 1 173 6.3E-34 T 22-04-2016 SMGD1_RS09950 8639f6268d07d256239a6fbeadb78174 257 PANTHER PTHR11918 1 173 6.3E-34 T 22-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein SMGD1_RS09950 8639f6268d07d256239a6fbeadb78174 257 Gene3D G3DSA:3.80.30.20 7 172 2.7E-19 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe SMGD1_RS09950 8639f6268d07d256239a6fbeadb78174 257 SUPERFAMILY SSF102114 4 208 5.36E-26 T 22-04-2016 SMGD1_RS09950 8639f6268d07d256239a6fbeadb78174 257 SMART SM00729 5 196 3.7E-5 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 SMGD1_RS06660 86354bd77ef12dded8157bddc817a132 529 Pfam PF00672 HAMP domain 178 247 7.5E-7 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SMGD1_RS06660 86354bd77ef12dded8157bddc817a132 529 SMART SM00304 198 252 0.0031 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SMGD1_RS06660 86354bd77ef12dded8157bddc817a132 529 SUPERFAMILY SSF58104 220 528 2.35E-57 T 22-04-2016 SMGD1_RS06660 86354bd77ef12dded8157bddc817a132 529 SMART SM00283 267 528 1.0E-38 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SMGD1_RS06660 86354bd77ef12dded8157bddc817a132 529 PANTHER PTHR32089 44 528 1.9E-60 T 22-04-2016 SMGD1_RS06660 86354bd77ef12dded8157bddc817a132 529 Gene3D G3DSA:1.10.287.950 286 494 1.8E-45 T 22-04-2016 SMGD1_RS06660 86354bd77ef12dded8157bddc817a132 529 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 345 527 1.1E-38 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SMGD1_RS05470 722adce61ac0a24b5ad16054f01dbc0b 1017 Gene3D G3DSA:3.30.2090.10 184 267 9.2E-17 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMGD1_RS05470 722adce61ac0a24b5ad16054f01dbc0b 1017 Gene3D G3DSA:3.30.2090.10 707 789 4.9E-10 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMGD1_RS05470 722adce61ac0a24b5ad16054f01dbc0b 1017 SUPERFAMILY SSF82866 790 1016 1.27E-44 T 22-04-2016 SMGD1_RS05470 722adce61ac0a24b5ad16054f01dbc0b 1017 SUPERFAMILY SSF82714 184 266 1.29E-15 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMGD1_RS05470 722adce61ac0a24b5ad16054f01dbc0b 1017 SUPERFAMILY SSF82693 138 183 1.44E-16 T 22-04-2016 SMGD1_RS05470 722adce61ac0a24b5ad16054f01dbc0b 1017 SUPERFAMILY SSF82693 269 325 1.44E-16 T 22-04-2016 SMGD1_RS05470 722adce61ac0a24b5ad16054f01dbc0b 1017 Pfam PF00873 AcrB/AcrD/AcrF family 5 1012 2.2E-255 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMGD1_RS05470 722adce61ac0a24b5ad16054f01dbc0b 1017 Gene3D G3DSA:1.10.3850.10 277 495 2.3E-56 T 22-04-2016 SMGD1_RS05470 722adce61ac0a24b5ad16054f01dbc0b 1017 Gene3D G3DSA:1.10.3850.10 796 1015 1.8E-47 T 22-04-2016 SMGD1_RS05470 722adce61ac0a24b5ad16054f01dbc0b 1017 PANTHER PTHR32063 2 1017 0.0 T 22-04-2016 SMGD1_RS05470 722adce61ac0a24b5ad16054f01dbc0b 1017 SUPERFAMILY SSF82714 707 791 3.4E-11 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMGD1_RS05470 722adce61ac0a24b5ad16054f01dbc0b 1017 PRINTS PR00702 Acriflavin resistance protein family signature 466 489 6.9E-38 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMGD1_RS05470 722adce61ac0a24b5ad16054f01dbc0b 1017 PRINTS PR00702 Acriflavin resistance protein family signature 441 464 6.9E-38 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMGD1_RS05470 722adce61ac0a24b5ad16054f01dbc0b 1017 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 6.9E-38 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMGD1_RS05470 722adce61ac0a24b5ad16054f01dbc0b 1017 PRINTS PR00702 Acriflavin resistance protein family signature 358 379 6.9E-38 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMGD1_RS05470 722adce61ac0a24b5ad16054f01dbc0b 1017 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 6.9E-38 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMGD1_RS05470 722adce61ac0a24b5ad16054f01dbc0b 1017 PRINTS PR00702 Acriflavin resistance protein family signature 331 354 6.9E-38 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMGD1_RS05470 722adce61ac0a24b5ad16054f01dbc0b 1017 PRINTS PR00702 Acriflavin resistance protein family signature 386 410 6.9E-38 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMGD1_RS05470 722adce61ac0a24b5ad16054f01dbc0b 1017 PANTHER PTHR32063:SF24 2 1017 0.0 T 22-04-2016 SMGD1_RS05470 722adce61ac0a24b5ad16054f01dbc0b 1017 SUPERFAMILY SSF82866 293 493 4.58E-41 T 22-04-2016 SMGD1_RS05470 722adce61ac0a24b5ad16054f01dbc0b 1017 Gene3D G3DSA:3.30.70.1430 42 137 2.6E-20 T 22-04-2016 SMGD1_RS05470 722adce61ac0a24b5ad16054f01dbc0b 1017 SUPERFAMILY SSF82693 42 127 6.54E-19 T 22-04-2016 SMGD1_RS05470 722adce61ac0a24b5ad16054f01dbc0b 1017 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1016 1.2E-275 T 22-04-2016 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 SMGD1_RS04795 01d64ecdba94429ede41d2e06fdc81d8 237 PANTHER PTHR10359:SF17 40 235 4.6E-47 T 22-04-2016 SMGD1_RS04795 01d64ecdba94429ede41d2e06fdc81d8 237 SUPERFAMILY SSF48150 51 234 2.51E-36 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 SMGD1_RS04795 01d64ecdba94429ede41d2e06fdc81d8 237 SUPERFAMILY SSF48150 4 22 2.51E-36 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 SMGD1_RS04795 01d64ecdba94429ede41d2e06fdc81d8 237 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 60 190 3.9E-11 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 SMGD1_RS04795 01d64ecdba94429ede41d2e06fdc81d8 237 SMART SM00478 63 219 6.1E-18 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 SMGD1_RS04795 01d64ecdba94429ede41d2e06fdc81d8 237 PANTHER PTHR10359 40 235 4.6E-47 T 22-04-2016 SMGD1_RS04795 01d64ecdba94429ede41d2e06fdc81d8 237 Gene3D G3DSA:1.10.340.30 51 143 6.5E-23 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 SMGD1_RS04795 01d64ecdba94429ede41d2e06fdc81d8 237 Gene3D G3DSA:1.10.1670.10 144 224 3.1E-18 T 22-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal SMGD1_RS02265 cc2d1cfaead11ced4ade80ff8eaf6458 392 SUPERFAMILY SSF56059 13 163 2.33E-55 T 22-04-2016 SMGD1_RS02265 cc2d1cfaead11ced4ade80ff8eaf6458 392 SUPERFAMILY SSF56059 276 390 2.33E-55 T 22-04-2016 SMGD1_RS02265 cc2d1cfaead11ced4ade80ff8eaf6458 392 PANTHER PTHR30094:SF0 38 392 1.6E-45 T 22-04-2016 SMGD1_RS02265 cc2d1cfaead11ced4ade80ff8eaf6458 392 PANTHER PTHR30094 38 392 1.6E-45 T 22-04-2016 SMGD1_RS02265 cc2d1cfaead11ced4ade80ff8eaf6458 392 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 13 390 4.4E-113 T 22-04-2016 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain SMGD1_RS02265 cc2d1cfaead11ced4ade80ff8eaf6458 392 SUPERFAMILY SSF52440 179 289 2.68E-15 T 22-04-2016 IPR016185 Pre-ATP-grasp domain SMGD1_RS12875 5c98e014fa7434a208998cb0c2951d3d 394 PANTHER PTHR12286:SF6 1 391 3.0E-145 T 22-04-2016 SMGD1_RS12875 5c98e014fa7434a208998cb0c2951d3d 394 PANTHER PTHR12286 1 391 3.0E-145 T 22-04-2016 SMGD1_RS12875 5c98e014fa7434a208998cb0c2951d3d 394 SUPERFAMILY SSF51735 1 187 1.47E-15 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS12875 5c98e014fa7434a208998cb0c2951d3d 394 Pfam PF16653 Saccharopine dehydrogenase C-terminal domain 138 385 1.2E-32 T 22-04-2016 IPR032095 Saccharopine dehydrogenase, C-terminal SMGD1_RS12875 5c98e014fa7434a208998cb0c2951d3d 394 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 5 132 9.9E-29 T 22-04-2016 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 SMGD1_RS12875 5c98e014fa7434a208998cb0c2951d3d 394 Gene3D G3DSA:3.40.50.720 1 187 3.6E-27 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS13405 2128ba2a9135dbcc1570b85193bf8084 280 PIRSF PIRSF000904 1 280 5.8E-89 T 22-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 SMGD1_RS13405 2128ba2a9135dbcc1570b85193bf8084 280 SUPERFAMILY SSF56655 2 276 3.97E-68 T 22-04-2016 SMGD1_RS13405 2128ba2a9135dbcc1570b85193bf8084 280 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 5 132 1.1E-29 T 22-04-2016 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 SMGD1_RS13405 2128ba2a9135dbcc1570b85193bf8084 280 PIRSF PIRSF500210 1 280 3.9E-88 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 SMGD1_RS13405 2128ba2a9135dbcc1570b85193bf8084 280 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 1 278 29.286 T 22-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 SMGD1_RS13405 2128ba2a9135dbcc1570b85193bf8084 280 PANTHER PTHR11556 1 277 6.5E-61 T 22-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 SMGD1_RS13405 2128ba2a9135dbcc1570b85193bf8084 280 Gene3D G3DSA:3.40.190.80 150 277 1.1E-39 T 22-04-2016 SMGD1_RS13405 2128ba2a9135dbcc1570b85193bf8084 280 PRINTS PR01958 Sedoheptulose-1,7-bisphosphatase family signature 37 52 4.5E-14 T 22-04-2016 IPR023079 Sedoheptulose-1,7-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 SMGD1_RS13405 2128ba2a9135dbcc1570b85193bf8084 280 PRINTS PR01958 Sedoheptulose-1,7-bisphosphatase family signature 107 125 4.5E-14 T 22-04-2016 IPR023079 Sedoheptulose-1,7-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 SMGD1_RS13405 2128ba2a9135dbcc1570b85193bf8084 280 PRINTS PR01958 Sedoheptulose-1,7-bisphosphatase family signature 249 273 4.5E-14 T 22-04-2016 IPR023079 Sedoheptulose-1,7-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 SMGD1_RS13405 2128ba2a9135dbcc1570b85193bf8084 280 PRINTS PR01958 Sedoheptulose-1,7-bisphosphatase family signature 186 206 4.5E-14 T 22-04-2016 IPR023079 Sedoheptulose-1,7-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 SMGD1_RS13405 2128ba2a9135dbcc1570b85193bf8084 280 Gene3D G3DSA:3.30.540.10 2 147 6.7E-36 T 22-04-2016 SMGD1_RS12490 f4705cc1ceab8ddbb4352a9c926fb879 124 Pfam PF00717 Peptidase S24-like 41 106 3.7E-6 T 22-04-2016 IPR019759 Peptidase S24/S26A/S26B SMGD1_RS12490 f4705cc1ceab8ddbb4352a9c926fb879 124 SUPERFAMILY SSF51306 32 118 2.62E-15 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C SMGD1_RS12490 f4705cc1ceab8ddbb4352a9c926fb879 124 Gene3D G3DSA:2.10.109.10 16 123 4.2E-16 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain SMGD1_RS11745 0f7396648075194f89bb75a1191bde07 405 Pfam PF05048 Periplasmic copper-binding protein (NosD) 134 364 4.7E-43 T 22-04-2016 IPR007742 Periplasmic copper-binding protein NosD, beta helix domain SMGD1_RS11745 0f7396648075194f89bb75a1191bde07 405 Gene3D G3DSA:2.160.20.10 21 396 1.1E-32 T 22-04-2016 IPR012334 Pectin lyase fold SMGD1_RS11745 0f7396648075194f89bb75a1191bde07 405 SUPERFAMILY SSF51126 21 390 1.33E-60 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor SMGD1_RS11745 0f7396648075194f89bb75a1191bde07 405 TIGRFAM TIGR04247 NosD_copper_fam: nitrous oxide reductase family maturation protein NosD 21 402 9.1E-127 T 22-04-2016 IPR026464 Nitrous oxide reductase family maturation protein NosD SMGD1_RS11745 0f7396648075194f89bb75a1191bde07 405 SMART SM00710 126 154 1500.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat SMGD1_RS11745 0f7396648075194f89bb75a1191bde07 405 SMART SM00710 104 125 720.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat SMGD1_RS11745 0f7396648075194f89bb75a1191bde07 405 SMART SM00710 198 219 1900.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat SMGD1_RS11745 0f7396648075194f89bb75a1191bde07 405 SMART SM00710 273 294 4200.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat SMGD1_RS11745 0f7396648075194f89bb75a1191bde07 405 SMART SM00710 246 267 150.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat SMGD1_RS11745 0f7396648075194f89bb75a1191bde07 405 SMART SM00710 75 103 2100.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat SMGD1_RS11745 0f7396648075194f89bb75a1191bde07 405 TIGRFAM TIGR03804 para_beta_helix: parallel beta-helix repeat 102 138 1.1E-4 T 22-04-2016 IPR022441 Parallel beta-helix repeat-2 SMGD1_RS07450 dc04e060451cab1d7d260fc046aa07f5 495 Gene3D G3DSA:3.40.190.10 79 188 8.7E-13 T 22-04-2016 SMGD1_RS07450 dc04e060451cab1d7d260fc046aa07f5 495 PANTHER PTHR31528 2 270 4.0E-41 T 22-04-2016 IPR027939 NMT1/THI5 family GO:0009228 UniPathway: UPA00060 SMGD1_RS07450 dc04e060451cab1d7d260fc046aa07f5 495 Pfam PF00990 Diguanylate cyclase, GGDEF domain 339 492 1.2E-36 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS07450 dc04e060451cab1d7d260fc046aa07f5 495 SMART SM00267 327 495 1.6E-36 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS07450 dc04e060451cab1d7d260fc046aa07f5 495 Pfam PF09084 NMT1/THI5 like 1 199 2.3E-44 T 22-04-2016 IPR015168 SsuA/THI5-like SMGD1_RS07450 dc04e060451cab1d7d260fc046aa07f5 495 SUPERFAMILY SSF53850 2 216 1.69E-28 T 22-04-2016 SMGD1_RS07450 dc04e060451cab1d7d260fc046aa07f5 495 Gene3D G3DSA:3.30.70.270 340 494 2.5E-41 T 22-04-2016 SMGD1_RS07450 dc04e060451cab1d7d260fc046aa07f5 495 Gene3D G3DSA:3.40.190.10 9 78 3.3E-5 T 22-04-2016 SMGD1_RS07450 dc04e060451cab1d7d260fc046aa07f5 495 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 334 494 4.0E-43 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS07450 dc04e060451cab1d7d260fc046aa07f5 495 SUPERFAMILY SSF55073 343 494 1.57E-38 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS07885 5005e93d4ab99688e900fe98c837c75c 258 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 25 39 6.3E-35 T 22-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 SMGD1_RS07885 5005e93d4ab99688e900fe98c837c75c 258 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 75 95 6.3E-35 T 22-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 SMGD1_RS07885 5005e93d4ab99688e900fe98c837c75c 258 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 196 213 6.3E-35 T 22-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 SMGD1_RS07885 5005e93d4ab99688e900fe98c837c75c 258 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 238 258 6.3E-35 T 22-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 SMGD1_RS07885 5005e93d4ab99688e900fe98c837c75c 258 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 215 233 6.3E-35 T 22-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 SMGD1_RS07885 5005e93d4ab99688e900fe98c837c75c 258 Gene3D G3DSA:3.40.50.150 5 257 1.5E-64 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS07885 5005e93d4ab99688e900fe98c837c75c 258 PANTHER PTHR13370:SF8 4 35 6.7E-30 T 22-04-2016 SMGD1_RS07885 5005e93d4ab99688e900fe98c837c75c 258 PANTHER PTHR13370:SF8 55 258 6.7E-30 T 22-04-2016 SMGD1_RS07885 5005e93d4ab99688e900fe98c837c75c 258 SUPERFAMILY SSF53335 5 258 6.23E-60 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS07885 5005e93d4ab99688e900fe98c837c75c 258 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 29 35 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 SMGD1_RS07885 5005e93d4ab99688e900fe98c837c75c 258 Pfam PF01555 DNA methylase 26 253 2.7E-49 T 22-04-2016 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 SMGD1_RS07885 5005e93d4ab99688e900fe98c837c75c 258 PANTHER PTHR13370 4 35 6.7E-30 T 22-04-2016 SMGD1_RS07885 5005e93d4ab99688e900fe98c837c75c 258 PANTHER PTHR13370 55 258 6.7E-30 T 22-04-2016 SMGD1_RS07760 db7aa5c6a276a122a9c64d61e417bce8 405 Gene3D G3DSA:3.40.980.10 155 325 1.5E-52 T 22-04-2016 IPR001453 MoaB/Mog domain SMGD1_RS07760 db7aa5c6a276a122a9c64d61e417bce8 405 SUPERFAMILY SSF63867 323 390 2.75E-9 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 SMGD1_RS07760 db7aa5c6a276a122a9c64d61e417bce8 405 SMART SM00852 173 310 1.8E-30 T 22-04-2016 IPR001453 MoaB/Mog domain SMGD1_RS07760 db7aa5c6a276a122a9c64d61e417bce8 405 Pfam PF03453 MoeA N-terminal region (domain I and II) 5 160 2.9E-34 T 22-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 SMGD1_RS07760 db7aa5c6a276a122a9c64d61e417bce8 405 Pfam PF00994 Probable molybdopterin binding domain 190 306 4.1E-24 T 22-04-2016 IPR001453 MoaB/Mog domain SMGD1_RS07760 db7aa5c6a276a122a9c64d61e417bce8 405 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 170 303 5.7E-28 T 22-04-2016 IPR001453 MoaB/Mog domain SMGD1_RS07760 db7aa5c6a276a122a9c64d61e417bce8 405 SUPERFAMILY SSF63882 6 169 4.45E-48 T 22-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 SMGD1_RS07760 db7aa5c6a276a122a9c64d61e417bce8 405 Gene3D G3DSA:2.40.340.10 326 390 1.5E-8 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 SMGD1_RS07760 db7aa5c6a276a122a9c64d61e417bce8 405 SUPERFAMILY SSF53218 170 314 3.14E-34 T 22-04-2016 IPR001453 MoaB/Mog domain SMGD1_RS07760 db7aa5c6a276a122a9c64d61e417bce8 405 Gene3D G3DSA:2.170.190.11 45 134 6.3E-25 T 22-04-2016 SMGD1_RS07760 db7aa5c6a276a122a9c64d61e417bce8 405 Gene3D G3DSA:3.90.105.10 135 154 7.3E-14 T 22-04-2016 SMGD1_RS07760 db7aa5c6a276a122a9c64d61e417bce8 405 Gene3D G3DSA:3.90.105.10 24 44 7.3E-14 T 22-04-2016 SMGD1_RS07760 db7aa5c6a276a122a9c64d61e417bce8 405 Pfam PF03454 MoeA C-terminal region (domain IV) 325 390 5.4E-9 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 SMGD1_RS07760 db7aa5c6a276a122a9c64d61e417bce8 405 PANTHER PTHR10192 7 405 2.0E-121 T 22-04-2016 SMGD1_RS03275 868fdc346a9508d32f578c1da889e145 405 SUPERFAMILY SSF53901 212 404 3.84E-64 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SMGD1_RS03275 868fdc346a9508d32f578c1da889e145 405 PIRSF PIRSF000447 1 405 1.9E-150 T 22-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 SMGD1_RS03275 868fdc346a9508d32f578c1da889e145 405 SUPERFAMILY SSF53901 1 249 1.01E-66 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SMGD1_RS03275 868fdc346a9508d32f578c1da889e145 405 Gene3D G3DSA:3.40.47.10 2 255 2.1E-65 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SMGD1_RS03275 868fdc346a9508d32f578c1da889e145 405 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 244 5.9E-51 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal SMGD1_RS03275 868fdc346a9508d32f578c1da889e145 405 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 252 362 9.4E-30 T 22-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal SMGD1_RS03275 868fdc346a9508d32f578c1da889e145 405 PANTHER PTHR11712 1 404 4.5E-165 T 22-04-2016 SMGD1_RS03275 868fdc346a9508d32f578c1da889e145 405 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 2 403 4.9E-171 T 22-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 SMGD1_RS03275 868fdc346a9508d32f578c1da889e145 405 SMART SM00825 Beta-ketoacyl synthase 4 405 1.9E-12 T 22-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain SMGD1_RS03275 868fdc346a9508d32f578c1da889e145 405 Gene3D G3DSA:3.40.47.10 261 404 5.5E-54 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SMGD1_RS03520 df312fa4f32655416c6ffe1a6231ee95 363 SUPERFAMILY SSF52172 4 147 6.69E-39 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS03520 df312fa4f32655416c6ffe1a6231ee95 363 Pfam PF01966 HD domain 168 288 3.9E-16 T 22-04-2016 IPR006674 HD domain SMGD1_RS03520 df312fa4f32655416c6ffe1a6231ee95 363 Pfam PF00072 Response regulator receiver domain 8 120 9.8E-30 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS03520 df312fa4f32655416c6ffe1a6231ee95 363 SUPERFAMILY SSF109604 160 329 5.32E-35 T 22-04-2016 SMGD1_RS03520 df312fa4f32655416c6ffe1a6231ee95 363 SMART SM00448 6 119 4.5E-41 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS03520 df312fa4f32655416c6ffe1a6231ee95 363 PANTHER PTHR26402 254 363 1.5E-44 T 22-04-2016 SMGD1_RS03520 df312fa4f32655416c6ffe1a6231ee95 363 PANTHER PTHR26402 6 137 1.5E-44 T 22-04-2016 SMGD1_RS03520 df312fa4f32655416c6ffe1a6231ee95 363 PANTHER PTHR26402:SF495 254 363 1.5E-44 T 22-04-2016 SMGD1_RS03520 df312fa4f32655416c6ffe1a6231ee95 363 PANTHER PTHR26402:SF495 6 137 1.5E-44 T 22-04-2016 SMGD1_RS03520 df312fa4f32655416c6ffe1a6231ee95 363 Gene3D G3DSA:1.10.3210.10 153 331 4.1E-18 T 22-04-2016 IPR006674 HD domain SMGD1_RS03520 df312fa4f32655416c6ffe1a6231ee95 363 SMART SM00471 161 298 2.2E-5 T 22-04-2016 IPR003607 HD/PDEase domain SMGD1_RS03520 df312fa4f32655416c6ffe1a6231ee95 363 Gene3D G3DSA:3.40.50.2300 2 133 4.1E-41 T 22-04-2016 SMGD1_RS12905 9c17963d9d15170374b6fecb99165861 1118 Gene3D G3DSA:3.20.20.70 827 1110 6.4E-124 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMGD1_RS12905 9c17963d9d15170374b6fecb99165861 1118 PANTHER PTHR11938:SF1 9 1106 0.0 T 22-04-2016 SMGD1_RS12905 9c17963d9d15170374b6fecb99165861 1118 SUPERFAMILY SSF56235 15 428 1.8E-129 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SMGD1_RS12905 9c17963d9d15170374b6fecb99165861 1118 SUPERFAMILY SSF51395 441 1110 1.32E-195 T 22-04-2016 SMGD1_RS12905 9c17963d9d15170374b6fecb99165861 1118 Gene3D G3DSA:3.60.20.10 15 435 1.5E-151 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SMGD1_RS12905 9c17963d9d15170374b6fecb99165861 1118 PANTHER PTHR11938 9 1106 0.0 T 22-04-2016 SMGD1_RS12905 9c17963d9d15170374b6fecb99165861 1118 Pfam PF00310 Glutamine amidotransferases class-II 15 425 1.2E-149 T 22-04-2016 IPR017932 Glutamine amidotransferase type 2 domain SMGD1_RS12905 9c17963d9d15170374b6fecb99165861 1118 Pfam PF01645 Conserved region in glutamate synthase 806 1111 3.7E-118 T 22-04-2016 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 SMGD1_RS12905 9c17963d9d15170374b6fecb99165861 1118 Pfam PF04898 Glutamate synthase central domain 454 741 5.0E-88 T 22-04-2016 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 UniPathway: UPA00045 SMGD1_RS12905 9c17963d9d15170374b6fecb99165861 1118 Gene3D G3DSA:3.20.20.70 436 779 9.0E-78 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMGD1_RS13740 69ba84f23b360a1fb199809ffc4e3d20 1021 Gene3D G3DSA:3.30.70.1430 542 646 7.0E-24 T 22-04-2016 SMGD1_RS13740 69ba84f23b360a1fb199809ffc4e3d20 1021 SUPERFAMILY SSF82693 540 646 3.66E-22 T 22-04-2016 SMGD1_RS13740 69ba84f23b360a1fb199809ffc4e3d20 1021 SUPERFAMILY SSF82714 156 246 1.05E-19 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMGD1_RS13740 69ba84f23b360a1fb199809ffc4e3d20 1021 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 3 1007 0.0 T 22-04-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 SMGD1_RS13740 69ba84f23b360a1fb199809ffc4e3d20 1021 Gene3D G3DSA:3.30.2090.10 697 781 1.8E-21 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMGD1_RS13740 69ba84f23b360a1fb199809ffc4e3d20 1021 SUPERFAMILY SSF82693 248 304 8.37E-17 T 22-04-2016 SMGD1_RS13740 69ba84f23b360a1fb199809ffc4e3d20 1021 PANTHER PTHR32063:SF11 1 1014 0.0 T 22-04-2016 SMGD1_RS13740 69ba84f23b360a1fb199809ffc4e3d20 1021 Gene3D G3DSA:3.30.70.1430 12 112 3.7E-31 T 22-04-2016 SMGD1_RS13740 69ba84f23b360a1fb199809ffc4e3d20 1021 Pfam PF00873 AcrB/AcrD/AcrF family 3 1001 0.0 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMGD1_RS13740 69ba84f23b360a1fb199809ffc4e3d20 1021 Gene3D G3DSA:3.30.2090.10 155 249 4.0E-26 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMGD1_RS13740 69ba84f23b360a1fb199809ffc4e3d20 1021 Gene3D G3DSA:1.20.1640.10 269 481 3.0E-51 T 22-04-2016 SMGD1_RS13740 69ba84f23b360a1fb199809ffc4e3d20 1021 Gene3D G3DSA:1.10.3850.10 789 1002 5.9E-53 T 22-04-2016 SMGD1_RS13740 69ba84f23b360a1fb199809ffc4e3d20 1021 SUPERFAMILY SSF82693 116 155 8.37E-17 T 22-04-2016 SMGD1_RS13740 69ba84f23b360a1fb199809ffc4e3d20 1021 SUPERFAMILY SSF82714 697 781 7.32E-19 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMGD1_RS13740 69ba84f23b360a1fb199809ffc4e3d20 1021 SUPERFAMILY SSF82866 274 472 2.62E-43 T 22-04-2016 SMGD1_RS13740 69ba84f23b360a1fb199809ffc4e3d20 1021 SUPERFAMILY SSF82866 780 1005 5.75E-44 T 22-04-2016 SMGD1_RS13740 69ba84f23b360a1fb199809ffc4e3d20 1021 PRINTS PR00702 Acriflavin resistance protein family signature 366 390 2.8E-64 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMGD1_RS13740 69ba84f23b360a1fb199809ffc4e3d20 1021 PRINTS PR00702 Acriflavin resistance protein family signature 10 28 2.8E-64 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMGD1_RS13740 69ba84f23b360a1fb199809ffc4e3d20 1021 PRINTS PR00702 Acriflavin resistance protein family signature 527 544 2.8E-64 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMGD1_RS13740 69ba84f23b360a1fb199809ffc4e3d20 1021 PRINTS PR00702 Acriflavin resistance protein family signature 446 469 2.8E-64 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMGD1_RS13740 69ba84f23b360a1fb199809ffc4e3d20 1021 PRINTS PR00702 Acriflavin resistance protein family signature 596 610 2.8E-64 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMGD1_RS13740 69ba84f23b360a1fb199809ffc4e3d20 1021 PRINTS PR00702 Acriflavin resistance protein family signature 421 444 2.8E-64 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMGD1_RS13740 69ba84f23b360a1fb199809ffc4e3d20 1021 PRINTS PR00702 Acriflavin resistance protein family signature 310 333 2.8E-64 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMGD1_RS13740 69ba84f23b360a1fb199809ffc4e3d20 1021 SUPERFAMILY SSF82693 12 105 1.49E-25 T 22-04-2016 SMGD1_RS13740 69ba84f23b360a1fb199809ffc4e3d20 1021 PANTHER PTHR32063 1 1014 0.0 T 22-04-2016 SMGD1_RS02315 e04eb03036bf449dcade81ddc6734930 603 Gene3D G3DSA:3.60.20.10 1 214 6.6E-55 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SMGD1_RS02315 e04eb03036bf449dcade81ddc6734930 603 SUPERFAMILY SSF52402 226 372 2.33E-63 T 22-04-2016 SMGD1_RS02315 e04eb03036bf449dcade81ddc6734930 603 SUPERFAMILY SSF52402 456 572 2.33E-63 T 22-04-2016 SMGD1_RS02315 e04eb03036bf449dcade81ddc6734930 603 Pfam PF00733 Asparagine synthase 234 598 8.4E-81 T 22-04-2016 IPR001962 Asparagine synthase GO:0004066|GO:0006529 SMGD1_RS02315 e04eb03036bf449dcade81ddc6734930 603 Pfam PF13537 Glutamine amidotransferase domain 42 157 1.9E-37 T 22-04-2016 IPR017932 Glutamine amidotransferase type 2 domain SMGD1_RS02315 e04eb03036bf449dcade81ddc6734930 603 PANTHER PTHR11772:SF10 448 600 4.3E-118 T 22-04-2016 SMGD1_RS02315 e04eb03036bf449dcade81ddc6734930 603 PANTHER PTHR11772:SF10 2 374 4.3E-118 T 22-04-2016 SMGD1_RS02315 e04eb03036bf449dcade81ddc6734930 603 PIRSF PIRSF001589 1 602 4.1E-133 T 22-04-2016 SMGD1_RS02315 e04eb03036bf449dcade81ddc6734930 603 PANTHER PTHR11772 448 600 4.3E-118 T 22-04-2016 SMGD1_RS02315 e04eb03036bf449dcade81ddc6734930 603 PANTHER PTHR11772 2 374 4.3E-118 T 22-04-2016 SMGD1_RS02315 e04eb03036bf449dcade81ddc6734930 603 SUPERFAMILY SSF56235 1 207 2.14E-48 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SMGD1_RS02315 e04eb03036bf449dcade81ddc6734930 603 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 536 2.0E-122 T 22-04-2016 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|UniPathway: UPA00134 SMGD1_RS02315 e04eb03036bf449dcade81ddc6734930 603 Gene3D G3DSA:3.40.50.620 217 386 9.0E-77 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMGD1_RS02315 e04eb03036bf449dcade81ddc6734930 603 Gene3D G3DSA:3.40.50.620 452 599 9.0E-77 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMGD1_RS12745 a35048f34dea722bcfda761007e41a3d 245 Gene3D G3DSA:3.40.50.1820 13 237 5.9E-31 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SMGD1_RS12745 a35048f34dea722bcfda761007e41a3d 245 Pfam PF12697 Alpha/beta hydrolase family 28 231 1.5E-9 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SMGD1_RS12745 a35048f34dea722bcfda761007e41a3d 245 PANTHER PTHR10992 13 241 9.5E-20 T 22-04-2016 SMGD1_RS12745 a35048f34dea722bcfda761007e41a3d 245 SUPERFAMILY SSF53474 13 235 1.33E-28 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SMGD1_RS00605 a9c0429d1d89565cf0ad22f8c5647f2d 202 PANTHER PTHR11938:SF96 145 180 2.1E-63 T 22-04-2016 SMGD1_RS00605 a9c0429d1d89565cf0ad22f8c5647f2d 202 PANTHER PTHR11938:SF96 5 127 2.1E-63 T 22-04-2016 SMGD1_RS00605 a9c0429d1d89565cf0ad22f8c5647f2d 202 SUPERFAMILY SSF54862 1 184 3.98E-50 T 22-04-2016 SMGD1_RS00605 a9c0429d1d89565cf0ad22f8c5647f2d 202 Pfam PF13247 4Fe-4S dicluster domain 56 168 1.8E-12 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SMGD1_RS00605 a9c0429d1d89565cf0ad22f8c5647f2d 202 PANTHER PTHR11938 145 180 2.1E-63 T 22-04-2016 SMGD1_RS00605 a9c0429d1d89565cf0ad22f8c5647f2d 202 PANTHER PTHR11938 5 127 2.1E-63 T 22-04-2016 SMGD1_RS00605 a9c0429d1d89565cf0ad22f8c5647f2d 202 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 91 102 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SMGD1_RS00605 a9c0429d1d89565cf0ad22f8c5647f2d 202 Gene3D G3DSA:3.30.70.20 67 122 5.7E-22 T 22-04-2016 SMGD1_RS00605 a9c0429d1d89565cf0ad22f8c5647f2d 202 Gene3D G3DSA:3.30.70.20 6 66 4.4E-20 T 22-04-2016 SMGD1_RS00605 a9c0429d1d89565cf0ad22f8c5647f2d 202 Gene3D G3DSA:3.30.70.20 123 181 4.4E-20 T 22-04-2016 SMGD1_RS01945 f66585f960fffc48b1fa3d92186ca826 236 Pfam PF00696 Amino acid kinase family 4 214 2.8E-31 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SMGD1_RS01945 f66585f960fffc48b1fa3d92186ca826 236 Hamap MF_01220_B Uridylate kinase [pyrH]. 1 236 41.998 T 22-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 SMGD1_RS01945 f66585f960fffc48b1fa3d92186ca826 236 PANTHER PTHR21499 4 227 2.8E-102 T 22-04-2016 SMGD1_RS01945 f66585f960fffc48b1fa3d92186ca826 236 PANTHER PTHR21499:SF23 4 227 2.8E-102 T 22-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 SMGD1_RS01945 f66585f960fffc48b1fa3d92186ca826 236 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 3 231 1.4E-93 T 22-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 SMGD1_RS01945 f66585f960fffc48b1fa3d92186ca826 236 Gene3D G3DSA:3.40.1160.10 3 229 2.2E-75 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SMGD1_RS01945 f66585f960fffc48b1fa3d92186ca826 236 PIRSF PIRSF005650 1 236 4.8E-86 T 22-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 SMGD1_RS01945 f66585f960fffc48b1fa3d92186ca826 236 SUPERFAMILY SSF53633 3 229 4.58E-65 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SMGD1_RS11095 4697b3940accc0e8d21d4170bb02ede6 254 Pfam PF00691 OmpA family 151 246 6.0E-20 T 22-04-2016 IPR006665 OmpA-like domain SMGD1_RS11095 4697b3940accc0e8d21d4170bb02ede6 254 ProSitePatterns PS01068 OmpA-like domain. 184 228 - T 22-04-2016 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 SMGD1_RS11095 4697b3940accc0e8d21d4170bb02ede6 254 SUPERFAMILY SSF103088 143 252 2.75E-33 T 22-04-2016 IPR006665 OmpA-like domain SMGD1_RS11095 4697b3940accc0e8d21d4170bb02ede6 254 PANTHER PTHR30128:SF10 53 252 6.5E-43 T 22-04-2016 SMGD1_RS11095 4697b3940accc0e8d21d4170bb02ede6 254 Gene3D G3DSA:3.30.1330.60 146 253 4.0E-34 T 22-04-2016 IPR006665 OmpA-like domain SMGD1_RS11095 4697b3940accc0e8d21d4170bb02ede6 254 Gene3D G3DSA:4.10.1080.10 52 135 2.6E-15 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 SMGD1_RS11095 4697b3940accc0e8d21d4170bb02ede6 254 PANTHER PTHR30128 53 252 6.5E-43 T 22-04-2016 SMGD1_RS11095 4697b3940accc0e8d21d4170bb02ede6 254 SUPERFAMILY SSF103647 48 133 1.29E-20 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 SMGD1_RS11095 4697b3940accc0e8d21d4170bb02ede6 254 PRINTS PR01021 OMPA domain signature 152 174 5.2E-8 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SMGD1_RS11095 4697b3940accc0e8d21d4170bb02ede6 254 PRINTS PR01021 OMPA domain signature 197 213 5.2E-8 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SMGD1_RS11095 4697b3940accc0e8d21d4170bb02ede6 254 PRINTS PR01021 OMPA domain signature 182 197 5.2E-8 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SMGD1_RS11095 4697b3940accc0e8d21d4170bb02ede6 254 Pfam PF02412 Thrombospondin type 3 repeat 112 133 0.002 T 22-04-2016 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: REACT_16888 SMGD1_RS11095 4697b3940accc0e8d21d4170bb02ede6 254 Pfam PF02412 Thrombospondin type 3 repeat 83 102 0.0011 T 22-04-2016 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: REACT_16888 SMGD1_RS06860 cdc845be3a82cff326de77e9071a7bf3 245 Gene3D G3DSA:3.40.1130.10 71 231 2.2E-11 T 22-04-2016 SMGD1_RS06860 cdc845be3a82cff326de77e9071a7bf3 245 SMART SM00563 80 193 6.1E-21 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 SMGD1_RS06860 cdc845be3a82cff326de77e9071a7bf3 245 SUPERFAMILY SSF69593 20 241 1.31E-27 T 22-04-2016 SMGD1_RS06860 cdc845be3a82cff326de77e9071a7bf3 245 Pfam PF01553 Acyltransferase 69 190 2.5E-20 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 SMGD1_RS06860 cdc845be3a82cff326de77e9071a7bf3 245 PANTHER PTHR10434 10 241 1.0E-25 T 22-04-2016 SMGD1_RS10570 afb4f306a18fa19a4164b2dc2c6d48d2 352 SMART SM00248 296 325 1.7E-4 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 SMGD1_RS10570 afb4f306a18fa19a4164b2dc2c6d48d2 352 SMART SM00248 263 292 1.9 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 SMGD1_RS10570 afb4f306a18fa19a4164b2dc2c6d48d2 352 SUPERFAMILY SSF48403 240 349 1.87E-29 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain SMGD1_RS10570 afb4f306a18fa19a4164b2dc2c6d48d2 352 Gene3D G3DSA:1.25.40.20 242 350 2.7E-28 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain SMGD1_RS10570 afb4f306a18fa19a4164b2dc2c6d48d2 352 Pfam PF12796 Ankyrin repeats (3 copies) 244 327 6.3E-12 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain SMGD1_RS10570 afb4f306a18fa19a4164b2dc2c6d48d2 352 PANTHER PTHR24123 242 349 3.1E-25 T 22-04-2016 SMGD1_RS02560 1ec0029e1f1b45c1b3c6843ec076f984 257 PANTHER PTHR21485 2 126 4.3E-25 T 22-04-2016 SMGD1_RS02560 1ec0029e1f1b45c1b3c6843ec076f984 257 Pfam PF02348 Cytidylyltransferase 3 175 1.2E-32 T 22-04-2016 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 SMGD1_RS02560 1ec0029e1f1b45c1b3c6843ec076f984 257 Gene3D G3DSA:3.90.550.10 1 202 5.6E-30 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMGD1_RS02560 1ec0029e1f1b45c1b3c6843ec076f984 257 SUPERFAMILY SSF53448 2 205 2.35E-31 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMGD1_RS01900 f84d5577c495a00d5c742ac249e8692d 779 Gene3D G3DSA:3.20.20.450 544 776 8.8E-69 T 22-04-2016 IPR001633 EAL domain SMGD1_RS01900 f84d5577c495a00d5c742ac249e8692d 779 Pfam PF11845 Protein of unknown function (DUF3365) 18 192 3.5E-37 T 22-04-2016 IPR021796 Protein of unknown function DUF3365 SMGD1_RS01900 f84d5577c495a00d5c742ac249e8692d 779 SUPERFAMILY SSF55785 263 365 5.58E-30 T 22-04-2016 IPR000014 PAS domain SMGD1_RS01900 f84d5577c495a00d5c742ac249e8692d 779 Pfam PF13426 PAS domain 267 367 4.3E-17 T 22-04-2016 IPR000014 PAS domain SMGD1_RS01900 f84d5577c495a00d5c742ac249e8692d 779 Gene3D G3DSA:3.30.70.270 380 533 7.7E-25 T 22-04-2016 SMGD1_RS01900 f84d5577c495a00d5c742ac249e8692d 779 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 257 374 7.6E-22 T 22-04-2016 IPR000014 PAS domain SMGD1_RS01900 f84d5577c495a00d5c742ac249e8692d 779 SUPERFAMILY SSF141868 547 776 1.83E-67 T 22-04-2016 IPR001633 EAL domain SMGD1_RS01900 f84d5577c495a00d5c742ac249e8692d 779 Gene3D G3DSA:3.30.450.20 263 367 1.7E-29 T 22-04-2016 SMGD1_RS01900 f84d5577c495a00d5c742ac249e8692d 779 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 376 527 7.0E-22 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS01900 f84d5577c495a00d5c742ac249e8692d 779 SMART SM00086 326 368 1.9E-9 T 22-04-2016 IPR001610 PAC motif SMGD1_RS01900 f84d5577c495a00d5c742ac249e8692d 779 SMART SM00091 252 320 1.2E-4 T 22-04-2016 IPR000014 PAS domain SMGD1_RS01900 f84d5577c495a00d5c742ac249e8692d 779 SMART SM00052 540 779 3.4E-58 T 22-04-2016 IPR001633 EAL domain SMGD1_RS01900 f84d5577c495a00d5c742ac249e8692d 779 PANTHER PTHR33121 499 776 2.7E-62 T 22-04-2016 SMGD1_RS01900 f84d5577c495a00d5c742ac249e8692d 779 PANTHER PTHR33121:SF10 499 776 2.7E-62 T 22-04-2016 SMGD1_RS01900 f84d5577c495a00d5c742ac249e8692d 779 SMART SM00267 368 528 2.1E-14 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS01900 f84d5577c495a00d5c742ac249e8692d 779 SUPERFAMILY SSF55073 384 527 1.41E-24 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS01900 f84d5577c495a00d5c742ac249e8692d 779 Pfam PF00563 EAL domain 547 774 7.3E-63 T 22-04-2016 IPR001633 EAL domain SMGD1_RS01900 f84d5577c495a00d5c742ac249e8692d 779 Pfam PF00990 Diguanylate cyclase, GGDEF domain 379 521 1.2E-19 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS06320 a3c04bc89236bb8e8700207c1ad7afa0 340 PANTHER PTHR23409 1 340 8.5E-88 T 22-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 SMGD1_RS06320 a3c04bc89236bb8e8700207c1ad7afa0 340 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 117 133 - T 22-04-2016 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 SMGD1_RS06320 a3c04bc89236bb8e8700207c1ad7afa0 340 PIRSF PIRSF000355 1 340 1.6E-123 T 22-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 SMGD1_RS06320 a3c04bc89236bb8e8700207c1ad7afa0 340 SUPERFAMILY SSF47240 14 339 3.92E-94 T 22-04-2016 IPR009078 Ferritin-like superfamily SMGD1_RS06320 a3c04bc89236bb8e8700207c1ad7afa0 340 Pfam PF00268 Ribonucleotide reductase, small chain 29 304 2.8E-74 T 22-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 SMGD1_RS06320 a3c04bc89236bb8e8700207c1ad7afa0 340 Gene3D G3DSA:1.10.620.20 14 311 2.0E-101 T 22-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 SMGD1_RS06320 a3c04bc89236bb8e8700207c1ad7afa0 340 PANTHER PTHR23409:SF18 1 340 8.5E-88 T 22-04-2016 SMGD1_RS03915 6f49632cdb84260ff17c29f187bb5003 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 9.9E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMGD1_RS03915 6f49632cdb84260ff17c29f187bb5003 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 9.9E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMGD1_RS03915 6f49632cdb84260ff17c29f187bb5003 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 9.9E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMGD1_RS03915 6f49632cdb84260ff17c29f187bb5003 300 SUPERFAMILY SSF46785 3 112 1.65E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMGD1_RS03915 6f49632cdb84260ff17c29f187bb5003 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 1.1E-15 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMGD1_RS03915 6f49632cdb84260ff17c29f187bb5003 300 PANTHER PTHR30126:SF11 3 297 6.6E-56 T 22-04-2016 SMGD1_RS03915 6f49632cdb84260ff17c29f187bb5003 300 Pfam PF03466 LysR substrate binding domain 96 295 4.6E-19 T 22-04-2016 IPR005119 LysR, substrate-binding SMGD1_RS03915 6f49632cdb84260ff17c29f187bb5003 300 Gene3D G3DSA:1.10.10.10 4 82 2.7E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMGD1_RS03915 6f49632cdb84260ff17c29f187bb5003 300 SUPERFAMILY SSF53850 92 296 5.12E-22 T 22-04-2016 SMGD1_RS03915 6f49632cdb84260ff17c29f187bb5003 300 PANTHER PTHR30126 3 297 6.6E-56 T 22-04-2016 SMGD1_RS03915 6f49632cdb84260ff17c29f187bb5003 300 Gene3D G3DSA:3.40.190.10 96 187 3.2E-14 T 22-04-2016 SMGD1_RS03915 6f49632cdb84260ff17c29f187bb5003 300 Gene3D G3DSA:3.40.190.10 188 257 1.7E-4 T 22-04-2016 SMGD1_RS04695 4f68b267612b5594cb19ed79ca211b84 37 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 36 - T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS04695 4f68b267612b5594cb19ed79ca211b84 37 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 37 5.1E-22 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS04695 4f68b267612b5594cb19ed79ca211b84 37 PANTHER PTHR18804 1 37 1.7E-14 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS04695 4f68b267612b5594cb19ed79ca211b84 37 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 37 3.0E-8 T 22-04-2016 SMGD1_RS04695 4f68b267612b5594cb19ed79ca211b84 37 SUPERFAMILY SSF57840 1 37 4.45E-15 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS04695 4f68b267612b5594cb19ed79ca211b84 37 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 37 16.47 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS04695 4f68b267612b5594cb19ed79ca211b84 37 Pfam PF00444 Ribosomal protein L36 1 37 1.6E-17 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS01540 ce415255613a1287a00c3687b8114154 958 SMART SM00448 716 828 2.1E-30 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS01540 ce415255613a1287a00c3687b8114154 958 Pfam PF00072 Response regulator receiver domain 719 828 4.2E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS01540 ce415255613a1287a00c3687b8114154 958 SMART SM00387 579 695 3.1E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS01540 ce415255613a1287a00c3687b8114154 958 PANTHER PTHR24423 446 869 4.7E-150 T 22-04-2016 SMGD1_RS01540 ce415255613a1287a00c3687b8114154 958 PANTHER PTHR24423 51 68 4.7E-150 T 22-04-2016 SMGD1_RS01540 ce415255613a1287a00c3687b8114154 958 PANTHER PTHR24423 287 420 4.7E-150 T 22-04-2016 SMGD1_RS01540 ce415255613a1287a00c3687b8114154 958 Gene3D G3DSA:1.10.287.130 473 528 1.4E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS01540 ce415255613a1287a00c3687b8114154 958 SUPERFAMILY SSF55785 311 424 3.84E-15 T 22-04-2016 IPR000014 PAS domain SMGD1_RS01540 ce415255613a1287a00c3687b8114154 958 Gene3D G3DSA:3.40.190.10 35 116 4.3E-27 T 22-04-2016 SMGD1_RS01540 ce415255613a1287a00c3687b8114154 958 Gene3D G3DSA:3.40.190.10 220 257 4.3E-27 T 22-04-2016 SMGD1_RS01540 ce415255613a1287a00c3687b8114154 958 Gene3D G3DSA:3.40.190.10 117 219 1.2E-14 T 22-04-2016 SMGD1_RS01540 ce415255613a1287a00c3687b8114154 958 Pfam PF01627 Hpt domain 879 939 3.9E-7 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SMGD1_RS01540 ce415255613a1287a00c3687b8114154 958 Pfam PF13188 PAS domain 306 347 7.7E-5 T 22-04-2016 IPR000014 PAS domain SMGD1_RS01540 ce415255613a1287a00c3687b8114154 958 Gene3D G3DSA:3.40.50.2300 708 832 8.6E-35 T 22-04-2016 SMGD1_RS01540 ce415255613a1287a00c3687b8114154 958 SUPERFAMILY SSF52172 714 833 1.17E-33 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS01540 ce415255613a1287a00c3687b8114154 958 SMART SM00062 39 259 6.3E-22 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SMGD1_RS01540 ce415255613a1287a00c3687b8114154 958 Gene3D G3DSA:3.30.565.10 533 697 7.9E-45 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS01540 ce415255613a1287a00c3687b8114154 958 SMART SM00388 467 532 2.5E-20 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS01540 ce415255613a1287a00c3687b8114154 958 SMART SM00091 306 373 6.2E-8 T 22-04-2016 IPR000014 PAS domain SMGD1_RS01540 ce415255613a1287a00c3687b8114154 958 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 579 694 3.7E-27 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS01540 ce415255613a1287a00c3687b8114154 958 Gene3D G3DSA:3.30.450.20 305 472 2.6E-19 T 22-04-2016 SMGD1_RS01540 ce415255613a1287a00c3687b8114154 958 PRINTS PR00344 Bacterial sensor protein C-terminal signature 655 673 9.2E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS01540 ce415255613a1287a00c3687b8114154 958 PRINTS PR00344 Bacterial sensor protein C-terminal signature 638 648 9.2E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS01540 ce415255613a1287a00c3687b8114154 958 PRINTS PR00344 Bacterial sensor protein C-terminal signature 620 634 9.2E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS01540 ce415255613a1287a00c3687b8114154 958 PRINTS PR00344 Bacterial sensor protein C-terminal signature 679 692 9.2E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS01540 ce415255613a1287a00c3687b8114154 958 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 40 244 1.6E-35 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SMGD1_RS01540 ce415255613a1287a00c3687b8114154 958 Pfam PF00512 His Kinase A (phospho-acceptor) domain 467 532 2.1E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS01540 ce415255613a1287a00c3687b8114154 958 Gene3D G3DSA:1.20.120.160 869 957 2.1E-10 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SMGD1_RS01540 ce415255613a1287a00c3687b8114154 958 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 303 428 5.0E-15 T 22-04-2016 IPR000014 PAS domain SMGD1_RS01540 ce415255613a1287a00c3687b8114154 958 SUPERFAMILY SSF47226 812 824 6.15E-12 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SMGD1_RS01540 ce415255613a1287a00c3687b8114154 958 SUPERFAMILY SSF47226 858 956 6.15E-12 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SMGD1_RS01540 ce415255613a1287a00c3687b8114154 958 SUPERFAMILY SSF53850 33 259 1.66E-44 T 22-04-2016 SMGD1_RS01540 ce415255613a1287a00c3687b8114154 958 SUPERFAMILY SSF47384 454 533 1.31E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS01540 ce415255613a1287a00c3687b8114154 958 SUPERFAMILY SSF55874 521 692 4.32E-43 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS03665 e73957867f1fa3b6cf6baf3823707f46 255 PANTHER PTHR30616 1 251 9.0E-71 T 22-04-2016 SMGD1_RS03665 e73957867f1fa3b6cf6baf3823707f46 255 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 20 247 5.8E-70 T 22-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase SMGD1_RS03665 e73957867f1fa3b6cf6baf3823707f46 255 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 25 249 5.2E-58 T 22-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase SMGD1_RS03665 e73957867f1fa3b6cf6baf3823707f46 255 Gene3D G3DSA:3.60.140.10 6 250 3.3E-78 T 22-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase SMGD1_RS03665 e73957867f1fa3b6cf6baf3823707f46 255 SUPERFAMILY SSF64438 9 250 1.21E-74 T 22-04-2016 IPR011324 Cytotoxic necrotizing factor-like, catalytic SMGD1_RS01665 efe94b9841f98081002152e6fb6c38c4 256 Gene3D G3DSA:3.40.710.10 23 254 3.1E-81 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SMGD1_RS01665 efe94b9841f98081002152e6fb6c38c4 256 ProSitePatterns PS00337 Beta-lactamase class-D active site. 64 74 - T 22-04-2016 IPR002137 Beta-lactamase, class-D active site GO:0008800|GO:0017001 KEGG: 00311+3.5.2.6 SMGD1_RS01665 efe94b9841f98081002152e6fb6c38c4 256 PANTHER PTHR30627 34 256 1.7E-27 T 22-04-2016 SMGD1_RS01665 efe94b9841f98081002152e6fb6c38c4 256 SUPERFAMILY SSF56601 25 251 7.92E-33 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SMGD1_RS01665 efe94b9841f98081002152e6fb6c38c4 256 PANTHER PTHR30627:SF6 34 256 1.7E-27 T 22-04-2016 SMGD1_RS01665 efe94b9841f98081002152e6fb6c38c4 256 Pfam PF00905 Penicillin binding protein transpeptidase domain 43 250 1.5E-35 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 SMGD1_RS13060 c129e053248b5d72060fed12b00ab5c1 557 SUPERFAMILY SSF56801 8 283 8.9E-111 T 22-04-2016 SMGD1_RS13060 c129e053248b5d72060fed12b00ab5c1 557 SUPERFAMILY SSF56801 312 554 8.9E-111 T 22-04-2016 SMGD1_RS13060 c129e053248b5d72060fed12b00ab5c1 557 Gene3D G3DSA:3.30.300.30 447 553 2.7E-7 T 22-04-2016 SMGD1_RS13060 c129e053248b5d72060fed12b00ab5c1 557 Gene3D G3DSA:3.40.50.980 184 359 1.3E-32 T 22-04-2016 SMGD1_RS13060 c129e053248b5d72060fed12b00ab5c1 557 Pfam PF00501 AMP-binding enzyme 17 448 8.6E-98 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 SMGD1_RS13060 c129e053248b5d72060fed12b00ab5c1 557 PANTHER PTHR24096 3 552 1.3E-129 T 22-04-2016 SMGD1_RS13060 c129e053248b5d72060fed12b00ab5c1 557 Gene3D G3DSA:2.30.38.10 372 439 3.0E-22 T 22-04-2016 SMGD1_RS13060 c129e053248b5d72060fed12b00ab5c1 557 ProSitePatterns PS00455 Putative AMP-binding domain signature. 177 188 - T 22-04-2016 IPR020845 AMP-binding, conserved site SMGD1_RS13060 c129e053248b5d72060fed12b00ab5c1 557 Gene3D G3DSA:3.40.50.980 10 183 4.7E-38 T 22-04-2016 SMGD1_RS03440 219117f02e08f9c31e9f193c4ef7be1a 502 SMART SM00471 186 321 5.8E-8 T 22-04-2016 IPR003607 HD/PDEase domain SMGD1_RS03440 219117f02e08f9c31e9f193c4ef7be1a 502 SUPERFAMILY SSF55073 381 460 1.49E-10 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS03440 219117f02e08f9c31e9f193c4ef7be1a 502 SUPERFAMILY SSF109604 175 350 9.95E-38 T 22-04-2016 SMGD1_RS03440 219117f02e08f9c31e9f193c4ef7be1a 502 Gene3D G3DSA:1.10.3210.10 179 352 1.5E-22 T 22-04-2016 IPR006674 HD domain SMGD1_RS03440 219117f02e08f9c31e9f193c4ef7be1a 502 Pfam PF13487 HD domain 242 303 5.1E-21 T 22-04-2016 SMGD1_RS03440 219117f02e08f9c31e9f193c4ef7be1a 502 Gene3D G3DSA:3.30.70.270 378 460 2.7E-11 T 22-04-2016 SMGD1_RS03440 219117f02e08f9c31e9f193c4ef7be1a 502 SMART SM00448 19 130 1.4E-31 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS03440 219117f02e08f9c31e9f193c4ef7be1a 502 PANTHER PTHR26402:SF578 19 136 1.1E-28 T 22-04-2016 SMGD1_RS03440 219117f02e08f9c31e9f193c4ef7be1a 502 TIGRFAM TIGR00277 HDIG: HDIG domain 193 280 7.5E-10 T 22-04-2016 IPR006675 HDIG domain SMGD1_RS03440 219117f02e08f9c31e9f193c4ef7be1a 502 Pfam PF00072 Response regulator receiver domain 21 130 1.2E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS03440 219117f02e08f9c31e9f193c4ef7be1a 502 SUPERFAMILY SSF52172 19 169 2.28E-35 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS03440 219117f02e08f9c31e9f193c4ef7be1a 502 PANTHER PTHR26402 19 136 1.1E-28 T 22-04-2016 SMGD1_RS03440 219117f02e08f9c31e9f193c4ef7be1a 502 Gene3D G3DSA:3.40.50.2300 20 160 4.5E-34 T 22-04-2016 SMGD1_RS03440 219117f02e08f9c31e9f193c4ef7be1a 502 Pfam PF00990 Diguanylate cyclase, GGDEF domain 378 460 1.6E-9 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS06775 b346c6897112f494105444080251b244 356 SUPERFAMILY SSF69055 266 353 1.83E-18 T 22-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 SMGD1_RS06775 b346c6897112f494105444080251b244 356 SUPERFAMILY SSF55347 113 238 1.8E-41 T 22-04-2016 SMGD1_RS06775 b346c6897112f494105444080251b244 356 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1 119 5.8E-34 T 22-04-2016 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 SMGD1_RS06775 b346c6897112f494105444080251b244 356 PIRSF PIRSF006205 1 355 3.8E-115 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 SMGD1_RS06775 b346c6897112f494105444080251b244 356 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1 352 1.4E-113 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 SMGD1_RS06775 b346c6897112f494105444080251b244 356 Gene3D G3DSA:3.40.50.720 1 122 3.7E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS06775 b346c6897112f494105444080251b244 356 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 127 207 6.9E-33 T 22-04-2016 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 SMGD1_RS06775 b346c6897112f494105444080251b244 356 Gene3D G3DSA:1.10.1740.10 278 352 4.1E-17 T 22-04-2016 SMGD1_RS06775 b346c6897112f494105444080251b244 356 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 1 355 38.39 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 SMGD1_RS06775 b346c6897112f494105444080251b244 356 PANTHER PTHR30525 1 352 3.7E-114 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 SMGD1_RS06775 b346c6897112f494105444080251b244 356 SUPERFAMILY SSF51735 2 122 1.34E-27 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS06775 b346c6897112f494105444080251b244 356 PANTHER PTHR30525:SF0 1 352 3.7E-114 T 22-04-2016 SMGD1_RS06775 b346c6897112f494105444080251b244 356 Pfam PF13288 DXP reductoisomerase C-terminal domain 239 350 2.9E-26 T 22-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 SMGD1_RS11980 1bc41a0e5191ea6d3ffc0cb4b2a8f701 415 Pfam PF00464 Serine hydroxymethyltransferase 4 378 1.7E-171 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 SMGD1_RS11980 1bc41a0e5191ea6d3ffc0cb4b2a8f701 415 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 3 411 49.814 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 SMGD1_RS11980 1bc41a0e5191ea6d3ffc0cb4b2a8f701 415 PANTHER PTHR11680 4 415 1.0E-238 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 SMGD1_RS11980 1bc41a0e5191ea6d3ffc0cb4b2a8f701 415 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 217 233 - T 22-04-2016 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0004372|GO:0006544|GO:0006563|GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 SMGD1_RS11980 1bc41a0e5191ea6d3ffc0cb4b2a8f701 415 SUPERFAMILY SSF53383 2 411 1.53E-169 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SMGD1_RS11980 1bc41a0e5191ea6d3ffc0cb4b2a8f701 415 Gene3D G3DSA:3.40.640.10 33 279 1.1E-96 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SMGD1_RS11980 1bc41a0e5191ea6d3ffc0cb4b2a8f701 415 Gene3D G3DSA:3.90.1150.10 280 411 3.2E-50 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SMGD1_RS11980 1bc41a0e5191ea6d3ffc0cb4b2a8f701 415 PIRSF PIRSF000412 1 413 2.1E-159 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 SMGD1_RS04605 add8fd4888b49aa5877036e2956d5bef 282 Pfam PF00348 Polyprenyl synthetase 21 255 2.3E-50 T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 SMGD1_RS04605 add8fd4888b49aa5877036e2956d5bef 282 SUPERFAMILY SSF48576 9 263 3.6E-69 T 22-04-2016 IPR008949 Isoprenoid synthase domain SMGD1_RS04605 add8fd4888b49aa5877036e2956d5bef 282 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 72 88 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 SMGD1_RS04605 add8fd4888b49aa5877036e2956d5bef 282 PANTHER PTHR12001:SF23 23 263 1.5E-74 T 22-04-2016 SMGD1_RS04605 add8fd4888b49aa5877036e2956d5bef 282 Gene3D G3DSA:1.10.600.10 10 266 2.1E-75 T 22-04-2016 IPR008949 Isoprenoid synthase domain SMGD1_RS04605 add8fd4888b49aa5877036e2956d5bef 282 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 201 213 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 SMGD1_RS04605 add8fd4888b49aa5877036e2956d5bef 282 PANTHER PTHR12001 23 263 1.5E-74 T 22-04-2016 IPR017446 Polyprenyl synthetase-related SMGD1_RS13020 cadc808ada88ffd916bf8a2f4f79a8b5 199 SUPERFAMILY SSF52218 1 181 3.05E-32 T 22-04-2016 IPR029039 Flavoprotein-like domain SMGD1_RS13020 cadc808ada88ffd916bf8a2f4f79a8b5 199 Gene3D G3DSA:3.40.50.360 1 187 6.4E-35 T 22-04-2016 IPR029039 Flavoprotein-like domain SMGD1_RS13020 cadc808ada88ffd916bf8a2f4f79a8b5 199 PANTHER PTHR10204 1 175 4.5E-54 T 22-04-2016 SMGD1_RS13020 cadc808ada88ffd916bf8a2f4f79a8b5 199 PANTHER PTHR10204:SF36 1 175 4.5E-54 T 22-04-2016 SMGD1_RS13020 cadc808ada88ffd916bf8a2f4f79a8b5 199 Pfam PF02525 Flavodoxin-like fold 2 174 7.1E-30 T 22-04-2016 IPR003680 Flavodoxin-like fold SMGD1_RS07920 d9b8b9cf96e57dd7aaadc98968a94b81 210 PANTHER PTHR26402:SF578 3 210 8.4E-37 T 22-04-2016 SMGD1_RS07920 d9b8b9cf96e57dd7aaadc98968a94b81 210 Gene3D G3DSA:1.10.10.10 125 210 2.4E-8 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMGD1_RS07920 d9b8b9cf96e57dd7aaadc98968a94b81 210 SUPERFAMILY SSF46894 121 209 1.22E-9 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SMGD1_RS07920 d9b8b9cf96e57dd7aaadc98968a94b81 210 Pfam PF00072 Response regulator receiver domain 5 114 7.3E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS07920 d9b8b9cf96e57dd7aaadc98968a94b81 210 SUPERFAMILY SSF52172 3 122 1.28E-31 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS07920 d9b8b9cf96e57dd7aaadc98968a94b81 210 PANTHER PTHR26402 3 210 8.4E-37 T 22-04-2016 SMGD1_RS07920 d9b8b9cf96e57dd7aaadc98968a94b81 210 SMART SM00448 3 114 1.5E-30 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS07920 d9b8b9cf96e57dd7aaadc98968a94b81 210 SMART SM00862 143 209 0.0089 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMGD1_RS07920 d9b8b9cf96e57dd7aaadc98968a94b81 210 Gene3D G3DSA:3.40.50.2300 2 124 1.9E-30 T 22-04-2016 SMGD1_RS04435 c6c93c1c969da5f1b481c47491d03f92 695 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 694 0.0 T 22-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 SMGD1_RS04435 c6c93c1c969da5f1b481c47491d03f92 695 SUPERFAMILY SSF50447 267 401 1.03E-32 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain SMGD1_RS04435 c6c93c1c969da5f1b481c47491d03f92 695 Gene3D G3DSA:3.30.70.240 601 687 3.5E-36 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain SMGD1_RS04435 c6c93c1c969da5f1b481c47491d03f92 695 Gene3D G3DSA:3.40.50.300 6 288 2.3E-101 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS04435 c6c93c1c969da5f1b481c47491d03f92 695 SMART SM00838 602 689 2.2E-61 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain SMGD1_RS04435 c6c93c1c969da5f1b481c47491d03f92 695 PANTHER PTHR23115 9 177 0.0 T 22-04-2016 SMGD1_RS04435 c6c93c1c969da5f1b481c47491d03f92 695 PANTHER PTHR23115 306 693 0.0 T 22-04-2016 SMGD1_RS04435 c6c93c1c969da5f1b481c47491d03f92 695 PANTHER PTHR23115 257 285 0.0 T 22-04-2016 SMGD1_RS04435 c6c93c1c969da5f1b481c47491d03f92 695 PANTHER PTHR23115:SF66 9 177 0.0 T 22-04-2016 SMGD1_RS04435 c6c93c1c969da5f1b481c47491d03f92 695 PANTHER PTHR23115:SF66 306 693 0.0 T 22-04-2016 SMGD1_RS04435 c6c93c1c969da5f1b481c47491d03f92 695 PANTHER PTHR23115:SF66 257 285 0.0 T 22-04-2016 SMGD1_RS04435 c6c93c1c969da5f1b481c47491d03f92 695 SUPERFAMILY SSF54211 481 601 7.08E-43 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SMGD1_RS04435 c6c93c1c969da5f1b481c47491d03f92 695 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 11 179 1.6E-34 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SMGD1_RS04435 c6c93c1c969da5f1b481c47491d03f92 695 Hamap MF_00054_B Elongation factor G [fusA]. 6 693 106.682 T 22-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 SMGD1_RS04435 c6c93c1c969da5f1b481c47491d03f92 695 SUPERFAMILY SSF54980 406 483 7.55E-25 T 22-04-2016 IPR009022 Elongation factor G, III-V domain SMGD1_RS04435 c6c93c1c969da5f1b481c47491d03f92 695 Pfam PF14492 Elongation Factor G, domain II 406 479 7.0E-35 T 22-04-2016 IPR009022 Elongation factor G, III-V domain SMGD1_RS04435 c6c93c1c969da5f1b481c47491d03f92 695 Pfam PF00679 Elongation factor G C-terminus 603 688 7.8E-34 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain SMGD1_RS04435 c6c93c1c969da5f1b481c47491d03f92 695 SUPERFAMILY SSF52540 6 284 7.77E-102 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS04435 c6c93c1c969da5f1b481c47491d03f92 695 Pfam PF03764 Elongation factor G, domain IV 481 599 3.3E-44 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 SMGD1_RS04435 c6c93c1c969da5f1b481c47491d03f92 695 SUPERFAMILY SSF54980 605 691 2.56E-32 T 22-04-2016 IPR009022 Elongation factor G, III-V domain SMGD1_RS04435 c6c93c1c969da5f1b481c47491d03f92 695 Gene3D G3DSA:3.30.230.10 486 600 1.9E-48 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SMGD1_RS04435 c6c93c1c969da5f1b481c47491d03f92 695 Gene3D G3DSA:3.30.70.870 408 482 4.7E-39 T 22-04-2016 SMGD1_RS04435 c6c93c1c969da5f1b481c47491d03f92 695 Pfam PF00009 Elongation factor Tu GTP binding domain 9 284 5.7E-68 T 22-04-2016 SMGD1_RS04435 c6c93c1c969da5f1b481c47491d03f92 695 Pfam PF03144 Elongation factor Tu domain 2 327 394 2.0E-11 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 SMGD1_RS04435 c6c93c1c969da5f1b481c47491d03f92 695 PRINTS PR00315 GTP-binding elongation factor signature 94 105 2.0E-16 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMGD1_RS04435 c6c93c1c969da5f1b481c47491d03f92 695 PRINTS PR00315 GTP-binding elongation factor signature 130 139 2.0E-16 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMGD1_RS04435 c6c93c1c969da5f1b481c47491d03f92 695 PRINTS PR00315 GTP-binding elongation factor signature 58 66 2.0E-16 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMGD1_RS04435 c6c93c1c969da5f1b481c47491d03f92 695 PRINTS PR00315 GTP-binding elongation factor signature 12 25 2.0E-16 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMGD1_RS04435 c6c93c1c969da5f1b481c47491d03f92 695 PRINTS PR00315 GTP-binding elongation factor signature 78 88 2.0E-16 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMGD1_RS04435 c6c93c1c969da5f1b481c47491d03f92 695 Gene3D G3DSA:2.40.30.10 309 407 3.2E-33 T 22-04-2016 SMGD1_RS04435 c6c93c1c969da5f1b481c47491d03f92 695 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site SMGD1_RS04435 c6c93c1c969da5f1b481c47491d03f92 695 SMART SM00889 482 600 3.9E-65 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 SMGD1_RS04650 50edbfc217aced9b4cc956a003fd58b5 431 Pfam PF02875 Mur ligase family, glutamate ligase domain 281 361 2.0E-20 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SMGD1_RS04650 50edbfc217aced9b4cc956a003fd58b5 431 Gene3D G3DSA:3.90.190.20 285 422 5.1E-48 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SMGD1_RS04650 50edbfc217aced9b4cc956a003fd58b5 431 Pfam PF08245 Mur ligase middle domain 67 259 3.3E-41 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SMGD1_RS04650 50edbfc217aced9b4cc956a003fd58b5 431 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 53 428 1.5E-121 T 22-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 SMGD1_RS04650 50edbfc217aced9b4cc956a003fd58b5 431 PANTHER PTHR23135 53 429 2.1E-116 T 22-04-2016 SMGD1_RS04650 50edbfc217aced9b4cc956a003fd58b5 431 SUPERFAMILY SSF53623 60 279 7.33E-56 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SMGD1_RS04650 50edbfc217aced9b4cc956a003fd58b5 431 PANTHER PTHR23135:SF4 53 429 2.1E-116 T 22-04-2016 SMGD1_RS04650 50edbfc217aced9b4cc956a003fd58b5 431 SUPERFAMILY SSF53244 281 428 1.33E-41 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SMGD1_RS04650 50edbfc217aced9b4cc956a003fd58b5 431 Gene3D G3DSA:3.40.1190.10 61 284 3.2E-55 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SMGD1_RS04650 50edbfc217aced9b4cc956a003fd58b5 431 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 1 428 27.96 T 22-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 SMGD1_RS00740 99a465796865e961a3eb06b97d5f959c 604 PANTHER PTHR30108:SF1 5 486 2.4E-130 T 22-04-2016 SMGD1_RS00740 99a465796865e961a3eb06b97d5f959c 604 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 5 420 1.5E-128 T 22-04-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 SMGD1_RS00740 99a465796865e961a3eb06b97d5f959c 604 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 464 550 2.4E-4 T 22-04-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 SMGD1_RS00740 99a465796865e961a3eb06b97d5f959c 604 Gene3D G3DSA:3.40.1670.10 336 449 1.1E-26 T 22-04-2016 SMGD1_RS00740 99a465796865e961a3eb06b97d5f959c 604 Gene3D G3DSA:3.40.1670.10 466 573 4.2E-20 T 22-04-2016 SMGD1_RS00740 99a465796865e961a3eb06b97d5f959c 604 SUPERFAMILY SSF50475 1 320 2.12E-105 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 SMGD1_RS00740 99a465796865e961a3eb06b97d5f959c 604 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 1 450 5.2E-131 T 22-04-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 SMGD1_RS00740 99a465796865e961a3eb06b97d5f959c 604 TIGRFAM TIGR03701 mena_SCO4490: menaquinone biosynthesis decarboxylase, SCO4490 family 4 443 1.4E-196 T 22-04-2016 IPR022390 4-hydroxybenzoate decarboxylase subunit C GO:0016831 SMGD1_RS00740 99a465796865e961a3eb06b97d5f959c 604 PANTHER PTHR30108 5 486 2.4E-130 T 22-04-2016 SMGD1_RS00740 99a465796865e961a3eb06b97d5f959c 604 SUPERFAMILY SSF143968 462 588 3.79E-10 T 22-04-2016 SMGD1_RS00740 99a465796865e961a3eb06b97d5f959c 604 SUPERFAMILY SSF143968 321 465 7.72E-37 T 22-04-2016 SMGD1_RS02545 927921951265b233c5667f740fa956e0 345 PANTHER PTHR23416 1 297 3.5E-103 T 22-04-2016 SMGD1_RS02545 927921951265b233c5667f740fa956e0 345 Gene3D G3DSA:3.20.20.70 10 271 1.1E-107 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMGD1_RS02545 927921951265b233c5667f740fa956e0 345 SUPERFAMILY SSF51569 11 299 2.51E-91 T 22-04-2016 SMGD1_RS02545 927921951265b233c5667f740fa956e0 345 SMART SM00858 287 345 2.4E-6 T 22-04-2016 IPR013974 SAF domain SMGD1_RS02545 927921951265b233c5667f740fa956e0 345 TIGRFAM TIGR03586 PseI: pseudaminic acid synthase 13 339 5.4E-156 T 22-04-2016 IPR020030 Pseudaminic acid biosynthesis, PseI KEGG: 00520+2.5.1.97|MetaCyc: PWY-6143 SMGD1_RS02545 927921951265b233c5667f740fa956e0 345 SUPERFAMILY SSF51269 283 344 3.77E-18 T 22-04-2016 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal SMGD1_RS02545 927921951265b233c5667f740fa956e0 345 PANTHER PTHR23416:SF62 1 297 3.5E-103 T 22-04-2016 SMGD1_RS02545 927921951265b233c5667f740fa956e0 345 Gene3D G3DSA:3.90.1210.10 288 344 1.6E-24 T 22-04-2016 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal SMGD1_RS02545 927921951265b233c5667f740fa956e0 345 Pfam PF08666 SAF domain 288 343 7.8E-8 T 22-04-2016 IPR013974 SAF domain SMGD1_RS02545 927921951265b233c5667f740fa956e0 345 Pfam PF03102 NeuB family 34 272 6.8E-94 T 22-04-2016 IPR013132 N-acetylneuraminic acid synthase, N-terminal GO:0016051 SMGD1_RS01255 d6de6ad1ac11f8c7a2a0aa30b13bb3f4 1596 SMART SM00490 514 596 3.6E-17 T 22-04-2016 IPR001650 Helicase, C-terminal SMGD1_RS01255 d6de6ad1ac11f8c7a2a0aa30b13bb3f4 1596 Gene3D G3DSA:3.30.420.10 29 94 2.7E-5 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMGD1_RS01255 d6de6ad1ac11f8c7a2a0aa30b13bb3f4 1596 Gene3D G3DSA:3.40.50.300 1413 1474 2.1E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS01255 d6de6ad1ac11f8c7a2a0aa30b13bb3f4 1596 Gene3D G3DSA:3.40.50.300 1244 1334 2.1E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS01255 d6de6ad1ac11f8c7a2a0aa30b13bb3f4 1596 SUPERFAMILY SSF52540 1033 1473 2.71E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS01255 d6de6ad1ac11f8c7a2a0aa30b13bb3f4 1596 Pfam PF13361 UvrD-like helicase C-terminal domain 1376 1469 5.9E-14 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 SMGD1_RS01255 d6de6ad1ac11f8c7a2a0aa30b13bb3f4 1596 Pfam PF13361 UvrD-like helicase C-terminal domain 1236 1332 5.2E-7 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 SMGD1_RS01255 d6de6ad1ac11f8c7a2a0aa30b13bb3f4 1596 PANTHER PTHR13710:SF81 217 616 3.0E-79 T 22-04-2016 SMGD1_RS01255 d6de6ad1ac11f8c7a2a0aa30b13bb3f4 1596 PANTHER PTHR13710:SF81 1543 1557 3.0E-79 T 22-04-2016 SMGD1_RS01255 d6de6ad1ac11f8c7a2a0aa30b13bb3f4 1596 PANTHER PTHR13710:SF81 7 13 3.0E-79 T 22-04-2016 SMGD1_RS01255 d6de6ad1ac11f8c7a2a0aa30b13bb3f4 1596 Pfam PF00271 Helicase conserved C-terminal domain 487 594 8.0E-15 T 22-04-2016 IPR001650 Helicase, C-terminal SMGD1_RS01255 d6de6ad1ac11f8c7a2a0aa30b13bb3f4 1596 PANTHER PTHR13710 217 616 3.0E-79 T 22-04-2016 SMGD1_RS01255 d6de6ad1ac11f8c7a2a0aa30b13bb3f4 1596 PANTHER PTHR13710 1543 1557 3.0E-79 T 22-04-2016 SMGD1_RS01255 d6de6ad1ac11f8c7a2a0aa30b13bb3f4 1596 PANTHER PTHR13710 7 13 3.0E-79 T 22-04-2016 SMGD1_RS01255 d6de6ad1ac11f8c7a2a0aa30b13bb3f4 1596 Pfam PF00270 DEAD/DEAH box helicase 275 448 1.9E-19 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SMGD1_RS01255 d6de6ad1ac11f8c7a2a0aa30b13bb3f4 1596 Gene3D G3DSA:3.40.50.300 242 460 1.5E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS01255 d6de6ad1ac11f8c7a2a0aa30b13bb3f4 1596 SMART SM00487 253 471 3.4E-17 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SMGD1_RS01255 d6de6ad1ac11f8c7a2a0aa30b13bb3f4 1596 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 274 621 9.1E-70 T 22-04-2016 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 SMGD1_RS01255 d6de6ad1ac11f8c7a2a0aa30b13bb3f4 1596 Gene3D G3DSA:3.40.50.300 1034 1243 2.6E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS01255 d6de6ad1ac11f8c7a2a0aa30b13bb3f4 1596 Pfam PF00580 UvrD/REP helicase N-terminal domain 1040 1147 2.1E-16 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 SMGD1_RS01255 d6de6ad1ac11f8c7a2a0aa30b13bb3f4 1596 Pfam PF00580 UvrD/REP helicase N-terminal domain 1154 1222 1.2E-8 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 SMGD1_RS01255 d6de6ad1ac11f8c7a2a0aa30b13bb3f4 1596 Gene3D G3DSA:3.40.50.300 470 652 1.1E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS01255 d6de6ad1ac11f8c7a2a0aa30b13bb3f4 1596 SUPERFAMILY SSF53098 6 131 1.71E-7 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMGD1_RS01255 d6de6ad1ac11f8c7a2a0aa30b13bb3f4 1596 SUPERFAMILY SSF52540 316 613 1.94E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS07135 2becc2565fd9dc5408725c372d30ef5e 306 SUPERFAMILY SSF46689 257 305 1.3E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SMGD1_RS07135 2becc2565fd9dc5408725c372d30ef5e 306 PANTHER PTHR11019 211 302 1.8E-22 T 22-04-2016 SMGD1_RS07135 2becc2565fd9dc5408725c372d30ef5e 306 Pfam PF12833 Helix-turn-helix domain 228 305 1.5E-17 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SMGD1_RS07135 2becc2565fd9dc5408725c372d30ef5e 306 Gene3D G3DSA:1.10.10.60 214 259 4.9E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SMGD1_RS07135 2becc2565fd9dc5408725c372d30ef5e 306 PANTHER PTHR11019:SF61 211 302 1.8E-22 T 22-04-2016 SMGD1_RS07135 2becc2565fd9dc5408725c372d30ef5e 306 SMART SM00342 221 304 5.6E-20 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SMGD1_RS07135 2becc2565fd9dc5408725c372d30ef5e 306 Gene3D G3DSA:1.10.10.60 260 302 5.3E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SMGD1_RS03630 2f7bb3134d0f3b99dad51c487bf9441f 189 ProSitePatterns PS00211 ABC transporters family signature. 118 132 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMGD1_RS03630 2f7bb3134d0f3b99dad51c487bf9441f 189 Gene3D G3DSA:3.40.50.300 3 189 5.0E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS03630 2f7bb3134d0f3b99dad51c487bf9441f 189 Pfam PF00005 ABC transporter 22 146 2.2E-25 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMGD1_RS03630 2f7bb3134d0f3b99dad51c487bf9441f 189 PANTHER PTHR24220 6 189 3.4E-52 T 22-04-2016 SMGD1_RS03630 2f7bb3134d0f3b99dad51c487bf9441f 189 SUPERFAMILY SSF52540 2 189 1.12E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS03630 2f7bb3134d0f3b99dad51c487bf9441f 189 SMART SM00382 30 183 5.7E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain SMGD1_RS13520 1b079f5bbf426c79644ad7c53a051338 210 Gene3D G3DSA:3.40.50.300 20 199 2.8E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS13520 1b079f5bbf426c79644ad7c53a051338 210 SUPERFAMILY SSF52540 24 203 1.21E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS13520 1b079f5bbf426c79644ad7c53a051338 210 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 12 198 26.309 T 22-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 SMGD1_RS13520 1b079f5bbf426c79644ad7c53a051338 210 PANTHER PTHR11649 1 198 1.2E-30 T 22-04-2016 SMGD1_RS13520 1b079f5bbf426c79644ad7c53a051338 210 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 7 192 7.3E-51 T 22-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 SMGD1_RS13520 1b079f5bbf426c79644ad7c53a051338 210 Pfam PF01926 50S ribosome-binding GTPase 27 155 4.5E-18 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SMGD1_RS12985 d5a4e96a74f39a957c3864c6e70fa3df 243 Pfam PF01925 Sulfite exporter TauE/SafE 5 237 1.3E-45 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 SMGD1_RS12985 d5a4e96a74f39a957c3864c6e70fa3df 243 Gene3D G3DSA:1.20.1250.20 7 123 4.9E-4 T 22-04-2016 SMGD1_RS12985 d5a4e96a74f39a957c3864c6e70fa3df 243 PANTHER PTHR30269 1 243 9.2E-43 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 SMGD1_RS01360 d406e3906be69039b11ccca515f5b9db 360 Pfam PF12167 Domain of unknown function (DUF3596) 1 53 2.6E-8 T 22-04-2016 IPR022000 Domain of unknown function (DUF3596) SMGD1_RS01360 d406e3906be69039b11ccca515f5b9db 360 PANTHER PTHR30349 74 318 4.7E-17 T 22-04-2016 SMGD1_RS01360 d406e3906be69039b11ccca515f5b9db 360 Pfam PF00589 Phage integrase family 166 324 4.5E-12 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 SMGD1_RS01360 d406e3906be69039b11ccca515f5b9db 360 SUPERFAMILY SSF56349 64 329 2.74E-39 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 SMGD1_RS01360 d406e3906be69039b11ccca515f5b9db 360 Gene3D G3DSA:1.10.443.10 161 328 1.2E-21 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 SMGD1_RS00090 5bb90c2a67ce4d518e3fef2ecc55bf60 1167 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 306 742 2.4E-172 T 22-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMGD1_RS00090 5bb90c2a67ce4d518e3fef2ecc55bf60 1167 Gene3D G3DSA:1.10.150.280 846 882 3.1E-6 T 22-04-2016 SMGD1_RS00090 5bb90c2a67ce4d518e3fef2ecc55bf60 1167 PANTHER PTHR32294 303 1167 0.0 T 22-04-2016 SMGD1_RS00090 5bb90c2a67ce4d518e3fef2ecc55bf60 1167 PANTHER PTHR32294 1 268 0.0 T 22-04-2016 SMGD1_RS00090 5bb90c2a67ce4d518e3fef2ecc55bf60 1167 PANTHER PTHR32294:SF0 303 1167 0.0 T 22-04-2016 SMGD1_RS00090 5bb90c2a67ce4d518e3fef2ecc55bf60 1167 PANTHER PTHR32294:SF0 1 268 0.0 T 22-04-2016 SMGD1_RS00090 5bb90c2a67ce4d518e3fef2ecc55bf60 1167 Pfam PF14579 Helix-hairpin-helix motif 816 908 3.1E-22 T 22-04-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMGD1_RS00090 5bb90c2a67ce4d518e3fef2ecc55bf60 1167 Pfam PF02811 PHP domain 1 152 5.3E-37 T 22-04-2016 IPR004013 PHP domain GO:0003824 SMGD1_RS00090 5bb90c2a67ce4d518e3fef2ecc55bf60 1167 Gene3D G3DSA:3.20.20.140 1 236 1.2E-33 T 22-04-2016 SMGD1_RS00090 5bb90c2a67ce4d518e3fef2ecc55bf60 1167 SUPERFAMILY SSF89550 2 242 2.75E-24 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 SMGD1_RS00090 5bb90c2a67ce4d518e3fef2ecc55bf60 1167 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 1 1040 0.0 T 22-04-2016 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMGD1_RS14330 571c591d14aa5ec78cc5c3870279e521 474 SUPERFAMILY SSF50156 250 347 1.17E-11 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SMGD1_RS14330 571c591d14aa5ec78cc5c3870279e521 474 Gene3D G3DSA:2.40.10.10 123 220 2.7E-19 T 22-04-2016 SMGD1_RS14330 571c591d14aa5ec78cc5c3870279e521 474 PANTHER PTHR22939:SF87 25 432 3.2E-103 T 22-04-2016 SMGD1_RS14330 571c591d14aa5ec78cc5c3870279e521 474 Gene3D G3DSA:2.40.10.10 22 107 5.8E-15 T 22-04-2016 SMGD1_RS14330 571c591d14aa5ec78cc5c3870279e521 474 Pfam PF13180 PDZ domain 239 327 8.8E-11 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SMGD1_RS14330 571c591d14aa5ec78cc5c3870279e521 474 Pfam PF13365 Trypsin-like peptidase domain 52 189 2.8E-22 T 22-04-2016 SMGD1_RS14330 571c591d14aa5ec78cc5c3870279e521 474 PANTHER PTHR22939 25 432 3.2E-103 T 22-04-2016 SMGD1_RS14330 571c591d14aa5ec78cc5c3870279e521 474 SUPERFAMILY SSF50494 22 219 4.89E-39 T 22-04-2016 IPR009003 Peptidase S1, PA clan SMGD1_RS14330 571c591d14aa5ec78cc5c3870279e521 474 PRINTS PR00834 HtrA/DegQ protease family signature 161 178 1.3E-11 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SMGD1_RS14330 571c591d14aa5ec78cc5c3870279e521 474 PRINTS PR00834 HtrA/DegQ protease family signature 60 72 1.3E-11 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SMGD1_RS14330 571c591d14aa5ec78cc5c3870279e521 474 PRINTS PR00834 HtrA/DegQ protease family signature 266 278 1.3E-11 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SMGD1_RS14330 571c591d14aa5ec78cc5c3870279e521 474 PRINTS PR00834 HtrA/DegQ protease family signature 82 102 1.3E-11 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SMGD1_RS14330 571c591d14aa5ec78cc5c3870279e521 474 Gene3D G3DSA:2.30.42.10 225 335 1.8E-13 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SMGD1_RS02155 6604eba1630feea1e7cf2316ce098907 713 SMART SM00304 383 436 0.0087 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SMGD1_RS02155 6604eba1630feea1e7cf2316ce098907 713 Pfam PF08269 Cache domain 38 335 4.9E-91 T 22-04-2016 IPR004010 Double Cache domain 2 SMGD1_RS02155 6604eba1630feea1e7cf2316ce098907 713 PANTHER PTHR32089 1 340 2.2E-79 T 22-04-2016 SMGD1_RS02155 6604eba1630feea1e7cf2316ce098907 713 PANTHER PTHR32089 357 713 2.2E-79 T 22-04-2016 SMGD1_RS02155 6604eba1630feea1e7cf2316ce098907 713 SUPERFAMILY SSF58104 404 713 2.35E-58 T 22-04-2016 SMGD1_RS02155 6604eba1630feea1e7cf2316ce098907 713 SMART SM00283 448 712 3.2E-41 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SMGD1_RS02155 6604eba1630feea1e7cf2316ce098907 713 SMART SM01049 225 284 2.0E-16 T 22-04-2016 IPR033480 Single Cache domain 2 SMGD1_RS02155 6604eba1630feea1e7cf2316ce098907 713 SMART SM01049 49 173 2.5E-19 T 22-04-2016 IPR033480 Single Cache domain 2 SMGD1_RS02155 6604eba1630feea1e7cf2316ce098907 713 Gene3D G3DSA:3.30.450.20 77 224 4.7E-45 T 22-04-2016 SMGD1_RS02155 6604eba1630feea1e7cf2316ce098907 713 Gene3D G3DSA:3.30.450.20 228 336 6.9E-45 T 22-04-2016 SMGD1_RS02155 6604eba1630feea1e7cf2316ce098907 713 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 508 711 4.1E-41 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SMGD1_RS02155 6604eba1630feea1e7cf2316ce098907 713 Gene3D G3DSA:1.10.287.950 467 672 1.8E-44 T 22-04-2016 SMGD1_RS04580 275ed82cd610dfd657acf052577cf298 308 PIRSF PIRSF028235 1 308 1.2E-152 T 22-04-2016 IPR016877 Uncharacterised conserved protein UCP028235 SMGD1_RS04580 275ed82cd610dfd657acf052577cf298 308 SUPERFAMILY SSF64182 3 304 1.14E-7 T 22-04-2016 SMGD1_RS10395 047a51aafd3d2d98dc87faa87d16fbad 335 Gene3D G3DSA:3.20.20.140 2 332 1.2E-102 T 22-04-2016 SMGD1_RS10395 047a51aafd3d2d98dc87faa87d16fbad 335 PIRSF PIRSF001237 1 334 1.3E-116 T 22-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 SMGD1_RS10395 047a51aafd3d2d98dc87faa87d16fbad 335 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 5 331 1.4E-113 T 22-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 SMGD1_RS10395 047a51aafd3d2d98dc87faa87d16fbad 335 ProSitePatterns PS00482 Dihydroorotase signature 1. 11 19 - T 22-04-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 SMGD1_RS10395 047a51aafd3d2d98dc87faa87d16fbad 335 Pfam PF04909 Amidohydrolase 106 250 1.6E-8 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 SMGD1_RS10395 047a51aafd3d2d98dc87faa87d16fbad 335 SUPERFAMILY SSF51556 1 331 3.41E-109 T 22-04-2016 IPR032466 Metal-dependent hydrolase SMGD1_RS10395 047a51aafd3d2d98dc87faa87d16fbad 335 PANTHER PTHR11647 5 335 5.3E-107 T 22-04-2016 SMGD1_RS10395 047a51aafd3d2d98dc87faa87d16fbad 335 ProSitePatterns PS00483 Dihydroorotase signature 2. 238 249 - T 22-04-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 SMGD1_RS10395 047a51aafd3d2d98dc87faa87d16fbad 335 PANTHER PTHR11647:SF59 5 335 5.3E-107 T 22-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 SMGD1_RS05645 700e5abede3ec6d485deee4534d4fa3c 357 SUPERFAMILY SSF46458 5 162 1.58E-36 T 22-04-2016 IPR009050 Globin-like SMGD1_RS05645 700e5abede3ec6d485deee4534d4fa3c 357 Pfam PF00990 Diguanylate cyclase, GGDEF domain 203 352 4.9E-35 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS05645 700e5abede3ec6d485deee4534d4fa3c 357 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 198 355 1.2E-36 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS05645 700e5abede3ec6d485deee4534d4fa3c 357 Gene3D G3DSA:1.10.490.10 7 163 1.0E-42 T 22-04-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 SMGD1_RS05645 700e5abede3ec6d485deee4534d4fa3c 357 Pfam PF11563 Protoglobin 18 168 1.5E-35 T 22-04-2016 SMGD1_RS05645 700e5abede3ec6d485deee4534d4fa3c 357 PANTHER PTHR10799 92 356 7.7E-17 T 22-04-2016 SMGD1_RS05645 700e5abede3ec6d485deee4534d4fa3c 357 Gene3D G3DSA:3.30.70.270 203 355 1.8E-38 T 22-04-2016 SMGD1_RS05645 700e5abede3ec6d485deee4534d4fa3c 357 SMART SM00267 191 356 7.3E-34 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS05645 700e5abede3ec6d485deee4534d4fa3c 357 SUPERFAMILY SSF55073 207 354 1.33E-35 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS05645 700e5abede3ec6d485deee4534d4fa3c 357 PANTHER PTHR10799:SF710 92 356 7.7E-17 T 22-04-2016 SMGD1_RS04085 72a89e49750567befe180aeb968efb9a 599 PANTHER PTHR24031 91 124 1.6E-46 T 22-04-2016 SMGD1_RS04085 72a89e49750567befe180aeb968efb9a 599 PANTHER PTHR24031 254 544 1.6E-46 T 22-04-2016 SMGD1_RS04085 72a89e49750567befe180aeb968efb9a 599 PANTHER PTHR24031 145 237 1.6E-46 T 22-04-2016 SMGD1_RS04085 72a89e49750567befe180aeb968efb9a 599 Gene3D G3DSA:3.40.50.300 395 565 7.5E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS04085 72a89e49750567befe180aeb968efb9a 599 SUPERFAMILY SSF50249 8 144 7.71E-6 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMGD1_RS04085 72a89e49750567befe180aeb968efb9a 599 SUPERFAMILY SSF52540 328 535 1.52E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS04085 72a89e49750567befe180aeb968efb9a 599 SMART SM00487 220 398 1.2E-24 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SMGD1_RS04085 72a89e49750567befe180aeb968efb9a 599 Pfam PF00271 Helicase conserved C-terminal domain 411 522 1.0E-12 T 22-04-2016 IPR001650 Helicase, C-terminal SMGD1_RS04085 72a89e49750567befe180aeb968efb9a 599 Pfam PF04851 Type III restriction enzyme, res subunit 222 370 1.6E-13 T 22-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 SMGD1_RS04085 72a89e49750567befe180aeb968efb9a 599 SMART SM00490 443 522 4.0E-11 T 22-04-2016 IPR001650 Helicase, C-terminal SMGD1_RS04085 72a89e49750567befe180aeb968efb9a 599 Gene3D G3DSA:3.40.50.300 214 393 3.4E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS04085 72a89e49750567befe180aeb968efb9a 599 PANTHER PTHR24031:SF249 91 124 1.6E-46 T 22-04-2016 SMGD1_RS04085 72a89e49750567befe180aeb968efb9a 599 PANTHER PTHR24031:SF249 254 544 1.6E-46 T 22-04-2016 SMGD1_RS04085 72a89e49750567befe180aeb968efb9a 599 PANTHER PTHR24031:SF249 145 237 1.6E-46 T 22-04-2016 SMGD1_RS04085 72a89e49750567befe180aeb968efb9a 599 SUPERFAMILY SSF52540 171 392 8.71E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS08060 caf6a34c99311b9dd4becead47f5cfaa 285 SUPERFAMILY SSF161098 15 273 1.96E-36 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMGD1_RS08060 caf6a34c99311b9dd4becead47f5cfaa 285 PANTHER PTHR30425 4 283 3.0E-114 T 22-04-2016 SMGD1_RS08060 caf6a34c99311b9dd4becead47f5cfaa 285 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 271 1.6E-16 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMGD1_RS08060 caf6a34c99311b9dd4becead47f5cfaa 285 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 7 280 1.1E-86 T 22-04-2016 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 SMGD1_RS08060 caf6a34c99311b9dd4becead47f5cfaa 285 PANTHER PTHR30425:SF1 4 283 3.0E-114 T 22-04-2016 SMGD1_RS08060 caf6a34c99311b9dd4becead47f5cfaa 285 Gene3D G3DSA:1.10.3720.10 15 282 8.2E-38 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMGD1_RS08025 495704cb7b3759c833e54b64994b2994 304 Gene3D G3DSA:3.30.565.10 154 299 7.9E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS08025 495704cb7b3759c833e54b64994b2994 304 PANTHER PTHR24423 34 299 1.8E-36 T 22-04-2016 SMGD1_RS08025 495704cb7b3759c833e54b64994b2994 304 PANTHER PTHR24423:SF485 34 299 1.8E-36 T 22-04-2016 SMGD1_RS08025 495704cb7b3759c833e54b64994b2994 304 SUPERFAMILY SSF55874 150 299 5.89E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS08025 495704cb7b3759c833e54b64994b2994 304 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 193 301 6.5E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS08025 495704cb7b3759c833e54b64994b2994 304 SMART SM00387 192 303 3.4E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS08025 495704cb7b3759c833e54b64994b2994 304 SUPERFAMILY SSF47384 73 150 3.73E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS08025 495704cb7b3759c833e54b64994b2994 304 PRINTS PR00344 Bacterial sensor protein C-terminal signature 287 300 8.0E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS08025 495704cb7b3759c833e54b64994b2994 304 PRINTS PR00344 Bacterial sensor protein C-terminal signature 233 247 8.0E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS08025 495704cb7b3759c833e54b64994b2994 304 PRINTS PR00344 Bacterial sensor protein C-terminal signature 251 261 8.0E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS08025 495704cb7b3759c833e54b64994b2994 304 PRINTS PR00344 Bacterial sensor protein C-terminal signature 264 282 8.0E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS08025 495704cb7b3759c833e54b64994b2994 304 Gene3D G3DSA:1.10.287.130 76 146 2.1E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS12500 c00ccaf5594a279d86438a1590cef60a 421 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 3 419 3.7E-172 T 22-04-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 SMGD1_RS12500 c00ccaf5594a279d86438a1590cef60a 421 Gene3D G3DSA:3.90.1150.10 285 420 1.7E-46 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SMGD1_RS12500 c00ccaf5594a279d86438a1590cef60a 421 PANTHER PTHR11808 263 421 4.0E-180 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SMGD1_RS12500 c00ccaf5594a279d86438a1590cef60a 421 PANTHER PTHR11808 4 228 4.0E-180 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SMGD1_RS12500 c00ccaf5594a279d86438a1590cef60a 421 PIRSF PIRSF001434 1 421 4.1E-125 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SMGD1_RS12500 c00ccaf5594a279d86438a1590cef60a 421 Gene3D G3DSA:3.40.640.10 2 284 1.5E-102 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SMGD1_RS12500 c00ccaf5594a279d86438a1590cef60a 421 PANTHER PTHR11808:SF12 263 421 4.0E-180 T 22-04-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 SMGD1_RS12500 c00ccaf5594a279d86438a1590cef60a 421 PANTHER PTHR11808:SF12 4 228 4.0E-180 T 22-04-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 SMGD1_RS12500 c00ccaf5594a279d86438a1590cef60a 421 SUPERFAMILY SSF53383 1 420 1.86E-110 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SMGD1_RS12500 c00ccaf5594a279d86438a1590cef60a 421 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 4 419 6.2E-131 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SMGD1_RS02650 eb3c3cd1d3f78d38d7084e89d3ff69d5 410 PIRSF PIRSF031134 1 409 3.4E-133 T 22-04-2016 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|KEGG: 00500+2.7.1.10|MetaCyc: PWY-6754|UniPathway: UPA00904 SMGD1_RS02650 eb3c3cd1d3f78d38d7084e89d3ff69d5 410 Gene3D G3DSA:3.90.1200.10 96 290 1.9E-15 T 22-04-2016 SMGD1_RS02650 eb3c3cd1d3f78d38d7084e89d3ff69d5 410 Pfam PF01636 Phosphotransferase enzyme family 211 272 1.9E-10 T 22-04-2016 IPR002575 Aminoglycoside phosphotransferase SMGD1_RS02650 eb3c3cd1d3f78d38d7084e89d3ff69d5 410 TIGRFAM TIGR01767 MTRK: S-methyl-5-thioribose kinase 34 405 1.2E-102 T 22-04-2016 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|KEGG: 00500+2.7.1.10|MetaCyc: PWY-6754|UniPathway: UPA00904 SMGD1_RS02650 eb3c3cd1d3f78d38d7084e89d3ff69d5 410 PANTHER PTHR34273 1 404 6.0E-134 T 22-04-2016 SMGD1_RS02650 eb3c3cd1d3f78d38d7084e89d3ff69d5 410 SUPERFAMILY SSF56112 2 405 8.82E-77 T 22-04-2016 IPR011009 Protein kinase-like domain SMGD1_RS02650 eb3c3cd1d3f78d38d7084e89d3ff69d5 410 Hamap MF_01683 Methylthioribose kinase [mtnK]. 1 410 152.195 T 22-04-2016 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|KEGG: 00500+2.7.1.10|MetaCyc: PWY-6754|UniPathway: UPA00904 SMGD1_RS00095 fc3d1b79dc93842223dddd6db2cfbdb9 224 SUPERFAMILY SSF52172 1 183 1.77E-24 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS00095 fc3d1b79dc93842223dddd6db2cfbdb9 224 PANTHER PTHR26402 1 224 4.1E-30 T 22-04-2016 SMGD1_RS00095 fc3d1b79dc93842223dddd6db2cfbdb9 224 Gene3D G3DSA:1.10.10.10 129 223 9.1E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMGD1_RS00095 fc3d1b79dc93842223dddd6db2cfbdb9 224 Pfam PF00072 Response regulator receiver domain 3 114 2.9E-17 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS00095 fc3d1b79dc93842223dddd6db2cfbdb9 224 SMART SM00448 1 115 6.0E-17 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS00095 fc3d1b79dc93842223dddd6db2cfbdb9 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 154 221 2.0E-12 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMGD1_RS00095 fc3d1b79dc93842223dddd6db2cfbdb9 224 SMART SM00862 151 221 1.8E-11 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMGD1_RS00095 fc3d1b79dc93842223dddd6db2cfbdb9 224 Gene3D G3DSA:3.40.50.2300 1 120 8.2E-23 T 22-04-2016 SMGD1_RS10980 7581bde06108e11913c86349785155f3 423 PANTHER PTHR11564 176 416 2.1E-63 T 22-04-2016 SMGD1_RS10980 7581bde06108e11913c86349785155f3 423 Gene3D G3DSA:3.40.50.300 215 416 2.2E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS10980 7581bde06108e11913c86349785155f3 423 SMART SM00382 219 379 3.0E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain SMGD1_RS10980 7581bde06108e11913c86349785155f3 423 PANTHER PTHR11564:SF3 176 416 2.1E-63 T 22-04-2016 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 SMGD1_RS10980 7581bde06108e11913c86349785155f3 423 SUPERFAMILY SSF52540 215 416 1.17E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS10980 7581bde06108e11913c86349785155f3 423 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 1 309 6.6E-66 T 22-04-2016 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 SMGD1_RS10980 7581bde06108e11913c86349785155f3 423 Pfam PF00448 SRP54-type protein, GTPase domain 221 415 1.5E-41 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 SMGD1_RS10980 7581bde06108e11913c86349785155f3 423 SMART SM00962 220 416 1.9E-55 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 SMGD1_RS10745 52f390e0115926be6df8667b17260f78 481 Pfam PF13174 Tetratricopeptide repeat 317 340 0.17 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMGD1_RS10745 52f390e0115926be6df8667b17260f78 481 Gene3D G3DSA:1.25.40.10 317 378 1.5E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS10745 52f390e0115926be6df8667b17260f78 481 SUPERFAMILY SSF53300 63 245 2.09E-17 T 22-04-2016 IPR002035 von Willebrand factor, type A SMGD1_RS10745 52f390e0115926be6df8667b17260f78 481 SUPERFAMILY SSF48452 306 379 1.67E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS10745 52f390e0115926be6df8667b17260f78 481 PANTHER PTHR22550 35 316 4.2E-12 T 22-04-2016 SMGD1_RS10745 52f390e0115926be6df8667b17260f78 481 SMART SM00327 61 230 6.0E-8 T 22-04-2016 IPR002035 von Willebrand factor, type A SMGD1_RS10745 52f390e0115926be6df8667b17260f78 481 Pfam PF13519 von Willebrand factor type A domain 64 168 1.3E-13 T 22-04-2016 IPR002035 von Willebrand factor, type A SMGD1_RS10745 52f390e0115926be6df8667b17260f78 481 SMART SM00028 348 381 0.029 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMGD1_RS10745 52f390e0115926be6df8667b17260f78 481 SMART SM00028 313 346 13.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMGD1_RS10745 52f390e0115926be6df8667b17260f78 481 PANTHER PTHR22550:SF8 35 316 4.2E-12 T 22-04-2016 SMGD1_RS09385 124b439d7579c0843935d735ce1e5a51 380 Gene3D G3DSA:3.20.20.20 117 378 2.8E-91 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 SMGD1_RS09385 124b439d7579c0843935d735ce1e5a51 380 Pfam PF00809 Pterin binding enzyme 123 362 1.0E-73 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 SMGD1_RS09385 124b439d7579c0843935d735ce1e5a51 380 PANTHER PTHR20941 122 377 1.4E-89 T 22-04-2016 SMGD1_RS09385 124b439d7579c0843935d735ce1e5a51 380 PIRSF PIRSF000501 1 380 2.9E-144 T 22-04-2016 IPR016227 Dihydropteroate synthase, predicted KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614|UniPathway: UPA00077 SMGD1_RS09385 124b439d7579c0843935d735ce1e5a51 380 PANTHER PTHR20941:SF1 122 377 1.4E-89 T 22-04-2016 SMGD1_RS09385 124b439d7579c0843935d735ce1e5a51 380 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 122 376 1.4E-89 T 22-04-2016 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614|UniPathway: UPA00077 SMGD1_RS09385 124b439d7579c0843935d735ce1e5a51 380 SUPERFAMILY SSF51717 117 377 1.83E-85 T 22-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 SMGD1_RS09385 124b439d7579c0843935d735ce1e5a51 380 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 155 168 - T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 SMGD1_RS09325 109194c63c0ed9fb997f50e6b7a5557b 151 Pfam PF01250 Ribosomal protein S6 3 92 7.2E-28 T 22-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 SMGD1_RS09325 109194c63c0ed9fb997f50e6b7a5557b 151 SUPERFAMILY SSF54995 1 98 5.23E-31 T 22-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 SMGD1_RS09325 109194c63c0ed9fb997f50e6b7a5557b 151 Gene3D G3DSA:3.30.70.60 1 96 8.0E-33 T 22-04-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 SMGD1_RS09325 109194c63c0ed9fb997f50e6b7a5557b 151 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 94 6.3E-27 T 22-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 SMGD1_RS09325 109194c63c0ed9fb997f50e6b7a5557b 151 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 95 20.885 T 22-04-2016 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 SMGD1_RS09325 109194c63c0ed9fb997f50e6b7a5557b 151 PANTHER PTHR21011 1 134 2.6E-29 T 22-04-2016 SMGD1_RS14340 2c67941aaec225bed8838e5c8bc4c803 672 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 48 60 1.8E-32 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SMGD1_RS14340 2c67941aaec225bed8838e5c8bc4c803 672 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 389 408 1.8E-32 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SMGD1_RS14340 2c67941aaec225bed8838e5c8bc4c803 672 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 313 329 1.8E-32 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SMGD1_RS14340 2c67941aaec225bed8838e5c8bc4c803 672 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 6 19 1.8E-32 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SMGD1_RS14340 2c67941aaec225bed8838e5c8bc4c803 672 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 242 257 1.8E-32 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SMGD1_RS14340 2c67941aaec225bed8838e5c8bc4c803 672 PANTHER PTHR30075 1 672 3.9E-237 T 22-04-2016 SMGD1_RS14340 2c67941aaec225bed8838e5c8bc4c803 672 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 5 538 4.0E-189 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SMGD1_RS14340 2c67941aaec225bed8838e5c8bc4c803 672 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 2 670 23.165 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SMGD1_RS14340 2c67941aaec225bed8838e5c8bc4c803 672 SUPERFAMILY SSF109604 357 519 3.77E-6 T 22-04-2016 SMGD1_RS14340 2c67941aaec225bed8838e5c8bc4c803 672 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 3 670 8.6E-219 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SMGD1_RS14340 2c67941aaec225bed8838e5c8bc4c803 672 PANTHER PTHR30075:SF2 1 672 3.9E-237 T 22-04-2016 SMGD1_RS13495 a4741c198f204dafeafee0ab468f1b54 139 SUPERFAMILY SSF55486 5 135 4.54E-33 T 22-04-2016 SMGD1_RS13495 a4741c198f204dafeafee0ab468f1b54 139 Pfam PF02130 Uncharacterized protein family UPF0054 16 126 1.5E-32 T 22-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 SMGD1_RS13495 a4741c198f204dafeafee0ab468f1b54 139 PANTHER PTHR22881 28 127 1.9E-24 T 22-04-2016 SMGD1_RS13495 a4741c198f204dafeafee0ab468f1b54 139 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 99 109 - T 22-04-2016 IPR020549 Endoribonuclease YbeY, conserved site SMGD1_RS13495 a4741c198f204dafeafee0ab468f1b54 139 Gene3D G3DSA:3.40.390.30 23 137 8.4E-38 T 22-04-2016 IPR023091 Metalloprotease catalytic domain, predicted GO:0004222 SMGD1_RS13495 a4741c198f204dafeafee0ab468f1b54 139 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 1 131 20.15 T 22-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 SMGD1_RS13495 a4741c198f204dafeafee0ab468f1b54 139 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 28 127 4.6E-28 T 22-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 SMGD1_RS04930 7cdc5a4906c2db9dc6e86469aa48ec2f 93 Pfam PF00276 Ribosomal protein L23 7 89 2.7E-17 T 22-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 SMGD1_RS04930 7cdc5a4906c2db9dc6e86469aa48ec2f 93 SUPERFAMILY SSF54189 7 89 5.76E-21 T 22-04-2016 IPR012678 Ribosomal protein L23/L15e core domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS04930 7cdc5a4906c2db9dc6e86469aa48ec2f 93 Gene3D G3DSA:3.30.70.330 7 90 1.9E-19 T 22-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 SMGD1_RS04930 7cdc5a4906c2db9dc6e86469aa48ec2f 93 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 4 93 13.347 T 22-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 SMGD1_RS13550 4757c06bc5661ad7f0f8aee4abbee071 379 SMART SM00257 208 255 0.79 T 22-04-2016 IPR018392 LysM domain SMGD1_RS13550 4757c06bc5661ad7f0f8aee4abbee071 379 SMART SM00257 335 378 2.7E-13 T 22-04-2016 IPR018392 LysM domain SMGD1_RS13550 4757c06bc5661ad7f0f8aee4abbee071 379 SMART SM00257 277 320 1.0E-9 T 22-04-2016 IPR018392 LysM domain SMGD1_RS13550 4757c06bc5661ad7f0f8aee4abbee071 379 SUPERFAMILY SSF54106 276 321 9.81E-9 T 22-04-2016 IPR018392 LysM domain SMGD1_RS13550 4757c06bc5661ad7f0f8aee4abbee071 379 Gene3D G3DSA:1.10.530.10 41 184 1.7E-41 T 22-04-2016 SMGD1_RS13550 4757c06bc5661ad7f0f8aee4abbee071 379 Pfam PF01464 Transglycosylase SLT domain 52 153 1.2E-26 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 SMGD1_RS13550 4757c06bc5661ad7f0f8aee4abbee071 379 PANTHER PTHR21666 17 379 9.0E-46 T 22-04-2016 SMGD1_RS13550 4757c06bc5661ad7f0f8aee4abbee071 379 Pfam PF01476 LysM domain 278 320 8.1E-8 T 22-04-2016 IPR018392 LysM domain SMGD1_RS13550 4757c06bc5661ad7f0f8aee4abbee071 379 Pfam PF01476 LysM domain 336 377 1.1E-10 T 22-04-2016 IPR018392 LysM domain SMGD1_RS13550 4757c06bc5661ad7f0f8aee4abbee071 379 Pfam PF01476 LysM domain 213 239 0.058 T 22-04-2016 IPR018392 LysM domain SMGD1_RS13550 4757c06bc5661ad7f0f8aee4abbee071 379 PANTHER PTHR21666:SF206 17 379 9.0E-46 T 22-04-2016 SMGD1_RS13550 4757c06bc5661ad7f0f8aee4abbee071 379 Gene3D G3DSA:3.10.350.10 335 377 1.7E-14 T 22-04-2016 IPR018392 LysM domain SMGD1_RS13550 4757c06bc5661ad7f0f8aee4abbee071 379 Gene3D G3DSA:3.10.350.10 276 320 2.4E-11 T 22-04-2016 IPR018392 LysM domain SMGD1_RS13550 4757c06bc5661ad7f0f8aee4abbee071 379 SUPERFAMILY SSF53955 42 182 5.98E-36 T 22-04-2016 IPR023346 Lysozyme-like domain SMGD1_RS13550 4757c06bc5661ad7f0f8aee4abbee071 379 SUPERFAMILY SSF54106 334 377 5.36E-9 T 22-04-2016 IPR018392 LysM domain SMGD1_RS07560 a08773f3a57da5d820d9c2b96416bc93 230 PANTHER PTHR10422 17 157 2.2E-47 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SMGD1_RS07560 a08773f3a57da5d820d9c2b96416bc93 230 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 3 229 3.3E-80 T 22-04-2016 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO SMGD1_RS07560 a08773f3a57da5d820d9c2b96416bc93 230 Gene3D G3DSA:1.10.760.10 15 151 5.8E-23 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS07560 a08773f3a57da5d820d9c2b96416bc93 230 Gene3D G3DSA:1.10.760.10 204 226 5.8E-23 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS07560 a08773f3a57da5d820d9c2b96416bc93 230 SUPERFAMILY SSF46626 17 151 2.36E-20 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS07560 a08773f3a57da5d820d9c2b96416bc93 230 SUPERFAMILY SSF46626 199 226 2.36E-20 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS07560 a08773f3a57da5d820d9c2b96416bc93 230 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 3 229 1.8E-83 T 22-04-2016 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO SMGD1_RS07560 a08773f3a57da5d820d9c2b96416bc93 230 PANTHER PTHR10422:SF23 17 157 2.2E-47 T 22-04-2016 SMGD1_RS12860 316b2d90444d45d25ad6a93f7e442e6b 608 PANTHER PTHR10434 335 583 1.8E-26 T 22-04-2016 SMGD1_RS12860 316b2d90444d45d25ad6a93f7e442e6b 608 Gene3D G3DSA:1.20.1250.20 232 408 1.0E-8 T 22-04-2016 SMGD1_RS12860 316b2d90444d45d25ad6a93f7e442e6b 608 SUPERFAMILY SSF69593 393 601 1.44E-24 T 22-04-2016 SMGD1_RS12860 316b2d90444d45d25ad6a93f7e442e6b 608 Pfam PF01553 Acyltransferase 432 537 3.2E-17 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 SMGD1_RS12860 316b2d90444d45d25ad6a93f7e442e6b 608 Pfam PF07690 Major Facilitator Superfamily 40 372 1.6E-9 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SMGD1_RS12860 316b2d90444d45d25ad6a93f7e442e6b 608 SUPERFAMILY SSF103473 6 409 8.63E-21 T 22-04-2016 IPR020846 Major facilitator superfamily domain SMGD1_RS12860 316b2d90444d45d25ad6a93f7e442e6b 608 SMART SM00563 445 556 4.0E-18 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 SMGD1_RS12860 316b2d90444d45d25ad6a93f7e442e6b 608 PANTHER PTHR10434:SF15 335 583 1.8E-26 T 22-04-2016 SMGD1_RS12860 316b2d90444d45d25ad6a93f7e442e6b 608 Gene3D G3DSA:3.40.1130.10 416 532 3.4E-12 T 22-04-2016 SMGD1_RS02555 a0f0bb221e168071b2ebd0b8f859896a 499 Pfam PF00583 Acetyltransferase (GNAT) family 399 475 2.4E-4 T 22-04-2016 IPR000182 GNAT domain GO:0008080 SMGD1_RS02555 a0f0bb221e168071b2ebd0b8f859896a 499 Gene3D G3DSA:3.40.630.30 334 490 1.5E-18 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMGD1_RS02555 a0f0bb221e168071b2ebd0b8f859896a 499 TIGRFAM TIGR03590 PseG: UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase 7 290 4.5E-91 T 22-04-2016 IPR020023 UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase SMGD1_RS02555 a0f0bb221e168071b2ebd0b8f859896a 499 Gene3D G3DSA:3.40.50.2000 176 314 6.1E-11 T 22-04-2016 SMGD1_RS02555 a0f0bb221e168071b2ebd0b8f859896a 499 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 184 316 8.2E-7 T 22-04-2016 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SMGD1_RS02555 a0f0bb221e168071b2ebd0b8f859896a 499 SUPERFAMILY SSF53756 184 315 5.84E-6 T 22-04-2016 SMGD1_RS02555 a0f0bb221e168071b2ebd0b8f859896a 499 SUPERFAMILY SSF55729 335 490 1.1E-13 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMGD1_RS12885 a4251cbae391edc9ab5d518897c36642 377 PANTHER PTHR11482 5 377 3.5E-175 T 22-04-2016 SMGD1_RS12885 a4251cbae391edc9ab5d518897c36642 377 SUPERFAMILY SSF51419 16 248 2.18E-42 T 22-04-2016 IPR029066 PLP-binding barrel SMGD1_RS12885 a4251cbae391edc9ab5d518897c36642 377 Gene3D G3DSA:3.20.20.10 32 238 7.1E-16 T 22-04-2016 IPR029066 PLP-binding barrel SMGD1_RS12885 a4251cbae391edc9ab5d518897c36642 377 PANTHER PTHR11482:SF38 5 377 3.5E-175 T 22-04-2016 SMGD1_RS12885 a4251cbae391edc9ab5d518897c36642 377 Gene3D G3DSA:2.40.37.10 239 354 8.6E-23 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 SMGD1_RS12885 a4251cbae391edc9ab5d518897c36642 377 TIGRFAM TIGR01047 nspC: carboxynorspermidine decarboxylase 7 376 3.0E-166 T 22-04-2016 IPR005730 Carboxynorspermidine decarboxylase KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 SMGD1_RS12885 a4251cbae391edc9ab5d518897c36642 377 SUPERFAMILY SSF50621 214 366 5.86E-32 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 SMGD1_RS12885 a4251cbae391edc9ab5d518897c36642 377 PIRSF PIRSF038941 1 377 2.4E-187 T 22-04-2016 IPR005730 Carboxynorspermidine decarboxylase KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 SMGD1_RS12885 a4251cbae391edc9ab5d518897c36642 377 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 264 351 2.2E-7 T 22-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 SMGD1_RS07285 2cc5d6572c6cd59ed4b739e7860259f2 310 Gene3D G3DSA:3.30.1490.20 103 175 2.5E-7 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SMGD1_RS07285 2cc5d6572c6cd59ed4b739e7860259f2 310 TIGRFAM TIGR00768 rimK_fam: alpha-L-glutamate ligase, RimK family 4 286 2.6E-71 T 22-04-2016 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GO:0006464 SMGD1_RS07285 2cc5d6572c6cd59ed4b739e7860259f2 310 Gene3D G3DSA:3.40.50.20 8 102 1.8E-11 T 22-04-2016 IPR016185 Pre-ATP-grasp domain SMGD1_RS07285 2cc5d6572c6cd59ed4b739e7860259f2 310 PANTHER PTHR21621:SF0 1 290 1.2E-99 T 22-04-2016 SMGD1_RS07285 2cc5d6572c6cd59ed4b739e7860259f2 310 PANTHER PTHR21621 1 290 1.2E-99 T 22-04-2016 SMGD1_RS07285 2cc5d6572c6cd59ed4b739e7860259f2 310 Pfam PF08443 RimK-like ATP-grasp domain 98 286 1.1E-61 T 22-04-2016 IPR013651 ATP-grasp fold, RimK-type SMGD1_RS07285 2cc5d6572c6cd59ed4b739e7860259f2 310 Gene3D G3DSA:3.30.470.20 176 277 6.4E-35 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SMGD1_RS07285 2cc5d6572c6cd59ed4b739e7860259f2 310 SUPERFAMILY SSF56059 98 289 1.68E-49 T 22-04-2016 SMGD1_RS06000 c9848c85386d81ec7830838b98f2531e 446 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 2 131 2.0E-43 T 22-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMGD1_RS06000 c9848c85386d81ec7830838b98f2531e 446 SUPERFAMILY SSF53738 157 258 4.32E-29 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMGD1_RS06000 c9848c85386d81ec7830838b98f2531e 446 Gene3D G3DSA:3.40.120.10 2 145 6.7E-44 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMGD1_RS06000 c9848c85386d81ec7830838b98f2531e 446 SUPERFAMILY SSF55957 361 445 1.96E-12 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMGD1_RS06000 c9848c85386d81ec7830838b98f2531e 446 SUPERFAMILY SSF53738 2 182 1.61E-45 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMGD1_RS06000 c9848c85386d81ec7830838b98f2531e 446 PANTHER PTHR22573:SF15 1 438 1.2E-136 T 22-04-2016 SMGD1_RS06000 c9848c85386d81ec7830838b98f2531e 446 Gene3D G3DSA:3.40.120.10 177 251 2.2E-23 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMGD1_RS06000 c9848c85386d81ec7830838b98f2531e 446 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 158 255 2.5E-19 T 22-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMGD1_RS06000 c9848c85386d81ec7830838b98f2531e 446 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 395 437 6.8E-7 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMGD1_RS06000 c9848c85386d81ec7830838b98f2531e 446 Gene3D G3DSA:3.40.120.10 252 363 4.3E-34 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMGD1_RS06000 c9848c85386d81ec7830838b98f2531e 446 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 4 439 1.5E-154 T 22-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMGD1_RS06000 c9848c85386d81ec7830838b98f2531e 446 SUPERFAMILY SSF53738 259 366 1.22E-27 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMGD1_RS06000 c9848c85386d81ec7830838b98f2531e 446 PANTHER PTHR22573 1 438 1.2E-136 T 22-04-2016 SMGD1_RS06000 c9848c85386d81ec7830838b98f2531e 446 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 1 443 40.974 T 22-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMGD1_RS06000 c9848c85386d81ec7830838b98f2531e 446 Gene3D G3DSA:3.30.310.50 364 439 4.1E-8 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMGD1_RS06000 c9848c85386d81ec7830838b98f2531e 446 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 259 365 2.1E-29 T 22-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMGD1_RS06000 c9848c85386d81ec7830838b98f2531e 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 235 250 4.2E-11 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMGD1_RS06000 c9848c85386d81ec7830838b98f2531e 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 175 194 4.2E-11 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMGD1_RS06000 c9848c85386d81ec7830838b98f2531e 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 92 106 4.2E-11 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMGD1_RS03185 5d539a51b6cf88c513bc1420135044c8 868 Pfam PF12770 CHAT domain 567 867 2.5E-53 T 22-04-2016 IPR024983 CHAT domain SMGD1_RS07775 37ab0f125274d931a23b38aebc69fd9c 66 SUPERFAMILY SSF143800 1 64 1.06E-22 T 22-04-2016 SMGD1_RS07775 37ab0f125274d931a23b38aebc69fd9c 66 Pfam PF01197 Ribosomal protein L31 1 64 1.1E-27 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS07775 37ab0f125274d931a23b38aebc69fd9c 66 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 65 1.2E-28 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS07775 37ab0f125274d931a23b38aebc69fd9c 66 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 66 26.492 T 22-04-2016 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS07775 37ab0f125274d931a23b38aebc69fd9c 66 PANTHER PTHR33280 1 64 1.7E-27 T 22-04-2016 SMGD1_RS07775 37ab0f125274d931a23b38aebc69fd9c 66 ProSitePatterns PS01143 Ribosomal protein L31 signature. 34 55 - T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS07775 37ab0f125274d931a23b38aebc69fd9c 66 PRINTS PR01249 Ribosomal protein L31 signature 30 45 1.9E-18 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS07775 37ab0f125274d931a23b38aebc69fd9c 66 PRINTS PR01249 Ribosomal protein L31 signature 45 63 1.9E-18 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS07775 37ab0f125274d931a23b38aebc69fd9c 66 PRINTS PR01249 Ribosomal protein L31 signature 2 19 1.9E-18 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS07775 37ab0f125274d931a23b38aebc69fd9c 66 PANTHER PTHR33280:SF2 1 64 1.7E-27 T 22-04-2016 SMGD1_RS09350 511dfcf24e1b901863d5ed222bef2f27 136 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 78 3.5E-21 T 22-04-2016 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 SMGD1_RS09350 511dfcf24e1b901863d5ed222bef2f27 136 Pfam PF02416 mttA/Hcf106 family 4 27 2.2E-4 T 22-04-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 SMGD1_RS09350 511dfcf24e1b901863d5ed222bef2f27 136 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 3.1E-14 T 22-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 SMGD1_RS09350 511dfcf24e1b901863d5ed222bef2f27 136 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 3.1E-14 T 22-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 SMGD1_RS09350 511dfcf24e1b901863d5ed222bef2f27 136 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 3.1E-14 T 22-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 SMGD1_RS09350 511dfcf24e1b901863d5ed222bef2f27 136 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 135 14.053 T 22-04-2016 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 SMGD1_RS09065 ace2cbcf0b8a7bb2fb972d78532c075e 662 SUPERFAMILY SSF55073 510 661 1.26E-46 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS09065 ace2cbcf0b8a7bb2fb972d78532c075e 662 SMART SM00091 134 201 0.088 T 22-04-2016 IPR000014 PAS domain SMGD1_RS09065 ace2cbcf0b8a7bb2fb972d78532c075e 662 SMART SM00091 260 324 0.0032 T 22-04-2016 IPR000014 PAS domain SMGD1_RS09065 ace2cbcf0b8a7bb2fb972d78532c075e 662 SMART SM00091 7 76 19.0 T 22-04-2016 IPR000014 PAS domain SMGD1_RS09065 ace2cbcf0b8a7bb2fb972d78532c075e 662 SMART SM00091 380 446 6.1E-4 T 22-04-2016 IPR000014 PAS domain SMGD1_RS09065 ace2cbcf0b8a7bb2fb972d78532c075e 662 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 501 660 4.1E-49 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS09065 ace2cbcf0b8a7bb2fb972d78532c075e 662 Pfam PF13426 PAS domain 26 66 0.4 T 22-04-2016 IPR000014 PAS domain SMGD1_RS09065 ace2cbcf0b8a7bb2fb972d78532c075e 662 Gene3D G3DSA:3.30.450.20 389 493 1.1E-23 T 22-04-2016 SMGD1_RS09065 ace2cbcf0b8a7bb2fb972d78532c075e 662 SUPERFAMILY SSF55785 139 248 1.94E-17 T 22-04-2016 IPR000014 PAS domain SMGD1_RS09065 ace2cbcf0b8a7bb2fb972d78532c075e 662 PANTHER PTHR10799 269 446 5.6E-31 T 22-04-2016 SMGD1_RS09065 ace2cbcf0b8a7bb2fb972d78532c075e 662 PANTHER PTHR10799 538 662 5.6E-31 T 22-04-2016 SMGD1_RS09065 ace2cbcf0b8a7bb2fb972d78532c075e 662 SUPERFAMILY SSF55785 245 370 1.35E-19 T 22-04-2016 IPR000014 PAS domain SMGD1_RS09065 ace2cbcf0b8a7bb2fb972d78532c075e 662 Pfam PF08448 PAS fold 140 249 5.2E-8 T 22-04-2016 IPR013656 PAS fold-4 SMGD1_RS09065 ace2cbcf0b8a7bb2fb972d78532c075e 662 Pfam PF00990 Diguanylate cyclase, GGDEF domain 505 658 7.0E-44 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS09065 ace2cbcf0b8a7bb2fb972d78532c075e 662 Gene3D G3DSA:3.30.70.270 507 661 3.1E-51 T 22-04-2016 SMGD1_RS09065 ace2cbcf0b8a7bb2fb972d78532c075e 662 PANTHER PTHR10799:SF750 269 446 5.6E-31 T 22-04-2016 SMGD1_RS09065 ace2cbcf0b8a7bb2fb972d78532c075e 662 PANTHER PTHR10799:SF750 538 662 5.6E-31 T 22-04-2016 SMGD1_RS09065 ace2cbcf0b8a7bb2fb972d78532c075e 662 Pfam PF13188 PAS domain 260 300 2.9E-6 T 22-04-2016 IPR000014 PAS domain SMGD1_RS09065 ace2cbcf0b8a7bb2fb972d78532c075e 662 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 135 250 1.8E-15 T 22-04-2016 IPR000014 PAS domain SMGD1_RS09065 ace2cbcf0b8a7bb2fb972d78532c075e 662 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 256 379 1.8E-21 T 22-04-2016 IPR000014 PAS domain SMGD1_RS09065 ace2cbcf0b8a7bb2fb972d78532c075e 662 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 377 501 2.9E-20 T 22-04-2016 IPR000014 PAS domain SMGD1_RS09065 ace2cbcf0b8a7bb2fb972d78532c075e 662 SUPERFAMILY SSF55785 16 111 1.71E-5 T 22-04-2016 IPR000014 PAS domain SMGD1_RS09065 ace2cbcf0b8a7bb2fb972d78532c075e 662 Pfam PF00989 PAS fold 383 491 3.6E-14 T 22-04-2016 IPR013767 PAS fold GO:0006355 SMGD1_RS09065 ace2cbcf0b8a7bb2fb972d78532c075e 662 Gene3D G3DSA:3.30.450.20 246 370 2.9E-19 T 22-04-2016 SMGD1_RS09065 ace2cbcf0b8a7bb2fb972d78532c075e 662 SMART SM00267 494 662 3.6E-58 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS09065 ace2cbcf0b8a7bb2fb972d78532c075e 662 SMART SM00086 208 248 19.0 T 22-04-2016 IPR001610 PAC motif SMGD1_RS09065 ace2cbcf0b8a7bb2fb972d78532c075e 662 SMART SM00086 452 494 3.6E-7 T 22-04-2016 IPR001610 PAC motif SMGD1_RS09065 ace2cbcf0b8a7bb2fb972d78532c075e 662 SMART SM00086 332 372 330.0 T 22-04-2016 IPR001610 PAC motif SMGD1_RS09065 ace2cbcf0b8a7bb2fb972d78532c075e 662 SUPERFAMILY SSF55785 387 494 7.78E-24 T 22-04-2016 IPR000014 PAS domain SMGD1_RS09065 ace2cbcf0b8a7bb2fb972d78532c075e 662 Gene3D G3DSA:3.30.450.20 139 245 5.6E-15 T 22-04-2016 SMGD1_RS09065 ace2cbcf0b8a7bb2fb972d78532c075e 662 Gene3D G3DSA:3.30.450.20 13 112 2.2E-6 T 22-04-2016 SMGD1_RS07850 75d6b0e33fa62b7ee649904ffff1c2b0 159 Gene3D G3DSA:3.30.450.20 22 110 1.4E-22 T 22-04-2016 SMGD1_RS07850 75d6b0e33fa62b7ee649904ffff1c2b0 159 SUPERFAMILY SSF55785 19 112 2.42E-27 T 22-04-2016 IPR000014 PAS domain SMGD1_RS07850 75d6b0e33fa62b7ee649904ffff1c2b0 159 Pfam PF08447 PAS fold 30 113 3.1E-19 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 SMGD1_RS07850 75d6b0e33fa62b7ee649904ffff1c2b0 159 PANTHER PTHR32089 1 114 9.0E-26 T 22-04-2016 SMGD1_RS07850 75d6b0e33fa62b7ee649904ffff1c2b0 159 PANTHER PTHR32089:SF52 1 114 9.0E-26 T 22-04-2016 SMGD1_RS07850 75d6b0e33fa62b7ee649904ffff1c2b0 159 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 23 124 3.6E-15 T 22-04-2016 IPR000014 PAS domain SMGD1_RS08650 ce7d6e49443132c106c839478d147700 247 Pfam PF00929 Exonuclease 6 142 2.1E-15 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III SMGD1_RS08650 ce7d6e49443132c106c839478d147700 247 Gene3D G3DSA:3.30.420.10 3 175 3.1E-31 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMGD1_RS08650 ce7d6e49443132c106c839478d147700 247 PANTHER PTHR30231 5 165 2.3E-17 T 22-04-2016 SMGD1_RS08650 ce7d6e49443132c106c839478d147700 247 SUPERFAMILY SSF53098 4 216 6.17E-29 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMGD1_RS08650 ce7d6e49443132c106c839478d147700 247 SMART SM00479 4 178 5.0E-17 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III SMGD1_RS13840 0aae440d88d0bcb67f8e4ab3a4b6dd88 209 PANTHER PTHR20855 7 209 2.5E-54 T 22-04-2016 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 SMGD1_RS13840 0aae440d88d0bcb67f8e4ab3a4b6dd88 209 Pfam PF03006 Haemolysin-III related 4 201 5.8E-38 T 22-04-2016 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 SMGD1_RS13840 0aae440d88d0bcb67f8e4ab3a4b6dd88 209 PANTHER PTHR20855:SF3 7 209 2.5E-54 T 22-04-2016 IPR005744 Hly-III GO:0016021|GO:0019835 SMGD1_RS13840 0aae440d88d0bcb67f8e4ab3a4b6dd88 209 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 8 208 1.8E-59 T 22-04-2016 IPR005744 Hly-III GO:0016021|GO:0019835 SMGD1_RS07335 07f550cf7731207534865939bc92a745 355 SMART SM00450 1 130 0.0022 T 22-04-2016 IPR001763 Rhodanese-like domain SMGD1_RS07335 07f550cf7731207534865939bc92a745 355 PANTHER PTHR30401:SF0 5 354 1.8E-121 T 22-04-2016 SMGD1_RS07335 07f550cf7731207534865939bc92a745 355 PANTHER PTHR30401 5 354 1.8E-121 T 22-04-2016 SMGD1_RS07335 07f550cf7731207534865939bc92a745 355 SUPERFAMILY SSF52821 90 135 1.65E-19 T 22-04-2016 IPR001763 Rhodanese-like domain SMGD1_RS07335 07f550cf7731207534865939bc92a745 355 SUPERFAMILY SSF52821 11 62 1.65E-19 T 22-04-2016 IPR001763 Rhodanese-like domain SMGD1_RS07335 07f550cf7731207534865939bc92a745 355 Gene3D G3DSA:3.40.250.10 12 127 4.2E-28 T 22-04-2016 IPR001763 Rhodanese-like domain SMGD1_RS07335 07f550cf7731207534865939bc92a745 355 TIGRFAM TIGR03167 tRNA_sel_U_synt: tRNA 2-selenouridine synthase 13 339 2.6E-102 T 22-04-2016 IPR017582 tRNA 2-selenouridine synthase GO:0016785|GO:0043828|GO:0070329 SMGD1_RS07335 07f550cf7731207534865939bc92a745 355 Hamap MF_01622 tRNA 2-selenouridine synthase [selU]. 1 354 45.16 T 22-04-2016 IPR017582 tRNA 2-selenouridine synthase GO:0016785|GO:0043828|GO:0070329 SMGD1_RS09595 748e8625f3f074f17e1013b09ff1b134 319 PANTHER PTHR13697 1 312 5.8E-103 T 22-04-2016 SMGD1_RS09595 748e8625f3f074f17e1013b09ff1b134 319 Gene3D G3DSA:3.40.50.450 1 190 9.4E-62 T 22-04-2016 SMGD1_RS09595 748e8625f3f074f17e1013b09ff1b134 319 ProSitePatterns PS00433 Phosphofructokinase signature. 245 263 - T 22-04-2016 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SMGD1_RS09595 748e8625f3f074f17e1013b09ff1b134 319 PIRSF PIRSF000532 1 318 5.5E-96 T 22-04-2016 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|UniPathway: UPA00109 SMGD1_RS09595 748e8625f3f074f17e1013b09ff1b134 319 SUPERFAMILY SSF53784 2 311 2.75E-95 T 22-04-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SMGD1_RS09595 748e8625f3f074f17e1013b09ff1b134 319 Pfam PF00365 Phosphofructokinase 3 275 2.8E-95 T 22-04-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SMGD1_RS09595 748e8625f3f074f17e1013b09ff1b134 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 213 225 1.9E-64 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SMGD1_RS09595 748e8625f3f074f17e1013b09ff1b134 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 93 109 1.9E-64 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SMGD1_RS09595 748e8625f3f074f17e1013b09ff1b134 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 6 25 1.9E-64 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SMGD1_RS09595 748e8625f3f074f17e1013b09ff1b134 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 31 44 1.9E-64 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SMGD1_RS09595 748e8625f3f074f17e1013b09ff1b134 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 241 263 1.9E-64 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SMGD1_RS09595 748e8625f3f074f17e1013b09ff1b134 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 177 194 1.9E-64 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SMGD1_RS09595 748e8625f3f074f17e1013b09ff1b134 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 139 157 1.9E-64 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SMGD1_RS09595 748e8625f3f074f17e1013b09ff1b134 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 159 175 1.9E-64 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SMGD1_RS09595 748e8625f3f074f17e1013b09ff1b134 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 121 138 1.9E-64 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SMGD1_RS09595 748e8625f3f074f17e1013b09ff1b134 319 PANTHER PTHR13697:SF4 1 312 5.8E-103 T 22-04-2016 SMGD1_RS07250 d8538f2d318ad1937ceb631c28a06af4 406 Pfam PF00512 His Kinase A (phospho-acceptor) domain 200 261 3.6E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS07250 d8538f2d318ad1937ceb631c28a06af4 406 Gene3D G3DSA:3.30.450.40 42 193 1.7E-14 T 22-04-2016 IPR029016 GAF domain-like SMGD1_RS07250 d8538f2d318ad1937ceb631c28a06af4 406 Gene3D G3DSA:1.10.287.130 194 257 1.1E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS07250 d8538f2d318ad1937ceb631c28a06af4 406 SUPERFAMILY SSF55874 253 392 1.44E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS07250 d8538f2d318ad1937ceb631c28a06af4 406 SUPERFAMILY SSF47384 184 265 3.73E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS07250 d8538f2d318ad1937ceb631c28a06af4 406 Pfam PF01590 GAF domain 92 181 6.1E-7 T 22-04-2016 IPR003018 GAF domain GO:0005515 SMGD1_RS07250 d8538f2d318ad1937ceb631c28a06af4 406 SUPERFAMILY SSF55781 46 195 2.26E-16 T 22-04-2016 IPR029016 GAF domain-like SMGD1_RS07250 d8538f2d318ad1937ceb631c28a06af4 406 SMART SM00388 198 264 6.4E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS07250 d8538f2d318ad1937ceb631c28a06af4 406 SMART SM00065 45 193 0.0021 T 22-04-2016 IPR003018 GAF domain GO:0005515 SMGD1_RS07250 d8538f2d318ad1937ceb631c28a06af4 406 PANTHER PTHR24423 185 385 1.4E-39 T 22-04-2016 SMGD1_RS07250 d8538f2d318ad1937ceb631c28a06af4 406 Gene3D G3DSA:3.30.565.10 265 396 2.0E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS09225 5b7c534f0fd692e46f25bc4eab792551 663 SUPERFAMILY SSF140990 429 617 2.22E-58 T 22-04-2016 SMGD1_RS09225 5b7c534f0fd692e46f25bc4eab792551 663 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 213 345 5.4E-42 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SMGD1_RS09225 5b7c534f0fd692e46f25bc4eab792551 663 SUPERFAMILY SSF52540 172 444 1.81E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS09225 5b7c534f0fd692e46f25bc4eab792551 663 Gene3D G3DSA:3.40.50.300 170 355 1.1E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS09225 5b7c534f0fd692e46f25bc4eab792551 663 PANTHER PTHR23076 2 663 2.3E-262 T 22-04-2016 SMGD1_RS09225 5b7c534f0fd692e46f25bc4eab792551 663 PANTHER PTHR23076:SF10 2 663 2.3E-262 T 22-04-2016 SMGD1_RS09225 5b7c534f0fd692e46f25bc4eab792551 663 Pfam PF01434 Peptidase family M41 408 616 3.6E-68 T 22-04-2016 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 SMGD1_RS09225 5b7c534f0fd692e46f25bc4eab792551 663 ProSitePatterns PS00674 AAA-protein family signature. 317 335 - T 22-04-2016 IPR003960 ATPase, AAA-type, conserved site GO:0005524 SMGD1_RS09225 5b7c534f0fd692e46f25bc4eab792551 663 Gene3D G3DSA:1.10.8.60 356 422 2.5E-23 T 22-04-2016 SMGD1_RS09225 5b7c534f0fd692e46f25bc4eab792551 663 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 15 625 34.137 T 22-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 SMGD1_RS09225 5b7c534f0fd692e46f25bc4eab792551 663 Pfam PF06480 FtsH Extracellular 23 119 4.9E-8 T 22-04-2016 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 SMGD1_RS09225 5b7c534f0fd692e46f25bc4eab792551 663 SMART SM00382 209 349 1.3E-23 T 22-04-2016 IPR003593 AAA+ ATPase domain SMGD1_RS09225 5b7c534f0fd692e46f25bc4eab792551 663 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 124 617 6.9E-214 T 22-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 SMGD1_RS05715 09dd37d032699250ad5a4572f9f6dff0 414 SUPERFAMILY SSF109604 186 408 3.77E-24 T 22-04-2016 SMGD1_RS05715 09dd37d032699250ad5a4572f9f6dff0 414 PIRSF PIRSF003180 1 412 2.6E-86 T 22-04-2016 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing SMGD1_RS05715 09dd37d032699250ad5a4572f9f6dff0 414 SMART SM00052 2 199 0.0017 T 22-04-2016 IPR001633 EAL domain SMGD1_RS05715 09dd37d032699250ad5a4572f9f6dff0 414 PANTHER PTHR33525 3 365 7.4E-59 T 22-04-2016 SMGD1_RS05715 09dd37d032699250ad5a4572f9f6dff0 414 Pfam PF08668 HDOD domain 218 334 1.8E-9 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD SMGD1_RS05715 09dd37d032699250ad5a4572f9f6dff0 414 Gene3D G3DSA:1.10.3150.10 187 357 1.0E-22 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD SMGD1_RS05715 09dd37d032699250ad5a4572f9f6dff0 414 Pfam PF00563 EAL domain 72 194 5.2E-10 T 22-04-2016 IPR001633 EAL domain SMGD1_RS05715 09dd37d032699250ad5a4572f9f6dff0 414 SUPERFAMILY SSF141868 3 201 7.19E-23 T 22-04-2016 IPR001633 EAL domain SMGD1_RS05715 09dd37d032699250ad5a4572f9f6dff0 414 PANTHER PTHR33525:SF4 3 365 7.4E-59 T 22-04-2016 SMGD1_RS05715 09dd37d032699250ad5a4572f9f6dff0 414 Gene3D G3DSA:3.20.20.450 94 186 3.7E-8 T 22-04-2016 IPR001633 EAL domain SMGD1_RS00085 34861ebe6b087a0004aa9194aeb55c46 419 PANTHER PTHR28570 2 418 3.4E-156 T 22-04-2016 SMGD1_RS00085 34861ebe6b087a0004aa9194aeb55c46 419 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 107 127 5.2E-42 T 22-04-2016 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 SMGD1_RS00085 34861ebe6b087a0004aa9194aeb55c46 419 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 143 160 5.2E-42 T 22-04-2016 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 SMGD1_RS00085 34861ebe6b087a0004aa9194aeb55c46 419 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 297 313 5.2E-42 T 22-04-2016 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 SMGD1_RS00085 34861ebe6b087a0004aa9194aeb55c46 419 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 386 401 5.2E-42 T 22-04-2016 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 SMGD1_RS00085 34861ebe6b087a0004aa9194aeb55c46 419 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 258 276 5.2E-42 T 22-04-2016 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 SMGD1_RS00085 34861ebe6b087a0004aa9194aeb55c46 419 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 74 90 5.2E-42 T 22-04-2016 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 SMGD1_RS00085 34861ebe6b087a0004aa9194aeb55c46 419 SUPERFAMILY SSF101821 86 208 6.13E-30 T 22-04-2016 SMGD1_RS00085 34861ebe6b087a0004aa9194aeb55c46 419 SUPERFAMILY SSF53187 210 418 1.18E-95 T 22-04-2016 SMGD1_RS00085 34861ebe6b087a0004aa9194aeb55c46 419 SUPERFAMILY SSF53187 4 85 1.18E-95 T 22-04-2016 SMGD1_RS00085 34861ebe6b087a0004aa9194aeb55c46 419 Gene3D G3DSA:3.40.630.10 219 418 5.1E-106 T 22-04-2016 SMGD1_RS00085 34861ebe6b087a0004aa9194aeb55c46 419 Gene3D G3DSA:3.40.630.10 5 84 5.1E-106 T 22-04-2016 SMGD1_RS00085 34861ebe6b087a0004aa9194aeb55c46 419 Pfam PF02127 Aminopeptidase I zinc metalloprotease (M18) 13 417 7.3E-125 T 22-04-2016 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 SMGD1_RS00085 34861ebe6b087a0004aa9194aeb55c46 419 Gene3D G3DSA:2.30.250.10 85 216 7.8E-37 T 22-04-2016 IPR023358 Peptidase M18, domain 2 GO:0004177 SMGD1_RS06705 f0cf4f992f2d69faadb6bd9c06a0764a 210 Pfam PF00881 Nitroreductase family 15 179 7.3E-26 T 22-04-2016 IPR029479 Nitroreductase SMGD1_RS06705 f0cf4f992f2d69faadb6bd9c06a0764a 210 SUPERFAMILY SSF55469 6 209 9.55E-41 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 SMGD1_RS06705 f0cf4f992f2d69faadb6bd9c06a0764a 210 Gene3D G3DSA:3.40.109.10 6 208 7.7E-40 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 SMGD1_RS06705 f0cf4f992f2d69faadb6bd9c06a0764a 210 TIGRFAM TIGR02476 BluB: 5,6-dimethylbenzimidazole synthase 4 203 6.5E-63 T 22-04-2016 IPR012825 5,6-dimethylbenzimidazole synthase BluB KEGG: 00740+1.13.11.79|MetaCyc: PWY-5508|MetaCyc: PWY-5523 SMGD1_RS06705 f0cf4f992f2d69faadb6bd9c06a0764a 210 PANTHER PTHR23026 9 182 6.3E-24 T 22-04-2016 SMGD1_RS02870 fd141189b847f46c8e2299afd5a45356 755 PANTHER PTHR32089:SF1 250 755 2.7E-66 T 22-04-2016 SMGD1_RS02870 fd141189b847f46c8e2299afd5a45356 755 SUPERFAMILY SSF58104 446 754 2.35E-53 T 22-04-2016 SMGD1_RS02870 fd141189b847f46c8e2299afd5a45356 755 SMART SM00304 424 478 1.0E-5 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SMGD1_RS02870 fd141189b847f46c8e2299afd5a45356 755 PANTHER PTHR32089 250 755 2.7E-66 T 22-04-2016 SMGD1_RS02870 fd141189b847f46c8e2299afd5a45356 755 Pfam PF00672 HAMP domain 404 473 5.2E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SMGD1_RS02870 fd141189b847f46c8e2299afd5a45356 755 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 559 752 8.9E-42 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SMGD1_RS02870 fd141189b847f46c8e2299afd5a45356 755 Gene3D G3DSA:3.30.450.20 255 401 4.1E-4 T 22-04-2016 SMGD1_RS02870 fd141189b847f46c8e2299afd5a45356 755 Gene3D G3DSA:1.10.287.950 513 725 2.1E-40 T 22-04-2016 SMGD1_RS02870 fd141189b847f46c8e2299afd5a45356 755 SMART SM00283 493 754 2.3E-33 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SMGD1_RS08860 004a333d98bbd311613489c7dde205e1 278 Gene3D G3DSA:2.30.30.60 124 172 9.1E-17 T 22-04-2016 SMGD1_RS08860 004a333d98bbd311613489c7dde205e1 278 Gene3D G3DSA:3.30.70.100 176 259 4.3E-20 T 22-04-2016 SMGD1_RS08860 004a333d98bbd311613489c7dde205e1 278 SUPERFAMILY SSF82861 23 107 8.24E-16 T 22-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 SMGD1_RS08860 004a333d98bbd311613489c7dde205e1 278 PANTHER PTHR30221:SF7 6 270 3.3E-64 T 22-04-2016 SMGD1_RS08860 004a333d98bbd311613489c7dde205e1 278 Pfam PF00924 Mechanosensitive ion channel 66 261 2.7E-47 T 22-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 SMGD1_RS08860 004a333d98bbd311613489c7dde205e1 278 SUPERFAMILY SSF50182 109 172 3.6E-17 T 22-04-2016 IPR010920 LSM domain SMGD1_RS08860 004a333d98bbd311613489c7dde205e1 278 SUPERFAMILY SSF82689 174 271 6.02E-27 T 22-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 SMGD1_RS08860 004a333d98bbd311613489c7dde205e1 278 PANTHER PTHR30221 6 270 3.3E-64 T 22-04-2016 SMGD1_RS08860 004a333d98bbd311613489c7dde205e1 278 Pfam PF05552 Conserved TM helix 16 59 1.4E-7 T 22-04-2016 IPR008910 Conserved TM helix SMGD1_RS07780 08e6c946c205a1c8434bc670a8794c7c 272 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 1 269 6.0E-76 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SMGD1_RS07780 08e6c946c205a1c8434bc670a8794c7c 272 Gene3D G3DSA:3.30.950.10 117 224 5.5E-31 T 22-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 SMGD1_RS07780 08e6c946c205a1c8434bc670a8794c7c 272 PIRSF PIRSF005917 1 272 2.3E-82 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SMGD1_RS07780 08e6c946c205a1c8434bc670a8794c7c 272 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 3 207 1.3E-24 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 SMGD1_RS07780 08e6c946c205a1c8434bc670a8794c7c 272 PANTHER PTHR21091 2 228 3.1E-53 T 22-04-2016 SMGD1_RS07780 08e6c946c205a1c8434bc670a8794c7c 272 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 1 225 33.074 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SMGD1_RS07780 08e6c946c205a1c8434bc670a8794c7c 272 PANTHER PTHR21091:SF18 2 228 3.1E-53 T 22-04-2016 SMGD1_RS07780 08e6c946c205a1c8434bc670a8794c7c 272 Gene3D G3DSA:3.40.1010.10 2 116 2.4E-10 T 22-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 SMGD1_RS07780 08e6c946c205a1c8434bc670a8794c7c 272 SUPERFAMILY SSF53790 2 223 1.96E-63 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 SMGD1_RS07780 08e6c946c205a1c8434bc670a8794c7c 272 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 86 97 - T 22-04-2016 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SMGD1_RS07500 0ba864352ee14a00b9dc37728649f168 437 Gene3D G3DSA:1.20.1250.20 4 182 6.8E-35 T 22-04-2016 SMGD1_RS07500 0ba864352ee14a00b9dc37728649f168 437 Gene3D G3DSA:1.20.1250.20 197 384 2.4E-20 T 22-04-2016 SMGD1_RS07500 0ba864352ee14a00b9dc37728649f168 437 PANTHER PTHR23504 8 413 1.9E-93 T 22-04-2016 SMGD1_RS07500 0ba864352ee14a00b9dc37728649f168 437 PANTHER PTHR23504:SF37 8 413 1.9E-93 T 22-04-2016 SMGD1_RS07500 0ba864352ee14a00b9dc37728649f168 437 SUPERFAMILY SSF103473 5 382 3.14E-61 T 22-04-2016 IPR020846 Major facilitator superfamily domain SMGD1_RS07500 0ba864352ee14a00b9dc37728649f168 437 Pfam PF07690 Major Facilitator Superfamily 12 342 6.8E-46 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SMGD1_RS05065 f81dc8fcac9b9a259fa168c531d0d85d 453 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 11 187 1.5E-36 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 SMGD1_RS05065 f81dc8fcac9b9a259fa168c531d0d85d 453 PANTHER PTHR12592 5 451 1.1E-68 T 22-04-2016 SMGD1_RS05065 f81dc8fcac9b9a259fa168c531d0d85d 453 PANTHER PTHR12592:SF0 5 451 1.1E-68 T 22-04-2016 SMGD1_RS05065 f81dc8fcac9b9a259fa168c531d0d85d 453 Pfam PF03853 YjeF-related protein N-terminus 24 164 8.2E-25 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 SMGD1_RS05065 f81dc8fcac9b9a259fa168c531d0d85d 453 Pfam PF01256 Carbohydrate kinase 227 450 6.5E-44 T 22-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 SMGD1_RS05065 f81dc8fcac9b9a259fa168c531d0d85d 453 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 396 406 - T 22-04-2016 IPR017953 Carbohydrate kinase, predicted, conserved site SMGD1_RS05065 f81dc8fcac9b9a259fa168c531d0d85d 453 SUPERFAMILY SSF64153 10 193 1.27E-42 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 SMGD1_RS05065 f81dc8fcac9b9a259fa168c531d0d85d 453 SUPERFAMILY SSF53613 207 452 1.19E-46 T 22-04-2016 IPR029056 Ribokinase-like SMGD1_RS05065 f81dc8fcac9b9a259fa168c531d0d85d 453 PIRSF PIRSF017184 4 453 1.8E-102 T 22-04-2016 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 SMGD1_RS05065 f81dc8fcac9b9a259fa168c531d0d85d 453 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 199 452 15.744 T 22-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 SMGD1_RS05065 f81dc8fcac9b9a259fa168c531d0d85d 453 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 204 451 6.7E-49 T 22-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 SMGD1_RS05065 f81dc8fcac9b9a259fa168c531d0d85d 453 Gene3D G3DSA:3.40.50.10260 7 208 3.2E-45 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 SMGD1_RS05065 f81dc8fcac9b9a259fa168c531d0d85d 453 Gene3D G3DSA:3.40.1190.20 209 452 1.8E-55 T 22-04-2016 IPR029056 Ribokinase-like SMGD1_RS08005 2ea812c7d652c3a151e38ffe399ca2d2 228 SUPERFAMILY SSF46894 141 225 3.97E-13 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SMGD1_RS08005 2ea812c7d652c3a151e38ffe399ca2d2 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 225 1.3E-10 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMGD1_RS08005 2ea812c7d652c3a151e38ffe399ca2d2 228 PANTHER PTHR26402 11 225 7.3E-35 T 22-04-2016 SMGD1_RS08005 2ea812c7d652c3a151e38ffe399ca2d2 228 Gene3D G3DSA:3.40.50.2300 11 158 1.3E-29 T 22-04-2016 SMGD1_RS08005 2ea812c7d652c3a151e38ffe399ca2d2 228 SMART SM00862 156 225 1.3E-9 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMGD1_RS08005 2ea812c7d652c3a151e38ffe399ca2d2 228 Pfam PF00072 Response regulator receiver domain 13 122 5.0E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS08005 2ea812c7d652c3a151e38ffe399ca2d2 228 SMART SM00448 11 122 1.9E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS08005 2ea812c7d652c3a151e38ffe399ca2d2 228 SUPERFAMILY SSF52172 11 159 5.83E-30 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS08005 2ea812c7d652c3a151e38ffe399ca2d2 228 Gene3D G3DSA:1.10.10.10 159 226 9.5E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMGD1_RS01415 2bfd3b98e3897933f68599ae7ee81a63 489 PANTHER PTHR10314:SF1 57 344 6.4E-98 T 22-04-2016 SMGD1_RS01415 2bfd3b98e3897933f68599ae7ee81a63 489 PANTHER PTHR10314:SF1 374 479 6.4E-98 T 22-04-2016 SMGD1_RS01415 2bfd3b98e3897933f68599ae7ee81a63 489 PANTHER PTHR10314:SF1 29 40 6.4E-98 T 22-04-2016 SMGD1_RS01415 2bfd3b98e3897933f68599ae7ee81a63 489 PANTHER PTHR10314 57 344 6.4E-98 T 22-04-2016 SMGD1_RS01415 2bfd3b98e3897933f68599ae7ee81a63 489 PANTHER PTHR10314 374 479 6.4E-98 T 22-04-2016 SMGD1_RS01415 2bfd3b98e3897933f68599ae7ee81a63 489 PANTHER PTHR10314 29 40 6.4E-98 T 22-04-2016 SMGD1_RS01415 2bfd3b98e3897933f68599ae7ee81a63 489 Pfam PF14821 Threonine synthase N terminus 3 75 4.9E-11 T 22-04-2016 IPR029144 Threonine synthase, N-terminal SMGD1_RS01415 2bfd3b98e3897933f68599ae7ee81a63 489 Gene3D G3DSA:3.40.50.1100 205 442 3.9E-75 T 22-04-2016 SMGD1_RS01415 2bfd3b98e3897933f68599ae7ee81a63 489 Gene3D G3DSA:3.40.50.1100 134 204 2.3E-5 T 22-04-2016 SMGD1_RS01415 2bfd3b98e3897933f68599ae7ee81a63 489 TIGRFAM TIGR00260 thrC: threonine synthase 71 439 3.6E-79 T 22-04-2016 IPR004450 Threonine synthase-like SMGD1_RS01415 2bfd3b98e3897933f68599ae7ee81a63 489 SUPERFAMILY SSF53686 1 486 6.28E-128 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SMGD1_RS01415 2bfd3b98e3897933f68599ae7ee81a63 489 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 100 371 2.2E-9 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SMGD1_RS01415 2bfd3b98e3897933f68599ae7ee81a63 489 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 105 119 - T 22-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 SMGD1_RS01415 2bfd3b98e3897933f68599ae7ee81a63 489 Gene3D G3DSA:3.90.1380.10 1 86 5.2E-20 T 22-04-2016 IPR029144 Threonine synthase, N-terminal SMGD1_RS04800 916d9235694aff1152046eda1b0883fd 184 SUPERFAMILY SSF46767 95 175 8.11E-27 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 SMGD1_RS04800 916d9235694aff1152046eda1b0883fd 184 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 146 152 - T 22-04-2016 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 SMGD1_RS04800 916d9235694aff1152046eda1b0883fd 184 PANTHER PTHR10815 7 175 2.2E-40 T 22-04-2016 SMGD1_RS04800 916d9235694aff1152046eda1b0883fd 184 SUPERFAMILY SSF53155 20 83 1.55E-13 T 22-04-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 SMGD1_RS04800 916d9235694aff1152046eda1b0883fd 184 Gene3D G3DSA:3.30.160.70 9 87 6.1E-20 T 22-04-2016 SMGD1_RS04800 916d9235694aff1152046eda1b0883fd 184 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 96 175 5.7E-31 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 SMGD1_RS04800 916d9235694aff1152046eda1b0883fd 184 Gene3D G3DSA:1.10.10.10 94 177 6.1E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMGD1_RS04800 916d9235694aff1152046eda1b0883fd 184 PANTHER PTHR10815:SF5 7 175 2.2E-40 T 22-04-2016 SMGD1_RS04800 916d9235694aff1152046eda1b0883fd 184 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 98 175 1.8E-26 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 SMGD1_RS00615 979dadb7a3a2d148aa6ab498b1b5469a 262 SUPERFAMILY SSF53927 7 260 1.77E-72 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 SMGD1_RS00615 979dadb7a3a2d148aa6ab498b1b5469a 262 Gene3D G3DSA:3.40.140.10 127 261 2.2E-47 T 22-04-2016 SMGD1_RS00615 979dadb7a3a2d148aa6ab498b1b5469a 262 PANTHER PTHR30592 1 260 8.0E-69 T 22-04-2016 SMGD1_RS00615 979dadb7a3a2d148aa6ab498b1b5469a 262 PIRSF PIRSF015626 1 262 1.0E-80 T 22-04-2016 IPR003786 Protein FdhD GO:0016783 SMGD1_RS00615 979dadb7a3a2d148aa6ab498b1b5469a 262 Hamap MF_00187 Protein FdhD [fdhD]. 5 261 29.771 T 22-04-2016 IPR003786 Protein FdhD GO:0016783 SMGD1_RS00615 979dadb7a3a2d148aa6ab498b1b5469a 262 PANTHER PTHR30592:SF1 1 260 8.0E-69 T 22-04-2016 SMGD1_RS00615 979dadb7a3a2d148aa6ab498b1b5469a 262 Pfam PF02634 FdhD/NarQ family 28 261 8.3E-73 T 22-04-2016 IPR003786 Protein FdhD GO:0016783 SMGD1_RS00615 979dadb7a3a2d148aa6ab498b1b5469a 262 Gene3D G3DSA:3.10.20.10 30 111 7.5E-18 T 22-04-2016 SMGD1_RS00615 979dadb7a3a2d148aa6ab498b1b5469a 262 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 24 261 2.6E-55 T 22-04-2016 IPR003786 Protein FdhD GO:0016783 SMGD1_RS08610 0a6e1c212965f6151c3be61a1c8f0a1e 531 Pfam PF05746 DALR anticodon binding domain 412 526 3.6E-26 T 22-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 SMGD1_RS08610 0a6e1c212965f6151c3be61a1c8f0a1e 531 Hamap MF_00123 Arginine--tRNA ligase [argS]. 3 526 23.277 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SMGD1_RS08610 0a6e1c212965f6151c3be61a1c8f0a1e 531 SMART SM00836 412 526 1.0E-34 T 22-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 SMGD1_RS08610 0a6e1c212965f6151c3be61a1c8f0a1e 531 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 114 123 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMGD1_RS08610 0a6e1c212965f6151c3be61a1c8f0a1e 531 Pfam PF00750 tRNA synthetases class I (R) 90 388 2.4E-22 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SMGD1_RS08610 0a6e1c212965f6151c3be61a1c8f0a1e 531 SMART SM01016 3 77 1.8E-25 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SMGD1_RS08610 0a6e1c212965f6151c3be61a1c8f0a1e 531 Gene3D G3DSA:3.30.1360.70 7 91 8.6E-24 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SMGD1_RS08610 0a6e1c212965f6151c3be61a1c8f0a1e 531 Gene3D G3DSA:3.40.50.620 99 415 1.8E-84 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMGD1_RS08610 0a6e1c212965f6151c3be61a1c8f0a1e 531 SUPERFAMILY SSF52374 100 421 2.09E-77 T 22-04-2016 SMGD1_RS08610 0a6e1c212965f6151c3be61a1c8f0a1e 531 SUPERFAMILY SSF47323 406 526 7.19E-25 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMGD1_RS08610 0a6e1c212965f6151c3be61a1c8f0a1e 531 PANTHER PTHR11956 1 526 2.6E-152 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SMGD1_RS08610 0a6e1c212965f6151c3be61a1c8f0a1e 531 Gene3D G3DSA:1.10.730.10 416 526 5.4E-27 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMGD1_RS08610 0a6e1c212965f6151c3be61a1c8f0a1e 531 PANTHER PTHR11956:SF6 1 526 2.6E-152 T 22-04-2016 SMGD1_RS08610 0a6e1c212965f6151c3be61a1c8f0a1e 531 PRINTS PR01038 Arginyl-tRNA synthetase signature 104 119 1.1E-22 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SMGD1_RS08610 0a6e1c212965f6151c3be61a1c8f0a1e 531 PRINTS PR01038 Arginyl-tRNA synthetase signature 281 302 1.1E-22 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SMGD1_RS08610 0a6e1c212965f6151c3be61a1c8f0a1e 531 PRINTS PR01038 Arginyl-tRNA synthetase signature 143 156 1.1E-22 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SMGD1_RS08610 0a6e1c212965f6151c3be61a1c8f0a1e 531 PRINTS PR01038 Arginyl-tRNA synthetase signature 119 135 1.1E-22 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SMGD1_RS08610 0a6e1c212965f6151c3be61a1c8f0a1e 531 SUPERFAMILY SSF55190 8 84 6.8E-19 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SMGD1_RS08610 0a6e1c212965f6151c3be61a1c8f0a1e 531 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 2 526 1.2E-134 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SMGD1_RS08610 0a6e1c212965f6151c3be61a1c8f0a1e 531 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 5 77 7.8E-18 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SMGD1_RS10680 f76b0815771c0b8401819c5b336ba0d9 382 SMART SM00382 154 297 9.5E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain SMGD1_RS10680 f76b0815771c0b8401819c5b336ba0d9 382 Pfam PF00158 Sigma-54 interaction domain 135 300 1.7E-67 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 SMGD1_RS10680 f76b0815771c0b8401819c5b336ba0d9 382 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 158 171 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 SMGD1_RS10680 f76b0815771c0b8401819c5b336ba0d9 382 Gene3D G3DSA:3.40.50.300 131 306 6.3E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS10680 f76b0815771c0b8401819c5b336ba0d9 382 Gene3D G3DSA:1.10.8.60 307 376 3.5E-20 T 22-04-2016 SMGD1_RS10680 f76b0815771c0b8401819c5b336ba0d9 382 PANTHER PTHR32071 1 375 8.0E-158 T 22-04-2016 SMGD1_RS10680 f76b0815771c0b8401819c5b336ba0d9 382 SMART SM00448 1 109 3.3E-30 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS10680 f76b0815771c0b8401819c5b336ba0d9 382 Gene3D G3DSA:3.40.50.2300 2 122 3.2E-29 T 22-04-2016 SMGD1_RS10680 f76b0815771c0b8401819c5b336ba0d9 382 SUPERFAMILY SSF52540 134 375 2.9E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS10680 f76b0815771c0b8401819c5b336ba0d9 382 Pfam PF00072 Response regulator receiver domain 3 110 7.0E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS10680 f76b0815771c0b8401819c5b336ba0d9 382 SUPERFAMILY SSF52172 2 179 2.7E-31 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS10680 f76b0815771c0b8401819c5b336ba0d9 382 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 220 235 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 SMGD1_RS02750 daec5c40cdd680edea93e91d632b7c82 662 Pfam PF02910 Fumarate reductase flavoprotein C-term 470 601 2.2E-35 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 SMGD1_RS02750 daec5c40cdd680edea93e91d632b7c82 662 PANTHER PTHR11632 1 114 5.7E-255 T 22-04-2016 SMGD1_RS02750 daec5c40cdd680edea93e91d632b7c82 662 PANTHER PTHR11632 136 594 5.7E-255 T 22-04-2016 SMGD1_RS02750 daec5c40cdd680edea93e91d632b7c82 662 Gene3D G3DSA:3.50.50.60 5 257 4.5E-88 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS02750 daec5c40cdd680edea93e91d632b7c82 662 Gene3D G3DSA:3.50.50.60 366 429 4.5E-88 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS02750 daec5c40cdd680edea93e91d632b7c82 662 Gene3D G3DSA:4.10.80.40 553 589 1.4E-11 T 22-04-2016 SMGD1_RS02750 daec5c40cdd680edea93e91d632b7c82 662 Gene3D G3DSA:1.20.58.100 446 552 1.9E-31 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 SMGD1_RS02750 daec5c40cdd680edea93e91d632b7c82 662 Gene3D G3DSA:3.90.700.10 258 365 2.6E-38 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain SMGD1_RS02750 daec5c40cdd680edea93e91d632b7c82 662 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 41 50 - T 22-04-2016 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 SMGD1_RS02750 daec5c40cdd680edea93e91d632b7c82 662 PANTHER PTHR11632:SF5 1 114 5.7E-255 T 22-04-2016 SMGD1_RS02750 daec5c40cdd680edea93e91d632b7c82 662 SUPERFAMILY SSF56425 251 370 1.29E-40 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain SMGD1_RS02750 daec5c40cdd680edea93e91d632b7c82 662 SUPERFAMILY SSF51905 374 445 1.63E-56 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS02750 daec5c40cdd680edea93e91d632b7c82 662 SUPERFAMILY SSF51905 145 274 1.63E-56 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS02750 daec5c40cdd680edea93e91d632b7c82 662 SUPERFAMILY SSF51905 3 116 1.63E-56 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS02750 daec5c40cdd680edea93e91d632b7c82 662 PANTHER PTHR11632:SF5 136 594 5.7E-255 T 22-04-2016 SMGD1_RS02750 daec5c40cdd680edea93e91d632b7c82 662 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 7 601 3.4E-216 T 22-04-2016 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 SMGD1_RS02750 daec5c40cdd680edea93e91d632b7c82 662 SUPERFAMILY SSF46977 461 658 4.45E-48 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 SMGD1_RS02750 daec5c40cdd680edea93e91d632b7c82 662 Pfam PF00890 FAD binding domain 7 411 5.6E-123 T 22-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain SMGD1_RS00940 fff45ba692f81c59396683deca648749 365 Pfam PF01266 FAD dependent oxidoreductase 6 361 5.3E-44 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 SMGD1_RS00940 fff45ba692f81c59396683deca648749 365 PANTHER PTHR11985:SF1 5 365 3.5E-82 T 22-04-2016 SMGD1_RS00940 fff45ba692f81c59396683deca648749 365 Gene3D G3DSA:3.50.50.60 2 216 1.4E-35 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS00940 fff45ba692f81c59396683deca648749 365 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 5 17 1.4E-10 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 SMGD1_RS00940 fff45ba692f81c59396683deca648749 365 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 341 353 1.4E-10 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 SMGD1_RS00940 fff45ba692f81c59396683deca648749 365 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 309 315 1.4E-10 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 SMGD1_RS00940 fff45ba692f81c59396683deca648749 365 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 34 46 1.4E-10 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 SMGD1_RS00940 fff45ba692f81c59396683deca648749 365 SUPERFAMILY SSF51905 3 294 7.25E-36 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS00940 fff45ba692f81c59396683deca648749 365 PANTHER PTHR11985 5 365 3.5E-82 T 22-04-2016 SMGD1_RS08105 919e2f285795d9f74f3962c24cffb332 117 Gene3D G3DSA:3.40.1260.10 2 117 3.9E-30 T 22-04-2016 IPR027396 DsrEFH-like SMGD1_RS08105 919e2f285795d9f74f3962c24cffb332 117 PANTHER PTHR34874 1 117 1.1E-18 T 22-04-2016 SMGD1_RS08105 919e2f285795d9f74f3962c24cffb332 117 SUPERFAMILY SSF75169 1 117 5.15E-23 T 22-04-2016 IPR027396 DsrEFH-like SMGD1_RS08105 919e2f285795d9f74f3962c24cffb332 117 Pfam PF02635 DsrE/DsrF-like family 3 117 2.6E-18 T 22-04-2016 IPR003787 Sulphur relay, DsrE/F-like protein SMGD1_RS01150 f96812b656729b0638cf5540be7daab3 371 SUPERFAMILY SSF47384 153 221 1.79E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS01150 f96812b656729b0638cf5540be7daab3 371 SMART SM00388 162 224 4.0E-4 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS01150 f96812b656729b0638cf5540be7daab3 371 SUPERFAMILY SSF52172 14 157 2.28E-26 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS01150 f96812b656729b0638cf5540be7daab3 371 Gene3D G3DSA:3.40.50.2300 14 154 2.4E-23 T 22-04-2016 SMGD1_RS01150 f96812b656729b0638cf5540be7daab3 371 Gene3D G3DSA:3.30.565.10 228 368 3.5E-25 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS01150 f96812b656729b0638cf5540be7daab3 371 PANTHER PTHR24423 141 368 1.7E-28 T 22-04-2016 SMGD1_RS01150 f96812b656729b0638cf5540be7daab3 371 PANTHER PTHR24423 5 16 1.7E-28 T 22-04-2016 SMGD1_RS01150 f96812b656729b0638cf5540be7daab3 371 Pfam PF00072 Response regulator receiver domain 17 129 8.5E-19 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS01150 f96812b656729b0638cf5540be7daab3 371 SMART SM00448 15 129 9.7E-17 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS01150 f96812b656729b0638cf5540be7daab3 371 Gene3D G3DSA:1.10.287.130 158 216 2.2E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS01150 f96812b656729b0638cf5540be7daab3 371 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 272 368 3.0E-12 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS01150 f96812b656729b0638cf5540be7daab3 371 SUPERFAMILY SSF55874 228 369 8.25E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS01150 f96812b656729b0638cf5540be7daab3 371 SMART SM00387 269 370 1.8E-10 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS13590 cb95dc271fb78ae48edd2b54de2dccca 355 SUPERFAMILY SSF55874 222 353 6.55E-24 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS13590 cb95dc271fb78ae48edd2b54de2dccca 355 SMART SM00387 257 355 9.4E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS13590 cb95dc271fb78ae48edd2b54de2dccca 355 PANTHER PTHR24423 144 353 1.3E-28 T 22-04-2016 SMGD1_RS13590 cb95dc271fb78ae48edd2b54de2dccca 355 PANTHER PTHR24423:SF394 144 353 1.3E-28 T 22-04-2016 SMGD1_RS13590 cb95dc271fb78ae48edd2b54de2dccca 355 SMART SM00388 155 226 0.0053 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS13590 cb95dc271fb78ae48edd2b54de2dccca 355 SUPERFAMILY SSF47384 143 215 2.94E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS13590 cb95dc271fb78ae48edd2b54de2dccca 355 PRINTS PR00344 Bacterial sensor protein C-terminal signature 290 304 1.0E-6 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS13590 cb95dc271fb78ae48edd2b54de2dccca 355 PRINTS PR00344 Bacterial sensor protein C-terminal signature 317 335 1.0E-6 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS13590 cb95dc271fb78ae48edd2b54de2dccca 355 PRINTS PR00344 Bacterial sensor protein C-terminal signature 341 354 1.0E-6 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS13590 cb95dc271fb78ae48edd2b54de2dccca 355 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 260 354 2.4E-14 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS13590 cb95dc271fb78ae48edd2b54de2dccca 355 Gene3D G3DSA:1.10.287.130 149 203 8.5E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS13590 cb95dc271fb78ae48edd2b54de2dccca 355 Pfam PF00512 His Kinase A (phospho-acceptor) domain 156 213 6.7E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS13590 cb95dc271fb78ae48edd2b54de2dccca 355 Gene3D G3DSA:3.30.565.10 204 354 1.0E-22 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS03605 580e83eba07ddea48d64597fa054178f 80 Hamap MF_01926 Phosphoribosylformylglycinamidine synthase subunit PurS [purS]. 2 79 20.392 T 22-04-2016 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SMGD1_RS03605 580e83eba07ddea48d64597fa054178f 80 Pfam PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase 3 79 9.8E-31 T 22-04-2016 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SMGD1_RS03605 580e83eba07ddea48d64597fa054178f 80 ProDom PD010362 PHOSPHORIBOSYLFORMYLGLYCINAMIDINE PURS SYNTHETASE SYNTHASE COMPONENT SYNTHASE LIGASE FGAM UPF0062 I 9 78 3.0E-26 T 22-04-2016 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SMGD1_RS03605 580e83eba07ddea48d64597fa054178f 80 Gene3D G3DSA:3.30.1280.10 1 79 2.2E-32 T 22-04-2016 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SMGD1_RS03605 580e83eba07ddea48d64597fa054178f 80 SUPERFAMILY SSF82697 2 79 5.41E-27 T 22-04-2016 SMGD1_RS03605 580e83eba07ddea48d64597fa054178f 80 PANTHER PTHR34696 1 79 1.6E-25 T 22-04-2016 SMGD1_RS03605 580e83eba07ddea48d64597fa054178f 80 TIGRFAM TIGR00302 TIGR00302: phosphoribosylformylglycinamidine synthase, purS protein 3 79 1.1E-25 T 22-04-2016 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SMGD1_RS00425 d3349834fa73bd7408c8c6876e2aeceb 485 TIGRFAM TIGR00296 TIGR00296: uncharacterized protein, PH0010 family 304 482 5.3E-35 T 22-04-2016 IPR023473 AMMECR1 SMGD1_RS00425 d3349834fa73bd7408c8c6876e2aeceb 485 Gene3D G3DSA:3.30.700.20 304 418 3.1E-38 T 22-04-2016 IPR027485 AMMECR1, N-terminal SMGD1_RS00425 d3349834fa73bd7408c8c6876e2aeceb 485 Pfam PF01871 AMMECR1 314 477 2.9E-40 T 22-04-2016 IPR002733 AMMECR1 domain SMGD1_RS00425 d3349834fa73bd7408c8c6876e2aeceb 485 PANTHER PTHR11060 20 300 1.3E-62 T 22-04-2016 IPR002737 MEMO1 family SMGD1_RS00425 d3349834fa73bd7408c8c6876e2aeceb 485 TIGRFAM TIGR04335 AmmeMemoSam_A: AmmeMemoRadiSam system protein A 311 480 8.0E-46 T 22-04-2016 IPR027623 AmmeMemoRadiSam system protein A SMGD1_RS00425 d3349834fa73bd7408c8c6876e2aeceb 485 PANTHER PTHR11060:SF0 20 300 1.3E-62 T 22-04-2016 SMGD1_RS00425 d3349834fa73bd7408c8c6876e2aeceb 485 TIGRFAM TIGR04336 AmmeMemoSam_B: AmmeMemoRadiSam system protein B 24 295 4.9E-68 T 22-04-2016 IPR002737 MEMO1 family SMGD1_RS00425 d3349834fa73bd7408c8c6876e2aeceb 485 Gene3D G3DSA:3.30.1490.150 419 475 5.5E-15 T 22-04-2016 SMGD1_RS00425 d3349834fa73bd7408c8c6876e2aeceb 485 SUPERFAMILY SSF143447 302 481 1.24E-46 T 22-04-2016 IPR002733 AMMECR1 domain SMGD1_RS00425 d3349834fa73bd7408c8c6876e2aeceb 485 Pfam PF01875 Memo-like protein 26 294 8.7E-54 T 22-04-2016 IPR002737 MEMO1 family SMGD1_RS00475 3f9ee2ffd1c107d0d5c533938a2d9ee9 1044 Pfam PF00656 Caspase domain 795 1029 2.5E-15 T 22-04-2016 SMGD1_RS00475 3f9ee2ffd1c107d0d5c533938a2d9ee9 1044 Pfam PF13360 PQQ-like domain 111 301 3.8E-4 T 22-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat SMGD1_RS00475 3f9ee2ffd1c107d0d5c533938a2d9ee9 1044 SMART SM00320 46 87 2.4E-5 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS00475 3f9ee2ffd1c107d0d5c533938a2d9ee9 1044 SMART SM00320 560 599 6.9E-6 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS00475 3f9ee2ffd1c107d0d5c533938a2d9ee9 1044 SMART SM00320 90 129 0.004 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS00475 3f9ee2ffd1c107d0d5c533938a2d9ee9 1044 SMART SM00320 519 557 0.32 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS00475 3f9ee2ffd1c107d0d5c533938a2d9ee9 1044 SMART SM00320 217 254 130.0 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS00475 3f9ee2ffd1c107d0d5c533938a2d9ee9 1044 SMART SM00320 338 377 2.4 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS00475 3f9ee2ffd1c107d0d5c533938a2d9ee9 1044 Gene3D G3DSA:2.130.10.10 211 450 1.2E-20 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 SMGD1_RS00475 3f9ee2ffd1c107d0d5c533938a2d9ee9 1044 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 74 88 - T 22-04-2016 IPR019775 WD40 repeat, conserved site SMGD1_RS00475 3f9ee2ffd1c107d0d5c533938a2d9ee9 1044 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 116 130 - T 22-04-2016 IPR019775 WD40 repeat, conserved site SMGD1_RS00475 3f9ee2ffd1c107d0d5c533938a2d9ee9 1044 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 544 558 - T 22-04-2016 IPR019775 WD40 repeat, conserved site SMGD1_RS00475 3f9ee2ffd1c107d0d5c533938a2d9ee9 1044 Pfam PF00400 WD domain, G-beta repeat 563 599 2.0E-4 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS00475 3f9ee2ffd1c107d0d5c533938a2d9ee9 1044 Pfam PF00400 WD domain, G-beta repeat 55 87 4.7E-4 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS00475 3f9ee2ffd1c107d0d5c533938a2d9ee9 1044 Gene3D G3DSA:2.130.10.10 57 188 5.7E-28 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 SMGD1_RS00475 3f9ee2ffd1c107d0d5c533938a2d9ee9 1044 PANTHER PTHR22847 538 624 8.4E-32 T 22-04-2016 SMGD1_RS00475 3f9ee2ffd1c107d0d5c533938a2d9ee9 1044 PANTHER PTHR22847 996 1018 8.4E-32 T 22-04-2016 SMGD1_RS00475 3f9ee2ffd1c107d0d5c533938a2d9ee9 1044 PANTHER PTHR22847 36 195 8.4E-32 T 22-04-2016 SMGD1_RS00475 3f9ee2ffd1c107d0d5c533938a2d9ee9 1044 SUPERFAMILY SSF50978 55 177 2.56E-37 T 22-04-2016 IPR017986 WD40-repeat-containing domain GO:0005515 SMGD1_RS00475 3f9ee2ffd1c107d0d5c533938a2d9ee9 1044 SUPERFAMILY SSF50978 216 386 2.56E-37 T 22-04-2016 IPR017986 WD40-repeat-containing domain GO:0005515 SMGD1_RS00475 3f9ee2ffd1c107d0d5c533938a2d9ee9 1044 SUPERFAMILY SSF52129 795 994 1.57E-7 T 22-04-2016 IPR029030 Caspase-like domain SMGD1_RS00475 3f9ee2ffd1c107d0d5c533938a2d9ee9 1044 SUPERFAMILY SSF50998 319 604 1.62E-35 T 22-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily SMGD1_RS00475 3f9ee2ffd1c107d0d5c533938a2d9ee9 1044 Gene3D G3DSA:2.130.10.10 464 606 1.6E-23 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 SMGD1_RS00475 3f9ee2ffd1c107d0d5c533938a2d9ee9 1044 Gene3D G3DSA:3.40.50.1460 792 932 4.0E-13 T 22-04-2016 IPR029030 Caspase-like domain SMGD1_RS02700 1427edec9bb51e60e4aca43b0d550dd9 295 SMART SM00448 1 105 2.6E-5 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS02700 1427edec9bb51e60e4aca43b0d550dd9 295 PANTHER PTHR26402:SF522 1 112 3.8E-13 T 22-04-2016 SMGD1_RS02700 1427edec9bb51e60e4aca43b0d550dd9 295 PANTHER PTHR26402 1 112 3.8E-13 T 22-04-2016 SMGD1_RS02700 1427edec9bb51e60e4aca43b0d550dd9 295 Pfam PF00072 Response regulator receiver domain 3 105 1.0E-8 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS02700 1427edec9bb51e60e4aca43b0d550dd9 295 SUPERFAMILY SSF52172 1 141 9.68E-18 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS02700 1427edec9bb51e60e4aca43b0d550dd9 295 Gene3D G3DSA:3.40.50.2300 2 116 1.0E-13 T 22-04-2016 SMGD1_RS13290 7ef05d63bba8be00359bf47b9a10fa21 552 Gene3D G3DSA:3.30.70.20 493 538 0.001 T 22-04-2016 SMGD1_RS13290 7ef05d63bba8be00359bf47b9a10fa21 552 Pfam PF13450 NAD(P)-binding Rossmann-like domain 10 57 1.2E-6 T 22-04-2016 SMGD1_RS13290 7ef05d63bba8be00359bf47b9a10fa21 552 PANTHER PTHR10617:SF107 7 474 2.6E-132 T 22-04-2016 IPR007859 ETF-QO/FixX GO:0051536|GO:0055114 SMGD1_RS13290 7ef05d63bba8be00359bf47b9a10fa21 552 Gene3D G3DSA:3.50.50.60 2 239 3.5E-26 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS13290 7ef05d63bba8be00359bf47b9a10fa21 552 SUPERFAMILY SSF54373 208 304 3.33E-26 T 22-04-2016 SMGD1_RS13290 7ef05d63bba8be00359bf47b9a10fa21 552 PANTHER PTHR10617 7 474 2.6E-132 T 22-04-2016 SMGD1_RS13290 7ef05d63bba8be00359bf47b9a10fa21 552 SUPERFAMILY SSF51905 3 206 8.57E-42 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS13290 7ef05d63bba8be00359bf47b9a10fa21 552 SUPERFAMILY SSF51905 304 392 8.57E-42 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS13290 7ef05d63bba8be00359bf47b9a10fa21 552 Gene3D G3DSA:3.30.9.10 245 362 5.1E-13 T 22-04-2016 SMGD1_RS13290 7ef05d63bba8be00359bf47b9a10fa21 552 SUPERFAMILY SSF54862 451 551 1.6E-17 T 22-04-2016 SMGD1_RS13290 7ef05d63bba8be00359bf47b9a10fa21 552 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 448 550 2.7E-36 T 22-04-2016 IPR007859 ETF-QO/FixX GO:0051536|GO:0055114 SMGD1_RS06265 31134388f52ea4feb58caebcf1d6af9d 355 Gene3D G3DSA:3.10.150.10 1 119 1.0E-19 T 22-04-2016 SMGD1_RS06265 31134388f52ea4feb58caebcf1d6af9d 355 Gene3D G3DSA:3.10.150.10 122 242 2.8E-26 T 22-04-2016 SMGD1_RS06265 31134388f52ea4feb58caebcf1d6af9d 355 Gene3D G3DSA:3.10.150.10 244 353 3.8E-17 T 22-04-2016 SMGD1_RS06265 31134388f52ea4feb58caebcf1d6af9d 355 SUPERFAMILY SSF55979 241 353 5.11E-20 T 22-04-2016 SMGD1_RS06265 31134388f52ea4feb58caebcf1d6af9d 355 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 119 1.4E-22 T 22-04-2016 IPR022634 DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMGD1_RS06265 31134388f52ea4feb58caebcf1d6af9d 355 SUPERFAMILY SSF55979 126 239 4.0E-21 T 22-04-2016 SMGD1_RS06265 31134388f52ea4feb58caebcf1d6af9d 355 SMART SM00480 17 351 2.3E-75 T 22-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMGD1_RS06265 31134388f52ea4feb58caebcf1d6af9d 355 PANTHER PTHR30478 2 355 1.1E-60 T 22-04-2016 SMGD1_RS06265 31134388f52ea4feb58caebcf1d6af9d 355 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 353 4.2E-84 T 22-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMGD1_RS06265 31134388f52ea4feb58caebcf1d6af9d 355 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 241 353 7.3E-14 T 22-04-2016 IPR022635 DNA polymerase III, beta chain, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMGD1_RS06265 31134388f52ea4feb58caebcf1d6af9d 355 SUPERFAMILY SSF55979 1 119 2.59E-22 T 22-04-2016 SMGD1_RS06265 31134388f52ea4feb58caebcf1d6af9d 355 Pfam PF02767 DNA polymerase III beta subunit, central domain 129 238 4.2E-20 T 22-04-2016 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMGD1_RS06265 31134388f52ea4feb58caebcf1d6af9d 355 PIRSF PIRSF000804 1 355 2.5E-71 T 22-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMGD1_RS09055 a6f123315a4ce48ab9df5b1afbe4d2e0 660 Pfam PF00271 Helicase conserved C-terminal domain 443 549 6.6E-19 T 22-04-2016 IPR001650 Helicase, C-terminal SMGD1_RS09055 a6f123315a4ce48ab9df5b1afbe4d2e0 660 Gene3D G3DSA:4.10.860.10 608 659 4.1E-13 T 22-04-2016 IPR001943 UVR domain GO:0005515 SMGD1_RS09055 a6f123315a4ce48ab9df5b1afbe4d2e0 660 SUPERFAMILY SSF46600 614 659 9.15E-10 T 22-04-2016 IPR001943 UVR domain GO:0005515 SMGD1_RS09055 a6f123315a4ce48ab9df5b1afbe4d2e0 660 Pfam PF12344 Ultra-violet resistance protein B 556 597 1.8E-19 T 22-04-2016 IPR024759 UvrB, YAD/RRR-motif-containing domain SMGD1_RS09055 a6f123315a4ce48ab9df5b1afbe4d2e0 660 SUPERFAMILY SSF52540 6 419 3.83E-124 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS09055 a6f123315a4ce48ab9df5b1afbe4d2e0 660 SMART SM00487 11 429 3.5E-23 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SMGD1_RS09055 a6f123315a4ce48ab9df5b1afbe4d2e0 660 Pfam PF04851 Type III restriction enzyme, res subunit 18 121 6.5E-9 T 22-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 SMGD1_RS09055 a6f123315a4ce48ab9df5b1afbe4d2e0 660 PANTHER PTHR24029 1 660 0.0 T 22-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 SMGD1_RS09055 a6f123315a4ce48ab9df5b1afbe4d2e0 660 Pfam PF02151 UvrB/uvrC motif 627 659 5.4E-10 T 22-04-2016 IPR001943 UVR domain GO:0005515 SMGD1_RS09055 a6f123315a4ce48ab9df5b1afbe4d2e0 660 Hamap MF_00204 UvrABC system protein B [uvrB]. 5 660 40.794 T 22-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 SMGD1_RS09055 a6f123315a4ce48ab9df5b1afbe4d2e0 660 SUPERFAMILY SSF52540 474 593 1.69E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS09055 a6f123315a4ce48ab9df5b1afbe4d2e0 660 SUPERFAMILY SSF52540 35 82 1.69E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS09055 a6f123315a4ce48ab9df5b1afbe4d2e0 660 Gene3D G3DSA:3.40.50.300 423 582 2.3E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS09055 a6f123315a4ce48ab9df5b1afbe4d2e0 660 Gene3D G3DSA:3.30.2060.10 162 231 2.0E-10 T 22-04-2016 SMGD1_RS09055 a6f123315a4ce48ab9df5b1afbe4d2e0 660 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 6 658 1.7E-293 T 22-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 SMGD1_RS09055 a6f123315a4ce48ab9df5b1afbe4d2e0 660 SMART SM00490 464 550 1.2E-18 T 22-04-2016 IPR001650 Helicase, C-terminal SMGD1_RS09055 a6f123315a4ce48ab9df5b1afbe4d2e0 660 Gene3D G3DSA:3.40.50.300 8 91 1.0E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS09055 a6f123315a4ce48ab9df5b1afbe4d2e0 660 Gene3D G3DSA:3.40.50.300 280 343 1.0E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS09055 a6f123315a4ce48ab9df5b1afbe4d2e0 660 Gene3D G3DSA:3.40.50.300 393 409 1.0E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS05515 5a93c96b4c399bb900ef7c01891fbea4 371 Gene3D G3DSA:1.10.287.130 161 219 4.1E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS05515 5a93c96b4c399bb900ef7c01891fbea4 371 Gene3D G3DSA:3.30.565.10 234 370 1.0E-24 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS05515 5a93c96b4c399bb900ef7c01891fbea4 371 SUPERFAMILY SSF55874 232 371 3.54E-25 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS05515 5a93c96b4c399bb900ef7c01891fbea4 371 SMART SM00387 271 369 1.5E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS05515 5a93c96b4c399bb900ef7c01891fbea4 371 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 275 370 5.2E-16 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS05515 5a93c96b4c399bb900ef7c01891fbea4 371 PANTHER PTHR24423 165 371 7.1E-29 T 22-04-2016 SMGD1_RS05515 5a93c96b4c399bb900ef7c01891fbea4 371 PANTHER PTHR24423 1 7 7.1E-29 T 22-04-2016 SMGD1_RS05515 5a93c96b4c399bb900ef7c01891fbea4 371 SUPERFAMILY SSF47384 158 215 2.35E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS05555 3daa43baf5366c117286c8385df88b6e 1036 SUPERFAMILY SSF82714 183 265 4.84E-14 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMGD1_RS05555 3daa43baf5366c117286c8385df88b6e 1036 SUPERFAMILY SSF82714 716 797 9.16E-10 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMGD1_RS05555 3daa43baf5366c117286c8385df88b6e 1036 SUPERFAMILY SSF82866 803 1033 2.22E-38 T 22-04-2016 SMGD1_RS05555 3daa43baf5366c117286c8385df88b6e 1036 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1029 1.1E-295 T 22-04-2016 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 SMGD1_RS05555 3daa43baf5366c117286c8385df88b6e 1036 PANTHER PTHR32063 2 1036 0.0 T 22-04-2016 SMGD1_RS05555 3daa43baf5366c117286c8385df88b6e 1036 SUPERFAMILY SSF82693 43 126 8.37E-16 T 22-04-2016 SMGD1_RS05555 3daa43baf5366c117286c8385df88b6e 1036 PRINTS PR00702 Acriflavin resistance protein family signature 355 376 2.2E-23 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMGD1_RS05555 3daa43baf5366c117286c8385df88b6e 1036 PRINTS PR00702 Acriflavin resistance protein family signature 383 407 2.2E-23 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMGD1_RS05555 3daa43baf5366c117286c8385df88b6e 1036 PRINTS PR00702 Acriflavin resistance protein family signature 328 351 2.2E-23 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMGD1_RS05555 3daa43baf5366c117286c8385df88b6e 1036 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 2.2E-23 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMGD1_RS05555 3daa43baf5366c117286c8385df88b6e 1036 SUPERFAMILY SSF82693 137 182 3.56E-12 T 22-04-2016 SMGD1_RS05555 3daa43baf5366c117286c8385df88b6e 1036 SUPERFAMILY SSF82693 268 322 3.56E-12 T 22-04-2016 SMGD1_RS05555 3daa43baf5366c117286c8385df88b6e 1036 Pfam PF00873 AcrB/AcrD/AcrF family 5 1028 1.4E-210 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMGD1_RS05555 3daa43baf5366c117286c8385df88b6e 1036 PANTHER PTHR32063:SF19 2 1036 0.0 T 22-04-2016 SMGD1_RS05555 3daa43baf5366c117286c8385df88b6e 1036 Gene3D G3DSA:3.30.2090.10 183 265 1.8E-15 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMGD1_RS05555 3daa43baf5366c117286c8385df88b6e 1036 Gene3D G3DSA:3.30.2090.10 715 798 7.0E-10 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMGD1_RS05555 3daa43baf5366c117286c8385df88b6e 1036 Gene3D G3DSA:1.10.3850.10 274 500 2.6E-57 T 22-04-2016 SMGD1_RS05555 3daa43baf5366c117286c8385df88b6e 1036 Gene3D G3DSA:1.10.3850.10 808 1029 3.8E-45 T 22-04-2016 SMGD1_RS05555 3daa43baf5366c117286c8385df88b6e 1036 SUPERFAMILY SSF82866 291 498 4.05E-39 T 22-04-2016 SMGD1_RS05555 3daa43baf5366c117286c8385df88b6e 1036 Gene3D G3DSA:3.30.70.1430 43 140 6.5E-19 T 22-04-2016 SMGD1_RS01740 3c51d44459911c6f1bf71f276cf7538c 873 Pfam PF08264 Anticodon-binding domain of tRNA 615 742 2.0E-30 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 SMGD1_RS01740 3c51d44459911c6f1bf71f276cf7538c 873 Hamap MF_02004 Valine--tRNA ligase [valS]. 1 873 14.8 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 SMGD1_RS01740 3c51d44459911c6f1bf71f276cf7538c 873 Gene3D G3DSA:3.40.50.620 5 195 5.5E-137 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMGD1_RS01740 3c51d44459911c6f1bf71f276cf7538c 873 Gene3D G3DSA:3.40.50.620 342 561 5.5E-137 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMGD1_RS01740 3c51d44459911c6f1bf71f276cf7538c 873 TIGRFAM TIGR00422 valS: valine--tRNA ligase 2 855 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 SMGD1_RS01740 3c51d44459911c6f1bf71f276cf7538c 873 SUPERFAMILY SSF50677 193 343 8.76E-61 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 SMGD1_RS01740 3c51d44459911c6f1bf71f276cf7538c 873 SUPERFAMILY SSF46589 808 872 1.05E-12 T 22-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 SMGD1_RS01740 3c51d44459911c6f1bf71f276cf7538c 873 SUPERFAMILY SSF47323 585 798 6.54E-38 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMGD1_RS01740 3c51d44459911c6f1bf71f276cf7538c 873 PRINTS PR00986 Valyl-tRNA synthetase signature 232 249 2.62E-27 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 SMGD1_RS01740 3c51d44459911c6f1bf71f276cf7538c 873 PRINTS PR00986 Valyl-tRNA synthetase signature 39 50 2.62E-27 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 SMGD1_RS01740 3c51d44459911c6f1bf71f276cf7538c 873 PRINTS PR00986 Valyl-tRNA synthetase signature 445 466 2.62E-27 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 SMGD1_RS01740 3c51d44459911c6f1bf71f276cf7538c 873 PRINTS PR00986 Valyl-tRNA synthetase signature 347 360 2.62E-27 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 SMGD1_RS01740 3c51d44459911c6f1bf71f276cf7538c 873 PANTHER PTHR11946 1 787 0.0 T 22-04-2016 SMGD1_RS01740 3c51d44459911c6f1bf71f276cf7538c 873 PANTHER PTHR11946 804 866 0.0 T 22-04-2016 SMGD1_RS01740 3c51d44459911c6f1bf71f276cf7538c 873 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 46 57 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMGD1_RS01740 3c51d44459911c6f1bf71f276cf7538c 873 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 573 3.9E-190 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMGD1_RS01740 3c51d44459911c6f1bf71f276cf7538c 873 SUPERFAMILY SSF52374 2 194 9.01E-129 T 22-04-2016 SMGD1_RS01740 3c51d44459911c6f1bf71f276cf7538c 873 SUPERFAMILY SSF52374 342 582 9.01E-129 T 22-04-2016 SMGD1_RS01740 3c51d44459911c6f1bf71f276cf7538c 873 PANTHER PTHR11946:SF5 1 787 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 SMGD1_RS01740 3c51d44459911c6f1bf71f276cf7538c 873 PANTHER PTHR11946:SF5 804 866 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 SMGD1_RS01740 3c51d44459911c6f1bf71f276cf7538c 873 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 808 873 5.7E-14 T 22-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 SMGD1_RS01740 3c51d44459911c6f1bf71f276cf7538c 873 Gene3D G3DSA:3.90.740.10 196 338 5.7E-49 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 SMGD1_RS01740 3c51d44459911c6f1bf71f276cf7538c 873 Gene3D G3DSA:1.10.730.10 562 714 1.1E-39 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMGD1_RS13525 b3e052309e37f9976e25bfb43c1321d8 155 Pfam PF03968 OstA-like protein 21 132 3.4E-17 T 22-04-2016 IPR005653 Organic solvent tolerance-like, N-terminal SMGD1_RS13525 b3e052309e37f9976e25bfb43c1321d8 155 Gene3D G3DSA:2.60.450.10 18 147 4.6E-20 T 22-04-2016 SMGD1_RS13525 b3e052309e37f9976e25bfb43c1321d8 155 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 16 148 1.7E-27 T 22-04-2016 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 SMGD1_RS09900 b6b7de528faa39cfe8c4a43115e15ac0 278 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 10 269 17.844 T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 SMGD1_RS09900 b6b7de528faa39cfe8c4a43115e15ac0 278 PANTHER PTHR30589:SF0 2 267 3.4E-67 T 22-04-2016 SMGD1_RS09900 b6b7de528faa39cfe8c4a43115e15ac0 278 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 151 163 - T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 SMGD1_RS09900 b6b7de528faa39cfe8c4a43115e15ac0 278 PANTHER PTHR30589 2 267 3.4E-67 T 22-04-2016 SMGD1_RS09900 b6b7de528faa39cfe8c4a43115e15ac0 278 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 1 270 3.4E-67 T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 SMGD1_RS09900 b6b7de528faa39cfe8c4a43115e15ac0 278 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 13 264 3.8E-66 T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 SMGD1_RS09345 fdb651929c5d178c6b369ae75563cc35 270 PANTHER PTHR30371:SF0 8 264 4.3E-79 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 SMGD1_RS09345 fdb651929c5d178c6b369ae75563cc35 270 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 2 252 18.143 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 SMGD1_RS09345 fdb651929c5d178c6b369ae75563cc35 270 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 108 134 9.2E-40 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 SMGD1_RS09345 fdb651929c5d178c6b369ae75563cc35 270 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 90 108 9.2E-40 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 SMGD1_RS09345 fdb651929c5d178c6b369ae75563cc35 270 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 159 187 9.2E-40 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 SMGD1_RS09345 fdb651929c5d178c6b369ae75563cc35 270 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 4 31 9.2E-40 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 SMGD1_RS09345 fdb651929c5d178c6b369ae75563cc35 270 PANTHER PTHR30371 8 264 4.3E-79 T 22-04-2016 SMGD1_RS09345 fdb651929c5d178c6b369ae75563cc35 270 ProSitePatterns PS01218 TatC family signature. 159 178 - T 22-04-2016 IPR019820 Sec-independent periplasmic protein translocase, conserved site SMGD1_RS09345 fdb651929c5d178c6b369ae75563cc35 270 Pfam PF00902 Sec-independent protein translocase protein (TatC) 8 226 6.5E-63 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 SMGD1_RS09345 fdb651929c5d178c6b369ae75563cc35 270 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 5 231 2.5E-61 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 SMGD1_RS06780 998d905f6a1b4d2324ef54c4cc0bdc67 325 SUPERFAMILY SSF53067 1 117 8.42E-20 T 22-04-2016 SMGD1_RS06780 998d905f6a1b4d2324ef54c4cc0bdc67 325 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 3 299 4.3E-101 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SMGD1_RS06780 998d905f6a1b4d2324ef54c4cc0bdc67 325 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 126 138 2.0E-38 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SMGD1_RS06780 998d905f6a1b4d2324ef54c4cc0bdc67 325 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 149 170 2.0E-38 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SMGD1_RS06780 998d905f6a1b4d2324ef54c4cc0bdc67 325 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 93 112 2.0E-38 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SMGD1_RS06780 998d905f6a1b4d2324ef54c4cc0bdc67 325 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 3 16 2.0E-38 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SMGD1_RS06780 998d905f6a1b4d2324ef54c4cc0bdc67 325 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 72 92 2.0E-38 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SMGD1_RS06780 998d905f6a1b4d2324ef54c4cc0bdc67 325 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 256 265 2.0E-38 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SMGD1_RS06780 998d905f6a1b4d2324ef54c4cc0bdc67 325 SUPERFAMILY SSF53067 97 299 1.42E-30 T 22-04-2016 SMGD1_RS06780 998d905f6a1b4d2324ef54c4cc0bdc67 325 Gene3D G3DSA:3.30.420.40 2 143 7.1E-30 T 22-04-2016 SMGD1_RS06780 998d905f6a1b4d2324ef54c4cc0bdc67 325 PANTHER PTHR11735 1 325 5.9E-108 T 22-04-2016 SMGD1_RS06780 998d905f6a1b4d2324ef54c4cc0bdc67 325 PANTHER PTHR11735:SF6 1 325 5.9E-108 T 22-04-2016 SMGD1_RS06780 998d905f6a1b4d2324ef54c4cc0bdc67 325 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 2 306 1.4E-107 T 22-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SMGD1_RS06780 998d905f6a1b4d2324ef54c4cc0bdc67 325 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 325 53.635 T 22-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SMGD1_RS06780 998d905f6a1b4d2324ef54c4cc0bdc67 325 ProSitePatterns PS01016 Glycoprotease family signature. 92 112 - T 22-04-2016 IPR017860 Peptidase M22, conserved site KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SMGD1_RS06780 998d905f6a1b4d2324ef54c4cc0bdc67 325 Pfam PF00814 Glycoprotease family 24 299 1.1E-77 T 22-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SMGD1_RS01940 6f15ab1af244052fa2d46095b59b8c09 73 SUPERFAMILY SSF63562 18 70 2.96E-11 T 22-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SMGD1_RS01940 6f15ab1af244052fa2d46095b59b8c09 73 Gene3D G3DSA:3.90.940.10 18 66 2.0E-5 T 22-04-2016 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SMGD1_RS01940 6f15ab1af244052fa2d46095b59b8c09 73 SMART SM01409 9 65 1.9E-5 T 22-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SMGD1_RS01940 6f15ab1af244052fa2d46095b59b8c09 73 Pfam PF01192 RNA polymerase Rpb6 16 65 5.8E-7 T 22-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SMGD1_RS03535 2aeff3c6208a73c2ad34be125b774299 212 Pfam PF12800 4Fe-4S binding domain 11 24 0.042 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SMGD1_RS03535 2aeff3c6208a73c2ad34be125b774299 212 Pfam PF13247 4Fe-4S dicluster domain 51 144 1.6E-22 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SMGD1_RS03535 2aeff3c6208a73c2ad34be125b774299 212 Gene3D G3DSA:3.30.70.20 2 56 1.5E-15 T 22-04-2016 SMGD1_RS03535 2aeff3c6208a73c2ad34be125b774299 212 PANTHER PTHR11938 4 178 2.0E-58 T 22-04-2016 SMGD1_RS03535 2aeff3c6208a73c2ad34be125b774299 212 Gene3D G3DSA:3.30.70.20 94 124 3.0E-13 T 22-04-2016 SMGD1_RS03535 2aeff3c6208a73c2ad34be125b774299 212 PANTHER PTHR11938:SF86 4 178 2.0E-58 T 22-04-2016 SMGD1_RS03535 2aeff3c6208a73c2ad34be125b774299 212 Gene3D G3DSA:3.30.70.20 125 179 5.2E-15 T 22-04-2016 SMGD1_RS03535 2aeff3c6208a73c2ad34be125b774299 212 SUPERFAMILY SSF54862 1 179 2.62E-64 T 22-04-2016 SMGD1_RS03535 2aeff3c6208a73c2ad34be125b774299 212 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 89 100 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SMGD1_RS03535 2aeff3c6208a73c2ad34be125b774299 212 Gene3D G3DSA:3.30.70.20 57 93 9.5E-16 T 22-04-2016 SMGD1_RS02450 e2d72c1565a9009d4b2f3c924b1346d5 374 Gene3D G3DSA:3.90.1150.10 244 372 1.1E-20 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SMGD1_RS02450 e2d72c1565a9009d4b2f3c924b1346d5 374 PIRSF PIRSF000390 1 374 6.0E-99 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase SMGD1_RS02450 e2d72c1565a9009d4b2f3c924b1346d5 374 SUPERFAMILY SSF53383 8 372 7.61E-99 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SMGD1_RS02450 e2d72c1565a9009d4b2f3c924b1346d5 374 Gene3D G3DSA:3.40.640.10 4 242 2.0E-74 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SMGD1_RS02450 e2d72c1565a9009d4b2f3c924b1346d5 374 PANTHER PTHR30244 1 373 3.0E-88 T 22-04-2016 SMGD1_RS02450 e2d72c1565a9009d4b2f3c924b1346d5 374 PANTHER PTHR30244:SF16 1 373 3.0E-88 T 22-04-2016 SMGD1_RS02450 e2d72c1565a9009d4b2f3c924b1346d5 374 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 13 368 1.4E-95 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase SMGD1_RS07245 bda5fb4d326f631492a31f65c5549ca0 648 Pfam PF08448 PAS fold 236 344 9.8E-15 T 22-04-2016 IPR013656 PAS fold-4 SMGD1_RS07245 bda5fb4d326f631492a31f65c5549ca0 648 PANTHER PTHR24423 205 476 1.2E-34 T 22-04-2016 SMGD1_RS07245 bda5fb4d326f631492a31f65c5549ca0 648 SUPERFAMILY SSF55785 88 210 7.68E-16 T 22-04-2016 IPR000014 PAS domain SMGD1_RS07245 bda5fb4d326f631492a31f65c5549ca0 648 SMART SM00091 230 297 0.035 T 22-04-2016 IPR000014 PAS domain SMGD1_RS07245 bda5fb4d326f631492a31f65c5549ca0 648 SMART SM00091 352 418 3.6E-5 T 22-04-2016 IPR000014 PAS domain SMGD1_RS07245 bda5fb4d326f631492a31f65c5549ca0 648 SMART SM00091 100 168 2.3E-5 T 22-04-2016 IPR000014 PAS domain SMGD1_RS07245 bda5fb4d326f631492a31f65c5549ca0 648 Gene3D G3DSA:3.30.450.20 88 210 1.5E-17 T 22-04-2016 SMGD1_RS07245 bda5fb4d326f631492a31f65c5549ca0 648 SUPERFAMILY SSF55785 215 342 7.68E-20 T 22-04-2016 IPR000014 PAS domain SMGD1_RS07245 bda5fb4d326f631492a31f65c5549ca0 648 Gene3D G3DSA:3.30.450.20 361 465 5.7E-28 T 22-04-2016 SMGD1_RS07245 bda5fb4d326f631492a31f65c5549ca0 648 Pfam PF00989 PAS fold 108 215 1.4E-9 T 22-04-2016 IPR013767 PAS fold GO:0006355 SMGD1_RS07245 bda5fb4d326f631492a31f65c5549ca0 648 SMART SM00267 466 639 7.9E-58 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS07245 bda5fb4d326f631492a31f65c5549ca0 648 SUPERFAMILY SSF55073 482 640 2.28E-47 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS07245 bda5fb4d326f631492a31f65c5549ca0 648 Pfam PF13426 PAS domain 363 465 1.3E-18 T 22-04-2016 IPR000014 PAS domain SMGD1_RS07245 bda5fb4d326f631492a31f65c5549ca0 648 Gene3D G3DSA:3.30.450.20 214 341 3.7E-20 T 22-04-2016 SMGD1_RS07245 bda5fb4d326f631492a31f65c5549ca0 648 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 473 638 1.1E-42 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS07245 bda5fb4d326f631492a31f65c5549ca0 648 Pfam PF00990 Diguanylate cyclase, GGDEF domain 477 634 2.3E-46 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS07245 bda5fb4d326f631492a31f65c5549ca0 648 SUPERFAMILY SSF55785 361 463 2.27E-27 T 22-04-2016 IPR000014 PAS domain SMGD1_RS07245 bda5fb4d326f631492a31f65c5549ca0 648 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 227 350 4.5E-13 T 22-04-2016 IPR000014 PAS domain SMGD1_RS07245 bda5fb4d326f631492a31f65c5549ca0 648 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 352 473 3.0E-22 T 22-04-2016 IPR000014 PAS domain SMGD1_RS07245 bda5fb4d326f631492a31f65c5549ca0 648 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 99 225 4.3E-16 T 22-04-2016 IPR000014 PAS domain SMGD1_RS07245 bda5fb4d326f631492a31f65c5549ca0 648 Gene3D G3DSA:3.30.70.270 479 640 7.1E-53 T 22-04-2016 SMGD1_RS07245 bda5fb4d326f631492a31f65c5549ca0 648 SMART SM00086 303 344 100.0 T 22-04-2016 IPR001610 PAC motif SMGD1_RS07245 bda5fb4d326f631492a31f65c5549ca0 648 SMART SM00086 176 218 0.061 T 22-04-2016 IPR001610 PAC motif SMGD1_RS07245 bda5fb4d326f631492a31f65c5549ca0 648 SMART SM00086 424 466 2.4E-5 T 22-04-2016 IPR001610 PAC motif SMGD1_RS10535 004c07694e29aac4236c445eb89cba9e 203 Gene3D G3DSA:3.40.50.1110 32 198 2.7E-39 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain SMGD1_RS10535 004c07694e29aac4236c445eb89cba9e 203 SUPERFAMILY SSF52266 32 197 8.4E-39 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain SMGD1_RS10535 004c07694e29aac4236c445eb89cba9e 203 PANTHER PTHR30383:SF5 1 202 7.9E-31 T 22-04-2016 SMGD1_RS10535 004c07694e29aac4236c445eb89cba9e 203 PANTHER PTHR30383 1 202 7.9E-31 T 22-04-2016 SMGD1_RS10535 004c07694e29aac4236c445eb89cba9e 203 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 35 185 4.1E-23 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain SMGD1_RS06655 5122d0c220a9cc46bf97c613734cb3e3 790 Gene3D G3DSA:3.30.450.20 81 118 6.9E-15 T 22-04-2016 SMGD1_RS06655 5122d0c220a9cc46bf97c613734cb3e3 790 Gene3D G3DSA:3.30.450.20 164 214 6.9E-15 T 22-04-2016 SMGD1_RS06655 5122d0c220a9cc46bf97c613734cb3e3 790 Gene3D G3DSA:3.30.450.20 215 324 2.5E-8 T 22-04-2016 SMGD1_RS06655 5122d0c220a9cc46bf97c613734cb3e3 790 Pfam PF02743 Cache domain 39 309 7.9E-15 T 22-04-2016 IPR033479 Double Cache domain 1 SMGD1_RS06655 5122d0c220a9cc46bf97c613734cb3e3 790 SUPERFAMILY SSF109604 415 498 2.48E-5 T 22-04-2016 SMGD1_RS06655 5122d0c220a9cc46bf97c613734cb3e3 790 Gene3D G3DSA:1.10.3210.10 409 490 2.0E-6 T 22-04-2016 IPR006674 HD domain SMGD1_RS06655 5122d0c220a9cc46bf97c613734cb3e3 790 Gene3D G3DSA:1.10.3210.10 639 740 8.1E-4 T 22-04-2016 IPR006674 HD domain SMGD1_RS06655 5122d0c220a9cc46bf97c613734cb3e3 790 SMART SM00471 420 732 3.0E-5 T 22-04-2016 IPR003607 HD/PDEase domain SMGD1_RS06655 5122d0c220a9cc46bf97c613734cb3e3 790 Pfam PF13487 HD domain 649 714 6.3E-20 T 22-04-2016 SMGD1_RS06655 5122d0c220a9cc46bf97c613734cb3e3 790 SUPERFAMILY SSF109604 648 762 1.66E-8 T 22-04-2016 SMGD1_RS12415 c52081b4dfde0c9ef15f66f733e4f13d 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 36 57 2.1E-31 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SMGD1_RS12415 c52081b4dfde0c9ef15f66f733e4f13d 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 131 148 2.1E-31 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SMGD1_RS12415 c52081b4dfde0c9ef15f66f733e4f13d 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 73 91 2.1E-31 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SMGD1_RS12415 c52081b4dfde0c9ef15f66f733e4f13d 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 105 121 2.1E-31 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SMGD1_RS12415 c52081b4dfde0c9ef15f66f733e4f13d 297 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 7 291 1.8E-102 T 22-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SMGD1_RS12415 c52081b4dfde0c9ef15f66f733e4f13d 297 PANTHER PTHR12128 3 294 2.9E-111 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SMGD1_RS12415 c52081b4dfde0c9ef15f66f733e4f13d 297 Gene3D G3DSA:3.20.20.70 2 294 2.1E-101 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMGD1_RS12415 c52081b4dfde0c9ef15f66f733e4f13d 297 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 3 291 61.002 T 22-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SMGD1_RS12415 c52081b4dfde0c9ef15f66f733e4f13d 297 SUPERFAMILY SSF51569 5 293 5.02E-92 T 22-04-2016 SMGD1_RS12415 c52081b4dfde0c9ef15f66f733e4f13d 297 Pfam PF00701 Dihydrodipicolinate synthetase family 5 290 3.5E-88 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SMGD1_RS12415 c52081b4dfde0c9ef15f66f733e4f13d 297 PANTHER PTHR12128:SF34 3 294 2.9E-111 T 22-04-2016 SMGD1_RS12415 c52081b4dfde0c9ef15f66f733e4f13d 297 SMART SM01130 3 293 7.7E-128 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SMGD1_RS12415 c52081b4dfde0c9ef15f66f733e4f13d 297 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 136 167 - T 22-04-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SMGD1_RS12415 c52081b4dfde0c9ef15f66f733e4f13d 297 PIRSF PIRSF001365 1 295 2.3E-86 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SMGD1_RS00950 143a2eb7e1c54e0263210516b84471b5 251 PANTHER PTHR35936 35 239 4.5E-18 T 22-04-2016 SMGD1_RS00950 143a2eb7e1c54e0263210516b84471b5 251 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 98 230 3.2E-14 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SMGD1_RS00950 143a2eb7e1c54e0263210516b84471b5 251 SUPERFAMILY SSF53850 39 229 6.84E-21 T 22-04-2016 SMGD1_RS00950 143a2eb7e1c54e0263210516b84471b5 251 Gene3D G3DSA:3.40.190.10 100 188 3.7E-6 T 22-04-2016 SMGD1_RS04140 66176f62cbd68a775dcc21bb852fd4d4 148 Pfam PF00156 Phosphoribosyl transferase domain 18 142 4.0E-21 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 SMGD1_RS04140 66176f62cbd68a775dcc21bb852fd4d4 148 Gene3D G3DSA:3.40.50.2020 3 144 3.1E-29 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SMGD1_RS04140 66176f62cbd68a775dcc21bb852fd4d4 148 SUPERFAMILY SSF53271 3 135 3.8E-24 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SMGD1_RS04140 66176f62cbd68a775dcc21bb852fd4d4 148 PANTHER PTHR22573:SF51 17 143 3.4E-21 T 22-04-2016 SMGD1_RS04140 66176f62cbd68a775dcc21bb852fd4d4 148 PANTHER PTHR22573 17 143 3.4E-21 T 22-04-2016 SMGD1_RS03565 c38496e54c62bcb46ee2dd86cf7b9254 430 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 230 262 - T 22-04-2016 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SMGD1_RS03565 c38496e54c62bcb46ee2dd86cf7b9254 430 Gene3D G3DSA:3.40.50.1980 27 224 1.6E-78 T 22-04-2016 SMGD1_RS03565 c38496e54c62bcb46ee2dd86cf7b9254 430 SUPERFAMILY SSF53720 27 428 1.28E-79 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 SMGD1_RS03565 c38496e54c62bcb46ee2dd86cf7b9254 430 PRINTS PR00083 Histidinol dehydrogenase signature 230 251 2.9E-81 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SMGD1_RS03565 c38496e54c62bcb46ee2dd86cf7b9254 430 PRINTS PR00083 Histidinol dehydrogenase signature 201 226 2.9E-81 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SMGD1_RS03565 c38496e54c62bcb46ee2dd86cf7b9254 430 PRINTS PR00083 Histidinol dehydrogenase signature 137 163 2.9E-81 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SMGD1_RS03565 c38496e54c62bcb46ee2dd86cf7b9254 430 PRINTS PR00083 Histidinol dehydrogenase signature 252 271 2.9E-81 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SMGD1_RS03565 c38496e54c62bcb46ee2dd86cf7b9254 430 PRINTS PR00083 Histidinol dehydrogenase signature 362 380 2.9E-81 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SMGD1_RS03565 c38496e54c62bcb46ee2dd86cf7b9254 430 PRINTS PR00083 Histidinol dehydrogenase signature 321 346 2.9E-81 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SMGD1_RS03565 c38496e54c62bcb46ee2dd86cf7b9254 430 PRINTS PR00083 Histidinol dehydrogenase signature 33 57 2.9E-81 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SMGD1_RS03565 c38496e54c62bcb46ee2dd86cf7b9254 430 PRINTS PR00083 Histidinol dehydrogenase signature 171 197 2.9E-81 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SMGD1_RS03565 c38496e54c62bcb46ee2dd86cf7b9254 430 PIRSF PIRSF000099 2 430 2.4E-172 T 22-04-2016 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SMGD1_RS03565 c38496e54c62bcb46ee2dd86cf7b9254 430 PANTHER PTHR21256 11 430 6.6E-200 T 22-04-2016 SMGD1_RS03565 c38496e54c62bcb46ee2dd86cf7b9254 430 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 5 428 40.383 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SMGD1_RS03565 c38496e54c62bcb46ee2dd86cf7b9254 430 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 33 427 3.8E-166 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SMGD1_RS03565 c38496e54c62bcb46ee2dd86cf7b9254 430 Gene3D G3DSA:3.40.50.1980 225 374 2.9E-67 T 22-04-2016 SMGD1_RS03565 c38496e54c62bcb46ee2dd86cf7b9254 430 Pfam PF00815 Histidinol dehydrogenase 20 428 2.2E-171 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SMGD1_RS07655 af641a937fa4a4b91e4a1655d11ac0e5 407 Gene3D G3DSA:3.40.50.920 261 386 1.4E-34 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 SMGD1_RS07655 af641a937fa4a4b91e4a1655d11ac0e5 407 SUPERFAMILY SSF52518 11 259 1.03E-64 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SMGD1_RS07655 af641a937fa4a4b91e4a1655d11ac0e5 407 PANTHER PTHR32154 9 389 1.7E-141 T 22-04-2016 SMGD1_RS07655 af641a937fa4a4b91e4a1655d11ac0e5 407 SUPERFAMILY SSF52922 261 394 1.96E-34 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 SMGD1_RS07655 af641a937fa4a4b91e4a1655d11ac0e5 407 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 23 237 1.4E-66 T 22-04-2016 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 SMGD1_RS07655 af641a937fa4a4b91e4a1655d11ac0e5 407 Gene3D G3DSA:3.40.50.970 10 259 1.0E-78 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SMGD1_RS07655 af641a937fa4a4b91e4a1655d11ac0e5 407 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 270 372 4.7E-24 T 22-04-2016 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II SMGD1_RS07655 af641a937fa4a4b91e4a1655d11ac0e5 407 PANTHER PTHR32154:SF21 9 389 1.7E-141 T 22-04-2016 SMGD1_RS12055 765839188e9e702284642990314e549a 451 Pfam PF03573 outer membrane porin, OprD family 107 450 4.9E-12 T 22-04-2016 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 SMGD1_RS12055 765839188e9e702284642990314e549a 451 SUPERFAMILY SSF56935 258 451 2.47E-6 T 22-04-2016 SMGD1_RS12055 765839188e9e702284642990314e549a 451 SUPERFAMILY SSF56935 37 165 2.47E-6 T 22-04-2016 SMGD1_RS12055 765839188e9e702284642990314e549a 451 Gene3D G3DSA:2.40.160.10 36 179 8.6E-43 T 22-04-2016 IPR023614 Porin domain SMGD1_RS12055 765839188e9e702284642990314e549a 451 Gene3D G3DSA:2.40.160.10 211 451 8.6E-43 T 22-04-2016 IPR023614 Porin domain SMGD1_RS07455 a1063b5589132a69392af0ff51fa16ae 187 PANTHER PTHR30461:SF9 3 182 3.0E-49 T 22-04-2016 SMGD1_RS07455 a1063b5589132a69392af0ff51fa16ae 187 Pfam PF00239 Resolvase, N terminal domain 3 136 1.6E-44 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 SMGD1_RS07455 a1063b5589132a69392af0ff51fa16ae 187 SMART SM00857 2 137 9.7E-57 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 SMGD1_RS07455 a1063b5589132a69392af0ff51fa16ae 187 Gene3D G3DSA:3.40.50.1390 2 120 5.5E-43 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 SMGD1_RS07455 a1063b5589132a69392af0ff51fa16ae 187 Pfam PF04218 CENP-B N-terminal DNA-binding domain 141 181 3.4E-6 T 22-04-2016 IPR007889 DNA binding HTH domain, Psq-type GO:0003677 SMGD1_RS07455 a1063b5589132a69392af0ff51fa16ae 187 ProSitePatterns PS00397 Site-specific recombinases active site. 5 13 - T 22-04-2016 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 SMGD1_RS07455 a1063b5589132a69392af0ff51fa16ae 187 Gene3D G3DSA:1.10.10.60 148 182 2.4E-4 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SMGD1_RS07455 a1063b5589132a69392af0ff51fa16ae 187 PANTHER PTHR30461 3 182 3.0E-49 T 22-04-2016 SMGD1_RS07455 a1063b5589132a69392af0ff51fa16ae 187 SUPERFAMILY SSF53041 1 136 9.16E-45 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 SMGD1_RS10035 a1063b5589132a69392af0ff51fa16ae 187 PANTHER PTHR30461:SF9 3 182 3.0E-49 T 22-04-2016 SMGD1_RS10035 a1063b5589132a69392af0ff51fa16ae 187 Pfam PF00239 Resolvase, N terminal domain 3 136 1.6E-44 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 SMGD1_RS10035 a1063b5589132a69392af0ff51fa16ae 187 SMART SM00857 2 137 9.7E-57 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 SMGD1_RS10035 a1063b5589132a69392af0ff51fa16ae 187 Gene3D G3DSA:3.40.50.1390 2 120 5.5E-43 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 SMGD1_RS10035 a1063b5589132a69392af0ff51fa16ae 187 Pfam PF04218 CENP-B N-terminal DNA-binding domain 141 181 3.4E-6 T 22-04-2016 IPR007889 DNA binding HTH domain, Psq-type GO:0003677 SMGD1_RS10035 a1063b5589132a69392af0ff51fa16ae 187 ProSitePatterns PS00397 Site-specific recombinases active site. 5 13 - T 22-04-2016 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 SMGD1_RS10035 a1063b5589132a69392af0ff51fa16ae 187 Gene3D G3DSA:1.10.10.60 148 182 2.4E-4 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SMGD1_RS10035 a1063b5589132a69392af0ff51fa16ae 187 PANTHER PTHR30461 3 182 3.0E-49 T 22-04-2016 SMGD1_RS10035 a1063b5589132a69392af0ff51fa16ae 187 SUPERFAMILY SSF53041 1 136 9.16E-45 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 SMGD1_RS00535 45bc75f9eac219d257fb3a50752485c3 612 Pfam PF09107 Elongation factor SelB, winged helix 563 607 8.3E-13 T 22-04-2016 IPR015191 Translation elongation factor SelB, winged helix, type 3 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 SMGD1_RS00535 45bc75f9eac219d257fb3a50752485c3 612 PANTHER PTHR23115:SF129 5 525 9.4E-83 T 22-04-2016 SMGD1_RS00535 45bc75f9eac219d257fb3a50752485c3 612 SUPERFAMILY SSF46785 560 608 1.63E-8 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMGD1_RS00535 45bc75f9eac219d257fb3a50752485c3 612 Gene3D G3DSA:2.40.30.10 177 259 2.2E-21 T 22-04-2016 SMGD1_RS00535 45bc75f9eac219d257fb3a50752485c3 612 Gene3D G3DSA:3.40.50.300 5 143 9.5E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS00535 45bc75f9eac219d257fb3a50752485c3 612 SUPERFAMILY SSF50465 278 354 1.32E-5 T 22-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal SMGD1_RS00535 45bc75f9eac219d257fb3a50752485c3 612 TIGRFAM TIGR00475 selB: selenocysteine-specific translation elongation factor 5 608 2.3E-87 T 22-04-2016 IPR004535 Translation elongation factor, selenocysteine-specific GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 SMGD1_RS00535 45bc75f9eac219d257fb3a50752485c3 612 SUPERFAMILY SSF52540 4 192 2.26E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS00535 45bc75f9eac219d257fb3a50752485c3 612 SUPERFAMILY SSF50447 174 259 6.36E-17 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain SMGD1_RS00535 45bc75f9eac219d257fb3a50752485c3 612 Gene3D G3DSA:1.10.10.10 553 608 1.5E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMGD1_RS00535 45bc75f9eac219d257fb3a50752485c3 612 PANTHER PTHR23115 5 525 9.4E-83 T 22-04-2016 SMGD1_RS00535 45bc75f9eac219d257fb3a50752485c3 612 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 3 128 3.7E-12 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SMGD1_RS00535 45bc75f9eac219d257fb3a50752485c3 612 Pfam PF00009 Elongation factor Tu GTP binding domain 5 206 1.1E-28 T 22-04-2016 SMGD1_RS00535 45bc75f9eac219d257fb3a50752485c3 612 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 29 44 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site SMGD1_RS04035 361bdf963d562ad66b8baf0e6a9a6fe4 1088 Pfam PF00512 His Kinase A (phospho-acceptor) domain 405 468 1.8E-21 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS04035 361bdf963d562ad66b8baf0e6a9a6fe4 1088 PANTHER PTHR24423:SF382 383 637 7.8E-138 T 22-04-2016 SMGD1_RS04035 361bdf963d562ad66b8baf0e6a9a6fe4 1088 PANTHER PTHR24423:SF382 771 954 7.8E-138 T 22-04-2016 SMGD1_RS04035 361bdf963d562ad66b8baf0e6a9a6fe4 1088 PANTHER PTHR24423:SF382 17 24 7.8E-138 T 22-04-2016 SMGD1_RS04035 361bdf963d562ad66b8baf0e6a9a6fe4 1088 SMART SM00388 404 469 1.3E-26 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS04035 361bdf963d562ad66b8baf0e6a9a6fe4 1088 SMART SM00448 787 903 8.7E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS04035 361bdf963d562ad66b8baf0e6a9a6fe4 1088 Gene3D G3DSA:1.10.287.130 396 454 1.2E-21 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS04035 361bdf963d562ad66b8baf0e6a9a6fe4 1088 SUPERFAMILY SSF52172 787 907 1.99E-33 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS04035 361bdf963d562ad66b8baf0e6a9a6fe4 1088 Gene3D G3DSA:3.40.50.2300 786 908 8.4E-37 T 22-04-2016 SMGD1_RS04035 361bdf963d562ad66b8baf0e6a9a6fe4 1088 Pfam PF08376 Nitrate and nitrite sensing 54 302 3.2E-25 T 22-04-2016 IPR013587 Nitrate/nitrite sensing protein SMGD1_RS04035 361bdf963d562ad66b8baf0e6a9a6fe4 1088 SUPERFAMILY SSF52172 971 1042 9.53E-5 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS04035 361bdf963d562ad66b8baf0e6a9a6fe4 1088 SUPERFAMILY SSF47384 390 470 9.61E-23 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS04035 361bdf963d562ad66b8baf0e6a9a6fe4 1088 PANTHER PTHR24423 383 637 7.8E-138 T 22-04-2016 SMGD1_RS04035 361bdf963d562ad66b8baf0e6a9a6fe4 1088 PANTHER PTHR24423 771 954 7.8E-138 T 22-04-2016 SMGD1_RS04035 361bdf963d562ad66b8baf0e6a9a6fe4 1088 PANTHER PTHR24423 17 24 7.8E-138 T 22-04-2016 SMGD1_RS04035 361bdf963d562ad66b8baf0e6a9a6fe4 1088 Gene3D G3DSA:3.40.50.2300 972 1042 8.6E-4 T 22-04-2016 SMGD1_RS04035 361bdf963d562ad66b8baf0e6a9a6fe4 1088 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 516 633 2.3E-26 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS04035 361bdf963d562ad66b8baf0e6a9a6fe4 1088 Pfam PF00072 Response regulator receiver domain 789 903 1.7E-21 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS04035 361bdf963d562ad66b8baf0e6a9a6fe4 1088 SUPERFAMILY SSF55874 458 630 3.41E-41 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS04035 361bdf963d562ad66b8baf0e6a9a6fe4 1088 Gene3D G3DSA:3.30.565.10 455 633 3.1E-42 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS04035 361bdf963d562ad66b8baf0e6a9a6fe4 1088 PRINTS PR00344 Bacterial sensor protein C-terminal signature 594 612 2.3E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS04035 361bdf963d562ad66b8baf0e6a9a6fe4 1088 PRINTS PR00344 Bacterial sensor protein C-terminal signature 559 573 2.3E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS04035 361bdf963d562ad66b8baf0e6a9a6fe4 1088 PRINTS PR00344 Bacterial sensor protein C-terminal signature 618 631 2.3E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS04035 361bdf963d562ad66b8baf0e6a9a6fe4 1088 PRINTS PR00344 Bacterial sensor protein C-terminal signature 577 587 2.3E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS04035 361bdf963d562ad66b8baf0e6a9a6fe4 1088 SMART SM00387 516 634 7.2E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS04460 cef97e47065f2a5cec3a3efdb75a5e08 123 Gene3D G3DSA:3.30.1390.10 53 123 4.3E-31 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like SMGD1_RS04460 cef97e47065f2a5cec3a3efdb75a5e08 123 SUPERFAMILY SSF48300 4 59 2.35E-16 T 22-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS04460 cef97e47065f2a5cec3a3efdb75a5e08 123 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 57 123 4.3E-28 T 22-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 SMGD1_RS04460 cef97e47065f2a5cec3a3efdb75a5e08 123 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 123 24.199 T 22-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS04460 cef97e47065f2a5cec3a3efdb75a5e08 123 SUPERFAMILY SSF54736 52 123 1.24E-23 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like SMGD1_RS04460 cef97e47065f2a5cec3a3efdb75a5e08 123 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 123 9.7E-45 T 22-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS04460 cef97e47065f2a5cec3a3efdb75a5e08 123 Gene3D G3DSA:1.20.5.710 2 52 1.0E-20 T 22-04-2016 SMGD1_RS04460 cef97e47065f2a5cec3a3efdb75a5e08 123 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 50 2.6E-19 T 22-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS04460 cef97e47065f2a5cec3a3efdb75a5e08 123 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 59 102 2.0E-13 T 22-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 SMGD1_RS06100 4718bcbb6051ca2b61c2b03be34261ca 254 Pfam PF00005 ABC transporter 23 170 9.5E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMGD1_RS06100 4718bcbb6051ca2b61c2b03be34261ca 254 PANTHER PTHR24220:SF566 9 223 8.2E-71 T 22-04-2016 SMGD1_RS06100 4718bcbb6051ca2b61c2b03be34261ca 254 PANTHER PTHR24220 9 223 8.2E-71 T 22-04-2016 SMGD1_RS06100 4718bcbb6051ca2b61c2b03be34261ca 254 SUPERFAMILY SSF52540 7 231 5.52E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS06100 4718bcbb6051ca2b61c2b03be34261ca 254 Gene3D G3DSA:3.40.50.300 7 232 1.2E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS06100 4718bcbb6051ca2b61c2b03be34261ca 254 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMGD1_RS06100 4718bcbb6051ca2b61c2b03be34261ca 254 SMART SM00382 32 227 5.9E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain SMGD1_RS10725 e0bf6ea9db7e7ddf50c25c05bbda37d0 366 Gene3D G3DSA:3.30.565.10 218 363 7.9E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS10725 e0bf6ea9db7e7ddf50c25c05bbda37d0 366 SUPERFAMILY SSF47384 139 212 3.34E-5 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS10725 e0bf6ea9db7e7ddf50c25c05bbda37d0 366 SMART SM00448 8 122 2.2E-38 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS10725 e0bf6ea9db7e7ddf50c25c05bbda37d0 366 Pfam PF00072 Response regulator receiver domain 10 122 3.5E-31 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS10725 e0bf6ea9db7e7ddf50c25c05bbda37d0 366 SUPERFAMILY SSF52172 7 127 1.71E-38 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS10725 e0bf6ea9db7e7ddf50c25c05bbda37d0 366 PANTHER PTHR24423 1 165 8.3E-40 T 22-04-2016 SMGD1_RS10725 e0bf6ea9db7e7ddf50c25c05bbda37d0 366 SMART SM00387 253 366 3.2E-7 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS10725 e0bf6ea9db7e7ddf50c25c05bbda37d0 366 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 257 365 5.2E-11 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS10725 e0bf6ea9db7e7ddf50c25c05bbda37d0 366 Gene3D G3DSA:3.40.50.2300 7 127 1.1E-39 T 22-04-2016 SMGD1_RS10725 e0bf6ea9db7e7ddf50c25c05bbda37d0 366 SUPERFAMILY SSF55874 215 363 1.83E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS02100 3d7723f034e30a1954a3fab0243d07c9 744 Pfam PF08376 Nitrate and nitrite sensing 56 285 9.1E-43 T 22-04-2016 IPR013587 Nitrate/nitrite sensing protein SMGD1_RS02100 3d7723f034e30a1954a3fab0243d07c9 744 PANTHER PTHR32089 293 382 1.2E-44 T 22-04-2016 SMGD1_RS02100 3d7723f034e30a1954a3fab0243d07c9 744 PANTHER PTHR32089 405 626 1.2E-44 T 22-04-2016 SMGD1_RS02100 3d7723f034e30a1954a3fab0243d07c9 744 SMART SM00283 434 653 3.4E-23 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SMGD1_RS02100 3d7723f034e30a1954a3fab0243d07c9 744 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 480 628 1.1E-35 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SMGD1_RS02100 3d7723f034e30a1954a3fab0243d07c9 744 Gene3D G3DSA:1.10.287.950 446 638 2.7E-46 T 22-04-2016 SMGD1_RS02100 3d7723f034e30a1954a3fab0243d07c9 744 SUPERFAMILY SSF58104 426 649 8.37E-48 T 22-04-2016 SMGD1_RS02100 3d7723f034e30a1954a3fab0243d07c9 744 SUPERFAMILY SSF58104 355 381 8.37E-48 T 22-04-2016 SMGD1_RS02100 3d7723f034e30a1954a3fab0243d07c9 744 Pfam PF13682 Chemoreceptor zinc-binding domain 637 700 3.6E-11 T 22-04-2016 IPR025991 Chemoreceptor zinc-binding domain UniPathway: UPA00599 SMGD1_RS10930 327e54dd6f503efc6fd2c940a2e3d7e3 241 PANTHER PTHR10108:SF24 2 221 7.7E-38 T 22-04-2016 SMGD1_RS10930 327e54dd6f503efc6fd2c940a2e3d7e3 241 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 23 38 - T 22-04-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 SMGD1_RS10930 327e54dd6f503efc6fd2c940a2e3d7e3 241 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 12 240 2.8E-68 T 22-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 SMGD1_RS10930 327e54dd6f503efc6fd2c940a2e3d7e3 241 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 3 240 30.015 T 22-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 SMGD1_RS10930 327e54dd6f503efc6fd2c940a2e3d7e3 241 Pfam PF01209 ubiE/COQ5 methyltransferase family 7 235 2.3E-43 T 22-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 SMGD1_RS10930 327e54dd6f503efc6fd2c940a2e3d7e3 241 SUPERFAMILY SSF53335 10 236 7.17E-33 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS10930 327e54dd6f503efc6fd2c940a2e3d7e3 241 PANTHER PTHR10108 2 221 7.7E-38 T 22-04-2016 SMGD1_RS10930 327e54dd6f503efc6fd2c940a2e3d7e3 241 Gene3D G3DSA:3.40.50.150 12 233 1.8E-34 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS01645 b7efea903bd57bf88a47fce51085b47c 72 PRINTS PR00050 Cold shock protein signature 7 22 1.4E-16 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SMGD1_RS01645 b7efea903bd57bf88a47fce51085b47c 72 PRINTS PR00050 Cold shock protein signature 28 37 1.4E-16 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SMGD1_RS01645 b7efea903bd57bf88a47fce51085b47c 72 PRINTS PR00050 Cold shock protein signature 45 63 1.4E-16 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SMGD1_RS01645 b7efea903bd57bf88a47fce51085b47c 72 PANTHER PTHR11544 5 72 1.1E-29 T 22-04-2016 SMGD1_RS01645 b7efea903bd57bf88a47fce51085b47c 72 SMART SM00357 6 72 5.9E-27 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 SMGD1_RS01645 b7efea903bd57bf88a47fce51085b47c 72 Pfam PF00313 'Cold-shock' DNA-binding domain 6 71 4.4E-28 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SMGD1_RS01645 b7efea903bd57bf88a47fce51085b47c 72 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 22-04-2016 IPR019844 Cold-shock conserved site SMGD1_RS01645 b7efea903bd57bf88a47fce51085b47c 72 PIRSF PIRSF002599 1 72 8.6E-25 T 22-04-2016 IPR012156 Cold shock, CspA GO:0003676 SMGD1_RS01645 b7efea903bd57bf88a47fce51085b47c 72 SUPERFAMILY SSF50249 3 71 5.92E-24 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMGD1_RS01645 b7efea903bd57bf88a47fce51085b47c 72 Gene3D G3DSA:2.40.50.140 5 70 6.6E-28 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMGD1_RS05285 bf7112857b1ffee3a58c5dae4f52c662 275 PANTHER PTHR30244:SF1 3 275 7.7E-84 T 22-04-2016 SMGD1_RS05285 bf7112857b1ffee3a58c5dae4f52c662 275 Pfam PF00700 Bacterial flagellin C-terminal helical region 193 274 2.1E-25 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SMGD1_RS05285 bf7112857b1ffee3a58c5dae4f52c662 275 PANTHER PTHR30244 3 275 7.7E-84 T 22-04-2016 SMGD1_RS05285 bf7112857b1ffee3a58c5dae4f52c662 275 Gene3D G3DSA:1.20.1330.10 55 231 2.8E-48 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SMGD1_RS05285 bf7112857b1ffee3a58c5dae4f52c662 275 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 1.7E-38 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SMGD1_RS05285 bf7112857b1ffee3a58c5dae4f52c662 275 SUPERFAMILY SSF64518 1 275 2.22E-75 T 22-04-2016 SMGD1_RS05285 bf7112857b1ffee3a58c5dae4f52c662 275 PRINTS PR00207 Flagellin signature 76 95 1.0E-21 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 SMGD1_RS05285 bf7112857b1ffee3a58c5dae4f52c662 275 PRINTS PR00207 Flagellin signature 37 54 1.0E-21 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 SMGD1_RS05285 bf7112857b1ffee3a58c5dae4f52c662 275 PRINTS PR00207 Flagellin signature 111 134 1.0E-21 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 SMGD1_RS02080 07c48385c7e1bd08a162ab482cf81b92 363 PANTHER PTHR22939 22 168 6.1E-43 T 22-04-2016 SMGD1_RS02080 07c48385c7e1bd08a162ab482cf81b92 363 SUPERFAMILY SSF69635 209 351 8.95E-24 T 22-04-2016 SMGD1_RS02080 07c48385c7e1bd08a162ab482cf81b92 363 Gene3D G3DSA:2.40.10.10 18 94 1.0E-15 T 22-04-2016 SMGD1_RS02080 07c48385c7e1bd08a162ab482cf81b92 363 PANTHER PTHR22939:SF79 22 168 6.1E-43 T 22-04-2016 SMGD1_RS02080 07c48385c7e1bd08a162ab482cf81b92 363 Gene3D G3DSA:2.40.10.10 95 180 3.8E-27 T 22-04-2016 SMGD1_RS02080 07c48385c7e1bd08a162ab482cf81b92 363 SUPERFAMILY SSF50494 6 178 1.08E-44 T 22-04-2016 IPR009003 Peptidase S1, PA clan SMGD1_RS02080 07c48385c7e1bd08a162ab482cf81b92 363 PRINTS PR00834 HtrA/DegQ protease family signature 145 162 7.3E-20 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SMGD1_RS02080 07c48385c7e1bd08a162ab482cf81b92 363 PRINTS PR00834 HtrA/DegQ protease family signature 52 72 7.3E-20 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SMGD1_RS02080 07c48385c7e1bd08a162ab482cf81b92 363 PRINTS PR00834 HtrA/DegQ protease family signature 31 43 7.3E-20 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SMGD1_RS02080 07c48385c7e1bd08a162ab482cf81b92 363 PRINTS PR00834 HtrA/DegQ protease family signature 92 116 7.3E-20 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SMGD1_RS02080 07c48385c7e1bd08a162ab482cf81b92 363 Pfam PF13365 Trypsin-like peptidase domain 24 152 2.9E-21 T 22-04-2016 SMGD1_RS02080 07c48385c7e1bd08a162ab482cf81b92 363 Gene3D G3DSA:3.30.1460.10 239 353 1.5E-11 T 22-04-2016 SMGD1_RS00840 37283220038c3b016ed78ef2f44dba23 187 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 5 176 4.1E-15 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase SMGD1_RS00840 37283220038c3b016ed78ef2f44dba23 187 PIRSF PIRSF006806 1 179 1.1E-23 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase SMGD1_RS00840 37283220038c3b016ed78ef2f44dba23 187 SUPERFAMILY SSF100950 4 181 2.37E-34 T 22-04-2016 SMGD1_RS00840 37283220038c3b016ed78ef2f44dba23 187 Gene3D G3DSA:3.40.50.10420 4 179 2.9E-30 T 22-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain SMGD1_RS00840 37283220038c3b016ed78ef2f44dba23 187 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 5 176 2.3E-33 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase SMGD1_RS06305 2f863b5e371408c94675f1ac8faac921 595 SUPERFAMILY SSF55073 171 329 1.18E-52 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS06305 2f863b5e371408c94675f1ac8faac921 595 SUPERFAMILY SSF55785 20 143 1.19E-10 T 22-04-2016 IPR000014 PAS domain SMGD1_RS06305 2f863b5e371408c94675f1ac8faac921 595 SUPERFAMILY SSF141868 343 591 9.42E-89 T 22-04-2016 IPR001633 EAL domain SMGD1_RS06305 2f863b5e371408c94675f1ac8faac921 595 PANTHER PTHR33121 166 172 1.6E-78 T 22-04-2016 SMGD1_RS06305 2f863b5e371408c94675f1ac8faac921 595 PANTHER PTHR33121 289 590 1.6E-78 T 22-04-2016 SMGD1_RS06305 2f863b5e371408c94675f1ac8faac921 595 Gene3D G3DSA:3.30.450.20 15 153 1.5E-11 T 22-04-2016 SMGD1_RS06305 2f863b5e371408c94675f1ac8faac921 595 Pfam PF00990 Diguanylate cyclase, GGDEF domain 166 323 1.9E-53 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS06305 2f863b5e371408c94675f1ac8faac921 595 Gene3D G3DSA:3.20.20.450 341 591 4.7E-95 T 22-04-2016 IPR001633 EAL domain SMGD1_RS06305 2f863b5e371408c94675f1ac8faac921 595 Pfam PF08448 PAS fold 22 142 3.9E-11 T 22-04-2016 IPR013656 PAS fold-4 SMGD1_RS06305 2f863b5e371408c94675f1ac8faac921 595 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 162 325 1.4E-48 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS06305 2f863b5e371408c94675f1ac8faac921 595 SMART SM00267 155 327 1.8E-71 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS06305 2f863b5e371408c94675f1ac8faac921 595 Pfam PF00563 EAL domain 343 578 6.6E-75 T 22-04-2016 IPR001633 EAL domain SMGD1_RS06305 2f863b5e371408c94675f1ac8faac921 595 SMART SM00052 337 583 1.2E-113 T 22-04-2016 IPR001633 EAL domain SMGD1_RS06305 2f863b5e371408c94675f1ac8faac921 595 Gene3D G3DSA:3.30.70.270 167 335 1.0E-60 T 22-04-2016 SMGD1_RS06305 2f863b5e371408c94675f1ac8faac921 595 PANTHER PTHR33121:SF13 166 172 1.6E-78 T 22-04-2016 SMGD1_RS06305 2f863b5e371408c94675f1ac8faac921 595 PANTHER PTHR33121:SF13 289 590 1.6E-78 T 22-04-2016 SMGD1_RS02365 91c40c5fd33739a1e4b0e66dfdd6661f 556 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 108 245 2.3E-8 T 22-04-2016 SMGD1_RS02855 f5d68012036e5878057b2dfecbdfb4ff 651 Gene3D G3DSA:2.30.38.10 438 518 2.4E-10 T 22-04-2016 SMGD1_RS02855 f5d68012036e5878057b2dfecbdfb4ff 651 Gene3D G3DSA:3.40.50.980 265 423 1.6E-29 T 22-04-2016 SMGD1_RS02855 f5d68012036e5878057b2dfecbdfb4ff 651 ProSitePatterns PS00455 Putative AMP-binding domain signature. 259 270 - T 22-04-2016 IPR020845 AMP-binding, conserved site SMGD1_RS02855 f5d68012036e5878057b2dfecbdfb4ff 651 SUPERFAMILY SSF56801 9 644 1.96E-170 T 22-04-2016 SMGD1_RS02855 f5d68012036e5878057b2dfecbdfb4ff 651 Pfam PF13193 AMP-binding enzyme C-terminal domain 533 612 6.5E-19 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain SMGD1_RS02855 f5d68012036e5878057b2dfecbdfb4ff 651 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 24 79 2.0E-19 T 22-04-2016 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 SMGD1_RS02855 f5d68012036e5878057b2dfecbdfb4ff 651 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 19 645 1.1E-287 T 22-04-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: REACT_13433 SMGD1_RS02855 f5d68012036e5878057b2dfecbdfb4ff 651 Pfam PF00501 AMP-binding enzyme 82 524 2.6E-89 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 SMGD1_RS02855 f5d68012036e5878057b2dfecbdfb4ff 651 Gene3D G3DSA:3.30.300.30 519 622 5.7E-23 T 22-04-2016 SMGD1_RS02855 f5d68012036e5878057b2dfecbdfb4ff 651 Gene3D G3DSA:3.40.50.980 78 264 4.2E-40 T 22-04-2016 SMGD1_RS02855 f5d68012036e5878057b2dfecbdfb4ff 651 PANTHER PTHR24095 17 649 4.9E-277 T 22-04-2016 SMGD1_RS02855 f5d68012036e5878057b2dfecbdfb4ff 651 PANTHER PTHR24095:SF116 17 649 4.9E-277 T 22-04-2016 SMGD1_RS00115 c426742a6ff698edb7b92004877330fc 565 SMART SM00448 9 122 5.7E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS00115 c426742a6ff698edb7b92004877330fc 565 Gene3D G3DSA:3.40.50.2300 7 134 3.3E-27 T 22-04-2016 SMGD1_RS00115 c426742a6ff698edb7b92004877330fc 565 PANTHER PTHR33121 279 565 2.9E-45 T 22-04-2016 SMGD1_RS00115 c426742a6ff698edb7b92004877330fc 565 PANTHER PTHR33121 127 164 2.9E-45 T 22-04-2016 SMGD1_RS00115 c426742a6ff698edb7b92004877330fc 565 Pfam PF00990 Diguanylate cyclase, GGDEF domain 168 310 8.8E-19 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS00115 c426742a6ff698edb7b92004877330fc 565 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 168 310 6.6E-18 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS00115 c426742a6ff698edb7b92004877330fc 565 SUPERFAMILY SSF141868 337 562 9.42E-62 T 22-04-2016 IPR001633 EAL domain SMGD1_RS00115 c426742a6ff698edb7b92004877330fc 565 Gene3D G3DSA:3.30.70.270 169 321 8.5E-24 T 22-04-2016 SMGD1_RS00115 c426742a6ff698edb7b92004877330fc 565 SUPERFAMILY SSF55073 172 311 3.14E-20 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS00115 c426742a6ff698edb7b92004877330fc 565 PANTHER PTHR33121:SF10 279 565 2.9E-45 T 22-04-2016 SMGD1_RS00115 c426742a6ff698edb7b92004877330fc 565 PANTHER PTHR33121:SF10 127 164 2.9E-45 T 22-04-2016 SMGD1_RS00115 c426742a6ff698edb7b92004877330fc 565 Pfam PF00563 EAL domain 337 561 5.8E-57 T 22-04-2016 IPR001633 EAL domain SMGD1_RS00115 c426742a6ff698edb7b92004877330fc 565 SMART SM00052 329 564 5.1E-47 T 22-04-2016 IPR001633 EAL domain SMGD1_RS00115 c426742a6ff698edb7b92004877330fc 565 Gene3D G3DSA:3.20.20.450 333 563 2.0E-63 T 22-04-2016 IPR001633 EAL domain SMGD1_RS00115 c426742a6ff698edb7b92004877330fc 565 Pfam PF00072 Response regulator receiver domain 12 123 6.9E-20 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS00115 c426742a6ff698edb7b92004877330fc 565 SMART SM00267 156 317 9.5E-23 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS00115 c426742a6ff698edb7b92004877330fc 565 SUPERFAMILY SSF52172 9 125 3.84E-28 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS00935 05ef079ff128d3fabd9c11f2b73b99c3 430 PIRSF PIRSF000429 1 430 2.9E-126 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 SMGD1_RS00935 05ef079ff128d3fabd9c11f2b73b99c3 430 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 8 428 6.5E-135 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 SMGD1_RS00935 05ef079ff128d3fabd9c11f2b73b99c3 430 PANTHER PTHR18919 1 430 3.0E-151 T 22-04-2016 SMGD1_RS00935 05ef079ff128d3fabd9c11f2b73b99c3 430 ProSitePatterns PS00737 Thiolases signature 2. 376 392 - T 22-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 SMGD1_RS00935 05ef079ff128d3fabd9c11f2b73b99c3 430 SUPERFAMILY SSF53901 6 289 2.34E-64 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SMGD1_RS00935 05ef079ff128d3fabd9c11f2b73b99c3 430 ProSitePatterns PS00099 Thiolases active site. 411 424 - T 22-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 SMGD1_RS00935 05ef079ff128d3fabd9c11f2b73b99c3 430 Pfam PF02803 Thiolase, C-terminal domain 291 428 7.4E-43 T 22-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 SMGD1_RS00935 05ef079ff128d3fabd9c11f2b73b99c3 430 Gene3D G3DSA:3.40.47.10 166 214 7.2E-54 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SMGD1_RS00935 05ef079ff128d3fabd9c11f2b73b99c3 430 Gene3D G3DSA:3.40.47.10 297 429 7.2E-54 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SMGD1_RS00935 05ef079ff128d3fabd9c11f2b73b99c3 430 SUPERFAMILY SSF53901 291 428 5.76E-37 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SMGD1_RS00935 05ef079ff128d3fabd9c11f2b73b99c3 430 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 22-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 SMGD1_RS00935 05ef079ff128d3fabd9c11f2b73b99c3 430 Pfam PF00108 Thiolase, N-terminal domain 6 283 2.6E-71 T 22-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 SMGD1_RS00935 05ef079ff128d3fabd9c11f2b73b99c3 430 Gene3D G3DSA:3.40.47.10 215 295 4.0E-61 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SMGD1_RS00935 05ef079ff128d3fabd9c11f2b73b99c3 430 Gene3D G3DSA:3.40.47.10 6 125 4.0E-61 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SMGD1_RS12235 47617f34e9c768bb2213d42b78045718 158 Pfam PF01966 HD domain 31 116 1.4E-8 T 22-04-2016 IPR006674 HD domain SMGD1_RS12235 47617f34e9c768bb2213d42b78045718 158 Gene3D G3DSA:1.10.3210.10 23 114 1.5E-5 T 22-04-2016 IPR006674 HD domain SMGD1_RS12235 47617f34e9c768bb2213d42b78045718 158 SUPERFAMILY SSF109604 24 131 2.92E-12 T 22-04-2016 SMGD1_RS00805 e5042a83a34c37168d7863bebf3ae3f8 197 PANTHER PTHR11935 1 193 5.1E-39 T 22-04-2016 SMGD1_RS00805 e5042a83a34c37168d7863bebf3ae3f8 197 Pfam PF00753 Metallo-beta-lactamase superfamily 9 177 1.4E-24 T 22-04-2016 IPR001279 Metallo-beta-lactamase SMGD1_RS00805 e5042a83a34c37168d7863bebf3ae3f8 197 Gene3D G3DSA:3.60.15.10 1 189 9.2E-45 T 22-04-2016 IPR001279 Metallo-beta-lactamase SMGD1_RS00805 e5042a83a34c37168d7863bebf3ae3f8 197 SUPERFAMILY SSF56281 5 194 4.57E-46 T 22-04-2016 IPR001279 Metallo-beta-lactamase SMGD1_RS00805 e5042a83a34c37168d7863bebf3ae3f8 197 SMART SM00849 12 177 2.0E-34 T 22-04-2016 IPR001279 Metallo-beta-lactamase SMGD1_RS03610 8d1ef73aeec8bfbfefdb228d7ee76f43 224 SMART SM01211 1 222 2.0E-113 T 22-04-2016 SMGD1_RS03610 8d1ef73aeec8bfbfefdb228d7ee76f43 224 PIRSF PIRSF001586 1 224 1.0E-82 T 22-04-2016 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SMGD1_RS03610 8d1ef73aeec8bfbfefdb228d7ee76f43 224 TIGRFAM TIGR01737 FGAM_synth_I: phosphoribosylformylglycinamidine synthase I 1 223 1.8E-93 T 22-04-2016 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SMGD1_RS03610 8d1ef73aeec8bfbfefdb228d7ee76f43 224 Hamap MF_00421 Phosphoribosylformylglycinamidine synthase subunit PurQ [purQ]. 1 223 42.236 T 22-04-2016 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SMGD1_RS03610 8d1ef73aeec8bfbfefdb228d7ee76f43 224 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 2 207 4.5E-45 T 22-04-2016 SMGD1_RS03610 8d1ef73aeec8bfbfefdb228d7ee76f43 224 PANTHER PTHR10099 1 223 7.8E-105 T 22-04-2016 SMGD1_RS03610 8d1ef73aeec8bfbfefdb228d7ee76f43 224 Gene3D G3DSA:3.40.50.880 1 224 3.2E-41 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SMGD1_RS03610 8d1ef73aeec8bfbfefdb228d7ee76f43 224 SUPERFAMILY SSF52317 1 223 1.11E-73 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SMGD1_RS02710 98d2cad3730c665c4f2a1f52bd68e992 168 Pfam PF04608 Phosphatidylglycerophosphatase A 4 157 1.3E-41 T 22-04-2016 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 SMGD1_RS02710 98d2cad3730c665c4f2a1f52bd68e992 168 SUPERFAMILY SSF101307 3 158 1.7E-33 T 22-04-2016 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 SMGD1_RS02710 98d2cad3730c665c4f2a1f52bd68e992 168 PIRSF PIRSF006162 1 165 2.6E-40 T 22-04-2016 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 SMGD1_RS02710 98d2cad3730c665c4f2a1f52bd68e992 168 PANTHER PTHR36305 11 163 4.5E-26 T 22-04-2016 SMGD1_RS02710 98d2cad3730c665c4f2a1f52bd68e992 168 Gene3D G3DSA:1.10.3760.10 111 157 2.4E-7 T 22-04-2016 IPR027416 YutG-like domain SMGD1_RS12960 9001ac88f8ed65a448e918b1b0ce8c43 317 Pfam PF01207 Dihydrouridine synthase (Dus) 13 309 5.9E-82 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 SMGD1_RS12960 9001ac88f8ed65a448e918b1b0ce8c43 317 SUPERFAMILY SSF51395 12 311 2.56E-79 T 22-04-2016 SMGD1_RS12960 9001ac88f8ed65a448e918b1b0ce8c43 317 PIRSF PIRSF006621 1 316 1.3E-89 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 SMGD1_RS12960 9001ac88f8ed65a448e918b1b0ce8c43 317 Gene3D G3DSA:1.10.1200.80 249 313 1.7E-20 T 22-04-2016 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 SMGD1_RS12960 9001ac88f8ed65a448e918b1b0ce8c43 317 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 13 311 2.2E-92 T 22-04-2016 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 SMGD1_RS12960 9001ac88f8ed65a448e918b1b0ce8c43 317 PANTHER PTHR11082 9 315 1.4E-115 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 SMGD1_RS12960 9001ac88f8ed65a448e918b1b0ce8c43 317 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 95 113 - T 22-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 SMGD1_RS12960 9001ac88f8ed65a448e918b1b0ce8c43 317 PANTHER PTHR11082:SF25 9 315 1.4E-115 T 22-04-2016 SMGD1_RS12960 9001ac88f8ed65a448e918b1b0ce8c43 317 Gene3D G3DSA:3.20.20.70 10 243 5.7E-77 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMGD1_RS13745 d1ef9d308055e71df364182d0572b689 428 SUPERFAMILY SSF56954 4 427 1.11E-71 T 22-04-2016 SMGD1_RS13745 d1ef9d308055e71df364182d0572b689 428 PANTHER PTHR30026:SF4 1 427 4.0E-38 T 22-04-2016 SMGD1_RS13745 d1ef9d308055e71df364182d0572b689 428 Gene3D G3DSA:1.20.1600.10 20 427 2.4E-63 T 22-04-2016 SMGD1_RS13745 d1ef9d308055e71df364182d0572b689 428 PANTHER PTHR30026 1 427 4.0E-38 T 22-04-2016 SMGD1_RS13745 d1ef9d308055e71df364182d0572b689 428 Pfam PF02321 Outer membrane efflux protein 242 427 5.7E-31 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SMGD1_RS13745 d1ef9d308055e71df364182d0572b689 428 Pfam PF02321 Outer membrane efflux protein 23 211 9.8E-28 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SMGD1_RS03865 14115e07f15958671405ff332ac1d151 240 PANTHER PTHR13799 1 240 4.0E-44 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 SMGD1_RS03865 14115e07f15958671405ff332ac1d151 240 SUPERFAMILY SSF102705 1 239 2.75E-64 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 SMGD1_RS03865 14115e07f15958671405ff332ac1d151 240 PANTHER PTHR13799:SF13 1 240 4.0E-44 T 22-04-2016 SMGD1_RS03865 14115e07f15958671405ff332ac1d151 240 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 1 227 3.2E-50 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 SMGD1_RS03865 14115e07f15958671405ff332ac1d151 240 Gene3D G3DSA:3.40.1390.30 120 205 3.0E-20 T 22-04-2016 SMGD1_RS03865 14115e07f15958671405ff332ac1d151 240 Gene3D G3DSA:3.40.1390.30 1 111 1.6E-30 T 22-04-2016 SMGD1_RS03865 14115e07f15958671405ff332ac1d151 240 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 5 222 2.6E-62 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 SMGD1_RS09465 7abd55d30995182bbd8e952e3d23c6ab 645 Pfam PF00512 His Kinase A (phospho-acceptor) domain 158 222 2.3E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS09465 7abd55d30995182bbd8e952e3d23c6ab 645 PRINTS PR00344 Bacterial sensor protein C-terminal signature 312 326 3.9E-6 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS09465 7abd55d30995182bbd8e952e3d23c6ab 645 PRINTS PR00344 Bacterial sensor protein C-terminal signature 343 361 3.9E-6 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS09465 7abd55d30995182bbd8e952e3d23c6ab 645 PRINTS PR00344 Bacterial sensor protein C-terminal signature 367 380 3.9E-6 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS09465 7abd55d30995182bbd8e952e3d23c6ab 645 Pfam PF00072 Response regulator receiver domain 525 636 3.5E-21 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS09465 7abd55d30995182bbd8e952e3d23c6ab 645 SUPERFAMILY SSF55874 212 379 7.99E-30 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS09465 7abd55d30995182bbd8e952e3d23c6ab 645 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 271 380 4.6E-16 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS09465 7abd55d30995182bbd8e952e3d23c6ab 645 Gene3D G3DSA:3.40.50.2300 521 641 1.8E-35 T 22-04-2016 SMGD1_RS09465 7abd55d30995182bbd8e952e3d23c6ab 645 SMART SM00388 157 222 2.8E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS09465 7abd55d30995182bbd8e952e3d23c6ab 645 SUPERFAMILY SSF52172 521 641 2.7E-31 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS09465 7abd55d30995182bbd8e952e3d23c6ab 645 SMART SM00448 522 636 1.0E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS09465 7abd55d30995182bbd8e952e3d23c6ab 645 PANTHER PTHR24423 26 386 6.9E-109 T 22-04-2016 SMGD1_RS09465 7abd55d30995182bbd8e952e3d23c6ab 645 PANTHER PTHR24423 484 641 6.9E-109 T 22-04-2016 SMGD1_RS09465 7abd55d30995182bbd8e952e3d23c6ab 645 SUPERFAMILY SSF47384 144 223 1.43E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS09465 7abd55d30995182bbd8e952e3d23c6ab 645 Gene3D G3DSA:3.30.565.10 208 383 1.1E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS09465 7abd55d30995182bbd8e952e3d23c6ab 645 Gene3D G3DSA:1.10.287.130 150 207 8.4E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS09465 7abd55d30995182bbd8e952e3d23c6ab 645 SMART SM00387 269 385 3.8E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS11435 aa93209ee35821b2da0e984925bdb330 306 SUPERFAMILY SSF48452 193 302 3.61E-13 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS11435 aa93209ee35821b2da0e984925bdb330 306 Pfam PF13174 Tetratricopeptide repeat 262 292 0.0067 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMGD1_RS11435 aa93209ee35821b2da0e984925bdb330 306 SMART SM00028 222 255 0.0069 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMGD1_RS11435 aa93209ee35821b2da0e984925bdb330 306 Pfam PF07719 Tetratricopeptide repeat 224 253 2.0E-6 T 22-04-2016 IPR013105 Tetratricopeptide repeat 2 SMGD1_RS11435 aa93209ee35821b2da0e984925bdb330 306 Gene3D G3DSA:1.25.40.10 192 302 1.3E-13 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS01825 2abb473b79602297295fc9acd1fef6f0 438 PANTHER PTHR24423 1 160 5.2E-39 T 22-04-2016 SMGD1_RS01825 2abb473b79602297295fc9acd1fef6f0 438 Gene3D G3DSA:3.40.50.2300 1 124 1.4E-35 T 22-04-2016 SMGD1_RS01825 2abb473b79602297295fc9acd1fef6f0 438 SMART SM00448 1 118 3.2E-32 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS01825 2abb473b79602297295fc9acd1fef6f0 438 SUPERFAMILY SSF52172 1 130 2.42E-35 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS01825 2abb473b79602297295fc9acd1fef6f0 438 Pfam PF00072 Response regulator receiver domain 3 118 1.6E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS01960 17cfd42e3ffac155ef9ca1c2b07bdc5f 573 Gene3D G3DSA:3.40.50.2300 13 135 3.0E-31 T 22-04-2016 SMGD1_RS01960 17cfd42e3ffac155ef9ca1c2b07bdc5f 573 SMART SM00052 333 573 2.1E-40 T 22-04-2016 IPR001633 EAL domain SMGD1_RS01960 17cfd42e3ffac155ef9ca1c2b07bdc5f 573 Pfam PF00990 Diguanylate cyclase, GGDEF domain 168 316 1.1E-14 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS01960 17cfd42e3ffac155ef9ca1c2b07bdc5f 573 PANTHER PTHR33121 325 573 1.2E-50 T 22-04-2016 SMGD1_RS01960 17cfd42e3ffac155ef9ca1c2b07bdc5f 573 Gene3D G3DSA:3.30.70.270 168 323 3.3E-18 T 22-04-2016 SMGD1_RS01960 17cfd42e3ffac155ef9ca1c2b07bdc5f 573 SMART SM00448 14 125 1.3E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS01960 17cfd42e3ffac155ef9ca1c2b07bdc5f 573 SUPERFAMILY SSF141868 340 570 4.45E-58 T 22-04-2016 IPR001633 EAL domain SMGD1_RS01960 17cfd42e3ffac155ef9ca1c2b07bdc5f 573 SMART SM00267 156 321 4.8E-8 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS01960 17cfd42e3ffac155ef9ca1c2b07bdc5f 573 SUPERFAMILY SSF55073 172 320 4.55E-18 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS01960 17cfd42e3ffac155ef9ca1c2b07bdc5f 573 Pfam PF00072 Response regulator receiver domain 16 125 2.2E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS01960 17cfd42e3ffac155ef9ca1c2b07bdc5f 573 Pfam PF00563 EAL domain 341 569 2.8E-51 T 22-04-2016 IPR001633 EAL domain SMGD1_RS01960 17cfd42e3ffac155ef9ca1c2b07bdc5f 573 Gene3D G3DSA:3.20.20.450 336 571 6.1E-58 T 22-04-2016 IPR001633 EAL domain SMGD1_RS01960 17cfd42e3ffac155ef9ca1c2b07bdc5f 573 SUPERFAMILY SSF52172 12 144 2.7E-31 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS01960 17cfd42e3ffac155ef9ca1c2b07bdc5f 573 PANTHER PTHR33121:SF10 325 573 1.2E-50 T 22-04-2016 SMGD1_RS13975 33e8d0c068073e5fdf27b6281a153d34 394 SUPERFAMILY SSF102114 92 334 1.57E-45 T 22-04-2016 SMGD1_RS13975 33e8d0c068073e5fdf27b6281a153d34 394 PANTHER PTHR11918 1 386 1.1E-78 T 22-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein SMGD1_RS13975 33e8d0c068073e5fdf27b6281a153d34 394 Pfam PF00919 Uncharacterized protein family UPF0004 6 74 4.9E-13 T 22-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 SMGD1_RS13975 33e8d0c068073e5fdf27b6281a153d34 394 Pfam PF04055 Radical SAM superfamily 118 279 8.0E-21 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SMGD1_RS13975 33e8d0c068073e5fdf27b6281a153d34 394 SMART SM00729 113 326 2.1E-38 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 SMGD1_RS13975 33e8d0c068073e5fdf27b6281a153d34 394 Gene3D G3DSA:3.80.30.20 113 336 9.0E-57 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe SMGD1_RS13975 33e8d0c068073e5fdf27b6281a153d34 394 PANTHER PTHR11918:SF45 1 386 1.1E-78 T 22-04-2016 SMGD1_RS13975 33e8d0c068073e5fdf27b6281a153d34 394 TIGRFAM TIGR01579 MiaB-like-C: MiaB-like tRNA modifying enzyme 5 380 6.2E-110 T 22-04-2016 IPR006467 MiaB-like tRNA modifying enzyme GO:0016740 SMGD1_RS13975 33e8d0c068073e5fdf27b6281a153d34 394 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 6 387 1.3E-95 T 22-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 SMGD1_RS13975 33e8d0c068073e5fdf27b6281a153d34 394 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 117 137 - T 22-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 SMGD1_RS09520 6f9d00e3142de414a11b354d56910308 446 Gene3D G3DSA:1.20.120.430 121 181 3.9E-45 T 22-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 SMGD1_RS09520 6f9d00e3142de414a11b354d56910308 446 Gene3D G3DSA:1.20.120.430 388 446 3.9E-45 T 22-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 SMGD1_RS09520 6f9d00e3142de414a11b354d56910308 446 Gene3D G3DSA:1.20.120.430 247 270 3.9E-45 T 22-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 SMGD1_RS09520 6f9d00e3142de414a11b354d56910308 446 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 213 371 1.2E-28 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SMGD1_RS09520 6f9d00e3142de414a11b354d56910308 446 Pfam PF12631 MnmE helical domain 122 443 6.8E-41 T 22-04-2016 IPR025867 MnmE, helical domain SMGD1_RS09520 6f9d00e3142de414a11b354d56910308 446 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 4 446 31.169 T 22-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 SMGD1_RS09520 6f9d00e3142de414a11b354d56910308 446 PANTHER PTHR11649:SF56 8 446 1.3E-127 T 22-04-2016 SMGD1_RS09520 6f9d00e3142de414a11b354d56910308 446 Pfam PF01926 50S ribosome-binding GTPase 217 334 3.7E-25 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SMGD1_RS09520 6f9d00e3142de414a11b354d56910308 446 Gene3D G3DSA:3.40.50.300 210 246 3.5E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS09520 6f9d00e3142de414a11b354d56910308 446 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 218 238 2.2E-5 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SMGD1_RS09520 6f9d00e3142de414a11b354d56910308 446 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 285 303 2.2E-5 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SMGD1_RS09520 6f9d00e3142de414a11b354d56910308 446 Gene3D G3DSA:3.40.50.300 285 387 1.3E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS09520 6f9d00e3142de414a11b354d56910308 446 PANTHER PTHR11649 8 446 1.3E-127 T 22-04-2016 SMGD1_RS09520 6f9d00e3142de414a11b354d56910308 446 Gene3D G3DSA:3.30.1360.120 2 120 1.6E-44 T 22-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 SMGD1_RS09520 6f9d00e3142de414a11b354d56910308 446 SUPERFAMILY SSF116878 120 219 1.24E-38 T 22-04-2016 SMGD1_RS09520 6f9d00e3142de414a11b354d56910308 446 SUPERFAMILY SSF116878 372 446 1.24E-38 T 22-04-2016 SMGD1_RS09520 6f9d00e3142de414a11b354d56910308 446 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 10 446 8.1E-126 T 22-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 SMGD1_RS09520 6f9d00e3142de414a11b354d56910308 446 SUPERFAMILY SSF52540 203 351 2.5E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS09520 6f9d00e3142de414a11b354d56910308 446 SUPERFAMILY SSF52540 72 162 2.5E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS09520 6f9d00e3142de414a11b354d56910308 446 Pfam PF10396 GTP-binding protein TrmE N-terminus 5 119 5.5E-38 T 22-04-2016 IPR018948 GTP-binding protein TrmE, N-terminal SMGD1_RS09590 c1b9f966c2a50045ca005f245c8871e5 103 PANTHER PTHR13799 2 101 1.4E-33 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 SMGD1_RS09590 c1b9f966c2a50045ca005f245c8871e5 103 SUPERFAMILY SSF102705 2 101 1.06E-23 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 SMGD1_RS09590 c1b9f966c2a50045ca005f245c8871e5 103 Gene3D G3DSA:3.30.70.830 1 102 5.5E-41 T 22-04-2016 SMGD1_RS09590 c1b9f966c2a50045ca005f245c8871e5 103 PANTHER PTHR13799:SF18 2 101 1.4E-33 T 22-04-2016 SMGD1_RS12130 7a6aab63da5f2d9f79554bdf18548316 572 SUPERFAMILY SSF52172 13 160 5.83E-36 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS12130 7a6aab63da5f2d9f79554bdf18548316 572 PANTHER PTHR33121:SF10 243 264 2.9E-44 T 22-04-2016 SMGD1_RS12130 7a6aab63da5f2d9f79554bdf18548316 572 PANTHER PTHR33121:SF10 287 567 2.9E-44 T 22-04-2016 SMGD1_RS12130 7a6aab63da5f2d9f79554bdf18548316 572 Pfam PF00563 EAL domain 338 566 6.8E-53 T 22-04-2016 IPR001633 EAL domain SMGD1_RS12130 7a6aab63da5f2d9f79554bdf18548316 572 PANTHER PTHR33121 243 264 2.9E-44 T 22-04-2016 SMGD1_RS12130 7a6aab63da5f2d9f79554bdf18548316 572 PANTHER PTHR33121 287 567 2.9E-44 T 22-04-2016 SMGD1_RS12130 7a6aab63da5f2d9f79554bdf18548316 572 Pfam PF00072 Response regulator receiver domain 17 124 7.9E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS12130 7a6aab63da5f2d9f79554bdf18548316 572 SUPERFAMILY SSF55073 173 313 9.42E-15 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS12130 7a6aab63da5f2d9f79554bdf18548316 572 Pfam PF00990 Diguanylate cyclase, GGDEF domain 169 312 7.1E-15 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS12130 7a6aab63da5f2d9f79554bdf18548316 572 Gene3D G3DSA:3.20.20.450 335 568 9.0E-59 T 22-04-2016 IPR001633 EAL domain SMGD1_RS12130 7a6aab63da5f2d9f79554bdf18548316 572 Gene3D G3DSA:3.30.70.270 169 325 2.0E-16 T 22-04-2016 SMGD1_RS12130 7a6aab63da5f2d9f79554bdf18548316 572 SUPERFAMILY SSF141868 337 567 9.02E-60 T 22-04-2016 IPR001633 EAL domain SMGD1_RS12130 7a6aab63da5f2d9f79554bdf18548316 572 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 164 312 7.4E-12 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS12130 7a6aab63da5f2d9f79554bdf18548316 572 Gene3D G3DSA:3.40.50.2300 13 150 1.3E-34 T 22-04-2016 SMGD1_RS12130 7a6aab63da5f2d9f79554bdf18548316 572 SMART SM00052 331 572 5.6E-46 T 22-04-2016 IPR001633 EAL domain SMGD1_RS12130 7a6aab63da5f2d9f79554bdf18548316 572 SMART SM00448 15 126 1.4E-30 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS12130 7a6aab63da5f2d9f79554bdf18548316 572 SMART SM00267 157 319 6.3E-7 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS02215 21028d70e7ce68159989ff0392ece4da 149 SUPERFAMILY SSF54637 2 146 6.83E-46 T 22-04-2016 IPR029069 HotDog domain SMGD1_RS02215 21028d70e7ce68159989ff0392ece4da 149 PANTHER PTHR30272 2 149 9.4E-63 T 22-04-2016 SMGD1_RS02215 21028d70e7ce68159989ff0392ece4da 149 Gene3D G3DSA:3.10.129.10 2 148 1.4E-53 T 22-04-2016 IPR029069 HotDog domain SMGD1_RS02215 21028d70e7ce68159989ff0392ece4da 149 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 3 148 33.412 T 22-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 SMGD1_RS02215 21028d70e7ce68159989ff0392ece4da 149 Pfam PF07977 FabA-like domain 12 140 7.4E-36 T 22-04-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 SMGD1_RS02215 21028d70e7ce68159989ff0392ece4da 149 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 3 146 3.2E-54 T 22-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 SMGD1_RS02205 1e87ae56b25ccdf800a0a12d1a40b800 167 Gene3D G3DSA:2.40.100.10 21 156 1.0E-48 T 22-04-2016 IPR029000 Cyclophilin-like domain SMGD1_RS02205 1e87ae56b25ccdf800a0a12d1a40b800 167 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 117 129 2.1E-25 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SMGD1_RS02205 1e87ae56b25ccdf800a0a12d1a40b800 167 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 130 145 2.1E-25 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SMGD1_RS02205 1e87ae56b25ccdf800a0a12d1a40b800 167 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 102 117 2.1E-25 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SMGD1_RS02205 1e87ae56b25ccdf800a0a12d1a40b800 167 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 36 51 2.1E-25 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SMGD1_RS02205 1e87ae56b25ccdf800a0a12d1a40b800 167 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 62 74 2.1E-25 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SMGD1_RS02205 1e87ae56b25ccdf800a0a12d1a40b800 167 SUPERFAMILY SSF50891 23 159 6.14E-48 T 22-04-2016 IPR029000 Cyclophilin-like domain SMGD1_RS02205 1e87ae56b25ccdf800a0a12d1a40b800 167 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 57 74 - T 22-04-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 SMGD1_RS02205 1e87ae56b25ccdf800a0a12d1a40b800 167 PIRSF PIRSF001467 7 166 2.6E-39 T 22-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 SMGD1_RS02205 1e87ae56b25ccdf800a0a12d1a40b800 167 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 24 155 5.8E-41 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SMGD1_RS02205 1e87ae56b25ccdf800a0a12d1a40b800 167 PANTHER PTHR11071 26 166 4.2E-46 T 22-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 SMGD1_RS14295 97db56e51fc7ec8fbf357f25181a834c 670 PIRSF PIRSF005091 3 667 6.5E-68 T 22-04-2016 IPR012160 Lipoteichoic acid synthase-like KEGG: 00440+2.7.8.-|KEGG: 00513+2.7.8.-|KEGG: 00540+2.7.8.-|KEGG: 00564+2.7.8.-|KEGG: 00600+2.7.8.-|KEGG: 00770+2.7.8.-|UniPathway: UPA00556 SMGD1_RS14295 97db56e51fc7ec8fbf357f25181a834c 670 PANTHER PTHR10342:SF236 278 629 7.3E-38 T 22-04-2016 SMGD1_RS14295 97db56e51fc7ec8fbf357f25181a834c 670 SUPERFAMILY SSF53649 280 661 1.27E-47 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 SMGD1_RS14295 97db56e51fc7ec8fbf357f25181a834c 670 Gene3D G3DSA:3.40.720.10 281 578 1.3E-38 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 SMGD1_RS14295 97db56e51fc7ec8fbf357f25181a834c 670 PANTHER PTHR10342 278 629 7.3E-38 T 22-04-2016 SMGD1_RS14295 97db56e51fc7ec8fbf357f25181a834c 670 Pfam PF00884 Sulfatase 281 570 3.0E-37 T 22-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 SMGD1_RS00745 a4176164a62f538ec7adfda01f9f9977 319 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 3 297 34.513 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SMGD1_RS00745 a4176164a62f538ec7adfda01f9f9977 319 PANTHER PTHR11557 1 316 5.2E-124 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SMGD1_RS00745 a4176164a62f538ec7adfda01f9f9977 319 SUPERFAMILY SSF54782 221 305 4.84E-20 T 22-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SMGD1_RS00745 a4176164a62f538ec7adfda01f9f9977 319 PRINTS PR00151 Porphobilinogen deaminase signature 141 158 2.8E-44 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SMGD1_RS00745 a4176164a62f538ec7adfda01f9f9977 319 PRINTS PR00151 Porphobilinogen deaminase signature 230 247 2.8E-44 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SMGD1_RS00745 a4176164a62f538ec7adfda01f9f9977 319 PRINTS PR00151 Porphobilinogen deaminase signature 74 93 2.8E-44 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SMGD1_RS00745 a4176164a62f538ec7adfda01f9f9977 319 PRINTS PR00151 Porphobilinogen deaminase signature 122 139 2.8E-44 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SMGD1_RS00745 a4176164a62f538ec7adfda01f9f9977 319 PRINTS PR00151 Porphobilinogen deaminase signature 43 63 2.8E-44 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SMGD1_RS00745 a4176164a62f538ec7adfda01f9f9977 319 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 231 247 - T 22-04-2016 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SMGD1_RS00745 a4176164a62f538ec7adfda01f9f9977 319 PIRSF PIRSF001438 1 312 9.2E-104 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SMGD1_RS00745 a4176164a62f538ec7adfda01f9f9977 319 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 4 297 4.7E-99 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SMGD1_RS00745 a4176164a62f538ec7adfda01f9f9977 319 Gene3D G3DSA:3.30.160.40 222 305 6.4E-19 T 22-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SMGD1_RS00745 a4176164a62f538ec7adfda01f9f9977 319 SUPERFAMILY SSF53850 2 217 3.88E-73 T 22-04-2016 SMGD1_RS00745 a4176164a62f538ec7adfda01f9f9977 319 Gene3D G3DSA:3.40.190.10 109 198 6.4E-35 T 22-04-2016 SMGD1_RS00745 a4176164a62f538ec7adfda01f9f9977 319 Gene3D G3DSA:3.40.190.10 2 108 5.4E-43 T 22-04-2016 SMGD1_RS00745 a4176164a62f538ec7adfda01f9f9977 319 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 4 212 6.5E-69 T 22-04-2016 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SMGD1_RS00745 a4176164a62f538ec7adfda01f9f9977 319 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 226 295 2.8E-13 T 22-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SMGD1_RS12395 1d8de1a5b4874a4313c5ff0e292c2555 107 Gene3D G3DSA:3.30.70.930 1 99 2.2E-21 T 22-04-2016 IPR029756 MTH1187/YkoF-like SMGD1_RS12395 1d8de1a5b4874a4313c5ff0e292c2555 107 PANTHER PTHR33777:SF1 1 107 1.6E-20 T 22-04-2016 SMGD1_RS12395 1d8de1a5b4874a4313c5ff0e292c2555 107 TIGRFAM TIGR00106 TIGR00106: uncharacterized protein, MTH1187 family 18 100 9.8E-16 T 22-04-2016 IPR002767 Thiamine-binding protein SMGD1_RS12395 1d8de1a5b4874a4313c5ff0e292c2555 107 SUPERFAMILY SSF89957 3 101 2.49E-20 T 22-04-2016 IPR029756 MTH1187/YkoF-like SMGD1_RS12395 1d8de1a5b4874a4313c5ff0e292c2555 107 Pfam PF01910 Thiamine-binding protein 6 98 3.6E-19 T 22-04-2016 IPR002767 Thiamine-binding protein SMGD1_RS12395 1d8de1a5b4874a4313c5ff0e292c2555 107 PANTHER PTHR33777 1 107 1.6E-20 T 22-04-2016 SMGD1_RS06015 fbf98bd8a25564c0ac3b856dd44fd48f 247 Gene3D G3DSA:3.10.310.10 131 223 9.0E-22 T 22-04-2016 SMGD1_RS06015 fbf98bd8a25564c0ac3b856dd44fd48f 247 Gene3D G3DSA:3.10.310.10 2 130 8.2E-36 T 22-04-2016 SMGD1_RS06015 fbf98bd8a25564c0ac3b856dd44fd48f 247 Pfam PF01678 Diaminopimelate epimerase 132 220 3.3E-10 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 SMGD1_RS06015 fbf98bd8a25564c0ac3b856dd44fd48f 247 Pfam PF01678 Diaminopimelate epimerase 4 107 3.1E-24 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 SMGD1_RS06015 fbf98bd8a25564c0ac3b856dd44fd48f 247 SUPERFAMILY SSF54506 3 122 1.96E-30 T 22-04-2016 SMGD1_RS06015 fbf98bd8a25564c0ac3b856dd44fd48f 247 SUPERFAMILY SSF54506 128 243 1.06E-22 T 22-04-2016 SMGD1_RS06015 fbf98bd8a25564c0ac3b856dd44fd48f 247 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 1 244 7.9E-57 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 SMGD1_RS06015 fbf98bd8a25564c0ac3b856dd44fd48f 247 PANTHER PTHR31689 1 220 6.6E-53 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 SMGD1_RS06015 fbf98bd8a25564c0ac3b856dd44fd48f 247 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 60 74 - T 22-04-2016 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 SMGD1_RS13515 feca1b794e6dc03fd3e0fde7a2df222b 152 Gene3D G3DSA:3.40.630.30 2 138 7.6E-27 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMGD1_RS13515 feca1b794e6dc03fd3e0fde7a2df222b 152 SUPERFAMILY SSF55729 36 151 1.28E-17 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMGD1_RS13515 feca1b794e6dc03fd3e0fde7a2df222b 152 Pfam PF00583 Acetyltransferase (GNAT) family 48 117 3.7E-10 T 22-04-2016 IPR000182 GNAT domain GO:0008080 SMGD1_RS13515 feca1b794e6dc03fd3e0fde7a2df222b 152 PANTHER PTHR30602:SF4 6 129 1.3E-15 T 22-04-2016 SMGD1_RS13515 feca1b794e6dc03fd3e0fde7a2df222b 152 PANTHER PTHR30602 6 129 1.3E-15 T 22-04-2016 SMGD1_RS14345 ee539a4a489f3a259fbd4b22b7ac5713 697 SUPERFAMILY SSF56935 19 697 3.66E-104 T 22-04-2016 SMGD1_RS14345 ee539a4a489f3a259fbd4b22b7ac5713 697 Gene3D G3DSA:2.40.170.20 148 697 2.0E-72 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMGD1_RS14345 ee539a4a489f3a259fbd4b22b7ac5713 697 Pfam PF00593 TonB dependent receptor 457 671 6.8E-26 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMGD1_RS14345 ee539a4a489f3a259fbd4b22b7ac5713 697 PANTHER PTHR32552 11 370 3.2E-55 T 22-04-2016 SMGD1_RS14345 ee539a4a489f3a259fbd4b22b7ac5713 697 PANTHER PTHR32552 390 697 3.2E-55 T 22-04-2016 SMGD1_RS14345 ee539a4a489f3a259fbd4b22b7ac5713 697 Pfam PF07715 TonB-dependent Receptor Plug Domain 37 146 3.6E-17 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMGD1_RS14345 ee539a4a489f3a259fbd4b22b7ac5713 697 Gene3D G3DSA:2.170.130.10 17 147 3.0E-27 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMGD1_RS05200 cb4df6162b7c2191991ebe272481aad3 346 Gene3D G3DSA:3.90.1210.10 289 344 2.1E-22 T 22-04-2016 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal SMGD1_RS05200 cb4df6162b7c2191991ebe272481aad3 346 SMART SM00858 286 345 7.2E-9 T 22-04-2016 IPR013974 SAF domain SMGD1_RS05200 cb4df6162b7c2191991ebe272481aad3 346 SUPERFAMILY SSF51269 278 344 3.14E-18 T 22-04-2016 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal SMGD1_RS05200 cb4df6162b7c2191991ebe272481aad3 346 PANTHER PTHR23416 4 296 1.4E-68 T 22-04-2016 SMGD1_RS05200 cb4df6162b7c2191991ebe272481aad3 346 Gene3D G3DSA:3.20.20.70 4 271 7.0E-87 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMGD1_RS05200 cb4df6162b7c2191991ebe272481aad3 346 Pfam PF08666 SAF domain 289 344 1.0E-10 T 22-04-2016 IPR013974 SAF domain SMGD1_RS05200 cb4df6162b7c2191991ebe272481aad3 346 SUPERFAMILY SSF51569 3 285 5.98E-78 T 22-04-2016 SMGD1_RS05200 cb4df6162b7c2191991ebe272481aad3 346 Pfam PF03102 NeuB family 37 271 1.2E-67 T 22-04-2016 IPR013132 N-acetylneuraminic acid synthase, N-terminal GO:0016051 SMGD1_RS05200 cb4df6162b7c2191991ebe272481aad3 346 PANTHER PTHR23416:SF62 4 296 1.4E-68 T 22-04-2016 SMGD1_RS11260 f94d4e65824174cc88b855a31dc5f942 733 ProSitePatterns PS00150 Acylphosphatase signature 1. 13 23 - T 22-04-2016 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 SMGD1_RS11260 f94d4e65824174cc88b855a31dc5f942 733 Pfam PF00708 Acylphosphatase 6 93 2.7E-22 T 22-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 SMGD1_RS11260 f94d4e65824174cc88b855a31dc5f942 733 PANTHER PTHR10029:SF4 7 733 2.1E-291 T 22-04-2016 SMGD1_RS11260 f94d4e65824174cc88b855a31dc5f942 733 TIGRFAM TIGR00143 hypF: carbamoyltransferase HypF 12 725 5.3E-220 T 22-04-2016 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 UniPathway: UPA00335 SMGD1_RS11260 f94d4e65824174cc88b855a31dc5f942 733 SUPERFAMILY SSF55821 184 391 1.13E-45 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain SMGD1_RS11260 f94d4e65824174cc88b855a31dc5f942 733 PANTHER PTHR10029 7 733 2.1E-291 T 22-04-2016 SMGD1_RS11260 f94d4e65824174cc88b855a31dc5f942 733 SUPERFAMILY SSF54975 7 94 4.8E-20 T 22-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 SMGD1_RS11260 f94d4e65824174cc88b855a31dc5f942 733 Gene3D G3DSA:3.30.70.100 7 93 4.5E-23 T 22-04-2016 SMGD1_RS11260 f94d4e65824174cc88b855a31dc5f942 733 PIRSF PIRSF006256 4 733 4.3E-247 T 22-04-2016 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 UniPathway: UPA00335 SMGD1_RS11260 f94d4e65824174cc88b855a31dc5f942 733 Pfam PF01300 Telomere recombination 206 380 4.8E-52 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 SMGD1_RS11260 f94d4e65824174cc88b855a31dc5f942 733 Gene3D G3DSA:3.90.870.10 198 375 1.5E-46 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain SMGD1_RS11260 f94d4e65824174cc88b855a31dc5f942 733 Pfam PF07503 HypF finger 166 197 6.5E-16 T 22-04-2016 IPR011125 Zinc finger, HypF-type GO:0008270 UniPathway: UPA00335 SMGD1_RS11260 f94d4e65824174cc88b855a31dc5f942 733 Pfam PF07503 HypF finger 115 149 1.2E-7 T 22-04-2016 IPR011125 Zinc finger, HypF-type GO:0008270 UniPathway: UPA00335 SMGD1_RS01590 31518bdd9f2fc3702f2fd6aa9299b8eb 565 PANTHER PTHR10799 170 369 3.6E-26 T 22-04-2016 SMGD1_RS01590 31518bdd9f2fc3702f2fd6aa9299b8eb 565 PANTHER PTHR10799 434 561 3.6E-26 T 22-04-2016 SMGD1_RS01590 31518bdd9f2fc3702f2fd6aa9299b8eb 565 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 400 562 1.9E-54 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS01590 31518bdd9f2fc3702f2fd6aa9299b8eb 565 Gene3D G3DSA:3.30.70.270 403 562 3.4E-50 T 22-04-2016 SMGD1_RS01590 31518bdd9f2fc3702f2fd6aa9299b8eb 565 Pfam PF07696 7TMR-DISM extracellular 2 34 150 6.9E-18 T 22-04-2016 IPR011622 7TM-DISM receptor, extracellular domain, type 2 SMGD1_RS01590 31518bdd9f2fc3702f2fd6aa9299b8eb 565 PANTHER PTHR10799:SF728 170 369 3.6E-26 T 22-04-2016 SMGD1_RS01590 31518bdd9f2fc3702f2fd6aa9299b8eb 565 PANTHER PTHR10799:SF728 434 561 3.6E-26 T 22-04-2016 SMGD1_RS01590 31518bdd9f2fc3702f2fd6aa9299b8eb 565 Pfam PF07695 7TM diverse intracellular signalling 179 371 5.3E-22 T 22-04-2016 IPR011623 7TM-DISM receptor, extracellular domain, type 1 SMGD1_RS01590 31518bdd9f2fc3702f2fd6aa9299b8eb 565 SMART SM00267 390 564 3.1E-52 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS01590 31518bdd9f2fc3702f2fd6aa9299b8eb 565 SUPERFAMILY SSF55073 406 562 5.57E-47 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS01590 31518bdd9f2fc3702f2fd6aa9299b8eb 565 Pfam PF00990 Diguanylate cyclase, GGDEF domain 401 560 1.6E-46 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS00510 b6954ceeddfb7d9ba9b1b31612e53398 248 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 16 243 1.6E-29 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SMGD1_RS00510 b6954ceeddfb7d9ba9b1b31612e53398 248 PANTHER PTHR30469 6 248 2.5E-43 T 22-04-2016 SMGD1_RS00510 b6954ceeddfb7d9ba9b1b31612e53398 248 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 8 247 1.6E-36 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 SMGD1_RS00510 b6954ceeddfb7d9ba9b1b31612e53398 248 Gene3D G3DSA:2.40.50.100 31 63 1.5E-13 T 22-04-2016 SMGD1_RS00510 b6954ceeddfb7d9ba9b1b31612e53398 248 Gene3D G3DSA:2.40.50.100 138 169 1.5E-13 T 22-04-2016 SMGD1_RS00510 b6954ceeddfb7d9ba9b1b31612e53398 248 SUPERFAMILY SSF111369 21 247 9.68E-19 T 22-04-2016 SMGD1_RS00510 b6954ceeddfb7d9ba9b1b31612e53398 248 PANTHER PTHR30469:SF15 6 248 2.5E-43 T 22-04-2016 SMGD1_RS08300 bd47d2807de84b0b6024d677f21d4006 259 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 195 258 6.9E-18 T 22-04-2016 IPR004606 Molybdenum-pterin binding GO:0006810|GO:0030151 SMGD1_RS08300 bd47d2807de84b0b6024d677f21d4006 259 Gene3D G3DSA:2.40.50.100 125 189 5.5E-14 T 22-04-2016 SMGD1_RS08300 bd47d2807de84b0b6024d677f21d4006 259 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 21 82 2.7E-11 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMGD1_RS08300 bd47d2807de84b0b6024d677f21d4006 259 Gene3D G3DSA:1.10.10.10 2 124 1.5E-42 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMGD1_RS08300 bd47d2807de84b0b6024d677f21d4006 259 Pfam PF03459 TOBE domain 196 256 7.9E-12 T 22-04-2016 IPR005116 Transport-associated OB, type 1 SMGD1_RS08300 bd47d2807de84b0b6024d677f21d4006 259 Pfam PF03459 TOBE domain 124 187 1.2E-6 T 22-04-2016 IPR005116 Transport-associated OB, type 1 SMGD1_RS08300 bd47d2807de84b0b6024d677f21d4006 259 Gene3D G3DSA:2.40.50.100 194 257 5.0E-19 T 22-04-2016 SMGD1_RS08300 bd47d2807de84b0b6024d677f21d4006 259 SUPERFAMILY SSF50331 168 257 1.06E-16 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal SMGD1_RS08300 bd47d2807de84b0b6024d677f21d4006 259 PIRSF PIRSF005763 1 259 7.7E-74 T 22-04-2016 IPR016462 Molybdate-dependent transcriptional regulator ModE GO:0006355|GO:0015689|GO:0030151 SMGD1_RS08300 bd47d2807de84b0b6024d677f21d4006 259 SUPERFAMILY SSF46785 2 102 7.48E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMGD1_RS08300 bd47d2807de84b0b6024d677f21d4006 259 PANTHER PTHR30432 1 259 1.9E-38 T 22-04-2016 SMGD1_RS08300 bd47d2807de84b0b6024d677f21d4006 259 SUPERFAMILY SSF50331 122 189 1.48E-10 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal SMGD1_RS00960 661cd93714ad07edfdf4372382af6adc 175 Gene3D G3DSA:3.30.420.10 2 170 8.8E-31 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMGD1_RS00960 661cd93714ad07edfdf4372382af6adc 175 SUPERFAMILY SSF53098 2 172 9.02E-24 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMGD1_RS00960 661cd93714ad07edfdf4372382af6adc 175 Pfam PF00929 Exonuclease 2 167 2.7E-11 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III SMGD1_RS00960 661cd93714ad07edfdf4372382af6adc 175 SMART SM00479 1 175 3.3E-4 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III SMGD1_RS13540 612300dbb4241fa70b07b4a0fa5b88b8 190 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 153 165 - T 22-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 SMGD1_RS13540 612300dbb4241fa70b07b4a0fa5b88b8 190 PANTHER PTHR23133 5 190 4.8E-80 T 22-04-2016 SMGD1_RS13540 612300dbb4241fa70b07b4a0fa5b88b8 190 Gene3D G3DSA:3.30.230.40 88 190 1.0E-27 T 22-04-2016 SMGD1_RS13540 612300dbb4241fa70b07b4a0fa5b88b8 190 PANTHER PTHR23133:SF2 5 190 4.8E-80 T 22-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 SMGD1_RS13540 612300dbb4241fa70b07b4a0fa5b88b8 190 SUPERFAMILY SSF54211 86 175 6.07E-29 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SMGD1_RS13540 612300dbb4241fa70b07b4a0fa5b88b8 190 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 59 72 - T 22-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 SMGD1_RS13540 612300dbb4241fa70b07b4a0fa5b88b8 190 Gene3D G3DSA:3.30.230.40 3 86 3.2E-32 T 22-04-2016 SMGD1_RS13540 612300dbb4241fa70b07b4a0fa5b88b8 190 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 29 171 3.7E-56 T 22-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 SMGD1_RS13540 612300dbb4241fa70b07b4a0fa5b88b8 190 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 1 190 35.041 T 22-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 SMGD1_RS13540 612300dbb4241fa70b07b4a0fa5b88b8 190 SUPERFAMILY SSF54211 3 80 1.16E-28 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SMGD1_RS02905 04aafaa2c154793b64afb2817fc3b9af 939 TIGRFAM TIGR01706 NAPA: periplasmic nitrate reductase, large subunit 3 939 0.0 T 22-04-2016 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042128|GO:0042597|GO:0051539|GO:0055114 KEGG: 00910+1.7.99.4 SMGD1_RS02905 04aafaa2c154793b64afb2817fc3b9af 939 Gene3D G3DSA:3.40.50.740 451 626 3.0E-69 T 22-04-2016 SMGD1_RS02905 04aafaa2c154793b64afb2817fc3b9af 939 Gene3D G3DSA:3.40.50.740 706 749 3.0E-69 T 22-04-2016 SMGD1_RS02905 04aafaa2c154793b64afb2817fc3b9af 939 Gene3D G3DSA:3.40.50.740 97 180 3.0E-69 T 22-04-2016 SMGD1_RS02905 04aafaa2c154793b64afb2817fc3b9af 939 PANTHER PTHR11615 396 663 1.7E-292 T 22-04-2016 SMGD1_RS02905 04aafaa2c154793b64afb2817fc3b9af 939 PANTHER PTHR11615 41 291 1.7E-292 T 22-04-2016 SMGD1_RS02905 04aafaa2c154793b64afb2817fc3b9af 939 PANTHER PTHR11615 728 939 1.7E-292 T 22-04-2016 SMGD1_RS02905 04aafaa2c154793b64afb2817fc3b9af 939 Gene3D G3DSA:2.40.40.20 815 939 7.3E-43 T 22-04-2016 SMGD1_RS02905 04aafaa2c154793b64afb2817fc3b9af 939 Pfam PF00384 Molybdopterin oxidoreductase 97 619 1.1E-66 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 SMGD1_RS02905 04aafaa2c154793b64afb2817fc3b9af 939 PANTHER PTHR11615:SF123 396 663 1.7E-292 T 22-04-2016 SMGD1_RS02905 04aafaa2c154793b64afb2817fc3b9af 939 PANTHER PTHR11615:SF123 41 291 1.7E-292 T 22-04-2016 SMGD1_RS02905 04aafaa2c154793b64afb2817fc3b9af 939 PANTHER PTHR11615:SF123 728 939 1.7E-292 T 22-04-2016 SMGD1_RS02905 04aafaa2c154793b64afb2817fc3b9af 939 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 45 62 - T 22-04-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 SMGD1_RS02905 04aafaa2c154793b64afb2817fc3b9af 939 Gene3D G3DSA:3.40.228.10 181 296 1.9E-46 T 22-04-2016 SMGD1_RS02905 04aafaa2c154793b64afb2817fc3b9af 939 Gene3D G3DSA:3.40.228.10 369 450 1.9E-46 T 22-04-2016 SMGD1_RS02905 04aafaa2c154793b64afb2817fc3b9af 939 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 3 26 2.5E-6 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal SMGD1_RS02905 04aafaa2c154793b64afb2817fc3b9af 939 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 41 93 7.0E-18 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 SMGD1_RS02905 04aafaa2c154793b64afb2817fc3b9af 939 Gene3D G3DSA:2.20.25.90 39 95 1.3E-20 T 22-04-2016 SMGD1_RS02905 04aafaa2c154793b64afb2817fc3b9af 939 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 22 1.2E-4 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal SMGD1_RS02905 04aafaa2c154793b64afb2817fc3b9af 939 SUPERFAMILY SSF53706 39 626 1.57E-157 T 22-04-2016 SMGD1_RS02905 04aafaa2c154793b64afb2817fc3b9af 939 Pfam PF01568 Molydopterin dinucleotide binding domain 826 933 3.4E-23 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 SMGD1_RS02905 04aafaa2c154793b64afb2817fc3b9af 939 SMART SM00926 40 94 2.6E-14 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 SMGD1_RS02905 04aafaa2c154793b64afb2817fc3b9af 939 SUPERFAMILY SSF50692 804 939 8.7E-40 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain SMGD1_RS11570 90bbb535cf3ac85494bde68353af27d6 412 TIGRFAM TIGR00032 argG: argininosuccinate synthase 7 404 2.0E-142 T 22-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SMGD1_RS11570 90bbb535cf3ac85494bde68353af27d6 412 Hamap MF_00005 Argininosuccinate synthase [argG]. 5 410 51.835 T 22-04-2016 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SMGD1_RS11570 90bbb535cf3ac85494bde68353af27d6 412 SUPERFAMILY SSF69864 185 408 2.62E-93 T 22-04-2016 SMGD1_RS11570 90bbb535cf3ac85494bde68353af27d6 412 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 121 132 - T 22-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SMGD1_RS11570 90bbb535cf3ac85494bde68353af27d6 412 PANTHER PTHR11587:SF2 4 412 1.2E-221 T 22-04-2016 SMGD1_RS11570 90bbb535cf3ac85494bde68353af27d6 412 Pfam PF00764 Arginosuccinate synthase 9 402 9.9E-154 T 22-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SMGD1_RS11570 90bbb535cf3ac85494bde68353af27d6 412 Gene3D G3DSA:3.40.50.620 6 175 6.8E-65 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMGD1_RS11570 90bbb535cf3ac85494bde68353af27d6 412 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 11 19 - T 22-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SMGD1_RS11570 90bbb535cf3ac85494bde68353af27d6 412 Gene3D G3DSA:3.90.1260.10 187 410 4.1E-99 T 22-04-2016 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SMGD1_RS11570 90bbb535cf3ac85494bde68353af27d6 412 PANTHER PTHR11587 4 412 1.2E-221 T 22-04-2016 SMGD1_RS11570 90bbb535cf3ac85494bde68353af27d6 412 SUPERFAMILY SSF52402 6 170 5.07E-46 T 22-04-2016 SMGD1_RS09400 c3412b8586325512c648eee662d9b6cc 442 Gene3D G3DSA:2.40.100.10 278 440 7.1E-63 T 22-04-2016 IPR029000 Cyclophilin-like domain SMGD1_RS09400 c3412b8586325512c648eee662d9b6cc 442 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 384 396 2.6E-28 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SMGD1_RS09400 c3412b8586325512c648eee662d9b6cc 442 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 397 412 2.6E-28 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SMGD1_RS09400 c3412b8586325512c648eee662d9b6cc 442 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 369 384 2.6E-28 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SMGD1_RS09400 c3412b8586325512c648eee662d9b6cc 442 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 327 339 2.6E-28 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SMGD1_RS09400 c3412b8586325512c648eee662d9b6cc 442 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 301 316 2.6E-28 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SMGD1_RS09400 c3412b8586325512c648eee662d9b6cc 442 PANTHER PTHR22576:SF30 1 255 9.0E-81 T 22-04-2016 SMGD1_RS09400 c3412b8586325512c648eee662d9b6cc 442 PANTHER PTHR22576 1 255 9.0E-81 T 22-04-2016 SMGD1_RS09400 c3412b8586325512c648eee662d9b6cc 442 SMART SM00115 24 253 5.4E-5 T 22-04-2016 IPR015917 Peptidase C14A, caspase catalytic domain GO:0006915|GO:0008234 SMGD1_RS09400 c3412b8586325512c648eee662d9b6cc 442 SUPERFAMILY SSF50891 286 441 2.92E-57 T 22-04-2016 IPR029000 Cyclophilin-like domain SMGD1_RS09400 c3412b8586325512c648eee662d9b6cc 442 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 288 439 3.4E-46 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SMGD1_RS09400 c3412b8586325512c648eee662d9b6cc 442 Pfam PF00656 Caspase domain 33 251 1.9E-34 T 22-04-2016 SMGD1_RS09400 c3412b8586325512c648eee662d9b6cc 442 Gene3D G3DSA:3.40.50.1460 22 252 8.5E-24 T 22-04-2016 IPR029030 Caspase-like domain SMGD1_RS09400 c3412b8586325512c648eee662d9b6cc 442 SUPERFAMILY SSF52129 19 251 8.52E-53 T 22-04-2016 IPR029030 Caspase-like domain SMGD1_RS02325 e2f1714292a181aef4cd699493fcffbc 216 SUPERFAMILY SSF53335 38 199 3.14E-29 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS02325 e2f1714292a181aef4cd699493fcffbc 216 Gene3D G3DSA:3.40.50.150 40 194 4.1E-27 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS02325 e2f1714292a181aef4cd699493fcffbc 216 PANTHER PTHR10108:SF705 34 159 1.6E-14 T 22-04-2016 SMGD1_RS02325 e2f1714292a181aef4cd699493fcffbc 216 PANTHER PTHR10108 34 159 1.6E-14 T 22-04-2016 SMGD1_RS02325 e2f1714292a181aef4cd699493fcffbc 216 Pfam PF13489 Methyltransferase domain 42 189 9.6E-15 T 22-04-2016 SMGD1_RS02835 2917f2465e91484c552c13a97307aea5 72 Gene3D G3DSA:2.40.50.140 6 71 8.0E-28 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMGD1_RS02835 2917f2465e91484c552c13a97307aea5 72 PIRSF PIRSF002599 1 72 2.8E-23 T 22-04-2016 IPR012156 Cold shock, CspA GO:0003676 SMGD1_RS02835 2917f2465e91484c552c13a97307aea5 72 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 22-04-2016 IPR019844 Cold-shock conserved site SMGD1_RS02835 2917f2465e91484c552c13a97307aea5 72 Pfam PF00313 'Cold-shock' DNA-binding domain 6 71 2.6E-26 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SMGD1_RS02835 2917f2465e91484c552c13a97307aea5 72 SUPERFAMILY SSF50249 3 71 2.08E-22 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMGD1_RS02835 2917f2465e91484c552c13a97307aea5 72 PRINTS PR00050 Cold shock protein signature 7 22 1.7E-15 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SMGD1_RS02835 2917f2465e91484c552c13a97307aea5 72 PRINTS PR00050 Cold shock protein signature 28 37 1.7E-15 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SMGD1_RS02835 2917f2465e91484c552c13a97307aea5 72 PRINTS PR00050 Cold shock protein signature 45 63 1.7E-15 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SMGD1_RS02835 2917f2465e91484c552c13a97307aea5 72 SMART SM00357 6 72 4.4E-25 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 SMGD1_RS02835 2917f2465e91484c552c13a97307aea5 72 PANTHER PTHR11544 7 72 5.9E-26 T 22-04-2016 SMGD1_RS06380 0b743b5738ec34e5a343f26f9dea1275 387 SUPERFAMILY SSF55073 235 385 3.37E-36 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS06380 0b743b5738ec34e5a343f26f9dea1275 387 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 229 384 7.6E-37 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS06380 0b743b5738ec34e5a343f26f9dea1275 387 Gene3D G3DSA:3.30.70.270 232 384 3.9E-40 T 22-04-2016 SMGD1_RS06380 0b743b5738ec34e5a343f26f9dea1275 387 PANTHER PTHR10799 256 383 7.0E-15 T 22-04-2016 SMGD1_RS06380 0b743b5738ec34e5a343f26f9dea1275 387 SMART SM00267 220 387 1.7E-39 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS06380 0b743b5738ec34e5a343f26f9dea1275 387 Pfam PF00990 Diguanylate cyclase, GGDEF domain 230 383 4.7E-35 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS02350 ba334820c85cc704ebdc7109847369ff 307 SUPERFAMILY SSF53448 3 224 2.73E-34 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMGD1_RS02350 ba334820c85cc704ebdc7109847369ff 307 PANTHER PTHR10859 5 305 1.4E-78 T 22-04-2016 SMGD1_RS02350 ba334820c85cc704ebdc7109847369ff 307 PANTHER PTHR10859:SF49 5 305 1.4E-78 T 22-04-2016 SMGD1_RS02350 ba334820c85cc704ebdc7109847369ff 307 Gene3D G3DSA:3.90.550.10 3 168 1.6E-28 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMGD1_RS02350 ba334820c85cc704ebdc7109847369ff 307 Pfam PF00535 Glycosyl transferase family 2 8 138 4.6E-27 T 22-04-2016 IPR001173 Glycosyltransferase 2-like SMGD1_RS07985 765a4f613b636c9261e4d2d31e6abc94 223 SMART SM00382 31 217 4.8E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain SMGD1_RS07985 765a4f613b636c9261e4d2d31e6abc94 223 Gene3D G3DSA:3.40.50.300 1 221 1.2E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS07985 765a4f613b636c9261e4d2d31e6abc94 223 SUPERFAMILY SSF52540 1 222 8.65E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS07985 765a4f613b636c9261e4d2d31e6abc94 223 Pfam PF00005 ABC transporter 22 171 1.7E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMGD1_RS07985 765a4f613b636c9261e4d2d31e6abc94 223 PANTHER PTHR24220 3 221 9.1E-87 T 22-04-2016 SMGD1_RS07985 765a4f613b636c9261e4d2d31e6abc94 223 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMGD1_RS07985 765a4f613b636c9261e4d2d31e6abc94 223 PANTHER PTHR24220:SF342 3 221 9.1E-87 T 22-04-2016 SMGD1_RS11545 6ca2fec148ea28b8a8d5cc09194c798a 292 SUPERFAMILY SSF54814 178 291 3.07E-33 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 SMGD1_RS11545 6ca2fec148ea28b8a8d5cc09194c798a 292 Gene3D G3DSA:3.30.300.20 185 286 9.8E-33 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta SMGD1_RS11545 6ca2fec148ea28b8a8d5cc09194c798a 292 TIGRFAM TIGR00436 era: GTP-binding protein Era 5 272 4.3E-68 T 22-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 SMGD1_RS11545 6ca2fec148ea28b8a8d5cc09194c798a 292 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 126 7.8E-22 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SMGD1_RS11545 6ca2fec148ea28b8a8d5cc09194c798a 292 Gene3D G3DSA:3.40.50.300 5 169 2.7E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS11545 6ca2fec148ea28b8a8d5cc09194c798a 292 Pfam PF07650 KH domain 203 278 7.7E-16 T 22-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 SMGD1_RS11545 6ca2fec148ea28b8a8d5cc09194c798a 292 SUPERFAMILY SSF52540 7 191 4.33E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS11545 6ca2fec148ea28b8a8d5cc09194c798a 292 Pfam PF01926 50S ribosome-binding GTPase 7 118 8.0E-21 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SMGD1_RS11545 6ca2fec148ea28b8a8d5cc09194c798a 292 PANTHER PTHR11649 2 291 2.0E-83 T 22-04-2016 SMGD1_RS11545 6ca2fec148ea28b8a8d5cc09194c798a 292 PANTHER PTHR11649:SF3 2 291 2.0E-83 T 22-04-2016 SMGD1_RS11545 6ca2fec148ea28b8a8d5cc09194c798a 292 Hamap MF_00367 GTPase Era [era]. 2 290 30.873 T 22-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 SMGD1_RS07660 e3397cfdb4b9a12ce2e1b861bf69a2c3 315 Gene3D G3DSA:3.40.50.970 13 312 6.6E-70 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SMGD1_RS07660 e3397cfdb4b9a12ce2e1b861bf69a2c3 315 PANTHER PTHR32154 23 314 1.0E-102 T 22-04-2016 SMGD1_RS07660 e3397cfdb4b9a12ce2e1b861bf69a2c3 315 SUPERFAMILY SSF52518 17 311 1.07E-63 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SMGD1_RS07660 e3397cfdb4b9a12ce2e1b861bf69a2c3 315 PANTHER PTHR32154:SF4 23 314 1.0E-102 T 22-04-2016 SMGD1_RS07660 e3397cfdb4b9a12ce2e1b861bf69a2c3 315 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 50 219 1.4E-23 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 SMGD1_RS05680 a44f601c19dd7b03e3e8b403e7f3fc98 334 PANTHER PTHR10799:SF750 1 70 5.8E-33 T 22-04-2016 SMGD1_RS05680 a44f601c19dd7b03e3e8b403e7f3fc98 334 PANTHER PTHR10799:SF750 211 334 5.8E-33 T 22-04-2016 SMGD1_RS05680 a44f601c19dd7b03e3e8b403e7f3fc98 334 SUPERFAMILY SSF52172 16 161 2.99E-26 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS05680 a44f601c19dd7b03e3e8b403e7f3fc98 334 SMART SM00267 167 334 1.1E-55 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS05680 a44f601c19dd7b03e3e8b403e7f3fc98 334 PANTHER PTHR10799 1 70 5.8E-33 T 22-04-2016 SMGD1_RS05680 a44f601c19dd7b03e3e8b403e7f3fc98 334 PANTHER PTHR10799 211 334 5.8E-33 T 22-04-2016 SMGD1_RS05680 a44f601c19dd7b03e3e8b403e7f3fc98 334 SUPERFAMILY SSF55073 183 334 4.71E-48 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS05680 a44f601c19dd7b03e3e8b403e7f3fc98 334 Pfam PF00072 Response regulator receiver domain 19 128 3.7E-20 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS05680 a44f601c19dd7b03e3e8b403e7f3fc98 334 Gene3D G3DSA:3.30.70.270 180 334 1.0E-51 T 22-04-2016 SMGD1_RS05680 a44f601c19dd7b03e3e8b403e7f3fc98 334 Pfam PF00990 Diguanylate cyclase, GGDEF domain 178 331 1.2E-46 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS05680 a44f601c19dd7b03e3e8b403e7f3fc98 334 SMART SM00448 16 133 1.3E-21 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS05680 a44f601c19dd7b03e3e8b403e7f3fc98 334 Gene3D G3DSA:3.40.50.2300 14 149 4.1E-27 T 22-04-2016 SMGD1_RS05680 a44f601c19dd7b03e3e8b403e7f3fc98 334 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 174 332 2.1E-53 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS12530 9cd28ddfd8d478a1748afbe644471bfd 302 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 9 302 2.3E-153 T 22-04-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 SMGD1_RS12530 9cd28ddfd8d478a1748afbe644471bfd 302 PANTHER PTHR23293:SF6 178 211 3.4E-92 T 22-04-2016 SMGD1_RS12530 9cd28ddfd8d478a1748afbe644471bfd 302 Gene3D G3DSA:3.40.50.620 244 253 8.0E-62 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMGD1_RS12530 9cd28ddfd8d478a1748afbe644471bfd 302 Gene3D G3DSA:3.40.50.620 3 210 8.0E-62 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMGD1_RS12530 9cd28ddfd8d478a1748afbe644471bfd 302 PANTHER PTHR23293 178 211 3.4E-92 T 22-04-2016 SMGD1_RS12530 9cd28ddfd8d478a1748afbe644471bfd 302 SUPERFAMILY SSF52402 5 209 4.93E-73 T 22-04-2016 SMGD1_RS12530 9cd28ddfd8d478a1748afbe644471bfd 302 PANTHER PTHR23293 245 302 3.4E-92 T 22-04-2016 SMGD1_RS12530 9cd28ddfd8d478a1748afbe644471bfd 302 PANTHER PTHR23293 1 158 3.4E-92 T 22-04-2016 SMGD1_RS12530 9cd28ddfd8d478a1748afbe644471bfd 302 PANTHER PTHR23293:SF6 1 158 3.4E-92 T 22-04-2016 SMGD1_RS12530 9cd28ddfd8d478a1748afbe644471bfd 302 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 4 302 55.973 T 22-04-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 SMGD1_RS12530 9cd28ddfd8d478a1748afbe644471bfd 302 PANTHER PTHR23293:SF6 245 302 3.4E-92 T 22-04-2016 SMGD1_RS12530 9cd28ddfd8d478a1748afbe644471bfd 302 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 29 257 6.4E-63 T 22-04-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 SMGD1_RS12530 9cd28ddfd8d478a1748afbe644471bfd 302 PIRSF PIRSF002936 1 302 1.1E-153 T 22-04-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 SMGD1_RS09355 3b682a4d716bc25cec7c735b87c03ad7 351 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 1 348 3.3E-101 T 22-04-2016 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00071+1.3.99.-|KEGG: 00280+1.3.99.-|KEGG: 00281+1.3.99.-|KEGG: 00362+1.3.99.-|KEGG: 00626+1.3.99.-|KEGG: 00930+1.3.99.- SMGD1_RS09355 3b682a4d716bc25cec7c735b87c03ad7 351 Gene3D G3DSA:3.80.30.20 3 218 1.5E-33 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe SMGD1_RS09355 3b682a4d716bc25cec7c735b87c03ad7 351 Pfam PF04055 Radical SAM superfamily 5 173 1.4E-17 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SMGD1_RS09355 3b682a4d716bc25cec7c735b87c03ad7 351 PANTHER PTHR13932 3 310 8.7E-92 T 22-04-2016 SMGD1_RS09355 3b682a4d716bc25cec7c735b87c03ad7 351 SMART SM00729 1 217 1.1E-43 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 SMGD1_RS09355 3b682a4d716bc25cec7c735b87c03ad7 351 SUPERFAMILY SSF102114 2 320 1.83E-82 T 22-04-2016 SMGD1_RS06095 0619e7633f4ca820e679b7c213fe9062 265 SUPERFAMILY SSF81345 3 260 3.92E-35 T 22-04-2016 IPR029022 ABC transporter, BtuC-like SMGD1_RS06095 0619e7633f4ca820e679b7c213fe9062 265 PANTHER PTHR30477 1 265 3.8E-77 T 22-04-2016 SMGD1_RS06095 0619e7633f4ca820e679b7c213fe9062 265 Pfam PF00950 ABC 3 transport family 7 262 3.4E-63 T 22-04-2016 IPR001626 ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 SMGD1_RS06095 0619e7633f4ca820e679b7c213fe9062 265 Gene3D G3DSA:1.10.3470.10 46 264 1.7E-6 T 22-04-2016 IPR029022 ABC transporter, BtuC-like SMGD1_RS06095 0619e7633f4ca820e679b7c213fe9062 265 PANTHER PTHR30477:SF0 1 265 3.8E-77 T 22-04-2016 SMGD1_RS10130 9eac380035bca88723f961bddfa6a843 581 Pfam PF13489 Methyltransferase domain 27 153 3.3E-10 T 22-04-2016 SMGD1_RS10130 9eac380035bca88723f961bddfa6a843 581 SUPERFAMILY SSF53335 8 178 1.94E-22 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS10130 9eac380035bca88723f961bddfa6a843 581 Gene3D G3DSA:3.40.50.150 14 176 9.1E-21 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS10130 9eac380035bca88723f961bddfa6a843 581 Pfam PF13395 HNH endonuclease 472 507 8.5E-7 T 22-04-2016 IPR003615 HNH nuclease SMGD1_RS04860 2564506b6829b3be2e4e4a06fc233d1c 118 SUPERFAMILY SSF53137 9 114 2.43E-36 T 22-04-2016 SMGD1_RS04860 2564506b6829b3be2e4e4a06fc233d1c 118 Gene3D G3DSA:3.30.420.100 29 118 2.0E-22 T 22-04-2016 SMGD1_RS04860 2564506b6829b3be2e4e4a06fc233d1c 118 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 11 118 6.2E-34 T 22-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS04860 2564506b6829b3be2e4e4a06fc233d1c 118 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 8 118 22.135 T 22-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS04860 2564506b6829b3be2e4e4a06fc233d1c 118 PANTHER PTHR12899 6 118 1.7E-22 T 22-04-2016 SMGD1_RS04860 2564506b6829b3be2e4e4a06fc233d1c 118 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 8 118 1.7E-33 T 22-04-2016 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS06575 3e61fb26085373c681f7a82479208612 370 PANTHER PTHR23522:SF3 3 353 1.1E-41 T 22-04-2016 SMGD1_RS06575 3e61fb26085373c681f7a82479208612 370 SUPERFAMILY SSF103473 3 365 1.44E-23 T 22-04-2016 IPR020846 Major facilitator superfamily domain SMGD1_RS06575 3e61fb26085373c681f7a82479208612 370 PANTHER PTHR23522 3 353 1.1E-41 T 22-04-2016 SMGD1_RS06575 3e61fb26085373c681f7a82479208612 370 Pfam PF12832 MFS_1 like family 5 338 1.9E-33 T 22-04-2016 IPR024989 Major facilitator superfamily associated domain SMGD1_RS06575 3e61fb26085373c681f7a82479208612 370 PIRSF PIRSF004925 1 370 9.4E-86 T 22-04-2016 IPR026032 Probable 3-phenylpropionic acid transporter SMGD1_RS06575 3e61fb26085373c681f7a82479208612 370 Gene3D G3DSA:1.20.1250.20 180 361 7.1E-16 T 22-04-2016 SMGD1_RS06575 3e61fb26085373c681f7a82479208612 370 Gene3D G3DSA:1.20.1250.20 4 177 2.2E-8 T 22-04-2016 SMGD1_RS13200 71971fb455d9a70ecd0fef17f39b566d 225 SUPERFAMILY SSF54719 86 191 1.3E-42 T 22-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SMGD1_RS13200 71971fb455d9a70ecd0fef17f39b566d 225 PRINTS PR01703 Manganese superoxide dismutase signature 153 165 2.9E-18 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SMGD1_RS13200 71971fb455d9a70ecd0fef17f39b566d 225 PRINTS PR01703 Manganese superoxide dismutase signature 5 16 2.9E-18 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SMGD1_RS13200 71971fb455d9a70ecd0fef17f39b566d 225 PRINTS PR01703 Manganese superoxide dismutase signature 64 77 2.9E-18 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SMGD1_RS13200 71971fb455d9a70ecd0fef17f39b566d 225 PRINTS PR01703 Manganese superoxide dismutase signature 26 39 2.9E-18 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SMGD1_RS13200 71971fb455d9a70ecd0fef17f39b566d 225 PRINTS PR01703 Manganese superoxide dismutase signature 116 124 2.9E-18 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SMGD1_RS13200 71971fb455d9a70ecd0fef17f39b566d 225 PIRSF PIRSF000349 1 196 1.7E-74 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SMGD1_RS13200 71971fb455d9a70ecd0fef17f39b566d 225 PANTHER PTHR11404 4 207 3.9E-90 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SMGD1_RS13200 71971fb455d9a70ecd0fef17f39b566d 225 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 87 186 1.9E-37 T 22-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SMGD1_RS13200 71971fb455d9a70ecd0fef17f39b566d 225 Gene3D G3DSA:1.10.287.990 19 81 3.0E-20 T 22-04-2016 SMGD1_RS13200 71971fb455d9a70ecd0fef17f39b566d 225 SUPERFAMILY SSF46609 2 81 4.84E-28 T 22-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SMGD1_RS13200 71971fb455d9a70ecd0fef17f39b566d 225 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 80 9.0E-26 T 22-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SMGD1_RS13200 71971fb455d9a70ecd0fef17f39b566d 225 PANTHER PTHR11404:SF8 4 207 3.9E-90 T 22-04-2016 SMGD1_RS13200 71971fb455d9a70ecd0fef17f39b566d 225 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 155 162 - T 22-04-2016 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SMGD1_RS13125 fc3dadf38a63d57ddbdb9fc1137740ca 611 SUPERFAMILY SSF55785 134 257 5.41E-14 T 22-04-2016 IPR000014 PAS domain SMGD1_RS13125 fc3dadf38a63d57ddbdb9fc1137740ca 611 Pfam PF13426 PAS domain 153 260 1.1E-7 T 22-04-2016 IPR000014 PAS domain SMGD1_RS13125 fc3dadf38a63d57ddbdb9fc1137740ca 611 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 139 263 3.2E-11 T 22-04-2016 IPR000014 PAS domain SMGD1_RS13125 fc3dadf38a63d57ddbdb9fc1137740ca 611 Pfam PF00990 Diguanylate cyclase, GGDEF domain 500 563 3.6E-8 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS13125 fc3dadf38a63d57ddbdb9fc1137740ca 611 SMART SM00448 9 124 3.5E-34 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS13125 fc3dadf38a63d57ddbdb9fc1137740ca 611 SUPERFAMILY SSF52172 7 137 2.56E-34 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS13125 fc3dadf38a63d57ddbdb9fc1137740ca 611 TIGRFAM TIGR00277 HDIG: HDIG domain 293 384 1.1E-11 T 22-04-2016 IPR006675 HDIG domain SMGD1_RS13125 fc3dadf38a63d57ddbdb9fc1137740ca 611 SMART SM00091 142 209 1.8E-4 T 22-04-2016 IPR000014 PAS domain SMGD1_RS13125 fc3dadf38a63d57ddbdb9fc1137740ca 611 Gene3D G3DSA:3.30.70.270 484 561 3.4E-9 T 22-04-2016 SMGD1_RS13125 fc3dadf38a63d57ddbdb9fc1137740ca 611 SMART SM00471 289 424 1.2E-11 T 22-04-2016 IPR003607 HD/PDEase domain SMGD1_RS13125 fc3dadf38a63d57ddbdb9fc1137740ca 611 Gene3D G3DSA:1.10.3210.10 288 450 1.9E-23 T 22-04-2016 IPR006674 HD domain SMGD1_RS13125 fc3dadf38a63d57ddbdb9fc1137740ca 611 Pfam PF01966 HD domain 294 415 2.1E-19 T 22-04-2016 IPR006674 HD domain SMGD1_RS13125 fc3dadf38a63d57ddbdb9fc1137740ca 611 SUPERFAMILY SSF55073 494 561 1.26E-8 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS13125 fc3dadf38a63d57ddbdb9fc1137740ca 611 PANTHER PTHR24423 7 172 3.0E-29 T 22-04-2016 SMGD1_RS13125 fc3dadf38a63d57ddbdb9fc1137740ca 611 Gene3D G3DSA:3.40.50.2300 8 129 1.3E-33 T 22-04-2016 SMGD1_RS13125 fc3dadf38a63d57ddbdb9fc1137740ca 611 SUPERFAMILY SSF109604 278 452 6.28E-38 T 22-04-2016 SMGD1_RS13125 fc3dadf38a63d57ddbdb9fc1137740ca 611 Gene3D G3DSA:3.30.450.20 139 257 1.2E-15 T 22-04-2016 SMGD1_RS13125 fc3dadf38a63d57ddbdb9fc1137740ca 611 Pfam PF00072 Response regulator receiver domain 11 124 3.6E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS03675 b1b08b1b9fcf83607bd01a2a6e140832 606 SUPERFAMILY SSF52518 9 186 4.88E-69 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SMGD1_RS03675 b1b08b1b9fcf83607bd01a2a6e140832 606 SUPERFAMILY SSF52518 228 364 4.88E-69 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SMGD1_RS03675 b1b08b1b9fcf83607bd01a2a6e140832 606 PANTHER PTHR11624:SF20 226 605 1.7E-240 T 22-04-2016 SMGD1_RS03675 b1b08b1b9fcf83607bd01a2a6e140832 606 PANTHER PTHR11624:SF20 7 203 1.7E-240 T 22-04-2016 SMGD1_RS03675 b1b08b1b9fcf83607bd01a2a6e140832 606 SMART SM00861 303 467 3.3E-57 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain SMGD1_RS03675 b1b08b1b9fcf83607bd01a2a6e140832 606 PANTHER PTHR11624 226 605 1.7E-240 T 22-04-2016 IPR033247 Transketolase family SMGD1_RS03675 b1b08b1b9fcf83607bd01a2a6e140832 606 PANTHER PTHR11624 7 203 1.7E-240 T 22-04-2016 IPR033247 Transketolase family SMGD1_RS03675 b1b08b1b9fcf83607bd01a2a6e140832 606 Gene3D G3DSA:3.40.50.970 26 175 1.1E-35 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SMGD1_RS03675 b1b08b1b9fcf83607bd01a2a6e140832 606 Gene3D G3DSA:3.40.50.970 217 275 1.1E-35 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SMGD1_RS03675 b1b08b1b9fcf83607bd01a2a6e140832 606 ProSitePatterns PS00802 Transketolase signature 2. 409 425 - T 22-04-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 SMGD1_RS03675 b1b08b1b9fcf83607bd01a2a6e140832 606 Pfam PF02780 Transketolase, C-terminal domain 482 597 1.6E-19 T 22-04-2016 IPR033248 Transketolase, C-terminal domain SMGD1_RS03675 b1b08b1b9fcf83607bd01a2a6e140832 606 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 2 267 6.0E-101 T 22-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 SMGD1_RS03675 b1b08b1b9fcf83607bd01a2a6e140832 606 Gene3D G3DSA:3.40.50.920 481 604 6.6E-23 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 SMGD1_RS03675 b1b08b1b9fcf83607bd01a2a6e140832 606 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 2 603 2.9E-250 T 22-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 SMGD1_RS03675 b1b08b1b9fcf83607bd01a2a6e140832 606 SUPERFAMILY SSF52518 300 475 2.65E-45 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SMGD1_RS03675 b1b08b1b9fcf83607bd01a2a6e140832 606 Gene3D G3DSA:3.40.50.970 276 466 6.6E-67 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SMGD1_RS03675 b1b08b1b9fcf83607bd01a2a6e140832 606 Pfam PF02779 Transketolase, pyrimidine binding domain 305 464 3.4E-33 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain SMGD1_RS03675 b1b08b1b9fcf83607bd01a2a6e140832 606 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 1 606 39.204 T 22-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 SMGD1_RS03675 b1b08b1b9fcf83607bd01a2a6e140832 606 SUPERFAMILY SSF52922 475 603 5.76E-24 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 SMGD1_RS08920 ddd158fcbd0a33e59f4967a73b7590e9 480 Gene3D G3DSA:3.40.190.10 46 126 5.5E-13 T 22-04-2016 SMGD1_RS08920 ddd158fcbd0a33e59f4967a73b7590e9 480 Gene3D G3DSA:3.40.190.10 233 267 5.5E-13 T 22-04-2016 SMGD1_RS08920 ddd158fcbd0a33e59f4967a73b7590e9 480 Pfam PF01464 Transglycosylase SLT domain 303 412 6.6E-21 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 SMGD1_RS08920 ddd158fcbd0a33e59f4967a73b7590e9 480 SUPERFAMILY SSF53850 52 277 4.56E-28 T 22-04-2016 SMGD1_RS08920 ddd158fcbd0a33e59f4967a73b7590e9 480 SUPERFAMILY SSF53955 444 463 1.04E-37 T 22-04-2016 IPR023346 Lysozyme-like domain SMGD1_RS08920 ddd158fcbd0a33e59f4967a73b7590e9 480 SUPERFAMILY SSF53955 253 409 1.04E-37 T 22-04-2016 IPR023346 Lysozyme-like domain SMGD1_RS08920 ddd158fcbd0a33e59f4967a73b7590e9 480 PANTHER PTHR21666 283 478 3.0E-85 T 22-04-2016 SMGD1_RS08920 ddd158fcbd0a33e59f4967a73b7590e9 480 Hamap MF_02016 Membrane-bound lytic murein transglycosylase F [mltF]. 7 479 41.124 T 22-04-2016 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 SMGD1_RS08920 ddd158fcbd0a33e59f4967a73b7590e9 480 SMART SM00062 62 278 1.8E-6 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SMGD1_RS08920 ddd158fcbd0a33e59f4967a73b7590e9 480 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 58 275 7.1E-22 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SMGD1_RS08920 ddd158fcbd0a33e59f4967a73b7590e9 480 Gene3D G3DSA:1.10.530.10 268 406 2.4E-39 T 22-04-2016 SMGD1_RS08920 ddd158fcbd0a33e59f4967a73b7590e9 480 Gene3D G3DSA:1.10.530.10 441 464 2.4E-39 T 22-04-2016 SMGD1_RS08920 ddd158fcbd0a33e59f4967a73b7590e9 480 Gene3D G3DSA:3.40.190.10 127 218 4.3E-5 T 22-04-2016 SMGD1_RS08920 ddd158fcbd0a33e59f4967a73b7590e9 480 PANTHER PTHR21666:SF215 283 478 3.0E-85 T 22-04-2016 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 SMGD1_RS10840 7cc9cbc35aa5148ca26154fa0cca356e 83 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SMGD1_RS10840 7cc9cbc35aa5148ca26154fa0cca356e 83 Pfam PF00037 4Fe-4S binding domain 6 25 8.4E-6 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SMGD1_RS10840 7cc9cbc35aa5148ca26154fa0cca356e 83 Gene3D G3DSA:3.30.70.20 5 71 9.7E-19 T 22-04-2016 SMGD1_RS10840 7cc9cbc35aa5148ca26154fa0cca356e 83 PANTHER PTHR24960:SF38 1 77 5.2E-18 T 22-04-2016 SMGD1_RS10840 7cc9cbc35aa5148ca26154fa0cca356e 83 PANTHER PTHR24960 1 77 5.2E-18 T 22-04-2016 SMGD1_RS10840 7cc9cbc35aa5148ca26154fa0cca356e 83 SUPERFAMILY SSF54862 5 66 4.75E-18 T 22-04-2016 SMGD1_RS13285 92752a921e5b56b8078e847fc13fbd92 316 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 5 144 3.6E-35 T 22-04-2016 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 SMGD1_RS13285 92752a921e5b56b8078e847fc13fbd92 316 Gene3D G3DSA:3.40.50.720 3 145 1.2E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS13285 92752a921e5b56b8078e847fc13fbd92 316 PIRSF PIRSF000102 1 314 3.3E-99 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SMGD1_RS13285 92752a921e5b56b8078e847fc13fbd92 316 SUPERFAMILY SSF51735 5 145 5.54E-42 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS13285 92752a921e5b56b8078e847fc13fbd92 316 SUPERFAMILY SSF56327 145 308 8.5E-47 T 22-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 SMGD1_RS13285 92752a921e5b56b8078e847fc13fbd92 316 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 149 307 1.8E-26 T 22-04-2016 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 SMGD1_RS13285 92752a921e5b56b8078e847fc13fbd92 316 Hamap MF_00487 Malate dehydrogenase [mdh]. 4 309 37.141 T 22-04-2016 IPR011275 Malate dehydrogenase, type 3 GO:0016616|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 SMGD1_RS13285 92752a921e5b56b8078e847fc13fbd92 316 PANTHER PTHR11540:SF16 1 306 5.4E-107 T 22-04-2016 SMGD1_RS13285 92752a921e5b56b8078e847fc13fbd92 316 Gene3D G3DSA:3.90.110.10 146 308 3.0E-50 T 22-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 SMGD1_RS13285 92752a921e5b56b8078e847fc13fbd92 316 PRINTS PR00086 L-lactate dehydrogenase signature 30 54 1.2E-23 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SMGD1_RS13285 92752a921e5b56b8078e847fc13fbd92 316 PRINTS PR00086 L-lactate dehydrogenase signature 118 138 1.2E-23 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SMGD1_RS13285 92752a921e5b56b8078e847fc13fbd92 316 PRINTS PR00086 L-lactate dehydrogenase signature 5 29 1.2E-23 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SMGD1_RS13285 92752a921e5b56b8078e847fc13fbd92 316 PRINTS PR00086 L-lactate dehydrogenase signature 142 160 1.2E-23 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SMGD1_RS13285 92752a921e5b56b8078e847fc13fbd92 316 PRINTS PR00086 L-lactate dehydrogenase signature 172 185 1.2E-23 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SMGD1_RS13285 92752a921e5b56b8078e847fc13fbd92 316 PANTHER PTHR11540 1 306 5.4E-107 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SMGD1_RS07890 72336e3f16f4bc6ba8336fa7343fcdb5 229 PANTHER PTHR24220 2 226 1.3E-63 T 22-04-2016 SMGD1_RS07890 72336e3f16f4bc6ba8336fa7343fcdb5 229 ProSitePatterns PS00211 ABC transporters family signature. 118 132 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMGD1_RS07890 72336e3f16f4bc6ba8336fa7343fcdb5 229 SMART SM00382 22 212 2.1E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain SMGD1_RS07890 72336e3f16f4bc6ba8336fa7343fcdb5 229 Gene3D G3DSA:3.40.50.300 2 219 1.1E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS07890 72336e3f16f4bc6ba8336fa7343fcdb5 229 PANTHER PTHR24220:SF132 2 226 1.3E-63 T 22-04-2016 SMGD1_RS07890 72336e3f16f4bc6ba8336fa7343fcdb5 229 SUPERFAMILY SSF52540 18 221 1.52E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS07890 72336e3f16f4bc6ba8336fa7343fcdb5 229 Pfam PF00005 ABC transporter 20 145 1.3E-19 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMGD1_RS05310 1d8f07f8fdfc00d46059623b892f0a5b 281 TIGRFAM TIGR00433 bioB: biotin synthase 2 274 1.0E-84 T 22-04-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 SMGD1_RS05310 1d8f07f8fdfc00d46059623b892f0a5b 281 Hamap MF_01694 Biotin synthase [bioB]. 2 277 32.083 T 22-04-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 SMGD1_RS05310 1d8f07f8fdfc00d46059623b892f0a5b 281 Pfam PF04055 Radical SAM superfamily 17 174 1.9E-11 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SMGD1_RS05310 1d8f07f8fdfc00d46059623b892f0a5b 281 SMART SM00729 8 216 4.3E-22 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 SMGD1_RS05310 1d8f07f8fdfc00d46059623b892f0a5b 281 PANTHER PTHR22976 2 279 2.2E-81 T 22-04-2016 SMGD1_RS05310 1d8f07f8fdfc00d46059623b892f0a5b 281 Gene3D G3DSA:3.20.20.70 2 276 4.2E-62 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMGD1_RS05310 1d8f07f8fdfc00d46059623b892f0a5b 281 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 195 274 7.0E-11 T 22-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 SMGD1_RS05310 1d8f07f8fdfc00d46059623b892f0a5b 281 PANTHER PTHR22976:SF1 2 279 2.2E-81 T 22-04-2016 SMGD1_RS05310 1d8f07f8fdfc00d46059623b892f0a5b 281 PIRSF PIRSF001619 1 281 6.8E-82 T 22-04-2016 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 SMGD1_RS05310 1d8f07f8fdfc00d46059623b892f0a5b 281 SMART SM00876 185 276 2.8E-19 T 22-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 SMGD1_RS05310 1d8f07f8fdfc00d46059623b892f0a5b 281 SUPERFAMILY SSF102114 4 267 9.81E-53 T 22-04-2016 SMGD1_RS03885 45bdfd43c6003eeef4a63e5ccea69363 150 SUPERFAMILY SSF74982 4 130 2.35E-45 T 22-04-2016 IPR023620 Small protein B SMGD1_RS03885 45bdfd43c6003eeef4a63e5ccea69363 150 Pfam PF01668 SmpB protein 4 66 3.2E-27 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 SMGD1_RS03885 45bdfd43c6003eeef4a63e5ccea69363 150 PANTHER PTHR30308:SF2 2 150 1.2E-66 T 22-04-2016 SMGD1_RS03885 45bdfd43c6003eeef4a63e5ccea69363 150 PANTHER PTHR30308 2 150 1.2E-66 T 22-04-2016 SMGD1_RS03885 45bdfd43c6003eeef4a63e5ccea69363 150 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 5 130 6.0E-61 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 SMGD1_RS03885 45bdfd43c6003eeef4a63e5ccea69363 150 Gene3D G3DSA:2.40.280.10 4 125 2.3E-47 T 22-04-2016 IPR023620 Small protein B SMGD1_RS03885 45bdfd43c6003eeef4a63e5ccea69363 150 Hamap MF_00023 SsrA-binding protein [smpB]. 1 150 64.195 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 SMGD1_RS03885 45bdfd43c6003eeef4a63e5ccea69363 150 TIGRFAM TIGR00086 smpB: SsrA-binding protein 5 148 1.3E-55 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 SMGD1_RS13695 f1305c4a0ae593f3dc30e137d1ca2ffd 262 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 260 9.9E-112 T 22-04-2016 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 SMGD1_RS13695 f1305c4a0ae593f3dc30e137d1ca2ffd 262 SUPERFAMILY SSF117143 93 222 3.92E-37 T 22-04-2016 SMGD1_RS13695 f1305c4a0ae593f3dc30e137d1ca2ffd 262 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 22-04-2016 IPR019776 Flagellar basal body rod protein, conserved site SMGD1_RS13695 f1305c4a0ae593f3dc30e137d1ca2ffd 262 PANTHER PTHR30435:SF19 1 262 3.3E-118 T 22-04-2016 SMGD1_RS13695 f1305c4a0ae593f3dc30e137d1ca2ffd 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 136 4.3E-46 T 22-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G SMGD1_RS13695 f1305c4a0ae593f3dc30e137d1ca2ffd 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 148 243 7.1E-29 T 22-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G SMGD1_RS13695 f1305c4a0ae593f3dc30e137d1ca2ffd 262 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 182 260 7.3E-24 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain SMGD1_RS13695 f1305c4a0ae593f3dc30e137d1ca2ffd 262 Pfam PF00460 Flagella basal body rod protein 5 35 1.0E-8 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 SMGD1_RS13695 f1305c4a0ae593f3dc30e137d1ca2ffd 262 PANTHER PTHR30435 1 262 3.3E-118 T 22-04-2016 SMGD1_RS05110 7a66e019677717e25727b3e231013936 119 PRINTS PR00062 Ribosomal protein L20 signature 75 101 1.3E-38 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 SMGD1_RS05110 7a66e019677717e25727b3e231013936 119 PRINTS PR00062 Ribosomal protein L20 signature 42 71 1.3E-38 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 SMGD1_RS05110 7a66e019677717e25727b3e231013936 119 PRINTS PR00062 Ribosomal protein L20 signature 12 41 1.3E-38 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 SMGD1_RS05110 7a66e019677717e25727b3e231013936 119 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 SMGD1_RS05110 7a66e019677717e25727b3e231013936 119 PANTHER PTHR10986 2 118 8.2E-61 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 SMGD1_RS05110 7a66e019677717e25727b3e231013936 119 Pfam PF00453 Ribosomal protein L20 3 108 2.0E-46 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 SMGD1_RS05110 7a66e019677717e25727b3e231013936 119 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 1.3E-48 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 SMGD1_RS05110 7a66e019677717e25727b3e231013936 119 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 28.595 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 SMGD1_RS05110 7a66e019677717e25727b3e231013936 119 SUPERFAMILY SSF74731 2 117 1.44E-47 T 22-04-2016 SMGD1_RS05110 7a66e019677717e25727b3e231013936 119 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 20 72 1.0E-12 T 22-04-2016 SMGD1_RS05110 7a66e019677717e25727b3e231013936 119 Gene3D G3DSA:1.10.1900.20 55 117 1.5E-29 T 22-04-2016 SMGD1_RS05110 7a66e019677717e25727b3e231013936 119 PANTHER PTHR10986:SF12 2 118 8.2E-61 T 22-04-2016 SMGD1_RS09545 a89c22fbd413eeba8ce197699a0b500d 320 Pfam PF06144 DNA polymerase III, delta subunit 20 176 6.0E-12 T 22-04-2016 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 SMGD1_RS09545 a89c22fbd413eeba8ce197699a0b500d 320 Gene3D G3DSA:1.10.8.60 136 211 1.5E-6 T 22-04-2016 SMGD1_RS09545 a89c22fbd413eeba8ce197699a0b500d 320 Gene3D G3DSA:3.40.50.300 2 116 3.8E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS09545 a89c22fbd413eeba8ce197699a0b500d 320 PANTHER PTHR34388 1 315 2.9E-20 T 22-04-2016 SMGD1_RS09545 a89c22fbd413eeba8ce197699a0b500d 320 SUPERFAMILY SSF52540 6 193 2.86E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS01765 d35626cff32d0b607aaa3c104c844956 336 SUPERFAMILY SSF55785 15 129 3.44E-22 T 22-04-2016 IPR000014 PAS domain SMGD1_RS01765 d35626cff32d0b607aaa3c104c844956 336 SMART SM00086 85 127 6.8E-6 T 22-04-2016 IPR001610 PAC motif SMGD1_RS01765 d35626cff32d0b607aaa3c104c844956 336 SMART SM00086 224 266 1.3E-4 T 22-04-2016 IPR001610 PAC motif SMGD1_RS01765 d35626cff32d0b607aaa3c104c844956 336 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 164 272 2.9E-15 T 22-04-2016 IPR000014 PAS domain SMGD1_RS01765 d35626cff32d0b607aaa3c104c844956 336 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 27 133 2.0E-10 T 22-04-2016 IPR000014 PAS domain SMGD1_RS01765 d35626cff32d0b607aaa3c104c844956 336 Gene3D G3DSA:3.30.450.20 164 265 8.9E-26 T 22-04-2016 SMGD1_RS01765 d35626cff32d0b607aaa3c104c844956 336 SUPERFAMILY SSF55073 281 335 9.42E-10 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS01765 d35626cff32d0b607aaa3c104c844956 336 Pfam PF00989 PAS fold 168 263 2.9E-16 T 22-04-2016 IPR013767 PAS fold GO:0006355 SMGD1_RS01765 d35626cff32d0b607aaa3c104c844956 336 SUPERFAMILY SSF55785 164 263 2.42E-26 T 22-04-2016 IPR000014 PAS domain SMGD1_RS01765 d35626cff32d0b607aaa3c104c844956 336 Gene3D G3DSA:3.30.70.270 278 335 5.5E-11 T 22-04-2016 SMGD1_RS01765 d35626cff32d0b607aaa3c104c844956 336 PANTHER PTHR24423 26 273 4.3E-27 T 22-04-2016 SMGD1_RS01765 d35626cff32d0b607aaa3c104c844956 336 SMART SM00091 8 79 2.7 T 22-04-2016 IPR000014 PAS domain SMGD1_RS01765 d35626cff32d0b607aaa3c104c844956 336 SMART SM00091 150 218 1.6E-4 T 22-04-2016 IPR000014 PAS domain SMGD1_RS01765 d35626cff32d0b607aaa3c104c844956 336 Gene3D G3DSA:3.30.450.20 12 129 3.6E-25 T 22-04-2016 SMGD1_RS01765 d35626cff32d0b607aaa3c104c844956 336 Pfam PF00990 Diguanylate cyclase, GGDEF domain 278 335 6.3E-11 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS01765 d35626cff32d0b607aaa3c104c844956 336 Pfam PF08447 PAS fold 34 120 2.5E-17 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 SMGD1_RS07125 e5840e96e698557d13afb225fcb2a473 419 SUPERFAMILY SSF47240 177 343 4.33E-39 T 22-04-2016 IPR009078 Ferritin-like superfamily SMGD1_RS07125 e5840e96e698557d13afb225fcb2a473 419 Pfam PF04305 Protein of unknown function (DUF455) 228 333 5.9E-7 T 22-04-2016 IPR007402 Protein of unknown function DUF455 SMGD1_RS07125 e5840e96e698557d13afb225fcb2a473 419 Gene3D G3DSA:3.30.110.40 25 76 1.3E-4 T 22-04-2016 IPR001455 TusA-like domain SMGD1_RS07125 e5840e96e698557d13afb225fcb2a473 419 Gene3D G3DSA:1.20.1260.10 189 320 5.9E-5 T 22-04-2016 IPR012347 Ferritin-related SMGD1_RS08935 ca06e5161a839918e12c7d77cd8b18f2 333 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 157 314 6.8E-62 T 22-04-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 SMGD1_RS08935 ca06e5161a839918e12c7d77cd8b18f2 333 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 4 152 2.4E-56 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 SMGD1_RS08935 ca06e5161a839918e12c7d77cd8b18f2 333 PANTHER PTHR10836:SF50 1 333 1.5E-173 T 22-04-2016 SMGD1_RS08935 ca06e5161a839918e12c7d77cd8b18f2 333 Gene3D G3DSA:3.30.360.10 161 316 1.1E-67 T 22-04-2016 SMGD1_RS08935 ca06e5161a839918e12c7d77cd8b18f2 333 SUPERFAMILY SSF55347 152 315 5.92E-64 T 22-04-2016 SMGD1_RS08935 ca06e5161a839918e12c7d77cd8b18f2 333 PIRSF PIRSF000149 1 333 1.1E-129 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SMGD1_RS08935 ca06e5161a839918e12c7d77cd8b18f2 333 SUPERFAMILY SSF51735 4 168 1.69E-58 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS08935 ca06e5161a839918e12c7d77cd8b18f2 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 110 123 2.0E-33 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SMGD1_RS08935 ca06e5161a839918e12c7d77cd8b18f2 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 270 285 2.0E-33 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SMGD1_RS08935 ca06e5161a839918e12c7d77cd8b18f2 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 230 247 2.0E-33 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SMGD1_RS08935 ca06e5161a839918e12c7d77cd8b18f2 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 146 164 2.0E-33 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SMGD1_RS08935 ca06e5161a839918e12c7d77cd8b18f2 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 173 189 2.0E-33 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SMGD1_RS08935 ca06e5161a839918e12c7d77cd8b18f2 333 Gene3D G3DSA:3.40.50.720 1 160 4.3E-70 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS08935 ca06e5161a839918e12c7d77cd8b18f2 333 PANTHER PTHR10836 1 333 1.5E-173 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SMGD1_RS08935 ca06e5161a839918e12c7d77cd8b18f2 333 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 150 157 - T 22-04-2016 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: REACT_474 SMGD1_RS08935 ca06e5161a839918e12c7d77cd8b18f2 333 SMART SM00846 3 152 2.5E-78 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 SMGD1_RS08935 ca06e5161a839918e12c7d77cd8b18f2 333 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 326 1.9E-129 T 22-04-2016 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: REACT_474|UniPathway: UPA00109 SMGD1_RS13945 cb68a55d3afb69c34f267d8f13881874 293 PANTHER PTHR32479 1 287 3.1E-55 T 22-04-2016 SMGD1_RS13945 cb68a55d3afb69c34f267d8f13881874 293 PANTHER PTHR32479:SF12 1 287 3.1E-55 T 22-04-2016 SMGD1_RS13945 cb68a55d3afb69c34f267d8f13881874 293 Pfam PF02754 Cysteine-rich domain 151 245 3.6E-8 T 22-04-2016 IPR004017 Cysteine-rich domain SMGD1_RS13945 cb68a55d3afb69c34f267d8f13881874 293 Pfam PF02754 Cysteine-rich domain 6 86 7.6E-15 T 22-04-2016 IPR004017 Cysteine-rich domain SMGD1_RS06090 dbe1c711fa7dcef2ed973c3953ca8c46 228 Pfam PF13489 Methyltransferase domain 23 136 1.8E-9 T 22-04-2016 SMGD1_RS06090 dbe1c711fa7dcef2ed973c3953ca8c46 228 Gene3D G3DSA:3.40.50.150 6 145 9.5E-22 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS06090 dbe1c711fa7dcef2ed973c3953ca8c46 228 SUPERFAMILY SSF53335 7 221 6.6E-23 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS06275 d7ddc70f2c3ef960c644056e315293c7 451 PANTHER PTHR33121:SF10 183 443 6.4E-16 T 22-04-2016 SMGD1_RS06275 d7ddc70f2c3ef960c644056e315293c7 451 Gene3D G3DSA:3.30.70.270 57 172 2.2E-11 T 22-04-2016 SMGD1_RS06275 d7ddc70f2c3ef960c644056e315293c7 451 Pfam PF00990 Diguanylate cyclase, GGDEF domain 58 154 9.3E-9 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS06275 d7ddc70f2c3ef960c644056e315293c7 451 Pfam PF00563 EAL domain 222 444 3.7E-37 T 22-04-2016 IPR001633 EAL domain SMGD1_RS06275 d7ddc70f2c3ef960c644056e315293c7 451 PANTHER PTHR33121 183 443 6.4E-16 T 22-04-2016 SMGD1_RS06275 d7ddc70f2c3ef960c644056e315293c7 451 SMART SM00267 43 205 0.0034 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS06275 d7ddc70f2c3ef960c644056e315293c7 451 SMART SM00052 212 447 5.5E-8 T 22-04-2016 IPR001633 EAL domain SMGD1_RS06275 d7ddc70f2c3ef960c644056e315293c7 451 Gene3D G3DSA:3.20.20.450 222 444 6.2E-35 T 22-04-2016 IPR001633 EAL domain SMGD1_RS06275 d7ddc70f2c3ef960c644056e315293c7 451 SUPERFAMILY SSF55073 60 173 2.12E-10 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS06275 d7ddc70f2c3ef960c644056e315293c7 451 SUPERFAMILY SSF141868 219 443 2.09E-33 T 22-04-2016 IPR001633 EAL domain SMGD1_RS09220 2830f74fbb15f9fd199ec2eea516e2e9 275 SUPERFAMILY SSF53335 46 273 3.7E-38 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS09220 2830f74fbb15f9fd199ec2eea516e2e9 275 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 56 275 3.7E-57 T 22-04-2016 SMGD1_RS09220 2830f74fbb15f9fd199ec2eea516e2e9 275 Gene3D G3DSA:3.40.50.150 91 269 4.6E-32 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS09220 2830f74fbb15f9fd199ec2eea516e2e9 275 PIRSF PIRSF000401 10 275 1.5E-64 T 22-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 SMGD1_RS09220 2830f74fbb15f9fd199ec2eea516e2e9 275 PANTHER PTHR18895 81 275 2.4E-46 T 22-04-2016 SMGD1_RS09220 2830f74fbb15f9fd199ec2eea516e2e9 275 PANTHER PTHR18895:SF3 81 275 2.4E-46 T 22-04-2016 SMGD1_RS09220 2830f74fbb15f9fd199ec2eea516e2e9 275 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 1 274 27.442 T 22-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 SMGD1_RS01710 45dc9b17cc09e9f417d736d3e5263bcd 694 SUPERFAMILY SSF52540 470 669 2.86E-104 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS01710 45dc9b17cc09e9f417d736d3e5263bcd 694 SUPERFAMILY SSF52540 4 415 2.86E-104 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS01710 45dc9b17cc09e9f417d736d3e5263bcd 694 Pfam PF13361 UvrD-like helicase C-terminal domain 270 653 2.6E-50 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 SMGD1_RS01710 45dc9b17cc09e9f417d736d3e5263bcd 694 Gene3D G3DSA:3.40.50.300 4 268 8.2E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS01710 45dc9b17cc09e9f417d736d3e5263bcd 694 PANTHER PTHR11070 566 670 7.8E-110 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 SMGD1_RS01710 45dc9b17cc09e9f417d736d3e5263bcd 694 PANTHER PTHR11070 3 486 7.8E-110 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 SMGD1_RS01710 45dc9b17cc09e9f417d736d3e5263bcd 694 Gene3D G3DSA:3.40.50.300 272 382 1.8E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS01710 45dc9b17cc09e9f417d736d3e5263bcd 694 Gene3D G3DSA:3.40.50.300 589 671 1.8E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS01710 45dc9b17cc09e9f417d736d3e5263bcd 694 Pfam PF00580 UvrD/REP helicase N-terminal domain 162 263 6.8E-19 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 SMGD1_RS01710 45dc9b17cc09e9f417d736d3e5263bcd 694 Pfam PF00580 UvrD/REP helicase N-terminal domain 6 106 9.1E-24 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 SMGD1_RS12145 356e22a71a00e239043ffac48231a444 324 SUPERFAMILY SSF47384 92 166 9.61E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS12145 356e22a71a00e239043ffac48231a444 324 PANTHER PTHR24423:SF445 1 31 1.2E-34 T 22-04-2016 SMGD1_RS12145 356e22a71a00e239043ffac48231a444 324 PANTHER PTHR24423:SF445 95 323 1.2E-34 T 22-04-2016 SMGD1_RS12145 356e22a71a00e239043ffac48231a444 324 PANTHER PTHR24423:SF445 56 74 1.2E-34 T 22-04-2016 SMGD1_RS12145 356e22a71a00e239043ffac48231a444 324 SMART SM00387 207 319 2.7E-16 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS12145 356e22a71a00e239043ffac48231a444 324 Gene3D G3DSA:1.10.287.130 92 161 1.6E-4 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS12145 356e22a71a00e239043ffac48231a444 324 SUPERFAMILY SSF55874 169 319 3.93E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS12145 356e22a71a00e239043ffac48231a444 324 SMART SM00388 97 167 0.0093 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS12145 356e22a71a00e239043ffac48231a444 324 Gene3D G3DSA:3.30.565.10 172 317 1.1E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS12145 356e22a71a00e239043ffac48231a444 324 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 211 316 8.6E-16 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS12145 356e22a71a00e239043ffac48231a444 324 PRINTS PR00344 Bacterial sensor protein C-terminal signature 279 297 2.3E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS12145 356e22a71a00e239043ffac48231a444 324 PRINTS PR00344 Bacterial sensor protein C-terminal signature 266 276 2.3E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS12145 356e22a71a00e239043ffac48231a444 324 PRINTS PR00344 Bacterial sensor protein C-terminal signature 248 262 2.3E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS12145 356e22a71a00e239043ffac48231a444 324 PRINTS PR00344 Bacterial sensor protein C-terminal signature 303 316 2.3E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS12145 356e22a71a00e239043ffac48231a444 324 PANTHER PTHR24423 1 31 1.2E-34 T 22-04-2016 SMGD1_RS12145 356e22a71a00e239043ffac48231a444 324 PANTHER PTHR24423 95 323 1.2E-34 T 22-04-2016 SMGD1_RS12145 356e22a71a00e239043ffac48231a444 324 PANTHER PTHR24423 56 74 1.2E-34 T 22-04-2016 SMGD1_RS14335 56b08a41be30abdc6fdad8e30e8fe279 359 SUPERFAMILY SSF53335 25 354 5.61E-63 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS14335 56b08a41be30abdc6fdad8e30e8fe279 359 Gene3D G3DSA:3.40.50.150 172 354 9.6E-45 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS14335 56b08a41be30abdc6fdad8e30e8fe279 359 TIGRFAM TIGR01444 fkbM_fam: methyltransferase, FkbM family 190 313 3.3E-17 T 22-04-2016 IPR006342 Methyltransferase FkbM KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- SMGD1_RS14335 56b08a41be30abdc6fdad8e30e8fe279 359 Pfam PF05050 Methyltransferase FkbM domain 192 317 9.7E-11 T 22-04-2016 IPR006342 Methyltransferase FkbM KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- SMGD1_RS07645 2a0f5d0e21b005c34c2f59e0cd61a926 185 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 10 182 2.3E-29 T 22-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 SMGD1_RS07645 2a0f5d0e21b005c34c2f59e0cd61a926 185 Gene3D G3DSA:3.40.920.10 1 185 1.8E-48 T 22-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 SMGD1_RS07645 2a0f5d0e21b005c34c2f59e0cd61a926 185 SUPERFAMILY SSF53323 1 185 1.57E-43 T 22-04-2016 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 SMGD1_RS07645 2a0f5d0e21b005c34c2f59e0cd61a926 185 TIGRFAM TIGR02175 PorC_KorC: 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family 1 185 1.1E-48 T 22-04-2016 IPR011894 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate GO:0016625|GO:0055114 SMGD1_RS07645 2a0f5d0e21b005c34c2f59e0cd61a926 185 PANTHER PTHR32154 1 185 1.1E-39 T 22-04-2016 SMGD1_RS07645 2a0f5d0e21b005c34c2f59e0cd61a926 185 PANTHER PTHR32154:SF2 1 185 1.1E-39 T 22-04-2016 SMGD1_RS09775 0ae3639c5390b3e8d5441dab89e49a7b 474 Gene3D G3DSA:3.40.50.620 344 453 1.3E-31 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMGD1_RS09775 0ae3639c5390b3e8d5441dab89e49a7b 474 Pfam PF01467 Cytidylyltransferase-like 349 439 5.0E-12 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 SMGD1_RS09775 0ae3639c5390b3e8d5441dab89e49a7b 474 Hamap MF_01603 Bifunctional protein HldE [hldE]. 3 474 41.08 T 22-04-2016 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 SMGD1_RS09775 0ae3639c5390b3e8d5441dab89e49a7b 474 PANTHER PTHR10584 10 340 1.9E-108 T 22-04-2016 SMGD1_RS09775 0ae3639c5390b3e8d5441dab89e49a7b 474 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 9 312 2.8E-114 T 22-04-2016 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 SMGD1_RS09775 0ae3639c5390b3e8d5441dab89e49a7b 474 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 335 472 6.4E-58 T 22-04-2016 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 SMGD1_RS09775 0ae3639c5390b3e8d5441dab89e49a7b 474 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 346 411 4.9E-14 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 SMGD1_RS09775 0ae3639c5390b3e8d5441dab89e49a7b 474 SUPERFAMILY SSF53613 9 315 8.42E-55 T 22-04-2016 IPR029056 Ribokinase-like SMGD1_RS09775 0ae3639c5390b3e8d5441dab89e49a7b 474 Pfam PF00294 pfkB family carbohydrate kinase 10 304 1.4E-41 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB SMGD1_RS09775 0ae3639c5390b3e8d5441dab89e49a7b 474 PANTHER PTHR10584:SF159 10 340 1.9E-108 T 22-04-2016 SMGD1_RS09775 0ae3639c5390b3e8d5441dab89e49a7b 474 SUPERFAMILY SSF52374 344 470 8.3E-22 T 22-04-2016 SMGD1_RS09775 0ae3639c5390b3e8d5441dab89e49a7b 474 Gene3D G3DSA:3.40.1190.20 10 314 8.1E-60 T 22-04-2016 IPR029056 Ribokinase-like SMGD1_RS08535 4315b1c4a9e7c74fa4908a083cc703f0 254 SUPERFAMILY SSF52313 4 236 1.2E-94 T 22-04-2016 IPR023591 Ribosomal protein S2, flavodoxin-like domain SMGD1_RS08535 4315b1c4a9e7c74fa4908a083cc703f0 254 Pfam PF00318 Ribosomal protein S2 7 222 8.3E-94 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS08535 4315b1c4a9e7c74fa4908a083cc703f0 254 PRINTS PR00395 Ribosomal protein S2 signature 85 102 1.5E-36 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS08535 4315b1c4a9e7c74fa4908a083cc703f0 254 PRINTS PR00395 Ribosomal protein S2 signature 173 184 1.5E-36 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS08535 4315b1c4a9e7c74fa4908a083cc703f0 254 PRINTS PR00395 Ribosomal protein S2 signature 194 208 1.5E-36 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS08535 4315b1c4a9e7c74fa4908a083cc703f0 254 PRINTS PR00395 Ribosomal protein S2 signature 156 173 1.5E-36 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS08535 4315b1c4a9e7c74fa4908a083cc703f0 254 PRINTS PR00395 Ribosomal protein S2 signature 35 44 1.5E-36 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS08535 4315b1c4a9e7c74fa4908a083cc703f0 254 PRINTS PR00395 Ribosomal protein S2 signature 4 22 1.5E-36 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS08535 4315b1c4a9e7c74fa4908a083cc703f0 254 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 1 223 39.102 T 22-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 SMGD1_RS08535 4315b1c4a9e7c74fa4908a083cc703f0 254 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 1 224 2.3E-106 T 22-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 SMGD1_RS08535 4315b1c4a9e7c74fa4908a083cc703f0 254 Gene3D G3DSA:1.10.287.610 98 150 8.7E-24 T 22-04-2016 SMGD1_RS08535 4315b1c4a9e7c74fa4908a083cc703f0 254 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 156 180 - T 22-04-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 SMGD1_RS08535 4315b1c4a9e7c74fa4908a083cc703f0 254 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 4 15 - T 22-04-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 SMGD1_RS08535 4315b1c4a9e7c74fa4908a083cc703f0 254 PANTHER PTHR12534 1 242 5.8E-116 T 22-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 SMGD1_RS08535 4315b1c4a9e7c74fa4908a083cc703f0 254 Gene3D G3DSA:3.40.50.10490 156 249 1.9E-65 T 22-04-2016 SMGD1_RS08535 4315b1c4a9e7c74fa4908a083cc703f0 254 Gene3D G3DSA:3.40.50.10490 21 97 1.9E-65 T 22-04-2016 SMGD1_RS03410 c7f43bbbf42242a3659b871c76a71075 195 Pfam PF13730 Helix-turn-helix domain 20 73 2.7E-10 T 22-04-2016 SMGD1_RS08805 88c4ddc7f6ff15a76a9bc1f8a53e5733 722 Pfam PF08376 Nitrate and nitrite sensing 205 441 3.4E-37 T 22-04-2016 IPR013587 Nitrate/nitrite sensing protein SMGD1_RS08805 88c4ddc7f6ff15a76a9bc1f8a53e5733 722 PANTHER PTHR10799 22 93 7.9E-24 T 22-04-2016 SMGD1_RS08805 88c4ddc7f6ff15a76a9bc1f8a53e5733 722 PANTHER PTHR10799 592 716 7.9E-24 T 22-04-2016 SMGD1_RS08805 88c4ddc7f6ff15a76a9bc1f8a53e5733 722 SUPERFAMILY SSF55073 564 721 9.42E-47 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS08805 88c4ddc7f6ff15a76a9bc1f8a53e5733 722 PANTHER PTHR10799:SF686 22 93 7.9E-24 T 22-04-2016 SMGD1_RS08805 88c4ddc7f6ff15a76a9bc1f8a53e5733 722 PANTHER PTHR10799:SF686 592 716 7.9E-24 T 22-04-2016 SMGD1_RS08805 88c4ddc7f6ff15a76a9bc1f8a53e5733 722 Pfam PF01814 Hemerythrin HHE cation binding domain 12 121 3.1E-8 T 22-04-2016 IPR012312 Haemerythrin-like SMGD1_RS08805 88c4ddc7f6ff15a76a9bc1f8a53e5733 722 Pfam PF00990 Diguanylate cyclase, GGDEF domain 559 716 1.2E-42 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS08805 88c4ddc7f6ff15a76a9bc1f8a53e5733 722 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 555 718 7.3E-51 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS08805 88c4ddc7f6ff15a76a9bc1f8a53e5733 722 SUPERFAMILY SSF47188 1 124 3.66E-25 T 22-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 SMGD1_RS08805 88c4ddc7f6ff15a76a9bc1f8a53e5733 722 SMART SM00267 548 721 2.0E-46 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS08805 88c4ddc7f6ff15a76a9bc1f8a53e5733 722 Gene3D G3DSA:3.30.70.270 561 721 3.1E-50 T 22-04-2016 SMGD1_RS08805 88c4ddc7f6ff15a76a9bc1f8a53e5733 722 Gene3D G3DSA:1.20.120.50 1 122 3.4E-28 T 22-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 SMGD1_RS08805 88c4ddc7f6ff15a76a9bc1f8a53e5733 722 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 3 123 1.5E-30 T 22-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 SMGD1_RS09340 811bb80b2584bd1f36f7b667fb2ff8ff 342 Gene3D G3DSA:2.40.10.240 69 140 7.2E-17 T 22-04-2016 SMGD1_RS09340 811bb80b2584bd1f36f7b667fb2ff8ff 342 PANTHER PTHR30307:SF0 7 342 2.4E-118 T 22-04-2016 SMGD1_RS09340 811bb80b2584bd1f36f7b667fb2ff8ff 342 Pfam PF02547 Queuosine biosynthesis protein 9 341 2.1E-107 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 SMGD1_RS09340 811bb80b2584bd1f36f7b667fb2ff8ff 342 Gene3D G3DSA:3.40.1780.10 8 67 1.3E-76 T 22-04-2016 SMGD1_RS09340 811bb80b2584bd1f36f7b667fb2ff8ff 342 Gene3D G3DSA:3.40.1780.10 187 342 1.3E-76 T 22-04-2016 SMGD1_RS09340 811bb80b2584bd1f36f7b667fb2ff8ff 342 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 6 342 39.137 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 SMGD1_RS09340 811bb80b2584bd1f36f7b667fb2ff8ff 342 SUPERFAMILY SSF111337 9 342 1.31E-110 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 SMGD1_RS09340 811bb80b2584bd1f36f7b667fb2ff8ff 342 PANTHER PTHR30307 7 342 2.4E-118 T 22-04-2016 SMGD1_RS09340 811bb80b2584bd1f36f7b667fb2ff8ff 342 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 8 342 5.7E-115 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 SMGD1_RS12740 a427520bb887447667b8ae8e3b23a472 345 SUPERFAMILY SSF56059 128 307 1.77E-34 T 22-04-2016 SMGD1_RS12740 a427520bb887447667b8ae8e3b23a472 345 Pfam PF07478 D-ala D-ala ligase C-terminus 150 303 1.3E-33 T 22-04-2016 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SMGD1_RS12740 a427520bb887447667b8ae8e3b23a472 345 Gene3D G3DSA:3.30.1490.20 158 204 2.2E-18 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SMGD1_RS12740 a427520bb887447667b8ae8e3b23a472 345 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 3 324 1.3E-80 T 22-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SMGD1_RS12740 a427520bb887447667b8ae8e3b23a472 345 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 1 328 27.354 T 22-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SMGD1_RS12740 a427520bb887447667b8ae8e3b23a472 345 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 95 106 - T 22-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SMGD1_RS12740 a427520bb887447667b8ae8e3b23a472 345 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 275 302 - T 22-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SMGD1_RS12740 a427520bb887447667b8ae8e3b23a472 345 PANTHER PTHR23132 1 302 3.0E-46 T 22-04-2016 SMGD1_RS12740 a427520bb887447667b8ae8e3b23a472 345 Pfam PF01820 D-ala D-ala ligase N-terminus 2 117 3.6E-17 T 22-04-2016 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SMGD1_RS12740 a427520bb887447667b8ae8e3b23a472 345 SUPERFAMILY SSF52440 2 127 4.6E-23 T 22-04-2016 IPR016185 Pre-ATP-grasp domain SMGD1_RS12740 a427520bb887447667b8ae8e3b23a472 345 Gene3D G3DSA:3.30.470.20 205 310 2.2E-18 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SMGD1_RS12740 a427520bb887447667b8ae8e3b23a472 345 Gene3D G3DSA:3.40.50.20 2 117 1.0E-18 T 22-04-2016 IPR016185 Pre-ATP-grasp domain SMGD1_RS08260 ba4f621602291193692b2e2f956e3eb3 414 Pfam PF00999 Sodium/hydrogen exchanger family 9 381 3.1E-28 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 SMGD1_RS08260 ba4f621602291193692b2e2f956e3eb3 414 PANTHER PTHR32507 1 406 2.0E-55 T 22-04-2016 SMGD1_RS08260 ba4f621602291193692b2e2f956e3eb3 414 PANTHER PTHR32507:SF10 1 406 2.0E-55 T 22-04-2016 SMGD1_RS08030 5ebaba68a0d740503559f4fa9708bfdd 476 Pfam PF00120 Glutamine synthetase, catalytic domain 107 470 3.4E-122 T 22-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SMGD1_RS08030 5ebaba68a0d740503559f4fa9708bfdd 476 ProSitePatterns PS00180 Glutamine synthetase signature 1. 55 73 - T 22-04-2016 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SMGD1_RS08030 5ebaba68a0d740503559f4fa9708bfdd 476 PANTHER PTHR20852:SF15 7 143 9.2E-209 T 22-04-2016 SMGD1_RS08030 5ebaba68a0d740503559f4fa9708bfdd 476 PANTHER PTHR20852:SF15 161 476 9.2E-209 T 22-04-2016 SMGD1_RS08030 5ebaba68a0d740503559f4fa9708bfdd 476 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 19 99 1.8E-30 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SMGD1_RS08030 5ebaba68a0d740503559f4fa9708bfdd 476 Gene3D G3DSA:3.30.590.10 111 455 1.0E-119 T 22-04-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 SMGD1_RS08030 5ebaba68a0d740503559f4fa9708bfdd 476 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 9 474 3.3E-185 T 22-04-2016 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SMGD1_RS08030 5ebaba68a0d740503559f4fa9708bfdd 476 SMART SM01230 107 385 2.6E-133 T 22-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SMGD1_RS08030 5ebaba68a0d740503559f4fa9708bfdd 476 SUPERFAMILY SSF55931 107 475 1.96E-120 T 22-04-2016 SMGD1_RS08030 5ebaba68a0d740503559f4fa9708bfdd 476 SUPERFAMILY SSF54368 8 105 1.07E-33 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SMGD1_RS08030 5ebaba68a0d740503559f4fa9708bfdd 476 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 264 279 - T 22-04-2016 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SMGD1_RS08030 5ebaba68a0d740503559f4fa9708bfdd 476 PANTHER PTHR20852 7 143 9.2E-209 T 22-04-2016 SMGD1_RS08030 5ebaba68a0d740503559f4fa9708bfdd 476 PANTHER PTHR20852 161 476 9.2E-209 T 22-04-2016 SMGD1_RS08030 5ebaba68a0d740503559f4fa9708bfdd 476 Gene3D G3DSA:3.10.20.70 9 110 1.5E-35 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SMGD1_RS08165 369f2734a8ced081c16cbcb59f967b2c 319 Gene3D G3DSA:3.80.30.20 22 250 1.7E-26 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe SMGD1_RS08165 369f2734a8ced081c16cbcb59f967b2c 319 Pfam PF04055 Radical SAM superfamily 41 222 1.6E-11 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SMGD1_RS08165 369f2734a8ced081c16cbcb59f967b2c 319 SUPERFAMILY SSF102114 5 272 8.76E-43 T 22-04-2016 SMGD1_RS08165 369f2734a8ced081c16cbcb59f967b2c 319 SMART SM00729 21 269 8.2E-44 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 SMGD1_RS08165 369f2734a8ced081c16cbcb59f967b2c 319 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 5 314 2.2E-83 T 22-04-2016 IPR005911 Protein YhcC-like GO:0051536 SMGD1_RS08165 369f2734a8ced081c16cbcb59f967b2c 319 PANTHER PTHR11135 2 312 9.0E-103 T 22-04-2016 SMGD1_RS08165 369f2734a8ced081c16cbcb59f967b2c 319 Pfam PF16199 Radical_SAM C-terminal domain 230 310 8.1E-17 T 22-04-2016 IPR032432 Radical SAM, C-terminal extension SMGD1_RS08165 369f2734a8ced081c16cbcb59f967b2c 319 PANTHER PTHR11135:SF1 2 312 9.0E-103 T 22-04-2016 IPR005911 Protein YhcC-like GO:0051536 SMGD1_RS06240 b0115991c18d0878e7270a042592e76f 426 PIRSF PIRSF001369 39 425 2.8E-146 T 22-04-2016 IPR024176 Citrate synthase, bacterial-type UniPathway: UPA00223 SMGD1_RS06240 b0115991c18d0878e7270a042592e76f 426 SUPERFAMILY SSF48256 7 422 1.44E-146 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 SMGD1_RS06240 b0115991c18d0878e7270a042592e76f 426 PRINTS PR00143 Citrate synthase signature 243 271 6.6E-48 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 SMGD1_RS06240 b0115991c18d0878e7270a042592e76f 426 PRINTS PR00143 Citrate synthase signature 167 180 6.6E-48 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 SMGD1_RS06240 b0115991c18d0878e7270a042592e76f 426 PRINTS PR00143 Citrate synthase signature 298 318 6.6E-48 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 SMGD1_RS06240 b0115991c18d0878e7270a042592e76f 426 PRINTS PR00143 Citrate synthase signature 221 236 6.6E-48 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 SMGD1_RS06240 b0115991c18d0878e7270a042592e76f 426 PRINTS PR00143 Citrate synthase signature 361 377 6.6E-48 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 SMGD1_RS06240 b0115991c18d0878e7270a042592e76f 426 PRINTS PR00143 Citrate synthase signature 381 395 6.6E-48 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 SMGD1_RS06240 b0115991c18d0878e7270a042592e76f 426 Gene3D G3DSA:1.10.580.10 54 282 2.1E-88 T 22-04-2016 IPR016142 Citrate synthase-like, large alpha subdomain UniPathway: UPA00223 SMGD1_RS06240 b0115991c18d0878e7270a042592e76f 426 ProSitePatterns PS00480 Citrate synthase signature. 305 317 - T 22-04-2016 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 UniPathway: UPA00223 SMGD1_RS06240 b0115991c18d0878e7270a042592e76f 426 Pfam PF00285 Citrate synthase, C-terminal domain 48 413 1.6E-123 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 SMGD1_RS06240 b0115991c18d0878e7270a042592e76f 426 Gene3D G3DSA:1.10.230.10 283 375 7.5E-36 T 22-04-2016 IPR016143 Citrate synthase-like, small alpha subdomain SMGD1_RS06240 b0115991c18d0878e7270a042592e76f 426 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 15 422 1.5E-173 T 22-04-2016 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 UniPathway: UPA00223 SMGD1_RS06240 b0115991c18d0878e7270a042592e76f 426 PANTHER PTHR11739 3 422 4.5E-164 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 SMGD1_RS00890 c8f0453495d37bafcc3aae4aa884c83d 249 Pfam PF00072 Response regulator receiver domain 16 131 3.0E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS00890 c8f0453495d37bafcc3aae4aa884c83d 249 SMART SM00448 14 131 1.0E-21 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS00890 c8f0453495d37bafcc3aae4aa884c83d 249 SMART SM00862 172 243 4.2E-4 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMGD1_RS00890 c8f0453495d37bafcc3aae4aa884c83d 249 PANTHER PTHR26402 14 245 1.2E-27 T 22-04-2016 SMGD1_RS00890 c8f0453495d37bafcc3aae4aa884c83d 249 SUPERFAMILY SSF46894 150 244 7.37E-13 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SMGD1_RS00890 c8f0453495d37bafcc3aae4aa884c83d 249 Gene3D G3DSA:1.10.10.10 152 243 6.3E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMGD1_RS00890 c8f0453495d37bafcc3aae4aa884c83d 249 SUPERFAMILY SSF52172 12 179 4.84E-28 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS00890 c8f0453495d37bafcc3aae4aa884c83d 249 Pfam PF00486 Transcriptional regulatory protein, C terminal 175 243 7.0E-7 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMGD1_RS00890 c8f0453495d37bafcc3aae4aa884c83d 249 Gene3D G3DSA:3.40.50.2300 11 140 1.3E-28 T 22-04-2016 SMGD1_RS05460 ff574611645e21349ec1d1814957699b 389 Pfam PF02321 Outer membrane efflux protein 20 198 1.0E-17 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SMGD1_RS05460 ff574611645e21349ec1d1814957699b 389 Pfam PF02321 Outer membrane efflux protein 221 384 9.8E-5 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SMGD1_RS05460 ff574611645e21349ec1d1814957699b 389 SUPERFAMILY SSF56954 4 385 7.98E-32 T 22-04-2016 SMGD1_RS05460 ff574611645e21349ec1d1814957699b 389 Gene3D G3DSA:1.20.1600.10 19 385 8.2E-21 T 22-04-2016 SMGD1_RS04315 e5f049d5c1c73174b583285ab263d448 332 PANTHER PTHR31377:SF0 4 324 1.5E-96 T 22-04-2016 SMGD1_RS04315 e5f049d5c1c73174b583285ab263d448 332 PANTHER PTHR31377 4 324 1.5E-96 T 22-04-2016 SMGD1_RS04315 e5f049d5c1c73174b583285ab263d448 332 SUPERFAMILY SSF55909 2 325 9.28E-106 T 22-04-2016 SMGD1_RS04315 e5f049d5c1c73174b583285ab263d448 332 Gene3D G3DSA:3.75.10.10 2 327 2.1E-114 T 22-04-2016 SMGD1_RS04315 e5f049d5c1c73174b583285ab263d448 332 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 4 324 6.1E-103 T 22-04-2016 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 SMGD1_RS11780 787681b6422021b89abf60039978132d 372 Gene3D G3DSA:3.30.1330.20 221 326 5.8E-40 T 22-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain SMGD1_RS11780 787681b6422021b89abf60039978132d 372 PANTHER PTHR30314:SF3 7 325 3.6E-138 T 22-04-2016 SMGD1_RS11780 787681b6422021b89abf60039978132d 372 SUPERFAMILY SSF55307 211 326 1.42E-38 T 22-04-2016 IPR008280 Tubulin/FtsZ, C-terminal SMGD1_RS11780 787681b6422021b89abf60039978132d 372 SMART SM00864 16 208 5.5E-94 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 SMGD1_RS11780 787681b6422021b89abf60039978132d 372 ProSitePatterns PS01135 FtsZ protein signature 2. 100 121 - T 22-04-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 SMGD1_RS11780 787681b6422021b89abf60039978132d 372 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 9 332 4.4E-114 T 22-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 SMGD1_RS11780 787681b6422021b89abf60039978132d 372 SMART SM00865 212 331 4.1E-46 T 22-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain SMGD1_RS11780 787681b6422021b89abf60039978132d 372 Pfam PF12327 FtsZ family, C-terminal domain 227 323 2.4E-24 T 22-04-2016 IPR024757 Cell division protein FtsZ, C-terminal SMGD1_RS11780 787681b6422021b89abf60039978132d 372 PRINTS PR00423 Cell division protein FtsZ signature 129 150 2.7E-38 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 SMGD1_RS11780 787681b6422021b89abf60039978132d 372 PRINTS PR00423 Cell division protein FtsZ signature 192 214 2.7E-38 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 SMGD1_RS11780 787681b6422021b89abf60039978132d 372 PRINTS PR00423 Cell division protein FtsZ signature 217 238 2.7E-38 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 SMGD1_RS11780 787681b6422021b89abf60039978132d 372 PRINTS PR00423 Cell division protein FtsZ signature 101 121 2.7E-38 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 SMGD1_RS11780 787681b6422021b89abf60039978132d 372 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 12 329 34.699 T 22-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 SMGD1_RS11780 787681b6422021b89abf60039978132d 372 SUPERFAMILY SSF52490 16 208 5.63E-62 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 SMGD1_RS11780 787681b6422021b89abf60039978132d 372 PANTHER PTHR30314 7 325 3.6E-138 T 22-04-2016 SMGD1_RS11780 787681b6422021b89abf60039978132d 372 Gene3D G3DSA:3.40.50.1440 16 220 2.0E-80 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 SMGD1_RS11780 787681b6422021b89abf60039978132d 372 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 16 176 2.9E-39 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 SMGD1_RS14365 1d8d3158ef1bbfcc7a61f24720dbd7b0 521 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 138 261 1.7E-11 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS14365 1d8d3158ef1bbfcc7a61f24720dbd7b0 521 Pfam PF00563 EAL domain 289 516 1.8E-61 T 22-04-2016 IPR001633 EAL domain SMGD1_RS14365 1d8d3158ef1bbfcc7a61f24720dbd7b0 521 Gene3D G3DSA:3.30.70.270 125 274 1.5E-15 T 22-04-2016 SMGD1_RS14365 1d8d3158ef1bbfcc7a61f24720dbd7b0 521 Pfam PF00990 Diguanylate cyclase, GGDEF domain 132 263 6.3E-12 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS14365 1d8d3158ef1bbfcc7a61f24720dbd7b0 521 PANTHER PTHR33121:SF10 131 210 4.6E-49 T 22-04-2016 SMGD1_RS14365 1d8d3158ef1bbfcc7a61f24720dbd7b0 521 PANTHER PTHR33121:SF10 241 516 4.6E-49 T 22-04-2016 SMGD1_RS14365 1d8d3158ef1bbfcc7a61f24720dbd7b0 521 SMART SM00052 282 521 9.6E-49 T 22-04-2016 IPR001633 EAL domain SMGD1_RS14365 1d8d3158ef1bbfcc7a61f24720dbd7b0 521 SUPERFAMILY SSF141868 289 516 9.81E-64 T 22-04-2016 IPR001633 EAL domain SMGD1_RS14365 1d8d3158ef1bbfcc7a61f24720dbd7b0 521 PANTHER PTHR33121 131 210 4.6E-49 T 22-04-2016 SMGD1_RS14365 1d8d3158ef1bbfcc7a61f24720dbd7b0 521 PANTHER PTHR33121 241 516 4.6E-49 T 22-04-2016 SMGD1_RS14365 1d8d3158ef1bbfcc7a61f24720dbd7b0 521 SMART SM00267 112 270 9.1E-6 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS14365 1d8d3158ef1bbfcc7a61f24720dbd7b0 521 SUPERFAMILY SSF55073 128 264 1.73E-15 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS14365 1d8d3158ef1bbfcc7a61f24720dbd7b0 521 Gene3D G3DSA:3.20.20.450 287 516 8.3E-64 T 22-04-2016 IPR001633 EAL domain SMGD1_RS11285 6749fdba22b83832eba770f9dedb32f4 380 PIRSF PIRSF005622 6 380 2.0E-156 T 22-04-2016 IPR002780 Hydrogenase formation HypD protein GO:0046872 SMGD1_RS11285 6749fdba22b83832eba770f9dedb32f4 380 PANTHER PTHR30149:SF0 7 380 5.4E-191 T 22-04-2016 SMGD1_RS11285 6749fdba22b83832eba770f9dedb32f4 380 Pfam PF01924 Hydrogenase formation hypA family 18 377 2.0E-147 T 22-04-2016 IPR002780 Hydrogenase formation HypD protein GO:0046872 SMGD1_RS11285 6749fdba22b83832eba770f9dedb32f4 380 TIGRFAM TIGR00075 hypD: hydrogenase expression/formation protein HypD 7 378 6.9E-149 T 22-04-2016 IPR002780 Hydrogenase formation HypD protein GO:0046872 SMGD1_RS11285 6749fdba22b83832eba770f9dedb32f4 380 PANTHER PTHR30149 7 380 5.4E-191 T 22-04-2016 SMGD1_RS01105 b25933365862177a542516c8a04d8023 165 PANTHER PTHR26402 16 140 2.2E-35 T 22-04-2016 SMGD1_RS01105 b25933365862177a542516c8a04d8023 165 SUPERFAMILY SSF52172 14 146 1.35E-33 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS01105 b25933365862177a542516c8a04d8023 165 SMART SM00448 16 129 5.9E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS01105 b25933365862177a542516c8a04d8023 165 Pfam PF00072 Response regulator receiver domain 18 129 4.0E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS01105 b25933365862177a542516c8a04d8023 165 Gene3D G3DSA:3.40.50.2300 14 154 2.4E-34 T 22-04-2016 SMGD1_RS05870 582ce71dc4990665c34d4bc40d197b14 137 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 19 111 2.2E-9 T 22-04-2016 IPR000014 PAS domain SMGD1_RS05870 582ce71dc4990665c34d4bc40d197b14 137 Gene3D G3DSA:3.30.450.20 22 112 4.1E-18 T 22-04-2016 SMGD1_RS05870 582ce71dc4990665c34d4bc40d197b14 137 SUPERFAMILY SSF55785 21 112 2.09E-23 T 22-04-2016 IPR000014 PAS domain SMGD1_RS05870 582ce71dc4990665c34d4bc40d197b14 137 PANTHER PTHR32089:SF52 1 131 1.2E-18 T 22-04-2016 SMGD1_RS05870 582ce71dc4990665c34d4bc40d197b14 137 Pfam PF08447 PAS fold 30 110 1.8E-11 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 SMGD1_RS05870 582ce71dc4990665c34d4bc40d197b14 137 PANTHER PTHR32089 1 131 1.2E-18 T 22-04-2016 SMGD1_RS03300 b7e326aa2d62a532c685467b9c4ba07e 353 PANTHER PTHR22926:SF5 2 353 3.1E-121 T 22-04-2016 SMGD1_RS03300 b7e326aa2d62a532c685467b9c4ba07e 353 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 32 353 2.6E-119 T 22-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SMGD1_RS03300 b7e326aa2d62a532c685467b9c4ba07e 353 Pfam PF00953 Glycosyl transferase family 4 94 277 5.3E-36 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SMGD1_RS03300 b7e326aa2d62a532c685467b9c4ba07e 353 ProSitePatterns PS01347 MraY family signature 1. 63 75 - T 22-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SMGD1_RS03300 b7e326aa2d62a532c685467b9c4ba07e 353 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 63 75 2.4E-5 T 22-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SMGD1_RS03300 b7e326aa2d62a532c685467b9c4ba07e 353 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 20 351 22.766 T 22-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SMGD1_RS03300 b7e326aa2d62a532c685467b9c4ba07e 353 PANTHER PTHR22926 2 353 3.1E-121 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SMGD1_RS03300 b7e326aa2d62a532c685467b9c4ba07e 353 ProSitePatterns PS01348 MraY family signature 2. 183 194 - T 22-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SMGD1_RS09910 0a6fba8a0517cadf7bb2f777556367fe 654 Gene3D G3DSA:3.20.20.450 419 650 3.1E-67 T 22-04-2016 IPR001633 EAL domain SMGD1_RS09910 0a6fba8a0517cadf7bb2f777556367fe 654 SUPERFAMILY SSF141868 421 649 1.83E-65 T 22-04-2016 IPR001633 EAL domain SMGD1_RS09910 0a6fba8a0517cadf7bb2f777556367fe 654 SMART SM00304 202 256 5.3E-6 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SMGD1_RS09910 0a6fba8a0517cadf7bb2f777556367fe 654 SUPERFAMILY SSF55073 260 402 6.04E-26 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS09910 0a6fba8a0517cadf7bb2f777556367fe 654 SMART SM00052 415 654 3.1E-58 T 22-04-2016 IPR001633 EAL domain SMGD1_RS09910 0a6fba8a0517cadf7bb2f777556367fe 654 Gene3D G3DSA:3.30.70.270 256 408 4.4E-29 T 22-04-2016 SMGD1_RS09910 0a6fba8a0517cadf7bb2f777556367fe 654 PANTHER PTHR33121:SF10 367 654 2.9E-42 T 22-04-2016 SMGD1_RS09910 0a6fba8a0517cadf7bb2f777556367fe 654 PANTHER PTHR33121:SF10 15 35 2.9E-42 T 22-04-2016 SMGD1_RS09910 0a6fba8a0517cadf7bb2f777556367fe 654 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 251 401 2.3E-20 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS09910 0a6fba8a0517cadf7bb2f777556367fe 654 PANTHER PTHR33121 367 654 2.9E-42 T 22-04-2016 SMGD1_RS09910 0a6fba8a0517cadf7bb2f777556367fe 654 PANTHER PTHR33121 15 35 2.9E-42 T 22-04-2016 SMGD1_RS09910 0a6fba8a0517cadf7bb2f777556367fe 654 Pfam PF00563 EAL domain 422 649 1.1E-61 T 22-04-2016 IPR001633 EAL domain SMGD1_RS09910 0a6fba8a0517cadf7bb2f777556367fe 654 SMART SM00267 244 403 8.6E-21 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS09910 0a6fba8a0517cadf7bb2f777556367fe 654 Pfam PF00990 Diguanylate cyclase, GGDEF domain 256 398 9.4E-24 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS13420 709f6e28d399e63d66a1c09cd071c252 330 SUPERFAMILY SSF63418 23 86 4.84E-5 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 SMGD1_RS09125 8f64fe1199f185b7719408845b5c2318 370 SUPERFAMILY SSF55874 219 365 5.63E-27 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS09125 8f64fe1199f185b7719408845b5c2318 370 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 5 126 9.0E-23 T 22-04-2016 IPR000014 PAS domain SMGD1_RS09125 8f64fe1199f185b7719408845b5c2318 370 SUPERFAMILY SSF55785 9 121 1.57E-24 T 22-04-2016 IPR000014 PAS domain SMGD1_RS09125 8f64fe1199f185b7719408845b5c2318 370 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 265 365 9.5E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS09125 8f64fe1199f185b7719408845b5c2318 370 SMART SM00086 77 119 3.6E-5 T 22-04-2016 IPR001610 PAC motif SMGD1_RS09125 8f64fe1199f185b7719408845b5c2318 370 SUPERFAMILY SSF47384 130 219 1.8E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS09125 8f64fe1199f185b7719408845b5c2318 370 Gene3D G3DSA:3.30.450.20 5 157 2.9E-24 T 22-04-2016 SMGD1_RS09125 8f64fe1199f185b7719408845b5c2318 370 PANTHER PTHR24423 5 365 1.5E-54 T 22-04-2016 SMGD1_RS09125 8f64fe1199f185b7719408845b5c2318 370 SMART SM00387 261 369 5.9E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS09125 8f64fe1199f185b7719408845b5c2318 370 PRINTS PR00344 Bacterial sensor protein C-terminal signature 298 312 3.6E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS09125 8f64fe1199f185b7719408845b5c2318 370 PRINTS PR00344 Bacterial sensor protein C-terminal signature 316 326 3.6E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS09125 8f64fe1199f185b7719408845b5c2318 370 PRINTS PR00344 Bacterial sensor protein C-terminal signature 329 347 3.6E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS09125 8f64fe1199f185b7719408845b5c2318 370 Gene3D G3DSA:3.30.565.10 225 365 2.4E-27 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS09125 8f64fe1199f185b7719408845b5c2318 370 Pfam PF08448 PAS fold 10 118 6.6E-11 T 22-04-2016 IPR013656 PAS fold-4 SMGD1_RS09125 8f64fe1199f185b7719408845b5c2318 370 SMART SM00091 4 70 1.3E-7 T 22-04-2016 IPR000014 PAS domain SMGD1_RS00105 aac8a41f3fe62585a988a4df99b22f5c 475 Pfam PF14520 Helix-hairpin-helix domain 415 472 1.8E-8 T 22-04-2016 SMGD1_RS00105 aac8a41f3fe62585a988a4df99b22f5c 475 SUPERFAMILY SSF56059 88 263 4.6E-33 T 22-04-2016 SMGD1_RS00105 aac8a41f3fe62585a988a4df99b22f5c 475 Gene3D G3DSA:3.30.1490.20 98 165 1.5E-5 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SMGD1_RS00105 aac8a41f3fe62585a988a4df99b22f5c 475 Gene3D G3DSA:1.10.150.20 417 466 4.6E-6 T 22-04-2016 SMGD1_RS00105 aac8a41f3fe62585a988a4df99b22f5c 475 Pfam PF08443 RimK-like ATP-grasp domain 107 252 8.7E-13 T 22-04-2016 IPR013651 ATP-grasp fold, RimK-type SMGD1_RS00105 aac8a41f3fe62585a988a4df99b22f5c 475 SMART SM00278 450 469 35.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 SMGD1_RS00105 aac8a41f3fe62585a988a4df99b22f5c 475 SMART SM00278 415 434 0.2 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 SMGD1_RS00105 aac8a41f3fe62585a988a4df99b22f5c 475 Gene3D G3DSA:3.30.470.20 166 246 2.0E-10 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SMGD1_RS00105 aac8a41f3fe62585a988a4df99b22f5c 475 PANTHER PTHR21621 107 257 1.3E-19 T 22-04-2016 SMGD1_RS00105 aac8a41f3fe62585a988a4df99b22f5c 475 PANTHER PTHR21621:SF0 107 257 1.3E-19 T 22-04-2016 SMGD1_RS00105 aac8a41f3fe62585a988a4df99b22f5c 475 SUPERFAMILY SSF47781 411 467 1.42E-7 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 SMGD1_RS13970 dc2b53afb868be834ac35b87fec53647 547 Gene3D G3DSA:3.40.50.300 144 324 1.4E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS13970 dc2b53afb868be834ac35b87fec53647 547 PANTHER PTHR23076 80 541 4.0E-140 T 22-04-2016 SMGD1_RS13970 dc2b53afb868be834ac35b87fec53647 547 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 185 314 4.9E-44 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SMGD1_RS13970 dc2b53afb868be834ac35b87fec53647 547 ProSitePatterns PS00674 AAA-protein family signature. 285 303 - T 22-04-2016 IPR003960 ATPase, AAA-type, conserved site GO:0005524 SMGD1_RS13970 dc2b53afb868be834ac35b87fec53647 547 Pfam PF01434 Peptidase family M41 374 491 6.2E-10 T 22-04-2016 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 SMGD1_RS13970 dc2b53afb868be834ac35b87fec53647 547 Gene3D G3DSA:1.10.8.60 325 387 1.9E-17 T 22-04-2016 SMGD1_RS13970 dc2b53afb868be834ac35b87fec53647 547 SMART SM00382 181 317 1.0E-21 T 22-04-2016 IPR003593 AAA+ ATPase domain SMGD1_RS13970 dc2b53afb868be834ac35b87fec53647 547 SUPERFAMILY SSF52540 144 383 2.49E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS13970 dc2b53afb868be834ac35b87fec53647 547 SUPERFAMILY SSF140990 394 543 9.55E-21 T 22-04-2016 SMGD1_RS04990 ca09b35f86d97ec0da9e7de352d93f2f 307 Pfam PF03150 Di-haem cytochrome c peroxidase 32 178 3.1E-44 T 22-04-2016 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 SMGD1_RS04990 ca09b35f86d97ec0da9e7de352d93f2f 307 Gene3D G3DSA:1.10.760.10 171 299 5.3E-42 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS04990 ca09b35f86d97ec0da9e7de352d93f2f 307 PANTHER PTHR30600:SF7 15 306 3.2E-85 T 22-04-2016 SMGD1_RS04990 ca09b35f86d97ec0da9e7de352d93f2f 307 Pfam PF00034 Cytochrome c 187 296 7.3E-10 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS04990 ca09b35f86d97ec0da9e7de352d93f2f 307 Gene3D G3DSA:1.10.760.10 23 170 5.0E-45 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS04990 ca09b35f86d97ec0da9e7de352d93f2f 307 SUPERFAMILY SSF46626 166 299 1.27E-34 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS04990 ca09b35f86d97ec0da9e7de352d93f2f 307 PIRSF PIRSF000294 13 305 7.7E-90 T 22-04-2016 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 SMGD1_RS04990 ca09b35f86d97ec0da9e7de352d93f2f 307 SUPERFAMILY SSF46626 9 167 7.42E-41 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS04990 ca09b35f86d97ec0da9e7de352d93f2f 307 PANTHER PTHR30600 15 306 3.2E-85 T 22-04-2016 SMGD1_RS10390 1a07787908f4c74bc23556dce57322c5 217 Pfam PF00072 Response regulator receiver domain 4 113 1.2E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS10390 1a07787908f4c74bc23556dce57322c5 217 Gene3D G3DSA:3.40.50.2300 3 146 9.8E-37 T 22-04-2016 SMGD1_RS10390 1a07787908f4c74bc23556dce57322c5 217 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 215 6.2E-15 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMGD1_RS10390 1a07787908f4c74bc23556dce57322c5 217 SMART SM00448 2 113 9.6E-34 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS10390 1a07787908f4c74bc23556dce57322c5 217 PANTHER PTHR26402:SF518 2 216 3.8E-56 T 22-04-2016 SMGD1_RS10390 1a07787908f4c74bc23556dce57322c5 217 SMART SM00862 142 215 4.0E-15 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMGD1_RS10390 1a07787908f4c74bc23556dce57322c5 217 PANTHER PTHR26402 2 216 3.8E-56 T 22-04-2016 SMGD1_RS10390 1a07787908f4c74bc23556dce57322c5 217 SUPERFAMILY SSF52172 3 176 1.07E-33 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS10390 1a07787908f4c74bc23556dce57322c5 217 Gene3D G3DSA:1.10.10.10 147 216 2.3E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMGD1_RS09550 a70c2f48d08120fed6dff18287bd92a5 648 ProSitePatterns PS01175 Ribonuclease II family signature. 501 525 - T 22-04-2016 IPR022966 Ribonuclease II/R, conserved site SMGD1_RS09550 a70c2f48d08120fed6dff18287bd92a5 648 Pfam PF00773 RNB domain 213 531 5.7E-87 T 22-04-2016 SMGD1_RS09550 a70c2f48d08120fed6dff18287bd92a5 648 PANTHER PTHR23355:SF9 164 595 1.6E-112 T 22-04-2016 SMGD1_RS09550 a70c2f48d08120fed6dff18287bd92a5 648 SUPERFAMILY SSF50249 176 575 3.37E-106 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMGD1_RS09550 a70c2f48d08120fed6dff18287bd92a5 648 SMART SM00955 213 534 9.7E-121 T 22-04-2016 SMGD1_RS09550 a70c2f48d08120fed6dff18287bd92a5 648 PANTHER PTHR23355 164 595 1.6E-112 T 22-04-2016 SMGD1_RS08900 7d7a813b02d04f7ff8bc7b2bbd89efd9 75 SMART SM00899 2 74 4.5E-12 T 22-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 SMGD1_RS08900 7d7a813b02d04f7ff8bc7b2bbd89efd9 75 Pfam PF04023 FeoA domain 3 73 5.5E-14 T 22-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 SMGD1_RS08900 7d7a813b02d04f7ff8bc7b2bbd89efd9 75 SUPERFAMILY SSF50037 4 74 2.04E-13 T 22-04-2016 IPR008988 Transcriptional repressor, C-terminal SMGD1_RS11430 4faabfdc90e5b2660ef56d644ade996c 184 Pfam PF00691 OmpA family 80 176 3.7E-16 T 22-04-2016 IPR006665 OmpA-like domain SMGD1_RS11430 4faabfdc90e5b2660ef56d644ade996c 184 PANTHER PTHR30128 45 181 1.4E-35 T 22-04-2016 SMGD1_RS11430 4faabfdc90e5b2660ef56d644ade996c 184 SUPERFAMILY SSF103088 77 184 2.62E-29 T 22-04-2016 IPR006665 OmpA-like domain SMGD1_RS11430 4faabfdc90e5b2660ef56d644ade996c 184 PANTHER PTHR30128:SF18 45 181 1.4E-35 T 22-04-2016 SMGD1_RS11430 4faabfdc90e5b2660ef56d644ade996c 184 Gene3D G3DSA:3.30.1330.60 76 183 2.3E-30 T 22-04-2016 IPR006665 OmpA-like domain SMGD1_RS11430 4faabfdc90e5b2660ef56d644ade996c 184 PRINTS PR01021 OMPA domain signature 112 127 4.8E-11 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SMGD1_RS11430 4faabfdc90e5b2660ef56d644ade996c 184 PRINTS PR01021 OMPA domain signature 127 143 4.8E-11 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SMGD1_RS11430 4faabfdc90e5b2660ef56d644ade996c 184 PRINTS PR01021 OMPA domain signature 81 103 4.8E-11 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SMGD1_RS11605 ce53e847f3e81bf8452a5e813aa04dcd 653 PANTHER PTHR23389:SF9 3 520 3.3E-150 T 22-04-2016 SMGD1_RS11605 ce53e847f3e81bf8452a5e813aa04dcd 653 SUPERFAMILY SSF47781 394 561 2.27E-48 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 SMGD1_RS11605 ce53e847f3e81bf8452a5e813aa04dcd 653 Pfam PF14520 Helix-hairpin-helix domain 436 487 3.4E-4 T 22-04-2016 SMGD1_RS11605 ce53e847f3e81bf8452a5e813aa04dcd 653 Gene3D G3DSA:3.40.50.10190 576 649 1.1E-23 T 22-04-2016 IPR001357 BRCT domain SMGD1_RS11605 ce53e847f3e81bf8452a5e813aa04dcd 653 SUPERFAMILY SSF50249 309 391 6.34E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMGD1_RS11605 ce53e847f3e81bf8452a5e813aa04dcd 653 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 576 645 1.6E-12 T 22-04-2016 IPR001357 BRCT domain SMGD1_RS11605 ce53e847f3e81bf8452a5e813aa04dcd 653 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 11 645 4.6E-217 T 22-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 SMGD1_RS11605 ce53e847f3e81bf8452a5e813aa04dcd 653 Gene3D G3DSA:1.10.150.20 423 489 3.9E-23 T 22-04-2016 SMGD1_RS11605 ce53e847f3e81bf8452a5e813aa04dcd 653 SUPERFAMILY SSF52113 576 647 3.78E-19 T 22-04-2016 IPR001357 BRCT domain SMGD1_RS11605 ce53e847f3e81bf8452a5e813aa04dcd 653 PANTHER PTHR23389 3 520 3.3E-150 T 22-04-2016 SMGD1_RS11605 ce53e847f3e81bf8452a5e813aa04dcd 653 PIRSF PIRSF001604 1 653 2.1E-221 T 22-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 SMGD1_RS11605 ce53e847f3e81bf8452a5e813aa04dcd 653 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 312 388 1.6E-30 T 22-04-2016 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 SMGD1_RS11605 ce53e847f3e81bf8452a5e813aa04dcd 653 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 6 307 1.9E-103 T 22-04-2016 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 SMGD1_RS11605 ce53e847f3e81bf8452a5e813aa04dcd 653 Gene3D G3DSA:1.10.287.610 5 65 9.3E-14 T 22-04-2016 SMGD1_RS11605 ce53e847f3e81bf8452a5e813aa04dcd 653 Hamap MF_01588 DNA ligase [ligA]. 4 649 46.073 T 22-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 SMGD1_RS11605 ce53e847f3e81bf8452a5e813aa04dcd 653 SMART SM00532 1 435 6.6E-212 T 22-04-2016 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 SMGD1_RS11605 ce53e847f3e81bf8452a5e813aa04dcd 653 Gene3D G3DSA:3.30.470.30 115 241 1.1E-44 T 22-04-2016 SMGD1_RS11605 ce53e847f3e81bf8452a5e813aa04dcd 653 Pfam PF12826 Helix-hairpin-helix motif 497 551 1.5E-11 T 22-04-2016 SMGD1_RS11605 ce53e847f3e81bf8452a5e813aa04dcd 653 Gene3D G3DSA:1.10.150.20 493 561 1.7E-14 T 22-04-2016 SMGD1_RS11605 ce53e847f3e81bf8452a5e813aa04dcd 653 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 110 139 - T 22-04-2016 IPR018239 NAD-dependent DNA ligase, active site SMGD1_RS11605 ce53e847f3e81bf8452a5e813aa04dcd 653 Gene3D G3DSA:2.40.50.140 309 380 1.7E-29 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMGD1_RS11605 ce53e847f3e81bf8452a5e813aa04dcd 653 SMART SM00278 529 548 1.7 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 SMGD1_RS11605 ce53e847f3e81bf8452a5e813aa04dcd 653 SMART SM00278 467 486 39.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 SMGD1_RS11605 ce53e847f3e81bf8452a5e813aa04dcd 653 SMART SM00278 433 452 270.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 SMGD1_RS11605 ce53e847f3e81bf8452a5e813aa04dcd 653 SMART SM00292 576 652 3.3E-11 T 22-04-2016 IPR001357 BRCT domain SMGD1_RS11605 ce53e847f3e81bf8452a5e813aa04dcd 653 SUPERFAMILY SSF56091 5 307 1.31E-100 T 22-04-2016 SMGD1_RS08230 378a455cfad70e25c6282746bfeeb948 166 Pfam PF00731 AIR carboxylase 4 149 1.8E-55 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 SMGD1_RS08230 378a455cfad70e25c6282746bfeeb948 166 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 4 157 4.9E-56 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 SMGD1_RS08230 378a455cfad70e25c6282746bfeeb948 166 PANTHER PTHR23046:SF2 4 166 3.7E-64 T 22-04-2016 SMGD1_RS08230 378a455cfad70e25c6282746bfeeb948 166 PANTHER PTHR23046 4 166 3.7E-64 T 22-04-2016 SMGD1_RS08230 378a455cfad70e25c6282746bfeeb948 166 Gene3D G3DSA:3.40.50.7700 4 160 1.0E-61 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 SMGD1_RS08230 378a455cfad70e25c6282746bfeeb948 166 SMART SM01001 2 153 9.0E-87 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 SMGD1_RS08230 378a455cfad70e25c6282746bfeeb948 166 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 4 157 29.516 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 SMGD1_RS08230 378a455cfad70e25c6282746bfeeb948 166 SUPERFAMILY SSF52255 3 160 6.67E-58 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 SMGD1_RS08230 378a455cfad70e25c6282746bfeeb948 166 PIRSF PIRSF001338 1 164 2.5E-61 T 22-04-2016 IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE GO:0006189|GO:0034023 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234|UniPathway: UPA00074 SMGD1_RS07725 c18b35a144a807077de2f30a20b513d6 314 Pfam PF02167 Cytochrome C1 family 264 312 4.9E-5 T 22-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 SMGD1_RS07725 c18b35a144a807077de2f30a20b513d6 314 SUPERFAMILY SSF46626 30 161 1.52E-18 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS07725 c18b35a144a807077de2f30a20b513d6 314 Gene3D G3DSA:1.20.5.100 283 314 4.2E-8 T 22-04-2016 SMGD1_RS07725 c18b35a144a807077de2f30a20b513d6 314 SUPERFAMILY SSF46626 173 299 3.18E-15 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS07725 c18b35a144a807077de2f30a20b513d6 314 Pfam PF00034 Cytochrome c 54 160 1.1E-14 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS07725 c18b35a144a807077de2f30a20b513d6 314 Gene3D G3DSA:1.10.760.10 35 160 1.1E-13 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS07725 c18b35a144a807077de2f30a20b513d6 314 Gene3D G3DSA:1.10.760.10 172 275 1.9E-10 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS08430 8d360d165b2e18c58e98f81fed8a1bd4 682 PANTHER PTHR11615 5 292 2.3E-58 T 22-04-2016 SMGD1_RS08430 8d360d165b2e18c58e98f81fed8a1bd4 682 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 83 121 4.3E-15 T 22-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 SMGD1_RS08430 8d360d165b2e18c58e98f81fed8a1bd4 682 SUPERFAMILY SSF54292 4 74 1.23E-14 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 SMGD1_RS08430 8d360d165b2e18c58e98f81fed8a1bd4 682 SMART SM00926 238 295 2.9E-6 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 SMGD1_RS08430 8d360d165b2e18c58e98f81fed8a1bd4 682 Gene3D G3DSA:2.20.25.90 247 294 2.3E-6 T 22-04-2016 SMGD1_RS08430 8d360d165b2e18c58e98f81fed8a1bd4 682 Pfam PF12838 4Fe-4S dicluster domain 145 223 1.6E-8 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SMGD1_RS08430 8d360d165b2e18c58e98f81fed8a1bd4 682 Gene3D G3DSA:3.10.20.30 3 76 1.6E-7 T 22-04-2016 IPR012675 Beta-grasp domain SMGD1_RS08430 8d360d165b2e18c58e98f81fed8a1bd4 682 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 3 76 2.1E-14 T 22-04-2016 SMGD1_RS08430 8d360d165b2e18c58e98f81fed8a1bd4 682 Gene3D G3DSA:3.30.70.20 217 246 6.4E-4 T 22-04-2016 SMGD1_RS08430 8d360d165b2e18c58e98f81fed8a1bd4 682 SUPERFAMILY SSF53706 236 447 3.45E-23 T 22-04-2016 SMGD1_RS08430 8d360d165b2e18c58e98f81fed8a1bd4 682 SUPERFAMILY SSF53706 528 665 3.45E-23 T 22-04-2016 SMGD1_RS08430 8d360d165b2e18c58e98f81fed8a1bd4 682 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 209 220 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SMGD1_RS08430 8d360d165b2e18c58e98f81fed8a1bd4 682 SMART SM00929 83 123 6.1E-18 T 22-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 SMGD1_RS08430 8d360d165b2e18c58e98f81fed8a1bd4 682 PANTHER PTHR11615:SF38 5 292 2.3E-58 T 22-04-2016 SMGD1_RS08430 8d360d165b2e18c58e98f81fed8a1bd4 682 Gene3D G3DSA:3.30.70.20 132 216 6.3E-10 T 22-04-2016 SMGD1_RS08430 8d360d165b2e18c58e98f81fed8a1bd4 682 SUPERFAMILY SSF54862 76 231 1.46E-28 T 22-04-2016 SMGD1_RS05765 daef6860d23d9e64234208b8e2bdae25 407 Gene3D G3DSA:4.10.1080.10 201 284 3.3E-10 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 SMGD1_RS05765 daef6860d23d9e64234208b8e2bdae25 407 Pfam PF13505 Outer membrane protein beta-barrel domain 10 173 2.7E-8 T 22-04-2016 IPR027385 Outer membrane protein beta-barrel SMGD1_RS05765 daef6860d23d9e64234208b8e2bdae25 407 SUPERFAMILY SSF103647 227 295 3.6E-11 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 SMGD1_RS05765 daef6860d23d9e64234208b8e2bdae25 407 Pfam PF02412 Thrombospondin type 3 repeat 230 252 0.0092 T 22-04-2016 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: REACT_16888 SMGD1_RS05765 daef6860d23d9e64234208b8e2bdae25 407 Pfam PF02412 Thrombospondin type 3 repeat 262 284 0.0012 T 22-04-2016 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: REACT_16888 SMGD1_RS05765 daef6860d23d9e64234208b8e2bdae25 407 Pfam PF02412 Thrombospondin type 3 repeat 201 220 8.2E-4 T 22-04-2016 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: REACT_16888 SMGD1_RS05765 daef6860d23d9e64234208b8e2bdae25 407 PANTHER PTHR30128 202 404 2.0E-47 T 22-04-2016 SMGD1_RS05765 daef6860d23d9e64234208b8e2bdae25 407 PRINTS PR01021 OMPA domain signature 334 349 1.0E-9 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SMGD1_RS05765 daef6860d23d9e64234208b8e2bdae25 407 PRINTS PR01021 OMPA domain signature 304 326 1.0E-9 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SMGD1_RS05765 daef6860d23d9e64234208b8e2bdae25 407 PRINTS PR01021 OMPA domain signature 349 365 1.0E-9 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SMGD1_RS05765 daef6860d23d9e64234208b8e2bdae25 407 Gene3D G3DSA:3.30.1330.60 297 405 9.8E-37 T 22-04-2016 IPR006665 OmpA-like domain SMGD1_RS05765 daef6860d23d9e64234208b8e2bdae25 407 PANTHER PTHR30128:SF10 202 404 2.0E-47 T 22-04-2016 SMGD1_RS05765 daef6860d23d9e64234208b8e2bdae25 407 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 387 407 3.1E-7 T 22-04-2016 SMGD1_RS05765 daef6860d23d9e64234208b8e2bdae25 407 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 367 386 3.1E-7 T 22-04-2016 SMGD1_RS05765 daef6860d23d9e64234208b8e2bdae25 407 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 349 366 3.1E-7 T 22-04-2016 SMGD1_RS05765 daef6860d23d9e64234208b8e2bdae25 407 Pfam PF00691 OmpA family 304 398 1.4E-23 T 22-04-2016 IPR006665 OmpA-like domain SMGD1_RS05765 daef6860d23d9e64234208b8e2bdae25 407 SUPERFAMILY SSF56925 22 180 1.6E-14 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 SMGD1_RS05765 daef6860d23d9e64234208b8e2bdae25 407 SUPERFAMILY SSF103088 297 403 7.72E-35 T 22-04-2016 IPR006665 OmpA-like domain SMGD1_RS05765 daef6860d23d9e64234208b8e2bdae25 407 Gene3D G3DSA:2.40.160.20 33 199 1.2E-13 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 SMGD1_RS05765 daef6860d23d9e64234208b8e2bdae25 407 ProSitePatterns PS01068 OmpA-like domain. 336 380 - T 22-04-2016 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 SMGD1_RS00675 09ea548476673369dee356c172d0aa1c 552 SUPERFAMILY SSF50249 265 360 2.69E-23 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMGD1_RS00675 09ea548476673369dee356c172d0aa1c 552 SMART SM00316 369 439 1.2E-22 T 22-04-2016 IPR022967 RNA-binding domain, S1 SMGD1_RS00675 09ea548476673369dee356c172d0aa1c 552 SMART SM00316 26 96 0.11 T 22-04-2016 IPR022967 RNA-binding domain, S1 SMGD1_RS00675 09ea548476673369dee356c172d0aa1c 552 SMART SM00316 282 354 2.6E-24 T 22-04-2016 IPR022967 RNA-binding domain, S1 SMGD1_RS00675 09ea548476673369dee356c172d0aa1c 552 SMART SM00316 197 267 5.8E-20 T 22-04-2016 IPR022967 RNA-binding domain, S1 SMGD1_RS00675 09ea548476673369dee356c172d0aa1c 552 SMART SM00316 113 178 0.07 T 22-04-2016 IPR022967 RNA-binding domain, S1 SMGD1_RS00675 09ea548476673369dee356c172d0aa1c 552 SMART SM00316 454 521 3.2E-12 T 22-04-2016 IPR022967 RNA-binding domain, S1 SMGD1_RS00675 09ea548476673369dee356c172d0aa1c 552 SUPERFAMILY SSF50249 113 182 7.46E-10 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMGD1_RS00675 09ea548476673369dee356c172d0aa1c 552 Gene3D G3DSA:2.40.50.140 283 363 2.0E-26 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMGD1_RS00675 09ea548476673369dee356c172d0aa1c 552 SUPERFAMILY SSF50249 23 112 4.95E-8 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMGD1_RS00675 09ea548476673369dee356c172d0aa1c 552 Pfam PF00575 S1 RNA binding domain 369 439 5.3E-19 T 22-04-2016 IPR003029 S1 domain GO:0003676 SMGD1_RS00675 09ea548476673369dee356c172d0aa1c 552 Pfam PF00575 S1 RNA binding domain 112 178 6.9E-5 T 22-04-2016 IPR003029 S1 domain GO:0003676 SMGD1_RS00675 09ea548476673369dee356c172d0aa1c 552 Pfam PF00575 S1 RNA binding domain 199 267 1.8E-14 T 22-04-2016 IPR003029 S1 domain GO:0003676 SMGD1_RS00675 09ea548476673369dee356c172d0aa1c 552 Pfam PF00575 S1 RNA binding domain 453 521 2.4E-7 T 22-04-2016 IPR003029 S1 domain GO:0003676 SMGD1_RS00675 09ea548476673369dee356c172d0aa1c 552 Pfam PF00575 S1 RNA binding domain 282 354 6.6E-19 T 22-04-2016 IPR003029 S1 domain GO:0003676 SMGD1_RS00675 09ea548476673369dee356c172d0aa1c 552 PRINTS PR00681 Ribosomal protein S1 signature 162 182 3.6E-27 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 SMGD1_RS00675 09ea548476673369dee356c172d0aa1c 552 PRINTS PR00681 Ribosomal protein S1 signature 219 240 3.6E-27 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 SMGD1_RS00675 09ea548476673369dee356c172d0aa1c 552 PRINTS PR00681 Ribosomal protein S1 signature 28 46 3.6E-27 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 SMGD1_RS00675 09ea548476673369dee356c172d0aa1c 552 PRINTS PR00681 Ribosomal protein S1 signature 297 316 3.6E-27 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 SMGD1_RS00675 09ea548476673369dee356c172d0aa1c 552 PRINTS PR00681 Ribosomal protein S1 signature 337 355 3.6E-27 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 SMGD1_RS00675 09ea548476673369dee356c172d0aa1c 552 PRINTS PR00681 Ribosomal protein S1 signature 118 134 3.6E-27 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 SMGD1_RS00675 09ea548476673369dee356c172d0aa1c 552 PANTHER PTHR10724 11 515 3.9E-121 T 22-04-2016 SMGD1_RS00675 09ea548476673369dee356c172d0aa1c 552 Gene3D G3DSA:2.40.50.140 364 440 1.6E-24 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMGD1_RS00675 09ea548476673369dee356c172d0aa1c 552 Gene3D G3DSA:2.40.50.140 117 180 9.8E-7 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMGD1_RS00675 09ea548476673369dee356c172d0aa1c 552 SUPERFAMILY SSF50249 369 450 3.88E-21 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMGD1_RS00675 09ea548476673369dee356c172d0aa1c 552 PANTHER PTHR10724:SF6 11 515 3.9E-121 T 22-04-2016 SMGD1_RS00675 09ea548476673369dee356c172d0aa1c 552 SUPERFAMILY SSF50249 199 280 5.08E-21 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMGD1_RS00675 09ea548476673369dee356c172d0aa1c 552 Gene3D G3DSA:2.40.50.140 443 523 1.5E-13 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMGD1_RS00675 09ea548476673369dee356c172d0aa1c 552 Gene3D G3DSA:2.40.50.140 15 92 6.4E-7 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMGD1_RS00675 09ea548476673369dee356c172d0aa1c 552 SUPERFAMILY SSF50249 434 537 2.83E-15 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMGD1_RS00675 09ea548476673369dee356c172d0aa1c 552 Gene3D G3DSA:2.40.50.140 201 282 9.2E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMGD1_RS00460 b4cfa1d7ae3c4ac80aed5afd47997cfa 229 PANTHER PTHR30028:SF0 1 228 4.1E-56 T 22-04-2016 IPR005226 UPF0014 family SMGD1_RS00460 b4cfa1d7ae3c4ac80aed5afd47997cfa 229 PANTHER PTHR30028 1 228 4.1E-56 T 22-04-2016 SMGD1_RS00460 b4cfa1d7ae3c4ac80aed5afd47997cfa 229 Pfam PF03649 Uncharacterised protein family (UPF0014) 11 228 2.0E-57 T 22-04-2016 IPR005226 UPF0014 family SMGD1_RS11785 01325e821cf9a10214a2474ed7ef7d25 452 SUPERFAMILY SSF53067 4 193 1.24E-49 T 22-04-2016 SMGD1_RS11785 01325e821cf9a10214a2474ed7ef7d25 452 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 5 373 6.9E-126 T 22-04-2016 IPR020823 Cell division protein FtsA GO:0007049 SMGD1_RS11785 01325e821cf9a10214a2474ed7ef7d25 452 Hamap MF_02033 Cell division protein FtsA [ftsA]. 1 452 27.069 T 22-04-2016 IPR020823 Cell division protein FtsA GO:0007049 SMGD1_RS11785 01325e821cf9a10214a2474ed7ef7d25 452 Gene3D G3DSA:3.30.420.40 3 78 4.5E-22 T 22-04-2016 SMGD1_RS11785 01325e821cf9a10214a2474ed7ef7d25 452 Gene3D G3DSA:3.30.420.40 153 204 4.5E-22 T 22-04-2016 SMGD1_RS11785 01325e821cf9a10214a2474ed7ef7d25 452 PANTHER PTHR32432:SF4 2 375 5.3E-101 T 22-04-2016 SMGD1_RS11785 01325e821cf9a10214a2474ed7ef7d25 452 SUPERFAMILY SSF53067 196 373 8.64E-33 T 22-04-2016 SMGD1_RS11785 01325e821cf9a10214a2474ed7ef7d25 452 SMART SM00842 5 192 1.8E-83 T 22-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 SMGD1_RS11785 01325e821cf9a10214a2474ed7ef7d25 452 Gene3D G3DSA:3.30.420.40 292 345 1.0E-19 T 22-04-2016 SMGD1_RS11785 01325e821cf9a10214a2474ed7ef7d25 452 Gene3D G3DSA:3.30.420.40 205 230 1.0E-19 T 22-04-2016 SMGD1_RS11785 01325e821cf9a10214a2474ed7ef7d25 452 PANTHER PTHR32432 2 375 5.3E-101 T 22-04-2016 SMGD1_RS11785 01325e821cf9a10214a2474ed7ef7d25 452 Gene3D G3DSA:3.30.1490.110 92 152 3.5E-15 T 22-04-2016 SMGD1_RS11785 01325e821cf9a10214a2474ed7ef7d25 452 Pfam PF14450 Cell division protein FtsA 7 191 1.2E-9 T 22-04-2016 SMGD1_RS11785 01325e821cf9a10214a2474ed7ef7d25 452 Pfam PF14450 Cell division protein FtsA 203 369 3.5E-16 T 22-04-2016 SMGD1_RS11785 01325e821cf9a10214a2474ed7ef7d25 452 Gene3D G3DSA:3.90.640.10 231 291 4.5E-11 T 22-04-2016 SMGD1_RS11785 01325e821cf9a10214a2474ed7ef7d25 452 PIRSF PIRSF003101 1 452 3.1E-109 T 22-04-2016 IPR020823 Cell division protein FtsA GO:0007049 SMGD1_RS11785 01325e821cf9a10214a2474ed7ef7d25 452 Pfam PF02491 SHS2 domain inserted in FTSA 80 158 4.3E-24 T 22-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 SMGD1_RS04525 8fca10f35f6dc5edd4ec0e9fc7af70fc 681 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 433 609 7.9E-37 T 22-04-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 SMGD1_RS04525 8fca10f35f6dc5edd4ec0e9fc7af70fc 681 SMART SM01080 29 339 9.2E-30 T 22-04-2016 IPR007890 CHASE2 SMGD1_RS04525 8fca10f35f6dc5edd4ec0e9fc7af70fc 681 PANTHER PTHR11920 72 100 1.5E-60 T 22-04-2016 SMGD1_RS04525 8fca10f35f6dc5edd4ec0e9fc7af70fc 681 PANTHER PTHR11920 428 635 1.5E-60 T 22-04-2016 SMGD1_RS04525 8fca10f35f6dc5edd4ec0e9fc7af70fc 681 Pfam PF05226 CHASE2 domain 17 333 8.9E-40 T 22-04-2016 IPR007890 CHASE2 SMGD1_RS04525 8fca10f35f6dc5edd4ec0e9fc7af70fc 681 PANTHER PTHR11920:SF341 72 100 1.5E-60 T 22-04-2016 SMGD1_RS04525 8fca10f35f6dc5edd4ec0e9fc7af70fc 681 PANTHER PTHR11920:SF341 428 635 1.5E-60 T 22-04-2016 SMGD1_RS04525 8fca10f35f6dc5edd4ec0e9fc7af70fc 681 Gene3D G3DSA:3.30.70.1230 432 612 4.8E-47 T 22-04-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 SMGD1_RS04525 8fca10f35f6dc5edd4ec0e9fc7af70fc 681 SUPERFAMILY SSF55073 429 617 7.38E-58 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS04525 8fca10f35f6dc5edd4ec0e9fc7af70fc 681 SMART SM00044 390 600 1.9E-14 T 22-04-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 SMGD1_RS05400 c6f59ae046bbc6d1a1e19ee72d2594a6 117 PANTHER PTHR30041:SF4 1 107 4.2E-36 T 22-04-2016 SMGD1_RS05400 c6f59ae046bbc6d1a1e19ee72d2594a6 117 SUPERFAMILY SSF52833 4 115 5.02E-30 T 22-04-2016 IPR012336 Thioredoxin-like fold SMGD1_RS05400 c6f59ae046bbc6d1a1e19ee72d2594a6 117 Pfam PF03960 ArsC family 34 114 8.5E-16 T 22-04-2016 IPR006660 Arsenate reductase-like SMGD1_RS05400 c6f59ae046bbc6d1a1e19ee72d2594a6 117 Gene3D G3DSA:3.40.30.10 1 115 7.2E-40 T 22-04-2016 IPR012336 Thioredoxin-like fold SMGD1_RS05400 c6f59ae046bbc6d1a1e19ee72d2594a6 117 PANTHER PTHR30041 1 107 4.2E-36 T 22-04-2016 SMGD1_RS05400 c6f59ae046bbc6d1a1e19ee72d2594a6 117 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 4 113 1.2E-36 T 22-04-2016 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 SMGD1_RS03140 803cf8adc1fee3b3be933b5548e8bebb 996 Gene3D G3DSA:3.30.2060.10 105 178 1.5E-9 T 22-04-2016 SMGD1_RS03140 803cf8adc1fee3b3be933b5548e8bebb 996 SMART SM00487 477 671 2.5E-25 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SMGD1_RS03140 803cf8adc1fee3b3be933b5548e8bebb 996 SUPERFAMILY SSF141259 354 425 3.14E-20 T 22-04-2016 IPR003711 CarD-like/TRCF domain SMGD1_RS03140 803cf8adc1fee3b3be933b5548e8bebb 996 SUPERFAMILY SSF143517 867 975 2.22E-23 T 22-04-2016 SMGD1_RS03140 803cf8adc1fee3b3be933b5548e8bebb 996 SMART SM00982 878 978 6.0E-26 T 22-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 SMGD1_RS03140 803cf8adc1fee3b3be933b5548e8bebb 996 Pfam PF02559 CarD-like/TRCF domain 357 451 3.5E-22 T 22-04-2016 IPR003711 CarD-like/TRCF domain SMGD1_RS03140 803cf8adc1fee3b3be933b5548e8bebb 996 PANTHER PTHR14025 267 967 1.3E-221 T 22-04-2016 SMGD1_RS03140 803cf8adc1fee3b3be933b5548e8bebb 996 Pfam PF03461 TRCF domain 879 970 9.3E-20 T 22-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 SMGD1_RS03140 803cf8adc1fee3b3be933b5548e8bebb 996 Pfam PF00271 Helicase conserved C-terminal domain 680 784 2.8E-15 T 22-04-2016 IPR001650 Helicase, C-terminal SMGD1_RS03140 803cf8adc1fee3b3be933b5548e8bebb 996 SMART SM00490 698 785 1.4E-14 T 22-04-2016 IPR001650 Helicase, C-terminal SMGD1_RS03140 803cf8adc1fee3b3be933b5548e8bebb 996 SUPERFAMILY SSF52540 657 864 9.94E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS03140 803cf8adc1fee3b3be933b5548e8bebb 996 SUPERFAMILY SSF52540 16 203 1.86E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS03140 803cf8adc1fee3b3be933b5548e8bebb 996 PANTHER PTHR14025:SF21 267 967 1.3E-221 T 22-04-2016 SMGD1_RS03140 803cf8adc1fee3b3be933b5548e8bebb 996 SMART SM01058 356 453 1.1E-38 T 22-04-2016 IPR003711 CarD-like/TRCF domain SMGD1_RS03140 803cf8adc1fee3b3be933b5548e8bebb 996 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 3 973 23.812 T 22-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 SMGD1_RS03140 803cf8adc1fee3b3be933b5548e8bebb 996 Pfam PF00270 DEAD/DEAH box helicase 482 640 1.1E-14 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SMGD1_RS03140 803cf8adc1fee3b3be933b5548e8bebb 996 Gene3D G3DSA:3.40.50.300 664 838 1.0E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS03140 803cf8adc1fee3b3be933b5548e8bebb 996 SUPERFAMILY SSF52540 401 658 5.61E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS03140 803cf8adc1fee3b3be933b5548e8bebb 996 Gene3D G3DSA:3.40.50.300 466 661 3.4E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS08905 801e24fc40ab585dd25fadb782b7d556 712 Pfam PF02421 Ferrous iron transport protein B 16 171 1.6E-59 T 22-04-2016 IPR011619 Ferrous iron transport protein B, N-terminal GO:0005525|GO:0015093|GO:0015684|GO:0016021 SMGD1_RS08905 801e24fc40ab585dd25fadb782b7d556 712 SUPERFAMILY SSF52540 16 182 1.96E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS08905 801e24fc40ab585dd25fadb782b7d556 712 PANTHER PTHR11649 583 711 2.0E-222 T 22-04-2016 SMGD1_RS08905 801e24fc40ab585dd25fadb782b7d556 712 PANTHER PTHR11649 14 158 2.0E-222 T 22-04-2016 SMGD1_RS08905 801e24fc40ab585dd25fadb782b7d556 712 PANTHER PTHR11649 282 555 2.0E-222 T 22-04-2016 SMGD1_RS08905 801e24fc40ab585dd25fadb782b7d556 712 Pfam PF07670 Nucleoside recognition 368 460 7.9E-14 T 22-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 SMGD1_RS08905 801e24fc40ab585dd25fadb782b7d556 712 Pfam PF07670 Nucleoside recognition 528 682 2.5E-34 T 22-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 SMGD1_RS08905 801e24fc40ab585dd25fadb782b7d556 712 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 22 679 3.0E-186 T 22-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 SMGD1_RS08905 801e24fc40ab585dd25fadb782b7d556 712 PANTHER PTHR11649:SF37 583 711 2.0E-222 T 22-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 SMGD1_RS08905 801e24fc40ab585dd25fadb782b7d556 712 PANTHER PTHR11649:SF37 14 158 2.0E-222 T 22-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 SMGD1_RS08905 801e24fc40ab585dd25fadb782b7d556 712 PANTHER PTHR11649:SF37 282 555 2.0E-222 T 22-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 SMGD1_RS08905 801e24fc40ab585dd25fadb782b7d556 712 Gene3D G3DSA:3.40.50.300 15 181 1.8E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS08905 801e24fc40ab585dd25fadb782b7d556 712 Pfam PF07664 Ferrous iron transport protein B C terminus 471 523 5.9E-15 T 22-04-2016 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 SMGD1_RS08905 801e24fc40ab585dd25fadb782b7d556 712 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 14 171 7.7E-15 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SMGD1_RS08675 9ebc8f49dd746a0d4fcf7eb8e75e86c8 480 PRINTS PR01050 Pyruvate kinase family signature 219 245 1.5E-57 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SMGD1_RS08675 9ebc8f49dd746a0d4fcf7eb8e75e86c8 480 PRINTS PR01050 Pyruvate kinase family signature 60 76 1.5E-57 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SMGD1_RS08675 9ebc8f49dd746a0d4fcf7eb8e75e86c8 480 PRINTS PR01050 Pyruvate kinase family signature 271 295 1.5E-57 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SMGD1_RS08675 9ebc8f49dd746a0d4fcf7eb8e75e86c8 480 PRINTS PR01050 Pyruvate kinase family signature 296 314 1.5E-57 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SMGD1_RS08675 9ebc8f49dd746a0d4fcf7eb8e75e86c8 480 PRINTS PR01050 Pyruvate kinase family signature 246 270 1.5E-57 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SMGD1_RS08675 9ebc8f49dd746a0d4fcf7eb8e75e86c8 480 PRINTS PR01050 Pyruvate kinase family signature 189 203 1.5E-57 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SMGD1_RS08675 9ebc8f49dd746a0d4fcf7eb8e75e86c8 480 PRINTS PR01050 Pyruvate kinase family signature 315 331 1.5E-57 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SMGD1_RS08675 9ebc8f49dd746a0d4fcf7eb8e75e86c8 480 SUPERFAMILY SSF50800 71 169 1.92E-18 T 22-04-2016 IPR011037 Pyruvate kinase-like, insert domain SMGD1_RS08675 9ebc8f49dd746a0d4fcf7eb8e75e86c8 480 PANTHER PTHR11817 3 468 4.8E-187 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SMGD1_RS08675 9ebc8f49dd746a0d4fcf7eb8e75e86c8 480 Pfam PF02887 Pyruvate kinase, alpha/beta domain 356 469 6.6E-25 T 22-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SMGD1_RS08675 9ebc8f49dd746a0d4fcf7eb8e75e86c8 480 Pfam PF00224 Pyruvate kinase, barrel domain 3 343 1.3E-119 T 22-04-2016 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SMGD1_RS08675 9ebc8f49dd746a0d4fcf7eb8e75e86c8 480 PANTHER PTHR11817:SF3 3 468 4.8E-187 T 22-04-2016 SMGD1_RS08675 9ebc8f49dd746a0d4fcf7eb8e75e86c8 480 SUPERFAMILY SSF51621 170 345 2.51E-90 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SMGD1_RS08675 9ebc8f49dd746a0d4fcf7eb8e75e86c8 480 SUPERFAMILY SSF51621 2 76 2.51E-90 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SMGD1_RS08675 9ebc8f49dd746a0d4fcf7eb8e75e86c8 480 Gene3D G3DSA:2.40.33.10 74 169 6.6E-21 T 22-04-2016 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SMGD1_RS08675 9ebc8f49dd746a0d4fcf7eb8e75e86c8 480 Gene3D G3DSA:3.40.1380.20 328 468 1.0E-31 T 22-04-2016 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SMGD1_RS08675 9ebc8f49dd746a0d4fcf7eb8e75e86c8 480 Gene3D G3DSA:3.20.20.60 171 327 2.3E-95 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SMGD1_RS08675 9ebc8f49dd746a0d4fcf7eb8e75e86c8 480 Gene3D G3DSA:3.20.20.60 4 73 2.3E-95 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SMGD1_RS08675 9ebc8f49dd746a0d4fcf7eb8e75e86c8 480 SUPERFAMILY SSF52935 326 469 2.88E-28 T 22-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SMGD1_RS08675 9ebc8f49dd746a0d4fcf7eb8e75e86c8 480 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 3 468 2.4E-142 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SMGD1_RS08565 c2b872f55431c3bf81d2aeefc30fb44c 740 Gene3D G3DSA:3.40.228.10 1 202 5.8E-71 T 22-04-2016 SMGD1_RS08565 c2b872f55431c3bf81d2aeefc30fb44c 740 PANTHER PTHR11615 192 392 9.3E-139 T 22-04-2016 SMGD1_RS08565 c2b872f55431c3bf81d2aeefc30fb44c 740 PANTHER PTHR11615 1 173 9.3E-139 T 22-04-2016 SMGD1_RS08565 c2b872f55431c3bf81d2aeefc30fb44c 740 PANTHER PTHR11615 519 740 9.3E-139 T 22-04-2016 SMGD1_RS08565 c2b872f55431c3bf81d2aeefc30fb44c 740 SUPERFAMILY SSF50692 541 570 1.92E-32 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain SMGD1_RS08565 c2b872f55431c3bf81d2aeefc30fb44c 740 SUPERFAMILY SSF50692 602 740 1.92E-32 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain SMGD1_RS08565 c2b872f55431c3bf81d2aeefc30fb44c 740 Pfam PF01568 Molydopterin dinucleotide binding domain 607 732 1.5E-18 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 SMGD1_RS08565 c2b872f55431c3bf81d2aeefc30fb44c 740 PANTHER PTHR11615:SF140 192 392 9.3E-139 T 22-04-2016 SMGD1_RS08565 c2b872f55431c3bf81d2aeefc30fb44c 740 PANTHER PTHR11615:SF140 1 173 9.3E-139 T 22-04-2016 SMGD1_RS08565 c2b872f55431c3bf81d2aeefc30fb44c 740 PANTHER PTHR11615:SF140 519 740 9.3E-139 T 22-04-2016 SMGD1_RS08565 c2b872f55431c3bf81d2aeefc30fb44c 740 Gene3D G3DSA:3.40.50.740 233 389 7.6E-43 T 22-04-2016 SMGD1_RS08565 c2b872f55431c3bf81d2aeefc30fb44c 740 Gene3D G3DSA:2.40.40.20 433 463 6.0E-45 T 22-04-2016 SMGD1_RS08565 c2b872f55431c3bf81d2aeefc30fb44c 740 Gene3D G3DSA:2.40.40.20 556 567 6.0E-45 T 22-04-2016 SMGD1_RS08565 c2b872f55431c3bf81d2aeefc30fb44c 740 Gene3D G3DSA:2.40.40.20 601 740 6.0E-45 T 22-04-2016 SMGD1_RS08565 c2b872f55431c3bf81d2aeefc30fb44c 740 Pfam PF00384 Molybdopterin oxidoreductase 2 359 1.1E-49 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 SMGD1_RS08565 c2b872f55431c3bf81d2aeefc30fb44c 740 SUPERFAMILY SSF53706 1 400 4.84E-128 T 22-04-2016 SMGD1_RS01515 4fd28813f21e0a2d1ac196d071bea15b 284 Pfam PF03747 ADP-ribosylglycohydrolase 9 257 2.6E-24 T 22-04-2016 IPR005502 ADP-ribosylation/Crystallin J1 SMGD1_RS01515 4fd28813f21e0a2d1ac196d071bea15b 284 SUPERFAMILY SSF101478 5 280 1.24E-23 T 22-04-2016 IPR005502 ADP-ribosylation/Crystallin J1 SMGD1_RS01635 b54bf9cf4dc4a31fb969f0ae2324398a 437 Pfam PF01225 Mur ligase family, catalytic domain 2 98 1.3E-24 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 SMGD1_RS01635 b54bf9cf4dc4a31fb969f0ae2324398a 437 PANTHER PTHR23135:SF5 1 433 1.3E-103 T 22-04-2016 SMGD1_RS01635 b54bf9cf4dc4a31fb969f0ae2324398a 437 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 2 434 3.4E-116 T 22-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SMGD1_RS01635 b54bf9cf4dc4a31fb969f0ae2324398a 437 Gene3D G3DSA:3.40.50.720 2 87 5.4E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS01635 b54bf9cf4dc4a31fb969f0ae2324398a 437 SUPERFAMILY SSF53623 88 289 5.63E-33 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SMGD1_RS01635 b54bf9cf4dc4a31fb969f0ae2324398a 437 Pfam PF08245 Mur ligase middle domain 105 219 2.4E-6 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SMGD1_RS01635 b54bf9cf4dc4a31fb969f0ae2324398a 437 Pfam PF02875 Mur ligase family, glutamate ligase domain 292 379 2.8E-16 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SMGD1_RS01635 b54bf9cf4dc4a31fb969f0ae2324398a 437 Gene3D G3DSA:3.90.190.20 293 436 1.0E-35 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SMGD1_RS01635 b54bf9cf4dc4a31fb969f0ae2324398a 437 SUPERFAMILY SSF53244 290 436 1.28E-27 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SMGD1_RS01635 b54bf9cf4dc4a31fb969f0ae2324398a 437 PANTHER PTHR23135 1 433 1.3E-103 T 22-04-2016 SMGD1_RS01635 b54bf9cf4dc4a31fb969f0ae2324398a 437 Gene3D G3DSA:3.40.1190.10 89 292 3.9E-35 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SMGD1_RS01635 b54bf9cf4dc4a31fb969f0ae2324398a 437 SUPERFAMILY SSF51984 1 87 1.07E-26 T 22-04-2016 SMGD1_RS10975 e7aac49ffb29f2c5ac14e7eb8dd34526 162 SUPERFAMILY SSF55083 31 161 7.98E-36 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 SMGD1_RS10975 e7aac49ffb29f2c5ac14e7eb8dd34526 162 PANTHER PTHR20941 32 160 1.0E-33 T 22-04-2016 SMGD1_RS10975 e7aac49ffb29f2c5ac14e7eb8dd34526 162 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 35 161 1.1E-23 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 SMGD1_RS10975 e7aac49ffb29f2c5ac14e7eb8dd34526 162 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 34 161 5.0E-33 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 SMGD1_RS10975 e7aac49ffb29f2c5ac14e7eb8dd34526 162 Gene3D G3DSA:3.30.70.560 32 161 5.9E-35 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 SMGD1_RS05080 d694839777cde902b8c963110b29c4bc 320 PANTHER PTHR38418:SF1 27 296 1.0E-45 T 22-04-2016 SMGD1_RS05080 d694839777cde902b8c963110b29c4bc 320 PANTHER PTHR38418 27 296 1.0E-45 T 22-04-2016 SMGD1_RS05080 d694839777cde902b8c963110b29c4bc 320 Pfam PF01380 SIS domain 37 167 6.2E-29 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 SMGD1_RS05080 d694839777cde902b8c963110b29c4bc 320 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 41 310 2.9E-111 T 22-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 SMGD1_RS05080 d694839777cde902b8c963110b29c4bc 320 PIRSF PIRSF004692 1 320 4.0E-128 T 22-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 SMGD1_RS05080 d694839777cde902b8c963110b29c4bc 320 Pfam PF00571 CBS domain 197 253 1.1E-5 T 22-04-2016 IPR000644 CBS domain SMGD1_RS05080 d694839777cde902b8c963110b29c4bc 320 Gene3D G3DSA:3.40.50.10490 4 190 2.9E-50 T 22-04-2016 SMGD1_RS05080 d694839777cde902b8c963110b29c4bc 320 Gene3D G3DSA:3.10.580.10 191 316 1.4E-26 T 22-04-2016 SMGD1_RS05080 d694839777cde902b8c963110b29c4bc 320 SUPERFAMILY SSF53697 2 273 4.45E-61 T 22-04-2016 SMGD1_RS05135 00a6657c4acf240c95f456f1f0b12166 555 PANTHER PTHR30480:SF5 5 360 3.7E-80 T 22-04-2016 SMGD1_RS05135 00a6657c4acf240c95f456f1f0b12166 555 PANTHER PTHR30480 5 360 3.7E-80 T 22-04-2016 SMGD1_RS05135 00a6657c4acf240c95f456f1f0b12166 555 SUPERFAMILY SSF55846 372 545 7.59E-31 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 SMGD1_RS05135 00a6657c4acf240c95f456f1f0b12166 555 Gene3D G3DSA:3.20.20.300 27 364 1.7E-80 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 SMGD1_RS05135 00a6657c4acf240c95f456f1f0b12166 555 SMART SM00644 381 520 1.4E-7 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 SMGD1_RS05135 00a6657c4acf240c95f456f1f0b12166 555 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 392 536 3.5E-16 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 SMGD1_RS05135 00a6657c4acf240c95f456f1f0b12166 555 Gene3D G3DSA:3.40.80.10 374 548 2.1E-32 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 SMGD1_RS05135 00a6657c4acf240c95f456f1f0b12166 555 SUPERFAMILY SSF51445 26 361 3.16E-69 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily SMGD1_RS05135 00a6657c4acf240c95f456f1f0b12166 555 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 21 352 6.3E-68 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 SMGD1_RS07035 894df40f0e378870a8c11398f53b7096 230 SUPERFAMILY SSF46894 151 227 4.42E-8 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SMGD1_RS07035 894df40f0e378870a8c11398f53b7096 230 Gene3D G3DSA:3.40.50.2300 9 133 3.0E-30 T 22-04-2016 SMGD1_RS07035 894df40f0e378870a8c11398f53b7096 230 Gene3D G3DSA:1.10.10.10 138 227 7.7E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMGD1_RS07035 894df40f0e378870a8c11398f53b7096 230 SMART SM00862 154 227 5.8E-9 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMGD1_RS07035 894df40f0e378870a8c11398f53b7096 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 227 1.1E-11 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMGD1_RS07035 894df40f0e378870a8c11398f53b7096 230 Pfam PF00072 Response regulator receiver domain 12 120 1.7E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS07035 894df40f0e378870a8c11398f53b7096 230 PANTHER PTHR26402 10 228 7.0E-37 T 22-04-2016 SMGD1_RS07035 894df40f0e378870a8c11398f53b7096 230 SMART SM00448 10 121 5.7E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS07035 894df40f0e378870a8c11398f53b7096 230 SUPERFAMILY SSF52172 9 175 2.13E-32 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS00755 cb20b3abec82733ec4aca0ef5cac6e82 146 Pfam PF04186 FxsA cytoplasmic membrane protein 3 106 2.1E-17 T 22-04-2016 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 SMGD1_RS09830 085c7e3de41c1ea22c07eb6adfbbd322 462 PANTHER PTHR13285 1 440 4.4E-130 T 22-04-2016 SMGD1_RS09830 085c7e3de41c1ea22c07eb6adfbbd322 462 PANTHER PTHR13285:SF23 1 440 4.4E-130 T 22-04-2016 SMGD1_RS09830 085c7e3de41c1ea22c07eb6adfbbd322 462 Pfam PF03062 MBOAT, membrane-bound O-acyltransferase family 88 375 4.3E-32 T 22-04-2016 IPR004299 Membrane bound O-acyl transferase, MBOAT SMGD1_RS09830 085c7e3de41c1ea22c07eb6adfbbd322 462 PIRSF PIRSF500217 1 462 5.1E-149 T 22-04-2016 IPR028362 Alginate O-acetyltransferase AlgI GO:0042121 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.-|UniPathway: UPA00286 SMGD1_RS09830 085c7e3de41c1ea22c07eb6adfbbd322 462 PIRSF PIRSF016636 1 462 1.2E-151 T 22-04-2016 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB SMGD1_RS04455 fab079c36194d05c38912de75404424e 1381 Gene3D G3DSA:3.90.1100.10 460 609 9.2E-132 T 22-04-2016 SMGD1_RS04455 fab079c36194d05c38912de75404424e 1381 Gene3D G3DSA:3.90.1100.10 20 156 9.2E-132 T 22-04-2016 SMGD1_RS04455 fab079c36194d05c38912de75404424e 1381 Gene3D G3DSA:3.90.1100.10 677 731 9.2E-132 T 22-04-2016 SMGD1_RS04455 fab079c36194d05c38912de75404424e 1381 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1376 11.541 T 22-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SMGD1_RS04455 fab079c36194d05c38912de75404424e 1381 SUPERFAMILY SSF64484 373 953 0.0 T 22-04-2016 SMGD1_RS04455 fab079c36194d05c38912de75404424e 1381 SUPERFAMILY SSF64484 11 230 0.0 T 22-04-2016 SMGD1_RS04455 fab079c36194d05c38912de75404424e 1381 SUPERFAMILY SSF64484 1071 1376 0.0 T 22-04-2016 SMGD1_RS04455 fab079c36194d05c38912de75404424e 1381 Pfam PF04560 RNA polymerase Rpb2, domain 7 1300 1374 4.2E-23 T 22-04-2016 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SMGD1_RS04455 fab079c36194d05c38912de75404424e 1381 Gene3D G3DSA:3.90.1110.10 362 459 7.5E-60 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SMGD1_RS04455 fab079c36194d05c38912de75404424e 1381 Gene3D G3DSA:3.90.1110.10 158 234 7.5E-60 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SMGD1_RS04455 fab079c36194d05c38912de75404424e 1381 Gene3D G3DSA:2.40.270.10 1092 1276 3.8E-82 T 22-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SMGD1_RS04455 fab079c36194d05c38912de75404424e 1381 Gene3D G3DSA:2.40.270.10 807 834 3.8E-82 T 22-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SMGD1_RS04455 fab079c36194d05c38912de75404424e 1381 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1095 1107 - T 22-04-2016 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SMGD1_RS04455 fab079c36194d05c38912de75404424e 1381 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 10 1373 0.0 T 22-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SMGD1_RS04455 fab079c36194d05c38912de75404424e 1381 Gene3D G3DSA:2.30.150.10 610 674 2.9E-17 T 22-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SMGD1_RS04455 fab079c36194d05c38912de75404424e 1381 Gene3D G3DSA:2.40.50.150 1077 1091 2.9E-48 T 22-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SMGD1_RS04455 fab079c36194d05c38912de75404424e 1381 Gene3D G3DSA:2.40.50.150 842 951 2.9E-48 T 22-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SMGD1_RS04455 fab079c36194d05c38912de75404424e 1381 PANTHER PTHR20856:SF20 1065 1160 0.0 T 22-04-2016 SMGD1_RS04455 fab079c36194d05c38912de75404424e 1381 PANTHER PTHR20856:SF20 353 944 0.0 T 22-04-2016 SMGD1_RS04455 fab079c36194d05c38912de75404424e 1381 PANTHER PTHR20856:SF20 3 234 0.0 T 22-04-2016 SMGD1_RS04455 fab079c36194d05c38912de75404424e 1381 PANTHER PTHR20856:SF20 1216 1380 0.0 T 22-04-2016 SMGD1_RS04455 fab079c36194d05c38912de75404424e 1381 Pfam PF04565 RNA polymerase Rpb2, domain 3 531 599 3.9E-30 T 22-04-2016 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SMGD1_RS04455 fab079c36194d05c38912de75404424e 1381 Pfam PF04561 RNA polymerase Rpb2, domain 2 156 235 3.1E-12 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SMGD1_RS04455 fab079c36194d05c38912de75404424e 1381 Pfam PF04561 RNA polymerase Rpb2, domain 2 365 470 3.0E-17 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SMGD1_RS04455 fab079c36194d05c38912de75404424e 1381 PANTHER PTHR20856 1065 1160 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SMGD1_RS04455 fab079c36194d05c38912de75404424e 1381 PANTHER PTHR20856 353 944 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SMGD1_RS04455 fab079c36194d05c38912de75404424e 1381 PANTHER PTHR20856 3 234 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SMGD1_RS04455 fab079c36194d05c38912de75404424e 1381 PANTHER PTHR20856 1216 1380 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SMGD1_RS04455 fab079c36194d05c38912de75404424e 1381 Pfam PF00562 RNA polymerase Rpb2, domain 6 736 1297 2.4E-147 T 22-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SMGD1_RS04455 fab079c36194d05c38912de75404424e 1381 Pfam PF04563 RNA polymerase beta subunit 27 518 8.6E-20 T 22-04-2016 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SMGD1_RS04455 fab079c36194d05c38912de75404424e 1381 Gene3D G3DSA:2.40.50.100 733 806 4.8E-25 T 22-04-2016 SMGD1_RS04455 fab079c36194d05c38912de75404424e 1381 Pfam PF10385 RNA polymerase beta subunit external 1 domain 610 674 2.6E-16 T 22-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SMGD1_RS03295 c6cfbb56dc2ed1dbc9d0f0efe8a6f1b0 491 SUPERFAMILY SSF53649 3 76 4.84E-69 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 SMGD1_RS03295 c6cfbb56dc2ed1dbc9d0f0efe8a6f1b0 491 SUPERFAMILY SSF53649 299 487 4.84E-69 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 SMGD1_RS03295 c6cfbb56dc2ed1dbc9d0f0efe8a6f1b0 491 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 3 489 2.0E-196 T 22-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 SMGD1_RS03295 c6cfbb56dc2ed1dbc9d0f0efe8a6f1b0 491 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 81 284 4.0E-68 T 22-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 SMGD1_RS03295 c6cfbb56dc2ed1dbc9d0f0efe8a6f1b0 491 Gene3D G3DSA:3.40.1450.10 77 294 1.7E-76 T 22-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 SMGD1_RS03295 c6cfbb56dc2ed1dbc9d0f0efe8a6f1b0 491 PIRSF PIRSF001492 1 491 5.8E-187 T 22-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 SMGD1_RS03295 c6cfbb56dc2ed1dbc9d0f0efe8a6f1b0 491 SUPERFAMILY SSF64158 76 293 4.05E-73 T 22-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 SMGD1_RS03295 c6cfbb56dc2ed1dbc9d0f0efe8a6f1b0 491 PANTHER PTHR31637:SF0 3 491 3.1E-214 T 22-04-2016 SMGD1_RS03295 c6cfbb56dc2ed1dbc9d0f0efe8a6f1b0 491 Pfam PF01676 Metalloenzyme superfamily 3 481 3.7E-71 T 22-04-2016 IPR006124 Metalloenzyme GO:0003824|GO:0046872 SMGD1_RS03295 c6cfbb56dc2ed1dbc9d0f0efe8a6f1b0 491 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 3 491 43.147 T 22-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 SMGD1_RS03295 c6cfbb56dc2ed1dbc9d0f0efe8a6f1b0 491 Gene3D G3DSA:3.40.720.10 299 487 6.5E-76 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 SMGD1_RS03295 c6cfbb56dc2ed1dbc9d0f0efe8a6f1b0 491 Gene3D G3DSA:3.40.720.10 3 76 6.5E-76 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 SMGD1_RS03295 c6cfbb56dc2ed1dbc9d0f0efe8a6f1b0 491 PANTHER PTHR31637 3 491 3.1E-214 T 22-04-2016 SMGD1_RS00955 593bf7033cf0f637dec3baaaa8d3dee2 780 Pfam PF17149 Periplasmic sensor domain found in signal transduction proteins 42 147 8.5E-19 T 22-04-2016 IPR033414 Periplasmic sensor domain UniPathway: UPA00073 SMGD1_RS00955 593bf7033cf0f637dec3baaaa8d3dee2 780 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 370 523 2.7E-18 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS00955 593bf7033cf0f637dec3baaaa8d3dee2 780 SMART SM00091 247 315 0.0092 T 22-04-2016 IPR000014 PAS domain SMGD1_RS00955 593bf7033cf0f637dec3baaaa8d3dee2 780 Pfam PF00990 Diguanylate cyclase, GGDEF domain 376 518 1.5E-22 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS00955 593bf7033cf0f637dec3baaaa8d3dee2 780 SMART SM00052 534 773 1.6E-52 T 22-04-2016 IPR001633 EAL domain SMGD1_RS00955 593bf7033cf0f637dec3baaaa8d3dee2 780 SUPERFAMILY SSF55785 259 360 1.4E-27 T 22-04-2016 IPR000014 PAS domain SMGD1_RS00955 593bf7033cf0f637dec3baaaa8d3dee2 780 Gene3D G3DSA:3.30.70.270 376 523 2.3E-28 T 22-04-2016 SMGD1_RS00955 593bf7033cf0f637dec3baaaa8d3dee2 780 Gene3D G3DSA:3.20.20.450 537 779 1.0E-66 T 22-04-2016 IPR001633 EAL domain SMGD1_RS00955 593bf7033cf0f637dec3baaaa8d3dee2 780 PANTHER PTHR33121 527 780 8.4E-54 T 22-04-2016 SMGD1_RS00955 593bf7033cf0f637dec3baaaa8d3dee2 780 PANTHER PTHR33121:SF10 527 780 8.4E-54 T 22-04-2016 SMGD1_RS00955 593bf7033cf0f637dec3baaaa8d3dee2 780 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 257 368 1.0E-16 T 22-04-2016 IPR000014 PAS domain SMGD1_RS00955 593bf7033cf0f637dec3baaaa8d3dee2 780 Pfam PF13426 PAS domain 265 362 9.6E-15 T 22-04-2016 IPR000014 PAS domain SMGD1_RS00955 593bf7033cf0f637dec3baaaa8d3dee2 780 SUPERFAMILY SSF141868 541 778 3.53E-65 T 22-04-2016 IPR001633 EAL domain SMGD1_RS00955 593bf7033cf0f637dec3baaaa8d3dee2 780 SMART SM00086 321 363 5.9E-4 T 22-04-2016 IPR001610 PAC motif SMGD1_RS00955 593bf7033cf0f637dec3baaaa8d3dee2 780 Pfam PF00563 EAL domain 541 768 2.8E-56 T 22-04-2016 IPR001633 EAL domain SMGD1_RS00955 593bf7033cf0f637dec3baaaa8d3dee2 780 Gene3D G3DSA:3.30.450.20 264 362 4.3E-26 T 22-04-2016 SMGD1_RS00955 593bf7033cf0f637dec3baaaa8d3dee2 780 SMART SM00267 363 523 2.0E-22 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS00955 593bf7033cf0f637dec3baaaa8d3dee2 780 SUPERFAMILY SSF55073 379 522 2.35E-26 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS13065 53a3895332e8a666a69fcdeedde02b2f 562 PANTHER PTHR32331 1 554 2.1E-276 T 22-04-2016 SMGD1_RS13065 53a3895332e8a666a69fcdeedde02b2f 562 Gene3D G3DSA:3.80.30.20 282 537 8.0E-37 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe SMGD1_RS13065 53a3895332e8a666a69fcdeedde02b2f 562 Pfam PF08497 Radical SAM N-terminal 1 285 1.4E-112 T 22-04-2016 IPR013704 Uncharacterised protein family UPF0313, N-terminal SMGD1_RS13065 53a3895332e8a666a69fcdeedde02b2f 562 Pfam PF04055 Radical SAM superfamily 289 495 5.1E-15 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SMGD1_RS13065 53a3895332e8a666a69fcdeedde02b2f 562 TIGRFAM TIGR03904 SAM_YgiQ: uncharacterized radical SAM protein YgiQ 1 550 4.7E-230 T 22-04-2016 IPR022946 Uncharacterised protein family UPF0313 SMGD1_RS13065 53a3895332e8a666a69fcdeedde02b2f 562 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 286 306 - T 22-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 SMGD1_RS13065 53a3895332e8a666a69fcdeedde02b2f 562 SUPERFAMILY SSF102114 288 348 1.04E-10 T 22-04-2016 SMGD1_RS13065 53a3895332e8a666a69fcdeedde02b2f 562 SUPERFAMILY SSF102114 379 531 1.04E-10 T 22-04-2016 SMGD1_RS13065 53a3895332e8a666a69fcdeedde02b2f 562 SMART SM00729 282 537 7.1E-10 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 SMGD1_RS03200 bf46d4d6cd485f9e6f35e1e1f232498a 521 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 1 516 40.963 T 22-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 SMGD1_RS03200 bf46d4d6cd485f9e6f35e1e1f232498a 521 Pfam PF02355 Protein export membrane protein 337 503 2.9E-19 T 22-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial SMGD1_RS03200 bf46d4d6cd485f9e6f35e1e1f232498a 521 Gene3D G3DSA:1.20.1640.10 342 514 2.0E-30 T 22-04-2016 SMGD1_RS03200 bf46d4d6cd485f9e6f35e1e1f232498a 521 SUPERFAMILY SSF82866 28 42 6.15E-46 T 22-04-2016 SMGD1_RS03200 bf46d4d6cd485f9e6f35e1e1f232498a 521 SUPERFAMILY SSF82866 310 507 6.15E-46 T 22-04-2016 SMGD1_RS03200 bf46d4d6cd485f9e6f35e1e1f232498a 521 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 263 493 1.2E-80 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial SMGD1_RS03200 bf46d4d6cd485f9e6f35e1e1f232498a 521 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 36 498 4.5E-144 T 22-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 SMGD1_RS03200 bf46d4d6cd485f9e6f35e1e1f232498a 521 PANTHER PTHR30081 231 520 1.8E-126 T 22-04-2016 SMGD1_RS03200 bf46d4d6cd485f9e6f35e1e1f232498a 521 PANTHER PTHR30081 134 195 1.8E-126 T 22-04-2016 SMGD1_RS03200 bf46d4d6cd485f9e6f35e1e1f232498a 521 PANTHER PTHR30081 18 86 1.8E-126 T 22-04-2016 SMGD1_RS03200 bf46d4d6cd485f9e6f35e1e1f232498a 521 PRINTS PR00702 Acriflavin resistance protein family signature 477 500 2.3E-8 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMGD1_RS03200 bf46d4d6cd485f9e6f35e1e1f232498a 521 PRINTS PR00702 Acriflavin resistance protein family signature 349 372 2.3E-8 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMGD1_RS03200 bf46d4d6cd485f9e6f35e1e1f232498a 521 PRINTS PR00702 Acriflavin resistance protein family signature 402 426 2.3E-8 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMGD1_RS03200 bf46d4d6cd485f9e6f35e1e1f232498a 521 PANTHER PTHR30081:SF1 231 520 1.8E-126 T 22-04-2016 SMGD1_RS03200 bf46d4d6cd485f9e6f35e1e1f232498a 521 PANTHER PTHR30081:SF1 134 195 1.8E-126 T 22-04-2016 SMGD1_RS03200 bf46d4d6cd485f9e6f35e1e1f232498a 521 PANTHER PTHR30081:SF1 18 86 1.8E-126 T 22-04-2016 SMGD1_RS14410 96c9d48d7e1c74f7462d177122b0021c 460 Pfam PF13437 HlyD family secretion protein 311 420 3.5E-18 T 22-04-2016 SMGD1_RS14410 96c9d48d7e1c74f7462d177122b0021c 460 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 439 459 1.8E-37 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 SMGD1_RS14410 96c9d48d7e1c74f7462d177122b0021c 460 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 356 380 1.8E-37 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 SMGD1_RS14410 96c9d48d7e1c74f7462d177122b0021c 460 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 54 77 1.8E-37 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 SMGD1_RS14410 96c9d48d7e1c74f7462d177122b0021c 460 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 323 344 1.8E-37 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 SMGD1_RS14410 96c9d48d7e1c74f7462d177122b0021c 460 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 424 439 1.8E-37 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 SMGD1_RS14410 96c9d48d7e1c74f7462d177122b0021c 460 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 380 403 1.8E-37 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 SMGD1_RS14410 96c9d48d7e1c74f7462d177122b0021c 460 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 96 116 1.8E-37 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 SMGD1_RS14410 96c9d48d7e1c74f7462d177122b0021c 460 Gene3D G3DSA:2.40.50.100 88 118 4.5E-18 T 22-04-2016 SMGD1_RS14410 96c9d48d7e1c74f7462d177122b0021c 460 Gene3D G3DSA:2.40.50.100 308 344 4.5E-18 T 22-04-2016 SMGD1_RS14410 96c9d48d7e1c74f7462d177122b0021c 460 ProSitePatterns PS00543 HlyD family secretion proteins signature. 424 446 - T 22-04-2016 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 SMGD1_RS14410 96c9d48d7e1c74f7462d177122b0021c 460 PANTHER PTHR30386 9 139 5.0E-132 T 22-04-2016 SMGD1_RS14410 96c9d48d7e1c74f7462d177122b0021c 460 PANTHER PTHR30386 170 460 5.0E-132 T 22-04-2016 SMGD1_RS14410 96c9d48d7e1c74f7462d177122b0021c 460 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 46 460 8.2E-118 T 22-04-2016 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 SMGD1_RS14410 96c9d48d7e1c74f7462d177122b0021c 460 Pfam PF13533 Biotin-lipoyl like 93 121 2.2E-8 T 22-04-2016 SMGD1_RS14410 96c9d48d7e1c74f7462d177122b0021c 460 PANTHER PTHR30386:SF4 9 139 5.0E-132 T 22-04-2016 SMGD1_RS14410 96c9d48d7e1c74f7462d177122b0021c 460 PANTHER PTHR30386:SF4 170 460 5.0E-132 T 22-04-2016 SMGD1_RS05105 caaa55e7ad2df19044a6502942514fd5 568 SUPERFAMILY SSF52172 16 141 3.56E-29 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS05105 caaa55e7ad2df19044a6502942514fd5 568 Gene3D G3DSA:3.30.565.10 445 547 5.0E-5 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS05105 caaa55e7ad2df19044a6502942514fd5 568 Pfam PF00072 Response regulator receiver domain 22 130 2.8E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS05105 caaa55e7ad2df19044a6502942514fd5 568 SMART SM00448 19 130 3.2E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS05105 caaa55e7ad2df19044a6502942514fd5 568 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 217 398 4.4E-13 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 SMGD1_RS05105 caaa55e7ad2df19044a6502942514fd5 568 PANTHER PTHR26402 458 467 2.4E-25 T 22-04-2016 SMGD1_RS05105 caaa55e7ad2df19044a6502942514fd5 568 PANTHER PTHR26402 19 151 2.4E-25 T 22-04-2016 SMGD1_RS05105 caaa55e7ad2df19044a6502942514fd5 568 SMART SM00331 188 400 1.0E-9 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 SMGD1_RS05105 caaa55e7ad2df19044a6502942514fd5 568 Gene3D G3DSA:3.40.50.2300 16 141 1.3E-27 T 22-04-2016 SMGD1_RS06690 5154e38c03b919b72aa03b0a15df7a96 461 PANTHER PTHR21343:SF1 1 459 3.1E-131 T 22-04-2016 SMGD1_RS06690 5154e38c03b919b72aa03b0a15df7a96 461 SUPERFAMILY SSF52540 1 227 1.77E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS06690 5154e38c03b919b72aa03b0a15df7a96 461 Gene3D G3DSA:3.40.50.300 1 227 7.7E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS06690 5154e38c03b919b72aa03b0a15df7a96 461 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 251 412 3.3E-34 T 22-04-2016 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 UniPathway: UPA00148 SMGD1_RS06690 5154e38c03b919b72aa03b0a15df7a96 461 Gene3D G3DSA:3.40.50.880 250 391 1.1E-17 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SMGD1_RS06690 5154e38c03b919b72aa03b0a15df7a96 461 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 6 454 5.1E-119 T 22-04-2016 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 UniPathway: UPA00148 SMGD1_RS06690 5154e38c03b919b72aa03b0a15df7a96 461 PANTHER PTHR21343 1 459 3.1E-131 T 22-04-2016 SMGD1_RS06690 5154e38c03b919b72aa03b0a15df7a96 461 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 4 226 1.5E-20 T 22-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain SMGD1_RS06690 5154e38c03b919b72aa03b0a15df7a96 461 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 461 116.427 T 22-04-2016 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 UniPathway: UPA00148 SMGD1_RS06690 5154e38c03b919b72aa03b0a15df7a96 461 SUPERFAMILY SSF52317 190 236 1.52E-21 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SMGD1_RS06690 5154e38c03b919b72aa03b0a15df7a96 461 SUPERFAMILY SSF52317 263 402 1.52E-21 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SMGD1_RS03620 e09b8bb0f601a9c27f496c5277799d5e 232 Pfam PF01553 Acyltransferase 64 173 7.6E-22 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 SMGD1_RS03620 e09b8bb0f601a9c27f496c5277799d5e 232 SUPERFAMILY SSF69593 9 222 2.75E-34 T 22-04-2016 SMGD1_RS03620 e09b8bb0f601a9c27f496c5277799d5e 232 SMART SM00563 62 176 6.8E-29 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 SMGD1_RS03620 e09b8bb0f601a9c27f496c5277799d5e 232 Gene3D G3DSA:3.40.1130.10 62 180 1.8E-20 T 22-04-2016 SMGD1_RS03620 e09b8bb0f601a9c27f496c5277799d5e 232 PANTHER PTHR10434 1 226 5.7E-37 T 22-04-2016 SMGD1_RS03620 e09b8bb0f601a9c27f496c5277799d5e 232 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 51 173 5.5E-32 T 22-04-2016 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|Reactome: REACT_22258|UniPathway: UPA00557 SMGD1_RS03620 e09b8bb0f601a9c27f496c5277799d5e 232 PANTHER PTHR10434:SF11 1 226 5.7E-37 T 22-04-2016 SMGD1_RS10070 2f2bb95bb15884b58fc5df9208243fe4 427 Pfam PF07695 7TM diverse intracellular signalling 27 228 1.8E-21 T 22-04-2016 IPR011623 7TM-DISM receptor, extracellular domain, type 1 SMGD1_RS10070 2f2bb95bb15884b58fc5df9208243fe4 427 PANTHER PTHR24423:SF472 237 388 8.6E-22 T 22-04-2016 SMGD1_RS10070 2f2bb95bb15884b58fc5df9208243fe4 427 PANTHER PTHR24423 237 388 8.6E-22 T 22-04-2016 SMGD1_RS10070 2f2bb95bb15884b58fc5df9208243fe4 427 Gene3D G3DSA:3.30.565.10 303 391 1.5E-6 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS10070 2f2bb95bb15884b58fc5df9208243fe4 427 Pfam PF07568 Histidine kinase 246 315 5.8E-20 T 22-04-2016 IPR011495 Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain SMGD1_RS10070 2f2bb95bb15884b58fc5df9208243fe4 427 SUPERFAMILY SSF55874 318 419 5.37E-10 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS11660 8c57af98f176cc051cdafbd75d271195 120 Pfam PF00034 Cytochrome c 25 118 5.5E-5 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS11660 8c57af98f176cc051cdafbd75d271195 120 SUPERFAMILY SSF46626 23 118 3.2E-11 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS11660 8c57af98f176cc051cdafbd75d271195 120 Gene3D G3DSA:1.10.760.10 25 119 4.3E-7 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS13340 d26f3a57b068c50c7cbdd782ed6ef6c4 184 SUPERFAMILY SSF53323 7 181 6.8E-33 T 22-04-2016 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 SMGD1_RS13340 d26f3a57b068c50c7cbdd782ed6ef6c4 184 PANTHER PTHR32154 6 181 5.6E-15 T 22-04-2016 SMGD1_RS13340 d26f3a57b068c50c7cbdd782ed6ef6c4 184 PANTHER PTHR32154:SF17 6 181 5.6E-15 T 22-04-2016 SMGD1_RS13340 d26f3a57b068c50c7cbdd782ed6ef6c4 184 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 12 175 6.4E-24 T 22-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 SMGD1_RS13340 d26f3a57b068c50c7cbdd782ed6ef6c4 184 Gene3D G3DSA:3.40.920.10 4 181 1.9E-26 T 22-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 SMGD1_RS12470 305c4227006f7f76bcf23b74bf4bc7d6 92 Gene3D G3DSA:1.10.760.10 18 87 1.7E-10 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS12470 305c4227006f7f76bcf23b74bf4bc7d6 92 SUPERFAMILY SSF46626 21 87 4.97E-9 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS00700 ec8a7a4a68616c9dee2edc058192faba 118 PANTHER PTHR23089:SF2 2 106 4.5E-43 T 22-04-2016 SMGD1_RS00700 ec8a7a4a68616c9dee2edc058192faba 118 ProSitePatterns PS00892 HIT domain signature. 82 100 - T 22-04-2016 IPR019808 Histidine triad, conserved site SMGD1_RS00700 ec8a7a4a68616c9dee2edc058192faba 118 SUPERFAMILY SSF54197 2 106 2.17E-33 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 SMGD1_RS00700 ec8a7a4a68616c9dee2edc058192faba 118 PANTHER PTHR23089 2 106 4.5E-43 T 22-04-2016 IPR001310 Histidine triad (HIT) protein SMGD1_RS00700 ec8a7a4a68616c9dee2edc058192faba 118 Pfam PF01230 HIT domain 10 103 2.8E-28 T 22-04-2016 IPR001310 Histidine triad (HIT) protein SMGD1_RS00700 ec8a7a4a68616c9dee2edc058192faba 118 Gene3D G3DSA:3.30.428.10 2 106 6.0E-37 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 SMGD1_RS00700 ec8a7a4a68616c9dee2edc058192faba 118 PRINTS PR00332 Histidine triad family signature 3 19 1.2E-18 T 22-04-2016 IPR001310 Histidine triad (HIT) protein SMGD1_RS00700 ec8a7a4a68616c9dee2edc058192faba 118 PRINTS PR00332 Histidine triad family signature 89 99 1.2E-18 T 22-04-2016 IPR001310 Histidine triad (HIT) protein SMGD1_RS00700 ec8a7a4a68616c9dee2edc058192faba 118 PRINTS PR00332 Histidine triad family signature 24 42 1.2E-18 T 22-04-2016 IPR001310 Histidine triad (HIT) protein SMGD1_RS05925 cc9b17d254340814c115b24eb961bb2b 720 Pfam PF08376 Nitrate and nitrite sensing 56 293 1.3E-40 T 22-04-2016 IPR013587 Nitrate/nitrite sensing protein SMGD1_RS05925 cc9b17d254340814c115b24eb961bb2b 720 SMART SM00283 388 629 8.7E-22 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SMGD1_RS05925 cc9b17d254340814c115b24eb961bb2b 720 Gene3D G3DSA:1.10.287.950 421 607 5.6E-44 T 22-04-2016 SMGD1_RS05925 cc9b17d254340814c115b24eb961bb2b 720 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 464 604 7.6E-37 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SMGD1_RS05925 cc9b17d254340814c115b24eb961bb2b 720 SUPERFAMILY SSF58104 352 634 2.09E-48 T 22-04-2016 SMGD1_RS05925 cc9b17d254340814c115b24eb961bb2b 720 Pfam PF13682 Chemoreceptor zinc-binding domain 616 678 2.4E-12 T 22-04-2016 IPR025991 Chemoreceptor zinc-binding domain UniPathway: UPA00599 SMGD1_RS05925 cc9b17d254340814c115b24eb961bb2b 720 PANTHER PTHR32089:SF1 296 607 2.1E-44 T 22-04-2016 SMGD1_RS05925 cc9b17d254340814c115b24eb961bb2b 720 PANTHER PTHR32089 296 607 2.1E-44 T 22-04-2016 SMGD1_RS13330 073f52c226c9615ff1ea07c5818130ad 377 SUPERFAMILY SSF52922 269 377 1.05E-25 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 SMGD1_RS13330 073f52c226c9615ff1ea07c5818130ad 377 PANTHER PTHR32154:SF14 2 186 2.0E-102 T 22-04-2016 SMGD1_RS13330 073f52c226c9615ff1ea07c5818130ad 377 PANTHER PTHR32154:SF14 215 377 2.0E-102 T 22-04-2016 SMGD1_RS13330 073f52c226c9615ff1ea07c5818130ad 377 PANTHER PTHR32154 2 186 2.0E-102 T 22-04-2016 SMGD1_RS13330 073f52c226c9615ff1ea07c5818130ad 377 PANTHER PTHR32154 215 377 2.0E-102 T 22-04-2016 SMGD1_RS13330 073f52c226c9615ff1ea07c5818130ad 377 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 277 370 1.7E-21 T 22-04-2016 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II SMGD1_RS13330 073f52c226c9615ff1ea07c5818130ad 377 Gene3D G3DSA:3.40.50.970 4 190 2.8E-68 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SMGD1_RS13330 073f52c226c9615ff1ea07c5818130ad 377 SUPERFAMILY SSF52518 6 259 2.53E-62 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SMGD1_RS13330 073f52c226c9615ff1ea07c5818130ad 377 Gene3D G3DSA:3.40.50.920 269 377 4.5E-22 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 SMGD1_RS13330 073f52c226c9615ff1ea07c5818130ad 377 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 17 251 4.4E-60 T 22-04-2016 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 SMGD1_RS13220 c2280a568c0816954b47cadacbf0f3f7 298 Pfam PF13144 Chaperone for flagella basal body P-ring formation 105 296 5.0E-27 T 22-04-2016 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal SMGD1_RS13220 c2280a568c0816954b47cadacbf0f3f7 298 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 164 297 1.7E-22 T 22-04-2016 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal SMGD1_RS11885 068a37c58f7a2d38adca5b26e508cc02 902 Gene3D G3DSA:2.70.150.10 21 61 1.1E-42 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SMGD1_RS11885 068a37c58f7a2d38adca5b26e508cc02 902 Gene3D G3DSA:2.70.150.10 115 230 1.1E-42 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SMGD1_RS11885 068a37c58f7a2d38adca5b26e508cc02 902 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 329 343 2.2E-42 T 22-04-2016 SMGD1_RS11885 068a37c58f7a2d38adca5b26e508cc02 902 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 636 655 2.2E-42 T 22-04-2016 SMGD1_RS11885 068a37c58f7a2d38adca5b26e508cc02 902 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 552 562 2.2E-42 T 22-04-2016 SMGD1_RS11885 068a37c58f7a2d38adca5b26e508cc02 902 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 660 672 2.2E-42 T 22-04-2016 SMGD1_RS11885 068a37c58f7a2d38adca5b26e508cc02 902 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 530 541 2.2E-42 T 22-04-2016 SMGD1_RS11885 068a37c58f7a2d38adca5b26e508cc02 902 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 167 181 2.2E-42 T 22-04-2016 SMGD1_RS11885 068a37c58f7a2d38adca5b26e508cc02 902 SUPERFAMILY SSF81665 230 323 7.72E-119 T 22-04-2016 SMGD1_RS11885 068a37c58f7a2d38adca5b26e508cc02 902 SUPERFAMILY SSF81665 686 892 7.72E-119 T 22-04-2016 SMGD1_RS11885 068a37c58f7a2d38adca5b26e508cc02 902 SUPERFAMILY SSF81665 7 120 7.72E-119 T 22-04-2016 SMGD1_RS11885 068a37c58f7a2d38adca5b26e508cc02 902 Pfam PF00702 haloacid dehalogenase-like hydrolase 325 650 2.2E-20 T 22-04-2016 SMGD1_RS11885 068a37c58f7a2d38adca5b26e508cc02 902 Gene3D G3DSA:1.20.1110.10 605 892 1.2E-109 T 22-04-2016 IPR023298 P-type ATPase, transmembrane domain SMGD1_RS11885 068a37c58f7a2d38adca5b26e508cc02 902 Gene3D G3DSA:1.20.1110.10 62 114 1.2E-109 T 22-04-2016 IPR023298 P-type ATPase, transmembrane domain SMGD1_RS11885 068a37c58f7a2d38adca5b26e508cc02 902 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 331 337 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site SMGD1_RS11885 068a37c58f7a2d38adca5b26e508cc02 902 PANTHER PTHR24093 7 899 4.9E-303 T 22-04-2016 SMGD1_RS11885 068a37c58f7a2d38adca5b26e508cc02 902 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 668 693 3.3E-21 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 SMGD1_RS11885 068a37c58f7a2d38adca5b26e508cc02 902 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 608 624 3.3E-21 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 SMGD1_RS11885 068a37c58f7a2d38adca5b26e508cc02 902 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 636 652 3.3E-21 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 SMGD1_RS11885 068a37c58f7a2d38adca5b26e508cc02 902 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 872 893 3.3E-21 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 SMGD1_RS11885 068a37c58f7a2d38adca5b26e508cc02 902 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 490 508 3.3E-21 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 SMGD1_RS11885 068a37c58f7a2d38adca5b26e508cc02 902 Gene3D G3DSA:3.40.1110.10 319 537 6.1E-59 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 SMGD1_RS11885 068a37c58f7a2d38adca5b26e508cc02 902 Pfam PF00122 E1-E2 ATPase 88 320 2.0E-69 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SMGD1_RS11885 068a37c58f7a2d38adca5b26e508cc02 902 SMART SM00831 8 82 2.4E-21 T 22-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal SMGD1_RS11885 068a37c58f7a2d38adca5b26e508cc02 902 SUPERFAMILY SSF81653 120 229 8.24E-31 T 22-04-2016 SMGD1_RS11885 068a37c58f7a2d38adca5b26e508cc02 902 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 607 726 3.6E-36 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 SMGD1_RS11885 068a37c58f7a2d38adca5b26e508cc02 902 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 88 351 2.8E-46 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 SMGD1_RS11885 068a37c58f7a2d38adca5b26e508cc02 902 SUPERFAMILY SSF56784 327 347 2.31E-60 T 22-04-2016 IPR023214 HAD-like domain SMGD1_RS11885 068a37c58f7a2d38adca5b26e508cc02 902 SUPERFAMILY SSF56784 487 741 2.31E-60 T 22-04-2016 IPR023214 HAD-like domain SMGD1_RS11885 068a37c58f7a2d38adca5b26e508cc02 902 SUPERFAMILY SSF81660 336 534 5.45E-53 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 SMGD1_RS11885 068a37c58f7a2d38adca5b26e508cc02 902 Pfam PF00689 Cation transporting ATPase, C-terminus 721 892 3.7E-39 T 22-04-2016 IPR006068 Cation-transporting P-type ATPase, C-terminal SMGD1_RS11885 068a37c58f7a2d38adca5b26e508cc02 902 Pfam PF00690 Cation transporter/ATPase, N-terminus 9 76 1.4E-13 T 22-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal SMGD1_RS13485 057c49561a9e9dc261126c979b76c56f 224 PANTHER PTHR11587:SF3 1 224 1.9E-82 T 22-04-2016 SMGD1_RS13485 057c49561a9e9dc261126c979b76c56f 224 Pfam PF06508 Queuosine biosynthesis protein QueC 7 214 8.4E-76 T 22-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 SMGD1_RS13485 057c49561a9e9dc261126c979b76c56f 224 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 6 221 52.325 T 22-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 SMGD1_RS13485 057c49561a9e9dc261126c979b76c56f 224 PANTHER PTHR11587 1 224 1.9E-82 T 22-04-2016 SMGD1_RS13485 057c49561a9e9dc261126c979b76c56f 224 PIRSF PIRSF006293 4 224 1.2E-79 T 22-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 SMGD1_RS13485 057c49561a9e9dc261126c979b76c56f 224 Gene3D G3DSA:3.40.50.620 5 223 3.1E-87 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMGD1_RS13485 057c49561a9e9dc261126c979b76c56f 224 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 8 208 4.7E-63 T 22-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 SMGD1_RS13485 057c49561a9e9dc261126c979b76c56f 224 SUPERFAMILY SSF52402 5 223 6.62E-63 T 22-04-2016 SMGD1_RS08130 35f46c65aa74e65b6199489750433422 415 PANTHER PTHR10799 126 407 1.2E-43 T 22-04-2016 SMGD1_RS08130 35f46c65aa74e65b6199489750433422 415 Pfam PF08448 PAS fold 132 242 7.7E-18 T 22-04-2016 IPR013656 PAS fold-4 SMGD1_RS08130 35f46c65aa74e65b6199489750433422 415 SUPERFAMILY SSF55785 130 242 1.43E-23 T 22-04-2016 IPR000014 PAS domain SMGD1_RS08130 35f46c65aa74e65b6199489750433422 415 Gene3D G3DSA:3.30.450.20 115 237 4.6E-23 T 22-04-2016 SMGD1_RS08130 35f46c65aa74e65b6199489750433422 415 SUPERFAMILY SSF55785 19 84 2.97E-6 T 22-04-2016 IPR000014 PAS domain SMGD1_RS08130 35f46c65aa74e65b6199489750433422 415 SUPERFAMILY SSF55073 256 414 1.65E-49 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS08130 35f46c65aa74e65b6199489750433422 415 Pfam PF00990 Diguanylate cyclase, GGDEF domain 251 407 7.7E-50 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS08130 35f46c65aa74e65b6199489750433422 415 PANTHER PTHR10799:SF774 126 407 1.2E-43 T 22-04-2016 SMGD1_RS08130 35f46c65aa74e65b6199489750433422 415 Gene3D G3DSA:3.30.450.20 20 104 9.3E-7 T 22-04-2016 SMGD1_RS08130 35f46c65aa74e65b6199489750433422 415 SMART SM00091 125 191 1.3E-8 T 22-04-2016 IPR000014 PAS domain SMGD1_RS08130 35f46c65aa74e65b6199489750433422 415 SMART SM00091 4 70 90.0 T 22-04-2016 IPR000014 PAS domain SMGD1_RS08130 35f46c65aa74e65b6199489750433422 415 Gene3D G3DSA:3.30.70.270 253 414 1.0E-55 T 22-04-2016 SMGD1_RS08130 35f46c65aa74e65b6199489750433422 415 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 248 410 6.2E-43 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS08130 35f46c65aa74e65b6199489750433422 415 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 125 247 8.5E-19 T 22-04-2016 IPR000014 PAS domain SMGD1_RS08130 35f46c65aa74e65b6199489750433422 415 SMART SM00267 240 412 2.3E-62 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS08130 35f46c65aa74e65b6199489750433422 415 Pfam PF13426 PAS domain 20 85 0.19 T 22-04-2016 IPR000014 PAS domain SMGD1_RS10445 1cb272e269adbeba36daeafcffb04d9d 483 PANTHER PTHR24423 257 483 4.7E-40 T 22-04-2016 SMGD1_RS10445 1cb272e269adbeba36daeafcffb04d9d 483 PANTHER PTHR24423 1 8 4.7E-40 T 22-04-2016 SMGD1_RS10445 1cb272e269adbeba36daeafcffb04d9d 483 Pfam PF11845 Protein of unknown function (DUF3365) 17 205 1.0E-26 T 22-04-2016 IPR021796 Protein of unknown function DUF3365 SMGD1_RS10445 1cb272e269adbeba36daeafcffb04d9d 483 Gene3D G3DSA:1.10.287.130 258 314 2.0E-5 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS10445 1cb272e269adbeba36daeafcffb04d9d 483 SUPERFAMILY SSF55874 327 479 2.62E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS10445 1cb272e269adbeba36daeafcffb04d9d 483 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 370 479 1.3E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS10445 1cb272e269adbeba36daeafcffb04d9d 483 SMART SM00388 259 329 2.8E-5 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS10445 1cb272e269adbeba36daeafcffb04d9d 483 Gene3D G3DSA:3.30.565.10 315 480 8.3E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS10445 1cb272e269adbeba36daeafcffb04d9d 483 SUPERFAMILY SSF47384 254 327 1.04E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS10445 1cb272e269adbeba36daeafcffb04d9d 483 SMART SM00387 369 481 1.2E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS10445 1cb272e269adbeba36daeafcffb04d9d 483 PRINTS PR00344 Bacterial sensor protein C-terminal signature 465 478 5.6E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS10445 1cb272e269adbeba36daeafcffb04d9d 483 PRINTS PR00344 Bacterial sensor protein C-terminal signature 428 438 5.6E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS10445 1cb272e269adbeba36daeafcffb04d9d 483 PRINTS PR00344 Bacterial sensor protein C-terminal signature 441 459 5.6E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS10445 1cb272e269adbeba36daeafcffb04d9d 483 PRINTS PR00344 Bacterial sensor protein C-terminal signature 410 424 5.6E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS04925 0c8424153e6aec573d438469b3e442bf 281 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 274 2.9E-127 T 22-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 SMGD1_RS04925 0c8424153e6aec573d438469b3e442bf 281 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 274 44.399 T 22-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 SMGD1_RS04925 0c8424153e6aec573d438469b3e442bf 281 SUPERFAMILY SSF50104 128 273 4.09E-58 T 22-04-2016 IPR008991 Translation protein SH3-like domain SMGD1_RS04925 0c8424153e6aec573d438469b3e442bf 281 PIRSF PIRSF002158 4 276 2.1E-92 T 22-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS04925 0c8424153e6aec573d438469b3e442bf 281 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 126 251 8.5E-53 T 22-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 SMGD1_RS04925 0c8424153e6aec573d438469b3e442bf 281 PANTHER PTHR13691 1 281 1.0E-122 T 22-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS04925 0c8424153e6aec573d438469b3e442bf 281 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 118 7.4E-31 T 22-04-2016 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS04925 0c8424153e6aec573d438469b3e442bf 281 SMART SM01383 42 118 1.8E-43 T 22-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS04925 0c8424153e6aec573d438469b3e442bf 281 SUPERFAMILY SSF50249 2 119 4.46E-43 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMGD1_RS04925 0c8424153e6aec573d438469b3e442bf 281 Gene3D G3DSA:2.40.50.140 1 114 8.9E-46 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMGD1_RS04925 0c8424153e6aec573d438469b3e442bf 281 Gene3D G3DSA:4.10.950.10 197 273 5.1E-32 T 22-04-2016 IPR014726 Ribosomal protein L2, domain 3 SMGD1_RS04925 0c8424153e6aec573d438469b3e442bf 281 ProSitePatterns PS00467 Ribosomal protein L2 signature. 219 230 - T 22-04-2016 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 SMGD1_RS04925 0c8424153e6aec573d438469b3e442bf 281 Gene3D G3DSA:2.30.30.30 123 196 6.6E-31 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 SMGD1_RS04925 0c8424153e6aec573d438469b3e442bf 281 PANTHER PTHR13691:SF5 1 281 1.0E-122 T 22-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 SMGD1_RS04925 0c8424153e6aec573d438469b3e442bf 281 SMART SM01382 125 253 1.0E-84 T 22-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 SMGD1_RS13470 99f9f477892573e4a69bac7127d8415e 377 PANTHER PTHR33376:SF5 48 364 5.1E-113 T 22-04-2016 SMGD1_RS13470 99f9f477892573e4a69bac7127d8415e 377 PIRSF PIRSF039026 1 377 4.9E-138 T 22-04-2016 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like SMGD1_RS13470 99f9f477892573e4a69bac7127d8415e 377 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 60 341 3.7E-58 T 22-04-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 SMGD1_RS13470 99f9f477892573e4a69bac7127d8415e 377 PANTHER PTHR33376 48 364 5.1E-113 T 22-04-2016 SMGD1_RS10385 57234767f5eb9b89e594608b6ec9709f 276 SUPERFAMILY SSF55874 170 274 7.33E-24 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS10385 57234767f5eb9b89e594608b6ec9709f 276 PANTHER PTHR24423:SF394 62 273 3.2E-26 T 22-04-2016 SMGD1_RS10385 57234767f5eb9b89e594608b6ec9709f 276 Gene3D G3DSA:3.30.565.10 154 275 7.3E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS10385 57234767f5eb9b89e594608b6ec9709f 276 PANTHER PTHR24423 62 273 3.2E-26 T 22-04-2016 SMGD1_RS10385 57234767f5eb9b89e594608b6ec9709f 276 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 174 275 2.2E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS10385 57234767f5eb9b89e594608b6ec9709f 276 SMART SM00387 173 276 4.3E-16 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS10385 57234767f5eb9b89e594608b6ec9709f 276 PRINTS PR00344 Bacterial sensor protein C-terminal signature 206 220 1.4E-6 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS10385 57234767f5eb9b89e594608b6ec9709f 276 PRINTS PR00344 Bacterial sensor protein C-terminal signature 237 255 1.4E-6 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS10385 57234767f5eb9b89e594608b6ec9709f 276 PRINTS PR00344 Bacterial sensor protein C-terminal signature 261 274 1.4E-6 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS10385 57234767f5eb9b89e594608b6ec9709f 276 PRINTS PR00344 Bacterial sensor protein C-terminal signature 224 234 1.4E-6 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS02435 fe84cbd57ade06199a644b4652793634 401 Gene3D G3DSA:3.50.50.60 144 218 2.2E-25 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS02435 fe84cbd57ade06199a644b4652793634 401 Gene3D G3DSA:3.50.50.60 4 89 2.2E-25 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS02435 fe84cbd57ade06199a644b4652793634 401 PANTHER PTHR13847:SF191 1 397 3.3E-99 T 22-04-2016 SMGD1_RS02435 fe84cbd57ade06199a644b4652793634 401 Gene3D G3DSA:3.30.9.10 96 143 1.0E-5 T 22-04-2016 SMGD1_RS02435 fe84cbd57ade06199a644b4652793634 401 Gene3D G3DSA:3.30.9.10 221 279 1.0E-5 T 22-04-2016 SMGD1_RS02435 fe84cbd57ade06199a644b4652793634 401 SUPERFAMILY SSF51905 7 220 1.9E-34 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS02435 fe84cbd57ade06199a644b4652793634 401 PANTHER PTHR13847 1 397 3.3E-99 T 22-04-2016 SMGD1_RS02435 fe84cbd57ade06199a644b4652793634 401 Pfam PF01266 FAD dependent oxidoreductase 8 397 1.3E-52 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 SMGD1_RS10415 abeed2071d4fddd5b755fa63eedc1fe2 856 Pfam PF11940 Domain of unknown function (DUF3458) 458 808 2.6E-103 T 22-04-2016 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal SMGD1_RS10415 abeed2071d4fddd5b755fa63eedc1fe2 856 Gene3D G3DSA:1.10.390.10 309 452 4.7E-33 T 22-04-2016 SMGD1_RS10415 abeed2071d4fddd5b755fa63eedc1fe2 856 SUPERFAMILY SSF55486 206 452 4.4E-74 T 22-04-2016 SMGD1_RS10415 abeed2071d4fddd5b755fa63eedc1fe2 856 SUPERFAMILY SSF63737 3 194 3.4E-41 T 22-04-2016 SMGD1_RS10415 abeed2071d4fddd5b755fa63eedc1fe2 856 Gene3D G3DSA:1.25.50.10 536 852 5.8E-95 T 22-04-2016 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal SMGD1_RS10415 abeed2071d4fddd5b755fa63eedc1fe2 856 Pfam PF01433 Peptidase family M1 44 385 2.7E-69 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 SMGD1_RS10415 abeed2071d4fddd5b755fa63eedc1fe2 856 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 11 851 0.0 T 22-04-2016 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 SMGD1_RS10415 abeed2071d4fddd5b755fa63eedc1fe2 856 PANTHER PTHR11533:SF152 1 855 0.0 T 22-04-2016 SMGD1_RS10415 abeed2071d4fddd5b755fa63eedc1fe2 856 PANTHER PTHR11533 1 855 0.0 T 22-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 SMGD1_RS10415 abeed2071d4fddd5b755fa63eedc1fe2 856 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 177 192 1.8E-11 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 SMGD1_RS10415 abeed2071d4fddd5b755fa63eedc1fe2 856 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 259 269 1.8E-11 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 SMGD1_RS10415 abeed2071d4fddd5b755fa63eedc1fe2 856 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 314 326 1.8E-11 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 SMGD1_RS10415 abeed2071d4fddd5b755fa63eedc1fe2 856 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 295 310 1.8E-11 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 SMGD1_RS10415 abeed2071d4fddd5b755fa63eedc1fe2 856 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 127 142 1.8E-11 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 SMGD1_RS01880 99ee98d00cd09de29109874c7b1d7c18 452 SUPERFAMILY SSF50341 160 293 1.83E-23 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SMGD1_RS01880 99ee98d00cd09de29109874c7b1d7c18 452 PANTHER PTHR22617 314 451 3.7E-20 T 22-04-2016 SMGD1_RS01880 99ee98d00cd09de29109874c7b1d7c18 452 Gene3D G3DSA:2.30.30.40 238 285 8.6E-4 T 22-04-2016 SMGD1_RS01880 99ee98d00cd09de29109874c7b1d7c18 452 SMART SM00260 319 450 2.7E-19 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SMGD1_RS01880 99ee98d00cd09de29109874c7b1d7c18 452 SMART SM00260 160 294 3.4E-14 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SMGD1_RS01880 99ee98d00cd09de29109874c7b1d7c18 452 SMART SM00260 1 134 0.01 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SMGD1_RS01880 99ee98d00cd09de29109874c7b1d7c18 452 SUPERFAMILY SSF50341 2 137 1.7E-15 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SMGD1_RS01880 99ee98d00cd09de29109874c7b1d7c18 452 Pfam PF01584 CheW-like domain 6 136 4.5E-10 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SMGD1_RS01880 99ee98d00cd09de29109874c7b1d7c18 452 Pfam PF01584 CheW-like domain 323 451 3.0E-24 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SMGD1_RS01880 99ee98d00cd09de29109874c7b1d7c18 452 Pfam PF01584 CheW-like domain 164 287 6.9E-22 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SMGD1_RS01880 99ee98d00cd09de29109874c7b1d7c18 452 Gene3D G3DSA:2.40.50.180 204 237 3.9E-6 T 22-04-2016 SMGD1_RS01880 99ee98d00cd09de29109874c7b1d7c18 452 Gene3D G3DSA:2.40.50.180 350 406 9.4E-9 T 22-04-2016 SMGD1_RS01880 99ee98d00cd09de29109874c7b1d7c18 452 SUPERFAMILY SSF50341 318 451 2.75E-25 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SMGD1_RS01965 7a59f5fcd78c93d208fb5245d8fbde58 637 SUPERFAMILY SSF55124 308 363 1.2E-8 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 SMGD1_RS01965 7a59f5fcd78c93d208fb5245d8fbde58 637 SUPERFAMILY SSF56014 382 516 1.3E-19 T 22-04-2016 SMGD1_RS01965 7a59f5fcd78c93d208fb5245d8fbde58 637 SUPERFAMILY SSF56014 138 295 2.49E-28 T 22-04-2016 SMGD1_RS01965 7a59f5fcd78c93d208fb5245d8fbde58 637 SUPERFAMILY SSF55124 12 132 8.01E-30 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 SMGD1_RS01965 7a59f5fcd78c93d208fb5245d8fbde58 637 PANTHER PTHR32439 10 528 3.3E-111 T 22-04-2016 SMGD1_RS01965 7a59f5fcd78c93d208fb5245d8fbde58 637 Gene3D G3DSA:3.30.413.10 138 294 1.1E-23 T 22-04-2016 SMGD1_RS01965 7a59f5fcd78c93d208fb5245d8fbde58 637 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 312 363 2.7E-6 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 SMGD1_RS01965 7a59f5fcd78c93d208fb5245d8fbde58 637 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 68 127 2.6E-11 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 SMGD1_RS01965 7a59f5fcd78c93d208fb5245d8fbde58 637 PANTHER PTHR32439:SF0 10 528 3.3E-111 T 22-04-2016 SMGD1_RS01965 7a59f5fcd78c93d208fb5245d8fbde58 637 Gene3D G3DSA:3.30.413.10 386 516 2.4E-14 T 22-04-2016 SMGD1_RS01965 7a59f5fcd78c93d208fb5245d8fbde58 637 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 389 480 1.5 T 22-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 SMGD1_RS01965 7a59f5fcd78c93d208fb5245d8fbde58 637 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 138 288 2.2E-20 T 22-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 SMGD1_RS01965 7a59f5fcd78c93d208fb5245d8fbde58 637 Gene3D G3DSA:3.90.480.10 303 363 4.3E-26 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 SMGD1_RS01965 7a59f5fcd78c93d208fb5245d8fbde58 637 Gene3D G3DSA:3.90.480.10 67 134 4.3E-26 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 SMGD1_RS09620 65c5269cac837cbd1b8e9535ae24d28c 420 SUPERFAMILY SSF55205 1 419 7.36E-130 T 22-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 SMGD1_RS09620 65c5269cac837cbd1b8e9535ae24d28c 420 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 8 408 3.1E-92 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 SMGD1_RS09620 65c5269cac837cbd1b8e9535ae24d28c 420 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 418 43.012 T 22-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SMGD1_RS09620 65c5269cac837cbd1b8e9535ae24d28c 420 Gene3D G3DSA:3.65.10.10 222 417 1.6E-54 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 SMGD1_RS09620 65c5269cac837cbd1b8e9535ae24d28c 420 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 417 4.8E-171 T 22-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SMGD1_RS09620 65c5269cac837cbd1b8e9535ae24d28c 420 Gene3D G3DSA:3.65.10.10 21 219 1.2E-61 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 SMGD1_RS09620 65c5269cac837cbd1b8e9535ae24d28c 420 PANTHER PTHR21090 1 417 2.4E-170 T 22-04-2016 SMGD1_RS11690 3ca50afdd67528a1a52dbefc10387f61 155 PANTHER PTHR40114 2 154 4.3E-44 T 22-04-2016 SMGD1_RS11690 3ca50afdd67528a1a52dbefc10387f61 155 Gene3D G3DSA:2.40.320.10 1 151 1.5E-53 T 22-04-2016 IPR023577 CYTH domain SMGD1_RS11690 3ca50afdd67528a1a52dbefc10387f61 155 PIRSF PIRSF016487 1 155 8.3E-57 T 22-04-2016 IPR012042 Inorganic triphosphatase NeuTTM/CthTTM-like SMGD1_RS11690 3ca50afdd67528a1a52dbefc10387f61 155 Pfam PF01928 CYTH domain 3 142 2.7E-13 T 22-04-2016 IPR023577 CYTH domain SMGD1_RS11690 3ca50afdd67528a1a52dbefc10387f61 155 SUPERFAMILY SSF55154 1 148 2.45E-40 T 22-04-2016 IPR033469 CYTH-like domain SMGD1_RS11690 3ca50afdd67528a1a52dbefc10387f61 155 SMART SM01118 2 148 1.4E-20 T 22-04-2016 IPR023577 CYTH domain SMGD1_RS11795 09ad1672a1d86ffe3c213eb27b75ff17 506 SUPERFAMILY SSF103190 56 183 6.8E-11 T 22-04-2016 IPR029151 Periplasmic sensor domain-like SMGD1_RS11795 09ad1672a1d86ffe3c213eb27b75ff17 506 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 338 503 1.8E-43 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS11795 09ad1672a1d86ffe3c213eb27b75ff17 506 SUPERFAMILY SSF55073 345 504 1.33E-41 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS11795 09ad1672a1d86ffe3c213eb27b75ff17 506 Pfam PF14827 Double sensory domain of two-component sensor kinase 65 290 3.6E-15 T 22-04-2016 IPR029150 Double Cache domain 3 SMGD1_RS11795 09ad1672a1d86ffe3c213eb27b75ff17 506 PANTHER PTHR10799:SF750 373 502 6.0E-19 T 22-04-2016 SMGD1_RS11795 09ad1672a1d86ffe3c213eb27b75ff17 506 PANTHER PTHR10799:SF750 1 89 6.0E-19 T 22-04-2016 SMGD1_RS11795 09ad1672a1d86ffe3c213eb27b75ff17 506 Pfam PF00990 Diguanylate cyclase, GGDEF domain 342 501 4.5E-41 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS11795 09ad1672a1d86ffe3c213eb27b75ff17 506 PANTHER PTHR10799 373 502 6.0E-19 T 22-04-2016 SMGD1_RS11795 09ad1672a1d86ffe3c213eb27b75ff17 506 PANTHER PTHR10799 1 89 6.0E-19 T 22-04-2016 SMGD1_RS11795 09ad1672a1d86ffe3c213eb27b75ff17 506 SMART SM00267 329 505 1.6E-40 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS11795 09ad1672a1d86ffe3c213eb27b75ff17 506 Gene3D G3DSA:3.30.70.270 343 504 6.6E-46 T 22-04-2016 SMGD1_RS03910 77a8f7b213c66fa992daf9582c261b75 682 Gene3D G3DSA:3.40.50.300 539 620 1.1E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS03910 77a8f7b213c66fa992daf9582c261b75 682 Gene3D G3DSA:3.40.50.300 278 379 1.1E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS03910 77a8f7b213c66fa992daf9582c261b75 682 Gene3D G3DSA:1.10.486.10 380 529 2.7E-32 T 22-04-2016 SMGD1_RS03910 77a8f7b213c66fa992daf9582c261b75 682 SUPERFAMILY SSF52540 1 619 9.61E-150 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS03910 77a8f7b213c66fa992daf9582c261b75 682 Pfam PF13361 UvrD-like helicase C-terminal domain 270 598 3.2E-67 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 SMGD1_RS03910 77a8f7b213c66fa992daf9582c261b75 682 PANTHER PTHR11070 1 619 1.4E-159 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 SMGD1_RS03910 77a8f7b213c66fa992daf9582c261b75 682 Gene3D G3DSA:1.10.10.160 112 179 3.6E-15 T 22-04-2016 IPR013986 DExx box DNA helicase domain SMGD1_RS03910 77a8f7b213c66fa992daf9582c261b75 682 Gene3D G3DSA:3.40.50.300 181 277 4.5E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS03910 77a8f7b213c66fa992daf9582c261b75 682 Gene3D G3DSA:3.40.50.300 1 109 4.5E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS03910 77a8f7b213c66fa992daf9582c261b75 682 Pfam PF00580 UvrD/REP helicase N-terminal domain 132 264 2.0E-41 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 SMGD1_RS03910 77a8f7b213c66fa992daf9582c261b75 682 Pfam PF00580 UvrD/REP helicase N-terminal domain 8 122 5.4E-26 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 SMGD1_RS00610 cc8b366f8fca83414aaca96d00cadf78 298 PANTHER PTHR30074 46 298 6.0E-20 T 22-04-2016 SMGD1_RS00610 cc8b366f8fca83414aaca96d00cadf78 298 Pfam PF01292 Prokaryotic cytochrome b561 94 274 4.3E-20 T 22-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 SMGD1_RS00610 cc8b366f8fca83414aaca96d00cadf78 298 PANTHER PTHR30074:SF2 46 298 6.0E-20 T 22-04-2016 SMGD1_RS00610 cc8b366f8fca83414aaca96d00cadf78 298 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 90 295 5.9E-62 T 22-04-2016 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 SMGD1_RS00610 cc8b366f8fca83414aaca96d00cadf78 298 Gene3D G3DSA:1.20.950.20 87 297 5.1E-52 T 22-04-2016 SMGD1_RS00610 cc8b366f8fca83414aaca96d00cadf78 298 SUPERFAMILY SSF81342 87 296 1.73E-37 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 SMGD1_RS06500 68811e3f67df46e11f3045559d87e116 245 Pfam PF13183 4Fe-4S dicluster domain 132 203 3.8E-12 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SMGD1_RS06500 68811e3f67df46e11f3045559d87e116 245 Gene3D G3DSA:3.10.20.30 1 88 6.6E-26 T 22-04-2016 IPR012675 Beta-grasp domain SMGD1_RS06500 68811e3f67df46e11f3045559d87e116 245 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 2 101 2.3E-27 T 22-04-2016 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 SMGD1_RS06500 68811e3f67df46e11f3045559d87e116 245 SUPERFAMILY SSF54292 3 96 4.02E-19 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 SMGD1_RS06500 68811e3f67df46e11f3045559d87e116 245 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 189 200 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SMGD1_RS06500 68811e3f67df46e11f3045559d87e116 245 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 134 145 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SMGD1_RS06500 68811e3f67df46e11f3045559d87e116 245 PANTHER PTHR11921 1 214 1.0E-53 T 22-04-2016 SMGD1_RS06500 68811e3f67df46e11f3045559d87e116 245 PANTHER PTHR11921:SF12 1 214 1.0E-53 T 22-04-2016 SMGD1_RS06500 68811e3f67df46e11f3045559d87e116 245 SUPERFAMILY SSF46548 123 218 1.92E-22 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 SMGD1_RS06500 68811e3f67df46e11f3045559d87e116 245 Gene3D G3DSA:1.10.1060.10 89 221 6.2E-26 T 22-04-2016 SMGD1_RS06500 68811e3f67df46e11f3045559d87e116 245 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 5 213 7.1E-56 T 22-04-2016 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 SMGD1_RS11005 5cf586fe923a9c3eab6d1555c23273ff 288 SUPERFAMILY SSF101801 205 286 2.88E-22 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) SMGD1_RS11005 5cf586fe923a9c3eab6d1555c23273ff 288 SUPERFAMILY SSF103039 29 165 8.2E-14 T 22-04-2016 IPR028976 CheC-like domain SMGD1_RS11005 5cf586fe923a9c3eab6d1555c23273ff 288 PANTHER PTHR30034:SF1 1 288 1.5E-16 T 22-04-2016 SMGD1_RS11005 5cf586fe923a9c3eab6d1555c23273ff 288 Gene3D G3DSA:2.30.330.10 199 287 2.1E-30 T 22-04-2016 SMGD1_RS11005 5cf586fe923a9c3eab6d1555c23273ff 288 PRINTS PR00956 Flagellar motor switch protein FliN signature 207 223 2.07E-19 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 SMGD1_RS11005 5cf586fe923a9c3eab6d1555c23273ff 288 PRINTS PR00956 Flagellar motor switch protein FliN signature 240 253 2.07E-19 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 SMGD1_RS11005 5cf586fe923a9c3eab6d1555c23273ff 288 PRINTS PR00956 Flagellar motor switch protein FliN signature 253 268 2.07E-19 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 SMGD1_RS11005 5cf586fe923a9c3eab6d1555c23273ff 288 PRINTS PR00956 Flagellar motor switch protein FliN signature 224 240 2.07E-19 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 SMGD1_RS11005 5cf586fe923a9c3eab6d1555c23273ff 288 Gene3D G3DSA:3.40.1550.10 41 162 7.7E-8 T 22-04-2016 IPR028976 CheC-like domain SMGD1_RS11005 5cf586fe923a9c3eab6d1555c23273ff 288 PANTHER PTHR30034 1 288 1.5E-16 T 22-04-2016 SMGD1_RS11005 5cf586fe923a9c3eab6d1555c23273ff 288 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 204 279 1.1E-27 T 22-04-2016 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 SMGD1_RS11005 5cf586fe923a9c3eab6d1555c23273ff 288 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 207 276 2.6E-22 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) SMGD1_RS08405 addfd67b7ce9e3fe657369a8daa47d35 268 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 61 180 1.6E-37 T 22-04-2016 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 SMGD1_RS08405 addfd67b7ce9e3fe657369a8daa47d35 268 PANTHER PTHR10884:SF6 54 180 1.2E-39 T 22-04-2016 SMGD1_RS08405 addfd67b7ce9e3fe657369a8daa47d35 268 PANTHER PTHR10884 54 180 1.2E-39 T 22-04-2016 SMGD1_RS08405 addfd67b7ce9e3fe657369a8daa47d35 268 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 63 181 6.2E-35 T 22-04-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 SMGD1_RS08405 addfd67b7ce9e3fe657369a8daa47d35 268 SUPERFAMILY SSF143243 43 195 8.89E-43 T 22-04-2016 SMGD1_RS08405 addfd67b7ce9e3fe657369a8daa47d35 268 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 114 176 9.0E-30 T 22-04-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 SMGD1_RS08405 addfd67b7ce9e3fe657369a8daa47d35 268 ProSitePatterns PS00542 Respiratory chain NADH dehydrogenase 30 Kd subunit signature. 141 162 - T 22-04-2016 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site GO:0016651|GO:0055114 SMGD1_RS05920 6fa10d4f55531745766fa4111efcb527 477 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 255 266 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SMGD1_RS05920 6fa10d4f55531745766fa4111efcb527 477 Gene3D G3DSA:3.30.70.20 200 257 1.8E-4 T 22-04-2016 SMGD1_RS05920 6fa10d4f55531745766fa4111efcb527 477 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 14 467 2.8E-135 T 22-04-2016 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021 SMGD1_RS05920 6fa10d4f55531745766fa4111efcb527 477 Gene3D G3DSA:3.30.70.20 258 291 1.6E-4 T 22-04-2016 SMGD1_RS05920 6fa10d4f55531745766fa4111efcb527 477 Pfam PF13746 4Fe-4S dicluster domain 195 306 2.6E-50 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SMGD1_RS05920 6fa10d4f55531745766fa4111efcb527 477 PANTHER PTHR24960 14 231 8.1E-33 T 22-04-2016 SMGD1_RS05920 6fa10d4f55531745766fa4111efcb527 477 PANTHER PTHR24960 247 380 8.1E-33 T 22-04-2016 SMGD1_RS05920 6fa10d4f55531745766fa4111efcb527 477 Gene3D G3DSA:2.60.40.10 368 469 6.0E-5 T 22-04-2016 IPR013783 Immunoglobulin-like fold SMGD1_RS05920 6fa10d4f55531745766fa4111efcb527 477 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 339 468 8.6E-19 T 22-04-2016 IPR032879 FixG, C-terminal immunoglobulin-like domain SMGD1_RS05920 6fa10d4f55531745766fa4111efcb527 477 Pfam PF12801 4Fe-4S binding domain 67 111 7.6E-15 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SMGD1_RS05920 6fa10d4f55531745766fa4111efcb527 477 PANTHER PTHR24960:SF45 14 231 8.1E-33 T 22-04-2016 SMGD1_RS05920 6fa10d4f55531745766fa4111efcb527 477 PANTHER PTHR24960:SF45 247 380 8.1E-33 T 22-04-2016 SMGD1_RS05920 6fa10d4f55531745766fa4111efcb527 477 SUPERFAMILY SSF54862 79 100 5.23E-21 T 22-04-2016 SMGD1_RS05920 6fa10d4f55531745766fa4111efcb527 477 SUPERFAMILY SSF54862 255 316 5.23E-21 T 22-04-2016 SMGD1_RS05920 6fa10d4f55531745766fa4111efcb527 477 SUPERFAMILY SSF54862 163 227 5.23E-21 T 22-04-2016 SMGD1_RS03975 cf08d9a368cc4bbf5f118773fe9e795a 221 PANTHER PTHR31299 7 192 1.8E-25 T 22-04-2016 SMGD1_RS03975 cf08d9a368cc4bbf5f118773fe9e795a 221 Gene3D G3DSA:3.40.50.2020 102 191 2.0E-11 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SMGD1_RS03975 cf08d9a368cc4bbf5f118773fe9e795a 221 Gene3D G3DSA:3.40.50.2020 13 67 2.0E-11 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SMGD1_RS03975 cf08d9a368cc4bbf5f118773fe9e795a 221 SUPERFAMILY SSF53271 9 216 5.68E-29 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SMGD1_RS03975 cf08d9a368cc4bbf5f118773fe9e795a 221 Pfam PF00156 Phosphoribosyl transferase domain 29 175 4.7E-7 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 SMGD1_RS08420 0a7220305ba74058cf4358826095cf79 664 PANTHER PTHR11938:SF99 169 596 1.8E-83 T 22-04-2016 SMGD1_RS08420 0a7220305ba74058cf4358826095cf79 664 Gene3D G3DSA:3.40.50.720 515 610 7.9E-28 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS08420 0a7220305ba74058cf4358826095cf79 664 Gene3D G3DSA:3.40.50.720 266 351 7.9E-28 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS08420 0a7220305ba74058cf4358826095cf79 664 SMART SM00928 57 107 8.0E-6 T 22-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 SMGD1_RS08420 0a7220305ba74058cf4358826095cf79 664 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 168 247 6.5E-19 T 22-04-2016 IPR028261 Dihydroprymidine dehydrogenase domain II SMGD1_RS08420 0a7220305ba74058cf4358826095cf79 664 PRINTS PR00419 Adrenodoxin reductase family signature 287 300 2.7E-16 T 22-04-2016 SMGD1_RS08420 0a7220305ba74058cf4358826095cf79 664 PRINTS PR00419 Adrenodoxin reductase family signature 329 339 2.7E-16 T 22-04-2016 SMGD1_RS08420 0a7220305ba74058cf4358826095cf79 664 PRINTS PR00419 Adrenodoxin reductase family signature 403 417 2.7E-16 T 22-04-2016 SMGD1_RS08420 0a7220305ba74058cf4358826095cf79 664 PRINTS PR00419 Adrenodoxin reductase family signature 264 286 2.7E-16 T 22-04-2016 SMGD1_RS08420 0a7220305ba74058cf4358826095cf79 664 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 73 145 1.7E-18 T 22-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 SMGD1_RS08420 0a7220305ba74058cf4358826095cf79 664 SUPERFAMILY SSF140490 57 157 2.62E-22 T 22-04-2016 SMGD1_RS08420 0a7220305ba74058cf4358826095cf79 664 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 263 570 1.5E-26 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS08420 0a7220305ba74058cf4358826095cf79 664 PANTHER PTHR11938 169 596 1.8E-83 T 22-04-2016 SMGD1_RS08420 0a7220305ba74058cf4358826095cf79 664 SUPERFAMILY SSF51971 261 513 2.77E-46 T 22-04-2016 SMGD1_RS08420 0a7220305ba74058cf4358826095cf79 664 SUPERFAMILY SSF46548 168 273 1.46E-19 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 SMGD1_RS08420 0a7220305ba74058cf4358826095cf79 664 Gene3D G3DSA:1.10.1060.10 615 657 1.3E-8 T 22-04-2016 SMGD1_RS08420 0a7220305ba74058cf4358826095cf79 664 Gene3D G3DSA:1.10.1060.10 161 265 3.3E-26 T 22-04-2016 SMGD1_RS08420 0a7220305ba74058cf4358826095cf79 664 Gene3D G3DSA:3.50.50.60 352 514 1.6E-25 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS04550 7f081aacc125d77a60843ea1f5ce9cec 272 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 132 160 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 SMGD1_RS04550 7f081aacc125d77a60843ea1f5ce9cec 272 PANTHER PTHR24322:SF397 145 177 6.8E-44 T 22-04-2016 SMGD1_RS04550 7f081aacc125d77a60843ea1f5ce9cec 272 Gene3D G3DSA:3.40.50.720 3 265 3.1E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS04550 7f081aacc125d77a60843ea1f5ce9cec 272 PANTHER PTHR24322 145 177 6.8E-44 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMGD1_RS04550 7f081aacc125d77a60843ea1f5ce9cec 272 PANTHER PTHR24322 7 129 6.8E-44 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMGD1_RS04550 7f081aacc125d77a60843ea1f5ce9cec 272 SUPERFAMILY SSF51735 3 256 1.17E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS04550 7f081aacc125d77a60843ea1f5ce9cec 272 PANTHER PTHR24322:SF397 7 129 6.8E-44 T 22-04-2016 SMGD1_RS04550 7f081aacc125d77a60843ea1f5ce9cec 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 72 83 9.6E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMGD1_RS04550 7f081aacc125d77a60843ea1f5ce9cec 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 9.6E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMGD1_RS04550 7f081aacc125d77a60843ea1f5ce9cec 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 9.6E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMGD1_RS04550 7f081aacc125d77a60843ea1f5ce9cec 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 9.6E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMGD1_RS04550 7f081aacc125d77a60843ea1f5ce9cec 272 Pfam PF00106 short chain dehydrogenase 3 186 1.1E-38 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMGD1_RS08580 106e02bf7b90afea34eda64e3af8057a 401 SUPERFAMILY SSF51905 2 330 7.64E-28 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS08580 106e02bf7b90afea34eda64e3af8057a 401 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 296 303 2.9E-8 T 22-04-2016 SMGD1_RS08580 106e02bf7b90afea34eda64e3af8057a 401 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 161 186 2.9E-8 T 22-04-2016 SMGD1_RS08580 106e02bf7b90afea34eda64e3af8057a 401 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 2.9E-8 T 22-04-2016 SMGD1_RS08580 106e02bf7b90afea34eda64e3af8057a 401 Gene3D G3DSA:3.50.50.60 111 330 2.3E-30 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS08580 106e02bf7b90afea34eda64e3af8057a 401 Gene3D G3DSA:3.50.50.60 7 110 3.6E-23 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS08580 106e02bf7b90afea34eda64e3af8057a 401 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 254 270 1.9E-14 T 22-04-2016 SMGD1_RS08580 106e02bf7b90afea34eda64e3af8057a 401 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 281 303 1.9E-14 T 22-04-2016 SMGD1_RS08580 106e02bf7b90afea34eda64e3af8057a 401 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 1.9E-14 T 22-04-2016 SMGD1_RS08580 106e02bf7b90afea34eda64e3af8057a 401 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 1.9E-14 T 22-04-2016 SMGD1_RS08580 106e02bf7b90afea34eda64e3af8057a 401 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 161 179 1.9E-14 T 22-04-2016 SMGD1_RS08580 106e02bf7b90afea34eda64e3af8057a 401 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 323 1.7E-42 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS08580 106e02bf7b90afea34eda64e3af8057a 401 PANTHER PTHR22912 160 330 1.7E-30 T 22-04-2016 SMGD1_RS08580 106e02bf7b90afea34eda64e3af8057a 401 PANTHER PTHR22912 1 139 1.7E-30 T 22-04-2016 SMGD1_RS01935 b1cc74673f498eb0df277fb8c0f85875 716 Pfam PF02824 TGS domain 400 457 3.6E-13 T 22-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 SMGD1_RS01935 b1cc74673f498eb0df277fb8c0f85875 716 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 37 692 2.0E-185 T 22-04-2016 IPR004811 RelA/SpoT family GO:0015969 SMGD1_RS01935 b1cc74673f498eb0df277fb8c0f85875 716 SMART SM00471 52 172 3.3E-9 T 22-04-2016 IPR003607 HD/PDEase domain SMGD1_RS01935 b1cc74673f498eb0df277fb8c0f85875 716 SUPERFAMILY SSF81301 215 371 7.19E-49 T 22-04-2016 SMGD1_RS01935 b1cc74673f498eb0df277fb8c0f85875 716 SMART SM00954 257 366 8.4E-58 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 SMGD1_RS01935 b1cc74673f498eb0df277fb8c0f85875 716 PANTHER PTHR21262 32 713 7.6E-163 T 22-04-2016 SMGD1_RS01935 b1cc74673f498eb0df277fb8c0f85875 716 SUPERFAMILY SSF81271 387 457 2.4E-16 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 SMGD1_RS01935 b1cc74673f498eb0df277fb8c0f85875 716 SUPERFAMILY SSF109604 28 209 6.28E-60 T 22-04-2016 SMGD1_RS01935 b1cc74673f498eb0df277fb8c0f85875 716 Pfam PF04607 Region found in RelA / SpoT proteins 257 366 9.9E-33 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 SMGD1_RS01935 b1cc74673f498eb0df277fb8c0f85875 716 Pfam PF13328 HD domain 37 194 1.1E-42 T 22-04-2016 IPR003607 HD/PDEase domain SMGD1_RS01935 b1cc74673f498eb0df277fb8c0f85875 716 Gene3D G3DSA:3.10.20.30 400 457 7.7E-8 T 22-04-2016 IPR012675 Beta-grasp domain SMGD1_RS01935 b1cc74673f498eb0df277fb8c0f85875 716 Gene3D G3DSA:3.30.460.10 213 345 1.6E-35 T 22-04-2016 SMGD1_RS01935 b1cc74673f498eb0df277fb8c0f85875 716 PANTHER PTHR21262:SF0 32 713 7.6E-163 T 22-04-2016 SMGD1_RS11930 3502ad635db81d410139a32c36da5219 468 PIRSF PIRSF500061 5 465 3.4E-131 T 22-04-2016 SMGD1_RS11930 3502ad635db81d410139a32c36da5219 468 Pfam PF01645 Conserved region in glutamate synthase 171 465 1.2E-84 T 22-04-2016 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 SMGD1_RS11930 3502ad635db81d410139a32c36da5219 468 Gene3D G3DSA:3.20.20.70 106 455 2.9E-100 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMGD1_RS11930 3502ad635db81d410139a32c36da5219 468 PANTHER PTHR11938:SF65 236 452 3.6E-40 T 22-04-2016 SMGD1_RS11930 3502ad635db81d410139a32c36da5219 468 SMART SM00704 9 46 1.1E-6 T 22-04-2016 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 SMGD1_RS11930 3502ad635db81d410139a32c36da5219 468 SMART SM00704 48 82 3.7E-6 T 22-04-2016 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 SMGD1_RS11930 3502ad635db81d410139a32c36da5219 468 PANTHER PTHR11938 236 452 3.6E-40 T 22-04-2016 SMGD1_RS11930 3502ad635db81d410139a32c36da5219 468 Pfam PF09360 Iron-binding zinc finger CDGSH type 14 40 1.1E-8 T 22-04-2016 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 SMGD1_RS11930 3502ad635db81d410139a32c36da5219 468 Pfam PF09360 Iron-binding zinc finger CDGSH type 53 77 1.0E-7 T 22-04-2016 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 SMGD1_RS11930 3502ad635db81d410139a32c36da5219 468 PIRSF PIRSF006429 11 467 1.8E-128 T 22-04-2016 IPR024188 Glutamate synthase large subunit-like protein SMGD1_RS11930 3502ad635db81d410139a32c36da5219 468 SUPERFAMILY SSF51395 128 452 1.46E-88 T 22-04-2016 SMGD1_RS11495 160ba9140ff6866987b12c15a56c958d 578 PANTHER PTHR30258:SF2 14 577 2.7E-166 T 22-04-2016 SMGD1_RS11495 160ba9140ff6866987b12c15a56c958d 578 Gene3D G3DSA:3.40.50.300 309 576 9.0E-91 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS11495 160ba9140ff6866987b12c15a56c958d 578 Gene3D G3DSA:3.30.450.90 179 303 4.2E-45 T 22-04-2016 SMGD1_RS11495 160ba9140ff6866987b12c15a56c958d 578 SUPERFAMILY SSF160246 39 163 2.28E-18 T 22-04-2016 SMGD1_RS11495 160ba9140ff6866987b12c15a56c958d 578 SUPERFAMILY SSF52540 197 575 4.23E-90 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS11495 160ba9140ff6866987b12c15a56c958d 578 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 398 412 - T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 SMGD1_RS11495 160ba9140ff6866987b12c15a56c958d 578 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 69 163 3.5E-20 T 22-04-2016 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 SMGD1_RS11495 160ba9140ff6866987b12c15a56c958d 578 PANTHER PTHR30258 14 577 2.7E-166 T 22-04-2016 SMGD1_RS11495 160ba9140ff6866987b12c15a56c958d 578 Pfam PF00437 Type II/IV secretion system protein 211 470 2.4E-76 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 SMGD1_RS06165 b8945ad515416163f8b35638dddc7995 179 Gene3D G3DSA:3.30.1130.10 44 172 8.6E-62 T 22-04-2016 SMGD1_RS06165 b8945ad515416163f8b35638dddc7995 179 Pfam PF01227 GTP cyclohydrolase I 2 171 1.5E-75 T 22-04-2016 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 SMGD1_RS06165 b8945ad515416163f8b35638dddc7995 179 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 1 172 2.0E-74 T 22-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 SMGD1_RS06165 b8945ad515416163f8b35638dddc7995 179 PANTHER PTHR11109 1 173 2.7E-102 T 22-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 SMGD1_RS06165 b8945ad515416163f8b35638dddc7995 179 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 1 172 36.54 T 22-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 SMGD1_RS06165 b8945ad515416163f8b35638dddc7995 179 Gene3D G3DSA:1.10.286.10 4 41 4.2E-15 T 22-04-2016 SMGD1_RS06165 b8945ad515416163f8b35638dddc7995 179 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 51 67 - T 22-04-2016 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 SMGD1_RS06165 b8945ad515416163f8b35638dddc7995 179 SUPERFAMILY SSF55620 1 172 1.93E-76 T 22-04-2016 SMGD1_RS05660 f6bb342b32525ba93403b0bc18e49a40 397 Pfam PF03404 Mo-co oxidoreductase dimerisation domain 277 336 1.9E-7 T 22-04-2016 IPR005066 Moybdenum cofactor oxidoreductase, dimerisation GO:0016491|GO:0030151|GO:0055114 SMGD1_RS05660 f6bb342b32525ba93403b0bc18e49a40 397 PANTHER PTHR19372 38 397 1.7E-74 T 22-04-2016 SMGD1_RS05660 f6bb342b32525ba93403b0bc18e49a40 397 SUPERFAMILY SSF81296 281 396 2.45E-24 T 22-04-2016 IPR014756 Immunoglobulin E-set SMGD1_RS05660 f6bb342b32525ba93403b0bc18e49a40 397 Pfam PF00174 Oxidoreductase molybdopterin binding domain 82 250 9.5E-50 T 22-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 SMGD1_RS05660 f6bb342b32525ba93403b0bc18e49a40 397 Gene3D G3DSA:3.90.420.10 40 270 1.4E-67 T 22-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 SMGD1_RS05660 f6bb342b32525ba93403b0bc18e49a40 397 PRINTS PR00407 Eukaryotic molybdopterin domain signature 66 82 1.3E-16 T 22-04-2016 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 SMGD1_RS05660 f6bb342b32525ba93403b0bc18e49a40 397 PRINTS PR00407 Eukaryotic molybdopterin domain signature 278 290 1.3E-16 T 22-04-2016 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 SMGD1_RS05660 f6bb342b32525ba93403b0bc18e49a40 397 PRINTS PR00407 Eukaryotic molybdopterin domain signature 214 227 1.3E-16 T 22-04-2016 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 SMGD1_RS05660 f6bb342b32525ba93403b0bc18e49a40 397 PRINTS PR00407 Eukaryotic molybdopterin domain signature 145 160 1.3E-16 T 22-04-2016 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 SMGD1_RS05660 f6bb342b32525ba93403b0bc18e49a40 397 PRINTS PR00407 Eukaryotic molybdopterin domain signature 317 329 1.3E-16 T 22-04-2016 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 SMGD1_RS05660 f6bb342b32525ba93403b0bc18e49a40 397 PRINTS PR00407 Eukaryotic molybdopterin domain signature 197 213 1.3E-16 T 22-04-2016 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 SMGD1_RS05660 f6bb342b32525ba93403b0bc18e49a40 397 SUPERFAMILY SSF56524 40 262 2.49E-61 T 22-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 SMGD1_RS05660 f6bb342b32525ba93403b0bc18e49a40 397 Gene3D G3DSA:2.60.40.650 281 396 1.3E-21 T 22-04-2016 IPR005066 Moybdenum cofactor oxidoreductase, dimerisation GO:0016491|GO:0030151|GO:0055114 SMGD1_RS10425 50a184e0d70976cf51567650826e2f00 278 PANTHER PTHR10458 23 164 1.4E-15 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SMGD1_RS10425 50a184e0d70976cf51567650826e2f00 278 Gene3D G3DSA:3.90.45.10 4 183 4.1E-30 T 22-04-2016 IPR023635 Peptide deformylase SMGD1_RS10425 50a184e0d70976cf51567650826e2f00 278 SUPERFAMILY SSF56420 1 163 1.7E-28 T 22-04-2016 IPR023635 Peptide deformylase SMGD1_RS10425 50a184e0d70976cf51567650826e2f00 278 PANTHER PTHR10458:SF2 23 164 1.4E-15 T 22-04-2016 SMGD1_RS10425 50a184e0d70976cf51567650826e2f00 278 PRINTS PR01576 Peptide deformylase signature 105 123 3.8E-8 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SMGD1_RS10425 50a184e0d70976cf51567650826e2f00 278 PRINTS PR01576 Peptide deformylase signature 32 61 3.8E-8 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SMGD1_RS10425 50a184e0d70976cf51567650826e2f00 278 PRINTS PR01576 Peptide deformylase signature 124 153 3.8E-8 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SMGD1_RS10425 50a184e0d70976cf51567650826e2f00 278 Pfam PF01327 Polypeptide deformylase 3 156 2.9E-26 T 22-04-2016 IPR023635 Peptide deformylase SMGD1_RS09570 5f69ef874a4b2c691ced098c8e96d1c1 738 TIGRFAM TIGR01736 FGAM_synth_II: phosphoribosylformylglycinamidine synthase II 17 733 8.2E-283 T 22-04-2016 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SMGD1_RS09570 5f69ef874a4b2c691ced098c8e96d1c1 738 Pfam PF02769 AIR synthase related protein, C-terminal domain 576 709 5.8E-12 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SMGD1_RS09570 5f69ef874a4b2c691ced098c8e96d1c1 738 Pfam PF02769 AIR synthase related protein, C-terminal domain 207 359 1.5E-30 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SMGD1_RS09570 5f69ef874a4b2c691ced098c8e96d1c1 738 SUPERFAMILY SSF56042 205 429 1.79E-50 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SMGD1_RS09570 5f69ef874a4b2c691ced098c8e96d1c1 738 PANTHER PTHR10099 17 738 1.3E-292 T 22-04-2016 SMGD1_RS09570 5f69ef874a4b2c691ced098c8e96d1c1 738 SUPERFAMILY SSF55326 400 569 1.09E-49 T 22-04-2016 SMGD1_RS09570 5f69ef874a4b2c691ced098c8e96d1c1 738 Gene3D G3DSA:3.90.650.10 255 357 5.8E-4 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SMGD1_RS09570 5f69ef874a4b2c691ced098c8e96d1c1 738 Gene3D G3DSA:3.30.1330.10 49 198 4.2E-46 T 22-04-2016 IPR016188 PurM-like, N-terminal domain SMGD1_RS09570 5f69ef874a4b2c691ced098c8e96d1c1 738 Gene3D G3DSA:3.30.1330.10 419 565 5.8E-52 T 22-04-2016 IPR016188 PurM-like, N-terminal domain SMGD1_RS09570 5f69ef874a4b2c691ced098c8e96d1c1 738 PANTHER PTHR10099:SF2 17 738 1.3E-292 T 22-04-2016 SMGD1_RS09570 5f69ef874a4b2c691ced098c8e96d1c1 738 Pfam PF00586 AIR synthase related protein, N-terminal domain 86 192 1.0E-21 T 22-04-2016 IPR016188 PurM-like, N-terminal domain SMGD1_RS09570 5f69ef874a4b2c691ced098c8e96d1c1 738 Pfam PF00586 AIR synthase related protein, N-terminal domain 457 561 1.2E-19 T 22-04-2016 IPR016188 PurM-like, N-terminal domain SMGD1_RS09570 5f69ef874a4b2c691ced098c8e96d1c1 738 PIRSF PIRSF001587 2 737 4.5E-302 T 22-04-2016 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SMGD1_RS09570 5f69ef874a4b2c691ced098c8e96d1c1 738 Hamap MF_00420 Phosphoribosylformylglycinamidine synthase subunit PurL [purL]. 1 738 298.244 T 22-04-2016 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SMGD1_RS09570 5f69ef874a4b2c691ced098c8e96d1c1 738 SUPERFAMILY SSF56042 572 734 7.03E-29 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SMGD1_RS09570 5f69ef874a4b2c691ced098c8e96d1c1 738 SUPERFAMILY SSF55326 13 199 7.33E-48 T 22-04-2016 SMGD1_RS03455 a333910817bb4cbe488bc2920ce63883 133 SUPERFAMILY SSF46785 4 131 1.4E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMGD1_RS03455 a333910817bb4cbe488bc2920ce63883 133 PANTHER PTHR33202:SF7 1 133 4.3E-27 T 22-04-2016 SMGD1_RS03455 a333910817bb4cbe488bc2920ce63883 133 PANTHER PTHR33202 1 133 4.3E-27 T 22-04-2016 SMGD1_RS03455 a333910817bb4cbe488bc2920ce63883 133 Gene3D G3DSA:1.10.10.10 4 80 2.2E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMGD1_RS03455 a333910817bb4cbe488bc2920ce63883 133 Pfam PF01475 Ferric uptake regulator family 12 123 5.7E-24 T 22-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 SMGD1_RS04020 9bea773d0c40ad0e1102e8888799ad12 600 Pfam PF01541 GIY-YIG catalytic domain 15 96 1.9E-10 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily SMGD1_RS04020 9bea773d0c40ad0e1102e8888799ad12 600 Gene3D G3DSA:3.40.1440.10 14 99 1.2E-13 T 22-04-2016 IPR027299 GIY-YIG domain SMGD1_RS04020 9bea773d0c40ad0e1102e8888799ad12 600 Hamap MF_00203 UvrABC system protein C [uvrC]. 1 598 23.511 T 22-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 SMGD1_RS04020 9bea773d0c40ad0e1102e8888799ad12 600 PANTHER PTHR30562:SF1 2 599 1.6E-144 T 22-04-2016 SMGD1_RS04020 9bea773d0c40ad0e1102e8888799ad12 600 Pfam PF02151 UvrB/uvrC motif 203 235 6.5E-8 T 22-04-2016 IPR001943 UVR domain GO:0005515 SMGD1_RS04020 9bea773d0c40ad0e1102e8888799ad12 600 SUPERFAMILY SSF47781 524 597 4.77E-10 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 SMGD1_RS04020 9bea773d0c40ad0e1102e8888799ad12 600 PANTHER PTHR30562 2 599 1.6E-144 T 22-04-2016 SMGD1_RS04020 9bea773d0c40ad0e1102e8888799ad12 600 SUPERFAMILY SSF82771 13 103 9.42E-21 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily SMGD1_RS04020 9bea773d0c40ad0e1102e8888799ad12 600 SUPERFAMILY SSF46600 200 237 2.35E-8 T 22-04-2016 IPR001943 UVR domain GO:0005515 SMGD1_RS04020 9bea773d0c40ad0e1102e8888799ad12 600 Gene3D G3DSA:1.10.150.20 549 597 4.3E-6 T 22-04-2016 SMGD1_RS04020 9bea773d0c40ad0e1102e8888799ad12 600 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 3 582 6.3E-159 T 22-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 SMGD1_RS04020 9bea773d0c40ad0e1102e8888799ad12 600 Gene3D G3DSA:4.10.860.10 183 237 3.0E-10 T 22-04-2016 IPR001943 UVR domain GO:0005515 SMGD1_RS04020 9bea773d0c40ad0e1102e8888799ad12 600 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 381 535 1.1E-38 T 22-04-2016 IPR001162 UvrC family homology region SMGD1_RS04020 9bea773d0c40ad0e1102e8888799ad12 600 SMART SM00465 13 101 8.2E-19 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily SMGD1_RS02000 fee79f721e259c9efc2455fd14a7c9fe 426 PANTHER PTHR23515 10 418 1.1E-131 T 22-04-2016 SMGD1_RS02000 fee79f721e259c9efc2455fd14a7c9fe 426 Pfam PF07690 Major Facilitator Superfamily 25 374 1.7E-29 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SMGD1_RS02000 fee79f721e259c9efc2455fd14a7c9fe 426 PANTHER PTHR23515:SF4 10 418 1.1E-131 T 22-04-2016 SMGD1_RS02000 fee79f721e259c9efc2455fd14a7c9fe 426 SUPERFAMILY SSF103473 12 413 1.02E-44 T 22-04-2016 IPR020846 Major facilitator superfamily domain SMGD1_RS02000 fee79f721e259c9efc2455fd14a7c9fe 426 Gene3D G3DSA:1.20.1250.20 212 411 3.7E-13 T 22-04-2016 SMGD1_RS02000 fee79f721e259c9efc2455fd14a7c9fe 426 Gene3D G3DSA:1.20.1250.20 14 201 3.9E-15 T 22-04-2016 SMGD1_RS14100 c146d44b692ed0874331b4b57f03b31b 224 Pfam PF01569 PAP2 superfamily 82 218 3.0E-22 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase SMGD1_RS14100 c146d44b692ed0874331b4b57f03b31b 224 Gene3D G3DSA:1.20.144.10 34 218 3.5E-32 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase SMGD1_RS14100 c146d44b692ed0874331b4b57f03b31b 224 SUPERFAMILY SSF48317 11 218 3.27E-31 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase SMGD1_RS14100 c146d44b692ed0874331b4b57f03b31b 224 SMART SM00014 81 213 9.8E-7 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase SMGD1_RS07505 b455db866a8478c77a808c842d194092 195 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 2 192 1.1E-45 T 22-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 SMGD1_RS07505 b455db866a8478c77a808c842d194092 195 Pfam PF01725 Ham1 family 3 187 3.7E-45 T 22-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 SMGD1_RS07505 b455db866a8478c77a808c842d194092 195 Gene3D G3DSA:3.90.950.10 2 194 2.1E-60 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like SMGD1_RS07505 b455db866a8478c77a808c842d194092 195 SUPERFAMILY SSF52972 2 193 1.7E-55 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like SMGD1_RS07505 b455db866a8478c77a808c842d194092 195 PANTHER PTHR11067 1 195 1.2E-45 T 22-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 SMGD1_RS07505 b455db866a8478c77a808c842d194092 195 Hamap MF_01405 dITP/XTP pyrophosphatase [rdgB]. 1 194 43.694 T 22-04-2016 IPR020922 Non-canonical purine NTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 SMGD1_RS07505 b455db866a8478c77a808c842d194092 195 PANTHER PTHR11067:SF9 1 195 1.2E-45 T 22-04-2016 SMGD1_RS08965 594c9962460e96de5f1dbc5c257b1be8 377 SUPERFAMILY SSF50249 138 206 2.53E-10 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMGD1_RS08965 594c9962460e96de5f1dbc5c257b1be8 377 SUPERFAMILY SSF69705 3 126 4.97E-20 T 22-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 SMGD1_RS08965 594c9962460e96de5f1dbc5c257b1be8 377 PANTHER PTHR22648 1 366 6.4E-73 T 22-04-2016 SMGD1_RS08965 594c9962460e96de5f1dbc5c257b1be8 377 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 1 376 22.907 T 22-04-2016 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 SMGD1_RS08965 594c9962460e96de5f1dbc5c257b1be8 377 Gene3D G3DSA:3.30.300.20 206 284 3.0E-29 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta SMGD1_RS08965 594c9962460e96de5f1dbc5c257b1be8 377 SMART SM00316 139 207 6.9E-7 T 22-04-2016 IPR022967 RNA-binding domain, S1 SMGD1_RS08965 594c9962460e96de5f1dbc5c257b1be8 377 Pfam PF13184 NusA-like KH domain 237 305 3.2E-20 T 22-04-2016 IPR025249 KH domain, NusA-like GO:0003723 SMGD1_RS08965 594c9962460e96de5f1dbc5c257b1be8 377 SUPERFAMILY SSF54814 207 284 2.13E-24 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 SMGD1_RS08965 594c9962460e96de5f1dbc5c257b1be8 377 Gene3D G3DSA:3.30.300.20 287 353 1.5E-17 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta SMGD1_RS08965 594c9962460e96de5f1dbc5c257b1be8 377 Gene3D G3DSA:2.40.50.140 141 205 1.1E-13 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMGD1_RS08965 594c9962460e96de5f1dbc5c257b1be8 377 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 4 351 7.8E-96 T 22-04-2016 IPR010213 Transcription termination factor NusA GO:0003723 SMGD1_RS08965 594c9962460e96de5f1dbc5c257b1be8 377 PANTHER PTHR22648:SF0 1 366 6.4E-73 T 22-04-2016 SMGD1_RS08965 594c9962460e96de5f1dbc5c257b1be8 377 Gene3D G3DSA:3.30.1480.10 3 125 4.5E-17 T 22-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 SMGD1_RS08965 594c9962460e96de5f1dbc5c257b1be8 377 Pfam PF08529 NusA N-terminal domain 4 126 1.0E-16 T 22-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 SMGD1_RS08965 594c9962460e96de5f1dbc5c257b1be8 377 SUPERFAMILY SSF54814 288 352 5.3E-10 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 SMGD1_RS01560 2a45ca1a30f03ace4a08fa87851c95a3 1503 Gene3D G3DSA:3.60.20.10 22 457 1.6E-182 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SMGD1_RS01560 2a45ca1a30f03ace4a08fa87851c95a3 1503 Pfam PF01645 Conserved region in glutamate synthase 820 1181 5.7E-156 T 22-04-2016 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 SMGD1_RS01560 2a45ca1a30f03ace4a08fa87851c95a3 1503 PANTHER PTHR11938 11 1498 0.0 T 22-04-2016 SMGD1_RS01560 2a45ca1a30f03ace4a08fa87851c95a3 1503 SUPERFAMILY SSF51395 464 1216 3.3E-256 T 22-04-2016 SMGD1_RS01560 2a45ca1a30f03ace4a08fa87851c95a3 1503 Pfam PF04898 Glutamate synthase central domain 473 757 1.2E-113 T 22-04-2016 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 UniPathway: UPA00045 SMGD1_RS01560 2a45ca1a30f03ace4a08fa87851c95a3 1503 PANTHER PTHR11938:SF1 11 1498 0.0 T 22-04-2016 SMGD1_RS01560 2a45ca1a30f03ace4a08fa87851c95a3 1503 Gene3D G3DSA:3.20.20.70 819 1218 3.7E-180 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMGD1_RS01560 2a45ca1a30f03ace4a08fa87851c95a3 1503 Pfam PF00310 Glutamine amidotransferases class-II 22 446 1.1E-178 T 22-04-2016 IPR017932 Glutamine amidotransferase type 2 domain SMGD1_RS01560 2a45ca1a30f03ace4a08fa87851c95a3 1503 Pfam PF01493 GXGXG motif 1261 1448 3.7E-79 T 22-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 SMGD1_RS01560 2a45ca1a30f03ace4a08fa87851c95a3 1503 Gene3D G3DSA:3.20.20.70 460 807 3.5E-106 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMGD1_RS01560 2a45ca1a30f03ace4a08fa87851c95a3 1503 SUPERFAMILY SSF69336 1230 1494 3.4E-93 T 22-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 SMGD1_RS01560 2a45ca1a30f03ace4a08fa87851c95a3 1503 Gene3D G3DSA:2.160.20.60 1235 1501 1.6E-103 T 22-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 SMGD1_RS01560 2a45ca1a30f03ace4a08fa87851c95a3 1503 SUPERFAMILY SSF56235 22 449 2.39E-148 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SMGD1_RS02310 7e948c99566c3a8d60620d4fbfe5e871 374 Gene3D G3DSA:3.40.50.2000 185 345 1.1E-19 T 22-04-2016 SMGD1_RS02310 7e948c99566c3a8d60620d4fbfe5e871 374 Pfam PF00534 Glycosyl transferases group 1 180 345 8.1E-31 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 SMGD1_RS02310 7e948c99566c3a8d60620d4fbfe5e871 374 PANTHER PTHR12526 11 368 4.2E-48 T 22-04-2016 SMGD1_RS02310 7e948c99566c3a8d60620d4fbfe5e871 374 SUPERFAMILY SSF53756 19 367 4.93E-65 T 22-04-2016 SMGD1_RS02310 7e948c99566c3a8d60620d4fbfe5e871 374 Pfam PF13477 Glycosyl transferase 4-like 3 147 7.8E-21 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain SMGD1_RS13435 de9936f50b59714d5a07e3f215aa0e92 660 PANTHER PTHR34216:SF2 443 623 1.4E-119 T 22-04-2016 SMGD1_RS13435 de9936f50b59714d5a07e3f215aa0e92 660 PANTHER PTHR34216:SF2 21 282 1.4E-119 T 22-04-2016 SMGD1_RS13435 de9936f50b59714d5a07e3f215aa0e92 660 TIGRFAM TIGR03938 deacetyl_PgaB: poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB 23 640 1.2E-247 T 22-04-2016 IPR023854 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB GO:0016810|GO:0042710 KEGG: 00240+3.5.1.-|KEGG: 00260+3.5.1.-|KEGG: 00332+3.5.1.-|KEGG: 00364+3.5.1.-|KEGG: 00480+3.5.1.-|KEGG: 00520+3.5.1.-|KEGG: 00600+3.5.1.-|KEGG: 00760+3.5.1.-|KEGG: 00930+3.5.1.- SMGD1_RS13435 de9936f50b59714d5a07e3f215aa0e92 660 SUPERFAMILY SSF88713 42 169 8.7E-36 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 SMGD1_RS13435 de9936f50b59714d5a07e3f215aa0e92 660 SUPERFAMILY SSF88713 197 321 8.7E-36 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 SMGD1_RS13435 de9936f50b59714d5a07e3f215aa0e92 660 PANTHER PTHR34216 443 623 1.4E-119 T 22-04-2016 SMGD1_RS13435 de9936f50b59714d5a07e3f215aa0e92 660 PANTHER PTHR34216 21 282 1.4E-119 T 22-04-2016 SMGD1_RS13435 de9936f50b59714d5a07e3f215aa0e92 660 Pfam PF01522 Polysaccharide deacetylase 77 242 2.6E-26 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 SMGD1_RS13435 de9936f50b59714d5a07e3f215aa0e92 660 Pfam PF14883 Hypothetical glycosyl hydrolase family 13 297 621 1.5E-136 T 22-04-2016 IPR032772 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB, C-terminal KEGG: 00240+3.5.1.-|KEGG: 00260+3.5.1.-|KEGG: 00332+3.5.1.-|KEGG: 00364+3.5.1.-|KEGG: 00480+3.5.1.-|KEGG: 00520+3.5.1.-|KEGG: 00600+3.5.1.-|KEGG: 00760+3.5.1.-|KEGG: 00930+3.5.1.- SMGD1_RS13435 de9936f50b59714d5a07e3f215aa0e92 660 Gene3D G3DSA:3.20.20.370 53 243 1.7E-27 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 SMGD1_RS13435 de9936f50b59714d5a07e3f215aa0e92 660 Gene3D G3DSA:3.20.20.370 292 334 1.7E-27 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 SMGD1_RS10030 f70fdd14a07d5469770813b704b8f361 731 Pfam PF00072 Response regulator receiver domain 141 251 1.0E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS10030 f70fdd14a07d5469770813b704b8f361 731 Pfam PF00072 Response regulator receiver domain 18 116 9.2E-15 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS10030 f70fdd14a07d5469770813b704b8f361 731 SMART SM00091 412 477 0.0013 T 22-04-2016 IPR000014 PAS domain SMGD1_RS10030 f70fdd14a07d5469770813b704b8f361 731 SMART SM00091 270 339 0.34 T 22-04-2016 IPR000014 PAS domain SMGD1_RS10030 f70fdd14a07d5469770813b704b8f361 731 Pfam PF13426 PAS domain 427 524 3.8E-14 T 22-04-2016 IPR000014 PAS domain SMGD1_RS10030 f70fdd14a07d5469770813b704b8f361 731 Gene3D G3DSA:1.10.3210.10 535 723 3.9E-19 T 22-04-2016 IPR006674 HD domain SMGD1_RS10030 f70fdd14a07d5469770813b704b8f361 731 Gene3D G3DSA:3.30.450.20 427 524 5.3E-26 T 22-04-2016 SMGD1_RS10030 f70fdd14a07d5469770813b704b8f361 731 Gene3D G3DSA:3.30.450.20 285 385 3.2E-29 T 22-04-2016 SMGD1_RS10030 f70fdd14a07d5469770813b704b8f361 731 SUPERFAMILY SSF55785 284 383 2.62E-30 T 22-04-2016 IPR000014 PAS domain SMGD1_RS10030 f70fdd14a07d5469770813b704b8f361 731 SMART SM00448 139 252 1.3E-32 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS10030 f70fdd14a07d5469770813b704b8f361 731 SMART SM00448 16 130 3.3E-16 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS10030 f70fdd14a07d5469770813b704b8f361 731 SUPERFAMILY SSF55785 425 522 2.58E-27 T 22-04-2016 IPR000014 PAS domain SMGD1_RS10030 f70fdd14a07d5469770813b704b8f361 731 SUPERFAMILY SSF109604 534 716 7.22E-39 T 22-04-2016 SMGD1_RS10030 f70fdd14a07d5469770813b704b8f361 731 Gene3D G3DSA:3.40.50.2300 14 116 2.6E-22 T 22-04-2016 SMGD1_RS10030 f70fdd14a07d5469770813b704b8f361 731 Pfam PF01966 HD domain 557 677 4.1E-17 T 22-04-2016 IPR006674 HD domain SMGD1_RS10030 f70fdd14a07d5469770813b704b8f361 731 PANTHER PTHR26402 139 249 6.6E-38 T 22-04-2016 SMGD1_RS10030 f70fdd14a07d5469770813b704b8f361 731 Gene3D G3DSA:3.40.50.2300 137 252 1.7E-32 T 22-04-2016 SMGD1_RS10030 f70fdd14a07d5469770813b704b8f361 731 SUPERFAMILY SSF52172 15 115 1.99E-20 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS10030 f70fdd14a07d5469770813b704b8f361 731 SMART SM00086 483 525 8.6E-5 T 22-04-2016 IPR001610 PAC motif SMGD1_RS10030 f70fdd14a07d5469770813b704b8f361 731 SMART SM00086 344 386 2.1E-8 T 22-04-2016 IPR001610 PAC motif SMGD1_RS10030 f70fdd14a07d5469770813b704b8f361 731 SMART SM00471 550 687 4.8E-8 T 22-04-2016 IPR003607 HD/PDEase domain SMGD1_RS10030 f70fdd14a07d5469770813b704b8f361 731 Pfam PF08447 PAS fold 295 379 4.1E-18 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 SMGD1_RS10030 f70fdd14a07d5469770813b704b8f361 731 SUPERFAMILY SSF52172 138 258 1.07E-33 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS10030 f70fdd14a07d5469770813b704b8f361 731 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 414 529 4.6E-21 T 22-04-2016 IPR000014 PAS domain SMGD1_RS10030 f70fdd14a07d5469770813b704b8f361 731 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 275 393 5.4E-21 T 22-04-2016 IPR000014 PAS domain SMGD1_RS11335 3ca9fa91336372a330d1a75810a100e4 102 PANTHER PTHR21349 1 100 1.8E-29 T 22-04-2016 SMGD1_RS11335 3ca9fa91336372a330d1a75810a100e4 102 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 100 2.6E-35 T 22-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 SMGD1_RS11335 3ca9fa91336372a330d1a75810a100e4 102 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 102 24.387 T 22-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS11335 3ca9fa91336372a330d1a75810a100e4 102 SUPERFAMILY SSF141091 1 100 2.75E-34 T 22-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 SMGD1_RS11335 3ca9fa91336372a330d1a75810a100e4 102 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 100 4.6E-38 T 22-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS11335 3ca9fa91336372a330d1a75810a100e4 102 ProSitePatterns PS01169 Ribosomal protein L21 signature. 71 93 - T 22-04-2016 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS14495 2d737daf9d216fd500dedd0c2cb1bfa9 556 Pfam PF01339 CheB methylesterase 106 277 7.3E-32 T 22-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 SMGD1_RS14495 2d737daf9d216fd500dedd0c2cb1bfa9 556 SMART SM00138 291 553 1.1E-31 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SMGD1_RS14495 2d737daf9d216fd500dedd0c2cb1bfa9 556 PANTHER PTHR24422 167 555 9.0E-52 T 22-04-2016 SMGD1_RS14495 2d737daf9d216fd500dedd0c2cb1bfa9 556 Gene3D G3DSA:3.40.50.150 356 552 5.1E-48 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS14495 2d737daf9d216fd500dedd0c2cb1bfa9 556 Gene3D G3DSA:3.40.50.180 98 280 7.6E-37 T 22-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 SMGD1_RS14495 2d737daf9d216fd500dedd0c2cb1bfa9 556 Pfam PF03705 CheR methyltransferase, all-alpha domain 296 336 7.9E-7 T 22-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal SMGD1_RS14495 2d737daf9d216fd500dedd0c2cb1bfa9 556 PRINTS PR00996 Glutamate methyltransferase family signature 492 506 2.7E-26 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SMGD1_RS14495 2d737daf9d216fd500dedd0c2cb1bfa9 556 PRINTS PR00996 Glutamate methyltransferase family signature 350 362 2.7E-26 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SMGD1_RS14495 2d737daf9d216fd500dedd0c2cb1bfa9 556 PRINTS PR00996 Glutamate methyltransferase family signature 386 406 2.7E-26 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SMGD1_RS14495 2d737daf9d216fd500dedd0c2cb1bfa9 556 PRINTS PR00996 Glutamate methyltransferase family signature 511 534 2.7E-26 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SMGD1_RS14495 2d737daf9d216fd500dedd0c2cb1bfa9 556 PRINTS PR00996 Glutamate methyltransferase family signature 418 434 2.7E-26 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SMGD1_RS14495 2d737daf9d216fd500dedd0c2cb1bfa9 556 SUPERFAMILY SSF52738 100 280 4.84E-35 T 22-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 SMGD1_RS14495 2d737daf9d216fd500dedd0c2cb1bfa9 556 Pfam PF01739 CheR methyltransferase, SAM binding domain 357 546 7.5E-40 T 22-04-2016 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal SMGD1_RS14495 2d737daf9d216fd500dedd0c2cb1bfa9 556 PANTHER PTHR24422:SF8 167 555 9.0E-52 T 22-04-2016 SMGD1_RS14495 2d737daf9d216fd500dedd0c2cb1bfa9 556 SUPERFAMILY SSF53335 357 537 5.0E-34 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS13620 f2d304922e339c9059f71ec80afd5569 412 SUPERFAMILY SSF109604 181 406 3.77E-25 T 22-04-2016 SMGD1_RS13620 f2d304922e339c9059f71ec80afd5569 412 Gene3D G3DSA:1.10.3150.10 171 352 1.4E-18 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD SMGD1_RS13620 f2d304922e339c9059f71ec80afd5569 412 PIRSF PIRSF003180 2 410 1.6E-84 T 22-04-2016 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing SMGD1_RS13620 f2d304922e339c9059f71ec80afd5569 412 PANTHER PTHR33525:SF4 4 363 7.0E-59 T 22-04-2016 SMGD1_RS13620 f2d304922e339c9059f71ec80afd5569 412 PANTHER PTHR33525 4 363 7.0E-59 T 22-04-2016 SMGD1_RS13620 f2d304922e339c9059f71ec80afd5569 412 Pfam PF08668 HDOD domain 214 323 1.8E-7 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD SMGD1_RS13620 f2d304922e339c9059f71ec80afd5569 412 SUPERFAMILY SSF141868 2 195 1.03E-18 T 22-04-2016 IPR001633 EAL domain SMGD1_RS12255 d473eccfb1281a3a4e1ad44c9c1bcd93 278 PANTHER PTHR33525 5 274 2.2E-37 T 22-04-2016 SMGD1_RS12255 d473eccfb1281a3a4e1ad44c9c1bcd93 278 Gene3D G3DSA:1.10.3150.10 4 268 4.7E-59 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD SMGD1_RS12255 d473eccfb1281a3a4e1ad44c9c1bcd93 278 PANTHER PTHR33525:SF3 5 274 2.2E-37 T 22-04-2016 SMGD1_RS12255 d473eccfb1281a3a4e1ad44c9c1bcd93 278 Pfam PF08668 HDOD domain 12 209 3.2E-39 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD SMGD1_RS12255 d473eccfb1281a3a4e1ad44c9c1bcd93 278 SUPERFAMILY SSF109604 3 265 1.19E-51 T 22-04-2016 SMGD1_RS06345 2d47c6d04f8c3c51dc1fcc77ccea131c 221 Gene3D G3DSA:3.60.110.10 7 190 4.4E-32 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 SMGD1_RS06345 2d47c6d04f8c3c51dc1fcc77ccea131c 221 PANTHER PTHR23088 1 171 2.0E-24 T 22-04-2016 SMGD1_RS06345 2d47c6d04f8c3c51dc1fcc77ccea131c 221 Pfam PF00795 Carbon-nitrogen hydrolase 5 189 5.6E-14 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 SMGD1_RS06345 2d47c6d04f8c3c51dc1fcc77ccea131c 221 SUPERFAMILY SSF56317 2 190 2.35E-34 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 SMGD1_RS01260 fdb5b53fb62bd34084d2007f3c0f9e8a 197 Pfam PF13489 Methyltransferase domain 23 155 2.2E-15 T 22-04-2016 SMGD1_RS01260 fdb5b53fb62bd34084d2007f3c0f9e8a 197 Gene3D G3DSA:3.40.50.150 22 191 1.4E-23 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS01260 fdb5b53fb62bd34084d2007f3c0f9e8a 197 SUPERFAMILY SSF53335 16 180 1.57E-21 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS13825 e81f49ae1dd86e6b7b3c46f9d77dba24 399 Gene3D G3DSA:3.40.50.1100 107 184 1.1E-19 T 22-04-2016 SMGD1_RS13825 e81f49ae1dd86e6b7b3c46f9d77dba24 399 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 61 383 3.2E-48 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SMGD1_RS13825 e81f49ae1dd86e6b7b3c46f9d77dba24 399 PIRSF PIRSF001413 5 399 7.4E-160 T 22-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 SMGD1_RS13825 e81f49ae1dd86e6b7b3c46f9d77dba24 399 PANTHER PTHR10314 15 389 1.2E-216 T 22-04-2016 SMGD1_RS13825 e81f49ae1dd86e6b7b3c46f9d77dba24 399 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 10 396 51.388 T 22-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 SMGD1_RS13825 e81f49ae1dd86e6b7b3c46f9d77dba24 399 SUPERFAMILY SSF53686 11 392 3.14E-146 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SMGD1_RS13825 e81f49ae1dd86e6b7b3c46f9d77dba24 399 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 88 102 - T 22-04-2016 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 SMGD1_RS13825 e81f49ae1dd86e6b7b3c46f9d77dba24 399 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 15 393 1.4E-188 T 22-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 SMGD1_RS13825 e81f49ae1dd86e6b7b3c46f9d77dba24 399 PANTHER PTHR10314:SF3 15 389 1.2E-216 T 22-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 SMGD1_RS13825 e81f49ae1dd86e6b7b3c46f9d77dba24 399 Gene3D G3DSA:3.40.50.1100 185 397 3.8E-89 T 22-04-2016 SMGD1_RS10675 8d52c47a753e40860e1ab4300c97b5e5 344 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 6 122 9.5E-32 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 SMGD1_RS10675 8d52c47a753e40860e1ab4300c97b5e5 344 PIRSF PIRSF000148 4 342 5.8E-119 T 22-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 SMGD1_RS10675 8d52c47a753e40860e1ab4300c97b5e5 344 SMART SM00859 6 123 5.1E-41 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 SMGD1_RS10675 8d52c47a753e40860e1ab4300c97b5e5 344 PANTHER PTHR10174 69 335 1.4E-66 T 22-04-2016 SMGD1_RS10675 8d52c47a753e40860e1ab4300c97b5e5 344 Gene3D G3DSA:3.40.50.720 1 144 5.0E-59 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS10675 8d52c47a753e40860e1ab4300c97b5e5 344 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 4 338 36.274 T 22-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 SMGD1_RS10675 8d52c47a753e40860e1ab4300c97b5e5 344 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 143 323 9.1E-51 T 22-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SMGD1_RS10675 8d52c47a753e40860e1ab4300c97b5e5 344 Gene3D G3DSA:3.30.360.10 145 321 1.2E-72 T 22-04-2016 SMGD1_RS10675 8d52c47a753e40860e1ab4300c97b5e5 344 PANTHER PTHR10174:SF2 69 335 1.4E-66 T 22-04-2016 SMGD1_RS10675 8d52c47a753e40860e1ab4300c97b5e5 344 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 235 249 - T 22-04-2016 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 SMGD1_RS10675 8d52c47a753e40860e1ab4300c97b5e5 344 SUPERFAMILY SSF51735 4 160 1.82E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS10675 8d52c47a753e40860e1ab4300c97b5e5 344 SUPERFAMILY SSF55347 133 325 7.86E-70 T 22-04-2016 SMGD1_RS10675 8d52c47a753e40860e1ab4300c97b5e5 344 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 6 338 6.0E-135 T 22-04-2016 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 SMGD1_RS02980 cb2482571145c9b9e52747bd7307e9ee 798 SUPERFAMILY SSF50341 509 641 6.02E-33 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SMGD1_RS02980 cb2482571145c9b9e52747bd7307e9ee 798 Pfam PF00072 Response regulator receiver domain 674 786 2.8E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS02980 cb2482571145c9b9e52747bd7307e9ee 798 Gene3D G3DSA:1.10.287.560 254 323 9.2E-19 T 22-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 SMGD1_RS02980 cb2482571145c9b9e52747bd7307e9ee 798 SUPERFAMILY SSF47384 255 323 5.1E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS02980 cb2482571145c9b9e52747bd7307e9ee 798 SMART SM00448 672 787 1.5E-32 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS02980 cb2482571145c9b9e52747bd7307e9ee 798 PANTHER PTHR22617:SF6 1 657 3.7E-224 T 22-04-2016 SMGD1_RS02980 cb2482571145c9b9e52747bd7307e9ee 798 SUPERFAMILY SSF55874 324 508 3.14E-38 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS02980 cb2482571145c9b9e52747bd7307e9ee 798 Gene3D G3DSA:3.30.565.10 324 509 5.7E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS02980 cb2482571145c9b9e52747bd7307e9ee 798 Pfam PF01584 CheW-like domain 514 643 6.3E-24 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SMGD1_RS02980 cb2482571145c9b9e52747bd7307e9ee 798 SUPERFAMILY SSF47226 5 127 1.2E-30 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SMGD1_RS02980 cb2482571145c9b9e52747bd7307e9ee 798 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 255 322 9.2E-17 T 22-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 SMGD1_RS02980 cb2482571145c9b9e52747bd7307e9ee 798 Gene3D G3DSA:3.40.50.2300 669 792 1.8E-34 T 22-04-2016 SMGD1_RS02980 cb2482571145c9b9e52747bd7307e9ee 798 SMART SM00260 502 641 3.0E-40 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SMGD1_RS02980 cb2482571145c9b9e52747bd7307e9ee 798 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 370 509 2.0E-16 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS02980 cb2482571145c9b9e52747bd7307e9ee 798 SUPERFAMILY SSF52172 670 792 1.71E-33 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS02980 cb2482571145c9b9e52747bd7307e9ee 798 Gene3D G3DSA:2.40.50.180 534 596 2.5E-14 T 22-04-2016 SMGD1_RS02980 cb2482571145c9b9e52747bd7307e9ee 798 SMART SM00073 4 101 4.1E-27 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SMGD1_RS02980 cb2482571145c9b9e52747bd7307e9ee 798 Pfam PF01627 Hpt domain 6 96 1.1E-15 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SMGD1_RS02980 cb2482571145c9b9e52747bd7307e9ee 798 Gene3D G3DSA:1.20.120.160 2 140 1.1E-39 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SMGD1_RS02980 cb2482571145c9b9e52747bd7307e9ee 798 PANTHER PTHR22617 1 657 3.7E-224 T 22-04-2016 SMGD1_RS02980 cb2482571145c9b9e52747bd7307e9ee 798 SMART SM01231 254 322 3.9E-18 T 22-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 SMGD1_RS02980 cb2482571145c9b9e52747bd7307e9ee 798 SMART SM00387 367 510 4.4E-24 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS02980 cb2482571145c9b9e52747bd7307e9ee 798 Gene3D G3DSA:2.30.30.40 597 640 1.5E-23 T 22-04-2016 SMGD1_RS02980 cb2482571145c9b9e52747bd7307e9ee 798 Gene3D G3DSA:2.30.30.40 510 531 1.5E-23 T 22-04-2016 SMGD1_RS02980 cb2482571145c9b9e52747bd7307e9ee 798 PRINTS PR00344 Bacterial sensor protein C-terminal signature 470 488 6.03369E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS02980 cb2482571145c9b9e52747bd7307e9ee 798 PRINTS PR00344 Bacterial sensor protein C-terminal signature 494 507 6.03369E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS02980 cb2482571145c9b9e52747bd7307e9ee 798 PRINTS PR00344 Bacterial sensor protein C-terminal signature 412 426 6.03369E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS02370 ee7fa85c11defae41cc13f4ddebc6e9d 245 Pfam PF00535 Glycosyl transferase family 2 8 173 4.2E-19 T 22-04-2016 IPR001173 Glycosyltransferase 2-like SMGD1_RS02370 ee7fa85c11defae41cc13f4ddebc6e9d 245 SUPERFAMILY SSF53448 5 180 8.67E-24 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMGD1_RS02370 ee7fa85c11defae41cc13f4ddebc6e9d 245 Gene3D G3DSA:3.90.550.10 8 179 6.5E-17 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMGD1_RS02370 ee7fa85c11defae41cc13f4ddebc6e9d 245 PANTHER PTHR10859 8 220 1.3E-31 T 22-04-2016 SMGD1_RS03450 8bc4b1a05d7ef5cced357b716f8029d8 219 SUPERFAMILY SSF47240 41 170 7.27E-35 T 22-04-2016 IPR009078 Ferritin-like superfamily SMGD1_RS03450 8bc4b1a05d7ef5cced357b716f8029d8 219 Pfam PF06397 Desulfoferrodoxin, N-terminal domain 3 35 2.9E-13 T 22-04-2016 IPR004462 Desulfoferrodoxin Dfx GO:0005506 SMGD1_RS03450 8bc4b1a05d7ef5cced357b716f8029d8 219 TIGRFAM TIGR00319 desulf_FeS4: desulfoferrodoxin FeS4 iron-binding domain 3 33 2.2E-12 T 22-04-2016 IPR004462 Desulfoferrodoxin Dfx GO:0005506 SMGD1_RS03450 8bc4b1a05d7ef5cced357b716f8029d8 219 Gene3D G3DSA:1.20.1260.10 39 171 3.1E-44 T 22-04-2016 IPR012347 Ferritin-related SMGD1_RS03450 8bc4b1a05d7ef5cced357b716f8029d8 219 PANTHER PTHR33746 31 216 2.8E-62 T 22-04-2016 SMGD1_RS03450 8bc4b1a05d7ef5cced357b716f8029d8 219 Gene3D G3DSA:2.60.40.730 1 38 9.7E-8 T 22-04-2016 SMGD1_RS03450 8bc4b1a05d7ef5cced357b716f8029d8 219 SUPERFAMILY SSF57802 178 212 5.07E-10 T 22-04-2016 SMGD1_RS03450 8bc4b1a05d7ef5cced357b716f8029d8 219 Gene3D G3DSA:2.20.28.10 177 215 8.0E-16 T 22-04-2016 IPR004039 Rubredoxin-type fold SMGD1_RS03450 8bc4b1a05d7ef5cced357b716f8029d8 219 SUPERFAMILY SSF57802 2 36 6.04E-11 T 22-04-2016 SMGD1_RS03450 8bc4b1a05d7ef5cced357b716f8029d8 219 Pfam PF02915 Rubrerythrin 44 165 2.2E-25 T 22-04-2016 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 SMGD1_RS03450 8bc4b1a05d7ef5cced357b716f8029d8 219 PANTHER PTHR33746:SF1 31 216 2.8E-62 T 22-04-2016 SMGD1_RS01110 f40cf890f85b942347bdd782c6e86498 504 Pfam PF00563 EAL domain 273 501 1.1E-55 T 22-04-2016 IPR001633 EAL domain SMGD1_RS01110 f40cf890f85b942347bdd782c6e86498 504 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 10 107 8.3E-14 T 22-04-2016 IPR000014 PAS domain SMGD1_RS01110 f40cf890f85b942347bdd782c6e86498 504 SUPERFAMILY SSF141868 273 501 2.75E-64 T 22-04-2016 IPR001633 EAL domain SMGD1_RS01110 f40cf890f85b942347bdd782c6e86498 504 Gene3D G3DSA:3.20.20.450 270 502 1.2E-61 T 22-04-2016 IPR001633 EAL domain SMGD1_RS01110 f40cf890f85b942347bdd782c6e86498 504 PANTHER PTHR33121 259 501 2.9E-53 T 22-04-2016 SMGD1_RS01110 f40cf890f85b942347bdd782c6e86498 504 SMART SM00052 266 503 3.9E-44 T 22-04-2016 IPR001633 EAL domain SMGD1_RS01110 f40cf890f85b942347bdd782c6e86498 504 Pfam PF13426 PAS domain 13 107 2.8E-9 T 22-04-2016 IPR000014 PAS domain SMGD1_RS01110 f40cf890f85b942347bdd782c6e86498 504 PANTHER PTHR33121:SF10 259 501 2.9E-53 T 22-04-2016 SMGD1_RS01110 f40cf890f85b942347bdd782c6e86498 504 Gene3D G3DSA:3.30.450.20 9 107 2.0E-18 T 22-04-2016 SMGD1_RS01110 f40cf890f85b942347bdd782c6e86498 504 SUPERFAMILY SSF55785 9 105 9.77E-19 T 22-04-2016 IPR000014 PAS domain SMGD1_RS03835 96ae73ee891d0d867aa545dae63f26eb 78 Pfam PF13083 KH domain 4 75 1.1E-19 T 22-04-2016 SMGD1_RS03835 96ae73ee891d0d867aa545dae63f26eb 78 Gene3D G3DSA:3.30.300.120 12 63 3.3E-6 T 22-04-2016 SMGD1_RS05265 59738db567fe137b565eaebad6752316 278 Gene3D G3DSA:1.20.1330.10 55 234 9.6E-51 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SMGD1_RS05265 59738db567fe137b565eaebad6752316 278 SUPERFAMILY SSF64518 1 278 1.12E-76 T 22-04-2016 SMGD1_RS05265 59738db567fe137b565eaebad6752316 278 PANTHER PTHR30244 3 278 6.9E-86 T 22-04-2016 SMGD1_RS05265 59738db567fe137b565eaebad6752316 278 PANTHER PTHR30244:SF1 3 278 6.9E-86 T 22-04-2016 SMGD1_RS05265 59738db567fe137b565eaebad6752316 278 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 6.0E-38 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SMGD1_RS05265 59738db567fe137b565eaebad6752316 278 PRINTS PR00207 Flagellin signature 37 54 1.6E-20 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 SMGD1_RS05265 59738db567fe137b565eaebad6752316 278 PRINTS PR00207 Flagellin signature 111 134 1.6E-20 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 SMGD1_RS05265 59738db567fe137b565eaebad6752316 278 PRINTS PR00207 Flagellin signature 76 95 1.6E-20 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 SMGD1_RS05265 59738db567fe137b565eaebad6752316 278 Pfam PF00700 Bacterial flagellin C-terminal helical region 193 277 2.7E-26 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SMGD1_RS12105 bff92eac5d3bb37ffd8dc828460f78d4 75 Hamap MF_00404 Probable oxaloacetate decarboxylase gamma chain [oadG]. 1 75 23.552 T 22-04-2016 IPR023424 Oxaloacetate decarboxylase gamma chain, probable GO:0008948 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 SMGD1_RS12105 bff92eac5d3bb37ffd8dc828460f78d4 75 TIGRFAM TIGR01195 oadG_fam: sodium pump decarboxylases, gamma subunit 5 73 5.0E-18 T 22-04-2016 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0071436 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 SMGD1_RS12105 bff92eac5d3bb37ffd8dc828460f78d4 75 Pfam PF04277 Oxaloacetate decarboxylase, gamma chain 8 73 2.5E-14 T 22-04-2016 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0071436 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 SMGD1_RS13245 27f2dc1e3e45e6affa897946e71bd4ee 465 Gene3D G3DSA:1.10.40.30 405 463 5.5E-30 T 22-04-2016 SMGD1_RS13245 27f2dc1e3e45e6affa897946e71bd4ee 465 Gene3D G3DSA:1.20.200.10 139 400 5.4E-106 T 22-04-2016 SMGD1_RS13245 27f2dc1e3e45e6affa897946e71bd4ee 465 Hamap MF_00743 Fumarate hydratase class II [fumC]. 4 462 86.362 T 22-04-2016 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 SMGD1_RS13245 27f2dc1e3e45e6affa897946e71bd4ee 465 Pfam PF00206 Lyase 12 342 3.1E-107 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal SMGD1_RS13245 27f2dc1e3e45e6affa897946e71bd4ee 465 ProSitePatterns PS00163 Fumarate lyases signature. 317 326 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 SMGD1_RS13245 27f2dc1e3e45e6affa897946e71bd4ee 465 SUPERFAMILY SSF48557 4 460 6.28E-150 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 SMGD1_RS13245 27f2dc1e3e45e6affa897946e71bd4ee 465 PRINTS PR00145 Argininosuccinate lyase family signature 317 333 3.8E-5 T 22-04-2016 SMGD1_RS13245 27f2dc1e3e45e6affa897946e71bd4ee 465 PRINTS PR00145 Argininosuccinate lyase family signature 133 155 3.8E-5 T 22-04-2016 SMGD1_RS13245 27f2dc1e3e45e6affa897946e71bd4ee 465 PRINTS PR00145 Argininosuccinate lyase family signature 175 195 3.8E-5 T 22-04-2016 SMGD1_RS13245 27f2dc1e3e45e6affa897946e71bd4ee 465 Pfam PF10415 Fumarase C C-terminus 408 460 2.1E-24 T 22-04-2016 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 SMGD1_RS13245 27f2dc1e3e45e6affa897946e71bd4ee 465 PANTHER PTHR11444 1 464 5.4E-252 T 22-04-2016 IPR000362 Fumarate lyase family SMGD1_RS13245 27f2dc1e3e45e6affa897946e71bd4ee 465 PANTHER PTHR11444:SF1 1 464 5.4E-252 T 22-04-2016 SMGD1_RS13245 27f2dc1e3e45e6affa897946e71bd4ee 465 Gene3D G3DSA:1.10.275.10 3 138 2.4E-57 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal SMGD1_RS13245 27f2dc1e3e45e6affa897946e71bd4ee 465 PRINTS PR00149 Fumarate lyase superfamily signature 317 333 2.1E-35 T 22-04-2016 IPR000362 Fumarate lyase family SMGD1_RS13245 27f2dc1e3e45e6affa897946e71bd4ee 465 PRINTS PR00149 Fumarate lyase superfamily signature 180 198 2.1E-35 T 22-04-2016 IPR000362 Fumarate lyase family SMGD1_RS13245 27f2dc1e3e45e6affa897946e71bd4ee 465 PRINTS PR00149 Fumarate lyase superfamily signature 271 298 2.1E-35 T 22-04-2016 IPR000362 Fumarate lyase family SMGD1_RS13245 27f2dc1e3e45e6affa897946e71bd4ee 465 PRINTS PR00149 Fumarate lyase superfamily signature 134 152 2.1E-35 T 22-04-2016 IPR000362 Fumarate lyase family SMGD1_RS13245 27f2dc1e3e45e6affa897946e71bd4ee 465 TIGRFAM TIGR00979 fumC_II: fumarate hydratase, class II 4 461 3.7E-227 T 22-04-2016 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 SMGD1_RS02445 7d0b650b6875549652fc93625c81227a 296 Gene3D G3DSA:3.40.50.300 3 287 2.9E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS02445 7d0b650b6875549652fc93625c81227a 296 SUPERFAMILY SSF52540 2 192 4.91E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS13050 ea340dea0cb66fba6d0be36be8c77dfc 305 Pfam PF02833 DHHA2 domain 180 302 7.8E-21 T 22-04-2016 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1 SMGD1_RS13050 ea340dea0cb66fba6d0be36be8c77dfc 305 SMART SM01131 179 305 1.8E-54 T 22-04-2016 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1 SMGD1_RS13050 ea340dea0cb66fba6d0be36be8c77dfc 305 PANTHER PTHR12112 1 305 3.4E-133 T 22-04-2016 SMGD1_RS13050 ea340dea0cb66fba6d0be36be8c77dfc 305 Gene3D G3DSA:3.90.1640.10 3 183 7.8E-54 T 22-04-2016 SMGD1_RS13050 ea340dea0cb66fba6d0be36be8c77dfc 305 SUPERFAMILY SSF64182 3 304 8.5E-71 T 22-04-2016 SMGD1_RS13050 ea340dea0cb66fba6d0be36be8c77dfc 305 Pfam PF01368 DHH family 3 143 1.9E-16 T 22-04-2016 IPR001667 DDH domain SMGD1_RS13050 ea340dea0cb66fba6d0be36be8c77dfc 305 PANTHER PTHR12112:SF23 1 305 3.4E-133 T 22-04-2016 SMGD1_RS04680 b3f5a15db865c2d7b7d8572ee2b42adc 208 SUPERFAMILY SSF55174 2 208 1.53E-68 T 22-04-2016 SMGD1_RS04680 b3f5a15db865c2d7b7d8572ee2b42adc 208 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 208 35.875 T 22-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 SMGD1_RS04680 b3f5a15db865c2d7b7d8572ee2b42adc 208 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 97 3.8E-25 T 22-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 SMGD1_RS04680 b3f5a15db865c2d7b7d8572ee2b42adc 208 Gene3D G3DSA:3.10.290.10 102 199 8.3E-32 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SMGD1_RS04680 b3f5a15db865c2d7b7d8572ee2b42adc 208 Pfam PF01479 S4 domain 99 145 3.0E-20 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SMGD1_RS04680 b3f5a15db865c2d7b7d8572ee2b42adc 208 PANTHER PTHR11831:SF4 1 208 4.6E-78 T 22-04-2016 SMGD1_RS04680 b3f5a15db865c2d7b7d8572ee2b42adc 208 ProSitePatterns PS00632 Ribosomal protein S4 signature. 96 120 - T 22-04-2016 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 SMGD1_RS04680 b3f5a15db865c2d7b7d8572ee2b42adc 208 SMART SM00363 98 157 1.6E-19 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SMGD1_RS04680 b3f5a15db865c2d7b7d8572ee2b42adc 208 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 208 7.4E-82 T 22-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 SMGD1_RS04680 b3f5a15db865c2d7b7d8572ee2b42adc 208 PANTHER PTHR11831 1 208 4.6E-78 T 22-04-2016 IPR022801 Ribosomal protein S4/S9 SMGD1_RS04680 b3f5a15db865c2d7b7d8572ee2b42adc 208 SMART SM01390 3 97 6.3E-44 T 22-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 SMGD1_RS04680 b3f5a15db865c2d7b7d8572ee2b42adc 208 Gene3D G3DSA:1.10.1050.10 1 101 1.4E-41 T 22-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 SMGD1_RS08045 dad3178272e7dc20fe6a932e7c817eb3 223 PANTHER PTHR10010:SF14 1 223 7.8E-16 T 22-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 SMGD1_RS08045 dad3178272e7dc20fe6a932e7c817eb3 223 Gene3D G3DSA:1.20.58.220 131 221 1.5E-12 T 22-04-2016 SMGD1_RS08045 dad3178272e7dc20fe6a932e7c817eb3 223 Gene3D G3DSA:1.20.58.220 1 102 1.1E-11 T 22-04-2016 SMGD1_RS08045 dad3178272e7dc20fe6a932e7c817eb3 223 Pfam PF01895 PhoU domain 122 209 1.5E-6 T 22-04-2016 IPR026022 PhoU domain SMGD1_RS08045 dad3178272e7dc20fe6a932e7c817eb3 223 Pfam PF01895 PhoU domain 30 98 4.1E-6 T 22-04-2016 IPR026022 PhoU domain SMGD1_RS08045 dad3178272e7dc20fe6a932e7c817eb3 223 SUPERFAMILY SSF109755 4 222 2.3E-28 T 22-04-2016 SMGD1_RS08045 dad3178272e7dc20fe6a932e7c817eb3 223 PANTHER PTHR10010 1 223 7.8E-16 T 22-04-2016 SMGD1_RS02760 1819512e096c0afa5000782d91523ccf 501 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 364 471 6.7E-23 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 SMGD1_RS02760 1819512e096c0afa5000782d91523ccf 501 PANTHER PTHR22912 4 476 4.5E-109 T 22-04-2016 SMGD1_RS02760 1819512e096c0afa5000782d91523ccf 501 PIRSF PIRSF000350 1 481 6.7E-63 T 22-04-2016 SMGD1_RS02760 1819512e096c0afa5000782d91523ccf 501 PANTHER PTHR22912:SF103 4 476 4.5E-109 T 22-04-2016 SMGD1_RS02760 1819512e096c0afa5000782d91523ccf 501 Gene3D G3DSA:3.50.50.60 13 156 3.0E-20 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS02760 1819512e096c0afa5000782d91523ccf 501 SUPERFAMILY SSF51905 10 91 1.45E-41 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS02760 1819512e096c0afa5000782d91523ccf 501 SUPERFAMILY SSF51905 140 351 1.45E-41 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS02760 1819512e096c0afa5000782d91523ccf 501 SUPERFAMILY SSF55424 360 483 7.73E-29 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 SMGD1_RS02760 1819512e096c0afa5000782d91523ccf 501 Gene3D G3DSA:3.30.390.30 358 476 1.0E-29 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 SMGD1_RS02760 1819512e096c0afa5000782d91523ccf 501 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 323 330 1.1E-44 T 22-04-2016 SMGD1_RS02760 1819512e096c0afa5000782d91523ccf 501 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 447 467 1.1E-44 T 22-04-2016 SMGD1_RS02760 1819512e096c0afa5000782d91523ccf 501 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 359 380 1.1E-44 T 22-04-2016 SMGD1_RS02760 1819512e096c0afa5000782d91523ccf 501 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 15 37 1.1E-44 T 22-04-2016 SMGD1_RS02760 1819512e096c0afa5000782d91523ccf 501 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 47 62 1.1E-44 T 22-04-2016 SMGD1_RS02760 1819512e096c0afa5000782d91523ccf 501 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 281 295 1.1E-44 T 22-04-2016 SMGD1_RS02760 1819512e096c0afa5000782d91523ccf 501 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 425 440 1.1E-44 T 22-04-2016 SMGD1_RS02760 1819512e096c0afa5000782d91523ccf 501 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 155 164 1.1E-44 T 22-04-2016 SMGD1_RS02760 1819512e096c0afa5000782d91523ccf 501 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 191 216 1.1E-44 T 22-04-2016 SMGD1_RS02760 1819512e096c0afa5000782d91523ccf 501 Gene3D G3DSA:3.50.50.60 157 350 7.4E-37 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS02760 1819512e096c0afa5000782d91523ccf 501 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 14 343 6.8E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS02760 1819512e096c0afa5000782d91523ccf 501 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 280 296 1.7E-24 T 22-04-2016 SMGD1_RS02760 1819512e096c0afa5000782d91523ccf 501 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 152 170 1.7E-24 T 22-04-2016 SMGD1_RS02760 1819512e096c0afa5000782d91523ccf 501 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 308 330 1.7E-24 T 22-04-2016 SMGD1_RS02760 1819512e096c0afa5000782d91523ccf 501 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 191 209 1.7E-24 T 22-04-2016 SMGD1_RS02760 1819512e096c0afa5000782d91523ccf 501 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 16 35 1.7E-24 T 22-04-2016 SMGD1_RS02170 e028b6840e2e4de169358b68eb079606 604 Gene3D G3DSA:3.10.580.10 145 263 5.9E-15 T 22-04-2016 SMGD1_RS02170 e028b6840e2e4de169358b68eb079606 604 Gene3D G3DSA:2.60.120.10 6 131 1.4E-11 T 22-04-2016 IPR014710 RmlC-like jelly roll fold SMGD1_RS02170 e028b6840e2e4de169358b68eb079606 604 Pfam PF03445 Putative nucleotidyltransferase DUF294 291 419 5.6E-34 T 22-04-2016 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 SMGD1_RS02170 e028b6840e2e4de169358b68eb079606 604 Pfam PF00027 Cyclic nucleotide-binding domain 35 114 1.8E-6 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain SMGD1_RS02170 e028b6840e2e4de169358b68eb079606 604 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 459 598 2.0E-42 T 22-04-2016 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding SMGD1_RS02170 e028b6840e2e4de169358b68eb079606 604 SUPERFAMILY SSF54631 147 267 5.37E-16 T 22-04-2016 SMGD1_RS02170 e028b6840e2e4de169358b68eb079606 604 SUPERFAMILY SSF51206 7 120 1.13E-13 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like SMGD1_RS04775 4056a8f3e3042f900519507bbf89c77d 405 PANTHER PTHR10314:SF3 14 398 5.7E-180 T 22-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 SMGD1_RS04775 4056a8f3e3042f900519507bbf89c77d 405 SUPERFAMILY SSF53686 10 395 1.09E-134 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SMGD1_RS04775 4056a8f3e3042f900519507bbf89c77d 405 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 60 385 1.5E-41 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SMGD1_RS04775 4056a8f3e3042f900519507bbf89c77d 405 Gene3D G3DSA:3.40.50.1100 107 178 1.2E-15 T 22-04-2016 SMGD1_RS04775 4056a8f3e3042f900519507bbf89c77d 405 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 9 398 47.509 T 22-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 SMGD1_RS04775 4056a8f3e3042f900519507bbf89c77d 405 PANTHER PTHR10314 14 398 5.7E-180 T 22-04-2016 SMGD1_RS04775 4056a8f3e3042f900519507bbf89c77d 405 Gene3D G3DSA:3.40.50.1100 179 396 7.1E-80 T 22-04-2016 SMGD1_RS04775 4056a8f3e3042f900519507bbf89c77d 405 PIRSF PIRSF001413 2 402 3.3E-154 T 22-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 SMGD1_RS04775 4056a8f3e3042f900519507bbf89c77d 405 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 88 102 - T 22-04-2016 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 SMGD1_RS04775 4056a8f3e3042f900519507bbf89c77d 405 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 14 396 6.6E-161 T 22-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 SMGD1_RS08775 adb7bd3eab06c76f4c4843a39dc9721f 49 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 49 14.471 T 22-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 SMGD1_RS08775 adb7bd3eab06c76f4c4843a39dc9721f 49 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 49 5.8E-16 T 22-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 SMGD1_RS08775 adb7bd3eab06c76f4c4843a39dc9721f 49 Pfam PF01783 Ribosomal L32p protein family 2 49 9.3E-13 T 22-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 SMGD1_RS08775 adb7bd3eab06c76f4c4843a39dc9721f 49 SUPERFAMILY SSF57829 1 49 5.8E-13 T 22-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 SMGD1_RS13315 91968373edbaf24e3f6394460a56e9d5 390 Gene3D G3DSA:3.30.470.20 96 240 3.4E-52 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SMGD1_RS13315 91968373edbaf24e3f6394460a56e9d5 390 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 258 282 - T 22-04-2016 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 SMGD1_RS13315 91968373edbaf24e3f6394460a56e9d5 390 SUPERFAMILY SSF56059 1 239 2.65E-74 T 22-04-2016 SMGD1_RS13315 91968373edbaf24e3f6394460a56e9d5 390 Pfam PF08442 ATP-grasp domain 2 203 1.8E-74 T 22-04-2016 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 SMGD1_RS13315 91968373edbaf24e3f6394460a56e9d5 390 Gene3D G3DSA:3.30.1490.20 21 95 3.6E-31 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SMGD1_RS13315 91968373edbaf24e3f6394460a56e9d5 390 Pfam PF00549 CoA-ligase 263 367 3.2E-19 T 22-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 SMGD1_RS13315 91968373edbaf24e3f6394460a56e9d5 390 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 387 5.0E-145 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 SMGD1_RS13315 91968373edbaf24e3f6394460a56e9d5 390 SUPERFAMILY SSF52210 243 387 6.02E-48 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 SMGD1_RS13315 91968373edbaf24e3f6394460a56e9d5 390 PIRSF PIRSF001554 1 390 1.5E-143 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 SMGD1_RS13315 91968373edbaf24e3f6394460a56e9d5 390 PANTHER PTHR11815 1 390 1.1E-199 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 SMGD1_RS13315 91968373edbaf24e3f6394460a56e9d5 390 Gene3D G3DSA:3.40.50.261 243 385 2.0E-57 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 SMGD1_RS13315 91968373edbaf24e3f6394460a56e9d5 390 Hamap MF_00558 Succinyl-CoA ligase [ADP-forming] subunit beta [sucC]. 1 388 39.443 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 SMGD1_RS10900 97f9b1815d71d38b8d59d78630d6380f 293 SUPERFAMILY SSF54211 2 147 4.17E-27 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SMGD1_RS10900 97f9b1815d71d38b8d59d78630d6380f 293 Gene3D G3DSA:3.30.230.10 2 150 1.6E-45 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SMGD1_RS10900 97f9b1815d71d38b8d59d78630d6380f 293 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 83 94 - T 22-04-2016 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 SMGD1_RS10900 97f9b1815d71d38b8d59d78630d6380f 293 PANTHER PTHR20861 1 280 3.7E-64 T 22-04-2016 SMGD1_RS10900 97f9b1815d71d38b8d59d78630d6380f 293 SUPERFAMILY SSF55060 159 280 7.55E-28 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain SMGD1_RS10900 97f9b1815d71d38b8d59d78630d6380f 293 TIGRFAM TIGR00191 thrB: homoserine kinase 1 292 6.4E-82 T 22-04-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 SMGD1_RS10900 97f9b1815d71d38b8d59d78630d6380f 293 Hamap MF_00384 Homoserine kinase [thrB]. 1 291 28.077 T 22-04-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 SMGD1_RS10900 97f9b1815d71d38b8d59d78630d6380f 293 Pfam PF08544 GHMP kinases C terminal 201 275 2.4E-5 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain SMGD1_RS10900 97f9b1815d71d38b8d59d78630d6380f 293 Pfam PF00288 GHMP kinases N terminal domain 77 137 1.3E-8 T 22-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 SMGD1_RS10900 97f9b1815d71d38b8d59d78630d6380f 293 PRINTS PR00958 Homoserine kinase signature 163 180 2.9E-31 T 22-04-2016 SMGD1_RS10900 97f9b1815d71d38b8d59d78630d6380f 293 PRINTS PR00958 Homoserine kinase signature 8 23 2.9E-31 T 22-04-2016 SMGD1_RS10900 97f9b1815d71d38b8d59d78630d6380f 293 PRINTS PR00958 Homoserine kinase signature 124 137 2.9E-31 T 22-04-2016 SMGD1_RS10900 97f9b1815d71d38b8d59d78630d6380f 293 PRINTS PR00958 Homoserine kinase signature 90 105 2.9E-31 T 22-04-2016 SMGD1_RS10900 97f9b1815d71d38b8d59d78630d6380f 293 PRINTS PR00958 Homoserine kinase signature 242 257 2.9E-31 T 22-04-2016 SMGD1_RS10900 97f9b1815d71d38b8d59d78630d6380f 293 PIRSF PIRSF000676 1 293 2.1E-79 T 22-04-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 SMGD1_RS10900 97f9b1815d71d38b8d59d78630d6380f 293 PANTHER PTHR20861:SF1 1 280 3.7E-64 T 22-04-2016 SMGD1_RS10900 97f9b1815d71d38b8d59d78630d6380f 293 Gene3D G3DSA:3.30.70.890 157 287 1.8E-34 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain SMGD1_RS11950 f67a784a8b6e7994ea725f756ee64dda 362 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 122 359 1.3E-50 T 22-04-2016 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 SMGD1_RS11950 f67a784a8b6e7994ea725f756ee64dda 362 SUPERFAMILY SSF56762 18 361 4.58E-92 T 22-04-2016 IPR029014 NiFe hydrogenase-like SMGD1_RS11950 f67a784a8b6e7994ea725f756ee64dda 362 PANTHER PTHR11993 1 360 6.5E-106 T 22-04-2016 SMGD1_RS11950 f67a784a8b6e7994ea725f756ee64dda 362 Pfam PF00374 Nickel-dependent hydrogenase 44 113 3.5E-9 T 22-04-2016 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 SMGD1_RS11950 f67a784a8b6e7994ea725f756ee64dda 362 Gene3D G3DSA:1.10.645.10 3 223 2.7E-38 T 22-04-2016 IPR029014 NiFe hydrogenase-like SMGD1_RS11950 f67a784a8b6e7994ea725f756ee64dda 362 Gene3D G3DSA:1.10.645.10 224 361 6.4E-28 T 22-04-2016 IPR029014 NiFe hydrogenase-like SMGD1_RS11950 f67a784a8b6e7994ea725f756ee64dda 362 PANTHER PTHR11993:SF29 1 360 6.5E-106 T 22-04-2016 SMGD1_RS03060 e27fe4e179c6aea2819d7fca6479d6c9 413 PANTHER PTHR30026:SF4 1 413 1.3E-39 T 22-04-2016 SMGD1_RS03060 e27fe4e179c6aea2819d7fca6479d6c9 413 Pfam PF02321 Outer membrane efflux protein 225 410 2.2E-17 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SMGD1_RS03060 e27fe4e179c6aea2819d7fca6479d6c9 413 Pfam PF02321 Outer membrane efflux protein 19 200 4.6E-28 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SMGD1_RS03060 e27fe4e179c6aea2819d7fca6479d6c9 413 Gene3D G3DSA:1.20.1600.10 17 409 1.9E-51 T 22-04-2016 SMGD1_RS03060 e27fe4e179c6aea2819d7fca6479d6c9 413 PANTHER PTHR30026 1 413 1.3E-39 T 22-04-2016 SMGD1_RS03060 e27fe4e179c6aea2819d7fca6479d6c9 413 SUPERFAMILY SSF56954 5 410 6.54E-63 T 22-04-2016 SMGD1_RS06995 08083246f414ed8091fbe8d91a901c64 357 SUPERFAMILY SSF53901 171 352 8.57E-47 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SMGD1_RS06995 08083246f414ed8091fbe8d91a901c64 357 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 206 314 4.2E-32 T 22-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal SMGD1_RS06995 08083246f414ed8091fbe8d91a901c64 357 SMART SM00825 Beta-ketoacyl synthase 6 351 1.5E-5 T 22-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain SMGD1_RS06995 08083246f414ed8091fbe8d91a901c64 357 PANTHER PTHR11712 120 351 2.7E-58 T 22-04-2016 SMGD1_RS06995 08083246f414ed8091fbe8d91a901c64 357 Gene3D G3DSA:3.40.47.10 211 354 7.0E-50 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SMGD1_RS06995 08083246f414ed8091fbe8d91a901c64 357 SUPERFAMILY SSF53901 13 197 1.0E-19 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SMGD1_RS06995 08083246f414ed8091fbe8d91a901c64 357 Gene3D G3DSA:3.40.47.10 47 198 9.8E-20 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SMGD1_RS06995 08083246f414ed8091fbe8d91a901c64 357 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 47 196 1.6E-14 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal SMGD1_RS13935 c1a5309d475729852d2ac44d6ee50d05 570 Gene3D G3DSA:4.10.80.40 525 559 8.0E-17 T 22-04-2016 SMGD1_RS13935 c1a5309d475729852d2ac44d6ee50d05 570 SUPERFAMILY SSF51905 5 249 2.24E-74 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS13935 c1a5309d475729852d2ac44d6ee50d05 570 SUPERFAMILY SSF51905 348 414 2.24E-74 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS13935 c1a5309d475729852d2ac44d6ee50d05 570 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 22-04-2016 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 SMGD1_RS13935 c1a5309d475729852d2ac44d6ee50d05 570 PANTHER PTHR11632:SF5 1 570 5.9E-282 T 22-04-2016 SMGD1_RS13935 c1a5309d475729852d2ac44d6ee50d05 570 SUPERFAMILY SSF46977 435 570 8.24E-47 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 SMGD1_RS13935 c1a5309d475729852d2ac44d6ee50d05 570 Pfam PF02910 Fumarate reductase flavoprotein C-term 444 570 7.7E-42 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 SMGD1_RS13935 c1a5309d475729852d2ac44d6ee50d05 570 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 7 560 1.0E-223 T 22-04-2016 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 SMGD1_RS13935 c1a5309d475729852d2ac44d6ee50d05 570 SUPERFAMILY SSF56425 226 344 2.09E-39 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain SMGD1_RS13935 c1a5309d475729852d2ac44d6ee50d05 570 PANTHER PTHR11632 1 570 5.9E-282 T 22-04-2016 SMGD1_RS13935 c1a5309d475729852d2ac44d6ee50d05 570 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 9 570 9.7E-234 T 22-04-2016 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 SMGD1_RS13935 c1a5309d475729852d2ac44d6ee50d05 570 Gene3D G3DSA:1.20.58.100 418 524 5.6E-37 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 SMGD1_RS13935 c1a5309d475729852d2ac44d6ee50d05 570 Gene3D G3DSA:3.90.700.10 233 338 1.8E-38 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain SMGD1_RS13935 c1a5309d475729852d2ac44d6ee50d05 570 Gene3D G3DSA:3.50.50.60 6 232 1.2E-110 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS13935 c1a5309d475729852d2ac44d6ee50d05 570 Gene3D G3DSA:3.50.50.60 340 410 1.2E-110 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS13935 c1a5309d475729852d2ac44d6ee50d05 570 Pfam PF00890 FAD binding domain 9 390 3.9E-113 T 22-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain SMGD1_RS13935 c1a5309d475729852d2ac44d6ee50d05 570 PIRSF PIRSF000171 1 561 7.2E-50 T 22-04-2016 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit SMGD1_RS05885 9ff5e6c6ae22c80d2b3739a862a5eedf 142 PANTHER PTHR10642 4 137 8.6E-40 T 22-04-2016 SMGD1_RS05885 9ff5e6c6ae22c80d2b3739a862a5eedf 142 SUPERFAMILY SSF53098 3 136 4.68E-45 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMGD1_RS05885 9ff5e6c6ae22c80d2b3739a862a5eedf 142 Pfam PF00075 RNase H 2 135 9.8E-39 T 22-04-2016 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 SMGD1_RS05885 9ff5e6c6ae22c80d2b3739a862a5eedf 142 Gene3D G3DSA:3.30.420.10 3 138 2.0E-47 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMGD1_RS03965 0ebf93e028d0bbbd32f3942ec79d83aa 104 PRINTS PR00124 ATP synthase C subunit signature 72 97 1.6E-14 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 SMGD1_RS03965 0ebf93e028d0bbbd32f3942ec79d83aa 104 PRINTS PR00124 ATP synthase C subunit signature 55 70 1.6E-14 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 SMGD1_RS03965 0ebf93e028d0bbbd32f3942ec79d83aa 104 PRINTS PR00124 ATP synthase C subunit signature 34 53 1.6E-14 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 SMGD1_RS03965 0ebf93e028d0bbbd32f3942ec79d83aa 104 Hamap MF_01396 ATP synthase subunit c [atpH]. 31 99 16.087 T 22-04-2016 SMGD1_RS03965 0ebf93e028d0bbbd32f3942ec79d83aa 104 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 42 99 1.2E-13 T 22-04-2016 IPR005953 ATPase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 SMGD1_RS03965 0ebf93e028d0bbbd32f3942ec79d83aa 104 Pfam PF00137 ATP synthase subunit C 33 95 7.7E-15 T 22-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 SMGD1_RS03965 0ebf93e028d0bbbd32f3942ec79d83aa 104 PANTHER PTHR10031 22 100 6.8E-16 T 22-04-2016 SMGD1_RS03965 0ebf93e028d0bbbd32f3942ec79d83aa 104 Gene3D G3DSA:1.20.20.10 31 98 7.1E-22 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 SMGD1_RS03965 0ebf93e028d0bbbd32f3942ec79d83aa 104 SUPERFAMILY SSF81333 26 101 7.32E-19 T 22-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 SMGD1_RS03965 0ebf93e028d0bbbd32f3942ec79d83aa 104 ProSitePatterns PS00605 ATP synthase c subunit signature. 62 83 - T 22-04-2016 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site SMGD1_RS01905 38a5b90e0de3eae4e1cbee0edcadb7d7 133 Pfam PF02082 Transcriptional regulator 1 81 3.0E-20 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type SMGD1_RS01905 38a5b90e0de3eae4e1cbee0edcadb7d7 133 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 47 65 - T 22-04-2016 IPR030489 Transcription regulator Rrf2-type, conserved site SMGD1_RS01905 38a5b90e0de3eae4e1cbee0edcadb7d7 133 Gene3D G3DSA:1.10.10.10 1 133 5.6E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMGD1_RS01905 38a5b90e0de3eae4e1cbee0edcadb7d7 133 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 132 1.5E-31 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type SMGD1_RS01905 38a5b90e0de3eae4e1cbee0edcadb7d7 133 SUPERFAMILY SSF46785 7 132 5.11E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMGD1_RS01905 38a5b90e0de3eae4e1cbee0edcadb7d7 133 PANTHER PTHR33221 3 133 2.8E-32 T 22-04-2016 SMGD1_RS01905 38a5b90e0de3eae4e1cbee0edcadb7d7 133 PANTHER PTHR33221:SF2 3 133 2.8E-32 T 22-04-2016 SMGD1_RS04010 bec588418fac06d0c0a24b983813ba65 482 Pfam PF02910 Fumarate reductase flavoprotein C-term 413 445 2.0E-5 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 SMGD1_RS04010 bec588418fac06d0c0a24b983813ba65 482 PANTHER PTHR11632 2 475 1.1E-158 T 22-04-2016 SMGD1_RS04010 bec588418fac06d0c0a24b983813ba65 482 PANTHER PTHR11632:SF27 2 475 1.1E-158 T 22-04-2016 SMGD1_RS04010 bec588418fac06d0c0a24b983813ba65 482 Pfam PF00890 FAD binding domain 4 370 2.6E-75 T 22-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain SMGD1_RS04010 bec588418fac06d0c0a24b983813ba65 482 Gene3D G3DSA:3.50.50.60 2 220 2.5E-79 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS04010 bec588418fac06d0c0a24b983813ba65 482 Gene3D G3DSA:3.50.50.60 326 391 2.5E-79 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS04010 bec588418fac06d0c0a24b983813ba65 482 SUPERFAMILY SSF56425 215 329 4.93E-31 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain SMGD1_RS04010 bec588418fac06d0c0a24b983813ba65 482 SUPERFAMILY SSF46977 412 476 2.49E-13 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 SMGD1_RS04010 bec588418fac06d0c0a24b983813ba65 482 Gene3D G3DSA:1.20.58.100 410 476 1.0E-10 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 SMGD1_RS04010 bec588418fac06d0c0a24b983813ba65 482 Gene3D G3DSA:3.90.700.10 221 325 4.9E-27 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain SMGD1_RS04010 bec588418fac06d0c0a24b983813ba65 482 SUPERFAMILY SSF51905 2 242 1.8E-50 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS04010 bec588418fac06d0c0a24b983813ba65 482 SUPERFAMILY SSF51905 333 389 1.8E-50 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS04010 bec588418fac06d0c0a24b983813ba65 482 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 2 477 3.0E-141 T 22-04-2016 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 SMGD1_RS03080 e967912538037ea86d258a27617933e8 453 Hamap MF_01884 Transcription termination factor Rho [rho]. 37 453 212.655 T 22-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 SMGD1_RS03080 e967912538037ea86d258a27617933e8 453 PANTHER PTHR15184 38 113 9.3E-177 T 22-04-2016 SMGD1_RS03080 e967912538037ea86d258a27617933e8 453 PANTHER PTHR15184 137 432 9.3E-177 T 22-04-2016 SMGD1_RS03080 e967912538037ea86d258a27617933e8 453 Pfam PF07497 Rho termination factor, RNA-binding domain 87 160 1.3E-29 T 22-04-2016 IPR011113 Rho termination factor, RNA-binding GO:0003723|GO:0006353 SMGD1_RS03080 e967912538037ea86d258a27617933e8 453 Gene3D G3DSA:3.40.50.300 167 450 2.8E-95 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS03080 e967912538037ea86d258a27617933e8 453 TIGRFAM TIGR00767 rho: transcription termination factor Rho 37 450 2.1E-202 T 22-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 SMGD1_RS03080 e967912538037ea86d258a27617933e8 453 Gene3D G3DSA:2.40.50.140 84 152 1.4E-29 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMGD1_RS03080 e967912538037ea86d258a27617933e8 453 SMART SM00382 202 396 5.5E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain SMGD1_RS03080 e967912538037ea86d258a27617933e8 453 Gene3D G3DSA:1.10.720.10 38 82 2.5E-17 T 22-04-2016 SMGD1_RS03080 e967912538037ea86d258a27617933e8 453 SMART SM00357 87 153 1.8E-13 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 SMGD1_RS03080 e967912538037ea86d258a27617933e8 453 SUPERFAMILY SSF50249 84 160 4.06E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMGD1_RS03080 e967912538037ea86d258a27617933e8 453 Pfam PF07498 Rho termination factor, N-terminal domain 40 82 1.0E-15 T 22-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 SMGD1_RS03080 e967912538037ea86d258a27617933e8 453 SUPERFAMILY SSF68912 38 82 4.71E-10 T 22-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 SMGD1_RS03080 e967912538037ea86d258a27617933e8 453 PANTHER PTHR15184:SF34 38 113 9.3E-177 T 22-04-2016 SMGD1_RS03080 e967912538037ea86d258a27617933e8 453 PANTHER PTHR15184:SF34 137 432 9.3E-177 T 22-04-2016 SMGD1_RS03080 e967912538037ea86d258a27617933e8 453 SUPERFAMILY SSF52540 126 403 5.77E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS03080 e967912538037ea86d258a27617933e8 453 SMART SM00959 40 82 2.0E-15 T 22-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 SMGD1_RS03080 e967912538037ea86d258a27617933e8 453 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 192 395 1.9E-19 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SMGD1_RS07370 343536a5ba8a1f22ce663217f63afb4e 272 SUPERFAMILY SSF53098 104 242 7.21E-35 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMGD1_RS07370 343536a5ba8a1f22ce663217f63afb4e 272 Pfam PF00075 RNase H 103 243 8.0E-29 T 22-04-2016 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 SMGD1_RS07370 343536a5ba8a1f22ce663217f63afb4e 272 PANTHER PTHR10642 69 242 3.3E-29 T 22-04-2016 SMGD1_RS07370 343536a5ba8a1f22ce663217f63afb4e 272 Gene3D G3DSA:3.30.420.10 100 242 2.7E-35 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMGD1_RS13735 21734422f41167a4b924e54a1d86fc93 388 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 37 365 7.8E-75 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 SMGD1_RS13735 21734422f41167a4b924e54a1d86fc93 388 Gene3D G3DSA:2.40.50.100 64 95 2.0E-18 T 22-04-2016 SMGD1_RS13735 21734422f41167a4b924e54a1d86fc93 388 Gene3D G3DSA:2.40.50.100 170 203 2.0E-18 T 22-04-2016 SMGD1_RS13735 21734422f41167a4b924e54a1d86fc93 388 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 63 284 9.6E-15 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SMGD1_RS13735 21734422f41167a4b924e54a1d86fc93 388 PANTHER PTHR30158 22 365 1.4E-88 T 22-04-2016 SMGD1_RS13735 21734422f41167a4b924e54a1d86fc93 388 SUPERFAMILY SSF111369 51 288 2.62E-53 T 22-04-2016 SMGD1_RS06230 ecdb44188d2a69663a89c3d1b3d8af08 455 SMART SM00228 367 448 0.55 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SMGD1_RS06230 ecdb44188d2a69663a89c3d1b3d8af08 455 SMART SM00228 265 345 1.7E-12 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SMGD1_RS06230 ecdb44188d2a69663a89c3d1b3d8af08 455 PRINTS PR00834 HtrA/DegQ protease family signature 122 142 3.4E-55 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SMGD1_RS06230 ecdb44188d2a69663a89c3d1b3d8af08 455 PRINTS PR00834 HtrA/DegQ protease family signature 303 315 3.4E-55 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SMGD1_RS06230 ecdb44188d2a69663a89c3d1b3d8af08 455 PRINTS PR00834 HtrA/DegQ protease family signature 197 214 3.4E-55 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SMGD1_RS06230 ecdb44188d2a69663a89c3d1b3d8af08 455 PRINTS PR00834 HtrA/DegQ protease family signature 100 112 3.4E-55 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SMGD1_RS06230 ecdb44188d2a69663a89c3d1b3d8af08 455 PRINTS PR00834 HtrA/DegQ protease family signature 162 186 3.4E-55 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SMGD1_RS06230 ecdb44188d2a69663a89c3d1b3d8af08 455 PRINTS PR00834 HtrA/DegQ protease family signature 219 236 3.4E-55 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SMGD1_RS06230 ecdb44188d2a69663a89c3d1b3d8af08 455 SUPERFAMILY SSF50156 247 354 1.25E-20 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SMGD1_RS06230 ecdb44188d2a69663a89c3d1b3d8af08 455 SUPERFAMILY SSF50156 378 454 1.14E-8 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SMGD1_RS06230 ecdb44188d2a69663a89c3d1b3d8af08 455 Gene3D G3DSA:2.30.42.10 267 360 9.8E-22 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SMGD1_RS06230 ecdb44188d2a69663a89c3d1b3d8af08 455 Gene3D G3DSA:2.30.42.10 368 442 8.9E-9 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SMGD1_RS06230 ecdb44188d2a69663a89c3d1b3d8af08 455 Pfam PF13180 PDZ domain 265 354 2.9E-14 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SMGD1_RS06230 ecdb44188d2a69663a89c3d1b3d8af08 455 Gene3D G3DSA:2.40.10.10 42 157 3.6E-32 T 22-04-2016 SMGD1_RS06230 ecdb44188d2a69663a89c3d1b3d8af08 455 PANTHER PTHR22939 47 358 2.5E-99 T 22-04-2016 SMGD1_RS06230 ecdb44188d2a69663a89c3d1b3d8af08 455 Pfam PF13365 Trypsin-like peptidase domain 91 226 1.2E-32 T 22-04-2016 SMGD1_RS06230 ecdb44188d2a69663a89c3d1b3d8af08 455 PANTHER PTHR22939:SF98 47 358 2.5E-99 T 22-04-2016 SMGD1_RS06230 ecdb44188d2a69663a89c3d1b3d8af08 455 SUPERFAMILY SSF50494 45 261 2.63E-60 T 22-04-2016 IPR009003 Peptidase S1, PA clan SMGD1_RS06230 ecdb44188d2a69663a89c3d1b3d8af08 455 Gene3D G3DSA:2.40.10.10 158 266 2.5E-41 T 22-04-2016 SMGD1_RS04975 8354538d0b43b57edddf0aa48c8cc022 145 Pfam PF02391 MoaE protein 8 114 3.8E-13 T 22-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 SMGD1_RS04975 8354538d0b43b57edddf0aa48c8cc022 145 Gene3D G3DSA:3.90.1170.40 2 141 7.3E-32 T 22-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 SMGD1_RS04975 8354538d0b43b57edddf0aa48c8cc022 145 SUPERFAMILY SSF54690 10 138 5.23E-31 T 22-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 SMGD1_RS02845 81fa76af4b7530a975a08a2b8aa9ca50 341 SUPERFAMILY SSF53067 1 168 1.94E-56 T 22-04-2016 SMGD1_RS02845 81fa76af4b7530a975a08a2b8aa9ca50 341 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 177 194 - T 22-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SMGD1_RS02845 81fa76af4b7530a975a08a2b8aa9ca50 341 TIGRFAM TIGR00016 ackA: acetate kinase 57 333 9.3E-123 T 22-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SMGD1_RS02845 81fa76af4b7530a975a08a2b8aa9ca50 341 Gene3D G3DSA:3.30.420.40 179 340 3.1E-67 T 22-04-2016 SMGD1_RS02845 81fa76af4b7530a975a08a2b8aa9ca50 341 Hamap MF_00020 Acetate kinase [ackA]. 1 341 138.882 T 22-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SMGD1_RS02845 81fa76af4b7530a975a08a2b8aa9ca50 341 Pfam PF00871 Acetokinase family 3 319 7.1E-121 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SMGD1_RS02845 81fa76af4b7530a975a08a2b8aa9ca50 341 PANTHER PTHR21060:SF11 1 339 2.3E-160 T 22-04-2016 SMGD1_RS02845 81fa76af4b7530a975a08a2b8aa9ca50 341 SUPERFAMILY SSF53067 131 340 1.3E-76 T 22-04-2016 SMGD1_RS02845 81fa76af4b7530a975a08a2b8aa9ca50 341 PANTHER PTHR21060 1 339 2.3E-160 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SMGD1_RS02845 81fa76af4b7530a975a08a2b8aa9ca50 341 PRINTS PR00471 Acetate kinase family signature 270 283 1.5E-37 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SMGD1_RS02845 81fa76af4b7530a975a08a2b8aa9ca50 341 PRINTS PR00471 Acetate kinase family signature 177 198 1.5E-37 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SMGD1_RS02845 81fa76af4b7530a975a08a2b8aa9ca50 341 PRINTS PR00471 Acetate kinase family signature 292 308 1.5E-37 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SMGD1_RS02845 81fa76af4b7530a975a08a2b8aa9ca50 341 PRINTS PR00471 Acetate kinase family signature 147 160 1.5E-37 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SMGD1_RS02845 81fa76af4b7530a975a08a2b8aa9ca50 341 PRINTS PR00471 Acetate kinase family signature 3 14 1.5E-37 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SMGD1_RS02845 81fa76af4b7530a975a08a2b8aa9ca50 341 Gene3D G3DSA:3.30.420.40 3 178 1.6E-12 T 22-04-2016 SMGD1_RS07695 cb92480aa1b8098c9bd53d305f65988b 228 PANTHER PTHR11102 9 225 1.0E-52 T 22-04-2016 SMGD1_RS07695 cb92480aa1b8098c9bd53d305f65988b 228 SUPERFAMILY SSF81901 121 214 1.15E-21 T 22-04-2016 SMGD1_RS07695 cb92480aa1b8098c9bd53d305f65988b 228 SUPERFAMILY SSF81901 3 148 7.67E-33 T 22-04-2016 SMGD1_RS07695 cb92480aa1b8098c9bd53d305f65988b 228 SMART SM00671 103 138 2.3E-7 T 22-04-2016 IPR006597 Sel1-like repeat SMGD1_RS07695 cb92480aa1b8098c9bd53d305f65988b 228 SMART SM00671 30 65 3.0E-10 T 22-04-2016 IPR006597 Sel1-like repeat SMGD1_RS07695 cb92480aa1b8098c9bd53d305f65988b 228 SMART SM00671 175 210 2.8E-7 T 22-04-2016 IPR006597 Sel1-like repeat SMGD1_RS07695 cb92480aa1b8098c9bd53d305f65988b 228 SMART SM00671 66 102 0.026 T 22-04-2016 IPR006597 Sel1-like repeat SMGD1_RS07695 cb92480aa1b8098c9bd53d305f65988b 228 SMART SM00671 139 174 0.0086 T 22-04-2016 IPR006597 Sel1-like repeat SMGD1_RS07695 cb92480aa1b8098c9bd53d305f65988b 228 Pfam PF08238 Sel1 repeat 66 94 0.0042 T 22-04-2016 IPR006597 Sel1-like repeat SMGD1_RS07695 cb92480aa1b8098c9bd53d305f65988b 228 Pfam PF08238 Sel1 repeat 103 138 2.5E-7 T 22-04-2016 IPR006597 Sel1-like repeat SMGD1_RS07695 cb92480aa1b8098c9bd53d305f65988b 228 Pfam PF08238 Sel1 repeat 30 65 6.6E-8 T 22-04-2016 IPR006597 Sel1-like repeat SMGD1_RS07695 cb92480aa1b8098c9bd53d305f65988b 228 Pfam PF08238 Sel1 repeat 13 26 190.0 T 22-04-2016 IPR006597 Sel1-like repeat SMGD1_RS07695 cb92480aa1b8098c9bd53d305f65988b 228 Pfam PF08238 Sel1 repeat 175 210 9.6E-6 T 22-04-2016 IPR006597 Sel1-like repeat SMGD1_RS07695 cb92480aa1b8098c9bd53d305f65988b 228 Pfam PF08238 Sel1 repeat 144 173 3.9E-4 T 22-04-2016 IPR006597 Sel1-like repeat SMGD1_RS07695 cb92480aa1b8098c9bd53d305f65988b 228 Gene3D G3DSA:1.25.40.10 2 214 6.1E-57 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS03235 851259e5322afcd0e8c51fa6e8421bb2 334 PANTHER PTHR16254 1 261 2.2E-51 T 22-04-2016 SMGD1_RS03235 851259e5322afcd0e8c51fa6e8421bb2 334 Gene3D G3DSA:3.30.70.1450 249 325 6.2E-10 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SMGD1_RS03235 851259e5322afcd0e8c51fa6e8421bb2 334 PANTHER PTHR16254:SF21 1 261 2.2E-51 T 22-04-2016 SMGD1_RS03235 851259e5322afcd0e8c51fa6e8421bb2 334 SUPERFAMILY SSF81324 2 115 8.11E-19 T 22-04-2016 SMGD1_RS03235 851259e5322afcd0e8c51fa6e8421bb2 334 Pfam PF02080 TrkA-C domain 252 322 2.6E-8 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SMGD1_RS03235 851259e5322afcd0e8c51fa6e8421bb2 334 Gene3D G3DSA:3.40.50.720 91 239 3.2E-23 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS03235 851259e5322afcd0e8c51fa6e8421bb2 334 Pfam PF02254 TrkA-N domain 95 217 3.0E-19 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 SMGD1_RS03235 851259e5322afcd0e8c51fa6e8421bb2 334 Gene3D G3DSA:1.10.287.70 3 70 6.8E-14 T 22-04-2016 SMGD1_RS03235 851259e5322afcd0e8c51fa6e8421bb2 334 SUPERFAMILY SSF51735 91 239 3.35E-20 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS03235 851259e5322afcd0e8c51fa6e8421bb2 334 Pfam PF07885 Ion channel 2 67 1.3E-13 T 22-04-2016 IPR013099 Potassium channel domain SMGD1_RS03235 851259e5322afcd0e8c51fa6e8421bb2 334 SUPERFAMILY SSF116726 239 321 1.96E-10 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SMGD1_RS08620 a77b1e7478db2206c566a9e956d84314 207 Gene3D G3DSA:3.40.630.30 1 186 1.7E-9 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMGD1_RS08620 a77b1e7478db2206c566a9e956d84314 207 SUPERFAMILY SSF55729 3 82 1.93E-8 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMGD1_RS08620 a77b1e7478db2206c566a9e956d84314 207 SUPERFAMILY SSF55729 118 188 1.93E-8 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMGD1_RS14405 513052985d73a74d61eba4168e207d14 725 SUPERFAMILY SSF52540 482 715 4.87E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS14405 513052985d73a74d61eba4168e207d14 725 PANTHER PTHR24221 146 719 1.9E-219 T 22-04-2016 SMGD1_RS14405 513052985d73a74d61eba4168e207d14 725 PANTHER PTHR24221 30 82 1.9E-219 T 22-04-2016 SMGD1_RS14405 513052985d73a74d61eba4168e207d14 725 Pfam PF00664 ABC transporter transmembrane region 180 444 2.0E-20 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SMGD1_RS14405 513052985d73a74d61eba4168e207d14 725 Gene3D G3DSA:3.40.50.300 490 716 3.1E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS14405 513052985d73a74d61eba4168e207d14 725 Pfam PF00005 ABC transporter 508 657 2.0E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMGD1_RS14405 513052985d73a74d61eba4168e207d14 725 SUPERFAMILY SSF90123 161 476 2.35E-49 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SMGD1_RS14405 513052985d73a74d61eba4168e207d14 725 Gene3D G3DSA:1.20.1560.10 164 470 4.1E-50 T 22-04-2016 SMGD1_RS14405 513052985d73a74d61eba4168e207d14 725 SMART SM00382 517 703 6.8E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain SMGD1_RS14405 513052985d73a74d61eba4168e207d14 725 TIGRFAM TIGR03375 type_I_sec_LssB: type I secretion system ATPase 10 719 5.5E-263 T 22-04-2016 IPR017750 ATPase, type I secretion system SMGD1_RS14405 513052985d73a74d61eba4168e207d14 725 PANTHER PTHR24221:SF248 146 719 1.9E-219 T 22-04-2016 SMGD1_RS14405 513052985d73a74d61eba4168e207d14 725 PANTHER PTHR24221:SF248 30 82 1.9E-219 T 22-04-2016 SMGD1_RS14405 513052985d73a74d61eba4168e207d14 725 Gene3D G3DSA:3.90.70.10 7 147 1.3E-35 T 22-04-2016 SMGD1_RS08255 775b5fd51b5e0cc4f090cac1cc8b44de 290 Pfam PF08338 Domain of unknown function (DUF1731) 242 288 1.2E-17 T 22-04-2016 IPR013549 Domain of unknown function DUF1731 SMGD1_RS08255 775b5fd51b5e0cc4f090cac1cc8b44de 290 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 9 285 8.5E-89 T 22-04-2016 IPR010099 Epimerase family protein SDR39U1 SMGD1_RS08255 775b5fd51b5e0cc4f090cac1cc8b44de 290 PANTHER PTHR11092 1 290 2.4E-108 T 22-04-2016 IPR010099 Epimerase family protein SDR39U1 SMGD1_RS08255 775b5fd51b5e0cc4f090cac1cc8b44de 290 Gene3D G3DSA:3.40.50.720 8 190 1.5E-13 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS08255 775b5fd51b5e0cc4f090cac1cc8b44de 290 SUPERFAMILY SSF51735 7 289 2.1E-31 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS08255 775b5fd51b5e0cc4f090cac1cc8b44de 290 Pfam PF01370 NAD dependent epimerase/dehydratase family 9 208 3.2E-12 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 SMGD1_RS08255 775b5fd51b5e0cc4f090cac1cc8b44de 290 PANTHER PTHR11092:SF0 1 290 2.4E-108 T 22-04-2016 SMGD1_RS08255 775b5fd51b5e0cc4f090cac1cc8b44de 290 Gene3D G3DSA:3.90.25.10 191 237 1.1E-5 T 22-04-2016 SMGD1_RS09690 527795a68fe55f52a78ace564b50d5c0 279 PANTHER PTHR22572:SF14 10 279 2.9E-95 T 22-04-2016 SMGD1_RS09690 527795a68fe55f52a78ace564b50d5c0 279 PANTHER PTHR22572 10 279 2.9E-95 T 22-04-2016 SMGD1_RS09690 527795a68fe55f52a78ace564b50d5c0 279 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 8 270 4.1E-120 T 22-04-2016 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343 SMGD1_RS09690 527795a68fe55f52a78ace564b50d5c0 279 Gene3D G3DSA:3.90.550.10 9 277 4.3E-65 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMGD1_RS09690 527795a68fe55f52a78ace564b50d5c0 279 SUPERFAMILY SSF53448 5 276 7.21E-62 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMGD1_RS09690 527795a68fe55f52a78ace564b50d5c0 279 Pfam PF00483 Nucleotidyl transferase 15 272 1.3E-28 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 SMGD1_RS08915 68f2750e677f56bf39720b669a6cd67d 424 Gene3D G3DSA:3.30.565.10 296 410 1.6E-6 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS08915 68f2750e677f56bf39720b669a6cd67d 424 SUPERFAMILY SSF47384 221 272 1.33E-5 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS08915 68f2750e677f56bf39720b669a6cd67d 424 SUPERFAMILY SSF55874 293 413 3.01E-10 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS08915 68f2750e677f56bf39720b669a6cd67d 424 Gene3D G3DSA:1.10.287.130 221 278 2.6E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS00135 b7d926c9698841d75decd9d1b0e614eb 113 SMART SM00448 1 104 0.0091 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS00135 b7d926c9698841d75decd9d1b0e614eb 113 SUPERFAMILY SSF52172 2 104 1.41E-18 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS00135 b7d926c9698841d75decd9d1b0e614eb 113 Pfam PF00072 Response regulator receiver domain 2 101 4.8E-16 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS00135 b7d926c9698841d75decd9d1b0e614eb 113 Gene3D G3DSA:3.40.50.2300 2 102 7.1E-19 T 22-04-2016 SMGD1_RS00135 b7d926c9698841d75decd9d1b0e614eb 113 PANTHER PTHR26402 1 96 3.5E-14 T 22-04-2016 SMGD1_RS01080 01ab1a30ec44ee3353cba0842a288ba0 562 Gene3D G3DSA:3.30.565.10 406 553 3.8E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS01080 01ab1a30ec44ee3353cba0842a288ba0 562 SUPERFAMILY SSF47384 329 399 6.67E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS01080 01ab1a30ec44ee3353cba0842a288ba0 562 Pfam PF00072 Response regulator receiver domain 43 140 6.4E-10 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS01080 01ab1a30ec44ee3353cba0842a288ba0 562 SMART SM00448 5 140 0.0055 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS01080 01ab1a30ec44ee3353cba0842a288ba0 562 SMART SM00387 444 556 4.9E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS01080 01ab1a30ec44ee3353cba0842a288ba0 562 Gene3D G3DSA:1.10.287.130 330 398 7.2E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS01080 01ab1a30ec44ee3353cba0842a288ba0 562 PANTHER PTHR24423 332 562 7.9E-54 T 22-04-2016 SMGD1_RS01080 01ab1a30ec44ee3353cba0842a288ba0 562 PANTHER PTHR24423 144 290 7.9E-54 T 22-04-2016 SMGD1_RS01080 01ab1a30ec44ee3353cba0842a288ba0 562 SMART SM00091 156 224 0.0058 T 22-04-2016 IPR000014 PAS domain SMGD1_RS01080 01ab1a30ec44ee3353cba0842a288ba0 562 SUPERFAMILY SSF55785 163 275 1.22E-25 T 22-04-2016 IPR000014 PAS domain SMGD1_RS01080 01ab1a30ec44ee3353cba0842a288ba0 562 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 162 280 3.2E-19 T 22-04-2016 IPR000014 PAS domain SMGD1_RS01080 01ab1a30ec44ee3353cba0842a288ba0 562 SUPERFAMILY SSF52172 3 188 6.97E-16 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS01080 01ab1a30ec44ee3353cba0842a288ba0 562 Gene3D G3DSA:3.40.50.2300 2 149 4.6E-23 T 22-04-2016 SMGD1_RS01080 01ab1a30ec44ee3353cba0842a288ba0 562 SUPERFAMILY SSF55874 404 554 8.12E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS01080 01ab1a30ec44ee3353cba0842a288ba0 562 Gene3D G3DSA:3.30.450.20 150 290 1.0E-31 T 22-04-2016 SMGD1_RS01080 01ab1a30ec44ee3353cba0842a288ba0 562 PRINTS PR00344 Bacterial sensor protein C-terminal signature 540 553 1.0E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS01080 01ab1a30ec44ee3353cba0842a288ba0 562 PRINTS PR00344 Bacterial sensor protein C-terminal signature 516 534 1.0E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS01080 01ab1a30ec44ee3353cba0842a288ba0 562 PRINTS PR00344 Bacterial sensor protein C-terminal signature 503 513 1.0E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS01080 01ab1a30ec44ee3353cba0842a288ba0 562 PRINTS PR00344 Bacterial sensor protein C-terminal signature 485 499 1.0E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS01080 01ab1a30ec44ee3353cba0842a288ba0 562 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 447 554 6.0E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS01080 01ab1a30ec44ee3353cba0842a288ba0 562 SMART SM00086 231 273 1.3E-8 T 22-04-2016 IPR001610 PAC motif SMGD1_RS01080 01ab1a30ec44ee3353cba0842a288ba0 562 SMART SM00388 334 404 0.0012 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS01080 01ab1a30ec44ee3353cba0842a288ba0 562 Pfam PF08447 PAS fold 179 267 1.6E-24 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 SMGD1_RS01785 027c8edd57e48a1032764b971fbabe1b 240 PRINTS PR01008 Flagellar L-ring protein signature 180 196 6.2E-14 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 SMGD1_RS01785 027c8edd57e48a1032764b971fbabe1b 240 PRINTS PR01008 Flagellar L-ring protein signature 72 84 6.2E-14 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 SMGD1_RS01785 027c8edd57e48a1032764b971fbabe1b 240 PRINTS PR01008 Flagellar L-ring protein signature 201 215 6.2E-14 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 SMGD1_RS01785 027c8edd57e48a1032764b971fbabe1b 240 PRINTS PR01008 Flagellar L-ring protein signature 154 169 6.2E-14 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 SMGD1_RS01785 027c8edd57e48a1032764b971fbabe1b 240 PRINTS PR01008 Flagellar L-ring protein signature 217 231 6.2E-14 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 SMGD1_RS01785 027c8edd57e48a1032764b971fbabe1b 240 PANTHER PTHR34933 1 240 2.2E-32 T 22-04-2016 SMGD1_RS01785 027c8edd57e48a1032764b971fbabe1b 240 Pfam PF02107 Flagellar L-ring protein 53 239 1.1E-46 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 SMGD1_RS01785 027c8edd57e48a1032764b971fbabe1b 240 Hamap MF_00415 Flagellar L-ring protein [flgH]. 1 238 23.514 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 SMGD1_RS13150 18805799a9f2a7d4bfe583e28bfc01b8 565 SUPERFAMILY SSF52518 2 183 1.39E-64 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SMGD1_RS13150 18805799a9f2a7d4bfe583e28bfc01b8 565 Gene3D G3DSA:3.40.50.970 358 562 2.4E-76 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SMGD1_RS13150 18805799a9f2a7d4bfe583e28bfc01b8 565 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 387 535 2.1E-52 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 SMGD1_RS13150 18805799a9f2a7d4bfe583e28bfc01b8 565 PANTHER PTHR18968 1 564 2.2E-300 T 22-04-2016 SMGD1_RS13150 18805799a9f2a7d4bfe583e28bfc01b8 565 SUPERFAMILY SSF52467 186 355 3.27E-59 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain SMGD1_RS13150 18805799a9f2a7d4bfe583e28bfc01b8 565 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 4 558 4.3E-241 T 22-04-2016 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SMGD1_RS13150 18805799a9f2a7d4bfe583e28bfc01b8 565 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 424 443 - T 22-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 SMGD1_RS13150 18805799a9f2a7d4bfe583e28bfc01b8 565 Gene3D G3DSA:3.40.50.970 2 177 2.7E-74 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SMGD1_RS13150 18805799a9f2a7d4bfe583e28bfc01b8 565 SUPERFAMILY SSF52518 363 560 3.14E-69 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SMGD1_RS13150 18805799a9f2a7d4bfe583e28bfc01b8 565 Gene3D G3DSA:3.40.50.1220 186 357 5.7E-61 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain SMGD1_RS13150 18805799a9f2a7d4bfe583e28bfc01b8 565 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 193 327 4.4E-45 T 22-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 SMGD1_RS13150 18805799a9f2a7d4bfe583e28bfc01b8 565 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 167 1.8E-58 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 SMGD1_RS13150 18805799a9f2a7d4bfe583e28bfc01b8 565 PANTHER PTHR18968:SF116 1 564 2.2E-300 T 22-04-2016 SMGD1_RS04445 ffe9ade315d5cc2b6a90b027dd5f095c 125 Gene3D G3DSA:2.40.50.140 1 123 1.8E-63 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMGD1_RS04445 ffe9ade315d5cc2b6a90b027dd5f095c 125 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS04445 ffe9ade315d5cc2b6a90b027dd5f095c 125 Pfam PF00164 Ribosomal protein S12/S23 9 123 3.8E-41 T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS04445 ffe9ade315d5cc2b6a90b027dd5f095c 125 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 123 6.8E-69 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 SMGD1_RS04445 ffe9ade315d5cc2b6a90b027dd5f095c 125 PIRSF PIRSF002133 1 124 1.8E-53 T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS04445 ffe9ade315d5cc2b6a90b027dd5f095c 125 SUPERFAMILY SSF50249 2 123 4.03E-50 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMGD1_RS04445 ffe9ade315d5cc2b6a90b027dd5f095c 125 PRINTS PR01034 Ribosomal protein S12 signature 27 42 2.6E-58 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 SMGD1_RS04445 ffe9ade315d5cc2b6a90b027dd5f095c 125 PRINTS PR01034 Ribosomal protein S12 signature 94 110 2.6E-58 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 SMGD1_RS04445 ffe9ade315d5cc2b6a90b027dd5f095c 125 PRINTS PR01034 Ribosomal protein S12 signature 42 57 2.6E-58 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 SMGD1_RS04445 ffe9ade315d5cc2b6a90b027dd5f095c 125 PRINTS PR01034 Ribosomal protein S12 signature 77 94 2.6E-58 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 SMGD1_RS04445 ffe9ade315d5cc2b6a90b027dd5f095c 125 PRINTS PR01034 Ribosomal protein S12 signature 110 122 2.6E-58 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 SMGD1_RS04445 ffe9ade315d5cc2b6a90b027dd5f095c 125 PRINTS PR01034 Ribosomal protein S12 signature 58 77 2.6E-58 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 SMGD1_RS04445 ffe9ade315d5cc2b6a90b027dd5f095c 125 PANTHER PTHR11652 1 116 2.2E-70 T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS04445 ffe9ade315d5cc2b6a90b027dd5f095c 125 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.839 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 SMGD1_RS02465 0127229e128e747ad00b47f5db54a134 241 PANTHER PTHR11055 75 240 1.1E-40 T 22-04-2016 SMGD1_RS02465 0127229e128e747ad00b47f5db54a134 241 Gene3D G3DSA:3.40.50.300 54 238 1.8E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS02465 0127229e128e747ad00b47f5db54a134 241 PANTHER PTHR11055:SF15 75 240 1.1E-40 T 22-04-2016 SMGD1_RS02465 0127229e128e747ad00b47f5db54a134 241 Pfam PF09834 Predicted membrane protein (DUF2061) 11 60 3.8E-15 T 22-04-2016 IPR018638 Domain of unknown function DUF2061, membrane SMGD1_RS02465 0127229e128e747ad00b47f5db54a134 241 SUPERFAMILY SSF52540 71 237 1.95E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS02465 0127229e128e747ad00b47f5db54a134 241 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 59 234 6.1E-49 T 22-04-2016 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: REACT_13433|UniPathway: UPA00140 SMGD1_RS02465 0127229e128e747ad00b47f5db54a134 241 Pfam PF01583 Adenylylsulphate kinase 72 222 1.2E-44 T 22-04-2016 SMGD1_RS07490 cc33a01800cc68124466f4d5756a4ef1 602 PANTHER PTHR11451 2 599 7.8E-252 T 22-04-2016 SMGD1_RS07490 cc33a01800cc68124466f4d5756a4ef1 602 Gene3D G3DSA:3.40.50.800 497 600 1.1E-26 T 22-04-2016 IPR004154 Anticodon-binding SMGD1_RS07490 cc33a01800cc68124466f4d5756a4ef1 602 PRINTS PR01047 Threonyl-tRNA synthetase signature 472 485 7.4E-50 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 SMGD1_RS07490 cc33a01800cc68124466f4d5756a4ef1 602 PRINTS PR01047 Threonyl-tRNA synthetase signature 499 511 7.4E-50 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 SMGD1_RS07490 cc33a01800cc68124466f4d5756a4ef1 602 PRINTS PR01047 Threonyl-tRNA synthetase signature 328 351 7.4E-50 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 SMGD1_RS07490 cc33a01800cc68124466f4d5756a4ef1 602 PRINTS PR01047 Threonyl-tRNA synthetase signature 429 457 7.4E-50 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 SMGD1_RS07490 cc33a01800cc68124466f4d5756a4ef1 602 PRINTS PR01047 Threonyl-tRNA synthetase signature 295 323 7.4E-50 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 SMGD1_RS07490 cc33a01800cc68124466f4d5756a4ef1 602 SUPERFAMILY SSF55681 208 490 8.42E-93 T 22-04-2016 SMGD1_RS07490 cc33a01800cc68124466f4d5756a4ef1 602 Pfam PF03129 Anticodon binding domain 506 595 2.3E-20 T 22-04-2016 IPR004154 Anticodon-binding SMGD1_RS07490 cc33a01800cc68124466f4d5756a4ef1 602 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 35 599 32.426 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 SMGD1_RS07490 cc33a01800cc68124466f4d5756a4ef1 602 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 41 596 1.1E-216 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 SMGD1_RS07490 cc33a01800cc68124466f4d5756a4ef1 602 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 290 494 1.2E-39 T 22-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMGD1_RS07490 cc33a01800cc68124466f4d5756a4ef1 602 Gene3D G3DSA:3.30.930.10 207 495 9.0E-120 T 22-04-2016 SMGD1_RS07490 cc33a01800cc68124466f4d5756a4ef1 602 SUPERFAMILY SSF52954 492 599 1.04E-27 T 22-04-2016 IPR004154 Anticodon-binding SMGD1_RS07490 cc33a01800cc68124466f4d5756a4ef1 602 Gene3D G3DSA:3.30.54.20 99 152 2.2E-16 T 22-04-2016 SMGD1_RS07490 cc33a01800cc68124466f4d5756a4ef1 602 Gene3D G3DSA:3.30.980.10 153 189 5.5E-32 T 22-04-2016 SMGD1_RS07490 cc33a01800cc68124466f4d5756a4ef1 602 Gene3D G3DSA:3.30.980.10 35 98 5.5E-32 T 22-04-2016 SMGD1_RS07490 cc33a01800cc68124466f4d5756a4ef1 602 PANTHER PTHR11451:SF31 2 599 7.8E-252 T 22-04-2016 SMGD1_RS07490 cc33a01800cc68124466f4d5756a4ef1 602 SUPERFAMILY SSF55186 33 206 3.92E-54 T 22-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 SMGD1_RS07490 cc33a01800cc68124466f4d5756a4ef1 602 SMART SM00863 135 184 1.5E-21 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 SMGD1_RS07490 cc33a01800cc68124466f4d5756a4ef1 602 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 135 184 5.5E-14 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 SMGD1_RS01715 6b7419db04ab64cb48d1b7030f68cb2a 271 Pfam PF12838 4Fe-4S dicluster domain 149 202 2.4E-6 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SMGD1_RS01715 6b7419db04ab64cb48d1b7030f68cb2a 271 Pfam PF12838 4Fe-4S dicluster domain 59 112 8.7E-8 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SMGD1_RS01715 6b7419db04ab64cb48d1b7030f68cb2a 271 PANTHER PTHR30176 9 233 9.4E-57 T 22-04-2016 SMGD1_RS01715 6b7419db04ab64cb48d1b7030f68cb2a 271 SUPERFAMILY SSF54862 53 201 4.19E-19 T 22-04-2016 SMGD1_RS01715 6b7419db04ab64cb48d1b7030f68cb2a 271 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 59 70 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SMGD1_RS01715 6b7419db04ab64cb48d1b7030f68cb2a 271 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 189 200 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SMGD1_RS01715 6b7419db04ab64cb48d1b7030f68cb2a 271 Gene3D G3DSA:3.30.70.20 151 206 1.3E-10 T 22-04-2016 SMGD1_RS01715 6b7419db04ab64cb48d1b7030f68cb2a 271 Gene3D G3DSA:3.30.70.20 58 105 2.2E-10 T 22-04-2016 SMGD1_RS01715 6b7419db04ab64cb48d1b7030f68cb2a 271 Gene3D G3DSA:3.30.70.20 106 150 6.0E-7 T 22-04-2016 SMGD1_RS01715 6b7419db04ab64cb48d1b7030f68cb2a 271 TIGRFAM TIGR00397 mauM_napG: MauM/NapG family ferredoxin-type protein 7 220 4.8E-59 T 22-04-2016 IPR004494 MauM/NapG ferredoxin-type protein SMGD1_RS01715 6b7419db04ab64cb48d1b7030f68cb2a 271 PANTHER PTHR30176:SF3 9 233 9.4E-57 T 22-04-2016 SMGD1_RS13320 ef4fbd71a713be35d87c82b4eda80395 290 SUPERFAMILY SSF52210 123 287 2.88E-49 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 SMGD1_RS13320 ef4fbd71a713be35d87c82b4eda80395 290 Pfam PF00549 CoA-ligase 151 271 6.8E-13 T 22-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 SMGD1_RS13320 ef4fbd71a713be35d87c82b4eda80395 290 Gene3D G3DSA:3.40.50.720 2 119 7.5E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS13320 ef4fbd71a713be35d87c82b4eda80395 290 SMART SM00881 4 100 9.6E-35 T 22-04-2016 IPR003781 CoA-binding GO:0048037 SMGD1_RS13320 ef4fbd71a713be35d87c82b4eda80395 290 SUPERFAMILY SSF51735 1 122 2.76E-40 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS13320 ef4fbd71a713be35d87c82b4eda80395 290 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 SMGD1_RS13320 ef4fbd71a713be35d87c82b4eda80395 290 Pfam PF02629 CoA binding domain 6 99 1.3E-29 T 22-04-2016 IPR003781 CoA-binding GO:0048037 SMGD1_RS13320 ef4fbd71a713be35d87c82b4eda80395 290 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 1.5E-29 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 SMGD1_RS13320 ef4fbd71a713be35d87c82b4eda80395 290 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 1.5E-29 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 SMGD1_RS13320 ef4fbd71a713be35d87c82b4eda80395 290 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 1.5E-29 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 SMGD1_RS13320 ef4fbd71a713be35d87c82b4eda80395 290 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 1.5E-29 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 SMGD1_RS13320 ef4fbd71a713be35d87c82b4eda80395 290 PANTHER PTHR11117 1 290 1.8E-158 T 22-04-2016 SMGD1_RS13320 ef4fbd71a713be35d87c82b4eda80395 290 PIRSF PIRSF001553 1 290 5.6E-124 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 SMGD1_RS13320 ef4fbd71a713be35d87c82b4eda80395 290 Gene3D G3DSA:3.40.50.261 120 287 4.2E-65 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 SMGD1_RS13320 ef4fbd71a713be35d87c82b4eda80395 290 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 3 288 4.8E-127 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 SMGD1_RS13320 ef4fbd71a713be35d87c82b4eda80395 290 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 22-04-2016 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site SMGD1_RS11800 d335a6fad08ffc9d85ab04fbe86592fa 432 SUPERFAMILY SSF53383 9 431 1.18E-119 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SMGD1_RS11800 d335a6fad08ffc9d85ab04fbe86592fa 432 PIRSF PIRSF000521 16 432 6.8E-30 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SMGD1_RS11800 d335a6fad08ffc9d85ab04fbe86592fa 432 Gene3D G3DSA:3.40.640.10 65 333 1.8E-85 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SMGD1_RS11800 d335a6fad08ffc9d85ab04fbe86592fa 432 Pfam PF00202 Aminotransferase class-III 28 428 2.4E-121 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SMGD1_RS11800 d335a6fad08ffc9d85ab04fbe86592fa 432 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 2 432 47.204 T 22-04-2016 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62|UniPathway: UPA00078 SMGD1_RS11800 d335a6fad08ffc9d85ab04fbe86592fa 432 PANTHER PTHR11986 1 432 7.6E-193 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SMGD1_RS11800 d335a6fad08ffc9d85ab04fbe86592fa 432 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 244 281 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SMGD1_RS11800 d335a6fad08ffc9d85ab04fbe86592fa 432 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 14 429 1.6E-168 T 22-04-2016 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62|UniPathway: UPA00078 SMGD1_RS11800 d335a6fad08ffc9d85ab04fbe86592fa 432 PANTHER PTHR11986:SF8 1 432 7.6E-193 T 22-04-2016 SMGD1_RS11800 d335a6fad08ffc9d85ab04fbe86592fa 432 Gene3D G3DSA:3.90.1150.10 4 64 8.2E-52 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SMGD1_RS11800 d335a6fad08ffc9d85ab04fbe86592fa 432 Gene3D G3DSA:3.90.1150.10 336 431 8.2E-52 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SMGD1_RS02230 9abb9a99e62237de261b2be68903308a 345 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 303 329 2.0E-61 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 SMGD1_RS02230 9abb9a99e62237de261b2be68903308a 345 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 52 70 2.0E-61 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 SMGD1_RS02230 9abb9a99e62237de261b2be68903308a 345 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 72 95 2.0E-61 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 SMGD1_RS02230 9abb9a99e62237de261b2be68903308a 345 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 135 154 2.0E-61 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 SMGD1_RS02230 9abb9a99e62237de261b2be68903308a 345 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 190 210 2.0E-61 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 SMGD1_RS02230 9abb9a99e62237de261b2be68903308a 345 Gene3D G3DSA:3.90.640.10 190 262 3.5E-28 T 22-04-2016 SMGD1_RS02230 9abb9a99e62237de261b2be68903308a 345 PANTHER PTHR19375:SF117 10 329 4.4E-156 T 22-04-2016 SMGD1_RS02230 9abb9a99e62237de261b2be68903308a 345 PANTHER PTHR19375 10 329 4.4E-156 T 22-04-2016 SMGD1_RS02230 9abb9a99e62237de261b2be68903308a 345 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 10 339 6.0E-149 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 SMGD1_RS02230 9abb9a99e62237de261b2be68903308a 345 Gene3D G3DSA:3.30.420.40 266 320 3.9E-31 T 22-04-2016 SMGD1_RS02230 9abb9a99e62237de261b2be68903308a 345 Gene3D G3DSA:3.30.420.40 163 189 3.9E-31 T 22-04-2016 SMGD1_RS02230 9abb9a99e62237de261b2be68903308a 345 SUPERFAMILY SSF53067 153 335 1.19E-47 T 22-04-2016 SMGD1_RS02230 9abb9a99e62237de261b2be68903308a 345 Gene3D G3DSA:3.30.420.40 11 162 1.1E-45 T 22-04-2016 SMGD1_RS02230 9abb9a99e62237de261b2be68903308a 345 Pfam PF06723 MreB/Mbl protein 12 339 9.8E-142 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 SMGD1_RS02230 9abb9a99e62237de261b2be68903308a 345 SUPERFAMILY SSF53067 10 151 9.89E-38 T 22-04-2016 SMGD1_RS08755 7d91d6812ab5684df49c0992e7356409 385 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 116 126 - T 22-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SMGD1_RS08755 7d91d6812ab5684df49c0992e7356409 385 SUPERFAMILY SSF55973 4 110 1.49E-43 T 22-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SMGD1_RS08755 7d91d6812ab5684df49c0992e7356409 385 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 3 383 56.175 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SMGD1_RS08755 7d91d6812ab5684df49c0992e7356409 385 PANTHER PTHR11964 5 381 2.2E-238 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SMGD1_RS08755 7d91d6812ab5684df49c0992e7356409 385 Gene3D G3DSA:3.30.300.10 244 383 3.4E-68 T 22-04-2016 SMGD1_RS08755 7d91d6812ab5684df49c0992e7356409 385 SUPERFAMILY SSF55973 110 232 9.42E-51 T 22-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SMGD1_RS08755 7d91d6812ab5684df49c0992e7356409 385 SUPERFAMILY SSF55973 233 384 3.92E-68 T 22-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SMGD1_RS08755 7d91d6812ab5684df49c0992e7356409 385 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 259 267 - T 22-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SMGD1_RS08755 7d91d6812ab5684df49c0992e7356409 385 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 6 382 3.9E-183 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SMGD1_RS08755 7d91d6812ab5684df49c0992e7356409 385 Gene3D G3DSA:3.30.300.10 12 132 1.0E-42 T 22-04-2016 SMGD1_RS08755 7d91d6812ab5684df49c0992e7356409 385 Pfam PF02772 S-adenosylmethionine synthetase, central domain 114 231 5.7E-46 T 22-04-2016 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SMGD1_RS08755 7d91d6812ab5684df49c0992e7356409 385 Gene3D G3DSA:3.30.300.10 133 233 8.5E-44 T 22-04-2016 SMGD1_RS08755 7d91d6812ab5684df49c0992e7356409 385 PIRSF PIRSF000497 1 384 4.9E-170 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SMGD1_RS08755 7d91d6812ab5684df49c0992e7356409 385 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 5 102 2.3E-39 T 22-04-2016 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SMGD1_RS08755 7d91d6812ab5684df49c0992e7356409 385 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 233 372 5.0E-68 T 22-04-2016 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SMGD1_RS09970 bd4c6dba1d2051fb89d07c869a3e198c 376 Pfam PF02661 Fic/DOC family 117 224 2.1E-15 T 22-04-2016 IPR003812 Fido domain SMGD1_RS09970 bd4c6dba1d2051fb89d07c869a3e198c 376 SUPERFAMILY SSF140931 106 300 1.7E-29 T 22-04-2016 IPR003812 Fido domain SMGD1_RS09970 bd4c6dba1d2051fb89d07c869a3e198c 376 PANTHER PTHR13504:SF33 6 376 2.3E-87 T 22-04-2016 SMGD1_RS09970 bd4c6dba1d2051fb89d07c869a3e198c 376 PANTHER PTHR13504 6 376 2.3E-87 T 22-04-2016 SMGD1_RS09970 bd4c6dba1d2051fb89d07c869a3e198c 376 Gene3D G3DSA:1.10.3290.10 27 301 3.3E-49 T 22-04-2016 IPR003812 Fido domain SMGD1_RS09970 bd4c6dba1d2051fb89d07c869a3e198c 376 Pfam PF13776 Domain of unknown function (DUF4172) 7 87 9.7E-24 T 22-04-2016 IPR025230 Domain of unknown function DUF4172 SMGD1_RS11320 47e7626b8170244162bccf2513c157db 332 SUPERFAMILY SSF56042 152 327 1.03E-38 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SMGD1_RS11320 47e7626b8170244162bccf2513c157db 332 Gene3D G3DSA:3.30.1330.10 16 148 2.6E-23 T 22-04-2016 IPR016188 PurM-like, N-terminal domain SMGD1_RS11320 47e7626b8170244162bccf2513c157db 332 SUPERFAMILY SSF55326 4 149 5.41E-31 T 22-04-2016 SMGD1_RS11320 47e7626b8170244162bccf2513c157db 332 Pfam PF00586 AIR synthase related protein, N-terminal domain 37 147 3.0E-17 T 22-04-2016 IPR016188 PurM-like, N-terminal domain SMGD1_RS11320 47e7626b8170244162bccf2513c157db 332 TIGRFAM TIGR02124 hypE: hydrogenase expression/formation protein HypE 5 332 6.7E-134 T 22-04-2016 IPR011854 Hydrogenase expression/formation protein HypE SMGD1_RS11320 47e7626b8170244162bccf2513c157db 332 Pfam PF02769 AIR synthase related protein, C-terminal domain 160 309 3.8E-21 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SMGD1_RS11320 47e7626b8170244162bccf2513c157db 332 PANTHER PTHR30303:SF0 1 332 4.9E-140 T 22-04-2016 SMGD1_RS11320 47e7626b8170244162bccf2513c157db 332 Gene3D G3DSA:3.90.650.10 157 316 5.3E-21 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SMGD1_RS11320 47e7626b8170244162bccf2513c157db 332 PIRSF PIRSF005644 1 332 3.2E-120 T 22-04-2016 IPR011854 Hydrogenase expression/formation protein HypE SMGD1_RS11320 47e7626b8170244162bccf2513c157db 332 PANTHER PTHR30303 1 332 4.9E-140 T 22-04-2016 SMGD1_RS07860 66c2582c248d5e8b2729a9e1f7427d9c 774 Pfam PF09084 NMT1/THI5 like 31 238 5.1E-41 T 22-04-2016 IPR015168 SsuA/THI5-like SMGD1_RS07860 66c2582c248d5e8b2729a9e1f7427d9c 774 Pfam PF00990 Diguanylate cyclase, GGDEF domain 610 769 9.1E-45 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS07860 66c2582c248d5e8b2729a9e1f7427d9c 774 SUPERFAMILY SSF55073 614 772 4.0E-43 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS07860 66c2582c248d5e8b2729a9e1f7427d9c 774 SUPERFAMILY SSF53850 23 304 3.26E-22 T 22-04-2016 SMGD1_RS07860 66c2582c248d5e8b2729a9e1f7427d9c 774 SMART SM00267 598 773 5.7E-53 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS07860 66c2582c248d5e8b2729a9e1f7427d9c 774 Gene3D G3DSA:3.40.190.10 334 413 4.5E-21 T 22-04-2016 SMGD1_RS07860 66c2582c248d5e8b2729a9e1f7427d9c 774 Gene3D G3DSA:3.40.190.10 518 556 4.5E-21 T 22-04-2016 SMGD1_RS07860 66c2582c248d5e8b2729a9e1f7427d9c 774 SUPERFAMILY SSF53850 338 556 7.29E-43 T 22-04-2016 SMGD1_RS07860 66c2582c248d5e8b2729a9e1f7427d9c 774 PANTHER PTHR31528 1 318 4.0E-42 T 22-04-2016 IPR027939 NMT1/THI5 family GO:0009228 UniPathway: UPA00060 SMGD1_RS07860 66c2582c248d5e8b2729a9e1f7427d9c 774 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 338 553 6.0E-31 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SMGD1_RS07860 66c2582c248d5e8b2729a9e1f7427d9c 774 Gene3D G3DSA:3.30.70.270 611 772 5.5E-47 T 22-04-2016 SMGD1_RS07860 66c2582c248d5e8b2729a9e1f7427d9c 774 Gene3D G3DSA:3.40.190.10 414 517 3.0E-9 T 22-04-2016 SMGD1_RS07860 66c2582c248d5e8b2729a9e1f7427d9c 774 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 605 773 1.7E-46 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS07860 66c2582c248d5e8b2729a9e1f7427d9c 774 SMART SM00062 337 556 2.8E-23 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SMGD1_RS08990 356b338339a9d45399bc3935598f040e 278 PANTHER PTHR30349:SF5 11 273 1.4E-57 T 22-04-2016 SMGD1_RS08990 356b338339a9d45399bc3935598f040e 278 Pfam PF00589 Phage integrase family 111 258 9.5E-33 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 SMGD1_RS08990 356b338339a9d45399bc3935598f040e 278 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 11 84 3.4E-6 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 SMGD1_RS08990 356b338339a9d45399bc3935598f040e 278 PANTHER PTHR30349 11 273 1.4E-57 T 22-04-2016 SMGD1_RS08990 356b338339a9d45399bc3935598f040e 278 Gene3D G3DSA:1.10.150.130 11 88 9.1E-9 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal SMGD1_RS08990 356b338339a9d45399bc3935598f040e 278 Gene3D G3DSA:1.10.443.10 111 265 9.3E-41 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 SMGD1_RS08990 356b338339a9d45399bc3935598f040e 278 SUPERFAMILY SSF56349 111 264 2.09E-38 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 SMGD1_RS05395 c153641a862c96f8aaf138b9a2a36f8f 172 SUPERFAMILY SSF55781 5 158 3.64E-33 T 22-04-2016 IPR029016 GAF domain-like SMGD1_RS05395 c153641a862c96f8aaf138b9a2a36f8f 172 SMART SM00065 22 165 1.1E-12 T 22-04-2016 IPR003018 GAF domain GO:0005515 SMGD1_RS05395 c153641a862c96f8aaf138b9a2a36f8f 172 Pfam PF01590 GAF domain 29 151 2.1E-12 T 22-04-2016 IPR003018 GAF domain GO:0005515 SMGD1_RS05395 c153641a862c96f8aaf138b9a2a36f8f 172 PANTHER PTHR11347 1 152 2.9E-32 T 22-04-2016 SMGD1_RS05395 c153641a862c96f8aaf138b9a2a36f8f 172 Gene3D G3DSA:3.30.450.40 7 156 1.6E-35 T 22-04-2016 IPR029016 GAF domain-like SMGD1_RS01405 c6d63310d8f79b838f280af67033740b 410 PIRSF PIRSF000151 1 410 3.0E-169 T 22-04-2016 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 SMGD1_RS01405 c6d63310d8f79b838f280af67033740b 410 PANTHER PTHR11063 1 410 4.7E-172 T 22-04-2016 SMGD1_RS01405 c6d63310d8f79b838f280af67033740b 410 Gene3D G3DSA:3.40.605.10 1 219 1.6E-97 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 SMGD1_RS01405 c6d63310d8f79b838f280af67033740b 410 Gene3D G3DSA:3.40.605.10 369 410 1.6E-97 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 SMGD1_RS01405 c6d63310d8f79b838f280af67033740b 410 Pfam PF00171 Aldehyde dehydrogenase family 2 278 5.4E-12 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 SMGD1_RS01405 c6d63310d8f79b838f280af67033740b 410 Gene3D G3DSA:3.40.309.10 222 368 2.3E-39 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 SMGD1_RS01405 c6d63310d8f79b838f280af67033740b 410 PANTHER PTHR11063:SF8 1 410 4.7E-172 T 22-04-2016 SMGD1_RS01405 c6d63310d8f79b838f280af67033740b 410 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 8 400 1.7E-143 T 22-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 SMGD1_RS01405 c6d63310d8f79b838f280af67033740b 410 SUPERFAMILY SSF53720 2 410 1.07E-104 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 SMGD1_RS01405 c6d63310d8f79b838f280af67033740b 410 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 1 410 38.121 T 22-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 SMGD1_RS01405 c6d63310d8f79b838f280af67033740b 410 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 317 339 - T 22-04-2016 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 SMGD1_RS10525 3b35f972e84b4e249fa310b194612d2a 345 PANTHER PTHR24421:SF4 2 343 1.1E-116 T 22-04-2016 SMGD1_RS10525 3b35f972e84b4e249fa310b194612d2a 345 Pfam PF01339 CheB methylesterase 160 336 1.3E-53 T 22-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 SMGD1_RS10525 3b35f972e84b4e249fa310b194612d2a 345 Gene3D G3DSA:3.40.50.180 152 343 1.2E-71 T 22-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 SMGD1_RS10525 3b35f972e84b4e249fa310b194612d2a 345 Pfam PF00072 Response regulator receiver domain 5 108 6.6E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS10525 3b35f972e84b4e249fa310b194612d2a 345 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 3 343 37.296 T 22-04-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 SMGD1_RS10525 3b35f972e84b4e249fa310b194612d2a 345 PANTHER PTHR24421 2 343 1.1E-116 T 22-04-2016 SMGD1_RS10525 3b35f972e84b4e249fa310b194612d2a 345 Gene3D G3DSA:3.40.50.2300 2 110 3.1E-29 T 22-04-2016 SMGD1_RS10525 3b35f972e84b4e249fa310b194612d2a 345 SUPERFAMILY SSF52172 3 108 6.26E-27 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS10525 3b35f972e84b4e249fa310b194612d2a 345 PIRSF PIRSF000876 1 345 3.4E-123 T 22-04-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 SMGD1_RS10525 3b35f972e84b4e249fa310b194612d2a 345 SUPERFAMILY SSF52738 155 343 4.32E-63 T 22-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 SMGD1_RS10525 3b35f972e84b4e249fa310b194612d2a 345 SMART SM00448 3 126 4.1E-21 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS13140 55341227aa94ad65d6b72cc597ca8c5f 401 SUPERFAMILY SSF53686 4 315 3.14E-98 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SMGD1_RS13140 55341227aa94ad65d6b72cc597ca8c5f 401 SUPERFAMILY SSF55021 328 393 1.03E-5 T 22-04-2016 SMGD1_RS13140 55341227aa94ad65d6b72cc597ca8c5f 401 PANTHER PTHR10314:SF17 2 356 1.6E-155 T 22-04-2016 SMGD1_RS13140 55341227aa94ad65d6b72cc597ca8c5f 401 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 317 397 1.4E-4 T 22-04-2016 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 SMGD1_RS13140 55341227aa94ad65d6b72cc597ca8c5f 401 PANTHER PTHR10314 2 356 1.6E-155 T 22-04-2016 SMGD1_RS13140 55341227aa94ad65d6b72cc597ca8c5f 401 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 42 55 - T 22-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 SMGD1_RS13140 55341227aa94ad65d6b72cc597ca8c5f 401 Gene3D G3DSA:3.40.50.1100 70 323 7.5E-77 T 22-04-2016 SMGD1_RS13140 55341227aa94ad65d6b72cc597ca8c5f 401 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 16 304 2.4E-77 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SMGD1_RS13140 55341227aa94ad65d6b72cc597ca8c5f 401 TIGRFAM TIGR01127 ilvA_1Cterm: threonine ammonia-lyase 21 397 6.7E-157 T 22-04-2016 IPR005789 Threonine dehydratase, catabolic GO:0004794|GO:0006567 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00052 SMGD1_RS13140 55341227aa94ad65d6b72cc597ca8c5f 401 Gene3D G3DSA:3.30.70.260 324 390 9.7E-5 T 22-04-2016 SMGD1_RS04390 20b527e2c0d180a38bca819163ec7c85 163 PANTHER PTHR30435:SF2 1 63 2.9E-52 T 22-04-2016 SMGD1_RS04390 20b527e2c0d180a38bca819163ec7c85 163 PANTHER PTHR30435:SF2 90 163 2.9E-52 T 22-04-2016 SMGD1_RS04390 20b527e2c0d180a38bca819163ec7c85 163 PANTHER PTHR30435 1 63 2.9E-52 T 22-04-2016 SMGD1_RS04390 20b527e2c0d180a38bca819163ec7c85 163 PANTHER PTHR30435 90 163 2.9E-52 T 22-04-2016 SMGD1_RS04390 20b527e2c0d180a38bca819163ec7c85 163 Pfam PF00460 Flagella basal body rod protein 10 34 2.4E-6 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 SMGD1_RS04390 20b527e2c0d180a38bca819163ec7c85 163 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 4 163 6.5E-54 T 22-04-2016 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 SMGD1_RS04390 20b527e2c0d180a38bca819163ec7c85 163 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 113 161 4.7E-10 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain SMGD1_RS13380 af876904845a5dc205718097fc135d40 432 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 1 424 3.2E-116 T 22-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 SMGD1_RS13380 af876904845a5dc205718097fc135d40 432 PANTHER PTHR11451:SF41 1 312 2.8E-51 T 22-04-2016 SMGD1_RS13380 af876904845a5dc205718097fc135d40 432 Gene3D G3DSA:3.90.800.10 67 177 2.1E-22 T 22-04-2016 SMGD1_RS13380 af876904845a5dc205718097fc135d40 432 Gene3D G3DSA:1.10.1160.10 231 312 4.7E-21 T 22-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 SMGD1_RS13380 af876904845a5dc205718097fc135d40 432 SUPERFAMILY SSF52374 2 295 2.81E-70 T 22-04-2016 SMGD1_RS13380 af876904845a5dc205718097fc135d40 432 SUPERFAMILY SSF48163 278 423 2.49E-17 T 22-04-2016 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 SMGD1_RS13380 af876904845a5dc205718097fc135d40 432 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 3 300 2.1E-65 T 22-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 SMGD1_RS13380 af876904845a5dc205718097fc135d40 432 Gene3D G3DSA:3.40.50.620 2 66 8.7E-31 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMGD1_RS13380 af876904845a5dc205718097fc135d40 432 Gene3D G3DSA:3.40.50.620 178 228 8.7E-31 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMGD1_RS13380 af876904845a5dc205718097fc135d40 432 PRINTS PR00987 Glutamyl-tRNA synthetase signature 3 15 2.6E-16 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 SMGD1_RS13380 af876904845a5dc205718097fc135d40 432 PRINTS PR00987 Glutamyl-tRNA synthetase signature 176 186 2.6E-16 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 SMGD1_RS13380 af876904845a5dc205718097fc135d40 432 PRINTS PR00987 Glutamyl-tRNA synthetase signature 192 200 2.6E-16 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 SMGD1_RS13380 af876904845a5dc205718097fc135d40 432 PRINTS PR00987 Glutamyl-tRNA synthetase signature 17 28 2.6E-16 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 SMGD1_RS13380 af876904845a5dc205718097fc135d40 432 PRINTS PR00987 Glutamyl-tRNA synthetase signature 32 45 2.6E-16 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 SMGD1_RS13380 af876904845a5dc205718097fc135d40 432 PANTHER PTHR11451 1 312 2.8E-51 T 22-04-2016 SMGD1_RS06605 e7304a50150d28b7109de6d61c4f9d30 341 PANTHER PTHR10799:SF750 216 337 3.5E-25 T 22-04-2016 SMGD1_RS06605 e7304a50150d28b7109de6d61c4f9d30 341 Gene3D G3DSA:3.30.70.270 184 338 7.3E-46 T 22-04-2016 SMGD1_RS06605 e7304a50150d28b7109de6d61c4f9d30 341 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 74 179 4.3E-22 T 22-04-2016 IPR000014 PAS domain SMGD1_RS06605 e7304a50150d28b7109de6d61c4f9d30 341 SUPERFAMILY SSF55785 72 172 6.93E-30 T 22-04-2016 IPR000014 PAS domain SMGD1_RS06605 e7304a50150d28b7109de6d61c4f9d30 341 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 179 338 1.6E-47 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS06605 e7304a50150d28b7109de6d61c4f9d30 341 SMART SM00086 133 175 6.6E-9 T 22-04-2016 IPR001610 PAC motif SMGD1_RS06605 e7304a50150d28b7109de6d61c4f9d30 341 PANTHER PTHR10799 216 337 3.5E-25 T 22-04-2016 SMGD1_RS06605 e7304a50150d28b7109de6d61c4f9d30 341 Pfam PF13426 PAS domain 72 174 1.2E-16 T 22-04-2016 IPR000014 PAS domain SMGD1_RS06605 e7304a50150d28b7109de6d61c4f9d30 341 SUPERFAMILY SSF55073 187 337 4.71E-43 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS06605 e7304a50150d28b7109de6d61c4f9d30 341 Pfam PF00990 Diguanylate cyclase, GGDEF domain 183 335 7.3E-41 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS06605 e7304a50150d28b7109de6d61c4f9d30 341 Gene3D G3DSA:3.30.450.20 71 174 1.5E-30 T 22-04-2016 SMGD1_RS06605 e7304a50150d28b7109de6d61c4f9d30 341 SMART SM00267 171 340 3.0E-48 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS04260 519531ac677f0bb16d0042cb55468504 765 SUPERFAMILY SSF52540 127 374 3.44E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS04260 519531ac677f0bb16d0042cb55468504 765 Gene3D G3DSA:3.40.50.300 2 193 9.4E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS04260 519531ac677f0bb16d0042cb55468504 765 Pfam PF04851 Type III restriction enzyme, res subunit 1 191 5.4E-17 T 22-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 SMGD1_RS04260 519531ac677f0bb16d0042cb55468504 765 SUPERFAMILY SSF52540 2 193 7.67E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS07715 0e2bb4027d834018c4bb53044660bc50 174 PANTHER PTHR10134 17 162 7.2E-26 T 22-04-2016 IPR014349 Rieske iron-sulphur protein GO:0016679|GO:0055114 SMGD1_RS07715 0e2bb4027d834018c4bb53044660bc50 174 SUPERFAMILY SSF50022 27 163 2.93E-29 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 SMGD1_RS07715 0e2bb4027d834018c4bb53044660bc50 174 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 5 26 7.8E-5 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal SMGD1_RS07715 0e2bb4027d834018c4bb53044660bc50 174 PANTHER PTHR10134:SF8 17 162 7.2E-26 T 22-04-2016 SMGD1_RS07715 0e2bb4027d834018c4bb53044660bc50 174 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 5 156 1.4E-43 T 22-04-2016 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 SMGD1_RS07715 0e2bb4027d834018c4bb53044660bc50 174 Pfam PF00355 Rieske [2Fe-2S] domain 60 144 4.0E-10 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 SMGD1_RS07715 0e2bb4027d834018c4bb53044660bc50 174 Gene3D G3DSA:2.102.10.10 9 160 6.4E-31 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 SMGD1_RS07715 0e2bb4027d834018c4bb53044660bc50 174 PRINTS PR00162 Rieske 2Fe-2S subunit signature 119 131 8.7E-7 T 22-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 SMGD1_RS07715 0e2bb4027d834018c4bb53044660bc50 174 PRINTS PR00162 Rieske 2Fe-2S subunit signature 131 143 8.7E-7 T 22-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 SMGD1_RS07715 0e2bb4027d834018c4bb53044660bc50 174 PRINTS PR00162 Rieske 2Fe-2S subunit signature 98 109 8.7E-7 T 22-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 SMGD1_RS05640 7bf19cbfffc7ba17a20a37ed9c1a4f49 282 Gene3D G3DSA:3.30.70.260 189 271 1.4E-21 T 22-04-2016 SMGD1_RS05640 7bf19cbfffc7ba17a20a37ed9c1a4f49 282 Gene3D G3DSA:3.40.190.10 1 88 1.3E-27 T 22-04-2016 SMGD1_RS05640 7bf19cbfffc7ba17a20a37ed9c1a4f49 282 Pfam PF00800 Prephenate dehydratase 5 180 5.6E-54 T 22-04-2016 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 SMGD1_RS05640 7bf19cbfffc7ba17a20a37ed9c1a4f49 282 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 155 177 - T 22-04-2016 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 SMGD1_RS05640 7bf19cbfffc7ba17a20a37ed9c1a4f49 282 PIRSF PIRSF001500 1 275 2.9E-65 T 22-04-2016 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 SMGD1_RS05640 7bf19cbfffc7ba17a20a37ed9c1a4f49 282 Gene3D G3DSA:3.40.190.10 89 166 3.7E-25 T 22-04-2016 SMGD1_RS05640 7bf19cbfffc7ba17a20a37ed9c1a4f49 282 SUPERFAMILY SSF55021 174 271 1.27E-19 T 22-04-2016 SMGD1_RS05640 7bf19cbfffc7ba17a20a37ed9c1a4f49 282 SUPERFAMILY SSF53850 4 184 7.27E-57 T 22-04-2016 SMGD1_RS05640 7bf19cbfffc7ba17a20a37ed9c1a4f49 282 PANTHER PTHR21022 4 271 1.5E-88 T 22-04-2016 SMGD1_RS03900 fd8c456e34dbd99f6004f2ba69e25398 76 Hamap MF_00167 Carbon storage regulator [csrA]. 1 70 18.311 T 22-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 SMGD1_RS03900 fd8c456e34dbd99f6004f2ba69e25398 76 Pfam PF02599 Global regulator protein family 1 52 3.6E-22 T 22-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 SMGD1_RS03900 fd8c456e34dbd99f6004f2ba69e25398 76 PANTHER PTHR34984 1 59 9.4E-17 T 22-04-2016 SMGD1_RS03900 fd8c456e34dbd99f6004f2ba69e25398 76 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 63 2.0E-21 T 22-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 SMGD1_RS03900 fd8c456e34dbd99f6004f2ba69e25398 76 PANTHER PTHR34984:SF1 1 59 9.4E-17 T 22-04-2016 SMGD1_RS03900 fd8c456e34dbd99f6004f2ba69e25398 76 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 49 4.0E-5 T 22-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 SMGD1_RS03900 fd8c456e34dbd99f6004f2ba69e25398 76 SUPERFAMILY SSF117130 1 52 1.57E-17 T 22-04-2016 SMGD1_RS04630 7a583e1441343b851e46d7e9a17e08ab 124 SUPERFAMILY SSF52833 8 109 5.59E-19 T 22-04-2016 IPR012336 Thioredoxin-like fold SMGD1_RS04630 7a583e1441343b851e46d7e9a17e08ab 124 Gene3D G3DSA:3.40.30.10 8 110 9.5E-24 T 22-04-2016 IPR012336 Thioredoxin-like fold SMGD1_RS04630 7a583e1441343b851e46d7e9a17e08ab 124 PANTHER PTHR11780 9 117 3.0E-18 T 22-04-2016 SMGD1_RS04630 7a583e1441343b851e46d7e9a17e08ab 124 PANTHER PTHR11780:SF12 9 117 3.0E-18 T 22-04-2016 SMGD1_RS01775 8e3f6d6ef98ad0e12a9525ab10fe6cb9 899 Gene3D G3DSA:3.20.20.450 651 896 2.9E-77 T 22-04-2016 IPR001633 EAL domain SMGD1_RS01775 8e3f6d6ef98ad0e12a9525ab10fe6cb9 899 Pfam PF13426 PAS domain 357 458 2.2E-14 T 22-04-2016 IPR000014 PAS domain SMGD1_RS01775 8e3f6d6ef98ad0e12a9525ab10fe6cb9 899 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 355 466 8.3E-18 T 22-04-2016 IPR000014 PAS domain SMGD1_RS01775 8e3f6d6ef98ad0e12a9525ab10fe6cb9 899 Pfam PF00563 EAL domain 653 884 1.2E-61 T 22-04-2016 IPR001633 EAL domain SMGD1_RS01775 8e3f6d6ef98ad0e12a9525ab10fe6cb9 899 SMART SM00267 460 637 1.2E-49 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS01775 8e3f6d6ef98ad0e12a9525ab10fe6cb9 899 SMART SM00086 418 460 6.2E-6 T 22-04-2016 IPR001610 PAC motif SMGD1_RS01775 8e3f6d6ef98ad0e12a9525ab10fe6cb9 899 Gene3D G3DSA:3.30.70.270 472 644 5.6E-48 T 22-04-2016 SMGD1_RS01775 8e3f6d6ef98ad0e12a9525ab10fe6cb9 899 SUPERFAMILY SSF55073 476 639 2.9E-43 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS01775 8e3f6d6ef98ad0e12a9525ab10fe6cb9 899 SUPERFAMILY SSF55785 355 457 3.32E-22 T 22-04-2016 IPR000014 PAS domain SMGD1_RS01775 8e3f6d6ef98ad0e12a9525ab10fe6cb9 899 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 468 636 1.6E-38 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS01775 8e3f6d6ef98ad0e12a9525ab10fe6cb9 899 SUPERFAMILY SSF141868 652 895 4.97E-73 T 22-04-2016 IPR001633 EAL domain SMGD1_RS01775 8e3f6d6ef98ad0e12a9525ab10fe6cb9 899 PANTHER PTHR33121:SF16 646 891 2.1E-55 T 22-04-2016 SMGD1_RS01775 8e3f6d6ef98ad0e12a9525ab10fe6cb9 899 SMART SM00052 647 890 1.8E-82 T 22-04-2016 IPR001633 EAL domain SMGD1_RS01775 8e3f6d6ef98ad0e12a9525ab10fe6cb9 899 Pfam PF08376 Nitrate and nitrite sensing 55 295 1.0E-23 T 22-04-2016 IPR013587 Nitrate/nitrite sensing protein SMGD1_RS01775 8e3f6d6ef98ad0e12a9525ab10fe6cb9 899 PANTHER PTHR33121 646 891 2.1E-55 T 22-04-2016 SMGD1_RS01775 8e3f6d6ef98ad0e12a9525ab10fe6cb9 899 Gene3D G3DSA:3.30.450.20 355 458 1.2E-21 T 22-04-2016 SMGD1_RS01775 8e3f6d6ef98ad0e12a9525ab10fe6cb9 899 Pfam PF00990 Diguanylate cyclase, GGDEF domain 471 633 1.9E-43 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS13645 1c604566eff942f3ff3aa1b94336675e 453 Pfam PF00877 NlpC/P60 family 313 394 1.5E-9 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SMGD1_RS13645 1c604566eff942f3ff3aa1b94336675e 453 SUPERFAMILY SSF54001 295 413 4.61E-11 T 22-04-2016 SMGD1_RS13645 1c604566eff942f3ff3aa1b94336675e 453 Gene3D G3DSA:3.90.1720.10 297 397 4.0E-13 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SMGD1_RS13645 1c604566eff942f3ff3aa1b94336675e 453 PIRSF PIRSF019015 4 453 1.8E-132 T 22-04-2016 IPR027017 Uncharacterised peptidase with NlpC/P60 domain, YkfC type SMGD1_RS13645 1c604566eff942f3ff3aa1b94336675e 453 Pfam PF12913 SH3 domain (SH3b1 type) 156 208 1.0E-23 T 22-04-2016 SMGD1_RS13645 1c604566eff942f3ff3aa1b94336675e 453 Pfam PF12914 SH3 domain of SH3b2 type 221 262 5.0E-8 T 22-04-2016 IPR026864 SH3b2-type SH3 domain SMGD1_RS13645 1c604566eff942f3ff3aa1b94336675e 453 Pfam PF12912 NLPC_P60 stabilising domain, N term 6 133 1.1E-19 T 22-04-2016 IPR025606 NLPC/P60, N-terminal domain SMGD1_RS05930 c0a9c04f90b4bedf4706cf49c996b66b 1163 Gene3D G3DSA:1.10.1240.10 629 711 2.8E-26 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain SMGD1_RS05930 c0a9c04f90b4bedf4706cf49c996b66b 1163 SUPERFAMILY SSF51717 340 604 3.14E-70 T 22-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 SMGD1_RS05930 c0a9c04f90b4bedf4706cf49c996b66b 1163 SUPERFAMILY SSF47644 632 713 1.96E-21 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain SMGD1_RS05930 c0a9c04f90b4bedf4706cf49c996b66b 1163 SMART SM01018 633 715 3.7E-36 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain SMGD1_RS05930 c0a9c04f90b4bedf4706cf49c996b66b 1163 Pfam PF02310 B12 binding domain 723 811 1.1E-15 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 SMGD1_RS05930 c0a9c04f90b4bedf4706cf49c996b66b 1163 Pfam PF00809 Pterin binding enzyme 343 576 5.9E-35 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 SMGD1_RS05930 c0a9c04f90b4bedf4706cf49c996b66b 1163 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 909 1163 1.4E-33 T 22-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 SMGD1_RS05930 c0a9c04f90b4bedf4706cf49c996b66b 1163 SUPERFAMILY SSF82282 5 382 4.05E-101 T 22-04-2016 IPR003726 Homocysteine-binding domain SMGD1_RS05930 c0a9c04f90b4bedf4706cf49c996b66b 1163 Pfam PF02607 B12 binding domain 637 707 2.7E-22 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain SMGD1_RS05930 c0a9c04f90b4bedf4706cf49c996b66b 1163 Gene3D G3DSA:3.40.50.280 723 846 2.0E-37 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 SMGD1_RS05930 c0a9c04f90b4bedf4706cf49c996b66b 1163 TIGRFAM TIGR02082 metH: methionine synthase 12 1163 0.0 T 22-04-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 SMGD1_RS05930 c0a9c04f90b4bedf4706cf49c996b66b 1163 PANTHER PTHR21091:SF97 1 377 2.5E-91 T 22-04-2016 SMGD1_RS05930 c0a9c04f90b4bedf4706cf49c996b66b 1163 Gene3D G3DSA:3.20.20.20 348 605 6.0E-81 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 SMGD1_RS05930 c0a9c04f90b4bedf4706cf49c996b66b 1163 SUPERFAMILY SSF56507 875 1163 2.62E-76 T 22-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 SMGD1_RS05930 c0a9c04f90b4bedf4706cf49c996b66b 1163 Gene3D G3DSA:3.20.20.330 2 347 6.6E-95 T 22-04-2016 IPR003726 Homocysteine-binding domain SMGD1_RS05930 c0a9c04f90b4bedf4706cf49c996b66b 1163 Gene3D G3DSA:3.10.196.10 926 1163 1.1E-59 T 22-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 SMGD1_RS05930 c0a9c04f90b4bedf4706cf49c996b66b 1163 PIRSF PIRSF000381 1 1163 0.0 T 22-04-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 SMGD1_RS05930 c0a9c04f90b4bedf4706cf49c996b66b 1163 SUPERFAMILY SSF52242 721 845 1.09E-32 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 SMGD1_RS05930 c0a9c04f90b4bedf4706cf49c996b66b 1163 PANTHER PTHR21091 1 377 2.5E-91 T 22-04-2016 SMGD1_RS05930 c0a9c04f90b4bedf4706cf49c996b66b 1163 Pfam PF02574 Homocysteine S-methyltransferase 16 307 4.7E-64 T 22-04-2016 IPR003726 Homocysteine-binding domain SMGD1_RS06890 c92486149e5776c5dcc119fba1426d6f 230 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 69 80 2.2E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMGD1_RS06890 c92486149e5776c5dcc119fba1426d6f 230 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 122 130 2.2E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMGD1_RS06890 c92486149e5776c5dcc119fba1426d6f 230 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 142 161 2.2E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMGD1_RS06890 c92486149e5776c5dcc119fba1426d6f 230 PANTHER PTHR24322 6 126 6.1E-48 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMGD1_RS06890 c92486149e5776c5dcc119fba1426d6f 230 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 193 213 6.3E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMGD1_RS06890 c92486149e5776c5dcc119fba1426d6f 230 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 6.3E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMGD1_RS06890 c92486149e5776c5dcc119fba1426d6f 230 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 69 80 6.3E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMGD1_RS06890 c92486149e5776c5dcc119fba1426d6f 230 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 180 6.3E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMGD1_RS06890 c92486149e5776c5dcc119fba1426d6f 230 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 116 132 6.3E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMGD1_RS06890 c92486149e5776c5dcc119fba1426d6f 230 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 142 161 6.3E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMGD1_RS06890 c92486149e5776c5dcc119fba1426d6f 230 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 2 182 0.0066 T 22-04-2016 SMGD1_RS06890 c92486149e5776c5dcc119fba1426d6f 230 Gene3D G3DSA:3.40.50.720 2 229 1.1E-76 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS06890 c92486149e5776c5dcc119fba1426d6f 230 PANTHER PTHR24322:SF513 142 174 6.1E-48 T 22-04-2016 SMGD1_RS06890 c92486149e5776c5dcc119fba1426d6f 230 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 228 2.0E-56 T 22-04-2016 SMGD1_RS06890 c92486149e5776c5dcc119fba1426d6f 230 SUPERFAMILY SSF51735 2 229 4.45E-73 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS06890 c92486149e5776c5dcc119fba1426d6f 230 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 129 157 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 SMGD1_RS06890 c92486149e5776c5dcc119fba1426d6f 230 PANTHER PTHR24322:SF513 6 126 6.1E-48 T 22-04-2016 SMGD1_RS06890 c92486149e5776c5dcc119fba1426d6f 230 PANTHER PTHR24322 142 174 6.1E-48 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMGD1_RS07690 7efa46b8fe6effa5bd9abc1a67d25e7b 206 SUPERFAMILY SSF63380 1 83 1.28E-13 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 SMGD1_RS07690 7efa46b8fe6effa5bd9abc1a67d25e7b 206 PANTHER PTHR21098:SF0 1 194 7.6E-63 T 22-04-2016 SMGD1_RS07690 7efa46b8fe6effa5bd9abc1a67d25e7b 206 PANTHER PTHR21098 1 194 7.6E-63 T 22-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SMGD1_RS07690 7efa46b8fe6effa5bd9abc1a67d25e7b 206 SUPERFAMILY SSF63380 83 187 9.35E-31 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 SMGD1_RS07690 7efa46b8fe6effa5bd9abc1a67d25e7b 206 Pfam PF00677 Lumazine binding domain 3 74 9.3E-12 T 22-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SMGD1_RS07690 7efa46b8fe6effa5bd9abc1a67d25e7b 206 Pfam PF00677 Lumazine binding domain 90 174 3.5E-20 T 22-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SMGD1_RS07690 7efa46b8fe6effa5bd9abc1a67d25e7b 206 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 191 6.6E-61 T 22-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SMGD1_RS07690 7efa46b8fe6effa5bd9abc1a67d25e7b 206 PIRSF PIRSF000498 1 202 1.1E-64 T 22-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SMGD1_RS07690 7efa46b8fe6effa5bd9abc1a67d25e7b 206 Gene3D G3DSA:2.40.30.20 5 94 4.2E-18 T 22-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SMGD1_RS07690 7efa46b8fe6effa5bd9abc1a67d25e7b 206 Gene3D G3DSA:2.40.30.20 95 189 2.4E-30 T 22-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SMGD1_RS07040 f297b0c9af5a355958370387ed5e7aea 503 PANTHER PTHR32145 10 250 1.2E-47 T 22-04-2016 SMGD1_RS07040 f297b0c9af5a355958370387ed5e7aea 503 Gene3D G3DSA:3.60.15.10 9 239 1.4E-50 T 22-04-2016 IPR001279 Metallo-beta-lactamase SMGD1_RS07040 f297b0c9af5a355958370387ed5e7aea 503 PRINTS PR00344 Bacterial sensor protein C-terminal signature 450 460 1.4E-7 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS07040 f297b0c9af5a355958370387ed5e7aea 503 PRINTS PR00344 Bacterial sensor protein C-terminal signature 463 481 1.4E-7 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS07040 f297b0c9af5a355958370387ed5e7aea 503 PRINTS PR00344 Bacterial sensor protein C-terminal signature 432 446 1.4E-7 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS07040 f297b0c9af5a355958370387ed5e7aea 503 Gene3D G3DSA:1.10.287.130 278 345 9.8E-5 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS07040 f297b0c9af5a355958370387ed5e7aea 503 Pfam PF00753 Metallo-beta-lactamase superfamily 29 219 1.1E-8 T 22-04-2016 IPR001279 Metallo-beta-lactamase SMGD1_RS07040 f297b0c9af5a355958370387ed5e7aea 503 Gene3D G3DSA:3.30.565.10 360 501 2.5E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS07040 f297b0c9af5a355958370387ed5e7aea 503 SUPERFAMILY SSF55874 352 499 2.88E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS07040 f297b0c9af5a355958370387ed5e7aea 503 SUPERFAMILY SSF47384 278 351 6.87E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS07040 f297b0c9af5a355958370387ed5e7aea 503 SMART SM00849 31 219 1.1E-12 T 22-04-2016 IPR001279 Metallo-beta-lactamase SMGD1_RS07040 f297b0c9af5a355958370387ed5e7aea 503 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 396 502 2.6E-14 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS07040 f297b0c9af5a355958370387ed5e7aea 503 SUPERFAMILY SSF56281 10 231 6.29E-27 T 22-04-2016 IPR001279 Metallo-beta-lactamase SMGD1_RS07040 f297b0c9af5a355958370387ed5e7aea 503 SMART SM00387 391 503 1.6E-13 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS07015 70bd9717af874384cbc6ed6c3f360e7e 394 Gene3D G3DSA:3.50.50.60 1 108 1.2E-26 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS07015 70bd9717af874384cbc6ed6c3f360e7e 394 Gene3D G3DSA:3.50.50.60 250 325 1.2E-26 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS07015 70bd9717af874384cbc6ed6c3f360e7e 394 PANTHER PTHR10632 1 379 1.7E-75 T 22-04-2016 SMGD1_RS07015 70bd9717af874384cbc6ed6c3f360e7e 394 PANTHER PTHR10632:SF7 1 379 1.7E-75 T 22-04-2016 SMGD1_RS07015 70bd9717af874384cbc6ed6c3f360e7e 394 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 96 114 3.2E-5 T 22-04-2016 SMGD1_RS07015 70bd9717af874384cbc6ed6c3f360e7e 394 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 273 295 3.2E-5 T 22-04-2016 SMGD1_RS07015 70bd9717af874384cbc6ed6c3f360e7e 394 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 3.2E-5 T 22-04-2016 SMGD1_RS07015 70bd9717af874384cbc6ed6c3f360e7e 394 Gene3D G3DSA:3.50.50.60 182 246 1.9E-6 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS07015 70bd9717af874384cbc6ed6c3f360e7e 394 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 299 5.7E-23 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS07015 70bd9717af874384cbc6ed6c3f360e7e 394 SUPERFAMILY SSF51905 3 107 2.11E-25 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS07015 70bd9717af874384cbc6ed6c3f360e7e 394 SUPERFAMILY SSF51905 243 326 2.11E-25 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS07015 70bd9717af874384cbc6ed6c3f360e7e 394 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 3 25 6.3E-5 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SMGD1_RS07015 70bd9717af874384cbc6ed6c3f360e7e 394 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 97 105 6.3E-5 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SMGD1_RS04875 3b7f6b9dde1f1315b8c81cd6fe28155b 61 SUPERFAMILY SSF57716 4 61 2.14E-21 T 22-04-2016 SMGD1_RS04875 3b7f6b9dde1f1315b8c81cd6fe28155b 61 Pfam PF00253 Ribosomal protein S14p/S29e 10 60 1.5E-24 T 22-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS04875 3b7f6b9dde1f1315b8c81cd6fe28155b 61 PANTHER PTHR19836 14 61 6.3E-33 T 22-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS04875 3b7f6b9dde1f1315b8c81cd6fe28155b 61 ProSitePatterns PS00527 Ribosomal protein S14 signature. 23 45 - T 22-04-2016 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 SMGD1_RS04875 3b7f6b9dde1f1315b8c81cd6fe28155b 61 Gene3D G3DSA:4.10.830.10 1 61 1.0E-27 T 22-04-2016 SMGD1_RS04875 3b7f6b9dde1f1315b8c81cd6fe28155b 61 Hamap MF_01364_B 30S ribosomal protein S14 type Z [rpsZ]. 1 61 26.379 T 22-04-2016 IPR023053 Ribosomal protein S14, type Z SMGD1_RS08020 54131d7af58740694ff30fcb4883a743 552 Pfam PF00682 HMGL-like 31 310 2.7E-72 T 22-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 SMGD1_RS08020 54131d7af58740694ff30fcb4883a743 552 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 38 54 - T 22-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 SMGD1_RS08020 54131d7af58740694ff30fcb4883a743 552 SUPERFAMILY SSF89000 387 437 6.67E-14 T 22-04-2016 SMGD1_RS08020 54131d7af58740694ff30fcb4883a743 552 SUPERFAMILY SSF110921 443 550 3.92E-30 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 SMGD1_RS08020 54131d7af58740694ff30fcb4883a743 552 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 240 253 - T 22-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 SMGD1_RS08020 54131d7af58740694ff30fcb4883a743 552 Pfam PF08502 LeuA allosteric (dimerisation) domain 421 550 2.6E-27 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 SMGD1_RS08020 54131d7af58740694ff30fcb4883a743 552 PANTHER PTHR10277 8 550 3.8E-250 T 22-04-2016 SMGD1_RS08020 54131d7af58740694ff30fcb4883a743 552 SUPERFAMILY SSF51569 20 327 1.19E-93 T 22-04-2016 SMGD1_RS08020 54131d7af58740694ff30fcb4883a743 552 SMART SM00917 421 551 1.1E-21 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 SMGD1_RS08020 54131d7af58740694ff30fcb4883a743 552 TIGRFAM TIGR00970 leuA_yeast: 2-isopropylmalate synthase 7 550 9.5E-221 T 22-04-2016 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 SMGD1_RS08020 54131d7af58740694ff30fcb4883a743 552 Hamap MF_00572 2-isopropylmalate synthase [leuA]. 6 552 50.558 T 22-04-2016 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 SMGD1_RS08020 54131d7af58740694ff30fcb4883a743 552 PANTHER PTHR10277:SF28 8 550 3.8E-250 T 22-04-2016 SMGD1_RS08020 54131d7af58740694ff30fcb4883a743 552 Gene3D G3DSA:3.20.20.70 8 393 3.7E-137 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMGD1_RS08465 b167db5c8cd961886e87a7de78dd9795 517 PANTHER PTHR22773:SF40 4 496 1.8E-181 T 22-04-2016 SMGD1_RS08465 b167db5c8cd961886e87a7de78dd9795 517 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 324 343 3.4E-41 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 SMGD1_RS08465 b167db5c8cd961886e87a7de78dd9795 517 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 376 402 3.4E-41 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 SMGD1_RS08465 b167db5c8cd961886e87a7de78dd9795 517 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 161 185 3.4E-41 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 SMGD1_RS08465 b167db5c8cd961886e87a7de78dd9795 517 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 131 150 3.4E-41 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 SMGD1_RS08465 b167db5c8cd961886e87a7de78dd9795 517 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 236 260 3.4E-41 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 SMGD1_RS08465 b167db5c8cd961886e87a7de78dd9795 517 PANTHER PTHR22773 4 496 1.8E-181 T 22-04-2016 SMGD1_RS08465 b167db5c8cd961886e87a7de78dd9795 517 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 6 484 7.1E-174 T 22-04-2016 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 SMGD1_RS08465 b167db5c8cd961886e87a7de78dd9795 517 Pfam PF00361 Proton-conducting membrane transporter 126 415 1.7E-69 T 22-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 SMGD1_RS05840 965e23405026a9d318f92e3a9e1b02fe 495 Gene3D G3DSA:3.50.50.60 360 427 2.4E-43 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS05840 965e23405026a9d318f92e3a9e1b02fe 495 Gene3D G3DSA:3.50.50.60 63 176 2.4E-43 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS05840 965e23405026a9d318f92e3a9e1b02fe 495 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 63 182 1.7E-11 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS05840 965e23405026a9d318f92e3a9e1b02fe 495 SUPERFAMILY SSF51905 274 325 7.34E-6 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS05840 965e23405026a9d318f92e3a9e1b02fe 495 SUPERFAMILY SSF51905 385 480 7.34E-6 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS05840 965e23405026a9d318f92e3a9e1b02fe 495 SUPERFAMILY SSF51905 62 219 7.78E-26 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS05840 965e23405026a9d318f92e3a9e1b02fe 495 PANTHER PTHR10632:SF2 7 493 1.5E-116 T 22-04-2016 SMGD1_RS05840 965e23405026a9d318f92e3a9e1b02fe 495 SUPERFAMILY SSF51905 210 324 9.44E-15 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS05840 965e23405026a9d318f92e3a9e1b02fe 495 PANTHER PTHR10632 7 493 1.5E-116 T 22-04-2016 SMGD1_RS00540 fd0c613206d5e9bf317b72668c513e7b 449 Pfam PF03841 L-seryl-tRNA selenium transferase 74 431 4.1E-142 T 22-04-2016 IPR018319 L-seryl-tRNA selenium transferase-like KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1|UniPathway: UPA00906 SMGD1_RS00540 fd0c613206d5e9bf317b72668c513e7b 449 Gene3D G3DSA:3.40.640.10 111 312 9.0E-24 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SMGD1_RS00540 fd0c613206d5e9bf317b72668c513e7b 449 TIGRFAM TIGR00474 selA: L-seryl-tRNA(Sec) selenium transferase 4 443 1.6E-173 T 22-04-2016 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1|UniPathway: UPA00906 SMGD1_RS00540 fd0c613206d5e9bf317b72668c513e7b 449 PANTHER PTHR32328:SF0 1 446 2.3E-158 T 22-04-2016 SMGD1_RS00540 fd0c613206d5e9bf317b72668c513e7b 449 SUPERFAMILY SSF53383 65 446 8.66E-44 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SMGD1_RS00540 fd0c613206d5e9bf317b72668c513e7b 449 PANTHER PTHR32328 1 446 2.3E-158 T 22-04-2016 SMGD1_RS00540 fd0c613206d5e9bf317b72668c513e7b 449 Hamap MF_00423 L-seryl-tRNA(Sec) selenium transferase [selA]. 1 449 184.606 T 22-04-2016 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1|UniPathway: UPA00906 SMGD1_RS00795 9904cbb161b30608ed12b2ef4698574e 373 PIRSF PIRSF000390 1 372 7.6E-80 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase SMGD1_RS00795 9904cbb161b30608ed12b2ef4698574e 373 PANTHER PTHR30244:SF3 1 372 1.6E-79 T 22-04-2016 SMGD1_RS00795 9904cbb161b30608ed12b2ef4698574e 373 Gene3D G3DSA:3.40.640.10 2 246 1.2E-64 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SMGD1_RS00795 9904cbb161b30608ed12b2ef4698574e 373 SUPERFAMILY SSF53383 11 369 4.31E-87 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SMGD1_RS00795 9904cbb161b30608ed12b2ef4698574e 373 PANTHER PTHR30244 1 372 1.6E-79 T 22-04-2016 SMGD1_RS00795 9904cbb161b30608ed12b2ef4698574e 373 Gene3D G3DSA:3.90.1150.10 250 370 1.2E-27 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SMGD1_RS00795 9904cbb161b30608ed12b2ef4698574e 373 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 13 365 2.9E-82 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase SMGD1_RS03435 648fc17ef8ca549fd5d1a727b5a7e453 1514 SUPERFAMILY SSF55785 387 506 7.78E-14 T 22-04-2016 IPR000014 PAS domain SMGD1_RS03435 648fc17ef8ca549fd5d1a727b5a7e453 1514 SUPERFAMILY SSF55785 779 886 1.92E-10 T 22-04-2016 IPR000014 PAS domain SMGD1_RS03435 648fc17ef8ca549fd5d1a727b5a7e453 1514 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1406 1512 1.4E-14 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS03435 648fc17ef8ca549fd5d1a727b5a7e453 1514 Gene3D G3DSA:3.30.450.20 1156 1277 2.3E-17 T 22-04-2016 SMGD1_RS03435 648fc17ef8ca549fd5d1a727b5a7e453 1514 Gene3D G3DSA:3.30.450.20 394 505 3.7E-13 T 22-04-2016 SMGD1_RS03435 648fc17ef8ca549fd5d1a727b5a7e453 1514 Gene3D G3DSA:3.30.450.20 887 1003 5.6E-22 T 22-04-2016 SMGD1_RS03435 648fc17ef8ca549fd5d1a727b5a7e453 1514 SMART SM00091 397 464 1.7E-4 T 22-04-2016 IPR000014 PAS domain SMGD1_RS03435 648fc17ef8ca549fd5d1a727b5a7e453 1514 SMART SM00091 768 836 24.0 T 22-04-2016 IPR000014 PAS domain SMGD1_RS03435 648fc17ef8ca549fd5d1a727b5a7e453 1514 SMART SM00091 896 962 0.0021 T 22-04-2016 IPR000014 PAS domain SMGD1_RS03435 648fc17ef8ca549fd5d1a727b5a7e453 1514 SMART SM00091 649 715 1.1E-6 T 22-04-2016 IPR000014 PAS domain SMGD1_RS03435 648fc17ef8ca549fd5d1a727b5a7e453 1514 SMART SM00091 1163 1230 1.9E-5 T 22-04-2016 IPR000014 PAS domain SMGD1_RS03435 648fc17ef8ca549fd5d1a727b5a7e453 1514 SMART SM00091 520 588 1.3E-8 T 22-04-2016 IPR000014 PAS domain SMGD1_RS03435 648fc17ef8ca549fd5d1a727b5a7e453 1514 SMART SM00091 1025 1096 3.6E-4 T 22-04-2016 IPR000014 PAS domain SMGD1_RS03435 648fc17ef8ca549fd5d1a727b5a7e453 1514 SUPERFAMILY SSF55785 1031 1146 2.26E-16 T 22-04-2016 IPR000014 PAS domain SMGD1_RS03435 648fc17ef8ca549fd5d1a727b5a7e453 1514 Gene3D G3DSA:3.30.450.40 229 393 2.2E-10 T 22-04-2016 IPR029016 GAF domain-like SMGD1_RS03435 648fc17ef8ca549fd5d1a727b5a7e453 1514 SUPERFAMILY SSF55785 1156 1277 8.2E-13 T 22-04-2016 IPR000014 PAS domain SMGD1_RS03435 648fc17ef8ca549fd5d1a727b5a7e453 1514 SUPERFAMILY SSF55874 1362 1512 3.67E-30 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS03435 648fc17ef8ca549fd5d1a727b5a7e453 1514 SUPERFAMILY SSF55785 881 1011 5.06E-20 T 22-04-2016 IPR000014 PAS domain SMGD1_RS03435 648fc17ef8ca549fd5d1a727b5a7e453 1514 Pfam PF12729 Four helix bundle sensory module for signal transduction 14 187 1.4E-18 T 22-04-2016 IPR024478 4HB MCP domain SMGD1_RS03435 648fc17ef8ca549fd5d1a727b5a7e453 1514 Pfam PF08447 PAS fold 1051 1138 1.1E-17 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 SMGD1_RS03435 648fc17ef8ca549fd5d1a727b5a7e453 1514 Pfam PF08447 PAS fold 543 630 1.4E-24 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 SMGD1_RS03435 648fc17ef8ca549fd5d1a727b5a7e453 1514 Pfam PF08447 PAS fold 793 874 1.9E-9 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 SMGD1_RS03435 648fc17ef8ca549fd5d1a727b5a7e453 1514 SMART SM00086 595 637 3.3E-10 T 22-04-2016 IPR001610 PAC motif SMGD1_RS03435 648fc17ef8ca549fd5d1a727b5a7e453 1514 SMART SM00086 971 1013 2.4E-4 T 22-04-2016 IPR001610 PAC motif SMGD1_RS03435 648fc17ef8ca549fd5d1a727b5a7e453 1514 SMART SM00086 843 884 39.0 T 22-04-2016 IPR001610 PAC motif SMGD1_RS03435 648fc17ef8ca549fd5d1a727b5a7e453 1514 SMART SM00086 468 508 26.0 T 22-04-2016 IPR001610 PAC motif SMGD1_RS03435 648fc17ef8ca549fd5d1a727b5a7e453 1514 SMART SM00086 722 763 5.3 T 22-04-2016 IPR001610 PAC motif SMGD1_RS03435 648fc17ef8ca549fd5d1a727b5a7e453 1514 SMART SM00086 1102 1144 0.78 T 22-04-2016 IPR001610 PAC motif SMGD1_RS03435 648fc17ef8ca549fd5d1a727b5a7e453 1514 SMART SM00086 1237 1279 46.0 T 22-04-2016 IPR001610 PAC motif SMGD1_RS03435 648fc17ef8ca549fd5d1a727b5a7e453 1514 SMART SM00387 1404 1514 3.2E-14 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS03435 648fc17ef8ca549fd5d1a727b5a7e453 1514 Pfam PF13426 PAS domain 1173 1278 5.0E-8 T 22-04-2016 IPR000014 PAS domain SMGD1_RS03435 648fc17ef8ca549fd5d1a727b5a7e453 1514 Pfam PF13426 PAS domain 412 507 8.5E-6 T 22-04-2016 IPR000014 PAS domain SMGD1_RS03435 648fc17ef8ca549fd5d1a727b5a7e453 1514 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 1160 1281 5.6E-17 T 22-04-2016 IPR000014 PAS domain SMGD1_RS03435 648fc17ef8ca549fd5d1a727b5a7e453 1514 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 394 513 4.6E-14 T 22-04-2016 IPR000014 PAS domain SMGD1_RS03435 648fc17ef8ca549fd5d1a727b5a7e453 1514 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 649 769 4.3E-14 T 22-04-2016 IPR000014 PAS domain SMGD1_RS03435 648fc17ef8ca549fd5d1a727b5a7e453 1514 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 893 1019 8.3E-12 T 22-04-2016 IPR000014 PAS domain SMGD1_RS03435 648fc17ef8ca549fd5d1a727b5a7e453 1514 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 518 642 4.9E-19 T 22-04-2016 IPR000014 PAS domain SMGD1_RS03435 648fc17ef8ca549fd5d1a727b5a7e453 1514 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 1051 1151 2.4E-7 T 22-04-2016 IPR000014 PAS domain SMGD1_RS03435 648fc17ef8ca549fd5d1a727b5a7e453 1514 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1445 1459 1.2E-5 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS03435 648fc17ef8ca549fd5d1a727b5a7e453 1514 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1463 1473 1.2E-5 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS03435 648fc17ef8ca549fd5d1a727b5a7e453 1514 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1476 1494 1.2E-5 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS03435 648fc17ef8ca549fd5d1a727b5a7e453 1514 Gene3D G3DSA:3.30.450.20 1004 1155 3.2E-22 T 22-04-2016 SMGD1_RS03435 648fc17ef8ca549fd5d1a727b5a7e453 1514 Gene3D G3DSA:3.30.450.20 750 886 1.6E-24 T 22-04-2016 SMGD1_RS03435 648fc17ef8ca549fd5d1a727b5a7e453 1514 Gene3D G3DSA:3.30.450.20 506 643 2.9E-33 T 22-04-2016 SMGD1_RS03435 648fc17ef8ca549fd5d1a727b5a7e453 1514 SUPERFAMILY SSF55785 633 755 4.54E-20 T 22-04-2016 IPR000014 PAS domain SMGD1_RS03435 648fc17ef8ca549fd5d1a727b5a7e453 1514 SUPERFAMILY SSF55781 228 388 7.63E-6 T 22-04-2016 IPR029016 GAF domain-like SMGD1_RS03435 648fc17ef8ca549fd5d1a727b5a7e453 1514 Gene3D G3DSA:3.30.565.10 1366 1512 3.2E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS03435 648fc17ef8ca549fd5d1a727b5a7e453 1514 SUPERFAMILY SSF47384 1289 1362 1.37E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS03435 648fc17ef8ca549fd5d1a727b5a7e453 1514 SUPERFAMILY SSF55785 525 639 2.62E-25 T 22-04-2016 IPR000014 PAS domain SMGD1_RS03435 648fc17ef8ca549fd5d1a727b5a7e453 1514 Gene3D G3DSA:3.30.450.20 644 749 6.8E-18 T 22-04-2016 SMGD1_RS03435 648fc17ef8ca549fd5d1a727b5a7e453 1514 PANTHER PTHR24423 1292 1512 6.4E-78 T 22-04-2016 SMGD1_RS03435 648fc17ef8ca549fd5d1a727b5a7e453 1514 PANTHER PTHR24423 1143 1161 6.4E-78 T 22-04-2016 SMGD1_RS03435 648fc17ef8ca549fd5d1a727b5a7e453 1514 PANTHER PTHR24423 971 1011 6.4E-78 T 22-04-2016 SMGD1_RS03435 648fc17ef8ca549fd5d1a727b5a7e453 1514 PANTHER PTHR24423 501 720 6.4E-78 T 22-04-2016 SMGD1_RS03435 648fc17ef8ca549fd5d1a727b5a7e453 1514 SMART SM00388 1294 1364 0.0015 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS03435 648fc17ef8ca549fd5d1a727b5a7e453 1514 Pfam PF08448 PAS fold 908 1013 4.8E-7 T 22-04-2016 IPR013656 PAS fold-4 SMGD1_RS03435 648fc17ef8ca549fd5d1a727b5a7e453 1514 Pfam PF08448 PAS fold 657 764 5.0E-14 T 22-04-2016 IPR013656 PAS fold-4 SMGD1_RS12360 3225de4a01b77324bca986b620e1af4e 308 SUPERFAMILY SSF47384 83 155 4.51E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS12360 3225de4a01b77324bca986b620e1af4e 308 PANTHER PTHR24423:SF445 41 306 2.0E-36 T 22-04-2016 SMGD1_RS12360 3225de4a01b77324bca986b620e1af4e 308 Gene3D G3DSA:1.10.287.130 87 152 9.3E-4 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS12360 3225de4a01b77324bca986b620e1af4e 308 SUPERFAMILY SSF55874 155 306 1.57E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS12360 3225de4a01b77324bca986b620e1af4e 308 PANTHER PTHR24423 41 306 2.0E-36 T 22-04-2016 SMGD1_RS12360 3225de4a01b77324bca986b620e1af4e 308 SMART SM00387 198 308 8.6E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS12360 3225de4a01b77324bca986b620e1af4e 308 Gene3D G3DSA:3.30.565.10 166 306 4.4E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS12360 3225de4a01b77324bca986b620e1af4e 308 PRINTS PR00344 Bacterial sensor protein C-terminal signature 270 288 2.3E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS12360 3225de4a01b77324bca986b620e1af4e 308 PRINTS PR00344 Bacterial sensor protein C-terminal signature 294 307 2.3E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS12360 3225de4a01b77324bca986b620e1af4e 308 PRINTS PR00344 Bacterial sensor protein C-terminal signature 257 267 2.3E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS12360 3225de4a01b77324bca986b620e1af4e 308 PRINTS PR00344 Bacterial sensor protein C-terminal signature 239 253 2.3E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS12360 3225de4a01b77324bca986b620e1af4e 308 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 201 304 1.7E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS06910 2ca771f6e12ee67f5702b39a83f37308 88 SUPERFAMILY SSF47336 10 86 1.96E-9 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain SMGD1_RS06910 2ca771f6e12ee67f5702b39a83f37308 88 Gene3D G3DSA:1.10.1200.10 4 86 1.5E-13 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain SMGD1_RS06910 2ca771f6e12ee67f5702b39a83f37308 88 Pfam PF00550 Phosphopantetheine attachment site 19 83 4.9E-5 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain SMGD1_RS09625 c12af9456df2b95e5cb0e0133ff0c93e 794 Gene3D G3DSA:3.30.450.20 235 351 1.1E-12 T 22-04-2016 SMGD1_RS09625 c12af9456df2b95e5cb0e0133ff0c93e 794 Pfam PF08447 PAS fold 264 346 5.3E-8 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 SMGD1_RS09625 c12af9456df2b95e5cb0e0133ff0c93e 794 Gene3D G3DSA:3.30.70.270 365 531 3.1E-61 T 22-04-2016 SMGD1_RS09625 c12af9456df2b95e5cb0e0133ff0c93e 794 Pfam PF00990 Diguanylate cyclase, GGDEF domain 364 521 9.2E-54 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS09625 c12af9456df2b95e5cb0e0133ff0c93e 794 Gene3D G3DSA:3.20.20.450 538 789 4.4E-94 T 22-04-2016 IPR001633 EAL domain SMGD1_RS09625 c12af9456df2b95e5cb0e0133ff0c93e 794 Pfam PF00563 EAL domain 541 777 1.1E-69 T 22-04-2016 IPR001633 EAL domain SMGD1_RS09625 c12af9456df2b95e5cb0e0133ff0c93e 794 SMART SM00052 535 782 7.6E-107 T 22-04-2016 IPR001633 EAL domain SMGD1_RS09625 c12af9456df2b95e5cb0e0133ff0c93e 794 SMART SM00267 353 525 1.0E-71 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS09625 c12af9456df2b95e5cb0e0133ff0c93e 794 SUPERFAMILY SSF141868 542 791 6.41E-87 T 22-04-2016 IPR001633 EAL domain SMGD1_RS09625 c12af9456df2b95e5cb0e0133ff0c93e 794 PANTHER PTHR33121:SF13 489 794 8.6E-77 T 22-04-2016 SMGD1_RS09625 c12af9456df2b95e5cb0e0133ff0c93e 794 PANTHER PTHR33121:SF13 346 361 8.6E-77 T 22-04-2016 SMGD1_RS09625 c12af9456df2b95e5cb0e0133ff0c93e 794 SUPERFAMILY SSF55073 369 527 3.14E-53 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS09625 c12af9456df2b95e5cb0e0133ff0c93e 794 PANTHER PTHR33121 489 794 8.6E-77 T 22-04-2016 SMGD1_RS09625 c12af9456df2b95e5cb0e0133ff0c93e 794 PANTHER PTHR33121 346 361 8.6E-77 T 22-04-2016 SMGD1_RS09625 c12af9456df2b95e5cb0e0133ff0c93e 794 SUPERFAMILY SSF55785 251 351 7.23E-9 T 22-04-2016 IPR000014 PAS domain SMGD1_RS09625 c12af9456df2b95e5cb0e0133ff0c93e 794 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 360 524 4.2E-50 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS09200 e7016ec8462d0b4e746334809ab045cb 301 Gene3D G3DSA:3.30.450.20 40 137 1.4E-18 T 22-04-2016 SMGD1_RS09200 e7016ec8462d0b4e746334809ab045cb 301 SUPERFAMILY SSF103190 43 144 9.16E-17 T 22-04-2016 IPR029151 Periplasmic sensor domain-like SMGD1_RS02660 7bb4de5b0323e2f0522d7a6f8ab500f9 520 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 3 247 9.8E-46 T 22-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 SMGD1_RS02660 7bb4de5b0323e2f0522d7a6f8ab500f9 520 PIRSF PIRSF000538 1 511 2.3E-137 T 22-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 SMGD1_RS02660 7bb4de5b0323e2f0522d7a6f8ab500f9 520 PANTHER PTHR10196 3 514 2.8E-224 T 22-04-2016 SMGD1_RS02660 7bb4de5b0323e2f0522d7a6f8ab500f9 520 PANTHER PTHR10196:SF70 3 514 2.8E-224 T 22-04-2016 SMGD1_RS02660 7bb4de5b0323e2f0522d7a6f8ab500f9 520 Gene3D G3DSA:3.30.420.40 252 506 1.8E-37 T 22-04-2016 SMGD1_RS02660 7bb4de5b0323e2f0522d7a6f8ab500f9 520 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 293 457 2.1E-20 T 22-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 SMGD1_RS02660 7bb4de5b0323e2f0522d7a6f8ab500f9 520 SUPERFAMILY SSF53067 251 504 1.22E-44 T 22-04-2016 SMGD1_RS02660 7bb4de5b0323e2f0522d7a6f8ab500f9 520 SUPERFAMILY SSF53067 3 252 7.03E-50 T 22-04-2016 SMGD1_RS02660 7bb4de5b0323e2f0522d7a6f8ab500f9 520 Gene3D G3DSA:3.30.420.40 2 249 5.3E-52 T 22-04-2016 SMGD1_RS10355 d13a8e229146116d1a99e199fc147c68 534 Pfam PF14827 Double sensory domain of two-component sensor kinase 58 319 2.5E-27 T 22-04-2016 IPR029150 Double Cache domain 3 SMGD1_RS10355 d13a8e229146116d1a99e199fc147c68 534 PANTHER PTHR10799:SF750 407 533 7.9E-38 T 22-04-2016 SMGD1_RS10355 d13a8e229146116d1a99e199fc147c68 534 Pfam PF00990 Diguanylate cyclase, GGDEF domain 375 527 3.3E-46 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS10355 d13a8e229146116d1a99e199fc147c68 534 Gene3D G3DSA:3.30.70.270 376 532 1.5E-50 T 22-04-2016 SMGD1_RS10355 d13a8e229146116d1a99e199fc147c68 534 PANTHER PTHR10799:SF750 17 68 7.9E-38 T 22-04-2016 SMGD1_RS10355 d13a8e229146116d1a99e199fc147c68 534 SMART SM00267 363 531 9.1E-58 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS10355 d13a8e229146116d1a99e199fc147c68 534 SUPERFAMILY SSF55073 379 532 3.53E-46 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS10355 d13a8e229146116d1a99e199fc147c68 534 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 375 530 2.7E-52 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS10355 d13a8e229146116d1a99e199fc147c68 534 PANTHER PTHR10799 407 533 7.9E-38 T 22-04-2016 SMGD1_RS10355 d13a8e229146116d1a99e199fc147c68 534 PANTHER PTHR10799 17 68 7.9E-38 T 22-04-2016 SMGD1_RS10355 d13a8e229146116d1a99e199fc147c68 534 SUPERFAMILY SSF103190 62 195 8.24E-11 T 22-04-2016 IPR029151 Periplasmic sensor domain-like SMGD1_RS03870 94e664d700d25033383562ae44179b0f 443 SUPERFAMILY SSF52129 8 249 5.38E-51 T 22-04-2016 IPR029030 Caspase-like domain SMGD1_RS03870 94e664d700d25033383562ae44179b0f 443 SMART SM00115 22 251 8.4E-5 T 22-04-2016 IPR015917 Peptidase C14A, caspase catalytic domain GO:0006915|GO:0008234 SMGD1_RS03870 94e664d700d25033383562ae44179b0f 443 PANTHER PTHR22576:SF30 1 261 2.6E-72 T 22-04-2016 SMGD1_RS03870 94e664d700d25033383562ae44179b0f 443 Pfam PF00656 Caspase domain 31 249 2.1E-29 T 22-04-2016 SMGD1_RS03870 94e664d700d25033383562ae44179b0f 443 PANTHER PTHR22576 1 261 2.6E-72 T 22-04-2016 SMGD1_RS03870 94e664d700d25033383562ae44179b0f 443 Gene3D G3DSA:3.40.50.1460 19 249 1.7E-20 T 22-04-2016 IPR029030 Caspase-like domain SMGD1_RS07770 b063012f65d412b3ef82859be37ddfc6 227 Pfam PF04452 RNA methyltransferase 19 225 2.5E-33 T 22-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SMGD1_RS07770 b063012f65d412b3ef82859be37ddfc6 227 PANTHER PTHR30027:SF3 1 227 1.0E-12 T 22-04-2016 SMGD1_RS07770 b063012f65d412b3ef82859be37ddfc6 227 PANTHER PTHR30027 1 227 1.0E-12 T 22-04-2016 SMGD1_RS07770 b063012f65d412b3ef82859be37ddfc6 227 SUPERFAMILY SSF75217 80 226 1.5E-25 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases SMGD1_RS07770 b063012f65d412b3ef82859be37ddfc6 227 PIRSF PIRSF015601 3 227 4.2E-33 T 22-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SMGD1_RS07770 b063012f65d412b3ef82859be37ddfc6 227 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 8 225 2.2E-39 T 22-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SMGD1_RS07770 b063012f65d412b3ef82859be37ddfc6 227 Gene3D G3DSA:3.40.1280.10 4 225 1.5E-29 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SMGD1_RS11485 04411c758381b31605a59e9b9c5b08f5 191 SUPERFAMILY SSF54211 3 126 2.88E-35 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SMGD1_RS11485 04411c758381b31605a59e9b9c5b08f5 191 Gene3D G3DSA:3.30.230.30 3 126 2.1E-36 T 22-04-2016 IPR001498 Impact, N-terminal SMGD1_RS11485 04411c758381b31605a59e9b9c5b08f5 191 PANTHER PTHR16301 1 162 6.3E-35 T 22-04-2016 IPR023582 Impact family SMGD1_RS11485 04411c758381b31605a59e9b9c5b08f5 191 Pfam PF01205 Uncharacterized protein family UPF0029 15 118 5.5E-23 T 22-04-2016 IPR001498 Impact, N-terminal SMGD1_RS07070 277e30a31a57aa2376ba2a531e1ea3aa 477 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 16 452 8.0E-62 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SMGD1_RS07070 277e30a31a57aa2376ba2a531e1ea3aa 477 PANTHER PTHR10422 19 463 4.0E-35 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SMGD1_RS07070 277e30a31a57aa2376ba2a531e1ea3aa 477 Gene3D G3DSA:1.20.210.10 12 466 2.1E-10 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SMGD1_RS07070 277e30a31a57aa2376ba2a531e1ea3aa 477 PANTHER PTHR10422:SF24 19 463 4.0E-35 T 22-04-2016 SMGD1_RS07070 277e30a31a57aa2376ba2a531e1ea3aa 477 SUPERFAMILY SSF81442 12 468 2.22E-68 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SMGD1_RS10565 9f887f549a18ea1fde962abe6b221945 372 SUPERFAMILY SSF58104 166 370 5.23E-45 T 22-04-2016 SMGD1_RS10565 9f887f549a18ea1fde962abe6b221945 372 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 237 370 3.5E-32 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SMGD1_RS10565 9f887f549a18ea1fde962abe6b221945 372 Gene3D G3DSA:1.10.287.950 192 370 1.1E-41 T 22-04-2016 SMGD1_RS10565 9f887f549a18ea1fde962abe6b221945 372 PANTHER PTHR32089 108 370 3.8E-41 T 22-04-2016 SMGD1_RS10565 9f887f549a18ea1fde962abe6b221945 372 SMART SM00283 167 370 2.9E-13 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SMGD1_RS03195 14076cc2564595f08b92d4de22faf587 323 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 10 294 26.939 T 22-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 SMGD1_RS03195 14076cc2564595f08b92d4de22faf587 323 SUPERFAMILY SSF82866 75 291 1.01E-37 T 22-04-2016 SMGD1_RS03195 14076cc2564595f08b92d4de22faf587 323 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 38 283 6.1E-82 T 22-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 SMGD1_RS03195 14076cc2564595f08b92d4de22faf587 323 Pfam PF02355 Protein export membrane protein 110 291 1.4E-68 T 22-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial SMGD1_RS03195 14076cc2564595f08b92d4de22faf587 323 Pfam PF07549 SecD/SecF GG Motif 33 59 3.1E-11 T 22-04-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site SMGD1_RS03195 14076cc2564595f08b92d4de22faf587 323 PANTHER PTHR30081 1 322 1.4E-73 T 22-04-2016 SMGD1_RS03195 14076cc2564595f08b92d4de22faf587 323 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 117 280 1.7E-54 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial SMGD1_RS03195 14076cc2564595f08b92d4de22faf587 323 PRINTS PR01755 Bacterial translocase SecF protein signature 151 165 6.7E-31 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial SMGD1_RS03195 14076cc2564595f08b92d4de22faf587 323 PRINTS PR01755 Bacterial translocase SecF protein signature 37 52 6.7E-31 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial SMGD1_RS03195 14076cc2564595f08b92d4de22faf587 323 PRINTS PR01755 Bacterial translocase SecF protein signature 199 217 6.7E-31 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial SMGD1_RS03195 14076cc2564595f08b92d4de22faf587 323 PRINTS PR01755 Bacterial translocase SecF protein signature 231 246 6.7E-31 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial SMGD1_RS03195 14076cc2564595f08b92d4de22faf587 323 Gene3D G3DSA:1.20.1640.10 132 291 9.2E-27 T 22-04-2016 SMGD1_RS12895 7a38bd905d0542ac881a67a1fbe8b0c5 184 PANTHER PTHR10108 1 126 1.1E-15 T 22-04-2016 SMGD1_RS12895 7a38bd905d0542ac881a67a1fbe8b0c5 184 SUPERFAMILY SSF53335 6 183 5.68E-24 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS12895 7a38bd905d0542ac881a67a1fbe8b0c5 184 Pfam PF03848 Tellurite resistance protein TehB 4 176 9.8E-16 T 22-04-2016 IPR015985 Tellurite resistance methyltransferase TehB-like domain SMGD1_RS12895 7a38bd905d0542ac881a67a1fbe8b0c5 184 PANTHER PTHR10108:SF838 1 126 1.1E-15 T 22-04-2016 SMGD1_RS12895 7a38bd905d0542ac881a67a1fbe8b0c5 184 Gene3D G3DSA:3.40.50.150 6 183 1.3E-23 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS09740 f0c3554fb53ed5142dc0727861ae16b9 195 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 189 38.056 T 22-04-2016 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478|UniPathway: UPA00041 SMGD1_RS09740 f0c3554fb53ed5142dc0727861ae16b9 195 TIGRFAM TIGR00441 gmhA: phosphoheptose isomerase 35 186 1.9E-63 T 22-04-2016 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478|UniPathway: UPA00041 SMGD1_RS09740 f0c3554fb53ed5142dc0727861ae16b9 195 Gene3D G3DSA:3.40.50.10490 1 191 4.2E-60 T 22-04-2016 SMGD1_RS09740 f0c3554fb53ed5142dc0727861ae16b9 195 PANTHER PTHR30390 1 190 7.1E-86 T 22-04-2016 SMGD1_RS09740 f0c3554fb53ed5142dc0727861ae16b9 195 Pfam PF13580 SIS domain 23 146 2.7E-28 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 SMGD1_RS09740 f0c3554fb53ed5142dc0727861ae16b9 195 SUPERFAMILY SSF53697 2 189 1.94E-52 T 22-04-2016 SMGD1_RS09740 f0c3554fb53ed5142dc0727861ae16b9 195 PANTHER PTHR30390:SF6 1 190 7.1E-86 T 22-04-2016 SMGD1_RS09210 6e881b8040f9b809b05edf2f64b4fe1e 236 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 3 229 1.5E-79 T 22-04-2016 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 SMGD1_RS09210 6e881b8040f9b809b05edf2f64b4fe1e 236 Gene3D G3DSA:3.20.20.70 3 235 3.5E-76 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMGD1_RS09210 6e881b8040f9b809b05edf2f64b4fe1e 236 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 2 234 34.698 T 22-04-2016 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 SMGD1_RS09210 6e881b8040f9b809b05edf2f64b4fe1e 236 SUPERFAMILY SSF51366 3 234 5.38E-66 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 SMGD1_RS09210 6e881b8040f9b809b05edf2f64b4fe1e 236 PANTHER PTHR21235 1 234 5.8E-90 T 22-04-2016 SMGD1_RS09210 6e881b8040f9b809b05edf2f64b4fe1e 236 PANTHER PTHR21235:SF15 1 234 5.8E-90 T 22-04-2016 SMGD1_RS09210 6e881b8040f9b809b05edf2f64b4fe1e 236 Pfam PF00977 Histidine biosynthesis protein 3 226 2.5E-73 T 22-04-2016 IPR006062 Histidine biosynthesis GO:0000105 SMGD1_RS13995 7e6f0bfcf205e6341f81caeaec7cea3e 593 SUPERFAMILY SSF47819 520 590 1.18E-21 T 22-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 SMGD1_RS13995 7e6f0bfcf205e6341f81caeaec7cea3e 593 SUPERFAMILY SSF46785 397 508 3.4E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMGD1_RS13995 7e6f0bfcf205e6341f81caeaec7cea3e 593 PANTHER PTHR13710 5 587 2.1E-234 T 22-04-2016 SMGD1_RS13995 7e6f0bfcf205e6341f81caeaec7cea3e 593 Pfam PF09382 RQC domain 399 504 5.3E-29 T 22-04-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 SMGD1_RS13995 7e6f0bfcf205e6341f81caeaec7cea3e 593 SMART SM00490 241 322 4.0E-26 T 22-04-2016 IPR001650 Helicase, C-terminal SMGD1_RS13995 7e6f0bfcf205e6341f81caeaec7cea3e 593 Pfam PF00271 Helicase conserved C-terminal domain 217 322 1.1E-17 T 22-04-2016 IPR001650 Helicase, C-terminal SMGD1_RS13995 7e6f0bfcf205e6341f81caeaec7cea3e 593 SMART SM00487 12 206 1.3E-26 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SMGD1_RS13995 7e6f0bfcf205e6341f81caeaec7cea3e 593 SMART SM00341 518 592 1.4E-14 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 SMGD1_RS13995 7e6f0bfcf205e6341f81caeaec7cea3e 593 Pfam PF16124 RecQ zinc-binding 335 395 3.8E-11 T 22-04-2016 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain SMGD1_RS13995 7e6f0bfcf205e6341f81caeaec7cea3e 593 Gene3D G3DSA:3.40.50.300 6 196 2.3E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS13995 7e6f0bfcf205e6341f81caeaec7cea3e 593 Gene3D G3DSA:1.10.150.80 524 589 6.0E-19 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 SMGD1_RS13995 7e6f0bfcf205e6341f81caeaec7cea3e 593 Pfam PF00270 DEAD/DEAH box helicase 19 179 5.9E-20 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SMGD1_RS13995 7e6f0bfcf205e6341f81caeaec7cea3e 593 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 6 455 1.0E-155 T 22-04-2016 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 SMGD1_RS13995 7e6f0bfcf205e6341f81caeaec7cea3e 593 Pfam PF00570 HRDC domain 523 587 1.3E-20 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 SMGD1_RS13995 7e6f0bfcf205e6341f81caeaec7cea3e 593 Gene3D G3DSA:1.10.10.10 335 503 2.6E-43 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMGD1_RS13995 7e6f0bfcf205e6341f81caeaec7cea3e 593 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 5 590 6.6E-210 T 22-04-2016 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 SMGD1_RS13995 7e6f0bfcf205e6341f81caeaec7cea3e 593 SUPERFAMILY SSF52540 56 340 7.02E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS13995 7e6f0bfcf205e6341f81caeaec7cea3e 593 SMART SM00956 403 504 2.6E-34 T 22-04-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 SMGD1_RS13995 7e6f0bfcf205e6341f81caeaec7cea3e 593 PANTHER PTHR13710:SF81 5 587 2.1E-234 T 22-04-2016 SMGD1_RS13995 7e6f0bfcf205e6341f81caeaec7cea3e 593 Gene3D G3DSA:3.40.50.300 214 334 4.6E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS08835 cb72af260ce0b8357d66ccaa440cba9c 354 Gene3D G3DSA:2.40.50.100 55 90 4.3E-11 T 22-04-2016 SMGD1_RS08835 cb72af260ce0b8357d66ccaa440cba9c 354 Gene3D G3DSA:2.40.50.100 171 207 4.3E-11 T 22-04-2016 SMGD1_RS08835 cb72af260ce0b8357d66ccaa440cba9c 354 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 49 265 2.5E-25 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SMGD1_RS08835 cb72af260ce0b8357d66ccaa440cba9c 354 PANTHER PTHR30097 17 350 6.2E-37 T 22-04-2016 SMGD1_RS08835 cb72af260ce0b8357d66ccaa440cba9c 354 SUPERFAMILY SSF111369 59 269 2.09E-7 T 22-04-2016 SMGD1_RS07020 89c0465271d0ec35088f555eef92e3d2 287 SUPERFAMILY SSF103481 187 285 1.57E-9 T 22-04-2016 SMGD1_RS07020 89c0465271d0ec35088f555eef92e3d2 287 Pfam PF00892 EamA-like transporter family 8 137 2.8E-12 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SMGD1_RS07020 89c0465271d0ec35088f555eef92e3d2 287 Pfam PF00892 EamA-like transporter family 151 284 1.9E-18 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SMGD1_RS07020 89c0465271d0ec35088f555eef92e3d2 287 PANTHER PTHR22911 9 284 6.4E-35 T 22-04-2016 SMGD1_RS07020 89c0465271d0ec35088f555eef92e3d2 287 SUPERFAMILY SSF103481 39 138 1.83E-7 T 22-04-2016 SMGD1_RS02005 6307ded2edbe040482cac24bb84d761a 744 SMART SM00052 489 735 2.2E-116 T 22-04-2016 IPR001633 EAL domain SMGD1_RS02005 6307ded2edbe040482cac24bb84d761a 744 Gene3D G3DSA:3.30.450.20 50 192 4.1E-33 T 22-04-2016 SMGD1_RS02005 6307ded2edbe040482cac24bb84d761a 744 SMART SM00086 258 300 0.005 T 22-04-2016 IPR001610 PAC motif SMGD1_RS02005 6307ded2edbe040482cac24bb84d761a 744 SMART SM00086 137 179 5.6E-8 T 22-04-2016 IPR001610 PAC motif SMGD1_RS02005 6307ded2edbe040482cac24bb84d761a 744 Gene3D G3DSA:3.20.20.450 493 739 3.1E-95 T 22-04-2016 IPR001633 EAL domain SMGD1_RS02005 6307ded2edbe040482cac24bb84d761a 744 SMART SM00091 62 130 6.8E-7 T 22-04-2016 IPR000014 PAS domain SMGD1_RS02005 6307ded2edbe040482cac24bb84d761a 744 SMART SM00091 187 253 7.4E-11 T 22-04-2016 IPR000014 PAS domain SMGD1_RS02005 6307ded2edbe040482cac24bb84d761a 744 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 315 477 6.8E-49 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS02005 6307ded2edbe040482cac24bb84d761a 744 Pfam PF13426 PAS domain 198 299 5.8E-11 T 22-04-2016 IPR000014 PAS domain SMGD1_RS02005 6307ded2edbe040482cac24bb84d761a 744 Pfam PF00563 EAL domain 495 730 3.5E-74 T 22-04-2016 IPR001633 EAL domain SMGD1_RS02005 6307ded2edbe040482cac24bb84d761a 744 SUPERFAMILY SSF55073 323 481 1.41E-51 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS02005 6307ded2edbe040482cac24bb84d761a 744 SUPERFAMILY SSF141868 495 741 1.7E-87 T 22-04-2016 IPR001633 EAL domain SMGD1_RS02005 6307ded2edbe040482cac24bb84d761a 744 SUPERFAMILY SSF55785 71 180 1.17E-22 T 22-04-2016 IPR000014 PAS domain SMGD1_RS02005 6307ded2edbe040482cac24bb84d761a 744 PANTHER PTHR33121:SF13 429 738 1.5E-84 T 22-04-2016 SMGD1_RS02005 6307ded2edbe040482cac24bb84d761a 744 SUPERFAMILY SSF55785 198 307 4.49E-22 T 22-04-2016 IPR000014 PAS domain SMGD1_RS02005 6307ded2edbe040482cac24bb84d761a 744 PANTHER PTHR33121 429 738 1.5E-84 T 22-04-2016 SMGD1_RS02005 6307ded2edbe040482cac24bb84d761a 744 Gene3D G3DSA:3.30.70.270 319 485 3.4E-59 T 22-04-2016 SMGD1_RS02005 6307ded2edbe040482cac24bb84d761a 744 Pfam PF00990 Diguanylate cyclase, GGDEF domain 318 475 2.2E-53 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS02005 6307ded2edbe040482cac24bb84d761a 744 SMART SM00267 307 479 5.6E-69 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS02005 6307ded2edbe040482cac24bb84d761a 744 Pfam PF08447 PAS fold 85 173 2.8E-24 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 SMGD1_RS02005 6307ded2edbe040482cac24bb84d761a 744 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 191 307 1.5E-21 T 22-04-2016 IPR000014 PAS domain SMGD1_RS02005 6307ded2edbe040482cac24bb84d761a 744 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 73 183 5.8E-12 T 22-04-2016 IPR000014 PAS domain SMGD1_RS02005 6307ded2edbe040482cac24bb84d761a 744 Gene3D G3DSA:3.30.450.20 193 303 8.0E-22 T 22-04-2016 SMGD1_RS07440 341e6c7f16955d805ab31b2d06fd8711 1058 Gene3D G3DSA:2.130.10.10 33 163 4.1E-15 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 SMGD1_RS07440 341e6c7f16955d805ab31b2d06fd8711 1058 Gene3D G3DSA:2.130.10.10 223 445 1.9E-24 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 SMGD1_RS07440 341e6c7f16955d805ab31b2d06fd8711 1058 Gene3D G3DSA:2.130.10.10 564 625 1.9E-24 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 SMGD1_RS07440 341e6c7f16955d805ab31b2d06fd8711 1058 SUPERFAMILY SSF82171 298 530 5.49E-8 T 22-04-2016 SMGD1_RS07440 341e6c7f16955d805ab31b2d06fd8711 1058 SUPERFAMILY SSF50998 227 297 4.0E-32 T 22-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily SMGD1_RS07440 341e6c7f16955d805ab31b2d06fd8711 1058 SUPERFAMILY SSF50998 40 186 4.0E-32 T 22-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily SMGD1_RS07440 341e6c7f16955d805ab31b2d06fd8711 1058 SUPERFAMILY SSF50998 527 633 4.0E-32 T 22-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily SMGD1_RS07440 341e6c7f16955d805ab31b2d06fd8711 1058 SUPERFAMILY SSF50998 366 436 4.0E-32 T 22-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily SMGD1_RS07440 341e6c7f16955d805ab31b2d06fd8711 1058 Gene3D G3DSA:3.40.50.1460 806 946 1.2E-13 T 22-04-2016 IPR029030 Caspase-like domain SMGD1_RS07440 341e6c7f16955d805ab31b2d06fd8711 1058 SUPERFAMILY SSF52129 809 1009 2.72E-8 T 22-04-2016 IPR029030 Caspase-like domain SMGD1_RS07440 341e6c7f16955d805ab31b2d06fd8711 1058 Pfam PF00656 Caspase domain 809 1043 2.9E-16 T 22-04-2016 SMGD1_RS10410 0e207cf5b31b3683512eedf98b7565ce 278 Gene3D G3DSA:1.25.40.10 163 254 6.3E-14 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS10410 0e207cf5b31b3683512eedf98b7565ce 278 SUPERFAMILY SSF48452 174 254 3.79E-15 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS10410 0e207cf5b31b3683512eedf98b7565ce 278 SMART SM00028 187 220 2.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMGD1_RS10410 0e207cf5b31b3683512eedf98b7565ce 278 SMART SM00028 221 254 9.1 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMGD1_RS06590 84924122b598d0ab5fe89878fcef5716 273 SUPERFAMILY SSF82689 172 268 3.92E-32 T 22-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 SMGD1_RS06590 84924122b598d0ab5fe89878fcef5716 273 SUPERFAMILY SSF50182 104 170 5.56E-17 T 22-04-2016 IPR010920 LSM domain SMGD1_RS06590 84924122b598d0ab5fe89878fcef5716 273 Gene3D G3DSA:2.30.30.60 120 169 1.6E-18 T 22-04-2016 SMGD1_RS06590 84924122b598d0ab5fe89878fcef5716 273 Gene3D G3DSA:3.30.70.100 174 257 1.0E-26 T 22-04-2016 SMGD1_RS06590 84924122b598d0ab5fe89878fcef5716 273 PANTHER PTHR30221 4 272 1.0E-85 T 22-04-2016 SMGD1_RS06590 84924122b598d0ab5fe89878fcef5716 273 SUPERFAMILY SSF82861 18 103 2.62E-19 T 22-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 SMGD1_RS06590 84924122b598d0ab5fe89878fcef5716 273 PANTHER PTHR30221:SF7 4 272 1.0E-85 T 22-04-2016 SMGD1_RS06590 84924122b598d0ab5fe89878fcef5716 273 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 134 168 - T 22-04-2016 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 SMGD1_RS06590 84924122b598d0ab5fe89878fcef5716 273 Pfam PF00924 Mechanosensitive ion channel 62 259 8.3E-55 T 22-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 SMGD1_RS02440 9331af9c4ffbc3f88dfbb42f9c8864b1 408 PANTHER PTHR10108 59 217 9.4E-12 T 22-04-2016 SMGD1_RS02440 9331af9c4ffbc3f88dfbb42f9c8864b1 408 Pfam PF13489 Methyltransferase domain 82 237 2.9E-16 T 22-04-2016 SMGD1_RS02440 9331af9c4ffbc3f88dfbb42f9c8864b1 408 Pfam PF08484 C-methyltransferase C-terminal domain 244 401 4.3E-56 T 22-04-2016 IPR013691 C-methyltransferase KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.-|UniPathway: UPA00853 SMGD1_RS02440 9331af9c4ffbc3f88dfbb42f9c8864b1 408 Gene3D G3DSA:3.40.50.150 85 268 4.5E-26 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS02440 9331af9c4ffbc3f88dfbb42f9c8864b1 408 SUPERFAMILY SSF53335 67 251 4.95E-23 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS02440 9331af9c4ffbc3f88dfbb42f9c8864b1 408 Pfam PF08421 Putative zinc binding domain 4 63 3.3E-17 T 22-04-2016 IPR013630 Methyltransferase putative zinc binding domain KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.-|UniPathway: UPA00853 SMGD1_RS03545 f3e03bdef9a07ac53030374e0e00e43e 168 Pfam PF02630 SCO1/SenC 31 137 8.0E-11 T 22-04-2016 IPR003782 Copper chaperone SCO1/SenC SMGD1_RS03545 f3e03bdef9a07ac53030374e0e00e43e 168 SUPERFAMILY SSF52833 32 165 5.14E-15 T 22-04-2016 IPR012336 Thioredoxin-like fold SMGD1_RS03545 f3e03bdef9a07ac53030374e0e00e43e 168 Gene3D G3DSA:3.40.30.10 33 167 2.7E-18 T 22-04-2016 IPR012336 Thioredoxin-like fold SMGD1_RS03065 11f50cfcfb54e343ca6bac5126356e08 1047 Gene3D G3DSA:3.30.70.1430 43 139 2.5E-22 T 22-04-2016 SMGD1_RS03065 11f50cfcfb54e343ca6bac5126356e08 1047 Gene3D G3DSA:1.20.1640.10 304 508 4.1E-51 T 22-04-2016 SMGD1_RS03065 11f50cfcfb54e343ca6bac5126356e08 1047 SUPERFAMILY SSF82866 297 496 8.63E-40 T 22-04-2016 SMGD1_RS03065 11f50cfcfb54e343ca6bac5126356e08 1047 PANTHER PTHR32063 1 1047 2.5E-234 T 22-04-2016 SMGD1_RS03065 11f50cfcfb54e343ca6bac5126356e08 1047 SUPERFAMILY SSF82866 806 1038 3.01E-45 T 22-04-2016 SMGD1_RS03065 11f50cfcfb54e343ca6bac5126356e08 1047 SUPERFAMILY SSF82693 141 183 2.41E-8 T 22-04-2016 SMGD1_RS03065 11f50cfcfb54e343ca6bac5126356e08 1047 Gene3D G3DSA:3.30.70.1320 275 303 8.0E-6 T 22-04-2016 SMGD1_RS03065 11f50cfcfb54e343ca6bac5126356e08 1047 Gene3D G3DSA:3.30.70.1320 145 180 8.0E-6 T 22-04-2016 SMGD1_RS03065 11f50cfcfb54e343ca6bac5126356e08 1047 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 5.4E-42 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMGD1_RS03065 11f50cfcfb54e343ca6bac5126356e08 1047 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 5.4E-42 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMGD1_RS03065 11f50cfcfb54e343ca6bac5126356e08 1047 PRINTS PR00702 Acriflavin resistance protein family signature 337 360 5.4E-42 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMGD1_RS03065 11f50cfcfb54e343ca6bac5126356e08 1047 PRINTS PR00702 Acriflavin resistance protein family signature 364 385 5.4E-42 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMGD1_RS03065 11f50cfcfb54e343ca6bac5126356e08 1047 PRINTS PR00702 Acriflavin resistance protein family signature 392 416 5.4E-42 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMGD1_RS03065 11f50cfcfb54e343ca6bac5126356e08 1047 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 5.4E-42 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMGD1_RS03065 11f50cfcfb54e343ca6bac5126356e08 1047 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 5.4E-42 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMGD1_RS03065 11f50cfcfb54e343ca6bac5126356e08 1047 SUPERFAMILY SSF82693 271 330 2.41E-8 T 22-04-2016 SMGD1_RS03065 11f50cfcfb54e343ca6bac5126356e08 1047 Gene3D G3DSA:1.10.3850.10 812 1037 6.0E-56 T 22-04-2016 SMGD1_RS03065 11f50cfcfb54e343ca6bac5126356e08 1047 PANTHER PTHR32063:SF0 1 1047 2.5E-234 T 22-04-2016 SMGD1_RS03065 11f50cfcfb54e343ca6bac5126356e08 1047 SUPERFAMILY SSF82693 43 129 8.63E-20 T 22-04-2016 SMGD1_RS03065 11f50cfcfb54e343ca6bac5126356e08 1047 SUPERFAMILY SSF82714 185 268 1.57E-15 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMGD1_RS03065 11f50cfcfb54e343ca6bac5126356e08 1047 Gene3D G3DSA:3.30.2090.10 185 268 8.1E-17 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMGD1_RS03065 11f50cfcfb54e343ca6bac5126356e08 1047 Pfam PF00873 AcrB/AcrD/AcrF family 4 1035 3.0E-193 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMGD1_RS12435 8003a3f8526b10090f286d16752bd68b 430 PANTHER PTHR24095:SF175 54 430 2.7E-112 T 22-04-2016 SMGD1_RS12435 8003a3f8526b10090f286d16752bd68b 430 PANTHER PTHR24095 54 430 2.7E-112 T 22-04-2016 SMGD1_RS12435 8003a3f8526b10090f286d16752bd68b 430 Gene3D G3DSA:3.30.300.30 323 429 8.9E-34 T 22-04-2016 SMGD1_RS12435 8003a3f8526b10090f286d16752bd68b 430 Gene3D G3DSA:3.40.50.980 85 240 2.2E-13 T 22-04-2016 SMGD1_RS12435 8003a3f8526b10090f286d16752bd68b 430 SUPERFAMILY SSF56801 20 397 2.22E-57 T 22-04-2016 SMGD1_RS12435 8003a3f8526b10090f286d16752bd68b 430 PIRSF PIRSF006444 1 430 6.0E-196 T 22-04-2016 IPR011880 Phenylacetate-CoA ligase GO:0010124|GO:0047475 KEGG: 00360+6.2.1.30|MetaCyc: PWY-1341|MetaCyc: PWY-6318|MetaCyc: PWY-7716|UniPathway: UPA00930 SMGD1_RS12435 8003a3f8526b10090f286d16752bd68b 430 Pfam PF14535 AMP-binding enzyme C-terminal domain 333 429 2.1E-28 T 22-04-2016 IPR028154 AMP-dependent ligase, C-terminal SMGD1_RS12435 8003a3f8526b10090f286d16752bd68b 430 Pfam PF00501 AMP-binding enzyme 87 331 6.0E-16 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 SMGD1_RS13145 6457bf5d49c569cd8fffed142b20be99 708 Pfam PF00400 WD domain, G-beta repeat 97 120 0.056 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS13145 6457bf5d49c569cd8fffed142b20be99 708 Pfam PF00400 WD domain, G-beta repeat 135 168 5.9E-5 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS13145 6457bf5d49c569cd8fffed142b20be99 708 SUPERFAMILY SSF50978 4 295 3.11E-42 T 22-04-2016 IPR017986 WD40-repeat-containing domain GO:0005515 SMGD1_RS13145 6457bf5d49c569cd8fffed142b20be99 708 PANTHER PTHR22847 40 293 8.6E-29 T 22-04-2016 SMGD1_RS13145 6457bf5d49c569cd8fffed142b20be99 708 PANTHER PTHR22847 11 23 8.6E-29 T 22-04-2016 SMGD1_RS13145 6457bf5d49c569cd8fffed142b20be99 708 Gene3D G3DSA:2.130.10.10 10 301 3.0E-45 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 SMGD1_RS13145 6457bf5d49c569cd8fffed142b20be99 708 SMART SM00320 212 251 6.4 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS13145 6457bf5d49c569cd8fffed142b20be99 708 SMART SM00320 171 209 1.7 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS13145 6457bf5d49c569cd8fffed142b20be99 708 SMART SM00320 129 168 4.3E-7 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS13145 6457bf5d49c569cd8fffed142b20be99 708 SMART SM00320 259 294 270.0 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS13145 6457bf5d49c569cd8fffed142b20be99 708 SMART SM00320 87 126 0.011 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS11290 078c42aedfb92d0092dd652537ca1110 322 SUPERFAMILY SSF46785 261 315 3.11E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMGD1_RS11290 078c42aedfb92d0092dd652537ca1110 322 Gene3D G3DSA:1.10.10.10 261 310 2.1E-7 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMGD1_RS11290 078c42aedfb92d0092dd652537ca1110 322 SUPERFAMILY SSF140931 80 253 1.44E-40 T 22-04-2016 IPR003812 Fido domain SMGD1_RS11290 078c42aedfb92d0092dd652537ca1110 322 Gene3D G3DSA:1.10.3290.10 15 254 9.6E-56 T 22-04-2016 IPR003812 Fido domain SMGD1_RS11290 078c42aedfb92d0092dd652537ca1110 322 PANTHER PTHR13504 5 250 2.8E-45 T 22-04-2016 SMGD1_RS11290 078c42aedfb92d0092dd652537ca1110 322 Pfam PF13412 Winged helix-turn-helix DNA-binding 262 308 1.8E-5 T 22-04-2016 SMGD1_RS11290 078c42aedfb92d0092dd652537ca1110 322 Pfam PF02661 Fic/DOC family 100 196 5.7E-25 T 22-04-2016 IPR003812 Fido domain SMGD1_RS08830 ffcf6aab0cd3f3285410bcccf0b59f91 395 Gene3D G3DSA:1.20.1600.10 69 194 1.1E-4 T 22-04-2016 SMGD1_RS08830 ffcf6aab0cd3f3285410bcccf0b59f91 395 Gene3D G3DSA:1.20.1600.10 243 385 3.4E-5 T 22-04-2016 SMGD1_RS08830 ffcf6aab0cd3f3285410bcccf0b59f91 395 SUPERFAMILY SSF56954 58 385 3.53E-17 T 22-04-2016 SMGD1_RS08830 ffcf6aab0cd3f3285410bcccf0b59f91 395 Pfam PF02321 Outer membrane efflux protein 27 186 1.1E-6 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SMGD1_RS00695 be8228e99dd436737cfdbef74b236e71 334 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 17 83 4.9E-13 T 22-04-2016 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 SMGD1_RS00695 be8228e99dd436737cfdbef74b236e71 334 PANTHER PTHR11538 98 333 1.8E-89 T 22-04-2016 SMGD1_RS00695 be8228e99dd436737cfdbef74b236e71 334 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 5 333 44.831 T 22-04-2016 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 SMGD1_RS00695 be8228e99dd436737cfdbef74b236e71 334 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 40 333 1.1E-98 T 22-04-2016 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 SMGD1_RS00695 be8228e99dd436737cfdbef74b236e71 334 SUPERFAMILY SSF46589 11 94 2.46E-13 T 22-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 SMGD1_RS00695 be8228e99dd436737cfdbef74b236e71 334 SUPERFAMILY SSF55681 89 333 1.14E-71 T 22-04-2016 SMGD1_RS00695 be8228e99dd436737cfdbef74b236e71 334 Gene3D G3DSA:3.30.930.10 7 334 6.8E-114 T 22-04-2016 SMGD1_RS00695 be8228e99dd436737cfdbef74b236e71 334 Pfam PF01409 tRNA synthetases class II core domain (F) 89 333 2.1E-95 T 22-04-2016 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 SMGD1_RS04350 feacf25a4a67dc9780ced756816844f6 461 Gene3D G3DSA:3.30.43.10 4 96 1.2E-33 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 SMGD1_RS04350 feacf25a4a67dc9780ced756816844f6 461 Pfam PF01565 FAD binding domain 40 179 2.2E-41 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 SMGD1_RS04350 feacf25a4a67dc9780ced756816844f6 461 SUPERFAMILY SSF55103 220 459 7.36E-70 T 22-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 SMGD1_RS04350 feacf25a4a67dc9780ced756816844f6 461 Gene3D G3DSA:3.30.465.10 97 217 8.5E-40 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 SMGD1_RS04350 feacf25a4a67dc9780ced756816844f6 461 PANTHER PTHR11748:SF85 1 458 1.6E-174 T 22-04-2016 SMGD1_RS04350 feacf25a4a67dc9780ced756816844f6 461 SUPERFAMILY SSF56176 5 217 1.73E-70 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 SMGD1_RS04350 feacf25a4a67dc9780ced756816844f6 461 PANTHER PTHR11748 1 458 1.6E-174 T 22-04-2016 SMGD1_RS04350 feacf25a4a67dc9780ced756816844f6 461 Gene3D G3DSA:1.10.45.10 419 460 1.5E-15 T 22-04-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 SMGD1_RS04350 feacf25a4a67dc9780ced756816844f6 461 Pfam PF02913 FAD linked oxidases, C-terminal domain 216 457 8.3E-68 T 22-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 SMGD1_RS02395 6243741aaf9d861bbcac26d6ee4b0594 191 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 185 3.0E-58 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 SMGD1_RS02395 6243741aaf9d861bbcac26d6ee4b0594 191 PANTHER PTHR21047 1 177 1.2E-73 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 SMGD1_RS02395 6243741aaf9d861bbcac26d6ee4b0594 191 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 3 177 9.7E-69 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 SMGD1_RS02395 6243741aaf9d861bbcac26d6ee4b0594 191 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 7 177 1.2E-69 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 SMGD1_RS02395 6243741aaf9d861bbcac26d6ee4b0594 191 SUPERFAMILY SSF51182 1 184 5.78E-72 T 22-04-2016 IPR011051 RmlC-like cupin domain SMGD1_RS02395 6243741aaf9d861bbcac26d6ee4b0594 191 Gene3D G3DSA:2.60.120.10 1 184 4.1E-77 T 22-04-2016 IPR014710 RmlC-like jelly roll fold SMGD1_RS05825 560173f8ed9d52630a70d8c4dea18e22 411 SUPERFAMILY SSF46626 100 231 4.8E-18 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS05825 560173f8ed9d52630a70d8c4dea18e22 411 Pfam PF00034 Cytochrome c 121 220 4.2E-8 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS05825 560173f8ed9d52630a70d8c4dea18e22 411 Gene3D G3DSA:1.10.760.10 15 30 2.5E-17 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS05825 560173f8ed9d52630a70d8c4dea18e22 411 Gene3D G3DSA:1.10.760.10 114 244 2.5E-17 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS05825 560173f8ed9d52630a70d8c4dea18e22 411 Gene3D G3DSA:1.10.760.10 330 406 1.5E-21 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS05825 560173f8ed9d52630a70d8c4dea18e22 411 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 330 404 2.8E-10 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS05825 560173f8ed9d52630a70d8c4dea18e22 411 PRINTS PR00607 Class IE cytochrome C signature 351 361 3.1E-8 T 22-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 SMGD1_RS05825 560173f8ed9d52630a70d8c4dea18e22 411 PRINTS PR00607 Class IE cytochrome C signature 394 405 3.1E-8 T 22-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 SMGD1_RS05825 560173f8ed9d52630a70d8c4dea18e22 411 PRINTS PR00607 Class IE cytochrome C signature 340 351 3.1E-8 T 22-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 SMGD1_RS05825 560173f8ed9d52630a70d8c4dea18e22 411 PRINTS PR00607 Class IE cytochrome C signature 379 391 3.1E-8 T 22-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 SMGD1_RS05825 560173f8ed9d52630a70d8c4dea18e22 411 PANTHER PTHR40942 333 409 1.3E-16 T 22-04-2016 SMGD1_RS05825 560173f8ed9d52630a70d8c4dea18e22 411 SUPERFAMILY SSF46626 330 405 1.4E-11 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS08525 12b2fceef048cd24e61d6614e61285e6 156 Gene3D G3DSA:3.40.30.10 1 154 4.1E-50 T 22-04-2016 IPR012336 Thioredoxin-like fold SMGD1_RS08525 12b2fceef048cd24e61d6614e61285e6 156 Pfam PF00578 AhpC/TSA family 4 132 9.7E-38 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 SMGD1_RS08525 12b2fceef048cd24e61d6614e61285e6 156 PIRSF PIRSF000239 1 155 8.0E-26 T 22-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 SMGD1_RS08525 12b2fceef048cd24e61d6614e61285e6 156 SUPERFAMILY SSF52833 1 154 9.12E-50 T 22-04-2016 IPR012336 Thioredoxin-like fold SMGD1_RS08525 12b2fceef048cd24e61d6614e61285e6 156 PANTHER PTHR10681 1 131 1.6E-45 T 22-04-2016 SMGD1_RS10910 8ad1c797d8ca025757b6e4228118be4b 879 SUPERFAMILY SSF52156 657 787 4.18E-34 T 22-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 SMGD1_RS10910 8ad1c797d8ca025757b6e4228118be4b 879 Pfam PF00009 Elongation factor Tu GTP binding domain 383 539 4.7E-35 T 22-04-2016 SMGD1_RS10910 8ad1c797d8ca025757b6e4228118be4b 879 PANTHER PTHR23115:SF184 364 707 3.6E-180 T 22-04-2016 SMGD1_RS10910 8ad1c797d8ca025757b6e4228118be4b 879 PANTHER PTHR23115:SF184 733 868 3.6E-180 T 22-04-2016 SMGD1_RS10910 8ad1c797d8ca025757b6e4228118be4b 879 Gene3D G3DSA:3.40.50.10050 680 759 4.2E-23 T 22-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 SMGD1_RS10910 8ad1c797d8ca025757b6e4228118be4b 879 Gene3D G3DSA:2.40.30.10 552 643 7.7E-18 T 22-04-2016 SMGD1_RS10910 8ad1c797d8ca025757b6e4228118be4b 879 Gene3D G3DSA:3.40.50.300 368 538 1.5E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS10910 8ad1c797d8ca025757b6e4228118be4b 879 Gene3D G3DSA:2.40.30.10 783 876 1.5E-32 T 22-04-2016 SMGD1_RS10910 8ad1c797d8ca025757b6e4228118be4b 879 SUPERFAMILY SSF50447 553 633 9.62E-21 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain SMGD1_RS10910 8ad1c797d8ca025757b6e4228118be4b 879 SUPERFAMILY SSF52540 369 552 5.1E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS10910 8ad1c797d8ca025757b6e4228118be4b 879 ProSitePatterns PS01176 Initiation factor 2 signature. 830 852 - T 22-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 SMGD1_RS10910 8ad1c797d8ca025757b6e4228118be4b 879 Pfam PF11987 Translation-initiation factor 2 665 769 9.1E-35 T 22-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 SMGD1_RS10910 8ad1c797d8ca025757b6e4228118be4b 879 PANTHER PTHR23115 364 707 3.6E-180 T 22-04-2016 SMGD1_RS10910 8ad1c797d8ca025757b6e4228118be4b 879 PANTHER PTHR23115 733 868 3.6E-180 T 22-04-2016 SMGD1_RS10910 8ad1c797d8ca025757b6e4228118be4b 879 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 4 877 15.877 T 22-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 SMGD1_RS10910 8ad1c797d8ca025757b6e4228118be4b 879 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 298 878 1.6E-237 T 22-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 SMGD1_RS10910 8ad1c797d8ca025757b6e4228118be4b 879 SUPERFAMILY SSF50447 782 875 1.45E-27 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain SMGD1_RS10910 8ad1c797d8ca025757b6e4228118be4b 879 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 382 538 3.4E-31 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SMGD1_RS10910 8ad1c797d8ca025757b6e4228118be4b 879 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 3 48 1.6E-13 T 22-04-2016 IPR006847 Translation initiation factor IF-2, N-terminal SMGD1_RS10910 8ad1c797d8ca025757b6e4228118be4b 879 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 303 354 1.6E-10 T 22-04-2016 IPR006847 Translation initiation factor IF-2, N-terminal SMGD1_RS10515 7ea0c9e82c616ac65e2f686b07dd1f89 296 Gene3D G3DSA:3.30.565.10 121 266 2.6E-26 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS10515 7ea0c9e82c616ac65e2f686b07dd1f89 296 SUPERFAMILY SSF47384 35 115 1.51E-5 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS10515 7ea0c9e82c616ac65e2f686b07dd1f89 296 SMART SM00387 159 270 6.5E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS10515 7ea0c9e82c616ac65e2f686b07dd1f89 296 PRINTS PR00344 Bacterial sensor protein C-terminal signature 196 210 1.3E-5 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS10515 7ea0c9e82c616ac65e2f686b07dd1f89 296 PRINTS PR00344 Bacterial sensor protein C-terminal signature 231 249 1.3E-5 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS10515 7ea0c9e82c616ac65e2f686b07dd1f89 296 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 160 266 3.4E-13 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS10515 7ea0c9e82c616ac65e2f686b07dd1f89 296 SUPERFAMILY SSF55874 104 266 1.44E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS10515 7ea0c9e82c616ac65e2f686b07dd1f89 296 PANTHER PTHR24423 26 266 5.3E-32 T 22-04-2016 SMGD1_RS09240 892044639bad03d9fa6aa5e45f7bcb9e 778 SUPERFAMILY SSF48452 384 477 2.2E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS09240 892044639bad03d9fa6aa5e45f7bcb9e 778 SUPERFAMILY SSF48452 89 163 1.98E-11 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS09240 892044639bad03d9fa6aa5e45f7bcb9e 778 SUPERFAMILY SSF48452 427 477 1.98E-11 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS09240 892044639bad03d9fa6aa5e45f7bcb9e 778 SMART SM00028 444 477 0.2 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMGD1_RS09240 892044639bad03d9fa6aa5e45f7bcb9e 778 SMART SM00028 257 290 280.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMGD1_RS09240 892044639bad03d9fa6aa5e45f7bcb9e 778 SMART SM00028 124 157 1.1 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMGD1_RS09240 892044639bad03d9fa6aa5e45f7bcb9e 778 Gene3D G3DSA:1.25.40.10 88 219 2.8E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS09240 892044639bad03d9fa6aa5e45f7bcb9e 778 Gene3D G3DSA:1.25.40.10 261 324 1.6E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS09240 892044639bad03d9fa6aa5e45f7bcb9e 778 Gene3D G3DSA:1.25.40.10 428 477 1.6E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS09240 892044639bad03d9fa6aa5e45f7bcb9e 778 SUPERFAMILY SSF48452 655 749 2.2E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS09240 892044639bad03d9fa6aa5e45f7bcb9e 778 SUPERFAMILY SSF48452 263 293 1.98E-11 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS01075 d19f3551d685c1525df930be4b17c39c 751 PRINTS PR00344 Bacterial sensor protein C-terminal signature 709 727 4.7E-5 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS01075 d19f3551d685c1525df930be4b17c39c 751 PRINTS PR00344 Bacterial sensor protein C-terminal signature 680 694 4.7E-5 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS01075 d19f3551d685c1525df930be4b17c39c 751 Gene3D G3DSA:3.30.565.10 600 744 4.8E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS01075 d19f3551d685c1525df930be4b17c39c 751 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 643 744 4.6E-11 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS01075 d19f3551d685c1525df930be4b17c39c 751 Gene3D G3DSA:3.30.450.20 212 293 1.9E-22 T 22-04-2016 SMGD1_RS01075 d19f3551d685c1525df930be4b17c39c 751 Gene3D G3DSA:3.30.450.20 327 375 1.9E-22 T 22-04-2016 SMGD1_RS01075 d19f3551d685c1525df930be4b17c39c 751 SMART SM00387 638 750 5.8E-12 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS01075 d19f3551d685c1525df930be4b17c39c 751 Pfam PF02743 Cache domain 143 360 3.1E-12 T 22-04-2016 IPR033479 Double Cache domain 1 SMGD1_RS01075 d19f3551d685c1525df930be4b17c39c 751 PANTHER PTHR24423 224 247 1.0E-11 T 22-04-2016 SMGD1_RS01075 d19f3551d685c1525df930be4b17c39c 751 PANTHER PTHR24423 441 482 1.0E-11 T 22-04-2016 SMGD1_RS01075 d19f3551d685c1525df930be4b17c39c 751 PANTHER PTHR24423 557 746 1.0E-11 T 22-04-2016 SMGD1_RS01075 d19f3551d685c1525df930be4b17c39c 751 SUPERFAMILY SSF55874 598 745 1.57E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS00235 546399592e5681ba2430b3ffda1aeaaf 364 Gene3D G3DSA:3.40.640.10 16 244 6.8E-89 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SMGD1_RS00235 546399592e5681ba2430b3ffda1aeaaf 364 PANTHER PTHR30244:SF15 1 362 8.9E-138 T 22-04-2016 SMGD1_RS00235 546399592e5681ba2430b3ffda1aeaaf 364 PIRSF PIRSF000390 1 363 7.7E-108 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase SMGD1_RS00235 546399592e5681ba2430b3ffda1aeaaf 364 SUPERFAMILY SSF53383 11 362 3.19E-116 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SMGD1_RS00235 546399592e5681ba2430b3ffda1aeaaf 364 Gene3D G3DSA:3.90.1150.10 247 362 1.8E-32 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SMGD1_RS00235 546399592e5681ba2430b3ffda1aeaaf 364 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 16 361 1.5E-122 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase SMGD1_RS00235 546399592e5681ba2430b3ffda1aeaaf 364 PANTHER PTHR30244 1 362 8.9E-138 T 22-04-2016 SMGD1_RS12385 191c6685afaf5b551fec2cf17cf0f981 350 PANTHER PTHR22939:SF78 125 350 7.3E-56 T 22-04-2016 SMGD1_RS12385 191c6685afaf5b551fec2cf17cf0f981 350 Pfam PF02163 Peptidase family M50 7 335 2.5E-74 T 22-04-2016 IPR008915 Peptidase M50 GO:0004222|GO:0006508 SMGD1_RS12385 191c6685afaf5b551fec2cf17cf0f981 350 PANTHER PTHR22939 125 350 7.3E-56 T 22-04-2016 SMGD1_RS12385 191c6685afaf5b551fec2cf17cf0f981 350 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 123 175 3.2E-7 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SMGD1_RS12385 191c6685afaf5b551fec2cf17cf0f981 350 SUPERFAMILY SSF50156 83 188 3.15E-17 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SMGD1_RS12385 191c6685afaf5b551fec2cf17cf0f981 350 SMART SM00228 110 179 6.4E-8 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SMGD1_RS12385 191c6685afaf5b551fec2cf17cf0f981 350 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 123 349 5.2E-47 T 22-04-2016 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 SMGD1_RS12385 191c6685afaf5b551fec2cf17cf0f981 350 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 2 178 2.1E-54 T 22-04-2016 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 SMGD1_RS12385 191c6685afaf5b551fec2cf17cf0f981 350 Gene3D G3DSA:2.30.42.10 89 188 1.1E-20 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SMGD1_RS04395 66b6a1668985b4616a1ba874d16feab6 102 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 5 102 15.788 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 SMGD1_RS04395 66b6a1668985b4616a1ba874d16feab6 102 Pfam PF02049 Flagellar hook-basal body complex protein FliE 20 101 1.9E-22 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 SMGD1_RS04395 66b6a1668985b4616a1ba874d16feab6 102 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 87 100 9.1E-11 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 SMGD1_RS04395 66b6a1668985b4616a1ba874d16feab6 102 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 66 82 9.1E-11 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 SMGD1_RS04395 66b6a1668985b4616a1ba874d16feab6 102 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 32 48 9.1E-11 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 SMGD1_RS04395 66b6a1668985b4616a1ba874d16feab6 102 PANTHER PTHR34653 24 102 5.8E-14 T 22-04-2016 SMGD1_RS04395 66b6a1668985b4616a1ba874d16feab6 102 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 18 101 4.6E-24 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 SMGD1_RS00860 3f17711ef051d73a60c15ccdc6b0be0a 448 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 444 4.1E-185 T 22-04-2016 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 SMGD1_RS00860 3f17711ef051d73a60c15ccdc6b0be0a 448 SMART SM00382 88 242 2.8E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain SMGD1_RS00860 3f17711ef051d73a60c15ccdc6b0be0a 448 Gene3D G3DSA:3.40.50.300 58 274 8.1E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS00860 3f17711ef051d73a60c15ccdc6b0be0a 448 Pfam PF13541 Subunit ChlI of Mg-chelatase 351 425 3.2E-7 T 22-04-2016 SMGD1_RS00860 3f17711ef051d73a60c15ccdc6b0be0a 448 SUPERFAMILY SSF52540 52 269 7.4E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS00860 3f17711ef051d73a60c15ccdc6b0be0a 448 PRINTS PR01874 DNA repair protein radA signature 211 239 9.6E-88 T 22-04-2016 SMGD1_RS00860 3f17711ef051d73a60c15ccdc6b0be0a 448 PRINTS PR01874 DNA repair protein radA signature 172 196 9.6E-88 T 22-04-2016 SMGD1_RS00860 3f17711ef051d73a60c15ccdc6b0be0a 448 PRINTS PR01874 DNA repair protein radA signature 246 272 9.6E-88 T 22-04-2016 SMGD1_RS00860 3f17711ef051d73a60c15ccdc6b0be0a 448 PRINTS PR01874 DNA repair protein radA signature 10 34 9.6E-88 T 22-04-2016 SMGD1_RS00860 3f17711ef051d73a60c15ccdc6b0be0a 448 PRINTS PR01874 DNA repair protein radA signature 319 342 9.6E-88 T 22-04-2016 SMGD1_RS00860 3f17711ef051d73a60c15ccdc6b0be0a 448 PRINTS PR01874 DNA repair protein radA signature 80 108 9.6E-88 T 22-04-2016 SMGD1_RS00860 3f17711ef051d73a60c15ccdc6b0be0a 448 PRINTS PR01874 DNA repair protein radA signature 122 139 9.6E-88 T 22-04-2016 SMGD1_RS00860 3f17711ef051d73a60c15ccdc6b0be0a 448 Pfam PF13481 AAA domain 67 220 1.6E-15 T 22-04-2016 SMGD1_RS00860 3f17711ef051d73a60c15ccdc6b0be0a 448 PANTHER PTHR32472 1 413 4.5E-173 T 22-04-2016 SMGD1_RS00860 3f17711ef051d73a60c15ccdc6b0be0a 448 PANTHER PTHR32472:SF10 1 413 4.5E-173 T 22-04-2016 SMGD1_RS00860 3f17711ef051d73a60c15ccdc6b0be0a 448 SUPERFAMILY SSF54211 300 447 1.86E-30 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SMGD1_RS00860 3f17711ef051d73a60c15ccdc6b0be0a 448 SUPERFAMILY SSF54211 253 267 1.86E-30 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SMGD1_RS00860 3f17711ef051d73a60c15ccdc6b0be0a 448 Gene3D G3DSA:3.30.230.10 285 447 2.5E-27 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SMGD1_RS09230 58c0625fbd03edbea91b597f5cc5063c 210 PANTHER PTHR35809 1 209 1.2E-19 T 22-04-2016 SMGD1_RS13685 4b53d08a4e49bdd6aeb9b0de06fb817a 194 Pfam PF00990 Diguanylate cyclase, GGDEF domain 46 188 5.3E-18 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS13685 4b53d08a4e49bdd6aeb9b0de06fb817a 194 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 44 188 1.1E-14 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS13685 4b53d08a4e49bdd6aeb9b0de06fb817a 194 SMART SM00267 35 194 2.4E-5 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS13685 4b53d08a4e49bdd6aeb9b0de06fb817a 194 Gene3D G3DSA:3.30.70.270 47 188 9.8E-18 T 22-04-2016 SMGD1_RS13685 4b53d08a4e49bdd6aeb9b0de06fb817a 194 SUPERFAMILY SSF55073 52 188 2.82E-15 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS01930 f65c3877e7bb0e29d59dcc042faf54b7 399 Pfam PF00579 tRNA synthetases class I (W and Y) 34 320 3.1E-76 T 22-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMGD1_RS01930 f65c3877e7bb0e29d59dcc042faf54b7 399 Gene3D G3DSA:3.10.290.10 331 397 1.0E-24 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SMGD1_RS01930 f65c3877e7bb0e29d59dcc042faf54b7 399 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 6 398 1.0E-121 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 SMGD1_RS01930 f65c3877e7bb0e29d59dcc042faf54b7 399 Gene3D G3DSA:1.10.240.10 231 330 2.0E-35 T 22-04-2016 SMGD1_RS01930 f65c3877e7bb0e29d59dcc042faf54b7 399 SUPERFAMILY SSF52374 3 318 5.63E-84 T 22-04-2016 SMGD1_RS01930 f65c3877e7bb0e29d59dcc042faf54b7 399 Gene3D G3DSA:3.40.50.620 10 230 7.6E-76 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMGD1_RS01930 f65c3877e7bb0e29d59dcc042faf54b7 399 SMART SM00363 338 399 0.0012 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SMGD1_RS01930 f65c3877e7bb0e29d59dcc042faf54b7 399 PANTHER PTHR11766 2 399 2.1E-190 T 22-04-2016 IPR024088 Tyrosine-tRNA ligase, bacterial-type GO:0004831 KEGG: 00970+6.1.1.1 SMGD1_RS01930 f65c3877e7bb0e29d59dcc042faf54b7 399 PANTHER PTHR11766:SF1 2 399 2.1E-190 T 22-04-2016 SMGD1_RS01930 f65c3877e7bb0e29d59dcc042faf54b7 399 Pfam PF01479 S4 domain 349 382 7.0E-6 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SMGD1_RS01930 f65c3877e7bb0e29d59dcc042faf54b7 399 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 44 54 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMGD1_RS01930 f65c3877e7bb0e29d59dcc042faf54b7 399 SUPERFAMILY SSF55174 301 398 6.41E-18 T 22-04-2016 SMGD1_RS01930 f65c3877e7bb0e29d59dcc042faf54b7 399 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 163 178 1.4E-23 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 SMGD1_RS01930 f65c3877e7bb0e29d59dcc042faf54b7 399 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 48 70 1.4E-23 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 SMGD1_RS01930 f65c3877e7bb0e29d59dcc042faf54b7 399 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 180 202 1.4E-23 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 SMGD1_RS01930 f65c3877e7bb0e29d59dcc042faf54b7 399 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 214 226 1.4E-23 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 SMGD1_RS01930 f65c3877e7bb0e29d59dcc042faf54b7 399 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 1 398 43.505 T 22-04-2016 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 SMGD1_RS08315 6f53a0843b830e1f64956d729fd48d80 464 SUPERFAMILY SSF109604 267 436 2.32E-34 T 22-04-2016 SMGD1_RS08315 6f53a0843b830e1f64956d729fd48d80 464 Gene3D G3DSA:1.10.3210.10 259 435 7.6E-21 T 22-04-2016 IPR006674 HD domain SMGD1_RS08315 6f53a0843b830e1f64956d729fd48d80 464 Gene3D G3DSA:3.40.50.2300 1 111 2.2E-10 T 22-04-2016 SMGD1_RS08315 6f53a0843b830e1f64956d729fd48d80 464 SUPERFAMILY SSF52172 1 112 2.42E-11 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS08315 6f53a0843b830e1f64956d729fd48d80 464 SUPERFAMILY SSF52172 121 264 7.68E-36 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS08315 6f53a0843b830e1f64956d729fd48d80 464 SMART SM00448 2 111 0.077 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS08315 6f53a0843b830e1f64956d729fd48d80 464 SMART SM00448 123 237 3.9E-33 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS08315 6f53a0843b830e1f64956d729fd48d80 464 Pfam PF00072 Response regulator receiver domain 125 237 9.5E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS08315 6f53a0843b830e1f64956d729fd48d80 464 Pfam PF00072 Response regulator receiver domain 5 102 5.2E-6 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS08315 6f53a0843b830e1f64956d729fd48d80 464 Gene3D G3DSA:3.40.50.2300 120 242 5.5E-36 T 22-04-2016 SMGD1_RS08315 6f53a0843b830e1f64956d729fd48d80 464 Pfam PF13487 HD domain 324 390 3.2E-19 T 22-04-2016 SMGD1_RS08315 6f53a0843b830e1f64956d729fd48d80 464 PANTHER PTHR26402 123 237 5.6E-38 T 22-04-2016 SMGD1_RS02740 1951fb53a14cb2b45b2acefed0f9226e 451 PANTHER PTHR11606 22 451 5.8E-217 T 22-04-2016 SMGD1_RS02740 1951fb53a14cb2b45b2acefed0f9226e 451 Gene3D G3DSA:1.10.285.10 21 65 6.7E-15 T 22-04-2016 SMGD1_RS02740 1951fb53a14cb2b45b2acefed0f9226e 451 SUPERFAMILY SSF51735 200 451 6.79E-66 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS02740 1951fb53a14cb2b45b2acefed0f9226e 451 SMART SM00839 202 450 2.9E-76 T 22-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 SMGD1_RS02740 1951fb53a14cb2b45b2acefed0f9226e 451 Gene3D G3DSA:3.40.192.10 66 185 5.3E-59 T 22-04-2016 SMGD1_RS02740 1951fb53a14cb2b45b2acefed0f9226e 451 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 120 133 - T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 SMGD1_RS02740 1951fb53a14cb2b45b2acefed0f9226e 451 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 191 213 3.4E-29 T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 SMGD1_RS02740 1951fb53a14cb2b45b2acefed0f9226e 451 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 376 387 3.4E-29 T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 SMGD1_RS02740 1951fb53a14cb2b45b2acefed0f9226e 451 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 112 126 3.4E-29 T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 SMGD1_RS02740 1951fb53a14cb2b45b2acefed0f9226e 451 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 234 254 3.4E-29 T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 SMGD1_RS02740 1951fb53a14cb2b45b2acefed0f9226e 451 PANTHER PTHR11606:SF4 22 451 5.8E-217 T 22-04-2016 SMGD1_RS02740 1951fb53a14cb2b45b2acefed0f9226e 451 Gene3D G3DSA:3.40.50.720 200 451 2.5E-70 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS02740 1951fb53a14cb2b45b2acefed0f9226e 451 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 200 450 4.8E-77 T 22-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 SMGD1_RS02740 1951fb53a14cb2b45b2acefed0f9226e 451 SUPERFAMILY SSF53223 19 194 5.12E-67 T 22-04-2016 SMGD1_RS02740 1951fb53a14cb2b45b2acefed0f9226e 451 PIRSF PIRSF000185 20 451 5.0E-108 T 22-04-2016 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 SMGD1_RS02740 1951fb53a14cb2b45b2acefed0f9226e 451 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 55 183 2.5E-49 T 22-04-2016 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 SMGD1_RS07980 1d1af48f2095d833196102f0d51fde7e 403 PANTHER PTHR30489 1 402 1.6E-38 T 22-04-2016 SMGD1_RS07980 1d1af48f2095d833196102f0d51fde7e 403 Pfam PF12704 MacB-like periplasmic core domain 20 226 1.1E-8 T 22-04-2016 IPR025857 MacB-like periplasmic core domain SMGD1_RS07980 1d1af48f2095d833196102f0d51fde7e 403 Pfam PF02687 FtsX-like permease family 266 395 3.8E-16 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 SMGD1_RS12730 358e2796a36237334ef1d058a3574500 956 PANTHER PTHR22847 48 214 6.7E-36 T 22-04-2016 SMGD1_RS12730 358e2796a36237334ef1d058a3574500 956 PANTHER PTHR22847 453 538 6.7E-36 T 22-04-2016 SMGD1_RS12730 358e2796a36237334ef1d058a3574500 956 PANTHER PTHR22847 300 360 6.7E-36 T 22-04-2016 SMGD1_RS12730 358e2796a36237334ef1d058a3574500 956 SMART SM00320 420 469 36.0 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS12730 358e2796a36237334ef1d058a3574500 956 SMART SM00320 67 121 200.0 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS12730 358e2796a36237334ef1d058a3574500 956 SMART SM00320 211 250 13.0 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS12730 358e2796a36237334ef1d058a3574500 956 SMART SM00320 124 163 3.6E-10 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS12730 358e2796a36237334ef1d058a3574500 956 SMART SM00320 471 508 2.4E-7 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS12730 358e2796a36237334ef1d058a3574500 956 SMART SM00320 296 335 3.9 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS12730 358e2796a36237334ef1d058a3574500 956 SMART SM00320 23 61 0.0011 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS12730 358e2796a36237334ef1d058a3574500 956 SMART SM00320 167 208 7.3 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS12730 358e2796a36237334ef1d058a3574500 956 PRINTS PR00320 G protein beta WD-40 repeat signature 150 164 5.9E-7 T 22-04-2016 IPR020472 G-protein beta WD-40 repeat SMGD1_RS12730 358e2796a36237334ef1d058a3574500 956 PRINTS PR00320 G protein beta WD-40 repeat signature 48 62 5.9E-7 T 22-04-2016 IPR020472 G-protein beta WD-40 repeat SMGD1_RS12730 358e2796a36237334ef1d058a3574500 956 PRINTS PR00320 G protein beta WD-40 repeat signature 495 509 5.9E-7 T 22-04-2016 IPR020472 G-protein beta WD-40 repeat SMGD1_RS12730 358e2796a36237334ef1d058a3574500 956 SUPERFAMILY SSF50978 28 364 4.88E-42 T 22-04-2016 IPR017986 WD40-repeat-containing domain GO:0005515 SMGD1_RS12730 358e2796a36237334ef1d058a3574500 956 SUPERFAMILY SSF50998 394 542 1.73E-15 T 22-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily SMGD1_RS12730 358e2796a36237334ef1d058a3574500 956 SUPERFAMILY SSF50998 306 365 1.73E-15 T 22-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily SMGD1_RS12730 358e2796a36237334ef1d058a3574500 956 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 495 509 - T 22-04-2016 IPR019775 WD40 repeat, conserved site SMGD1_RS12730 358e2796a36237334ef1d058a3574500 956 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 150 164 - T 22-04-2016 IPR019775 WD40 repeat, conserved site SMGD1_RS12730 358e2796a36237334ef1d058a3574500 956 Gene3D G3DSA:3.40.50.1460 719 856 2.5E-11 T 22-04-2016 IPR029030 Caspase-like domain SMGD1_RS12730 358e2796a36237334ef1d058a3574500 956 Gene3D G3DSA:2.130.10.10 439 554 4.3E-13 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 SMGD1_RS12730 358e2796a36237334ef1d058a3574500 956 ProSitePatterns PS00018 EF-hand calcium-binding domain. 768 780 - T 22-04-2016 IPR018247 EF-Hand 1, calcium-binding site SMGD1_RS12730 358e2796a36237334ef1d058a3574500 956 ProSitePatterns PS00018 EF-hand calcium-binding domain. 910 922 - T 22-04-2016 IPR018247 EF-Hand 1, calcium-binding site SMGD1_RS12730 358e2796a36237334ef1d058a3574500 956 Gene3D G3DSA:2.130.10.10 30 89 6.0E-9 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 SMGD1_RS12730 358e2796a36237334ef1d058a3574500 956 Gene3D G3DSA:2.130.10.10 90 359 6.2E-39 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 SMGD1_RS12730 358e2796a36237334ef1d058a3574500 956 Pfam PF00656 Caspase domain 721 941 1.9E-16 T 22-04-2016 SMGD1_RS12730 358e2796a36237334ef1d058a3574500 956 Pfam PF00400 WD domain, G-beta repeat 31 61 2.0E-4 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS12730 358e2796a36237334ef1d058a3574500 956 Pfam PF00400 WD domain, G-beta repeat 474 508 6.6E-5 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS12730 358e2796a36237334ef1d058a3574500 956 Pfam PF00400 WD domain, G-beta repeat 127 163 8.3E-7 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS12730 358e2796a36237334ef1d058a3574500 956 SUPERFAMILY SSF52129 718 943 1.2E-13 T 22-04-2016 IPR029030 Caspase-like domain SMGD1_RS08425 9413b5c20a5a0af5c856b8fe295280de 747 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 188 199 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SMGD1_RS08425 9413b5c20a5a0af5c856b8fe295280de 747 Gene3D G3DSA:3.40.228.10 338 492 2.5E-6 T 22-04-2016 SMGD1_RS08425 9413b5c20a5a0af5c856b8fe295280de 747 PANTHER PTHR11615 6 320 7.1E-62 T 22-04-2016 SMGD1_RS08425 9413b5c20a5a0af5c856b8fe295280de 747 PANTHER PTHR11615 426 491 7.1E-62 T 22-04-2016 SMGD1_RS08425 9413b5c20a5a0af5c856b8fe295280de 747 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 4 79 4.7E-17 T 22-04-2016 SMGD1_RS08425 9413b5c20a5a0af5c856b8fe295280de 747 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 86 124 5.2E-12 T 22-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 SMGD1_RS08425 9413b5c20a5a0af5c856b8fe295280de 747 SUPERFAMILY SSF54292 5 77 1.72E-17 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 SMGD1_RS08425 9413b5c20a5a0af5c856b8fe295280de 747 SMART SM00926 217 273 9.0E-6 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 SMGD1_RS08425 9413b5c20a5a0af5c856b8fe295280de 747 Pfam PF13237 4Fe-4S dicluster domain 141 199 1.5E-8 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SMGD1_RS08425 9413b5c20a5a0af5c856b8fe295280de 747 Gene3D G3DSA:2.20.25.90 220 272 4.4E-6 T 22-04-2016 SMGD1_RS08425 9413b5c20a5a0af5c856b8fe295280de 747 Gene3D G3DSA:3.30.70.20 143 216 2.1E-10 T 22-04-2016 SMGD1_RS08425 9413b5c20a5a0af5c856b8fe295280de 747 Gene3D G3DSA:3.10.20.30 4 78 1.0E-8 T 22-04-2016 IPR012675 Beta-grasp domain SMGD1_RS08425 9413b5c20a5a0af5c856b8fe295280de 747 SMART SM00929 86 126 1.3E-13 T 22-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 SMGD1_RS08425 9413b5c20a5a0af5c856b8fe295280de 747 SUPERFAMILY SSF54862 78 209 1.13E-31 T 22-04-2016 SMGD1_RS08425 9413b5c20a5a0af5c856b8fe295280de 747 PANTHER PTHR11615:SF38 6 320 7.1E-62 T 22-04-2016 SMGD1_RS08425 9413b5c20a5a0af5c856b8fe295280de 747 PANTHER PTHR11615:SF38 426 491 7.1E-62 T 22-04-2016 SMGD1_RS08425 9413b5c20a5a0af5c856b8fe295280de 747 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 34 51 - T 22-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 SMGD1_RS08425 9413b5c20a5a0af5c856b8fe295280de 747 SUPERFAMILY SSF53706 450 592 2.09E-35 T 22-04-2016 SMGD1_RS08425 9413b5c20a5a0af5c856b8fe295280de 747 SUPERFAMILY SSF53706 215 422 2.09E-35 T 22-04-2016 SMGD1_RS13155 082dc27d2d67e81d2dafe0d8b8a90fbf 158 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 23 78 9.0E-25 T 22-04-2016 SMGD1_RS13155 082dc27d2d67e81d2dafe0d8b8a90fbf 158 SUPERFAMILY SSF55021 80 158 8.55E-19 T 22-04-2016 SMGD1_RS13155 082dc27d2d67e81d2dafe0d8b8a90fbf 158 Gene3D G3DSA:3.30.70.260 6 81 5.0E-29 T 22-04-2016 SMGD1_RS13155 082dc27d2d67e81d2dafe0d8b8a90fbf 158 Pfam PF10369 Small subunit of acetolactate synthase 87 158 2.4E-17 T 22-04-2016 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SMGD1_RS13155 082dc27d2d67e81d2dafe0d8b8a90fbf 158 Pfam PF13710 ACT domain 18 78 1.4E-12 T 22-04-2016 SMGD1_RS13155 082dc27d2d67e81d2dafe0d8b8a90fbf 158 PANTHER PTHR30239 1 158 8.3E-43 T 22-04-2016 SMGD1_RS13155 082dc27d2d67e81d2dafe0d8b8a90fbf 158 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 7 158 1.8E-42 T 22-04-2016 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SMGD1_RS13155 082dc27d2d67e81d2dafe0d8b8a90fbf 158 Gene3D G3DSA:3.30.70.1150 86 158 2.3E-18 T 22-04-2016 SMGD1_RS13155 082dc27d2d67e81d2dafe0d8b8a90fbf 158 SUPERFAMILY SSF55021 7 79 1.66E-18 T 22-04-2016 SMGD1_RS03505 2bfdff8aca17150773a93107740d4d38 628 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 622 35.01 T 22-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 SMGD1_RS03505 2bfdff8aca17150773a93107740d4d38 628 Gene3D G3DSA:3.90.640.10 224 308 1.1E-29 T 22-04-2016 SMGD1_RS03505 2bfdff8aca17150773a93107740d4d38 628 Gene3D G3DSA:3.30.420.40 118 190 9.8E-66 T 22-04-2016 SMGD1_RS03505 2bfdff8aca17150773a93107740d4d38 628 Gene3D G3DSA:3.30.420.40 4 52 9.8E-66 T 22-04-2016 SMGD1_RS03505 2bfdff8aca17150773a93107740d4d38 628 Gene3D G3DSA:3.30.420.40 313 354 2.6E-32 T 22-04-2016 SMGD1_RS03505 2bfdff8aca17150773a93107740d4d38 628 Gene3D G3DSA:3.30.420.40 191 223 2.6E-32 T 22-04-2016 SMGD1_RS03505 2bfdff8aca17150773a93107740d4d38 628 SUPERFAMILY SSF100920 379 535 3.79E-59 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain SMGD1_RS03505 2bfdff8aca17150773a93107740d4d38 628 Gene3D G3DSA:1.20.1270.10 528 600 3.0E-22 T 22-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain SMGD1_RS03505 2bfdff8aca17150773a93107740d4d38 628 SUPERFAMILY SSF53067 1 181 8.1E-61 T 22-04-2016 SMGD1_RS03505 2bfdff8aca17150773a93107740d4d38 628 PANTHER PTHR19375 2 628 0.0 T 22-04-2016 SMGD1_RS03505 2bfdff8aca17150773a93107740d4d38 628 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 190 203 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site SMGD1_RS03505 2bfdff8aca17150773a93107740d4d38 628 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site SMGD1_RS03505 2bfdff8aca17150773a93107740d4d38 628 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 601 1.9E-281 T 22-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 SMGD1_RS03505 2bfdff8aca17150773a93107740d4d38 628 PRINTS PR00301 70kDa heat shock protein signature 54 62 2.4E-78 T 22-04-2016 IPR013126 Heat shock protein 70 family SMGD1_RS03505 2bfdff8aca17150773a93107740d4d38 628 PRINTS PR00301 70kDa heat shock protein signature 31 43 2.4E-78 T 22-04-2016 IPR013126 Heat shock protein 70 family SMGD1_RS03505 2bfdff8aca17150773a93107740d4d38 628 PRINTS PR00301 70kDa heat shock protein signature 196 206 2.4E-78 T 22-04-2016 IPR013126 Heat shock protein 70 family SMGD1_RS03505 2bfdff8aca17150773a93107740d4d38 628 PRINTS PR00301 70kDa heat shock protein signature 383 402 2.4E-78 T 22-04-2016 IPR013126 Heat shock protein 70 family SMGD1_RS03505 2bfdff8aca17150773a93107740d4d38 628 PRINTS PR00301 70kDa heat shock protein signature 328 344 2.4E-78 T 22-04-2016 IPR013126 Heat shock protein 70 family SMGD1_RS03505 2bfdff8aca17150773a93107740d4d38 628 PRINTS PR00301 70kDa heat shock protein signature 137 157 2.4E-78 T 22-04-2016 IPR013126 Heat shock protein 70 family SMGD1_RS03505 2bfdff8aca17150773a93107740d4d38 628 PRINTS PR00301 70kDa heat shock protein signature 360 380 2.4E-78 T 22-04-2016 IPR013126 Heat shock protein 70 family SMGD1_RS03505 2bfdff8aca17150773a93107740d4d38 628 PRINTS PR00301 70kDa heat shock protein signature 3 16 2.4E-78 T 22-04-2016 IPR013126 Heat shock protein 70 family SMGD1_RS03505 2bfdff8aca17150773a93107740d4d38 628 PRINTS PR00301 70kDa heat shock protein signature 464 480 2.4E-78 T 22-04-2016 IPR013126 Heat shock protein 70 family SMGD1_RS03505 2bfdff8aca17150773a93107740d4d38 628 Gene3D G3DSA:2.60.34.10 385 527 1.6E-66 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain SMGD1_RS03505 2bfdff8aca17150773a93107740d4d38 628 Gene3D G3DSA:3.30.30.30 53 105 8.4E-18 T 22-04-2016 SMGD1_RS03505 2bfdff8aca17150773a93107740d4d38 628 SUPERFAMILY SSF53067 185 377 7.13E-61 T 22-04-2016 SMGD1_RS03505 2bfdff8aca17150773a93107740d4d38 628 Pfam PF00012 Hsp70 protein 4 601 4.4E-242 T 22-04-2016 IPR013126 Heat shock protein 70 family SMGD1_RS03505 2bfdff8aca17150773a93107740d4d38 628 PANTHER PTHR19375:SF173 2 628 0.0 T 22-04-2016 SMGD1_RS03505 2bfdff8aca17150773a93107740d4d38 628 SUPERFAMILY SSF100934 502 601 3.14E-14 T 22-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain SMGD1_RS00465 a374351513746f4a42ca6e2ee5eb4ba6 226 Pfam PF02353 Mycolic acid cyclopropane synthetase 16 135 2.0E-10 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS00465 a374351513746f4a42ca6e2ee5eb4ba6 226 PANTHER PTHR10108 17 139 1.8E-12 T 22-04-2016 SMGD1_RS00465 a374351513746f4a42ca6e2ee5eb4ba6 226 Gene3D G3DSA:3.40.50.150 19 201 2.4E-22 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS00465 a374351513746f4a42ca6e2ee5eb4ba6 226 SUPERFAMILY SSF53335 18 199 2.39E-28 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS08700 dfdcca9dc58d6875f5b7ee7cc656ce35 736 PANTHER PTHR24423 266 654 2.5E-158 T 22-04-2016 SMGD1_RS08700 dfdcca9dc58d6875f5b7ee7cc656ce35 736 SMART SM00304 199 254 6.0E-5 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SMGD1_RS08700 dfdcca9dc58d6875f5b7ee7cc656ce35 736 SMART SM00448 538 651 9.1E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS08700 dfdcca9dc58d6875f5b7ee7cc656ce35 736 Gene3D G3DSA:3.40.50.2300 536 655 2.3E-35 T 22-04-2016 SMGD1_RS08700 dfdcca9dc58d6875f5b7ee7cc656ce35 736 SMART SM00388 287 352 5.2E-26 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS08700 dfdcca9dc58d6875f5b7ee7cc656ce35 736 Pfam PF00672 HAMP domain 183 249 2.7E-11 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SMGD1_RS08700 dfdcca9dc58d6875f5b7ee7cc656ce35 736 SUPERFAMILY SSF47384 273 353 4.32E-22 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS08700 dfdcca9dc58d6875f5b7ee7cc656ce35 736 SMART SM00387 399 511 1.7E-41 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS08700 dfdcca9dc58d6875f5b7ee7cc656ce35 736 Gene3D G3DSA:3.30.565.10 358 507 3.7E-47 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS08700 dfdcca9dc58d6875f5b7ee7cc656ce35 736 PRINTS PR00344 Bacterial sensor protein C-terminal signature 454 464 1.6E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS08700 dfdcca9dc58d6875f5b7ee7cc656ce35 736 PRINTS PR00344 Bacterial sensor protein C-terminal signature 436 450 1.6E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS08700 dfdcca9dc58d6875f5b7ee7cc656ce35 736 PRINTS PR00344 Bacterial sensor protein C-terminal signature 495 508 1.6E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS08700 dfdcca9dc58d6875f5b7ee7cc656ce35 736 PRINTS PR00344 Bacterial sensor protein C-terminal signature 471 489 1.6E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS08700 dfdcca9dc58d6875f5b7ee7cc656ce35 736 Gene3D G3DSA:1.10.287.130 279 348 2.9E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS08700 dfdcca9dc58d6875f5b7ee7cc656ce35 736 SUPERFAMILY SSF55874 341 507 1.31E-46 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS08700 dfdcca9dc58d6875f5b7ee7cc656ce35 736 SUPERFAMILY SSF158472 202 251 3.66E-7 T 22-04-2016 SMGD1_RS08700 dfdcca9dc58d6875f5b7ee7cc656ce35 736 SUPERFAMILY SSF52172 536 655 1.42E-32 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS08700 dfdcca9dc58d6875f5b7ee7cc656ce35 736 Pfam PF00072 Response regulator receiver domain 540 650 7.3E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS08700 dfdcca9dc58d6875f5b7ee7cc656ce35 736 Pfam PF00512 His Kinase A (phospho-acceptor) domain 288 352 6.4E-20 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS08700 dfdcca9dc58d6875f5b7ee7cc656ce35 736 PANTHER PTHR24423:SF491 266 654 2.5E-158 T 22-04-2016 SMGD1_RS08700 dfdcca9dc58d6875f5b7ee7cc656ce35 736 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 399 510 6.2E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS13370 c75d1fb15693f2ffc36512478bdd0af2 648 PANTHER PTHR10799 341 645 2.9E-24 T 22-04-2016 SMGD1_RS13370 c75d1fb15693f2ffc36512478bdd0af2 648 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 484 646 9.5E-49 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS13370 c75d1fb15693f2ffc36512478bdd0af2 648 Gene3D G3DSA:3.30.70.270 488 646 5.9E-48 T 22-04-2016 SMGD1_RS13370 c75d1fb15693f2ffc36512478bdd0af2 648 SUPERFAMILY SSF103190 142 244 9.68E-6 T 22-04-2016 IPR029151 Periplasmic sensor domain-like SMGD1_RS13370 c75d1fb15693f2ffc36512478bdd0af2 648 SMART SM00267 476 648 9.7E-55 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS13370 c75d1fb15693f2ffc36512478bdd0af2 648 Gene3D G3DSA:3.30.450.20 148 239 2.3E-14 T 22-04-2016 SMGD1_RS13370 c75d1fb15693f2ffc36512478bdd0af2 648 PANTHER PTHR10799:SF750 341 645 2.9E-24 T 22-04-2016 SMGD1_RS13370 c75d1fb15693f2ffc36512478bdd0af2 648 SUPERFAMILY SSF55073 492 645 1.1E-44 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS13370 c75d1fb15693f2ffc36512478bdd0af2 648 Pfam PF00990 Diguanylate cyclase, GGDEF domain 488 644 4.9E-44 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS03485 e59294c37a75b52d5d8cc237fac2b10f 636 SMART SM00267 211 378 3.2E-40 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS03485 e59294c37a75b52d5d8cc237fac2b10f 636 Pfam PF00990 Diguanylate cyclase, GGDEF domain 224 374 5.8E-36 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS03485 e59294c37a75b52d5d8cc237fac2b10f 636 SMART SM00052 388 628 1.1E-39 T 22-04-2016 IPR001633 EAL domain SMGD1_RS03485 e59294c37a75b52d5d8cc237fac2b10f 636 SUPERFAMILY SSF55073 227 380 1.26E-39 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS03485 e59294c37a75b52d5d8cc237fac2b10f 636 Gene3D G3DSA:3.20.20.450 397 626 4.8E-55 T 22-04-2016 IPR001633 EAL domain SMGD1_RS03485 e59294c37a75b52d5d8cc237fac2b10f 636 PANTHER PTHR33121:SF10 271 635 3.7E-49 T 22-04-2016 SMGD1_RS03485 e59294c37a75b52d5d8cc237fac2b10f 636 Pfam PF00563 EAL domain 397 623 1.4E-50 T 22-04-2016 IPR001633 EAL domain SMGD1_RS03485 e59294c37a75b52d5d8cc237fac2b10f 636 PANTHER PTHR33121 271 635 3.7E-49 T 22-04-2016 SMGD1_RS03485 e59294c37a75b52d5d8cc237fac2b10f 636 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 223 377 4.5E-41 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS03485 e59294c37a75b52d5d8cc237fac2b10f 636 Gene3D G3DSA:3.30.70.270 224 384 6.2E-43 T 22-04-2016 SMGD1_RS03485 e59294c37a75b52d5d8cc237fac2b10f 636 SUPERFAMILY SSF141868 395 625 3.66E-59 T 22-04-2016 IPR001633 EAL domain SMGD1_RS06825 34e351f716ef206c542b3b78eee489cd 421 Pfam PF03952 Enolase, N-terminal domain 3 132 6.9E-54 T 22-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 SMGD1_RS06825 34e351f716ef206c542b3b78eee489cd 421 PANTHER PTHR11902 1 408 3.0E-230 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SMGD1_RS06825 34e351f716ef206c542b3b78eee489cd 421 Hamap MF_00318 Enolase [eno]. 1 409 42.749 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SMGD1_RS06825 34e351f716ef206c542b3b78eee489cd 421 SMART SM01193 3 132 9.5E-83 T 22-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 SMGD1_RS06825 34e351f716ef206c542b3b78eee489cd 421 PRINTS PR00148 Enolase signature 159 172 4.1E-41 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SMGD1_RS06825 34e351f716ef206c542b3b78eee489cd 421 PRINTS PR00148 Enolase signature 332 346 4.1E-41 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SMGD1_RS06825 34e351f716ef206c542b3b78eee489cd 421 PRINTS PR00148 Enolase signature 361 378 4.1E-41 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SMGD1_RS06825 34e351f716ef206c542b3b78eee489cd 421 PRINTS PR00148 Enolase signature 309 320 4.1E-41 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SMGD1_RS06825 34e351f716ef206c542b3b78eee489cd 421 PRINTS PR00148 Enolase signature 36 50 4.1E-41 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SMGD1_RS06825 34e351f716ef206c542b3b78eee489cd 421 PRINTS PR00148 Enolase signature 105 121 4.1E-41 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SMGD1_RS06825 34e351f716ef206c542b3b78eee489cd 421 SUPERFAMILY SSF51604 136 410 6.79E-119 T 22-04-2016 IPR029065 Enolase C-terminal domain-like SMGD1_RS06825 34e351f716ef206c542b3b78eee489cd 421 SMART SM01192 137 421 5.2E-199 T 22-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 SMGD1_RS06825 34e351f716ef206c542b3b78eee489cd 421 Pfam PF00113 Enolase, C-terminal TIM barrel domain 138 410 1.3E-118 T 22-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 SMGD1_RS06825 34e351f716ef206c542b3b78eee489cd 421 SUPERFAMILY SSF54826 3 134 1.92E-50 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SMGD1_RS06825 34e351f716ef206c542b3b78eee489cd 421 Gene3D G3DSA:3.30.390.10 3 124 2.7E-48 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SMGD1_RS06825 34e351f716ef206c542b3b78eee489cd 421 PIRSF PIRSF001400 1 421 3.8E-182 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SMGD1_RS06825 34e351f716ef206c542b3b78eee489cd 421 Gene3D G3DSA:3.20.20.120 126 411 1.6E-126 T 22-04-2016 IPR029065 Enolase C-terminal domain-like SMGD1_RS06825 34e351f716ef206c542b3b78eee489cd 421 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 3 420 1.2E-196 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SMGD1_RS06825 34e351f716ef206c542b3b78eee489cd 421 ProSitePatterns PS00164 Enolase signature. 332 345 - T 22-04-2016 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SMGD1_RS03325 3cb307cb1337732b1194420e7a966e9f 392 PANTHER PTHR13504 42 391 5.4E-29 T 22-04-2016 SMGD1_RS03325 3cb307cb1337732b1194420e7a966e9f 392 Gene3D G3DSA:1.10.10.10 335 375 1.5E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMGD1_RS03325 3cb307cb1337732b1194420e7a966e9f 392 Pfam PF02661 Fic/DOC family 114 219 7.4E-18 T 22-04-2016 IPR003812 Fido domain SMGD1_RS03325 3cb307cb1337732b1194420e7a966e9f 392 SUPERFAMILY SSF140931 94 292 3.79E-30 T 22-04-2016 IPR003812 Fido domain SMGD1_RS03325 3cb307cb1337732b1194420e7a966e9f 392 Gene3D G3DSA:1.10.3290.10 20 296 2.0E-46 T 22-04-2016 IPR003812 Fido domain SMGD1_RS11830 d640e9a684b1e51c94cf0ae4d4cde1c5 373 Pfam PF00226 DnaJ domain 6 67 3.2E-24 T 22-04-2016 IPR001623 DnaJ domain SMGD1_RS11830 d640e9a684b1e51c94cf0ae4d4cde1c5 373 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 348 7.4E-119 T 22-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 SMGD1_RS11830 d640e9a684b1e51c94cf0ae4d4cde1c5 373 Pfam PF01556 DnaJ C terminal domain 122 332 6.6E-37 T 22-04-2016 IPR002939 Chaperone DnaJ, C-terminal SMGD1_RS11830 d640e9a684b1e51c94cf0ae4d4cde1c5 373 Gene3D G3DSA:2.60.260.20 120 137 3.6E-16 T 22-04-2016 SMGD1_RS11830 d640e9a684b1e51c94cf0ae4d4cde1c5 373 Gene3D G3DSA:2.60.260.20 199 253 3.6E-16 T 22-04-2016 SMGD1_RS11830 d640e9a684b1e51c94cf0ae4d4cde1c5 373 Gene3D G3DSA:2.60.260.20 256 333 4.3E-16 T 22-04-2016 SMGD1_RS11830 d640e9a684b1e51c94cf0ae4d4cde1c5 373 SMART SM00271 4 62 7.8E-26 T 22-04-2016 IPR001623 DnaJ domain SMGD1_RS11830 d640e9a684b1e51c94cf0ae4d4cde1c5 373 Gene3D G3DSA:2.10.230.10 138 198 5.0E-19 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 SMGD1_RS11830 d640e9a684b1e51c94cf0ae4d4cde1c5 373 SUPERFAMILY SSF57938 135 209 1.44E-17 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 SMGD1_RS11830 d640e9a684b1e51c94cf0ae4d4cde1c5 373 Gene3D G3DSA:1.10.287.110 2 102 2.1E-31 T 22-04-2016 IPR001623 DnaJ domain SMGD1_RS11830 d640e9a684b1e51c94cf0ae4d4cde1c5 373 SUPERFAMILY SSF46565 2 105 7.59E-30 T 22-04-2016 IPR001623 DnaJ domain SMGD1_RS11830 d640e9a684b1e51c94cf0ae4d4cde1c5 373 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 371 33.906 T 22-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 SMGD1_RS11830 d640e9a684b1e51c94cf0ae4d4cde1c5 373 SUPERFAMILY SSF49493 257 343 5.49E-18 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 SMGD1_RS11830 d640e9a684b1e51c94cf0ae4d4cde1c5 373 Pfam PF00684 DnaJ central domain 148 207 6.4E-12 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 SMGD1_RS11830 d640e9a684b1e51c94cf0ae4d4cde1c5 373 PANTHER PTHR24078:SF190 6 346 2.0E-115 T 22-04-2016 SMGD1_RS11830 d640e9a684b1e51c94cf0ae4d4cde1c5 373 PRINTS PR00625 DnaJ domain signature 62 81 2.6E-24 T 22-04-2016 IPR001623 DnaJ domain SMGD1_RS11830 d640e9a684b1e51c94cf0ae4d4cde1c5 373 PRINTS PR00625 DnaJ domain signature 25 40 2.6E-24 T 22-04-2016 IPR001623 DnaJ domain SMGD1_RS11830 d640e9a684b1e51c94cf0ae4d4cde1c5 373 PRINTS PR00625 DnaJ domain signature 42 62 2.6E-24 T 22-04-2016 IPR001623 DnaJ domain SMGD1_RS11830 d640e9a684b1e51c94cf0ae4d4cde1c5 373 PRINTS PR00625 DnaJ domain signature 7 25 2.6E-24 T 22-04-2016 IPR001623 DnaJ domain SMGD1_RS11830 d640e9a684b1e51c94cf0ae4d4cde1c5 373 SUPERFAMILY SSF49493 186 266 4.32E-17 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 SMGD1_RS11830 d640e9a684b1e51c94cf0ae4d4cde1c5 373 SUPERFAMILY SSF49493 120 139 4.32E-17 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 SMGD1_RS11830 d640e9a684b1e51c94cf0ae4d4cde1c5 373 PANTHER PTHR24078 6 346 2.0E-115 T 22-04-2016 SMGD1_RS02890 637bd9de4764f064abd253e0feaf6cc0 418 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 233 401 2.1E-49 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS02890 637bd9de4764f064abd253e0feaf6cc0 418 Pfam PF00990 Diguanylate cyclase, GGDEF domain 238 397 1.4E-45 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS02890 637bd9de4764f064abd253e0feaf6cc0 418 SMART SM00267 226 402 6.2E-61 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS02890 637bd9de4764f064abd253e0feaf6cc0 418 PANTHER PTHR10799:SF750 270 397 6.2E-29 T 22-04-2016 SMGD1_RS02890 637bd9de4764f064abd253e0feaf6cc0 418 Pfam PF12729 Four helix bundle sensory module for signal transduction 7 178 8.1E-17 T 22-04-2016 IPR024478 4HB MCP domain SMGD1_RS02890 637bd9de4764f064abd253e0feaf6cc0 418 Gene3D G3DSA:3.30.70.270 238 404 1.4E-48 T 22-04-2016 SMGD1_RS02890 637bd9de4764f064abd253e0feaf6cc0 418 SUPERFAMILY SSF55073 242 401 1.49E-44 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS02890 637bd9de4764f064abd253e0feaf6cc0 418 PANTHER PTHR10799 270 397 6.2E-29 T 22-04-2016 SMGD1_RS14380 86238f83fc9629b3c37e1c0b467f043f 126 Pfam PF03061 Thioesterase superfamily 13 90 9.5E-13 T 22-04-2016 IPR006683 Thioesterase domain SMGD1_RS14380 86238f83fc9629b3c37e1c0b467f043f 126 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 2 92 3.6E-26 T 22-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 SMGD1_RS14380 86238f83fc9629b3c37e1c0b467f043f 126 PANTHER PTHR31793:SF9 3 123 4.2E-24 T 22-04-2016 SMGD1_RS14380 86238f83fc9629b3c37e1c0b467f043f 126 PANTHER PTHR31793 3 123 4.2E-24 T 22-04-2016 SMGD1_RS14380 86238f83fc9629b3c37e1c0b467f043f 126 Gene3D G3DSA:3.10.129.10 2 120 1.7E-31 T 22-04-2016 IPR029069 HotDog domain SMGD1_RS14380 86238f83fc9629b3c37e1c0b467f043f 126 SUPERFAMILY SSF54637 2 122 9.28E-27 T 22-04-2016 IPR029069 HotDog domain SMGD1_RS14380 86238f83fc9629b3c37e1c0b467f043f 126 PIRSF PIRSF003230 1 125 2.9E-35 T 22-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 SMGD1_RS14380 86238f83fc9629b3c37e1c0b467f043f 126 ProSitePatterns PS01328 4-hydroxybenzoyl-CoA thioesterase family active site. 4 21 - T 22-04-2016 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site GO:0016787 SMGD1_RS12700 70bfd15507762df364313fa09dd8a732 347 SUPERFAMILY SSF56349 55 338 4.71E-59 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 SMGD1_RS12700 70bfd15507762df364313fa09dd8a732 347 Pfam PF00589 Phage integrase family 164 331 8.0E-22 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 SMGD1_RS12700 70bfd15507762df364313fa09dd8a732 347 PANTHER PTHR30349:SF20 55 336 6.2E-36 T 22-04-2016 SMGD1_RS12700 70bfd15507762df364313fa09dd8a732 347 Gene3D G3DSA:1.10.443.10 163 338 4.1E-36 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 SMGD1_RS12700 70bfd15507762df364313fa09dd8a732 347 PANTHER PTHR30349 55 336 6.2E-36 T 22-04-2016 SMGD1_RS12700 70bfd15507762df364313fa09dd8a732 347 Gene3D G3DSA:1.10.150.130 70 154 6.4E-13 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal SMGD1_RS12700 70bfd15507762df364313fa09dd8a732 347 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 56 113 2.9E-9 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 SMGD1_RS12700 70bfd15507762df364313fa09dd8a732 347 Pfam PF12167 Domain of unknown function (DUF3596) 1 45 4.7E-8 T 22-04-2016 IPR022000 Domain of unknown function (DUF3596) SMGD1_RS00315 db161855135fd5652bd82d72927ac918 385 PRINTS PR00344 Bacterial sensor protein C-terminal signature 314 328 7.2E-7 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS00315 db161855135fd5652bd82d72927ac918 385 PRINTS PR00344 Bacterial sensor protein C-terminal signature 330 340 7.2E-7 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS00315 db161855135fd5652bd82d72927ac918 385 PRINTS PR00344 Bacterial sensor protein C-terminal signature 367 380 7.2E-7 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS00315 db161855135fd5652bd82d72927ac918 385 PRINTS PR00344 Bacterial sensor protein C-terminal signature 343 361 7.2E-7 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS00315 db161855135fd5652bd82d72927ac918 385 Gene3D G3DSA:3.30.565.10 239 383 9.4E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS00315 db161855135fd5652bd82d72927ac918 385 SMART SM00388 172 234 0.0046 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS00315 db161855135fd5652bd82d72927ac918 385 SMART SM00387 277 383 3.4E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS00315 db161855135fd5652bd82d72927ac918 385 PANTHER PTHR24423 159 381 1.8E-34 T 22-04-2016 SMGD1_RS00315 db161855135fd5652bd82d72927ac918 385 Gene3D G3DSA:1.10.287.130 167 225 9.9E-5 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS00315 db161855135fd5652bd82d72927ac918 385 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 279 382 7.3E-15 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS00315 db161855135fd5652bd82d72927ac918 385 PANTHER PTHR24423:SF394 159 381 1.8E-34 T 22-04-2016 SMGD1_RS00315 db161855135fd5652bd82d72927ac918 385 SUPERFAMILY SSF47384 159 232 5.49E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS00315 db161855135fd5652bd82d72927ac918 385 SUPERFAMILY SSF55874 229 381 7.2E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS03010 585bfc5f8e7ee9fc9c021c0bed95695d 195 Gene3D G3DSA:3.40.50.1460 1 92 1.7E-10 T 22-04-2016 IPR029030 Caspase-like domain SMGD1_RS03010 585bfc5f8e7ee9fc9c021c0bed95695d 195 PANTHER PTHR22576:SF32 1 158 3.9E-12 T 22-04-2016 SMGD1_RS03010 585bfc5f8e7ee9fc9c021c0bed95695d 195 Pfam PF00656 Caspase domain 5 187 2.1E-9 T 22-04-2016 SMGD1_RS03010 585bfc5f8e7ee9fc9c021c0bed95695d 195 PANTHER PTHR22576 1 158 3.9E-12 T 22-04-2016 SMGD1_RS03010 585bfc5f8e7ee9fc9c021c0bed95695d 195 SUPERFAMILY SSF52129 2 188 5.86E-7 T 22-04-2016 IPR029030 Caspase-like domain SMGD1_RS06425 120757fb71c7d19b42b9705592853a88 527 SMART SM00388 307 377 0.003 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS06425 120757fb71c7d19b42b9705592853a88 527 PRINTS PR00344 Bacterial sensor protein C-terminal signature 458 472 1.2E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS06425 120757fb71c7d19b42b9705592853a88 527 PRINTS PR00344 Bacterial sensor protein C-terminal signature 489 507 1.2E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS06425 120757fb71c7d19b42b9705592853a88 527 PRINTS PR00344 Bacterial sensor protein C-terminal signature 476 486 1.2E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS06425 120757fb71c7d19b42b9705592853a88 527 SMART SM00062 33 253 3.7E-14 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SMGD1_RS06425 120757fb71c7d19b42b9705592853a88 527 PANTHER PTHR24423 295 522 2.9E-33 T 22-04-2016 SMGD1_RS06425 120757fb71c7d19b42b9705592853a88 527 PANTHER PTHR24423 73 127 2.9E-33 T 22-04-2016 SMGD1_RS06425 120757fb71c7d19b42b9705592853a88 527 Gene3D G3DSA:3.30.565.10 380 524 4.8E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS06425 120757fb71c7d19b42b9705592853a88 527 Gene3D G3DSA:3.40.190.10 116 208 4.7E-10 T 22-04-2016 SMGD1_RS06425 120757fb71c7d19b42b9705592853a88 527 Gene3D G3DSA:3.40.190.10 32 115 1.2E-16 T 22-04-2016 SMGD1_RS06425 120757fb71c7d19b42b9705592853a88 527 Gene3D G3DSA:3.40.190.10 213 254 1.2E-16 T 22-04-2016 SMGD1_RS06425 120757fb71c7d19b42b9705592853a88 527 PANTHER PTHR24423:SF485 295 522 2.9E-33 T 22-04-2016 SMGD1_RS06425 120757fb71c7d19b42b9705592853a88 527 PANTHER PTHR24423:SF485 73 127 2.9E-33 T 22-04-2016 SMGD1_RS06425 120757fb71c7d19b42b9705592853a88 527 SUPERFAMILY SSF53850 35 251 1.94E-33 T 22-04-2016 SMGD1_RS06425 120757fb71c7d19b42b9705592853a88 527 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 40 251 7.0E-24 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SMGD1_RS06425 120757fb71c7d19b42b9705592853a88 527 SUPERFAMILY SSF55874 374 524 7.47E-30 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS06425 120757fb71c7d19b42b9705592853a88 527 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 418 523 3.8E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS06425 120757fb71c7d19b42b9705592853a88 527 SMART SM00387 417 527 1.2E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS06425 120757fb71c7d19b42b9705592853a88 527 Gene3D G3DSA:1.10.287.130 301 371 3.9E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS06425 120757fb71c7d19b42b9705592853a88 527 SUPERFAMILY SSF47384 298 376 2.16E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS13025 854d0c0a500ecc812e86066450125850 290 Pfam PF13186 Iron-sulfur cluster-binding domain 218 283 3.1E-12 T 22-04-2016 IPR023885 4Fe4S-binding SPASM domain SMGD1_RS13025 854d0c0a500ecc812e86066450125850 290 SUPERFAMILY SSF102114 4 286 3.53E-24 T 22-04-2016 SMGD1_RS13025 854d0c0a500ecc812e86066450125850 290 Gene3D G3DSA:3.20.20.70 3 286 2.8E-24 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMGD1_RS13025 854d0c0a500ecc812e86066450125850 290 PANTHER PTHR11228:SF28 6 286 2.1E-42 T 22-04-2016 SMGD1_RS13025 854d0c0a500ecc812e86066450125850 290 PANTHER PTHR11228 6 286 2.1E-42 T 22-04-2016 SMGD1_RS11655 85f6ebc3b6772c980e8dcf9ecbc67178 296 Gene3D G3DSA:3.40.50.720 2 43 1.5E-6 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS11655 85f6ebc3b6772c980e8dcf9ecbc67178 296 Gene3D G3DSA:3.40.50.720 44 154 3.0E-20 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS11655 85f6ebc3b6772c980e8dcf9ecbc67178 296 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 151 286 8.5E-45 T 22-04-2016 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SMGD1_RS11655 85f6ebc3b6772c980e8dcf9ecbc67178 296 PIRSF PIRSF000114 39 296 3.1E-68 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SMGD1_RS11655 85f6ebc3b6772c980e8dcf9ecbc67178 296 Gene3D G3DSA:1.10.1040.10 155 293 5.6E-47 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 SMGD1_RS11655 85f6ebc3b6772c980e8dcf9ecbc67178 296 SUPERFAMILY SSF48179 150 294 6.46E-46 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SMGD1_RS11655 85f6ebc3b6772c980e8dcf9ecbc67178 296 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 23 131 1.2E-16 T 22-04-2016 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SMGD1_RS11655 85f6ebc3b6772c980e8dcf9ecbc67178 296 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 2 292 29.894 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SMGD1_RS11655 85f6ebc3b6772c980e8dcf9ecbc67178 296 PANTHER PTHR11728:SF1 2 284 9.1E-74 T 22-04-2016 SMGD1_RS11655 85f6ebc3b6772c980e8dcf9ecbc67178 296 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 159 180 - T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SMGD1_RS11655 85f6ebc3b6772c980e8dcf9ecbc67178 296 SUPERFAMILY SSF51735 3 210 3.71E-26 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS11655 85f6ebc3b6772c980e8dcf9ecbc67178 296 PANTHER PTHR11728 2 284 9.1E-74 T 22-04-2016 SMGD1_RS09770 4e4f00e0abdc64bf4fff88a0549315c4 335 Gene3D G3DSA:3.40.50.720 6 192 5.9E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS09770 4e4f00e0abdc64bf4fff88a0549315c4 335 Pfam PF01370 NAD dependent epimerase/dehydratase family 13 257 2.5E-41 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 SMGD1_RS09770 4e4f00e0abdc64bf4fff88a0549315c4 335 SUPERFAMILY SSF51735 5 330 4.58E-67 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS09770 4e4f00e0abdc64bf4fff88a0549315c4 335 Gene3D G3DSA:3.90.25.10 193 311 1.7E-28 T 22-04-2016 SMGD1_RS09770 4e4f00e0abdc64bf4fff88a0549315c4 335 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 13 328 1.6E-101 T 22-04-2016 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20|UniPathway: UPA00356 SMGD1_RS09770 4e4f00e0abdc64bf4fff88a0549315c4 335 PRINTS PR01713 Nucleotide sugar epimerase signature 230 245 1.1E-5 T 22-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 SMGD1_RS09770 4e4f00e0abdc64bf4fff88a0549315c4 335 PRINTS PR01713 Nucleotide sugar epimerase signature 292 309 1.1E-5 T 22-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 SMGD1_RS09770 4e4f00e0abdc64bf4fff88a0549315c4 335 PRINTS PR01713 Nucleotide sugar epimerase signature 251 266 1.1E-5 T 22-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 SMGD1_RS09770 4e4f00e0abdc64bf4fff88a0549315c4 335 PANTHER PTHR10366 12 332 2.3E-80 T 22-04-2016 SMGD1_RS09770 4e4f00e0abdc64bf4fff88a0549315c4 335 PANTHER PTHR10366:SF469 12 332 2.3E-80 T 22-04-2016 SMGD1_RS10200 4eb8d06e95146db6ea81c465e9f6bbbc 1123 Gene3D G3DSA:3.40.50.300 404 443 4.9E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS10200 4eb8d06e95146db6ea81c465e9f6bbbc 1123 Pfam PF13087 AAA domain 880 1094 1.1E-37 T 22-04-2016 SMGD1_RS10200 4eb8d06e95146db6ea81c465e9f6bbbc 1123 Gene3D G3DSA:3.40.50.300 628 680 1.6E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS10200 4eb8d06e95146db6ea81c465e9f6bbbc 1123 Pfam PF13086 AAA domain 485 861 7.0E-29 T 22-04-2016 SMGD1_RS10200 4eb8d06e95146db6ea81c465e9f6bbbc 1123 SMART SM00382 498 882 6.3E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain SMGD1_RS10200 4eb8d06e95146db6ea81c465e9f6bbbc 1123 PANTHER PTHR10887 477 571 1.1E-46 T 22-04-2016 SMGD1_RS10200 4eb8d06e95146db6ea81c465e9f6bbbc 1123 PANTHER PTHR10887 897 1114 1.1E-46 T 22-04-2016 SMGD1_RS10200 4eb8d06e95146db6ea81c465e9f6bbbc 1123 PANTHER PTHR10887 788 869 1.1E-46 T 22-04-2016 SMGD1_RS10200 4eb8d06e95146db6ea81c465e9f6bbbc 1123 PANTHER PTHR10887 49 62 1.1E-46 T 22-04-2016 SMGD1_RS10200 4eb8d06e95146db6ea81c465e9f6bbbc 1123 PANTHER PTHR10887:SF140 477 571 1.1E-46 T 22-04-2016 SMGD1_RS10200 4eb8d06e95146db6ea81c465e9f6bbbc 1123 PANTHER PTHR10887:SF140 897 1114 1.1E-46 T 22-04-2016 SMGD1_RS10200 4eb8d06e95146db6ea81c465e9f6bbbc 1123 PANTHER PTHR10887:SF140 788 869 1.1E-46 T 22-04-2016 SMGD1_RS10200 4eb8d06e95146db6ea81c465e9f6bbbc 1123 PANTHER PTHR10887:SF140 49 62 1.1E-46 T 22-04-2016 SMGD1_RS10200 4eb8d06e95146db6ea81c465e9f6bbbc 1123 SUPERFAMILY SSF52540 974 1100 2.52E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS10200 4eb8d06e95146db6ea81c465e9f6bbbc 1123 SUPERFAMILY SSF52540 483 558 2.52E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS10200 4eb8d06e95146db6ea81c465e9f6bbbc 1123 SUPERFAMILY SSF52540 607 649 2.52E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS10200 4eb8d06e95146db6ea81c465e9f6bbbc 1123 SUPERFAMILY SSF52540 777 947 2.52E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS10200 4eb8d06e95146db6ea81c465e9f6bbbc 1123 Gene3D G3DSA:3.40.50.300 460 595 2.1E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS10200 4eb8d06e95146db6ea81c465e9f6bbbc 1123 Gene3D G3DSA:3.40.50.300 820 924 2.1E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS10200 4eb8d06e95146db6ea81c465e9f6bbbc 1123 Gene3D G3DSA:3.40.50.300 967 1097 9.4E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS12880 1d2d20f4690342ef4eb90144e261b6d0 275 PANTHER PTHR33525 4 207 2.6E-14 T 22-04-2016 SMGD1_RS12880 1d2d20f4690342ef4eb90144e261b6d0 275 Pfam PF08668 HDOD domain 13 205 3.4E-20 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD SMGD1_RS12880 1d2d20f4690342ef4eb90144e261b6d0 275 PANTHER PTHR33525:SF3 4 207 2.6E-14 T 22-04-2016 SMGD1_RS12880 1d2d20f4690342ef4eb90144e261b6d0 275 SUPERFAMILY SSF109604 3 272 1.6E-34 T 22-04-2016 SMGD1_RS12880 1d2d20f4690342ef4eb90144e261b6d0 275 Gene3D G3DSA:1.10.3150.10 3 273 3.5E-37 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD SMGD1_RS03230 6ae9725485f1d8a07608c553d51601f8 391 TIGRFAM TIGR00120 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase 8 391 2.1E-120 T 22-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 SMGD1_RS03230 6ae9725485f1d8a07608c553d51601f8 391 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 25 391 0.0 T 22-04-2016 SMGD1_RS03230 6ae9725485f1d8a07608c553d51601f8 391 SUPERFAMILY SSF56266 15 388 2.22E-119 T 22-04-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 SMGD1_RS03230 6ae9725485f1d8a07608c553d51601f8 391 Pfam PF01960 ArgJ family 19 391 1.5E-128 T 22-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 SMGD1_RS03230 6ae9725485f1d8a07608c553d51601f8 391 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 391 115.083 T 22-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 SMGD1_RS03230 6ae9725485f1d8a07608c553d51601f8 391 PANTHER PTHR23100:SF0 3 391 4.7E-147 T 22-04-2016 SMGD1_RS03230 6ae9725485f1d8a07608c553d51601f8 391 Gene3D G3DSA:3.60.70.12 8 262 3.5E-83 T 22-04-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 SMGD1_RS03230 6ae9725485f1d8a07608c553d51601f8 391 PANTHER PTHR23100 3 391 4.7E-147 T 22-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 SMGD1_RS05605 24f80cb032b48b38f2f3b979ecbd365d 175 Gene3D G3DSA:3.40.50.1820 2 174 1.0E-35 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SMGD1_RS05605 24f80cb032b48b38f2f3b979ecbd365d 175 Pfam PF06821 Serine hydrolase 5 174 4.8E-33 T 22-04-2016 IPR010662 Putative hydrolase RBBP9/YdeN GO:0016787 KEGG: 00231+3.-.-.-|KEGG: 00563+3.-.-.-|KEGG: 00983+3.-.-.- SMGD1_RS05605 24f80cb032b48b38f2f3b979ecbd365d 175 SUPERFAMILY SSF53474 3 173 1.48E-23 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SMGD1_RS12755 3e438b37269024c8ce3b452687153a35 159 PANTHER PTHR35011:SF4 1 143 2.3E-42 T 22-04-2016 SMGD1_RS12755 3e438b37269024c8ce3b452687153a35 159 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 20 149 3.7E-22 T 22-04-2016 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component SMGD1_RS12755 3e438b37269024c8ce3b452687153a35 159 PANTHER PTHR35011 1 143 2.3E-42 T 22-04-2016 SMGD1_RS12210 3d67e7622ab1f8320a0341c83d5913b6 360 PANTHER PTHR30486 10 357 8.3E-143 T 22-04-2016 SMGD1_RS12210 3d67e7622ab1f8320a0341c83d5913b6 360 SUPERFAMILY SSF52540 12 344 9.86E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS12210 3d67e7622ab1f8320a0341c83d5913b6 360 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 11 352 6.1E-137 T 22-04-2016 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 SMGD1_RS12210 3d67e7622ab1f8320a0341c83d5913b6 360 PANTHER PTHR30486:SF6 10 357 8.3E-143 T 22-04-2016 SMGD1_RS12210 3d67e7622ab1f8320a0341c83d5913b6 360 Pfam PF00437 Type II/IV secretion system protein 20 272 3.8E-43 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 SMGD1_RS12210 3d67e7622ab1f8320a0341c83d5913b6 360 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 201 215 - T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 SMGD1_RS12210 3d67e7622ab1f8320a0341c83d5913b6 360 Gene3D G3DSA:3.40.50.300 108 351 1.4E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS12210 3d67e7622ab1f8320a0341c83d5913b6 360 SMART SM00382 130 307 0.0011 T 22-04-2016 IPR003593 AAA+ ATPase domain SMGD1_RS01655 04b8df717d33672cfc87400244128991 145 Gene3D G3DSA:3.40.30.10 26 141 2.5E-20 T 22-04-2016 IPR012336 Thioredoxin-like fold SMGD1_RS01655 04b8df717d33672cfc87400244128991 145 Pfam PF13899 Thioredoxin-like 30 110 8.6E-15 T 22-04-2016 SMGD1_RS01655 04b8df717d33672cfc87400244128991 145 SUPERFAMILY SSF52833 24 126 1.8E-23 T 22-04-2016 IPR012336 Thioredoxin-like fold SMGD1_RS04920 4f45dccc24d5b5fbbb8b2574e97f8ad8 91 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 22-04-2016 IPR020934 Ribosomal protein S19 conserved site GO:0003723 SMGD1_RS04920 4f45dccc24d5b5fbbb8b2574e97f8ad8 91 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 83 1.3E-41 T 22-04-2016 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 SMGD1_RS04920 4f45dccc24d5b5fbbb8b2574e97f8ad8 91 SUPERFAMILY SSF54570 3 81 4.71E-33 T 22-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 SMGD1_RS04920 4f45dccc24d5b5fbbb8b2574e97f8ad8 91 PIRSF PIRSF002144 1 91 3.0E-30 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 SMGD1_RS04920 4f45dccc24d5b5fbbb8b2574e97f8ad8 91 Gene3D G3DSA:3.30.860.10 1 85 2.2E-36 T 22-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 SMGD1_RS04920 4f45dccc24d5b5fbbb8b2574e97f8ad8 91 Pfam PF00203 Ribosomal protein S19 3 80 1.1E-34 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 SMGD1_RS04920 4f45dccc24d5b5fbbb8b2574e97f8ad8 91 PANTHER PTHR11880 1 80 5.8E-42 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 SMGD1_RS04920 4f45dccc24d5b5fbbb8b2574e97f8ad8 91 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 1.1E-20 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 SMGD1_RS04920 4f45dccc24d5b5fbbb8b2574e97f8ad8 91 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 1.1E-20 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 SMGD1_RS04920 4f45dccc24d5b5fbbb8b2574e97f8ad8 91 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 1.1E-20 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 SMGD1_RS04920 4f45dccc24d5b5fbbb8b2574e97f8ad8 91 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 91 23.022 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 SMGD1_RS05580 2164e47530a4806dff5775588cf4a688 146 Pfam PF07681 DoxX 22 102 1.2E-16 T 22-04-2016 IPR032808 DoxX family SMGD1_RS05580 2164e47530a4806dff5775588cf4a688 146 PANTHER PTHR33452 1 141 1.4E-29 T 22-04-2016 SMGD1_RS05580 2164e47530a4806dff5775588cf4a688 146 PANTHER PTHR33452:SF5 1 141 1.4E-29 T 22-04-2016 SMGD1_RS05630 7c7b85292f0f0da7aea51dddb69a1d20 135 Pfam PF11756 Nitrous oxide-stimulated promoter 21 119 1.8E-11 T 22-04-2016 IPR020483 Uncharacterised protein family YgbA SMGD1_RS05630 7c7b85292f0f0da7aea51dddb69a1d20 135 ProDom PD075772 YGBA ECS3588 CYTOPLASMIC UVRA STM2860 AMIDOPHOSPHORIBOSYLTRANSFERASE VVA0912 SO0324 VPA0976 CPE0229 66 119 8.0E-14 T 22-04-2016 IPR020483 Uncharacterised protein family YgbA SMGD1_RS05085 dbc087c4e4e3414200c0a2ee8ad0ad98 263 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 102 116 - T 22-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 SMGD1_RS05085 dbc087c4e4e3414200c0a2ee8ad0ad98 263 Gene3D G3DSA:3.10.290.10 2 64 3.2E-19 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SMGD1_RS05085 dbc087c4e4e3414200c0a2ee8ad0ad98 263 SMART SM00363 3 70 2.7E-10 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SMGD1_RS05085 dbc087c4e4e3414200c0a2ee8ad0ad98 263 SUPERFAMILY SSF55174 3 59 7.26E-13 T 22-04-2016 SMGD1_RS05085 dbc087c4e4e3414200c0a2ee8ad0ad98 263 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 69 239 2.0E-44 T 22-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 SMGD1_RS05085 dbc087c4e4e3414200c0a2ee8ad0ad98 263 SUPERFAMILY SSF55120 49 251 7.77E-33 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMGD1_RS05085 dbc087c4e4e3414200c0a2ee8ad0ad98 263 PANTHER PTHR21600:SF2 183 255 7.2E-57 T 22-04-2016 SMGD1_RS05085 dbc087c4e4e3414200c0a2ee8ad0ad98 263 PANTHER PTHR21600:SF2 1 155 7.2E-57 T 22-04-2016 SMGD1_RS05085 dbc087c4e4e3414200c0a2ee8ad0ad98 263 Pfam PF01479 S4 domain 3 49 2.2E-9 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SMGD1_RS05085 dbc087c4e4e3414200c0a2ee8ad0ad98 263 PANTHER PTHR21600 183 255 7.2E-57 T 22-04-2016 SMGD1_RS05085 dbc087c4e4e3414200c0a2ee8ad0ad98 263 PANTHER PTHR21600 1 155 7.2E-57 T 22-04-2016 SMGD1_RS05085 dbc087c4e4e3414200c0a2ee8ad0ad98 263 Pfam PF00849 RNA pseudouridylate synthase 65 209 7.7E-18 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMGD1_RS02695 322ab196977ae74deef896b916562796 373 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 215 361 8.1E-55 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 SMGD1_RS02695 322ab196977ae74deef896b916562796 373 Gene3D G3DSA:3.90.550.10 4 203 1.2E-53 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMGD1_RS02695 322ab196977ae74deef896b916562796 373 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 6 200 8.1E-30 T 22-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 SMGD1_RS02695 322ab196977ae74deef896b916562796 373 SUPERFAMILY SSF53448 5 203 2.82E-43 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMGD1_RS02695 322ab196977ae74deef896b916562796 373 Pfam PF02542 YgbB family 214 365 2.4E-57 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 SMGD1_RS02695 322ab196977ae74deef896b916562796 373 Gene3D G3DSA:3.30.1330.50 212 366 3.9E-61 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 SMGD1_RS02695 322ab196977ae74deef896b916562796 373 SUPERFAMILY SSF69765 214 370 9.03E-59 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 SMGD1_RS02695 322ab196977ae74deef896b916562796 373 Hamap MF_01520 Bifunctional enzyme IspD/IspF [ispDF]. 2 368 35.457 T 22-04-2016 IPR026596 Bifunctional enzyme IspD/IspF KEGG: 00900+4.6.1.12+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056|UniPathway: UPA00056 SMGD1_RS02695 322ab196977ae74deef896b916562796 373 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 246 261 - T 22-04-2016 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 SMGD1_RS02695 322ab196977ae74deef896b916562796 373 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 212 367 30.915 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 SMGD1_RS02695 322ab196977ae74deef896b916562796 373 PANTHER PTHR32125 208 369 1.4E-38 T 22-04-2016 SMGD1_RS11155 2f000480ef0d653074128f5382e033ba 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 60 1.7E-13 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SMGD1_RS11155 2f000480ef0d653074128f5382e033ba 198 PANTHER PTHR30055 9 194 3.7E-23 T 22-04-2016 SMGD1_RS11155 2f000480ef0d653074128f5382e033ba 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 5.2E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SMGD1_RS11155 2f000480ef0d653074128f5382e033ba 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 5.2E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SMGD1_RS11155 2f000480ef0d653074128f5382e033ba 198 ProSitePatterns PS01081 TetR-type HTH domain signature. 26 57 - T 22-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site SMGD1_RS11155 2f000480ef0d653074128f5382e033ba 198 Gene3D G3DSA:1.10.357.10 9 193 3.5E-32 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SMGD1_RS11155 2f000480ef0d653074128f5382e033ba 198 SUPERFAMILY SSF46689 6 84 1.21E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SMGD1_RS11155 2f000480ef0d653074128f5382e033ba 198 SUPERFAMILY SSF48498 82 194 1.17E-8 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal SMGD1_RS07390 1e6dc6c2010d6fea0037d7a7d0d9dfc8 223 PANTHER PTHR26402 3 220 5.0E-54 T 22-04-2016 SMGD1_RS07390 1e6dc6c2010d6fea0037d7a7d0d9dfc8 223 Gene3D G3DSA:1.10.10.10 134 222 3.3E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMGD1_RS07390 1e6dc6c2010d6fea0037d7a7d0d9dfc8 223 SUPERFAMILY SSF52172 3 177 2.56E-33 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS07390 1e6dc6c2010d6fea0037d7a7d0d9dfc8 223 SMART SM00862 149 220 4.1E-14 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMGD1_RS07390 1e6dc6c2010d6fea0037d7a7d0d9dfc8 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 220 2.8E-15 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMGD1_RS07390 1e6dc6c2010d6fea0037d7a7d0d9dfc8 223 Pfam PF00072 Response regulator receiver domain 6 114 2.9E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS07390 1e6dc6c2010d6fea0037d7a7d0d9dfc8 223 Gene3D G3DSA:3.40.50.2300 2 120 3.5E-31 T 22-04-2016 SMGD1_RS07390 1e6dc6c2010d6fea0037d7a7d0d9dfc8 223 SMART SM00448 3 114 1.8E-31 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS00635 8baeece511d177effec729676b2af811 409 SMART SM00852 177 314 2.0E-30 T 22-04-2016 IPR001453 MoaB/Mog domain SMGD1_RS00635 8baeece511d177effec729676b2af811 409 Pfam PF03453 MoeA N-terminal region (domain I and II) 19 164 6.4E-28 T 22-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 SMGD1_RS00635 8baeece511d177effec729676b2af811 409 Gene3D G3DSA:2.40.340.10 335 394 1.7E-5 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 SMGD1_RS00635 8baeece511d177effec729676b2af811 409 Gene3D G3DSA:2.170.190.11 48 127 8.8E-24 T 22-04-2016 SMGD1_RS00635 8baeece511d177effec729676b2af811 409 SUPERFAMILY SSF53218 175 318 3.27E-37 T 22-04-2016 IPR001453 MoaB/Mog domain SMGD1_RS00635 8baeece511d177effec729676b2af811 409 SUPERFAMILY SSF63867 329 397 1.24E-8 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 SMGD1_RS00635 8baeece511d177effec729676b2af811 409 Pfam PF03454 MoeA C-terminal region (domain IV) 333 396 2.7E-7 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 SMGD1_RS00635 8baeece511d177effec729676b2af811 409 Gene3D G3DSA:3.90.105.10 128 159 2.7E-9 T 22-04-2016 SMGD1_RS00635 8baeece511d177effec729676b2af811 409 PANTHER PTHR10192 25 409 2.9E-103 T 22-04-2016 SMGD1_RS00635 8baeece511d177effec729676b2af811 409 SUPERFAMILY SSF63882 4 173 1.96E-43 T 22-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 SMGD1_RS00635 8baeece511d177effec729676b2af811 409 Gene3D G3DSA:3.40.980.10 160 319 5.3E-52 T 22-04-2016 IPR001453 MoaB/Mog domain SMGD1_RS00635 8baeece511d177effec729676b2af811 409 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 174 308 1.9E-30 T 22-04-2016 IPR001453 MoaB/Mog domain SMGD1_RS00635 8baeece511d177effec729676b2af811 409 Pfam PF00994 Probable molybdopterin binding domain 177 313 4.9E-24 T 22-04-2016 IPR001453 MoaB/Mog domain SMGD1_RS11675 420853a070a6186e886a0afd2418740b 96 Gene3D G3DSA:3.30.70.900 1 94 3.4E-31 T 22-04-2016 SMGD1_RS11675 420853a070a6186e886a0afd2418740b 96 PANTHER PTHR37832:SF1 1 96 2.4E-15 T 22-04-2016 SMGD1_RS11675 420853a070a6186e886a0afd2418740b 96 PANTHER PTHR37832 1 96 2.4E-15 T 22-04-2016 SMGD1_RS11675 420853a070a6186e886a0afd2418740b 96 Pfam PF07876 Stress responsive A/B Barrel Domain 2 95 2.1E-26 T 22-04-2016 IPR013097 Stress responsive alpha-beta barrel SMGD1_RS11675 420853a070a6186e886a0afd2418740b 96 SUPERFAMILY SSF54909 1 95 1.34E-25 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel SMGD1_RS11675 420853a070a6186e886a0afd2418740b 96 SMART SM00886 2 96 8.9E-33 T 22-04-2016 IPR013097 Stress responsive alpha-beta barrel SMGD1_RS07840 14c7b18662ca3548f041031ab899c15b 849 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 848 160.961 T 22-04-2016 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 SMGD1_RS07840 14c7b18662ca3548f041031ab899c15b 849 Gene3D G3DSA:3.30.930.10 2 234 1.1E-105 T 22-04-2016 SMGD1_RS07840 14c7b18662ca3548f041031ab899c15b 849 SUPERFAMILY SSF55186 544 696 5.89E-45 T 22-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 SMGD1_RS07840 14c7b18662ca3548f041031ab899c15b 849 SUPERFAMILY SSF55681 2 239 1.71E-97 T 22-04-2016 SMGD1_RS07840 14c7b18662ca3548f041031ab899c15b 849 SUPERFAMILY SSF101353 243 453 9.02E-55 T 22-04-2016 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7|Reactome: REACT_71 SMGD1_RS07840 14c7b18662ca3548f041031ab899c15b 849 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 2 827 6.8E-279 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 SMGD1_RS07840 14c7b18662ca3548f041031ab899c15b 849 PANTHER PTHR11777:SF9 2 849 0.0 T 22-04-2016 SMGD1_RS07840 14c7b18662ca3548f041031ab899c15b 849 SMART SM00863 640 683 4.1E-17 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 SMGD1_RS07840 14c7b18662ca3548f041031ab899c15b 849 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 640 683 1.1E-15 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 SMGD1_RS07840 14c7b18662ca3548f041031ab899c15b 849 Pfam PF02272 DHHA1 domain 779 837 6.1E-13 T 22-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 SMGD1_RS07840 14c7b18662ca3548f041031ab899c15b 849 PRINTS PR00980 Alanyl-tRNA synthetase signature 71 82 1.6E-30 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 SMGD1_RS07840 14c7b18662ca3548f041031ab899c15b 849 PRINTS PR00980 Alanyl-tRNA synthetase signature 268 284 1.6E-30 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 SMGD1_RS07840 14c7b18662ca3548f041031ab899c15b 849 PRINTS PR00980 Alanyl-tRNA synthetase signature 292 305 1.6E-30 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 SMGD1_RS07840 14c7b18662ca3548f041031ab899c15b 849 PRINTS PR00980 Alanyl-tRNA synthetase signature 193 204 1.6E-30 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 SMGD1_RS07840 14c7b18662ca3548f041031ab899c15b 849 PRINTS PR00980 Alanyl-tRNA synthetase signature 220 233 1.6E-30 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 SMGD1_RS07840 14c7b18662ca3548f041031ab899c15b 849 Pfam PF01411 tRNA synthetases class II (A) 2 543 5.2E-199 T 22-04-2016 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 SMGD1_RS07840 14c7b18662ca3548f041031ab899c15b 849 SUPERFAMILY SSF50447 445 540 1.87E-12 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain SMGD1_RS07840 14c7b18662ca3548f041031ab899c15b 849 PANTHER PTHR11777 2 849 0.0 T 22-04-2016 SMGD1_RS13980 5172d4a8425c2802ea0c39886a5a5cad 546 Pfam PF00924 Mechanosensitive ion channel 288 501 2.3E-38 T 22-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 SMGD1_RS13980 5172d4a8425c2802ea0c39886a5a5cad 546 Gene3D G3DSA:1.20.58.60 54 134 1.0E-4 T 22-04-2016 SMGD1_RS13980 5172d4a8425c2802ea0c39886a5a5cad 546 PANTHER PTHR30566 42 444 1.1E-15 T 22-04-2016 SMGD1_RS13980 5172d4a8425c2802ea0c39886a5a5cad 546 SUPERFAMILY SSF46966 37 119 5.44E-5 T 22-04-2016 SMGD1_RS13980 5172d4a8425c2802ea0c39886a5a5cad 546 SUPERFAMILY SSF50182 332 412 9.48E-7 T 22-04-2016 IPR010920 LSM domain SMGD1_RS13980 5172d4a8425c2802ea0c39886a5a5cad 546 PANTHER PTHR30566:SF14 42 444 1.1E-15 T 22-04-2016 SMGD1_RS13980 5172d4a8425c2802ea0c39886a5a5cad 546 Gene3D G3DSA:2.30.30.60 348 411 2.2E-6 T 22-04-2016 SMGD1_RS03360 3edb44e33ffbd01c9c24739029a3f877 804 Gene3D G3DSA:3.30.70.270 400 553 2.3E-21 T 22-04-2016 SMGD1_RS03360 3edb44e33ffbd01c9c24739029a3f877 804 SUPERFAMILY SSF55785 285 384 1.92E-31 T 22-04-2016 IPR000014 PAS domain SMGD1_RS03360 3edb44e33ffbd01c9c24739029a3f877 804 Pfam PF00990 Diguanylate cyclase, GGDEF domain 399 546 9.2E-18 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS03360 3edb44e33ffbd01c9c24739029a3f877 804 SMART SM00091 271 339 3.1E-5 T 22-04-2016 IPR000014 PAS domain SMGD1_RS03360 3edb44e33ffbd01c9c24739029a3f877 804 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 290 392 1.2E-22 T 22-04-2016 IPR000014 PAS domain SMGD1_RS03360 3edb44e33ffbd01c9c24739029a3f877 804 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 394 550 1.2E-17 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS03360 3edb44e33ffbd01c9c24739029a3f877 804 SMART SM00086 345 387 8.3E-10 T 22-04-2016 IPR001610 PAC motif SMGD1_RS03360 3edb44e33ffbd01c9c24739029a3f877 804 PANTHER PTHR33121 513 799 2.0E-43 T 22-04-2016 SMGD1_RS03360 3edb44e33ffbd01c9c24739029a3f877 804 PANTHER PTHR33121 3 8 2.0E-43 T 22-04-2016 SMGD1_RS03360 3edb44e33ffbd01c9c24739029a3f877 804 SUPERFAMILY SSF55073 403 549 1.96E-22 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS03360 3edb44e33ffbd01c9c24739029a3f877 804 PANTHER PTHR33121:SF10 513 799 2.0E-43 T 22-04-2016 SMGD1_RS03360 3edb44e33ffbd01c9c24739029a3f877 804 PANTHER PTHR33121:SF10 3 8 2.0E-43 T 22-04-2016 SMGD1_RS03360 3edb44e33ffbd01c9c24739029a3f877 804 Gene3D G3DSA:3.30.450.20 287 386 1.1E-32 T 22-04-2016 SMGD1_RS03360 3edb44e33ffbd01c9c24739029a3f877 804 Pfam PF13426 PAS domain 289 386 8.1E-20 T 22-04-2016 IPR000014 PAS domain SMGD1_RS03360 3edb44e33ffbd01c9c24739029a3f877 804 Pfam PF00563 EAL domain 569 796 1.3E-56 T 22-04-2016 IPR001633 EAL domain SMGD1_RS03360 3edb44e33ffbd01c9c24739029a3f877 804 Gene3D G3DSA:3.20.20.450 565 802 5.9E-67 T 22-04-2016 IPR001633 EAL domain SMGD1_RS03360 3edb44e33ffbd01c9c24739029a3f877 804 SMART SM00052 562 801 8.7E-55 T 22-04-2016 IPR001633 EAL domain SMGD1_RS03360 3edb44e33ffbd01c9c24739029a3f877 804 SUPERFAMILY SSF141868 569 801 1.03E-67 T 22-04-2016 IPR001633 EAL domain SMGD1_RS03360 3edb44e33ffbd01c9c24739029a3f877 804 SMART SM00267 387 550 1.0E-9 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS07495 c3a642199a428ca44050656bac0fa654 171 SUPERFAMILY SSF54364 8 80 1.44E-24 T 22-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 SMGD1_RS07495 c3a642199a428ca44050656bac0fa654 171 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 9 78 1.7E-25 T 22-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 SMGD1_RS07495 c3a642199a428ca44050656bac0fa654 171 ProSitePatterns PS00938 Initiation factor 3 signature. 60 73 - T 22-04-2016 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 SMGD1_RS07495 c3a642199a428ca44050656bac0fa654 171 Gene3D G3DSA:3.30.110.10 81 171 4.7E-30 T 22-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 SMGD1_RS07495 c3a642199a428ca44050656bac0fa654 171 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 2 171 25.326 T 22-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 SMGD1_RS07495 c3a642199a428ca44050656bac0fa654 171 Gene3D G3DSA:3.10.20.80 4 80 4.0E-29 T 22-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 SMGD1_RS07495 c3a642199a428ca44050656bac0fa654 171 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 9 171 1.6E-58 T 22-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 SMGD1_RS07495 c3a642199a428ca44050656bac0fa654 171 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 85 170 5.4E-31 T 22-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 SMGD1_RS07495 c3a642199a428ca44050656bac0fa654 171 SUPERFAMILY SSF55200 86 171 9.68E-29 T 22-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 SMGD1_RS07495 c3a642199a428ca44050656bac0fa654 171 PANTHER PTHR10938 3 171 4.6E-53 T 22-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 SMGD1_RS04940 a05459a7ce9f34424a58045818819989 191 Pfam PF00297 Ribosomal protein L3 98 159 3.8E-10 T 22-04-2016 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS04940 a05459a7ce9f34424a58045818819989 191 Gene3D G3DSA:4.10.960.10 88 150 3.3E-22 T 22-04-2016 SMGD1_RS04940 a05459a7ce9f34424a58045818819989 191 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 3 187 2.2E-49 T 22-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS04940 a05459a7ce9f34424a58045818819989 191 PANTHER PTHR11229 98 184 1.1E-33 T 22-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS04940 a05459a7ce9f34424a58045818819989 191 SUPERFAMILY SSF50447 3 187 1.32E-42 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain SMGD1_RS02055 604b3e985cb933c38ddd6e6329ca18e3 263 PANTHER PTHR24220:SF361 6 254 3.6E-113 T 22-04-2016 SMGD1_RS02055 604b3e985cb933c38ddd6e6329ca18e3 263 PANTHER PTHR24220 6 254 3.6E-113 T 22-04-2016 SMGD1_RS02055 604b3e985cb933c38ddd6e6329ca18e3 263 Pfam PF00005 ABC transporter 26 166 6.6E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMGD1_RS02055 604b3e985cb933c38ddd6e6329ca18e3 263 Gene3D G3DSA:3.40.50.300 3 216 1.5E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS02055 604b3e985cb933c38ddd6e6329ca18e3 263 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMGD1_RS02055 604b3e985cb933c38ddd6e6329ca18e3 263 SMART SM00382 34 216 1.9E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain SMGD1_RS02055 604b3e985cb933c38ddd6e6329ca18e3 263 SUPERFAMILY SSF52540 5 233 2.47E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS02055 604b3e985cb933c38ddd6e6329ca18e3 263 TIGRFAM TIGR01184 ntrCD: nitrate ABC transporter, ATP-binding proteins C and D 26 254 2.1E-104 T 22-04-2016 IPR005890 Nitrate transport ATP-binding subunit C/D GO:0015112|GO:0015706|GO:0016020 SMGD1_RS05690 f47ce3907cc941391e259f16696c1d2b 610 Pfam PF12848 ABC transporter 191 262 1.2E-14 T 22-04-2016 IPR032781 ABC-transporter extension domain SMGD1_RS05690 f47ce3907cc941391e259f16696c1d2b 610 SMART SM00382 308 474 6.9E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain SMGD1_RS05690 f47ce3907cc941391e259f16696c1d2b 610 SMART SM00382 26 200 3.3E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain SMGD1_RS05690 f47ce3907cc941391e259f16696c1d2b 610 Gene3D G3DSA:3.40.50.300 281 514 9.2E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS05690 f47ce3907cc941391e259f16696c1d2b 610 Gene3D G3DSA:3.40.50.300 1 236 6.9E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS05690 f47ce3907cc941391e259f16696c1d2b 610 SUPERFAMILY SSF52540 272 492 3.93E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS05690 f47ce3907cc941391e259f16696c1d2b 610 Pfam PF00005 ABC transporter 18 148 1.8E-25 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMGD1_RS05690 f47ce3907cc941391e259f16696c1d2b 610 Pfam PF00005 ABC transporter 300 430 4.3E-24 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMGD1_RS05690 f47ce3907cc941391e259f16696c1d2b 610 ProSitePatterns PS00211 ABC transporters family signature. 402 416 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMGD1_RS05690 f47ce3907cc941391e259f16696c1d2b 610 SUPERFAMILY SSF52540 2 196 8.88E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS05690 f47ce3907cc941391e259f16696c1d2b 610 PANTHER PTHR19211 1 526 1.3E-175 T 22-04-2016 SMGD1_RS09360 848c2d9fe1e74587c4bae6c4e4e8e085 851 SUPERFAMILY SSF141868 619 846 5.23E-58 T 22-04-2016 IPR001633 EAL domain SMGD1_RS09360 848c2d9fe1e74587c4bae6c4e4e8e085 851 Pfam PF00990 Diguanylate cyclase, GGDEF domain 271 432 9.9E-39 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS09360 848c2d9fe1e74587c4bae6c4e4e8e085 851 Pfam PF00990 Diguanylate cyclase, GGDEF domain 447 533 8.2E-7 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS09360 848c2d9fe1e74587c4bae6c4e4e8e085 851 SMART SM00448 11 129 1.2E-19 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS09360 848c2d9fe1e74587c4bae6c4e4e8e085 851 SMART SM00052 609 847 2.2E-38 T 22-04-2016 IPR001633 EAL domain SMGD1_RS09360 848c2d9fe1e74587c4bae6c4e4e8e085 851 Gene3D G3DSA:3.40.50.2300 8 125 2.5E-26 T 22-04-2016 SMGD1_RS09360 848c2d9fe1e74587c4bae6c4e4e8e085 851 Gene3D G3DSA:3.30.450.20 161 261 1.7E-21 T 22-04-2016 SMGD1_RS09360 848c2d9fe1e74587c4bae6c4e4e8e085 851 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 266 435 3.1E-41 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS09360 848c2d9fe1e74587c4bae6c4e4e8e085 851 SMART SM00267 259 436 1.3E-45 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS09360 848c2d9fe1e74587c4bae6c4e4e8e085 851 Pfam PF00563 EAL domain 616 842 5.1E-53 T 22-04-2016 IPR001633 EAL domain SMGD1_RS09360 848c2d9fe1e74587c4bae6c4e4e8e085 851 Pfam PF00072 Response regulator receiver domain 14 126 1.2E-18 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS09360 848c2d9fe1e74587c4bae6c4e4e8e085 851 SUPERFAMILY SSF55785 160 260 7.85E-22 T 22-04-2016 IPR000014 PAS domain SMGD1_RS09360 848c2d9fe1e74587c4bae6c4e4e8e085 851 Gene3D G3DSA:3.30.70.270 272 435 3.8E-40 T 22-04-2016 SMGD1_RS09360 848c2d9fe1e74587c4bae6c4e4e8e085 851 Gene3D G3DSA:3.30.70.270 448 570 5.9E-6 T 22-04-2016 SMGD1_RS09360 848c2d9fe1e74587c4bae6c4e4e8e085 851 Pfam PF13426 PAS domain 162 261 4.9E-12 T 22-04-2016 IPR000014 PAS domain SMGD1_RS09360 848c2d9fe1e74587c4bae6c4e4e8e085 851 SUPERFAMILY SSF55073 452 598 5.49E-8 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS09360 848c2d9fe1e74587c4bae6c4e4e8e085 851 PANTHER PTHR33121 563 842 1.8E-28 T 22-04-2016 SMGD1_RS09360 848c2d9fe1e74587c4bae6c4e4e8e085 851 PANTHER PTHR33121 54 344 1.8E-28 T 22-04-2016 SMGD1_RS09360 848c2d9fe1e74587c4bae6c4e4e8e085 851 Gene3D G3DSA:3.20.20.450 618 847 2.8E-57 T 22-04-2016 IPR001633 EAL domain SMGD1_RS09360 848c2d9fe1e74587c4bae6c4e4e8e085 851 SUPERFAMILY SSF52172 9 141 3.56E-26 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS09360 848c2d9fe1e74587c4bae6c4e4e8e085 851 SUPERFAMILY SSF55073 275 435 2.04E-36 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS09360 848c2d9fe1e74587c4bae6c4e4e8e085 851 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 157 267 6.7E-18 T 22-04-2016 IPR000014 PAS domain SMGD1_RS13895 5aa26d370eae09998efeedc88a46db25 646 SUPERFAMILY SSF55073 250 392 7.45E-24 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS13895 5aa26d370eae09998efeedc88a46db25 646 Pfam PF00563 EAL domain 413 640 5.2E-62 T 22-04-2016 IPR001633 EAL domain SMGD1_RS13895 5aa26d370eae09998efeedc88a46db25 646 SMART SM00267 234 394 3.7E-18 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS13895 5aa26d370eae09998efeedc88a46db25 646 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 242 390 3.7E-18 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS13895 5aa26d370eae09998efeedc88a46db25 646 PANTHER PTHR33121:SF10 399 644 2.9E-56 T 22-04-2016 SMGD1_RS13895 5aa26d370eae09998efeedc88a46db25 646 Gene3D G3DSA:3.20.20.450 409 642 8.8E-63 T 22-04-2016 IPR001633 EAL domain SMGD1_RS13895 5aa26d370eae09998efeedc88a46db25 646 SUPERFAMILY SSF141868 412 641 1.96E-62 T 22-04-2016 IPR001633 EAL domain SMGD1_RS13895 5aa26d370eae09998efeedc88a46db25 646 Pfam PF00990 Diguanylate cyclase, GGDEF domain 246 389 4.5E-22 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS13895 5aa26d370eae09998efeedc88a46db25 646 SMART SM00052 406 645 3.3E-53 T 22-04-2016 IPR001633 EAL domain SMGD1_RS13895 5aa26d370eae09998efeedc88a46db25 646 PANTHER PTHR33121 399 644 2.9E-56 T 22-04-2016 SMGD1_RS13895 5aa26d370eae09998efeedc88a46db25 646 Gene3D G3DSA:3.30.70.270 247 399 5.2E-24 T 22-04-2016 SMGD1_RS00080 27e053d589ee50a083b68869cce62d66 325 PANTHER PTHR24423 100 323 2.5E-33 T 22-04-2016 SMGD1_RS00080 27e053d589ee50a083b68869cce62d66 325 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 222 320 1.8E-10 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS00080 27e053d589ee50a083b68869cce62d66 325 Gene3D G3DSA:1.10.287.130 110 177 2.2E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS00080 27e053d589ee50a083b68869cce62d66 325 Pfam PF00512 His Kinase A (phospho-acceptor) domain 118 177 1.8E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS00080 27e053d589ee50a083b68869cce62d66 325 SUPERFAMILY SSF55874 196 316 1.31E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS00080 27e053d589ee50a083b68869cce62d66 325 SUPERFAMILY SSF47384 109 177 1.35E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS00080 27e053d589ee50a083b68869cce62d66 325 SMART SM00387 221 325 4.0E-15 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS00080 27e053d589ee50a083b68869cce62d66 325 Gene3D G3DSA:3.30.565.10 206 320 1.6E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS00080 27e053d589ee50a083b68869cce62d66 325 SMART SM00388 117 181 1.7E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS00080 27e053d589ee50a083b68869cce62d66 325 PRINTS PR00344 Bacterial sensor protein C-terminal signature 278 288 1.8E-5 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS00080 27e053d589ee50a083b68869cce62d66 325 PRINTS PR00344 Bacterial sensor protein C-terminal signature 289 307 1.8E-5 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS11240 ae057c94dc9fdcce833ff59e5f4f714d 577 ProSitePatterns PS00508 Nickel-dependent hydrogenases large subunit signature 2. 545 554 - T 22-04-2016 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 SMGD1_RS11240 ae057c94dc9fdcce833ff59e5f4f714d 577 Pfam PF00374 Nickel-dependent hydrogenase 40 554 7.8E-208 T 22-04-2016 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 SMGD1_RS11240 ae057c94dc9fdcce833ff59e5f4f714d 577 PANTHER PTHR11993:SF11 360 558 2.0E-167 T 22-04-2016 SMGD1_RS11240 ae057c94dc9fdcce833ff59e5f4f714d 577 PANTHER PTHR11993:SF11 189 253 2.0E-167 T 22-04-2016 SMGD1_RS11240 ae057c94dc9fdcce833ff59e5f4f714d 577 PANTHER PTHR11993:SF11 1 117 2.0E-167 T 22-04-2016 SMGD1_RS11240 ae057c94dc9fdcce833ff59e5f4f714d 577 SUPERFAMILY SSF56762 1 554 1.7E-165 T 22-04-2016 IPR029014 NiFe hydrogenase-like SMGD1_RS11240 ae057c94dc9fdcce833ff59e5f4f714d 577 Gene3D G3DSA:1.10.645.10 1 554 3.6E-196 T 22-04-2016 IPR029014 NiFe hydrogenase-like SMGD1_RS11240 ae057c94dc9fdcce833ff59e5f4f714d 577 PANTHER PTHR11993 360 558 2.0E-167 T 22-04-2016 SMGD1_RS11240 ae057c94dc9fdcce833ff59e5f4f714d 577 PANTHER PTHR11993 189 253 2.0E-167 T 22-04-2016 SMGD1_RS11240 ae057c94dc9fdcce833ff59e5f4f714d 577 PANTHER PTHR11993 1 117 2.0E-167 T 22-04-2016 SMGD1_RS11240 ae057c94dc9fdcce833ff59e5f4f714d 577 ProSitePatterns PS00507 Nickel-dependent hydrogenases large subunit signature 1. 40 65 - T 22-04-2016 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 SMGD1_RS11840 60fa3403a7c695c5fae71ff01697bd65 189 PANTHER PTHR30446:SF0 2 189 8.8E-47 T 22-04-2016 SMGD1_RS11840 60fa3403a7c695c5fae71ff01697bd65 189 PANTHER PTHR30446 2 189 8.8E-47 T 22-04-2016 SMGD1_RS11840 60fa3403a7c695c5fae71ff01697bd65 189 TIGRFAM TIGR00615 recR: recombination protein RecR 6 186 1.0E-53 T 22-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 SMGD1_RS11840 60fa3403a7c695c5fae71ff01697bd65 189 Hamap MF_00017 Recombination protein RecR [recR]. 1 189 58.21 T 22-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 SMGD1_RS11840 60fa3403a7c695c5fae71ff01697bd65 189 ProSitePatterns PS01300 RecR protein signature. 58 79 - T 22-04-2016 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 SMGD1_RS11840 60fa3403a7c695c5fae71ff01697bd65 189 Pfam PF02132 RecR protein 43 79 4.1E-11 T 22-04-2016 IPR023628 Recombination protein RecR, C4-type zinc finger SMGD1_RS11840 60fa3403a7c695c5fae71ff01697bd65 189 SUPERFAMILY SSF111304 6 189 3.14E-55 T 22-04-2016 IPR023627 Recombination protein RecR SMGD1_RS07835 54b4b3e1dd65a2178b1e63b75e5dd3dc 146 Pfam PF04463 Protein of unknown function (DUF523) 5 142 2.5E-27 T 22-04-2016 IPR007553 Domain of unknown function DUF523 SMGD1_RS07835 54b4b3e1dd65a2178b1e63b75e5dd3dc 146 PANTHER PTHR30087 1 142 2.4E-24 T 22-04-2016 SMGD1_RS09050 caee978a98423375d5a9d59de65efe94 187 PANTHER PTHR30353 1 185 1.1E-22 T 22-04-2016 IPR032818 DedA family SMGD1_RS09050 caee978a98423375d5a9d59de65efe94 187 Pfam PF09335 SNARE associated Golgi protein 26 140 1.0E-13 T 22-04-2016 IPR032816 SNARE associated Golgi protein SMGD1_RS13675 4878f32a3d8828c4dbf6bcc1ee99d79c 355 PANTHER PTHR11835:SF35 1 353 9.9E-198 T 22-04-2016 SMGD1_RS13675 4878f32a3d8828c4dbf6bcc1ee99d79c 355 SMART SM01329 5 349 2.3E-201 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 SMGD1_RS13675 4878f32a3d8828c4dbf6bcc1ee99d79c 355 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 5 348 6.0E-133 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 SMGD1_RS13675 4878f32a3d8828c4dbf6bcc1ee99d79c 355 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 5 346 1.1E-154 T 22-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 SMGD1_RS13675 4878f32a3d8828c4dbf6bcc1ee99d79c 355 PANTHER PTHR11835 1 353 9.9E-198 T 22-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 SMGD1_RS13675 4878f32a3d8828c4dbf6bcc1ee99d79c 355 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 240 259 - T 22-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 SMGD1_RS13675 4878f32a3d8828c4dbf6bcc1ee99d79c 355 Gene3D G3DSA:3.40.718.10 1 352 1.3E-129 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 SMGD1_RS13675 4878f32a3d8828c4dbf6bcc1ee99d79c 355 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 4 353 50.385 T 22-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 SMGD1_RS13675 4878f32a3d8828c4dbf6bcc1ee99d79c 355 SUPERFAMILY SSF53659 4 353 8.64E-124 T 22-04-2016 SMGD1_RS07570 4c6722bb3973961eab5bc4b459519817 307 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 69 115 1.1E-15 T 22-04-2016 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal UniPathway: UPA00705 SMGD1_RS07570 4c6722bb3973961eab5bc4b459519817 307 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 234 302 3.8E-10 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS07570 4c6722bb3973961eab5bc4b459519817 307 PANTHER PTHR33751 56 306 1.9E-14 T 22-04-2016 SMGD1_RS07570 4c6722bb3973961eab5bc4b459519817 307 PANTHER PTHR33751:SF1 56 306 1.9E-14 T 22-04-2016 SMGD1_RS07570 4c6722bb3973961eab5bc4b459519817 307 Gene3D G3DSA:1.10.760.10 91 229 2.8E-12 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS07570 4c6722bb3973961eab5bc4b459519817 307 Pfam PF00034 Cytochrome c 144 228 8.0E-5 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS07570 4c6722bb3973961eab5bc4b459519817 307 SUPERFAMILY SSF46626 86 229 1.1E-13 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS07570 4c6722bb3973961eab5bc4b459519817 307 Gene3D G3DSA:1.10.760.10 233 306 1.4E-13 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS07570 4c6722bb3973961eab5bc4b459519817 307 SUPERFAMILY SSF46626 234 306 1.4E-15 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS07915 43398dcc59cd7fe3d726a50790683304 351 SUPERFAMILY SSF55874 206 347 1.96E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS07915 43398dcc59cd7fe3d726a50790683304 351 Gene3D G3DSA:1.10.287.130 147 192 2.8E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS07915 43398dcc59cd7fe3d726a50790683304 351 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 249 346 2.2E-14 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS07915 43398dcc59cd7fe3d726a50790683304 351 SUPERFAMILY SSF47384 138 204 8.63E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS07915 43398dcc59cd7fe3d726a50790683304 351 Gene3D G3DSA:3.30.565.10 193 347 1.4E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS07915 43398dcc59cd7fe3d726a50790683304 351 PRINTS PR00344 Bacterial sensor protein C-terminal signature 309 327 1.3E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS07915 43398dcc59cd7fe3d726a50790683304 351 PRINTS PR00344 Bacterial sensor protein C-terminal signature 282 296 1.3E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS07915 43398dcc59cd7fe3d726a50790683304 351 PRINTS PR00344 Bacterial sensor protein C-terminal signature 333 346 1.3E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS07915 43398dcc59cd7fe3d726a50790683304 351 PRINTS PR00344 Bacterial sensor protein C-terminal signature 298 308 1.3E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS07915 43398dcc59cd7fe3d726a50790683304 351 SMART SM00387 247 349 1.8E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS07915 43398dcc59cd7fe3d726a50790683304 351 SMART SM00388 147 215 0.0012 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS07915 43398dcc59cd7fe3d726a50790683304 351 PANTHER PTHR24423 149 345 1.3E-31 T 22-04-2016 SMGD1_RS07915 43398dcc59cd7fe3d726a50790683304 351 Pfam PF00512 His Kinase A (phospho-acceptor) domain 149 200 2.1E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS10610 4cbf3531ee75a48069e02e89ae73fe41 598 Gene3D G3DSA:3.30.70.270 441 594 1.1E-47 T 22-04-2016 SMGD1_RS10610 4cbf3531ee75a48069e02e89ae73fe41 598 SMART SM00267 428 596 2.6E-59 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS10610 4cbf3531ee75a48069e02e89ae73fe41 598 SMART SM00091 193 261 1.1E-7 T 22-04-2016 IPR000014 PAS domain SMGD1_RS10610 4cbf3531ee75a48069e02e89ae73fe41 598 SMART SM00091 319 384 0.79 T 22-04-2016 IPR000014 PAS domain SMGD1_RS10610 4cbf3531ee75a48069e02e89ae73fe41 598 SUPERFAMILY SSF55785 330 429 1.66E-28 T 22-04-2016 IPR000014 PAS domain SMGD1_RS10610 4cbf3531ee75a48069e02e89ae73fe41 598 SMART SM00086 268 311 3.0E-6 T 22-04-2016 IPR001610 PAC motif SMGD1_RS10610 4cbf3531ee75a48069e02e89ae73fe41 598 SMART SM00086 390 432 3.6E-9 T 22-04-2016 IPR001610 PAC motif SMGD1_RS10610 4cbf3531ee75a48069e02e89ae73fe41 598 Pfam PF03924 CHASE domain 9 107 6.9E-25 T 22-04-2016 IPR006189 CHASE domain SMGD1_RS10610 4cbf3531ee75a48069e02e89ae73fe41 598 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 324 437 1.2E-21 T 22-04-2016 IPR000014 PAS domain SMGD1_RS10610 4cbf3531ee75a48069e02e89ae73fe41 598 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 190 316 1.2E-14 T 22-04-2016 IPR000014 PAS domain SMGD1_RS10610 4cbf3531ee75a48069e02e89ae73fe41 598 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 436 595 1.9E-51 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS10610 4cbf3531ee75a48069e02e89ae73fe41 598 Pfam PF08447 PAS fold 216 304 5.9E-23 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 SMGD1_RS10610 4cbf3531ee75a48069e02e89ae73fe41 598 Pfam PF13426 PAS domain 333 431 4.4E-16 T 22-04-2016 IPR000014 PAS domain SMGD1_RS10610 4cbf3531ee75a48069e02e89ae73fe41 598 SMART SM01079 4 109 2.0E-4 T 22-04-2016 IPR006189 CHASE domain SMGD1_RS10610 4cbf3531ee75a48069e02e89ae73fe41 598 Gene3D G3DSA:3.30.450.20 183 330 1.8E-37 T 22-04-2016 SMGD1_RS10610 4cbf3531ee75a48069e02e89ae73fe41 598 SUPERFAMILY SSF55785 199 313 2.79E-23 T 22-04-2016 IPR000014 PAS domain SMGD1_RS10610 4cbf3531ee75a48069e02e89ae73fe41 598 SUPERFAMILY SSF55073 444 594 4.39E-46 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS10610 4cbf3531ee75a48069e02e89ae73fe41 598 PANTHER PTHR24423 538 546 2.3E-28 T 22-04-2016 SMGD1_RS10610 4cbf3531ee75a48069e02e89ae73fe41 598 PANTHER PTHR24423 191 436 2.3E-28 T 22-04-2016 SMGD1_RS10610 4cbf3531ee75a48069e02e89ae73fe41 598 Gene3D G3DSA:3.30.450.20 331 431 5.0E-28 T 22-04-2016 SMGD1_RS10610 4cbf3531ee75a48069e02e89ae73fe41 598 Pfam PF00990 Diguanylate cyclase, GGDEF domain 440 592 1.2E-45 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS05275 b9150776cd3a1a863bf0925cb202e7b3 279 PANTHER PTHR30244:SF1 3 279 4.0E-85 T 22-04-2016 SMGD1_RS05275 b9150776cd3a1a863bf0925cb202e7b3 279 PRINTS PR00207 Flagellin signature 76 95 5.4E-20 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 SMGD1_RS05275 b9150776cd3a1a863bf0925cb202e7b3 279 PRINTS PR00207 Flagellin signature 111 134 5.4E-20 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 SMGD1_RS05275 b9150776cd3a1a863bf0925cb202e7b3 279 PRINTS PR00207 Flagellin signature 37 54 5.4E-20 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 SMGD1_RS05275 b9150776cd3a1a863bf0925cb202e7b3 279 Gene3D G3DSA:1.20.1330.10 55 235 6.2E-48 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SMGD1_RS05275 b9150776cd3a1a863bf0925cb202e7b3 279 SUPERFAMILY SSF64518 1 279 3.27E-75 T 22-04-2016 SMGD1_RS05275 b9150776cd3a1a863bf0925cb202e7b3 279 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 8.0E-38 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SMGD1_RS05275 b9150776cd3a1a863bf0925cb202e7b3 279 Pfam PF00700 Bacterial flagellin C-terminal helical region 196 278 7.8E-26 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SMGD1_RS05275 b9150776cd3a1a863bf0925cb202e7b3 279 PANTHER PTHR30244 3 279 4.0E-85 T 22-04-2016 SMGD1_RS00200 2c029f12b38dfcbafff0bc5d6ae51fb4 276 SUPERFAMILY SSF53335 10 258 8.01E-42 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS00200 2c029f12b38dfcbafff0bc5d6ae51fb4 276 PANTHER PTHR18895:SF64 22 275 1.2E-57 T 22-04-2016 SMGD1_RS00200 2c029f12b38dfcbafff0bc5d6ae51fb4 276 Gene3D G3DSA:1.10.8.10 7 86 6.4E-14 T 22-04-2016 SMGD1_RS00200 2c029f12b38dfcbafff0bc5d6ae51fb4 276 Pfam PF05175 Methyltransferase small domain 106 193 5.7E-12 T 22-04-2016 IPR007848 Methyltransferase small domain GO:0008168 SMGD1_RS00200 2c029f12b38dfcbafff0bc5d6ae51fb4 276 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 16 273 6.9E-61 T 22-04-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 SMGD1_RS00200 2c029f12b38dfcbafff0bc5d6ae51fb4 276 Gene3D G3DSA:3.40.50.150 89 274 1.4E-46 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS00200 2c029f12b38dfcbafff0bc5d6ae51fb4 276 PANTHER PTHR18895 22 275 1.2E-57 T 22-04-2016 SMGD1_RS00200 2c029f12b38dfcbafff0bc5d6ae51fb4 276 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 185 191 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 SMGD1_RS00200 2c029f12b38dfcbafff0bc5d6ae51fb4 276 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 28 271 5.2E-62 T 22-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 SMGD1_RS04855 1297231efec70e87a1004e3ddc1aa95b 146 ProSitePatterns PS00585 Ribosomal protein S5 signature. 25 57 - T 22-04-2016 IPR018192 Ribosomal protein S5, N-terminal, conserved site SMGD1_RS04855 1297231efec70e87a1004e3ddc1aa95b 146 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 146 30.321 T 22-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 SMGD1_RS04855 1297231efec70e87a1004e3ddc1aa95b 146 Gene3D G3DSA:3.30.160.20 6 69 1.9E-29 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain SMGD1_RS04855 1297231efec70e87a1004e3ddc1aa95b 146 SUPERFAMILY SSF54211 77 144 7.08E-23 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SMGD1_RS04855 1297231efec70e87a1004e3ddc1aa95b 146 PANTHER PTHR13718 6 145 4.3E-63 T 22-04-2016 IPR000851 Ribosomal protein S5 GO:0003735|GO:0005840|GO:0006412 SMGD1_RS04855 1297231efec70e87a1004e3ddc1aa95b 146 SUPERFAMILY SSF54768 3 72 5.02E-23 T 22-04-2016 SMGD1_RS04855 1297231efec70e87a1004e3ddc1aa95b 146 Pfam PF03719 Ribosomal protein S5, C-terminal domain 84 145 1.5E-26 T 22-04-2016 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 SMGD1_RS04855 1297231efec70e87a1004e3ddc1aa95b 146 Gene3D G3DSA:3.30.230.10 73 144 2.6E-30 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SMGD1_RS04855 1297231efec70e87a1004e3ddc1aa95b 146 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 6 145 1.3E-62 T 22-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 SMGD1_RS04855 1297231efec70e87a1004e3ddc1aa95b 146 Pfam PF00333 Ribosomal protein S5, N-terminal domain 8 71 8.5E-28 T 22-04-2016 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 SMGD1_RS00660 a7c6870c5725ab35f441a9d0d6f1e6b8 668 SMART SM00267 284 453 1.2E-7 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS00660 a7c6870c5725ab35f441a9d0d6f1e6b8 668 SUPERFAMILY SSF55073 300 404 3.37E-19 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS00660 a7c6870c5725ab35f441a9d0d6f1e6b8 668 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 296 408 2.4E-16 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS00660 a7c6870c5725ab35f441a9d0d6f1e6b8 668 Gene3D G3DSA:3.30.70.270 296 404 4.1E-19 T 22-04-2016 SMGD1_RS00660 a7c6870c5725ab35f441a9d0d6f1e6b8 668 Pfam PF00990 Diguanylate cyclase, GGDEF domain 296 406 6.5E-18 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS13855 3e9a4849a6f9c36b85fbe44e263d56a0 166 SUPERFAMILY SSF53098 9 147 2.02E-18 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMGD1_RS13855 3e9a4849a6f9c36b85fbe44e263d56a0 166 Gene3D G3DSA:3.30.420.10 4 149 6.0E-19 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMGD1_RS13855 3e9a4849a6f9c36b85fbe44e263d56a0 166 Pfam PF00075 RNase H 10 149 5.2E-14 T 22-04-2016 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 SMGD1_RS05170 5dce935c9f28af7e2e8f3951609fa920 412 SUPERFAMILY SSF103473 2 409 4.19E-31 T 22-04-2016 IPR020846 Major facilitator superfamily domain SMGD1_RS05170 5dce935c9f28af7e2e8f3951609fa920 412 Pfam PF07690 Major Facilitator Superfamily 5 370 6.4E-15 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SMGD1_RS05170 5dce935c9f28af7e2e8f3951609fa920 412 PANTHER PTHR23514 320 408 4.4E-133 T 22-04-2016 SMGD1_RS05170 5dce935c9f28af7e2e8f3951609fa920 412 PANTHER PTHR23514 1 302 4.4E-133 T 22-04-2016 SMGD1_RS05170 5dce935c9f28af7e2e8f3951609fa920 412 PANTHER PTHR23514:SF10 320 408 4.4E-133 T 22-04-2016 SMGD1_RS05170 5dce935c9f28af7e2e8f3951609fa920 412 PANTHER PTHR23514:SF10 1 302 4.4E-133 T 22-04-2016 SMGD1_RS05170 5dce935c9f28af7e2e8f3951609fa920 412 TIGRFAM TIGR01272 gluP: glucose/galactose transporter WARNING 81 402 1.8E-68 T 22-04-2016 IPR005964 Bacterial glucose/galactose transporter GO:0005354|GO:0005355|GO:0009276|GO:0015757|GO:0015758|GO:0016021 SMGD1_RS05170 5dce935c9f28af7e2e8f3951609fa920 412 Gene3D G3DSA:1.20.1250.20 3 196 2.8E-11 T 22-04-2016 SMGD1_RS05170 5dce935c9f28af7e2e8f3951609fa920 412 Gene3D G3DSA:1.20.1250.20 210 409 2.2E-7 T 22-04-2016 SMGD1_RS14415 c43b5eb749bc8af901f97c52844c92f0 203 PANTHER PTHR26402:SF151 64 200 2.0E-13 T 22-04-2016 SMGD1_RS14415 c43b5eb749bc8af901f97c52844c92f0 203 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 162 178 2.8E-9 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMGD1_RS14415 c43b5eb749bc8af901f97c52844c92f0 203 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 178 190 2.8E-9 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMGD1_RS14415 c43b5eb749bc8af901f97c52844c92f0 203 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 148 162 2.8E-9 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMGD1_RS14415 c43b5eb749bc8af901f97c52844c92f0 203 SUPERFAMILY SSF46894 140 200 1.56E-15 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SMGD1_RS14415 c43b5eb749bc8af901f97c52844c92f0 203 Pfam PF00196 Bacterial regulatory proteins, luxR family 147 199 2.4E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMGD1_RS14415 c43b5eb749bc8af901f97c52844c92f0 203 PANTHER PTHR26402 64 200 2.0E-13 T 22-04-2016 SMGD1_RS14415 c43b5eb749bc8af901f97c52844c92f0 203 Gene3D G3DSA:1.10.10.10 112 200 2.4E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMGD1_RS14415 c43b5eb749bc8af901f97c52844c92f0 203 SMART SM00421 145 202 3.8E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMGD1_RS10505 1fed04445f8553e197e3faa4a170d02b 696 Gene3D G3DSA:1.10.287.560 310 372 4.1E-10 T 22-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 SMGD1_RS10505 1fed04445f8553e197e3faa4a170d02b 696 Pfam PF01584 CheW-like domain 563 691 1.0E-17 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SMGD1_RS10505 1fed04445f8553e197e3faa4a170d02b 696 SUPERFAMILY SSF47226 4 124 5.63E-27 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SMGD1_RS10505 1fed04445f8553e197e3faa4a170d02b 696 SMART SM01231 309 371 7.6E-5 T 22-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 SMGD1_RS10505 1fed04445f8553e197e3faa4a170d02b 696 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 419 557 4.2E-16 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS10505 1fed04445f8553e197e3faa4a170d02b 696 SMART SM00387 416 558 2.7E-24 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS10505 1fed04445f8553e197e3faa4a170d02b 696 SMART SM00260 550 690 5.9E-22 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SMGD1_RS10505 1fed04445f8553e197e3faa4a170d02b 696 PANTHER PTHR22617 1 691 4.6E-148 T 22-04-2016 SMGD1_RS10505 1fed04445f8553e197e3faa4a170d02b 696 Gene3D G3DSA:2.40.50.180 582 636 4.9E-7 T 22-04-2016 SMGD1_RS10505 1fed04445f8553e197e3faa4a170d02b 696 Gene3D G3DSA:2.30.30.40 645 690 6.2E-20 T 22-04-2016 SMGD1_RS10505 1fed04445f8553e197e3faa4a170d02b 696 Gene3D G3DSA:2.30.30.40 558 579 6.2E-20 T 22-04-2016 SMGD1_RS10505 1fed04445f8553e197e3faa4a170d02b 696 SUPERFAMILY SSF55874 370 561 3.14E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS10505 1fed04445f8553e197e3faa4a170d02b 696 Gene3D G3DSA:3.30.565.10 373 557 4.3E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS10505 1fed04445f8553e197e3faa4a170d02b 696 PANTHER PTHR22617:SF6 1 691 4.6E-148 T 22-04-2016 SMGD1_RS10505 1fed04445f8553e197e3faa4a170d02b 696 PRINTS PR00344 Bacterial sensor protein C-terminal signature 462 476 4.1E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS10505 1fed04445f8553e197e3faa4a170d02b 696 PRINTS PR00344 Bacterial sensor protein C-terminal signature 518 536 4.1E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS10505 1fed04445f8553e197e3faa4a170d02b 696 PRINTS PR00344 Bacterial sensor protein C-terminal signature 542 555 4.1E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS10505 1fed04445f8553e197e3faa4a170d02b 696 SMART SM00073 3 100 2.1E-20 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SMGD1_RS10505 1fed04445f8553e197e3faa4a170d02b 696 Gene3D G3DSA:1.20.120.160 3 136 1.6E-32 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SMGD1_RS10505 1fed04445f8553e197e3faa4a170d02b 696 SUPERFAMILY SSF47384 311 372 2.39E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS10505 1fed04445f8553e197e3faa4a170d02b 696 Pfam PF01627 Hpt domain 6 89 8.4E-16 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SMGD1_RS10505 1fed04445f8553e197e3faa4a170d02b 696 SUPERFAMILY SSF50341 557 690 1.83E-24 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SMGD1_RS01565 3dbc7094cbd51b541e7390bfb7bf55ba 487 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 28 133 1.9E-22 T 22-04-2016 IPR028261 Dihydroprymidine dehydrogenase domain II SMGD1_RS01565 3dbc7094cbd51b541e7390bfb7bf55ba 487 Gene3D G3DSA:3.50.50.60 392 472 1.1E-15 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS01565 3dbc7094cbd51b541e7390bfb7bf55ba 487 Gene3D G3DSA:3.50.50.60 148 243 2.4E-30 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS01565 3dbc7094cbd51b541e7390bfb7bf55ba 487 PRINTS PR00419 Adrenodoxin reductase family signature 289 303 2.9E-22 T 22-04-2016 SMGD1_RS01565 3dbc7094cbd51b541e7390bfb7bf55ba 487 PRINTS PR00419 Adrenodoxin reductase family signature 147 169 2.9E-22 T 22-04-2016 SMGD1_RS01565 3dbc7094cbd51b541e7390bfb7bf55ba 487 PRINTS PR00419 Adrenodoxin reductase family signature 170 183 2.9E-22 T 22-04-2016 SMGD1_RS01565 3dbc7094cbd51b541e7390bfb7bf55ba 487 PRINTS PR00419 Adrenodoxin reductase family signature 213 223 2.9E-22 T 22-04-2016 SMGD1_RS01565 3dbc7094cbd51b541e7390bfb7bf55ba 487 Gene3D G3DSA:1.10.1060.10 3 147 6.3E-36 T 22-04-2016 SMGD1_RS01565 3dbc7094cbd51b541e7390bfb7bf55ba 487 SUPERFAMILY SSF51971 381 477 2.35E-8 T 22-04-2016 SMGD1_RS01565 3dbc7094cbd51b541e7390bfb7bf55ba 487 PANTHER PTHR11938 28 469 6.3E-144 T 22-04-2016 SMGD1_RS01565 3dbc7094cbd51b541e7390bfb7bf55ba 487 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 146 458 7.6E-22 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS01565 3dbc7094cbd51b541e7390bfb7bf55ba 487 SUPERFAMILY SSF51971 144 404 3.65E-59 T 22-04-2016 SMGD1_RS01565 3dbc7094cbd51b541e7390bfb7bf55ba 487 Gene3D G3DSA:3.50.50.60 244 391 4.4E-38 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS01565 3dbc7094cbd51b541e7390bfb7bf55ba 487 SUPERFAMILY SSF46548 3 156 7.85E-34 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 SMGD1_RS01565 3dbc7094cbd51b541e7390bfb7bf55ba 487 TIGRFAM TIGR01317 GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 3 472 9.2E-195 T 22-04-2016 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 GO:0006537|GO:0016639|GO:0055114 SMGD1_RS01565 3dbc7094cbd51b541e7390bfb7bf55ba 487 PANTHER PTHR11938:SF75 28 469 6.3E-144 T 22-04-2016 SMGD1_RS06390 2444c71d1be6c5845355b82a9988c4e5 184 Gene3D G3DSA:2.30.30.40 115 183 7.1E-23 T 22-04-2016 SMGD1_RS06390 2444c71d1be6c5845355b82a9988c4e5 184 PANTHER PTHR30305 1 183 7.4E-67 T 22-04-2016 SMGD1_RS06390 2444c71d1be6c5845355b82a9988c4e5 184 PANTHER PTHR30305:SF2 1 183 7.4E-67 T 22-04-2016 SMGD1_RS06390 2444c71d1be6c5845355b82a9988c4e5 184 Pfam PF03831 PhnA domain 118 183 1.6E-24 T 22-04-2016 IPR013988 PhnA protein, C-terminal SMGD1_RS06390 2444c71d1be6c5845355b82a9988c4e5 184 SUPERFAMILY SSF82057 112 183 3.34E-21 T 22-04-2016 SMGD1_RS06390 2444c71d1be6c5845355b82a9988c4e5 184 SMART SM00782 6 51 6.2E-13 T 22-04-2016 IPR013991 PhnA protein N-terminal, proteobacterial SMGD1_RS03055 d1e149a3a810a8cdcbc2d9b99eb4c5c5 367 Gene3D G3DSA:1.10.287.950 227 365 2.2E-35 T 22-04-2016 SMGD1_RS03055 d1e149a3a810a8cdcbc2d9b99eb4c5c5 367 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 274 362 1.7E-33 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SMGD1_RS03055 d1e149a3a810a8cdcbc2d9b99eb4c5c5 367 PANTHER PTHR32089:SF34 286 351 1.8E-35 T 22-04-2016 SMGD1_RS03055 d1e149a3a810a8cdcbc2d9b99eb4c5c5 367 SMART SM00283 218 367 0.0014 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SMGD1_RS03055 d1e149a3a810a8cdcbc2d9b99eb4c5c5 367 SUPERFAMILY SSF58104 187 365 2.49E-41 T 22-04-2016 SMGD1_RS03055 d1e149a3a810a8cdcbc2d9b99eb4c5c5 367 PANTHER PTHR32089 286 351 1.8E-35 T 22-04-2016 SMGD1_RS06850 424b37a2cac8097fed6e4228687871b4 701 SUPERFAMILY SSF82866 201 360 3.14E-12 T 22-04-2016 SMGD1_RS06850 424b37a2cac8097fed6e4228687871b4 701 SUPERFAMILY SSF82866 578 696 2.09E-11 T 22-04-2016 SMGD1_RS06850 424b37a2cac8097fed6e4228687871b4 701 Gene3D G3DSA:1.20.1640.10 199 360 1.8E-7 T 22-04-2016 SMGD1_RS08510 932aadb5d4cab66e95289b4d4a675119 339 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 2 326 4.7E-76 T 22-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SMGD1_RS08510 932aadb5d4cab66e95289b4d4a675119 339 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 4 140 1.6E-29 T 22-04-2016 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SMGD1_RS08510 932aadb5d4cab66e95289b4d4a675119 339 Gene3D G3DSA:3.40.50.2000 2 172 1.7E-42 T 22-04-2016 SMGD1_RS08510 932aadb5d4cab66e95289b4d4a675119 339 PANTHER PTHR21015 1 339 6.5E-56 T 22-04-2016 SMGD1_RS08510 932aadb5d4cab66e95289b4d4a675119 339 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 3 338 28.112 T 22-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SMGD1_RS08510 932aadb5d4cab66e95289b4d4a675119 339 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 172 334 1.2E-34 T 22-04-2016 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SMGD1_RS08510 932aadb5d4cab66e95289b4d4a675119 339 SUPERFAMILY SSF53756 2 335 1.47E-80 T 22-04-2016 SMGD1_RS08510 932aadb5d4cab66e95289b4d4a675119 339 PANTHER PTHR21015:SF22 1 339 6.5E-56 T 22-04-2016 SMGD1_RS08510 932aadb5d4cab66e95289b4d4a675119 339 Gene3D G3DSA:3.40.50.2000 173 328 2.5E-27 T 22-04-2016 SMGD1_RS02780 d6297aeddb4aebcf3e37a975ac1def47 135 Gene3D G3DSA:3.40.250.10 32 130 2.2E-12 T 22-04-2016 IPR001763 Rhodanese-like domain SMGD1_RS02780 d6297aeddb4aebcf3e37a975ac1def47 135 Pfam PF00581 Rhodanese-like domain 34 121 1.2E-8 T 22-04-2016 IPR001763 Rhodanese-like domain SMGD1_RS02780 d6297aeddb4aebcf3e37a975ac1def47 135 SUPERFAMILY SSF52821 27 131 4.25E-12 T 22-04-2016 IPR001763 Rhodanese-like domain SMGD1_RS05215 95e648b0f1b5cde4d990ee7f701f06a3 280 PANTHER PTHR10366 3 277 1.3E-35 T 22-04-2016 SMGD1_RS05215 95e648b0f1b5cde4d990ee7f701f06a3 280 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 207 4.7E-26 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 SMGD1_RS05215 95e648b0f1b5cde4d990ee7f701f06a3 280 Gene3D G3DSA:3.40.50.720 2 234 2.8E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS05215 95e648b0f1b5cde4d990ee7f701f06a3 280 SUPERFAMILY SSF51735 4 277 3.56E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS06795 c8a4386110c4e9839f24b64ab09f0e8f 270 Pfam PF14358 Domain of unknown function (DUF4405) 10 76 1.3E-18 T 22-04-2016 IPR025517 Domain of unknown function DUF4405 SMGD1_RS06795 c8a4386110c4e9839f24b64ab09f0e8f 270 Gene3D G3DSA:1.20.950.20 13 90 1.2E-4 T 22-04-2016 SMGD1_RS12820 73ea969569c38edd870faf23ff824bf9 342 Pfam PF00925 GTP cyclohydrolase II 290 340 1.6E-7 T 22-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 SMGD1_RS12820 73ea969569c38edd870faf23ff824bf9 342 PIRSF PIRSF001259 3 293 1.6E-78 T 22-04-2016 SMGD1_RS12820 73ea969569c38edd870faf23ff824bf9 342 SUPERFAMILY SSF142695 210 341 6.28E-18 T 22-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 SMGD1_RS12820 73ea969569c38edd870faf23ff824bf9 342 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 9 198 9.4E-76 T 22-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SMGD1_RS12820 73ea969569c38edd870faf23ff824bf9 342 PANTHER PTHR21327:SF6 4 342 1.3E-97 T 22-04-2016 SMGD1_RS12820 73ea969569c38edd870faf23ff824bf9 342 PANTHER PTHR21327 4 342 1.3E-97 T 22-04-2016 SMGD1_RS12820 73ea969569c38edd870faf23ff824bf9 342 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 4 199 1.0E-71 T 22-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SMGD1_RS12820 73ea969569c38edd870faf23ff824bf9 342 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 2 203 36.754 T 22-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SMGD1_RS12820 73ea969569c38edd870faf23ff824bf9 342 SUPERFAMILY SSF55821 6 206 4.58E-76 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain SMGD1_RS12820 73ea969569c38edd870faf23ff824bf9 342 Gene3D G3DSA:3.90.870.10 3 208 1.4E-86 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain SMGD1_RS10850 882c2d9b82bafdee04350a282fa72196 224 Gene3D G3DSA:1.10.10.10 121 217 1.9E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMGD1_RS10850 882c2d9b82bafdee04350a282fa72196 224 SUPERFAMILY SSF52172 1 173 1.96E-32 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS10850 882c2d9b82bafdee04350a282fa72196 224 PANTHER PTHR26402:SF578 1 217 2.2E-58 T 22-04-2016 SMGD1_RS10850 882c2d9b82bafdee04350a282fa72196 224 SMART SM00448 1 112 2.1E-31 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS10850 882c2d9b82bafdee04350a282fa72196 224 Gene3D G3DSA:3.40.50.2300 1 117 2.8E-31 T 22-04-2016 SMGD1_RS10850 882c2d9b82bafdee04350a282fa72196 224 PANTHER PTHR26402 1 217 2.2E-58 T 22-04-2016 SMGD1_RS10850 882c2d9b82bafdee04350a282fa72196 224 SMART SM00862 142 217 7.2E-20 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMGD1_RS10850 882c2d9b82bafdee04350a282fa72196 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 143 217 3.8E-20 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMGD1_RS10850 882c2d9b82bafdee04350a282fa72196 224 Pfam PF00072 Response regulator receiver domain 3 113 4.9E-21 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS05270 a8af0e88a12eb2b2bd6d407a6c8de9e6 278 PANTHER PTHR30244:SF1 3 278 8.5E-82 T 22-04-2016 SMGD1_RS05270 a8af0e88a12eb2b2bd6d407a6c8de9e6 278 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 3.3E-36 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SMGD1_RS05270 a8af0e88a12eb2b2bd6d407a6c8de9e6 278 Pfam PF00700 Bacterial flagellin C-terminal helical region 194 277 5.3E-26 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SMGD1_RS05270 a8af0e88a12eb2b2bd6d407a6c8de9e6 278 Gene3D G3DSA:1.20.1330.10 55 234 3.3E-47 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SMGD1_RS05270 a8af0e88a12eb2b2bd6d407a6c8de9e6 278 SUPERFAMILY SSF64518 1 278 1.09E-73 T 22-04-2016 SMGD1_RS05270 a8af0e88a12eb2b2bd6d407a6c8de9e6 278 PANTHER PTHR30244 3 278 8.5E-82 T 22-04-2016 SMGD1_RS05270 a8af0e88a12eb2b2bd6d407a6c8de9e6 278 PRINTS PR00207 Flagellin signature 76 95 4.4E-20 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 SMGD1_RS05270 a8af0e88a12eb2b2bd6d407a6c8de9e6 278 PRINTS PR00207 Flagellin signature 111 134 4.4E-20 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 SMGD1_RS05270 a8af0e88a12eb2b2bd6d407a6c8de9e6 278 PRINTS PR00207 Flagellin signature 37 54 4.4E-20 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 SMGD1_RS00480 5ca6c82e6d9f39ac846d16329c2b2d81 204 Pfam PF03309 Type III pantothenate kinase 67 160 1.5E-12 T 22-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 SMGD1_RS00480 5ca6c82e6d9f39ac846d16329c2b2d81 204 Gene3D G3DSA:3.30.420.40 1 58 8.0E-22 T 22-04-2016 SMGD1_RS00480 5ca6c82e6d9f39ac846d16329c2b2d81 204 SUPERFAMILY SSF53067 1 81 1.88E-23 T 22-04-2016 SMGD1_RS00480 5ca6c82e6d9f39ac846d16329c2b2d81 204 Hamap MF_01274 Type III pantothenate kinase [coaX]. 1 203 14.51 T 22-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 SMGD1_RS00480 5ca6c82e6d9f39ac846d16329c2b2d81 204 PANTHER PTHR34265 68 199 1.5E-13 T 22-04-2016 SMGD1_RS00480 5ca6c82e6d9f39ac846d16329c2b2d81 204 SUPERFAMILY SSF53067 84 199 1.51E-24 T 22-04-2016 SMGD1_RS00480 5ca6c82e6d9f39ac846d16329c2b2d81 204 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 1 199 1.7E-21 T 22-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 SMGD1_RS00480 5ca6c82e6d9f39ac846d16329c2b2d81 204 Gene3D G3DSA:3.30.420.40 66 200 6.3E-33 T 22-04-2016 SMGD1_RS02655 682269480491642c8ad9d7cb68063ddc 399 Gene3D G3DSA:3.30.300.10 9 140 8.6E-29 T 22-04-2016 SMGD1_RS02655 682269480491642c8ad9d7cb68063ddc 399 Gene3D G3DSA:3.30.300.10 242 270 2.6E-12 T 22-04-2016 SMGD1_RS02655 682269480491642c8ad9d7cb68063ddc 399 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 2 107 8.7E-27 T 22-04-2016 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SMGD1_RS02655 682269480491642c8ad9d7cb68063ddc 399 PANTHER PTHR11964:SF1 2 394 1.4E-135 T 22-04-2016 SMGD1_RS02655 682269480491642c8ad9d7cb68063ddc 399 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 121 131 - T 22-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SMGD1_RS02655 682269480491642c8ad9d7cb68063ddc 399 Gene3D G3DSA:3.30.300.10 271 392 4.3E-46 T 22-04-2016 SMGD1_RS02655 682269480491642c8ad9d7cb68063ddc 399 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 247 388 1.8E-48 T 22-04-2016 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SMGD1_RS02655 682269480491642c8ad9d7cb68063ddc 399 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 3 396 3.4E-108 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SMGD1_RS02655 682269480491642c8ad9d7cb68063ddc 399 PANTHER PTHR11964 2 394 1.4E-135 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SMGD1_RS02655 682269480491642c8ad9d7cb68063ddc 399 Gene3D G3DSA:3.30.300.10 141 241 1.3E-20 T 22-04-2016 SMGD1_RS02655 682269480491642c8ad9d7cb68063ddc 399 SUPERFAMILY SSF55973 118 243 1.65E-30 T 22-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SMGD1_RS02655 682269480491642c8ad9d7cb68063ddc 399 SUPERFAMILY SSF55973 2 115 2.83E-29 T 22-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SMGD1_RS02655 682269480491642c8ad9d7cb68063ddc 399 SUPERFAMILY SSF55973 247 396 2.55E-49 T 22-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SMGD1_RS02655 682269480491642c8ad9d7cb68063ddc 399 Pfam PF02772 S-adenosylmethionine synthetase, central domain 120 242 5.1E-28 T 22-04-2016 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SMGD1_RS02655 682269480491642c8ad9d7cb68063ddc 399 PIRSF PIRSF000497 1 399 9.5E-131 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SMGD1_RS13530 b30519d185c6bd15a543703ec5fefa35 158 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 18 150 1.4E-12 T 22-04-2016 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 SMGD1_RS13530 b30519d185c6bd15a543703ec5fefa35 158 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 12 145 5.2E-11 T 22-04-2016 IPR010664 Lipopolysaccharide assembly, LptC-related SMGD1_RS13530 b30519d185c6bd15a543703ec5fefa35 158 Gene3D G3DSA:2.60.450.10 70 146 7.9E-8 T 22-04-2016 SMGD1_RS06725 b579a8b51a6418c1fb83c674eb4bb404 240 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 240 30.572 T 22-04-2016 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148 SMGD1_RS06725 b579a8b51a6418c1fb83c674eb4bb404 240 PANTHER PTHR34148:SF1 1 240 1.2E-37 T 22-04-2016 SMGD1_RS06725 b579a8b51a6418c1fb83c674eb4bb404 240 Pfam PF02654 Cobalamin-5-phosphate synthase 11 231 1.6E-44 T 22-04-2016 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148 SMGD1_RS06725 b579a8b51a6418c1fb83c674eb4bb404 240 PANTHER PTHR34148 1 240 1.2E-37 T 22-04-2016 SMGD1_RS07445 ba280f2687a2dcabbf8d5e01b71a1200 371 PANTHER PTHR32089 109 236 2.0E-43 T 22-04-2016 SMGD1_RS07445 ba280f2687a2dcabbf8d5e01b71a1200 371 Gene3D G3DSA:1.10.287.950 70 249 3.4E-45 T 22-04-2016 SMGD1_RS07445 ba280f2687a2dcabbf8d5e01b71a1200 371 PANTHER PTHR32089:SF28 109 236 2.0E-43 T 22-04-2016 SMGD1_RS07445 ba280f2687a2dcabbf8d5e01b71a1200 371 Pfam PF13682 Chemoreceptor zinc-binding domain 260 325 2.4E-11 T 22-04-2016 IPR025991 Chemoreceptor zinc-binding domain UniPathway: UPA00599 SMGD1_RS07445 ba280f2687a2dcabbf8d5e01b71a1200 371 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 170 199 4.2E-18 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SMGD1_RS07445 ba280f2687a2dcabbf8d5e01b71a1200 371 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 141 168 4.2E-18 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SMGD1_RS07445 ba280f2687a2dcabbf8d5e01b71a1200 371 SMART SM00283 45 264 3.2E-22 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SMGD1_RS07445 ba280f2687a2dcabbf8d5e01b71a1200 371 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 113 241 3.1E-34 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SMGD1_RS07445 ba280f2687a2dcabbf8d5e01b71a1200 371 SUPERFAMILY SSF58104 73 250 5.23E-46 T 22-04-2016 SMGD1_RS10080 3ba9e531e30e6ef49b6bda70924c3aa1 454 SMART SM00028 196 229 90.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMGD1_RS10080 3ba9e531e30e6ef49b6bda70924c3aa1 454 SMART SM00028 373 406 96.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMGD1_RS10080 3ba9e531e30e6ef49b6bda70924c3aa1 454 SMART SM00028 278 311 0.9 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMGD1_RS10080 3ba9e531e30e6ef49b6bda70924c3aa1 454 Gene3D G3DSA:1.25.40.10 71 296 3.8E-11 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS10080 3ba9e531e30e6ef49b6bda70924c3aa1 454 SUPERFAMILY SSF48452 198 410 7.59E-11 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS10080 3ba9e531e30e6ef49b6bda70924c3aa1 454 Gene3D G3DSA:1.25.40.10 297 312 1.3E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS10080 3ba9e531e30e6ef49b6bda70924c3aa1 454 Gene3D G3DSA:1.25.40.10 361 452 1.3E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS09115 c05f513b14f64fa5de0cf4eab0e42561 257 Pfam PF01936 NYN domain 9 142 5.2E-32 T 22-04-2016 IPR021139 NYN domain, limkain-b1-type SMGD1_RS09115 c05f513b14f64fa5de0cf4eab0e42561 257 PANTHER PTHR35811:SF1 1 257 2.9E-53 T 22-04-2016 SMGD1_RS09115 c05f513b14f64fa5de0cf4eab0e42561 257 Pfam PF12872 OST-HTH/LOTUS domain 185 248 2.4E-7 T 22-04-2016 IPR025605 OST-HTH/LOTUS domain SMGD1_RS09115 c05f513b14f64fa5de0cf4eab0e42561 257 Gene3D G3DSA:3.40.50.1010 2 145 1.6E-29 T 22-04-2016 IPR029060 PIN domain-like SMGD1_RS09115 c05f513b14f64fa5de0cf4eab0e42561 257 PANTHER PTHR35811 1 257 2.9E-53 T 22-04-2016 SMGD1_RS08695 62236454cf356c7d2f0a7bb35e3fd600 292 Gene3D G3DSA:3.40.50.2300 53 129 3.4E-5 T 22-04-2016 SMGD1_RS08695 62236454cf356c7d2f0a7bb35e3fd600 292 Pfam PF04392 ABC transporter substrate binding protein 55 290 2.9E-19 T 22-04-2016 IPR007487 ABC transporter, substrate-binding protein SMGD1_RS08695 62236454cf356c7d2f0a7bb35e3fd600 292 Gene3D G3DSA:3.40.50.2300 130 258 2.0E-19 T 22-04-2016 SMGD1_RS08695 62236454cf356c7d2f0a7bb35e3fd600 292 PANTHER PTHR35271 59 292 1.0E-20 T 22-04-2016 SMGD1_RS11165 83830821c61cf1d64309a1703cfe9ec0 250 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 21 227 1.4E-15 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SMGD1_RS11165 83830821c61cf1d64309a1703cfe9ec0 250 PANTHER PTHR30469:SF15 26 229 5.4E-30 T 22-04-2016 SMGD1_RS11165 83830821c61cf1d64309a1703cfe9ec0 250 PANTHER PTHR30469 26 229 5.4E-30 T 22-04-2016 SMGD1_RS11165 83830821c61cf1d64309a1703cfe9ec0 250 SUPERFAMILY SSF111369 26 222 2.22E-16 T 22-04-2016 SMGD1_RS11165 83830821c61cf1d64309a1703cfe9ec0 250 Gene3D G3DSA:2.40.50.100 38 64 5.2E-11 T 22-04-2016 SMGD1_RS11165 83830821c61cf1d64309a1703cfe9ec0 250 Gene3D G3DSA:2.40.50.100 137 160 5.2E-11 T 22-04-2016 SMGD1_RS11165 83830821c61cf1d64309a1703cfe9ec0 250 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 18 229 1.1E-38 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 SMGD1_RS11370 d1662e0f61dfa22c8292e2f1728960d8 280 SUPERFAMILY SSF109709 115 223 1.78E-30 T 22-04-2016 SMGD1_RS11370 d1662e0f61dfa22c8292e2f1728960d8 280 Pfam PF02195 ParB-like nuclease domain 33 121 5.6E-23 T 22-04-2016 IPR003115 ParB/Sulfiredoxin SMGD1_RS11370 d1662e0f61dfa22c8292e2f1728960d8 280 Gene3D G3DSA:3.90.1530.10 27 127 2.4E-33 T 22-04-2016 SMGD1_RS11370 d1662e0f61dfa22c8292e2f1728960d8 280 SMART SM00470 32 121 1.3E-29 T 22-04-2016 IPR003115 ParB/Sulfiredoxin SMGD1_RS11370 d1662e0f61dfa22c8292e2f1728960d8 280 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 30 205 8.5E-54 T 22-04-2016 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 SMGD1_RS11370 d1662e0f61dfa22c8292e2f1728960d8 280 PANTHER PTHR33375 6 243 9.1E-74 T 22-04-2016 SMGD1_RS11370 d1662e0f61dfa22c8292e2f1728960d8 280 SUPERFAMILY SSF110849 31 123 7.85E-25 T 22-04-2016 IPR003115 ParB/Sulfiredoxin SMGD1_RS11370 d1662e0f61dfa22c8292e2f1728960d8 280 PANTHER PTHR33375:SF3 6 243 9.1E-74 T 22-04-2016 SMGD1_RS13160 331af93805978ba597751825b9280f75 316 SUPERFAMILY SSF51161 29 306 1.77E-68 T 22-04-2016 IPR011004 Trimeric LpxA-like SMGD1_RS13160 331af93805978ba597751825b9280f75 316 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 7 314 6.1E-101 T 22-04-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 SMGD1_RS13160 331af93805978ba597751825b9280f75 316 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 2 315 31.884 T 22-04-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 SMGD1_RS13160 331af93805978ba597751825b9280f75 316 Gene3D G3DSA:2.160.10.10 200 300 1.8E-19 T 22-04-2016 SMGD1_RS13160 331af93805978ba597751825b9280f75 316 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 18 86 7.1E-18 T 22-04-2016 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 UniPathway: UPA00973 SMGD1_RS13160 331af93805978ba597751825b9280f75 316 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 100 133 5.1E-7 T 22-04-2016 IPR001451 Hexapeptide repeat SMGD1_RS13160 331af93805978ba597751825b9280f75 316 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 136 169 1.7E-8 T 22-04-2016 IPR001451 Hexapeptide repeat SMGD1_RS13160 331af93805978ba597751825b9280f75 316 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 213 242 2.3E-5 T 22-04-2016 IPR001451 Hexapeptide repeat SMGD1_RS13160 331af93805978ba597751825b9280f75 316 Gene3D G3DSA:2.160.10.10 99 199 1.1E-23 T 22-04-2016 SMGD1_RS13160 331af93805978ba597751825b9280f75 316 PANTHER PTHR22572 98 286 6.3E-51 T 22-04-2016 SMGD1_RS13160 331af93805978ba597751825b9280f75 316 PANTHER PTHR22572:SF117 98 286 6.3E-51 T 22-04-2016 SMGD1_RS01790 8f6def9fbbe044840273503f4249a956 147 Pfam PF09424 Yqey-like protein 5 146 1.7E-47 T 22-04-2016 IPR019004 Uncharacterised domain YOR215C, mitochondrial SMGD1_RS01790 8f6def9fbbe044840273503f4249a956 147 Gene3D G3DSA:1.10.1510.10 1 90 4.2E-26 T 22-04-2016 SMGD1_RS01790 8f6def9fbbe044840273503f4249a956 147 SUPERFAMILY SSF89095 1 146 1.2E-37 T 22-04-2016 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 SMGD1_RS01790 8f6def9fbbe044840273503f4249a956 147 Gene3D G3DSA:1.10.10.410 91 147 3.7E-21 T 22-04-2016 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal SMGD1_RS01790 8f6def9fbbe044840273503f4249a956 147 PANTHER PTHR28055 1 147 4.0E-43 T 22-04-2016 SMGD1_RS01790 8f6def9fbbe044840273503f4249a956 147 PANTHER PTHR28055:SF1 1 147 4.0E-43 T 22-04-2016 SMGD1_RS12110 1123f74271ca689f5d916f20cdae79de 598 SUPERFAMILY SSF51569 3 300 4.94E-53 T 22-04-2016 SMGD1_RS12110 1123f74271ca689f5d916f20cdae79de 598 SUPERFAMILY SSF89000 308 465 7.06E-37 T 22-04-2016 SMGD1_RS12110 1123f74271ca689f5d916f20cdae79de 598 Pfam PF00364 Biotin-requiring enzyme 538 597 7.1E-14 T 22-04-2016 IPR000089 Biotin/lipoyl attachment SMGD1_RS12110 1123f74271ca689f5d916f20cdae79de 598 Gene3D G3DSA:2.40.50.100 525 597 1.6E-20 T 22-04-2016 SMGD1_RS12110 1123f74271ca689f5d916f20cdae79de 598 Gene3D G3DSA:3.20.20.70 2 290 1.9E-67 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMGD1_RS12110 1123f74271ca689f5d916f20cdae79de 598 Pfam PF00682 HMGL-like 7 276 1.4E-13 T 22-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 SMGD1_RS12110 1123f74271ca689f5d916f20cdae79de 598 PANTHER PTHR18866 1 594 3.9E-53 T 22-04-2016 SMGD1_RS12110 1123f74271ca689f5d916f20cdae79de 598 SUPERFAMILY SSF51230 520 597 2.49E-18 T 22-04-2016 IPR011053 Single hybrid motif SMGD1_RS12110 1123f74271ca689f5d916f20cdae79de 598 Pfam PF02436 Conserved carboxylase domain 307 496 9.2E-38 T 22-04-2016 IPR003379 Carboxylase, conserved domain SMGD1_RS12110 1123f74271ca689f5d916f20cdae79de 598 PANTHER PTHR18866:SF109 1 594 3.9E-53 T 22-04-2016 SMGD1_RS13030 cd27baeed62ba628cf254c63e2a278e5 209 Pfam PF00881 Nitroreductase family 11 188 1.9E-31 T 22-04-2016 IPR029479 Nitroreductase SMGD1_RS13030 cd27baeed62ba628cf254c63e2a278e5 209 PANTHER PTHR23026 11 209 1.4E-50 T 22-04-2016 SMGD1_RS13030 cd27baeed62ba628cf254c63e2a278e5 209 PANTHER PTHR23026:SF101 11 209 1.4E-50 T 22-04-2016 SMGD1_RS13030 cd27baeed62ba628cf254c63e2a278e5 209 Gene3D G3DSA:3.40.109.10 2 208 2.5E-64 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 SMGD1_RS13030 cd27baeed62ba628cf254c63e2a278e5 209 SUPERFAMILY SSF55469 6 206 1.83E-52 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 SMGD1_RS03655 93a0e44d2e877b07d8d20ded61d363bc 394 Pfam PF00155 Aminotransferase class I and II 40 383 3.1E-38 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SMGD1_RS03655 93a0e44d2e877b07d8d20ded61d363bc 394 PANTHER PTHR11751:SF422 4 384 2.8E-112 T 22-04-2016 SMGD1_RS03655 93a0e44d2e877b07d8d20ded61d363bc 394 PANTHER PTHR11751 4 384 2.8E-112 T 22-04-2016 SMGD1_RS03655 93a0e44d2e877b07d8d20ded61d363bc 394 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 5 388 6.4E-164 T 22-04-2016 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936 SMGD1_RS03655 93a0e44d2e877b07d8d20ded61d363bc 394 SUPERFAMILY SSF53383 23 388 1.28E-85 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SMGD1_RS03655 93a0e44d2e877b07d8d20ded61d363bc 394 Gene3D G3DSA:3.40.640.10 43 253 4.3E-49 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SMGD1_RS03655 93a0e44d2e877b07d8d20ded61d363bc 394 Gene3D G3DSA:3.90.1150.10 254 388 5.2E-34 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SMGD1_RS12180 2bd4a81a4de0d2dcd8ffc8cb0bf2f1ce 394 SUPERFAMILY SSF53383 11 391 1.34E-100 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SMGD1_RS12180 2bd4a81a4de0d2dcd8ffc8cb0bf2f1ce 394 Pfam PF00202 Aminotransferase class-III 21 390 2.7E-94 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SMGD1_RS12180 2bd4a81a4de0d2dcd8ffc8cb0bf2f1ce 394 Gene3D G3DSA:3.40.640.10 56 295 5.4E-71 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SMGD1_RS12180 2bd4a81a4de0d2dcd8ffc8cb0bf2f1ce 394 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 9 392 38.407 T 22-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 SMGD1_RS12180 2bd4a81a4de0d2dcd8ffc8cb0bf2f1ce 394 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 217 254 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SMGD1_RS12180 2bd4a81a4de0d2dcd8ffc8cb0bf2f1ce 394 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 11 391 1.9E-126 T 22-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 SMGD1_RS12180 2bd4a81a4de0d2dcd8ffc8cb0bf2f1ce 394 Gene3D G3DSA:3.90.1150.10 299 392 2.3E-28 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SMGD1_RS12180 2bd4a81a4de0d2dcd8ffc8cb0bf2f1ce 394 Gene3D G3DSA:3.90.1150.10 4 55 2.3E-28 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SMGD1_RS12180 2bd4a81a4de0d2dcd8ffc8cb0bf2f1ce 394 PANTHER PTHR11986 2 394 4.4E-138 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SMGD1_RS12180 2bd4a81a4de0d2dcd8ffc8cb0bf2f1ce 394 PANTHER PTHR11986:SF79 2 394 4.4E-138 T 22-04-2016 SMGD1_RS02590 582bce47358ea4f22816ae887f90e318 319 PANTHER PTHR10366:SF246 6 316 7.0E-135 T 22-04-2016 SMGD1_RS02590 582bce47358ea4f22816ae887f90e318 319 Gene3D G3DSA:3.90.25.10 210 232 3.9E-12 T 22-04-2016 SMGD1_RS02590 582bce47358ea4f22816ae887f90e318 319 Gene3D G3DSA:3.90.25.10 297 318 3.9E-12 T 22-04-2016 SMGD1_RS02590 582bce47358ea4f22816ae887f90e318 319 PANTHER PTHR10366 6 316 7.0E-135 T 22-04-2016 SMGD1_RS02590 582bce47358ea4f22816ae887f90e318 319 Hamap MF_00956 GDP-L-fucose synthase [fcl]. 4 318 49.627 T 22-04-2016 IPR028614 GDP-L-fucose synthase/GDP-L-colitose synthase GO:0009226|GO:0016491 KEGG: 00010+1.1.1.27|KEGG: 00051+1.1.1.271|KEGG: 00270+1.1.1.27|KEGG: 00520+1.1.1.271|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-66|MetaCyc: PWY-6901|UniPathway: UPA00128 SMGD1_RS02590 582bce47358ea4f22816ae887f90e318 319 Pfam PF01370 NAD dependent epimerase/dehydratase family 7 250 3.2E-81 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 SMGD1_RS02590 582bce47358ea4f22816ae887f90e318 319 Gene3D G3DSA:3.40.50.720 5 209 8.2E-77 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS02590 582bce47358ea4f22816ae887f90e318 319 SUPERFAMILY SSF51735 2 318 5.77E-70 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS05720 bbb23a16bae62d5be6b999befc79282d 259 PANTHER PTHR12029 3 255 1.4E-46 T 22-04-2016 SMGD1_RS05720 bbb23a16bae62d5be6b999befc79282d 259 Pfam PF00588 SpoU rRNA Methylase family 113 253 1.7E-36 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 SMGD1_RS05720 bbb23a16bae62d5be6b999befc79282d 259 SUPERFAMILY SSF75217 111 255 5.43E-39 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases SMGD1_RS05720 bbb23a16bae62d5be6b999befc79282d 259 Gene3D G3DSA:3.30.1330.30 6 92 1.3E-4 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like SMGD1_RS05720 bbb23a16bae62d5be6b999befc79282d 259 Gene3D G3DSA:3.40.1280.10 111 256 2.3E-45 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SMGD1_RS11905 63c8f0e4a523a341b7d5075660d63f46 184 Gene3D G3DSA:3.40.50.700 9 145 6.5E-33 T 22-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 SMGD1_RS11905 63c8f0e4a523a341b7d5075660d63f46 184 PANTHER PTHR11995 4 177 5.5E-52 T 22-04-2016 SMGD1_RS11905 63c8f0e4a523a341b7d5075660d63f46 184 SUPERFAMILY SSF56770 6 141 1.83E-51 T 22-04-2016 SMGD1_RS11905 63c8f0e4a523a341b7d5075660d63f46 184 PANTHER PTHR11995:SF3 4 177 5.5E-52 T 22-04-2016 SMGD1_RS11905 63c8f0e4a523a341b7d5075660d63f46 184 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 22 132 6.9E-24 T 22-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 SMGD1_RS08560 cdf3debbe307fdd780212db32dbcdd1f 184 SMART SM00926 53 107 7.7E-13 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 SMGD1_RS08560 cdf3debbe307fdd780212db32dbcdd1f 184 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 12 29 7.8E-4 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal SMGD1_RS08560 cdf3debbe307fdd780212db32dbcdd1f 184 SUPERFAMILY SSF53706 52 184 8.25E-49 T 22-04-2016 SMGD1_RS08560 cdf3debbe307fdd780212db32dbcdd1f 184 PANTHER PTHR11615 3 184 8.0E-58 T 22-04-2016 SMGD1_RS08560 cdf3debbe307fdd780212db32dbcdd1f 184 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 58 75 - T 22-04-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 SMGD1_RS08560 cdf3debbe307fdd780212db32dbcdd1f 184 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 54 105 3.4E-12 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 SMGD1_RS08560 cdf3debbe307fdd780212db32dbcdd1f 184 Pfam PF00384 Molybdopterin oxidoreductase 110 181 5.9E-14 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 SMGD1_RS08560 cdf3debbe307fdd780212db32dbcdd1f 184 Gene3D G3DSA:2.20.25.90 53 108 3.9E-17 T 22-04-2016 SMGD1_RS08560 cdf3debbe307fdd780212db32dbcdd1f 184 PANTHER PTHR11615:SF140 3 184 8.0E-58 T 22-04-2016 SMGD1_RS08560 cdf3debbe307fdd780212db32dbcdd1f 184 Gene3D G3DSA:3.40.50.740 110 181 5.0E-24 T 22-04-2016 SMGD1_RS03090 a4b39e9eafe9e6c2a1e124dbfb6272c7 347 SUPERFAMILY SSF52172 120 175 2.13E-7 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS03090 a4b39e9eafe9e6c2a1e124dbfb6272c7 347 Pfam PF13690 Chemotaxis phosphatase CheX 237 333 1.3E-12 T 22-04-2016 IPR028051 Chemotaxis phosphatase CheX-like domain KEGG: 00231+3.-.-.-|KEGG: 00563+3.-.-.-|KEGG: 00983+3.-.-.- SMGD1_RS03090 a4b39e9eafe9e6c2a1e124dbfb6272c7 347 Gene3D G3DSA:3.40.50.2300 118 177 1.1E-7 T 22-04-2016 SMGD1_RS03090 a4b39e9eafe9e6c2a1e124dbfb6272c7 347 Gene3D G3DSA:3.40.1550.10 202 322 1.5E-14 T 22-04-2016 IPR028976 CheC-like domain SMGD1_RS03090 a4b39e9eafe9e6c2a1e124dbfb6272c7 347 SUPERFAMILY SSF103039 201 341 6.15E-17 T 22-04-2016 IPR028976 CheC-like domain SMGD1_RS08585 32ba6cd0d451498b9d5c1aab5ad29f96 214 Gene3D G3DSA:3.40.50.300 2 212 1.1E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS08585 32ba6cd0d451498b9d5c1aab5ad29f96 214 PANTHER PTHR24220 5 213 8.8E-67 T 22-04-2016 SMGD1_RS08585 32ba6cd0d451498b9d5c1aab5ad29f96 214 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMGD1_RS08585 32ba6cd0d451498b9d5c1aab5ad29f96 214 SUPERFAMILY SSF52540 3 212 7.0E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS08585 32ba6cd0d451498b9d5c1aab5ad29f96 214 Pfam PF00005 ABC transporter 19 160 8.9E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMGD1_RS08585 32ba6cd0d451498b9d5c1aab5ad29f96 214 SMART SM00382 27 207 1.2E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain SMGD1_RS00065 4b9afdf3c6eb335004e4b90820187a67 708 Pfam PF00672 HAMP domain 308 370 9.0E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SMGD1_RS00065 4b9afdf3c6eb335004e4b90820187a67 708 SMART SM00283 389 619 1.6E-15 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SMGD1_RS00065 4b9afdf3c6eb335004e4b90820187a67 708 SUPERFAMILY SSF58104 342 594 7.72E-52 T 22-04-2016 SMGD1_RS00065 4b9afdf3c6eb335004e4b90820187a67 708 SUPERFAMILY SSF103190 54 181 6.67E-12 T 22-04-2016 IPR029151 Periplasmic sensor domain-like SMGD1_RS00065 4b9afdf3c6eb335004e4b90820187a67 708 PANTHER PTHR32089 1 593 1.1E-50 T 22-04-2016 SMGD1_RS00065 4b9afdf3c6eb335004e4b90820187a67 708 Pfam PF13682 Chemoreceptor zinc-binding domain 606 669 3.8E-9 T 22-04-2016 IPR025991 Chemoreceptor zinc-binding domain UniPathway: UPA00599 SMGD1_RS00065 4b9afdf3c6eb335004e4b90820187a67 708 SMART SM00304 320 374 1.1E-4 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SMGD1_RS00065 4b9afdf3c6eb335004e4b90820187a67 708 Gene3D G3DSA:1.10.287.950 412 586 9.7E-42 T 22-04-2016 SMGD1_RS00065 4b9afdf3c6eb335004e4b90820187a67 708 Pfam PF14827 Double sensory domain of two-component sensor kinase 45 280 2.0E-29 T 22-04-2016 IPR029150 Double Cache domain 3 SMGD1_RS00065 4b9afdf3c6eb335004e4b90820187a67 708 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 472 574 2.7E-32 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SMGD1_RS08575 20fdfa676b526967d91918731975d826 255 SUPERFAMILY SSF81342 58 248 1.26E-15 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 SMGD1_RS08575 20fdfa676b526967d91918731975d826 255 Pfam PF01292 Prokaryotic cytochrome b561 64 209 5.0E-7 T 22-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 SMGD1_RS08575 20fdfa676b526967d91918731975d826 255 Gene3D G3DSA:1.20.950.20 58 249 4.6E-20 T 22-04-2016 SMGD1_RS07615 6c00907d552cf488be482dcaac9a74f6 140 SUPERFAMILY SSF52161 4 137 2.88E-45 T 22-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 SMGD1_RS07615 6c00907d552cf488be482dcaac9a74f6 140 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 6 138 4.5E-51 T 22-04-2016 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 SMGD1_RS07615 6c00907d552cf488be482dcaac9a74f6 140 PIRSF PIRSF002181 1 140 9.5E-43 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 SMGD1_RS07615 6c00907d552cf488be482dcaac9a74f6 140 Gene3D G3DSA:3.90.1180.10 6 137 3.2E-49 T 22-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 SMGD1_RS07615 6c00907d552cf488be482dcaac9a74f6 140 Pfam PF00572 Ribosomal protein L13 15 137 6.7E-46 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 SMGD1_RS07615 6c00907d552cf488be482dcaac9a74f6 140 PANTHER PTHR11545 1 137 5.3E-48 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 SMGD1_RS07615 6c00907d552cf488be482dcaac9a74f6 140 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 16 139 24.55 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 SMGD1_RS00825 399465b0fbc277b9aab24774a9f84a35 297 Pfam PF16916 Dimerisation domain of Zinc Transporter 206 285 8.2E-19 T 22-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain SMGD1_RS00825 399465b0fbc277b9aab24774a9f84a35 297 SUPERFAMILY SSF160240 205 287 2.09E-17 T 22-04-2016 SMGD1_RS00825 399465b0fbc277b9aab24774a9f84a35 297 PANTHER PTHR11562 2 294 3.4E-75 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 SMGD1_RS00825 399465b0fbc277b9aab24774a9f84a35 297 Gene3D G3DSA:1.20.1510.10 5 202 8.3E-45 T 22-04-2016 IPR027469 Cation efflux protein transmembrane domain SMGD1_RS00825 399465b0fbc277b9aab24774a9f84a35 297 SUPERFAMILY SSF161111 2 203 1.7E-49 T 22-04-2016 SMGD1_RS00825 399465b0fbc277b9aab24774a9f84a35 297 Pfam PF01545 Cation efflux family 9 202 4.4E-41 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 SMGD1_RS00825 399465b0fbc277b9aab24774a9f84a35 297 Gene3D G3DSA:3.30.70.1350 203 287 4.8E-21 T 22-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain SMGD1_RS00825 399465b0fbc277b9aab24774a9f84a35 297 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 5 286 2.9E-63 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 SMGD1_RS00825 399465b0fbc277b9aab24774a9f84a35 297 PANTHER PTHR11562:SF55 2 294 3.4E-75 T 22-04-2016 SMGD1_RS04745 92d159896075660359a98d4710d097ea 417 TIGRFAM TIGR00935 2a45: arsenite/antimonite efflux pump membrane protein 3 416 7.1E-163 T 22-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 SMGD1_RS04745 92d159896075660359a98d4710d097ea 417 PRINTS PR00758 Arsenical pump membrane protein signature 359 384 6.4E-78 T 22-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 SMGD1_RS04745 92d159896075660359a98d4710d097ea 417 PRINTS PR00758 Arsenical pump membrane protein signature 278 302 6.4E-78 T 22-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 SMGD1_RS04745 92d159896075660359a98d4710d097ea 417 PRINTS PR00758 Arsenical pump membrane protein signature 101 125 6.4E-78 T 22-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 SMGD1_RS04745 92d159896075660359a98d4710d097ea 417 PRINTS PR00758 Arsenical pump membrane protein signature 392 416 6.4E-78 T 22-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 SMGD1_RS04745 92d159896075660359a98d4710d097ea 417 PRINTS PR00758 Arsenical pump membrane protein signature 217 242 6.4E-78 T 22-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 SMGD1_RS04745 92d159896075660359a98d4710d097ea 417 PRINTS PR00758 Arsenical pump membrane protein signature 177 200 6.4E-78 T 22-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 SMGD1_RS04745 92d159896075660359a98d4710d097ea 417 PRINTS PR00758 Arsenical pump membrane protein signature 144 168 6.4E-78 T 22-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 SMGD1_RS04745 92d159896075660359a98d4710d097ea 417 PANTHER PTHR10283 1 416 1.6E-117 T 22-04-2016 SMGD1_RS04745 92d159896075660359a98d4710d097ea 417 PANTHER PTHR10283:SF21 1 416 1.6E-117 T 22-04-2016 SMGD1_RS04745 92d159896075660359a98d4710d097ea 417 Pfam PF02040 Arsenical pump membrane protein 3 416 9.1E-135 T 22-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 SMGD1_RS04495 26378a996ff154790782a88c852b4813 399 PANTHER PTHR23115:SF112 1 397 1.4E-240 T 22-04-2016 SMGD1_RS04495 26378a996ff154790782a88c852b4813 399 Pfam PF03144 Elongation factor Tu domain 2 230 299 1.2E-19 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 SMGD1_RS04495 26378a996ff154790782a88c852b4813 399 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 398 3.3E-222 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 SMGD1_RS04495 26378a996ff154790782a88c852b4813 399 PRINTS PR00315 GTP-binding elongation factor signature 131 140 3.9E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMGD1_RS04495 26378a996ff154790782a88c852b4813 399 PRINTS PR00315 GTP-binding elongation factor signature 14 27 3.9E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMGD1_RS04495 26378a996ff154790782a88c852b4813 399 PRINTS PR00315 GTP-binding elongation factor signature 78 88 3.9E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMGD1_RS04495 26378a996ff154790782a88c852b4813 399 PRINTS PR00315 GTP-binding elongation factor signature 94 105 3.9E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMGD1_RS04495 26378a996ff154790782a88c852b4813 399 PRINTS PR00315 GTP-binding elongation factor signature 58 66 3.9E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMGD1_RS04495 26378a996ff154790782a88c852b4813 399 SUPERFAMILY SSF50465 307 399 1.61E-36 T 22-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal SMGD1_RS04495 26378a996ff154790782a88c852b4813 399 SUPERFAMILY SSF50447 210 306 7.86E-31 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain SMGD1_RS04495 26378a996ff154790782a88c852b4813 399 Gene3D G3DSA:2.40.30.10 305 398 7.9E-47 T 22-04-2016 SMGD1_RS04495 26378a996ff154790782a88c852b4813 399 Gene3D G3DSA:2.40.30.10 217 303 5.4E-37 T 22-04-2016 SMGD1_RS04495 26378a996ff154790782a88c852b4813 399 SUPERFAMILY SSF52540 6 224 4.1E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS04495 26378a996ff154790782a88c852b4813 399 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 399 58.892 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 SMGD1_RS04495 26378a996ff154790782a88c852b4813 399 Pfam PF03143 Elongation factor Tu C-terminal domain 303 397 1.1E-33 T 22-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal SMGD1_RS04495 26378a996ff154790782a88c852b4813 399 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 147 3.9E-14 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SMGD1_RS04495 26378a996ff154790782a88c852b4813 399 Gene3D G3DSA:3.40.50.300 4 216 7.5E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS04495 26378a996ff154790782a88c852b4813 399 PANTHER PTHR23115 1 397 1.4E-240 T 22-04-2016 SMGD1_RS04495 26378a996ff154790782a88c852b4813 399 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site SMGD1_RS04495 26378a996ff154790782a88c852b4813 399 Pfam PF00009 Elongation factor Tu GTP binding domain 10 206 2.7E-56 T 22-04-2016 SMGD1_RS07005 5acb67a9d56d11b53c1655d58e9f8dc6 442 SUPERFAMILY SSF161093 270 441 6.93E-49 T 22-04-2016 SMGD1_RS07005 5acb67a9d56d11b53c1655d58e9f8dc6 442 TIGRFAM TIGR00400 mgtE: magnesium transporter 12 441 3.5E-77 T 22-04-2016 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 SMGD1_RS07005 5acb67a9d56d11b53c1655d58e9f8dc6 442 Pfam PF01769 Divalent cation transporter 313 434 1.1E-26 T 22-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 SMGD1_RS07005 5acb67a9d56d11b53c1655d58e9f8dc6 442 Gene3D G3DSA:1.25.60.10 12 113 2.8E-16 T 22-04-2016 SMGD1_RS07005 5acb67a9d56d11b53c1655d58e9f8dc6 442 Gene3D G3DSA:3.10.580.10 114 254 1.3E-11 T 22-04-2016 SMGD1_RS07005 5acb67a9d56d11b53c1655d58e9f8dc6 442 PANTHER PTHR41394:SF1 207 431 2.4E-44 T 22-04-2016 SMGD1_RS07005 5acb67a9d56d11b53c1655d58e9f8dc6 442 Gene3D G3DSA:1.10.357.20 271 441 8.8E-51 T 22-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 SMGD1_RS07005 5acb67a9d56d11b53c1655d58e9f8dc6 442 Pfam PF03448 MgtE intracellular N domain 16 120 6.7E-21 T 22-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain SMGD1_RS07005 5acb67a9d56d11b53c1655d58e9f8dc6 442 SUPERFAMILY SSF54631 122 264 2.44E-15 T 22-04-2016 SMGD1_RS07005 5acb67a9d56d11b53c1655d58e9f8dc6 442 SMART SM00924 16 122 7.5E-21 T 22-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain SMGD1_RS07005 5acb67a9d56d11b53c1655d58e9f8dc6 442 PANTHER PTHR41394 207 431 2.4E-44 T 22-04-2016 SMGD1_RS07005 5acb67a9d56d11b53c1655d58e9f8dc6 442 SUPERFAMILY SSF158791 11 119 3.92E-17 T 22-04-2016 SMGD1_RS04675 f5f005303b3a3de1e2e5bec3c5be0697 332 SUPERFAMILY SSF47789 248 317 4.97E-20 T 22-04-2016 SMGD1_RS04675 f5f005303b3a3de1e2e5bec3c5be0697 332 PANTHER PTHR32108:SF0 9 327 9.5E-66 T 22-04-2016 SMGD1_RS04675 f5f005303b3a3de1e2e5bec3c5be0697 332 Gene3D G3DSA:3.30.1360.10 10 51 4.3E-23 T 22-04-2016 SMGD1_RS04675 f5f005303b3a3de1e2e5bec3c5be0697 332 Gene3D G3DSA:3.30.1360.10 173 226 4.3E-23 T 22-04-2016 SMGD1_RS04675 f5f005303b3a3de1e2e5bec3c5be0697 332 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 62 155 4.0E-16 T 22-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SMGD1_RS04675 f5f005303b3a3de1e2e5bec3c5be0697 332 SUPERFAMILY SSF55257 11 53 2.51E-21 T 22-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SMGD1_RS04675 f5f005303b3a3de1e2e5bec3c5be0697 332 SUPERFAMILY SSF55257 174 228 2.51E-21 T 22-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SMGD1_RS04675 f5f005303b3a3de1e2e5bec3c5be0697 332 PANTHER PTHR32108 9 327 9.5E-66 T 22-04-2016 SMGD1_RS04675 f5f005303b3a3de1e2e5bec3c5be0697 332 SUPERFAMILY SSF56553 53 173 2.09E-29 T 22-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SMGD1_RS04675 f5f005303b3a3de1e2e5bec3c5be0697 332 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 242 305 9.5E-24 T 22-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SMGD1_RS04675 f5f005303b3a3de1e2e5bec3c5be0697 332 Gene3D G3DSA:1.10.150.20 245 317 2.0E-21 T 22-04-2016 SMGD1_RS04675 f5f005303b3a3de1e2e5bec3c5be0697 332 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 30 222 1.9E-10 T 22-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SMGD1_RS04675 f5f005303b3a3de1e2e5bec3c5be0697 332 Gene3D G3DSA:2.170.120.12 53 172 6.3E-34 T 22-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SMGD1_RS04675 f5f005303b3a3de1e2e5bec3c5be0697 332 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 254 318 5.0E-18 T 22-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SMGD1_RS04675 f5f005303b3a3de1e2e5bec3c5be0697 332 SMART SM00662 23 229 1.8E-52 T 22-04-2016 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SMGD1_RS04675 f5f005303b3a3de1e2e5bec3c5be0697 332 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 312 1.1E-86 T 22-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SMGD1_RS04675 f5f005303b3a3de1e2e5bec3c5be0697 332 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 1 314 29.435 T 22-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SMGD1_RS08765 e9757363adcf278e794eedf2eb3be767 137 SUPERFAMILY SSF54919 1 136 3.67E-57 T 22-04-2016 SMGD1_RS08765 e9757363adcf278e794eedf2eb3be767 137 PANTHER PTHR11349 1 136 5.4E-70 T 22-04-2016 SMGD1_RS08765 e9757363adcf278e794eedf2eb3be767 137 Gene3D G3DSA:3.30.70.141 1 136 1.6E-58 T 22-04-2016 SMGD1_RS08765 e9757363adcf278e794eedf2eb3be767 137 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 112 120 - T 22-04-2016 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SMGD1_RS08765 e9757363adcf278e794eedf2eb3be767 137 SMART SM00562 1 137 5.8E-79 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SMGD1_RS08765 e9757363adcf278e794eedf2eb3be767 137 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 1 136 34.877 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SMGD1_RS08765 e9757363adcf278e794eedf2eb3be767 137 Pfam PF00334 Nucleoside diphosphate kinase 2 136 3.1E-54 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SMGD1_RS08765 e9757363adcf278e794eedf2eb3be767 137 PRINTS PR01243 Nucleoside diphosphate kinase signature 68 85 6.5E-41 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SMGD1_RS08765 e9757363adcf278e794eedf2eb3be767 137 PRINTS PR01243 Nucleoside diphosphate kinase signature 112 131 6.5E-41 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SMGD1_RS08765 e9757363adcf278e794eedf2eb3be767 137 PRINTS PR01243 Nucleoside diphosphate kinase signature 89 105 6.5E-41 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SMGD1_RS08765 e9757363adcf278e794eedf2eb3be767 137 PRINTS PR01243 Nucleoside diphosphate kinase signature 4 26 6.5E-41 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SMGD1_RS08765 e9757363adcf278e794eedf2eb3be767 137 PRINTS PR01243 Nucleoside diphosphate kinase signature 48 67 6.5E-41 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SMGD1_RS06255 b3e43c34179eb17d45884797b411096d 158 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 1 153 39.997 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 SMGD1_RS06255 b3e43c34179eb17d45884797b411096d 158 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 82 98 1.4E-20 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 SMGD1_RS06255 b3e43c34179eb17d45884797b411096d 158 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 106 125 1.4E-20 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 SMGD1_RS06255 b3e43c34179eb17d45884797b411096d 158 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 4 17 1.4E-20 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 SMGD1_RS06255 b3e43c34179eb17d45884797b411096d 158 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 60 76 1.4E-20 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 SMGD1_RS06255 b3e43c34179eb17d45884797b411096d 158 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 138 150 1.4E-20 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 SMGD1_RS06255 b3e43c34179eb17d45884797b411096d 158 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 3 150 1.0E-51 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 SMGD1_RS06255 b3e43c34179eb17d45884797b411096d 158 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 112 147 - T 22-04-2016 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 SMGD1_RS06255 b3e43c34179eb17d45884797b411096d 158 SUPERFAMILY SSF53098 1 153 4.55E-42 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMGD1_RS06255 b3e43c34179eb17d45884797b411096d 158 PANTHER PTHR30194 1 150 3.4E-42 T 22-04-2016 SMGD1_RS06255 b3e43c34179eb17d45884797b411096d 158 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 3 154 5.1E-54 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 SMGD1_RS06255 b3e43c34179eb17d45884797b411096d 158 Gene3D G3DSA:3.30.420.10 1 154 2.7E-50 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMGD1_RS09710 a20f4fb9799ebdd239f4324edaec3fa4 604 Gene3D G3DSA:1.10.230.10 449 540 4.3E-15 T 22-04-2016 IPR016143 Citrate synthase-like, small alpha subdomain SMGD1_RS09710 a20f4fb9799ebdd239f4324edaec3fa4 604 Gene3D G3DSA:1.10.580.10 385 448 1.9E-5 T 22-04-2016 IPR016142 Citrate synthase-like, large alpha subdomain UniPathway: UPA00223 SMGD1_RS09710 a20f4fb9799ebdd239f4324edaec3fa4 604 PRINTS PR01798 Succinyl-CoA synthase signature 229 242 2.0E-5 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 SMGD1_RS09710 a20f4fb9799ebdd239f4324edaec3fa4 604 PRINTS PR01798 Succinyl-CoA synthase signature 198 216 2.0E-5 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 SMGD1_RS09710 a20f4fb9799ebdd239f4324edaec3fa4 604 PRINTS PR01798 Succinyl-CoA synthase signature 265 282 2.0E-5 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 SMGD1_RS09710 a20f4fb9799ebdd239f4324edaec3fa4 604 Pfam PF00549 CoA-ligase 173 294 3.4E-12 T 22-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 SMGD1_RS09710 a20f4fb9799ebdd239f4324edaec3fa4 604 PANTHER PTHR23118 3 604 0.0 T 22-04-2016 SMGD1_RS09710 a20f4fb9799ebdd239f4324edaec3fa4 604 SUPERFAMILY SSF51735 2 135 2.98E-11 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS09710 a20f4fb9799ebdd239f4324edaec3fa4 604 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 258 274 - T 22-04-2016 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site SMGD1_RS09710 a20f4fb9799ebdd239f4324edaec3fa4 604 SUPERFAMILY SSF48256 129 594 1.7E-71 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 SMGD1_RS09710 a20f4fb9799ebdd239f4324edaec3fa4 604 Gene3D G3DSA:3.40.50.720 5 131 6.1E-12 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS09710 a20f4fb9799ebdd239f4324edaec3fa4 604 Pfam PF00285 Citrate synthase, C-terminal domain 345 580 4.4E-21 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 SMGD1_RS09710 a20f4fb9799ebdd239f4324edaec3fa4 604 Gene3D G3DSA:3.40.50.261 132 312 6.0E-51 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 SMGD1_RS04840 2b4474054ab8cca13a4e7877d771de0b 252 PRINTS PR00599 Methionine aminopeptidase-1 signature 90 106 8.4E-20 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase SMGD1_RS04840 2b4474054ab8cca13a4e7877d771de0b 252 PRINTS PR00599 Methionine aminopeptidase-1 signature 160 172 8.4E-20 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase SMGD1_RS04840 2b4474054ab8cca13a4e7877d771de0b 252 PRINTS PR00599 Methionine aminopeptidase-1 signature 194 206 8.4E-20 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase SMGD1_RS04840 2b4474054ab8cca13a4e7877d771de0b 252 PRINTS PR00599 Methionine aminopeptidase-1 signature 68 81 8.4E-20 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase SMGD1_RS04840 2b4474054ab8cca13a4e7877d771de0b 252 PANTHER PTHR10804:SF41 1 251 2.7E-78 T 22-04-2016 SMGD1_RS04840 2b4474054ab8cca13a4e7877d771de0b 252 SUPERFAMILY SSF55920 4 250 6.02E-70 T 22-04-2016 IPR000994 Peptidase M24, structural domain SMGD1_RS04840 2b4474054ab8cca13a4e7877d771de0b 252 Gene3D G3DSA:3.90.230.10 4 251 1.1E-71 T 22-04-2016 IPR000994 Peptidase M24, structural domain SMGD1_RS04840 2b4474054ab8cca13a4e7877d771de0b 252 PANTHER PTHR10804 1 251 2.7E-78 T 22-04-2016 SMGD1_RS04840 2b4474054ab8cca13a4e7877d771de0b 252 Hamap MF_01974 Methionine aminopeptidase [map]. 3 252 34.63 T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 SMGD1_RS04840 2b4474054ab8cca13a4e7877d771de0b 252 Pfam PF00557 Metallopeptidase family M24 12 241 6.2E-44 T 22-04-2016 IPR000994 Peptidase M24, structural domain SMGD1_RS04840 2b4474054ab8cca13a4e7877d771de0b 252 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 166 184 - T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 SMGD1_RS04840 2b4474054ab8cca13a4e7877d771de0b 252 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 3 251 7.5E-88 T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 SMGD1_RS12920 b5d24c07e6b4814390ea520950f10a53 221 SUPERFAMILY SSF103247 64 186 3.66E-11 T 22-04-2016 IPR005180 Domain of unknown function DUF302 SMGD1_RS12920 b5d24c07e6b4814390ea520950f10a53 221 Pfam PF03625 Domain of unknown function DUF302 109 154 7.0E-6 T 22-04-2016 IPR005180 Domain of unknown function DUF302 SMGD1_RS12920 b5d24c07e6b4814390ea520950f10a53 221 Gene3D G3DSA:3.30.310.70 65 186 7.7E-10 T 22-04-2016 IPR005180 Domain of unknown function DUF302 SMGD1_RS03820 63a2290d8ef5722e55096d1ebbcf8ab1 119 PRINTS PR00061 Ribosomal protein L19 signature 36 65 1.3E-35 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS03820 63a2290d8ef5722e55096d1ebbcf8ab1 119 PRINTS PR00061 Ribosomal protein L19 signature 6 35 1.3E-35 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS03820 63a2290d8ef5722e55096d1ebbcf8ab1 119 PRINTS PR00061 Ribosomal protein L19 signature 91 116 1.3E-35 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS03820 63a2290d8ef5722e55096d1ebbcf8ab1 119 ProSitePatterns PS01015 Ribosomal protein L19 signature. 89 104 - T 22-04-2016 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS03820 63a2290d8ef5722e55096d1ebbcf8ab1 119 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 4 116 1.1E-45 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS03820 63a2290d8ef5722e55096d1ebbcf8ab1 119 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 3 117 30.171 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS03820 63a2290d8ef5722e55096d1ebbcf8ab1 119 PIRSF PIRSF002191 1 119 4.4E-46 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS03820 63a2290d8ef5722e55096d1ebbcf8ab1 119 SUPERFAMILY SSF50104 2 118 7.62E-39 T 22-04-2016 IPR008991 Translation protein SH3-like domain SMGD1_RS03820 63a2290d8ef5722e55096d1ebbcf8ab1 119 Pfam PF01245 Ribosomal protein L19 5 115 1.7E-43 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS03820 63a2290d8ef5722e55096d1ebbcf8ab1 119 PANTHER PTHR15680 1 119 1.2E-42 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS05795 2d20f028875e2317ce84703201fd8fa8 447 SUPERFAMILY SSF51905 51 159 3.71E-19 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS05795 2d20f028875e2317ce84703201fd8fa8 447 Gene3D G3DSA:3.50.50.60 53 165 1.6E-25 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS05795 2d20f028875e2317ce84703201fd8fa8 447 Gene3D G3DSA:3.50.50.60 300 370 1.6E-25 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS05795 2d20f028875e2317ce84703201fd8fa8 447 PANTHER PTHR10632 1 445 1.9E-92 T 22-04-2016 SMGD1_RS05795 2d20f028875e2317ce84703201fd8fa8 447 PANTHER PTHR10632:SF10 1 445 1.9E-92 T 22-04-2016 SMGD1_RS05795 2d20f028875e2317ce84703201fd8fa8 447 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 53 154 1.3E-6 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS05795 2d20f028875e2317ce84703201fd8fa8 447 SUPERFAMILY SSF51905 172 298 1.51E-25 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS05795 2d20f028875e2317ce84703201fd8fa8 447 Pfam PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding 381 445 7.2E-7 T 22-04-2016 IPR015323 Flavocytochrome c sulphide dehydrogenase, flavin-binding GO:0016491|GO:0050660|GO:0055114 KEGG: 00920+1.8.2.3|MetaCyc: PWY-5274 SMGD1_RS05795 2d20f028875e2317ce84703201fd8fa8 447 Gene3D G3DSA:3.50.50.60 173 298 5.7E-37 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS13950 ab48acffff949b8c92539a108d25c25d 249 Gene3D G3DSA:3.60.10.10 3 248 1.5E-82 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SMGD1_RS13950 ab48acffff949b8c92539a108d25c25d 249 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 3 247 6.9E-82 T 22-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 SMGD1_RS13950 ab48acffff949b8c92539a108d25c25d 249 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 12 240 2.4E-19 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SMGD1_RS13950 ab48acffff949b8c92539a108d25c25d 249 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 23 32 - T 22-04-2016 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 SMGD1_RS13950 ab48acffff949b8c92539a108d25c25d 249 SUPERFAMILY SSF56219 3 248 1.31E-66 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SMGD1_RS13950 ab48acffff949b8c92539a108d25c25d 249 PANTHER PTHR22748 4 249 4.2E-98 T 22-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 SMGD1_RS13950 ab48acffff949b8c92539a108d25c25d 249 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 3 246 9.7E-80 T 22-04-2016 SMGD1_RS12825 02722cea980466cf2e49851e80e48de8 556 PANTHER PTHR26402 4 144 2.5E-12 T 22-04-2016 SMGD1_RS12825 02722cea980466cf2e49851e80e48de8 556 PANTHER PTHR26402 374 395 2.5E-12 T 22-04-2016 SMGD1_RS12825 02722cea980466cf2e49851e80e48de8 556 Pfam PF00072 Response regulator receiver domain 7 126 1.4E-14 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS12825 02722cea980466cf2e49851e80e48de8 556 SUPERFAMILY SSF52172 6 139 1.21E-19 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS12825 02722cea980466cf2e49851e80e48de8 556 SMART SM00448 4 126 9.3E-11 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS12825 02722cea980466cf2e49851e80e48de8 556 Gene3D G3DSA:3.40.50.2300 7 142 6.3E-19 T 22-04-2016 SMGD1_RS08715 ca698e33bb622b061e90ea052b488aef 444 PANTHER PTHR30341:SF0 13 256 1.3E-147 T 22-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 SMGD1_RS08715 ca698e33bb622b061e90ea052b488aef 444 PANTHER PTHR30341:SF0 291 442 1.3E-147 T 22-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 SMGD1_RS08715 ca698e33bb622b061e90ea052b488aef 444 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 21 436 2.6E-122 T 22-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 SMGD1_RS08715 ca698e33bb622b061e90ea052b488aef 444 Pfam PF06965 Na+/H+ antiporter 1 20 436 3.3E-145 T 22-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 SMGD1_RS08715 ca698e33bb622b061e90ea052b488aef 444 Gene3D G3DSA:1.20.1530.10 17 257 2.0E-146 T 22-04-2016 IPR023171 Na/H antiporter domain SMGD1_RS08715 ca698e33bb622b061e90ea052b488aef 444 Gene3D G3DSA:1.20.1530.10 302 442 2.0E-146 T 22-04-2016 IPR023171 Na/H antiporter domain SMGD1_RS08715 ca698e33bb622b061e90ea052b488aef 444 PANTHER PTHR30341 13 256 1.3E-147 T 22-04-2016 SMGD1_RS08715 ca698e33bb622b061e90ea052b488aef 444 PANTHER PTHR30341 291 442 1.3E-147 T 22-04-2016 SMGD1_RS08715 ca698e33bb622b061e90ea052b488aef 444 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 18 442 22.647 T 22-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 SMGD1_RS00650 f0fb613d96a882d521263a770e7950c9 492 Pfam PF03573 outer membrane porin, OprD family 159 232 3.1E-6 T 22-04-2016 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 SMGD1_RS00650 f0fb613d96a882d521263a770e7950c9 492 Gene3D G3DSA:2.40.160.10 56 492 1.1E-39 T 22-04-2016 IPR023614 Porin domain SMGD1_RS10920 5d44ec6282ae3402deec21318a488882 149 Pfam PF02576 Putative ribosome maturation factor RimP 7 144 7.5E-28 T 22-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 SMGD1_RS10920 5d44ec6282ae3402deec21318a488882 149 Gene3D G3DSA:2.30.30.180 107 145 6.2E-4 T 22-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal SMGD1_RS10920 5d44ec6282ae3402deec21318a488882 149 Gene3D G3DSA:3.30.300.70 3 82 8.5E-17 T 22-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal SMGD1_RS10920 5d44ec6282ae3402deec21318a488882 149 SUPERFAMILY SSF74942 86 149 2.09E-7 T 22-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal SMGD1_RS10920 5d44ec6282ae3402deec21318a488882 149 PANTHER PTHR33867:SF1 3 149 2.1E-20 T 22-04-2016 SMGD1_RS10920 5d44ec6282ae3402deec21318a488882 149 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 1 149 18.451 T 22-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 SMGD1_RS10920 5d44ec6282ae3402deec21318a488882 149 SUPERFAMILY SSF75420 5 85 1.57E-13 T 22-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal SMGD1_RS10920 5d44ec6282ae3402deec21318a488882 149 PANTHER PTHR33867 3 149 2.1E-20 T 22-04-2016 SMGD1_RS06565 721c09f61f733192abdde104c42faf15 480 Gene3D G3DSA:1.10.287.950 176 361 5.4E-49 T 22-04-2016 SMGD1_RS06565 721c09f61f733192abdde104c42faf15 480 SMART SM00283 144 374 5.0E-30 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SMGD1_RS06565 721c09f61f733192abdde104c42faf15 480 SUPERFAMILY SSF58104 92 113 2.62E-52 T 22-04-2016 SMGD1_RS06565 721c09f61f733192abdde104c42faf15 480 SUPERFAMILY SSF58104 162 381 2.62E-52 T 22-04-2016 SMGD1_RS06565 721c09f61f733192abdde104c42faf15 480 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 231 352 3.4E-37 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SMGD1_RS06565 721c09f61f733192abdde104c42faf15 480 Pfam PF13682 Chemoreceptor zinc-binding domain 370 430 1.1E-10 T 22-04-2016 IPR025991 Chemoreceptor zinc-binding domain UniPathway: UPA00599 SMGD1_RS06565 721c09f61f733192abdde104c42faf15 480 PANTHER PTHR32089 175 359 3.0E-48 T 22-04-2016 SMGD1_RS06565 721c09f61f733192abdde104c42faf15 480 PANTHER PTHR32089:SF1 175 359 3.0E-48 T 22-04-2016 SMGD1_RS05210 a9dd9ee0cdc332827159802554f444d9 377 Gene3D G3DSA:3.40.50.2000 209 363 1.6E-10 T 22-04-2016 SMGD1_RS05210 a9dd9ee0cdc332827159802554f444d9 377 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 26 363 4.1E-74 T 22-04-2016 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain SMGD1_RS05210 a9dd9ee0cdc332827159802554f444d9 377 Gene3D G3DSA:3.40.50.2000 1 208 1.6E-42 T 22-04-2016 SMGD1_RS05210 a9dd9ee0cdc332827159802554f444d9 377 TIGRFAM TIGR03568 NeuC_NnaA: UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing 2 362 1.4E-115 T 22-04-2016 IPR020004 UDP-N-acetylglucosamine 2-epimerase,UDP-hydrolysing GO:0004553|GO:0006047 KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18 SMGD1_RS05210 a9dd9ee0cdc332827159802554f444d9 377 SUPERFAMILY SSF53756 1 370 1.19E-78 T 22-04-2016 SMGD1_RS10345 6be1b20e97ee983fdbd1a532a3dbe093 117 SUPERFAMILY SSF51182 18 107 3.9E-23 T 22-04-2016 IPR011051 RmlC-like cupin domain SMGD1_RS10345 6be1b20e97ee983fdbd1a532a3dbe093 117 Pfam PF07883 Cupin domain 40 106 1.2E-12 T 22-04-2016 IPR013096 Cupin 2, conserved barrel SMGD1_RS10345 6be1b20e97ee983fdbd1a532a3dbe093 117 Gene3D G3DSA:2.60.120.10 14 110 4.3E-24 T 22-04-2016 IPR014710 RmlC-like jelly roll fold SMGD1_RS09755 c47c162655bd44a543bc17de272b6e01 782 PANTHER PTHR24093:SF50 69 777 1.0E-183 T 22-04-2016 SMGD1_RS09755 c47c162655bd44a543bc17de272b6e01 782 Gene3D G3DSA:2.70.150.10 235 386 2.2E-23 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SMGD1_RS09755 c47c162655bd44a543bc17de272b6e01 782 Gene3D G3DSA:3.30.70.100 68 136 8.4E-17 T 22-04-2016 SMGD1_RS09755 c47c162655bd44a543bc17de272b6e01 782 PRINTS PR00942 Copper-transporting ATPase 1 signature 187 207 4.2E-7 T 22-04-2016 SMGD1_RS09755 c47c162655bd44a543bc17de272b6e01 782 PRINTS PR00942 Copper-transporting ATPase 1 signature 93 114 4.2E-7 T 22-04-2016 SMGD1_RS09755 c47c162655bd44a543bc17de272b6e01 782 PRINTS PR00942 Copper-transporting ATPase 1 signature 207 232 4.2E-7 T 22-04-2016 SMGD1_RS09755 c47c162655bd44a543bc17de272b6e01 782 Gene3D G3DSA:3.40.50.1000 593 741 3.3E-45 T 22-04-2016 IPR023214 HAD-like domain SMGD1_RS09755 c47c162655bd44a543bc17de272b6e01 782 Gene3D G3DSA:3.40.50.1000 457 501 3.3E-45 T 22-04-2016 IPR023214 HAD-like domain SMGD1_RS09755 c47c162655bd44a543bc17de272b6e01 782 Pfam PF00403 Heavy-metal-associated domain 74 132 4.1E-11 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SMGD1_RS09755 c47c162655bd44a543bc17de272b6e01 782 PANTHER PTHR24093 69 777 1.0E-183 T 22-04-2016 SMGD1_RS09755 c47c162655bd44a543bc17de272b6e01 782 Pfam PF12156 Putative metal-binding domain of cation transport ATPase 3 63 3.1E-12 T 22-04-2016 IPR021993 Putative metal-binding domain of cation transport ATPase SMGD1_RS09755 c47c162655bd44a543bc17de272b6e01 782 Pfam PF00122 E1-E2 ATPase 257 476 5.7E-59 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SMGD1_RS09755 c47c162655bd44a543bc17de272b6e01 782 PRINTS PR00943 Copper-transporting ATPase signature 255 274 2.0E-12 T 22-04-2016 SMGD1_RS09755 c47c162655bd44a543bc17de272b6e01 782 PRINTS PR00943 Copper-transporting ATPase signature 468 483 2.0E-12 T 22-04-2016 SMGD1_RS09755 c47c162655bd44a543bc17de272b6e01 782 PRINTS PR00943 Copper-transporting ATPase signature 114 134 2.0E-12 T 22-04-2016 SMGD1_RS09755 c47c162655bd44a543bc17de272b6e01 782 PRINTS PR00943 Copper-transporting ATPase signature 650 667 2.0E-12 T 22-04-2016 SMGD1_RS09755 c47c162655bd44a543bc17de272b6e01 782 PRINTS PR00943 Copper-transporting ATPase signature 408 422 2.0E-12 T 22-04-2016 SMGD1_RS09755 c47c162655bd44a543bc17de272b6e01 782 PRINTS PR00943 Copper-transporting ATPase signature 707 721 2.0E-12 T 22-04-2016 SMGD1_RS09755 c47c162655bd44a543bc17de272b6e01 782 SUPERFAMILY SSF55008 65 138 4.06E-19 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SMGD1_RS09755 c47c162655bd44a543bc17de272b6e01 782 SUPERFAMILY SSF81653 288 384 1.44E-17 T 22-04-2016 SMGD1_RS09755 c47c162655bd44a543bc17de272b6e01 782 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 673 692 4.2E-22 T 22-04-2016 SMGD1_RS09755 c47c162655bd44a543bc17de272b6e01 782 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 696 708 4.2E-22 T 22-04-2016 SMGD1_RS09755 c47c162655bd44a543bc17de272b6e01 782 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 335 349 4.2E-22 T 22-04-2016 SMGD1_RS09755 c47c162655bd44a543bc17de272b6e01 782 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 485 499 4.2E-22 T 22-04-2016 SMGD1_RS09755 c47c162655bd44a543bc17de272b6e01 782 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 620 630 4.2E-22 T 22-04-2016 SMGD1_RS09755 c47c162655bd44a543bc17de272b6e01 782 ProSitePatterns PS01229 Hypothetical cof family signature 2. 673 695 - T 22-04-2016 SMGD1_RS09755 c47c162655bd44a543bc17de272b6e01 782 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 487 493 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site SMGD1_RS09755 c47c162655bd44a543bc17de272b6e01 782 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 224 774 1.1E-157 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 SMGD1_RS09755 c47c162655bd44a543bc17de272b6e01 782 SUPERFAMILY SSF56784 483 503 1.77E-52 T 22-04-2016 IPR023214 HAD-like domain SMGD1_RS09755 c47c162655bd44a543bc17de272b6e01 782 SUPERFAMILY SSF56784 540 773 1.77E-52 T 22-04-2016 IPR023214 HAD-like domain SMGD1_RS09755 c47c162655bd44a543bc17de272b6e01 782 SUPERFAMILY SSF81665 386 479 2.22E-16 T 22-04-2016 SMGD1_RS09755 c47c162655bd44a543bc17de272b6e01 782 SUPERFAMILY SSF81665 722 752 2.22E-16 T 22-04-2016 SMGD1_RS09755 c47c162655bd44a543bc17de272b6e01 782 SUPERFAMILY SSF81665 236 289 2.22E-16 T 22-04-2016 SMGD1_RS09755 c47c162655bd44a543bc17de272b6e01 782 Pfam PF00702 haloacid dehalogenase-like hydrolase 481 687 5.0E-34 T 22-04-2016 SMGD1_RS09755 c47c162655bd44a543bc17de272b6e01 782 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 257 759 8.4E-81 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 SMGD1_RS09755 c47c162655bd44a543bc17de272b6e01 782 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 206 776 3.8E-142 T 22-04-2016 SMGD1_RS13120 51a8fbbf296da5d214afa9d159733248 423 Gene3D G3DSA:3.40.50.2300 1 124 2.0E-35 T 22-04-2016 SMGD1_RS13120 51a8fbbf296da5d214afa9d159733248 423 Pfam PF00072 Response regulator receiver domain 4 118 1.1E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS13120 51a8fbbf296da5d214afa9d159733248 423 SUPERFAMILY SSF52172 1 129 8.54E-35 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS13120 51a8fbbf296da5d214afa9d159733248 423 SUPERFAMILY SSF55073 270 421 1.41E-44 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS13120 51a8fbbf296da5d214afa9d159733248 423 Pfam PF00990 Diguanylate cyclase, GGDEF domain 265 417 1.1E-46 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS13120 51a8fbbf296da5d214afa9d159733248 423 Gene3D G3DSA:3.30.70.270 267 421 6.5E-48 T 22-04-2016 SMGD1_RS13120 51a8fbbf296da5d214afa9d159733248 423 SMART SM00448 2 118 8.8E-34 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS13120 51a8fbbf296da5d214afa9d159733248 423 PANTHER PTHR26402 2 119 1.0E-37 T 22-04-2016 SMGD1_RS13120 51a8fbbf296da5d214afa9d159733248 423 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 262 420 4.5E-46 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS13120 51a8fbbf296da5d214afa9d159733248 423 SMART SM00267 253 422 3.4E-52 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS02040 52c742b3368122d14c27bdab746e1d5e 229 Gene3D G3DSA:3.10.50.40 111 228 1.5E-54 T 22-04-2016 SMGD1_RS02040 52c742b3368122d14c27bdab746e1d5e 229 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 23 130 5.3E-27 T 22-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 SMGD1_RS02040 52c742b3368122d14c27bdab746e1d5e 229 PANTHER PTHR10516 108 229 4.3E-56 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type SMGD1_RS02040 52c742b3368122d14c27bdab746e1d5e 229 PANTHER PTHR10516 33 85 4.3E-56 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type SMGD1_RS02040 52c742b3368122d14c27bdab746e1d5e 229 SUPERFAMILY SSF54534 30 228 6.87E-59 T 22-04-2016 SMGD1_RS02040 52c742b3368122d14c27bdab746e1d5e 229 PANTHER PTHR10516:SF320 108 229 4.3E-56 T 22-04-2016 SMGD1_RS02040 52c742b3368122d14c27bdab746e1d5e 229 PANTHER PTHR10516:SF320 33 85 4.3E-56 T 22-04-2016 SMGD1_RS02040 52c742b3368122d14c27bdab746e1d5e 229 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 137 226 2.3E-28 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 SMGD1_RS02040 52c742b3368122d14c27bdab746e1d5e 229 Gene3D G3DSA:1.10.287.460 24 110 2.3E-25 T 22-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 SMGD1_RS11295 6b7c2c703d0162be9a56ede193281b1e 379 PANTHER PTHR38733 18 377 1.7E-22 T 22-04-2016 SMGD1_RS11295 6b7c2c703d0162be9a56ede193281b1e 379 PANTHER PTHR38733:SF1 18 377 1.7E-22 T 22-04-2016 SMGD1_RS11295 6b7c2c703d0162be9a56ede193281b1e 379 Pfam PF10117 McrBC 5-methylcytosine restriction system component 37 329 5.3E-51 T 22-04-2016 IPR019292 5-methylcytosine restriction system component SMGD1_RS04870 8b3b38d331484b08cbcca9ef3407edf7 132 Gene3D G3DSA:3.30.1370.30 3 71 1.0E-20 T 22-04-2016 SMGD1_RS04870 8b3b38d331484b08cbcca9ef3407edf7 132 SUPERFAMILY SSF56047 4 132 2.62E-39 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 SMGD1_RS04870 8b3b38d331484b08cbcca9ef3407edf7 132 PANTHER PTHR11758:SF4 1 132 4.5E-39 T 22-04-2016 SMGD1_RS04870 8b3b38d331484b08cbcca9ef3407edf7 132 PANTHER PTHR11758 1 132 4.5E-39 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 SMGD1_RS04870 8b3b38d331484b08cbcca9ef3407edf7 132 Gene3D G3DSA:3.30.1490.10 75 132 1.4E-23 T 22-04-2016 SMGD1_RS04870 8b3b38d331484b08cbcca9ef3407edf7 132 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 132 26.11 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 SMGD1_RS04870 8b3b38d331484b08cbcca9ef3407edf7 132 ProSitePatterns PS00053 Ribosomal protein S8 signature. 102 119 - T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 SMGD1_RS04870 8b3b38d331484b08cbcca9ef3407edf7 132 Pfam PF00410 Ribosomal protein S8 5 132 1.4E-42 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 SMGD1_RS00645 a88969891d76e27ed309da157b721538 328 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMGD1_RS00645 a88969891d76e27ed309da157b721538 328 Pfam PF00005 ABC transporter 18 157 7.4E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMGD1_RS00645 a88969891d76e27ed309da157b721538 328 PANTHER PTHR24220 5 240 3.4E-83 T 22-04-2016 SMGD1_RS00645 a88969891d76e27ed309da157b721538 328 SMART SM00382 27 215 3.0E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain SMGD1_RS00645 a88969891d76e27ed309da157b721538 328 Gene3D G3DSA:3.40.50.300 4 227 1.0E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS00645 a88969891d76e27ed309da157b721538 328 SUPERFAMILY SSF52540 4 231 1.56E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS00645 a88969891d76e27ed309da157b721538 328 PANTHER PTHR24220:SF150 5 240 3.4E-83 T 22-04-2016 SMGD1_RS03210 2612eabcd859cd5a379f2bb3d37c5171 411 Gene3D G3DSA:3.60.110.10 222 402 1.3E-9 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 SMGD1_RS03210 2612eabcd859cd5a379f2bb3d37c5171 411 Pfam PF00795 Carbon-nitrogen hydrolase 216 394 3.6E-5 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 SMGD1_RS03210 2612eabcd859cd5a379f2bb3d37c5171 411 PANTHER PTHR23088 181 387 5.3E-14 T 22-04-2016 SMGD1_RS03210 2612eabcd859cd5a379f2bb3d37c5171 411 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 67 410 6.8E-46 T 22-04-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 UniPathway: UPA00666 SMGD1_RS03210 2612eabcd859cd5a379f2bb3d37c5171 411 PANTHER PTHR23088:SF29 181 387 5.3E-14 T 22-04-2016 SMGD1_RS03210 2612eabcd859cd5a379f2bb3d37c5171 411 SUPERFAMILY SSF56317 195 410 6.41E-21 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 SMGD1_RS13660 23c14572171d5649f7b7d37d2ab88109 278 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 6 32 1.9E-51 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 SMGD1_RS13660 23c14572171d5649f7b7d37d2ab88109 278 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 105 132 1.9E-51 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 SMGD1_RS13660 23c14572171d5649f7b7d37d2ab88109 278 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 252 277 1.9E-51 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 SMGD1_RS13660 23c14572171d5649f7b7d37d2ab88109 278 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 38 50 1.9E-51 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 SMGD1_RS13660 23c14572171d5649f7b7d37d2ab88109 278 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 83 105 1.9E-51 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 SMGD1_RS13660 23c14572171d5649f7b7d37d2ab88109 278 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 230 252 1.9E-51 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 SMGD1_RS13660 23c14572171d5649f7b7d37d2ab88109 278 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 6 278 3.1E-111 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 SMGD1_RS13660 23c14572171d5649f7b7d37d2ab88109 278 Gene3D G3DSA:3.40.50.170 82 277 3.2E-50 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SMGD1_RS13660 23c14572171d5649f7b7d37d2ab88109 278 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 1 278 41.861 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 SMGD1_RS13660 23c14572171d5649f7b7d37d2ab88109 278 PANTHER PTHR10520 14 272 4.2E-112 T 22-04-2016 SMGD1_RS13660 23c14572171d5649f7b7d37d2ab88109 278 SUPERFAMILY SSF55021 3 67 1.54E-9 T 22-04-2016 SMGD1_RS13660 23c14572171d5649f7b7d37d2ab88109 278 PIRSF PIRSF036480 1 278 2.7E-106 T 22-04-2016 SMGD1_RS13660 23c14572171d5649f7b7d37d2ab88109 278 PANTHER PTHR10520:SF7 14 272 4.2E-112 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 SMGD1_RS13660 23c14572171d5649f7b7d37d2ab88109 278 Gene3D G3DSA:3.30.70.260 3 67 3.3E-11 T 22-04-2016 SMGD1_RS13660 23c14572171d5649f7b7d37d2ab88109 278 Pfam PF01842 ACT domain 4 67 4.6E-7 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 SMGD1_RS13660 23c14572171d5649f7b7d37d2ab88109 278 SUPERFAMILY SSF53328 83 278 3.53E-54 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SMGD1_RS13660 23c14572171d5649f7b7d37d2ab88109 278 Pfam PF00551 Formyl transferase 82 260 3.5E-43 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SMGD1_RS03345 3da55ed4cb4b490943db3dd52aba121d 1092 SUPERFAMILY SSF52129 843 1042 3.45E-7 T 22-04-2016 IPR029030 Caspase-like domain SMGD1_RS03345 3da55ed4cb4b490943db3dd52aba121d 1092 SUPERFAMILY SSF50978 50 341 1.52E-34 T 22-04-2016 IPR017986 WD40-repeat-containing domain GO:0005515 SMGD1_RS03345 3da55ed4cb4b490943db3dd52aba121d 1092 SMART SM00320 87 126 4.8E-7 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS03345 3da55ed4cb4b490943db3dd52aba121d 1092 SMART SM00320 440 479 3.2E-9 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS03345 3da55ed4cb4b490943db3dd52aba121d 1092 SMART SM00320 401 437 0.2 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS03345 3da55ed4cb4b490943db3dd52aba121d 1092 SMART SM00320 570 605 110.0 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS03345 3da55ed4cb4b490943db3dd52aba121d 1092 SMART SM00320 608 647 1.8E-11 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS03345 3da55ed4cb4b490943db3dd52aba121d 1092 SMART SM00320 273 309 190.0 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS03345 3da55ed4cb4b490943db3dd52aba121d 1092 SMART SM00320 45 84 0.61 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS03345 3da55ed4cb4b490943db3dd52aba121d 1092 PANTHER PTHR22844 33 131 1.0E-53 T 22-04-2016 SMGD1_RS03345 3da55ed4cb4b490943db3dd52aba121d 1092 PANTHER PTHR22844 404 535 1.0E-53 T 22-04-2016 SMGD1_RS03345 3da55ed4cb4b490943db3dd52aba121d 1092 PANTHER PTHR22844 611 654 1.0E-53 T 22-04-2016 SMGD1_RS03345 3da55ed4cb4b490943db3dd52aba121d 1092 Pfam PF00656 Caspase domain 843 1077 3.0E-15 T 22-04-2016 SMGD1_RS03345 3da55ed4cb4b490943db3dd52aba121d 1092 PRINTS PR00320 G protein beta WD-40 repeat signature 113 127 7.9E-7 T 22-04-2016 IPR020472 G-protein beta WD-40 repeat SMGD1_RS03345 3da55ed4cb4b490943db3dd52aba121d 1092 PRINTS PR00320 G protein beta WD-40 repeat signature 634 648 7.9E-7 T 22-04-2016 IPR020472 G-protein beta WD-40 repeat SMGD1_RS03345 3da55ed4cb4b490943db3dd52aba121d 1092 PRINTS PR00320 G protein beta WD-40 repeat signature 466 480 7.9E-7 T 22-04-2016 IPR020472 G-protein beta WD-40 repeat SMGD1_RS03345 3da55ed4cb4b490943db3dd52aba121d 1092 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 113 127 - T 22-04-2016 IPR019775 WD40 repeat, conserved site SMGD1_RS03345 3da55ed4cb4b490943db3dd52aba121d 1092 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 466 480 - T 22-04-2016 IPR019775 WD40 repeat, conserved site SMGD1_RS03345 3da55ed4cb4b490943db3dd52aba121d 1092 SMART SM00564 104 137 510.0 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat SMGD1_RS03345 3da55ed4cb4b490943db3dd52aba121d 1092 SMART SM00564 63 95 130.0 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat SMGD1_RS03345 3da55ed4cb4b490943db3dd52aba121d 1092 SMART SM00564 192 225 9.7 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat SMGD1_RS03345 3da55ed4cb4b490943db3dd52aba121d 1092 SMART SM00564 583 616 100.0 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat SMGD1_RS03345 3da55ed4cb4b490943db3dd52aba121d 1092 Pfam PF00400 WD domain, G-beta repeat 610 647 7.9E-9 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS03345 3da55ed4cb4b490943db3dd52aba121d 1092 Pfam PF00400 WD domain, G-beta repeat 88 126 0.003 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS03345 3da55ed4cb4b490943db3dd52aba121d 1092 Pfam PF00400 WD domain, G-beta repeat 441 479 2.1E-6 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS03345 3da55ed4cb4b490943db3dd52aba121d 1092 Pfam PF00400 WD domain, G-beta repeat 403 436 0.23 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS03345 3da55ed4cb4b490943db3dd52aba121d 1092 SUPERFAMILY SSF50998 284 540 5.41E-56 T 22-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily SMGD1_RS03345 3da55ed4cb4b490943db3dd52aba121d 1092 SUPERFAMILY SSF50998 577 652 5.41E-56 T 22-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily SMGD1_RS03345 3da55ed4cb4b490943db3dd52aba121d 1092 Gene3D G3DSA:2.130.10.10 372 531 1.2E-28 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 SMGD1_RS03345 3da55ed4cb4b490943db3dd52aba121d 1092 Gene3D G3DSA:3.40.50.1460 840 980 1.4E-13 T 22-04-2016 IPR029030 Caspase-like domain SMGD1_RS03345 3da55ed4cb4b490943db3dd52aba121d 1092 Gene3D G3DSA:2.130.10.10 48 341 5.9E-34 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 SMGD1_RS03345 3da55ed4cb4b490943db3dd52aba121d 1092 Gene3D G3DSA:2.130.10.10 532 673 1.3E-23 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 SMGD1_RS02195 b24fa3395b1bfd5f3fcd4dc49aded285 218 Pfam PF00072 Response regulator receiver domain 3 112 3.6E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS02195 b24fa3395b1bfd5f3fcd4dc49aded285 218 SMART SM00862 145 215 4.3E-9 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMGD1_RS02195 b24fa3395b1bfd5f3fcd4dc49aded285 218 PANTHER PTHR26402 1 214 1.6E-44 T 22-04-2016 SMGD1_RS02195 b24fa3395b1bfd5f3fcd4dc49aded285 218 SMART SM00448 1 112 5.9E-34 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS02195 b24fa3395b1bfd5f3fcd4dc49aded285 218 Gene3D G3DSA:3.40.50.2300 1 144 4.4E-33 T 22-04-2016 SMGD1_RS02195 b24fa3395b1bfd5f3fcd4dc49aded285 218 SUPERFAMILY SSF52172 1 178 2.42E-35 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS02195 b24fa3395b1bfd5f3fcd4dc49aded285 218 Gene3D G3DSA:1.10.10.10 145 216 3.9E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMGD1_RS02195 b24fa3395b1bfd5f3fcd4dc49aded285 218 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 215 1.5E-11 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMGD1_RS02680 2b1815ea8028812f7d38ea10cf22b893 617 SUPERFAMILY SSF55073 449 608 1.1E-46 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS02680 2b1815ea8028812f7d38ea10cf22b893 617 Gene3D G3DSA:3.30.70.270 446 612 1.0E-50 T 22-04-2016 SMGD1_RS02680 2b1815ea8028812f7d38ea10cf22b893 617 SMART SM00267 433 606 4.8E-56 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS02680 2b1815ea8028812f7d38ea10cf22b893 617 PANTHER PTHR10799:SF774 299 601 7.5E-21 T 22-04-2016 SMGD1_RS02680 2b1815ea8028812f7d38ea10cf22b893 617 PANTHER PTHR10799:SF774 1 17 7.5E-21 T 22-04-2016 SMGD1_RS02680 2b1815ea8028812f7d38ea10cf22b893 617 PANTHER PTHR10799 299 601 7.5E-21 T 22-04-2016 SMGD1_RS02680 2b1815ea8028812f7d38ea10cf22b893 617 PANTHER PTHR10799 1 17 7.5E-21 T 22-04-2016 SMGD1_RS02680 2b1815ea8028812f7d38ea10cf22b893 617 Pfam PF00990 Diguanylate cyclase, GGDEF domain 446 602 5.6E-47 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS02680 2b1815ea8028812f7d38ea10cf22b893 617 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 441 604 2.5E-54 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS08015 ebc78d6a4facc5c2718279a4892f5e6e 301 SMART SM00387 192 301 1.7E-16 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS08015 ebc78d6a4facc5c2718279a4892f5e6e 301 PRINTS PR00344 Bacterial sensor protein C-terminal signature 287 300 7.0E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS08015 ebc78d6a4facc5c2718279a4892f5e6e 301 PRINTS PR00344 Bacterial sensor protein C-terminal signature 251 261 7.0E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS08015 ebc78d6a4facc5c2718279a4892f5e6e 301 PRINTS PR00344 Bacterial sensor protein C-terminal signature 233 247 7.0E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS08015 ebc78d6a4facc5c2718279a4892f5e6e 301 PRINTS PR00344 Bacterial sensor protein C-terminal signature 264 282 7.0E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS08015 ebc78d6a4facc5c2718279a4892f5e6e 301 SMART SM00388 82 152 1.2E-4 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS08015 ebc78d6a4facc5c2718279a4892f5e6e 301 Gene3D G3DSA:3.30.565.10 154 299 2.1E-30 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS08015 ebc78d6a4facc5c2718279a4892f5e6e 301 SUPERFAMILY SSF47384 73 150 9.81E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS08015 ebc78d6a4facc5c2718279a4892f5e6e 301 SUPERFAMILY SSF55874 152 300 1.83E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS08015 ebc78d6a4facc5c2718279a4892f5e6e 301 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 196 293 6.1E-15 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS08015 ebc78d6a4facc5c2718279a4892f5e6e 301 PANTHER PTHR24423 57 299 4.8E-34 T 22-04-2016 SMGD1_RS08015 ebc78d6a4facc5c2718279a4892f5e6e 301 Gene3D G3DSA:1.10.287.130 75 146 1.6E-5 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS08015 ebc78d6a4facc5c2718279a4892f5e6e 301 PANTHER PTHR24423:SF485 57 299 4.8E-34 T 22-04-2016 SMGD1_RS09215 e4bfb239d00bb8518693573b6802e29d 124 SMART SM00448 1 116 1.1E-34 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS09215 e4bfb239d00bb8518693573b6802e29d 124 Pfam PF00072 Response regulator receiver domain 4 116 7.2E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS09215 e4bfb239d00bb8518693573b6802e29d 124 SUPERFAMILY SSF52172 2 121 1.17E-33 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS09215 e4bfb239d00bb8518693573b6802e29d 124 Gene3D G3DSA:3.40.50.2300 2 120 1.9E-33 T 22-04-2016 SMGD1_RS09215 e4bfb239d00bb8518693573b6802e29d 124 PANTHER PTHR26402 1 120 1.5E-38 T 22-04-2016 SMGD1_RS06395 39c2f4a2f2aa446df52949ee254061c1 574 SUPERFAMILY SSF141868 322 568 8.37E-85 T 22-04-2016 IPR001633 EAL domain SMGD1_RS06395 39c2f4a2f2aa446df52949ee254061c1 574 Gene3D G3DSA:3.30.450.20 8 123 2.1E-10 T 22-04-2016 SMGD1_RS06395 39c2f4a2f2aa446df52949ee254061c1 574 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 16 133 4.1E-9 T 22-04-2016 IPR000014 PAS domain SMGD1_RS06395 39c2f4a2f2aa446df52949ee254061c1 574 Pfam PF00990 Diguanylate cyclase, GGDEF domain 144 301 2.0E-49 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS06395 39c2f4a2f2aa446df52949ee254061c1 574 SMART SM00052 315 561 2.4E-106 T 22-04-2016 IPR001633 EAL domain SMGD1_RS06395 39c2f4a2f2aa446df52949ee254061c1 574 SUPERFAMILY SSF55073 149 307 6.43E-50 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS06395 39c2f4a2f2aa446df52949ee254061c1 574 Gene3D G3DSA:3.20.20.450 319 569 4.3E-93 T 22-04-2016 IPR001633 EAL domain SMGD1_RS06395 39c2f4a2f2aa446df52949ee254061c1 574 SUPERFAMILY SSF55785 27 135 1.08E-12 T 22-04-2016 IPR000014 PAS domain SMGD1_RS06395 39c2f4a2f2aa446df52949ee254061c1 574 Gene3D G3DSA:3.30.70.270 145 311 1.5E-55 T 22-04-2016 SMGD1_RS06395 39c2f4a2f2aa446df52949ee254061c1 574 Pfam PF00563 EAL domain 322 556 1.9E-70 T 22-04-2016 IPR001633 EAL domain SMGD1_RS06395 39c2f4a2f2aa446df52949ee254061c1 574 SMART SM00267 133 305 4.2E-64 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS06395 39c2f4a2f2aa446df52949ee254061c1 574 PANTHER PTHR10799 3 81 1.0E-86 T 22-04-2016 SMGD1_RS06395 39c2f4a2f2aa446df52949ee254061c1 574 PANTHER PTHR10799 177 415 1.0E-86 T 22-04-2016 SMGD1_RS06395 39c2f4a2f2aa446df52949ee254061c1 574 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 140 303 8.8E-47 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS06395 39c2f4a2f2aa446df52949ee254061c1 574 PANTHER PTHR10799:SF774 3 81 1.0E-86 T 22-04-2016 SMGD1_RS06395 39c2f4a2f2aa446df52949ee254061c1 574 PANTHER PTHR10799:SF774 177 415 1.0E-86 T 22-04-2016 SMGD1_RS07010 bfc477f2c243e77754a416d1a1384fc6 333 Pfam PF00571 CBS domain 229 281 6.0E-7 T 22-04-2016 IPR000644 CBS domain SMGD1_RS07010 bfc477f2c243e77754a416d1a1384fc6 333 Pfam PF01595 Domain of unknown function DUF21 4 146 3.8E-25 T 22-04-2016 IPR002550 Domain of unknown function DUF21 SMGD1_RS07010 bfc477f2c243e77754a416d1a1384fc6 333 Gene3D G3DSA:3.10.580.10 148 282 1.4E-12 T 22-04-2016 SMGD1_RS07010 bfc477f2c243e77754a416d1a1384fc6 333 SUPERFAMILY SSF54631 149 282 2.83E-22 T 22-04-2016 SMGD1_RS07010 bfc477f2c243e77754a416d1a1384fc6 333 PANTHER PTHR22777:SF4 2 305 1.6E-76 T 22-04-2016 SMGD1_RS07010 bfc477f2c243e77754a416d1a1384fc6 333 PANTHER PTHR22777 2 305 1.6E-76 T 22-04-2016 SMGD1_RS06490 3f079056a40e7b934145d4026efcafee 766 SUPERFAMILY SSF55785 282 379 2.97E-24 T 22-04-2016 IPR000014 PAS domain SMGD1_RS06490 3f079056a40e7b934145d4026efcafee 766 SUPERFAMILY SSF55874 452 622 1.22E-44 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS06490 3f079056a40e7b934145d4026efcafee 766 Gene3D G3DSA:3.30.565.10 449 624 1.0E-44 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS06490 3f079056a40e7b934145d4026efcafee 766 Gene3D G3DSA:1.10.287.130 394 448 6.4E-20 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS06490 3f079056a40e7b934145d4026efcafee 766 PRINTS PR00344 Bacterial sensor protein C-terminal signature 606 619 9.4E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS06490 3f079056a40e7b934145d4026efcafee 766 PRINTS PR00344 Bacterial sensor protein C-terminal signature 582 600 9.4E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS06490 3f079056a40e7b934145d4026efcafee 766 PRINTS PR00344 Bacterial sensor protein C-terminal signature 565 575 9.4E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS06490 3f079056a40e7b934145d4026efcafee 766 PRINTS PR00344 Bacterial sensor protein C-terminal signature 547 561 9.4E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS06490 3f079056a40e7b934145d4026efcafee 766 SMART SM00091 269 338 1.5E-6 T 22-04-2016 IPR000014 PAS domain SMGD1_RS06490 3f079056a40e7b934145d4026efcafee 766 SMART SM00387 510 622 8.5E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS06490 3f079056a40e7b934145d4026efcafee 766 SUPERFAMILY SSF52172 646 763 3.27E-31 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS06490 3f079056a40e7b934145d4026efcafee 766 SUPERFAMILY SSF47384 383 464 3.53E-22 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS06490 3f079056a40e7b934145d4026efcafee 766 Gene3D G3DSA:3.30.450.20 284 384 9.6E-23 T 22-04-2016 SMGD1_RS06490 3f079056a40e7b934145d4026efcafee 766 Pfam PF08447 PAS fold 294 378 9.1E-14 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 SMGD1_RS06490 3f079056a40e7b934145d4026efcafee 766 SMART SM00388 398 463 2.7E-24 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS06490 3f079056a40e7b934145d4026efcafee 766 Gene3D G3DSA:3.40.50.2300 647 765 3.1E-34 T 22-04-2016 SMGD1_RS06490 3f079056a40e7b934145d4026efcafee 766 Pfam PF00512 His Kinase A (phospho-acceptor) domain 398 463 6.0E-20 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS06490 3f079056a40e7b934145d4026efcafee 766 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 271 389 3.8E-14 T 22-04-2016 IPR000014 PAS domain SMGD1_RS06490 3f079056a40e7b934145d4026efcafee 766 PANTHER PTHR24423 267 766 5.0E-146 T 22-04-2016 SMGD1_RS06490 3f079056a40e7b934145d4026efcafee 766 PANTHER PTHR24423 173 192 5.0E-146 T 22-04-2016 SMGD1_RS06490 3f079056a40e7b934145d4026efcafee 766 PANTHER PTHR24423 3 12 5.0E-146 T 22-04-2016 SMGD1_RS06490 3f079056a40e7b934145d4026efcafee 766 Pfam PF00072 Response regulator receiver domain 648 758 1.4E-21 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS06490 3f079056a40e7b934145d4026efcafee 766 SMART SM00448 646 758 3.2E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS06490 3f079056a40e7b934145d4026efcafee 766 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 511 620 9.4E-26 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS03170 0a56cce210893f286a2698cda9cf51cf 816 Gene3D G3DSA:1.10.730.10 613 736 2.2E-23 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMGD1_RS03170 0a56cce210893f286a2698cda9cf51cf 816 Pfam PF09334 tRNA synthetases class I (M) 34 178 4.3E-18 T 22-04-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMGD1_RS03170 0a56cce210893f286a2698cda9cf51cf 816 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 3 815 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SMGD1_RS03170 0a56cce210893f286a2698cda9cf51cf 816 Gene3D G3DSA:3.40.50.620 422 612 3.9E-145 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMGD1_RS03170 0a56cce210893f286a2698cda9cf51cf 816 Gene3D G3DSA:3.40.50.620 2 225 3.9E-145 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMGD1_RS03170 0a56cce210893f286a2698cda9cf51cf 816 PANTHER PTHR11946:SF7 293 814 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SMGD1_RS03170 0a56cce210893f286a2698cda9cf51cf 816 Gene3D G3DSA:3.90.740.10 309 421 9.7E-41 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 SMGD1_RS03170 0a56cce210893f286a2698cda9cf51cf 816 Gene3D G3DSA:3.90.740.10 239 275 9.7E-41 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 SMGD1_RS03170 0a56cce210893f286a2698cda9cf51cf 816 SUPERFAMILY SSF52374 3 225 2.7E-136 T 22-04-2016 SMGD1_RS03170 0a56cce210893f286a2698cda9cf51cf 816 SUPERFAMILY SSF52374 421 632 2.7E-136 T 22-04-2016 SMGD1_RS03170 0a56cce210893f286a2698cda9cf51cf 816 PANTHER PTHR11946 2 204 0.0 T 22-04-2016 SMGD1_RS03170 0a56cce210893f286a2698cda9cf51cf 816 PANTHER PTHR11946 293 814 0.0 T 22-04-2016 SMGD1_RS03170 0a56cce210893f286a2698cda9cf51cf 816 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 40 51 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMGD1_RS03170 0a56cce210893f286a2698cda9cf51cf 816 SUPERFAMILY SSF50677 244 420 1.05E-45 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 SMGD1_RS03170 0a56cce210893f286a2698cda9cf51cf 816 PANTHER PTHR11946 247 272 0.0 T 22-04-2016 SMGD1_RS03170 0a56cce210893f286a2698cda9cf51cf 816 SUPERFAMILY SSF47323 626 815 1.5E-16 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMGD1_RS03170 0a56cce210893f286a2698cda9cf51cf 816 PANTHER PTHR11946:SF7 2 204 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SMGD1_RS03170 0a56cce210893f286a2698cda9cf51cf 816 PANTHER PTHR11946:SF7 247 272 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SMGD1_RS03170 0a56cce210893f286a2698cda9cf51cf 816 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 422 623 1.0E-24 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMGD1_RS03170 0a56cce210893f286a2698cda9cf51cf 816 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 2 814 21.002 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SMGD1_RS03170 0a56cce210893f286a2698cda9cf51cf 816 PRINTS PR00985 Leucyl-tRNA synthetase signature 214 233 4.7E-42 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SMGD1_RS03170 0a56cce210893f286a2698cda9cf51cf 816 PRINTS PR00985 Leucyl-tRNA synthetase signature 151 167 4.7E-42 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SMGD1_RS03170 0a56cce210893f286a2698cda9cf51cf 816 PRINTS PR00985 Leucyl-tRNA synthetase signature 566 576 4.7E-42 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SMGD1_RS03170 0a56cce210893f286a2698cda9cf51cf 816 PRINTS PR00985 Leucyl-tRNA synthetase signature 492 510 4.7E-42 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SMGD1_RS03170 0a56cce210893f286a2698cda9cf51cf 816 PRINTS PR00985 Leucyl-tRNA synthetase signature 183 196 4.7E-42 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SMGD1_RS03170 0a56cce210893f286a2698cda9cf51cf 816 PRINTS PR00985 Leucyl-tRNA synthetase signature 533 555 4.7E-42 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SMGD1_RS03170 0a56cce210893f286a2698cda9cf51cf 816 PRINTS PR00985 Leucyl-tRNA synthetase signature 125 142 4.7E-42 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SMGD1_RS03170 0a56cce210893f286a2698cda9cf51cf 816 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 220 408 1.9E-61 T 22-04-2016 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 SMGD1_RS10205 c77edce5623314a199b8dbfc7a37e87e 469 Pfam PF00069 Protein kinase domain 153 252 4.9E-10 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 SMGD1_RS10205 c77edce5623314a199b8dbfc7a37e87e 469 Gene3D G3DSA:1.10.510.10 164 249 4.4E-13 T 22-04-2016 SMGD1_RS10205 c77edce5623314a199b8dbfc7a37e87e 469 SMART SM00220 12 307 5.0E-4 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 SMGD1_RS10205 c77edce5623314a199b8dbfc7a37e87e 469 SUPERFAMILY SSF56112 7 81 8.26E-20 T 22-04-2016 IPR011009 Protein kinase-like domain SMGD1_RS10205 c77edce5623314a199b8dbfc7a37e87e 469 SUPERFAMILY SSF56112 126 248 8.26E-20 T 22-04-2016 IPR011009 Protein kinase-like domain SMGD1_RS10205 c77edce5623314a199b8dbfc7a37e87e 469 Gene3D G3DSA:3.30.200.20 10 102 3.2E-4 T 22-04-2016 SMGD1_RS10205 c77edce5623314a199b8dbfc7a37e87e 469 Gene3D G3DSA:3.30.200.20 146 163 3.2E-4 T 22-04-2016 SMGD1_RS11550 f79d7678201c4fa8885ce1e931bf1825 442 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 3 442 4.1E-185 T 22-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 SMGD1_RS11550 f79d7678201c4fa8885ce1e931bf1825 442 Gene3D G3DSA:1.10.8.10 211 241 5.3E-15 T 22-04-2016 SMGD1_RS11550 f79d7678201c4fa8885ce1e931bf1825 442 Gene3D G3DSA:1.10.8.10 110 175 5.3E-15 T 22-04-2016 SMGD1_RS11550 f79d7678201c4fa8885ce1e931bf1825 442 PANTHER PTHR11262 2 104 4.0E-172 T 22-04-2016 SMGD1_RS11550 f79d7678201c4fa8885ce1e931bf1825 442 PANTHER PTHR11262 216 442 4.0E-172 T 22-04-2016 SMGD1_RS11550 f79d7678201c4fa8885ce1e931bf1825 442 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 334 404 1.1E-6 T 22-04-2016 IPR019489 Clp ATPase, C-terminal SMGD1_RS11550 f79d7678201c4fa8885ce1e931bf1825 442 SUPERFAMILY SSF52540 2 438 1.01E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS11550 f79d7678201c4fa8885ce1e931bf1825 442 PANTHER PTHR11262:SF3 2 104 4.0E-172 T 22-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 SMGD1_RS11550 f79d7678201c4fa8885ce1e931bf1825 442 PANTHER PTHR11262:SF3 216 442 4.0E-172 T 22-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 SMGD1_RS11550 f79d7678201c4fa8885ce1e931bf1825 442 Pfam PF07724 AAA domain (Cdc48 subfamily) 189 327 1.1E-37 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SMGD1_RS11550 f79d7678201c4fa8885ce1e931bf1825 442 Pfam PF07724 AAA domain (Cdc48 subfamily) 51 115 2.1E-7 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SMGD1_RS11550 f79d7678201c4fa8885ce1e931bf1825 442 Gene3D G3DSA:3.40.50.300 243 330 1.2E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS11550 f79d7678201c4fa8885ce1e931bf1825 442 Gene3D G3DSA:3.40.50.300 3 109 1.2E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS11550 f79d7678201c4fa8885ce1e931bf1825 442 Gene3D G3DSA:1.10.8.60 333 442 1.8E-33 T 22-04-2016 SMGD1_RS11550 f79d7678201c4fa8885ce1e931bf1825 442 SMART SM01086 334 430 4.0E-18 T 22-04-2016 IPR019489 Clp ATPase, C-terminal SMGD1_RS11550 f79d7678201c4fa8885ce1e931bf1825 442 SMART SM00382 48 331 4.1E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain SMGD1_RS12560 e221e44c7140c063fe9697d369991996 298 Gene3D G3DSA:1.20.1330.10 2 47 2.1E-37 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SMGD1_RS12560 e221e44c7140c063fe9697d369991996 298 Gene3D G3DSA:1.20.1330.10 166 250 2.1E-37 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SMGD1_RS12560 e221e44c7140c063fe9697d369991996 298 Pfam PF00700 Bacterial flagellin C-terminal helical region 210 294 1.0E-25 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SMGD1_RS12560 e221e44c7140c063fe9697d369991996 298 SUPERFAMILY SSF64518 2 294 4.18E-42 T 22-04-2016 SMGD1_RS12560 e221e44c7140c063fe9697d369991996 298 PANTHER PTHR30244 127 294 2.5E-43 T 22-04-2016 SMGD1_RS12560 e221e44c7140c063fe9697d369991996 298 PANTHER PTHR30244:SF1 127 294 2.5E-43 T 22-04-2016 SMGD1_RS12560 e221e44c7140c063fe9697d369991996 298 PANTHER PTHR30244 2 82 2.5E-43 T 22-04-2016 SMGD1_RS12560 e221e44c7140c063fe9697d369991996 298 Pfam PF00669 Bacterial flagellin N-terminal helical region 2 48 3.1E-9 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SMGD1_RS12560 e221e44c7140c063fe9697d369991996 298 PANTHER PTHR30244:SF1 2 82 2.5E-43 T 22-04-2016 SMGD1_RS13810 af3d8c8ec68a61af8a60dfabe25e55d6 145 SUPERFAMILY SSF89623 2 143 1.7E-56 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 SMGD1_RS13810 af3d8c8ec68a61af8a60dfabe25e55d6 145 TIGRFAM TIGR01120 rpiB: ribose 5-phosphate isomerase B 3 143 2.9E-57 T 22-04-2016 IPR004785 Ribose 5-phosphate isomerase B GO:0004751|GO:0006098 SMGD1_RS13810 af3d8c8ec68a61af8a60dfabe25e55d6 145 Pfam PF02502 Ribose/Galactose Isomerase 4 140 3.1E-52 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 SMGD1_RS13810 af3d8c8ec68a61af8a60dfabe25e55d6 145 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 4 143 2.6E-57 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 SMGD1_RS13810 af3d8c8ec68a61af8a60dfabe25e55d6 145 PANTHER PTHR30345 1 143 1.3E-64 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 SMGD1_RS13810 af3d8c8ec68a61af8a60dfabe25e55d6 145 PIRSF PIRSF005384 1 145 5.2E-55 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 SMGD1_RS13810 af3d8c8ec68a61af8a60dfabe25e55d6 145 Gene3D G3DSA:3.40.1400.10 2 144 2.8E-61 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 SMGD1_RS02165 c70e1df86668b4b77748e2dccc1e6fd2 205 SMART SM00479 34 205 1.9E-26 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III SMGD1_RS02165 c70e1df86668b4b77748e2dccc1e6fd2 205 PANTHER PTHR30231 1 203 3.3E-73 T 22-04-2016 SMGD1_RS02165 c70e1df86668b4b77748e2dccc1e6fd2 205 SUPERFAMILY SSF53098 33 203 3.17E-39 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMGD1_RS02165 c70e1df86668b4b77748e2dccc1e6fd2 205 Pfam PF00929 Exonuclease 36 198 5.1E-25 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III SMGD1_RS02165 c70e1df86668b4b77748e2dccc1e6fd2 205 Gene3D G3DSA:3.30.420.10 33 204 5.1E-41 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMGD1_RS02165 c70e1df86668b4b77748e2dccc1e6fd2 205 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 34 203 1.7E-21 T 22-04-2016 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMGD1_RS02165 c70e1df86668b4b77748e2dccc1e6fd2 205 PANTHER PTHR30231:SF7 1 203 3.3E-73 T 22-04-2016 SMGD1_RS12600 d17d4dd5b1a4994d8d98733634155cf2 306 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 22 300 5.8E-90 T 22-04-2016 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 SMGD1_RS12600 d17d4dd5b1a4994d8d98733634155cf2 306 PANTHER PTHR11061 2 301 1.1E-62 T 22-04-2016 SMGD1_RS12600 d17d4dd5b1a4994d8d98733634155cf2 306 PANTHER PTHR11061:SF34 2 301 1.1E-62 T 22-04-2016 SMGD1_RS12600 d17d4dd5b1a4994d8d98733634155cf2 306 Gene3D G3DSA:3.40.50.150 76 301 1.6E-52 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS12600 d17d4dd5b1a4994d8d98733634155cf2 306 SUPERFAMILY SSF53335 4 272 4.28E-45 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS11610 d7607c315c9b7d0d00e8cd3b66d4c3f3 180 Gene3D G3DSA:2.40.160.20 15 172 3.3E-17 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 SMGD1_RS11610 d7607c315c9b7d0d00e8cd3b66d4c3f3 180 Pfam PF13505 Outer membrane protein beta-barrel domain 7 165 4.5E-15 T 22-04-2016 IPR027385 Outer membrane protein beta-barrel SMGD1_RS11610 d7607c315c9b7d0d00e8cd3b66d4c3f3 180 SUPERFAMILY SSF56925 16 180 3.4E-16 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 SMGD1_RS12605 b39ef3b229e3d8cc5333d75a6ca7248c 466 PANTHER PTHR10890 2 466 6.7E-173 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 SMGD1_RS12605 b39ef3b229e3d8cc5333d75a6ca7248c 466 Gene3D G3DSA:3.40.50.620 19 309 1.8E-97 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMGD1_RS12605 b39ef3b229e3d8cc5333d75a6ca7248c 466 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 60 69 3.2E-26 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 SMGD1_RS12605 b39ef3b229e3d8cc5333d75a6ca7248c 466 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 226 247 3.2E-26 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 SMGD1_RS12605 b39ef3b229e3d8cc5333d75a6ca7248c 466 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 190 208 3.2E-26 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 SMGD1_RS12605 b39ef3b229e3d8cc5333d75a6ca7248c 466 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 24 35 3.2E-26 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 SMGD1_RS12605 b39ef3b229e3d8cc5333d75a6ca7248c 466 SUPERFAMILY SSF47323 320 465 2.48E-26 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMGD1_RS12605 b39ef3b229e3d8cc5333d75a6ca7248c 466 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 1 466 35.382 T 22-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 SMGD1_RS12605 b39ef3b229e3d8cc5333d75a6ca7248c 466 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 1 465 9.1E-156 T 22-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 SMGD1_RS12605 b39ef3b229e3d8cc5333d75a6ca7248c 466 Gene3D G3DSA:1.20.120.640 312 399 5.0E-9 T 22-04-2016 SMGD1_RS12605 b39ef3b229e3d8cc5333d75a6ca7248c 466 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 14 317 6.5E-121 T 22-04-2016 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 SMGD1_RS12605 b39ef3b229e3d8cc5333d75a6ca7248c 466 SUPERFAMILY SSF52374 3 314 4.29E-88 T 22-04-2016 SMGD1_RS11250 06ccb36c9585ca163b85603f287e7acb 184 TIGRFAM TIGR00140 hupD: hydrogenase expression/formation protein 3 155 1.7E-45 T 22-04-2016 IPR004419 Peptidase A31, hydrogenase expression/formation protein GO:0016485|GO:0046872 SMGD1_RS11250 06ccb36c9585ca163b85603f287e7acb 184 TIGRFAM TIGR00072 hydrog_prot: hydrogenase maturation protease 4 152 3.5E-36 T 22-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 SMGD1_RS11250 06ccb36c9585ca163b85603f287e7acb 184 SUPERFAMILY SSF53163 1 161 2.43E-39 T 22-04-2016 IPR023430 Peptidase HybD-like domain SMGD1_RS11250 06ccb36c9585ca163b85603f287e7acb 184 Gene3D G3DSA:3.40.50.1450 1 161 2.7E-49 T 22-04-2016 IPR023430 Peptidase HybD-like domain SMGD1_RS11250 06ccb36c9585ca163b85603f287e7acb 184 Pfam PF01750 Hydrogenase maturation protease 20 150 4.0E-29 T 22-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 SMGD1_RS11250 06ccb36c9585ca163b85603f287e7acb 184 PANTHER PTHR30302 1 168 2.6E-39 T 22-04-2016 SMGD1_RS11250 06ccb36c9585ca163b85603f287e7acb 184 PANTHER PTHR30302:SF1 1 168 2.6E-39 T 22-04-2016 SMGD1_RS11250 06ccb36c9585ca163b85603f287e7acb 184 PRINTS PR00446 Hydrogen uptake protein signature 3 15 1.3E-13 T 22-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 SMGD1_RS11250 06ccb36c9585ca163b85603f287e7acb 184 PRINTS PR00446 Hydrogen uptake protein signature 59 69 1.3E-13 T 22-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 SMGD1_RS11250 06ccb36c9585ca163b85603f287e7acb 184 PRINTS PR00446 Hydrogen uptake protein signature 38 55 1.3E-13 T 22-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 SMGD1_RS11250 06ccb36c9585ca163b85603f287e7acb 184 PRINTS PR00446 Hydrogen uptake protein signature 15 26 1.3E-13 T 22-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 SMGD1_RS05465 674e461fc4b19d03affb48b4a03ed965 365 PANTHER PTHR30097:SF4 34 297 6.5E-24 T 22-04-2016 SMGD1_RS05465 674e461fc4b19d03affb48b4a03ed965 365 PANTHER PTHR30097:SF4 316 358 6.5E-24 T 22-04-2016 SMGD1_RS05465 674e461fc4b19d03affb48b4a03ed965 365 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 32 240 4.7E-13 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SMGD1_RS05465 674e461fc4b19d03affb48b4a03ed965 365 PANTHER PTHR30097 34 297 6.5E-24 T 22-04-2016 SMGD1_RS05465 674e461fc4b19d03affb48b4a03ed965 365 PANTHER PTHR30097 316 358 6.5E-24 T 22-04-2016 SMGD1_RS05465 674e461fc4b19d03affb48b4a03ed965 365 Gene3D G3DSA:2.40.50.100 45 78 1.0E-5 T 22-04-2016 SMGD1_RS05465 674e461fc4b19d03affb48b4a03ed965 365 Gene3D G3DSA:2.40.50.100 153 188 1.0E-5 T 22-04-2016 SMGD1_RS05465 674e461fc4b19d03affb48b4a03ed965 365 SUPERFAMILY SSF111369 49 144 4.18E-6 T 22-04-2016 SMGD1_RS02355 936256b4a31b598bf14b31df30c7f92c 361 Gene3D G3DSA:3.40.640.10 12 242 5.9E-80 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SMGD1_RS02355 936256b4a31b598bf14b31df30c7f92c 361 PIRSF PIRSF000390 4 361 4.5E-100 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase SMGD1_RS02355 936256b4a31b598bf14b31df30c7f92c 361 PANTHER PTHR30244 1 361 1.5E-112 T 22-04-2016 SMGD1_RS02355 936256b4a31b598bf14b31df30c7f92c 361 Gene3D G3DSA:3.90.1150.10 244 359 2.4E-27 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SMGD1_RS02355 936256b4a31b598bf14b31df30c7f92c 361 PANTHER PTHR30244:SF15 1 361 1.5E-112 T 22-04-2016 SMGD1_RS02355 936256b4a31b598bf14b31df30c7f92c 361 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 17 356 1.2E-112 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase SMGD1_RS02355 936256b4a31b598bf14b31df30c7f92c 361 SUPERFAMILY SSF53383 13 359 2.61E-106 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SMGD1_RS11845 e05313fdbbf4b531a221f12d56fcf9c3 301 Gene3D G3DSA:2.40.230.10 43 301 5.9E-70 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 SMGD1_RS11845 e05313fdbbf4b531a221f12d56fcf9c3 301 SUPERFAMILY SSF56931 46 300 3.4E-63 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 SMGD1_RS11845 e05313fdbbf4b531a221f12d56fcf9c3 301 Pfam PF02253 Phospholipase A1 49 299 3.7E-62 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 SMGD1_RS11845 e05313fdbbf4b531a221f12d56fcf9c3 301 PRINTS PR01486 Bacterial phospholipase A1 protein signature 272 292 1.3E-20 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 SMGD1_RS11845 e05313fdbbf4b531a221f12d56fcf9c3 301 PRINTS PR01486 Bacterial phospholipase A1 protein signature 102 118 1.3E-20 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 SMGD1_RS11845 e05313fdbbf4b531a221f12d56fcf9c3 301 PRINTS PR01486 Bacterial phospholipase A1 protein signature 153 167 1.3E-20 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 SMGD1_RS11845 e05313fdbbf4b531a221f12d56fcf9c3 301 PRINTS PR01486 Bacterial phospholipase A1 protein signature 80 97 1.3E-20 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 SMGD1_RS11845 e05313fdbbf4b531a221f12d56fcf9c3 301 PRINTS PR01486 Bacterial phospholipase A1 protein signature 123 142 1.3E-20 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 SMGD1_RS11845 e05313fdbbf4b531a221f12d56fcf9c3 301 PANTHER PTHR40457 52 301 1.1E-43 T 22-04-2016 SMGD1_RS11915 ebfd476ff051da6c391aacbc13d81176 192 Pfam PF13972 Bacterial transcriptional repressor 70 191 3.2E-14 T 22-04-2016 IPR025722 Bacterial transcriptional repressor TetR SMGD1_RS11915 ebfd476ff051da6c391aacbc13d81176 192 PANTHER PTHR30055 1 159 5.1E-20 T 22-04-2016 SMGD1_RS11915 ebfd476ff051da6c391aacbc13d81176 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 51 1.8E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SMGD1_RS11915 ebfd476ff051da6c391aacbc13d81176 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 7 20 1.8E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SMGD1_RS11915 ebfd476ff051da6c391aacbc13d81176 192 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 50 6.4E-11 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SMGD1_RS11915 ebfd476ff051da6c391aacbc13d81176 192 PANTHER PTHR30055:SF30 1 159 5.1E-20 T 22-04-2016 SMGD1_RS11915 ebfd476ff051da6c391aacbc13d81176 192 SUPERFAMILY SSF46689 3 71 2.92E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SMGD1_RS11915 ebfd476ff051da6c391aacbc13d81176 192 Gene3D G3DSA:1.10.357.10 2 190 7.3E-21 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SMGD1_RS11625 653d97b747514151d23d93c91f33dfcc 348 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 12 166 4.1E-40 T 22-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMGD1_RS11625 653d97b747514151d23d93c91f33dfcc 348 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 185 325 5.3E-12 T 22-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMGD1_RS11625 653d97b747514151d23d93c91f33dfcc 348 SUPERFAMILY SSF55120 12 328 4.17E-69 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMGD1_RS11625 653d97b747514151d23d93c91f33dfcc 348 ProSitePatterns PS01268 Uncharacterized protein family UPF0024 signature. 75 88 - T 22-04-2016 IPR020119 Pseudouridine synthase TruD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMGD1_RS11625 653d97b747514151d23d93c91f33dfcc 348 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 3 332 23.711 T 22-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMGD1_RS11625 653d97b747514151d23d93c91f33dfcc 348 PANTHER PTHR13326 22 165 8.6E-33 T 22-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMGD1_RS08600 2f1c876f3ec2f97ece27f6065b948c20 207 Hamap MF_00328 Guanylate kinase [gmk]. 3 187 34.479 T 22-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 SMGD1_RS08600 2f1c876f3ec2f97ece27f6065b948c20 207 ProSitePatterns PS00856 Guanylate kinase-like signature. 39 56 - T 22-04-2016 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 SMGD1_RS08600 2f1c876f3ec2f97ece27f6065b948c20 207 SMART SM00072 4 187 3.7E-50 T 22-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit SMGD1_RS08600 2f1c876f3ec2f97ece27f6065b948c20 207 SUPERFAMILY SSF52540 4 189 8.77E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS08600 2f1c876f3ec2f97ece27f6065b948c20 207 PANTHER PTHR23117 8 190 5.0E-74 T 22-04-2016 SMGD1_RS08600 2f1c876f3ec2f97ece27f6065b948c20 207 Pfam PF00625 Guanylate kinase 7 182 7.1E-46 T 22-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit SMGD1_RS08600 2f1c876f3ec2f97ece27f6065b948c20 207 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 6 183 5.2E-67 T 22-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 SMGD1_RS08600 2f1c876f3ec2f97ece27f6065b948c20 207 Gene3D G3DSA:3.40.50.300 3 27 3.0E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS08600 2f1c876f3ec2f97ece27f6065b948c20 207 Gene3D G3DSA:3.40.50.300 87 190 3.0E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS08600 2f1c876f3ec2f97ece27f6065b948c20 207 Gene3D G3DSA:3.30.63.10 34 86 6.4E-28 T 22-04-2016 SMGD1_RS08600 2f1c876f3ec2f97ece27f6065b948c20 207 PANTHER PTHR23117:SF13 8 190 5.0E-74 T 22-04-2016 SMGD1_RS14235 bc9deb3022a077244965ea3ecc299c01 316 Pfam PF00990 Diguanylate cyclase, GGDEF domain 155 304 1.2E-21 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS14235 bc9deb3022a077244965ea3ecc299c01 316 SMART SM00448 16 129 1.4E-33 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS14235 bc9deb3022a077244965ea3ecc299c01 316 Gene3D G3DSA:3.30.70.270 155 308 3.3E-23 T 22-04-2016 SMGD1_RS14235 bc9deb3022a077244965ea3ecc299c01 316 Pfam PF00072 Response regulator receiver domain 18 129 5.2E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS14235 bc9deb3022a077244965ea3ecc299c01 316 SMART SM00267 142 311 8.1E-16 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS14235 bc9deb3022a077244965ea3ecc299c01 316 PANTHER PTHR26402 16 131 1.1E-37 T 22-04-2016 SMGD1_RS14235 bc9deb3022a077244965ea3ecc299c01 316 Gene3D G3DSA:3.40.50.2300 13 136 1.9E-36 T 22-04-2016 SMGD1_RS14235 bc9deb3022a077244965ea3ecc299c01 316 SUPERFAMILY SSF55073 158 309 1.88E-19 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS14235 bc9deb3022a077244965ea3ecc299c01 316 SUPERFAMILY SSF52172 10 139 1.24E-34 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS14235 bc9deb3022a077244965ea3ecc299c01 316 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 154 306 1.9E-16 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS08670 b3e72a98addd0772cceadde768f0aabf 329 PANTHER PTHR13794 1 312 1.9E-70 T 22-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 SMGD1_RS08670 b3e72a98addd0772cceadde768f0aabf 329 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 13 107 2.1E-4 T 22-04-2016 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain SMGD1_RS08670 b3e72a98addd0772cceadde768f0aabf 329 Gene3D G3DSA:3.30.390.10 1 106 5.9E-23 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SMGD1_RS08670 b3e72a98addd0772cceadde768f0aabf 329 PANTHER PTHR13794:SF55 1 312 1.9E-70 T 22-04-2016 SMGD1_RS08670 b3e72a98addd0772cceadde768f0aabf 329 SUPERFAMILY SSF54826 1 106 7.24E-14 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SMGD1_RS08670 b3e72a98addd0772cceadde768f0aabf 329 SUPERFAMILY SSF51604 122 312 9.17E-46 T 22-04-2016 IPR029065 Enolase C-terminal domain-like SMGD1_RS08670 b3e72a98addd0772cceadde768f0aabf 329 Pfam PF13378 Enolase C-terminal domain-like 131 299 1.9E-34 T 22-04-2016 IPR029065 Enolase C-terminal domain-like SMGD1_RS08670 b3e72a98addd0772cceadde768f0aabf 329 SMART SM00922 128 221 6.0E-10 T 22-04-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal SMGD1_RS08670 b3e72a98addd0772cceadde768f0aabf 329 Gene3D G3DSA:3.20.20.120 117 326 1.3E-57 T 22-04-2016 IPR029065 Enolase C-terminal domain-like SMGD1_RS02565 0062922ad2d1a5feac3dc7c9e12c6202 435 Gene3D G3DSA:3.90.1150.10 318 409 3.4E-21 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SMGD1_RS02565 0062922ad2d1a5feac3dc7c9e12c6202 435 Gene3D G3DSA:3.90.1150.10 3 72 3.4E-21 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SMGD1_RS02565 0062922ad2d1a5feac3dc7c9e12c6202 435 PANTHER PTHR11986 3 416 3.7E-77 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SMGD1_RS02565 0062922ad2d1a5feac3dc7c9e12c6202 435 PANTHER PTHR11986:SF5 3 416 3.7E-77 T 22-04-2016 SMGD1_RS02565 0062922ad2d1a5feac3dc7c9e12c6202 435 Pfam PF00202 Aminotransferase class-III 37 379 4.0E-42 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SMGD1_RS02565 0062922ad2d1a5feac3dc7c9e12c6202 435 SUPERFAMILY SSF53383 28 408 5.43E-78 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SMGD1_RS02565 0062922ad2d1a5feac3dc7c9e12c6202 435 Gene3D G3DSA:3.40.640.10 73 315 2.2E-49 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SMGD1_RS05675 18f963929f6da2fb16bd74423c5882ed 602 SUPERFAMILY SSF47384 374 445 2.35E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS05675 18f963929f6da2fb16bd74423c5882ed 602 SUPERFAMILY SSF55874 450 599 9.43E-26 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS05675 18f963929f6da2fb16bd74423c5882ed 602 SMART SM00387 489 602 9.6E-11 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS05675 18f963929f6da2fb16bd74423c5882ed 602 Gene3D G3DSA:3.30.565.10 454 600 1.6E-26 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS05675 18f963929f6da2fb16bd74423c5882ed 602 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 491 599 6.5E-13 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS05675 18f963929f6da2fb16bd74423c5882ed 602 SUPERFAMILY SSF103190 37 205 1.88E-38 T 22-04-2016 IPR029151 Periplasmic sensor domain-like SMGD1_RS05675 18f963929f6da2fb16bd74423c5882ed 602 PANTHER PTHR24423 375 599 8.5E-30 T 22-04-2016 SMGD1_RS05675 18f963929f6da2fb16bd74423c5882ed 602 PANTHER PTHR24423 23 72 8.5E-30 T 22-04-2016 SMGD1_RS05675 18f963929f6da2fb16bd74423c5882ed 602 PANTHER PTHR24423 338 354 8.5E-30 T 22-04-2016 SMGD1_RS05675 18f963929f6da2fb16bd74423c5882ed 602 Gene3D G3DSA:3.30.450.20 77 204 3.5E-36 T 22-04-2016 SMGD1_RS05675 18f963929f6da2fb16bd74423c5882ed 602 PRINTS PR00344 Bacterial sensor protein C-terminal signature 550 560 2.9E-7 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS05675 18f963929f6da2fb16bd74423c5882ed 602 PRINTS PR00344 Bacterial sensor protein C-terminal signature 532 546 2.9E-7 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS05675 18f963929f6da2fb16bd74423c5882ed 602 PRINTS PR00344 Bacterial sensor protein C-terminal signature 587 600 2.9E-7 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS05675 18f963929f6da2fb16bd74423c5882ed 602 PRINTS PR00344 Bacterial sensor protein C-terminal signature 563 581 2.9E-7 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS05675 18f963929f6da2fb16bd74423c5882ed 602 PANTHER PTHR24423:SF445 375 599 8.5E-30 T 22-04-2016 SMGD1_RS05675 18f963929f6da2fb16bd74423c5882ed 602 PANTHER PTHR24423:SF445 23 72 8.5E-30 T 22-04-2016 SMGD1_RS05675 18f963929f6da2fb16bd74423c5882ed 602 PANTHER PTHR24423:SF445 338 354 8.5E-30 T 22-04-2016 SMGD1_RS14305 28e3068763314d5523e89705527a9ab9 269 SUPERFAMILY SSF47240 153 269 1.42E-8 T 22-04-2016 IPR009078 Ferritin-like superfamily SMGD1_RS14305 28e3068763314d5523e89705527a9ab9 269 Gene3D G3DSA:1.20.1260.10 154 269 1.3E-7 T 22-04-2016 IPR012347 Ferritin-related SMGD1_RS11395 6c76b6c059f2299b19e2609f2e10f148 295 PRINTS PR00126 ATP synthase gamma subunit signature 241 260 1.1E-31 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SMGD1_RS11395 6c76b6c059f2299b19e2609f2e10f148 295 PRINTS PR00126 ATP synthase gamma subunit signature 79 98 1.1E-31 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SMGD1_RS11395 6c76b6c059f2299b19e2609f2e10f148 295 PRINTS PR00126 ATP synthase gamma subunit signature 272 293 1.1E-31 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SMGD1_RS11395 6c76b6c059f2299b19e2609f2e10f148 295 PRINTS PR00126 ATP synthase gamma subunit signature 172 189 1.1E-31 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SMGD1_RS11395 6c76b6c059f2299b19e2609f2e10f148 295 Pfam PF00231 ATP synthase 3 293 1.9E-79 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SMGD1_RS11395 6c76b6c059f2299b19e2609f2e10f148 295 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 293 1.9E-91 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SMGD1_RS11395 6c76b6c059f2299b19e2609f2e10f148 295 PANTHER PTHR11693 1 295 3.8E-80 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SMGD1_RS11395 6c76b6c059f2299b19e2609f2e10f148 295 Gene3D G3DSA:1.10.287.80 243 289 2.8E-27 T 22-04-2016 SMGD1_RS11395 6c76b6c059f2299b19e2609f2e10f148 295 Gene3D G3DSA:1.10.287.80 19 60 4.8E-25 T 22-04-2016 SMGD1_RS11395 6c76b6c059f2299b19e2609f2e10f148 295 Gene3D G3DSA:1.10.287.80 209 242 4.8E-25 T 22-04-2016 SMGD1_RS11395 6c76b6c059f2299b19e2609f2e10f148 295 Gene3D G3DSA:3.40.1380.10 74 197 9.1E-35 T 22-04-2016 SMGD1_RS11395 6c76b6c059f2299b19e2609f2e10f148 295 SUPERFAMILY SSF52943 2 293 2.49E-80 T 22-04-2016 IPR023633 ATPase, F1 complex, gamma subunit domain SMGD1_RS11395 6c76b6c059f2299b19e2609f2e10f148 295 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 294 31.451 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SMGD1_RS12445 6f00b8e56a255e533391b2eac4751475 608 Gene3D G3DSA:3.40.50.920 233 294 4.5E-5 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 SMGD1_RS12445 6f00b8e56a255e533391b2eac4751475 608 Gene3D G3DSA:3.40.50.970 2 183 3.0E-50 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SMGD1_RS12445 6f00b8e56a255e533391b2eac4751475 608 PANTHER PTHR18968 339 601 5.4E-56 T 22-04-2016 SMGD1_RS12445 6f00b8e56a255e533391b2eac4751475 608 PANTHER PTHR18968:SF91 339 601 5.4E-56 T 22-04-2016 SMGD1_RS12445 6f00b8e56a255e533391b2eac4751475 608 Gene3D G3DSA:3.30.70.20 551 597 6.5E-10 T 22-04-2016 SMGD1_RS12445 6f00b8e56a255e533391b2eac4751475 608 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 386 524 9.5E-25 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 SMGD1_RS12445 6f00b8e56a255e533391b2eac4751475 608 SUPERFAMILY SSF52518 355 528 9.13E-32 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SMGD1_RS12445 6f00b8e56a255e533391b2eac4751475 608 SUPERFAMILY SSF52518 3 197 2.45E-51 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SMGD1_RS12445 6f00b8e56a255e533391b2eac4751475 608 Gene3D G3DSA:3.40.50.970 352 550 2.0E-24 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SMGD1_RS12445 6f00b8e56a255e533391b2eac4751475 608 PIRSF PIRSF006439 1 602 5.6E-208 T 22-04-2016 IPR017721 Indolepyruvate ferredoxin oxidoreductase, alpha subunit GO:0043805|GO:0055114 SMGD1_RS12445 6f00b8e56a255e533391b2eac4751475 608 SUPERFAMILY SSF52922 234 296 9.57E-11 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 SMGD1_RS12445 6f00b8e56a255e533391b2eac4751475 608 SUPERFAMILY SSF54862 534 598 1.14E-8 T 22-04-2016 SMGD1_RS12445 6f00b8e56a255e533391b2eac4751475 608 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 14 184 9.8E-11 T 22-04-2016 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 SMGD1_RS03085 daa4b1641268fc99190f0e38076806fd 247 PANTHER PTHR21198 2 245 1.7E-62 T 22-04-2016 SMGD1_RS03085 daa4b1641268fc99190f0e38076806fd 247 Pfam PF01177 Asp/Glu/Hydantoin racemase 3 210 6.6E-32 T 22-04-2016 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SMGD1_RS03085 daa4b1641268fc99190f0e38076806fd 247 TIGRFAM TIGR00067 glut_race: glutamate racemase 3 245 8.0E-68 T 22-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SMGD1_RS03085 daa4b1641268fc99190f0e38076806fd 247 Hamap MF_00258 Glutamate racemase [murI]. 1 247 29.892 T 22-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SMGD1_RS03085 daa4b1641268fc99190f0e38076806fd 247 Gene3D G3DSA:3.40.50.1860 1 171 6.2E-48 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SMGD1_RS03085 daa4b1641268fc99190f0e38076806fd 247 SUPERFAMILY SSF53681 110 246 8.07E-27 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SMGD1_RS03085 daa4b1641268fc99190f0e38076806fd 247 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 176 186 - T 22-04-2016 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SMGD1_RS03085 daa4b1641268fc99190f0e38076806fd 247 PANTHER PTHR21198:SF2 2 245 1.7E-62 T 22-04-2016 SMGD1_RS03085 daa4b1641268fc99190f0e38076806fd 247 SUPERFAMILY SSF53681 1 101 1.14E-31 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SMGD1_RS01920 ccd83e95e124dbc397bb893174d8ab77 466 PANTHER PTHR30404:SF0 207 464 3.9E-64 T 22-04-2016 SMGD1_RS01920 ccd83e95e124dbc397bb893174d8ab77 466 SMART SM00646 306 460 1.2E-40 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 SMGD1_RS01920 ccd83e95e124dbc397bb893174d8ab77 466 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 247 460 1.7E-49 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 SMGD1_RS01920 ccd83e95e124dbc397bb893174d8ab77 466 PANTHER PTHR30404 207 464 3.9E-64 T 22-04-2016 SMGD1_RS01920 ccd83e95e124dbc397bb893174d8ab77 466 Gene3D G3DSA:3.40.630.40 245 344 5.7E-59 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 SMGD1_RS01920 ccd83e95e124dbc397bb893174d8ab77 466 Gene3D G3DSA:3.40.630.40 388 463 5.7E-59 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 SMGD1_RS01920 ccd83e95e124dbc397bb893174d8ab77 466 SUPERFAMILY SSF53187 244 343 6.59E-52 T 22-04-2016 SMGD1_RS01920 ccd83e95e124dbc397bb893174d8ab77 466 SUPERFAMILY SSF53187 387 463 6.59E-52 T 22-04-2016 SMGD1_RS04715 39c21bc59034a6a92f1ea378ffc76a52 218 PANTHER PTHR40572 86 218 3.0E-24 T 22-04-2016 SMGD1_RS04715 39c21bc59034a6a92f1ea378ffc76a52 218 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 95 212 6.5E-17 T 22-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 SMGD1_RS02925 f61ee8e2864da11ed8b66c6cf0aebbe7 164 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 76 87 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SMGD1_RS02925 f61ee8e2864da11ed8b66c6cf0aebbe7 164 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 144 155 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SMGD1_RS02925 f61ee8e2864da11ed8b66c6cf0aebbe7 164 PANTHER PTHR24960:SF46 28 162 4.0E-12 T 22-04-2016 SMGD1_RS02925 f61ee8e2864da11ed8b66c6cf0aebbe7 164 SUPERFAMILY SSF46548 39 162 2.41E-14 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 SMGD1_RS02925 f61ee8e2864da11ed8b66c6cf0aebbe7 164 Gene3D G3DSA:3.30.70.20 85 117 1.2E-5 T 22-04-2016 SMGD1_RS02925 f61ee8e2864da11ed8b66c6cf0aebbe7 164 PANTHER PTHR24960 28 162 4.0E-12 T 22-04-2016 SMGD1_RS02925 f61ee8e2864da11ed8b66c6cf0aebbe7 164 Gene3D G3DSA:3.30.70.20 41 84 3.2E-10 T 22-04-2016 SMGD1_RS02925 f61ee8e2864da11ed8b66c6cf0aebbe7 164 Gene3D G3DSA:3.30.70.20 118 161 1.0E-6 T 22-04-2016 SMGD1_RS02645 c4a12cdd181cf533131bb6f632d21c67 355 PANTHER PTHR10233 16 343 1.4E-120 T 22-04-2016 SMGD1_RS02645 c4a12cdd181cf533131bb6f632d21c67 355 Gene3D G3DSA:1.20.120.420 6 156 8.1E-38 T 22-04-2016 IPR027363 Methylthioribose-1-phosphate isomerase-like, N-terminal domain KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|UniPathway: UPA00904 SMGD1_RS02645 c4a12cdd181cf533131bb6f632d21c67 355 Pfam PF01008 Initiation factor 2 subunit family 72 343 1.6E-58 T 22-04-2016 IPR000649 Initiation factor 2B-related GO:0044237 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|UniPathway: UPA00904 SMGD1_RS02645 c4a12cdd181cf533131bb6f632d21c67 355 TIGRFAM TIGR00512 salvage_mtnA: S-methyl-5-thioribose-1-phosphate isomerase 7 343 6.0E-124 T 22-04-2016 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|UniPathway: UPA00904 SMGD1_RS02645 c4a12cdd181cf533131bb6f632d21c67 355 Hamap MF_01678 Putative methylthioribose-1-phosphate isomerase [mtnA]. 4 353 34.081 T 22-04-2016 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|UniPathway: UPA00904 SMGD1_RS02645 c4a12cdd181cf533131bb6f632d21c67 355 Gene3D G3DSA:3.40.50.10470 157 345 2.3E-58 T 22-04-2016 SMGD1_RS02645 c4a12cdd181cf533131bb6f632d21c67 355 TIGRFAM TIGR00524 eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins 34 343 1.3E-87 T 22-04-2016 IPR011559 Initiation factor 2B alpha/beta/delta GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|UniPathway: UPA00904 SMGD1_RS02645 c4a12cdd181cf533131bb6f632d21c67 355 SUPERFAMILY SSF100950 5 345 2.3E-101 T 22-04-2016 SMGD1_RS02645 c4a12cdd181cf533131bb6f632d21c67 355 PANTHER PTHR10233:SF6 16 343 1.4E-120 T 22-04-2016 SMGD1_RS13445 14e4cbcb9ab0dbf9fc62ce17adff45e2 396 Pfam PF13941 MutL protein 15 302 2.3E-27 T 22-04-2016 IPR006230 Protein MutL SMGD1_RS02015 8f510ecc1babaea5ae0c3cb2788f3bd1 399 PANTHER PTHR11061 1 397 2.1E-147 T 22-04-2016 SMGD1_RS02015 8f510ecc1babaea5ae0c3cb2788f3bd1 399 SUPERFAMILY SSF53335 81 394 3.25E-64 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS02015 8f510ecc1babaea5ae0c3cb2788f3bd1 399 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 105 349 7.2E-32 T 22-04-2016 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 SMGD1_RS02015 8f510ecc1babaea5ae0c3cb2788f3bd1 399 PANTHER PTHR11061:SF15 1 397 2.1E-147 T 22-04-2016 SMGD1_RS02015 8f510ecc1babaea5ae0c3cb2788f3bd1 399 Gene3D G3DSA:2.30.130.10 9 73 2.5E-5 T 22-04-2016 IPR015947 PUA-like domain SMGD1_RS02015 8f510ecc1babaea5ae0c3cb2788f3bd1 399 Gene3D G3DSA:3.40.50.150 184 394 9.8E-49 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS02015 8f510ecc1babaea5ae0c3cb2788f3bd1 399 Gene3D G3DSA:3.30.750.80 75 178 1.8E-24 T 22-04-2016 SMGD1_RS02015 8f510ecc1babaea5ae0c3cb2788f3bd1 399 SUPERFAMILY SSF88697 7 73 3.81E-17 T 22-04-2016 IPR015947 PUA-like domain SMGD1_RS11000 d0fcdcedd5ffad96ccef22a008a1c177 365 PANTHER PTHR30034 1 344 1.3E-96 T 22-04-2016 SMGD1_RS11000 d0fcdcedd5ffad96ccef22a008a1c177 365 PRINTS PR00955 Flagellar motor switch protein FliM signature 92 108 1.2E-30 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 SMGD1_RS11000 d0fcdcedd5ffad96ccef22a008a1c177 365 PRINTS PR00955 Flagellar motor switch protein FliM signature 2 15 1.2E-30 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 SMGD1_RS11000 d0fcdcedd5ffad96ccef22a008a1c177 365 PRINTS PR00955 Flagellar motor switch protein FliM signature 117 136 1.2E-30 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 SMGD1_RS11000 d0fcdcedd5ffad96ccef22a008a1c177 365 PRINTS PR00955 Flagellar motor switch protein FliM signature 213 231 1.2E-30 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 SMGD1_RS11000 d0fcdcedd5ffad96ccef22a008a1c177 365 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 256 325 1.3E-16 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) SMGD1_RS11000 d0fcdcedd5ffad96ccef22a008a1c177 365 SUPERFAMILY SSF101801 255 329 1.06E-14 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) SMGD1_RS11000 d0fcdcedd5ffad96ccef22a008a1c177 365 PANTHER PTHR30034:SF0 1 344 1.3E-96 T 22-04-2016 SMGD1_RS11000 d0fcdcedd5ffad96ccef22a008a1c177 365 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 3 324 3.5E-109 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 SMGD1_RS11000 d0fcdcedd5ffad96ccef22a008a1c177 365 Gene3D G3DSA:3.40.1550.10 48 211 2.7E-6 T 22-04-2016 IPR028976 CheC-like domain SMGD1_RS11000 d0fcdcedd5ffad96ccef22a008a1c177 365 SUPERFAMILY SSF103039 47 231 6.8E-28 T 22-04-2016 IPR028976 CheC-like domain SMGD1_RS11000 d0fcdcedd5ffad96ccef22a008a1c177 365 Pfam PF02154 Flagellar motor switch protein FliM 41 231 1.8E-76 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 SMGD1_RS11000 d0fcdcedd5ffad96ccef22a008a1c177 365 Gene3D G3DSA:2.30.330.10 243 328 4.0E-13 T 22-04-2016 SMGD1_RS11000 d0fcdcedd5ffad96ccef22a008a1c177 365 PIRSF PIRSF002888 1 334 2.3E-117 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 SMGD1_RS02675 ef7492037e2e460b24501d03c8e357ab 604 Pfam PF13522 Glutamine amidotransferase domain 60 193 2.8E-19 T 22-04-2016 SMGD1_RS02675 ef7492037e2e460b24501d03c8e357ab 604 Gene3D G3DSA:3.60.20.10 2 235 5.7E-68 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SMGD1_RS02675 ef7492037e2e460b24501d03c8e357ab 604 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 604 1.6E-232 T 22-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 SMGD1_RS02675 ef7492037e2e460b24501d03c8e357ab 604 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 604 36.254 T 22-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 SMGD1_RS02675 ef7492037e2e460b24501d03c8e357ab 604 PANTHER PTHR10937 1 604 7.1E-245 T 22-04-2016 SMGD1_RS02675 ef7492037e2e460b24501d03c8e357ab 604 Pfam PF01380 SIS domain 467 554 7.5E-10 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 SMGD1_RS02675 ef7492037e2e460b24501d03c8e357ab 604 Pfam PF01380 SIS domain 292 414 2.2E-28 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 SMGD1_RS02675 ef7492037e2e460b24501d03c8e357ab 604 Gene3D G3DSA:3.40.50.10490 245 440 1.4E-66 T 22-04-2016 SMGD1_RS02675 ef7492037e2e460b24501d03c8e357ab 604 Gene3D G3DSA:3.40.50.10490 441 604 1.7E-45 T 22-04-2016 SMGD1_RS02675 ef7492037e2e460b24501d03c8e357ab 604 PANTHER PTHR10937:SF0 1 604 7.1E-245 T 22-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 SMGD1_RS02675 ef7492037e2e460b24501d03c8e357ab 604 SUPERFAMILY SSF53697 246 604 3.43E-90 T 22-04-2016 SMGD1_RS02675 ef7492037e2e460b24501d03c8e357ab 604 SUPERFAMILY SSF56235 2 232 1.2E-61 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SMGD1_RS10140 cb0eec6464ed9d43882572173cf430ce 374 PANTHER PTHR30408 169 374 1.0E-15 T 22-04-2016 SMGD1_RS10140 cb0eec6464ed9d43882572173cf430ce 374 PANTHER PTHR30408:SF2 169 374 1.0E-15 T 22-04-2016 SMGD1_RS10140 cb0eec6464ed9d43882572173cf430ce 374 SUPERFAMILY SSF116734 181 374 2.29E-34 T 22-04-2016 SMGD1_RS10140 cb0eec6464ed9d43882572173cf430ce 374 Pfam PF01420 Type I restriction modification DNA specificity domain 181 349 8.0E-16 T 22-04-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 SMGD1_RS10140 cb0eec6464ed9d43882572173cf430ce 374 Pfam PF01420 Type I restriction modification DNA specificity domain 3 156 7.7E-23 T 22-04-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 SMGD1_RS10140 cb0eec6464ed9d43882572173cf430ce 374 SUPERFAMILY SSF116734 2 178 1.26E-39 T 22-04-2016 SMGD1_RS00720 7cec59a02b2d5f6f6f63b490021f97dd 449 Gene3D G3DSA:3.40.630.30 3 125 6.4E-19 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMGD1_RS00720 7cec59a02b2d5f6f6f63b490021f97dd 449 Gene3D G3DSA:3.20.20.70 175 449 2.3E-88 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMGD1_RS00720 7cec59a02b2d5f6f6f63b490021f97dd 449 Pfam PF13508 Acetyltransferase (GNAT) domain 40 116 9.0E-8 T 22-04-2016 IPR000182 GNAT domain GO:0008080 SMGD1_RS00720 7cec59a02b2d5f6f6f63b490021f97dd 449 PANTHER PTHR37418:SF2 175 449 5.1E-78 T 22-04-2016 SMGD1_RS00720 7cec59a02b2d5f6f6f63b490021f97dd 449 Pfam PF05853 beta-keto acid cleavage enzyme 177 449 1.5E-80 T 22-04-2016 IPR008567 3-keto-5-aminohexanoate cleavage enzyme GO:0016740|GO:0019475 KEGG: 00600+2.3.1.24|UniPathway: UPA00870 SMGD1_RS00720 7cec59a02b2d5f6f6f63b490021f97dd 449 SUPERFAMILY SSF55729 3 127 1.51E-15 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMGD1_RS00720 7cec59a02b2d5f6f6f63b490021f97dd 449 PANTHER PTHR37418 175 449 5.1E-78 T 22-04-2016 SMGD1_RS11190 ca9d2c7f0a4f637d5f172a05c4b6868c 409 Gene3D G3DSA:1.10.287.130 204 263 3.0E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS11190 ca9d2c7f0a4f637d5f172a05c4b6868c 409 SUPERFAMILY SSF47384 196 263 6.08E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS11190 ca9d2c7f0a4f637d5f172a05c4b6868c 409 SUPERFAMILY SSF55874 278 403 6.02E-12 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS11190 ca9d2c7f0a4f637d5f172a05c4b6868c 409 PANTHER PTHR24423 154 390 7.1E-14 T 22-04-2016 SMGD1_RS11190 ca9d2c7f0a4f637d5f172a05c4b6868c 409 PANTHER PTHR24423 44 59 7.1E-14 T 22-04-2016 SMGD1_RS11190 ca9d2c7f0a4f637d5f172a05c4b6868c 409 PANTHER PTHR24423:SF354 154 390 7.1E-14 T 22-04-2016 SMGD1_RS11190 ca9d2c7f0a4f637d5f172a05c4b6868c 409 PANTHER PTHR24423:SF354 44 59 7.1E-14 T 22-04-2016 SMGD1_RS11190 ca9d2c7f0a4f637d5f172a05c4b6868c 409 Pfam PF00672 HAMP domain 141 208 4.6E-7 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SMGD1_RS11190 ca9d2c7f0a4f637d5f172a05c4b6868c 409 Gene3D G3DSA:3.30.565.10 275 402 1.2E-8 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS12065 adea6309aafbc15ab4a098702c893cf6 404 SUPERFAMILY SSF55874 276 401 6.94E-12 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS12065 adea6309aafbc15ab4a098702c893cf6 404 PANTHER PTHR24423 149 404 2.0E-15 T 22-04-2016 SMGD1_RS12065 adea6309aafbc15ab4a098702c893cf6 404 PANTHER PTHR24423 69 129 2.0E-15 T 22-04-2016 SMGD1_RS12065 adea6309aafbc15ab4a098702c893cf6 404 Gene3D G3DSA:3.30.565.10 304 404 6.3E-9 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS12065 adea6309aafbc15ab4a098702c893cf6 404 Pfam PF00672 HAMP domain 138 203 1.1E-6 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SMGD1_RS12065 adea6309aafbc15ab4a098702c893cf6 404 SUPERFAMILY SSF47384 193 262 4.12E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS12065 adea6309aafbc15ab4a098702c893cf6 404 PANTHER PTHR24423:SF477 149 404 2.0E-15 T 22-04-2016 SMGD1_RS12065 adea6309aafbc15ab4a098702c893cf6 404 PANTHER PTHR24423:SF477 69 129 2.0E-15 T 22-04-2016 SMGD1_RS12065 adea6309aafbc15ab4a098702c893cf6 404 Gene3D G3DSA:1.10.287.130 199 254 2.5E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS04130 24de2176dbdd9fc660cafb4b7345717d 250 PANTHER PTHR24078:SF261 132 245 1.8E-12 T 22-04-2016 SMGD1_RS04130 24de2176dbdd9fc660cafb4b7345717d 250 Pfam PF05099 Tellurite resistance protein TerB 51 167 7.2E-13 T 22-04-2016 IPR007791 Co-chaperone DjlA, N-terminal SMGD1_RS04130 24de2176dbdd9fc660cafb4b7345717d 250 PRINTS PR00625 DnaJ domain signature 230 250 1.9E-11 T 22-04-2016 IPR001623 DnaJ domain SMGD1_RS04130 24de2176dbdd9fc660cafb4b7345717d 250 PRINTS PR00625 DnaJ domain signature 206 221 1.9E-11 T 22-04-2016 IPR001623 DnaJ domain SMGD1_RS04130 24de2176dbdd9fc660cafb4b7345717d 250 PRINTS PR00625 DnaJ domain signature 188 206 1.9E-11 T 22-04-2016 IPR001623 DnaJ domain SMGD1_RS04130 24de2176dbdd9fc660cafb4b7345717d 250 SUPERFAMILY SSF46565 128 248 2.09E-20 T 22-04-2016 IPR001623 DnaJ domain SMGD1_RS04130 24de2176dbdd9fc660cafb4b7345717d 250 Gene3D G3DSA:1.10.287.110 191 248 3.6E-15 T 22-04-2016 IPR001623 DnaJ domain SMGD1_RS04130 24de2176dbdd9fc660cafb4b7345717d 250 Gene3D G3DSA:1.10.3680.10 30 190 2.0E-21 T 22-04-2016 IPR029024 TerB-like SMGD1_RS04130 24de2176dbdd9fc660cafb4b7345717d 250 Pfam PF00226 DnaJ domain 186 249 2.2E-13 T 22-04-2016 IPR001623 DnaJ domain SMGD1_RS04130 24de2176dbdd9fc660cafb4b7345717d 250 SMART SM00271 185 250 2.2E-16 T 22-04-2016 IPR001623 DnaJ domain SMGD1_RS04130 24de2176dbdd9fc660cafb4b7345717d 250 PANTHER PTHR24078 132 245 1.8E-12 T 22-04-2016 SMGD1_RS00110 121d2d066bcb66443b8a4bad7709194b 567 SMART SM00388 335 405 4.3E-4 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS00110 121d2d066bcb66443b8a4bad7709194b 567 Gene3D G3DSA:3.30.450.20 191 318 6.4E-17 T 22-04-2016 SMGD1_RS00110 121d2d066bcb66443b8a4bad7709194b 567 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 449 564 2.6E-15 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS00110 121d2d066bcb66443b8a4bad7709194b 567 SMART SM00091 202 270 1.3E-4 T 22-04-2016 IPR000014 PAS domain SMGD1_RS00110 121d2d066bcb66443b8a4bad7709194b 567 Pfam PF00512 His Kinase A (phospho-acceptor) domain 336 403 3.8E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS00110 121d2d066bcb66443b8a4bad7709194b 567 Gene3D G3DSA:1.10.287.130 334 390 5.5E-5 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS00110 121d2d066bcb66443b8a4bad7709194b 567 SMART SM00387 446 566 7.2E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS00110 121d2d066bcb66443b8a4bad7709194b 567 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 201 322 3.9E-13 T 22-04-2016 IPR000014 PAS domain SMGD1_RS00110 121d2d066bcb66443b8a4bad7709194b 567 Gene3D G3DSA:3.30.565.10 391 563 1.0E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS00110 121d2d066bcb66443b8a4bad7709194b 567 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 37 87 6.1E-8 T 22-04-2016 IPR029095 NarX-like, N-terminal SMGD1_RS00110 121d2d066bcb66443b8a4bad7709194b 567 SUPERFAMILY SSF55785 214 322 1.15E-15 T 22-04-2016 IPR000014 PAS domain SMGD1_RS00110 121d2d066bcb66443b8a4bad7709194b 567 Pfam PF13426 PAS domain 214 318 7.5E-9 T 22-04-2016 IPR000014 PAS domain SMGD1_RS00110 121d2d066bcb66443b8a4bad7709194b 567 PRINTS PR00344 Bacterial sensor protein C-terminal signature 487 501 3.9E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS00110 121d2d066bcb66443b8a4bad7709194b 567 PRINTS PR00344 Bacterial sensor protein C-terminal signature 505 515 3.9E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS00110 121d2d066bcb66443b8a4bad7709194b 567 PRINTS PR00344 Bacterial sensor protein C-terminal signature 518 536 3.9E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS00110 121d2d066bcb66443b8a4bad7709194b 567 SUPERFAMILY SSF47384 330 403 8.44E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS00110 121d2d066bcb66443b8a4bad7709194b 567 PANTHER PTHR24423 200 545 1.2E-42 T 22-04-2016 SMGD1_RS00110 121d2d066bcb66443b8a4bad7709194b 567 PANTHER PTHR24423 2 13 1.2E-42 T 22-04-2016 SMGD1_RS00110 121d2d066bcb66443b8a4bad7709194b 567 PANTHER PTHR24423 98 117 1.2E-42 T 22-04-2016 SMGD1_RS00110 121d2d066bcb66443b8a4bad7709194b 567 SUPERFAMILY SSF55874 396 545 7.07E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS06745 1bf18dfdbca84cda674c71b86f81c18c 635 Gene3D G3DSA:2.40.170.20 155 634 9.5E-59 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMGD1_RS06745 1bf18dfdbca84cda674c71b86f81c18c 635 SUPERFAMILY SSF56935 24 635 5.33E-82 T 22-04-2016 SMGD1_RS06745 1bf18dfdbca84cda674c71b86f81c18c 635 Pfam PF07715 TonB-dependent Receptor Plug Domain 43 152 5.1E-15 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMGD1_RS06745 1bf18dfdbca84cda674c71b86f81c18c 635 PANTHER PTHR32552:SF0 6 635 3.7E-45 T 22-04-2016 SMGD1_RS06745 1bf18dfdbca84cda674c71b86f81c18c 635 Gene3D G3DSA:2.170.130.10 21 154 5.4E-23 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMGD1_RS06745 1bf18dfdbca84cda674c71b86f81c18c 635 PANTHER PTHR32552 6 635 3.7E-45 T 22-04-2016 SMGD1_RS03875 804828148424b076b41da0362d9b4b07 197 Gene3D G3DSA:1.25.40.10 49 190 2.0E-32 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS03875 804828148424b076b41da0362d9b4b07 197 SUPERFAMILY SSF48452 49 190 1.23E-29 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS03875 804828148424b076b41da0362d9b4b07 197 Pfam PF13181 Tetratricopeptide repeat 87 119 1.6E-7 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMGD1_RS03875 804828148424b076b41da0362d9b4b07 197 Pfam PF13424 Tetratricopeptide repeat 123 184 7.4E-8 T 22-04-2016 SMGD1_RS03875 804828148424b076b41da0362d9b4b07 197 PANTHER PTHR23083 44 190 9.1E-29 T 22-04-2016 SMGD1_RS03875 804828148424b076b41da0362d9b4b07 197 SMART SM00028 154 187 1.3E-6 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMGD1_RS03875 804828148424b076b41da0362d9b4b07 197 SMART SM00028 120 153 11.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMGD1_RS03875 804828148424b076b41da0362d9b4b07 197 SMART SM00028 52 85 73.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMGD1_RS03875 804828148424b076b41da0362d9b4b07 197 SMART SM00028 86 119 1.4E-5 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMGD1_RS06470 dc495f76f215fbd65fe6e585a4131000 310 PANTHER PTHR10996 1 306 2.1E-77 T 22-04-2016 SMGD1_RS06470 dc495f76f215fbd65fe6e585a4131000 310 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 109 288 6.8E-47 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 SMGD1_RS06470 dc495f76f215fbd65fe6e585a4131000 310 Gene3D G3DSA:3.40.50.720 5 105 9.6E-27 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS06470 dc495f76f215fbd65fe6e585a4131000 310 SUPERFAMILY SSF52283 5 128 2.34E-30 T 22-04-2016 SMGD1_RS06470 dc495f76f215fbd65fe6e585a4131000 310 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 196 218 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site SMGD1_RS06470 dc495f76f215fbd65fe6e585a4131000 310 Gene3D G3DSA:3.40.50.720 106 290 1.9E-48 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS06470 dc495f76f215fbd65fe6e585a4131000 310 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 10 308 3.5E-24 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 SMGD1_RS06470 dc495f76f215fbd65fe6e585a4131000 310 SUPERFAMILY SSF51735 102 289 6.48E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS06470 dc495f76f215fbd65fe6e585a4131000 310 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 225 241 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site SMGD1_RS08295 bca7144582324a3fcb3131c38b466eff 245 PANTHER PTHR30632:SF0 17 242 3.6E-33 T 22-04-2016 SMGD1_RS08295 bca7144582324a3fcb3131c38b466eff 245 Gene3D G3DSA:3.40.190.10 132 241 1.1E-4 T 22-04-2016 SMGD1_RS08295 bca7144582324a3fcb3131c38b466eff 245 SUPERFAMILY SSF53850 19 245 4.94E-49 T 22-04-2016 SMGD1_RS08295 bca7144582324a3fcb3131c38b466eff 245 PIRSF PIRSF004846 4 245 1.2E-52 T 22-04-2016 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 SMGD1_RS08295 bca7144582324a3fcb3131c38b466eff 245 Gene3D G3DSA:3.40.190.10 19 131 2.5E-33 T 22-04-2016 SMGD1_RS08295 bca7144582324a3fcb3131c38b466eff 245 PANTHER PTHR30632 17 242 3.6E-33 T 22-04-2016 SMGD1_RS08295 bca7144582324a3fcb3131c38b466eff 245 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 25 241 4.4E-53 T 22-04-2016 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 SMGD1_RS08295 bca7144582324a3fcb3131c38b466eff 245 Pfam PF13531 Bacterial extracellular solute-binding protein 20 242 3.2E-38 T 22-04-2016 SMGD1_RS07095 c39ef1dea9f7509774cb6148cda776b7 129 Pfam PF13899 Thioredoxin-like 21 102 3.4E-9 T 22-04-2016 SMGD1_RS07095 c39ef1dea9f7509774cb6148cda776b7 129 Gene3D G3DSA:3.40.30.10 18 127 1.3E-5 T 22-04-2016 IPR012336 Thioredoxin-like fold SMGD1_RS07095 c39ef1dea9f7509774cb6148cda776b7 129 SUPERFAMILY SSF52833 13 127 2.24E-11 T 22-04-2016 IPR012336 Thioredoxin-like fold SMGD1_RS09615 33ec06ef55b682af835fccaa2ad75fcc 124 PANTHER PTHR30204:SF8 2 91 6.3E-30 T 22-04-2016 SMGD1_RS09615 33ec06ef55b682af835fccaa2ad75fcc 124 ProSitePatterns PS00552 MerR-type HTH domain signature. 13 35 - T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SMGD1_RS09615 33ec06ef55b682af835fccaa2ad75fcc 124 Gene3D G3DSA:1.10.1660.10 10 100 3.8E-20 T 22-04-2016 SMGD1_RS09615 33ec06ef55b682af835fccaa2ad75fcc 124 SUPERFAMILY SSF46955 10 101 2.79E-18 T 22-04-2016 IPR009061 Putative DNA-binding domain SMGD1_RS09615 33ec06ef55b682af835fccaa2ad75fcc 124 PANTHER PTHR30204 2 91 6.3E-30 T 22-04-2016 SMGD1_RS09615 33ec06ef55b682af835fccaa2ad75fcc 124 Pfam PF13411 MerR HTH family regulatory protein 10 77 1.0E-15 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SMGD1_RS09615 33ec06ef55b682af835fccaa2ad75fcc 124 SMART SM00422 10 79 1.7E-23 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SMGD1_RS10815 07374c5209cca30794a2d2922550810c 615 SMART SM00028 414 447 0.12 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMGD1_RS10815 07374c5209cca30794a2d2922550810c 615 SMART SM00028 379 411 0.77 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMGD1_RS10815 07374c5209cca30794a2d2922550810c 615 Pfam PF07719 Tetratricopeptide repeat 380 405 3.8E-5 T 22-04-2016 IPR013105 Tetratricopeptide repeat 2 SMGD1_RS10815 07374c5209cca30794a2d2922550810c 615 PANTHER PTHR22550 1 311 7.1E-23 T 22-04-2016 SMGD1_RS10815 07374c5209cca30794a2d2922550810c 615 Pfam PF13181 Tetratricopeptide repeat 419 446 0.032 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMGD1_RS10815 07374c5209cca30794a2d2922550810c 615 PANTHER PTHR22550:SF8 1 311 7.1E-23 T 22-04-2016 SMGD1_RS10815 07374c5209cca30794a2d2922550810c 615 Gene3D G3DSA:3.40.50.410 83 220 4.3E-5 T 22-04-2016 IPR002035 von Willebrand factor, type A SMGD1_RS10815 07374c5209cca30794a2d2922550810c 615 SMART SM00327 85 253 3.1E-13 T 22-04-2016 IPR002035 von Willebrand factor, type A SMGD1_RS10815 07374c5209cca30794a2d2922550810c 615 Pfam PF13519 von Willebrand factor type A domain 88 193 8.1E-13 T 22-04-2016 IPR002035 von Willebrand factor, type A SMGD1_RS10815 07374c5209cca30794a2d2922550810c 615 SUPERFAMILY SSF48452 353 466 8.85E-12 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS10815 07374c5209cca30794a2d2922550810c 615 Gene3D G3DSA:1.25.40.10 354 465 6.8E-14 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS10815 07374c5209cca30794a2d2922550810c 615 SUPERFAMILY SSF53300 82 220 3.71E-19 T 22-04-2016 IPR002035 von Willebrand factor, type A SMGD1_RS09585 92edd9a277c7ff71147d35aa56de9d13 173 Gene3D G3DSA:3.40.250.10 58 167 9.0E-16 T 22-04-2016 IPR001763 Rhodanese-like domain SMGD1_RS09585 92edd9a277c7ff71147d35aa56de9d13 173 SUPERFAMILY SSF52821 59 168 4.45E-16 T 22-04-2016 IPR001763 Rhodanese-like domain SMGD1_RS09585 92edd9a277c7ff71147d35aa56de9d13 173 Pfam PF00581 Rhodanese-like domain 80 161 1.6E-10 T 22-04-2016 IPR001763 Rhodanese-like domain SMGD1_RS09585 92edd9a277c7ff71147d35aa56de9d13 173 SMART SM00450 64 165 6.4E-9 T 22-04-2016 IPR001763 Rhodanese-like domain SMGD1_RS05705 f9c2e523596e61f68771f923702a2368 453 Pfam PF00270 DEAD/DEAH box helicase 25 190 1.3E-46 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SMGD1_RS05705 f9c2e523596e61f68771f923702a2368 453 Pfam PF00271 Helicase conserved C-terminal domain 226 334 1.4E-28 T 22-04-2016 IPR001650 Helicase, C-terminal SMGD1_RS05705 f9c2e523596e61f68771f923702a2368 453 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 149 157 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site SMGD1_RS05705 f9c2e523596e61f68771f923702a2368 453 SMART SM00490 253 334 1.3E-27 T 22-04-2016 IPR001650 Helicase, C-terminal SMGD1_RS05705 f9c2e523596e61f68771f923702a2368 453 SUPERFAMILY SSF52540 70 351 7.89E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS05705 f9c2e523596e61f68771f923702a2368 453 Gene3D G3DSA:3.40.50.300 209 356 4.5E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS05705 f9c2e523596e61f68771f923702a2368 453 SMART SM00487 20 217 5.3E-56 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SMGD1_RS05705 f9c2e523596e61f68771f923702a2368 453 PANTHER PTHR24031 3 433 4.9E-207 T 22-04-2016 SMGD1_RS05705 f9c2e523596e61f68771f923702a2368 453 PANTHER PTHR24031:SF180 3 433 4.9E-207 T 22-04-2016 SMGD1_RS05705 f9c2e523596e61f68771f923702a2368 453 Gene3D G3DSA:3.40.50.300 2 205 3.1E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS05705 f9c2e523596e61f68771f923702a2368 453 Pfam PF03880 DbpA RNA binding domain 381 450 8.4E-23 T 22-04-2016 IPR005580 DbpA, RNA-binding domain SMGD1_RS02225 f6ba6103d57b6aa1d743a23763635d8a 414 Pfam PF06689 ClpX C4-type zinc finger 5 39 1.6E-13 T 22-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 SMGD1_RS02225 f6ba6103d57b6aa1d743a23763635d8a 414 SUPERFAMILY SSF52540 58 397 3.13E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS02225 f6ba6103d57b6aa1d743a23763635d8a 414 SUPERFAMILY SSF57716 4 39 2.42E-8 T 22-04-2016 SMGD1_RS02225 f6ba6103d57b6aa1d743a23763635d8a 414 SMART SM01086 312 405 2.3E-31 T 22-04-2016 IPR019489 Clp ATPase, C-terminal SMGD1_RS02225 f6ba6103d57b6aa1d743a23763635d8a 414 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 4 404 4.1E-182 T 22-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 SMGD1_RS02225 f6ba6103d57b6aa1d743a23763635d8a 414 PANTHER PTHR11262:SF4 5 411 3.2E-211 T 22-04-2016 SMGD1_RS02225 f6ba6103d57b6aa1d743a23763635d8a 414 Gene3D G3DSA:3.40.50.300 289 306 3.8E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS02225 f6ba6103d57b6aa1d743a23763635d8a 414 Gene3D G3DSA:3.40.50.300 62 252 3.8E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS02225 f6ba6103d57b6aa1d743a23763635d8a 414 SMART SM00382 110 263 2.6E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain SMGD1_RS02225 f6ba6103d57b6aa1d743a23763635d8a 414 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 313 382 1.7E-15 T 22-04-2016 IPR019489 Clp ATPase, C-terminal SMGD1_RS02225 f6ba6103d57b6aa1d743a23763635d8a 414 PANTHER PTHR11262 5 411 3.2E-211 T 22-04-2016 SMGD1_RS02225 f6ba6103d57b6aa1d743a23763635d8a 414 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 409 47.99 T 22-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 SMGD1_RS02225 f6ba6103d57b6aa1d743a23763635d8a 414 SMART SM00994 3 42 1.2E-15 T 22-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 SMGD1_RS02225 f6ba6103d57b6aa1d743a23763635d8a 414 Pfam PF07724 AAA domain (Cdc48 subfamily) 111 306 3.9E-48 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SMGD1_RS02225 f6ba6103d57b6aa1d743a23763635d8a 414 Gene3D G3DSA:1.10.8.60 312 412 7.1E-37 T 22-04-2016 SMGD1_RS00265 fa8e5d837837ef6ac4baf8adabf55366 306 SUPERFAMILY SSF103247 39 150 3.4E-9 T 22-04-2016 IPR005180 Domain of unknown function DUF302 SMGD1_RS00265 fa8e5d837837ef6ac4baf8adabf55366 306 SUPERFAMILY SSF103247 185 304 3.92E-16 T 22-04-2016 IPR005180 Domain of unknown function DUF302 SMGD1_RS00265 fa8e5d837837ef6ac4baf8adabf55366 306 Gene3D G3DSA:3.30.310.70 39 151 8.3E-8 T 22-04-2016 IPR005180 Domain of unknown function DUF302 SMGD1_RS00265 fa8e5d837837ef6ac4baf8adabf55366 306 Pfam PF03625 Domain of unknown function DUF302 207 269 1.8E-7 T 22-04-2016 IPR005180 Domain of unknown function DUF302 SMGD1_RS00265 fa8e5d837837ef6ac4baf8adabf55366 306 Gene3D G3DSA:3.30.310.70 191 304 2.1E-13 T 22-04-2016 IPR005180 Domain of unknown function DUF302 SMGD1_RS04830 305f7b6e59786f4a713e7666d90b98f2 293 SUPERFAMILY SSF52821 159 289 3.14E-14 T 22-04-2016 IPR001763 Rhodanese-like domain SMGD1_RS04830 305f7b6e59786f4a713e7666d90b98f2 293 SMART SM00450 21 140 4.2E-12 T 22-04-2016 IPR001763 Rhodanese-like domain SMGD1_RS04830 305f7b6e59786f4a713e7666d90b98f2 293 SMART SM00450 163 285 15.0 T 22-04-2016 IPR001763 Rhodanese-like domain SMGD1_RS04830 305f7b6e59786f4a713e7666d90b98f2 293 Pfam PF00581 Rhodanese-like domain 22 134 5.9E-15 T 22-04-2016 IPR001763 Rhodanese-like domain SMGD1_RS04830 305f7b6e59786f4a713e7666d90b98f2 293 Pfam PF00581 Rhodanese-like domain 168 281 2.8E-5 T 22-04-2016 IPR001763 Rhodanese-like domain SMGD1_RS04830 305f7b6e59786f4a713e7666d90b98f2 293 PANTHER PTHR11364 2 289 6.7E-41 T 22-04-2016 SMGD1_RS04830 305f7b6e59786f4a713e7666d90b98f2 293 Gene3D G3DSA:3.40.250.10 159 289 1.9E-15 T 22-04-2016 IPR001763 Rhodanese-like domain SMGD1_RS04830 305f7b6e59786f4a713e7666d90b98f2 293 PANTHER PTHR11364:SF0 2 289 6.7E-41 T 22-04-2016 SMGD1_RS04830 305f7b6e59786f4a713e7666d90b98f2 293 Gene3D G3DSA:3.40.250.10 18 137 1.1E-23 T 22-04-2016 IPR001763 Rhodanese-like domain SMGD1_RS04830 305f7b6e59786f4a713e7666d90b98f2 293 SUPERFAMILY SSF52821 19 137 3.93E-24 T 22-04-2016 IPR001763 Rhodanese-like domain SMGD1_RS00905 fcde346105417d5fa2316c07c46cd9e3 208 Gene3D G3DSA:3.40.50.1820 14 206 4.2E-35 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SMGD1_RS00905 fcde346105417d5fa2316c07c46cd9e3 208 Pfam PF02230 Phospholipase/Carboxylesterase 13 204 7.5E-22 T 22-04-2016 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 SMGD1_RS00905 fcde346105417d5fa2316c07c46cd9e3 208 SUPERFAMILY SSF53474 9 206 1.9E-35 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SMGD1_RS00905 fcde346105417d5fa2316c07c46cd9e3 208 PANTHER PTHR10655 9 207 1.3E-26 T 22-04-2016 SMGD1_RS08685 0de24f8aaf4ced1aea3d15edaa400cdc 662 Gene3D G3DSA:2.40.170.20 162 662 1.0E-79 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMGD1_RS08685 0de24f8aaf4ced1aea3d15edaa400cdc 662 Gene3D G3DSA:2.170.130.10 31 161 1.2E-35 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMGD1_RS08685 0de24f8aaf4ced1aea3d15edaa400cdc 662 Pfam PF00593 TonB dependent receptor 431 661 8.5E-32 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMGD1_RS08685 0de24f8aaf4ced1aea3d15edaa400cdc 662 PANTHER PTHR32552 5 662 8.5E-56 T 22-04-2016 SMGD1_RS08685 0de24f8aaf4ced1aea3d15edaa400cdc 662 Pfam PF07715 TonB-dependent Receptor Plug Domain 47 153 6.4E-24 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMGD1_RS08685 0de24f8aaf4ced1aea3d15edaa400cdc 662 SUPERFAMILY SSF56935 30 662 7.33E-113 T 22-04-2016 SMGD1_RS01975 10104cdbb84c429e7b05528f398b8c91 157 PANTHER PTHR11102 7 141 2.6E-14 T 22-04-2016 SMGD1_RS01975 10104cdbb84c429e7b05528f398b8c91 157 SUPERFAMILY SSF81901 24 145 1.57E-22 T 22-04-2016 SMGD1_RS01975 10104cdbb84c429e7b05528f398b8c91 157 Gene3D G3DSA:1.25.40.10 24 146 3.4E-24 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS01975 10104cdbb84c429e7b05528f398b8c91 157 SMART SM00671 107 142 1.2E-4 T 22-04-2016 IPR006597 Sel1-like repeat SMGD1_RS01975 10104cdbb84c429e7b05528f398b8c91 157 SMART SM00671 36 71 7.0E-4 T 22-04-2016 IPR006597 Sel1-like repeat SMGD1_RS01975 10104cdbb84c429e7b05528f398b8c91 157 SMART SM00671 72 106 25.0 T 22-04-2016 IPR006597 Sel1-like repeat SMGD1_RS01975 10104cdbb84c429e7b05528f398b8c91 157 Pfam PF08238 Sel1 repeat 108 141 0.029 T 22-04-2016 IPR006597 Sel1-like repeat SMGD1_RS01975 10104cdbb84c429e7b05528f398b8c91 157 Pfam PF08238 Sel1 repeat 92 106 51.0 T 22-04-2016 IPR006597 Sel1-like repeat SMGD1_RS01975 10104cdbb84c429e7b05528f398b8c91 157 Pfam PF08238 Sel1 repeat 42 67 0.78 T 22-04-2016 IPR006597 Sel1-like repeat SMGD1_RS01975 10104cdbb84c429e7b05528f398b8c91 157 PANTHER PTHR11102:SF64 7 141 2.6E-14 T 22-04-2016 SMGD1_RS06665 541c35cd75abbe9d89ee3930e821361c 341 PIRSF PIRSF004869 2 314 3.4E-101 T 22-04-2016 IPR016431 Pyruvate-formate lyase-activating enzyme, predicted SMGD1_RS06665 541c35cd75abbe9d89ee3930e821361c 341 PANTHER PTHR30352:SF5 1 341 1.1E-159 T 22-04-2016 SMGD1_RS06665 541c35cd75abbe9d89ee3930e821361c 341 PANTHER PTHR30352 1 341 1.1E-159 T 22-04-2016 SMGD1_RS06665 541c35cd75abbe9d89ee3930e821361c 341 SUPERFAMILY SSF102114 47 313 8.11E-38 T 22-04-2016 SMGD1_RS06665 541c35cd75abbe9d89ee3930e821361c 341 Pfam PF04055 Radical SAM superfamily 80 236 2.3E-24 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SMGD1_RS06665 541c35cd75abbe9d89ee3930e821361c 341 TIGRFAM TIGR04337 AmmeMemoSam_rS: AmmeMemoRadiSam system radical SAM enzyme 9 340 2.9E-113 T 22-04-2016 IPR027596 AmmeMemoRadiSam system radical SAM enzyme SMGD1_RS06665 541c35cd75abbe9d89ee3930e821361c 341 SMART SM00729 73 280 1.1E-4 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 SMGD1_RS06665 541c35cd75abbe9d89ee3930e821361c 341 Gene3D G3DSA:3.80.30.10 124 288 3.2E-39 T 22-04-2016 SMGD1_RS03555 d479082698f7946a329d1ea1749ff6b1 361 SMART SM00086 81 123 2.3E-8 T 22-04-2016 IPR001610 PAC motif SMGD1_RS03555 d479082698f7946a329d1ea1749ff6b1 361 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 183 355 1.5E-14 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 SMGD1_RS03555 d479082698f7946a329d1ea1749ff6b1 361 PANTHER PTHR24423 9 135 2.0E-15 T 22-04-2016 SMGD1_RS03555 d479082698f7946a329d1ea1749ff6b1 361 PANTHER PTHR24423:SF442 9 135 2.0E-15 T 22-04-2016 SMGD1_RS03555 d479082698f7946a329d1ea1749ff6b1 361 Pfam PF13426 PAS domain 25 122 2.4E-16 T 22-04-2016 IPR000014 PAS domain SMGD1_RS03555 d479082698f7946a329d1ea1749ff6b1 361 SMART SM00331 156 357 0.0012 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 SMGD1_RS03555 d479082698f7946a329d1ea1749ff6b1 361 Gene3D G3DSA:3.30.450.20 23 122 1.1E-24 T 22-04-2016 SMGD1_RS03555 d479082698f7946a329d1ea1749ff6b1 361 SUPERFAMILY SSF55785 23 120 6.28E-26 T 22-04-2016 IPR000014 PAS domain SMGD1_RS03555 d479082698f7946a329d1ea1749ff6b1 361 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 10 127 2.2E-18 T 22-04-2016 IPR000014 PAS domain SMGD1_RS05545 d2fb7f0579188c603c81383cc446cbec 397 SUPERFAMILY SSF56954 5 388 3.66E-25 T 22-04-2016 SMGD1_RS05545 d2fb7f0579188c603c81383cc446cbec 397 Gene3D G3DSA:1.20.1600.10 15 389 1.5E-12 T 22-04-2016 SMGD1_RS05545 d2fb7f0579188c603c81383cc446cbec 397 Pfam PF02321 Outer membrane efflux protein 230 394 3.6E-7 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SMGD1_RS05545 d2fb7f0579188c603c81383cc446cbec 397 Pfam PF02321 Outer membrane efflux protein 19 199 1.5E-7 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SMGD1_RS03385 d757ada04c747017551034fc652e7ba2 200 Pfam PF02661 Fic/DOC family 59 152 2.9E-18 T 22-04-2016 IPR003812 Fido domain SMGD1_RS03385 d757ada04c747017551034fc652e7ba2 200 SUPERFAMILY SSF140931 37 195 5.23E-32 T 22-04-2016 IPR003812 Fido domain SMGD1_RS03385 d757ada04c747017551034fc652e7ba2 200 Gene3D G3DSA:1.10.3290.10 27 195 3.6E-35 T 22-04-2016 IPR003812 Fido domain SMGD1_RS03385 d757ada04c747017551034fc652e7ba2 200 PANTHER PTHR13504 35 194 1.1E-20 T 22-04-2016 SMGD1_RS03385 d757ada04c747017551034fc652e7ba2 200 TIGRFAM TIGR02613 mob_myst_B: mobile mystery protein B 11 194 2.0E-50 T 22-04-2016 IPR013436 Mobile mystery protein B SMGD1_RS07785 0da51ba65865fcb77fa99137c821e221 226 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 2 224 4.4E-51 T 22-04-2016 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 SMGD1_RS07785 0da51ba65865fcb77fa99137c821e221 226 SUPERFAMILY SSF75217 62 221 7.85E-38 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases SMGD1_RS07785 0da51ba65865fcb77fa99137c821e221 226 Gene3D G3DSA:3.30.1330.30 2 69 3.1E-9 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like SMGD1_RS07785 0da51ba65865fcb77fa99137c821e221 226 SMART SM00967 2 74 1.3E-9 T 22-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 SMGD1_RS07785 0da51ba65865fcb77fa99137c821e221 226 PANTHER PTHR12029 1 221 1.8E-49 T 22-04-2016 SMGD1_RS07785 0da51ba65865fcb77fa99137c821e221 226 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 3 72 2.2E-8 T 22-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 SMGD1_RS07785 0da51ba65865fcb77fa99137c821e221 226 SUPERFAMILY SSF55315 1 71 7.53E-11 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like SMGD1_RS07785 0da51ba65865fcb77fa99137c821e221 226 Pfam PF00588 SpoU rRNA Methylase family 84 221 7.0E-34 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 SMGD1_RS07785 0da51ba65865fcb77fa99137c821e221 226 Gene3D G3DSA:3.40.1280.10 82 224 1.0E-39 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SMGD1_RS13255 098a4966429df1b323e5768faab16c7b 171 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 20 92 5.0E-10 T 22-04-2016 IPR004564 Outer membrane lipoprotein carrier protein LolA-like SMGD1_RS13255 098a4966429df1b323e5768faab16c7b 171 Gene3D G3DSA:2.50.20.10 17 97 3.1E-14 T 22-04-2016 SMGD1_RS13255 098a4966429df1b323e5768faab16c7b 171 Gene3D G3DSA:2.50.20.10 106 170 2.4E-8 T 22-04-2016 SMGD1_RS13255 098a4966429df1b323e5768faab16c7b 171 SUPERFAMILY SSF89392 16 170 4.32E-23 T 22-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX SMGD1_RS03100 84fd903f3ac829abaa24f87315c70b31 585 Pfam PF13177 DNA polymerase III, delta subunit 22 180 1.5E-46 T 22-04-2016 SMGD1_RS03100 84fd903f3ac829abaa24f87315c70b31 585 Gene3D G3DSA:1.10.8.60 169 245 1.4E-29 T 22-04-2016 SMGD1_RS03100 84fd903f3ac829abaa24f87315c70b31 585 SUPERFAMILY SSF52540 36 229 3.9E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS03100 84fd903f3ac829abaa24f87315c70b31 585 Gene3D G3DSA:3.40.50.300 17 168 6.3E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS03100 84fd903f3ac829abaa24f87315c70b31 585 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 6 298 3.0E-122 T 22-04-2016 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 SMGD1_RS03100 84fd903f3ac829abaa24f87315c70b31 585 SMART SM00382 39 181 1.3E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain SMGD1_RS03100 84fd903f3ac829abaa24f87315c70b31 585 PANTHER PTHR11669:SF0 6 432 1.2E-129 T 22-04-2016 SMGD1_RS03100 84fd903f3ac829abaa24f87315c70b31 585 PANTHER PTHR11669 6 432 1.2E-129 T 22-04-2016 SMGD1_RS05405 15b8f4afa7d109564c2a83ad64697857 183 SUPERFAMILY SSF82649 13 155 1.07E-11 T 22-04-2016 SMGD1_RS05405 15b8f4afa7d109564c2a83ad64697857 183 Gene3D G3DSA:3.90.1010.10 12 89 1.0E-5 T 22-04-2016 SMGD1_RS05405 15b8f4afa7d109564c2a83ad64697857 183 Pfam PF01592 NifU-like N terminal domain 12 106 1.6E-7 T 22-04-2016 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 SMGD1_RS12795 afe5c4f7ea2ed877a16ee12f778ee177 359 Gene3D G3DSA:1.10.287.130 152 208 3.1E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS12795 afe5c4f7ea2ed877a16ee12f778ee177 359 SUPERFAMILY SSF55874 217 349 1.58E-13 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS12795 afe5c4f7ea2ed877a16ee12f778ee177 359 SMART SM00388 158 213 0.0037 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS12795 afe5c4f7ea2ed877a16ee12f778ee177 359 PANTHER PTHR24423:SF565 156 338 5.2E-12 T 22-04-2016 SMGD1_RS12795 afe5c4f7ea2ed877a16ee12f778ee177 359 PANTHER PTHR24423:SF565 27 50 5.2E-12 T 22-04-2016 SMGD1_RS12795 afe5c4f7ea2ed877a16ee12f778ee177 359 Gene3D G3DSA:3.30.565.10 219 347 2.0E-10 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS12795 afe5c4f7ea2ed877a16ee12f778ee177 359 PANTHER PTHR24423 156 338 5.2E-12 T 22-04-2016 SMGD1_RS12795 afe5c4f7ea2ed877a16ee12f778ee177 359 PANTHER PTHR24423 27 50 5.2E-12 T 22-04-2016 SMGD1_RS12795 afe5c4f7ea2ed877a16ee12f778ee177 359 SUPERFAMILY SSF47384 151 207 3.34E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS12795 afe5c4f7ea2ed877a16ee12f778ee177 359 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 265 349 8.1E-6 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS07600 de5459cb67b8c9fca180e4e22b46d1a6 56 PIRSF PIRSF000071 1 56 8.2E-26 T 22-04-2016 IPR024922 Rubredoxin GO:0005506|GO:0009055 SMGD1_RS07600 de5459cb67b8c9fca180e4e22b46d1a6 56 SUPERFAMILY SSF57802 2 55 1.33E-22 T 22-04-2016 SMGD1_RS07600 de5459cb67b8c9fca180e4e22b46d1a6 56 PRINTS PR00163 Rubredoxin signature 34 50 1.9E-11 T 22-04-2016 IPR024935 Rubredoxin domain GO:0005506 SMGD1_RS07600 de5459cb67b8c9fca180e4e22b46d1a6 56 PRINTS PR00163 Rubredoxin signature 4 20 1.9E-11 T 22-04-2016 IPR024935 Rubredoxin domain GO:0005506 SMGD1_RS07600 de5459cb67b8c9fca180e4e22b46d1a6 56 Gene3D G3DSA:2.20.28.10 2 54 8.7E-26 T 22-04-2016 IPR004039 Rubredoxin-type fold SMGD1_RS07600 de5459cb67b8c9fca180e4e22b46d1a6 56 ProSitePatterns PS00202 Rubredoxin signature. 34 44 - T 22-04-2016 IPR018527 Rubredoxin, iron-binding site GO:0046872 SMGD1_RS07600 de5459cb67b8c9fca180e4e22b46d1a6 56 Pfam PF00301 Rubredoxin 4 50 5.3E-24 T 22-04-2016 IPR024935 Rubredoxin domain GO:0005506 SMGD1_RS01815 550c212e7d82f1d640f002a90b7f95b7 238 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 1 230 3.2E-77 T 22-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 SMGD1_RS01815 550c212e7d82f1d640f002a90b7f95b7 238 SUPERFAMILY SSF53448 2 237 3.52E-47 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMGD1_RS01815 550c212e7d82f1d640f002a90b7f95b7 238 Gene3D G3DSA:3.90.550.10 2 237 1.6E-60 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMGD1_RS01815 550c212e7d82f1d640f002a90b7f95b7 238 Pfam PF02348 Cytidylyltransferase 1 212 7.9E-50 T 22-04-2016 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 SMGD1_RS01815 550c212e7d82f1d640f002a90b7f95b7 238 PANTHER PTHR21485:SF4 1 237 1.7E-80 T 22-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 SMGD1_RS01815 550c212e7d82f1d640f002a90b7f95b7 238 PANTHER PTHR21485 1 237 1.7E-80 T 22-04-2016 SMGD1_RS08090 fb3cd035feb1df00c5c260f06da36ca3 334 Pfam PF12849 PBP superfamily domain 21 303 4.6E-56 T 22-04-2016 IPR024370 PBP domain SMGD1_RS08090 fb3cd035feb1df00c5c260f06da36ca3 334 Gene3D G3DSA:3.40.190.10 177 330 1.2E-16 T 22-04-2016 SMGD1_RS08090 fb3cd035feb1df00c5c260f06da36ca3 334 PANTHER PTHR30570:SF0 1 329 2.4E-120 T 22-04-2016 SMGD1_RS08090 fb3cd035feb1df00c5c260f06da36ca3 334 PIRSF PIRSF002756 6 334 1.8E-106 T 22-04-2016 IPR005673 ABC transporter, phosphate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 SMGD1_RS08090 fb3cd035feb1df00c5c260f06da36ca3 334 Gene3D G3DSA:3.40.190.10 24 166 2.4E-51 T 22-04-2016 SMGD1_RS08090 fb3cd035feb1df00c5c260f06da36ca3 334 SUPERFAMILY SSF53850 25 331 6.52E-91 T 22-04-2016 SMGD1_RS08090 fb3cd035feb1df00c5c260f06da36ca3 334 PANTHER PTHR30570 1 329 2.4E-120 T 22-04-2016 SMGD1_RS08090 fb3cd035feb1df00c5c260f06da36ca3 334 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 25 331 4.7E-107 T 22-04-2016 IPR005673 ABC transporter, phosphate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 SMGD1_RS09035 7ecf4c1317e9f4038de1a5eca0edd7bc 642 Pfam PF00990 Diguanylate cyclase, GGDEF domain 486 637 1.3E-41 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS09035 7ecf4c1317e9f4038de1a5eca0edd7bc 642 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 483 640 1.0E-48 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS09035 7ecf4c1317e9f4038de1a5eca0edd7bc 642 Pfam PF02743 Cache domain 141 361 7.4E-14 T 22-04-2016 IPR033479 Double Cache domain 1 SMGD1_RS09035 7ecf4c1317e9f4038de1a5eca0edd7bc 642 Gene3D G3DSA:3.30.70.270 487 640 5.8E-49 T 22-04-2016 SMGD1_RS09035 7ecf4c1317e9f4038de1a5eca0edd7bc 642 Gene3D G3DSA:3.30.450.20 213 294 8.1E-19 T 22-04-2016 SMGD1_RS09035 7ecf4c1317e9f4038de1a5eca0edd7bc 642 Gene3D G3DSA:3.30.450.20 328 376 8.1E-19 T 22-04-2016 SMGD1_RS09035 7ecf4c1317e9f4038de1a5eca0edd7bc 642 SMART SM00267 470 642 2.4E-49 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS09035 7ecf4c1317e9f4038de1a5eca0edd7bc 642 PANTHER PTHR10799 518 637 7.1E-21 T 22-04-2016 SMGD1_RS09035 7ecf4c1317e9f4038de1a5eca0edd7bc 642 PANTHER PTHR10799 141 286 7.1E-21 T 22-04-2016 SMGD1_RS09035 7ecf4c1317e9f4038de1a5eca0edd7bc 642 PANTHER PTHR10799:SF710 518 637 7.1E-21 T 22-04-2016 SMGD1_RS09035 7ecf4c1317e9f4038de1a5eca0edd7bc 642 PANTHER PTHR10799:SF710 141 286 7.1E-21 T 22-04-2016 SMGD1_RS09035 7ecf4c1317e9f4038de1a5eca0edd7bc 642 SUPERFAMILY SSF55073 490 640 3.92E-45 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS12355 359eef49bb41326c70a1aa16e0169ff6 380 SMART SM00897 24 216 1.3E-30 T 22-04-2016 IPR013702 FIST domain, N-terminal SMGD1_RS12355 359eef49bb41326c70a1aa16e0169ff6 380 Pfam PF10442 FIST C domain 217 354 9.0E-26 T 22-04-2016 IPR019494 FIST, C-domain SMGD1_RS12355 359eef49bb41326c70a1aa16e0169ff6 380 PANTHER PTHR40252 27 375 8.4E-59 T 22-04-2016 SMGD1_RS12355 359eef49bb41326c70a1aa16e0169ff6 380 Pfam PF08495 FIST N domain 27 215 2.4E-27 T 22-04-2016 IPR013702 FIST domain, N-terminal SMGD1_RS12355 359eef49bb41326c70a1aa16e0169ff6 380 PANTHER PTHR40252:SF1 27 375 8.4E-59 T 22-04-2016 SMGD1_RS12355 359eef49bb41326c70a1aa16e0169ff6 380 SMART SM01204 217 356 1.9E-32 T 22-04-2016 IPR019494 FIST, C-domain SMGD1_RS13135 1ebf370270216e8388dd0162035210db 143 SUPERFAMILY SSF51735 10 139 1.05E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS13135 1ebf370270216e8388dd0162035210db 143 PANTHER PTHR33303 8 143 1.6E-43 T 22-04-2016 SMGD1_RS13135 1ebf370270216e8388dd0162035210db 143 SMART SM00881 19 112 2.2E-20 T 22-04-2016 IPR003781 CoA-binding GO:0048037 SMGD1_RS13135 1ebf370270216e8388dd0162035210db 143 Gene3D G3DSA:3.40.50.720 9 141 1.1E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS13135 1ebf370270216e8388dd0162035210db 143 Pfam PF13380 CoA binding domain 23 139 5.3E-38 T 22-04-2016 IPR003781 CoA-binding GO:0048037 SMGD1_RS05875 b6b5ff425ac16e3621f43318ddabd122 357 TIGRFAM TIGR00033 aroC: chorismate synthase 8 345 1.9E-128 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 SMGD1_RS05875 b6b5ff425ac16e3621f43318ddabd122 357 ProSitePatterns PS00787 Chorismate synthase signature 1. 14 29 - T 22-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 SMGD1_RS05875 b6b5ff425ac16e3621f43318ddabd122 357 Pfam PF01264 Chorismate synthase 8 342 7.6E-137 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 SMGD1_RS05875 b6b5ff425ac16e3621f43318ddabd122 357 SUPERFAMILY SSF103263 2 348 3.92E-138 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 SMGD1_RS05875 b6b5ff425ac16e3621f43318ddabd122 357 PIRSF PIRSF001456 1 357 5.7E-139 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 SMGD1_RS05875 b6b5ff425ac16e3621f43318ddabd122 357 PANTHER PTHR21085 1 346 3.6E-181 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 SMGD1_RS05875 b6b5ff425ac16e3621f43318ddabd122 357 Hamap MF_00300 Chorismate synthase [aroC]. 8 349 36.566 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 SMGD1_RS05875 b6b5ff425ac16e3621f43318ddabd122 357 ProSitePatterns PS00789 Chorismate synthase signature 3. 316 332 - T 22-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 SMGD1_RS05875 b6b5ff425ac16e3621f43318ddabd122 357 ProSitePatterns PS00788 Chorismate synthase signature 2. 122 138 - T 22-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 SMGD1_RS05875 b6b5ff425ac16e3621f43318ddabd122 357 Gene3D G3DSA:3.60.150.10 8 348 4.4E-148 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 SMGD1_RS11090 28c0bce3e20473f5d3405bb7f8e67d0d 604 PANTHER PTHR30026 5 441 1.5E-57 T 22-04-2016 SMGD1_RS11090 28c0bce3e20473f5d3405bb7f8e67d0d 604 SUPERFAMILY SSF103088 483 599 2.09E-13 T 22-04-2016 IPR006665 OmpA-like domain SMGD1_RS11090 28c0bce3e20473f5d3405bb7f8e67d0d 604 Pfam PF00691 OmpA family 495 592 2.0E-8 T 22-04-2016 IPR006665 OmpA-like domain SMGD1_RS11090 28c0bce3e20473f5d3405bb7f8e67d0d 604 Gene3D G3DSA:3.30.1330.60 484 599 1.0E-13 T 22-04-2016 IPR006665 OmpA-like domain SMGD1_RS11090 28c0bce3e20473f5d3405bb7f8e67d0d 604 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 17 427 3.4E-71 T 22-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 SMGD1_RS11090 28c0bce3e20473f5d3405bb7f8e67d0d 604 Pfam PF02321 Outer membrane efflux protein 24 211 1.1E-25 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SMGD1_RS11090 28c0bce3e20473f5d3405bb7f8e67d0d 604 Pfam PF02321 Outer membrane efflux protein 233 416 8.7E-21 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SMGD1_RS11090 28c0bce3e20473f5d3405bb7f8e67d0d 604 SUPERFAMILY SSF56954 5 420 3.79E-65 T 22-04-2016 SMGD1_RS11090 28c0bce3e20473f5d3405bb7f8e67d0d 604 Gene3D G3DSA:1.20.1600.10 16 419 8.9E-53 T 22-04-2016 SMGD1_RS11090 28c0bce3e20473f5d3405bb7f8e67d0d 604 PANTHER PTHR30026:SF4 5 441 1.5E-57 T 22-04-2016 SMGD1_RS04835 56e044295648b19373cbf0b63c878520 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 7.3E-28 T 22-04-2016 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 SMGD1_RS04835 56e044295648b19373cbf0b63c878520 72 Gene3D G3DSA:2.40.50.140 1 72 1.8E-37 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMGD1_RS04835 56e044295648b19373cbf0b63c878520 72 SUPERFAMILY SSF50249 1 71 1.63E-27 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMGD1_RS04835 56e044295648b19373cbf0b63c878520 72 PANTHER PTHR33370 1 72 1.4E-43 T 22-04-2016 SMGD1_RS04835 56e044295648b19373cbf0b63c878520 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 71 1.0E-34 T 22-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 SMGD1_RS04835 56e044295648b19373cbf0b63c878520 72 SMART SM00316 4 72 2.7E-5 T 22-04-2016 IPR022967 RNA-binding domain, S1 SMGD1_RS04835 56e044295648b19373cbf0b63c878520 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 26.353 T 22-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 SMGD1_RS09310 5d88487acac262faf5e1c69958052c34 570 SUPERFAMILY SSF103088 443 567 4.71E-7 T 22-04-2016 IPR006665 OmpA-like domain SMGD1_RS09310 5d88487acac262faf5e1c69958052c34 570 Gene3D G3DSA:3.30.1330.60 442 568 1.1E-10 T 22-04-2016 IPR006665 OmpA-like domain SMGD1_RS04045 10e95f24dbc97ed0b0762aa78e70344e 807 PIRSF PIRSF001174 1 807 9.8E-291 T 22-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 SMGD1_RS04045 10e95f24dbc97ed0b0762aa78e70344e 807 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 677 804 4.6E-49 T 22-04-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 SMGD1_RS04045 10e95f24dbc97ed0b0762aa78e70344e 807 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 580 660 1.6E-24 T 22-04-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 SMGD1_RS04045 10e95f24dbc97ed0b0762aa78e70344e 807 SMART SM00382 357 502 1.1E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain SMGD1_RS04045 10e95f24dbc97ed0b0762aa78e70344e 807 Hamap MF_01973 Lon protease [lon]. 13 804 58.319 T 22-04-2016 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 SMGD1_RS04045 10e95f24dbc97ed0b0762aa78e70344e 807 Gene3D G3DSA:3.30.230.10 600 802 2.0E-65 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SMGD1_RS04045 10e95f24dbc97ed0b0762aa78e70344e 807 Gene3D G3DSA:1.10.8.60 510 594 2.0E-29 T 22-04-2016 SMGD1_RS04045 10e95f24dbc97ed0b0762aa78e70344e 807 TIGRFAM TIGR00763 lon: endopeptidase La 15 803 3.6E-264 T 22-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 SMGD1_RS04045 10e95f24dbc97ed0b0762aa78e70344e 807 SMART SM00464 12 203 2.0E-30 T 22-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 SMGD1_RS04045 10e95f24dbc97ed0b0762aa78e70344e 807 SUPERFAMILY SSF52540 315 578 7.4E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS04045 10e95f24dbc97ed0b0762aa78e70344e 807 SUPERFAMILY SSF88697 12 201 1.64E-18 T 22-04-2016 IPR015947 PUA-like domain SMGD1_RS04045 10e95f24dbc97ed0b0762aa78e70344e 807 SUPERFAMILY SSF54211 605 803 1.02E-43 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SMGD1_RS04045 10e95f24dbc97ed0b0762aa78e70344e 807 PANTHER PTHR10046 688 807 1.2E-289 T 22-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 SMGD1_RS04045 10e95f24dbc97ed0b0762aa78e70344e 807 PANTHER PTHR10046 8 672 1.2E-289 T 22-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 SMGD1_RS04045 10e95f24dbc97ed0b0762aa78e70344e 807 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 13 201 1.1E-19 T 22-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 SMGD1_RS04045 10e95f24dbc97ed0b0762aa78e70344e 807 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 757 775 7.2E-47 T 22-04-2016 SMGD1_RS04045 10e95f24dbc97ed0b0762aa78e70344e 807 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 605 621 7.2E-47 T 22-04-2016 SMGD1_RS04045 10e95f24dbc97ed0b0762aa78e70344e 807 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 734 753 7.2E-47 T 22-04-2016 SMGD1_RS04045 10e95f24dbc97ed0b0762aa78e70344e 807 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 365 384 7.2E-47 T 22-04-2016 SMGD1_RS04045 10e95f24dbc97ed0b0762aa78e70344e 807 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 704 723 7.2E-47 T 22-04-2016 SMGD1_RS04045 10e95f24dbc97ed0b0762aa78e70344e 807 PANTHER PTHR10046:SF24 688 807 1.2E-289 T 22-04-2016 SMGD1_RS04045 10e95f24dbc97ed0b0762aa78e70344e 807 PANTHER PTHR10046:SF24 8 672 1.2E-289 T 22-04-2016 SMGD1_RS04045 10e95f24dbc97ed0b0762aa78e70344e 807 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 707 715 - T 22-04-2016 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 SMGD1_RS04045 10e95f24dbc97ed0b0762aa78e70344e 807 Gene3D G3DSA:3.40.50.300 314 509 1.9E-30 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS04045 10e95f24dbc97ed0b0762aa78e70344e 807 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 361 498 1.1E-23 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SMGD1_RS12230 d3026d16fd763d0785bf5b2e093e7852 271 PANTHER PTHR30349:SF5 5 271 8.9E-66 T 22-04-2016 SMGD1_RS12230 d3026d16fd763d0785bf5b2e093e7852 271 SUPERFAMILY SSF56349 94 268 1.85E-47 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 SMGD1_RS12230 d3026d16fd763d0785bf5b2e093e7852 271 Gene3D G3DSA:1.10.150.130 3 81 2.7E-10 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal SMGD1_RS12230 d3026d16fd763d0785bf5b2e093e7852 271 Pfam PF00589 Phage integrase family 115 257 9.9E-31 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 SMGD1_RS12230 d3026d16fd763d0785bf5b2e093e7852 271 SUPERFAMILY SSF47823 5 82 2.94E-9 T 22-04-2016 IPR010998 Integrase, Lambda-type, N-terminal SMGD1_RS12230 d3026d16fd763d0785bf5b2e093e7852 271 Gene3D G3DSA:1.10.443.10 99 264 9.2E-45 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 SMGD1_RS12230 d3026d16fd763d0785bf5b2e093e7852 271 PANTHER PTHR30349 5 271 8.9E-66 T 22-04-2016 SMGD1_RS12230 d3026d16fd763d0785bf5b2e093e7852 271 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 5 78 3.2E-12 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 SMGD1_RS13100 eb0ff010c2222a2fa340ba8727e79dc5 254 SUPERFAMILY SSF48150 194 251 5.13E-5 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 SMGD1_RS13100 eb0ff010c2222a2fa340ba8727e79dc5 254 Pfam PF09674 Protein of unknown function (DUF2400) 33 251 2.1E-69 T 22-04-2016 IPR014127 Conserved hypothetical protein CHP02757 SMGD1_RS13100 eb0ff010c2222a2fa340ba8727e79dc5 254 TIGRFAM TIGR02757 TIGR02757: TIGR02757 family protein 32 252 9.3E-75 T 22-04-2016 IPR014127 Conserved hypothetical protein CHP02757 SMGD1_RS09745 7197a8742c94fcc55312c7a396ed5ba9 173 Pfam PF13242 HAD-hyrolase-like 101 145 1.3E-10 T 22-04-2016 SMGD1_RS09745 7197a8742c94fcc55312c7a396ed5ba9 173 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 3 146 4.2E-39 T 22-04-2016 IPR006543 Histidinol-phosphate phosphatase GO:0016791 SMGD1_RS09745 7197a8742c94fcc55312c7a396ed5ba9 173 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 83 140 2.2E-6 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SMGD1_RS09745 7197a8742c94fcc55312c7a396ed5ba9 173 PANTHER PTHR23133:SF3 1 139 2.8E-48 T 22-04-2016 SMGD1_RS09745 7197a8742c94fcc55312c7a396ed5ba9 173 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 3 143 2.9E-32 T 22-04-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA SMGD1_RS09745 7197a8742c94fcc55312c7a396ed5ba9 173 PANTHER PTHR23133 1 139 2.8E-48 T 22-04-2016 SMGD1_RS09745 7197a8742c94fcc55312c7a396ed5ba9 173 SUPERFAMILY SSF56784 1 168 3.92E-44 T 22-04-2016 IPR023214 HAD-like domain SMGD1_RS09745 7197a8742c94fcc55312c7a396ed5ba9 173 TIGRFAM TIGR00213 GmhB_yaeD: D,D-heptose 1,7-bisphosphate phosphatase 2 158 5.8E-60 T 22-04-2016 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 SMGD1_RS09745 7197a8742c94fcc55312c7a396ed5ba9 173 Gene3D G3DSA:3.40.50.1000 1 168 7.7E-53 T 22-04-2016 IPR023214 HAD-like domain SMGD1_RS09745 7197a8742c94fcc55312c7a396ed5ba9 173 PIRSF PIRSF004682 1 172 1.4E-58 T 22-04-2016 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 SMGD1_RS12265 072b3482a2e7c9f3a123c01c7494f965 650 Gene3D G3DSA:3.20.20.450 400 647 2.1E-90 T 22-04-2016 IPR001633 EAL domain SMGD1_RS12265 072b3482a2e7c9f3a123c01c7494f965 650 SUPERFAMILY SSF141868 401 647 2.88E-86 T 22-04-2016 IPR001633 EAL domain SMGD1_RS12265 072b3482a2e7c9f3a123c01c7494f965 650 Gene3D G3DSA:3.30.70.270 224 390 7.2E-58 T 22-04-2016 SMGD1_RS12265 072b3482a2e7c9f3a123c01c7494f965 650 SMART SM00052 394 640 3.0E-106 T 22-04-2016 IPR001633 EAL domain SMGD1_RS12265 072b3482a2e7c9f3a123c01c7494f965 650 PANTHER PTHR10799 256 474 3.0E-78 T 22-04-2016 SMGD1_RS12265 072b3482a2e7c9f3a123c01c7494f965 650 PANTHER PTHR10799 46 192 3.0E-78 T 22-04-2016 SMGD1_RS12265 072b3482a2e7c9f3a123c01c7494f965 650 PANTHER PTHR10799 604 623 3.0E-78 T 22-04-2016 SMGD1_RS12265 072b3482a2e7c9f3a123c01c7494f965 650 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 219 382 8.0E-49 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS12265 072b3482a2e7c9f3a123c01c7494f965 650 SMART SM00267 212 384 2.3E-65 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS12265 072b3482a2e7c9f3a123c01c7494f965 650 PANTHER PTHR10799:SF774 256 474 3.0E-78 T 22-04-2016 SMGD1_RS12265 072b3482a2e7c9f3a123c01c7494f965 650 PANTHER PTHR10799:SF774 46 192 3.0E-78 T 22-04-2016 SMGD1_RS12265 072b3482a2e7c9f3a123c01c7494f965 650 PANTHER PTHR10799:SF774 604 623 3.0E-78 T 22-04-2016 SMGD1_RS12265 072b3482a2e7c9f3a123c01c7494f965 650 Pfam PF00990 Diguanylate cyclase, GGDEF domain 223 380 2.5E-52 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS12265 072b3482a2e7c9f3a123c01c7494f965 650 Pfam PF00563 EAL domain 401 635 5.1E-72 T 22-04-2016 IPR001633 EAL domain SMGD1_RS12265 072b3482a2e7c9f3a123c01c7494f965 650 SUPERFAMILY SSF55073 228 386 1.8E-51 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS11995 1e23f32f04543d7fdda8c16b43f3b0ab 505 Pfam PF01336 OB-fold nucleic acid binding domain 61 138 1.0E-11 T 22-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 SMGD1_RS11995 1e23f32f04543d7fdda8c16b43f3b0ab 505 PANTHER PTHR22594:SF4 4 505 3.1E-235 T 22-04-2016 SMGD1_RS11995 1e23f32f04543d7fdda8c16b43f3b0ab 505 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 10 497 42.338 T 22-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 SMGD1_RS11995 1e23f32f04543d7fdda8c16b43f3b0ab 505 SUPERFAMILY SSF55681 154 492 2.68E-110 T 22-04-2016 SMGD1_RS11995 1e23f32f04543d7fdda8c16b43f3b0ab 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 254 271 1.2E-38 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 SMGD1_RS11995 1e23f32f04543d7fdda8c16b43f3b0ab 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 191 201 1.2E-38 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 SMGD1_RS11995 1e23f32f04543d7fdda8c16b43f3b0ab 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 376 392 1.2E-38 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 SMGD1_RS11995 1e23f32f04543d7fdda8c16b43f3b0ab 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 236 249 1.2E-38 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 SMGD1_RS11995 1e23f32f04543d7fdda8c16b43f3b0ab 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 207 223 1.2E-38 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 SMGD1_RS11995 1e23f32f04543d7fdda8c16b43f3b0ab 505 SUPERFAMILY SSF50249 5 147 8.14E-32 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMGD1_RS11995 1e23f32f04543d7fdda8c16b43f3b0ab 505 PANTHER PTHR22594 4 505 3.1E-235 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMGD1_RS11995 1e23f32f04543d7fdda8c16b43f3b0ab 505 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 5 493 4.3E-198 T 22-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 SMGD1_RS11995 1e23f32f04543d7fdda8c16b43f3b0ab 505 Gene3D G3DSA:3.30.930.10 149 490 1.3E-113 T 22-04-2016 SMGD1_RS11995 1e23f32f04543d7fdda8c16b43f3b0ab 505 Gene3D G3DSA:2.40.50.140 5 146 3.1E-38 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMGD1_RS11995 1e23f32f04543d7fdda8c16b43f3b0ab 505 Pfam PF00152 tRNA synthetases class II (D, K and N) 154 491 3.4E-75 T 22-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMGD1_RS05115 8ff5ff79c8df6037411a1b21df7f78a8 63 SUPERFAMILY SSF143034 2 62 6.8E-17 T 22-04-2016 SMGD1_RS05115 8ff5ff79c8df6037411a1b21df7f78a8 63 Pfam PF01632 Ribosomal protein L35 2 61 3.0E-19 T 22-04-2016 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS05115 8ff5ff79c8df6037411a1b21df7f78a8 63 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 22-04-2016 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS05115 8ff5ff79c8df6037411a1b21df7f78a8 63 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 63 13.377 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 SMGD1_RS05115 8ff5ff79c8df6037411a1b21df7f78a8 63 PRINTS PR00064 Ribosomal protein L35 signature 3 20 1.4E-7 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 SMGD1_RS05115 8ff5ff79c8df6037411a1b21df7f78a8 63 PRINTS PR00064 Ribosomal protein L35 signature 21 35 1.4E-7 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 SMGD1_RS05115 8ff5ff79c8df6037411a1b21df7f78a8 63 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 62 6.2E-18 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 SMGD1_RS04190 0a67546443919b1f8beca510f8b4f41f 396 Gene3D G3DSA:1.10.710.10 24 229 1.9E-16 T 22-04-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 SMGD1_RS04190 0a67546443919b1f8beca510f8b4f41f 396 SUPERFAMILY SSF48695 26 233 2.47E-19 T 22-04-2016 IPR011031 Multihaem cytochrome SMGD1_RS04190 0a67546443919b1f8beca510f8b4f41f 396 Pfam PF13435 Cytochrome c554 and c-prime 31 131 1.0E-4 T 22-04-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 SMGD1_RS01160 48f6fe8a4f44cbfbdefecd3e23024851 135 Gene3D G3DSA:3.40.50.2300 14 132 2.5E-28 T 22-04-2016 SMGD1_RS01160 48f6fe8a4f44cbfbdefecd3e23024851 135 Pfam PF00072 Response regulator receiver domain 22 129 1.8E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS01160 48f6fe8a4f44cbfbdefecd3e23024851 135 SMART SM00448 19 130 3.6E-19 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS01160 48f6fe8a4f44cbfbdefecd3e23024851 135 SUPERFAMILY SSF52172 18 132 9.11E-28 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS01160 48f6fe8a4f44cbfbdefecd3e23024851 135 PANTHER PTHR26402 19 133 2.2E-24 T 22-04-2016 SMGD1_RS03905 188546edb014154f8ca3b8e8c93d222a 274 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 23 170 2.0E-45 T 22-04-2016 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 SMGD1_RS03905 188546edb014154f8ca3b8e8c93d222a 274 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 1 272 13.858 T 22-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMGD1_RS03905 188546edb014154f8ca3b8e8c93d222a 274 PANTHER PTHR13767 1 203 1.3E-52 T 22-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMGD1_RS03905 188546edb014154f8ca3b8e8c93d222a 274 SUPERFAMILY SSF55120 1 215 4.56E-57 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMGD1_RS03905 188546edb014154f8ca3b8e8c93d222a 274 PANTHER PTHR13767:SF2 1 203 1.3E-52 T 22-04-2016 SMGD1_RS10855 69330b91578d61124b3dfb1d444d471a 109 SMART SM00905 3 105 6.3E-23 T 22-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 SMGD1_RS10855 69330b91578d61124b3dfb1d444d471a 109 SUPERFAMILY SSF55620 2 95 1.5E-20 T 22-04-2016 SMGD1_RS10855 69330b91578d61124b3dfb1d444d471a 109 TIGRFAM TIGR00526 folB_dom: FolB domain 3 102 6.2E-19 T 22-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 SMGD1_RS10855 69330b91578d61124b3dfb1d444d471a 109 Pfam PF02152 Dihydroneopterin aldolase 3 97 8.9E-20 T 22-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 SMGD1_RS10855 69330b91578d61124b3dfb1d444d471a 109 Gene3D G3DSA:3.30.1130.10 2 101 2.8E-22 T 22-04-2016 SMGD1_RS08110 40c334ef5b4107aad98c731e5bb9988e 122 Pfam PF12840 Helix-turn-helix domain 10 82 3.9E-8 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMGD1_RS08110 40c334ef5b4107aad98c731e5bb9988e 122 SUPERFAMILY SSF46785 4 102 3.02E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMGD1_RS08110 40c334ef5b4107aad98c731e5bb9988e 122 Gene3D G3DSA:1.10.10.10 2 107 1.1E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMGD1_RS00230 0f8ed21395e39411aab38570f5caf6de 351 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 3 346 1.2E-83 T 22-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 SMGD1_RS00230 0f8ed21395e39411aab38570f5caf6de 351 PANTHER PTHR30372:SF0 1 347 6.8E-54 T 22-04-2016 SMGD1_RS00230 0f8ed21395e39411aab38570f5caf6de 351 Pfam PF02684 Lipid-A-disaccharide synthetase 3 313 1.5E-83 T 22-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 SMGD1_RS00230 0f8ed21395e39411aab38570f5caf6de 351 SUPERFAMILY SSF53756 1 347 1.41E-9 T 22-04-2016 SMGD1_RS00230 0f8ed21395e39411aab38570f5caf6de 351 PANTHER PTHR30372 1 347 6.8E-54 T 22-04-2016 SMGD1_RS08170 95239b6a7069ce0feb29233bee1d3d3f 451 PANTHER PTHR11907 6 451 1.5E-228 T 22-04-2016 SMGD1_RS08170 95239b6a7069ce0feb29233bee1d3d3f 451 SUPERFAMILY SSF56235 9 231 1.46E-65 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SMGD1_RS08170 95239b6a7069ce0feb29233bee1d3d3f 451 Pfam PF00156 Phosphoribosyl transferase domain 280 379 3.5E-10 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 SMGD1_RS08170 95239b6a7069ce0feb29233bee1d3d3f 451 PIRSF PIRSF000485 5 451 2.2E-171 T 22-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 SMGD1_RS08170 95239b6a7069ce0feb29233bee1d3d3f 451 SUPERFAMILY SSF53271 243 451 8.52E-73 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SMGD1_RS08170 95239b6a7069ce0feb29233bee1d3d3f 451 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 8 451 45.732 T 22-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 SMGD1_RS08170 95239b6a7069ce0feb29233bee1d3d3f 451 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 9 449 4.5E-164 T 22-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 SMGD1_RS08170 95239b6a7069ce0feb29233bee1d3d3f 451 PANTHER PTHR11907:SF0 6 451 1.5E-228 T 22-04-2016 SMGD1_RS08170 95239b6a7069ce0feb29233bee1d3d3f 451 Gene3D G3DSA:3.60.20.10 9 251 6.0E-63 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SMGD1_RS08170 95239b6a7069ce0feb29233bee1d3d3f 451 Pfam PF13537 Glutamine amidotransferase domain 78 206 9.2E-23 T 22-04-2016 IPR017932 Glutamine amidotransferase type 2 domain SMGD1_RS08170 95239b6a7069ce0feb29233bee1d3d3f 451 Gene3D G3DSA:3.40.50.2020 264 430 2.0E-46 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SMGD1_RS14475 9112863d3b694696513016603b366b7b 491 PANTHER PTHR10799:SF750 366 484 1.1E-27 T 22-04-2016 SMGD1_RS14475 9112863d3b694696513016603b366b7b 491 PANTHER PTHR10799:SF750 1 52 1.1E-27 T 22-04-2016 SMGD1_RS14475 9112863d3b694696513016603b366b7b 491 Pfam PF14827 Double sensory domain of two-component sensor kinase 50 285 1.8E-17 T 22-04-2016 IPR029150 Double Cache domain 3 SMGD1_RS14475 9112863d3b694696513016603b366b7b 491 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 336 488 1.8E-42 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS14475 9112863d3b694696513016603b366b7b 491 Gene3D G3DSA:3.30.70.270 339 488 2.8E-46 T 22-04-2016 SMGD1_RS14475 9112863d3b694696513016603b366b7b 491 PANTHER PTHR10799 366 484 1.1E-27 T 22-04-2016 SMGD1_RS14475 9112863d3b694696513016603b366b7b 491 PANTHER PTHR10799 1 52 1.1E-27 T 22-04-2016 SMGD1_RS14475 9112863d3b694696513016603b366b7b 491 SUPERFAMILY SSF103190 58 186 1.49E-7 T 22-04-2016 IPR029151 Periplasmic sensor domain-like SMGD1_RS14475 9112863d3b694696513016603b366b7b 491 SMART SM00267 326 490 2.7E-50 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS14475 9112863d3b694696513016603b366b7b 491 Pfam PF00990 Diguanylate cyclase, GGDEF domain 338 485 5.6E-41 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS14475 9112863d3b694696513016603b366b7b 491 SUPERFAMILY SSF55073 342 487 5.96E-41 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS04790 a7db73bb5fe6449cd39795dad8113439 392 PANTHER PTHR23537:SF1 10 392 1.7E-32 T 22-04-2016 SMGD1_RS04790 a7db73bb5fe6449cd39795dad8113439 392 Pfam PF06779 Uncharacterised MFS-type transporter YbfB 23 380 5.2E-63 T 22-04-2016 IPR010645 Uncharacterised MFS-type transporter YbfB SMGD1_RS04790 a7db73bb5fe6449cd39795dad8113439 392 PANTHER PTHR23537 10 392 1.7E-32 T 22-04-2016 SMGD1_RS04790 a7db73bb5fe6449cd39795dad8113439 392 Gene3D G3DSA:1.20.1250.20 19 188 1.2E-13 T 22-04-2016 SMGD1_RS04790 a7db73bb5fe6449cd39795dad8113439 392 Gene3D G3DSA:1.20.1250.20 210 386 1.8E-14 T 22-04-2016 SMGD1_RS04790 a7db73bb5fe6449cd39795dad8113439 392 SUPERFAMILY SSF103473 14 386 1.96E-38 T 22-04-2016 IPR020846 Major facilitator superfamily domain SMGD1_RS12425 7f799110969c170c0958d8677a424293 139 Gene3D G3DSA:3.10.129.10 10 129 3.9E-39 T 22-04-2016 IPR029069 HotDog domain SMGD1_RS12425 7f799110969c170c0958d8677a424293 139 SUPERFAMILY SSF54637 10 127 5.92E-36 T 22-04-2016 IPR029069 HotDog domain SMGD1_RS12425 7f799110969c170c0958d8677a424293 139 Pfam PF03061 Thioesterase superfamily 43 118 2.0E-19 T 22-04-2016 IPR006683 Thioesterase domain SMGD1_RS12425 7f799110969c170c0958d8677a424293 139 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 13 127 6.1E-27 T 22-04-2016 IPR003736 Phenylacetic acid degradation-related domain SMGD1_RS12425 7f799110969c170c0958d8677a424293 139 PANTHER PTHR12418 9 139 4.8E-29 T 22-04-2016 SMGD1_RS11515 9f202d0dc60a53f08e6634c791f45f10 551 Pfam PF07660 Secretin and TonB N terminus short domain 54 106 6.3E-10 T 22-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 SMGD1_RS11515 9f202d0dc60a53f08e6634c791f45f10 551 TIGRFAM TIGR02519 pilus_MshL: pilus (MSHA type) biogenesis protein MshL 205 493 3.6E-81 T 22-04-2016 IPR013358 Pilus biogenesis, MshL SMGD1_RS11515 9f202d0dc60a53f08e6634c791f45f10 551 PRINTS PR00811 Bacterial general secretion pathway protein D signature 314 338 1.0E-10 T 22-04-2016 IPR001775 GspD/PilQ family SMGD1_RS11515 9f202d0dc60a53f08e6634c791f45f10 551 PRINTS PR00811 Bacterial general secretion pathway protein D signature 239 249 1.0E-10 T 22-04-2016 IPR001775 GspD/PilQ family SMGD1_RS11515 9f202d0dc60a53f08e6634c791f45f10 551 PRINTS PR00811 Bacterial general secretion pathway protein D signature 458 476 1.0E-10 T 22-04-2016 IPR001775 GspD/PilQ family SMGD1_RS11515 9f202d0dc60a53f08e6634c791f45f10 551 PRINTS PR00811 Bacterial general secretion pathway protein D signature 481 495 1.0E-10 T 22-04-2016 IPR001775 GspD/PilQ family SMGD1_RS11515 9f202d0dc60a53f08e6634c791f45f10 551 PANTHER PTHR30332 205 494 1.5E-47 T 22-04-2016 SMGD1_RS11515 9f202d0dc60a53f08e6634c791f45f10 551 Pfam PF07655 Secretin N-terminal domain 109 197 2.2E-12 T 22-04-2016 IPR011514 Secretin, N-terminal GO:0009297|GO:0019867 SMGD1_RS11515 9f202d0dc60a53f08e6634c791f45f10 551 Pfam PF00263 Bacterial type II and III secretion system protein 319 494 1.9E-44 T 22-04-2016 IPR004846 Type II/III secretion system GO:0009306 SMGD1_RS11330 2f9109730b88eefec49da696ff86ba03 113 Hamap MF_00213 Probable hydrogenase nickel incorporation protein HypA [hypA]. 1 113 22.285 T 22-04-2016 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 SMGD1_RS11330 2f9109730b88eefec49da696ff86ba03 113 ProSitePatterns PS01249 Hydrogenases expression/synthesis hypA family signature. 34 76 - T 22-04-2016 IPR020538 Hydrogenase nickel incorporation protein HypA/HybF, conserved site SMGD1_RS11330 2f9109730b88eefec49da696ff86ba03 113 PIRSF PIRSF004761 1 113 7.1E-36 T 22-04-2016 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 SMGD1_RS11330 2f9109730b88eefec49da696ff86ba03 113 Pfam PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA 1 111 1.4E-31 T 22-04-2016 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 SMGD1_RS11330 2f9109730b88eefec49da696ff86ba03 113 PANTHER PTHR34535 2 113 5.1E-40 T 22-04-2016 SMGD1_RS11330 2f9109730b88eefec49da696ff86ba03 113 PANTHER PTHR34535:SF3 2 113 5.1E-40 T 22-04-2016 SMGD1_RS11330 2f9109730b88eefec49da696ff86ba03 113 TIGRFAM TIGR00100 hypA: hydrogenase nickel insertion protein HypA 1 112 1.0E-28 T 22-04-2016 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 SMGD1_RS10050 583c0c2deee98911179d1f16b1fcf324 452 Gene3D G3DSA:3.40.50.300 256 355 3.3E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS10050 583c0c2deee98911179d1f16b1fcf324 452 Gene3D G3DSA:3.40.50.300 16 85 3.3E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS10050 583c0c2deee98911179d1f16b1fcf324 452 SUPERFAMILY SSF52540 222 355 2.66E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS10050 583c0c2deee98911179d1f16b1fcf324 452 SUPERFAMILY SSF52540 19 133 2.66E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS10050 583c0c2deee98911179d1f16b1fcf324 452 Pfam PF02534 Type IV secretory system Conjugative DNA transfer 18 76 4.8E-5 T 22-04-2016 IPR003688 Type IV secretion system protein TraG/VirD4 GO:0009291|GO:0016020 SMGD1_RS10050 583c0c2deee98911179d1f16b1fcf324 452 Pfam PF12696 TraM recognition site of TraD and TraG 299 355 1.1E-4 T 22-04-2016 IPR032689 TraD/TraG, TraM recognition site SMGD1_RS14175 a92f52057345f2f5eb3f2d7f3f8ca124 94 Gene3D G3DSA:1.10.10.60 7 88 5.3E-22 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SMGD1_RS14175 a92f52057345f2f5eb3f2d7f3f8ca124 94 PANTHER PTHR33215 1 90 3.0E-21 T 22-04-2016 SMGD1_RS14175 a92f52057345f2f5eb3f2d7f3f8ca124 94 SUPERFAMILY SSF46689 1 91 9.5E-21 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SMGD1_RS14175 a92f52057345f2f5eb3f2d7f3f8ca124 94 Pfam PF01527 Transposase 5 72 4.1E-16 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SMGD1_RS00125 8f12ba4c55fe9dd49330bd670c8739e8 373 PANTHER PTHR21148 1 371 5.5E-156 T 22-04-2016 SMGD1_RS00125 8f12ba4c55fe9dd49330bd670c8739e8 373 Pfam PF01702 Queuine tRNA-ribosyltransferase 127 366 1.5E-89 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 SMGD1_RS00125 8f12ba4c55fe9dd49330bd670c8739e8 373 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 3 371 1.3E-150 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 SMGD1_RS00125 8f12ba4c55fe9dd49330bd670c8739e8 373 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 3 371 2.7E-158 T 22-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 SMGD1_RS00125 8f12ba4c55fe9dd49330bd670c8739e8 373 SUPERFAMILY SSF51713 1 370 3.79E-146 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 SMGD1_RS00125 8f12ba4c55fe9dd49330bd670c8739e8 373 PANTHER PTHR21148:SF26 1 371 5.5E-156 T 22-04-2016 SMGD1_RS00125 8f12ba4c55fe9dd49330bd670c8739e8 373 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 1 365 53.55 T 22-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 SMGD1_RS00125 8f12ba4c55fe9dd49330bd670c8739e8 373 Gene3D G3DSA:3.20.20.105 1 371 8.5E-152 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 SMGD1_RS12215 12e46f6e032a56763dd54c5add4b7513 96 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 2 96 16.492 T 22-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 SMGD1_RS12215 12e46f6e032a56763dd54c5add4b7513 96 PANTHER PTHR15004 1 96 1.6E-14 T 22-04-2016 SMGD1_RS12215 12e46f6e032a56763dd54c5add4b7513 96 SUPERFAMILY SSF141000 3 94 2.22E-18 T 22-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 SMGD1_RS12215 12e46f6e032a56763dd54c5add4b7513 96 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 4 96 3.0E-20 T 22-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 SMGD1_RS12215 12e46f6e032a56763dd54c5add4b7513 96 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 20 91 1.3E-13 T 22-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 SMGD1_RS12215 12e46f6e032a56763dd54c5add4b7513 96 PANTHER PTHR15004:SF0 1 96 1.6E-14 T 22-04-2016 SMGD1_RS01450 b9b3adfc4c12e832c7cc451b208e0fb2 325 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 13 301 2.1E-77 T 22-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMGD1_RS01450 b9b3adfc4c12e832c7cc451b208e0fb2 325 Gene3D G3DSA:3.10.290.10 12 62 1.9E-12 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SMGD1_RS01450 b9b3adfc4c12e832c7cc451b208e0fb2 325 SUPERFAMILY SSF55174 13 104 3.01E-13 T 22-04-2016 SMGD1_RS01450 b9b3adfc4c12e832c7cc451b208e0fb2 325 SUPERFAMILY SSF55120 79 300 3.68E-62 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMGD1_RS01450 b9b3adfc4c12e832c7cc451b208e0fb2 325 PANTHER PTHR11079 13 312 1.4E-81 T 22-04-2016 SMGD1_RS01450 b9b3adfc4c12e832c7cc451b208e0fb2 325 PANTHER PTHR11079:SF73 13 312 1.4E-81 T 22-04-2016 SMGD1_RS01450 b9b3adfc4c12e832c7cc451b208e0fb2 325 Pfam PF01479 S4 domain 13 58 1.1E-9 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SMGD1_RS01450 b9b3adfc4c12e832c7cc451b208e0fb2 325 SMART SM00363 13 70 7.1E-11 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SMGD1_RS01450 b9b3adfc4c12e832c7cc451b208e0fb2 325 Pfam PF00849 RNA pseudouridylate synthase 86 243 8.4E-30 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMGD1_RS04110 db3bf9268ad76ffe649ceb958b4a6468 134 Gene3D G3DSA:1.10.940.10 1 132 2.7E-43 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 SMGD1_RS04110 db3bf9268ad76ffe649ceb958b4a6468 134 Hamap MF_00073 N utilization substance protein B homolog [nusB]. 2 133 22.251 T 22-04-2016 IPR011605 NusB antitermination factor GO:0006353 SMGD1_RS04110 db3bf9268ad76ffe649ceb958b4a6468 134 Pfam PF01029 NusB family 6 130 1.6E-32 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 SMGD1_RS04110 db3bf9268ad76ffe649ceb958b4a6468 134 SUPERFAMILY SSF48013 3 131 1.31E-36 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 SMGD1_RS04110 db3bf9268ad76ffe649ceb958b4a6468 134 PANTHER PTHR11078 4 131 1.5E-39 T 22-04-2016 IPR011605 NusB antitermination factor GO:0006353 SMGD1_RS04110 db3bf9268ad76ffe649ceb958b4a6468 134 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 4 131 4.6E-41 T 22-04-2016 IPR011605 NusB antitermination factor GO:0006353 SMGD1_RS05150 1f387c752306f6163dcf0bf151a975ce 312 PANTHER PTHR33540:SF1 6 310 4.3E-75 T 22-04-2016 SMGD1_RS05150 1f387c752306f6163dcf0bf151a975ce 312 Pfam PF01636 Phosphotransferase enzyme family 20 225 3.8E-21 T 22-04-2016 IPR002575 Aminoglycoside phosphotransferase SMGD1_RS05150 1f387c752306f6163dcf0bf151a975ce 312 Gene3D G3DSA:3.90.1200.10 88 311 1.3E-59 T 22-04-2016 SMGD1_RS05150 1f387c752306f6163dcf0bf151a975ce 312 Gene3D G3DSA:3.30.200.20 2 86 4.9E-22 T 22-04-2016 SMGD1_RS05150 1f387c752306f6163dcf0bf151a975ce 312 SUPERFAMILY SSF56112 4 306 3.8E-48 T 22-04-2016 IPR011009 Protein kinase-like domain SMGD1_RS05150 1f387c752306f6163dcf0bf151a975ce 312 PANTHER PTHR33540 6 310 4.3E-75 T 22-04-2016 SMGD1_RS01670 b7bd64ca4af90e2f2e13babfb7b17603 397 SUPERFAMILY SSF160996 179 341 5.36E-33 T 22-04-2016 SMGD1_RS01670 b7bd64ca4af90e2f2e13babfb7b17603 397 Gene3D G3DSA:3.50.50.60 340 396 5.9E-37 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS01670 b7bd64ca4af90e2f2e13babfb7b17603 397 Gene3D G3DSA:3.50.50.60 2 176 5.9E-37 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS01670 b7bd64ca4af90e2f2e13babfb7b17603 397 Pfam PF03486 HI0933-like protein 5 393 5.9E-105 T 22-04-2016 SMGD1_RS01670 b7bd64ca4af90e2f2e13babfb7b17603 397 PANTHER PTHR10617:SF103 331 395 3.6E-74 T 22-04-2016 SMGD1_RS01670 b7bd64ca4af90e2f2e13babfb7b17603 397 PANTHER PTHR10617:SF103 1 286 3.6E-74 T 22-04-2016 SMGD1_RS01670 b7bd64ca4af90e2f2e13babfb7b17603 397 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 6 393 2.1E-128 T 22-04-2016 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like SMGD1_RS01670 b7bd64ca4af90e2f2e13babfb7b17603 397 SUPERFAMILY SSF51905 338 395 7.08E-43 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS01670 b7bd64ca4af90e2f2e13babfb7b17603 397 SUPERFAMILY SSF51905 1 178 7.08E-43 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS01670 b7bd64ca4af90e2f2e13babfb7b17603 397 Gene3D G3DSA:2.40.30.10 178 269 8.1E-14 T 22-04-2016 SMGD1_RS01670 b7bd64ca4af90e2f2e13babfb7b17603 397 PANTHER PTHR10617 331 395 3.6E-74 T 22-04-2016 SMGD1_RS01670 b7bd64ca4af90e2f2e13babfb7b17603 397 PANTHER PTHR10617 1 286 3.6E-74 T 22-04-2016 SMGD1_RS11865 b2f049082eb8eddfa1ff09c321067f0f 807 Gene3D G3DSA:3.50.50.60 1 96 1.5E-20 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS11865 b2f049082eb8eddfa1ff09c321067f0f 807 SUPERFAMILY SSF51905 230 298 5.11E-23 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS11865 b2f049082eb8eddfa1ff09c321067f0f 807 SUPERFAMILY SSF51905 1 150 5.11E-23 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS11865 b2f049082eb8eddfa1ff09c321067f0f 807 SUPERFAMILY SSF56770 535 795 3.79E-80 T 22-04-2016 SMGD1_RS11865 b2f049082eb8eddfa1ff09c321067f0f 807 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 548 695 7.2E-29 T 22-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 SMGD1_RS11865 b2f049082eb8eddfa1ff09c321067f0f 807 Pfam PF04324 BFD-like [2Fe-2S] binding domain 396 445 3.8E-9 T 22-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain SMGD1_RS11865 b2f049082eb8eddfa1ff09c321067f0f 807 Gene3D G3DSA:4.10.480.10 715 795 6.6E-33 T 22-04-2016 IPR027394 Cytochrome-c3 hydrogenase, C-terminal SMGD1_RS11865 b2f049082eb8eddfa1ff09c321067f0f 807 SUPERFAMILY SSF51905 131 211 5.44E-7 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS11865 b2f049082eb8eddfa1ff09c321067f0f 807 Gene3D G3DSA:3.40.50.700 536 713 1.0E-50 T 22-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 SMGD1_RS11865 b2f049082eb8eddfa1ff09c321067f0f 807 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 2 280 2.0E-37 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS11865 b2f049082eb8eddfa1ff09c321067f0f 807 Gene3D G3DSA:3.50.50.60 97 297 1.1E-26 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS11865 b2f049082eb8eddfa1ff09c321067f0f 807 Pfam PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal 715 794 3.2E-28 T 22-04-2016 IPR027394 Cytochrome-c3 hydrogenase, C-terminal SMGD1_RS11865 b2f049082eb8eddfa1ff09c321067f0f 807 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 647 671 1.2E-63 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SMGD1_RS11865 b2f049082eb8eddfa1ff09c321067f0f 807 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 676 699 1.2E-63 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SMGD1_RS11865 b2f049082eb8eddfa1ff09c321067f0f 807 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 556 580 1.2E-63 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SMGD1_RS11865 b2f049082eb8eddfa1ff09c321067f0f 807 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 702 719 1.2E-63 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SMGD1_RS11865 b2f049082eb8eddfa1ff09c321067f0f 807 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 533 555 1.2E-63 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SMGD1_RS11865 b2f049082eb8eddfa1ff09c321067f0f 807 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 772 785 1.2E-63 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SMGD1_RS11865 b2f049082eb8eddfa1ff09c321067f0f 807 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 720 738 1.2E-63 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SMGD1_RS11865 b2f049082eb8eddfa1ff09c321067f0f 807 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 744 770 1.2E-63 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SMGD1_RS11865 b2f049082eb8eddfa1ff09c321067f0f 807 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 602 625 1.2E-63 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SMGD1_RS11865 b2f049082eb8eddfa1ff09c321067f0f 807 PANTHER PTHR30013:SF7 487 792 2.0E-129 T 22-04-2016 SMGD1_RS11865 b2f049082eb8eddfa1ff09c321067f0f 807 PANTHER PTHR30013 487 792 2.0E-129 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SMGD1_RS11865 b2f049082eb8eddfa1ff09c321067f0f 807 TIGRFAM TIGR00391 hydA: hydrogenase (NiFe) small subunit (hydA) 491 796 6.1E-108 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SMGD1_RS13770 7e10e502117a2180fab969b53b558f33 205 Gene3D G3DSA:3.90.850.10 13 186 1.5E-40 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 SMGD1_RS13770 7e10e502117a2180fab969b53b558f33 205 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 16 181 2.4E-22 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 SMGD1_RS13770 7e10e502117a2180fab969b53b558f33 205 PANTHER PTHR11820 12 182 2.9E-42 T 22-04-2016 SMGD1_RS13770 7e10e502117a2180fab969b53b558f33 205 SUPERFAMILY SSF56529 13 188 2.35E-41 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 SMGD1_RS13770 7e10e502117a2180fab969b53b558f33 205 PANTHER PTHR11820:SF7 12 182 2.9E-42 T 22-04-2016 SMGD1_RS06680 a6d3f95244522fe828ff5b5c99ff11a0 301 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 1 301 70.255 T 22-04-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 SMGD1_RS06680 a6d3f95244522fe828ff5b5c99ff11a0 301 PANTHER PTHR34308:SF1 1 296 5.3E-72 T 22-04-2016 SMGD1_RS06680 a6d3f95244522fe828ff5b5c99ff11a0 301 TIGRFAM TIGR00380 cobD: cobalamin biosynthesis protein CobD 1 296 3.5E-64 T 22-04-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 SMGD1_RS06680 a6d3f95244522fe828ff5b5c99ff11a0 301 PANTHER PTHR34308 1 296 5.3E-72 T 22-04-2016 SMGD1_RS06680 a6d3f95244522fe828ff5b5c99ff11a0 301 Pfam PF03186 CobD/Cbib protein 8 279 1.9E-84 T 22-04-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 SMGD1_RS06370 c2db72a4d71e0ae5eaf7a7de8d3438b0 275 Pfam PF02511 Thymidylate synthase complementing protein 23 264 2.5E-45 T 22-04-2016 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|KEGG: 00670+2.1.1.148|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6545|MetaCyc: PWY-6936|MetaCyc: PWY-702 SMGD1_RS06370 c2db72a4d71e0ae5eaf7a7de8d3438b0 275 SUPERFAMILY SSF69796 186 262 2.35E-31 T 22-04-2016 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|KEGG: 00670+2.1.1.148|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6545|MetaCyc: PWY-6936|MetaCyc: PWY-702 SMGD1_RS06370 c2db72a4d71e0ae5eaf7a7de8d3438b0 275 SUPERFAMILY SSF69796 15 152 2.35E-31 T 22-04-2016 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|KEGG: 00670+2.1.1.148|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6545|MetaCyc: PWY-6936|MetaCyc: PWY-702 SMGD1_RS00410 b30e0896b6d4a1a92bc9652924b4ef7a 180 Gene3D G3DSA:3.40.50.150 36 170 5.5E-17 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS00410 b30e0896b6d4a1a92bc9652924b4ef7a 180 Pfam PF13489 Methyltransferase domain 34 169 2.3E-24 T 22-04-2016 SMGD1_RS00410 b30e0896b6d4a1a92bc9652924b4ef7a 180 SUPERFAMILY SSF53335 36 170 2.29E-22 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS03280 4b2e045c04d080f20109455e36434101 75 Gene3D G3DSA:1.10.1200.10 3 75 4.7E-32 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain SMGD1_RS03280 4b2e045c04d080f20109455e36434101 75 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 2 75 5.7E-34 T 22-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 SMGD1_RS03280 4b2e045c04d080f20109455e36434101 75 Hamap MF_01217 Acyl carrier protein [acpP]. 2 75 20.549 T 22-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 SMGD1_RS03280 4b2e045c04d080f20109455e36434101 75 ProSitePatterns PS00012 Phosphopantetheine attachment site. 31 46 - T 22-04-2016 IPR006162 Phosphopantetheine attachment site SMGD1_RS03280 4b2e045c04d080f20109455e36434101 75 PANTHER PTHR20863 4 75 1.3E-28 T 22-04-2016 SMGD1_RS03280 4b2e045c04d080f20109455e36434101 75 Pfam PF00550 Phosphopantetheine attachment site 6 72 5.2E-17 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain SMGD1_RS03280 4b2e045c04d080f20109455e36434101 75 SUPERFAMILY SSF47336 3 75 3.8E-23 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain SMGD1_RS03280 4b2e045c04d080f20109455e36434101 75 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 40 75 4.0E-11 T 22-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 SMGD1_RS00255 bee70fbd8f852898c974c4c1b6d2ffa8 597 Gene3D G3DSA:3.40.30.10 488 597 5.2E-33 T 22-04-2016 IPR012336 Thioredoxin-like fold SMGD1_RS00255 bee70fbd8f852898c974c4c1b6d2ffa8 597 Gene3D G3DSA:2.60.40.1250 14 135 4.6E-22 T 22-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain SMGD1_RS00255 bee70fbd8f852898c974c4c1b6d2ffa8 597 ProSitePatterns PS00194 Thioredoxin family active site. 506 524 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 SMGD1_RS00255 bee70fbd8f852898c974c4c1b6d2ffa8 597 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 196 398 1.2E-13 T 22-04-2016 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 SMGD1_RS00255 bee70fbd8f852898c974c4c1b6d2ffa8 597 Pfam PF13098 Thioredoxin-like domain 500 593 1.8E-12 T 22-04-2016 IPR012336 Thioredoxin-like fold SMGD1_RS00255 bee70fbd8f852898c974c4c1b6d2ffa8 597 SUPERFAMILY SSF74863 18 134 1.57E-18 T 22-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain SMGD1_RS00255 bee70fbd8f852898c974c4c1b6d2ffa8 597 PANTHER PTHR32234 20 122 2.7E-130 T 22-04-2016 SMGD1_RS00255 bee70fbd8f852898c974c4c1b6d2ffa8 597 PANTHER PTHR32234 145 597 2.7E-130 T 22-04-2016 SMGD1_RS00255 bee70fbd8f852898c974c4c1b6d2ffa8 597 SUPERFAMILY SSF52833 482 596 3.29E-26 T 22-04-2016 IPR012336 Thioredoxin-like fold SMGD1_RS00255 bee70fbd8f852898c974c4c1b6d2ffa8 597 Pfam PF11412 Disulphide bond corrector protein DsbC 19 133 6.1E-18 T 22-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain SMGD1_RS00255 bee70fbd8f852898c974c4c1b6d2ffa8 597 PANTHER PTHR32234:SF0 20 122 2.7E-130 T 22-04-2016 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 SMGD1_RS00255 bee70fbd8f852898c974c4c1b6d2ffa8 597 PANTHER PTHR32234:SF0 145 597 2.7E-130 T 22-04-2016 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 SMGD1_RS11075 c0505a84d3e390d1bc693c0bdd0d0038 201 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 146 160 5.2E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMGD1_RS11075 c0505a84d3e390d1bc693c0bdd0d0038 201 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 160 176 5.2E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMGD1_RS11075 c0505a84d3e390d1bc693c0bdd0d0038 201 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 176 188 5.2E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMGD1_RS11075 c0505a84d3e390d1bc693c0bdd0d0038 201 SMART SM00421 143 200 2.9E-17 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMGD1_RS11075 c0505a84d3e390d1bc693c0bdd0d0038 201 ProSitePatterns PS00622 LuxR-type HTH domain signature. 160 187 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMGD1_RS11075 c0505a84d3e390d1bc693c0bdd0d0038 201 Pfam PF00196 Bacterial regulatory proteins, luxR family 145 199 1.2E-15 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMGD1_RS11075 c0505a84d3e390d1bc693c0bdd0d0038 201 SUPERFAMILY SSF46894 137 199 6.8E-17 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SMGD1_RS11075 c0505a84d3e390d1bc693c0bdd0d0038 201 PANTHER PTHR26402 105 199 1.2E-15 T 22-04-2016 SMGD1_RS11075 c0505a84d3e390d1bc693c0bdd0d0038 201 PANTHER PTHR26402:SF151 105 199 1.2E-15 T 22-04-2016 SMGD1_RS11075 c0505a84d3e390d1bc693c0bdd0d0038 201 Gene3D G3DSA:1.10.10.10 106 199 9.8E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMGD1_RS12855 125ed4bc6301c3f18a1bb3b250a499fe 244 SUPERFAMILY SSF89946 117 241 5.75E-19 T 22-04-2016 IPR009671 Regulator of ribonuclease activity B domain SMGD1_RS12855 125ed4bc6301c3f18a1bb3b250a499fe 244 Pfam PF05117 Family of unknown function (DUF695) 10 125 3.8E-10 T 22-04-2016 IPR016097 Domain of unknown function DUF695 SMGD1_RS12855 125ed4bc6301c3f18a1bb3b250a499fe 244 Gene3D G3DSA:3.30.70.970 117 241 1.3E-15 T 22-04-2016 IPR009671 Regulator of ribonuclease activity B domain SMGD1_RS12855 125ed4bc6301c3f18a1bb3b250a499fe 244 Pfam PF06877 Regulator of ribonuclease activity B 135 232 7.9E-14 T 22-04-2016 IPR009671 Regulator of ribonuclease activity B domain SMGD1_RS12595 5ae744c6b22adc1b2fa45d6e13284a51 760 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 327 494 2.4E-47 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS12595 5ae744c6b22adc1b2fa45d6e13284a51 760 SMART SM00052 506 749 4.7E-100 T 22-04-2016 IPR001633 EAL domain SMGD1_RS12595 5ae744c6b22adc1b2fa45d6e13284a51 760 Pfam PF00990 Diguanylate cyclase, GGDEF domain 330 492 6.1E-53 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS12595 5ae744c6b22adc1b2fa45d6e13284a51 760 Gene3D G3DSA:3.30.450.20 200 317 1.3E-15 T 22-04-2016 SMGD1_RS12595 5ae744c6b22adc1b2fa45d6e13284a51 760 SUPERFAMILY SSF55073 335 498 2.51E-49 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS12595 5ae744c6b22adc1b2fa45d6e13284a51 760 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 207 325 6.0E-9 T 22-04-2016 IPR000014 PAS domain SMGD1_RS12595 5ae744c6b22adc1b2fa45d6e13284a51 760 SUPERFAMILY SSF55785 200 317 2.47E-13 T 22-04-2016 IPR000014 PAS domain SMGD1_RS12595 5ae744c6b22adc1b2fa45d6e13284a51 760 SMART SM00267 319 496 7.4E-67 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS12595 5ae744c6b22adc1b2fa45d6e13284a51 760 PANTHER PTHR10799 363 586 1.2E-73 T 22-04-2016 SMGD1_RS12595 5ae744c6b22adc1b2fa45d6e13284a51 760 PANTHER PTHR10799 713 732 1.2E-73 T 22-04-2016 SMGD1_RS12595 5ae744c6b22adc1b2fa45d6e13284a51 760 PANTHER PTHR10799 23 171 1.2E-73 T 22-04-2016 SMGD1_RS12595 5ae744c6b22adc1b2fa45d6e13284a51 760 Pfam PF08448 PAS fold 217 319 4.9E-8 T 22-04-2016 IPR013656 PAS fold-4 SMGD1_RS12595 5ae744c6b22adc1b2fa45d6e13284a51 760 Gene3D G3DSA:3.20.20.450 511 757 1.4E-93 T 22-04-2016 IPR001633 EAL domain SMGD1_RS12595 5ae744c6b22adc1b2fa45d6e13284a51 760 SUPERFAMILY SSF141868 512 756 1.96E-86 T 22-04-2016 IPR001633 EAL domain SMGD1_RS12595 5ae744c6b22adc1b2fa45d6e13284a51 760 PANTHER PTHR10799:SF774 363 586 1.2E-73 T 22-04-2016 SMGD1_RS12595 5ae744c6b22adc1b2fa45d6e13284a51 760 PANTHER PTHR10799:SF774 713 732 1.2E-73 T 22-04-2016 SMGD1_RS12595 5ae744c6b22adc1b2fa45d6e13284a51 760 PANTHER PTHR10799:SF774 23 171 1.2E-73 T 22-04-2016 SMGD1_RS12595 5ae744c6b22adc1b2fa45d6e13284a51 760 Gene3D G3DSA:3.30.70.270 332 504 8.3E-57 T 22-04-2016 SMGD1_RS12595 5ae744c6b22adc1b2fa45d6e13284a51 760 Pfam PF00563 EAL domain 513 743 9.7E-74 T 22-04-2016 IPR001633 EAL domain SMGD1_RS10025 c5e3836130a8fd292bb48c59fc283856 427 SMART SM00267 255 425 3.0E-48 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS10025 c5e3836130a8fd292bb48c59fc283856 427 SUPERFAMILY SSF55073 271 425 2.67E-42 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS10025 c5e3836130a8fd292bb48c59fc283856 427 Gene3D G3DSA:3.30.70.270 268 424 6.4E-47 T 22-04-2016 SMGD1_RS10025 c5e3836130a8fd292bb48c59fc283856 427 SUPERFAMILY SSF52172 4 132 8.82E-9 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS10025 c5e3836130a8fd292bb48c59fc283856 427 SMART SM00448 134 249 6.1E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS10025 c5e3836130a8fd292bb48c59fc283856 427 Gene3D G3DSA:3.40.50.2300 3 132 8.9E-10 T 22-04-2016 SMGD1_RS10025 c5e3836130a8fd292bb48c59fc283856 427 PANTHER PTHR26402 134 249 4.3E-27 T 22-04-2016 SMGD1_RS10025 c5e3836130a8fd292bb48c59fc283856 427 Gene3D G3DSA:3.40.50.2300 135 261 2.6E-29 T 22-04-2016 SMGD1_RS10025 c5e3836130a8fd292bb48c59fc283856 427 SUPERFAMILY SSF52172 135 268 5.69E-29 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS10025 c5e3836130a8fd292bb48c59fc283856 427 Pfam PF00072 Response regulator receiver domain 137 249 3.6E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS10025 c5e3836130a8fd292bb48c59fc283856 427 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 265 424 9.0E-46 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS10025 c5e3836130a8fd292bb48c59fc283856 427 Pfam PF00990 Diguanylate cyclase, GGDEF domain 266 421 4.5E-40 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS09390 9388851edaf3515e322ae3e9db431843 443 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 281 440 1.0E-45 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS09390 9388851edaf3515e322ae3e9db431843 443 SUPERFAMILY SSF54631 6 119 1.89E-14 T 22-04-2016 SMGD1_RS09390 9388851edaf3515e322ae3e9db431843 443 SMART SM00116 141 188 2.9 T 22-04-2016 IPR000644 CBS domain SMGD1_RS09390 9388851edaf3515e322ae3e9db431843 443 SMART SM00116 204 252 0.0019 T 22-04-2016 IPR000644 CBS domain SMGD1_RS09390 9388851edaf3515e322ae3e9db431843 443 SMART SM00116 13 62 33.0 T 22-04-2016 IPR000644 CBS domain SMGD1_RS09390 9388851edaf3515e322ae3e9db431843 443 SMART SM00116 75 122 1.8 T 22-04-2016 IPR000644 CBS domain SMGD1_RS09390 9388851edaf3515e322ae3e9db431843 443 Pfam PF00571 CBS domain 144 188 0.0069 T 22-04-2016 IPR000644 CBS domain SMGD1_RS09390 9388851edaf3515e322ae3e9db431843 443 Pfam PF00571 CBS domain 197 249 5.6E-9 T 22-04-2016 IPR000644 CBS domain SMGD1_RS09390 9388851edaf3515e322ae3e9db431843 443 Pfam PF00571 CBS domain 75 120 7.6E-5 T 22-04-2016 IPR000644 CBS domain SMGD1_RS09390 9388851edaf3515e322ae3e9db431843 443 SMART SM00267 273 441 8.0E-51 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS09390 9388851edaf3515e322ae3e9db431843 443 Gene3D G3DSA:3.30.70.270 286 440 2.5E-45 T 22-04-2016 SMGD1_RS09390 9388851edaf3515e322ae3e9db431843 443 PANTHER PTHR10799 5 40 2.0E-24 T 22-04-2016 SMGD1_RS09390 9388851edaf3515e322ae3e9db431843 443 PANTHER PTHR10799 317 438 2.0E-24 T 22-04-2016 SMGD1_RS09390 9388851edaf3515e322ae3e9db431843 443 Gene3D G3DSA:3.10.580.10 5 119 1.2E-11 T 22-04-2016 SMGD1_RS09390 9388851edaf3515e322ae3e9db431843 443 SUPERFAMILY SSF55073 289 439 5.1E-43 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS09390 9388851edaf3515e322ae3e9db431843 443 PANTHER PTHR10799:SF750 5 40 2.0E-24 T 22-04-2016 SMGD1_RS09390 9388851edaf3515e322ae3e9db431843 443 PANTHER PTHR10799:SF750 317 438 2.0E-24 T 22-04-2016 SMGD1_RS09390 9388851edaf3515e322ae3e9db431843 443 SUPERFAMILY SSF54631 129 261 1.01E-19 T 22-04-2016 SMGD1_RS09390 9388851edaf3515e322ae3e9db431843 443 Pfam PF00990 Diguanylate cyclase, GGDEF domain 284 436 2.4E-40 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS09390 9388851edaf3515e322ae3e9db431843 443 Gene3D G3DSA:3.10.580.10 131 248 5.5E-23 T 22-04-2016 SMGD1_RS06905 373ef67ec20432ec6ddf9f9476faddb9 375 SUPERFAMILY SSF53901 194 372 6.58E-33 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SMGD1_RS06905 373ef67ec20432ec6ddf9f9476faddb9 375 Gene3D G3DSA:3.40.47.10 234 372 1.3E-31 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SMGD1_RS06905 373ef67ec20432ec6ddf9f9476faddb9 375 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 78 219 2.2E-17 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal SMGD1_RS06905 373ef67ec20432ec6ddf9f9476faddb9 375 SMART SM00825 Beta-ketoacyl synthase 38 373 8.9E-5 T 22-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain SMGD1_RS06905 373ef67ec20432ec6ddf9f9476faddb9 375 PANTHER PTHR11712:SF277 52 372 9.9E-33 T 22-04-2016 SMGD1_RS06905 373ef67ec20432ec6ddf9f9476faddb9 375 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 230 332 1.4E-20 T 22-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal SMGD1_RS06905 373ef67ec20432ec6ddf9f9476faddb9 375 SUPERFAMILY SSF53901 70 217 4.51E-21 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SMGD1_RS06905 373ef67ec20432ec6ddf9f9476faddb9 375 Gene3D G3DSA:3.40.47.10 58 219 2.1E-25 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SMGD1_RS06905 373ef67ec20432ec6ddf9f9476faddb9 375 PANTHER PTHR11712 52 372 9.9E-33 T 22-04-2016 SMGD1_RS07065 5de12c151556a38625714679b3543ea9 546 Gene3D G3DSA:2.140.10.20 243 536 1.1E-66 T 22-04-2016 IPR003143 Cytochrome cd1-nitrite reductase, C-terminal domain SMGD1_RS07065 5de12c151556a38625714679b3543ea9 546 SUPERFAMILY SSF46626 6 103 1.36E-16 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS07065 5de12c151556a38625714679b3543ea9 546 Gene3D G3DSA:1.10.760.10 18 92 9.6E-18 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS07065 5de12c151556a38625714679b3543ea9 546 SUPERFAMILY SSF51004 111 535 1.57E-59 T 22-04-2016 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain SMGD1_RS07065 5de12c151556a38625714679b3543ea9 546 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 29 98 1.4E-10 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS07065 5de12c151556a38625714679b3543ea9 546 Pfam PF02239 Cytochrome D1 heme domain 141 536 2.3E-57 T 22-04-2016 SMGD1_RS07065 5de12c151556a38625714679b3543ea9 546 Gene3D G3DSA:2.130.10.10 93 242 4.4E-6 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 SMGD1_RS13130 9b830a9f8f59e0f3bc6ce895f077e8cb 184 Gene3D G3DSA:3.40.50.1820 2 169 4.4E-13 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SMGD1_RS13130 9b830a9f8f59e0f3bc6ce895f077e8cb 184 PANTHER PTHR35602:SF1 1 168 3.2E-55 T 22-04-2016 SMGD1_RS13130 9b830a9f8f59e0f3bc6ce895f077e8cb 184 SUPERFAMILY SSF53474 2 176 1.77E-15 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SMGD1_RS13130 9b830a9f8f59e0f3bc6ce895f077e8cb 184 PANTHER PTHR35602 1 168 3.2E-55 T 22-04-2016 SMGD1_RS13130 9b830a9f8f59e0f3bc6ce895f077e8cb 184 Pfam PF05728 Uncharacterised protein family (UPF0227) 1 182 1.6E-39 T 22-04-2016 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA SMGD1_RS11175 0b68f9a7ebf899926462f9af93929cdb 331 Gene3D G3DSA:2.40.128.140 7 329 3.7E-71 T 22-04-2016 SMGD1_RS11175 0b68f9a7ebf899926462f9af93929cdb 331 Pfam PF09982 Uncharacterized protein conserved in bacteria (DUF2219) 24 329 7.1E-66 T 22-04-2016 IPR018707 Protein of unknown function DUF2219 SMGD1_RS04750 1d7a96ac09dbf8e7415b21dc1a46229b 314 PANTHER PTHR34184:SF2 1 314 3.7E-139 T 22-04-2016 SMGD1_RS04750 1d7a96ac09dbf8e7415b21dc1a46229b 314 Pfam PF03773 Predicted permease 19 312 3.1E-68 T 22-04-2016 IPR005524 Predicted permease DUF318 SMGD1_RS04750 1d7a96ac09dbf8e7415b21dc1a46229b 314 PANTHER PTHR34184 1 314 3.7E-139 T 22-04-2016 SMGD1_RS04885 ab215fdeed531e6ae4b404cea085f962 76 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 5 75 6.0E-25 T 22-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS04885 ab215fdeed531e6ae4b404cea085f962 76 SUPERFAMILY SSF50104 2 74 1.62E-23 T 22-04-2016 IPR008991 Translation protein SH3-like domain SMGD1_RS04885 ab215fdeed531e6ae4b404cea085f962 76 Gene3D G3DSA:2.30.30.30 3 75 2.6E-20 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 SMGD1_RS04885 ab215fdeed531e6ae4b404cea085f962 76 ProSitePatterns PS01108 Ribosomal protein L24 signature. 9 26 - T 22-04-2016 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS04885 ab215fdeed531e6ae4b404cea085f962 76 SMART SM00739 5 32 1.2E-6 T 22-04-2016 IPR005824 KOW SMGD1_RS04885 ab215fdeed531e6ae4b404cea085f962 76 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 42 74 7.6E-8 T 22-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS04885 ab215fdeed531e6ae4b404cea085f962 76 Pfam PF00467 KOW motif 8 39 5.9E-8 T 22-04-2016 IPR005824 KOW SMGD1_RS04885 ab215fdeed531e6ae4b404cea085f962 76 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 4 73 13.546 T 22-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS04885 ab215fdeed531e6ae4b404cea085f962 76 PANTHER PTHR12903 1 72 4.0E-23 T 22-04-2016 SMGD1_RS02160 9b5f244c76381079717d5da746aa0124 649 PANTHER PTHR24095 24 644 3.9E-274 T 22-04-2016 SMGD1_RS02160 9b5f244c76381079717d5da746aa0124 649 Gene3D G3DSA:3.30.300.30 519 627 8.5E-25 T 22-04-2016 SMGD1_RS02160 9b5f244c76381079717d5da746aa0124 649 Pfam PF00501 AMP-binding enzyme 83 524 5.3E-94 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 SMGD1_RS02160 9b5f244c76381079717d5da746aa0124 649 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 20 645 4.5E-292 T 22-04-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: REACT_13433 SMGD1_RS02160 9b5f244c76381079717d5da746aa0124 649 Gene3D G3DSA:3.40.50.980 263 422 9.6E-27 T 22-04-2016 SMGD1_RS02160 9b5f244c76381079717d5da746aa0124 649 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 2 648 49.299 T 22-04-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: REACT_13433 SMGD1_RS02160 9b5f244c76381079717d5da746aa0124 649 SUPERFAMILY SSF56801 11 644 4.71E-170 T 22-04-2016 SMGD1_RS02160 9b5f244c76381079717d5da746aa0124 649 Gene3D G3DSA:3.40.50.980 78 262 3.3E-42 T 22-04-2016 SMGD1_RS02160 9b5f244c76381079717d5da746aa0124 649 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 25 80 8.5E-20 T 22-04-2016 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 SMGD1_RS02160 9b5f244c76381079717d5da746aa0124 649 Gene3D G3DSA:2.30.38.10 435 515 4.5E-11 T 22-04-2016 SMGD1_RS02160 9b5f244c76381079717d5da746aa0124 649 Pfam PF13193 AMP-binding enzyme C-terminal domain 533 613 1.3E-20 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain SMGD1_RS02160 9b5f244c76381079717d5da746aa0124 649 ProSitePatterns PS00455 Putative AMP-binding domain signature. 258 269 - T 22-04-2016 IPR020845 AMP-binding, conserved site SMGD1_RS02160 9b5f244c76381079717d5da746aa0124 649 PANTHER PTHR24095:SF116 24 644 3.9E-274 T 22-04-2016 SMGD1_RS13000 b0532cd79d7f44f46daac1052953e0d9 663 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 502 662 8.4E-43 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS13000 b0532cd79d7f44f46daac1052953e0d9 663 SUPERFAMILY SSF158472 311 353 5.49E-6 T 22-04-2016 SMGD1_RS13000 b0532cd79d7f44f46daac1052953e0d9 663 Gene3D G3DSA:3.30.450.20 60 182 3.4E-4 T 22-04-2016 SMGD1_RS13000 b0532cd79d7f44f46daac1052953e0d9 663 SUPERFAMILY SSF103190 59 182 8.24E-9 T 22-04-2016 IPR029151 Periplasmic sensor domain-like SMGD1_RS13000 b0532cd79d7f44f46daac1052953e0d9 663 Pfam PF00990 Diguanylate cyclase, GGDEF domain 506 658 1.7E-39 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS13000 b0532cd79d7f44f46daac1052953e0d9 663 PANTHER PTHR10799 13 32 4.1E-22 T 22-04-2016 SMGD1_RS13000 b0532cd79d7f44f46daac1052953e0d9 663 PANTHER PTHR10799 289 313 4.1E-22 T 22-04-2016 SMGD1_RS13000 b0532cd79d7f44f46daac1052953e0d9 663 PANTHER PTHR10799 386 660 4.1E-22 T 22-04-2016 SMGD1_RS13000 b0532cd79d7f44f46daac1052953e0d9 663 SUPERFAMILY SSF55073 511 661 5.1E-42 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS13000 b0532cd79d7f44f46daac1052953e0d9 663 SMART SM00304 304 356 7.0E-5 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SMGD1_RS13000 b0532cd79d7f44f46daac1052953e0d9 663 Pfam PF14827 Double sensory domain of two-component sensor kinase 42 273 3.6E-46 T 22-04-2016 IPR029150 Double Cache domain 3 SMGD1_RS13000 b0532cd79d7f44f46daac1052953e0d9 663 Pfam PF00672 HAMP domain 285 352 4.0E-10 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SMGD1_RS13000 b0532cd79d7f44f46daac1052953e0d9 663 Gene3D G3DSA:3.30.450.20 376 493 6.2E-4 T 22-04-2016 SMGD1_RS13000 b0532cd79d7f44f46daac1052953e0d9 663 Gene3D G3DSA:3.30.70.270 508 662 1.4E-43 T 22-04-2016 SMGD1_RS13000 b0532cd79d7f44f46daac1052953e0d9 663 SMART SM00267 495 663 1.1E-50 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS13000 b0532cd79d7f44f46daac1052953e0d9 663 PANTHER PTHR10799:SF750 13 32 4.1E-22 T 22-04-2016 SMGD1_RS13000 b0532cd79d7f44f46daac1052953e0d9 663 PANTHER PTHR10799:SF750 289 313 4.1E-22 T 22-04-2016 SMGD1_RS13000 b0532cd79d7f44f46daac1052953e0d9 663 PANTHER PTHR10799:SF750 386 660 4.1E-22 T 22-04-2016 SMGD1_RS02390 4f528f24c74a53edb41d2c3112d85129 288 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 3 282 1.4E-92 T 22-04-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family SMGD1_RS02390 4f528f24c74a53edb41d2c3112d85129 288 PANTHER PTHR10491 1 287 5.3E-94 T 22-04-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family SMGD1_RS02390 4f528f24c74a53edb41d2c3112d85129 288 PANTHER PTHR10491:SF4 1 287 5.3E-94 T 22-04-2016 SMGD1_RS02390 4f528f24c74a53edb41d2c3112d85129 288 Gene3D G3DSA:3.90.25.10 216 269 9.8E-33 T 22-04-2016 SMGD1_RS02390 4f528f24c74a53edb41d2c3112d85129 288 Gene3D G3DSA:3.40.50.720 1 196 3.9E-33 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS02390 4f528f24c74a53edb41d2c3112d85129 288 SUPERFAMILY SSF51735 1 283 8.12E-94 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS02390 4f528f24c74a53edb41d2c3112d85129 288 Pfam PF04321 RmlD substrate binding domain 3 283 1.0E-99 T 22-04-2016 IPR029903 RmlD-like substrate binding domain SMGD1_RS11350 bc49b0dfe9b23aeb2dcd7c18bc26a5ea 255 PRINTS PR00474 Glutamate 5-kinase family signature 141 168 4.2E-45 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 SMGD1_RS11350 bc49b0dfe9b23aeb2dcd7c18bc26a5ea 255 PRINTS PR00474 Glutamate 5-kinase family signature 69 97 4.2E-45 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 SMGD1_RS11350 bc49b0dfe9b23aeb2dcd7c18bc26a5ea 255 PRINTS PR00474 Glutamate 5-kinase family signature 37 51 4.2E-45 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 SMGD1_RS11350 bc49b0dfe9b23aeb2dcd7c18bc26a5ea 255 PRINTS PR00474 Glutamate 5-kinase family signature 109 130 4.2E-45 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 SMGD1_RS11350 bc49b0dfe9b23aeb2dcd7c18bc26a5ea 255 PRINTS PR00474 Glutamate 5-kinase family signature 202 222 4.2E-45 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 SMGD1_RS11350 bc49b0dfe9b23aeb2dcd7c18bc26a5ea 255 TIGRFAM TIGR01027 proB: glutamate 5-kinase 2 252 7.4E-70 T 22-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 SMGD1_RS11350 bc49b0dfe9b23aeb2dcd7c18bc26a5ea 255 Hamap MF_00456 Glutamate 5-kinase [proB]. 2 253 29.876 T 22-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 SMGD1_RS11350 bc49b0dfe9b23aeb2dcd7c18bc26a5ea 255 ProSitePatterns PS00902 Glutamate 5-kinase signature. 200 217 - T 22-04-2016 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 SMGD1_RS11350 bc49b0dfe9b23aeb2dcd7c18bc26a5ea 255 PANTHER PTHR11063 1 250 2.8E-49 T 22-04-2016 SMGD1_RS11350 bc49b0dfe9b23aeb2dcd7c18bc26a5ea 255 Gene3D G3DSA:3.40.1160.10 1 252 2.8E-43 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SMGD1_RS11350 bc49b0dfe9b23aeb2dcd7c18bc26a5ea 255 Pfam PF00696 Amino acid kinase family 2 227 1.6E-36 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SMGD1_RS11350 bc49b0dfe9b23aeb2dcd7c18bc26a5ea 255 SUPERFAMILY SSF53633 2 252 1.27E-57 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SMGD1_RS11350 bc49b0dfe9b23aeb2dcd7c18bc26a5ea 255 PANTHER PTHR11063:SF6 1 250 2.8E-49 T 22-04-2016 SMGD1_RS11350 bc49b0dfe9b23aeb2dcd7c18bc26a5ea 255 PIRSF PIRSF000729 1 255 7.6E-76 T 22-04-2016 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 SMGD1_RS11680 03b65cc3fe50b3a9a31141ec92e87026 177 Gene3D G3DSA:3.30.70.1290 13 146 4.0E-12 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 SMGD1_RS11680 03b65cc3fe50b3a9a31141ec92e87026 177 SMART SM01321 10 143 6.8E-9 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 SMGD1_RS11680 03b65cc3fe50b3a9a31141ec92e87026 177 Pfam PF01797 Transposase IS200 like 12 142 2.2E-5 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 SMGD1_RS11680 03b65cc3fe50b3a9a31141ec92e87026 177 SUPERFAMILY SSF143422 7 149 3.01E-19 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 SMGD1_RS00240 743e2b593abbc463ee7b0872fdab6feb 303 PANTHER PTHR22604 3 301 1.2E-47 T 22-04-2016 SMGD1_RS00240 743e2b593abbc463ee7b0872fdab6feb 303 SUPERFAMILY SSF51735 3 172 1.51E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS00240 743e2b593abbc463ee7b0872fdab6feb 303 Gene3D G3DSA:3.30.360.10 161 233 7.6E-10 T 22-04-2016 SMGD1_RS00240 743e2b593abbc463ee7b0872fdab6feb 303 Gene3D G3DSA:3.30.360.10 266 300 7.6E-10 T 22-04-2016 SMGD1_RS00240 743e2b593abbc463ee7b0872fdab6feb 303 SUPERFAMILY SSF55347 134 222 8.07E-8 T 22-04-2016 SMGD1_RS00240 743e2b593abbc463ee7b0872fdab6feb 303 Gene3D G3DSA:3.40.50.720 3 160 2.1E-33 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS00240 743e2b593abbc463ee7b0872fdab6feb 303 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 3 114 9.4E-21 T 22-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 SMGD1_RS00240 743e2b593abbc463ee7b0872fdab6feb 303 PANTHER PTHR22604:SF14 3 301 1.2E-47 T 22-04-2016 SMGD1_RS03745 71d082bc53b915a591858202b7f227d4 441 PANTHER PTHR24423 12 22 1.7E-31 T 22-04-2016 SMGD1_RS03745 71d082bc53b915a591858202b7f227d4 441 PANTHER PTHR24423 216 438 1.7E-31 T 22-04-2016 SMGD1_RS03745 71d082bc53b915a591858202b7f227d4 441 SMART SM00387 329 440 2.2E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS03745 71d082bc53b915a591858202b7f227d4 441 Gene3D G3DSA:1.10.287.130 215 282 9.5E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS03745 71d082bc53b915a591858202b7f227d4 441 SUPERFAMILY SSF47384 206 284 8.44E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS03745 71d082bc53b915a591858202b7f227d4 441 SUPERFAMILY SSF55874 288 438 2.49E-30 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS03745 71d082bc53b915a591858202b7f227d4 441 PRINTS PR00344 Bacterial sensor protein C-terminal signature 424 437 3.1E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS03745 71d082bc53b915a591858202b7f227d4 441 PRINTS PR00344 Bacterial sensor protein C-terminal signature 388 398 3.1E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS03745 71d082bc53b915a591858202b7f227d4 441 PRINTS PR00344 Bacterial sensor protein C-terminal signature 370 384 3.1E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS03745 71d082bc53b915a591858202b7f227d4 441 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 418 3.1E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS03745 71d082bc53b915a591858202b7f227d4 441 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 333 438 1.5E-15 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS03745 71d082bc53b915a591858202b7f227d4 441 Gene3D G3DSA:3.30.565.10 290 438 1.8E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS03430 454ae47efe91f977fbca1d331a700331 88 Gene3D G3DSA:3.30.70.100 1 88 3.9E-23 T 22-04-2016 SMGD1_RS03430 454ae47efe91f977fbca1d331a700331 88 PANTHER PTHR10029 1 88 4.7E-13 T 22-04-2016 SMGD1_RS03430 454ae47efe91f977fbca1d331a700331 88 Pfam PF00708 Acylphosphatase 1 88 6.1E-22 T 22-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 SMGD1_RS03430 454ae47efe91f977fbca1d331a700331 88 SUPERFAMILY SSF54975 1 88 1.48E-19 T 22-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 SMGD1_RS03430 454ae47efe91f977fbca1d331a700331 88 PANTHER PTHR10029:SF3 1 88 4.7E-13 T 22-04-2016 SMGD1_RS00520 405d037d2951e1605f4cfdc4ec6f2398 571 SUPERFAMILY SSF82866 364 549 8.76E-33 T 22-04-2016 SMGD1_RS00520 405d037d2951e1605f4cfdc4ec6f2398 571 PANTHER PTHR32063 1 549 1.2E-92 T 22-04-2016 SMGD1_RS00520 405d037d2951e1605f4cfdc4ec6f2398 571 PANTHER PTHR32063:SF16 1 549 1.2E-92 T 22-04-2016 SMGD1_RS00520 405d037d2951e1605f4cfdc4ec6f2398 571 SUPERFAMILY SSF82693 54 167 4.39E-6 T 22-04-2016 SMGD1_RS00520 405d037d2951e1605f4cfdc4ec6f2398 571 Gene3D G3DSA:1.10.3850.10 372 549 3.5E-45 T 22-04-2016 SMGD1_RS00520 405d037d2951e1605f4cfdc4ec6f2398 571 Pfam PF00873 AcrB/AcrD/AcrF family 18 547 5.2E-39 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMGD1_RS00520 405d037d2951e1605f4cfdc4ec6f2398 571 Gene3D G3DSA:3.30.70.1430 58 166 1.9E-4 T 22-04-2016 SMGD1_RS06920 21bee957c619aeedfb0c84bbdb313e30 280 PANTHER PTHR24220 3 218 4.9E-84 T 22-04-2016 SMGD1_RS06920 21bee957c619aeedfb0c84bbdb313e30 280 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMGD1_RS06920 21bee957c619aeedfb0c84bbdb313e30 280 PANTHER PTHR24220:SF0 3 218 4.9E-84 T 22-04-2016 SMGD1_RS06920 21bee957c619aeedfb0c84bbdb313e30 280 Pfam PF00005 ABC transporter 17 156 1.8E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMGD1_RS06920 21bee957c619aeedfb0c84bbdb313e30 280 Gene3D G3DSA:3.40.50.300 1 222 7.3E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS06920 21bee957c619aeedfb0c84bbdb313e30 280 SUPERFAMILY SSF52540 2 219 4.49E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS06920 21bee957c619aeedfb0c84bbdb313e30 280 SMART SM00382 26 204 6.0E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain SMGD1_RS09640 b17238c9e2e1e00db5767c9f149f58d6 231 Pfam PF00929 Exonuclease 3 159 5.1E-17 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III SMGD1_RS09640 b17238c9e2e1e00db5767c9f149f58d6 231 SMART SM00479 1 168 2.7E-25 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III SMGD1_RS09640 b17238c9e2e1e00db5767c9f149f58d6 231 SUPERFAMILY SSF53098 2 216 4.49E-33 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMGD1_RS09640 b17238c9e2e1e00db5767c9f149f58d6 231 PANTHER PTHR30231 2 166 3.5E-21 T 22-04-2016 SMGD1_RS09640 b17238c9e2e1e00db5767c9f149f58d6 231 Gene3D G3DSA:3.30.420.10 2 171 1.3E-32 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMGD1_RS13415 3e007fd8924b99a71d60baa7b8645d21 652 SUPERFAMILY SSF50249 552 651 7.59E-31 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMGD1_RS13415 3e007fd8924b99a71d60baa7b8645d21 652 SUPERFAMILY SSF47323 348 505 5.42E-32 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMGD1_RS13415 3e007fd8924b99a71d60baa7b8645d21 652 PRINTS PR01041 Methionyl-tRNA synthetase signature 347 358 4.5E-33 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 SMGD1_RS13415 3e007fd8924b99a71d60baa7b8645d21 652 PRINTS PR01041 Methionyl-tRNA synthetase signature 255 270 4.5E-33 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 SMGD1_RS13415 3e007fd8924b99a71d60baa7b8645d21 652 PRINTS PR01041 Methionyl-tRNA synthetase signature 224 235 4.5E-33 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 SMGD1_RS13415 3e007fd8924b99a71d60baa7b8645d21 652 PRINTS PR01041 Methionyl-tRNA synthetase signature 37 51 4.5E-33 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 SMGD1_RS13415 3e007fd8924b99a71d60baa7b8645d21 652 PRINTS PR01041 Methionyl-tRNA synthetase signature 85 96 4.5E-33 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 SMGD1_RS13415 3e007fd8924b99a71d60baa7b8645d21 652 PRINTS PR01041 Methionyl-tRNA synthetase signature 5 18 4.5E-33 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 SMGD1_RS13415 3e007fd8924b99a71d60baa7b8645d21 652 Gene3D G3DSA:1.10.730.10 337 505 5.6E-38 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMGD1_RS13415 3e007fd8924b99a71d60baa7b8645d21 652 Gene3D G3DSA:3.40.50.620 4 111 2.6E-72 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMGD1_RS13415 3e007fd8924b99a71d60baa7b8645d21 652 Gene3D G3DSA:3.40.50.620 226 335 2.6E-72 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMGD1_RS13415 3e007fd8924b99a71d60baa7b8645d21 652 Hamap MF_01228 Methionine--tRNA ligase [metG]. 1 504 45.846 T 22-04-2016 IPR023457 Methionine-tRNA synthetase, type 2 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 SMGD1_RS13415 3e007fd8924b99a71d60baa7b8645d21 652 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 525 651 1.4E-38 T 22-04-2016 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 SMGD1_RS13415 3e007fd8924b99a71d60baa7b8645d21 652 Pfam PF09334 tRNA synthetases class I (M) 143 359 1.4E-64 T 22-04-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMGD1_RS13415 3e007fd8924b99a71d60baa7b8645d21 652 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 4 491 2.8E-155 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 SMGD1_RS13415 3e007fd8924b99a71d60baa7b8645d21 652 Pfam PF01588 Putative tRNA binding domain 557 649 3.4E-27 T 22-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 SMGD1_RS13415 3e007fd8924b99a71d60baa7b8645d21 652 Gene3D G3DSA:2.170.220.10 114 225 4.4E-43 T 22-04-2016 SMGD1_RS13415 3e007fd8924b99a71d60baa7b8645d21 652 Gene3D G3DSA:2.40.50.140 546 651 4.5E-35 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMGD1_RS13415 3e007fd8924b99a71d60baa7b8645d21 652 PANTHER PTHR11946:SF1 4 608 1.9E-248 T 22-04-2016 SMGD1_RS13415 3e007fd8924b99a71d60baa7b8645d21 652 PANTHER PTHR11946 4 608 1.9E-248 T 22-04-2016 SMGD1_RS13415 3e007fd8924b99a71d60baa7b8645d21 652 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 8 132 4.6E-13 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMGD1_RS13415 3e007fd8924b99a71d60baa7b8645d21 652 SUPERFAMILY SSF52374 4 347 1.82E-104 T 22-04-2016 SMGD1_RS09810 7d52dde57f7599ff7b735a42c3e766fe 636 Pfam PF00884 Sulfatase 274 555 8.7E-34 T 22-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 SMGD1_RS09810 7d52dde57f7599ff7b735a42c3e766fe 636 PANTHER PTHR10342 274 582 6.8E-44 T 22-04-2016 SMGD1_RS09810 7d52dde57f7599ff7b735a42c3e766fe 636 PANTHER PTHR10342:SF236 274 582 6.8E-44 T 22-04-2016 SMGD1_RS09810 7d52dde57f7599ff7b735a42c3e766fe 636 Gene3D G3DSA:3.40.720.10 274 567 3.9E-43 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 SMGD1_RS09810 7d52dde57f7599ff7b735a42c3e766fe 636 SUPERFAMILY SSF53649 273 579 1.28E-52 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 SMGD1_RS09810 7d52dde57f7599ff7b735a42c3e766fe 636 PIRSF PIRSF005091 3 636 2.6E-70 T 22-04-2016 IPR012160 Lipoteichoic acid synthase-like KEGG: 00440+2.7.8.-|KEGG: 00513+2.7.8.-|KEGG: 00540+2.7.8.-|KEGG: 00564+2.7.8.-|KEGG: 00600+2.7.8.-|KEGG: 00770+2.7.8.-|UniPathway: UPA00556 SMGD1_RS01040 e3d904e80fc2371f8e2450330ca3b1fd 293 Pfam PF13365 Trypsin-like peptidase domain 72 191 1.2E-11 T 22-04-2016 SMGD1_RS01040 e3d904e80fc2371f8e2450330ca3b1fd 293 Gene3D G3DSA:2.40.10.10 67 134 3.2E-11 T 22-04-2016 SMGD1_RS01040 e3d904e80fc2371f8e2450330ca3b1fd 293 Gene3D G3DSA:2.40.10.10 154 221 3.4E-11 T 22-04-2016 SMGD1_RS01040 e3d904e80fc2371f8e2450330ca3b1fd 293 SUPERFAMILY SSF50494 39 218 6.75E-23 T 22-04-2016 IPR009003 Peptidase S1, PA clan SMGD1_RS11460 c7ee8a98ac97cb1908f32a8d24ea537b 231 SUPERFAMILY SSF53167 1 226 2.62E-65 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SMGD1_RS11460 c7ee8a98ac97cb1908f32a8d24ea537b 231 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 2 228 6.4E-56 T 22-04-2016 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154|UniPathway: UPA00904 SMGD1_RS11460 c7ee8a98ac97cb1908f32a8d24ea537b 231 Gene3D G3DSA:3.40.50.1580 1 228 3.3E-71 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SMGD1_RS11460 c7ee8a98ac97cb1908f32a8d24ea537b 231 Pfam PF01048 Phosphorylase superfamily 2 226 2.4E-48 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SMGD1_RS11460 c7ee8a98ac97cb1908f32a8d24ea537b 231 PANTHER PTHR21234 1 231 1.7E-43 T 22-04-2016 IPR018017 Nucleoside phosphorylase SMGD1_RS11460 c7ee8a98ac97cb1908f32a8d24ea537b 231 PANTHER PTHR21234:SF16 1 231 1.7E-43 T 22-04-2016 SMGD1_RS08310 57a39cd93e802e04dcf1970f4d57c301 648 PANTHER PTHR24423:SF485 425 648 3.0E-35 T 22-04-2016 SMGD1_RS08310 57a39cd93e802e04dcf1970f4d57c301 648 Gene3D G3DSA:3.30.565.10 499 647 1.4E-30 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS08310 57a39cd93e802e04dcf1970f4d57c301 648 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 539 647 7.3E-15 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS08310 57a39cd93e802e04dcf1970f4d57c301 648 SUPERFAMILY SSF47384 423 496 8.83E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS08310 57a39cd93e802e04dcf1970f4d57c301 648 PANTHER PTHR24423 425 648 3.0E-35 T 22-04-2016 SMGD1_RS08310 57a39cd93e802e04dcf1970f4d57c301 648 Pfam PF07695 7TM diverse intracellular signalling 178 382 1.6E-37 T 22-04-2016 IPR011623 7TM-DISM receptor, extracellular domain, type 1 SMGD1_RS08310 57a39cd93e802e04dcf1970f4d57c301 648 PRINTS PR00344 Bacterial sensor protein C-terminal signature 633 646 1.1E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS08310 57a39cd93e802e04dcf1970f4d57c301 648 PRINTS PR00344 Bacterial sensor protein C-terminal signature 596 606 1.1E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS08310 57a39cd93e802e04dcf1970f4d57c301 648 PRINTS PR00344 Bacterial sensor protein C-terminal signature 578 592 1.1E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS08310 57a39cd93e802e04dcf1970f4d57c301 648 PRINTS PR00344 Bacterial sensor protein C-terminal signature 609 627 1.1E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS08310 57a39cd93e802e04dcf1970f4d57c301 648 Pfam PF07696 7TMR-DISM extracellular 2 33 165 8.5E-27 T 22-04-2016 IPR011622 7TM-DISM receptor, extracellular domain, type 2 SMGD1_RS08310 57a39cd93e802e04dcf1970f4d57c301 648 SUPERFAMILY SSF55874 497 647 2.75E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS08310 57a39cd93e802e04dcf1970f4d57c301 648 SMART SM00387 537 648 1.9E-13 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS12775 e9998d9c5af51b3697377421d7040538 144 PANTHER PTHR22924:SF15 1 142 9.6E-20 T 22-04-2016 SMGD1_RS12775 e9998d9c5af51b3697377421d7040538 144 SUPERFAMILY SSF46458 3 140 1.67E-27 T 22-04-2016 IPR009050 Globin-like SMGD1_RS12775 e9998d9c5af51b3697377421d7040538 144 PANTHER PTHR22924 1 142 9.6E-20 T 22-04-2016 SMGD1_RS12775 e9998d9c5af51b3697377421d7040538 144 Gene3D G3DSA:1.10.490.10 4 141 9.9E-37 T 22-04-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 SMGD1_RS06460 73c8f5fc9db7caab6b3766c993530bdb 705 SUPERFAMILY SSF117143 91 346 1.57E-25 T 22-04-2016 SMGD1_RS06460 73c8f5fc9db7caab6b3766c993530bdb 705 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 626 703 3.3E-18 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain SMGD1_RS06460 73c8f5fc9db7caab6b3766c993530bdb 705 PANTHER PTHR30435 582 704 9.2E-88 T 22-04-2016 SMGD1_RS06460 73c8f5fc9db7caab6b3766c993530bdb 705 PANTHER PTHR30435 1 137 9.2E-88 T 22-04-2016 SMGD1_RS06460 73c8f5fc9db7caab6b3766c993530bdb 705 Pfam PF07559 Flagellar basal body protein FlaE 465 585 2.2E-15 T 22-04-2016 IPR011491 Flagellar hook protein FlgE SMGD1_RS06460 73c8f5fc9db7caab6b3766c993530bdb 705 Pfam PF00460 Flagella basal body rod protein 8 35 5.1E-10 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 SMGD1_RS06460 73c8f5fc9db7caab6b3766c993530bdb 705 SUPERFAMILY SSF117143 399 665 7.98E-40 T 22-04-2016 SMGD1_RS06460 73c8f5fc9db7caab6b3766c993530bdb 705 TIGRFAM TIGR02489 flgE_epsilon: flagellar hook protein FlgE 1 704 2.3E-212 T 22-04-2016 IPR012835 Flagellar hook FlgE GO:0009288|GO:0044781 SMGD1_RS06460 73c8f5fc9db7caab6b3766c993530bdb 705 PANTHER PTHR30435:SF1 582 704 9.2E-88 T 22-04-2016 SMGD1_RS06460 73c8f5fc9db7caab6b3766c993530bdb 705 PANTHER PTHR30435:SF1 1 137 9.2E-88 T 22-04-2016 SMGD1_RS06460 73c8f5fc9db7caab6b3766c993530bdb 705 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 400 686 3.4E-43 T 22-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G SMGD1_RS06460 73c8f5fc9db7caab6b3766c993530bdb 705 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 347 4.8E-38 T 22-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G SMGD1_RS09605 e27a558e57a3efcb35c97758f88c3d79 512 SUPERFAMILY SSF53927 205 512 3.41E-103 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 SMGD1_RS09605 e27a558e57a3efcb35c97758f88c3d79 512 SMART SM00798 133 444 4.9E-138 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 SMGD1_RS09605 e27a558e57a3efcb35c97758f88c3d79 512 Pfam PF02142 MGS-like domain 14 127 1.1E-21 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain SMGD1_RS09605 e27a558e57a3efcb35c97758f88c3d79 512 SUPERFAMILY SSF52335 3 192 1.16E-63 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain SMGD1_RS09605 e27a558e57a3efcb35c97758f88c3d79 512 SMART SM00851 14 128 1.5E-45 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain SMGD1_RS09605 e27a558e57a3efcb35c97758f88c3d79 512 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 2 512 37.622 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 SMGD1_RS09605 e27a558e57a3efcb35c97758f88c3d79 512 Gene3D G3DSA:3.40.140.20 236 350 1.2E-35 T 22-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 SMGD1_RS09605 e27a558e57a3efcb35c97758f88c3d79 512 PANTHER PTHR11692 2 512 4.4E-225 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 SMGD1_RS09605 e27a558e57a3efcb35c97758f88c3d79 512 Pfam PF01808 AICARFT/IMPCHase bienzyme 133 443 1.3E-93 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 SMGD1_RS09605 e27a558e57a3efcb35c97758f88c3d79 512 Gene3D G3DSA:3.40.140.20 359 501 4.5E-45 T 22-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 SMGD1_RS09605 e27a558e57a3efcb35c97758f88c3d79 512 Gene3D G3DSA:3.40.50.1380 3 184 8.2E-73 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain SMGD1_RS09605 e27a558e57a3efcb35c97758f88c3d79 512 PANTHER PTHR11692:SF2 2 512 4.4E-225 T 22-04-2016 SMGD1_RS09605 e27a558e57a3efcb35c97758f88c3d79 512 PIRSF PIRSF000414 1 512 3.9E-183 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 SMGD1_RS05355 6c010d31438fb106b6196114e2ccf08e 601 SUPERFAMILY SSF52402 221 371 1.12E-58 T 22-04-2016 SMGD1_RS05355 6c010d31438fb106b6196114e2ccf08e 601 SUPERFAMILY SSF52402 458 590 1.12E-58 T 22-04-2016 SMGD1_RS05355 6c010d31438fb106b6196114e2ccf08e 601 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 538 2.8E-128 T 22-04-2016 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|UniPathway: UPA00134 SMGD1_RS05355 6c010d31438fb106b6196114e2ccf08e 601 Pfam PF13537 Glutamine amidotransferase domain 43 156 1.1E-36 T 22-04-2016 IPR017932 Glutamine amidotransferase type 2 domain SMGD1_RS05355 6c010d31438fb106b6196114e2ccf08e 601 PANTHER PTHR11772 450 541 7.1E-109 T 22-04-2016 SMGD1_RS05355 6c010d31438fb106b6196114e2ccf08e 601 PANTHER PTHR11772 2 373 7.1E-109 T 22-04-2016 SMGD1_RS05355 6c010d31438fb106b6196114e2ccf08e 601 PANTHER PTHR11772:SF10 450 541 7.1E-109 T 22-04-2016 SMGD1_RS05355 6c010d31438fb106b6196114e2ccf08e 601 PANTHER PTHR11772:SF10 2 373 7.1E-109 T 22-04-2016 SMGD1_RS05355 6c010d31438fb106b6196114e2ccf08e 601 Gene3D G3DSA:3.60.20.10 1 210 5.7E-63 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SMGD1_RS05355 6c010d31438fb106b6196114e2ccf08e 601 PIRSF PIRSF001589 1 601 1.6E-134 T 22-04-2016 SMGD1_RS05355 6c010d31438fb106b6196114e2ccf08e 601 Gene3D G3DSA:3.40.50.620 211 398 2.9E-71 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMGD1_RS05355 6c010d31438fb106b6196114e2ccf08e 601 Gene3D G3DSA:3.40.50.620 454 597 2.9E-71 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMGD1_RS05355 6c010d31438fb106b6196114e2ccf08e 601 SUPERFAMILY SSF56235 1 211 4.03E-54 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SMGD1_RS05355 6c010d31438fb106b6196114e2ccf08e 601 Pfam PF00733 Asparagine synthase 230 596 3.7E-75 T 22-04-2016 IPR001962 Asparagine synthase GO:0004066|GO:0006529 SMGD1_RS03270 b2d594d1cd3983ea6f6acf3117dddc36 311 SUPERFAMILY SSF52096 31 309 9.12E-82 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SMGD1_RS03270 b2d594d1cd3983ea6f6acf3117dddc36 311 PANTHER PTHR22855:SF42 6 311 1.3E-97 T 22-04-2016 SMGD1_RS03270 b2d594d1cd3983ea6f6acf3117dddc36 311 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 4 309 43.347 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SMGD1_RS03270 b2d594d1cd3983ea6f6acf3117dddc36 311 Gene3D G3DSA:3.90.226.10 52 261 1.7E-39 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SMGD1_RS03270 b2d594d1cd3983ea6f6acf3117dddc36 311 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 127 143 2.3E-42 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SMGD1_RS03270 b2d594d1cd3983ea6f6acf3117dddc36 311 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 106 124 2.3E-42 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SMGD1_RS03270 b2d594d1cd3983ea6f6acf3117dddc36 311 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 146 159 2.3E-42 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SMGD1_RS03270 b2d594d1cd3983ea6f6acf3117dddc36 311 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 190 199 2.3E-42 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SMGD1_RS03270 b2d594d1cd3983ea6f6acf3117dddc36 311 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 162 175 2.3E-42 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SMGD1_RS03270 b2d594d1cd3983ea6f6acf3117dddc36 311 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 81 92 2.3E-42 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SMGD1_RS03270 b2d594d1cd3983ea6f6acf3117dddc36 311 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 4 141 1.7E-48 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SMGD1_RS03270 b2d594d1cd3983ea6f6acf3117dddc36 311 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 309 3.1E-134 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SMGD1_RS03270 b2d594d1cd3983ea6f6acf3117dddc36 311 PANTHER PTHR22855 6 311 1.3E-97 T 22-04-2016 SMGD1_RS11540 fb54fdb89419b5ac34b6dde5f906036e 322 SUPERFAMILY SSF141523 65 197 1.44E-10 T 22-04-2016 SMGD1_RS11540 fb54fdb89419b5ac34b6dde5f906036e 322 SUPERFAMILY SSF54427 213 311 9.93E-9 T 22-04-2016 IPR032710 NTF2-like domain SMGD1_RS11540 fb54fdb89419b5ac34b6dde5f906036e 322 PANTHER PTHR36699 68 313 2.9E-15 T 22-04-2016 SMGD1_RS11540 fb54fdb89419b5ac34b6dde5f906036e 322 Pfam PF03734 L,D-transpeptidase catalytic domain 64 193 1.4E-10 T 22-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 SMGD1_RS11540 fb54fdb89419b5ac34b6dde5f906036e 322 Gene3D G3DSA:2.40.440.10 67 197 1.6E-8 T 22-04-2016 SMGD1_RS10835 bc1844af873eccecb969ec4723d3897c 486 Gene3D G3DSA:3.30.420.40 3 126 6.9E-37 T 22-04-2016 SMGD1_RS10835 bc1844af873eccecb969ec4723d3897c 486 PIRSF PIRSF001267 1 478 1.5E-87 T 22-04-2016 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40|UniPathway: UPA00908 SMGD1_RS10835 bc1844af873eccecb969ec4723d3897c 486 SUPERFAMILY SSF53067 130 294 1.3E-36 T 22-04-2016 SMGD1_RS10835 bc1844af873eccecb969ec4723d3897c 486 SUPERFAMILY SSF109604 322 460 3.14E-19 T 22-04-2016 SMGD1_RS10835 bc1844af873eccecb969ec4723d3897c 486 SUPERFAMILY SSF53067 4 128 1.62E-32 T 22-04-2016 SMGD1_RS10835 bc1844af873eccecb969ec4723d3897c 486 Pfam PF02541 Ppx/GppA phosphatase family 18 297 3.0E-64 T 22-04-2016 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40|UniPathway: UPA00908 SMGD1_RS10835 bc1844af873eccecb969ec4723d3897c 486 Gene3D G3DSA:3.30.420.150 130 296 1.1E-37 T 22-04-2016 SMGD1_RS10835 bc1844af873eccecb969ec4723d3897c 486 PANTHER PTHR30005 4 453 2.4E-79 T 22-04-2016 SMGD1_RS11565 2e05a9c5ac26776081743f7d865f31b7 245 SMART SM00450 147 245 7.6E-16 T 22-04-2016 IPR001763 Rhodanese-like domain SMGD1_RS11565 2e05a9c5ac26776081743f7d865f31b7 245 Pfam PF02943 Ferredoxin thioredoxin reductase catalytic beta chain 16 122 4.5E-33 T 22-04-2016 IPR004209 Ferredoxin thioredoxin reductase catalytic beta subunit GO:0016730|GO:0055114 SMGD1_RS11565 2e05a9c5ac26776081743f7d865f31b7 245 Gene3D G3DSA:3.40.250.10 138 241 1.4E-23 T 22-04-2016 IPR001763 Rhodanese-like domain SMGD1_RS11565 2e05a9c5ac26776081743f7d865f31b7 245 SUPERFAMILY SSF57662 14 125 1.7E-27 T 22-04-2016 IPR004209 Ferredoxin thioredoxin reductase catalytic beta subunit GO:0016730|GO:0055114 SMGD1_RS11565 2e05a9c5ac26776081743f7d865f31b7 245 Pfam PF00581 Rhodanese-like domain 161 239 2.2E-11 T 22-04-2016 IPR001763 Rhodanese-like domain SMGD1_RS11565 2e05a9c5ac26776081743f7d865f31b7 245 SUPERFAMILY SSF52821 139 239 3.54E-21 T 22-04-2016 IPR001763 Rhodanese-like domain SMGD1_RS11565 2e05a9c5ac26776081743f7d865f31b7 245 Gene3D G3DSA:3.90.460.10 8 124 5.8E-28 T 22-04-2016 IPR004209 Ferredoxin thioredoxin reductase catalytic beta subunit GO:0016730|GO:0055114 SMGD1_RS10340 64955f71dfd853e82db4d9aee07f6d1d 544 SUPERFAMILY SSF48592 6 133 1.3E-73 T 22-04-2016 SMGD1_RS10340 64955f71dfd853e82db4d9aee07f6d1d 544 SUPERFAMILY SSF48592 405 519 1.3E-73 T 22-04-2016 SMGD1_RS10340 64955f71dfd853e82db4d9aee07f6d1d 544 SUPERFAMILY SSF52029 184 375 1.15E-80 T 22-04-2016 IPR027409 GroEL-like apical domain SMGD1_RS10340 64955f71dfd853e82db4d9aee07f6d1d 544 Hamap MF_00600 60 kDa chaperonin [groL]. 1 543 40.047 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 SMGD1_RS10340 64955f71dfd853e82db4d9aee07f6d1d 544 Gene3D G3DSA:3.50.7.10 197 334 5.4E-67 T 22-04-2016 IPR027409 GroEL-like apical domain SMGD1_RS10340 64955f71dfd853e82db4d9aee07f6d1d 544 Gene3D G3DSA:1.10.560.10 335 516 1.7E-36 T 22-04-2016 IPR027413 GroEL-like equatorial domain SMGD1_RS10340 64955f71dfd853e82db4d9aee07f6d1d 544 Pfam PF00118 TCP-1/cpn60 chaperonin family 22 521 3.1E-95 T 22-04-2016 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 SMGD1_RS10340 64955f71dfd853e82db4d9aee07f6d1d 544 SUPERFAMILY SSF54849 137 203 5.04E-24 T 22-04-2016 SMGD1_RS10340 64955f71dfd853e82db4d9aee07f6d1d 544 Gene3D G3DSA:1.10.560.10 3 196 8.5E-46 T 22-04-2016 IPR027413 GroEL-like equatorial domain SMGD1_RS10340 64955f71dfd853e82db4d9aee07f6d1d 544 ProSitePatterns PS00296 Chaperonins cpn60 signature. 404 415 - T 22-04-2016 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 SMGD1_RS10340 64955f71dfd853e82db4d9aee07f6d1d 544 TIGRFAM TIGR02348 GroEL: chaperonin GroL 2 525 3.7E-248 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 SMGD1_RS10340 64955f71dfd853e82db4d9aee07f6d1d 544 PRINTS PR00298 60kDa chaperonin signature 397 418 6.9E-71 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 SMGD1_RS10340 64955f71dfd853e82db4d9aee07f6d1d 544 PRINTS PR00298 60kDa chaperonin signature 82 109 6.9E-71 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 SMGD1_RS10340 64955f71dfd853e82db4d9aee07f6d1d 544 PRINTS PR00298 60kDa chaperonin signature 349 374 6.9E-71 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 SMGD1_RS10340 64955f71dfd853e82db4d9aee07f6d1d 544 PRINTS PR00298 60kDa chaperonin signature 26 52 6.9E-71 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 SMGD1_RS10340 64955f71dfd853e82db4d9aee07f6d1d 544 PRINTS PR00298 60kDa chaperonin signature 267 290 6.9E-71 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 SMGD1_RS10340 64955f71dfd853e82db4d9aee07f6d1d 544 PANTHER PTHR11353 1 544 4.3E-223 T 22-04-2016 SMGD1_RS06650 31ad108f1f9d9ff810be183b7451815a 930 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 20 26 - T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 SMGD1_RS06650 31ad108f1f9d9ff810be183b7451815a 930 Gene3D G3DSA:3.40.50.300 434 538 4.3E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS06650 31ad108f1f9d9ff810be183b7451815a 930 Gene3D G3DSA:3.40.50.300 593 702 1.3E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS06650 31ad108f1f9d9ff810be183b7451815a 930 PANTHER PTHR12131 423 888 7.4E-141 T 22-04-2016 SMGD1_RS06650 31ad108f1f9d9ff810be183b7451815a 930 SMART SM00490 607 695 2.6E-15 T 22-04-2016 IPR001650 Helicase, C-terminal SMGD1_RS06650 31ad108f1f9d9ff810be183b7451815a 930 Pfam PF00271 Helicase conserved C-terminal domain 582 695 5.4E-12 T 22-04-2016 IPR001650 Helicase, C-terminal SMGD1_RS06650 31ad108f1f9d9ff810be183b7451815a 930 Pfam PF12513 Mitochondrial degradasome RNA helicase subunit C terminal 841 887 1.7E-15 T 22-04-2016 IPR022192 Mitochondrial degradasome RNA helicase subunit, C-terminal domain GO:0016817 SMGD1_RS06650 31ad108f1f9d9ff810be183b7451815a 930 SUPERFAMILY SSF52540 433 702 2.95E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS06650 31ad108f1f9d9ff810be183b7451815a 930 SMART SM00487 420 588 0.0052 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SMGD1_RS10670 c5096354a28c433826437e4c46f2078e 171 PIRSF PIRSF026509 1 171 5.0E-40 T 22-04-2016 IPR005134 Uncharacterised protein family UPF0114 SMGD1_RS10670 c5096354a28c433826437e4c46f2078e 171 Pfam PF03350 Uncharacterized protein family, UPF0114 9 136 2.1E-34 T 22-04-2016 IPR005134 Uncharacterised protein family UPF0114 SMGD1_RS10670 c5096354a28c433826437e4c46f2078e 171 PANTHER PTHR31721 1 167 2.1E-30 T 22-04-2016 SMGD1_RS03585 1da930109ffba6e2d9cad1c430e7a050 146 PANTHER PTHR39966 1 137 1.4E-15 T 22-04-2016 SMGD1_RS03585 1da930109ffba6e2d9cad1c430e7a050 146 Gene3D G3DSA:1.20.120.520 17 133 1.6E-18 T 22-04-2016 SMGD1_RS03585 1da930109ffba6e2d9cad1c430e7a050 146 Pfam PF01814 Hemerythrin HHE cation binding domain 6 125 4.5E-17 T 22-04-2016 IPR012312 Haemerythrin-like SMGD1_RS03825 92201fa3027494a1f717f51d744ffa5c 234 Gene3D G3DSA:3.40.1280.10 1 159 8.1E-59 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SMGD1_RS03825 92201fa3027494a1f717f51d744ffa5c 234 PANTHER PTHR32125 1 227 4.5E-68 T 22-04-2016 SMGD1_RS03825 92201fa3027494a1f717f51d744ffa5c 234 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 234 77.54 T 22-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 SMGD1_RS03825 92201fa3027494a1f717f51d744ffa5c 234 Gene3D G3DSA:1.10.1270.20 160 230 2.6E-17 T 22-04-2016 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 SMGD1_RS03825 92201fa3027494a1f717f51d744ffa5c 234 PIRSF PIRSF000386 1 234 3.0E-79 T 22-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 SMGD1_RS03825 92201fa3027494a1f717f51d744ffa5c 234 SUPERFAMILY SSF75217 1 230 9.81E-78 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases SMGD1_RS03825 92201fa3027494a1f717f51d744ffa5c 234 PANTHER PTHR32125:SF1 1 227 4.5E-68 T 22-04-2016 SMGD1_RS03825 92201fa3027494a1f717f51d744ffa5c 234 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 230 6.4E-82 T 22-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 SMGD1_RS03825 92201fa3027494a1f717f51d744ffa5c 234 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 220 7.9E-54 T 22-04-2016 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 SMGD1_RS04805 90ef4534a771720c50125fd2b9dd0b25 262 PANTHER PTHR30188 2 259 4.0E-30 T 22-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 SMGD1_RS04805 90ef4534a771720c50125fd2b9dd0b25 262 Pfam PF02405 Permease MlaE 49 256 3.6E-44 T 22-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 SMGD1_RS03115 82a128994ce0ef57a5644a3a4d20ae84 224 SUPERFAMILY SSF46894 124 223 5.1E-26 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SMGD1_RS03115 82a128994ce0ef57a5644a3a4d20ae84 224 Pfam PF00072 Response regulator receiver domain 5 114 3.8E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS03115 82a128994ce0ef57a5644a3a4d20ae84 224 Gene3D G3DSA:1.10.10.10 126 223 4.1E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMGD1_RS03115 82a128994ce0ef57a5644a3a4d20ae84 224 PANTHER PTHR26402:SF292 3 223 2.3E-63 T 22-04-2016 SMGD1_RS03115 82a128994ce0ef57a5644a3a4d20ae84 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 223 8.1E-20 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMGD1_RS03115 82a128994ce0ef57a5644a3a4d20ae84 224 PANTHER PTHR26402 3 223 2.3E-63 T 22-04-2016 SMGD1_RS03115 82a128994ce0ef57a5644a3a4d20ae84 224 SUPERFAMILY SSF52172 4 120 1.34E-31 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS03115 82a128994ce0ef57a5644a3a4d20ae84 224 Gene3D G3DSA:3.40.50.2300 2 124 1.3E-32 T 22-04-2016 SMGD1_RS03115 82a128994ce0ef57a5644a3a4d20ae84 224 SMART SM00448 3 114 3.7E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS03115 82a128994ce0ef57a5644a3a4d20ae84 224 SMART SM00862 148 223 2.7E-19 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMGD1_RS04275 f662ddf3afd79419662712e490dfcb26 187 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 23 95 3.1E-10 T 22-04-2016 IPR000014 PAS domain SMGD1_RS04275 f662ddf3afd79419662712e490dfcb26 187 Pfam PF08447 PAS fold 31 98 1.4E-10 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 SMGD1_RS04275 f662ddf3afd79419662712e490dfcb26 187 PANTHER PTHR32089:SF52 7 94 3.8E-17 T 22-04-2016 SMGD1_RS04275 f662ddf3afd79419662712e490dfcb26 187 Gene3D G3DSA:3.30.450.20 19 103 1.4E-16 T 22-04-2016 SMGD1_RS04275 f662ddf3afd79419662712e490dfcb26 187 SUPERFAMILY SSF55785 19 103 1.19E-21 T 22-04-2016 IPR000014 PAS domain SMGD1_RS04275 f662ddf3afd79419662712e490dfcb26 187 PANTHER PTHR32089 7 94 3.8E-17 T 22-04-2016 SMGD1_RS06160 728633c54b9b3fb0b288cd1d3c2c3cba 438 PANTHER PTHR15184:SF9 1 433 2.7E-180 T 22-04-2016 IPR032463 ATPase, type III secretion system, FliI GO:0016887|GO:0030257|GO:0044780 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SMGD1_RS06160 728633c54b9b3fb0b288cd1d3c2c3cba 438 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 144 353 3.2E-68 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SMGD1_RS06160 728633c54b9b3fb0b288cd1d3c2c3cba 438 Gene3D G3DSA:3.40.50.300 91 355 1.4E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS06160 728633c54b9b3fb0b288cd1d3c2c3cba 438 PANTHER PTHR15184 1 433 2.7E-180 T 22-04-2016 SMGD1_RS06160 728633c54b9b3fb0b288cd1d3c2c3cba 438 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 12 433 8.4E-177 T 22-04-2016 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SMGD1_RS06160 728633c54b9b3fb0b288cd1d3c2c3cba 438 SMART SM00382 156 337 1.3E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain SMGD1_RS06160 728633c54b9b3fb0b288cd1d3c2c3cba 438 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 344 353 - T 22-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SMGD1_RS06160 728633c54b9b3fb0b288cd1d3c2c3cba 438 SUPERFAMILY SSF52540 90 359 4.87E-88 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS07720 f6e62d16423287b7edefdb2596551d97 404 PANTHER PTHR19271 7 402 1.5E-101 T 22-04-2016 SMGD1_RS07720 f6e62d16423287b7edefdb2596551d97 404 SUPERFAMILY SSF81648 242 380 4.84E-33 T 22-04-2016 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 SMGD1_RS07720 f6e62d16423287b7edefdb2596551d97 404 SUPERFAMILY SSF81342 12 289 1.26E-72 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 SMGD1_RS07720 f6e62d16423287b7edefdb2596551d97 404 Pfam PF00033 Cytochrome b/b6/petB 30 215 9.3E-49 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 SMGD1_RS07720 f6e62d16423287b7edefdb2596551d97 404 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 287 387 9.7E-27 T 22-04-2016 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 SMGD1_RS07720 f6e62d16423287b7edefdb2596551d97 404 PANTHER PTHR19271:SF9 7 402 1.5E-101 T 22-04-2016 SMGD1_RS07720 f6e62d16423287b7edefdb2596551d97 404 Gene3D G3DSA:1.20.810.10 12 402 1.2E-113 T 22-04-2016 IPR027387 Cytochrome b/b6-like domain SMGD1_RS12625 fa5e79451be87d85d7d429096e5b2cdb 497 SUPERFAMILY SSF52540 4 195 8.63E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS12625 fa5e79451be87d85d7d429096e5b2cdb 497 Gene3D G3DSA:3.40.50.300 334 481 2.8E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS12625 fa5e79451be87d85d7d429096e5b2cdb 497 ProSitePatterns PS00211 ABC transporters family signature. 112 126 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMGD1_RS12625 fa5e79451be87d85d7d429096e5b2cdb 497 PANTHER PTHR19211:SF45 279 487 2.5E-42 T 22-04-2016 SMGD1_RS12625 fa5e79451be87d85d7d429096e5b2cdb 497 PANTHER PTHR19211:SF45 1 247 2.5E-42 T 22-04-2016 SMGD1_RS12625 fa5e79451be87d85d7d429096e5b2cdb 497 Gene3D G3DSA:3.40.50.300 4 222 7.2E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS12625 fa5e79451be87d85d7d429096e5b2cdb 497 Pfam PF00005 ABC transporter 329 442 1.5E-10 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMGD1_RS12625 fa5e79451be87d85d7d429096e5b2cdb 497 Pfam PF00005 ABC transporter 24 140 2.5E-15 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMGD1_RS12625 fa5e79451be87d85d7d429096e5b2cdb 497 SMART SM00382 333 487 2.1E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain SMGD1_RS12625 fa5e79451be87d85d7d429096e5b2cdb 497 SMART SM00382 31 185 2.4E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain SMGD1_RS12625 fa5e79451be87d85d7d429096e5b2cdb 497 PANTHER PTHR19211 279 487 2.5E-42 T 22-04-2016 SMGD1_RS12625 fa5e79451be87d85d7d429096e5b2cdb 497 PANTHER PTHR19211 1 247 2.5E-42 T 22-04-2016 SMGD1_RS12625 fa5e79451be87d85d7d429096e5b2cdb 497 SUPERFAMILY SSF52540 329 487 1.22E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS04690 537ffb27c7cc8b36db1628f32763f046 120 ProSitePatterns PS00646 Ribosomal protein S13 signature. 88 101 - T 22-04-2016 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 SMGD1_RS04690 537ffb27c7cc8b36db1628f32763f046 120 Gene3D G3DSA:1.10.8.50 1 71 1.0E-26 T 22-04-2016 SMGD1_RS04690 537ffb27c7cc8b36db1628f32763f046 120 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 120 26.818 T 22-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS04690 537ffb27c7cc8b36db1628f32763f046 120 PIRSF PIRSF002134 1 119 3.9E-41 T 22-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS04690 537ffb27c7cc8b36db1628f32763f046 120 PANTHER PTHR10871 1 117 1.6E-56 T 22-04-2016 SMGD1_RS04690 537ffb27c7cc8b36db1628f32763f046 120 SUPERFAMILY SSF46946 2 115 5.1E-42 T 22-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 SMGD1_RS04690 537ffb27c7cc8b36db1628f32763f046 120 Pfam PF00416 Ribosomal protein S13/S18 3 109 1.1E-30 T 22-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS04690 537ffb27c7cc8b36db1628f32763f046 120 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 115 1.2E-49 T 22-04-2016 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS04690 537ffb27c7cc8b36db1628f32763f046 120 Gene3D G3DSA:4.10.910.10 73 118 3.3E-25 T 22-04-2016 IPR027437 30s ribosomal protein S13, C-terminal SMGD1_RS11620 2141de378429f4c9d52be9e44a47e65c 280 PANTHER PTHR22749:SF0 1 277 1.5E-34 T 22-04-2016 SMGD1_RS11620 2141de378429f4c9d52be9e44a47e65c 280 Pfam PF06574 FAD synthetase 9 35 1.6E-6 T 22-04-2016 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 SMGD1_RS11620 2141de378429f4c9d52be9e44a47e65c 280 Pfam PF06574 FAD synthetase 71 136 5.6E-7 T 22-04-2016 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 SMGD1_RS11620 2141de378429f4c9d52be9e44a47e65c 280 PANTHER PTHR22749 1 277 1.5E-34 T 22-04-2016 IPR023468 Riboflavin kinase KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|UniPathway: UPA00276 SMGD1_RS11620 2141de378429f4c9d52be9e44a47e65c 280 SUPERFAMILY SSF82114 145 276 6.98E-27 T 22-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 SMGD1_RS11620 2141de378429f4c9d52be9e44a47e65c 280 SMART SM00904 153 276 1.5E-32 T 22-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 SMGD1_RS11620 2141de378429f4c9d52be9e44a47e65c 280 SUPERFAMILY SSF52374 13 156 1.89E-16 T 22-04-2016 SMGD1_RS11620 2141de378429f4c9d52be9e44a47e65c 280 Gene3D G3DSA:3.40.50.620 7 155 1.6E-23 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMGD1_RS11620 2141de378429f4c9d52be9e44a47e65c 280 Pfam PF01687 Riboflavin kinase 154 273 4.3E-22 T 22-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 SMGD1_RS11620 2141de378429f4c9d52be9e44a47e65c 280 PIRSF PIRSF004491 2 279 4.6E-54 T 22-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 SMGD1_RS11620 2141de378429f4c9d52be9e44a47e65c 280 Gene3D G3DSA:2.40.30.30 156 276 5.1E-22 T 22-04-2016 IPR023465 Riboflavin kinase domain GO:0008531|GO:0009231 SMGD1_RS10635 93d82805e44f1a93f62dc82a7562c0ff 166 SUPERFAMILY SSF52255 3 160 3.4E-59 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 SMGD1_RS10635 93d82805e44f1a93f62dc82a7562c0ff 166 PIRSF PIRSF001338 1 164 2.3E-62 T 22-04-2016 IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE GO:0006189|GO:0034023 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234|UniPathway: UPA00074 SMGD1_RS10635 93d82805e44f1a93f62dc82a7562c0ff 166 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 4 159 5.0E-57 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 SMGD1_RS10635 93d82805e44f1a93f62dc82a7562c0ff 166 SMART SM01001 2 153 2.0E-88 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 SMGD1_RS10635 93d82805e44f1a93f62dc82a7562c0ff 166 Pfam PF00731 AIR carboxylase 4 150 3.1E-56 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 SMGD1_RS10635 93d82805e44f1a93f62dc82a7562c0ff 166 PANTHER PTHR23046 4 166 2.6E-66 T 22-04-2016 SMGD1_RS10635 93d82805e44f1a93f62dc82a7562c0ff 166 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 4 157 29.805 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 SMGD1_RS10635 93d82805e44f1a93f62dc82a7562c0ff 166 Gene3D G3DSA:3.40.50.7700 4 160 7.0E-63 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 SMGD1_RS04905 06ca62c5fbcc667595cfcb8eef5997f4 141 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 22-04-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS04905 06ca62c5fbcc667595cfcb8eef5997f4 141 Gene3D G3DSA:3.90.1170.10 24 137 1.4E-49 T 22-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 SMGD1_RS04905 06ca62c5fbcc667595cfcb8eef5997f4 141 PRINTS PR00060 Ribosomal protein L16 signature 24 36 1.9E-32 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 SMGD1_RS04905 06ca62c5fbcc667595cfcb8eef5997f4 141 PRINTS PR00060 Ribosomal protein L16 signature 58 87 1.9E-32 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 SMGD1_RS04905 06ca62c5fbcc667595cfcb8eef5997f4 141 PRINTS PR00060 Ribosomal protein L16 signature 88 117 1.9E-32 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 SMGD1_RS04905 06ca62c5fbcc667595cfcb8eef5997f4 141 PRINTS PR00060 Ribosomal protein L16 signature 42 53 1.9E-32 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 SMGD1_RS04905 06ca62c5fbcc667595cfcb8eef5997f4 141 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 36.189 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 SMGD1_RS04905 06ca62c5fbcc667595cfcb8eef5997f4 141 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 126 1.6E-54 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 SMGD1_RS04905 06ca62c5fbcc667595cfcb8eef5997f4 141 PANTHER PTHR12220 1 136 1.2E-62 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 SMGD1_RS04905 06ca62c5fbcc667595cfcb8eef5997f4 141 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 22-04-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS04905 06ca62c5fbcc667595cfcb8eef5997f4 141 SUPERFAMILY SSF54686 1 136 2.49E-54 T 22-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 SMGD1_RS04905 06ca62c5fbcc667595cfcb8eef5997f4 141 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 1.6E-45 T 22-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 SMGD1_RS01370 cacb56da18cf563baa659051eddfb2e9 1037 SUPERFAMILY SSF82693 44 129 1.73E-11 T 22-04-2016 SMGD1_RS01370 cacb56da18cf563baa659051eddfb2e9 1037 SUPERFAMILY SSF82714 182 261 1.11E-5 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMGD1_RS01370 cacb56da18cf563baa659051eddfb2e9 1037 SUPERFAMILY SSF82866 816 1033 4.05E-39 T 22-04-2016 SMGD1_RS01370 cacb56da18cf563baa659051eddfb2e9 1037 Gene3D G3DSA:1.10.3850.10 270 482 3.0E-42 T 22-04-2016 SMGD1_RS01370 cacb56da18cf563baa659051eddfb2e9 1037 Gene3D G3DSA:1.10.3850.10 828 1031 1.2E-43 T 22-04-2016 SMGD1_RS01370 cacb56da18cf563baa659051eddfb2e9 1037 SUPERFAMILY SSF82866 288 484 3.66E-36 T 22-04-2016 SMGD1_RS01370 cacb56da18cf563baa659051eddfb2e9 1037 Gene3D G3DSA:3.30.2090.10 183 261 5.3E-4 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMGD1_RS01370 cacb56da18cf563baa659051eddfb2e9 1037 PANTHER PTHR32063 652 1036 1.6E-178 T 22-04-2016 SMGD1_RS01370 cacb56da18cf563baa659051eddfb2e9 1037 PANTHER PTHR32063 2 627 1.6E-178 T 22-04-2016 SMGD1_RS01370 cacb56da18cf563baa659051eddfb2e9 1037 SUPERFAMILY SSF82693 265 320 6.8E-7 T 22-04-2016 SMGD1_RS01370 cacb56da18cf563baa659051eddfb2e9 1037 SUPERFAMILY SSF82693 140 180 6.8E-7 T 22-04-2016 SMGD1_RS01370 cacb56da18cf563baa659051eddfb2e9 1037 PRINTS PR00702 Acriflavin resistance protein family signature 326 349 3.8E-24 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMGD1_RS01370 cacb56da18cf563baa659051eddfb2e9 1037 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 3.8E-24 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMGD1_RS01370 cacb56da18cf563baa659051eddfb2e9 1037 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 3.8E-24 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMGD1_RS01370 cacb56da18cf563baa659051eddfb2e9 1037 PRINTS PR00702 Acriflavin resistance protein family signature 433 456 3.8E-24 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMGD1_RS01370 cacb56da18cf563baa659051eddfb2e9 1037 PRINTS PR00702 Acriflavin resistance protein family signature 380 404 3.8E-24 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMGD1_RS01370 cacb56da18cf563baa659051eddfb2e9 1037 Pfam PF00873 AcrB/AcrD/AcrF family 5 1029 2.4E-137 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMGD1_RS01370 cacb56da18cf563baa659051eddfb2e9 1037 Gene3D G3DSA:3.30.70.1430 44 131 8.0E-14 T 22-04-2016 SMGD1_RS06400 fb4024df03e878cf26ef3fae8efc8f41 365 Gene3D G3DSA:1.10.3210.10 15 195 7.0E-74 T 22-04-2016 IPR006674 HD domain SMGD1_RS06400 fb4024df03e878cf26ef3fae8efc8f41 365 Gene3D G3DSA:1.10.3210.10 264 363 7.0E-74 T 22-04-2016 IPR006674 HD domain SMGD1_RS06400 fb4024df03e878cf26ef3fae8efc8f41 365 PANTHER PTHR11373 11 271 9.7E-66 T 22-04-2016 SMGD1_RS06400 fb4024df03e878cf26ef3fae8efc8f41 365 Gene3D G3DSA:1.10.3410.10 196 250 4.5E-4 T 22-04-2016 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain SMGD1_RS06400 fb4024df03e878cf26ef3fae8efc8f41 365 Pfam PF13286 Phosphohydrolase-associated domain 273 359 2.6E-19 T 22-04-2016 IPR026875 Phosphohydrolase-associated domain SMGD1_RS06400 fb4024df03e878cf26ef3fae8efc8f41 365 Pfam PF01966 HD domain 52 187 1.7E-15 T 22-04-2016 IPR006674 HD domain SMGD1_RS06400 fb4024df03e878cf26ef3fae8efc8f41 365 SMART SM00471 48 196 4.8E-11 T 22-04-2016 IPR003607 HD/PDEase domain SMGD1_RS06400 fb4024df03e878cf26ef3fae8efc8f41 365 Hamap MF_01212 Deoxyguanosinetriphosphate triphosphohydrolase-like protein. 2 362 32.607 T 22-04-2016 IPR023023 Deoxyguanosinetriphosphate triphosphohydrolase, type 2 SMGD1_RS06400 fb4024df03e878cf26ef3fae8efc8f41 365 PANTHER PTHR11373:SF25 11 271 9.7E-66 T 22-04-2016 SMGD1_RS06400 fb4024df03e878cf26ef3fae8efc8f41 365 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 15 361 2.6E-83 T 22-04-2016 IPR006261 Deoxyguanosinetriphosphate triphosphohydrolase GO:0000287|GO:0008832|GO:0046039 SMGD1_RS06400 fb4024df03e878cf26ef3fae8efc8f41 365 SUPERFAMILY SSF109604 10 362 5.16E-79 T 22-04-2016 SMGD1_RS04465 9ad35de84e6fc4239823674d14d4cc32 159 ProSitePatterns PS01109 Ribosomal protein L10 signature. 6 40 - T 22-04-2016 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS04465 9ad35de84e6fc4239823674d14d4cc32 159 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 1 156 22.864 T 22-04-2016 IPR022973 Ribosomal protein L10 SMGD1_RS04465 9ad35de84e6fc4239823674d14d4cc32 159 Pfam PF00466 Ribosomal protein L10 1 96 3.8E-20 T 22-04-2016 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 SMGD1_RS04465 9ad35de84e6fc4239823674d14d4cc32 159 SUPERFAMILY SSF160369 1 155 5.23E-41 T 22-04-2016 SMGD1_RS04465 9ad35de84e6fc4239823674d14d4cc32 159 PANTHER PTHR11560 1 159 2.7E-31 T 22-04-2016 SMGD1_RS01500 558512aeb470bc69dbb8ba9cf4ff7b01 919 PANTHER PTHR11946:SF11 275 917 0.0 T 22-04-2016 SMGD1_RS01500 558512aeb470bc69dbb8ba9cf4ff7b01 919 PANTHER PTHR11946:SF11 5 255 0.0 T 22-04-2016 SMGD1_RS01500 558512aeb470bc69dbb8ba9cf4ff7b01 919 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 57 68 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMGD1_RS01500 558512aeb470bc69dbb8ba9cf4ff7b01 919 SUPERFAMILY SSF52374 1 203 8.34E-132 T 22-04-2016 SMGD1_RS01500 558512aeb470bc69dbb8ba9cf4ff7b01 919 SUPERFAMILY SSF52374 401 656 8.34E-132 T 22-04-2016 SMGD1_RS01500 558512aeb470bc69dbb8ba9cf4ff7b01 919 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 569 578 8.9E-33 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 SMGD1_RS01500 558512aeb470bc69dbb8ba9cf4ff7b01 919 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 399 414 8.9E-33 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 SMGD1_RS01500 558512aeb470bc69dbb8ba9cf4ff7b01 919 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 50 61 8.9E-33 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 SMGD1_RS01500 558512aeb470bc69dbb8ba9cf4ff7b01 919 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 533 546 8.9E-33 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 SMGD1_RS01500 558512aeb470bc69dbb8ba9cf4ff7b01 919 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 234 257 8.9E-33 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 SMGD1_RS01500 558512aeb470bc69dbb8ba9cf4ff7b01 919 Pfam PF08264 Anticodon-binding domain of tRNA 690 839 7.9E-21 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 SMGD1_RS01500 558512aeb470bc69dbb8ba9cf4ff7b01 919 Gene3D G3DSA:1.10.730.10 650 784 1.5E-28 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMGD1_RS01500 558512aeb470bc69dbb8ba9cf4ff7b01 919 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 27 649 5.0E-221 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMGD1_RS01500 558512aeb470bc69dbb8ba9cf4ff7b01 919 Gene3D G3DSA:3.40.50.620 12 201 3.2E-135 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMGD1_RS01500 558512aeb470bc69dbb8ba9cf4ff7b01 919 Gene3D G3DSA:3.40.50.620 404 645 3.2E-135 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMGD1_RS01500 558512aeb470bc69dbb8ba9cf4ff7b01 919 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 1 918 19.087 T 22-04-2016 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5 SMGD1_RS01500 558512aeb470bc69dbb8ba9cf4ff7b01 919 SUPERFAMILY SSF50677 207 403 1.78E-45 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 SMGD1_RS01500 558512aeb470bc69dbb8ba9cf4ff7b01 919 Gene3D G3DSA:3.90.740.10 207 389 6.2E-53 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 SMGD1_RS01500 558512aeb470bc69dbb8ba9cf4ff7b01 919 SUPERFAMILY SSF47323 660 918 7.66E-45 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMGD1_RS01500 558512aeb470bc69dbb8ba9cf4ff7b01 919 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 14 807 1.3E-271 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 SMGD1_RS01500 558512aeb470bc69dbb8ba9cf4ff7b01 919 PANTHER PTHR11946 275 917 0.0 T 22-04-2016 SMGD1_RS01500 558512aeb470bc69dbb8ba9cf4ff7b01 919 PANTHER PTHR11946 5 255 0.0 T 22-04-2016 SMGD1_RS10220 d4e347b1dafe2932aca04278ca0f6028 848 SUPERFAMILY SSF52540 349 562 3.08E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS10220 d4e347b1dafe2932aca04278ca0f6028 848 Pfam PF01580 FtsK/SpoIIIE family 350 558 7.7E-31 T 22-04-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 SMGD1_RS10220 d4e347b1dafe2932aca04278ca0f6028 848 Gene3D G3DSA:3.40.50.300 350 566 3.5E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS10220 d4e347b1dafe2932aca04278ca0f6028 848 PANTHER PTHR22683 348 602 7.8E-29 T 22-04-2016 SMGD1_RS10095 e76bd9b136ac263e398997dcc5af598e 685 Gene3D G3DSA:1.25.40.10 445 605 7.5E-11 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS10095 e76bd9b136ac263e398997dcc5af598e 685 SUPERFAMILY SSF48452 157 317 1.44E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS10095 e76bd9b136ac263e398997dcc5af598e 685 Gene3D G3DSA:1.25.40.10 384 444 1.5E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS10095 e76bd9b136ac263e398997dcc5af598e 685 Pfam PF13374 Tetratricopeptide repeat 387 422 1.1E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS10095 e76bd9b136ac263e398997dcc5af598e 685 Pfam PF13374 Tetratricopeptide repeat 339 375 1.3E-4 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS10095 e76bd9b136ac263e398997dcc5af598e 685 Pfam PF13374 Tetratricopeptide repeat 155 187 2.5E-4 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS10095 e76bd9b136ac263e398997dcc5af598e 685 Gene3D G3DSA:1.25.40.10 250 367 1.4E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS10095 e76bd9b136ac263e398997dcc5af598e 685 Gene3D G3DSA:1.25.40.10 150 190 1.4E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS10095 e76bd9b136ac263e398997dcc5af598e 685 Pfam PF13424 Tetratricopeptide repeat 430 508 5.4E-9 T 22-04-2016 SMGD1_RS10095 e76bd9b136ac263e398997dcc5af598e 685 SUPERFAMILY SSF48452 419 550 1.37E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS10095 e76bd9b136ac263e398997dcc5af598e 685 PANTHER PTHR19959:SF128 140 552 4.1E-22 T 22-04-2016 SMGD1_RS10095 e76bd9b136ac263e398997dcc5af598e 685 PANTHER PTHR19959:SF128 1 14 4.1E-22 T 22-04-2016 SMGD1_RS10095 e76bd9b136ac263e398997dcc5af598e 685 SUPERFAMILY SSF48452 334 461 1.14E-16 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS10095 e76bd9b136ac263e398997dcc5af598e 685 PANTHER PTHR19959 140 552 4.1E-22 T 22-04-2016 SMGD1_RS10095 e76bd9b136ac263e398997dcc5af598e 685 PANTHER PTHR19959 1 14 4.1E-22 T 22-04-2016 SMGD1_RS10095 e76bd9b136ac263e398997dcc5af598e 685 SMART SM00028 338 371 22.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMGD1_RS10095 e76bd9b136ac263e398997dcc5af598e 685 SMART SM00028 430 463 0.016 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMGD1_RS10095 e76bd9b136ac263e398997dcc5af598e 685 SMART SM00028 153 186 33.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMGD1_RS10095 e76bd9b136ac263e398997dcc5af598e 685 SMART SM00028 384 417 9.9 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMGD1_RS10095 e76bd9b136ac263e398997dcc5af598e 685 SMART SM00028 567 600 210.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMGD1_RS10095 e76bd9b136ac263e398997dcc5af598e 685 SMART SM00028 476 509 18.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMGD1_RS01025 758e4caf804ca086fe7488f11789937b 518 PANTHER PTHR35004:SF2 4 460 1.2E-85 T 22-04-2016 SMGD1_RS01025 758e4caf804ca086fe7488f11789937b 518 Pfam PF00665 Integrase core domain 141 269 2.5E-14 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SMGD1_RS01025 758e4caf804ca086fe7488f11789937b 518 Gene3D G3DSA:3.30.420.10 163 305 3.8E-9 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMGD1_RS01025 758e4caf804ca086fe7488f11789937b 518 PANTHER PTHR35004 4 460 1.2E-85 T 22-04-2016 SMGD1_RS01025 758e4caf804ca086fe7488f11789937b 518 SUPERFAMILY SSF53098 142 309 1.86E-9 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMGD1_RS12680 758e4caf804ca086fe7488f11789937b 518 PANTHER PTHR35004:SF2 4 460 1.2E-85 T 22-04-2016 SMGD1_RS12680 758e4caf804ca086fe7488f11789937b 518 Pfam PF00665 Integrase core domain 141 269 2.5E-14 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SMGD1_RS12680 758e4caf804ca086fe7488f11789937b 518 Gene3D G3DSA:3.30.420.10 163 305 3.8E-9 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMGD1_RS12680 758e4caf804ca086fe7488f11789937b 518 PANTHER PTHR35004 4 460 1.2E-85 T 22-04-2016 SMGD1_RS12680 758e4caf804ca086fe7488f11789937b 518 SUPERFAMILY SSF53098 142 309 1.86E-9 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMGD1_RS06560 3330ec7c37f08fa83f43e62f5e38acd8 499 Gene3D G3DSA:3.80.30.20 160 352 2.2E-32 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe SMGD1_RS06560 3330ec7c37f08fa83f43e62f5e38acd8 499 Pfam PF13311 Protein of unknown function (DUF4080) 354 476 4.5E-18 T 22-04-2016 IPR025288 Domain of unknown function DUF4080 SMGD1_RS06560 3330ec7c37f08fa83f43e62f5e38acd8 499 Pfam PF04055 Radical SAM superfamily 164 325 2.0E-12 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SMGD1_RS06560 3330ec7c37f08fa83f43e62f5e38acd8 499 PANTHER PTHR11918 1 346 2.6E-44 T 22-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein SMGD1_RS06560 3330ec7c37f08fa83f43e62f5e38acd8 499 Pfam PF02310 B12 binding domain 11 120 1.1E-12 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 SMGD1_RS06560 3330ec7c37f08fa83f43e62f5e38acd8 499 SUPERFAMILY SSF102114 141 359 6.15E-33 T 22-04-2016 SMGD1_RS06560 3330ec7c37f08fa83f43e62f5e38acd8 499 SMART SM00729 160 373 8.1E-13 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 SMGD1_RS06560 3330ec7c37f08fa83f43e62f5e38acd8 499 PANTHER PTHR11918:SF64 1 346 2.6E-44 T 22-04-2016 SMGD1_RS08790 c666b69d201e8e5316fc91e6aaccd4a1 122 Pfam PF01230 HIT domain 5 86 3.5E-4 T 22-04-2016 IPR001310 Histidine triad (HIT) protein SMGD1_RS08790 c666b69d201e8e5316fc91e6aaccd4a1 122 Gene3D G3DSA:3.30.428.10 5 102 8.1E-19 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 SMGD1_RS08790 c666b69d201e8e5316fc91e6aaccd4a1 122 SUPERFAMILY SSF54197 4 121 4.04E-19 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 SMGD1_RS13940 702a6f3175f9c6c048001b788e713ec4 326 SUPERFAMILY SSF46548 118 244 8.89E-31 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 SMGD1_RS13940 702a6f3175f9c6c048001b788e713ec4 326 Gene3D G3DSA:1.10.1060.10 117 245 4.3E-33 T 22-04-2016 SMGD1_RS13940 702a6f3175f9c6c048001b788e713ec4 326 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 157 168 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SMGD1_RS13940 702a6f3175f9c6c048001b788e713ec4 326 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 214 225 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SMGD1_RS13940 702a6f3175f9c6c048001b788e713ec4 326 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 12 119 4.6E-30 T 22-04-2016 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 SMGD1_RS13940 702a6f3175f9c6c048001b788e713ec4 326 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 62 70 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 SMGD1_RS13940 702a6f3175f9c6c048001b788e713ec4 326 Gene3D G3DSA:3.10.20.30 7 114 7.8E-32 T 22-04-2016 IPR012675 Beta-grasp domain SMGD1_RS13940 702a6f3175f9c6c048001b788e713ec4 326 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 15 237 3.4E-72 T 22-04-2016 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 SMGD1_RS13940 702a6f3175f9c6c048001b788e713ec4 326 SUPERFAMILY SSF54292 10 114 8.39E-24 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 SMGD1_RS13940 702a6f3175f9c6c048001b788e713ec4 326 PANTHER PTHR11921:SF12 1 251 1.1E-67 T 22-04-2016 SMGD1_RS13940 702a6f3175f9c6c048001b788e713ec4 326 PANTHER PTHR11921 1 251 1.1E-67 T 22-04-2016 SMGD1_RS13940 702a6f3175f9c6c048001b788e713ec4 326 Pfam PF13183 4Fe-4S dicluster domain 154 228 2.6E-12 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SMGD1_RS11410 bea91cce9183d1722fb58a147977e068 188 PANTHER PTHR30625 80 173 2.1E-17 T 22-04-2016 SMGD1_RS11410 bea91cce9183d1722fb58a147977e068 188 Pfam PF01618 MotA/TolQ/ExbB proton channel family 67 177 1.6E-25 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 SMGD1_RS12390 68918da18b236961eed6be3c576cd02e 183 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 57 79 - T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 SMGD1_RS12390 68918da18b236961eed6be3c576cd02e 183 PANTHER PTHR14269 1 172 3.6E-34 T 22-04-2016 SMGD1_RS12390 68918da18b236961eed6be3c576cd02e 183 PIRSF PIRSF000847 1 183 1.4E-46 T 22-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 SMGD1_RS12390 68918da18b236961eed6be3c576cd02e 183 Pfam PF01066 CDP-alcohol phosphatidyltransferase 3 79 4.6E-15 T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 SMGD1_RS12390 68918da18b236961eed6be3c576cd02e 183 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 3 179 2.3E-45 T 22-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 SMGD1_RS08940 1ee325041754fc4a1f7634c1c0e451a6 400 PIRSF PIRSF000724 1 400 2.4E-142 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SMGD1_RS08940 1ee325041754fc4a1f7634c1c0e451a6 400 PANTHER PTHR11406 4 392 5.7E-201 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SMGD1_RS08940 1ee325041754fc4a1f7634c1c0e451a6 400 Gene3D G3DSA:3.40.50.1260 5 183 1.0E-69 T 22-04-2016 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SMGD1_RS08940 1ee325041754fc4a1f7634c1c0e451a6 400 SUPERFAMILY SSF53748 2 394 1.02E-144 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SMGD1_RS08940 1ee325041754fc4a1f7634c1c0e451a6 400 Gene3D G3DSA:3.40.50.1270 184 384 3.9E-79 T 22-04-2016 IPR015901 Phosphoglycerate kinase, C-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SMGD1_RS08940 1ee325041754fc4a1f7634c1c0e451a6 400 Pfam PF00162 Phosphoglycerate kinase 6 386 3.6E-149 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SMGD1_RS08940 1ee325041754fc4a1f7634c1c0e451a6 400 PRINTS PR00477 Phosphoglycerate kinase family signature 372 389 9.7E-85 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SMGD1_RS08940 1ee325041754fc4a1f7634c1c0e451a6 400 PRINTS PR00477 Phosphoglycerate kinase family signature 138 160 9.7E-85 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SMGD1_RS08940 1ee325041754fc4a1f7634c1c0e451a6 400 PRINTS PR00477 Phosphoglycerate kinase family signature 171 193 9.7E-85 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SMGD1_RS08940 1ee325041754fc4a1f7634c1c0e451a6 400 PRINTS PR00477 Phosphoglycerate kinase family signature 316 341 9.7E-85 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SMGD1_RS08940 1ee325041754fc4a1f7634c1c0e451a6 400 PRINTS PR00477 Phosphoglycerate kinase family signature 32 54 9.7E-85 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SMGD1_RS08940 1ee325041754fc4a1f7634c1c0e451a6 400 PRINTS PR00477 Phosphoglycerate kinase family signature 349 360 9.7E-85 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SMGD1_RS08940 1ee325041754fc4a1f7634c1c0e451a6 400 PRINTS PR00477 Phosphoglycerate kinase family signature 110 125 9.7E-85 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SMGD1_RS08940 1ee325041754fc4a1f7634c1c0e451a6 400 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 9.7E-85 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SMGD1_RS08940 1ee325041754fc4a1f7634c1c0e451a6 400 PRINTS PR00477 Phosphoglycerate kinase family signature 194 213 9.7E-85 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SMGD1_RS08940 1ee325041754fc4a1f7634c1c0e451a6 400 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 22-04-2016 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SMGD1_RS08940 1ee325041754fc4a1f7634c1c0e451a6 400 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 5 396 38.918 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SMGD1_RS04405 be892ee5279631e4482fe29d66528f49 281 Pfam PF02569 Pantoate-beta-alanine ligase 3 279 2.6E-90 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 SMGD1_RS04405 be892ee5279631e4482fe29d66528f49 281 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 281 3.1E-94 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 SMGD1_RS04405 be892ee5279631e4482fe29d66528f49 281 Hamap MF_00158 Pantothenate synthetase [panC]. 2 281 36.351 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 SMGD1_RS04405 be892ee5279631e4482fe29d66528f49 281 Gene3D G3DSA:3.40.50.620 1 178 2.6E-65 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMGD1_RS04405 be892ee5279631e4482fe29d66528f49 281 SUPERFAMILY SSF52374 1 281 6.31E-93 T 22-04-2016 SMGD1_RS04405 be892ee5279631e4482fe29d66528f49 281 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 31 65 8.7E-9 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 SMGD1_RS04405 be892ee5279631e4482fe29d66528f49 281 PANTHER PTHR21299 1 281 5.9E-109 T 22-04-2016 SMGD1_RS04405 be892ee5279631e4482fe29d66528f49 281 Gene3D G3DSA:3.30.1300.10 180 281 2.9E-26 T 22-04-2016 SMGD1_RS04405 be892ee5279631e4482fe29d66528f49 281 PANTHER PTHR21299:SF1 1 281 5.9E-109 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 SMGD1_RS03425 a55b32b821ba30e7b939b72b9d198617 289 PIRSF PIRSF016660 1 289 1.6E-97 T 22-04-2016 IPR008526 Inner membrane protein YedI SMGD1_RS03425 a55b32b821ba30e7b939b72b9d198617 289 PANTHER PTHR30503 1 286 6.3E-68 T 22-04-2016 SMGD1_RS03425 a55b32b821ba30e7b939b72b9d198617 289 Pfam PF05661 Protein of unknown function (DUF808) 3 284 2.7E-95 T 22-04-2016 IPR008526 Inner membrane protein YedI SMGD1_RS06740 46b0373e6b172bea6a0f3a3542ea278d 277 Gene3D G3DSA:3.40.50.1980 20 126 1.6E-25 T 22-04-2016 SMGD1_RS06740 46b0373e6b172bea6a0f3a3542ea278d 277 Pfam PF01497 Periplasmic binding protein 22 247 1.9E-28 T 22-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 SMGD1_RS06740 46b0373e6b172bea6a0f3a3542ea278d 277 Gene3D G3DSA:3.40.50.1980 136 268 2.5E-16 T 22-04-2016 SMGD1_RS06740 46b0373e6b172bea6a0f3a3542ea278d 277 SUPERFAMILY SSF53807 20 266 4.71E-43 T 22-04-2016 SMGD1_RS06740 46b0373e6b172bea6a0f3a3542ea278d 277 PANTHER PTHR30535 20 265 1.0E-28 T 22-04-2016 SMGD1_RS05420 1315d3ee3fbd097cfdd74a66cfce98c9 428 SMART SM00086 221 263 1.8E-4 T 22-04-2016 IPR001610 PAC motif SMGD1_RS05420 1315d3ee3fbd097cfdd74a66cfce98c9 428 Pfam PF00990 Diguanylate cyclase, GGDEF domain 272 422 1.5E-46 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS05420 1315d3ee3fbd097cfdd74a66cfce98c9 428 Pfam PF13426 PAS domain 161 261 7.2E-14 T 22-04-2016 IPR000014 PAS domain SMGD1_RS05420 1315d3ee3fbd097cfdd74a66cfce98c9 428 Gene3D G3DSA:3.30.450.20 161 261 1.8E-23 T 22-04-2016 SMGD1_RS05420 1315d3ee3fbd097cfdd74a66cfce98c9 428 SUPERFAMILY SSF55785 9 77 1.93E-10 T 22-04-2016 IPR000014 PAS domain SMGD1_RS05420 1315d3ee3fbd097cfdd74a66cfce98c9 428 Gene3D G3DSA:3.30.70.270 272 425 3.6E-52 T 22-04-2016 SMGD1_RS05420 1315d3ee3fbd097cfdd74a66cfce98c9 428 SUPERFAMILY SSF55073 275 425 5.02E-46 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS05420 1315d3ee3fbd097cfdd74a66cfce98c9 428 SUPERFAMILY SSF55785 159 260 1.41E-24 T 22-04-2016 IPR000014 PAS domain SMGD1_RS05420 1315d3ee3fbd097cfdd74a66cfce98c9 428 PANTHER PTHR10799 8 34 4.3E-32 T 22-04-2016 SMGD1_RS05420 1315d3ee3fbd097cfdd74a66cfce98c9 428 PANTHER PTHR10799 303 424 4.3E-32 T 22-04-2016 SMGD1_RS05420 1315d3ee3fbd097cfdd74a66cfce98c9 428 Gene3D G3DSA:3.30.450.20 10 81 8.5E-9 T 22-04-2016 SMGD1_RS05420 1315d3ee3fbd097cfdd74a66cfce98c9 428 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 266 425 2.8E-49 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS05420 1315d3ee3fbd097cfdd74a66cfce98c9 428 SMART SM00091 143 215 1.3 T 22-04-2016 IPR000014 PAS domain SMGD1_RS05420 1315d3ee3fbd097cfdd74a66cfce98c9 428 SMART SM00091 5 71 0.14 T 22-04-2016 IPR000014 PAS domain SMGD1_RS05420 1315d3ee3fbd097cfdd74a66cfce98c9 428 SMART SM00267 262 427 1.8E-55 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS05420 1315d3ee3fbd097cfdd74a66cfce98c9 428 PANTHER PTHR10799:SF750 8 34 4.3E-32 T 22-04-2016 SMGD1_RS05420 1315d3ee3fbd097cfdd74a66cfce98c9 428 PANTHER PTHR10799:SF750 303 424 4.3E-32 T 22-04-2016 SMGD1_RS05420 1315d3ee3fbd097cfdd74a66cfce98c9 428 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 154 267 2.0E-18 T 22-04-2016 IPR000014 PAS domain SMGD1_RS05420 1315d3ee3fbd097cfdd74a66cfce98c9 428 Pfam PF00989 PAS fold 9 72 4.4E-7 T 22-04-2016 IPR013767 PAS fold GO:0006355 SMGD1_RS07705 8befb66685699ff23c64b7e14c691b68 627 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 22-04-2016 IPR020595 MnmG-related, conserved site SMGD1_RS07705 8befb66685699ff23c64b7e14c691b68 627 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 3 620 3.7E-258 T 22-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 SMGD1_RS07705 8befb66685699ff23c64b7e14c691b68 627 Gene3D G3DSA:3.50.50.60 1 169 3.3E-31 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS07705 8befb66685699ff23c64b7e14c691b68 627 SUPERFAMILY SSF51905 93 258 3.48E-40 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS07705 8befb66685699ff23c64b7e14c691b68 627 SUPERFAMILY SSF51905 1 62 3.48E-40 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS07705 8befb66685699ff23c64b7e14c691b68 627 SMART SM01228 545 616 7.2E-31 T 22-04-2016 SMGD1_RS07705 8befb66685699ff23c64b7e14c691b68 627 Pfam PF13932 GidA associated domain 401 614 1.2E-61 T 22-04-2016 IPR026904 GidA associated domain 3 SMGD1_RS07705 8befb66685699ff23c64b7e14c691b68 627 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 1 623 39.76 T 22-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 SMGD1_RS07705 8befb66685699ff23c64b7e14c691b68 627 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 22-04-2016 IPR020595 MnmG-related, conserved site SMGD1_RS07705 8befb66685699ff23c64b7e14c691b68 627 Pfam PF01134 Glucose inhibited division protein A 4 399 3.0E-153 T 22-04-2016 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 SMGD1_RS07705 8befb66685699ff23c64b7e14c691b68 627 PANTHER PTHR11806 2 627 0.0 T 22-04-2016 SMGD1_RS07705 8befb66685699ff23c64b7e14c691b68 627 PANTHER PTHR11806:SF0 2 627 0.0 T 22-04-2016 SMGD1_RS11965 08b2fbfa05f0c1f018570a693bd814fa 467 Pfam PF00425 chorismate binding enzyme 201 455 1.1E-92 T 22-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal SMGD1_RS11965 08b2fbfa05f0c1f018570a693bd814fa 467 PANTHER PTHR11236 4 464 2.5E-170 T 22-04-2016 SMGD1_RS11965 08b2fbfa05f0c1f018570a693bd814fa 467 PRINTS PR00095 Anthranilate synthase component I signature 397 411 1.2E-23 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SMGD1_RS11965 08b2fbfa05f0c1f018570a693bd814fa 467 PRINTS PR00095 Anthranilate synthase component I signature 303 316 1.2E-23 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SMGD1_RS11965 08b2fbfa05f0c1f018570a693bd814fa 467 PRINTS PR00095 Anthranilate synthase component I signature 317 330 1.2E-23 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SMGD1_RS11965 08b2fbfa05f0c1f018570a693bd814fa 467 PRINTS PR00095 Anthranilate synthase component I signature 412 426 1.2E-23 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SMGD1_RS11965 08b2fbfa05f0c1f018570a693bd814fa 467 PANTHER PTHR11236:SF9 4 464 2.5E-170 T 22-04-2016 SMGD1_RS11965 08b2fbfa05f0c1f018570a693bd814fa 467 SUPERFAMILY SSF56322 4 464 1.14E-133 T 22-04-2016 IPR005801 ADC synthase GO:0009058 SMGD1_RS11965 08b2fbfa05f0c1f018570a693bd814fa 467 Pfam PF04715 Anthranilate synthase component I, N terminal region 10 160 1.5E-27 T 22-04-2016 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SMGD1_RS11965 08b2fbfa05f0c1f018570a693bd814fa 467 Gene3D G3DSA:3.60.120.10 4 464 1.1E-143 T 22-04-2016 IPR005801 ADC synthase GO:0009058 SMGD1_RS05335 70f84f14acde8839608a17ef5815ff68 251 PRINTS PR01021 OMPA domain signature 194 210 5.0E-8 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SMGD1_RS05335 70f84f14acde8839608a17ef5815ff68 251 PRINTS PR01021 OMPA domain signature 149 171 5.0E-8 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SMGD1_RS05335 70f84f14acde8839608a17ef5815ff68 251 PRINTS PR01021 OMPA domain signature 179 194 5.0E-8 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SMGD1_RS05335 70f84f14acde8839608a17ef5815ff68 251 Pfam PF02412 Thrombospondin type 3 repeat 80 99 0.0011 T 22-04-2016 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: REACT_16888 SMGD1_RS05335 70f84f14acde8839608a17ef5815ff68 251 Pfam PF02412 Thrombospondin type 3 repeat 109 130 0.002 T 22-04-2016 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: REACT_16888 SMGD1_RS05335 70f84f14acde8839608a17ef5815ff68 251 Gene3D G3DSA:4.10.1080.10 49 132 2.9E-15 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 SMGD1_RS05335 70f84f14acde8839608a17ef5815ff68 251 PANTHER PTHR30128:SF10 50 249 3.0E-43 T 22-04-2016 SMGD1_RS05335 70f84f14acde8839608a17ef5815ff68 251 SUPERFAMILY SSF103088 140 249 1.7E-33 T 22-04-2016 IPR006665 OmpA-like domain SMGD1_RS05335 70f84f14acde8839608a17ef5815ff68 251 SUPERFAMILY SSF103647 45 130 1.27E-20 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 SMGD1_RS05335 70f84f14acde8839608a17ef5815ff68 251 ProSitePatterns PS01068 OmpA-like domain. 181 225 - T 22-04-2016 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 SMGD1_RS05335 70f84f14acde8839608a17ef5815ff68 251 Gene3D G3DSA:3.30.1330.60 143 250 2.5E-34 T 22-04-2016 IPR006665 OmpA-like domain SMGD1_RS05335 70f84f14acde8839608a17ef5815ff68 251 Pfam PF00691 OmpA family 148 243 7.0E-20 T 22-04-2016 IPR006665 OmpA-like domain SMGD1_RS05335 70f84f14acde8839608a17ef5815ff68 251 PANTHER PTHR30128 50 249 3.0E-43 T 22-04-2016 SMGD1_RS04255 9e1a2e5daf34468fdb27c724f6a7fe2c 550 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 87 99 3.5E-16 T 22-04-2016 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 SMGD1_RS04255 9e1a2e5daf34468fdb27c724f6a7fe2c 550 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 355 369 3.5E-16 T 22-04-2016 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 SMGD1_RS04255 9e1a2e5daf34468fdb27c724f6a7fe2c 550 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 332 354 3.5E-16 T 22-04-2016 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 SMGD1_RS04255 9e1a2e5daf34468fdb27c724f6a7fe2c 550 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 128 147 3.5E-16 T 22-04-2016 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 SMGD1_RS04255 9e1a2e5daf34468fdb27c724f6a7fe2c 550 PANTHER PTHR13370 65 281 1.8E-18 T 22-04-2016 SMGD1_RS04255 9e1a2e5daf34468fdb27c724f6a7fe2c 550 PANTHER PTHR13370 306 418 1.8E-18 T 22-04-2016 SMGD1_RS04255 9e1a2e5daf34468fdb27c724f6a7fe2c 550 SUPERFAMILY SSF53335 63 259 1.15E-51 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS04255 9e1a2e5daf34468fdb27c724f6a7fe2c 550 SUPERFAMILY SSF53335 304 408 1.15E-51 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS04255 9e1a2e5daf34468fdb27c724f6a7fe2c 550 PIRSF PIRSF015855 1 529 3.3E-93 T 22-04-2016 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 SMGD1_RS04255 9e1a2e5daf34468fdb27c724f6a7fe2c 550 Gene3D G3DSA:3.40.50.150 65 218 2.0E-58 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS04255 9e1a2e5daf34468fdb27c724f6a7fe2c 550 Gene3D G3DSA:3.40.50.150 277 406 2.0E-58 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS04255 9e1a2e5daf34468fdb27c724f6a7fe2c 550 PANTHER PTHR13370:SF7 65 281 1.8E-18 T 22-04-2016 SMGD1_RS04255 9e1a2e5daf34468fdb27c724f6a7fe2c 550 PANTHER PTHR13370:SF7 306 418 1.8E-18 T 22-04-2016 SMGD1_RS04255 9e1a2e5daf34468fdb27c724f6a7fe2c 550 Pfam PF01555 DNA methylase 87 389 4.9E-39 T 22-04-2016 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 SMGD1_RS04255 9e1a2e5daf34468fdb27c724f6a7fe2c 550 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 90 96 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 SMGD1_RS11645 c24be11692ff000c64a894c3cf52967b 517 SUPERFAMILY SSF51735 287 412 2.17E-13 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS11645 c24be11692ff000c64a894c3cf52967b 517 PANTHER PTHR11537 119 266 2.1E-39 T 22-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 SMGD1_RS11645 c24be11692ff000c64a894c3cf52967b 517 PANTHER PTHR11537 15 87 2.1E-39 T 22-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 SMGD1_RS11645 c24be11692ff000c64a894c3cf52967b 517 Gene3D G3DSA:3.30.70.1450 452 509 2.4E-7 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SMGD1_RS11645 c24be11692ff000c64a894c3cf52967b 517 SUPERFAMILY SSF81324 34 87 8.24E-41 T 22-04-2016 SMGD1_RS11645 c24be11692ff000c64a894c3cf52967b 517 SUPERFAMILY SSF81324 121 267 8.24E-41 T 22-04-2016 SMGD1_RS11645 c24be11692ff000c64a894c3cf52967b 517 Gene3D G3DSA:3.40.50.720 280 400 3.1E-18 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS11645 c24be11692ff000c64a894c3cf52967b 517 PRINTS PR01333 Two pore domain K+ channel signature 484 493 1.9E-5 T 22-04-2016 IPR003280 Two pore domain potassium channel GO:0005267|GO:0016020|GO:0071805 SMGD1_RS11645 c24be11692ff000c64a894c3cf52967b 517 PRINTS PR01333 Two pore domain K+ channel signature 221 249 1.9E-5 T 22-04-2016 IPR003280 Two pore domain potassium channel GO:0005267|GO:0016020|GO:0071805 SMGD1_RS11645 c24be11692ff000c64a894c3cf52967b 517 PRINTS PR00169 Potassium channel signature 238 264 6.2E-18 T 22-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 SMGD1_RS11645 c24be11692ff000c64a894c3cf52967b 517 PRINTS PR00169 Potassium channel signature 149 175 6.2E-18 T 22-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 SMGD1_RS11645 c24be11692ff000c64a894c3cf52967b 517 PRINTS PR00169 Potassium channel signature 209 231 6.2E-18 T 22-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 SMGD1_RS11645 c24be11692ff000c64a894c3cf52967b 517 PRINTS PR00169 Potassium channel signature 178 201 6.2E-18 T 22-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 SMGD1_RS11645 c24be11692ff000c64a894c3cf52967b 517 PRINTS PR00169 Potassium channel signature 28 56 6.2E-18 T 22-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 SMGD1_RS11645 c24be11692ff000c64a894c3cf52967b 517 PANTHER PTHR11537:SF14 119 266 2.1E-39 T 22-04-2016 SMGD1_RS11645 c24be11692ff000c64a894c3cf52967b 517 PANTHER PTHR11537:SF14 15 87 2.1E-39 T 22-04-2016 SMGD1_RS11645 c24be11692ff000c64a894c3cf52967b 517 Pfam PF00520 Ion transport protein 35 266 1.8E-19 T 22-04-2016 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 SMGD1_RS11645 c24be11692ff000c64a894c3cf52967b 517 SUPERFAMILY SSF116726 451 504 3.66E-6 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SMGD1_RS11645 c24be11692ff000c64a894c3cf52967b 517 Gene3D G3DSA:1.10.287.70 119 267 9.9E-45 T 22-04-2016 SMGD1_RS11645 c24be11692ff000c64a894c3cf52967b 517 Gene3D G3DSA:1.10.287.70 34 87 9.9E-45 T 22-04-2016 SMGD1_RS11645 c24be11692ff000c64a894c3cf52967b 517 Pfam PF02254 TrkA-N domain 287 402 5.9E-11 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 SMGD1_RS08485 ecde604d93975167e0983a68a2738fff 297 SUPERFAMILY SSF52540 9 150 6.69E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS08485 ecde604d93975167e0983a68a2738fff 297 Gene3D G3DSA:3.40.50.300 5 170 5.0E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS08485 ecde604d93975167e0983a68a2738fff 297 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 7 297 22.374 T 22-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 SMGD1_RS08485 ecde604d93975167e0983a68a2738fff 297 PANTHER PTHR11088 1 275 1.0E-52 T 22-04-2016 SMGD1_RS08485 ecde604d93975167e0983a68a2738fff 297 Gene3D G3DSA:1.10.287.890 200 280 2.5E-20 T 22-04-2016 SMGD1_RS08485 ecde604d93975167e0983a68a2738fff 297 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 9 282 1.0E-74 T 22-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 SMGD1_RS08485 ecde604d93975167e0983a68a2738fff 297 PANTHER PTHR11088:SF25 1 275 1.0E-52 T 22-04-2016 SMGD1_RS08485 ecde604d93975167e0983a68a2738fff 297 Pfam PF01715 IPP transferase 41 280 3.0E-56 T 22-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 SMGD1_RS00055 4fa96815fb34c616efe752fa6eac085d 235 Gene3D G3DSA:3.40.50.1220 2 17 3.7E-26 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain SMGD1_RS00055 4fa96815fb34c616efe752fa6eac085d 235 Gene3D G3DSA:3.40.50.1220 65 109 3.7E-26 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain SMGD1_RS00055 4fa96815fb34c616efe752fa6eac085d 235 Gene3D G3DSA:3.40.50.1220 161 223 3.7E-26 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain SMGD1_RS00055 4fa96815fb34c616efe752fa6eac085d 235 PANTHER PTHR11085:SF17 3 180 7.4E-46 T 22-04-2016 SMGD1_RS00055 4fa96815fb34c616efe752fa6eac085d 235 SUPERFAMILY SSF52467 2 227 7.01E-57 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain SMGD1_RS00055 4fa96815fb34c616efe752fa6eac085d 235 Gene3D G3DSA:3.30.1600.10 110 153 2.8E-21 T 22-04-2016 IPR026591 Sirtuin family, catalytic core small domain SMGD1_RS00055 4fa96815fb34c616efe752fa6eac085d 235 Gene3D G3DSA:3.30.1600.10 18 57 2.8E-21 T 22-04-2016 IPR026591 Sirtuin family, catalytic core small domain SMGD1_RS00055 4fa96815fb34c616efe752fa6eac085d 235 Pfam PF02146 Sir2 family 9 181 4.4E-45 T 22-04-2016 IPR003000 Sirtuin family GO:0070403 SMGD1_RS00055 4fa96815fb34c616efe752fa6eac085d 235 PANTHER PTHR11085 3 180 7.4E-46 T 22-04-2016 IPR003000 Sirtuin family GO:0070403 SMGD1_RS14185 fbc7ac4b177f212b3fbb80fc1533bb85 195 Gene3D G3DSA:3.40.50.150 6 181 7.7E-26 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS14185 fbc7ac4b177f212b3fbb80fc1533bb85 195 Pfam PF03848 Tellurite resistance protein TehB 28 173 2.7E-18 T 22-04-2016 IPR015985 Tellurite resistance methyltransferase TehB-like domain SMGD1_RS14185 fbc7ac4b177f212b3fbb80fc1533bb85 195 PANTHER PTHR10108 40 109 5.4E-14 T 22-04-2016 SMGD1_RS14185 fbc7ac4b177f212b3fbb80fc1533bb85 195 SUPERFAMILY SSF53335 2 176 4.7E-27 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS14185 fbc7ac4b177f212b3fbb80fc1533bb85 195 PANTHER PTHR10108:SF927 40 109 5.4E-14 T 22-04-2016 SMGD1_RS09675 ad3f16cc1a1bb0ab0b578e71e9aa42b6 626 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 6 406 5.3E-68 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 SMGD1_RS09675 ad3f16cc1a1bb0ab0b578e71e9aa42b6 626 PRINTS PR01005 Flagellar hook-associated protein signature 52 74 3.4E-15 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 SMGD1_RS09675 ad3f16cc1a1bb0ab0b578e71e9aa42b6 626 PRINTS PR01005 Flagellar hook-associated protein signature 14 37 3.4E-15 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 SMGD1_RS09675 ad3f16cc1a1bb0ab0b578e71e9aa42b6 626 PRINTS PR01005 Flagellar hook-associated protein signature 127 147 3.4E-15 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 SMGD1_RS09675 ad3f16cc1a1bb0ab0b578e71e9aa42b6 626 PRINTS PR01005 Flagellar hook-associated protein signature 160 184 3.4E-15 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 SMGD1_RS09675 ad3f16cc1a1bb0ab0b578e71e9aa42b6 626 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 580 623 9.3E-13 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain SMGD1_RS09675 ad3f16cc1a1bb0ab0b578e71e9aa42b6 626 SUPERFAMILY SSF64518 466 623 4.18E-8 T 22-04-2016 SMGD1_RS09675 ad3f16cc1a1bb0ab0b578e71e9aa42b6 626 SUPERFAMILY SSF64518 356 377 4.18E-8 T 22-04-2016 SMGD1_RS09675 ad3f16cc1a1bb0ab0b578e71e9aa42b6 626 SUPERFAMILY SSF64518 122 308 4.18E-8 T 22-04-2016 SMGD1_RS09675 ad3f16cc1a1bb0ab0b578e71e9aa42b6 626 PANTHER PTHR30033 2 626 2.1E-56 T 22-04-2016 SMGD1_RS09675 ad3f16cc1a1bb0ab0b578e71e9aa42b6 626 PANTHER PTHR30033:SF1 2 626 2.1E-56 T 22-04-2016 SMGD1_RS12830 fa15f21055b06a9dbccdaadc0cd53267 288 Pfam PF02424 ApbE family 1 258 1.4E-47 T 22-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 SMGD1_RS12830 fa15f21055b06a9dbccdaadc0cd53267 288 SUPERFAMILY SSF143631 1 275 4.97E-47 T 22-04-2016 IPR003374 ApbE-like domain SMGD1_RS12830 fa15f21055b06a9dbccdaadc0cd53267 288 PANTHER PTHR30040 1 284 8.2E-38 T 22-04-2016 SMGD1_RS12830 fa15f21055b06a9dbccdaadc0cd53267 288 PANTHER PTHR30040:SF2 1 284 8.2E-38 T 22-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 SMGD1_RS01675 f33652fc5a7dd9a6a5ca72ea02754ebd 666 Gene3D G3DSA:3.30.450.20 388 483 5.8E-25 T 22-04-2016 SMGD1_RS01675 f33652fc5a7dd9a6a5ca72ea02754ebd 666 Pfam PF09084 NMT1/THI5 like 32 240 1.2E-48 T 22-04-2016 IPR015168 SsuA/THI5-like SMGD1_RS01675 f33652fc5a7dd9a6a5ca72ea02754ebd 666 SMART SM00086 443 485 3.9E-8 T 22-04-2016 IPR001610 PAC motif SMGD1_RS01675 f33652fc5a7dd9a6a5ca72ea02754ebd 666 Gene3D G3DSA:3.40.190.10 104 229 3.4E-9 T 22-04-2016 SMGD1_RS01675 f33652fc5a7dd9a6a5ca72ea02754ebd 666 Pfam PF00990 Diguanylate cyclase, GGDEF domain 510 663 1.5E-43 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS01675 f33652fc5a7dd9a6a5ca72ea02754ebd 666 PANTHER PTHR31528 5 325 1.8E-49 T 22-04-2016 IPR027939 NMT1/THI5 family GO:0009228 UniPathway: UPA00060 SMGD1_RS01675 f33652fc5a7dd9a6a5ca72ea02754ebd 666 SMART SM00267 499 666 1.4E-49 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS01675 f33652fc5a7dd9a6a5ca72ea02754ebd 666 SUPERFAMILY SSF53850 22 243 3.67E-26 T 22-04-2016 SMGD1_RS01675 f33652fc5a7dd9a6a5ca72ea02754ebd 666 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 387 490 1.1E-16 T 22-04-2016 IPR000014 PAS domain SMGD1_RS01675 f33652fc5a7dd9a6a5ca72ea02754ebd 666 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 506 665 3.3E-49 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS01675 f33652fc5a7dd9a6a5ca72ea02754ebd 666 SUPERFAMILY SSF55785 386 482 3.66E-27 T 22-04-2016 IPR000014 PAS domain SMGD1_RS01675 f33652fc5a7dd9a6a5ca72ea02754ebd 666 SUPERFAMILY SSF55073 515 664 7.85E-44 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS01675 f33652fc5a7dd9a6a5ca72ea02754ebd 666 Gene3D G3DSA:3.30.70.270 512 665 5.3E-45 T 22-04-2016 SMGD1_RS01675 f33652fc5a7dd9a6a5ca72ea02754ebd 666 Pfam PF00989 PAS fold 388 478 5.5E-14 T 22-04-2016 IPR013767 PAS fold GO:0006355 SMGD1_RS06250 eb2db8d2b88c27b962e0074bcc04bb5d 318 Pfam PF01814 Hemerythrin HHE cation binding domain 8 128 3.9E-13 T 22-04-2016 IPR012312 Haemerythrin-like SMGD1_RS06250 eb2db8d2b88c27b962e0074bcc04bb5d 318 PANTHER PTHR24423:SF558 55 150 1.2E-37 T 22-04-2016 SMGD1_RS06250 eb2db8d2b88c27b962e0074bcc04bb5d 318 PANTHER PTHR24423:SF558 194 318 1.2E-37 T 22-04-2016 SMGD1_RS06250 eb2db8d2b88c27b962e0074bcc04bb5d 318 Gene3D G3DSA:3.30.450.20 198 317 1.6E-41 T 22-04-2016 SMGD1_RS06250 eb2db8d2b88c27b962e0074bcc04bb5d 318 Pfam PF13596 PAS domain 198 303 1.9E-27 T 22-04-2016 SMGD1_RS06250 eb2db8d2b88c27b962e0074bcc04bb5d 318 Gene3D G3DSA:1.20.120.520 3 197 1.3E-43 T 22-04-2016 SMGD1_RS06250 eb2db8d2b88c27b962e0074bcc04bb5d 318 SUPERFAMILY SSF55785 197 303 1.22E-8 T 22-04-2016 IPR000014 PAS domain SMGD1_RS06250 eb2db8d2b88c27b962e0074bcc04bb5d 318 PANTHER PTHR24423 55 150 1.2E-37 T 22-04-2016 SMGD1_RS06250 eb2db8d2b88c27b962e0074bcc04bb5d 318 PANTHER PTHR24423 194 318 1.2E-37 T 22-04-2016 SMGD1_RS12910 6a0ec4456bf26c992f41b13468c9586d 367 PANTHER PTHR11938 1 365 3.8E-145 T 22-04-2016 SMGD1_RS12910 6a0ec4456bf26c992f41b13468c9586d 367 PANTHER PTHR11938:SF1 1 365 3.8E-145 T 22-04-2016 SMGD1_RS12910 6a0ec4456bf26c992f41b13468c9586d 367 Gene3D G3DSA:3.20.20.70 1 96 6.1E-23 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMGD1_RS12910 6a0ec4456bf26c992f41b13468c9586d 367 SUPERFAMILY SSF51395 1 72 8.88E-18 T 22-04-2016 SMGD1_RS12910 6a0ec4456bf26c992f41b13468c9586d 367 Pfam PF01493 GXGXG motif 129 310 3.2E-70 T 22-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 SMGD1_RS12910 6a0ec4456bf26c992f41b13468c9586d 367 SUPERFAMILY SSF69336 108 358 2.22E-79 T 22-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 SMGD1_RS12910 6a0ec4456bf26c992f41b13468c9586d 367 Gene3D G3DSA:2.160.20.60 109 358 2.6E-85 T 22-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 SMGD1_RS12910 6a0ec4456bf26c992f41b13468c9586d 367 Pfam PF01645 Conserved region in glutamate synthase 1 53 2.8E-14 T 22-04-2016 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 SMGD1_RS03755 70a877f39ef64c4689281ad7453113ec 296 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 48 67 1.6E-17 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SMGD1_RS03755 70a877f39ef64c4689281ad7453113ec 296 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 258 281 1.6E-17 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SMGD1_RS03755 70a877f39ef64c4689281ad7453113ec 296 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 246 255 1.6E-17 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SMGD1_RS03755 70a877f39ef64c4689281ad7453113ec 296 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 132 143 1.6E-17 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SMGD1_RS03755 70a877f39ef64c4689281ad7453113ec 296 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 2 145 9.5E-39 T 22-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 SMGD1_RS03755 70a877f39ef64c4689281ad7453113ec 296 PRINTS PR00101 Aspartate carbamoyltransferase signature 76 85 4.2E-31 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 SMGD1_RS03755 70a877f39ef64c4689281ad7453113ec 296 PRINTS PR00101 Aspartate carbamoyltransferase signature 274 288 4.2E-31 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 SMGD1_RS03755 70a877f39ef64c4689281ad7453113ec 296 PRINTS PR00101 Aspartate carbamoyltransferase signature 211 220 4.2E-31 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 SMGD1_RS03755 70a877f39ef64c4689281ad7453113ec 296 PRINTS PR00101 Aspartate carbamoyltransferase signature 38 60 4.2E-31 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 SMGD1_RS03755 70a877f39ef64c4689281ad7453113ec 296 PRINTS PR00101 Aspartate carbamoyltransferase signature 250 255 4.2E-31 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 SMGD1_RS03755 70a877f39ef64c4689281ad7453113ec 296 PRINTS PR00101 Aspartate carbamoyltransferase signature 131 148 4.2E-31 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 SMGD1_RS03755 70a877f39ef64c4689281ad7453113ec 296 PANTHER PTHR11405 1 292 2.4E-106 T 22-04-2016 SMGD1_RS03755 70a877f39ef64c4689281ad7453113ec 296 Gene3D G3DSA:3.40.50.1370 1 143 7.1E-48 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SMGD1_RS03755 70a877f39ef64c4689281ad7453113ec 296 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 2 293 4.4E-99 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 SMGD1_RS03755 70a877f39ef64c4689281ad7453113ec 296 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 48 55 - T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SMGD1_RS03755 70a877f39ef64c4689281ad7453113ec 296 SUPERFAMILY SSF53671 1 294 9.17E-88 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SMGD1_RS03755 70a877f39ef64c4689281ad7453113ec 296 Gene3D G3DSA:3.40.50.1370 144 271 3.1E-42 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SMGD1_RS03755 70a877f39ef64c4689281ad7453113ec 296 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 1 295 38.242 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 SMGD1_RS03755 70a877f39ef64c4689281ad7453113ec 296 PANTHER PTHR11405:SF16 1 292 2.4E-106 T 22-04-2016 SMGD1_RS03755 70a877f39ef64c4689281ad7453113ec 296 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 151 290 1.8E-22 T 22-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 SMGD1_RS12525 38209e7f501feb24ce56002d41cf9002 470 PANTHER PTHR23115 10 51 1.3E-72 T 22-04-2016 SMGD1_RS12525 38209e7f501feb24ce56002d41cf9002 470 PANTHER PTHR23115 73 352 1.3E-72 T 22-04-2016 SMGD1_RS12525 38209e7f501feb24ce56002d41cf9002 470 Gene3D G3DSA:3.40.50.300 5 233 1.2E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS12525 38209e7f501feb24ce56002d41cf9002 470 Gene3D G3DSA:2.40.30.10 328 433 8.0E-7 T 22-04-2016 SMGD1_RS12525 38209e7f501feb24ce56002d41cf9002 470 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 80 95 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site SMGD1_RS12525 38209e7f501feb24ce56002d41cf9002 470 SUPERFAMILY SSF50465 331 432 1.39E-30 T 22-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal SMGD1_RS12525 38209e7f501feb24ce56002d41cf9002 470 SUPERFAMILY SSF50447 242 326 1.5E-23 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain SMGD1_RS12525 38209e7f501feb24ce56002d41cf9002 470 SUPERFAMILY SSF52540 18 234 1.88E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS12525 38209e7f501feb24ce56002d41cf9002 470 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 25 431 3.1E-195 T 22-04-2016 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 SMGD1_RS12525 38209e7f501feb24ce56002d41cf9002 470 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 16 469 52.44 T 22-04-2016 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 SMGD1_RS12525 38209e7f501feb24ce56002d41cf9002 470 PRINTS PR00315 GTP-binding elongation factor signature 87 95 6.8E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMGD1_RS12525 38209e7f501feb24ce56002d41cf9002 470 PRINTS PR00315 GTP-binding elongation factor signature 26 39 6.8E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMGD1_RS12525 38209e7f501feb24ce56002d41cf9002 470 PRINTS PR00315 GTP-binding elongation factor signature 107 117 6.8E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMGD1_RS12525 38209e7f501feb24ce56002d41cf9002 470 PRINTS PR00315 GTP-binding elongation factor signature 123 134 6.8E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMGD1_RS12525 38209e7f501feb24ce56002d41cf9002 470 PRINTS PR00315 GTP-binding elongation factor signature 160 169 6.8E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMGD1_RS12525 38209e7f501feb24ce56002d41cf9002 470 Pfam PF00009 Elongation factor Tu GTP binding domain 23 213 3.3E-44 T 22-04-2016 SMGD1_RS12525 38209e7f501feb24ce56002d41cf9002 470 Gene3D G3DSA:2.40.30.10 242 325 1.7E-16 T 22-04-2016 SMGD1_RS12525 38209e7f501feb24ce56002d41cf9002 470 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 31 213 3.0E-13 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SMGD1_RS11455 62d0cba3726926a69fb6080d53fef4fa 238 PANTHER PTHR23088:SF33 29 226 3.7E-39 T 22-04-2016 SMGD1_RS11455 62d0cba3726926a69fb6080d53fef4fa 238 SUPERFAMILY SSF56317 1 235 1.7E-43 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 SMGD1_RS11455 62d0cba3726926a69fb6080d53fef4fa 238 PANTHER PTHR23088 29 226 3.7E-39 T 22-04-2016 SMGD1_RS11455 62d0cba3726926a69fb6080d53fef4fa 238 Pfam PF00795 Carbon-nitrogen hydrolase 3 233 2.8E-19 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 SMGD1_RS11455 62d0cba3726926a69fb6080d53fef4fa 238 Gene3D G3DSA:3.60.110.10 1 237 9.4E-45 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 SMGD1_RS06715 52ddc9e114ca94e9a740046d387bfc27 243 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMGD1_RS06715 52ddc9e114ca94e9a740046d387bfc27 243 PANTHER PTHR24220:SF582 3 241 5.3E-53 T 22-04-2016 SMGD1_RS06715 52ddc9e114ca94e9a740046d387bfc27 243 PANTHER PTHR24220 3 241 5.3E-53 T 22-04-2016 SMGD1_RS06715 52ddc9e114ca94e9a740046d387bfc27 243 Gene3D G3DSA:3.40.50.300 1 228 1.4E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS06715 52ddc9e114ca94e9a740046d387bfc27 243 SMART SM00382 24 211 4.2E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain SMGD1_RS06715 52ddc9e114ca94e9a740046d387bfc27 243 SUPERFAMILY SSF52540 1 210 2.66E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS06715 52ddc9e114ca94e9a740046d387bfc27 243 Pfam PF00005 ABC transporter 20 164 8.3E-24 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMGD1_RS05770 c5d4bf55480db0789d3c86e1efda6a89 190 Gene3D G3DSA:3.90.550.10 3 189 3.1E-41 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMGD1_RS05770 c5d4bf55480db0789d3c86e1efda6a89 190 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 2 186 20.669 T 22-04-2016 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 MetaCyc: PWY-5964|MetaCyc: PWY-7639 SMGD1_RS05770 c5d4bf55480db0789d3c86e1efda6a89 190 SUPERFAMILY SSF53448 1 185 1.76E-24 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMGD1_RS05770 c5d4bf55480db0789d3c86e1efda6a89 190 PANTHER PTHR19136 1 186 1.5E-22 T 22-04-2016 SMGD1_RS05770 c5d4bf55480db0789d3c86e1efda6a89 190 PANTHER PTHR19136:SF81 1 186 1.5E-22 T 22-04-2016 SMGD1_RS05770 c5d4bf55480db0789d3c86e1efda6a89 190 Pfam PF12804 MobA-like NTP transferase domain 6 149 1.3E-17 T 22-04-2016 IPR025877 MobA-like NTP transferase SMGD1_RS13570 dd1a6ca9c267d95d67a4ecf300df6341 585 PANTHER PTHR22594 2 298 2.6E-237 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMGD1_RS13570 dd1a6ca9c267d95d67a4ecf300df6341 585 Hamap MF_00044 Aspartate--tRNA(Asp) ligase [aspS]. 1 559 35.133 T 22-04-2016 SMGD1_RS13570 dd1a6ca9c267d95d67a4ecf300df6341 585 Gene3D G3DSA:3.30.930.10 135 277 6.9E-116 T 22-04-2016 SMGD1_RS13570 dd1a6ca9c267d95d67a4ecf300df6341 585 Gene3D G3DSA:3.30.930.10 411 581 6.9E-116 T 22-04-2016 SMGD1_RS13570 dd1a6ca9c267d95d67a4ecf300df6341 585 Pfam PF00152 tRNA synthetases class II (D, K and N) 120 554 1.2E-110 T 22-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMGD1_RS13570 dd1a6ca9c267d95d67a4ecf300df6341 585 SUPERFAMILY SSF55261 290 415 2.78E-33 T 22-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 SMGD1_RS13570 dd1a6ca9c267d95d67a4ecf300df6341 585 Pfam PF01336 OB-fold nucleic acid binding domain 18 100 4.6E-13 T 22-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 SMGD1_RS13570 dd1a6ca9c267d95d67a4ecf300df6341 585 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 2 578 1.1E-237 T 22-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 SMGD1_RS13570 dd1a6ca9c267d95d67a4ecf300df6341 585 Gene3D G3DSA:3.30.1360.30 278 410 2.3E-41 T 22-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 SMGD1_RS13570 dd1a6ca9c267d95d67a4ecf300df6341 585 Gene3D G3DSA:2.40.50.140 2 107 5.6E-32 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMGD1_RS13570 dd1a6ca9c267d95d67a4ecf300df6341 585 PANTHER PTHR22594:SF5 2 298 2.6E-237 T 22-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 SMGD1_RS13570 dd1a6ca9c267d95d67a4ecf300df6341 585 PANTHER PTHR22594:SF5 369 567 2.6E-237 T 22-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 SMGD1_RS13570 dd1a6ca9c267d95d67a4ecf300df6341 585 Pfam PF02938 GAD domain 319 405 6.6E-22 T 22-04-2016 IPR029351 GAD domain SMGD1_RS13570 dd1a6ca9c267d95d67a4ecf300df6341 585 PRINTS PR01042 Aspartyl-tRNA synthetase signature 470 486 6.9E-27 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMGD1_RS13570 dd1a6ca9c267d95d67a4ecf300df6341 585 PRINTS PR01042 Aspartyl-tRNA synthetase signature 209 222 6.9E-27 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMGD1_RS13570 dd1a6ca9c267d95d67a4ecf300df6341 585 PRINTS PR01042 Aspartyl-tRNA synthetase signature 514 528 6.9E-27 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMGD1_RS13570 dd1a6ca9c267d95d67a4ecf300df6341 585 PRINTS PR01042 Aspartyl-tRNA synthetase signature 192 204 6.9E-27 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMGD1_RS13570 dd1a6ca9c267d95d67a4ecf300df6341 585 SUPERFAMILY SSF50249 1 106 1.01E-28 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMGD1_RS13570 dd1a6ca9c267d95d67a4ecf300df6341 585 SUPERFAMILY SSF55681 120 312 5.77E-105 T 22-04-2016 SMGD1_RS13570 dd1a6ca9c267d95d67a4ecf300df6341 585 SUPERFAMILY SSF55681 406 554 5.77E-105 T 22-04-2016 SMGD1_RS13570 dd1a6ca9c267d95d67a4ecf300df6341 585 PANTHER PTHR22594 369 567 2.6E-237 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMGD1_RS09175 c965d0a15df2ac6cb0b0996158c4bac3 295 PANTHER PTHR30606 1 286 9.6E-55 T 22-04-2016 SMGD1_RS09175 c965d0a15df2ac6cb0b0996158c4bac3 295 PIRSF PIRSF026649 1 293 2.6E-62 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 SMGD1_RS09175 c965d0a15df2ac6cb0b0996158c4bac3 295 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 4 286 4.9E-52 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 SMGD1_RS12270 9ffbf32965b70c8602349a9fc63ad77d 719 Gene3D G3DSA:3.30.70.270 323 469 4.6E-21 T 22-04-2016 SMGD1_RS12270 9ffbf32965b70c8602349a9fc63ad77d 719 SUPERFAMILY SSF141868 485 715 2.48E-54 T 22-04-2016 IPR001633 EAL domain SMGD1_RS12270 9ffbf32965b70c8602349a9fc63ad77d 719 Pfam PF13426 PAS domain 207 309 4.2E-15 T 22-04-2016 IPR000014 PAS domain SMGD1_RS12270 9ffbf32965b70c8602349a9fc63ad77d 719 SUPERFAMILY SSF55073 326 467 2.43E-22 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS12270 9ffbf32965b70c8602349a9fc63ad77d 719 SMART SM00052 479 718 3.0E-38 T 22-04-2016 IPR001633 EAL domain SMGD1_RS12270 9ffbf32965b70c8602349a9fc63ad77d 719 Gene3D G3DSA:3.20.20.450 485 715 5.2E-53 T 22-04-2016 IPR001633 EAL domain SMGD1_RS12270 9ffbf32965b70c8602349a9fc63ad77d 719 SMART SM00091 196 262 1.3E-7 T 22-04-2016 IPR000014 PAS domain SMGD1_RS12270 9ffbf32965b70c8602349a9fc63ad77d 719 Pfam PF00990 Diguanylate cyclase, GGDEF domain 321 461 2.7E-16 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS12270 9ffbf32965b70c8602349a9fc63ad77d 719 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 194 316 3.8E-21 T 22-04-2016 IPR000014 PAS domain SMGD1_RS12270 9ffbf32965b70c8602349a9fc63ad77d 719 Gene3D G3DSA:3.30.450.40 27 194 5.4E-13 T 22-04-2016 IPR029016 GAF domain-like SMGD1_RS12270 9ffbf32965b70c8602349a9fc63ad77d 719 SMART SM00086 268 310 0.0013 T 22-04-2016 IPR001610 PAC motif SMGD1_RS12270 9ffbf32965b70c8602349a9fc63ad77d 719 Gene3D G3DSA:3.30.450.20 204 309 1.6E-25 T 22-04-2016 SMGD1_RS12270 9ffbf32965b70c8602349a9fc63ad77d 719 SUPERFAMILY SSF55781 25 187 1.86E-18 T 22-04-2016 IPR029016 GAF domain-like SMGD1_RS12270 9ffbf32965b70c8602349a9fc63ad77d 719 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 318 464 3.2E-15 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS12270 9ffbf32965b70c8602349a9fc63ad77d 719 PANTHER PTHR33121:SF10 481 715 4.3E-45 T 22-04-2016 SMGD1_RS12270 9ffbf32965b70c8602349a9fc63ad77d 719 Pfam PF13185 GAF domain 47 185 2.9E-9 T 22-04-2016 IPR003018 GAF domain GO:0005515 SMGD1_RS12270 9ffbf32965b70c8602349a9fc63ad77d 719 PANTHER PTHR33121 481 715 4.3E-45 T 22-04-2016 SMGD1_RS12270 9ffbf32965b70c8602349a9fc63ad77d 719 SMART SM00267 310 465 6.1E-19 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS12270 9ffbf32965b70c8602349a9fc63ad77d 719 SUPERFAMILY SSF55785 204 306 6.11E-24 T 22-04-2016 IPR000014 PAS domain SMGD1_RS12270 9ffbf32965b70c8602349a9fc63ad77d 719 Pfam PF00563 EAL domain 487 713 4.6E-51 T 22-04-2016 IPR001633 EAL domain SMGD1_RS03500 bd76ae1c6ecdab43c66791c87de0ae49 187 SUPERFAMILY SSF51064 138 186 2.62E-15 T 22-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 SMGD1_RS03500 bd76ae1c6ecdab43c66791c87de0ae49 187 Gene3D G3DSA:3.90.20.20 29 131 6.1E-26 T 22-04-2016 IPR013805 GrpE nucleotide exchange factor, coiled-coil SMGD1_RS03500 bd76ae1c6ecdab43c66791c87de0ae49 187 SUPERFAMILY SSF58014 32 132 8.37E-24 T 22-04-2016 SMGD1_RS03500 bd76ae1c6ecdab43c66791c87de0ae49 187 Hamap MF_01151 Protein GrpE [grpE]. 6 187 19.369 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 SMGD1_RS03500 bd76ae1c6ecdab43c66791c87de0ae49 187 PRINTS PR00773 GrpE protein signature 54 70 4.7E-22 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 SMGD1_RS03500 bd76ae1c6ecdab43c66791c87de0ae49 187 PRINTS PR00773 GrpE protein signature 82 97 4.7E-22 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 SMGD1_RS03500 bd76ae1c6ecdab43c66791c87de0ae49 187 PRINTS PR00773 GrpE protein signature 166 185 4.7E-22 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 SMGD1_RS03500 bd76ae1c6ecdab43c66791c87de0ae49 187 PRINTS PR00773 GrpE protein signature 139 154 4.7E-22 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 SMGD1_RS03500 bd76ae1c6ecdab43c66791c87de0ae49 187 Gene3D G3DSA:2.30.22.10 138 186 4.7E-20 T 22-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 SMGD1_RS03500 bd76ae1c6ecdab43c66791c87de0ae49 187 PANTHER PTHR21237 1 186 4.3E-45 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 SMGD1_RS03500 bd76ae1c6ecdab43c66791c87de0ae49 187 ProSitePatterns PS01071 grpE protein signature. 142 185 - T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 SMGD1_RS03500 bd76ae1c6ecdab43c66791c87de0ae49 187 Pfam PF01025 GrpE 23 186 1.0E-45 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 SMGD1_RS12115 789e56c88e83becb9a71b7add89620fa 440 TIGRFAM TIGR01109 Na_pump_decarbB: sodium ion-translocating decarboxylase, beta subunit 82 434 1.9E-163 T 22-04-2016 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 SMGD1_RS12115 789e56c88e83becb9a71b7add89620fa 440 PIRSF PIRSF015658 63 440 1.7E-167 T 22-04-2016 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 SMGD1_RS12115 789e56c88e83becb9a71b7add89620fa 440 Pfam PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit 83 439 2.5E-153 T 22-04-2016 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 SMGD1_RS12115 789e56c88e83becb9a71b7add89620fa 440 PANTHER PTHR35806 57 440 2.8E-178 T 22-04-2016 SMGD1_RS08265 0f24b5b089ee117d28ea6265b9f41b39 190 Pfam PF01871 AMMECR1 22 179 1.8E-39 T 22-04-2016 IPR002733 AMMECR1 domain SMGD1_RS08265 0f24b5b089ee117d28ea6265b9f41b39 190 TIGRFAM TIGR04335 AmmeMemoSam_A: AmmeMemoRadiSam system protein A 5 179 2.1E-58 T 22-04-2016 IPR027623 AmmeMemoRadiSam system protein A SMGD1_RS08265 0f24b5b089ee117d28ea6265b9f41b39 190 TIGRFAM TIGR00296 TIGR00296: uncharacterized protein, PH0010 family 8 184 8.2E-33 T 22-04-2016 IPR023473 AMMECR1 SMGD1_RS08265 0f24b5b089ee117d28ea6265b9f41b39 190 PANTHER PTHR13016 43 185 1.3E-22 T 22-04-2016 IPR023473 AMMECR1 SMGD1_RS08265 0f24b5b089ee117d28ea6265b9f41b39 190 Gene3D G3DSA:3.30.700.20 4 119 3.0E-33 T 22-04-2016 IPR027485 AMMECR1, N-terminal SMGD1_RS08265 0f24b5b089ee117d28ea6265b9f41b39 190 SUPERFAMILY SSF143447 4 187 6.41E-54 T 22-04-2016 IPR002733 AMMECR1 domain SMGD1_RS08265 0f24b5b089ee117d28ea6265b9f41b39 190 Gene3D G3DSA:3.30.1490.150 120 175 1.4E-20 T 22-04-2016 SMGD1_RS11815 10b936ebe28fa0bf2767344928296a0c 620 SUPERFAMILY SSF55073 470 619 1.18E-36 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS11815 10b936ebe28fa0bf2767344928296a0c 620 SMART SM00267 455 620 1.6E-42 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS11815 10b936ebe28fa0bf2767344928296a0c 620 Pfam PF14827 Double sensory domain of two-component sensor kinase 49 279 6.9E-14 T 22-04-2016 IPR029150 Double Cache domain 3 SMGD1_RS11815 10b936ebe28fa0bf2767344928296a0c 620 PANTHER PTHR10799:SF728 496 619 3.0E-16 T 22-04-2016 SMGD1_RS11815 10b936ebe28fa0bf2767344928296a0c 620 PANTHER PTHR10799:SF728 1 8 3.0E-16 T 22-04-2016 SMGD1_RS11815 10b936ebe28fa0bf2767344928296a0c 620 PANTHER PTHR10799 496 619 3.0E-16 T 22-04-2016 SMGD1_RS11815 10b936ebe28fa0bf2767344928296a0c 620 PANTHER PTHR10799 1 8 3.0E-16 T 22-04-2016 SMGD1_RS11815 10b936ebe28fa0bf2767344928296a0c 620 Pfam PF00990 Diguanylate cyclase, GGDEF domain 466 616 1.3E-40 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS11815 10b936ebe28fa0bf2767344928296a0c 620 SUPERFAMILY SSF103190 78 180 3.34E-6 T 22-04-2016 IPR029151 Periplasmic sensor domain-like SMGD1_RS11815 10b936ebe28fa0bf2767344928296a0c 620 Gene3D G3DSA:3.30.70.270 466 619 2.8E-42 T 22-04-2016 SMGD1_RS11815 10b936ebe28fa0bf2767344928296a0c 620 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 461 618 1.5E-39 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS11325 7c0eba93d6eceeb12c590375c5a55d55 548 Gene3D G3DSA:3.40.50.170 36 162 1.6E-16 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SMGD1_RS11325 7c0eba93d6eceeb12c590375c5a55d55 548 Pfam PF00378 Enoyl-CoA hydratase/isomerase 306 482 2.9E-21 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 SMGD1_RS11325 7c0eba93d6eceeb12c590375c5a55d55 548 Gene3D G3DSA:3.10.25.10 171 261 7.7E-6 T 22-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SMGD1_RS11325 7c0eba93d6eceeb12c590375c5a55d55 548 SUPERFAMILY SSF50486 168 255 6.28E-9 T 22-04-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 SMGD1_RS11325 7c0eba93d6eceeb12c590375c5a55d55 548 Gene3D G3DSA:3.90.226.10 277 482 1.7E-26 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SMGD1_RS11325 7c0eba93d6eceeb12c590375c5a55d55 548 PANTHER PTHR11138:SF1 301 543 2.7E-146 T 22-04-2016 SMGD1_RS11325 7c0eba93d6eceeb12c590375c5a55d55 548 PANTHER PTHR11138:SF1 3 247 2.7E-146 T 22-04-2016 SMGD1_RS11325 7c0eba93d6eceeb12c590375c5a55d55 548 PIRSF PIRSF006787 1 548 2.9E-177 T 22-04-2016 IPR009188 [NiFe]-hydrogenase maturation factor, HypX/HoxX type SMGD1_RS11325 7c0eba93d6eceeb12c590375c5a55d55 548 Pfam PF02911 Formyl transferase, C-terminal domain 168 256 3.4E-7 T 22-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SMGD1_RS11325 7c0eba93d6eceeb12c590375c5a55d55 548 SUPERFAMILY SSF53328 4 159 1.09E-20 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SMGD1_RS11325 7c0eba93d6eceeb12c590375c5a55d55 548 Pfam PF00551 Formyl transferase 35 142 2.0E-8 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SMGD1_RS11325 7c0eba93d6eceeb12c590375c5a55d55 548 PANTHER PTHR11138 301 543 2.7E-146 T 22-04-2016 SMGD1_RS11325 7c0eba93d6eceeb12c590375c5a55d55 548 PANTHER PTHR11138 3 247 2.7E-146 T 22-04-2016 SMGD1_RS11325 7c0eba93d6eceeb12c590375c5a55d55 548 SUPERFAMILY SSF52096 287 481 8.14E-33 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SMGD1_RS01910 88b8a70759456c42091175c160cdafbc 722 PANTHER PTHR30161:SF1 354 722 2.6E-304 T 22-04-2016 SMGD1_RS01910 88b8a70759456c42091175c160cdafbc 722 Pfam PF00771 FHIPEP family 33 710 1.2E-250 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 SMGD1_RS01910 88b8a70759456c42091175c160cdafbc 722 PANTHER PTHR30161 354 722 2.6E-304 T 22-04-2016 SMGD1_RS01910 88b8a70759456c42091175c160cdafbc 722 PANTHER PTHR30161:SF1 5 335 2.6E-304 T 22-04-2016 SMGD1_RS01910 88b8a70759456c42091175c160cdafbc 722 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 22 719 5.8E-273 T 22-04-2016 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 SMGD1_RS01910 88b8a70759456c42091175c160cdafbc 722 PIRSF PIRSF005419 6 722 1.5E-238 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 SMGD1_RS01910 88b8a70759456c42091175c160cdafbc 722 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 144 160 2.8E-53 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 SMGD1_RS01910 88b8a70759456c42091175c160cdafbc 722 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 244 258 2.8E-53 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 SMGD1_RS01910 88b8a70759456c42091175c160cdafbc 722 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 163 181 2.8E-53 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 SMGD1_RS01910 88b8a70759456c42091175c160cdafbc 722 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 77 96 2.8E-53 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 SMGD1_RS01910 88b8a70759456c42091175c160cdafbc 722 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 40 53 2.8E-53 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 SMGD1_RS01910 88b8a70759456c42091175c160cdafbc 722 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 193 210 2.8E-53 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 SMGD1_RS01910 88b8a70759456c42091175c160cdafbc 722 PANTHER PTHR30161 5 335 2.6E-304 T 22-04-2016 SMGD1_RS00885 6dec79f68a14a1ddd6f357526677f6a2 66 PANTHER PTHR34472 1 66 3.0E-21 T 22-04-2016 SMGD1_RS00885 6dec79f68a14a1ddd6f357526677f6a2 66 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 3 66 1.7E-21 T 22-04-2016 IPR010035 ThiS, thiamine-biosynthesis SMGD1_RS00885 6dec79f68a14a1ddd6f357526677f6a2 66 Gene3D G3DSA:3.10.20.30 2 66 4.7E-23 T 22-04-2016 IPR012675 Beta-grasp domain SMGD1_RS00885 6dec79f68a14a1ddd6f357526677f6a2 66 Pfam PF02597 ThiS family 3 66 4.8E-15 T 22-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 SMGD1_RS00885 6dec79f68a14a1ddd6f357526677f6a2 66 PANTHER PTHR34472:SF1 1 66 3.0E-21 T 22-04-2016 SMGD1_RS00885 6dec79f68a14a1ddd6f357526677f6a2 66 SUPERFAMILY SSF54285 1 66 9.45E-18 T 22-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp SMGD1_RS01185 a06f36fc3b6cf6a03e47c65d892f7777 903 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 88 351 4.0E-47 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 SMGD1_RS01185 a06f36fc3b6cf6a03e47c65d892f7777 903 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 608 733 1.9E-34 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 SMGD1_RS01185 a06f36fc3b6cf6a03e47c65d892f7777 903 SUPERFAMILY SSF81653 121 228 3.4E-29 T 22-04-2016 SMGD1_RS01185 a06f36fc3b6cf6a03e47c65d892f7777 903 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 492 510 8.5E-18 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 SMGD1_RS01185 a06f36fc3b6cf6a03e47c65d892f7777 903 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 613 629 8.5E-18 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 SMGD1_RS01185 a06f36fc3b6cf6a03e47c65d892f7777 903 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 673 698 8.5E-18 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 SMGD1_RS01185 a06f36fc3b6cf6a03e47c65d892f7777 903 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 641 657 8.5E-18 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 SMGD1_RS01185 a06f36fc3b6cf6a03e47c65d892f7777 903 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 331 337 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site SMGD1_RS01185 a06f36fc3b6cf6a03e47c65d892f7777 903 Pfam PF00689 Cation transporting ATPase, C-terminus 726 897 9.9E-40 T 22-04-2016 IPR006068 Cation-transporting P-type ATPase, C-terminal SMGD1_RS01185 a06f36fc3b6cf6a03e47c65d892f7777 903 SUPERFAMILY SSF81660 336 538 3.49E-51 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 SMGD1_RS01185 a06f36fc3b6cf6a03e47c65d892f7777 903 Pfam PF00702 haloacid dehalogenase-like hydrolase 327 655 4.5E-18 T 22-04-2016 SMGD1_RS01185 a06f36fc3b6cf6a03e47c65d892f7777 903 Gene3D G3DSA:1.20.1110.10 610 899 3.8E-105 T 22-04-2016 IPR023298 P-type ATPase, transmembrane domain SMGD1_RS01185 a06f36fc3b6cf6a03e47c65d892f7777 903 Gene3D G3DSA:1.20.1110.10 62 114 3.8E-105 T 22-04-2016 IPR023298 P-type ATPase, transmembrane domain SMGD1_RS01185 a06f36fc3b6cf6a03e47c65d892f7777 903 SMART SM00831 8 82 4.8E-22 T 22-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal SMGD1_RS01185 a06f36fc3b6cf6a03e47c65d892f7777 903 SUPERFAMILY SSF56784 327 347 1.39E-58 T 22-04-2016 IPR023214 HAD-like domain SMGD1_RS01185 a06f36fc3b6cf6a03e47c65d892f7777 903 SUPERFAMILY SSF56784 489 744 1.39E-58 T 22-04-2016 IPR023214 HAD-like domain SMGD1_RS01185 a06f36fc3b6cf6a03e47c65d892f7777 903 Gene3D G3DSA:3.40.1110.10 319 541 5.9E-57 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 SMGD1_RS01185 a06f36fc3b6cf6a03e47c65d892f7777 903 SUPERFAMILY SSF81665 230 323 2.09E-114 T 22-04-2016 SMGD1_RS01185 a06f36fc3b6cf6a03e47c65d892f7777 903 SUPERFAMILY SSF81665 8 120 2.09E-114 T 22-04-2016 SMGD1_RS01185 a06f36fc3b6cf6a03e47c65d892f7777 903 SUPERFAMILY SSF81665 691 901 2.09E-114 T 22-04-2016 SMGD1_RS01185 a06f36fc3b6cf6a03e47c65d892f7777 903 Pfam PF00690 Cation transporter/ATPase, N-terminus 9 76 6.6E-16 T 22-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal SMGD1_RS01185 a06f36fc3b6cf6a03e47c65d892f7777 903 Gene3D G3DSA:2.70.150.10 23 61 5.8E-42 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SMGD1_RS01185 a06f36fc3b6cf6a03e47c65d892f7777 903 Gene3D G3DSA:2.70.150.10 115 229 5.8E-42 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SMGD1_RS01185 a06f36fc3b6cf6a03e47c65d892f7777 903 Pfam PF00122 E1-E2 ATPase 88 320 4.6E-64 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SMGD1_RS01185 a06f36fc3b6cf6a03e47c65d892f7777 903 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 534 545 2.7E-41 T 22-04-2016 SMGD1_RS01185 a06f36fc3b6cf6a03e47c65d892f7777 903 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 641 660 2.7E-41 T 22-04-2016 SMGD1_RS01185 a06f36fc3b6cf6a03e47c65d892f7777 903 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 665 677 2.7E-41 T 22-04-2016 SMGD1_RS01185 a06f36fc3b6cf6a03e47c65d892f7777 903 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 329 343 2.7E-41 T 22-04-2016 SMGD1_RS01185 a06f36fc3b6cf6a03e47c65d892f7777 903 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 167 181 2.7E-41 T 22-04-2016 SMGD1_RS01185 a06f36fc3b6cf6a03e47c65d892f7777 903 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 556 566 2.7E-41 T 22-04-2016 SMGD1_RS01185 a06f36fc3b6cf6a03e47c65d892f7777 903 PANTHER PTHR24093 5 903 3.2E-293 T 22-04-2016 SMGD1_RS09500 2fe627c52cca28ce3f08e51232903c0e 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 15.315 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS09500 2fe627c52cca28ce3f08e51232903c0e 44 PANTHER PTHR14503 2 44 9.1E-18 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS09500 2fe627c52cca28ce3f08e51232903c0e 44 Pfam PF00468 Ribosomal protein L34 2 44 1.4E-22 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS09500 2fe627c52cca28ce3f08e51232903c0e 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 22-04-2016 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS09500 2fe627c52cca28ce3f08e51232903c0e 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 2 44 5.7E-24 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS09500 2fe627c52cca28ce3f08e51232903c0e 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 25 7.0E-6 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS09460 ec4786e7752aabfc8ab46ae9f18e7f4c 213 Gene3D G3DSA:1.10.340.30 25 124 2.7E-31 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 SMGD1_RS09460 ec4786e7752aabfc8ab46ae9f18e7f4c 213 PANTHER PTHR10359:SF18 1 210 1.9E-61 T 22-04-2016 SMGD1_RS09460 ec4786e7752aabfc8ab46ae9f18e7f4c 213 SMART SM00478 41 187 1.4E-41 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 SMGD1_RS09460 ec4786e7752aabfc8ab46ae9f18e7f4c 213 Hamap MF_00942 Endonuclease III [nth]. 1 211 33.073 T 22-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 SMGD1_RS09460 ec4786e7752aabfc8ab46ae9f18e7f4c 213 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 189 205 9.7E-7 T 22-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 SMGD1_RS09460 ec4786e7752aabfc8ab46ae9f18e7f4c 213 TIGRFAM TIGR01083 nth: endonuclease III 7 196 2.0E-67 T 22-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 SMGD1_RS09460 ec4786e7752aabfc8ab46ae9f18e7f4c 213 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 189 205 - T 22-04-2016 IPR004035 Endonuclease III, iron-sulphur binding site SMGD1_RS09460 ec4786e7752aabfc8ab46ae9f18e7f4c 213 SUPERFAMILY SSF48150 7 208 2.83E-61 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 SMGD1_RS09460 ec4786e7752aabfc8ab46ae9f18e7f4c 213 Gene3D G3DSA:1.10.1670.10 125 208 3.0E-28 T 22-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal SMGD1_RS09460 ec4786e7752aabfc8ab46ae9f18e7f4c 213 PIRSF PIRSF001435 1 212 4.6E-45 T 22-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 SMGD1_RS09460 ec4786e7752aabfc8ab46ae9f18e7f4c 213 PANTHER PTHR10359 1 210 1.9E-61 T 22-04-2016 SMGD1_RS09460 ec4786e7752aabfc8ab46ae9f18e7f4c 213 SMART SM00525 188 208 8.8E-4 T 22-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 SMGD1_RS09460 ec4786e7752aabfc8ab46ae9f18e7f4c 213 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 37 169 2.2E-22 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 SMGD1_RS11150 71776b1575a356f46af43adab27fd6a2 425 Gene3D G3DSA:3.30.565.10 286 414 2.1E-10 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS11150 71776b1575a356f46af43adab27fd6a2 425 SUPERFAMILY SSF55874 294 417 1.1E-13 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS11150 71776b1575a356f46af43adab27fd6a2 425 SMART SM00388 224 282 5.7E-4 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS11150 71776b1575a356f46af43adab27fd6a2 425 PANTHER PTHR24423:SF477 165 405 2.7E-18 T 22-04-2016 SMGD1_RS11150 71776b1575a356f46af43adab27fd6a2 425 PANTHER PTHR24423:SF477 48 109 2.7E-18 T 22-04-2016 SMGD1_RS11150 71776b1575a356f46af43adab27fd6a2 425 SUPERFAMILY SSF47384 210 281 7.06E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS11150 71776b1575a356f46af43adab27fd6a2 425 PANTHER PTHR24423 165 405 2.7E-18 T 22-04-2016 SMGD1_RS11150 71776b1575a356f46af43adab27fd6a2 425 PANTHER PTHR24423 48 109 2.7E-18 T 22-04-2016 SMGD1_RS11150 71776b1575a356f46af43adab27fd6a2 425 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 330 410 2.9E-6 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS11150 71776b1575a356f46af43adab27fd6a2 425 Gene3D G3DSA:1.10.287.130 216 275 1.6E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS07810 7497a52db7f6ebffaf64d36824777409 689 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 5 59 8.5E-14 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 SMGD1_RS07810 7497a52db7f6ebffaf64d36824777409 689 SUPERFAMILY SSF50692 579 687 3.04E-16 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain SMGD1_RS07810 7497a52db7f6ebffaf64d36824777409 689 PANTHER PTHR11615 95 686 7.6E-95 T 22-04-2016 SMGD1_RS07810 7497a52db7f6ebffaf64d36824777409 689 PANTHER PTHR11615 2 78 7.6E-95 T 22-04-2016 SMGD1_RS07810 7497a52db7f6ebffaf64d36824777409 689 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 9 27 - T 22-04-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 SMGD1_RS07810 7497a52db7f6ebffaf64d36824777409 689 Gene3D G3DSA:2.20.25.90 2 65 8.3E-17 T 22-04-2016 SMGD1_RS07810 7497a52db7f6ebffaf64d36824777409 689 Pfam PF00384 Molybdopterin oxidoreductase 97 475 2.1E-46 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 SMGD1_RS07810 7497a52db7f6ebffaf64d36824777409 689 SMART SM00926 4 60 1.5E-14 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 SMGD1_RS07810 7497a52db7f6ebffaf64d36824777409 689 Pfam PF01568 Molydopterin dinucleotide binding domain 579 682 9.8E-13 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 SMGD1_RS07810 7497a52db7f6ebffaf64d36824777409 689 Gene3D G3DSA:2.40.40.20 579 686 2.5E-16 T 22-04-2016 SMGD1_RS07810 7497a52db7f6ebffaf64d36824777409 689 Gene3D G3DSA:3.40.228.10 159 346 4.3E-43 T 22-04-2016 SMGD1_RS07810 7497a52db7f6ebffaf64d36824777409 689 PANTHER PTHR11615:SF112 95 686 7.6E-95 T 22-04-2016 SMGD1_RS07810 7497a52db7f6ebffaf64d36824777409 689 PANTHER PTHR11615:SF112 2 78 7.6E-95 T 22-04-2016 SMGD1_RS07810 7497a52db7f6ebffaf64d36824777409 689 SUPERFAMILY SSF53706 3 518 4.06E-130 T 22-04-2016 SMGD1_RS07810 7497a52db7f6ebffaf64d36824777409 689 Gene3D G3DSA:3.40.50.740 67 158 1.0E-60 T 22-04-2016 SMGD1_RS07810 7497a52db7f6ebffaf64d36824777409 689 Gene3D G3DSA:3.40.50.740 347 547 1.0E-60 T 22-04-2016 SMGD1_RS02610 88438aecd5d208271731e1d149d89b4b 345 Gene3D G3DSA:3.90.25.10 196 325 2.1E-30 T 22-04-2016 SMGD1_RS02610 88438aecd5d208271731e1d149d89b4b 345 Pfam PF16363 GDP-mannose 4,6 dehydratase 18 331 3.1E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS02610 88438aecd5d208271731e1d149d89b4b 345 PANTHER PTHR10366:SF472 16 340 7.4E-111 T 22-04-2016 SMGD1_RS02610 88438aecd5d208271731e1d149d89b4b 345 PANTHER PTHR10366 16 340 7.4E-111 T 22-04-2016 SMGD1_RS02610 88438aecd5d208271731e1d149d89b4b 345 Gene3D G3DSA:3.40.50.720 13 195 1.9E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS02610 88438aecd5d208271731e1d149d89b4b 345 SUPERFAMILY SSF51735 13 341 4.39E-77 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS02610 88438aecd5d208271731e1d149d89b4b 345 PRINTS PR01713 Nucleotide sugar epimerase signature 232 247 2.7E-6 T 22-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 SMGD1_RS02610 88438aecd5d208271731e1d149d89b4b 345 PRINTS PR01713 Nucleotide sugar epimerase signature 302 319 2.7E-6 T 22-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 SMGD1_RS02610 88438aecd5d208271731e1d149d89b4b 345 PRINTS PR01713 Nucleotide sugar epimerase signature 43 59 2.7E-6 T 22-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 SMGD1_RS02600 f974841f9221b980c55ec4953e822e57 455 PANTHER PTHR12526 147 275 7.6E-87 T 22-04-2016 SMGD1_RS02600 f974841f9221b980c55ec4953e822e57 455 PANTHER PTHR12526 337 454 7.6E-87 T 22-04-2016 SMGD1_RS02600 f974841f9221b980c55ec4953e822e57 455 Pfam PF01050 Mannose-6-phosphate isomerase 303 450 4.0E-53 T 22-04-2016 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882|UniPathway: UPA00126 SMGD1_RS02600 f974841f9221b980c55ec4953e822e57 455 SUPERFAMILY SSF51182 172 454 8.22E-64 T 22-04-2016 IPR011051 RmlC-like cupin domain SMGD1_RS02600 f974841f9221b980c55ec4953e822e57 455 PANTHER PTHR12526:SF357 147 275 7.6E-87 T 22-04-2016 SMGD1_RS02600 f974841f9221b980c55ec4953e822e57 455 PANTHER PTHR12526:SF357 337 454 7.6E-87 T 22-04-2016 SMGD1_RS02600 f974841f9221b980c55ec4953e822e57 455 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 2 454 3.8E-156 T 22-04-2016 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882|UniPathway: UPA00126 SMGD1_RS02600 f974841f9221b980c55ec4953e822e57 455 Gene3D G3DSA:3.90.550.10 1 257 2.5E-85 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMGD1_RS02600 f974841f9221b980c55ec4953e822e57 455 Pfam PF00483 Nucleotidyl transferase 3 272 3.4E-58 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 SMGD1_RS02600 f974841f9221b980c55ec4953e822e57 455 Gene3D G3DSA:2.60.120.10 342 454 3.1E-35 T 22-04-2016 IPR014710 RmlC-like jelly roll fold SMGD1_RS02600 f974841f9221b980c55ec4953e822e57 455 SUPERFAMILY SSF53448 1 266 1.71E-62 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMGD1_RS02875 b6a4518e893ab7705c66307ddc532ae9 534 SUPERFAMILY SSF52540 299 525 4.93E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS02875 b6a4518e893ab7705c66307ddc532ae9 534 Pfam PF00005 ABC transporter 18 186 1.7E-19 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMGD1_RS02875 b6a4518e893ab7705c66307ddc532ae9 534 Pfam PF00005 ABC transporter 337 468 8.7E-24 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMGD1_RS02875 b6a4518e893ab7705c66307ddc532ae9 534 PANTHER PTHR19211 1 525 1.2E-229 T 22-04-2016 SMGD1_RS02875 b6a4518e893ab7705c66307ddc532ae9 534 SUPERFAMILY SSF52540 4 240 8.89E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS02875 b6a4518e893ab7705c66307ddc532ae9 534 Gene3D G3DSA:3.40.50.300 3 101 4.2E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS02875 b6a4518e893ab7705c66307ddc532ae9 534 Gene3D G3DSA:3.40.50.300 134 283 4.2E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS02875 b6a4518e893ab7705c66307ddc532ae9 534 Gene3D G3DSA:3.40.50.300 324 530 5.8E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS02875 b6a4518e893ab7705c66307ddc532ae9 534 Pfam PF12848 ABC transporter 226 310 4.1E-18 T 22-04-2016 IPR032781 ABC-transporter extension domain SMGD1_RS02875 b6a4518e893ab7705c66307ddc532ae9 534 SMART SM00382 346 513 1.7E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain SMGD1_RS02875 b6a4518e893ab7705c66307ddc532ae9 534 SMART SM00382 26 231 1.9E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain SMGD1_RS02875 b6a4518e893ab7705c66307ddc532ae9 534 PANTHER PTHR19211:SF38 1 525 1.2E-229 T 22-04-2016 SMGD1_RS04195 5b03803458c374bee8adbeb7e0ed1a09 306 Gene3D G3DSA:3.40.50.1370 139 290 3.3E-59 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SMGD1_RS04195 5b03803458c374bee8adbeb7e0ed1a09 306 PRINTS PR00102 Ornithine carbamoyltransferase signature 220 230 4.3E-30 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 SMGD1_RS04195 5b03803458c374bee8adbeb7e0ed1a09 306 PRINTS PR00102 Ornithine carbamoyltransferase signature 118 132 4.3E-30 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 SMGD1_RS04195 5b03803458c374bee8adbeb7e0ed1a09 306 PRINTS PR00102 Ornithine carbamoyltransferase signature 282 293 4.3E-30 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 SMGD1_RS04195 5b03803458c374bee8adbeb7e0ed1a09 306 PRINTS PR00102 Ornithine carbamoyltransferase signature 78 91 4.3E-30 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 SMGD1_RS04195 5b03803458c374bee8adbeb7e0ed1a09 306 PRINTS PR00102 Ornithine carbamoyltransferase signature 45 59 4.3E-30 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 SMGD1_RS04195 5b03803458c374bee8adbeb7e0ed1a09 306 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 129 140 6.3E-24 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SMGD1_RS04195 5b03803458c374bee8adbeb7e0ed1a09 306 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 47 66 6.3E-24 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SMGD1_RS04195 5b03803458c374bee8adbeb7e0ed1a09 306 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 268 291 6.3E-24 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SMGD1_RS04195 5b03803458c374bee8adbeb7e0ed1a09 306 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 256 265 6.3E-24 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SMGD1_RS04195 5b03803458c374bee8adbeb7e0ed1a09 306 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 2 142 4.7E-51 T 22-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 SMGD1_RS04195 5b03803458c374bee8adbeb7e0ed1a09 306 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 47 54 - T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SMGD1_RS04195 5b03803458c374bee8adbeb7e0ed1a09 306 PANTHER PTHR11405:SF1 2 302 2.3E-144 T 22-04-2016 SMGD1_RS04195 5b03803458c374bee8adbeb7e0ed1a09 306 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 2 301 1.2E-120 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 SMGD1_RS04195 5b03803458c374bee8adbeb7e0ed1a09 306 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 1 304 77.814 T 22-04-2016 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 SMGD1_RS04195 5b03803458c374bee8adbeb7e0ed1a09 306 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 148 301 2.1E-53 T 22-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 SMGD1_RS04195 5b03803458c374bee8adbeb7e0ed1a09 306 SUPERFAMILY SSF53671 2 303 1.22E-100 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SMGD1_RS04195 5b03803458c374bee8adbeb7e0ed1a09 306 PANTHER PTHR11405 2 302 2.3E-144 T 22-04-2016 SMGD1_RS04195 5b03803458c374bee8adbeb7e0ed1a09 306 Gene3D G3DSA:3.40.50.1370 2 138 2.4E-57 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SMGD1_RS06875 1fa48c5285a1cf81501821608fc3522f 410 SUPERFAMILY SSF53901 214 406 2.8E-60 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SMGD1_RS06875 1fa48c5285a1cf81501821608fc3522f 410 Gene3D G3DSA:3.40.47.10 263 407 3.3E-47 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SMGD1_RS06875 1fa48c5285a1cf81501821608fc3522f 410 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 154 170 - T 22-04-2016 IPR018201 Beta-ketoacyl synthase, active site SMGD1_RS06875 1fa48c5285a1cf81501821608fc3522f 410 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 246 1.8E-43 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal SMGD1_RS06875 1fa48c5285a1cf81501821608fc3522f 410 SMART SM00825 Beta-ketoacyl synthase 4 408 2.6E-12 T 22-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain SMGD1_RS06875 1fa48c5285a1cf81501821608fc3522f 410 Gene3D G3DSA:3.40.47.10 1 259 7.3E-57 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SMGD1_RS06875 1fa48c5285a1cf81501821608fc3522f 410 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 254 363 1.2E-29 T 22-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal SMGD1_RS06875 1fa48c5285a1cf81501821608fc3522f 410 PANTHER PTHR11712 1 407 6.0E-127 T 22-04-2016 SMGD1_RS06875 1fa48c5285a1cf81501821608fc3522f 410 SUPERFAMILY SSF53901 2 253 1.38E-57 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SMGD1_RS04450 94e201fdd3911fde6cfa1f5941522051 1506 Pfam PF05000 RNA polymerase Rpb1, domain 4 670 742 1.1E-15 T 22-04-2016 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SMGD1_RS04450 94e201fdd3911fde6cfa1f5941522051 1506 SUPERFAMILY SSF64484 1263 1494 0.0 T 22-04-2016 SMGD1_RS04450 94e201fdd3911fde6cfa1f5941522051 1506 SUPERFAMILY SSF64484 16 930 0.0 T 22-04-2016 SMGD1_RS04450 94e201fdd3911fde6cfa1f5941522051 1506 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 21 1496 0.0 T 22-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SMGD1_RS04450 94e201fdd3911fde6cfa1f5941522051 1506 Pfam PF00623 RNA polymerase Rpb1, domain 2 354 402 2.5E-9 T 22-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SMGD1_RS04450 94e201fdd3911fde6cfa1f5941522051 1506 Pfam PF00623 RNA polymerase Rpb1, domain 2 398 495 2.7E-27 T 22-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SMGD1_RS04450 94e201fdd3911fde6cfa1f5941522051 1506 PANTHER PTHR19376:SF32 1145 1287 0.0 T 22-04-2016 SMGD1_RS04450 94e201fdd3911fde6cfa1f5941522051 1506 PANTHER PTHR19376:SF32 949 972 0.0 T 22-04-2016 SMGD1_RS04450 94e201fdd3911fde6cfa1f5941522051 1506 PANTHER PTHR19376:SF32 1432 1494 0.0 T 22-04-2016 SMGD1_RS04450 94e201fdd3911fde6cfa1f5941522051 1506 PANTHER PTHR19376:SF32 1305 1391 0.0 T 22-04-2016 SMGD1_RS04450 94e201fdd3911fde6cfa1f5941522051 1506 PANTHER PTHR19376:SF32 5 929 0.0 T 22-04-2016 SMGD1_RS04450 94e201fdd3911fde6cfa1f5941522051 1506 SMART SM00663 245 524 3.2E-170 T 22-04-2016 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SMGD1_RS04450 94e201fdd3911fde6cfa1f5941522051 1506 Pfam PF04998 RNA polymerase Rpb1, domain 5 752 1441 1.0E-64 T 22-04-2016 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SMGD1_RS04450 94e201fdd3911fde6cfa1f5941522051 1506 Gene3D G3DSA:2.40.50.100 1286 1341 1.0E-4 T 22-04-2016 SMGD1_RS04450 94e201fdd3911fde6cfa1f5941522051 1506 Gene3D G3DSA:2.40.40.20 359 386 1.0E-36 T 22-04-2016 SMGD1_RS04450 94e201fdd3911fde6cfa1f5941522051 1506 Gene3D G3DSA:2.40.40.20 427 498 1.0E-36 T 22-04-2016 SMGD1_RS04450 94e201fdd3911fde6cfa1f5941522051 1506 Pfam PF04997 RNA polymerase Rpb1, domain 1 16 352 6.6E-84 T 22-04-2016 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SMGD1_RS04450 94e201fdd3911fde6cfa1f5941522051 1506 PANTHER PTHR19376 1145 1287 0.0 T 22-04-2016 SMGD1_RS04450 94e201fdd3911fde6cfa1f5941522051 1506 PANTHER PTHR19376 949 972 0.0 T 22-04-2016 SMGD1_RS04450 94e201fdd3911fde6cfa1f5941522051 1506 PANTHER PTHR19376 1432 1494 0.0 T 22-04-2016 SMGD1_RS04450 94e201fdd3911fde6cfa1f5941522051 1506 PANTHER PTHR19376 1305 1391 0.0 T 22-04-2016 SMGD1_RS04450 94e201fdd3911fde6cfa1f5941522051 1506 PANTHER PTHR19376 5 929 0.0 T 22-04-2016 SMGD1_RS04450 94e201fdd3911fde6cfa1f5941522051 1506 Pfam PF04983 RNA polymerase Rpb1, domain 3 499 641 2.2E-22 T 22-04-2016 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SMGD1_RS04450 94e201fdd3911fde6cfa1f5941522051 1506 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 16 1505 10.293 T 22-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SMGD1_RS08410 317fb4da0033046e9145c28903c495b3 413 SUPERFAMILY SSF56762 33 413 3.4E-119 T 22-04-2016 IPR029014 NiFe hydrogenase-like SMGD1_RS08410 317fb4da0033046e9145c28903c495b3 413 PANTHER PTHR11993:SF10 18 408 1.2E-170 T 22-04-2016 SMGD1_RS08410 317fb4da0033046e9145c28903c495b3 413 PANTHER PTHR11993 18 408 1.2E-170 T 22-04-2016 SMGD1_RS08410 317fb4da0033046e9145c28903c495b3 413 Gene3D G3DSA:1.10.645.10 17 399 5.2E-58 T 22-04-2016 IPR029014 NiFe hydrogenase-like SMGD1_RS08410 317fb4da0033046e9145c28903c495b3 413 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 23 413 4.9E-170 T 22-04-2016 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 SMGD1_RS08410 317fb4da0033046e9145c28903c495b3 413 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 19 413 44.737 T 22-04-2016 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 SMGD1_RS08410 317fb4da0033046e9145c28903c495b3 413 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 137 413 9.1E-105 T 22-04-2016 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 SMGD1_RS01195 9bf87328f194aab802a18848a1c01a7b 289 SUPERFAMILY SSF52402 7 143 3.68E-20 T 22-04-2016 SMGD1_RS01195 9bf87328f194aab802a18848a1c01a7b 289 Gene3D G3DSA:3.40.50.620 7 143 4.1E-22 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMGD1_RS01195 9bf87328f194aab802a18848a1c01a7b 289 Gene3D G3DSA:3.40.50.620 149 283 6.0E-14 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMGD1_RS01195 9bf87328f194aab802a18848a1c01a7b 289 Pfam PF00582 Universal stress protein family 149 282 8.7E-12 T 22-04-2016 IPR006016 UspA GO:0006950 SMGD1_RS01195 9bf87328f194aab802a18848a1c01a7b 289 Pfam PF00582 Universal stress protein family 5 142 4.2E-17 T 22-04-2016 IPR006016 UspA GO:0006950 SMGD1_RS01195 9bf87328f194aab802a18848a1c01a7b 289 PRINTS PR01438 Universal stress protein signature 149 167 2.0E-8 T 22-04-2016 IPR006015 Universal stress protein A SMGD1_RS01195 9bf87328f194aab802a18848a1c01a7b 289 PRINTS PR01438 Universal stress protein signature 262 284 2.0E-8 T 22-04-2016 IPR006015 Universal stress protein A SMGD1_RS01195 9bf87328f194aab802a18848a1c01a7b 289 PRINTS PR01438 Universal stress protein signature 245 257 2.0E-8 T 22-04-2016 IPR006015 Universal stress protein A SMGD1_RS01195 9bf87328f194aab802a18848a1c01a7b 289 SUPERFAMILY SSF52402 149 282 4.27E-12 T 22-04-2016 SMGD1_RS01195 9bf87328f194aab802a18848a1c01a7b 289 PANTHER PTHR31964 7 160 1.8E-14 T 22-04-2016 SMGD1_RS01195 9bf87328f194aab802a18848a1c01a7b 289 PANTHER PTHR31964:SF42 7 160 1.8E-14 T 22-04-2016 SMGD1_RS04765 5cb1edcb26814231eab0c5d488a692b3 282 Pfam PF13509 S1 domain 9 68 8.4E-18 T 22-04-2016 SMGD1_RS04765 5cb1edcb26814231eab0c5d488a692b3 282 PIRSF PIRSF012524 5 282 3.2E-58 T 22-04-2016 IPR014464 Conserved virulence factor B SMGD1_RS04765 5cb1edcb26814231eab0c5d488a692b3 282 PANTHER PTHR37296 6 282 7.3E-66 T 22-04-2016 SMGD1_RS04765 5cb1edcb26814231eab0c5d488a692b3 282 SUPERFAMILY SSF50249 151 217 7.56E-5 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMGD1_RS09370 0d4d83cf5a6495ab463d107a034f58df 403 SUPERFAMILY SSF53633 3 242 6.55E-73 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SMGD1_RS09370 0d4d83cf5a6495ab463d107a034f58df 403 ProSitePatterns PS00324 Aspartokinase signature. 4 12 - T 22-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 SMGD1_RS09370 0d4d83cf5a6495ab463d107a034f58df 403 Pfam PF13840 ACT domain 335 397 7.2E-13 T 22-04-2016 IPR027795 GATS-like ACT domain SMGD1_RS09370 0d4d83cf5a6495ab463d107a034f58df 403 PANTHER PTHR21499 1 403 1.0E-153 T 22-04-2016 SMGD1_RS09370 0d4d83cf5a6495ab463d107a034f58df 403 PIRSF PIRSF000726 55 403 1.7E-132 T 22-04-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 SMGD1_RS09370 0d4d83cf5a6495ab463d107a034f58df 403 Gene3D G3DSA:3.30.70.260 268 320 7.4E-6 T 22-04-2016 SMGD1_RS09370 0d4d83cf5a6495ab463d107a034f58df 403 PANTHER PTHR21499:SF27 1 403 1.0E-153 T 22-04-2016 SMGD1_RS09370 0d4d83cf5a6495ab463d107a034f58df 403 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 62 400 1.9E-118 T 22-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 SMGD1_RS09370 0d4d83cf5a6495ab463d107a034f58df 403 Gene3D G3DSA:3.40.1160.10 1 246 2.5E-71 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SMGD1_RS09370 0d4d83cf5a6495ab463d107a034f58df 403 SUPERFAMILY SSF55021 246 326 2.89E-18 T 22-04-2016 SMGD1_RS09370 0d4d83cf5a6495ab463d107a034f58df 403 SUPERFAMILY SSF55021 330 402 1.91E-20 T 22-04-2016 SMGD1_RS09370 0d4d83cf5a6495ab463d107a034f58df 403 Pfam PF01842 ACT domain 266 318 3.2E-9 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 SMGD1_RS09370 0d4d83cf5a6495ab463d107a034f58df 403 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 1 401 4.9E-140 T 22-04-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 SMGD1_RS09370 0d4d83cf5a6495ab463d107a034f58df 403 Pfam PF00696 Amino acid kinase family 1 224 4.6E-52 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SMGD1_RS06020 de58c547921d1803723c0578d884c713 197 PANTHER PTHR10695 1 192 8.7E-56 T 22-04-2016 SMGD1_RS06020 de58c547921d1803723c0578d884c713 197 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 7 186 1.7E-45 T 22-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 SMGD1_RS06020 de58c547921d1803723c0578d884c713 197 Gene3D G3DSA:3.40.50.300 3 194 6.4E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS06020 de58c547921d1803723c0578d884c713 197 Pfam PF01121 Dephospho-CoA kinase 6 178 2.2E-43 T 22-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 SMGD1_RS06020 de58c547921d1803723c0578d884c713 197 SUPERFAMILY SSF52540 5 191 6.98E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS06020 de58c547921d1803723c0578d884c713 197 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 4 195 25.611 T 22-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 SMGD1_RS00500 4fb7d626bc146779875e62d126f88f2f 659 PIRSF PIRSF006402 13 658 5.2E-164 T 22-04-2016 IPR024705 Spermatogenesis-associated protein 20 SMGD1_RS00500 4fb7d626bc146779875e62d126f88f2f 659 SUPERFAMILY SSF48208 206 514 1.36E-37 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 SMGD1_RS00500 4fb7d626bc146779875e62d126f88f2f 659 Gene3D G3DSA:1.50.10.10 236 343 1.0E-8 T 22-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 SMGD1_RS00500 4fb7d626bc146779875e62d126f88f2f 659 Gene3D G3DSA:1.50.10.10 414 456 1.0E-8 T 22-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 SMGD1_RS00500 4fb7d626bc146779875e62d126f88f2f 659 PANTHER PTHR12145:SF11 20 615 4.2E-154 T 22-04-2016 SMGD1_RS00500 4fb7d626bc146779875e62d126f88f2f 659 SUPERFAMILY SSF52833 17 150 2.44E-31 T 22-04-2016 IPR012336 Thioredoxin-like fold SMGD1_RS00500 4fb7d626bc146779875e62d126f88f2f 659 Gene3D G3DSA:3.40.30.10 38 148 2.3E-27 T 22-04-2016 IPR012336 Thioredoxin-like fold SMGD1_RS00500 4fb7d626bc146779875e62d126f88f2f 659 PANTHER PTHR12145 20 615 4.2E-154 T 22-04-2016 SMGD1_RS00500 4fb7d626bc146779875e62d126f88f2f 659 Pfam PF03190 Protein of unknown function, DUF255 20 180 1.7E-62 T 22-04-2016 IPR004879 Domain of unknown function DUF255 SMGD1_RS06495 669afee5baf42cd44593385c6d7d5f0c 539 PIRSF PIRSF000171 1 534 2.2E-42 T 22-04-2016 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit SMGD1_RS06495 669afee5baf42cd44593385c6d7d5f0c 539 Gene3D G3DSA:3.50.50.60 330 394 5.4E-108 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS06495 669afee5baf42cd44593385c6d7d5f0c 539 Gene3D G3DSA:3.50.50.60 3 234 5.4E-108 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS06495 669afee5baf42cd44593385c6d7d5f0c 539 Gene3D G3DSA:4.10.80.40 508 529 6.0E-6 T 22-04-2016 SMGD1_RS06495 669afee5baf42cd44593385c6d7d5f0c 539 Gene3D G3DSA:1.20.58.100 405 507 7.9E-26 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 SMGD1_RS06495 669afee5baf42cd44593385c6d7d5f0c 539 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 6.1E-11 T 22-04-2016 SMGD1_RS06495 669afee5baf42cd44593385c6d7d5f0c 539 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 336 358 6.1E-11 T 22-04-2016 SMGD1_RS06495 669afee5baf42cd44593385c6d7d5f0c 539 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 351 358 9.3E-8 T 22-04-2016 SMGD1_RS06495 669afee5baf42cd44593385c6d7d5f0c 539 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 9.3E-8 T 22-04-2016 SMGD1_RS06495 669afee5baf42cd44593385c6d7d5f0c 539 SUPERFAMILY SSF56425 229 334 3.59E-35 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain SMGD1_RS06495 669afee5baf42cd44593385c6d7d5f0c 539 PANTHER PTHR11632 1 529 1.1E-195 T 22-04-2016 SMGD1_RS06495 669afee5baf42cd44593385c6d7d5f0c 539 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 4 530 1.5E-173 T 22-04-2016 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 SMGD1_RS06495 669afee5baf42cd44593385c6d7d5f0c 539 Pfam PF00890 FAD binding domain 4 373 8.9E-107 T 22-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain SMGD1_RS06495 669afee5baf42cd44593385c6d7d5f0c 539 SUPERFAMILY SSF51905 3 252 5.26E-74 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS06495 669afee5baf42cd44593385c6d7d5f0c 539 SUPERFAMILY SSF51905 337 399 5.26E-74 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS06495 669afee5baf42cd44593385c6d7d5f0c 539 Pfam PF02910 Fumarate reductase flavoprotein C-term 430 529 3.0E-25 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 SMGD1_RS06495 669afee5baf42cd44593385c6d7d5f0c 539 Gene3D G3DSA:3.90.700.10 235 329 4.4E-31 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain SMGD1_RS06495 669afee5baf42cd44593385c6d7d5f0c 539 SUPERFAMILY SSF46977 420 531 1.44E-29 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 SMGD1_RS09510 f57295168a28ee757e0eb2048664ddb0 541 PRINTS PR01900 YidC translocation/secretion protein signature 446 461 8.0E-27 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 SMGD1_RS09510 f57295168a28ee757e0eb2048664ddb0 541 PRINTS PR01900 YidC translocation/secretion protein signature 466 490 8.0E-27 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 SMGD1_RS09510 f57295168a28ee757e0eb2048664ddb0 541 PRINTS PR01900 YidC translocation/secretion protein signature 317 333 8.0E-27 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 SMGD1_RS09510 f57295168a28ee757e0eb2048664ddb0 541 PANTHER PTHR12428 298 510 6.7E-83 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 SMGD1_RS09510 f57295168a28ee757e0eb2048664ddb0 541 PANTHER PTHR12428:SF14 298 510 6.7E-83 T 22-04-2016 SMGD1_RS09510 f57295168a28ee757e0eb2048664ddb0 541 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 2 513 19.381 T 22-04-2016 IPR019998 Membrane insertase YidC GO:0016021|GO:0051205 SMGD1_RS09510 f57295168a28ee757e0eb2048664ddb0 541 Pfam PF14849 YidC periplasmic domain 75 321 4.3E-8 T 22-04-2016 IPR028053 Membrane insertase YidC, N-terminal SMGD1_RS09510 f57295168a28ee757e0eb2048664ddb0 541 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 2 330 1.9E-42 T 22-04-2016 IPR028053 Membrane insertase YidC, N-terminal SMGD1_RS09510 f57295168a28ee757e0eb2048664ddb0 541 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 331 510 3.0E-69 T 22-04-2016 IPR028055 Membrane insertase YidC/Oxa1, C-terminal SMGD1_RS09510 f57295168a28ee757e0eb2048664ddb0 541 Pfam PF02096 60Kd inner membrane protein 332 510 1.3E-61 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 SMGD1_RS13930 fe31ec270890455613693d57e38fd652 401 Gene3D G3DSA:3.30.70.270 236 392 3.9E-17 T 22-04-2016 SMGD1_RS13930 fe31ec270890455613693d57e38fd652 401 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 233 391 2.9E-17 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS13930 fe31ec270890455613693d57e38fd652 401 Pfam PF00990 Diguanylate cyclase, GGDEF domain 234 388 2.9E-17 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS13930 fe31ec270890455613693d57e38fd652 401 SUPERFAMILY SSF55073 259 391 7.45E-15 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS13930 fe31ec270890455613693d57e38fd652 401 SMART SM00267 214 393 7.9E-6 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS06885 92ef04bd6b2a61be881583150c74bca2 440 PRINTS PR00419 Adrenodoxin reductase family signature 25 38 9.0E-7 T 22-04-2016 SMGD1_RS06885 92ef04bd6b2a61be881583150c74bca2 440 PRINTS PR00419 Adrenodoxin reductase family signature 2 24 9.0E-7 T 22-04-2016 SMGD1_RS06885 92ef04bd6b2a61be881583150c74bca2 440 SUPERFAMILY SSF51905 1 285 6.69E-36 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS06885 92ef04bd6b2a61be881583150c74bca2 440 SUPERFAMILY SSF51905 406 432 6.69E-36 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS06885 92ef04bd6b2a61be881583150c74bca2 440 Gene3D G3DSA:3.50.50.60 194 294 1.5E-26 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS06885 92ef04bd6b2a61be881583150c74bca2 440 Gene3D G3DSA:3.50.50.60 2 119 1.5E-26 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS06885 92ef04bd6b2a61be881583150c74bca2 440 PANTHER PTHR10668 3 437 1.7E-22 T 22-04-2016 SMGD1_RS06885 92ef04bd6b2a61be881583150c74bca2 440 PANTHER PTHR10668:SF4 3 437 1.7E-22 T 22-04-2016 SMGD1_RS06885 92ef04bd6b2a61be881583150c74bca2 440 Pfam PF01593 Flavin containing amine oxidoreductase 10 419 2.0E-18 T 22-04-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 SMGD1_RS08435 9ba2f11870826f1ea451e23a261174b4 138 Gene3D G3DSA:2.40.40.20 68 121 8.7E-5 T 22-04-2016 SMGD1_RS08435 9ba2f11870826f1ea451e23a261174b4 138 SUPERFAMILY SSF50692 60 126 1.49E-6 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain SMGD1_RS08435 9ba2f11870826f1ea451e23a261174b4 138 Pfam PF01568 Molydopterin dinucleotide binding domain 62 115 7.5E-6 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 SMGD1_RS05205 d6d8815c04d10347d49bf8733b8927e9 396 PANTHER PTHR10366:SF256 34 233 1.5E-21 T 22-04-2016 SMGD1_RS05205 d6d8815c04d10347d49bf8733b8927e9 396 SUPERFAMILY SSF51735 35 309 2.61E-26 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS05205 d6d8815c04d10347d49bf8733b8927e9 396 Pfam PF02719 Polysaccharide biosynthesis protein 36 323 2.4E-45 T 22-04-2016 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain SMGD1_RS05205 d6d8815c04d10347d49bf8733b8927e9 396 Gene3D G3DSA:3.40.50.720 32 243 5.7E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS05205 d6d8815c04d10347d49bf8733b8927e9 396 PANTHER PTHR10366 34 233 1.5E-21 T 22-04-2016 SMGD1_RS04360 d95a308ee2bd7e4dec2d7b1ea9f1f22e 394 PANTHER PTHR21666 122 340 2.1E-43 T 22-04-2016 SMGD1_RS04360 d95a308ee2bd7e4dec2d7b1ea9f1f22e 394 Gene3D G3DSA:2.70.70.10 194 340 9.8E-49 T 22-04-2016 SMGD1_RS04360 d95a308ee2bd7e4dec2d7b1ea9f1f22e 394 Pfam PF01551 Peptidase family M23 239 335 3.8E-35 T 22-04-2016 IPR016047 Peptidase M23 SMGD1_RS04360 d95a308ee2bd7e4dec2d7b1ea9f1f22e 394 SUPERFAMILY SSF51261 89 337 3.71E-63 T 22-04-2016 IPR011055 Duplicated hybrid motif SMGD1_RS02035 553378cb45839b0aa49c41706dc28b27 702 SMART SM00091 178 244 5.0E-6 T 22-04-2016 IPR000014 PAS domain SMGD1_RS02035 553378cb45839b0aa49c41706dc28b27 702 SUPERFAMILY SSF55781 23 150 3.47E-10 T 22-04-2016 IPR029016 GAF domain-like SMGD1_RS02035 553378cb45839b0aa49c41706dc28b27 702 SMART SM00267 292 454 3.0E-11 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS02035 553378cb45839b0aa49c41706dc28b27 702 PANTHER PTHR33121:SF10 416 699 8.6E-45 T 22-04-2016 SMGD1_RS02035 553378cb45839b0aa49c41706dc28b27 702 PANTHER PTHR33121:SF10 284 297 8.6E-45 T 22-04-2016 SMGD1_RS02035 553378cb45839b0aa49c41706dc28b27 702 Pfam PF00990 Diguanylate cyclase, GGDEF domain 303 445 2.6E-15 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS02035 553378cb45839b0aa49c41706dc28b27 702 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 301 453 2.9E-11 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS02035 553378cb45839b0aa49c41706dc28b27 702 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 183 299 1.2E-16 T 22-04-2016 IPR000014 PAS domain SMGD1_RS02035 553378cb45839b0aa49c41706dc28b27 702 Gene3D G3DSA:3.20.20.450 469 699 1.3E-63 T 22-04-2016 IPR001633 EAL domain SMGD1_RS02035 553378cb45839b0aa49c41706dc28b27 702 SUPERFAMILY SSF141868 471 698 6.28E-64 T 22-04-2016 IPR001633 EAL domain SMGD1_RS02035 553378cb45839b0aa49c41706dc28b27 702 Pfam PF00563 EAL domain 472 697 1.2E-55 T 22-04-2016 IPR001633 EAL domain SMGD1_RS02035 553378cb45839b0aa49c41706dc28b27 702 SUPERFAMILY SSF55073 308 454 7.53E-19 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS02035 553378cb45839b0aa49c41706dc28b27 702 Gene3D G3DSA:3.30.450.20 187 290 4.1E-25 T 22-04-2016 SMGD1_RS02035 553378cb45839b0aa49c41706dc28b27 702 SUPERFAMILY SSF55785 187 288 7.68E-26 T 22-04-2016 IPR000014 PAS domain SMGD1_RS02035 553378cb45839b0aa49c41706dc28b27 702 Gene3D G3DSA:3.30.70.270 304 457 3.2E-19 T 22-04-2016 SMGD1_RS02035 553378cb45839b0aa49c41706dc28b27 702 SMART SM00052 465 702 1.5E-54 T 22-04-2016 IPR001633 EAL domain SMGD1_RS02035 553378cb45839b0aa49c41706dc28b27 702 Pfam PF13426 PAS domain 189 291 7.3E-16 T 22-04-2016 IPR000014 PAS domain SMGD1_RS02035 553378cb45839b0aa49c41706dc28b27 702 PANTHER PTHR33121 416 699 8.6E-45 T 22-04-2016 SMGD1_RS02035 553378cb45839b0aa49c41706dc28b27 702 PANTHER PTHR33121 284 297 8.6E-45 T 22-04-2016 SMGD1_RS00375 94c55587bbed4783bf2307c39e2fc56f 644 Gene3D G3DSA:3.40.30.10 20 129 2.8E-32 T 22-04-2016 IPR012336 Thioredoxin-like fold SMGD1_RS00375 94c55587bbed4783bf2307c39e2fc56f 644 SUPERFAMILY SSF48208 187 509 8.16E-52 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 SMGD1_RS00375 94c55587bbed4783bf2307c39e2fc56f 644 PANTHER PTHR12145:SF11 2 586 1.6E-177 T 22-04-2016 SMGD1_RS00375 94c55587bbed4783bf2307c39e2fc56f 644 Gene3D G3DSA:1.50.10.10 225 506 6.7E-11 T 22-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 SMGD1_RS00375 94c55587bbed4783bf2307c39e2fc56f 644 Pfam PF03190 Protein of unknown function, DUF255 3 167 8.5E-65 T 22-04-2016 IPR004879 Domain of unknown function DUF255 SMGD1_RS00375 94c55587bbed4783bf2307c39e2fc56f 644 PIRSF PIRSF006402 1 644 7.2E-201 T 22-04-2016 IPR024705 Spermatogenesis-associated protein 20 SMGD1_RS00375 94c55587bbed4783bf2307c39e2fc56f 644 PANTHER PTHR12145 2 586 1.6E-177 T 22-04-2016 SMGD1_RS00375 94c55587bbed4783bf2307c39e2fc56f 644 SUPERFAMILY SSF52833 1 128 3.6E-33 T 22-04-2016 IPR012336 Thioredoxin-like fold SMGD1_RS02525 39ea3cd439fea715c89497fca8e2d57f 435 PANTHER PTHR30244:SF16 8 337 1.2E-73 T 22-04-2016 SMGD1_RS02525 39ea3cd439fea715c89497fca8e2d57f 435 PANTHER PTHR30244 8 337 1.2E-73 T 22-04-2016 SMGD1_RS02525 39ea3cd439fea715c89497fca8e2d57f 435 SUPERFAMILY SSF53383 16 428 1.22E-88 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SMGD1_RS02525 39ea3cd439fea715c89497fca8e2d57f 435 Gene3D G3DSA:3.90.1150.10 272 429 2.5E-9 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SMGD1_RS02525 39ea3cd439fea715c89497fca8e2d57f 435 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 23 424 4.2E-87 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase SMGD1_RS02525 39ea3cd439fea715c89497fca8e2d57f 435 Gene3D G3DSA:3.40.640.10 22 271 4.0E-73 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SMGD1_RS07360 84cf69b79d1aff2a834c388fb43a5206 137 PRINTS PR00103 cAMP-dependent protein kinase signature 77 86 4.9E-7 T 22-04-2016 SMGD1_RS07360 84cf69b79d1aff2a834c388fb43a5206 137 PRINTS PR00103 cAMP-dependent protein kinase signature 52 66 4.9E-7 T 22-04-2016 SMGD1_RS07360 84cf69b79d1aff2a834c388fb43a5206 137 PRINTS PR00103 cAMP-dependent protein kinase signature 89 100 4.9E-7 T 22-04-2016 SMGD1_RS07360 84cf69b79d1aff2a834c388fb43a5206 137 PRINTS PR00103 cAMP-dependent protein kinase signature 37 51 4.9E-7 T 22-04-2016 SMGD1_RS07360 84cf69b79d1aff2a834c388fb43a5206 137 Pfam PF00027 Cyclic nucleotide-binding domain 35 116 1.9E-16 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain SMGD1_RS07360 84cf69b79d1aff2a834c388fb43a5206 137 PANTHER PTHR24567:SF30 1 136 1.5E-20 T 22-04-2016 SMGD1_RS07360 84cf69b79d1aff2a834c388fb43a5206 137 PANTHER PTHR24567 1 136 1.5E-20 T 22-04-2016 SMGD1_RS07360 84cf69b79d1aff2a834c388fb43a5206 137 SMART SM00100 16 132 2.4E-19 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain SMGD1_RS07360 84cf69b79d1aff2a834c388fb43a5206 137 SUPERFAMILY SSF51206 10 133 1.57E-31 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like SMGD1_RS07360 84cf69b79d1aff2a834c388fb43a5206 137 Gene3D G3DSA:2.60.120.10 10 136 7.1E-31 T 22-04-2016 IPR014710 RmlC-like jelly roll fold SMGD1_RS07120 7be12aaf14b0b4c4b86071fad8d0d795 375 SUPERFAMILY SSF47203 217 372 4.19E-22 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 SMGD1_RS07120 7be12aaf14b0b4c4b86071fad8d0d795 375 PIRSF PIRSF016578 4 353 1.3E-20 T 22-04-2016 SMGD1_RS07120 7be12aaf14b0b4c4b86071fad8d0d795 375 Gene3D G3DSA:2.40.110.10 113 209 1.8E-16 T 22-04-2016 SMGD1_RS07120 7be12aaf14b0b4c4b86071fad8d0d795 375 PANTHER PTHR10909:SF10 4 353 2.7E-53 T 22-04-2016 SMGD1_RS07120 7be12aaf14b0b4c4b86071fad8d0d795 375 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 113 206 6.6E-12 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 SMGD1_RS07120 7be12aaf14b0b4c4b86071fad8d0d795 375 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 4 109 1.3E-19 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 SMGD1_RS07120 7be12aaf14b0b4c4b86071fad8d0d795 375 Gene3D G3DSA:1.20.140.10 210 372 8.0E-22 T 22-04-2016 SMGD1_RS07120 7be12aaf14b0b4c4b86071fad8d0d795 375 SUPERFAMILY SSF56645 4 215 3.4E-46 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 SMGD1_RS07120 7be12aaf14b0b4c4b86071fad8d0d795 375 PANTHER PTHR10909 4 353 2.7E-53 T 22-04-2016 SMGD1_RS07120 7be12aaf14b0b4c4b86071fad8d0d795 375 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 236 355 1.8E-14 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 SMGD1_RS07120 7be12aaf14b0b4c4b86071fad8d0d795 375 Gene3D G3DSA:1.10.540.10 3 110 2.3E-25 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 SMGD1_RS03845 621f19a97930e29156080f50483aac56 448 Pfam PF00448 SRP54-type protein, GTPase domain 94 288 4.9E-72 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 SMGD1_RS03845 621f19a97930e29156080f50483aac56 448 PANTHER PTHR11564:SF7 1 430 3.5E-169 T 22-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 SMGD1_RS03845 621f19a97930e29156080f50483aac56 448 Gene3D G3DSA:3.40.50.300 88 289 6.3E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS03845 621f19a97930e29156080f50483aac56 448 SUPERFAMILY SSF52540 88 291 2.52E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS03845 621f19a97930e29156080f50483aac56 448 SMART SM00963 1 79 3.3E-14 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 SMGD1_RS03845 621f19a97930e29156080f50483aac56 448 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 262 275 - T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 SMGD1_RS03845 621f19a97930e29156080f50483aac56 448 Gene3D G3DSA:1.20.120.140 2 79 7.6E-11 T 22-04-2016 SMGD1_RS03845 621f19a97930e29156080f50483aac56 448 SMART SM00382 93 267 4.7E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain SMGD1_RS03845 621f19a97930e29156080f50483aac56 448 Gene3D G3DSA:1.10.260.30 321 424 3.4E-34 T 22-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 SMGD1_RS03845 621f19a97930e29156080f50483aac56 448 SUPERFAMILY SSF47446 291 424 1.83E-42 T 22-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 SMGD1_RS03845 621f19a97930e29156080f50483aac56 448 Pfam PF02978 Signal peptide binding domain 320 420 6.0E-29 T 22-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 SMGD1_RS03845 621f19a97930e29156080f50483aac56 448 SMART SM00962 94 289 8.5E-100 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 SMGD1_RS03845 621f19a97930e29156080f50483aac56 448 SUPERFAMILY SSF47364 1 81 1.44E-13 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 SMGD1_RS03845 621f19a97930e29156080f50483aac56 448 PANTHER PTHR11564 1 430 3.5E-169 T 22-04-2016 SMGD1_RS03845 621f19a97930e29156080f50483aac56 448 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 422 9.4E-151 T 22-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 SMGD1_RS03845 621f19a97930e29156080f50483aac56 448 Pfam PF02881 SRP54-type protein, helical bundle domain 5 74 3.3E-9 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 SMGD1_RS11235 a602c66d25a7a595dcc9c1d6fcffd6fa 383 PANTHER PTHR30013 24 380 3.5E-169 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SMGD1_RS11235 a602c66d25a7a595dcc9c1d6fcffd6fa 383 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 84 230 8.4E-30 T 22-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 SMGD1_RS11235 a602c66d25a7a595dcc9c1d6fcffd6fa 383 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 255 273 3.3E-83 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SMGD1_RS11235 a602c66d25a7a595dcc9c1d6fcffd6fa 383 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 138 161 3.3E-83 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SMGD1_RS11235 a602c66d25a7a595dcc9c1d6fcffd6fa 383 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 69 91 3.3E-83 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SMGD1_RS11235 a602c66d25a7a595dcc9c1d6fcffd6fa 383 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 307 320 3.3E-83 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SMGD1_RS11235 a602c66d25a7a595dcc9c1d6fcffd6fa 383 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 183 207 3.3E-83 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SMGD1_RS11235 a602c66d25a7a595dcc9c1d6fcffd6fa 383 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 237 254 3.3E-83 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SMGD1_RS11235 a602c66d25a7a595dcc9c1d6fcffd6fa 383 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 211 234 3.3E-83 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SMGD1_RS11235 a602c66d25a7a595dcc9c1d6fcffd6fa 383 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 279 305 3.3E-83 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SMGD1_RS11235 a602c66d25a7a595dcc9c1d6fcffd6fa 383 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 92 116 3.3E-83 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SMGD1_RS11235 a602c66d25a7a595dcc9c1d6fcffd6fa 383 PIRSF PIRSF000310 27 383 2.8E-138 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SMGD1_RS11235 a602c66d25a7a595dcc9c1d6fcffd6fa 383 Pfam PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal 250 330 1.1E-31 T 22-04-2016 IPR027394 Cytochrome-c3 hydrogenase, C-terminal SMGD1_RS11235 a602c66d25a7a595dcc9c1d6fcffd6fa 383 PANTHER PTHR30013:SF7 24 380 3.5E-169 T 22-04-2016 SMGD1_RS11235 a602c66d25a7a595dcc9c1d6fcffd6fa 383 Gene3D G3DSA:4.10.480.10 250 333 7.4E-38 T 22-04-2016 IPR027394 Cytochrome-c3 hydrogenase, C-terminal SMGD1_RS11235 a602c66d25a7a595dcc9c1d6fcffd6fa 383 SUPERFAMILY SSF56770 72 334 1.09E-87 T 22-04-2016 SMGD1_RS11235 a602c66d25a7a595dcc9c1d6fcffd6fa 383 TIGRFAM TIGR00391 hydA: hydrogenase (NiFe) small subunit (hydA) 30 380 2.5E-158 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SMGD1_RS11235 a602c66d25a7a595dcc9c1d6fcffd6fa 383 Gene3D G3DSA:3.40.50.700 72 248 2.5E-54 T 22-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 SMGD1_RS11810 34a8c248d8350e1dd2db0152207cea9d 196 SUPERFAMILY SSF53639 1 185 5.49E-28 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal SMGD1_RS11810 34a8c248d8350e1dd2db0152207cea9d 196 SMART SM01007 8 185 3.2E-17 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal SMGD1_RS11810 34a8c248d8350e1dd2db0152207cea9d 196 Gene3D G3DSA:3.40.225.10 3 185 6.7E-17 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal SMGD1_RS11810 34a8c248d8350e1dd2db0152207cea9d 196 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 9 183 2.8E-20 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal SMGD1_RS09330 c9a6f006fe6afd03b4a3921879ecd87f 334 SUPERFAMILY SSF88713 122 334 3.33E-52 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 SMGD1_RS09330 c9a6f006fe6afd03b4a3921879ecd87f 334 PANTHER PTHR30105 115 334 1.3E-43 T 22-04-2016 SMGD1_RS09330 c9a6f006fe6afd03b4a3921879ecd87f 334 Gene3D G3DSA:3.20.20.370 121 333 7.0E-65 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 SMGD1_RS09330 c9a6f006fe6afd03b4a3921879ecd87f 334 Pfam PF04748 Divergent polysaccharide deacetylase 127 333 1.2E-58 T 22-04-2016 IPR006837 Protein of unknown function DUF610, YibQ SMGD1_RS08280 09fc0c4efd2197073f08c0ad885f7537 284 PANTHER PTHR24220 20 216 2.7E-73 T 22-04-2016 SMGD1_RS08280 09fc0c4efd2197073f08c0ad885f7537 284 SUPERFAMILY SSF52540 12 227 1.04E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS08280 09fc0c4efd2197073f08c0ad885f7537 284 SMART SM00382 27 205 2.7E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain SMGD1_RS08280 09fc0c4efd2197073f08c0ad885f7537 284 ProSitePatterns PS00211 ABC transporters family signature. 128 142 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMGD1_RS08280 09fc0c4efd2197073f08c0ad885f7537 284 Gene3D G3DSA:3.40.50.300 20 222 1.0E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS08280 09fc0c4efd2197073f08c0ad885f7537 284 Pfam PF00005 ABC transporter 20 155 4.6E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMGD1_RS10700 2faad51dba3c86f2d9d1936d60d8de26 417 TIGRFAM TIGR00836 amt: ammonium transporter 25 414 2.7E-122 T 22-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 SMGD1_RS10700 2faad51dba3c86f2d9d1936d60d8de26 417 Pfam PF00909 Ammonium Transporter Family 27 414 2.0E-109 T 22-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 SMGD1_RS10700 2faad51dba3c86f2d9d1936d60d8de26 417 PRINTS PR00342 Rhesus blood group protein signature 118 134 8.9E-8 T 22-04-2016 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 SMGD1_RS10700 2faad51dba3c86f2d9d1936d60d8de26 417 PRINTS PR00342 Rhesus blood group protein signature 277 290 8.9E-8 T 22-04-2016 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 SMGD1_RS10700 2faad51dba3c86f2d9d1936d60d8de26 417 PRINTS PR00342 Rhesus blood group protein signature 213 231 8.9E-8 T 22-04-2016 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 SMGD1_RS10700 2faad51dba3c86f2d9d1936d60d8de26 417 PRINTS PR00342 Rhesus blood group protein signature 333 349 8.9E-8 T 22-04-2016 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 SMGD1_RS10700 2faad51dba3c86f2d9d1936d60d8de26 417 PANTHER PTHR11730:SF17 18 417 7.8E-150 T 22-04-2016 SMGD1_RS10700 2faad51dba3c86f2d9d1936d60d8de26 417 Gene3D G3DSA:1.10.3430.10 18 392 2.5E-122 T 22-04-2016 IPR029020 Ammonium/urea transporter SMGD1_RS10700 2faad51dba3c86f2d9d1936d60d8de26 417 SUPERFAMILY SSF111352 21 391 1.83E-112 T 22-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 SMGD1_RS10700 2faad51dba3c86f2d9d1936d60d8de26 417 PANTHER PTHR11730 18 417 7.8E-150 T 22-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 SMGD1_RS10700 2faad51dba3c86f2d9d1936d60d8de26 417 ProSitePatterns PS01219 Ammonium transporters signature. 174 199 - T 22-04-2016 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 SMGD1_RS11465 dc3bacd25c89e81520139a7df0439a27 253 PANTHER PTHR11807 7 253 1.2E-55 T 22-04-2016 SMGD1_RS11465 dc3bacd25c89e81520139a7df0439a27 253 PIRSF PIRSF004976 1 253 1.5E-64 T 22-04-2016 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 SMGD1_RS11465 dc3bacd25c89e81520139a7df0439a27 253 Pfam PF01171 PP-loop family 29 198 1.2E-21 T 22-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal SMGD1_RS11465 dc3bacd25c89e81520139a7df0439a27 253 PANTHER PTHR11807:SF16 7 253 1.2E-55 T 22-04-2016 SMGD1_RS11465 dc3bacd25c89e81520139a7df0439a27 253 Gene3D G3DSA:3.40.50.620 25 186 5.2E-21 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMGD1_RS11465 dc3bacd25c89e81520139a7df0439a27 253 SUPERFAMILY SSF52402 16 245 4.41E-47 T 22-04-2016 SMGD1_RS13850 558d47823244b2b926ca6e18d1050d0e 293 Pfam PF00892 EamA-like transporter family 7 140 1.4E-7 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SMGD1_RS13850 558d47823244b2b926ca6e18d1050d0e 293 Pfam PF00892 EamA-like transporter family 148 282 2.2E-17 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SMGD1_RS13850 558d47823244b2b926ca6e18d1050d0e 293 SUPERFAMILY SSF103481 182 284 2.22E-13 T 22-04-2016 SMGD1_RS13850 558d47823244b2b926ca6e18d1050d0e 293 PANTHER PTHR22911 1 283 8.1E-23 T 22-04-2016 SMGD1_RS02920 845cef42eb27db35bad1b2f7a24da63e 234 Pfam PF03892 Nitrate reductase cytochrome c-type subunit (NapB) 38 184 9.6E-28 T 22-04-2016 IPR005591 Nitrate reductase cytochrome c-type subunit NapB SMGD1_RS02920 845cef42eb27db35bad1b2f7a24da63e 234 SUPERFAMILY SSF48695 59 189 1.68E-25 T 22-04-2016 IPR011031 Multihaem cytochrome SMGD1_RS02920 845cef42eb27db35bad1b2f7a24da63e 234 Gene3D G3DSA:4.10.1020.10 82 171 6.2E-25 T 22-04-2016 IPR027406 Periplasmic nitrate reductase NapB subunit, heme binding domain SMGD1_RS02985 32e2dc4c9bdeaa4c66758051dcd79e86 313 SMART SM00260 11 160 5.8E-38 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SMGD1_RS02985 32e2dc4c9bdeaa4c66758051dcd79e86 313 PANTHER PTHR22617 33 176 1.9E-29 T 22-04-2016 SMGD1_RS02985 32e2dc4c9bdeaa4c66758051dcd79e86 313 SUPERFAMILY SSF52172 184 309 3.56E-24 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS02985 32e2dc4c9bdeaa4c66758051dcd79e86 313 Gene3D G3DSA:2.40.50.180 62 99 1.7E-5 T 22-04-2016 SMGD1_RS02985 32e2dc4c9bdeaa4c66758051dcd79e86 313 PIRSF PIRSF002867 2 312 6.9E-96 T 22-04-2016 IPR024181 Chemotaxis response regulator CheV SMGD1_RS02985 32e2dc4c9bdeaa4c66758051dcd79e86 313 Pfam PF00072 Response regulator receiver domain 185 294 4.1E-14 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS02985 32e2dc4c9bdeaa4c66758051dcd79e86 313 Gene3D G3DSA:2.30.30.40 100 152 1.6E-10 T 22-04-2016 SMGD1_RS02985 32e2dc4c9bdeaa4c66758051dcd79e86 313 SUPERFAMILY SSF50341 12 162 3.79E-30 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SMGD1_RS02985 32e2dc4c9bdeaa4c66758051dcd79e86 313 SMART SM00448 182 308 1.3E-19 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS02985 32e2dc4c9bdeaa4c66758051dcd79e86 313 Pfam PF01584 CheW-like domain 29 162 2.4E-35 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SMGD1_RS02985 32e2dc4c9bdeaa4c66758051dcd79e86 313 Gene3D G3DSA:3.40.50.2300 185 310 3.3E-26 T 22-04-2016 SMGD1_RS00060 0c5fc360c1bbc318b8507d0fdabf4933 422 PANTHER PTHR10799 1 32 2.5E-29 T 22-04-2016 SMGD1_RS00060 0c5fc360c1bbc318b8507d0fdabf4933 422 PANTHER PTHR10799 297 416 2.5E-29 T 22-04-2016 SMGD1_RS00060 0c5fc360c1bbc318b8507d0fdabf4933 422 Gene3D G3DSA:3.40.50.2300 6 135 2.9E-24 T 22-04-2016 SMGD1_RS00060 0c5fc360c1bbc318b8507d0fdabf4933 422 SMART SM00448 8 114 4.9E-16 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS00060 0c5fc360c1bbc318b8507d0fdabf4933 422 SUPERFAMILY SSF52172 7 137 6.83E-25 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS00060 0c5fc360c1bbc318b8507d0fdabf4933 422 SUPERFAMILY SSF55073 269 419 2.9E-45 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS00060 0c5fc360c1bbc318b8507d0fdabf4933 422 Pfam PF00990 Diguanylate cyclase, GGDEF domain 265 416 1.5E-44 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS00060 0c5fc360c1bbc318b8507d0fdabf4933 422 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 265 418 4.0E-47 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS00060 0c5fc360c1bbc318b8507d0fdabf4933 422 Gene3D G3DSA:3.30.70.270 266 419 2.4E-49 T 22-04-2016 SMGD1_RS00060 0c5fc360c1bbc318b8507d0fdabf4933 422 SMART SM00267 253 421 2.4E-48 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS00060 0c5fc360c1bbc318b8507d0fdabf4933 422 Pfam PF00072 Response regulator receiver domain 10 114 1.6E-18 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS00060 0c5fc360c1bbc318b8507d0fdabf4933 422 PANTHER PTHR10799:SF750 1 32 2.5E-29 T 22-04-2016 SMGD1_RS00060 0c5fc360c1bbc318b8507d0fdabf4933 422 PANTHER PTHR10799:SF750 297 416 2.5E-29 T 22-04-2016 SMGD1_RS13535 b9eea76106ab342b47739f8e11b9cb82 164 Pfam PF08282 haloacid dehalogenase-like hydrolase 77 142 1.9E-10 T 22-04-2016 IPR023214 HAD-like domain SMGD1_RS13535 b9eea76106ab342b47739f8e11b9cb82 164 SUPERFAMILY SSF56784 1 149 2.1E-37 T 22-04-2016 IPR023214 HAD-like domain SMGD1_RS13535 b9eea76106ab342b47739f8e11b9cb82 164 PANTHER PTHR21485 2 149 6.6E-40 T 22-04-2016 SMGD1_RS13535 b9eea76106ab342b47739f8e11b9cb82 164 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 2 153 4.0E-50 T 22-04-2016 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 SMGD1_RS13535 b9eea76106ab342b47739f8e11b9cb82 164 Gene3D G3DSA:3.40.50.1000 1 148 2.0E-39 T 22-04-2016 IPR023214 HAD-like domain SMGD1_RS13535 b9eea76106ab342b47739f8e11b9cb82 164 PIRSF PIRSF006118 1 164 7.7E-58 T 22-04-2016 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 SMGD1_RS11630 3df920dc9e3efff381a1a364fbb81ff5 224 Hamap MF_01393 ATP synthase subunit a [atpB]. 11 222 14.53 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SMGD1_RS11630 3df920dc9e3efff381a1a364fbb81ff5 224 Gene3D G3DSA:1.20.120.220 71 219 9.2E-41 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SMGD1_RS11630 3df920dc9e3efff381a1a364fbb81ff5 224 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 15 218 2.8E-38 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SMGD1_RS11630 3df920dc9e3efff381a1a364fbb81ff5 224 SUPERFAMILY SSF81336 71 215 1.11E-36 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SMGD1_RS11630 3df920dc9e3efff381a1a364fbb81ff5 224 PRINTS PR00123 ATP synthase A subunit signature 158 180 5.8E-12 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SMGD1_RS11630 3df920dc9e3efff381a1a364fbb81ff5 224 PRINTS PR00123 ATP synthase A subunit signature 78 94 5.8E-12 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SMGD1_RS11630 3df920dc9e3efff381a1a364fbb81ff5 224 PRINTS PR00123 ATP synthase A subunit signature 202 217 5.8E-12 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SMGD1_RS11630 3df920dc9e3efff381a1a364fbb81ff5 224 PANTHER PTHR11410:SF7 18 224 1.1E-53 T 22-04-2016 SMGD1_RS11630 3df920dc9e3efff381a1a364fbb81ff5 224 Pfam PF00119 ATP synthase A chain 23 215 3.7E-49 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SMGD1_RS11630 3df920dc9e3efff381a1a364fbb81ff5 224 ProSitePatterns PS00449 ATP synthase a subunit signature. 161 170 - T 22-04-2016 IPR023011 ATPase, F0 complex, subunit A, active site SMGD1_RS11630 3df920dc9e3efff381a1a364fbb81ff5 224 PANTHER PTHR11410 18 224 1.1E-53 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SMGD1_RS02665 636bba46ea46498d0a71e7eb3e9d2da6 95 PANTHER PTHR33336:SF5 1 75 5.6E-14 T 22-04-2016 SMGD1_RS02665 636bba46ea46498d0a71e7eb3e9d2da6 95 SUPERFAMILY SSF54909 1 86 2.6E-21 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel SMGD1_RS02665 636bba46ea46498d0a71e7eb3e9d2da6 95 Pfam PF03992 Antibiotic biosynthesis monooxygenase 6 75 9.5E-12 T 22-04-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain SMGD1_RS02665 636bba46ea46498d0a71e7eb3e9d2da6 95 Gene3D G3DSA:3.30.70.900 2 86 5.9E-23 T 22-04-2016 SMGD1_RS02665 636bba46ea46498d0a71e7eb3e9d2da6 95 PANTHER PTHR33336 1 75 5.6E-14 T 22-04-2016 SMGD1_RS01505 69d83580152acbac0c4f4a10a06200b7 447 Gene3D G3DSA:3.90.1300.10 43 444 3.1E-145 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SMGD1_RS01505 69d83580152acbac0c4f4a10a06200b7 447 Pfam PF01425 Amidase 43 432 1.4E-138 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SMGD1_RS01505 69d83580152acbac0c4f4a10a06200b7 447 PANTHER PTHR11895:SF7 25 446 6.1E-175 T 22-04-2016 SMGD1_RS01505 69d83580152acbac0c4f4a10a06200b7 447 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 3 443 1.7E-170 T 22-04-2016 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SMGD1_RS01505 69d83580152acbac0c4f4a10a06200b7 447 PANTHER PTHR11895 25 446 6.1E-175 T 22-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SMGD1_RS01505 69d83580152acbac0c4f4a10a06200b7 447 ProSitePatterns PS00571 Amidases signature. 123 154 - T 22-04-2016 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SMGD1_RS01505 69d83580152acbac0c4f4a10a06200b7 447 SUPERFAMILY SSF75304 27 444 1.57E-134 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SMGD1_RS01505 69d83580152acbac0c4f4a10a06200b7 447 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 4 444 79.256 T 22-04-2016 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SMGD1_RS12060 e144c1470a47e26fa2d09af09670b570 369 SUPERFAMILY SSF48695 23 211 6.94E-18 T 22-04-2016 IPR011031 Multihaem cytochrome SMGD1_RS12060 e144c1470a47e26fa2d09af09670b570 369 Gene3D G3DSA:1.10.710.10 22 214 1.2E-13 T 22-04-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 SMGD1_RS12060 e144c1470a47e26fa2d09af09670b570 369 Pfam PF13435 Cytochrome c554 and c-prime 29 114 5.9E-7 T 22-04-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 SMGD1_RS02125 800c60c813be68d6f50d9f239d3e4672 427 PANTHER PTHR10799 295 426 1.9E-20 T 22-04-2016 SMGD1_RS02125 800c60c813be68d6f50d9f239d3e4672 427 PANTHER PTHR10799 1 51 1.9E-20 T 22-04-2016 SMGD1_RS02125 800c60c813be68d6f50d9f239d3e4672 427 SUPERFAMILY SSF55073 267 426 3.73E-41 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS02125 800c60c813be68d6f50d9f239d3e4672 427 SMART SM00267 252 427 4.4E-43 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS02125 800c60c813be68d6f50d9f239d3e4672 427 Pfam PF00990 Diguanylate cyclase, GGDEF domain 263 425 4.3E-38 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS02125 800c60c813be68d6f50d9f239d3e4672 427 Pfam PF13682 Chemoreceptor zinc-binding domain 155 220 1.4E-8 T 22-04-2016 IPR025991 Chemoreceptor zinc-binding domain UniPathway: UPA00599 SMGD1_RS02125 800c60c813be68d6f50d9f239d3e4672 427 Gene3D G3DSA:3.30.70.270 265 426 5.2E-45 T 22-04-2016 SMGD1_RS02125 800c60c813be68d6f50d9f239d3e4672 427 PANTHER PTHR10799:SF750 295 426 1.9E-20 T 22-04-2016 SMGD1_RS02125 800c60c813be68d6f50d9f239d3e4672 427 PANTHER PTHR10799:SF750 1 51 1.9E-20 T 22-04-2016 SMGD1_RS02125 800c60c813be68d6f50d9f239d3e4672 427 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 261 426 2.3E-45 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS06290 d4221036f1ca9c18b705443f8e945726 416 Gene3D G3DSA:1.10.3090.10 150 336 1.0E-30 T 22-04-2016 SMGD1_RS06290 d4221036f1ca9c18b705443f8e945726 416 SUPERFAMILY SSF81301 4 147 1.47E-26 T 22-04-2016 SMGD1_RS06290 d4221036f1ca9c18b705443f8e945726 416 PANTHER PTHR13734 2 233 3.0E-35 T 22-04-2016 SMGD1_RS06290 d4221036f1ca9c18b705443f8e945726 416 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 177 236 6.7E-8 T 22-04-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain SMGD1_RS06290 d4221036f1ca9c18b705443f8e945726 416 Pfam PF01743 Poly A polymerase head domain 23 149 2.5E-18 T 22-04-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 SMGD1_RS06290 d4221036f1ca9c18b705443f8e945726 416 SUPERFAMILY SSF81891 149 414 4.45E-35 T 22-04-2016 SMGD1_RS06290 d4221036f1ca9c18b705443f8e945726 416 Gene3D G3DSA:3.30.460.10 5 149 7.8E-31 T 22-04-2016 SMGD1_RS07815 a221601cf406e3e59cf174732b228f46 109 PANTHER PTHR34039:SF1 1 99 1.6E-23 T 22-04-2016 SMGD1_RS07815 a221601cf406e3e59cf174732b228f46 109 PANTHER PTHR34039 1 99 1.6E-23 T 22-04-2016 SMGD1_RS07815 a221601cf406e3e59cf174732b228f46 109 SUPERFAMILY SSF52980 8 103 1.02E-23 T 22-04-2016 IPR011335 Restriction endonuclease type II-like SMGD1_RS07815 a221601cf406e3e59cf174732b228f46 109 Hamap MF_00048 UPF0102 protein YraN [yraN]. 2 109 18.42 T 22-04-2016 IPR003509 Uncharacterised protein family UPF0102 SMGD1_RS07815 a221601cf406e3e59cf174732b228f46 109 Gene3D G3DSA:3.40.1350.10 9 107 1.5E-25 T 22-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 SMGD1_RS07815 a221601cf406e3e59cf174732b228f46 109 Pfam PF02021 Uncharacterised protein family UPF0102 9 87 2.0E-20 T 22-04-2016 IPR003509 Uncharacterised protein family UPF0102 SMGD1_RS11205 9850ebbd5f0816ebcd6436f8bf5ce52f 231 Gene3D G3DSA:1.20.950.20 2 225 1.5E-27 T 22-04-2016 SMGD1_RS11205 9850ebbd5f0816ebcd6436f8bf5ce52f 231 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 11 34 1.5E-10 T 22-04-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 SMGD1_RS11205 9850ebbd5f0816ebcd6436f8bf5ce52f 231 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 51 75 1.5E-10 T 22-04-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 SMGD1_RS11205 9850ebbd5f0816ebcd6436f8bf5ce52f 231 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 216 229 1.5E-10 T 22-04-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 SMGD1_RS11205 9850ebbd5f0816ebcd6436f8bf5ce52f 231 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 185 207 1.5E-10 T 22-04-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 SMGD1_RS11205 9850ebbd5f0816ebcd6436f8bf5ce52f 231 Pfam PF01292 Prokaryotic cytochrome b561 8 220 1.9E-17 T 22-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 SMGD1_RS11205 9850ebbd5f0816ebcd6436f8bf5ce52f 231 SUPERFAMILY SSF81342 3 209 3.01E-15 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 SMGD1_RS11205 9850ebbd5f0816ebcd6436f8bf5ce52f 231 PANTHER PTHR30485:SF0 13 230 1.8E-15 T 22-04-2016 SMGD1_RS11205 9850ebbd5f0816ebcd6436f8bf5ce52f 231 PANTHER PTHR30485 13 230 1.8E-15 T 22-04-2016 SMGD1_RS13385 114ec0f5b1039f3372ef0cfc3279a57c 94 Pfam PF02325 YGGT family 18 86 7.9E-17 T 22-04-2016 IPR003425 CCB3/YggT GO:0016020 SMGD1_RS11390 dbe56207fc500c94ade7346a0109d030 505 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 28 94 1.1E-13 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SMGD1_RS11390 dbe56207fc500c94ade7346a0109d030 505 PANTHER PTHR15184 1 487 9.7E-298 T 22-04-2016 SMGD1_RS11390 dbe56207fc500c94ade7346a0109d030 505 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 357 366 - T 22-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SMGD1_RS11390 dbe56207fc500c94ade7346a0109d030 505 SUPERFAMILY SSF50615 12 95 3.66E-26 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SMGD1_RS11390 dbe56207fc500c94ade7346a0109d030 505 PANTHER PTHR15184:SF3 1 487 9.7E-298 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SMGD1_RS11390 dbe56207fc500c94ade7346a0109d030 505 Gene3D G3DSA:3.40.50.300 97 373 6.5E-120 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS11390 dbe56207fc500c94ade7346a0109d030 505 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 3 503 51.305 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SMGD1_RS11390 dbe56207fc500c94ade7346a0109d030 505 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 5 503 4.7E-254 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SMGD1_RS11390 dbe56207fc500c94ade7346a0109d030 505 PIRSF PIRSF039088 3 505 5.8E-254 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SMGD1_RS11390 dbe56207fc500c94ade7346a0109d030 505 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 151 366 1.4E-75 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SMGD1_RS11390 dbe56207fc500c94ade7346a0109d030 505 Gene3D G3DSA:1.20.150.20 374 502 4.3E-50 T 22-04-2016 SMGD1_RS11390 dbe56207fc500c94ade7346a0109d030 505 Gene3D G3DSA:2.40.30.20 4 95 2.6E-33 T 22-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SMGD1_RS11390 dbe56207fc500c94ade7346a0109d030 505 SUPERFAMILY SSF52540 98 372 2.66E-101 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS11390 dbe56207fc500c94ade7346a0109d030 505 SUPERFAMILY SSF47917 374 502 2.88E-45 T 22-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SMGD1_RS11390 dbe56207fc500c94ade7346a0109d030 505 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 373 498 1.5E-45 T 22-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SMGD1_RS09010 8fbecfea25b0a1d58cee33d6efaae521 333 Gene3D G3DSA:3.40.50.620 8 163 4.6E-18 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMGD1_RS09010 8fbecfea25b0a1d58cee33d6efaae521 333 PANTHER PTHR11807 4 323 6.5E-39 T 22-04-2016 SMGD1_RS09010 8fbecfea25b0a1d58cee33d6efaae521 333 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 15 189 2.1E-49 T 22-04-2016 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 SMGD1_RS09010 8fbecfea25b0a1d58cee33d6efaae521 333 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 7 268 19.156 T 22-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 SMGD1_RS09010 8fbecfea25b0a1d58cee33d6efaae521 333 PANTHER PTHR11807:SF2 4 323 6.5E-39 T 22-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 SMGD1_RS09010 8fbecfea25b0a1d58cee33d6efaae521 333 Pfam PF01171 PP-loop family 15 188 5.3E-50 T 22-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal SMGD1_RS09010 8fbecfea25b0a1d58cee33d6efaae521 333 SUPERFAMILY SSF52402 9 195 1.52E-43 T 22-04-2016 SMGD1_RS13345 083eaa79d416ffb0c8c7695f42be3b9b 205 PANTHER PTHR30055 1 183 8.1E-19 T 22-04-2016 SMGD1_RS13345 083eaa79d416ffb0c8c7695f42be3b9b 205 SUPERFAMILY SSF46689 4 68 4.32E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SMGD1_RS13345 083eaa79d416ffb0c8c7695f42be3b9b 205 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 63 2.8E-14 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SMGD1_RS13345 083eaa79d416ffb0c8c7695f42be3b9b 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 2.6E-9 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SMGD1_RS13345 083eaa79d416ffb0c8c7695f42be3b9b 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 2.6E-9 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SMGD1_RS13345 083eaa79d416ffb0c8c7695f42be3b9b 205 Gene3D G3DSA:1.10.357.10 7 202 2.5E-33 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SMGD1_RS09135 1eb6f2732f0163b9201638fde00a6109 716 SUPERFAMILY SSF52129 475 708 1.36E-7 T 22-04-2016 IPR029030 Caspase-like domain SMGD1_RS09135 1eb6f2732f0163b9201638fde00a6109 716 Pfam PF00656 Caspase domain 484 707 8.8E-17 T 22-04-2016 SMGD1_RS09135 1eb6f2732f0163b9201638fde00a6109 716 SMART SM00245 216 404 4.3E-60 T 22-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 SMGD1_RS09135 1eb6f2732f0163b9201638fde00a6109 716 Pfam PF13180 PDZ domain 145 222 4.4E-12 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SMGD1_RS09135 1eb6f2732f0163b9201638fde00a6109 716 Gene3D G3DSA:3.90.226.10 225 426 3.6E-58 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SMGD1_RS09135 1eb6f2732f0163b9201638fde00a6109 716 SUPERFAMILY SSF50156 134 224 2.68E-18 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SMGD1_RS09135 1eb6f2732f0163b9201638fde00a6109 716 Gene3D G3DSA:3.30.750.44 86 150 6.1E-4 T 22-04-2016 SMGD1_RS09135 1eb6f2732f0163b9201638fde00a6109 716 Gene3D G3DSA:3.40.50.1460 482 614 4.2E-16 T 22-04-2016 IPR029030 Caspase-like domain SMGD1_RS09135 1eb6f2732f0163b9201638fde00a6109 716 Pfam PF03572 Peptidase family S41 241 403 4.9E-47 T 22-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 SMGD1_RS09135 1eb6f2732f0163b9201638fde00a6109 716 SMART SM00228 145 216 1.6E-15 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SMGD1_RS09135 1eb6f2732f0163b9201638fde00a6109 716 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 103 408 2.0E-91 T 22-04-2016 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 SMGD1_RS09135 1eb6f2732f0163b9201638fde00a6109 716 PANTHER PTHR32060 105 475 1.5E-95 T 22-04-2016 SMGD1_RS09135 1eb6f2732f0163b9201638fde00a6109 716 SUPERFAMILY SSF52096 235 415 4.31E-63 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SMGD1_RS09135 1eb6f2732f0163b9201638fde00a6109 716 SUPERFAMILY SSF52096 88 163 4.31E-63 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SMGD1_RS09135 1eb6f2732f0163b9201638fde00a6109 716 Gene3D G3DSA:2.30.42.10 151 224 5.9E-24 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SMGD1_RS08135 ec940685ba1d4150bb20a6ed77459fef 451 PANTHER PTHR19353 105 439 5.8E-56 T 22-04-2016 SMGD1_RS08135 ec940685ba1d4150bb20a6ed77459fef 451 PANTHER PTHR19353:SF30 105 439 5.8E-56 T 22-04-2016 SMGD1_RS08135 ec940685ba1d4150bb20a6ed77459fef 451 Pfam PF00487 Fatty acid desaturase 137 426 2.5E-29 T 22-04-2016 IPR005804 Fatty acid desaturase domain GO:0006629 SMGD1_RS09045 17be5346c3491fc3d3f521b557fa4836 527 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 248 263 - T 22-04-2016 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 SMGD1_RS09045 17be5346c3491fc3d3f521b557fa4836 527 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 4 524 2.4E-224 T 22-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 SMGD1_RS09045 17be5346c3491fc3d3f521b557fa4836 527 Gene3D G3DSA:3.40.449.10 16 209 3.3E-75 T 22-04-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 SMGD1_RS09045 17be5346c3491fc3d3f521b557fa4836 527 SUPERFAMILY SSF68923 4 210 1.67E-76 T 22-04-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 SMGD1_RS09045 17be5346c3491fc3d3f521b557fa4836 527 SUPERFAMILY SSF53795 212 517 8.47E-130 T 22-04-2016 SMGD1_RS09045 17be5346c3491fc3d3f521b557fa4836 527 Gene3D G3DSA:3.90.228.20 333 523 4.9E-119 T 22-04-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 SMGD1_RS09045 17be5346c3491fc3d3f521b557fa4836 527 Gene3D G3DSA:3.90.228.20 212 273 4.9E-119 T 22-04-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 SMGD1_RS09045 17be5346c3491fc3d3f521b557fa4836 527 Pfam PF01293 Phosphoenolpyruvate carboxykinase 16 476 1.1E-213 T 22-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 SMGD1_RS09045 17be5346c3491fc3d3f521b557fa4836 527 PIRSF PIRSF006294 1 525 2.9E-229 T 22-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 SMGD1_RS09045 17be5346c3491fc3d3f521b557fa4836 527 PANTHER PTHR30031:SF0 4 526 5.9E-296 T 22-04-2016 SMGD1_RS09045 17be5346c3491fc3d3f521b557fa4836 527 PANTHER PTHR30031 4 526 5.9E-296 T 22-04-2016 SMGD1_RS09045 17be5346c3491fc3d3f521b557fa4836 527 Hamap MF_00453 Phosphoenolpyruvate carboxykinase [ATP] [pckA]. 10 523 53.637 T 22-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 SMGD1_RS03600 2161a8921639278ad89817985c2c3c75 237 ProSitePatterns PS01058 SAICAR synthetase signature 2. 174 182 - T 22-04-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 SMGD1_RS03600 2161a8921639278ad89817985c2c3c75 237 Pfam PF01259 SAICAR synthetase 6 233 4.1E-60 T 22-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 SMGD1_RS03600 2161a8921639278ad89817985c2c3c75 237 PANTHER PTHR11609:SF2 3 234 1.8E-105 T 22-04-2016 SMGD1_RS03600 2161a8921639278ad89817985c2c3c75 237 ProSitePatterns PS01057 SAICAR synthetase signature 1. 86 100 - T 22-04-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 SMGD1_RS03600 2161a8921639278ad89817985c2c3c75 237 PANTHER PTHR11609 3 234 1.8E-105 T 22-04-2016 SMGD1_RS03600 2161a8921639278ad89817985c2c3c75 237 Gene3D G3DSA:3.30.200.20 6 93 1.2E-35 T 22-04-2016 SMGD1_RS03600 2161a8921639278ad89817985c2c3c75 237 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 5 234 3.0E-72 T 22-04-2016 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 SMGD1_RS03600 2161a8921639278ad89817985c2c3c75 237 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 4 236 30.332 T 22-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 SMGD1_RS03600 2161a8921639278ad89817985c2c3c75 237 Gene3D G3DSA:3.30.470.20 94 221 1.7E-47 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SMGD1_RS03600 2161a8921639278ad89817985c2c3c75 237 SUPERFAMILY SSF56104 3 236 1.9E-76 T 22-04-2016 SMGD1_RS08625 5659cb15f77e92c17ed64189d8df6320 399 Pfam PF03553 Na+/H+ antiporter family 107 395 4.5E-51 T 22-04-2016 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 SMGD1_RS08625 5659cb15f77e92c17ed64189d8df6320 399 PANTHER PTHR33451 1 396 2.2E-94 T 22-04-2016 SMGD1_RS08625 5659cb15f77e92c17ed64189d8df6320 399 PANTHER PTHR33451:SF7 1 396 2.2E-94 T 22-04-2016 SMGD1_RS13310 dc1aed7e38be6a1ca8396c7f74d65477 185 Pfam PF05683 Fumarase C-terminus 10 176 7.9E-58 T 22-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 SMGD1_RS13310 dc1aed7e38be6a1ca8396c7f74d65477 185 PANTHER PTHR30389 5 183 3.0E-95 T 22-04-2016 SMGD1_RS13310 dc1aed7e38be6a1ca8396c7f74d65477 185 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 15 176 1.0E-55 T 22-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 SMGD1_RS13310 dc1aed7e38be6a1ca8396c7f74d65477 185 Gene3D G3DSA:3.20.130.10 3 176 5.2E-73 T 22-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 SMGD1_RS13310 dc1aed7e38be6a1ca8396c7f74d65477 185 SUPERFAMILY SSF117457 5 176 2.48E-64 T 22-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 SMGD1_RS12495 9c1a6aba85956c1060937d2da0182b53 344 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 3 340 36.451 T 22-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 SMGD1_RS12495 9c1a6aba85956c1060937d2da0182b53 344 Gene3D G3DSA:2.40.30.10 281 343 1.3E-19 T 22-04-2016 SMGD1_RS12495 9c1a6aba85956c1060937d2da0182b53 344 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 3 339 1.5E-101 T 22-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 SMGD1_RS12495 9c1a6aba85956c1060937d2da0182b53 344 Gene3D G3DSA:3.40.50.620 2 199 2.4E-69 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMGD1_RS12495 9c1a6aba85956c1060937d2da0182b53 344 SUPERFAMILY SSF52402 1 234 2.87E-50 T 22-04-2016 SMGD1_RS12495 9c1a6aba85956c1060937d2da0182b53 344 PANTHER PTHR11933:SF10 1 344 1.0E-119 T 22-04-2016 SMGD1_RS12495 9c1a6aba85956c1060937d2da0182b53 344 Pfam PF03054 tRNA methyl transferase 3 339 5.0E-106 T 22-04-2016 SMGD1_RS12495 9c1a6aba85956c1060937d2da0182b53 344 Gene3D G3DSA:2.30.30.280 208 264 5.3E-15 T 22-04-2016 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 SMGD1_RS12495 9c1a6aba85956c1060937d2da0182b53 344 PANTHER PTHR11933 1 344 1.0E-119 T 22-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 SMGD1_RS10245 95dc16edeb7cfd69549dd6032d1d6a58 229 SUPERFAMILY SSF53300 14 191 1.83E-21 T 22-04-2016 IPR002035 von Willebrand factor, type A SMGD1_RS10245 95dc16edeb7cfd69549dd6032d1d6a58 229 SMART SM00327 15 196 5.9E-10 T 22-04-2016 IPR002035 von Willebrand factor, type A SMGD1_RS10245 95dc16edeb7cfd69549dd6032d1d6a58 229 Gene3D G3DSA:3.40.50.410 16 192 3.6E-15 T 22-04-2016 IPR002035 von Willebrand factor, type A SMGD1_RS10245 95dc16edeb7cfd69549dd6032d1d6a58 229 Pfam PF00092 von Willebrand factor type A domain 18 184 6.3E-12 T 22-04-2016 IPR002035 von Willebrand factor, type A SMGD1_RS03110 9141b1f98ed2e762a9734b6a60fe1a12 464 SMART SM00388 249 316 1.1E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS03110 9141b1f98ed2e762a9734b6a60fe1a12 464 Gene3D G3DSA:3.30.450.20 36 151 2.7E-7 T 22-04-2016 SMGD1_RS03110 9141b1f98ed2e762a9734b6a60fe1a12 464 SMART SM00387 358 462 3.5E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS03110 9141b1f98ed2e762a9734b6a60fe1a12 464 SUPERFAMILY SSF47384 238 317 6.67E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS03110 9141b1f98ed2e762a9734b6a60fe1a12 464 Gene3D G3DSA:1.10.287.130 242 307 3.7E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS03110 9141b1f98ed2e762a9734b6a60fe1a12 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 422 440 1.0E-5 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS03110 9141b1f98ed2e762a9734b6a60fe1a12 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 446 459 1.0E-5 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS03110 9141b1f98ed2e762a9734b6a60fe1a12 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 403 1.0E-5 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS03110 9141b1f98ed2e762a9734b6a60fe1a12 464 PANTHER PTHR24423 235 458 2.7E-47 T 22-04-2016 SMGD1_RS03110 9141b1f98ed2e762a9734b6a60fe1a12 464 Pfam PF00512 His Kinase A (phospho-acceptor) domain 250 308 1.9E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS03110 9141b1f98ed2e762a9734b6a60fe1a12 464 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 362 460 1.1E-14 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS03110 9141b1f98ed2e762a9734b6a60fe1a12 464 Gene3D G3DSA:3.30.565.10 318 458 1.5E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS03110 9141b1f98ed2e762a9734b6a60fe1a12 464 SUPERFAMILY SSF55874 308 459 4.19E-27 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS00320 e388d1b1f5ece2e5f9f08e907a675ca0 217 SMART SM00448 1 112 6.6E-33 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS00320 e388d1b1f5ece2e5f9f08e907a675ca0 217 Pfam PF00072 Response regulator receiver domain 3 112 2.1E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS00320 e388d1b1f5ece2e5f9f08e907a675ca0 217 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 214 6.6E-14 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMGD1_RS00320 e388d1b1f5ece2e5f9f08e907a675ca0 217 SUPERFAMILY SSF52172 1 183 3.84E-35 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS00320 e388d1b1f5ece2e5f9f08e907a675ca0 217 SMART SM00862 146 215 2.3E-16 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMGD1_RS00320 e388d1b1f5ece2e5f9f08e907a675ca0 217 PANTHER PTHR26402:SF578 1 216 6.1E-47 T 22-04-2016 SMGD1_RS00320 e388d1b1f5ece2e5f9f08e907a675ca0 217 Gene3D G3DSA:1.10.10.10 127 216 1.7E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMGD1_RS00320 e388d1b1f5ece2e5f9f08e907a675ca0 217 Gene3D G3DSA:3.40.50.2300 1 117 1.3E-30 T 22-04-2016 SMGD1_RS00320 e388d1b1f5ece2e5f9f08e907a675ca0 217 PANTHER PTHR26402 1 216 6.1E-47 T 22-04-2016 SMGD1_RS04520 8054995d3b2db900585b69aa49e5d110 646 SUPERFAMILY SSF56281 387 626 7.99E-32 T 22-04-2016 IPR001279 Metallo-beta-lactamase SMGD1_RS04520 8054995d3b2db900585b69aa49e5d110 646 PANTHER PTHR11347 11 141 9.1E-32 T 22-04-2016 SMGD1_RS04520 8054995d3b2db900585b69aa49e5d110 646 PANTHER PTHR11347 245 263 9.1E-32 T 22-04-2016 SMGD1_RS04520 8054995d3b2db900585b69aa49e5d110 646 Pfam PF02112 cAMP phosphodiesterases class-II 396 598 4.9E-14 T 22-04-2016 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 SMGD1_RS04520 8054995d3b2db900585b69aa49e5d110 646 Gene3D G3DSA:3.30.450.40 9 176 2.1E-39 T 22-04-2016 IPR029016 GAF domain-like SMGD1_RS04520 8054995d3b2db900585b69aa49e5d110 646 Pfam PF01966 HD domain 196 318 2.3E-18 T 22-04-2016 IPR006674 HD domain SMGD1_RS04520 8054995d3b2db900585b69aa49e5d110 646 SUPERFAMILY SSF109604 180 359 5.34E-36 T 22-04-2016 SMGD1_RS04520 8054995d3b2db900585b69aa49e5d110 646 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 463 484 3.6E-9 T 22-04-2016 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 SMGD1_RS04520 8054995d3b2db900585b69aa49e5d110 646 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 580 593 3.6E-9 T 22-04-2016 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 SMGD1_RS04520 8054995d3b2db900585b69aa49e5d110 646 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 431 449 3.6E-9 T 22-04-2016 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 SMGD1_RS04520 8054995d3b2db900585b69aa49e5d110 646 SMART SM00471 191 328 1.1E-8 T 22-04-2016 IPR003607 HD/PDEase domain SMGD1_RS04520 8054995d3b2db900585b69aa49e5d110 646 Pfam PF01590 GAF domain 38 159 1.0E-11 T 22-04-2016 IPR003018 GAF domain GO:0005515 SMGD1_RS04520 8054995d3b2db900585b69aa49e5d110 646 SUPERFAMILY SSF55781 11 179 1.7E-34 T 22-04-2016 IPR029016 GAF domain-like SMGD1_RS04520 8054995d3b2db900585b69aa49e5d110 646 Gene3D G3DSA:3.60.15.10 386 640 1.7E-27 T 22-04-2016 IPR001279 Metallo-beta-lactamase SMGD1_RS04520 8054995d3b2db900585b69aa49e5d110 646 Gene3D G3DSA:1.10.3210.10 191 355 2.3E-17 T 22-04-2016 IPR006674 HD domain SMGD1_RS04520 8054995d3b2db900585b69aa49e5d110 646 SMART SM00849 400 607 0.0099 T 22-04-2016 IPR001279 Metallo-beta-lactamase SMGD1_RS04520 8054995d3b2db900585b69aa49e5d110 646 SMART SM00065 8 174 4.5E-16 T 22-04-2016 IPR003018 GAF domain GO:0005515 SMGD1_RS11130 1c348c002fc4a2b37119cfa8651b2b7c 465 SMART SM01027 256 381 5.3E-55 T 22-04-2016 IPR022712 Beta-Casp domain SMGD1_RS11130 1c348c002fc4a2b37119cfa8651b2b7c 465 SUPERFAMILY SSF56281 6 455 9.17E-112 T 22-04-2016 IPR001279 Metallo-beta-lactamase SMGD1_RS11130 1c348c002fc4a2b37119cfa8651b2b7c 465 Pfam PF00753 Metallo-beta-lactamase superfamily 13 74 1.7E-13 T 22-04-2016 IPR001279 Metallo-beta-lactamase SMGD1_RS11130 1c348c002fc4a2b37119cfa8651b2b7c 465 Gene3D G3DSA:3.60.15.10 3 100 1.3E-43 T 22-04-2016 IPR001279 Metallo-beta-lactamase SMGD1_RS11130 1c348c002fc4a2b37119cfa8651b2b7c 465 Gene3D G3DSA:3.60.15.10 139 264 1.3E-43 T 22-04-2016 IPR001279 Metallo-beta-lactamase SMGD1_RS11130 1c348c002fc4a2b37119cfa8651b2b7c 465 PANTHER PTHR11203 4 464 1.4E-104 T 22-04-2016 SMGD1_RS11130 1c348c002fc4a2b37119cfa8651b2b7c 465 SMART SM00849 14 240 3.7E-11 T 22-04-2016 IPR001279 Metallo-beta-lactamase SMGD1_RS11130 1c348c002fc4a2b37119cfa8651b2b7c 465 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 395 456 6.0E-11 T 22-04-2016 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain SMGD1_RS11130 1c348c002fc4a2b37119cfa8651b2b7c 465 PANTHER PTHR11203:SF11 4 464 1.4E-104 T 22-04-2016 SMGD1_RS11130 1c348c002fc4a2b37119cfa8651b2b7c 465 Pfam PF10996 Beta-Casp domain 256 381 9.6E-27 T 22-04-2016 IPR022712 Beta-Casp domain SMGD1_RS09505 ce5da0e83e01fe9eeac9f913f12ab25c 108 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 6 69 7.6E-17 T 22-04-2016 IPR002696 Putative membrane protein insertion efficiency factor SMGD1_RS09505 ce5da0e83e01fe9eeac9f913f12ab25c 108 Pfam PF01809 Haemolytic domain 3 67 4.1E-17 T 22-04-2016 IPR002696 Putative membrane protein insertion efficiency factor SMGD1_RS09505 ce5da0e83e01fe9eeac9f913f12ab25c 108 SMART SM01234 2 69 8.5E-18 T 22-04-2016 IPR002696 Putative membrane protein insertion efficiency factor SMGD1_RS09505 ce5da0e83e01fe9eeac9f913f12ab25c 108 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 24 66 4.0E-16 T 22-04-2016 IPR002696 Putative membrane protein insertion efficiency factor SMGD1_RS02720 ebf944fe094f03ba6aedd21dd06a817d 252 SUPERFAMILY SSF53223 8 109 4.14E-11 T 22-04-2016 SMGD1_RS02720 ebf944fe094f03ba6aedd21dd06a817d 252 Gene3D G3DSA:3.40.192.10 4 133 3.9E-12 T 22-04-2016 SMGD1_RS03735 dfa45bdfc6ef1c3d6494970b94acaaae 326 Pfam PF00923 Transaldolase 10 325 2.4E-79 T 22-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 SMGD1_RS03735 dfa45bdfc6ef1c3d6494970b94acaaae 326 Gene3D G3DSA:3.20.20.70 3 325 1.1E-83 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMGD1_RS03735 dfa45bdfc6ef1c3d6494970b94acaaae 326 ProSitePatterns PS01054 Transaldolase signature 1. 35 43 - T 22-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 SMGD1_RS03735 dfa45bdfc6ef1c3d6494970b94acaaae 326 PANTHER PTHR10683:SF12 2 326 2.5E-46 T 22-04-2016 SMGD1_RS03735 dfa45bdfc6ef1c3d6494970b94acaaae 326 PIRSF PIRSF036915 2 326 2.7E-69 T 22-04-2016 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 SMGD1_RS03735 dfa45bdfc6ef1c3d6494970b94acaaae 326 TIGRFAM TIGR00876 tal_mycobact: transaldolase 7 324 3.6E-77 T 22-04-2016 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 SMGD1_RS03735 dfa45bdfc6ef1c3d6494970b94acaaae 326 SUPERFAMILY SSF51569 6 326 6.11E-66 T 22-04-2016 SMGD1_RS03735 dfa45bdfc6ef1c3d6494970b94acaaae 326 PANTHER PTHR10683 2 326 2.5E-46 T 22-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 SMGD1_RS03735 dfa45bdfc6ef1c3d6494970b94acaaae 326 Hamap MF_00493 Transaldolase [tal]. 1 326 87.271 T 22-04-2016 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 SMGD1_RS06175 7ed595005b7701cd5e8710852fa23ab2 258 Gene3D G3DSA:3.40.50.150 2 191 5.7E-54 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS06175 7ed595005b7701cd5e8710852fa23ab2 258 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 6 258 46.346 T 22-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 SMGD1_RS06175 7ed595005b7701cd5e8710852fa23ab2 258 Gene3D G3DSA:1.10.8.100 195 256 2.5E-9 T 22-04-2016 IPR023165 rRNA adenine dimethylase-like SMGD1_RS06175 7ed595005b7701cd5e8710852fa23ab2 258 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 37 63 - T 22-04-2016 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 SMGD1_RS06175 7ed595005b7701cd5e8710852fa23ab2 258 SMART SM00650 22 192 8.3E-52 T 22-04-2016 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 SMGD1_RS06175 7ed595005b7701cd5e8710852fa23ab2 258 PANTHER PTHR11727 1 253 2.5E-53 T 22-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm SMGD1_RS06175 7ed595005b7701cd5e8710852fa23ab2 258 Pfam PF00398 Ribosomal RNA adenine dimethylase 8 257 5.4E-46 T 22-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm SMGD1_RS06175 7ed595005b7701cd5e8710852fa23ab2 258 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 7 256 9.1E-72 T 22-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 SMGD1_RS06175 7ed595005b7701cd5e8710852fa23ab2 258 SUPERFAMILY SSF53335 6 256 4.22E-51 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS03420 521461a44ec00859fba1a9591140d8c3 160 PANTHER PTHR15364 1 160 5.2E-44 T 22-04-2016 SMGD1_RS03420 521461a44ec00859fba1a9591140d8c3 160 SUPERFAMILY SSF52309 1 157 7.32E-40 T 22-04-2016 SMGD1_RS03420 521461a44ec00859fba1a9591140d8c3 160 Gene3D G3DSA:3.40.50.1810 1 142 1.2E-25 T 22-04-2016 IPR007710 Nucleoside 2-deoxyribosyltransferase GO:0009159|GO:0050144|GO:0070694 SMGD1_RS03420 521461a44ec00859fba1a9591140d8c3 160 Pfam PF05014 Nucleoside 2-deoxyribosyltransferase 3 141 7.9E-39 T 22-04-2016 IPR007710 Nucleoside 2-deoxyribosyltransferase GO:0009159|GO:0050144|GO:0070694 SMGD1_RS03420 521461a44ec00859fba1a9591140d8c3 160 PANTHER PTHR15364:SF1 1 160 5.2E-44 T 22-04-2016 SMGD1_RS13180 b8d184dddfc27aa2532682338203c0ac 233 Gene3D G3DSA:1.10.3130.10 4 67 1.0E-16 T 22-04-2016 SMGD1_RS13180 b8d184dddfc27aa2532682338203c0ac 233 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 128 156 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 SMGD1_RS13180 b8d184dddfc27aa2532682338203c0ac 233 PIRSF PIRSF000441 1 223 1.4E-71 T 22-04-2016 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 SMGD1_RS13180 b8d184dddfc27aa2532682338203c0ac 233 SUPERFAMILY SSF51161 8 170 4.99E-47 T 22-04-2016 IPR011004 Trimeric LpxA-like SMGD1_RS13180 b8d184dddfc27aa2532682338203c0ac 233 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 7 167 6.7E-71 T 22-04-2016 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 SMGD1_RS13180 b8d184dddfc27aa2532682338203c0ac 233 PANTHER PTHR23416 7 223 1.3E-78 T 22-04-2016 SMGD1_RS13180 b8d184dddfc27aa2532682338203c0ac 233 Gene3D G3DSA:2.160.10.10 69 172 2.8E-33 T 22-04-2016 SMGD1_RS13180 b8d184dddfc27aa2532682338203c0ac 233 PANTHER PTHR23416:SF55 7 223 1.3E-78 T 22-04-2016 SMGD1_RS13180 b8d184dddfc27aa2532682338203c0ac 233 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 74 110 5.5E-5 T 22-04-2016 IPR001451 Hexapeptide repeat SMGD1_RS13180 b8d184dddfc27aa2532682338203c0ac 233 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 119 152 2.4E-8 T 22-04-2016 IPR001451 Hexapeptide repeat SMGD1_RS06120 feb1650dab7faddc5bed5d2ed3343f5a 202 PANTHER PTHR19278 5 146 5.0E-28 T 22-04-2016 SMGD1_RS06120 feb1650dab7faddc5bed5d2ed3343f5a 202 Gene3D G3DSA:3.40.50.2020 3 200 5.1E-43 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SMGD1_RS06120 feb1650dab7faddc5bed5d2ed3343f5a 202 TIGRFAM TIGR01367 pyrE_Therm: orotate phosphoribosyltransferase 2 200 5.1E-70 T 22-04-2016 IPR006273 Orotate phosphoribosyltransferase, bacterial GO:0004588|GO:0019856 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 SMGD1_RS06120 feb1650dab7faddc5bed5d2ed3343f5a 202 SUPERFAMILY SSF53271 5 192 2.63E-37 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SMGD1_RS06120 feb1650dab7faddc5bed5d2ed3343f5a 202 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 202 24.356 T 22-04-2016 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 SMGD1_RS06120 feb1650dab7faddc5bed5d2ed3343f5a 202 Pfam PF00156 Phosphoribosyl transferase domain 38 146 1.1E-9 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 SMGD1_RS00350 57012a8487bf607ee9e1b624336dae66 259 Pfam PF12146 Serine aminopeptidase, S33 18 237 6.3E-19 T 22-04-2016 IPR022742 Serine aminopeptidase, S33 SMGD1_RS00350 57012a8487bf607ee9e1b624336dae66 259 SUPERFAMILY SSF53474 8 254 7.08E-52 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SMGD1_RS00350 57012a8487bf607ee9e1b624336dae66 259 PRINTS PR00111 Alpha/beta hydrolase fold signature 200 214 1.69E-7 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SMGD1_RS00350 57012a8487bf607ee9e1b624336dae66 259 PRINTS PR00111 Alpha/beta hydrolase fold signature 88 101 1.69E-7 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SMGD1_RS00350 57012a8487bf607ee9e1b624336dae66 259 PRINTS PR00111 Alpha/beta hydrolase fold signature 44 59 1.69E-7 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SMGD1_RS00350 57012a8487bf607ee9e1b624336dae66 259 PANTHER PTHR10992:SF771 8 256 6.4E-56 T 22-04-2016 SMGD1_RS00350 57012a8487bf607ee9e1b624336dae66 259 Gene3D G3DSA:3.40.50.1820 8 257 3.8E-54 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SMGD1_RS00350 57012a8487bf607ee9e1b624336dae66 259 PANTHER PTHR10992 8 256 6.4E-56 T 22-04-2016 SMGD1_RS13585 2a2fe2609c3b83ee05214746594d0f24 217 Pfam PF00072 Response regulator receiver domain 4 113 5.6E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS13585 2a2fe2609c3b83ee05214746594d0f24 217 PANTHER PTHR26402 2 215 1.5E-51 T 22-04-2016 SMGD1_RS13585 2a2fe2609c3b83ee05214746594d0f24 217 SMART SM00862 146 214 5.4E-10 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMGD1_RS13585 2a2fe2609c3b83ee05214746594d0f24 217 SUPERFAMILY SSF46894 145 214 2.55E-9 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SMGD1_RS13585 2a2fe2609c3b83ee05214746594d0f24 217 PANTHER PTHR26402:SF518 2 215 1.5E-51 T 22-04-2016 SMGD1_RS13585 2a2fe2609c3b83ee05214746594d0f24 217 Gene3D G3DSA:3.40.50.2300 2 125 4.3E-35 T 22-04-2016 SMGD1_RS13585 2a2fe2609c3b83ee05214746594d0f24 217 Gene3D G3DSA:1.10.10.10 126 215 9.6E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMGD1_RS13585 2a2fe2609c3b83ee05214746594d0f24 217 SMART SM00448 2 113 8.8E-34 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS13585 2a2fe2609c3b83ee05214746594d0f24 217 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 214 6.1E-10 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMGD1_RS13585 2a2fe2609c3b83ee05214746594d0f24 217 SUPERFAMILY SSF52172 3 167 5.55E-37 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS06805 8ec8c06dce3122f9acc56948424ebeb4 264 Gene3D G3DSA:3.30.465.10 62 187 1.2E-26 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 SMGD1_RS06805 8ec8c06dce3122f9acc56948424ebeb4 264 PANTHER PTHR21071 64 258 4.2E-50 T 22-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SMGD1_RS06805 8ec8c06dce3122f9acc56948424ebeb4 264 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 170 258 1.7E-24 T 22-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SMGD1_RS06805 8ec8c06dce3122f9acc56948424ebeb4 264 Gene3D G3DSA:3.90.78.10 188 260 1.6E-28 T 22-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SMGD1_RS06805 8ec8c06dce3122f9acc56948424ebeb4 264 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 8 258 3.0E-49 T 22-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SMGD1_RS06805 8ec8c06dce3122f9acc56948424ebeb4 264 SUPERFAMILY SSF56176 33 172 1.58E-16 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 SMGD1_RS06805 8ec8c06dce3122f9acc56948424ebeb4 264 SUPERFAMILY SSF56194 172 259 9.16E-29 T 22-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SMGD1_RS06805 8ec8c06dce3122f9acc56948424ebeb4 264 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 264 42.892 T 22-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SMGD1_RS06805 8ec8c06dce3122f9acc56948424ebeb4 264 PANTHER PTHR21071:SF4 64 258 4.2E-50 T 22-04-2016 SMGD1_RS06260 2aa6c0bfa9f5974b8da66eac0c67b870 435 SUPERFAMILY SSF52540 101 309 4.88E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS06260 2aa6c0bfa9f5974b8da66eac0c67b870 435 Gene3D G3DSA:1.10.1750.10 332 433 4.3E-31 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 SMGD1_RS06260 2aa6c0bfa9f5974b8da66eac0c67b870 435 PANTHER PTHR30050 1 434 2.1E-164 T 22-04-2016 SMGD1_RS06260 2aa6c0bfa9f5974b8da66eac0c67b870 435 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 1 432 30.167 T 22-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 SMGD1_RS06260 2aa6c0bfa9f5974b8da66eac0c67b870 435 SMART SM00760 341 410 1.5E-26 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 SMGD1_RS06260 2aa6c0bfa9f5974b8da66eac0c67b870 435 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 5 431 1.8E-148 T 22-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 SMGD1_RS06260 2aa6c0bfa9f5974b8da66eac0c67b870 435 Pfam PF11638 DnaA N-terminal domain 5 65 3.8E-11 T 22-04-2016 IPR024633 DnaA N-terminal domain SMGD1_RS06260 2aa6c0bfa9f5974b8da66eac0c67b870 435 SUPERFAMILY SSF48295 328 432 3.66E-30 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 SMGD1_RS06260 2aa6c0bfa9f5974b8da66eac0c67b870 435 SMART SM00382 132 258 4.1E-5 T 22-04-2016 IPR003593 AAA+ ATPase domain SMGD1_RS06260 2aa6c0bfa9f5974b8da66eac0c67b870 435 PANTHER PTHR30050:SF2 1 434 2.1E-164 T 22-04-2016 SMGD1_RS06260 2aa6c0bfa9f5974b8da66eac0c67b870 435 Gene3D G3DSA:1.10.8.60 264 331 6.5E-24 T 22-04-2016 SMGD1_RS06260 2aa6c0bfa9f5974b8da66eac0c67b870 435 Gene3D G3DSA:3.40.50.300 85 262 1.0E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS06260 2aa6c0bfa9f5974b8da66eac0c67b870 435 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 229 256 2.2E-43 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like SMGD1_RS06260 2aa6c0bfa9f5974b8da66eac0c67b870 435 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 391 410 2.2E-43 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like SMGD1_RS06260 2aa6c0bfa9f5974b8da66eac0c67b870 435 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 195 209 2.2E-43 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like SMGD1_RS06260 2aa6c0bfa9f5974b8da66eac0c67b870 435 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 163 177 2.2E-43 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like SMGD1_RS06260 2aa6c0bfa9f5974b8da66eac0c67b870 435 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 133 153 2.2E-43 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like SMGD1_RS06260 2aa6c0bfa9f5974b8da66eac0c67b870 435 Pfam PF00308 Bacterial dnaA protein 100 315 4.6E-86 T 22-04-2016 IPR013317 Chromosomal replication initiator protein DnaA SMGD1_RS06260 2aa6c0bfa9f5974b8da66eac0c67b870 435 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 343 410 8.4E-22 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 SMGD1_RS00160 f1982d4e74c2ad2704f96426af3c83eb 222 Gene3D G3DSA:3.40.50.300 1 222 3.5E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS00160 f1982d4e74c2ad2704f96426af3c83eb 222 SMART SM00382 31 220 1.9E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain SMGD1_RS00160 f1982d4e74c2ad2704f96426af3c83eb 222 Pfam PF00005 ABC transporter 22 171 3.9E-35 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMGD1_RS00160 f1982d4e74c2ad2704f96426af3c83eb 222 SUPERFAMILY SSF52540 1 221 2.66E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS00160 f1982d4e74c2ad2704f96426af3c83eb 222 PANTHER PTHR24220 3 222 8.4E-74 T 22-04-2016 SMGD1_RS07685 15e2a2e6e2e29f4e1ab999ddae5ed7bb 737 SUPERFAMILY SSF52821 27 151 5.5E-18 T 22-04-2016 IPR001763 Rhodanese-like domain SMGD1_RS07685 15e2a2e6e2e29f4e1ab999ddae5ed7bb 737 SMART SM00283 475 736 4.6E-42 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SMGD1_RS07685 15e2a2e6e2e29f4e1ab999ddae5ed7bb 737 PANTHER PTHR32089:SF1 372 737 3.2E-58 T 22-04-2016 SMGD1_RS07685 15e2a2e6e2e29f4e1ab999ddae5ed7bb 737 SUPERFAMILY SSF58104 432 737 9.59E-58 T 22-04-2016 SMGD1_RS07685 15e2a2e6e2e29f4e1ab999ddae5ed7bb 737 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 602 631 2.0E-19 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SMGD1_RS07685 15e2a2e6e2e29f4e1ab999ddae5ed7bb 737 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 573 600 2.0E-19 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SMGD1_RS07685 15e2a2e6e2e29f4e1ab999ddae5ed7bb 737 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 175 200 2.0E-19 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SMGD1_RS07685 15e2a2e6e2e29f4e1ab999ddae5ed7bb 737 Gene3D G3DSA:3.40.250.10 31 151 1.6E-17 T 22-04-2016 IPR001763 Rhodanese-like domain SMGD1_RS07685 15e2a2e6e2e29f4e1ab999ddae5ed7bb 737 Pfam PF00581 Rhodanese-like domain 40 146 9.1E-12 T 22-04-2016 IPR001763 Rhodanese-like domain SMGD1_RS07685 15e2a2e6e2e29f4e1ab999ddae5ed7bb 737 PANTHER PTHR32089 372 737 3.2E-58 T 22-04-2016 SMGD1_RS07685 15e2a2e6e2e29f4e1ab999ddae5ed7bb 737 SMART SM00450 34 150 9.0E-12 T 22-04-2016 IPR001763 Rhodanese-like domain SMGD1_RS07685 15e2a2e6e2e29f4e1ab999ddae5ed7bb 737 Gene3D G3DSA:1.10.287.950 494 707 1.4E-45 T 22-04-2016 SMGD1_RS07685 15e2a2e6e2e29f4e1ab999ddae5ed7bb 737 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 540 735 2.6E-36 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SMGD1_RS06035 64714935863d258ecff7109e736daf2d 331 Gene3D G3DSA:3.90.650.10 172 330 2.4E-51 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SMGD1_RS06035 64714935863d258ecff7109e736daf2d 331 PANTHER PTHR10520 4 321 1.8E-164 T 22-04-2016 SMGD1_RS06035 64714935863d258ecff7109e736daf2d 331 SUPERFAMILY SSF56042 172 327 1.12E-43 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SMGD1_RS06035 64714935863d258ecff7109e736daf2d 331 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 4 329 40.479 T 22-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SMGD1_RS06035 64714935863d258ecff7109e736daf2d 331 Gene3D G3DSA:3.30.1330.10 20 166 9.7E-55 T 22-04-2016 IPR016188 PurM-like, N-terminal domain SMGD1_RS06035 64714935863d258ecff7109e736daf2d 331 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 4 322 3.5E-119 T 22-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SMGD1_RS06035 64714935863d258ecff7109e736daf2d 331 SUPERFAMILY SSF55326 4 165 1.52E-45 T 22-04-2016 SMGD1_RS06035 64714935863d258ecff7109e736daf2d 331 Pfam PF00586 AIR synthase related protein, N-terminal domain 58 160 2.5E-10 T 22-04-2016 IPR016188 PurM-like, N-terminal domain SMGD1_RS06035 64714935863d258ecff7109e736daf2d 331 Pfam PF02769 AIR synthase related protein, C-terminal domain 173 330 2.9E-28 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SMGD1_RS03460 8f663fd810bf158570674c4b0b1ada2f 308 Pfam PF14572 Phosphoribosyl synthetase-associated domain 198 307 5.4E-26 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 SMGD1_RS03460 8f663fd810bf158570674c4b0b1ada2f 308 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 5 120 1.1E-49 T 22-04-2016 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 SMGD1_RS03460 8f663fd810bf158570674c4b0b1ada2f 308 Gene3D G3DSA:3.40.50.2020 1 160 5.5E-73 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SMGD1_RS03460 8f663fd810bf158570674c4b0b1ada2f 308 PANTHER PTHR10210 1 308 1.0E-168 T 22-04-2016 SMGD1_RS03460 8f663fd810bf158570674c4b0b1ada2f 308 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 4 308 6.3E-121 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 SMGD1_RS03460 8f663fd810bf158570674c4b0b1ada2f 308 SMART SM01400 4 120 1.1E-78 T 22-04-2016 SMGD1_RS03460 8f663fd810bf158570674c4b0b1ada2f 308 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 128 143 - T 22-04-2016 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: REACT_474|UniPathway: UPA00087 SMGD1_RS03460 8f663fd810bf158570674c4b0b1ada2f 308 SUPERFAMILY SSF53271 69 300 1.63E-60 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SMGD1_RS03460 8f663fd810bf158570674c4b0b1ada2f 308 Hamap MF_00583_B Ribose-phosphate pyrophosphokinase [prs]. 4 308 46.944 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 SMGD1_RS03460 8f663fd810bf158570674c4b0b1ada2f 308 Gene3D G3DSA:3.40.50.2020 161 281 8.3E-49 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SMGD1_RS00310 acb632cae21d745ebb659c2cb0a1141d 184 TIGRFAM TIGR04485 thiosulf_SoxX: sulfur oxidation c-type cytochrome SoxX 103 182 2.3E-22 T 22-04-2016 IPR030999 Sulfur oxidation c-type cytochrome SoxX SMGD1_RS00310 acb632cae21d745ebb659c2cb0a1141d 184 SUPERFAMILY SSF46626 81 182 5.85E-11 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS00310 acb632cae21d745ebb659c2cb0a1141d 184 Pfam PF00034 Cytochrome c 105 182 7.3E-5 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS00310 acb632cae21d745ebb659c2cb0a1141d 184 Gene3D G3DSA:1.10.760.10 53 67 3.3E-11 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS00310 acb632cae21d745ebb659c2cb0a1141d 184 Gene3D G3DSA:1.10.760.10 101 179 3.3E-11 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS02050 1a8ca6d4351300a8efbc84384a715725 271 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 94 264 4.5E-25 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMGD1_RS02050 1a8ca6d4351300a8efbc84384a715725 271 TIGRFAM TIGR01183 ntrB: nitrate ABC transporter, permease protein 59 256 5.6E-71 T 22-04-2016 IPR005889 Nitrate transport permease GO:0015112|GO:0015706|GO:0016021 SMGD1_RS02050 1a8ca6d4351300a8efbc84384a715725 271 Gene3D G3DSA:1.10.3720.10 67 263 2.8E-23 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMGD1_RS02050 1a8ca6d4351300a8efbc84384a715725 271 SUPERFAMILY SSF161098 70 257 4.97E-27 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMGD1_RS02050 1a8ca6d4351300a8efbc84384a715725 271 PANTHER PTHR30151:SF7 1 51 1.6E-89 T 22-04-2016 SMGD1_RS02050 1a8ca6d4351300a8efbc84384a715725 271 PANTHER PTHR30151:SF7 72 259 1.6E-89 T 22-04-2016 SMGD1_RS02050 1a8ca6d4351300a8efbc84384a715725 271 PANTHER PTHR30151 1 51 1.6E-89 T 22-04-2016 SMGD1_RS02050 1a8ca6d4351300a8efbc84384a715725 271 PANTHER PTHR30151 72 259 1.6E-89 T 22-04-2016 SMGD1_RS06520 498196a4d8f7e02da6905d56dd514e5d 427 PANTHER PTHR10799 1 47 3.4E-19 T 22-04-2016 SMGD1_RS06520 498196a4d8f7e02da6905d56dd514e5d 427 PANTHER PTHR10799 295 424 3.4E-19 T 22-04-2016 SMGD1_RS06520 498196a4d8f7e02da6905d56dd514e5d 427 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 260 425 1.7E-41 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS06520 498196a4d8f7e02da6905d56dd514e5d 427 Pfam PF13682 Chemoreceptor zinc-binding domain 156 221 4.4E-11 T 22-04-2016 IPR025991 Chemoreceptor zinc-binding domain UniPathway: UPA00599 SMGD1_RS06520 498196a4d8f7e02da6905d56dd514e5d 427 SMART SM00267 250 427 2.8E-35 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS06520 498196a4d8f7e02da6905d56dd514e5d 427 PANTHER PTHR10799:SF750 1 47 3.4E-19 T 22-04-2016 SMGD1_RS06520 498196a4d8f7e02da6905d56dd514e5d 427 PANTHER PTHR10799:SF750 295 424 3.4E-19 T 22-04-2016 SMGD1_RS06520 498196a4d8f7e02da6905d56dd514e5d 427 SUPERFAMILY SSF55073 267 425 1.33E-38 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS06520 498196a4d8f7e02da6905d56dd514e5d 427 Gene3D G3DSA:3.30.70.270 264 425 1.9E-42 T 22-04-2016 SMGD1_RS06520 498196a4d8f7e02da6905d56dd514e5d 427 Pfam PF00990 Diguanylate cyclase, GGDEF domain 264 423 1.2E-36 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS06030 454f1475ad56c36726bd92a47c3f725b 65 Pfam PF11127 Protein of unknown function (DUF2892) 11 53 3.4E-8 T 22-04-2016 IPR021309 Protein of unknown function DUF2892 SMGD1_RS00855 04c3705e202c6a6412345fc52920f47d 394 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 245 259 - T 22-04-2016 IPR019775 WD40 repeat, conserved site SMGD1_RS00855 04c3705e202c6a6412345fc52920f47d 394 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 287 301 - T 22-04-2016 IPR019775 WD40 repeat, conserved site SMGD1_RS00855 04c3705e202c6a6412345fc52920f47d 394 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 119 133 - T 22-04-2016 IPR019775 WD40 repeat, conserved site SMGD1_RS00855 04c3705e202c6a6412345fc52920f47d 394 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 161 175 - T 22-04-2016 IPR019775 WD40 repeat, conserved site SMGD1_RS00855 04c3705e202c6a6412345fc52920f47d 394 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 203 217 - T 22-04-2016 IPR019775 WD40 repeat, conserved site SMGD1_RS00855 04c3705e202c6a6412345fc52920f47d 394 SMART SM00320 93 132 3.8E-9 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS00855 04c3705e202c6a6412345fc52920f47d 394 SMART SM00320 177 216 6.1E-10 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS00855 04c3705e202c6a6412345fc52920f47d 394 SMART SM00320 135 174 1.1E-10 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS00855 04c3705e202c6a6412345fc52920f47d 394 SMART SM00320 219 258 1.3E-9 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS00855 04c3705e202c6a6412345fc52920f47d 394 SMART SM00320 345 383 18.0 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS00855 04c3705e202c6a6412345fc52920f47d 394 SMART SM00320 261 300 2.6E-6 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS00855 04c3705e202c6a6412345fc52920f47d 394 SMART SM00320 303 342 3.6E-6 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS00855 04c3705e202c6a6412345fc52920f47d 394 SUPERFAMILY SSF50978 92 379 1.1E-87 T 22-04-2016 IPR017986 WD40-repeat-containing domain GO:0005515 SMGD1_RS00855 04c3705e202c6a6412345fc52920f47d 394 Gene3D G3DSA:2.130.10.10 81 289 3.4E-70 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 SMGD1_RS00855 04c3705e202c6a6412345fc52920f47d 394 Pfam PF00400 WD domain, G-beta repeat 179 216 1.2E-8 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS00855 04c3705e202c6a6412345fc52920f47d 394 Pfam PF00400 WD domain, G-beta repeat 96 132 8.2E-7 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS00855 04c3705e202c6a6412345fc52920f47d 394 Pfam PF00400 WD domain, G-beta repeat 307 342 0.0042 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS00855 04c3705e202c6a6412345fc52920f47d 394 Pfam PF00400 WD domain, G-beta repeat 262 300 0.012 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS00855 04c3705e202c6a6412345fc52920f47d 394 Pfam PF00400 WD domain, G-beta repeat 137 174 4.2E-8 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS00855 04c3705e202c6a6412345fc52920f47d 394 Pfam PF00400 WD domain, G-beta repeat 220 258 4.4E-7 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS00855 04c3705e202c6a6412345fc52920f47d 394 PANTHER PTHR22847 63 381 3.6E-83 T 22-04-2016 SMGD1_RS00855 04c3705e202c6a6412345fc52920f47d 394 PRINTS PR00320 G protein beta WD-40 repeat signature 119 133 4.4E-9 T 22-04-2016 IPR020472 G-protein beta WD-40 repeat SMGD1_RS00855 04c3705e202c6a6412345fc52920f47d 394 PRINTS PR00320 G protein beta WD-40 repeat signature 203 217 4.4E-9 T 22-04-2016 IPR020472 G-protein beta WD-40 repeat SMGD1_RS00855 04c3705e202c6a6412345fc52920f47d 394 PRINTS PR00320 G protein beta WD-40 repeat signature 329 343 4.4E-9 T 22-04-2016 IPR020472 G-protein beta WD-40 repeat SMGD1_RS00855 04c3705e202c6a6412345fc52920f47d 394 Gene3D G3DSA:2.130.10.10 290 384 4.5E-21 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 SMGD1_RS08235 f2b8f054eaf8b54389054b90b979f966 156 Pfam PF13118 Protein of unknown function (DUF3972) 8 130 6.7E-45 T 22-04-2016 IPR025002 Domain of unknown function DUF3972 SMGD1_RS01685 9ec2aac2757f8109d4487f737c806edb 229 Pfam PF00072 Response regulator receiver domain 8 113 5.1E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS01685 9ec2aac2757f8109d4487f737c806edb 229 SUPERFAMILY SSF52172 3 137 1.85E-32 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS01685 9ec2aac2757f8109d4487f737c806edb 229 Gene3D G3DSA:1.10.10.10 134 228 3.7E-9 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMGD1_RS01685 9ec2aac2757f8109d4487f737c806edb 229 PANTHER PTHR26402 5 174 5.9E-32 T 22-04-2016 SMGD1_RS01685 9ec2aac2757f8109d4487f737c806edb 229 Gene3D G3DSA:3.40.50.2300 6 123 2.6E-32 T 22-04-2016 SMGD1_RS01685 9ec2aac2757f8109d4487f737c806edb 229 SUPERFAMILY SSF46894 133 227 7.94E-8 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SMGD1_RS01685 9ec2aac2757f8109d4487f737c806edb 229 SMART SM00448 5 116 1.7E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS01685 9ec2aac2757f8109d4487f737c806edb 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 227 3.1E-6 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMGD1_RS05965 18c99109d991620c98aefd710acd30eb 174 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 164 5.2E-51 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SMGD1_RS05965 18c99109d991620c98aefd710acd30eb 174 Hamap MF_00163 Peptide deformylase [def]. 1 166 26.741 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SMGD1_RS05965 18c99109d991620c98aefd710acd30eb 174 SUPERFAMILY SSF56420 1 168 1.83E-52 T 22-04-2016 IPR023635 Peptide deformylase SMGD1_RS05965 18c99109d991620c98aefd710acd30eb 174 Gene3D G3DSA:3.90.45.10 4 171 1.0E-55 T 22-04-2016 IPR023635 Peptide deformylase SMGD1_RS05965 18c99109d991620c98aefd710acd30eb 174 PIRSF PIRSF004749 1 174 8.8E-50 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SMGD1_RS05965 18c99109d991620c98aefd710acd30eb 174 Pfam PF01327 Polypeptide deformylase 4 153 2.1E-45 T 22-04-2016 IPR023635 Peptide deformylase SMGD1_RS05965 18c99109d991620c98aefd710acd30eb 174 PANTHER PTHR10458 5 169 7.5E-55 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SMGD1_RS05965 18c99109d991620c98aefd710acd30eb 174 PRINTS PR01576 Peptide deformylase signature 124 153 1.0E-29 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SMGD1_RS05965 18c99109d991620c98aefd710acd30eb 174 PRINTS PR01576 Peptide deformylase signature 93 104 1.0E-29 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SMGD1_RS05965 18c99109d991620c98aefd710acd30eb 174 PRINTS PR01576 Peptide deformylase signature 32 61 1.0E-29 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SMGD1_RS05965 18c99109d991620c98aefd710acd30eb 174 PRINTS PR01576 Peptide deformylase signature 105 123 1.0E-29 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SMGD1_RS12935 f815b749f2352619f857d3e2ec5a451e 283 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 128 142 8.0E-37 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SMGD1_RS12935 f815b749f2352619f857d3e2ec5a451e 283 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 250 259 8.0E-37 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SMGD1_RS12935 f815b749f2352619f857d3e2ec5a451e 283 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 162 180 8.0E-37 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SMGD1_RS12935 f815b749f2352619f857d3e2ec5a451e 283 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 228 239 8.0E-37 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SMGD1_RS12935 f815b749f2352619f857d3e2ec5a451e 283 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 199 216 8.0E-37 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SMGD1_RS12935 f815b749f2352619f857d3e2ec5a451e 283 SUPERFAMILY SSF52096 25 280 1.21E-77 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SMGD1_RS12935 f815b749f2352619f857d3e2ec5a451e 283 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 8 281 2.8E-121 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SMGD1_RS12935 f815b749f2352619f857d3e2ec5a451e 283 Pfam PF01039 Carboxyl transferase domain 69 239 4.5E-18 T 22-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SMGD1_RS12935 f815b749f2352619f857d3e2ec5a451e 283 Gene3D G3DSA:3.90.226.10 20 282 7.8E-71 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SMGD1_RS12935 f815b749f2352619f857d3e2ec5a451e 283 PANTHER PTHR22855:SF17 13 280 3.4E-132 T 22-04-2016 SMGD1_RS12935 f815b749f2352619f857d3e2ec5a451e 283 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 4 280 37.187 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SMGD1_RS12935 f815b749f2352619f857d3e2ec5a451e 283 PANTHER PTHR22855 13 280 3.4E-132 T 22-04-2016 SMGD1_RS10790 628c51a79e648dd65b354422aa6d0f1c 424 SUPERFAMILY SSF52172 9 146 4.41E-31 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS10790 628c51a79e648dd65b354422aa6d0f1c 424 Pfam PF00072 Response regulator receiver domain 10 119 5.0E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS10790 628c51a79e648dd65b354422aa6d0f1c 424 PANTHER PTHR10799:SF750 300 421 1.0E-27 T 22-04-2016 SMGD1_RS10790 628c51a79e648dd65b354422aa6d0f1c 424 PANTHER PTHR10799:SF750 1 107 1.0E-27 T 22-04-2016 SMGD1_RS10790 628c51a79e648dd65b354422aa6d0f1c 424 Gene3D G3DSA:3.40.50.2300 9 141 2.4E-31 T 22-04-2016 SMGD1_RS10790 628c51a79e648dd65b354422aa6d0f1c 424 SMART SM00448 8 119 1.4E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS10790 628c51a79e648dd65b354422aa6d0f1c 424 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 263 422 3.8E-52 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS10790 628c51a79e648dd65b354422aa6d0f1c 424 PANTHER PTHR10799 300 421 1.0E-27 T 22-04-2016 SMGD1_RS10790 628c51a79e648dd65b354422aa6d0f1c 424 PANTHER PTHR10799 1 107 1.0E-27 T 22-04-2016 SMGD1_RS10790 628c51a79e648dd65b354422aa6d0f1c 424 Pfam PF00990 Diguanylate cyclase, GGDEF domain 267 420 1.5E-47 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS10790 628c51a79e648dd65b354422aa6d0f1c 424 SMART SM00267 256 424 3.7E-62 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS10790 628c51a79e648dd65b354422aa6d0f1c 424 SUPERFAMILY SSF55073 272 422 1.33E-46 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS10790 628c51a79e648dd65b354422aa6d0f1c 424 Gene3D G3DSA:3.30.70.270 269 422 8.9E-50 T 22-04-2016 SMGD1_RS10485 7bf851e22299a3f1dbdcb1af892da989 128 SMART SM00448 3 122 2.3E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS10485 7bf851e22299a3f1dbdcb1af892da989 128 Gene3D G3DSA:3.40.50.2300 4 126 5.8E-24 T 22-04-2016 SMGD1_RS10485 7bf851e22299a3f1dbdcb1af892da989 128 Pfam PF00072 Response regulator receiver domain 5 122 4.6E-18 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS10485 7bf851e22299a3f1dbdcb1af892da989 128 SUPERFAMILY SSF52172 3 127 2.13E-24 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS10485 7bf851e22299a3f1dbdcb1af892da989 128 PANTHER PTHR26402 3 126 4.4E-23 T 22-04-2016 SMGD1_RS13270 6fbb05b62933f0a0481c885bd4f7dc28 1052 Pfam PF13109 AsmA-like C-terminal region 828 1037 3.1E-66 T 22-04-2016 SMGD1_RS02420 a0d76989b7fab02899ee5033fddcc2ed 320 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 308 5.6E-94 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS02420 a0d76989b7fab02899ee5033fddcc2ed 320 PANTHER PTHR10366:SF32 3 319 3.4E-115 T 22-04-2016 SMGD1_RS02420 a0d76989b7fab02899ee5033fddcc2ed 320 Gene3D G3DSA:3.90.25.10 186 317 2.4E-23 T 22-04-2016 SMGD1_RS02420 a0d76989b7fab02899ee5033fddcc2ed 320 Gene3D G3DSA:3.40.50.720 1 179 3.2E-41 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS02420 a0d76989b7fab02899ee5033fddcc2ed 320 PANTHER PTHR10366 3 319 3.4E-115 T 22-04-2016 SMGD1_RS02420 a0d76989b7fab02899ee5033fddcc2ed 320 SUPERFAMILY SSF51735 2 312 1.4E-66 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS02570 675cd5bbaa1d05b7c124f9ac618a34d2 304 Gene3D G3DSA:3.20.20.100 7 290 5.7E-34 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain SMGD1_RS02570 675cd5bbaa1d05b7c124f9ac618a34d2 304 PANTHER PTHR11732 11 300 3.2E-21 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta SMGD1_RS02570 675cd5bbaa1d05b7c124f9ac618a34d2 304 SUPERFAMILY SSF51430 2 293 2.49E-40 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain SMGD1_RS02570 675cd5bbaa1d05b7c124f9ac618a34d2 304 PANTHER PTHR11732:SF14 11 300 3.2E-21 T 22-04-2016 SMGD1_RS02570 675cd5bbaa1d05b7c124f9ac618a34d2 304 Pfam PF00248 Aldo/keto reductase family 14 287 5.6E-26 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain SMGD1_RS09855 2ebb57e7d81b293b38b9bd247ada0908 280 PANTHER PTHR22916 174 265 7.2E-26 T 22-04-2016 SMGD1_RS09855 2ebb57e7d81b293b38b9bd247ada0908 280 PANTHER PTHR22916 1 140 7.2E-26 T 22-04-2016 SMGD1_RS09855 2ebb57e7d81b293b38b9bd247ada0908 280 PANTHER PTHR22916:SF31 174 265 7.2E-26 T 22-04-2016 SMGD1_RS09855 2ebb57e7d81b293b38b9bd247ada0908 280 PANTHER PTHR22916:SF31 1 140 7.2E-26 T 22-04-2016 SMGD1_RS09855 2ebb57e7d81b293b38b9bd247ada0908 280 SUPERFAMILY SSF53448 1 119 1.31E-29 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMGD1_RS09855 2ebb57e7d81b293b38b9bd247ada0908 280 SUPERFAMILY SSF53448 177 275 1.31E-29 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMGD1_RS09855 2ebb57e7d81b293b38b9bd247ada0908 280 Pfam PF00535 Glycosyl transferase family 2 4 148 5.0E-12 T 22-04-2016 IPR001173 Glycosyltransferase 2-like SMGD1_RS09855 2ebb57e7d81b293b38b9bd247ada0908 280 Gene3D G3DSA:3.90.550.10 1 122 8.1E-27 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMGD1_RS09855 2ebb57e7d81b293b38b9bd247ada0908 280 Gene3D G3DSA:3.90.550.10 180 274 8.1E-27 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMGD1_RS11510 c56b5130f77711b252c5d9046c97cfa2 271 Gene3D G3DSA:3.40.50.300 24 174 3.0E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS11510 c56b5130f77711b252c5d9046c97cfa2 271 Pfam PF13401 AAA domain 44 155 1.1E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain SMGD1_RS11510 c56b5130f77711b252c5d9046c97cfa2 271 SMART SM00382 42 180 2.4E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain SMGD1_RS11510 c56b5130f77711b252c5d9046c97cfa2 271 SUPERFAMILY SSF52540 42 244 4.24E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS03880 3dc7e413d07ee5bee9e07daefe58087f 284 PANTHER PTHR21666 123 276 2.1E-37 T 22-04-2016 SMGD1_RS03880 3dc7e413d07ee5bee9e07daefe58087f 284 Gene3D G3DSA:2.70.70.10 127 277 1.4E-44 T 22-04-2016 SMGD1_RS03880 3dc7e413d07ee5bee9e07daefe58087f 284 Gene3D G3DSA:2.60.40.1590 26 122 5.5E-4 T 22-04-2016 SMGD1_RS03880 3dc7e413d07ee5bee9e07daefe58087f 284 SUPERFAMILY SSF51261 51 275 4.92E-51 T 22-04-2016 IPR011055 Duplicated hybrid motif SMGD1_RS03880 3dc7e413d07ee5bee9e07daefe58087f 284 Pfam PF01551 Peptidase family M23 178 272 5.8E-30 T 22-04-2016 IPR016047 Peptidase M23 SMGD1_RS11740 5d3d65e55790e5bac7d52606ab0d5919 246 PANTHER PTHR30176 2 136 4.4E-25 T 22-04-2016 SMGD1_RS11740 5d3d65e55790e5bac7d52606ab0d5919 246 PANTHER PTHR30176 179 234 4.4E-25 T 22-04-2016 SMGD1_RS11740 5d3d65e55790e5bac7d52606ab0d5919 246 Pfam PF00037 4Fe-4S binding domain 210 227 1.1E-5 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SMGD1_RS11740 5d3d65e55790e5bac7d52606ab0d5919 246 Gene3D G3DSA:1.10.1060.10 105 186 8.6E-4 T 22-04-2016 SMGD1_RS11740 5d3d65e55790e5bac7d52606ab0d5919 246 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 56 67 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SMGD1_RS11740 5d3d65e55790e5bac7d52606ab0d5919 246 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 213 224 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SMGD1_RS11740 5d3d65e55790e5bac7d52606ab0d5919 246 Gene3D G3DSA:3.30.70.20 55 104 4.9E-10 T 22-04-2016 SMGD1_RS11740 5d3d65e55790e5bac7d52606ab0d5919 246 Pfam PF12838 4Fe-4S dicluster domain 56 110 2.2E-9 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SMGD1_RS11740 5d3d65e55790e5bac7d52606ab0d5919 246 SUPERFAMILY SSF54862 176 226 2.51E-15 T 22-04-2016 SMGD1_RS11740 5d3d65e55790e5bac7d52606ab0d5919 246 SUPERFAMILY SSF54862 48 149 2.51E-15 T 22-04-2016 SMGD1_RS11740 5d3d65e55790e5bac7d52606ab0d5919 246 PANTHER PTHR30176:SF3 2 136 4.4E-25 T 22-04-2016 SMGD1_RS11740 5d3d65e55790e5bac7d52606ab0d5919 246 PANTHER PTHR30176:SF3 179 234 4.4E-25 T 22-04-2016 SMGD1_RS11740 5d3d65e55790e5bac7d52606ab0d5919 246 Gene3D G3DSA:3.30.70.20 187 230 2.7E-9 T 22-04-2016 SMGD1_RS08500 bac605fe874e88b973a87121617680b3 173 Gene3D G3DSA:1.10.10.60 135 163 5.4E-5 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SMGD1_RS08500 bac605fe874e88b973a87121617680b3 173 ProDom PD177368 TRANSCRIPTION DNA-BINDING MOTILITY SWRB SWARMING YLXL REGULATION BH2428 126 168 4.0E-4 T 22-04-2016 SMGD1_RS02850 8eda36af83cadd7910125efad363c4ad 693 SUPERFAMILY SSF52540 1 181 6.37E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS02850 8eda36af83cadd7910125efad363c4ad 693 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 386 687 6.4E-126 T 22-04-2016 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 SMGD1_RS02850 8eda36af83cadd7910125efad363c4ad 693 Pfam PF13500 AAA domain 4 187 1.1E-18 T 22-04-2016 SMGD1_RS02850 8eda36af83cadd7910125efad363c4ad 693 Gene3D G3DSA:3.40.50.300 2 149 3.2E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS02850 8eda36af83cadd7910125efad363c4ad 693 PANTHER PTHR23406 147 692 2.5E-53 T 22-04-2016 SMGD1_RS02850 8eda36af83cadd7910125efad363c4ad 693 Gene3D G3DSA:3.40.1390.20 204 346 3.2E-23 T 22-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like SMGD1_RS02850 8eda36af83cadd7910125efad363c4ad 693 Gene3D G3DSA:3.40.50.10750 504 663 2.1E-66 T 22-04-2016 SMGD1_RS02850 8eda36af83cadd7910125efad363c4ad 693 Pfam PF07085 DRTGG domain 212 325 6.2E-19 T 22-04-2016 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 SMGD1_RS02850 8eda36af83cadd7910125efad363c4ad 693 SUPERFAMILY SSF75138 208 329 6.28E-20 T 22-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like SMGD1_RS02850 8eda36af83cadd7910125efad363c4ad 693 Pfam PF01515 Phosphate acetyl/butaryl transferase 370 687 2.7E-129 T 22-04-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 SMGD1_RS02850 8eda36af83cadd7910125efad363c4ad 693 SUPERFAMILY SSF53659 369 690 1.32E-98 T 22-04-2016 SMGD1_RS02850 8eda36af83cadd7910125efad363c4ad 693 PANTHER PTHR23406:SF3 147 692 2.5E-53 T 22-04-2016 SMGD1_RS05560 ff04c0290ac94ded7e2063f9e1e02665 466 SMART SM00471 288 425 3.5E-8 T 22-04-2016 IPR003607 HD/PDEase domain SMGD1_RS05560 ff04c0290ac94ded7e2063f9e1e02665 466 Pfam PF01966 HD domain 295 415 2.3E-20 T 22-04-2016 IPR006674 HD domain SMGD1_RS05560 ff04c0290ac94ded7e2063f9e1e02665 466 Gene3D G3DSA:1.10.3210.10 290 458 9.0E-25 T 22-04-2016 IPR006674 HD domain SMGD1_RS05560 ff04c0290ac94ded7e2063f9e1e02665 466 SUPERFAMILY SSF109604 285 453 3.62E-39 T 22-04-2016 SMGD1_RS05560 ff04c0290ac94ded7e2063f9e1e02665 466 TIGRFAM TIGR00277 HDIG: HDIG domain 290 384 1.6E-7 T 22-04-2016 IPR006675 HDIG domain SMGD1_RS06670 372a34bf53cfdd4d7792f80e366ccbca 315 Pfam PF12706 Beta-lactamase superfamily domain 32 140 5.8E-10 T 22-04-2016 IPR001279 Metallo-beta-lactamase SMGD1_RS06670 372a34bf53cfdd4d7792f80e366ccbca 315 Hamap MF_01818 Ribonuclease BN [rbn]. 1 307 31.609 T 22-04-2016 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 SMGD1_RS06670 372a34bf53cfdd4d7792f80e366ccbca 315 SUPERFAMILY SSF56281 1 308 8.45E-71 T 22-04-2016 IPR001279 Metallo-beta-lactamase SMGD1_RS06670 372a34bf53cfdd4d7792f80e366ccbca 315 PANTHER PTHR12553 1 150 1.1E-61 T 22-04-2016 SMGD1_RS06670 372a34bf53cfdd4d7792f80e366ccbca 315 PANTHER PTHR12553 180 313 1.1E-61 T 22-04-2016 SMGD1_RS06670 372a34bf53cfdd4d7792f80e366ccbca 315 SMART SM00849 20 209 4.4E-6 T 22-04-2016 IPR001279 Metallo-beta-lactamase SMGD1_RS06670 372a34bf53cfdd4d7792f80e366ccbca 315 Gene3D G3DSA:3.60.15.10 3 308 4.4E-70 T 22-04-2016 IPR001279 Metallo-beta-lactamase SMGD1_RS05290 bd9ab940bb253918aef88012102f03c7 275 PRINTS PR00207 Flagellin signature 76 95 4.2E-20 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 SMGD1_RS05290 bd9ab940bb253918aef88012102f03c7 275 PRINTS PR00207 Flagellin signature 111 134 4.2E-20 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 SMGD1_RS05290 bd9ab940bb253918aef88012102f03c7 275 PRINTS PR00207 Flagellin signature 37 54 4.2E-20 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 SMGD1_RS05290 bd9ab940bb253918aef88012102f03c7 275 SUPERFAMILY SSF64518 1 275 4.45E-77 T 22-04-2016 SMGD1_RS05290 bd9ab940bb253918aef88012102f03c7 275 PANTHER PTHR30244:SF1 3 275 4.7E-85 T 22-04-2016 SMGD1_RS05290 bd9ab940bb253918aef88012102f03c7 275 PANTHER PTHR30244 3 275 4.7E-85 T 22-04-2016 SMGD1_RS05290 bd9ab940bb253918aef88012102f03c7 275 Gene3D G3DSA:1.20.1330.10 55 231 8.6E-50 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SMGD1_RS05290 bd9ab940bb253918aef88012102f03c7 275 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 2.6E-38 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SMGD1_RS05290 bd9ab940bb253918aef88012102f03c7 275 Pfam PF00700 Bacterial flagellin C-terminal helical region 190 274 2.1E-26 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SMGD1_RS01615 1583b1a38b338a18f4b202be9005d456 223 PANTHER PTHR10953 7 153 8.1E-33 T 22-04-2016 SMGD1_RS01615 1583b1a38b338a18f4b202be9005d456 223 SUPERFAMILY SSF69572 3 217 1.96E-52 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 SMGD1_RS01615 1583b1a38b338a18f4b202be9005d456 223 Gene3D G3DSA:3.40.50.720 6 207 7.6E-42 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS01615 1583b1a38b338a18f4b202be9005d456 223 Pfam PF00899 ThiF family 6 193 8.0E-37 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 SMGD1_RS06550 2309d1fc32d6555fe9b016660b107834 212 PANTHER PTHR39327:SF1 54 182 1.0E-44 T 22-04-2016 SMGD1_RS06550 2309d1fc32d6555fe9b016660b107834 212 Pfam PF06035 Bacterial transglutaminase-like cysteine proteinase BTLCP 58 165 2.6E-13 T 22-04-2016 IPR010319 Transglutaminase-like cysteine peptidase, predicted SMGD1_RS06550 2309d1fc32d6555fe9b016660b107834 212 PANTHER PTHR39327 54 182 1.0E-44 T 22-04-2016 SMGD1_RS06550 2309d1fc32d6555fe9b016660b107834 212 SUPERFAMILY SSF54001 45 120 3.09E-5 T 22-04-2016 SMGD1_RS07870 de0cbce29cf90c162fbf93a171dcaae5 364 Pfam PF00155 Aminotransferase class I and II 25 359 5.9E-41 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SMGD1_RS07870 de0cbce29cf90c162fbf93a171dcaae5 364 PANTHER PTHR13693 4 363 2.8E-89 T 22-04-2016 SMGD1_RS07870 de0cbce29cf90c162fbf93a171dcaae5 364 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 221 230 - T 22-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 SMGD1_RS07870 de0cbce29cf90c162fbf93a171dcaae5 364 Gene3D G3DSA:3.90.1150.10 258 359 4.3E-10 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SMGD1_RS07870 de0cbce29cf90c162fbf93a171dcaae5 364 PANTHER PTHR13693:SF53 4 363 2.8E-89 T 22-04-2016 SMGD1_RS07870 de0cbce29cf90c162fbf93a171dcaae5 364 Gene3D G3DSA:3.40.640.10 58 257 7.8E-63 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SMGD1_RS07870 de0cbce29cf90c162fbf93a171dcaae5 364 SUPERFAMILY SSF53383 5 361 6.12E-69 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SMGD1_RS03305 0e42f1fef59a1987f9463d0e730643c1 400 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 2 399 25.816 T 22-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SMGD1_RS03305 0e42f1fef59a1987f9463d0e730643c1 400 PANTHER PTHR23135 57 399 4.1E-62 T 22-04-2016 SMGD1_RS03305 0e42f1fef59a1987f9463d0e730643c1 400 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 3 397 1.0E-97 T 22-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SMGD1_RS03305 0e42f1fef59a1987f9463d0e730643c1 400 Pfam PF02875 Mur ligase family, glutamate ligase domain 261 328 6.2E-6 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SMGD1_RS03305 0e42f1fef59a1987f9463d0e730643c1 400 SUPERFAMILY SSF53244 261 399 3.94E-33 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SMGD1_RS03305 0e42f1fef59a1987f9463d0e730643c1 400 Gene3D G3DSA:3.90.190.20 261 396 8.0E-41 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SMGD1_RS03305 0e42f1fef59a1987f9463d0e730643c1 400 PANTHER PTHR23135:SF2 57 399 4.1E-62 T 22-04-2016 SMGD1_RS03305 0e42f1fef59a1987f9463d0e730643c1 400 Gene3D G3DSA:3.40.1190.10 87 214 2.6E-32 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SMGD1_RS03305 0e42f1fef59a1987f9463d0e730643c1 400 SUPERFAMILY SSF53623 86 218 1.13E-28 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SMGD1_RS03305 0e42f1fef59a1987f9463d0e730643c1 400 Pfam PF08245 Mur ligase middle domain 92 213 1.6E-18 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SMGD1_RS00600 674617ae279f5370bf4989a959dde5bc 741 Pfam PF00384 Molybdopterin oxidoreductase 2 360 4.1E-49 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 SMGD1_RS00600 674617ae279f5370bf4989a959dde5bc 741 Pfam PF01568 Molydopterin dinucleotide binding domain 608 733 1.5E-19 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 SMGD1_RS00600 674617ae279f5370bf4989a959dde5bc 741 PANTHER PTHR11615 520 738 2.7E-142 T 22-04-2016 SMGD1_RS00600 674617ae279f5370bf4989a959dde5bc 741 PANTHER PTHR11615 193 393 2.7E-142 T 22-04-2016 SMGD1_RS00600 674617ae279f5370bf4989a959dde5bc 741 PANTHER PTHR11615 1 173 2.7E-142 T 22-04-2016 SMGD1_RS00600 674617ae279f5370bf4989a959dde5bc 741 SUPERFAMILY SSF50692 542 571 2.49E-32 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain SMGD1_RS00600 674617ae279f5370bf4989a959dde5bc 741 SUPERFAMILY SSF50692 603 739 2.49E-32 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain SMGD1_RS00600 674617ae279f5370bf4989a959dde5bc 741 Gene3D G3DSA:2.40.40.20 434 464 3.6E-44 T 22-04-2016 SMGD1_RS00600 674617ae279f5370bf4989a959dde5bc 741 Gene3D G3DSA:2.40.40.20 557 568 3.6E-44 T 22-04-2016 SMGD1_RS00600 674617ae279f5370bf4989a959dde5bc 741 Gene3D G3DSA:2.40.40.20 602 739 3.6E-44 T 22-04-2016 SMGD1_RS00600 674617ae279f5370bf4989a959dde5bc 741 PANTHER PTHR11615:SF140 520 738 2.7E-142 T 22-04-2016 SMGD1_RS00600 674617ae279f5370bf4989a959dde5bc 741 PANTHER PTHR11615:SF140 193 393 2.7E-142 T 22-04-2016 SMGD1_RS00600 674617ae279f5370bf4989a959dde5bc 741 PANTHER PTHR11615:SF140 1 173 2.7E-142 T 22-04-2016 SMGD1_RS00600 674617ae279f5370bf4989a959dde5bc 741 Gene3D G3DSA:3.40.50.740 234 371 7.0E-44 T 22-04-2016 SMGD1_RS00600 674617ae279f5370bf4989a959dde5bc 741 SUPERFAMILY SSF53706 1 400 7.2E-131 T 22-04-2016 SMGD1_RS00600 674617ae279f5370bf4989a959dde5bc 741 Gene3D G3DSA:3.40.228.10 1 201 8.1E-70 T 22-04-2016 SMGD1_RS08750 c28b32442695122fb78aabbc15643903 198 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 158 192 2.6E-10 T 22-04-2016 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 SMGD1_RS08750 c28b32442695122fb78aabbc15643903 198 PANTHER PTHR10681 3 198 9.9E-87 T 22-04-2016 SMGD1_RS08750 c28b32442695122fb78aabbc15643903 198 PANTHER PTHR10681:SF114 3 198 9.9E-87 T 22-04-2016 SMGD1_RS08750 c28b32442695122fb78aabbc15643903 198 Gene3D G3DSA:3.30.1020.10 160 195 4.3E-14 T 22-04-2016 SMGD1_RS08750 c28b32442695122fb78aabbc15643903 198 PIRSF PIRSF000239 1 197 9.1E-59 T 22-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 SMGD1_RS08750 c28b32442695122fb78aabbc15643903 198 SUPERFAMILY SSF52833 2 195 6.73E-64 T 22-04-2016 IPR012336 Thioredoxin-like fold SMGD1_RS08750 c28b32442695122fb78aabbc15643903 198 Gene3D G3DSA:3.40.30.10 3 159 8.6E-61 T 22-04-2016 IPR012336 Thioredoxin-like fold SMGD1_RS08750 c28b32442695122fb78aabbc15643903 198 Pfam PF00578 AhpC/TSA family 4 137 1.9E-32 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 SMGD1_RS07270 fb90c776454bbc8f01ce1d2b030db812 297 SUPERFAMILY SSF55073 143 296 6.28E-43 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS07270 fb90c776454bbc8f01ce1d2b030db812 297 PANTHER PTHR10799:SF750 1 98 4.0E-21 T 22-04-2016 SMGD1_RS07270 fb90c776454bbc8f01ce1d2b030db812 297 PANTHER PTHR10799:SF750 171 296 4.0E-21 T 22-04-2016 SMGD1_RS07270 fb90c776454bbc8f01ce1d2b030db812 297 Gene3D G3DSA:3.30.70.270 140 296 1.8E-47 T 22-04-2016 SMGD1_RS07270 fb90c776454bbc8f01ce1d2b030db812 297 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 140 295 3.8E-47 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS07270 fb90c776454bbc8f01ce1d2b030db812 297 Pfam PF00990 Diguanylate cyclase, GGDEF domain 139 293 2.1E-41 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS07270 fb90c776454bbc8f01ce1d2b030db812 297 SMART SM00267 126 297 5.9E-42 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS07270 fb90c776454bbc8f01ce1d2b030db812 297 PANTHER PTHR10799 1 98 4.0E-21 T 22-04-2016 SMGD1_RS07270 fb90c776454bbc8f01ce1d2b030db812 297 PANTHER PTHR10799 171 296 4.0E-21 T 22-04-2016 SMGD1_RS13450 d81dc5ce2387fc9e7c817bf7dab2937a 454 Gene3D G3DSA:3.20.20.240 3 400 5.6E-146 T 22-04-2016 IPR014348 Cobalamin (vitamin B12)-dependent enzyme, catalytic subdomain GO:0008152|GO:0016866|GO:0031419 SMGD1_RS13450 d81dc5ce2387fc9e7c817bf7dab2937a 454 PIRSF PIRSF001495 2 449 1.4E-115 T 22-04-2016 IPR006396 Glutamate mutase epsilon subunit GO:0019670|GO:0050097 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728|UniPathway: UPA00561 SMGD1_RS13450 d81dc5ce2387fc9e7c817bf7dab2937a 454 Pfam PF06368 Methylaspartate mutase E chain (MutE) 42 432 8.2E-115 T 22-04-2016 IPR006396 Glutamate mutase epsilon subunit GO:0019670|GO:0050097 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728|UniPathway: UPA00561 SMGD1_RS13450 d81dc5ce2387fc9e7c817bf7dab2937a 454 SUPERFAMILY SSF51703 3 453 1.07E-156 T 22-04-2016 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0008152|GO:0031419 SMGD1_RS01115 b044430da9fef30bf96b0114b913adc5 180 SMART SM00448 19 129 5.1E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS01115 b044430da9fef30bf96b0114b913adc5 180 Pfam PF00072 Response regulator receiver domain 22 126 4.8E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS01115 b044430da9fef30bf96b0114b913adc5 180 PANTHER PTHR26402 19 124 5.4E-27 T 22-04-2016 SMGD1_RS01115 b044430da9fef30bf96b0114b913adc5 180 Gene3D G3DSA:3.40.50.2300 20 133 1.9E-28 T 22-04-2016 SMGD1_RS01115 b044430da9fef30bf96b0114b913adc5 180 SUPERFAMILY SSF52172 18 134 3.56E-30 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS05945 a4f9c4b9cb83f902656e1b949c4a4a1b 104 Pfam PF01527 Transposase 8 82 4.3E-12 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SMGD1_RS05945 a4f9c4b9cb83f902656e1b949c4a4a1b 104 Gene3D G3DSA:1.10.10.60 13 98 3.2E-23 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SMGD1_RS05945 a4f9c4b9cb83f902656e1b949c4a4a1b 104 SUPERFAMILY SSF46689 7 102 1.79E-21 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SMGD1_RS05945 a4f9c4b9cb83f902656e1b949c4a4a1b 104 PANTHER PTHR33215 6 102 2.8E-18 T 22-04-2016 SMGD1_RS01755 a4f9c4b9cb83f902656e1b949c4a4a1b 104 Pfam PF01527 Transposase 8 82 4.3E-12 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SMGD1_RS01755 a4f9c4b9cb83f902656e1b949c4a4a1b 104 Gene3D G3DSA:1.10.10.60 13 98 3.2E-23 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SMGD1_RS01755 a4f9c4b9cb83f902656e1b949c4a4a1b 104 SUPERFAMILY SSF46689 7 102 1.79E-21 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SMGD1_RS01755 a4f9c4b9cb83f902656e1b949c4a4a1b 104 PANTHER PTHR33215 6 102 2.8E-18 T 22-04-2016 SMGD1_RS03205 b194577c6a48b5c5285026f5231b880e 88 SMART SM01323 2 84 4.8E-35 T 22-04-2016 IPR003849 Preprotein translocase YajC SMGD1_RS03205 b194577c6a48b5c5285026f5231b880e 88 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 3 83 2.6E-28 T 22-04-2016 IPR003849 Preprotein translocase YajC SMGD1_RS03205 b194577c6a48b5c5285026f5231b880e 88 Pfam PF02699 Preprotein translocase subunit 6 82 8.4E-26 T 22-04-2016 IPR003849 Preprotein translocase YajC SMGD1_RS03205 b194577c6a48b5c5285026f5231b880e 88 PANTHER PTHR33909 1 82 2.6E-19 T 22-04-2016 SMGD1_RS03205 b194577c6a48b5c5285026f5231b880e 88 PANTHER PTHR33909:SF1 1 82 2.6E-19 T 22-04-2016 SMGD1_RS03205 b194577c6a48b5c5285026f5231b880e 88 PRINTS PR01853 Bacterial YajC preprotein translocase signature 4 24 3.2E-13 T 22-04-2016 IPR003849 Preprotein translocase YajC SMGD1_RS03205 b194577c6a48b5c5285026f5231b880e 88 PRINTS PR01853 Bacterial YajC preprotein translocase signature 24 42 3.2E-13 T 22-04-2016 IPR003849 Preprotein translocase YajC SMGD1_RS08225 600439ff285fe20819525580ba57799f 430 ProSitePatterns PS01276 Peptidase family U32 signature. 163 181 - T 22-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SMGD1_RS08225 600439ff285fe20819525580ba57799f 430 PANTHER PTHR30217 1 308 2.0E-118 T 22-04-2016 SMGD1_RS08225 600439ff285fe20819525580ba57799f 430 Pfam PF01136 Peptidase family U32 79 308 5.7E-78 T 22-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SMGD1_RS08225 600439ff285fe20819525580ba57799f 430 PANTHER PTHR30217:SF6 1 308 2.0E-118 T 22-04-2016 SMGD1_RS08885 939dd2cb365ba85965550695e389072f 292 Gene3D G3DSA:3.40.50.2300 2 130 1.6E-37 T 22-04-2016 SMGD1_RS08885 939dd2cb365ba85965550695e389072f 292 Gene3D G3DSA:3.30.70.270 137 291 1.2E-51 T 22-04-2016 SMGD1_RS08885 939dd2cb365ba85965550695e389072f 292 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 134 291 8.9E-50 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS08885 939dd2cb365ba85965550695e389072f 292 SUPERFAMILY SSF52172 5 135 1.05E-34 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS08885 939dd2cb365ba85965550695e389072f 292 PANTHER PTHR26402 5 130 9.2E-50 T 22-04-2016 SMGD1_RS08885 939dd2cb365ba85965550695e389072f 292 SMART SM00448 5 118 1.8E-33 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS08885 939dd2cb365ba85965550695e389072f 292 SMART SM00267 124 292 1.0E-59 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS08885 939dd2cb365ba85965550695e389072f 292 SUPERFAMILY SSF55073 140 291 7.69E-47 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS08885 939dd2cb365ba85965550695e389072f 292 PANTHER PTHR26402:SF495 5 130 9.2E-50 T 22-04-2016 SMGD1_RS08885 939dd2cb365ba85965550695e389072f 292 Pfam PF00990 Diguanylate cyclase, GGDEF domain 135 287 5.9E-45 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS08885 939dd2cb365ba85965550695e389072f 292 Pfam PF00072 Response regulator receiver domain 7 118 3.2E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS13360 94b582c6b34696b7ae03524bda4fce03 181 SUPERFAMILY SSF52172 14 172 1.28E-31 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS13360 94b582c6b34696b7ae03524bda4fce03 181 PANTHER PTHR26402 16 131 5.2E-28 T 22-04-2016 SMGD1_RS13360 94b582c6b34696b7ae03524bda4fce03 181 Gene3D G3DSA:3.40.50.2300 12 136 3.1E-31 T 22-04-2016 SMGD1_RS13360 94b582c6b34696b7ae03524bda4fce03 181 Pfam PF00072 Response regulator receiver domain 19 127 1.3E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS13360 94b582c6b34696b7ae03524bda4fce03 181 SMART SM00448 16 127 6.4E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS10705 d4d0dcc46084d578fcf898df52d62941 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 22-04-2016 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 SMGD1_RS10705 d4d0dcc46084d578fcf898df52d62941 112 PRINTS PR00340 P-II protein signature 23 41 3.4E-43 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SMGD1_RS10705 d4d0dcc46084d578fcf898df52d62941 112 PRINTS PR00340 P-II protein signature 83 103 3.4E-43 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SMGD1_RS10705 d4d0dcc46084d578fcf898df52d62941 112 PRINTS PR00340 P-II protein signature 2 17 3.4E-43 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SMGD1_RS10705 d4d0dcc46084d578fcf898df52d62941 112 PRINTS PR00340 P-II protein signature 52 75 3.4E-43 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SMGD1_RS10705 d4d0dcc46084d578fcf898df52d62941 112 SUPERFAMILY SSF54913 1 112 7.63E-46 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta SMGD1_RS10705 d4d0dcc46084d578fcf898df52d62941 112 SMART SM00938 4 105 1.3E-66 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SMGD1_RS10705 d4d0dcc46084d578fcf898df52d62941 112 PIRSF PIRSF039144 1 112 3.3E-55 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SMGD1_RS10705 d4d0dcc46084d578fcf898df52d62941 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 4.9E-43 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SMGD1_RS10705 d4d0dcc46084d578fcf898df52d62941 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 22-04-2016 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 SMGD1_RS10705 d4d0dcc46084d578fcf898df52d62941 112 PANTHER PTHR30115 1 112 9.4E-65 T 22-04-2016 SMGD1_RS10705 d4d0dcc46084d578fcf898df52d62941 112 Gene3D G3DSA:3.30.70.120 1 112 1.4E-49 T 22-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal SMGD1_RS14060 a4a13e033a2b8989159cd9a30882f3ae 368 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 19 367 1.2E-138 T 22-04-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 SMGD1_RS14060 a4a13e033a2b8989159cd9a30882f3ae 368 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 301 330 - T 22-04-2016 IPR030390 RNA methyltransferase TrmA, active site SMGD1_RS14060 a4a13e033a2b8989159cd9a30882f3ae 368 PANTHER PTHR11061 19 368 2.7E-131 T 22-04-2016 SMGD1_RS14060 a4a13e033a2b8989159cd9a30882f3ae 368 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 350 360 - T 22-04-2016 IPR030391 RNA methyltransferase TrmA, conserved site SMGD1_RS14060 a4a13e033a2b8989159cd9a30882f3ae 368 Gene3D G3DSA:3.40.50.150 157 365 3.0E-46 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS14060 a4a13e033a2b8989159cd9a30882f3ae 368 SUPERFAMILY SSF53335 2 367 5.24E-55 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS14060 a4a13e033a2b8989159cd9a30882f3ae 368 PANTHER PTHR11061:SF25 19 368 2.7E-131 T 22-04-2016 SMGD1_RS14060 a4a13e033a2b8989159cd9a30882f3ae 368 Hamap MF_01011 tRNA/tmRNA (uracil-C(5))-methyltransferase [trmA]. 12 368 40.306 T 22-04-2016 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 SMGD1_RS14060 a4a13e033a2b8989159cd9a30882f3ae 368 TIGRFAM TIGR02143 trmA_only: tRNA (uracil(54)-C(5))-methyltransferase 19 368 2.6E-139 T 22-04-2016 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 SMGD1_RS00020 522c45981986d6fed4fc152e53c37450 213 Gene3D G3DSA:3.40.50.1000 88 212 1.3E-39 T 22-04-2016 IPR023214 HAD-like domain SMGD1_RS00020 522c45981986d6fed4fc152e53c37450 213 Gene3D G3DSA:3.40.50.1000 3 24 1.3E-39 T 22-04-2016 IPR023214 HAD-like domain SMGD1_RS00020 522c45981986d6fed4fc152e53c37450 213 PANTHER PTHR18901:SF14 3 212 9.0E-38 T 22-04-2016 SMGD1_RS00020 522c45981986d6fed4fc152e53c37450 213 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 186 1.3E-36 T 22-04-2016 IPR023214 HAD-like domain SMGD1_RS00020 522c45981986d6fed4fc152e53c37450 213 SUPERFAMILY SSF56784 4 212 1.97E-49 T 22-04-2016 IPR023214 HAD-like domain SMGD1_RS00020 522c45981986d6fed4fc152e53c37450 213 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 91 182 3.2E-12 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SMGD1_RS00020 522c45981986d6fed4fc152e53c37450 213 PANTHER PTHR18901 3 212 9.0E-38 T 22-04-2016 SMGD1_RS10110 261aab345e76d55cb0f7dafc7463b74b 306 Pfam PF03150 Di-haem cytochrome c peroxidase 32 177 1.4E-48 T 22-04-2016 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 SMGD1_RS10110 261aab345e76d55cb0f7dafc7463b74b 306 Gene3D G3DSA:1.10.760.10 169 301 2.7E-40 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS10110 261aab345e76d55cb0f7dafc7463b74b 306 Gene3D G3DSA:1.10.760.10 27 168 2.6E-49 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS10110 261aab345e76d55cb0f7dafc7463b74b 306 SUPERFAMILY SSF46626 167 300 7.59E-39 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS10110 261aab345e76d55cb0f7dafc7463b74b 306 PIRSF PIRSF000294 19 305 4.4E-98 T 22-04-2016 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 SMGD1_RS10110 261aab345e76d55cb0f7dafc7463b74b 306 PANTHER PTHR30600 8 300 1.1E-107 T 22-04-2016 SMGD1_RS10110 261aab345e76d55cb0f7dafc7463b74b 306 SUPERFAMILY SSF46626 26 165 1.41E-45 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS10110 261aab345e76d55cb0f7dafc7463b74b 306 PANTHER PTHR30600:SF7 8 300 1.1E-107 T 22-04-2016 SMGD1_RS10110 261aab345e76d55cb0f7dafc7463b74b 306 Pfam PF00034 Cytochrome c 186 299 4.2E-9 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS02715 c1c2f123a5236005d4001bc4dee88dd7 168 Gene3D G3DSA:1.10.238.10 2 154 1.2E-4 T 22-04-2016 IPR011992 EF-hand domain pair SMGD1_RS13400 2dddfc5dc153c95817c8e9af5193c760 167 PANTHER PTHR40072:SF2 6 132 4.8E-21 T 22-04-2016 SMGD1_RS13400 2dddfc5dc153c95817c8e9af5193c760 167 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 7 120 6.9E-25 T 22-04-2016 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 SMGD1_RS13400 2dddfc5dc153c95817c8e9af5193c760 167 PANTHER PTHR40072 6 132 4.8E-21 T 22-04-2016 SMGD1_RS13400 2dddfc5dc153c95817c8e9af5193c760 167 SUPERFAMILY SSF52540 7 122 1.6E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS13400 2dddfc5dc153c95817c8e9af5193c760 167 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 8 162 7.3E-35 T 22-04-2016 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 SMGD1_RS13400 2dddfc5dc153c95817c8e9af5193c760 167 Gene3D G3DSA:3.40.50.300 6 165 2.3E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS03255 4b8b5a1fd157ba81bf19d17652e82855 213 PANTHER PTHR11749 1 211 6.1E-99 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 SMGD1_RS03255 4b8b5a1fd157ba81bf19d17652e82855 213 SUPERFAMILY SSF51366 2 211 8.75E-64 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 SMGD1_RS03255 4b8b5a1fd157ba81bf19d17652e82855 213 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 3 212 3.2E-85 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 SMGD1_RS03255 4b8b5a1fd157ba81bf19d17652e82855 213 Pfam PF00834 Ribulose-phosphate 3 epimerase family 3 199 1.3E-79 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 SMGD1_RS03255 4b8b5a1fd157ba81bf19d17652e82855 213 PANTHER PTHR11749:SF3 1 211 6.1E-99 T 22-04-2016 SMGD1_RS03255 4b8b5a1fd157ba81bf19d17652e82855 213 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 30 44 - T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 SMGD1_RS03255 4b8b5a1fd157ba81bf19d17652e82855 213 Gene3D G3DSA:3.20.20.70 2 212 1.1E-82 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMGD1_RS03255 4b8b5a1fd157ba81bf19d17652e82855 213 PIRSF PIRSF001461 1 213 5.8E-88 T 22-04-2016 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 SMGD1_RS02910 4d006c8da50c56fad64cb31ccc79cd6d 270 SUPERFAMILY SSF54862 52 215 1.09E-22 T 22-04-2016 SMGD1_RS02910 4d006c8da50c56fad64cb31ccc79cd6d 270 Gene3D G3DSA:3.30.70.20 65 116 1.3E-9 T 22-04-2016 SMGD1_RS02910 4d006c8da50c56fad64cb31ccc79cd6d 270 Pfam PF12838 4Fe-4S dicluster domain 66 121 4.6E-9 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SMGD1_RS02910 4d006c8da50c56fad64cb31ccc79cd6d 270 Pfam PF12838 4Fe-4S dicluster domain 156 209 1.8E-7 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SMGD1_RS02910 4d006c8da50c56fad64cb31ccc79cd6d 270 PANTHER PTHR30176 7 245 3.1E-65 T 22-04-2016 SMGD1_RS02910 4d006c8da50c56fad64cb31ccc79cd6d 270 Gene3D G3DSA:3.30.70.20 117 154 1.7E-6 T 22-04-2016 SMGD1_RS02910 4d006c8da50c56fad64cb31ccc79cd6d 270 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 67 78 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SMGD1_RS02910 4d006c8da50c56fad64cb31ccc79cd6d 270 PANTHER PTHR30176:SF3 7 245 3.1E-65 T 22-04-2016 SMGD1_RS02910 4d006c8da50c56fad64cb31ccc79cd6d 270 TIGRFAM TIGR00397 mauM_napG: MauM/NapG family ferredoxin-type protein 16 228 5.8E-68 T 22-04-2016 IPR004494 MauM/NapG ferredoxin-type protein SMGD1_RS02910 4d006c8da50c56fad64cb31ccc79cd6d 270 Gene3D G3DSA:3.30.70.20 155 210 1.0E-10 T 22-04-2016 SMGD1_RS05410 4b3679201fda3514de209fb84f507655 147 PIRSF PIRSF006019 1 146 1.9E-50 T 22-04-2016 IPR016473 Deoxycytidylate deaminase GO:0004132|GO:0006220|GO:0008270 KEGG: 00240+3.5.4.12|MetaCyc: PWY-7210 SMGD1_RS05410 4b3679201fda3514de209fb84f507655 147 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 3 118 2.0E-30 T 22-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 SMGD1_RS05410 4b3679201fda3514de209fb84f507655 147 SUPERFAMILY SSF53927 2 142 4.18E-42 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 SMGD1_RS05410 4b3679201fda3514de209fb84f507655 147 Gene3D G3DSA:3.40.140.10 4 143 3.6E-42 T 22-04-2016 SMGD1_RS05410 4b3679201fda3514de209fb84f507655 147 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 72 107 - T 22-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 SMGD1_RS05410 4b3679201fda3514de209fb84f507655 147 PANTHER PTHR11086 4 147 5.6E-43 T 22-04-2016 IPR015517 Deoxycytidylate deaminase-related SMGD1_RS13655 a7d54c7d342329825d1186b18bebaed9 156 PIRSF PIRSF029256 1 154 5.9E-58 T 22-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 SMGD1_RS13655 a7d54c7d342329825d1186b18bebaed9 156 PANTHER PTHR12029 1 147 1.9E-59 T 22-04-2016 SMGD1_RS13655 a7d54c7d342329825d1186b18bebaed9 156 Pfam PF00588 SpoU rRNA Methylase family 3 142 2.0E-36 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 SMGD1_RS13655 a7d54c7d342329825d1186b18bebaed9 156 PANTHER PTHR12029:SF31 1 147 1.9E-59 T 22-04-2016 SMGD1_RS13655 a7d54c7d342329825d1186b18bebaed9 156 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 151 31.105 T 22-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 SMGD1_RS13655 a7d54c7d342329825d1186b18bebaed9 156 SUPERFAMILY SSF75217 2 149 1.64E-38 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases SMGD1_RS13655 a7d54c7d342329825d1186b18bebaed9 156 Gene3D G3DSA:3.40.1280.10 2 149 6.4E-56 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SMGD1_RS04135 9838f6f37d3bcdb23b9564bf399eee8e 97 SUPERFAMILY SSF46626 1 86 1.63E-7 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS04135 9838f6f37d3bcdb23b9564bf399eee8e 97 Gene3D G3DSA:1.10.760.10 4 85 1.8E-5 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS01060 c3d20add4cc9003d03eeb37d989f5107 192 Gene3D G3DSA:1.10.10.10 131 190 5.5E-7 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMGD1_RS01060 c3d20add4cc9003d03eeb37d989f5107 192 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 189 9.8E-6 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMGD1_RS01060 c3d20add4cc9003d03eeb37d989f5107 192 Gene3D G3DSA:3.40.50.2300 4 123 1.6E-4 T 22-04-2016 SMGD1_RS01060 c3d20add4cc9003d03eeb37d989f5107 192 SUPERFAMILY SSF52172 1 119 9.67E-7 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS01060 c3d20add4cc9003d03eeb37d989f5107 192 SUPERFAMILY SSF46894 124 189 1.16E-8 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SMGD1_RS08375 78e3331d4c097bbce2ab2bc899e158ea 282 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 177 184 - T 22-04-2016 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 SMGD1_RS08375 78e3331d4c097bbce2ab2bc899e158ea 282 Pfam PF01261 Xylose isomerase-like TIM barrel 21 241 7.3E-43 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain SMGD1_RS08375 78e3331d4c097bbce2ab2bc899e158ea 282 ProSitePatterns PS00731 AP endonucleases family 2 signature 3. 217 233 - T 22-04-2016 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 SMGD1_RS08375 78e3331d4c097bbce2ab2bc899e158ea 282 TIGRFAM TIGR00587 nfo: apurinic endonuclease (APN1) 5 278 4.1E-110 T 22-04-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 SMGD1_RS08375 78e3331d4c097bbce2ab2bc899e158ea 282 SMART SM00518 5 281 1.3E-125 T 22-04-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 SMGD1_RS08375 78e3331d4c097bbce2ab2bc899e158ea 282 ProSitePatterns PS00729 AP endonucleases family 2 signature 1. 71 79 - T 22-04-2016 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 SMGD1_RS08375 78e3331d4c097bbce2ab2bc899e158ea 282 Hamap MF_00152 Probable endonuclease 4 [nfo]. 4 281 42.504 T 22-04-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 SMGD1_RS08375 78e3331d4c097bbce2ab2bc899e158ea 282 Gene3D G3DSA:3.20.20.150 4 280 1.5E-120 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain SMGD1_RS08375 78e3331d4c097bbce2ab2bc899e158ea 282 SUPERFAMILY SSF51658 5 280 1.27E-101 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain SMGD1_RS08375 78e3331d4c097bbce2ab2bc899e158ea 282 PANTHER PTHR21445:SF0 2 282 1.0E-159 T 22-04-2016 SMGD1_RS08375 78e3331d4c097bbce2ab2bc899e158ea 282 PANTHER PTHR21445 2 282 1.0E-159 T 22-04-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 SMGD1_RS01330 4812c0bb3db7a72453994f372ccfae61 86 Pfam PF01381 Helix-turn-helix 22 79 3.9E-5 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SMGD1_RS01330 4812c0bb3db7a72453994f372ccfae61 86 SUPERFAMILY SSF47413 11 82 1.3E-9 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SMGD1_RS01330 4812c0bb3db7a72453994f372ccfae61 86 Gene3D G3DSA:1.10.260.40 10 84 4.6E-12 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SMGD1_RS01330 4812c0bb3db7a72453994f372ccfae61 86 SMART SM00530 21 79 0.0097 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SMGD1_RS09750 8b1c9b2e62c0b3484d303724593be574 161 PIRSF PIRSF001220 1 156 3.5E-19 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 SMGD1_RS09750 8b1c9b2e62c0b3484d303724593be574 161 SUPERFAMILY SSF53774 1 155 7.85E-33 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 SMGD1_RS09750 8b1c9b2e62c0b3484d303724593be574 161 Pfam PF00710 Asparaginase, N-terminal 1 152 3.6E-25 T 22-04-2016 IPR027474 L-asparaginase, N-terminal SMGD1_RS09750 8b1c9b2e62c0b3484d303724593be574 161 PIRSF PIRSF500176 1 156 3.8E-20 T 22-04-2016 SMGD1_RS09750 8b1c9b2e62c0b3484d303724593be574 161 PRINTS PR00139 Asparaginase/glutaminase family signature 1 9 5.0E-7 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 SMGD1_RS09750 8b1c9b2e62c0b3484d303724593be574 161 PRINTS PR00139 Asparaginase/glutaminase family signature 72 90 5.0E-7 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 SMGD1_RS09750 8b1c9b2e62c0b3484d303724593be574 161 Gene3D G3DSA:3.40.50.1170 1 153 3.4E-28 T 22-04-2016 IPR027474 L-asparaginase, N-terminal SMGD1_RS13235 026561a9e9e54feeddeb59fb6405033b 734 SMART SM00843 673 734 4.2E-25 T 22-04-2016 IPR018541 FtsK gamma domain SMGD1_RS13235 026561a9e9e54feeddeb59fb6405033b 734 SMART SM00382 417 593 0.0031 T 22-04-2016 IPR003593 AAA+ ATPase domain SMGD1_RS13235 026561a9e9e54feeddeb59fb6405033b 734 PANTHER PTHR22683 212 734 1.8E-213 T 22-04-2016 SMGD1_RS13235 026561a9e9e54feeddeb59fb6405033b 734 Pfam PF01580 FtsK/SpoIIIE family 522 572 5.8E-15 T 22-04-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 SMGD1_RS13235 026561a9e9e54feeddeb59fb6405033b 734 Pfam PF01580 FtsK/SpoIIIE family 382 519 1.1E-48 T 22-04-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 SMGD1_RS13235 026561a9e9e54feeddeb59fb6405033b 734 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 27 138 3.2E-5 T 22-04-2016 IPR025199 DNA translocase FtsK, 4TM region SMGD1_RS13235 026561a9e9e54feeddeb59fb6405033b 734 Gene3D G3DSA:3.40.50.300 355 637 2.3E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS13235 026561a9e9e54feeddeb59fb6405033b 734 Pfam PF09397 Ftsk gamma domain 675 734 1.9E-22 T 22-04-2016 IPR018541 FtsK gamma domain SMGD1_RS13235 026561a9e9e54feeddeb59fb6405033b 734 PANTHER PTHR22683:SF41 212 734 1.8E-213 T 22-04-2016 SMGD1_RS13235 026561a9e9e54feeddeb59fb6405033b 734 SUPERFAMILY SSF52540 356 644 3.04E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS13235 026561a9e9e54feeddeb59fb6405033b 734 SUPERFAMILY SSF46785 674 734 1.07E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMGD1_RS06640 c9d508842ab65c261f54efe245ba1043 795 Gene3D G3DSA:3.30.1490.20 1 193 2.1E-64 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SMGD1_RS06640 c9d508842ab65c261f54efe245ba1043 795 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 4 790 0.0 T 22-04-2016 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|UniPathway: UPA00138 SMGD1_RS06640 c9d508842ab65c261f54efe245ba1043 795 Gene3D G3DSA:3.30.470.20 195 344 6.8E-54 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SMGD1_RS06640 c9d508842ab65c261f54efe245ba1043 795 Pfam PF00391 PEP-utilising enzyme, mobile domain 385 455 3.3E-23 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 SMGD1_RS06640 c9d508842ab65c261f54efe245ba1043 795 SUPERFAMILY SSF51621 461 792 1.94E-97 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SMGD1_RS06640 c9d508842ab65c261f54efe245ba1043 795 PANTHER PTHR22931 1 795 0.0 T 22-04-2016 SMGD1_RS06640 c9d508842ab65c261f54efe245ba1043 795 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 695 710 6.4E-5 T 22-04-2016 SMGD1_RS06640 c9d508842ab65c261f54efe245ba1043 795 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 712 727 6.4E-5 T 22-04-2016 SMGD1_RS06640 c9d508842ab65c261f54efe245ba1043 795 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 748 760 6.4E-5 T 22-04-2016 SMGD1_RS06640 c9d508842ab65c261f54efe245ba1043 795 SUPERFAMILY SSF52009 349 464 2.22E-29 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 SMGD1_RS06640 c9d508842ab65c261f54efe245ba1043 795 PIRSF PIRSF000854 1 795 0.0 T 22-04-2016 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|UniPathway: UPA00138 SMGD1_RS06640 c9d508842ab65c261f54efe245ba1043 795 Gene3D G3DSA:3.50.30.10 374 472 1.0E-31 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 SMGD1_RS06640 c9d508842ab65c261f54efe245ba1043 795 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 16 347 1.7E-117 T 22-04-2016 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 SMGD1_RS06640 c9d508842ab65c261f54efe245ba1043 795 SUPERFAMILY SSF56059 1 384 1.13E-98 T 22-04-2016 SMGD1_RS06640 c9d508842ab65c261f54efe245ba1043 795 PANTHER PTHR22931:SF7 1 795 0.0 T 22-04-2016 SMGD1_RS06640 c9d508842ab65c261f54efe245ba1043 795 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 477 789 2.2E-66 T 22-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 SMGD1_RS06640 c9d508842ab65c261f54efe245ba1043 795 Gene3D G3DSA:3.20.20.60 480 790 9.7E-105 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SMGD1_RS02810 e3a845dc5043d6ca85adb397808a69f9 291 Gene3D G3DSA:1.10.10.60 9 63 6.2E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SMGD1_RS02810 e3a845dc5043d6ca85adb397808a69f9 291 Pfam PF12833 Helix-turn-helix domain 34 112 1.0E-17 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SMGD1_RS02810 e3a845dc5043d6ca85adb397808a69f9 291 Gene3D G3DSA:1.10.10.60 64 113 6.3E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SMGD1_RS02810 e3a845dc5043d6ca85adb397808a69f9 291 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 64 107 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 SMGD1_RS02810 e3a845dc5043d6ca85adb397808a69f9 291 PANTHER PTHR11019:SF11 6 119 2.2E-20 T 22-04-2016 SMGD1_RS02810 e3a845dc5043d6ca85adb397808a69f9 291 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 80 95 3.5E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SMGD1_RS02810 e3a845dc5043d6ca85adb397808a69f9 291 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 95 111 3.5E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SMGD1_RS02810 e3a845dc5043d6ca85adb397808a69f9 291 Gene3D G3DSA:3.20.80.10 142 290 1.1E-29 T 22-04-2016 IPR011256 Regulatory factor, effector binding domain SMGD1_RS02810 e3a845dc5043d6ca85adb397808a69f9 291 PANTHER PTHR11019 6 119 2.2E-20 T 22-04-2016 SMGD1_RS02810 e3a845dc5043d6ca85adb397808a69f9 291 Pfam PF06445 GyrI-like small molecule binding domain 142 289 3.0E-19 T 22-04-2016 IPR029442 GyrI-like small molecule binding domain SMGD1_RS02810 e3a845dc5043d6ca85adb397808a69f9 291 SUPERFAMILY SSF46689 64 115 2.2E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SMGD1_RS02810 e3a845dc5043d6ca85adb397808a69f9 291 SMART SM00871 139 290 1.0E-12 T 22-04-2016 IPR010499 Bacterial transcription activator, effector binding SMGD1_RS02810 e3a845dc5043d6ca85adb397808a69f9 291 SMART SM00342 27 111 7.5E-22 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SMGD1_RS02810 e3a845dc5043d6ca85adb397808a69f9 291 SUPERFAMILY SSF55136 142 283 2.22E-22 T 22-04-2016 IPR011256 Regulatory factor, effector binding domain SMGD1_RS13760 33e8d0ea6f6f1eb50bdff82a90d6c557 497 PANTHER PTHR34596 138 397 1.5E-13 T 22-04-2016 SMGD1_RS13760 33e8d0ea6f6f1eb50bdff82a90d6c557 497 Pfam PF03573 outer membrane porin, OprD family 137 459 1.5E-16 T 22-04-2016 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 SMGD1_RS13760 33e8d0ea6f6f1eb50bdff82a90d6c557 497 Gene3D G3DSA:2.40.160.10 67 497 3.1E-46 T 22-04-2016 IPR023614 Porin domain SMGD1_RS02995 d90e693d7c9a61b8e34b81de95c83abd 331 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 1 325 37.231 T 22-04-2016 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SMGD1_RS02995 d90e693d7c9a61b8e34b81de95c83abd 331 Gene3D G3DSA:3.30.360.10 153 299 3.5E-44 T 22-04-2016 SMGD1_RS02995 d90e693d7c9a61b8e34b81de95c83abd 331 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 155 301 8.1E-14 T 22-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SMGD1_RS02995 d90e693d7c9a61b8e34b81de95c83abd 331 SUPERFAMILY SSF55347 146 299 1.42E-40 T 22-04-2016 SMGD1_RS02995 d90e693d7c9a61b8e34b81de95c83abd 331 PANTHER PTHR32338:SF8 1 331 5.1E-133 T 22-04-2016 SMGD1_RS02995 d90e693d7c9a61b8e34b81de95c83abd 331 Gene3D G3DSA:3.40.50.720 1 152 1.7E-54 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS02995 d90e693d7c9a61b8e34b81de95c83abd 331 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 1 331 1.6E-110 T 22-04-2016 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SMGD1_RS02995 d90e693d7c9a61b8e34b81de95c83abd 331 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 141 157 - T 22-04-2016 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SMGD1_RS02995 d90e693d7c9a61b8e34b81de95c83abd 331 PANTHER PTHR32338 1 331 5.1E-133 T 22-04-2016 SMGD1_RS02995 d90e693d7c9a61b8e34b81de95c83abd 331 SMART SM00859 2 138 7.8E-47 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 SMGD1_RS02995 d90e693d7c9a61b8e34b81de95c83abd 331 SUPERFAMILY SSF51735 1 166 8.7E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS02995 d90e693d7c9a61b8e34b81de95c83abd 331 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 2 137 8.8E-32 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 SMGD1_RS06810 a4893630ff6e68b3308b332bbdf3b7c8 88 PANTHER PTHR34040 1 88 3.6E-32 T 22-04-2016 SMGD1_RS06810 a4893630ff6e68b3308b332bbdf3b7c8 88 PANTHER PTHR34040:SF2 1 88 3.6E-32 T 22-04-2016 SMGD1_RS06810 a4893630ff6e68b3308b332bbdf3b7c8 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 53 75 8.3E-21 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 SMGD1_RS06810 a4893630ff6e68b3308b332bbdf3b7c8 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 17 38 8.3E-21 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 SMGD1_RS06810 a4893630ff6e68b3308b332bbdf3b7c8 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 38 53 8.3E-21 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 SMGD1_RS06810 a4893630ff6e68b3308b332bbdf3b7c8 88 PIRSF PIRSF004669 1 88 3.7E-30 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 SMGD1_RS06810 a4893630ff6e68b3308b332bbdf3b7c8 88 Pfam PF01313 Bacterial export proteins, family 3 5 76 6.0E-28 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 SMGD1_RS06810 a4893630ff6e68b3308b332bbdf3b7c8 88 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 3 87 8.8E-30 T 22-04-2016 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 SMGD1_RS07525 8206966611cf34b7629544fc05e5bca6 282 Pfam PF13393 Histidyl-tRNA synthetase 18 141 7.8E-17 T 22-04-2016 SMGD1_RS07525 8206966611cf34b7629544fc05e5bca6 282 SUPERFAMILY SSF55681 5 279 2.71E-25 T 22-04-2016 SMGD1_RS07525 8206966611cf34b7629544fc05e5bca6 282 Gene3D G3DSA:3.30.930.10 3 280 3.4E-26 T 22-04-2016 SMGD1_RS08010 e5710760021d971c58ac0314afa0a283 387 PANTHER PTHR24423 6 381 3.5E-52 T 22-04-2016 SMGD1_RS08010 e5710760021d971c58ac0314afa0a283 387 SUPERFAMILY SSF55874 233 381 5.5E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS08010 e5710760021d971c58ac0314afa0a283 387 Gene3D G3DSA:1.10.287.130 160 227 5.6E-4 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS08010 e5710760021d971c58ac0314afa0a283 387 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 19 137 5.0E-13 T 22-04-2016 IPR000014 PAS domain SMGD1_RS08010 e5710760021d971c58ac0314afa0a283 387 SMART SM00091 20 86 7.2E-5 T 22-04-2016 IPR000014 PAS domain SMGD1_RS08010 e5710760021d971c58ac0314afa0a283 387 SUPERFAMILY SSF47384 158 231 6.47E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS08010 e5710760021d971c58ac0314afa0a283 387 Gene3D G3DSA:3.30.450.20 15 128 9.2E-18 T 22-04-2016 SMGD1_RS08010 e5710760021d971c58ac0314afa0a283 387 SUPERFAMILY SSF55785 6 128 2.62E-18 T 22-04-2016 IPR000014 PAS domain SMGD1_RS08010 e5710760021d971c58ac0314afa0a283 387 SMART SM00387 275 385 2.4E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS08010 e5710760021d971c58ac0314afa0a283 387 PRINTS PR00344 Bacterial sensor protein C-terminal signature 369 382 5.2E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS08010 e5710760021d971c58ac0314afa0a283 387 PRINTS PR00344 Bacterial sensor protein C-terminal signature 334 344 5.2E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS08010 e5710760021d971c58ac0314afa0a283 387 PRINTS PR00344 Bacterial sensor protein C-terminal signature 345 363 5.2E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS08010 e5710760021d971c58ac0314afa0a283 387 PRINTS PR00344 Bacterial sensor protein C-terminal signature 316 330 5.2E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS08010 e5710760021d971c58ac0314afa0a283 387 Pfam PF13426 PAS domain 31 129 6.8E-9 T 22-04-2016 IPR000014 PAS domain SMGD1_RS08010 e5710760021d971c58ac0314afa0a283 387 Gene3D G3DSA:3.30.565.10 234 381 1.6E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS08010 e5710760021d971c58ac0314afa0a283 387 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 278 382 5.9E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS08215 433bc30e43c0f83f0cee8133a74088fb 259 Gene3D G3DSA:3.20.20.140 1 258 2.3E-45 T 22-04-2016 SMGD1_RS08215 433bc30e43c0f83f0cee8133a74088fb 259 Pfam PF02811 PHP domain 4 187 1.9E-12 T 22-04-2016 IPR004013 PHP domain GO:0003824 SMGD1_RS08215 433bc30e43c0f83f0cee8133a74088fb 259 PANTHER PTHR21039 2 257 1.8E-55 T 22-04-2016 IPR010140 Histidinol phosphate phosphatase, HisJ GO:0000105|GO:0004401 KEGG: 00340+3.1.3.15|UniPathway: UPA00031 SMGD1_RS08215 433bc30e43c0f83f0cee8133a74088fb 259 SUPERFAMILY SSF89550 1 259 1.16E-50 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 SMGD1_RS08215 433bc30e43c0f83f0cee8133a74088fb 259 TIGRFAM TIGR01856 hisJ_fam: histidinol phosphate phosphatase, HisJ family 4 231 3.5E-50 T 22-04-2016 IPR010140 Histidinol phosphate phosphatase, HisJ GO:0000105|GO:0004401 KEGG: 00340+3.1.3.15|UniPathway: UPA00031 SMGD1_RS08820 37db83b55e76314797460147283065ff 619 SUPERFAMILY SSF55874 471 619 1.44E-27 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS08820 37db83b55e76314797460147283065ff 619 Gene3D G3DSA:3.30.565.10 473 619 1.4E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS08820 37db83b55e76314797460147283065ff 619 SMART SM00387 511 619 7.6E-15 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS08820 37db83b55e76314797460147283065ff 619 Gene3D G3DSA:3.30.450.20 72 210 9.7E-20 T 22-04-2016 SMGD1_RS08820 37db83b55e76314797460147283065ff 619 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 515 617 1.6E-15 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS08820 37db83b55e76314797460147283065ff 619 SMART SM01049 74 167 3.9E-8 T 22-04-2016 IPR033480 Single Cache domain 2 SMGD1_RS08820 37db83b55e76314797460147283065ff 619 PANTHER PTHR24423 117 180 2.4E-30 T 22-04-2016 SMGD1_RS08820 37db83b55e76314797460147283065ff 619 PANTHER PTHR24423 298 336 2.4E-30 T 22-04-2016 SMGD1_RS08820 37db83b55e76314797460147283065ff 619 PANTHER PTHR24423 42 56 2.4E-30 T 22-04-2016 SMGD1_RS08820 37db83b55e76314797460147283065ff 619 PANTHER PTHR24423 360 376 2.4E-30 T 22-04-2016 SMGD1_RS08820 37db83b55e76314797460147283065ff 619 PANTHER PTHR24423 397 617 2.4E-30 T 22-04-2016 SMGD1_RS08820 37db83b55e76314797460147283065ff 619 PANTHER PTHR24423:SF445 117 180 2.4E-30 T 22-04-2016 SMGD1_RS08820 37db83b55e76314797460147283065ff 619 PANTHER PTHR24423:SF445 298 336 2.4E-30 T 22-04-2016 SMGD1_RS08820 37db83b55e76314797460147283065ff 619 PANTHER PTHR24423:SF445 42 56 2.4E-30 T 22-04-2016 SMGD1_RS08820 37db83b55e76314797460147283065ff 619 PANTHER PTHR24423:SF445 360 376 2.4E-30 T 22-04-2016 SMGD1_RS08820 37db83b55e76314797460147283065ff 619 PANTHER PTHR24423:SF445 397 617 2.4E-30 T 22-04-2016 SMGD1_RS08820 37db83b55e76314797460147283065ff 619 SUPERFAMILY SSF47384 396 470 5.69E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS08820 37db83b55e76314797460147283065ff 619 Pfam PF08269 Cache domain 35 304 1.4E-48 T 22-04-2016 IPR004010 Double Cache domain 2 SMGD1_RS08820 37db83b55e76314797460147283065ff 619 PRINTS PR00344 Bacterial sensor protein C-terminal signature 552 566 4.5E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS08820 37db83b55e76314797460147283065ff 619 PRINTS PR00344 Bacterial sensor protein C-terminal signature 607 619 4.5E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS08820 37db83b55e76314797460147283065ff 619 PRINTS PR00344 Bacterial sensor protein C-terminal signature 583 601 4.5E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS08820 37db83b55e76314797460147283065ff 619 PRINTS PR00344 Bacterial sensor protein C-terminal signature 570 580 4.5E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS01130 18cce459119e53c4e1bdd1897134a577 610 SUPERFAMILY SSF55073 481 602 5.49E-35 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS01130 18cce459119e53c4e1bdd1897134a577 610 Pfam PF08447 PAS fold 370 458 2.1E-22 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 SMGD1_RS01130 18cce459119e53c4e1bdd1897134a577 610 SUPERFAMILY SSF55785 353 467 4.01E-22 T 22-04-2016 IPR000014 PAS domain SMGD1_RS01130 18cce459119e53c4e1bdd1897134a577 610 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 473 601 3.0E-42 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS01130 18cce459119e53c4e1bdd1897134a577 610 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 345 470 7.6E-12 T 22-04-2016 IPR000014 PAS domain SMGD1_RS01130 18cce459119e53c4e1bdd1897134a577 610 SMART SM00267 465 609 1.5E-35 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS01130 18cce459119e53c4e1bdd1897134a577 610 Gene3D G3DSA:3.30.450.20 338 473 2.1E-37 T 22-04-2016 SMGD1_RS01130 18cce459119e53c4e1bdd1897134a577 610 SMART SM01079 71 263 1.7E-68 T 22-04-2016 IPR006189 CHASE domain SMGD1_RS01130 18cce459119e53c4e1bdd1897134a577 610 SMART SM00091 347 415 5.2E-5 T 22-04-2016 IPR000014 PAS domain SMGD1_RS01130 18cce459119e53c4e1bdd1897134a577 610 SMART SM00086 422 465 1.0E-8 T 22-04-2016 IPR001610 PAC motif SMGD1_RS01130 18cce459119e53c4e1bdd1897134a577 610 Gene3D G3DSA:3.30.70.270 478 601 2.3E-36 T 22-04-2016 SMGD1_RS01130 18cce459119e53c4e1bdd1897134a577 610 Pfam PF03924 CHASE domain 74 261 2.3E-57 T 22-04-2016 IPR006189 CHASE domain SMGD1_RS01130 18cce459119e53c4e1bdd1897134a577 610 Pfam PF00990 Diguanylate cyclase, GGDEF domain 477 601 1.8E-37 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS08880 fe66a40c0d6dc7acbbe7d40db235c268 733 SUPERFAMILY SSF52172 471 591 1.38E-27 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS08880 fe66a40c0d6dc7acbbe7d40db235c268 733 SUPERFAMILY SSF55874 283 454 1.57E-42 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS08880 fe66a40c0d6dc7acbbe7d40db235c268 733 Gene3D G3DSA:1.10.287.130 223 280 1.6E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS08880 fe66a40c0d6dc7acbbe7d40db235c268 733 SMART SM00448 473 586 4.1E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS08880 fe66a40c0d6dc7acbbe7d40db235c268 733 SMART SM00448 611 729 3.0E-32 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS08880 fe66a40c0d6dc7acbbe7d40db235c268 733 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 342 454 6.4E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS08880 fe66a40c0d6dc7acbbe7d40db235c268 733 SMART SM00387 341 457 1.0E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS08880 fe66a40c0d6dc7acbbe7d40db235c268 733 SUPERFAMILY SSF52172 612 733 2.7E-36 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS08880 fe66a40c0d6dc7acbbe7d40db235c268 733 PANTHER PTHR24423:SF382 596 733 9.6E-135 T 22-04-2016 SMGD1_RS08880 fe66a40c0d6dc7acbbe7d40db235c268 733 PANTHER PTHR24423:SF382 208 460 9.6E-135 T 22-04-2016 SMGD1_RS08880 fe66a40c0d6dc7acbbe7d40db235c268 733 PANTHER PTHR24423:SF382 1 8 9.6E-135 T 22-04-2016 SMGD1_RS08880 fe66a40c0d6dc7acbbe7d40db235c268 733 Pfam PF00512 His Kinase A (phospho-acceptor) domain 232 294 3.2E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS08880 fe66a40c0d6dc7acbbe7d40db235c268 733 Pfam PF00072 Response regulator receiver domain 475 586 2.0E-19 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS08880 fe66a40c0d6dc7acbbe7d40db235c268 733 Pfam PF00072 Response regulator receiver domain 613 728 1.4E-21 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS08880 fe66a40c0d6dc7acbbe7d40db235c268 733 Gene3D G3DSA:3.40.50.2300 612 733 1.8E-40 T 22-04-2016 SMGD1_RS08880 fe66a40c0d6dc7acbbe7d40db235c268 733 Gene3D G3DSA:3.40.50.2300 470 591 1.2E-26 T 22-04-2016 SMGD1_RS08880 fe66a40c0d6dc7acbbe7d40db235c268 733 PANTHER PTHR24423 596 733 9.6E-135 T 22-04-2016 SMGD1_RS08880 fe66a40c0d6dc7acbbe7d40db235c268 733 PANTHER PTHR24423 208 460 9.6E-135 T 22-04-2016 SMGD1_RS08880 fe66a40c0d6dc7acbbe7d40db235c268 733 PANTHER PTHR24423 1 8 9.6E-135 T 22-04-2016 SMGD1_RS08880 fe66a40c0d6dc7acbbe7d40db235c268 733 Gene3D G3DSA:3.30.565.10 281 456 9.2E-43 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS08880 fe66a40c0d6dc7acbbe7d40db235c268 733 SMART SM00388 229 294 2.8E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS08880 fe66a40c0d6dc7acbbe7d40db235c268 733 PRINTS PR00344 Bacterial sensor protein C-terminal signature 441 454 9.1E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS08880 fe66a40c0d6dc7acbbe7d40db235c268 733 PRINTS PR00344 Bacterial sensor protein C-terminal signature 382 396 9.1E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS08880 fe66a40c0d6dc7acbbe7d40db235c268 733 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 410 9.1E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS08880 fe66a40c0d6dc7acbbe7d40db235c268 733 PRINTS PR00344 Bacterial sensor protein C-terminal signature 417 435 9.1E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS08880 fe66a40c0d6dc7acbbe7d40db235c268 733 SUPERFAMILY SSF47384 212 296 7.46E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS06195 f52d90229e42c4befe0c0160f95f5d76 359 PIRSF PIRSF006004 2 359 1.3E-127 T 22-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SMGD1_RS06195 f52d90229e42c4befe0c0160f95f5d76 359 SMART SM00729 113 331 0.0035 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 SMGD1_RS06195 f52d90229e42c4befe0c0160f95f5d76 359 PANTHER PTHR30544 1 355 2.3E-142 T 22-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SMGD1_RS06195 f52d90229e42c4befe0c0160f95f5d76 359 PANTHER PTHR30544:SF5 1 355 2.3E-142 T 22-04-2016 SMGD1_RS06195 f52d90229e42c4befe0c0160f95f5d76 359 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 5 356 66.445 T 22-04-2016 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SMGD1_RS06195 f52d90229e42c4befe0c0160f95f5d76 359 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 3 355 1.7E-132 T 22-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SMGD1_RS06195 f52d90229e42c4befe0c0160f95f5d76 359 Pfam PF04055 Radical SAM superfamily 117 280 5.0E-16 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SMGD1_RS06195 f52d90229e42c4befe0c0160f95f5d76 359 SUPERFAMILY SSF102114 112 321 3.27E-13 T 22-04-2016 SMGD1_RS06195 f52d90229e42c4befe0c0160f95f5d76 359 Gene3D G3DSA:3.20.20.70 115 331 2.3E-16 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMGD1_RS00730 db95e3c2a649a8402ede7df17500af47 459 Gene3D G3DSA:1.10.40.30 375 433 4.7E-22 T 22-04-2016 SMGD1_RS00730 db95e3c2a649a8402ede7df17500af47 459 Gene3D G3DSA:1.20.200.10 108 374 5.6E-93 T 22-04-2016 SMGD1_RS00730 db95e3c2a649a8402ede7df17500af47 459 Hamap MF_00006 Argininosuccinate lyase [argH]. 3 455 40.507 T 22-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SMGD1_RS00730 db95e3c2a649a8402ede7df17500af47 459 SUPERFAMILY SSF48557 7 458 1.19E-131 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 SMGD1_RS00730 db95e3c2a649a8402ede7df17500af47 459 PRINTS PR00145 Argininosuccinate lyase family signature 143 163 7.4E-60 T 22-04-2016 SMGD1_RS00730 db95e3c2a649a8402ede7df17500af47 459 PRINTS PR00145 Argininosuccinate lyase family signature 276 292 7.4E-60 T 22-04-2016 SMGD1_RS00730 db95e3c2a649a8402ede7df17500af47 459 PRINTS PR00145 Argininosuccinate lyase family signature 194 210 7.4E-60 T 22-04-2016 SMGD1_RS00730 db95e3c2a649a8402ede7df17500af47 459 PRINTS PR00145 Argininosuccinate lyase family signature 232 256 7.4E-60 T 22-04-2016 SMGD1_RS00730 db95e3c2a649a8402ede7df17500af47 459 PRINTS PR00145 Argininosuccinate lyase family signature 102 124 7.4E-60 T 22-04-2016 SMGD1_RS00730 db95e3c2a649a8402ede7df17500af47 459 PRINTS PR00145 Argininosuccinate lyase family signature 311 330 7.4E-60 T 22-04-2016 SMGD1_RS00730 db95e3c2a649a8402ede7df17500af47 459 Gene3D G3DSA:1.10.275.10 3 107 8.9E-40 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal SMGD1_RS00730 db95e3c2a649a8402ede7df17500af47 459 Pfam PF14698 Argininosuccinate lyase C-terminal 366 432 2.9E-17 T 22-04-2016 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SMGD1_RS00730 db95e3c2a649a8402ede7df17500af47 459 PANTHER PTHR11444 1 457 9.3E-213 T 22-04-2016 IPR000362 Fumarate lyase family SMGD1_RS00730 db95e3c2a649a8402ede7df17500af47 459 TIGRFAM TIGR00838 argH: argininosuccinate lyase 4 457 1.0E-174 T 22-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SMGD1_RS00730 db95e3c2a649a8402ede7df17500af47 459 Pfam PF00206 Lyase 7 301 6.0E-71 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal SMGD1_RS00730 db95e3c2a649a8402ede7df17500af47 459 PANTHER PTHR11444:SF3 1 457 9.3E-213 T 22-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SMGD1_RS00730 db95e3c2a649a8402ede7df17500af47 459 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 2.9E-24 T 22-04-2016 IPR000362 Fumarate lyase family SMGD1_RS00730 db95e3c2a649a8402ede7df17500af47 459 PRINTS PR00149 Fumarate lyase superfamily signature 276 292 2.9E-24 T 22-04-2016 IPR000362 Fumarate lyase family SMGD1_RS00730 db95e3c2a649a8402ede7df17500af47 459 PRINTS PR00149 Fumarate lyase superfamily signature 103 121 2.9E-24 T 22-04-2016 IPR000362 Fumarate lyase family SMGD1_RS00730 db95e3c2a649a8402ede7df17500af47 459 PRINTS PR00149 Fumarate lyase superfamily signature 232 259 2.9E-24 T 22-04-2016 IPR000362 Fumarate lyase family SMGD1_RS00730 db95e3c2a649a8402ede7df17500af47 459 ProSitePatterns PS00163 Fumarate lyases signature. 276 285 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 SMGD1_RS13195 355d62925ebb3c97d4d7bfaa24ca7c0a 403 PIRSF PIRSF001549 1 403 3.1E-114 T 22-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 SMGD1_RS13195 355d62925ebb3c97d4d7bfaa24ca7c0a 403 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 3 399 1.8E-140 T 22-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 SMGD1_RS13195 355d62925ebb3c97d4d7bfaa24ca7c0a 403 SUPERFAMILY SSF55681 1 313 5.97E-97 T 22-04-2016 SMGD1_RS13195 355d62925ebb3c97d4d7bfaa24ca7c0a 403 PANTHER PTHR11476 1 403 7.6E-165 T 22-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 SMGD1_RS13195 355d62925ebb3c97d4d7bfaa24ca7c0a 403 SUPERFAMILY SSF52954 322 403 1.64E-14 T 22-04-2016 IPR004154 Anticodon-binding SMGD1_RS13195 355d62925ebb3c97d4d7bfaa24ca7c0a 403 Pfam PF03129 Anticodon binding domain 330 402 8.0E-8 T 22-04-2016 IPR004154 Anticodon-binding SMGD1_RS13195 355d62925ebb3c97d4d7bfaa24ca7c0a 403 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 1 402 28.286 T 22-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 SMGD1_RS13195 355d62925ebb3c97d4d7bfaa24ca7c0a 403 Gene3D G3DSA:3.30.930.10 217 312 5.8E-89 T 22-04-2016 SMGD1_RS13195 355d62925ebb3c97d4d7bfaa24ca7c0a 403 Gene3D G3DSA:3.30.930.10 2 181 5.8E-89 T 22-04-2016 SMGD1_RS13195 355d62925ebb3c97d4d7bfaa24ca7c0a 403 Pfam PF13393 Histidyl-tRNA synthetase 7 308 4.6E-47 T 22-04-2016 SMGD1_RS13195 355d62925ebb3c97d4d7bfaa24ca7c0a 403 PANTHER PTHR11476:SF9 1 403 7.6E-165 T 22-04-2016 SMGD1_RS13195 355d62925ebb3c97d4d7bfaa24ca7c0a 403 Gene3D G3DSA:3.40.50.800 323 401 3.0E-16 T 22-04-2016 IPR004154 Anticodon-binding SMGD1_RS05620 d6d60123dba6be937efb0efed260db2f 165 Gene3D G3DSA:3.40.630.30 37 126 6.9E-12 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMGD1_RS05620 d6d60123dba6be937efb0efed260db2f 165 Pfam PF13508 Acetyltransferase (GNAT) domain 56 123 8.1E-9 T 22-04-2016 IPR000182 GNAT domain GO:0008080 SMGD1_RS05620 d6d60123dba6be937efb0efed260db2f 165 SUPERFAMILY SSF55729 36 146 9.55E-13 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMGD1_RS12980 4b098cda40346306475321ed547858a6 140 Pfam PF13690 Chemotaxis phosphatase CheX 48 112 2.1E-8 T 22-04-2016 IPR028051 Chemotaxis phosphatase CheX-like domain KEGG: 00231+3.-.-.-|KEGG: 00563+3.-.-.-|KEGG: 00983+3.-.-.- SMGD1_RS12980 4b098cda40346306475321ed547858a6 140 Gene3D G3DSA:3.40.1550.10 36 129 2.0E-6 T 22-04-2016 IPR028976 CheC-like domain SMGD1_RS12980 4b098cda40346306475321ed547858a6 140 SUPERFAMILY SSF103039 34 111 1.83E-6 T 22-04-2016 IPR028976 CheC-like domain SMGD1_RS10780 af66c20d33df8f35260f47846505c9da 244 SUPERFAMILY SSF55729 24 234 8.12E-25 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMGD1_RS10780 af66c20d33df8f35260f47846505c9da 244 PANTHER PTHR30098 30 232 5.0E-33 T 22-04-2016 SMGD1_RS10780 af66c20d33df8f35260f47846505c9da 244 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 74 222 8.2E-19 T 22-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 SMGD1_RS01170 b8445fc17ce01b647c4f19f7adbfc5d9 202 SMART SM00065 34 186 0.0045 T 22-04-2016 IPR003018 GAF domain GO:0005515 SMGD1_RS01170 b8445fc17ce01b647c4f19f7adbfc5d9 202 SUPERFAMILY SSF55781 9 177 1.85E-23 T 22-04-2016 IPR029016 GAF domain-like SMGD1_RS01170 b8445fc17ce01b647c4f19f7adbfc5d9 202 Gene3D G3DSA:3.30.450.40 24 179 7.6E-16 T 22-04-2016 IPR029016 GAF domain-like SMGD1_RS01170 b8445fc17ce01b647c4f19f7adbfc5d9 202 Pfam PF13185 GAF domain 34 177 7.1E-11 T 22-04-2016 IPR003018 GAF domain GO:0005515 SMGD1_RS12330 6c42892edb496fa9dcb1d4aeacae7e55 183 PANTHER PTHR20857:SF21 65 179 3.1E-13 T 22-04-2016 SMGD1_RS12330 6c42892edb496fa9dcb1d4aeacae7e55 183 Gene3D G3DSA:3.20.20.70 1 182 1.8E-32 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMGD1_RS12330 6c42892edb496fa9dcb1d4aeacae7e55 183 PANTHER PTHR20857 65 179 3.1E-13 T 22-04-2016 SMGD1_RS12330 6c42892edb496fa9dcb1d4aeacae7e55 183 SUPERFAMILY SSF51391 3 182 2.22E-26 T 22-04-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 SMGD1_RS12330 6c42892edb496fa9dcb1d4aeacae7e55 183 Pfam PF02581 Thiamine monophosphate synthase/TENI 25 180 1.1E-21 T 22-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 SMGD1_RS06845 a1cee14e66640b0170dce0d647c4fa29 394 Pfam PF00501 AMP-binding enzyme 45 239 2.3E-13 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 SMGD1_RS06845 a1cee14e66640b0170dce0d647c4fa29 394 Gene3D G3DSA:3.30.300.30 304 392 3.6E-9 T 22-04-2016 SMGD1_RS06845 a1cee14e66640b0170dce0d647c4fa29 394 Gene3D G3DSA:3.40.50.980 86 236 7.4E-14 T 22-04-2016 SMGD1_RS06845 a1cee14e66640b0170dce0d647c4fa29 394 SUPERFAMILY SSF56801 86 392 1.44E-29 T 22-04-2016 SMGD1_RS11060 fbf7c8d25f77648a619766654d7b7d23 298 Pfam PF00144 Beta-lactamase 14 281 5.4E-13 T 22-04-2016 IPR001466 Beta-lactamase-related SMGD1_RS11060 fbf7c8d25f77648a619766654d7b7d23 298 Gene3D G3DSA:3.40.710.10 15 283 5.5E-23 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SMGD1_RS11060 fbf7c8d25f77648a619766654d7b7d23 298 SUPERFAMILY SSF56601 17 293 4.88E-42 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SMGD1_RS11560 09f257aaa64efbd9c8edb151e290e1a4 148 Pfam PF03948 Ribosomal protein L9, C-terminal domain 66 146 1.8E-22 T 22-04-2016 IPR020069 Ribosomal protein L9, C-terminal SMGD1_RS11560 09f257aaa64efbd9c8edb151e290e1a4 148 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 46 7.1E-20 T 22-04-2016 IPR020070 Ribosomal protein L9, N-terminal SMGD1_RS11560 09f257aaa64efbd9c8edb151e290e1a4 148 SUPERFAMILY SSF55653 58 147 4.45E-22 T 22-04-2016 IPR020069 Ribosomal protein L9, C-terminal SMGD1_RS11560 09f257aaa64efbd9c8edb151e290e1a4 148 SUPERFAMILY SSF55658 1 51 3.84E-15 T 22-04-2016 IPR009027 Ribosomal protein L9/RNase H1, N-terminal SMGD1_RS11560 09f257aaa64efbd9c8edb151e290e1a4 148 Gene3D G3DSA:3.10.430.100 65 147 1.3E-22 T 22-04-2016 IPR020069 Ribosomal protein L9, C-terminal SMGD1_RS11560 09f257aaa64efbd9c8edb151e290e1a4 148 Gene3D G3DSA:3.40.5.10 1 49 9.6E-21 T 22-04-2016 IPR020070 Ribosomal protein L9, N-terminal SMGD1_RS11560 09f257aaa64efbd9c8edb151e290e1a4 148 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 22-04-2016 IPR020070 Ribosomal protein L9, N-terminal SMGD1_RS11560 09f257aaa64efbd9c8edb151e290e1a4 148 PANTHER PTHR21368 1 145 4.6E-37 T 22-04-2016 IPR000244 Ribosomal protein L9 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS11560 09f257aaa64efbd9c8edb151e290e1a4 148 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 148 22.343 T 22-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS11560 09f257aaa64efbd9c8edb151e290e1a4 148 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 147 7.3E-37 T 22-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS05045 721d09f6cd8dabfcd160216263499df0 445 SUPERFAMILY SSF161070 7 441 1.7E-117 T 22-04-2016 SMGD1_RS05045 721d09f6cd8dabfcd160216263499df0 445 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 26 40 - T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 SMGD1_RS05045 721d09f6cd8dabfcd160216263499df0 445 Pfam PF00209 Sodium:neurotransmitter symporter family 7 121 5.4E-24 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 SMGD1_RS05045 721d09f6cd8dabfcd160216263499df0 445 Pfam PF00209 Sodium:neurotransmitter symporter family 150 440 1.6E-25 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 SMGD1_RS05045 721d09f6cd8dabfcd160216263499df0 445 PANTHER PTHR11616:SF167 7 442 9.3E-121 T 22-04-2016 SMGD1_RS05045 721d09f6cd8dabfcd160216263499df0 445 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 296 315 6.6E-12 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 SMGD1_RS05045 721d09f6cd8dabfcd160216263499df0 445 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 39 58 6.6E-12 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 SMGD1_RS05045 721d09f6cd8dabfcd160216263499df0 445 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 10 31 6.6E-12 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 SMGD1_RS05045 721d09f6cd8dabfcd160216263499df0 445 PANTHER PTHR11616 7 442 9.3E-121 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 SMGD1_RS11955 ed92c3de738aa39a9d86a0e4cc474c65 131 Gene3D G3DSA:3.30.70.20 17 97 1.3E-14 T 22-04-2016 SMGD1_RS11955 ed92c3de738aa39a9d86a0e4cc474c65 131 PANTHER PTHR10849:SF13 1 97 1.9E-16 T 22-04-2016 SMGD1_RS11955 ed92c3de738aa39a9d86a0e4cc474c65 131 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 85 96 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SMGD1_RS11955 ed92c3de738aa39a9d86a0e4cc474c65 131 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 43 54 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SMGD1_RS11955 ed92c3de738aa39a9d86a0e4cc474c65 131 Pfam PF12838 4Fe-4S dicluster domain 43 97 2.9E-9 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SMGD1_RS11955 ed92c3de738aa39a9d86a0e4cc474c65 131 SUPERFAMILY SSF54862 21 97 1.26E-15 T 22-04-2016 SMGD1_RS11955 ed92c3de738aa39a9d86a0e4cc474c65 131 PANTHER PTHR10849 1 97 1.9E-16 T 22-04-2016 SMGD1_RS07635 afa4379fd1f9bfe6e74583d991169534 456 SUPERFAMILY SSF52129 216 448 1.15E-8 T 22-04-2016 IPR029030 Caspase-like domain SMGD1_RS07635 afa4379fd1f9bfe6e74583d991169534 456 Gene3D G3DSA:1.25.40.20 30 148 6.2E-21 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain SMGD1_RS07635 afa4379fd1f9bfe6e74583d991169534 456 Pfam PF12796 Ankyrin repeats (3 copies) 52 146 2.4E-12 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain SMGD1_RS07635 afa4379fd1f9bfe6e74583d991169534 456 SUPERFAMILY SSF48403 29 158 6.35E-22 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain SMGD1_RS07635 afa4379fd1f9bfe6e74583d991169534 456 Gene3D G3DSA:3.40.50.1460 225 356 2.0E-14 T 22-04-2016 IPR029030 Caspase-like domain SMGD1_RS07635 afa4379fd1f9bfe6e74583d991169534 456 PANTHER PTHR24133 52 148 3.9E-18 T 22-04-2016 SMGD1_RS07635 afa4379fd1f9bfe6e74583d991169534 456 Pfam PF00656 Caspase domain 222 449 1.2E-17 T 22-04-2016 SMGD1_RS07635 afa4379fd1f9bfe6e74583d991169534 456 SMART SM00248 83 112 0.025 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 SMGD1_RS07635 afa4379fd1f9bfe6e74583d991169534 456 SMART SM00248 47 76 0.078 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 SMGD1_RS07635 afa4379fd1f9bfe6e74583d991169534 456 SMART SM00248 116 145 0.33 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 SMGD1_RS06985 27e84299b83fb1f198de75d4576a0724 123 Gene3D G3DSA:3.10.129.10 46 121 4.4E-6 T 22-04-2016 IPR029069 HotDog domain SMGD1_RS00690 68ed3dfbd9ffcc895baf6f9349c449ec 777 Pfam PF03484 tRNA synthetase B5 domain 396 460 5.3E-14 T 22-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 SMGD1_RS00690 68ed3dfbd9ffcc895baf6f9349c449ec 777 SUPERFAMILY SSF46955 393 465 3.85E-15 T 22-04-2016 IPR009061 Putative DNA-binding domain SMGD1_RS00690 68ed3dfbd9ffcc895baf6f9349c449ec 777 SUPERFAMILY SSF56037 230 384 1.31E-6 T 22-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 SMGD1_RS00690 68ed3dfbd9ffcc895baf6f9349c449ec 777 Pfam PF03147 Ferredoxin-fold anticodon binding domain 685 777 1.4E-18 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 SMGD1_RS00690 68ed3dfbd9ffcc895baf6f9349c449ec 777 SUPERFAMILY SSF54991 681 777 1.44E-18 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 SMGD1_RS00690 68ed3dfbd9ffcc895baf6f9349c449ec 777 SMART SM00896 685 777 1.2E-24 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 SMGD1_RS00690 68ed3dfbd9ffcc895baf6f9349c449ec 777 Gene3D G3DSA:3.30.56.10 1 39 4.3E-21 T 22-04-2016 SMGD1_RS00690 68ed3dfbd9ffcc895baf6f9349c449ec 777 Gene3D G3DSA:3.30.56.10 157 187 4.3E-21 T 22-04-2016 SMGD1_RS00690 68ed3dfbd9ffcc895baf6f9349c449ec 777 Gene3D G3DSA:3.30.56.20 391 465 1.3E-19 T 22-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 SMGD1_RS00690 68ed3dfbd9ffcc895baf6f9349c449ec 777 Gene3D G3DSA:3.50.40.10 298 379 1.8E-4 T 22-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 SMGD1_RS00690 68ed3dfbd9ffcc895baf6f9349c449ec 777 SUPERFAMILY SSF50249 44 194 4.65E-43 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMGD1_RS00690 68ed3dfbd9ffcc895baf6f9349c449ec 777 Gene3D G3DSA:2.40.50.140 43 152 7.0E-41 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMGD1_RS00690 68ed3dfbd9ffcc895baf6f9349c449ec 777 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 771 33.556 T 22-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 SMGD1_RS00690 68ed3dfbd9ffcc895baf6f9349c449ec 777 SMART SM00874 392 461 8.4E-19 T 22-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 SMGD1_RS00690 68ed3dfbd9ffcc895baf6f9349c449ec 777 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 777 7.7E-182 T 22-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 SMGD1_RS00690 68ed3dfbd9ffcc895baf6f9349c449ec 777 PANTHER PTHR10947:SF0 2 777 1.0E-125 T 22-04-2016 SMGD1_RS00690 68ed3dfbd9ffcc895baf6f9349c449ec 777 PANTHER PTHR10947 2 777 1.0E-125 T 22-04-2016 SMGD1_RS00690 68ed3dfbd9ffcc895baf6f9349c449ec 777 Gene3D G3DSA:3.30.70.380 687 777 2.4E-17 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 SMGD1_RS00690 68ed3dfbd9ffcc895baf6f9349c449ec 777 Pfam PF01588 Putative tRNA binding domain 45 139 3.7E-28 T 22-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 SMGD1_RS00690 68ed3dfbd9ffcc895baf6f9349c449ec 777 SUPERFAMILY SSF55681 457 671 4.62E-23 T 22-04-2016 SMGD1_RS00690 68ed3dfbd9ffcc895baf6f9349c449ec 777 Gene3D G3DSA:3.30.930.10 484 674 4.3E-33 T 22-04-2016 SMGD1_RS05495 5e32d9969be7e94fe25aee5702424f71 618 SUPERFAMILY SSF48452 434 567 1.97E-13 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS05495 5e32d9969be7e94fe25aee5702424f71 618 Gene3D G3DSA:1.25.40.10 318 411 6.7E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS05495 5e32d9969be7e94fe25aee5702424f71 618 SMART SM00028 198 231 2.3 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMGD1_RS05495 5e32d9969be7e94fe25aee5702424f71 618 SMART SM00028 435 468 320.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMGD1_RS05495 5e32d9969be7e94fe25aee5702424f71 618 SMART SM00028 28 61 29.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMGD1_RS05495 5e32d9969be7e94fe25aee5702424f71 618 SMART SM00028 164 197 0.021 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMGD1_RS05495 5e32d9969be7e94fe25aee5702424f71 618 SMART SM00028 130 163 4.5E-8 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMGD1_RS05495 5e32d9969be7e94fe25aee5702424f71 618 SMART SM00028 529 562 240.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMGD1_RS05495 5e32d9969be7e94fe25aee5702424f71 618 SMART SM00028 495 528 0.89 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMGD1_RS05495 5e32d9969be7e94fe25aee5702424f71 618 SMART SM00028 320 353 210.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMGD1_RS05495 5e32d9969be7e94fe25aee5702424f71 618 SMART SM00028 96 129 3.4 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMGD1_RS05495 5e32d9969be7e94fe25aee5702424f71 618 SMART SM00028 62 95 310.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMGD1_RS05495 5e32d9969be7e94fe25aee5702424f71 618 PANTHER PTHR23083 445 468 5.0E-50 T 22-04-2016 SMGD1_RS05495 5e32d9969be7e94fe25aee5702424f71 618 PANTHER PTHR23083 495 565 5.0E-50 T 22-04-2016 SMGD1_RS05495 5e32d9969be7e94fe25aee5702424f71 618 PANTHER PTHR23083 32 241 5.0E-50 T 22-04-2016 SMGD1_RS05495 5e32d9969be7e94fe25aee5702424f71 618 Pfam PF00515 Tetratricopeptide repeat 131 163 8.2E-9 T 22-04-2016 IPR001440 Tetratricopeptide repeat 1 GO:0005515 SMGD1_RS05495 5e32d9969be7e94fe25aee5702424f71 618 SUPERFAMILY SSF48452 325 405 4.14E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS05495 5e32d9969be7e94fe25aee5702424f71 618 SUPERFAMILY SSF48452 32 228 9.48E-36 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS05495 5e32d9969be7e94fe25aee5702424f71 618 Pfam PF13181 Tetratricopeptide repeat 101 129 0.0043 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMGD1_RS05495 5e32d9969be7e94fe25aee5702424f71 618 Gene3D G3DSA:1.25.40.10 149 226 2.4E-20 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS05495 5e32d9969be7e94fe25aee5702424f71 618 Gene3D G3DSA:1.25.40.10 31 148 1.4E-27 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS05495 5e32d9969be7e94fe25aee5702424f71 618 Pfam PF13432 Tetratricopeptide repeat 505 563 0.0033 T 22-04-2016 SMGD1_RS05495 5e32d9969be7e94fe25aee5702424f71 618 SUPERFAMILY SSF50156 228 309 3.29E-12 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SMGD1_RS05495 5e32d9969be7e94fe25aee5702424f71 618 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 227 299 1.4E-7 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SMGD1_RS05495 5e32d9969be7e94fe25aee5702424f71 618 Pfam PF14559 Tetratricopeptide repeat 38 94 1.6E-6 T 22-04-2016 SMGD1_RS05495 5e32d9969be7e94fe25aee5702424f71 618 Pfam PF14559 Tetratricopeptide repeat 175 224 1.2E-5 T 22-04-2016 SMGD1_RS05495 5e32d9969be7e94fe25aee5702424f71 618 SMART SM00228 231 302 4.0E-7 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SMGD1_RS05495 5e32d9969be7e94fe25aee5702424f71 618 Gene3D G3DSA:1.25.40.10 437 569 3.6E-13 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS05495 5e32d9969be7e94fe25aee5702424f71 618 Gene3D G3DSA:2.30.42.10 232 313 3.9E-17 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SMGD1_RS09840 69f4e9b21780386665d2b483c54828f9 249 PANTHER PTHR10859:SF99 1 125 1.2E-19 T 22-04-2016 SMGD1_RS09840 69f4e9b21780386665d2b483c54828f9 249 SUPERFAMILY SSF53448 3 133 4.3E-20 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMGD1_RS09840 69f4e9b21780386665d2b483c54828f9 249 Gene3D G3DSA:3.90.550.10 2 133 4.8E-12 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMGD1_RS09840 69f4e9b21780386665d2b483c54828f9 249 Pfam PF00535 Glycosyl transferase family 2 9 123 3.4E-12 T 22-04-2016 IPR001173 Glycosyltransferase 2-like SMGD1_RS09840 69f4e9b21780386665d2b483c54828f9 249 PANTHER PTHR10859 1 125 1.2E-19 T 22-04-2016 SMGD1_RS08710 4f9cba5f40381409065a57b7b1bd846d 369 Gene3D G3DSA:1.10.710.10 22 208 1.8E-11 T 22-04-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 SMGD1_RS08710 4f9cba5f40381409065a57b7b1bd846d 369 Pfam PF13435 Cytochrome c554 and c-prime 29 114 9.7E-8 T 22-04-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 SMGD1_RS08710 4f9cba5f40381409065a57b7b1bd846d 369 SUPERFAMILY SSF48695 20 234 1.68E-22 T 22-04-2016 IPR011031 Multihaem cytochrome SMGD1_RS01145 bc95bc56b7fedd0571685650e0058a7d 179 PANTHER PTHR26402 20 162 3.1E-28 T 22-04-2016 SMGD1_RS01145 bc95bc56b7fedd0571685650e0058a7d 179 SMART SM00448 20 131 5.1E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS01145 bc95bc56b7fedd0571685650e0058a7d 179 Gene3D G3DSA:3.40.50.2300 19 155 8.6E-30 T 22-04-2016 SMGD1_RS01145 bc95bc56b7fedd0571685650e0058a7d 179 SUPERFAMILY SSF52172 19 158 2.13E-32 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS01145 bc95bc56b7fedd0571685650e0058a7d 179 Pfam PF00072 Response regulator receiver domain 22 130 9.1E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS00205 7640b1c07862a461df5c5a064ba55bff 418 PANTHER PTHR10120:SF24 1 398 3.2E-94 T 22-04-2016 IPR027057 CAAX prenyl protease 1 GO:0008233|GO:0071586 KEGG: 00900+3.4.24.84 SMGD1_RS00205 7640b1c07862a461df5c5a064ba55bff 418 Gene3D G3DSA:3.30.2010.10 192 281 2.9E-17 T 22-04-2016 SMGD1_RS00205 7640b1c07862a461df5c5a064ba55bff 418 PANTHER PTHR10120 1 398 3.2E-94 T 22-04-2016 SMGD1_RS00205 7640b1c07862a461df5c5a064ba55bff 418 Pfam PF16491 CAAX prenyl protease N-terminal, five membrane helices 37 193 1.4E-31 T 22-04-2016 IPR032456 CAAX prenyl protease 1, N-terminal KEGG: 00900+3.4.24.84 SMGD1_RS00205 7640b1c07862a461df5c5a064ba55bff 418 Pfam PF01435 Peptidase family M48 196 398 1.3E-38 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 SMGD1_RS09885 cb0b4aa77c14998c0eaca33b3f30694e 573 SUPERFAMILY SSF90123 10 321 8.24E-77 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SMGD1_RS09885 cb0b4aa77c14998c0eaca33b3f30694e 573 Gene3D G3DSA:1.20.1560.10 10 321 2.0E-76 T 22-04-2016 SMGD1_RS09885 cb0b4aa77c14998c0eaca33b3f30694e 573 SMART SM00382 362 547 1.2E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain SMGD1_RS09885 cb0b4aa77c14998c0eaca33b3f30694e 573 Gene3D G3DSA:3.40.50.300 338 565 7.5E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS09885 cb0b4aa77c14998c0eaca33b3f30694e 573 Pfam PF00005 ABC transporter 353 501 1.4E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMGD1_RS09885 cb0b4aa77c14998c0eaca33b3f30694e 573 Pfam PF00664 ABC transporter transmembrane region 24 293 5.8E-46 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SMGD1_RS09885 cb0b4aa77c14998c0eaca33b3f30694e 573 ProSitePatterns PS00211 ABC transporters family signature. 473 487 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMGD1_RS09885 cb0b4aa77c14998c0eaca33b3f30694e 573 PANTHER PTHR24221 9 567 3.1E-188 T 22-04-2016 SMGD1_RS09885 cb0b4aa77c14998c0eaca33b3f30694e 573 SUPERFAMILY SSF52540 335 568 2.0E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS14210 598a613fc20d0be2932df5ba8802c952 438 Pfam PF01554 MatE 20 179 5.3E-26 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 SMGD1_RS14210 598a613fc20d0be2932df5ba8802c952 438 Pfam PF01554 MatE 240 392 2.6E-24 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 SMGD1_RS14210 598a613fc20d0be2932df5ba8802c952 438 TIGRFAM TIGR00797 matE: MATE efflux family protein 20 411 1.2E-63 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 SMGD1_RS14210 598a613fc20d0be2932df5ba8802c952 438 PIRSF PIRSF006603 1 435 2.5E-94 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 SMGD1_RS14210 598a613fc20d0be2932df5ba8802c952 438 PANTHER PTHR11206 4 436 4.3E-98 T 22-04-2016 SMGD1_RS14210 598a613fc20d0be2932df5ba8802c952 438 PANTHER PTHR11206:SF132 4 436 4.3E-98 T 22-04-2016 SMGD1_RS00845 da167ea105266e95680ef3863ce1bd2a 184 Gene3D G3DSA:3.40.30.10 3 181 1.4E-30 T 22-04-2016 IPR012336 Thioredoxin-like fold SMGD1_RS00845 da167ea105266e95680ef3863ce1bd2a 184 SUPERFAMILY SSF52833 1 179 8.33E-25 T 22-04-2016 IPR012336 Thioredoxin-like fold SMGD1_RS00845 da167ea105266e95680ef3863ce1bd2a 184 Pfam PF00578 AhpC/TSA family 52 136 4.6E-10 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 SMGD1_RS07145 f1b6fa280c9c67d883726985430bcc94 297 Pfam PF02885 Glycosyl transferase family, helical bundle domain 6 65 2.2E-7 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain SMGD1_RS07145 f1b6fa280c9c67d883726985430bcc94 297 Gene3D G3DSA:3.40.1030.10 135 295 2.0E-18 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 SMGD1_RS07145 f1b6fa280c9c67d883726985430bcc94 297 Gene3D G3DSA:1.20.970.10 10 65 3.2E-11 T 22-04-2016 SMGD1_RS07145 f1b6fa280c9c67d883726985430bcc94 297 Pfam PF00591 Glycosyl transferase family, a/b domain 146 296 9.1E-7 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 SMGD1_RS07145 f1b6fa280c9c67d883726985430bcc94 297 SUPERFAMILY SSF52418 82 295 1.13E-27 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 SMGD1_RS07145 f1b6fa280c9c67d883726985430bcc94 297 SUPERFAMILY SSF47648 8 69 1.19E-11 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain SMGD1_RS05230 dbf904bb972fefefcc3a0575737c6daf 254 Pfam PF00977 Histidine biosynthesis protein 5 232 6.6E-67 T 22-04-2016 IPR006062 Histidine biosynthesis GO:0000105 SMGD1_RS05230 dbf904bb972fefefcc3a0575737c6daf 254 PANTHER PTHR21235 1 254 1.9E-86 T 22-04-2016 SMGD1_RS05230 dbf904bb972fefefcc3a0575737c6daf 254 SUPERFAMILY SSF51366 1 251 1.65E-65 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 SMGD1_RS05230 dbf904bb972fefefcc3a0575737c6daf 254 Gene3D G3DSA:3.20.20.70 5 252 1.8E-77 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMGD1_RS05230 dbf904bb972fefefcc3a0575737c6daf 254 PANTHER PTHR21235:SF2 1 254 1.9E-86 T 22-04-2016 SMGD1_RS03725 9142a7d4a110b1a313c8fcee0041e2be 178 Pfam PF01386 Ribosomal L25p family 2 87 3.9E-14 T 22-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 SMGD1_RS03725 9142a7d4a110b1a313c8fcee0041e2be 178 Gene3D G3DSA:2.170.120.20 96 177 6.3E-15 T 22-04-2016 IPR020057 Ribosomal protein L25, beta domain SMGD1_RS03725 9142a7d4a110b1a313c8fcee0041e2be 178 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 2 88 3.0E-34 T 22-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 SMGD1_RS03725 9142a7d4a110b1a313c8fcee0041e2be 178 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 97 177 5.6E-13 T 22-04-2016 IPR020057 Ribosomal protein L25, beta domain SMGD1_RS03725 9142a7d4a110b1a313c8fcee0041e2be 178 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 2 176 8.6E-40 T 22-04-2016 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 SMGD1_RS03725 9142a7d4a110b1a313c8fcee0041e2be 178 SUPERFAMILY SSF50715 6 176 1.92E-38 T 22-04-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 SMGD1_RS03725 9142a7d4a110b1a313c8fcee0041e2be 178 PANTHER PTHR33284 2 175 1.2E-21 T 22-04-2016 SMGD1_RS03725 9142a7d4a110b1a313c8fcee0041e2be 178 Gene3D G3DSA:2.40.240.10 2 88 4.2E-17 T 22-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 SMGD1_RS04420 f6d551fab7411bec83d68823d38c678f 237 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 102 222 2.6E-28 T 22-04-2016 IPR007472 Arginine-tRNA-protein transferase, C-terminal GO:0004057|GO:0016598 SMGD1_RS04420 f6d551fab7411bec83d68823d38c678f 237 PANTHER PTHR21367 13 220 7.0E-36 T 22-04-2016 IPR030700 Arginine-tRNA-protein transferase SMGD1_RS04420 f6d551fab7411bec83d68823d38c678f 237 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 12 80 7.0E-15 T 22-04-2016 IPR007471 Arginine-tRNA-protein transferase, N-terminal GO:0004057|GO:0016598 SMGD1_RS04420 f6d551fab7411bec83d68823d38c678f 237 PIRSF PIRSF037208 2 236 1.3E-66 T 22-04-2016 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic SMGD1_RS04420 f6d551fab7411bec83d68823d38c678f 237 PANTHER PTHR21367:SF0 13 220 7.0E-36 T 22-04-2016 SMGD1_RS04420 f6d551fab7411bec83d68823d38c678f 237 SUPERFAMILY SSF55729 73 223 3.01E-23 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMGD1_RS01175 f8332333008ebe4e09867397825fd4a6 553 Gene3D G3DSA:3.20.20.450 302 551 6.8E-93 T 22-04-2016 IPR001633 EAL domain SMGD1_RS01175 f8332333008ebe4e09867397825fd4a6 553 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 123 287 1.9E-50 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS01175 f8332333008ebe4e09867397825fd4a6 553 SUPERFAMILY SSF141868 304 551 3.14E-84 T 22-04-2016 IPR001633 EAL domain SMGD1_RS01175 f8332333008ebe4e09867397825fd4a6 553 Pfam PF00563 EAL domain 304 539 1.9E-70 T 22-04-2016 IPR001633 EAL domain SMGD1_RS01175 f8332333008ebe4e09867397825fd4a6 553 Pfam PF00990 Diguanylate cyclase, GGDEF domain 127 284 3.5E-54 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS01175 f8332333008ebe4e09867397825fd4a6 553 Pfam PF08448 PAS fold 2 110 2.3E-5 T 22-04-2016 IPR013656 PAS fold-4 SMGD1_RS01175 f8332333008ebe4e09867397825fd4a6 553 Gene3D G3DSA:3.30.450.20 2 124 8.1E-7 T 22-04-2016 SMGD1_RS01175 f8332333008ebe4e09867397825fd4a6 553 SUPERFAMILY SSF55785 5 118 3.66E-9 T 22-04-2016 IPR000014 PAS domain SMGD1_RS01175 f8332333008ebe4e09867397825fd4a6 553 SMART SM00267 116 288 5.9E-66 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS01175 f8332333008ebe4e09867397825fd4a6 553 PANTHER PTHR10799:SF774 160 398 2.2E-85 T 22-04-2016 SMGD1_RS01175 f8332333008ebe4e09867397825fd4a6 553 PANTHER PTHR10799:SF774 3 10 2.2E-85 T 22-04-2016 SMGD1_RS01175 f8332333008ebe4e09867397825fd4a6 553 PANTHER PTHR10799 160 398 2.2E-85 T 22-04-2016 SMGD1_RS01175 f8332333008ebe4e09867397825fd4a6 553 PANTHER PTHR10799 3 10 2.2E-85 T 22-04-2016 SMGD1_RS01175 f8332333008ebe4e09867397825fd4a6 553 SUPERFAMILY SSF55073 132 290 3.37E-51 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS01175 f8332333008ebe4e09867397825fd4a6 553 Gene3D G3DSA:3.30.70.270 128 293 6.1E-58 T 22-04-2016 SMGD1_RS01175 f8332333008ebe4e09867397825fd4a6 553 SMART SM00052 298 544 6.7E-109 T 22-04-2016 IPR001633 EAL domain SMGD1_RS07200 3d2ec843e5277494db1c8de85b629608 263 SUPERFAMILY SSF53633 8 248 8.38E-58 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SMGD1_RS07200 3d2ec843e5277494db1c8de85b629608 263 Hamap MF_00456 Glutamate 5-kinase [proB]. 8 259 28.923 T 22-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 SMGD1_RS07200 3d2ec843e5277494db1c8de85b629608 263 ProSitePatterns PS00902 Glutamate 5-kinase signature. 206 223 - T 22-04-2016 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 SMGD1_RS07200 3d2ec843e5277494db1c8de85b629608 263 Gene3D G3DSA:3.40.1160.10 7 241 1.3E-43 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SMGD1_RS07200 3d2ec843e5277494db1c8de85b629608 263 TIGRFAM TIGR01027 proB: glutamate 5-kinase 8 246 1.0E-66 T 22-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 SMGD1_RS07200 3d2ec843e5277494db1c8de85b629608 263 Pfam PF00696 Amino acid kinase family 8 233 3.2E-40 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SMGD1_RS07200 3d2ec843e5277494db1c8de85b629608 263 PANTHER PTHR11063:SF12 1 235 4.6E-46 T 22-04-2016 SMGD1_RS07200 3d2ec843e5277494db1c8de85b629608 263 PANTHER PTHR11063 1 235 4.6E-46 T 22-04-2016 SMGD1_RS07200 3d2ec843e5277494db1c8de85b629608 263 PRINTS PR00474 Glutamate 5-kinase family signature 75 103 3.5E-40 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 SMGD1_RS07200 3d2ec843e5277494db1c8de85b629608 263 PRINTS PR00474 Glutamate 5-kinase family signature 147 174 3.5E-40 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 SMGD1_RS07200 3d2ec843e5277494db1c8de85b629608 263 PRINTS PR00474 Glutamate 5-kinase family signature 208 228 3.5E-40 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 SMGD1_RS07200 3d2ec843e5277494db1c8de85b629608 263 PRINTS PR00474 Glutamate 5-kinase family signature 43 57 3.5E-40 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 SMGD1_RS07200 3d2ec843e5277494db1c8de85b629608 263 PRINTS PR00474 Glutamate 5-kinase family signature 115 136 3.5E-40 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 SMGD1_RS07200 3d2ec843e5277494db1c8de85b629608 263 PIRSF PIRSF000729 3 263 2.5E-68 T 22-04-2016 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 SMGD1_RS12285 c568922695c1ef1b0c9918cacc12833e 403 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 290 398 1.9E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS12285 c568922695c1ef1b0c9918cacc12833e 403 SUPERFAMILY SSF55785 13 113 2.09E-27 T 22-04-2016 IPR000014 PAS domain SMGD1_RS12285 c568922695c1ef1b0c9918cacc12833e 403 PRINTS PR00344 Bacterial sensor protein C-terminal signature 384 397 7.891014E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS12285 c568922695c1ef1b0c9918cacc12833e 403 PRINTS PR00344 Bacterial sensor protein C-terminal signature 347 357 7.891014E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS12285 c568922695c1ef1b0c9918cacc12833e 403 PRINTS PR00344 Bacterial sensor protein C-terminal signature 360 378 7.891014E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS12285 c568922695c1ef1b0c9918cacc12833e 403 PRINTS PR00344 Bacterial sensor protein C-terminal signature 329 343 7.891014E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS12285 c568922695c1ef1b0c9918cacc12833e 403 Gene3D G3DSA:3.30.450.20 14 115 1.4E-25 T 22-04-2016 SMGD1_RS12285 c568922695c1ef1b0c9918cacc12833e 403 SUPERFAMILY SSF55874 247 400 2.62E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS12285 c568922695c1ef1b0c9918cacc12833e 403 Pfam PF08447 PAS fold 25 109 1.6E-13 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 SMGD1_RS12285 c568922695c1ef1b0c9918cacc12833e 403 SMART SM00086 74 116 3.5E-5 T 22-04-2016 IPR001610 PAC motif SMGD1_RS12285 c568922695c1ef1b0c9918cacc12833e 403 SUPERFAMILY SSF47384 175 247 2.75E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS12285 c568922695c1ef1b0c9918cacc12833e 403 PANTHER PTHR24423 179 402 2.6E-51 T 22-04-2016 SMGD1_RS12285 c568922695c1ef1b0c9918cacc12833e 403 PANTHER PTHR24423 12 140 2.6E-51 T 22-04-2016 SMGD1_RS12285 c568922695c1ef1b0c9918cacc12833e 403 Gene3D G3DSA:3.30.565.10 237 401 4.2E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS12285 c568922695c1ef1b0c9918cacc12833e 403 SMART SM00091 3 69 0.0064 T 22-04-2016 IPR000014 PAS domain SMGD1_RS12285 c568922695c1ef1b0c9918cacc12833e 403 Gene3D G3DSA:1.10.287.130 176 236 2.8E-4 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS12285 c568922695c1ef1b0c9918cacc12833e 403 SMART SM00387 288 400 2.1E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS12285 c568922695c1ef1b0c9918cacc12833e 403 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 3 122 4.2E-20 T 22-04-2016 IPR000014 PAS domain SMGD1_RS02550 5724adca349e83833f08b67b51a5991f 239 Pfam PF08889 WbqC-like protein family 7 226 4.4E-57 T 22-04-2016 IPR014985 WbqC-like protein family SMGD1_RS02220 3e2b5c8e12da74b48b29ae83a3b3971e 262 PANTHER PTHR23416 4 249 3.5E-109 T 22-04-2016 SMGD1_RS02220 3e2b5c8e12da74b48b29ae83a3b3971e 262 SUPERFAMILY SSF51161 3 235 8.73E-72 T 22-04-2016 IPR011004 Trimeric LpxA-like SMGD1_RS02220 3e2b5c8e12da74b48b29ae83a3b3971e 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 33 66 1.3E-4 T 22-04-2016 IPR001451 Hexapeptide repeat SMGD1_RS02220 3e2b5c8e12da74b48b29ae83a3b3971e 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 3 30 1.1E-5 T 22-04-2016 IPR001451 Hexapeptide repeat SMGD1_RS02220 3e2b5c8e12da74b48b29ae83a3b3971e 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 106 139 2.2E-7 T 22-04-2016 IPR001451 Hexapeptide repeat SMGD1_RS02220 3e2b5c8e12da74b48b29ae83a3b3971e 262 PANTHER PTHR23416:SF8 4 249 3.5E-109 T 22-04-2016 SMGD1_RS02220 3e2b5c8e12da74b48b29ae83a3b3971e 262 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 177 255 5.1E-22 T 22-04-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 SMGD1_RS02220 3e2b5c8e12da74b48b29ae83a3b3971e 262 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 2 257 43.138 T 22-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 SMGD1_RS02220 3e2b5c8e12da74b48b29ae83a3b3971e 262 Gene3D G3DSA:2.160.10.10 3 189 2.4E-48 T 22-04-2016 SMGD1_RS02220 3e2b5c8e12da74b48b29ae83a3b3971e 262 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 150 178 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 SMGD1_RS02220 3e2b5c8e12da74b48b29ae83a3b3971e 262 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 132 160 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 SMGD1_RS02220 3e2b5c8e12da74b48b29ae83a3b3971e 262 Gene3D G3DSA:1.20.1180.10 195 261 5.6E-24 T 22-04-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 SMGD1_RS02220 3e2b5c8e12da74b48b29ae83a3b3971e 262 PIRSF PIRSF000456 1 261 6.8E-103 T 22-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 SMGD1_RS02220 3e2b5c8e12da74b48b29ae83a3b3971e 262 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 5 255 2.7E-102 T 22-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 SMGD1_RS11835 b3f309208363f278ad2344b686abc5de 340 Gene3D G3DSA:2.40.40.10 156 338 1.3E-40 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain SMGD1_RS11835 b3f309208363f278ad2344b686abc5de 340 Gene3D G3DSA:2.40.40.10 10 154 4.9E-29 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain SMGD1_RS11835 b3f309208363f278ad2344b686abc5de 340 PIRSF PIRSF019422 2 340 7.4E-108 T 22-04-2016 IPR026044 Membrane-bound lytic murein transglycosylase A SMGD1_RS11835 b3f309208363f278ad2344b686abc5de 340 PANTHER PTHR30124 16 340 2.1E-92 T 22-04-2016 SMGD1_RS11835 b3f309208363f278ad2344b686abc5de 340 PANTHER PTHR30124:SF0 16 340 2.1E-92 T 22-04-2016 SMGD1_RS11835 b3f309208363f278ad2344b686abc5de 340 Pfam PF03562 MltA specific insert domain 21 245 1.6E-70 T 22-04-2016 IPR005300 Lytic transglycosylase MltA GO:0004553 SMGD1_RS11835 b3f309208363f278ad2344b686abc5de 340 Pfam PF06725 3D domain 263 334 2.1E-21 T 22-04-2016 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 SMGD1_RS11835 b3f309208363f278ad2344b686abc5de 340 SUPERFAMILY SSF50685 5 338 5.93E-111 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain SMGD1_RS11835 b3f309208363f278ad2344b686abc5de 340 SMART SM00925 90 245 3.4E-69 T 22-04-2016 IPR005300 Lytic transglycosylase MltA GO:0004553 SMGD1_RS06235 72aa2ab62c3d56722d5bc7abd52ff45a 140 TIGRFAM TIGR01068 thioredoxin: thioredoxin 41 138 1.3E-34 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 SMGD1_RS06235 72aa2ab62c3d56722d5bc7abd52ff45a 140 PRINTS PR00421 Thioredoxin family signature 104 115 1.9E-9 T 22-04-2016 SMGD1_RS06235 72aa2ab62c3d56722d5bc7abd52ff45a 140 PRINTS PR00421 Thioredoxin family signature 64 73 1.9E-9 T 22-04-2016 SMGD1_RS06235 72aa2ab62c3d56722d5bc7abd52ff45a 140 PRINTS PR00421 Thioredoxin family signature 56 64 1.9E-9 T 22-04-2016 SMGD1_RS06235 72aa2ab62c3d56722d5bc7abd52ff45a 140 Gene3D G3DSA:3.40.30.10 34 135 1.3E-33 T 22-04-2016 IPR012336 Thioredoxin-like fold SMGD1_RS06235 72aa2ab62c3d56722d5bc7abd52ff45a 140 PANTHER PTHR10438 24 135 1.0E-38 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 SMGD1_RS06235 72aa2ab62c3d56722d5bc7abd52ff45a 140 Pfam PF00085 Thioredoxin 38 134 7.8E-29 T 22-04-2016 IPR013766 Thioredoxin domain GO:0045454 SMGD1_RS06235 72aa2ab62c3d56722d5bc7abd52ff45a 140 PANTHER PTHR10438:SF266 24 135 1.0E-38 T 22-04-2016 SMGD1_RS06235 72aa2ab62c3d56722d5bc7abd52ff45a 140 ProSitePatterns PS00194 Thioredoxin family active site. 57 75 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 SMGD1_RS06235 72aa2ab62c3d56722d5bc7abd52ff45a 140 SUPERFAMILY SSF52833 25 129 2.4E-35 T 22-04-2016 IPR012336 Thioredoxin-like fold SMGD1_RS12630 1c8fc84299079958b60d2a95824cc623 229 Gene3D G3DSA:1.25.40.10 43 228 2.7E-41 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS12630 1c8fc84299079958b60d2a95824cc623 229 SUPERFAMILY SSF81901 42 221 4.88E-38 T 22-04-2016 SMGD1_RS12630 1c8fc84299079958b60d2a95824cc623 229 PANTHER PTHR11102 52 228 6.9E-31 T 22-04-2016 SMGD1_RS12630 1c8fc84299079958b60d2a95824cc623 229 SMART SM00671 31 68 210.0 T 22-04-2016 IPR006597 Sel1-like repeat SMGD1_RS12630 1c8fc84299079958b60d2a95824cc623 229 SMART SM00671 69 104 1.7E-6 T 22-04-2016 IPR006597 Sel1-like repeat SMGD1_RS12630 1c8fc84299079958b60d2a95824cc623 229 SMART SM00671 142 177 3.6E-6 T 22-04-2016 IPR006597 Sel1-like repeat SMGD1_RS12630 1c8fc84299079958b60d2a95824cc623 229 SMART SM00671 178 213 9.0E-4 T 22-04-2016 IPR006597 Sel1-like repeat SMGD1_RS12630 1c8fc84299079958b60d2a95824cc623 229 SMART SM00671 105 141 2.5E-5 T 22-04-2016 IPR006597 Sel1-like repeat SMGD1_RS12630 1c8fc84299079958b60d2a95824cc623 229 Pfam PF08238 Sel1 repeat 180 213 0.0069 T 22-04-2016 IPR006597 Sel1-like repeat SMGD1_RS12630 1c8fc84299079958b60d2a95824cc623 229 Pfam PF08238 Sel1 repeat 71 104 2.9E-5 T 22-04-2016 IPR006597 Sel1-like repeat SMGD1_RS12630 1c8fc84299079958b60d2a95824cc623 229 Pfam PF08238 Sel1 repeat 106 141 0.054 T 22-04-2016 IPR006597 Sel1-like repeat SMGD1_RS12630 1c8fc84299079958b60d2a95824cc623 229 Pfam PF08238 Sel1 repeat 143 165 0.18 T 22-04-2016 IPR006597 Sel1-like repeat SMGD1_RS02030 c565f125b535380bed912b7332df74aa 412 Gene3D G3DSA:3.40.50.300 214 374 9.5E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS02030 c565f125b535380bed912b7332df74aa 412 Pfam PF00270 DEAD/DEAH box helicase 25 194 2.0E-47 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SMGD1_RS02030 c565f125b535380bed912b7332df74aa 412 SMART SM00487 20 223 6.2E-55 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SMGD1_RS02030 c565f125b535380bed912b7332df74aa 412 Pfam PF00271 Helicase conserved C-terminal domain 238 340 1.5E-28 T 22-04-2016 IPR001650 Helicase, C-terminal SMGD1_RS02030 c565f125b535380bed912b7332df74aa 412 PANTHER PTHR24031 1 387 9.0E-155 T 22-04-2016 SMGD1_RS02030 c565f125b535380bed912b7332df74aa 412 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site SMGD1_RS02030 c565f125b535380bed912b7332df74aa 412 SMART SM00490 259 340 1.1E-34 T 22-04-2016 IPR001650 Helicase, C-terminal SMGD1_RS02030 c565f125b535380bed912b7332df74aa 412 SUPERFAMILY SSF52540 74 361 6.25E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS02030 c565f125b535380bed912b7332df74aa 412 Gene3D G3DSA:3.40.50.300 1 213 4.8E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS13015 2f0fe7f1fef3f5caead169a633e3e6d6 381 Gene3D G3DSA:3.40.50.1970 1 184 9.8E-56 T 22-04-2016 SMGD1_RS13015 2f0fe7f1fef3f5caead169a633e3e6d6 381 Gene3D G3DSA:1.20.1090.10 186 380 3.2E-42 T 22-04-2016 SMGD1_RS13015 2f0fe7f1fef3f5caead169a633e3e6d6 381 PANTHER PTHR11496 1 381 1.1E-94 T 22-04-2016 SMGD1_RS13015 2f0fe7f1fef3f5caead169a633e3e6d6 381 SUPERFAMILY SSF56796 1 380 8.11E-98 T 22-04-2016 SMGD1_RS13015 2f0fe7f1fef3f5caead169a633e3e6d6 381 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 356 9.2E-93 T 22-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 SMGD1_RS05175 98678888772ae998d26eeb99a05b047a 275 PANTHER PTHR10000:SF8 6 275 4.2E-26 T 22-04-2016 SMGD1_RS05175 98678888772ae998d26eeb99a05b047a 275 PANTHER PTHR10000 6 275 4.2E-26 T 22-04-2016 SMGD1_RS05175 98678888772ae998d26eeb99a05b047a 275 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 6 241 1.0E-17 T 22-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 SMGD1_RS05175 98678888772ae998d26eeb99a05b047a 275 SUPERFAMILY SSF56784 2 271 1.52E-45 T 22-04-2016 IPR023214 HAD-like domain SMGD1_RS05175 98678888772ae998d26eeb99a05b047a 275 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 269 9.9E-43 T 22-04-2016 IPR023214 HAD-like domain SMGD1_RS05175 98678888772ae998d26eeb99a05b047a 275 Gene3D G3DSA:3.40.50.1000 186 270 7.7E-35 T 22-04-2016 IPR023214 HAD-like domain SMGD1_RS05175 98678888772ae998d26eeb99a05b047a 275 Gene3D G3DSA:3.40.50.1000 1 82 7.7E-35 T 22-04-2016 IPR023214 HAD-like domain SMGD1_RS05175 98678888772ae998d26eeb99a05b047a 275 ProSitePatterns PS01229 Hypothetical cof family signature 2. 222 244 - T 22-04-2016 SMGD1_RS02065 87d21c2e70eb74278b9df1e37330072d 545 Pfam PF00069 Protein kinase domain 272 449 2.4E-22 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 SMGD1_RS02065 87d21c2e70eb74278b9df1e37330072d 545 SUPERFAMILY SSF56112 266 500 2.83E-35 T 22-04-2016 IPR011009 Protein kinase-like domain SMGD1_RS02065 87d21c2e70eb74278b9df1e37330072d 545 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 367 379 - T 22-04-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 SMGD1_RS02065 87d21c2e70eb74278b9df1e37330072d 545 SUPERFAMILY SSF81606 10 225 1.02E-40 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 SMGD1_RS02065 87d21c2e70eb74278b9df1e37330072d 545 SMART SM00220 261 510 9.7E-10 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 SMGD1_RS02065 87d21c2e70eb74278b9df1e37330072d 545 Gene3D G3DSA:1.10.510.10 309 492 2.4E-30 T 22-04-2016 SMGD1_RS02065 87d21c2e70eb74278b9df1e37330072d 545 Pfam PF13672 Protein phosphatase 2C 21 189 2.3E-13 T 22-04-2016 SMGD1_RS02065 87d21c2e70eb74278b9df1e37330072d 545 SMART SM00332 2 223 9.2E-14 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 SMGD1_RS02065 87d21c2e70eb74278b9df1e37330072d 545 Gene3D G3DSA:3.60.40.10 20 225 4.1E-35 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 SMGD1_RS02065 87d21c2e70eb74278b9df1e37330072d 545 SMART SM00331 5 225 5.2E-15 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 SMGD1_RS02065 87d21c2e70eb74278b9df1e37330072d 545 PANTHER PTHR24362 77 502 7.6E-28 T 22-04-2016 SMGD1_RS02065 87d21c2e70eb74278b9df1e37330072d 545 PANTHER PTHR24362:SF282 77 502 7.6E-28 T 22-04-2016 SMGD1_RS08440 f3f570cd16edd3233d9b0a85cdae8b81 328 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 5 328 21.397 T 22-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 SMGD1_RS08440 f3f570cd16edd3233d9b0a85cdae8b81 328 PANTHER PTHR11432:SF3 1 328 6.3E-112 T 22-04-2016 SMGD1_RS08440 f3f570cd16edd3233d9b0a85cdae8b81 328 Pfam PF00146 NADH dehydrogenase 12 324 2.6E-102 T 22-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 SMGD1_RS08440 f3f570cd16edd3233d9b0a85cdae8b81 328 PANTHER PTHR11432 1 328 6.3E-112 T 22-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 SMGD1_RS08440 f3f570cd16edd3233d9b0a85cdae8b81 328 ProSitePatterns PS00667 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. 51 66 - T 22-04-2016 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 SMGD1_RS08345 0f73fa01b5b02c3aa28b3ac3aaf052a8 281 SUPERFAMILY SSF56317 2 279 1.57E-79 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 SMGD1_RS08345 0f73fa01b5b02c3aa28b3ac3aaf052a8 281 Pfam PF00795 Carbon-nitrogen hydrolase 3 258 1.3E-53 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 SMGD1_RS08345 0f73fa01b5b02c3aa28b3ac3aaf052a8 281 PANTHER PTHR23088:SF11 1 281 4.0E-131 T 22-04-2016 SMGD1_RS08345 0f73fa01b5b02c3aa28b3ac3aaf052a8 281 TIGRFAM TIGR03381 agmatine_aguB: N-carbamoylputrescine amidase 2 278 9.9E-138 T 22-04-2016 IPR017755 N-carbamoylputrescine amidase GO:0006596|GO:0050126 KEGG: 00330+3.5.1.53|MetaCyc: PWY-43|UniPathway: UPA00534 SMGD1_RS08345 0f73fa01b5b02c3aa28b3ac3aaf052a8 281 PANTHER PTHR23088 1 281 4.0E-131 T 22-04-2016 SMGD1_RS08345 0f73fa01b5b02c3aa28b3ac3aaf052a8 281 Gene3D G3DSA:3.60.110.10 1 279 4.8E-93 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 SMGD1_RS10150 1720796e08b8d760c2170f1a913502fc 745 SUPERFAMILY SSF52540 26 134 1.59E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS10150 1720796e08b8d760c2170f1a913502fc 745 SUPERFAMILY SSF52540 504 622 1.59E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS10150 1720796e08b8d760c2170f1a913502fc 745 Pfam PF13166 AAA domain 34 729 6.3E-36 T 22-04-2016 IPR026866 P-loop containing protein CR006/PrrC SMGD1_RS10150 1720796e08b8d760c2170f1a913502fc 745 Gene3D G3DSA:3.40.1140.10 528 649 6.2E-8 T 22-04-2016 SMGD1_RS10150 1720796e08b8d760c2170f1a913502fc 745 Gene3D G3DSA:3.40.1140.10 31 91 6.2E-8 T 22-04-2016 SMGD1_RS08055 be6dd291c39f1f0583a3a4bed7b3abe4 280 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 11 277 4.6E-86 T 22-04-2016 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 SMGD1_RS08055 be6dd291c39f1f0583a3a4bed7b3abe4 280 SUPERFAMILY SSF161098 29 270 1.44E-30 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMGD1_RS08055 be6dd291c39f1f0583a3a4bed7b3abe4 280 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 273 1.7E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMGD1_RS08055 be6dd291c39f1f0583a3a4bed7b3abe4 280 PANTHER PTHR30425:SF0 4 278 1.6E-112 T 22-04-2016 SMGD1_RS08055 be6dd291c39f1f0583a3a4bed7b3abe4 280 Gene3D G3DSA:1.10.3720.10 61 276 4.0E-36 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMGD1_RS08055 be6dd291c39f1f0583a3a4bed7b3abe4 280 PANTHER PTHR30425 4 278 1.6E-112 T 22-04-2016 SMGD1_RS05445 d598f37ffa026e612bfbe0c329f30741 589 PANTHER PTHR24221:SF233 11 57 6.2E-206 T 22-04-2016 SMGD1_RS05445 d598f37ffa026e612bfbe0c329f30741 589 PANTHER PTHR24221:SF233 74 582 6.2E-206 T 22-04-2016 SMGD1_RS05445 d598f37ffa026e612bfbe0c329f30741 589 ProSitePatterns PS00211 ABC transporters family signature. 489 503 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMGD1_RS05445 d598f37ffa026e612bfbe0c329f30741 589 SMART SM00382 377 571 2.2E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain SMGD1_RS05445 d598f37ffa026e612bfbe0c329f30741 589 Pfam PF00664 ABC transporter transmembrane region 23 309 6.7E-20 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SMGD1_RS05445 d598f37ffa026e612bfbe0c329f30741 589 Pfam PF00005 ABC transporter 368 517 9.8E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMGD1_RS05445 d598f37ffa026e612bfbe0c329f30741 589 Gene3D G3DSA:3.40.50.300 352 581 6.0E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS05445 d598f37ffa026e612bfbe0c329f30741 589 Gene3D G3DSA:1.20.1560.10 11 333 1.5E-43 T 22-04-2016 SMGD1_RS05445 d598f37ffa026e612bfbe0c329f30741 589 SUPERFAMILY SSF52540 345 588 2.05E-81 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS05445 d598f37ffa026e612bfbe0c329f30741 589 SUPERFAMILY SSF90123 5 334 1.96E-46 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SMGD1_RS05445 d598f37ffa026e612bfbe0c329f30741 589 PANTHER PTHR24221 11 57 6.2E-206 T 22-04-2016 SMGD1_RS05445 d598f37ffa026e612bfbe0c329f30741 589 PANTHER PTHR24221 74 582 6.2E-206 T 22-04-2016 SMGD1_RS10365 55581013d6f43247f48728b5eec04a0d 169 Pfam PF08534 Redoxin 20 162 2.0E-16 T 22-04-2016 IPR013740 Redoxin GO:0016491 SMGD1_RS10365 55581013d6f43247f48728b5eec04a0d 169 SUPERFAMILY SSF52833 1 163 2.83E-35 T 22-04-2016 IPR012336 Thioredoxin-like fold SMGD1_RS10365 55581013d6f43247f48728b5eec04a0d 169 PANTHER PTHR10681 1 167 5.5E-36 T 22-04-2016 SMGD1_RS10365 55581013d6f43247f48728b5eec04a0d 169 PANTHER PTHR10681:SF81 1 167 5.5E-36 T 22-04-2016 SMGD1_RS10365 55581013d6f43247f48728b5eec04a0d 169 ProSitePatterns PS01265 Tpx family signature. 83 94 - T 22-04-2016 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 SMGD1_RS10365 55581013d6f43247f48728b5eec04a0d 169 Gene3D G3DSA:3.40.30.10 2 168 2.6E-39 T 22-04-2016 IPR012336 Thioredoxin-like fold SMGD1_RS09820 48ae4e624c08ad6c4e35d213b3b00f25 321 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 63 293 2.7E-16 T 22-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 SMGD1_RS09820 48ae4e624c08ad6c4e35d213b3b00f25 321 Gene3D G3DSA:3.40.50.2000 165 292 5.6E-20 T 22-04-2016 SMGD1_RS09820 48ae4e624c08ad6c4e35d213b3b00f25 321 SUPERFAMILY SSF53756 3 296 1.88E-53 T 22-04-2016 SMGD1_RS09820 48ae4e624c08ad6c4e35d213b3b00f25 321 PANTHER PTHR30160:SF10 3 298 1.5E-47 T 22-04-2016 SMGD1_RS09820 48ae4e624c08ad6c4e35d213b3b00f25 321 PANTHER PTHR30160 3 298 1.5E-47 T 22-04-2016 SMGD1_RS09820 48ae4e624c08ad6c4e35d213b3b00f25 321 Gene3D G3DSA:3.40.50.2000 3 136 2.3E-25 T 22-04-2016 SMGD1_RS09845 8d1c1c622d596b7521245970b7103127 368 Gene3D G3DSA:3.40.50.2000 160 344 5.5E-27 T 22-04-2016 SMGD1_RS09845 8d1c1c622d596b7521245970b7103127 368 Pfam PF13477 Glycosyl transferase 4-like 9 132 2.8E-13 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain SMGD1_RS09845 8d1c1c622d596b7521245970b7103127 368 SUPERFAMILY SSF53756 5 366 7.07E-64 T 22-04-2016 SMGD1_RS09845 8d1c1c622d596b7521245970b7103127 368 PANTHER PTHR12526 16 368 3.1E-50 T 22-04-2016 SMGD1_RS09845 8d1c1c622d596b7521245970b7103127 368 Pfam PF00534 Glycosyl transferases group 1 178 346 1.0E-38 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 SMGD1_RS01155 6a43626c97ed6aa4ac3613beafb65c38 223 SUPERFAMILY SSF52172 1 177 1.2E-28 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS01155 6a43626c97ed6aa4ac3613beafb65c38 223 SMART SM00862 149 220 2.9E-12 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMGD1_RS01155 6a43626c97ed6aa4ac3613beafb65c38 223 PANTHER PTHR26402 1 221 1.2E-43 T 22-04-2016 SMGD1_RS01155 6a43626c97ed6aa4ac3613beafb65c38 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 154 220 1.2E-12 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMGD1_RS01155 6a43626c97ed6aa4ac3613beafb65c38 223 SMART SM00448 1 112 2.6E-21 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS01155 6a43626c97ed6aa4ac3613beafb65c38 223 Pfam PF00072 Response regulator receiver domain 3 112 8.5E-20 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS01155 6a43626c97ed6aa4ac3613beafb65c38 223 Gene3D G3DSA:1.10.10.10 135 221 1.1E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMGD1_RS01155 6a43626c97ed6aa4ac3613beafb65c38 223 Gene3D G3DSA:3.40.50.2300 1 120 2.1E-27 T 22-04-2016 SMGD1_RS13040 ddeb7a7347ed286466993112cb98b384 348 PANTHER PTHR26402 265 348 4.1E-50 T 22-04-2016 SMGD1_RS13040 ddeb7a7347ed286466993112cb98b384 348 PANTHER PTHR26402 5 143 4.1E-50 T 22-04-2016 SMGD1_RS13040 ddeb7a7347ed286466993112cb98b384 348 SMART SM00471 171 309 1.5E-7 T 22-04-2016 IPR003607 HD/PDEase domain SMGD1_RS13040 ddeb7a7347ed286466993112cb98b384 348 PANTHER PTHR26402:SF495 265 348 4.1E-50 T 22-04-2016 SMGD1_RS13040 ddeb7a7347ed286466993112cb98b384 348 PANTHER PTHR26402:SF495 5 143 4.1E-50 T 22-04-2016 SMGD1_RS13040 ddeb7a7347ed286466993112cb98b384 348 Pfam PF00072 Response regulator receiver domain 7 118 8.2E-30 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS13040 ddeb7a7347ed286466993112cb98b384 348 Pfam PF13487 HD domain 228 290 2.1E-14 T 22-04-2016 SMGD1_RS13040 ddeb7a7347ed286466993112cb98b384 348 Gene3D G3DSA:1.10.3210.10 174 342 1.6E-18 T 22-04-2016 IPR006674 HD domain SMGD1_RS13040 ddeb7a7347ed286466993112cb98b384 348 Gene3D G3DSA:3.40.50.2300 4 133 5.1E-42 T 22-04-2016 SMGD1_RS13040 ddeb7a7347ed286466993112cb98b384 348 SUPERFAMILY SSF109604 153 340 3.66E-33 T 22-04-2016 SMGD1_RS13040 ddeb7a7347ed286466993112cb98b384 348 SMART SM00448 5 118 6.9E-39 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS13040 ddeb7a7347ed286466993112cb98b384 348 SUPERFAMILY SSF52172 5 138 1.32E-39 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS00165 a4aec8a12046ec7d0b95ce155c536ff5 335 PIRSF PIRSF015268 1 335 4.0E-131 T 22-04-2016 IPR011204 Virulence protein RhuM-like SMGD1_RS00165 a4aec8a12046ec7d0b95ce155c536ff5 335 PANTHER PTHR35810:SF1 1 330 1.7E-141 T 22-04-2016 SMGD1_RS00165 a4aec8a12046ec7d0b95ce155c536ff5 335 PANTHER PTHR35810 1 330 1.7E-141 T 22-04-2016 SMGD1_RS00165 a4aec8a12046ec7d0b95ce155c536ff5 335 Pfam PF13310 Virulence protein RhuM family 64 316 6.6E-108 T 22-04-2016 IPR011204 Virulence protein RhuM-like SMGD1_RS02245 b359edf054a248bab2e2237a412bb305 1085 SMART SM00851 968 1054 6.4E-29 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain SMGD1_RS02245 b359edf054a248bab2e2237a412bb305 1085 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 202 221 3.2E-63 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SMGD1_RS02245 b359edf054a248bab2e2237a412bb305 1085 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 3.2E-63 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SMGD1_RS02245 b359edf054a248bab2e2237a412bb305 1085 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 376 394 3.2E-63 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SMGD1_RS02245 b359edf054a248bab2e2237a412bb305 1085 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 295 324 3.2E-63 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SMGD1_RS02245 b359edf054a248bab2e2237a412bb305 1085 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 166 178 3.2E-63 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SMGD1_RS02245 b359edf054a248bab2e2237a412bb305 1085 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 237 254 3.2E-63 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SMGD1_RS02245 b359edf054a248bab2e2237a412bb305 1085 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 3.2E-63 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SMGD1_RS02245 b359edf054a248bab2e2237a412bb305 1085 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 672 873 1.2E-36 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SMGD1_RS02245 b359edf054a248bab2e2237a412bb305 1085 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 126 332 9.1E-69 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SMGD1_RS02245 b359edf054a248bab2e2237a412bb305 1085 Gene3D G3DSA:3.30.470.20 744 947 1.5E-71 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SMGD1_RS02245 b359edf054a248bab2e2237a412bb305 1085 Gene3D G3DSA:3.30.470.20 199 395 5.2E-73 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SMGD1_RS02245 b359edf054a248bab2e2237a412bb305 1085 PANTHER PTHR11405:SF5 1 1074 0.0 T 22-04-2016 SMGD1_RS02245 b359edf054a248bab2e2237a412bb305 1085 SUPERFAMILY SSF56059 126 397 2.65E-102 T 22-04-2016 SMGD1_RS02245 b359edf054a248bab2e2237a412bb305 1085 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 295 302 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SMGD1_RS02245 b359edf054a248bab2e2237a412bb305 1085 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 837 844 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SMGD1_RS02245 b359edf054a248bab2e2237a412bb305 1085 Pfam PF02142 MGS-like domain 970 1054 1.0E-18 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain SMGD1_RS02245 b359edf054a248bab2e2237a412bb305 1085 Gene3D G3DSA:3.30.1490.20 144 198 7.6E-20 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SMGD1_RS02245 b359edf054a248bab2e2237a412bb305 1085 Gene3D G3DSA:3.30.1490.20 685 743 1.7E-23 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SMGD1_RS02245 b359edf054a248bab2e2237a412bb305 1085 SUPERFAMILY SSF52440 556 674 7.05E-46 T 22-04-2016 IPR016185 Pre-ATP-grasp domain SMGD1_RS02245 b359edf054a248bab2e2237a412bb305 1085 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1065 0.0 T 22-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SMGD1_RS02245 b359edf054a248bab2e2237a412bb305 1085 Gene3D G3DSA:1.10.1030.10 396 532 3.5E-40 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SMGD1_RS02245 b359edf054a248bab2e2237a412bb305 1085 PANTHER PTHR11405 1 1074 0.0 T 22-04-2016 SMGD1_RS02245 b359edf054a248bab2e2237a412bb305 1085 Gene3D G3DSA:3.40.50.20 533 661 9.5E-56 T 22-04-2016 IPR016185 Pre-ATP-grasp domain SMGD1_RS02245 b359edf054a248bab2e2237a412bb305 1085 SUPERFAMILY SSF52440 1 125 3.74E-43 T 22-04-2016 IPR016185 Pre-ATP-grasp domain SMGD1_RS02245 b359edf054a248bab2e2237a412bb305 1085 Gene3D G3DSA:3.40.50.1380 950 1080 1.2E-33 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain SMGD1_RS02245 b359edf054a248bab2e2237a412bb305 1085 SMART SM01096 415 542 8.8E-53 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SMGD1_RS02245 b359edf054a248bab2e2237a412bb305 1085 SUPERFAMILY SSF56059 672 946 4.77E-98 T 22-04-2016 SMGD1_RS02245 b359edf054a248bab2e2237a412bb305 1085 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 708 722 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SMGD1_RS02245 b359edf054a248bab2e2237a412bb305 1085 SUPERFAMILY SSF52335 948 1081 2.75E-33 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain SMGD1_RS02245 b359edf054a248bab2e2237a412bb305 1085 SUPERFAMILY SSF48108 392 544 1.96E-40 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SMGD1_RS02245 b359edf054a248bab2e2237a412bb305 1085 Gene3D G3DSA:3.40.50.20 3 107 3.4E-42 T 22-04-2016 IPR016185 Pre-ATP-grasp domain SMGD1_RS02245 b359edf054a248bab2e2237a412bb305 1085 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 418 541 7.4E-36 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SMGD1_RS02245 b359edf054a248bab2e2237a412bb305 1085 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1075 12.657 T 22-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SMGD1_RS01995 5e7d5b9d3f3dad0fd9b676399fb18f92 644 SUPERFAMILY SSF58104 335 643 4.97E-55 T 22-04-2016 SMGD1_RS01995 5e7d5b9d3f3dad0fd9b676399fb18f92 644 PANTHER PTHR32089 271 644 9.9E-61 T 22-04-2016 SMGD1_RS01995 5e7d5b9d3f3dad0fd9b676399fb18f92 644 Pfam PF00672 HAMP domain 295 363 1.7E-6 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SMGD1_RS01995 5e7d5b9d3f3dad0fd9b676399fb18f92 644 SMART SM00304 314 367 9.6E-5 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SMGD1_RS01995 5e7d5b9d3f3dad0fd9b676399fb18f92 644 SMART SM00304 591 640 120.0 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SMGD1_RS01995 5e7d5b9d3f3dad0fd9b676399fb18f92 644 Gene3D G3DSA:1.10.287.950 403 569 1.3E-42 T 22-04-2016 SMGD1_RS01995 5e7d5b9d3f3dad0fd9b676399fb18f92 644 SMART SM00283 393 643 8.9E-45 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SMGD1_RS01995 5e7d5b9d3f3dad0fd9b676399fb18f92 644 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 448 642 1.7E-40 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SMGD1_RS01995 5e7d5b9d3f3dad0fd9b676399fb18f92 644 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 509 538 1.5E-20 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SMGD1_RS01995 5e7d5b9d3f3dad0fd9b676399fb18f92 644 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 480 507 1.5E-20 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SMGD1_RS01995 5e7d5b9d3f3dad0fd9b676399fb18f92 644 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 293 313 1.5E-20 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SMGD1_RS12080 a4984df937225d23cb004f34de4f992a 630 SUPERFAMILY SSF110942 513 627 4.05E-29 T 22-04-2016 SMGD1_RS12080 a4984df937225d23cb004f34de4f992a 630 Pfam PF00183 Hsp90 protein 215 630 7.6E-110 T 22-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 SMGD1_RS12080 a4984df937225d23cb004f34de4f992a 630 SMART SM00387 24 179 5.8E-9 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS12080 a4984df937225d23cb004f34de4f992a 630 Gene3D G3DSA:3.30.565.10 2 209 2.3E-80 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS12080 a4984df937225d23cb004f34de4f992a 630 SUPERFAMILY SSF54211 237 489 3.11E-85 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SMGD1_RS12080 a4984df937225d23cb004f34de4f992a 630 PANTHER PTHR11528:SF44 3 630 2.6E-258 T 22-04-2016 SMGD1_RS12080 a4984df937225d23cb004f34de4f992a 630 SUPERFAMILY SSF55874 2 209 8.91E-67 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS12080 a4984df937225d23cb004f34de4f992a 630 PANTHER PTHR11528 3 630 2.6E-258 T 22-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 SMGD1_RS12080 a4984df937225d23cb004f34de4f992a 630 PIRSF PIRSF002583 1 630 1.7E-203 T 22-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 SMGD1_RS12080 a4984df937225d23cb004f34de4f992a 630 Hamap MF_00505 Chaperone protein HtpG [htpG]. 1 627 29.358 T 22-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 SMGD1_RS12080 a4984df937225d23cb004f34de4f992a 630 PRINTS PR00775 90kDa heat shock protein signature 167 184 1.1E-59 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal SMGD1_RS12080 a4984df937225d23cb004f34de4f992a 630 PRINTS PR00775 90kDa heat shock protein signature 2 22 1.1E-59 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal SMGD1_RS12080 a4984df937225d23cb004f34de4f992a 630 PRINTS PR00775 90kDa heat shock protein signature 185 203 1.1E-59 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal SMGD1_RS12080 a4984df937225d23cb004f34de4f992a 630 PRINTS PR00775 90kDa heat shock protein signature 90 107 1.1E-59 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal SMGD1_RS12080 a4984df937225d23cb004f34de4f992a 630 PRINTS PR00775 90kDa heat shock protein signature 72 89 1.1E-59 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal SMGD1_RS12080 a4984df937225d23cb004f34de4f992a 630 PRINTS PR00775 90kDa heat shock protein signature 23 45 1.1E-59 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal SMGD1_RS12080 a4984df937225d23cb004f34de4f992a 630 PRINTS PR00775 90kDa heat shock protein signature 117 139 1.1E-59 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal SMGD1_RS12080 a4984df937225d23cb004f34de4f992a 630 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 22 150 1.1E-13 T 22-04-2016 SMGD1_RS06245 cc93e745dbbf7d755f76766a889f8947 104 PANTHER PTHR36540 2 103 1.6E-40 T 22-04-2016 SMGD1_RS06245 cc93e745dbbf7d755f76766a889f8947 104 PANTHER PTHR36540:SF1 2 103 1.6E-40 T 22-04-2016 SMGD1_RS06245 cc93e745dbbf7d755f76766a889f8947 104 SUPERFAMILY SSF51182 11 102 1.2E-32 T 22-04-2016 IPR011051 RmlC-like cupin domain SMGD1_RS06245 cc93e745dbbf7d755f76766a889f8947 104 Pfam PF06865 Protein of unknown function (DUF1255) 12 101 6.5E-36 T 22-04-2016 IPR009664 Protein of unknown function DUF1255 SMGD1_RS06245 cc93e745dbbf7d755f76766a889f8947 104 Gene3D G3DSA:2.60.120.10 10 101 3.9E-35 T 22-04-2016 IPR014710 RmlC-like jelly roll fold SMGD1_RS06245 cc93e745dbbf7d755f76766a889f8947 104 Hamap MF_01537 UPF0345 protein YaiE [yaiE]. 10 102 27.419 T 22-04-2016 IPR009664 Protein of unknown function DUF1255 SMGD1_RS08340 f5bebb98e967c8465a285a8776eed50d 92 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 30 50 - T 22-04-2016 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site SMGD1_RS08340 f5bebb98e967c8465a285a8776eed50d 92 PANTHER PTHR10657 3 91 3.1E-37 T 22-04-2016 SMGD1_RS08340 f5bebb98e967c8465a285a8776eed50d 92 SUPERFAMILY SSF54534 5 89 1.05E-28 T 22-04-2016 SMGD1_RS08340 f5bebb98e967c8465a285a8776eed50d 92 Pfam PF00639 PPIC-type PPIASE domain 13 89 9.4E-21 T 22-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 SMGD1_RS08340 f5bebb98e967c8465a285a8776eed50d 92 Gene3D G3DSA:3.10.50.40 3 91 4.3E-33 T 22-04-2016 SMGD1_RS10970 652a33edcfcbc6cb83651408292bfe8b 160 Pfam PF01220 Dehydroquinase class II 2 136 2.5E-55 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 SMGD1_RS10970 652a33edcfcbc6cb83651408292bfe8b 160 ProSitePatterns PS01029 Dehydroquinase class II signature. 6 23 - T 22-04-2016 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 SMGD1_RS10970 652a33edcfcbc6cb83651408292bfe8b 160 PIRSF PIRSF001399 1 145 3.8E-58 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 SMGD1_RS10970 652a33edcfcbc6cb83651408292bfe8b 160 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 3 139 4.0E-60 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 SMGD1_RS10970 652a33edcfcbc6cb83651408292bfe8b 160 SUPERFAMILY SSF52304 1 151 6.28E-58 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 SMGD1_RS10970 652a33edcfcbc6cb83651408292bfe8b 160 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 160 64.797 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 SMGD1_RS10970 652a33edcfcbc6cb83651408292bfe8b 160 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 2 141 9.8E-64 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 SMGD1_RS10970 652a33edcfcbc6cb83651408292bfe8b 160 Gene3D G3DSA:3.40.50.9100 1 144 8.6E-60 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 SMGD1_RS10970 652a33edcfcbc6cb83651408292bfe8b 160 PANTHER PTHR21272 1 148 4.6E-71 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 SMGD1_RS08785 c7f91426070e4e6e545c988ac6b88eb5 333 Gene3D G3DSA:3.40.47.10 4 162 1.5E-64 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SMGD1_RS08785 c7f91426070e4e6e545c988ac6b88eb5 333 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 4 327 1.3E-133 T 22-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 SMGD1_RS08785 c7f91426070e4e6e545c988ac6b88eb5 333 PANTHER PTHR34069 1 333 2.9E-122 T 22-04-2016 SMGD1_RS08785 c7f91426070e4e6e545c988ac6b88eb5 333 PANTHER PTHR34069:SF2 1 333 2.9E-122 T 22-04-2016 SMGD1_RS08785 c7f91426070e4e6e545c988ac6b88eb5 333 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 108 187 2.0E-30 T 22-04-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 SMGD1_RS08785 c7f91426070e4e6e545c988ac6b88eb5 333 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 2 328 68.735 T 22-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 SMGD1_RS08785 c7f91426070e4e6e545c988ac6b88eb5 333 SUPERFAMILY SSF53901 6 326 1.82E-63 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SMGD1_RS08785 c7f91426070e4e6e545c988ac6b88eb5 333 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 239 326 1.3E-31 T 22-04-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 SMGD1_RS08785 c7f91426070e4e6e545c988ac6b88eb5 333 Gene3D G3DSA:3.40.47.10 163 326 9.7E-49 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SMGD1_RS06485 f2dbef318ae53e07d7e97e87669dd2a5 308 PANTHER PTHR30600 20 305 5.1E-96 T 22-04-2016 SMGD1_RS06485 f2dbef318ae53e07d7e97e87669dd2a5 308 PIRSF PIRSF000294 11 305 7.9E-100 T 22-04-2016 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 SMGD1_RS06485 f2dbef318ae53e07d7e97e87669dd2a5 308 SUPERFAMILY SSF46626 164 300 3.85E-37 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS06485 f2dbef318ae53e07d7e97e87669dd2a5 308 Gene3D G3DSA:1.10.760.10 24 169 1.0E-43 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS06485 f2dbef318ae53e07d7e97e87669dd2a5 308 Pfam PF03150 Di-haem cytochrome c peroxidase 32 177 1.5E-43 T 22-04-2016 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 SMGD1_RS06485 f2dbef318ae53e07d7e97e87669dd2a5 308 Pfam PF00034 Cytochrome c 185 295 3.7E-7 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS06485 f2dbef318ae53e07d7e97e87669dd2a5 308 Gene3D G3DSA:1.10.760.10 170 300 4.4E-45 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS06485 f2dbef318ae53e07d7e97e87669dd2a5 308 PANTHER PTHR30600:SF7 20 305 5.1E-96 T 22-04-2016 SMGD1_RS06485 f2dbef318ae53e07d7e97e87669dd2a5 308 SUPERFAMILY SSF46626 9 165 3.08E-41 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS08735 f1d5579c2ca457617fb1a8179ccafadc 415 SUPERFAMILY SSF52172 122 247 1.99E-35 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS08735 f1d5579c2ca457617fb1a8179ccafadc 415 SUPERFAMILY SSF55073 259 414 2.12E-46 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS08735 f1d5579c2ca457617fb1a8179ccafadc 415 Gene3D G3DSA:3.30.70.270 256 414 2.6E-51 T 22-04-2016 SMGD1_RS08735 f1d5579c2ca457617fb1a8179ccafadc 415 SMART SM00267 240 415 4.0E-52 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS08735 f1d5579c2ca457617fb1a8179ccafadc 415 PANTHER PTHR26402 123 233 6.8E-36 T 22-04-2016 SMGD1_RS08735 f1d5579c2ca457617fb1a8179ccafadc 415 Pfam PF00072 Response regulator receiver domain 125 236 7.7E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS08735 f1d5579c2ca457617fb1a8179ccafadc 415 Pfam PF00072 Response regulator receiver domain 4 102 3.7E-9 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS08735 f1d5579c2ca457617fb1a8179ccafadc 415 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 252 413 1.5E-50 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS08735 f1d5579c2ca457617fb1a8179ccafadc 415 Gene3D G3DSA:3.40.50.2300 1 117 1.4E-14 T 22-04-2016 SMGD1_RS08735 f1d5579c2ca457617fb1a8179ccafadc 415 Gene3D G3DSA:3.40.50.2300 120 242 1.1E-36 T 22-04-2016 SMGD1_RS08735 f1d5579c2ca457617fb1a8179ccafadc 415 SUPERFAMILY SSF52172 1 118 8.68E-15 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS08735 f1d5579c2ca457617fb1a8179ccafadc 415 Pfam PF00990 Diguanylate cyclase, GGDEF domain 254 411 1.1E-47 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS08735 f1d5579c2ca457617fb1a8179ccafadc 415 SMART SM00448 123 237 2.6E-33 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS08735 f1d5579c2ca457617fb1a8179ccafadc 415 SMART SM00448 2 114 9.8E-7 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS05735 43056c6824b7daf9a6d3ce6b1b5c4a54 324 Pfam PF04324 BFD-like [2Fe-2S] binding domain 159 201 9.3E-11 T 22-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain SMGD1_RS05735 43056c6824b7daf9a6d3ce6b1b5c4a54 324 Pfam PF01106 NifU-like domain 252 321 1.6E-19 T 22-04-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 SMGD1_RS05735 43056c6824b7daf9a6d3ce6b1b5c4a54 324 Gene3D G3DSA:3.90.1010.10 14 153 1.4E-33 T 22-04-2016 SMGD1_RS05735 43056c6824b7daf9a6d3ce6b1b5c4a54 324 PANTHER PTHR10093:SF1 6 205 6.8E-79 T 22-04-2016 SMGD1_RS05735 43056c6824b7daf9a6d3ce6b1b5c4a54 324 PIRSF PIRSF000375 12 324 7.5E-108 T 22-04-2016 IPR016217 Nitrogen fixation, NifU SMGD1_RS05735 43056c6824b7daf9a6d3ce6b1b5c4a54 324 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 258 321 3.0E-26 T 22-04-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 SMGD1_RS05735 43056c6824b7daf9a6d3ce6b1b5c4a54 324 Pfam PF01592 NifU-like N terminal domain 14 148 3.8E-44 T 22-04-2016 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 SMGD1_RS05735 43056c6824b7daf9a6d3ce6b1b5c4a54 324 SUPERFAMILY SSF117916 241 323 2.05E-17 T 22-04-2016 SMGD1_RS05735 43056c6824b7daf9a6d3ce6b1b5c4a54 324 PANTHER PTHR10093 6 205 6.8E-79 T 22-04-2016 SMGD1_RS05735 43056c6824b7daf9a6d3ce6b1b5c4a54 324 SUPERFAMILY SSF82649 14 157 1.1E-34 T 22-04-2016 SMGD1_RS02360 79301fbc04bdc66985812288846a63ae 309 PANTHER PTHR10859 2 296 2.6E-74 T 22-04-2016 SMGD1_RS02360 79301fbc04bdc66985812288846a63ae 309 PANTHER PTHR10859:SF95 2 296 2.6E-74 T 22-04-2016 SMGD1_RS02360 79301fbc04bdc66985812288846a63ae 309 SUPERFAMILY SSF53448 3 257 3.68E-32 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMGD1_RS02360 79301fbc04bdc66985812288846a63ae 309 Pfam PF00535 Glycosyl transferase family 2 7 162 4.8E-20 T 22-04-2016 IPR001173 Glycosyltransferase 2-like SMGD1_RS02360 79301fbc04bdc66985812288846a63ae 309 Gene3D G3DSA:3.90.550.10 2 165 2.4E-15 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMGD1_RS11305 25958573a4457dae8aa2afd97051dba9 76 Pfam PF09905 Uncharacterized conserved protein (DUF2132) 8 70 1.6E-34 T 22-04-2016 IPR018668 DNA-binding protein VF530-like, bacteria GO:0003677 SMGD1_RS11305 25958573a4457dae8aa2afd97051dba9 76 Gene3D G3DSA:1.10.720.30 16 74 4.4E-31 T 22-04-2016 IPR003034 SAP domain SMGD1_RS04345 bfb95e06a6e8a015e0bf22cb243e53b2 277 Pfam PF03631 Virulence factor BrkB 24 267 7.0E-42 T 22-04-2016 IPR017039 Virulence factor BrkB SMGD1_RS04345 bfb95e06a6e8a015e0bf22cb243e53b2 277 PIRSF PIRSF035875 1 277 9.3E-46 T 22-04-2016 IPR017039 Virulence factor BrkB SMGD1_RS04345 bfb95e06a6e8a015e0bf22cb243e53b2 277 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 15 266 7.7E-54 T 22-04-2016 IPR017039 Virulence factor BrkB SMGD1_RS04345 bfb95e06a6e8a015e0bf22cb243e53b2 277 PANTHER PTHR30213 1 277 3.6E-46 T 22-04-2016 SMGD1_RS04345 bfb95e06a6e8a015e0bf22cb243e53b2 277 PANTHER PTHR30213:SF0 1 277 3.6E-46 T 22-04-2016 SMGD1_RS00385 c72d724f5c05300a8a977d23eff06d5a 260 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 260 94.782 T 22-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 SMGD1_RS00385 c72d724f5c05300a8a977d23eff06d5a 260 SUPERFAMILY SSF63892 1 258 1.11E-82 T 22-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 SMGD1_RS00385 c72d724f5c05300a8a977d23eff06d5a 260 PANTHER PTHR30456:SF0 1 160 4.8E-91 T 22-04-2016 SMGD1_RS00385 c72d724f5c05300a8a977d23eff06d5a 260 PANTHER PTHR30456:SF0 189 257 4.8E-91 T 22-04-2016 SMGD1_RS00385 c72d724f5c05300a8a977d23eff06d5a 260 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 2 258 2.4E-85 T 22-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 SMGD1_RS00385 c72d724f5c05300a8a977d23eff06d5a 260 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 2 257 2.6E-91 T 22-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 SMGD1_RS00385 c72d724f5c05300a8a977d23eff06d5a 260 PANTHER PTHR30456 1 160 4.8E-91 T 22-04-2016 SMGD1_RS00385 c72d724f5c05300a8a977d23eff06d5a 260 PANTHER PTHR30456 189 257 4.8E-91 T 22-04-2016 SMGD1_RS00385 c72d724f5c05300a8a977d23eff06d5a 260 Gene3D G3DSA:3.20.20.70 1 258 1.1E-93 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMGD1_RS13725 bd23c399455bc4f677aac0915d58f973 430 Pfam PF00202 Aminotransferase class-III 34 416 4.4E-73 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SMGD1_RS13725 bd23c399455bc4f677aac0915d58f973 430 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 5 427 98.999 T 22-04-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188|UniPathway: UPA00251 SMGD1_RS13725 bd23c399455bc4f677aac0915d58f973 430 Gene3D G3DSA:3.40.640.10 73 317 9.6E-78 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SMGD1_RS13725 bd23c399455bc4f677aac0915d58f973 430 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 6 426 9.1E-183 T 22-04-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188|UniPathway: UPA00251 SMGD1_RS13725 bd23c399455bc4f677aac0915d58f973 430 PANTHER PTHR11986 1 429 3.2E-200 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SMGD1_RS13725 bd23c399455bc4f677aac0915d58f973 430 PANTHER PTHR11986:SF5 1 429 3.2E-200 T 22-04-2016 SMGD1_RS13725 bd23c399455bc4f677aac0915d58f973 430 Gene3D G3DSA:3.90.1150.10 2 71 4.0E-38 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SMGD1_RS13725 bd23c399455bc4f677aac0915d58f973 430 Gene3D G3DSA:3.90.1150.10 321 426 4.0E-38 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SMGD1_RS13725 bd23c399455bc4f677aac0915d58f973 430 SUPERFAMILY SSF53383 2 425 9.32E-122 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SMGD1_RS13725 bd23c399455bc4f677aac0915d58f973 430 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 235 271 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SMGD1_RS08120 336a73275c4a02a9ef8956d6883a8980 452 Pfam PF13847 Methyltransferase domain 65 217 1.0E-26 T 22-04-2016 IPR025714 Methyltransferase domain SMGD1_RS08120 336a73275c4a02a9ef8956d6883a8980 452 PANTHER PTHR10108:SF924 66 176 5.7E-30 T 22-04-2016 SMGD1_RS08120 336a73275c4a02a9ef8956d6883a8980 452 Pfam PF08241 Methyltransferase domain 295 391 4.5E-8 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 SMGD1_RS08120 336a73275c4a02a9ef8956d6883a8980 452 SUPERFAMILY SSF53335 40 227 2.89E-34 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS08120 336a73275c4a02a9ef8956d6883a8980 452 Gene3D G3DSA:3.40.50.150 254 451 1.5E-18 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS08120 336a73275c4a02a9ef8956d6883a8980 452 SUPERFAMILY SSF53335 253 434 1.48E-20 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS08120 336a73275c4a02a9ef8956d6883a8980 452 PANTHER PTHR10108 66 176 5.7E-30 T 22-04-2016 SMGD1_RS08120 336a73275c4a02a9ef8956d6883a8980 452 Gene3D G3DSA:3.40.50.150 39 247 3.6E-38 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS11200 a4f09927868b34239140ad91aa017e53 583 SUPERFAMILY SSF56762 4 563 7.72E-167 T 22-04-2016 IPR029014 NiFe hydrogenase-like SMGD1_RS11200 a4f09927868b34239140ad91aa017e53 583 ProSitePatterns PS00507 Nickel-dependent hydrogenases large subunit signature 1. 41 66 - T 22-04-2016 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 SMGD1_RS11200 a4f09927868b34239140ad91aa017e53 583 PANTHER PTHR11993 189 253 1.7E-169 T 22-04-2016 SMGD1_RS11200 a4f09927868b34239140ad91aa017e53 583 PANTHER PTHR11993 359 570 1.7E-169 T 22-04-2016 SMGD1_RS11200 a4f09927868b34239140ad91aa017e53 583 PANTHER PTHR11993 1 118 1.7E-169 T 22-04-2016 SMGD1_RS11200 a4f09927868b34239140ad91aa017e53 583 Gene3D G3DSA:1.10.645.10 2 563 1.5E-210 T 22-04-2016 IPR029014 NiFe hydrogenase-like SMGD1_RS11200 a4f09927868b34239140ad91aa017e53 583 ProSitePatterns PS00508 Nickel-dependent hydrogenases large subunit signature 2. 554 563 - T 22-04-2016 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 SMGD1_RS11200 a4f09927868b34239140ad91aa017e53 583 PANTHER PTHR11993:SF11 189 253 1.7E-169 T 22-04-2016 SMGD1_RS11200 a4f09927868b34239140ad91aa017e53 583 PANTHER PTHR11993:SF11 359 570 1.7E-169 T 22-04-2016 SMGD1_RS11200 a4f09927868b34239140ad91aa017e53 583 PANTHER PTHR11993:SF11 1 118 1.7E-169 T 22-04-2016 SMGD1_RS11200 a4f09927868b34239140ad91aa017e53 583 Pfam PF00374 Nickel-dependent hydrogenase 41 563 1.1E-223 T 22-04-2016 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 SMGD1_RS12580 326ea9a3855f83e41dc91cd2d007dea1 352 Gene3D G3DSA:3.20.20.70 3 350 2.5E-111 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMGD1_RS12580 326ea9a3855f83e41dc91cd2d007dea1 352 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 287 307 - T 22-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 SMGD1_RS12580 326ea9a3855f83e41dc91cd2d007dea1 352 PIRSF PIRSF000164 19 352 1.7E-95 T 22-04-2016 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 Reactome: REACT_1698 SMGD1_RS12580 326ea9a3855f83e41dc91cd2d007dea1 352 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 6 352 1.6E-124 T 22-04-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|UniPathway: UPA00070 SMGD1_RS12580 326ea9a3855f83e41dc91cd2d007dea1 352 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 86 105 - T 22-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 SMGD1_RS12580 326ea9a3855f83e41dc91cd2d007dea1 352 Pfam PF01180 Dihydroorotate dehydrogenase 51 334 1.4E-77 T 22-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 SMGD1_RS12580 326ea9a3855f83e41dc91cd2d007dea1 352 SUPERFAMILY SSF51395 4 350 5.5E-93 T 22-04-2016 SMGD1_RS12580 326ea9a3855f83e41dc91cd2d007dea1 352 PANTHER PTHR11938:SF47 1 350 2.4E-64 T 22-04-2016 SMGD1_RS12580 326ea9a3855f83e41dc91cd2d007dea1 352 PANTHER PTHR11938 1 350 2.4E-64 T 22-04-2016 SMGD1_RS12580 326ea9a3855f83e41dc91cd2d007dea1 352 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 3 331 40.989 T 22-04-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|UniPathway: UPA00070 SMGD1_RS00030 2820c947d52aaccab18dc8b0a8684250 318 Gene3D G3DSA:3.40.50.1400 5 197 2.1E-55 T 22-04-2016 SMGD1_RS00030 2820c947d52aaccab18dc8b0a8684250 318 Pfam PF00762 Ferrochelatase 5 316 1.3E-93 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 SMGD1_RS00030 2820c947d52aaccab18dc8b0a8684250 318 TIGRFAM TIGR00109 hemH: ferrochelatase 3 316 7.3E-90 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 SMGD1_RS00030 2820c947d52aaccab18dc8b0a8684250 318 Gene3D G3DSA:3.40.50.1400 198 313 5.4E-31 T 22-04-2016 SMGD1_RS00030 2820c947d52aaccab18dc8b0a8684250 318 ProSitePatterns PS00534 Ferrochelatase signature. 187 205 - T 22-04-2016 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 SMGD1_RS00030 2820c947d52aaccab18dc8b0a8684250 318 PANTHER PTHR11108 5 313 1.6E-83 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 SMGD1_RS00030 2820c947d52aaccab18dc8b0a8684250 318 PANTHER PTHR11108:SF1 5 313 1.6E-83 T 22-04-2016 SMGD1_RS00030 2820c947d52aaccab18dc8b0a8684250 318 Hamap MF_00323 Ferrochelatase [hemH]. 4 318 32.076 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 SMGD1_RS00030 2820c947d52aaccab18dc8b0a8684250 318 SUPERFAMILY SSF53800 4 316 1.96E-83 T 22-04-2016 SMGD1_RS00710 3033f4de69de80987f4bb54347a79c68 333 Gene3D G3DSA:3.40.50.720 157 311 8.5E-16 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS00710 3033f4de69de80987f4bb54347a79c68 333 SUPERFAMILY SSF51735 31 327 1.51E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS00710 3033f4de69de80987f4bb54347a79c68 333 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 33 328 6.4E-24 T 22-04-2016 IPR003462 Ornithine cyclodeaminase/mu-crystallin SMGD1_RS00710 3033f4de69de80987f4bb54347a79c68 333 Gene3D G3DSA:3.30.1780.10 24 156 6.3E-16 T 22-04-2016 IPR023401 Ornithine cyclodeaminase, N-terminal SMGD1_RS07105 644c41d635c8757e796fe02216b33429 403 PANTHER PTHR30600 62 101 1.6E-60 T 22-04-2016 SMGD1_RS07105 644c41d635c8757e796fe02216b33429 403 PANTHER PTHR30600 326 398 1.6E-60 T 22-04-2016 SMGD1_RS07105 644c41d635c8757e796fe02216b33429 403 PANTHER PTHR30600 133 297 1.6E-60 T 22-04-2016 SMGD1_RS07105 644c41d635c8757e796fe02216b33429 403 Gene3D G3DSA:3.90.10.10 95 121 2.6E-5 T 22-04-2016 SMGD1_RS07105 644c41d635c8757e796fe02216b33429 403 SUPERFAMILY SSF46626 114 232 4.71E-24 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS07105 644c41d635c8757e796fe02216b33429 403 Pfam PF03150 Di-haem cytochrome c peroxidase 115 244 1.9E-24 T 22-04-2016 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 SMGD1_RS07105 644c41d635c8757e796fe02216b33429 403 Pfam PF03150 Di-haem cytochrome c peroxidase 68 104 5.8E-9 T 22-04-2016 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 SMGD1_RS07105 644c41d635c8757e796fe02216b33429 403 PANTHER PTHR30600:SF7 62 101 1.6E-60 T 22-04-2016 SMGD1_RS07105 644c41d635c8757e796fe02216b33429 403 PANTHER PTHR30600:SF7 326 398 1.6E-60 T 22-04-2016 SMGD1_RS07105 644c41d635c8757e796fe02216b33429 403 PANTHER PTHR30600:SF7 133 297 1.6E-60 T 22-04-2016 SMGD1_RS07105 644c41d635c8757e796fe02216b33429 403 Pfam PF00034 Cytochrome c 251 388 2.2E-5 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS07105 644c41d635c8757e796fe02216b33429 403 Gene3D G3DSA:1.10.760.10 237 395 2.2E-32 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS07105 644c41d635c8757e796fe02216b33429 403 SUPERFAMILY SSF46626 57 103 9.65E-10 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS07105 644c41d635c8757e796fe02216b33429 403 Gene3D G3DSA:1.10.760.10 122 236 1.9E-28 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS07105 644c41d635c8757e796fe02216b33429 403 Gene3D G3DSA:1.10.760.10 61 94 4.9E-9 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS07105 644c41d635c8757e796fe02216b33429 403 SUPERFAMILY SSF46626 233 393 1.77E-26 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS11415 f531ffff5ce0ada6b52763163e71f4b4 129 Pfam PF02472 Biopolymer transport protein ExbD/TolR 6 127 1.6E-23 T 22-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 SMGD1_RS11415 f531ffff5ce0ada6b52763163e71f4b4 129 PANTHER PTHR30558 1 127 2.3E-21 T 22-04-2016 SMGD1_RS12575 dede0692bdc7a770181af9d7cad930c6 418 SUPERFAMILY SSF63411 235 417 7.97E-38 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 SMGD1_RS12575 dede0692bdc7a770181af9d7cad930c6 418 Pfam PF00675 Insulinase (Peptidase family M16) 27 135 1.3E-24 T 22-04-2016 IPR011765 Peptidase M16, N-terminal SMGD1_RS12575 dede0692bdc7a770181af9d7cad930c6 418 PANTHER PTHR11851:SF136 12 418 2.3E-107 T 22-04-2016 SMGD1_RS12575 dede0692bdc7a770181af9d7cad930c6 418 Gene3D G3DSA:3.30.830.10 5 224 2.5E-57 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 SMGD1_RS12575 dede0692bdc7a770181af9d7cad930c6 418 Pfam PF05193 Peptidase M16 inactive domain 174 349 6.2E-38 T 22-04-2016 IPR007863 Peptidase M16, C-terminal SMGD1_RS12575 dede0692bdc7a770181af9d7cad930c6 418 PANTHER PTHR11851 12 418 2.3E-107 T 22-04-2016 SMGD1_RS12575 dede0692bdc7a770181af9d7cad930c6 418 Gene3D G3DSA:3.30.830.10 237 406 1.7E-33 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 SMGD1_RS12575 dede0692bdc7a770181af9d7cad930c6 418 SUPERFAMILY SSF63411 5 213 4.33E-59 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 SMGD1_RS12575 dede0692bdc7a770181af9d7cad930c6 418 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 40 63 - T 22-04-2016 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 SMGD1_RS00820 432c964a8717b5021800a2fc7849ce94 296 SUPERFAMILY SSF53335 80 256 1.74E-26 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS00820 432c964a8717b5021800a2fc7849ce94 296 Gene3D G3DSA:3.40.50.150 86 248 8.3E-22 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS00820 432c964a8717b5021800a2fc7849ce94 296 TIGRFAM TIGR00452 TIGR00452: tRNA (mo5U34)-methyltransferase 11 289 2.2E-93 T 22-04-2016 IPR010017 tRNA (mo5U34)-methyltransferase GO:0002098|GO:0016300 SMGD1_RS00820 432c964a8717b5021800a2fc7849ce94 296 PANTHER PTHR10108:SF847 50 295 3.6E-51 T 22-04-2016 SMGD1_RS00820 432c964a8717b5021800a2fc7849ce94 296 PANTHER PTHR10108 50 295 3.6E-51 T 22-04-2016 SMGD1_RS00820 432c964a8717b5021800a2fc7849ce94 296 Pfam PF08003 Protein of unknown function (DUF1698) 22 289 1.0E-86 T 22-04-2016 IPR027555 tRNA (mo5U34)-methyltransferase-like SMGD1_RS00820 432c964a8717b5021800a2fc7849ce94 296 Hamap MF_01590 tRNA (mo5U34)-methyltransferase [cmoB]. 1 293 47.442 T 22-04-2016 IPR010017 tRNA (mo5U34)-methyltransferase GO:0002098|GO:0016300 SMGD1_RS00285 c0ba76c2ea976629997a0f34574d9c46 410 SUPERFAMILY SSF56935 217 353 2.02E-8 T 22-04-2016 SMGD1_RS00285 c0ba76c2ea976629997a0f34574d9c46 410 SUPERFAMILY SSF56935 38 186 2.02E-8 T 22-04-2016 SMGD1_RS00285 c0ba76c2ea976629997a0f34574d9c46 410 Pfam PF13609 Gram-negative porin 13 344 2.5E-8 T 22-04-2016 SMGD1_RS00285 c0ba76c2ea976629997a0f34574d9c46 410 Gene3D G3DSA:2.40.160.10 32 352 1.5E-9 T 22-04-2016 IPR023614 Porin domain SMGD1_RS14275 496492a86c2e6730a62ee7f6aa3d478f 225 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 3 223 36.034 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 SMGD1_RS14275 496492a86c2e6730a62ee7f6aa3d478f 225 Gene3D G3DSA:3.40.1180.10 5 224 7.2E-76 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 SMGD1_RS14275 496492a86c2e6730a62ee7f6aa3d478f 225 Pfam PF01255 Putative undecaprenyl diphosphate synthase 10 222 4.0E-71 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 SMGD1_RS14275 496492a86c2e6730a62ee7f6aa3d478f 225 SUPERFAMILY SSF64005 5 217 3.66E-71 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 SMGD1_RS14275 496492a86c2e6730a62ee7f6aa3d478f 225 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 5 222 3.5E-77 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 SMGD1_RS14275 496492a86c2e6730a62ee7f6aa3d478f 225 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 168 185 - T 22-04-2016 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 SMGD1_RS14275 496492a86c2e6730a62ee7f6aa3d478f 225 PANTHER PTHR10291 5 225 1.2E-90 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 SMGD1_RS09180 518cb90dcf57536d339e4bd6fd9af54c 331 SUPERFAMILY SSF53756 6 331 1.26E-60 T 22-04-2016 SMGD1_RS09180 518cb90dcf57536d339e4bd6fd9af54c 331 Gene3D G3DSA:3.40.50.2000 175 331 7.3E-31 T 22-04-2016 SMGD1_RS09180 518cb90dcf57536d339e4bd6fd9af54c 331 PANTHER PTHR30160 7 282 7.8E-35 T 22-04-2016 SMGD1_RS09180 518cb90dcf57536d339e4bd6fd9af54c 331 Gene3D G3DSA:3.40.50.2000 6 155 2.3E-25 T 22-04-2016 SMGD1_RS09180 518cb90dcf57536d339e4bd6fd9af54c 331 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 88 287 3.2E-43 T 22-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 SMGD1_RS09180 518cb90dcf57536d339e4bd6fd9af54c 331 TIGRFAM TIGR02193 heptsyl_trn_I: lipopolysaccharide heptosyltransferase I 7 329 7.4E-78 T 22-04-2016 IPR011908 Lipopolysaccharide heptosyltransferase I GO:0008920|GO:0009244 KEGG: 00231+2.-.-.-|UniPathway: UPA00958 SMGD1_RS09180 518cb90dcf57536d339e4bd6fd9af54c 331 PANTHER PTHR30160:SF8 7 282 7.8E-35 T 22-04-2016 SMGD1_RS11960 543eed65d24b7aba79fdc1b5a2e96f39 263 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 1 259 28.098 T 22-04-2016 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 SMGD1_RS11960 543eed65d24b7aba79fdc1b5a2e96f39 263 Gene3D G3DSA:3.40.192.10 1 103 6.8E-36 T 22-04-2016 SMGD1_RS11960 543eed65d24b7aba79fdc1b5a2e96f39 263 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 6 86 1.2E-22 T 22-04-2016 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 SMGD1_RS11960 543eed65d24b7aba79fdc1b5a2e96f39 263 SUPERFAMILY SSF51735 99 257 4.24E-27 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS11960 543eed65d24b7aba79fdc1b5a2e96f39 263 PANTHER PTHR21089 1 260 7.2E-65 T 22-04-2016 SMGD1_RS11960 543eed65d24b7aba79fdc1b5a2e96f39 263 SUPERFAMILY SSF53223 1 98 1.15E-30 T 22-04-2016 SMGD1_RS11960 543eed65d24b7aba79fdc1b5a2e96f39 263 Gene3D G3DSA:3.40.50.720 104 259 1.5E-33 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS11960 543eed65d24b7aba79fdc1b5a2e96f39 263 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 2 261 6.8E-69 T 22-04-2016 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 SMGD1_RS05360 b39d78722d6a8e83c509a93dbc3dc984 486 Gene3D G3DSA:3.30.450.20 159 283 1.0E-10 T 22-04-2016 SMGD1_RS05360 b39d78722d6a8e83c509a93dbc3dc984 486 SMART SM00267 306 477 9.8E-57 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS05360 b39d78722d6a8e83c509a93dbc3dc984 486 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 313 477 3.0E-48 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS05360 b39d78722d6a8e83c509a93dbc3dc984 486 SUPERFAMILY SSF55073 322 476 7.85E-47 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS05360 b39d78722d6a8e83c509a93dbc3dc984 486 Pfam PF02743 Cache domain 67 270 2.6E-17 T 22-04-2016 IPR033479 Double Cache domain 1 SMGD1_RS05360 b39d78722d6a8e83c509a93dbc3dc984 486 PANTHER PTHR10799:SF750 350 476 2.4E-23 T 22-04-2016 SMGD1_RS05360 b39d78722d6a8e83c509a93dbc3dc984 486 Pfam PF00990 Diguanylate cyclase, GGDEF domain 317 473 1.9E-46 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS05360 b39d78722d6a8e83c509a93dbc3dc984 486 PANTHER PTHR10799 350 476 2.4E-23 T 22-04-2016 SMGD1_RS05360 b39d78722d6a8e83c509a93dbc3dc984 486 Gene3D G3DSA:3.30.70.270 319 482 1.6E-52 T 22-04-2016 SMGD1_RS00880 e64b3b398abcaddafb5f09c369ad080e 116 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 1 114 1.1E-26 T 22-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 SMGD1_RS00880 e64b3b398abcaddafb5f09c369ad080e 116 SUPERFAMILY SSF56214 2 113 7.85E-25 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 SMGD1_RS00880 e64b3b398abcaddafb5f09c369ad080e 116 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 5 114 2.0E-38 T 22-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 SMGD1_RS00880 e64b3b398abcaddafb5f09c369ad080e 116 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 1 114 2.2E-36 T 22-04-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 SMGD1_RS00880 e64b3b398abcaddafb5f09c369ad080e 116 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 1 115 17.927 T 22-04-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 SMGD1_RS00880 e64b3b398abcaddafb5f09c369ad080e 116 Gene3D G3DSA:3.90.470.20 2 113 2.7E-28 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 SMGD1_RS00880 e64b3b398abcaddafb5f09c369ad080e 116 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 1 111 5.8E-18 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 SMGD1_RS02430 c5ba91418f53f6f67f4fc40b7e5d7df1 187 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 5 177 1.6E-63 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 SMGD1_RS02430 c5ba91418f53f6f67f4fc40b7e5d7df1 187 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 178 1.0E-49 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 SMGD1_RS02430 c5ba91418f53f6f67f4fc40b7e5d7df1 187 SUPERFAMILY SSF51182 1 185 8.9E-65 T 22-04-2016 IPR011051 RmlC-like cupin domain SMGD1_RS02430 c5ba91418f53f6f67f4fc40b7e5d7df1 187 PANTHER PTHR21047 1 187 1.0E-59 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 SMGD1_RS02430 c5ba91418f53f6f67f4fc40b7e5d7df1 187 Gene3D G3DSA:2.60.120.10 1 185 3.4E-69 T 22-04-2016 IPR014710 RmlC-like jelly roll fold SMGD1_RS02430 c5ba91418f53f6f67f4fc40b7e5d7df1 187 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 3 179 4.8E-62 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 SMGD1_RS06315 d9e3e9fd5e4cff3c9ccbda8a89b380a5 324 PANTHER PTHR10794 1 324 2.4E-66 T 22-04-2016 SMGD1_RS06315 d9e3e9fd5e4cff3c9ccbda8a89b380a5 324 SUPERFAMILY SSF53474 222 301 2.54E-38 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SMGD1_RS06315 d9e3e9fd5e4cff3c9ccbda8a89b380a5 324 SUPERFAMILY SSF53474 25 187 2.54E-38 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SMGD1_RS06315 d9e3e9fd5e4cff3c9ccbda8a89b380a5 324 PANTHER PTHR10794:SF46 1 324 2.4E-66 T 22-04-2016 SMGD1_RS06315 d9e3e9fd5e4cff3c9ccbda8a89b380a5 324 Gene3D G3DSA:3.40.50.1820 41 322 2.1E-32 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SMGD1_RS06315 d9e3e9fd5e4cff3c9ccbda8a89b380a5 324 PIRSF PIRSF005211 1 324 7.0E-105 T 22-04-2016 IPR012020 AB hydrolase 4 family KEGG: 00051+3.1.1.-|KEGG: 00053+3.1.1.-|KEGG: 00363+3.1.1.-|KEGG: 00365+3.1.1.-|KEGG: 00534+3.1.1.-|KEGG: 00564+3.1.1.-|KEGG: 00623+3.1.1.-|KEGG: 00640+3.1.1.-|KEGG: 00830+3.1.1.-|KEGG: 00900+3.1.1.-|KEGG: 00940+3.1.1.-|KEGG: 00960+3.1.1.- SMGD1_RS06315 d9e3e9fd5e4cff3c9ccbda8a89b380a5 324 Pfam PF00561 alpha/beta hydrolase fold 60 303 4.8E-19 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SMGD1_RS01535 bffd65fd6888fd1a5e8ecbd23c33a488 230 PANTHER PTHR26402 12 216 5.1E-32 T 22-04-2016 SMGD1_RS01535 bffd65fd6888fd1a5e8ecbd23c33a488 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 224 7.6E-8 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMGD1_RS01535 bffd65fd6888fd1a5e8ecbd23c33a488 230 Gene3D G3DSA:3.40.50.2300 10 158 1.1E-27 T 22-04-2016 SMGD1_RS01535 bffd65fd6888fd1a5e8ecbd23c33a488 230 SMART SM00862 157 227 5.1E-8 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMGD1_RS01535 bffd65fd6888fd1a5e8ecbd23c33a488 230 SMART SM00448 12 123 1.3E-20 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS01535 bffd65fd6888fd1a5e8ecbd23c33a488 230 Gene3D G3DSA:1.10.10.10 159 227 1.2E-10 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMGD1_RS01535 bffd65fd6888fd1a5e8ecbd23c33a488 230 Pfam PF00072 Response regulator receiver domain 14 122 1.4E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS01535 bffd65fd6888fd1a5e8ecbd23c33a488 230 SUPERFAMILY SSF52172 10 184 1.34E-30 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS03220 11a872fd65084b249de8ee2e9cb0a951 175 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 95 130 6.6E-7 T 22-04-2016 IPR001451 Hexapeptide repeat SMGD1_RS03220 11a872fd65084b249de8ee2e9cb0a951 175 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 10 44 4.3E-6 T 22-04-2016 IPR001451 Hexapeptide repeat SMGD1_RS03220 11a872fd65084b249de8ee2e9cb0a951 175 Gene3D G3DSA:2.160.10.10 10 173 4.6E-46 T 22-04-2016 SMGD1_RS03220 11a872fd65084b249de8ee2e9cb0a951 175 SUPERFAMILY SSF51161 3 173 1.33E-48 T 22-04-2016 IPR011004 Trimeric LpxA-like SMGD1_RS03220 11a872fd65084b249de8ee2e9cb0a951 175 PANTHER PTHR13061:SF11 5 175 2.1E-67 T 22-04-2016 SMGD1_RS03220 11a872fd65084b249de8ee2e9cb0a951 175 PANTHER PTHR13061 5 175 2.1E-67 T 22-04-2016 SMGD1_RS09815 f45c636404ce29665217d9f80e91124e 441 PANTHER PTHR11374 1 439 5.3E-246 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 SMGD1_RS09815 f45c636404ce29665217d9f80e91124e 441 SMART SM00984 320 425 7.7E-47 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 SMGD1_RS09815 f45c636404ce29665217d9f80e91124e 441 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 204 295 1.0E-39 T 22-04-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 SMGD1_RS09815 f45c636404ce29665217d9f80e91124e 441 SUPERFAMILY SSF52413 305 436 3.01E-36 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 SMGD1_RS09815 f45c636404ce29665217d9f80e91124e 441 Gene3D G3DSA:3.40.50.720 235 440 9.7E-71 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS09815 f45c636404ce29665217d9f80e91124e 441 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 187 3.9E-69 T 22-04-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 SMGD1_RS09815 f45c636404ce29665217d9f80e91124e 441 SUPERFAMILY SSF51735 1 195 1.04E-58 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS09815 f45c636404ce29665217d9f80e91124e 441 Gene3D G3DSA:1.20.5.100 207 234 1.7E-19 T 22-04-2016 SMGD1_RS09815 f45c636404ce29665217d9f80e91124e 441 PIRSF PIRSF500134 1 441 1.9E-190 T 22-04-2016 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00500+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|UniPathway: UPA00038 SMGD1_RS09815 f45c636404ce29665217d9f80e91124e 441 PIRSF PIRSF000124 1 440 1.2E-154 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 SMGD1_RS09815 f45c636404ce29665217d9f80e91124e 441 SUPERFAMILY SSF48179 204 297 2.72E-34 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SMGD1_RS09815 f45c636404ce29665217d9f80e91124e 441 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 421 1.1E-141 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 SMGD1_RS09815 f45c636404ce29665217d9f80e91124e 441 Gene3D G3DSA:3.40.50.720 1 206 1.3E-81 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS09815 f45c636404ce29665217d9f80e91124e 441 PANTHER PTHR11374:SF18 1 439 5.3E-246 T 22-04-2016 SMGD1_RS09815 f45c636404ce29665217d9f80e91124e 441 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 320 423 8.0E-32 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 SMGD1_RS02635 6a92a9e017621d8ca56910897e8c73eb 353 TIGRFAM TIGR00423 TIGR00423: radical SAM domain protein, CofH subfamily 46 350 1.6E-118 T 22-04-2016 IPR020050 FO synthase, subunit 2 GO:0016765 KEGG: 00680+2.5.1.77|MetaCyc: PWY-5198|UniPathway: UPA00072 SMGD1_RS02635 6a92a9e017621d8ca56910897e8c73eb 353 Hamap MF_00993 Aminodeoxyfutalosine synthase [mqnE]. 1 353 49.007 T 22-04-2016 IPR022432 Aminodeoxyfutalosine synthase GO:0009234 KEGG: 00130+2.5.1.120|MetaCyc: PWY-7371|MetaCyc: PWY-7374|UniPathway: UPA00079 SMGD1_RS02635 6a92a9e017621d8ca56910897e8c73eb 353 PIRSF PIRSF004762 2 352 5.3E-103 T 22-04-2016 IPR005244 FO synthase, subunit 2-like GO:0016765|GO:0051188|GO:0051539 KEGG: 00680+2.5.1.77|MetaCyc: PWY-5198|UniPathway: UPA00072 SMGD1_RS02635 6a92a9e017621d8ca56910897e8c73eb 353 SUPERFAMILY SSF102114 11 343 9.29E-46 T 22-04-2016 SMGD1_RS02635 6a92a9e017621d8ca56910897e8c73eb 353 Pfam PF04055 Radical SAM superfamily 53 222 3.2E-16 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SMGD1_RS02635 6a92a9e017621d8ca56910897e8c73eb 353 PANTHER PTHR22976 2 352 2.5E-123 T 22-04-2016 SMGD1_RS02635 6a92a9e017621d8ca56910897e8c73eb 353 Gene3D G3DSA:3.20.20.70 11 342 1.1E-59 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMGD1_RS02635 6a92a9e017621d8ca56910897e8c73eb 353 PANTHER PTHR22976:SF4 2 352 2.5E-123 T 22-04-2016 SMGD1_RS02635 6a92a9e017621d8ca56910897e8c73eb 353 TIGRFAM TIGR03700 mena_SCO4494: putative menaquinone biosynthesis radical SAM enzyme, SCO4494 family 3 350 2.4E-145 T 22-04-2016 IPR022432 Aminodeoxyfutalosine synthase GO:0009234 KEGG: 00130+2.5.1.120|MetaCyc: PWY-7371|MetaCyc: PWY-7374|UniPathway: UPA00079 SMGD1_RS02635 6a92a9e017621d8ca56910897e8c73eb 353 SMART SM00729 49 269 0.0075 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 SMGD1_RS12925 3db7de3faecef2601b0ba92a5ee2c8a5 464 Pfam PF13426 PAS domain 190 289 4.2E-12 T 22-04-2016 IPR000014 PAS domain SMGD1_RS12925 3db7de3faecef2601b0ba92a5ee2c8a5 464 SUPERFAMILY SSF55073 307 462 7.85E-48 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS12925 3db7de3faecef2601b0ba92a5ee2c8a5 464 Gene3D G3DSA:3.30.450.20 173 289 1.2E-18 T 22-04-2016 SMGD1_RS12925 3db7de3faecef2601b0ba92a5ee2c8a5 464 SUPERFAMILY SSF55785 165 289 2.09E-19 T 22-04-2016 IPR000014 PAS domain SMGD1_RS12925 3db7de3faecef2601b0ba92a5ee2c8a5 464 SMART SM00267 291 464 8.3E-64 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS12925 3db7de3faecef2601b0ba92a5ee2c8a5 464 PANTHER PTHR10799:SF750 111 173 1.7E-28 T 22-04-2016 SMGD1_RS12925 3db7de3faecef2601b0ba92a5ee2c8a5 464 PANTHER PTHR10799:SF750 336 461 1.7E-28 T 22-04-2016 SMGD1_RS12925 3db7de3faecef2601b0ba92a5ee2c8a5 464 PANTHER PTHR10799 111 173 1.7E-28 T 22-04-2016 SMGD1_RS12925 3db7de3faecef2601b0ba92a5ee2c8a5 464 PANTHER PTHR10799 336 461 1.7E-28 T 22-04-2016 SMGD1_RS12925 3db7de3faecef2601b0ba92a5ee2c8a5 464 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 177 298 4.7E-21 T 22-04-2016 IPR000014 PAS domain SMGD1_RS12925 3db7de3faecef2601b0ba92a5ee2c8a5 464 SMART SM00091 178 244 3.2E-7 T 22-04-2016 IPR000014 PAS domain SMGD1_RS12925 3db7de3faecef2601b0ba92a5ee2c8a5 464 Pfam PF00990 Diguanylate cyclase, GGDEF domain 302 460 1.4E-45 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS12925 3db7de3faecef2601b0ba92a5ee2c8a5 464 Gene3D G3DSA:3.30.70.270 304 463 3.0E-51 T 22-04-2016 SMGD1_RS12925 3db7de3faecef2601b0ba92a5ee2c8a5 464 Gene3D G3DSA:3.30.450.40 4 172 9.6E-13 T 22-04-2016 IPR029016 GAF domain-like SMGD1_RS12925 3db7de3faecef2601b0ba92a5ee2c8a5 464 SMART SM00065 28 174 0.0055 T 22-04-2016 IPR003018 GAF domain GO:0005515 SMGD1_RS12925 3db7de3faecef2601b0ba92a5ee2c8a5 464 SUPERFAMILY SSF55781 29 173 3.27E-14 T 22-04-2016 IPR029016 GAF domain-like SMGD1_RS12925 3db7de3faecef2601b0ba92a5ee2c8a5 464 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 298 463 1.2E-51 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS12925 3db7de3faecef2601b0ba92a5ee2c8a5 464 Pfam PF13492 GAF domain 28 166 3.8E-9 T 22-04-2016 IPR003018 GAF domain GO:0005515 SMGD1_RS09790 e7e75ba793a82a5e07da2a8871da66e4 323 Gene3D G3DSA:3.40.50.2000 156 322 4.5E-54 T 22-04-2016 SMGD1_RS09790 e7e75ba793a82a5e07da2a8871da66e4 323 Gene3D G3DSA:3.40.50.2000 1 135 3.4E-26 T 22-04-2016 SMGD1_RS09790 e7e75ba793a82a5e07da2a8871da66e4 323 PANTHER PTHR30160 1 323 3.9E-52 T 22-04-2016 SMGD1_RS09790 e7e75ba793a82a5e07da2a8871da66e4 323 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 78 303 1.9E-40 T 22-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 SMGD1_RS09790 e7e75ba793a82a5e07da2a8871da66e4 323 TIGRFAM TIGR02195 heptsyl_trn_II: lipopolysaccharide heptosyltransferase II 2 322 3.5E-55 T 22-04-2016 IPR011910 Lipopolysaccharide heptosyltransferase II GO:0009103|GO:0016757 KEGG: 00231+2.-.-.-|UniPathway: UPA00958 SMGD1_RS09790 e7e75ba793a82a5e07da2a8871da66e4 323 SUPERFAMILY SSF53756 1 322 4.39E-81 T 22-04-2016 SMGD1_RS09790 e7e75ba793a82a5e07da2a8871da66e4 323 PANTHER PTHR30160:SF7 1 323 3.9E-52 T 22-04-2016 SMGD1_RS00300 e27d08cdfec9d0d4073fc19385ad2fec 111 TIGRFAM TIGR04490 SoxZ_true: thiosulfate oxidation carrier complex protein SoxZ 13 107 3.1E-32 T 22-04-2016 IPR030995 Thiosulfate oxidation carrier complex protein SoxZ SMGD1_RS00300 e27d08cdfec9d0d4073fc19385ad2fec 111 Gene3D G3DSA:2.60.40.10 8 108 7.7E-34 T 22-04-2016 IPR013783 Immunoglobulin-like fold SMGD1_RS00300 e27d08cdfec9d0d4073fc19385ad2fec 111 Pfam PF08770 Sulphur oxidation protein SoxZ 15 105 6.4E-30 T 22-04-2016 IPR014880 Sulphur oxidation protein SoxZ SMGD1_RS00300 e27d08cdfec9d0d4073fc19385ad2fec 111 SUPERFAMILY SSF81296 9 108 4.34E-29 T 22-04-2016 IPR014756 Immunoglobulin E-set SMGD1_RS12160 cdf526ea930eaa60b83276c8e7079107 312 SMART SM00448 190 307 9.5E-13 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS12160 cdf526ea930eaa60b83276c8e7079107 312 Pfam PF00072 Response regulator receiver domain 192 297 4.0E-17 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS12160 cdf526ea930eaa60b83276c8e7079107 312 SUPERFAMILY SSF52172 191 306 1.04E-19 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS12160 cdf526ea930eaa60b83276c8e7079107 312 PANTHER PTHR22617:SF37 1 180 6.2E-21 T 22-04-2016 SMGD1_RS12160 cdf526ea930eaa60b83276c8e7079107 312 PIRSF PIRSF002867 1 312 1.9E-78 T 22-04-2016 IPR024181 Chemotaxis response regulator CheV SMGD1_RS12160 cdf526ea930eaa60b83276c8e7079107 312 SMART SM00260 16 160 3.2E-14 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SMGD1_RS12160 cdf526ea930eaa60b83276c8e7079107 312 Gene3D G3DSA:3.40.50.2300 190 297 4.4E-21 T 22-04-2016 SMGD1_RS12160 cdf526ea930eaa60b83276c8e7079107 312 PANTHER PTHR22617 1 180 6.2E-21 T 22-04-2016 SMGD1_RS12160 cdf526ea930eaa60b83276c8e7079107 312 SUPERFAMILY SSF50341 16 164 3.92E-22 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SMGD1_RS12160 cdf526ea930eaa60b83276c8e7079107 312 Pfam PF01584 CheW-like domain 20 162 2.4E-23 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SMGD1_RS08645 bbdd87cd5e79067f9e2de27081d368f0 738 SMART SM01080 30 356 9.2E-81 T 22-04-2016 IPR007890 CHASE2 SMGD1_RS08645 bbdd87cd5e79067f9e2de27081d368f0 738 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 454 648 1.3E-28 T 22-04-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 SMGD1_RS08645 bbdd87cd5e79067f9e2de27081d368f0 738 SMART SM00044 416 632 2.2E-5 T 22-04-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 SMGD1_RS08645 bbdd87cd5e79067f9e2de27081d368f0 738 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 SMGD1_RS08645 bbdd87cd5e79067f9e2de27081d368f0 738 Pfam PF05226 CHASE2 domain 22 353 1.8E-59 T 22-04-2016 IPR007890 CHASE2 SMGD1_RS08645 bbdd87cd5e79067f9e2de27081d368f0 738 PANTHER PTHR11920:SF341 566 671 2.5E-54 T 22-04-2016 SMGD1_RS08645 bbdd87cd5e79067f9e2de27081d368f0 738 PANTHER PTHR11920:SF341 449 550 2.5E-54 T 22-04-2016 SMGD1_RS08645 bbdd87cd5e79067f9e2de27081d368f0 738 PANTHER PTHR11920:SF341 152 166 2.5E-54 T 22-04-2016 SMGD1_RS08645 bbdd87cd5e79067f9e2de27081d368f0 738 Gene3D G3DSA:3.30.70.1230 452 653 1.9E-42 T 22-04-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 SMGD1_RS08645 bbdd87cd5e79067f9e2de27081d368f0 738 PANTHER PTHR11920 566 671 2.5E-54 T 22-04-2016 SMGD1_RS08645 bbdd87cd5e79067f9e2de27081d368f0 738 PANTHER PTHR11920 449 550 2.5E-54 T 22-04-2016 SMGD1_RS08645 bbdd87cd5e79067f9e2de27081d368f0 738 PANTHER PTHR11920 152 166 2.5E-54 T 22-04-2016 SMGD1_RS08645 bbdd87cd5e79067f9e2de27081d368f0 738 SUPERFAMILY SSF55073 450 651 8.01E-51 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS07825 26425deefd54679e803c3957dcf061a2 131 SUPERFAMILY SSF52833 16 125 2.22E-20 T 22-04-2016 IPR012336 Thioredoxin-like fold SMGD1_RS07825 26425deefd54679e803c3957dcf061a2 131 Pfam PF13899 Thioredoxin-like 20 101 1.2E-11 T 22-04-2016 SMGD1_RS07825 26425deefd54679e803c3957dcf061a2 131 Gene3D G3DSA:3.40.30.10 18 125 1.5E-22 T 22-04-2016 IPR012336 Thioredoxin-like fold SMGD1_RS03365 a0d8d8a27329c9d9b270c984d629c664 505 PANTHER PTHR32089 58 309 3.6E-23 T 22-04-2016 SMGD1_RS03365 a0d8d8a27329c9d9b270c984d629c664 505 Pfam PF05227 CHASE3 domain 35 169 9.3E-38 T 22-04-2016 IPR007891 CHASE3 SMGD1_RS03365 a0d8d8a27329c9d9b270c984d629c664 505 Gene3D G3DSA:3.30.70.270 335 499 7.3E-49 T 22-04-2016 SMGD1_RS03365 a0d8d8a27329c9d9b270c984d629c664 505 SUPERFAMILY SSF55785 224 323 2.62E-29 T 22-04-2016 IPR000014 PAS domain SMGD1_RS03365 a0d8d8a27329c9d9b270c984d629c664 505 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 329 498 1.9E-46 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS03365 a0d8d8a27329c9d9b270c984d629c664 505 SMART SM00086 284 326 1.4E-6 T 22-04-2016 IPR001610 PAC motif SMGD1_RS03365 a0d8d8a27329c9d9b270c984d629c664 505 Pfam PF00990 Diguanylate cyclase, GGDEF domain 334 494 9.7E-43 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS03365 a0d8d8a27329c9d9b270c984d629c664 505 PANTHER PTHR32089:SF52 58 309 3.6E-23 T 22-04-2016 SMGD1_RS03365 a0d8d8a27329c9d9b270c984d629c664 505 SUPERFAMILY SSF55073 338 497 5.65E-44 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS03365 a0d8d8a27329c9d9b270c984d629c664 505 Pfam PF08447 PAS fold 235 316 1.7E-16 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 SMGD1_RS03365 a0d8d8a27329c9d9b270c984d629c664 505 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 221 331 1.9E-21 T 22-04-2016 IPR000014 PAS domain SMGD1_RS03365 a0d8d8a27329c9d9b270c984d629c664 505 Gene3D G3DSA:3.30.450.20 223 325 2.0E-27 T 22-04-2016 SMGD1_RS03365 a0d8d8a27329c9d9b270c984d629c664 505 SMART SM00267 322 498 9.6E-51 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS03365 a0d8d8a27329c9d9b270c984d629c664 505 SMART SM00091 210 278 0.0011 T 22-04-2016 IPR000014 PAS domain SMGD1_RS03290 584e80bc973cdbbcab707eba1db91c02 472 Pfam PF11066 Protein of unknown function (DUF2867) 323 462 1.3E-28 T 22-04-2016 IPR021295 Protein of unknown function DUF2867 SMGD1_RS03290 584e80bc973cdbbcab707eba1db91c02 472 Gene3D G3DSA:3.40.50.720 1 207 3.8E-30 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS03290 584e80bc973cdbbcab707eba1db91c02 472 SUPERFAMILY SSF51735 1 293 6.95E-39 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS03290 584e80bc973cdbbcab707eba1db91c02 472 PANTHER PTHR10366:SF401 257 305 5.8E-58 T 22-04-2016 SMGD1_RS03290 584e80bc973cdbbcab707eba1db91c02 472 PANTHER PTHR10366:SF401 2 236 5.8E-58 T 22-04-2016 SMGD1_RS03290 584e80bc973cdbbcab707eba1db91c02 472 Pfam PF13460 NAD(P)H-binding 7 118 1.9E-16 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS03290 584e80bc973cdbbcab707eba1db91c02 472 PANTHER PTHR10366 257 305 5.8E-58 T 22-04-2016 SMGD1_RS03290 584e80bc973cdbbcab707eba1db91c02 472 PANTHER PTHR10366 2 236 5.8E-58 T 22-04-2016 SMGD1_RS06730 1648aa0922348860790b2c987806889c 164 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 3 162 3.3E-44 T 22-04-2016 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148|UniPathway: UPA00148 SMGD1_RS06730 1648aa0922348860790b2c987806889c 164 PANTHER PTHR34848 1 164 2.0E-40 T 22-04-2016 SMGD1_RS06730 1648aa0922348860790b2c987806889c 164 PIRSF PIRSF006135 1 164 1.9E-39 T 22-04-2016 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148|UniPathway: UPA00148 SMGD1_RS06730 1648aa0922348860790b2c987806889c 164 Gene3D G3DSA:3.40.50.300 3 164 2.2E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS06730 1648aa0922348860790b2c987806889c 164 SUPERFAMILY SSF52540 4 164 1.3E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS07435 a3f9aedffe928c9e35d432be417bba08 206 SMART SM00671 48 83 3.0E-7 T 22-04-2016 IPR006597 Sel1-like repeat SMGD1_RS07435 a3f9aedffe928c9e35d432be417bba08 206 SMART SM00671 120 155 1.3E-7 T 22-04-2016 IPR006597 Sel1-like repeat SMGD1_RS07435 a3f9aedffe928c9e35d432be417bba08 206 SMART SM00671 84 119 5.5E-9 T 22-04-2016 IPR006597 Sel1-like repeat SMGD1_RS07435 a3f9aedffe928c9e35d432be417bba08 206 SMART SM00671 10 47 150.0 T 22-04-2016 IPR006597 Sel1-like repeat SMGD1_RS07435 a3f9aedffe928c9e35d432be417bba08 206 SUPERFAMILY SSF81901 21 199 4.97E-41 T 22-04-2016 SMGD1_RS07435 a3f9aedffe928c9e35d432be417bba08 206 Pfam PF08238 Sel1 repeat 121 154 1.1E-8 T 22-04-2016 IPR006597 Sel1-like repeat SMGD1_RS07435 a3f9aedffe928c9e35d432be417bba08 206 Pfam PF08238 Sel1 repeat 84 119 7.7E-9 T 22-04-2016 IPR006597 Sel1-like repeat SMGD1_RS07435 a3f9aedffe928c9e35d432be417bba08 206 Pfam PF08238 Sel1 repeat 164 186 16.0 T 22-04-2016 IPR006597 Sel1-like repeat SMGD1_RS07435 a3f9aedffe928c9e35d432be417bba08 206 Pfam PF08238 Sel1 repeat 49 83 6.4E-7 T 22-04-2016 IPR006597 Sel1-like repeat SMGD1_RS07435 a3f9aedffe928c9e35d432be417bba08 206 PANTHER PTHR11102 1 182 1.5E-37 T 22-04-2016 SMGD1_RS07435 a3f9aedffe928c9e35d432be417bba08 206 Gene3D G3DSA:1.25.40.10 26 118 7.8E-30 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS07435 a3f9aedffe928c9e35d432be417bba08 206 Gene3D G3DSA:1.25.40.10 119 190 1.0E-15 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS04205 a8df332a17ecd5b8662bc65fada0ae15 187 SUPERFAMILY SSF142695 3 166 6.93E-51 T 22-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 SMGD1_RS04205 a8df332a17ecd5b8662bc65fada0ae15 187 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 6 187 3.6E-69 T 22-04-2016 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 SMGD1_RS04205 a8df332a17ecd5b8662bc65fada0ae15 187 Pfam PF00925 GTP cyclohydrolase II 8 163 6.5E-57 T 22-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 SMGD1_RS04205 a8df332a17ecd5b8662bc65fada0ae15 187 PANTHER PTHR21327 3 187 9.8E-78 T 22-04-2016 SMGD1_RS04205 a8df332a17ecd5b8662bc65fada0ae15 187 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 1 187 35.104 T 22-04-2016 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 SMGD1_RS07620 249e21cc196aaa8a35da041e0ebc1cc2 129 PANTHER PTHR21569 4 129 4.0E-52 T 22-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 SMGD1_RS07620 249e21cc196aaa8a35da041e0ebc1cc2 129 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 129 27.779 T 22-04-2016 IPR023035 Ribosomal protein S9, bacterial/plastid SMGD1_RS07620 249e21cc196aaa8a35da041e0ebc1cc2 129 SUPERFAMILY SSF54211 4 129 2.2E-41 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SMGD1_RS07620 249e21cc196aaa8a35da041e0ebc1cc2 129 Gene3D G3DSA:3.30.230.10 3 129 1.1E-44 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SMGD1_RS07620 249e21cc196aaa8a35da041e0ebc1cc2 129 Pfam PF00380 Ribosomal protein S9/S16 8 129 2.7E-41 T 22-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 SMGD1_RS07620 249e21cc196aaa8a35da041e0ebc1cc2 129 ProSitePatterns PS00360 Ribosomal protein S9 signature. 68 86 - T 22-04-2016 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 SMGD1_RS05320 86c7aeed6cf7dec3a030230dc083fbca 117 SUPERFAMILY SSF143447 4 102 1.96E-14 T 22-04-2016 IPR002733 AMMECR1 domain SMGD1_RS05320 86c7aeed6cf7dec3a030230dc083fbca 117 Pfam PF01871 AMMECR1 8 101 2.6E-12 T 22-04-2016 IPR002733 AMMECR1 domain SMGD1_RS05320 86c7aeed6cf7dec3a030230dc083fbca 117 Gene3D G3DSA:3.30.700.20 3 100 5.5E-18 T 22-04-2016 IPR027485 AMMECR1, N-terminal SMGD1_RS12380 6182ddeebe337a5b466aa5e86e556b88 224 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 77 91 - T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 SMGD1_RS12380 6182ddeebe337a5b466aa5e86e556b88 224 PIRSF PIRSF004848 1 224 6.8E-64 T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 SMGD1_RS12380 6182ddeebe337a5b466aa5e86e556b88 224 PANTHER PTHR10146 33 222 1.5E-61 T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 SMGD1_RS12380 6182ddeebe337a5b466aa5e86e556b88 224 Gene3D G3DSA:3.20.20.10 5 223 2.1E-65 T 22-04-2016 IPR029066 PLP-binding barrel SMGD1_RS12380 6182ddeebe337a5b466aa5e86e556b88 224 Pfam PF01168 Alanine racemase, N-terminal domain 12 222 1.6E-21 T 22-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SMGD1_RS12380 6182ddeebe337a5b466aa5e86e556b88 224 SUPERFAMILY SSF51419 8 222 8.9E-60 T 22-04-2016 IPR029066 PLP-binding barrel SMGD1_RS12380 6182ddeebe337a5b466aa5e86e556b88 224 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 6 223 4.4E-61 T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 SMGD1_RS04685 506f8a0610e2fe3ea339aae1c1b47e96 130 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 130 30.76 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 SMGD1_RS04685 506f8a0610e2fe3ea339aae1c1b47e96 130 Gene3D G3DSA:3.30.420.80 8 130 1.8E-46 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 SMGD1_RS04685 506f8a0610e2fe3ea339aae1c1b47e96 130 Pfam PF00411 Ribosomal protein S11 19 129 5.9E-41 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 SMGD1_RS04685 506f8a0610e2fe3ea339aae1c1b47e96 130 SUPERFAMILY SSF53137 14 130 1.24E-40 T 22-04-2016 SMGD1_RS04685 506f8a0610e2fe3ea339aae1c1b47e96 130 PANTHER PTHR11759 11 130 6.6E-53 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 SMGD1_RS04685 506f8a0610e2fe3ea339aae1c1b47e96 130 PIRSF PIRSF002131 1 130 6.9E-44 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 SMGD1_RS04685 506f8a0610e2fe3ea339aae1c1b47e96 130 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 12 127 2.8E-49 T 22-04-2016 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS14120 7c2c519f121649f375da42b2768f25e2 661 Gene3D G3DSA:1.10.287.950 425 630 8.5E-44 T 22-04-2016 SMGD1_RS14120 7c2c519f121649f375da42b2768f25e2 661 Pfam PF14827 Double sensory domain of two-component sensor kinase 55 292 4.1E-7 T 22-04-2016 IPR029150 Double Cache domain 3 SMGD1_RS14120 7c2c519f121649f375da42b2768f25e2 661 Pfam PF00672 HAMP domain 309 379 2.3E-10 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SMGD1_RS14120 7c2c519f121649f375da42b2768f25e2 661 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 463 655 1.2E-40 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SMGD1_RS14120 7c2c519f121649f375da42b2768f25e2 661 SMART SM00304 329 383 1.3E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SMGD1_RS14120 7c2c519f121649f375da42b2768f25e2 661 PANTHER PTHR32089 261 661 1.3E-76 T 22-04-2016 SMGD1_RS14120 7c2c519f121649f375da42b2768f25e2 661 SUPERFAMILY SSF58104 351 660 6.8E-59 T 22-04-2016 SMGD1_RS14120 7c2c519f121649f375da42b2768f25e2 661 SMART SM00283 398 659 9.8E-44 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SMGD1_RS07540 f753047a16a0834d3ae3635a99283ae5 169 Pfam PF03448 MgtE intracellular N domain 109 167 4.9E-9 T 22-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain SMGD1_RS07540 f753047a16a0834d3ae3635a99283ae5 169 Gene3D G3DSA:1.25.60.10 106 167 6.7E-8 T 22-04-2016 SMGD1_RS07540 f753047a16a0834d3ae3635a99283ae5 169 SUPERFAMILY SSF158791 110 167 1.83E-10 T 22-04-2016 SMGD1_RS06145 33a650d7555ee307fed73fe24e3b6cc6 496 PANTHER PTHR10632:SF2 8 495 1.3E-121 T 22-04-2016 SMGD1_RS06145 33a650d7555ee307fed73fe24e3b6cc6 496 PANTHER PTHR10632 8 495 1.3E-121 T 22-04-2016 SMGD1_RS06145 33a650d7555ee307fed73fe24e3b6cc6 496 SUPERFAMILY SSF51905 347 421 2.47E-24 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS06145 33a650d7555ee307fed73fe24e3b6cc6 496 SUPERFAMILY SSF51905 58 163 2.47E-24 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS06145 33a650d7555ee307fed73fe24e3b6cc6 496 Gene3D G3DSA:3.50.50.60 353 422 1.7E-45 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS06145 33a650d7555ee307fed73fe24e3b6cc6 496 Gene3D G3DSA:3.50.50.60 57 171 1.7E-45 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS06145 33a650d7555ee307fed73fe24e3b6cc6 496 SUPERFAMILY SSF51905 226 352 3.4E-14 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS06145 33a650d7555ee307fed73fe24e3b6cc6 496 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 58 174 1.1E-10 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS05810 4f0b5ba4dd28c3363cf18d658661a82e 369 SUPERFAMILY SSF56281 2 338 4.48E-49 T 22-04-2016 IPR001279 Metallo-beta-lactamase SMGD1_RS05810 4f0b5ba4dd28c3363cf18d658661a82e 369 Pfam PF00753 Metallo-beta-lactamase superfamily 86 277 4.6E-15 T 22-04-2016 IPR001279 Metallo-beta-lactamase SMGD1_RS05810 4f0b5ba4dd28c3363cf18d658661a82e 369 Gene3D G3DSA:3.60.15.10 59 310 9.2E-39 T 22-04-2016 IPR001279 Metallo-beta-lactamase SMGD1_RS05810 4f0b5ba4dd28c3363cf18d658661a82e 369 SMART SM00849 87 285 2.7E-11 T 22-04-2016 IPR001279 Metallo-beta-lactamase SMGD1_RS11040 900a95a48d812e084a35e57d11ed03c1 360 Gene3D G3DSA:3.40.50.300 200 324 2.2E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS11040 900a95a48d812e084a35e57d11ed03c1 360 SUPERFAMILY SSF52540 198 320 4.56E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS11040 900a95a48d812e084a35e57d11ed03c1 360 Pfam PF13671 AAA domain 201 321 4.0E-8 T 22-04-2016 SMGD1_RS11040 900a95a48d812e084a35e57d11ed03c1 360 SUPERFAMILY SSF109604 29 125 4.93E-6 T 22-04-2016 SMGD1_RS14095 65a85314c38aeb8d757224cfe07a36af 476 PANTHER PTHR33908 1 421 4.3E-30 T 22-04-2016 SMGD1_RS14095 65a85314c38aeb8d757224cfe07a36af 476 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 51 211 2.7E-30 T 22-04-2016 SMGD1_RS11085 0e123244c02536b3614b7350c8f8c813 724 Pfam PF00005 ABC transporter 504 652 3.5E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMGD1_RS11085 0e123244c02536b3614b7350c8f8c813 724 Gene3D G3DSA:3.90.70.10 10 143 2.6E-37 T 22-04-2016 SMGD1_RS11085 0e123244c02536b3614b7350c8f8c813 724 SUPERFAMILY SSF52540 478 708 1.08E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS11085 0e123244c02536b3614b7350c8f8c813 724 TIGRFAM TIGR03375 type_I_sec_LssB: type I secretion system ATPase 12 716 5.4E-267 T 22-04-2016 IPR017750 ATPase, type I secretion system SMGD1_RS11085 0e123244c02536b3614b7350c8f8c813 724 PANTHER PTHR24221:SF248 142 712 5.0E-215 T 22-04-2016 SMGD1_RS11085 0e123244c02536b3614b7350c8f8c813 724 PANTHER PTHR24221:SF248 32 82 5.0E-215 T 22-04-2016 SMGD1_RS11085 0e123244c02536b3614b7350c8f8c813 724 Pfam PF00664 ABC transporter transmembrane region 178 435 1.4E-23 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SMGD1_RS11085 0e123244c02536b3614b7350c8f8c813 724 PANTHER PTHR24221 142 712 5.0E-215 T 22-04-2016 SMGD1_RS11085 0e123244c02536b3614b7350c8f8c813 724 PANTHER PTHR24221 32 82 5.0E-215 T 22-04-2016 SMGD1_RS11085 0e123244c02536b3614b7350c8f8c813 724 SUPERFAMILY SSF90123 160 472 2.62E-50 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SMGD1_RS11085 0e123244c02536b3614b7350c8f8c813 724 Gene3D G3DSA:3.40.50.300 486 712 1.9E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS11085 0e123244c02536b3614b7350c8f8c813 724 Gene3D G3DSA:1.20.1560.10 160 470 7.7E-52 T 22-04-2016 SMGD1_RS11085 0e123244c02536b3614b7350c8f8c813 724 SMART SM00382 513 699 3.6E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain SMGD1_RS09920 17c05585436d61598514dc717034efdf 311 Gene3D G3DSA:3.30.70.270 156 310 4.5E-46 T 22-04-2016 SMGD1_RS09920 17c05585436d61598514dc717034efdf 311 SUPERFAMILY SSF55073 159 309 5.65E-43 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS09920 17c05585436d61598514dc717034efdf 311 Pfam PF00990 Diguanylate cyclase, GGDEF domain 156 307 1.1E-42 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS09920 17c05585436d61598514dc717034efdf 311 SMART SM00267 143 311 8.8E-48 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS09920 17c05585436d61598514dc717034efdf 311 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 153 309 2.6E-46 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS09920 17c05585436d61598514dc717034efdf 311 PANTHER PTHR10799 6 117 4.9E-25 T 22-04-2016 SMGD1_RS09920 17c05585436d61598514dc717034efdf 311 PANTHER PTHR10799 187 310 4.9E-25 T 22-04-2016 SMGD1_RS09920 17c05585436d61598514dc717034efdf 311 PANTHER PTHR10799:SF750 6 117 4.9E-25 T 22-04-2016 SMGD1_RS09920 17c05585436d61598514dc717034efdf 311 PANTHER PTHR10799:SF750 187 310 4.9E-25 T 22-04-2016 SMGD1_RS10170 ee9b02998705b6f81de50a4d5a087bfc 500 Gene3D G3DSA:3.40.50.300 23 173 5.3E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS10170 ee9b02998705b6f81de50a4d5a087bfc 500 SUPERFAMILY SSF52540 41 467 2.46E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS10170 ee9b02998705b6f81de50a4d5a087bfc 500 Pfam PF13538 UvrD-like helicase C-terminal domain 407 455 7.3E-10 T 22-04-2016 IPR027785 UvrD-like helicase C-terminal domain SMGD1_RS10170 ee9b02998705b6f81de50a4d5a087bfc 500 Gene3D G3DSA:3.40.50.300 396 462 1.2E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS10170 ee9b02998705b6f81de50a4d5a087bfc 500 Gene3D G3DSA:3.40.50.300 174 291 1.2E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS10170 ee9b02998705b6f81de50a4d5a087bfc 500 Pfam PF13604 AAA domain 41 223 3.0E-22 T 22-04-2016 SMGD1_RS04080 6f9852654bbe6b64dbf6e6be384bb3e9 177 PANTHER PTHR33231 1 176 4.1E-20 T 22-04-2016 SMGD1_RS04080 6f9852654bbe6b64dbf6e6be384bb3e9 177 Gene3D G3DSA:3.30.160.100 1 98 1.3E-18 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 SMGD1_RS04080 6f9852654bbe6b64dbf6e6be384bb3e9 177 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 96 2.5E-16 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 SMGD1_RS04080 6f9852654bbe6b64dbf6e6be384bb3e9 177 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 98 2.3E-15 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 SMGD1_RS04080 6f9852654bbe6b64dbf6e6be384bb3e9 177 Pfam PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus 122 176 1.6E-11 T 22-04-2016 IPR032528 Sigma 54 modulation/S30EA ribosomal protein, C-terminal SMGD1_RS04080 6f9852654bbe6b64dbf6e6be384bb3e9 177 SUPERFAMILY SSF69754 1 101 1.27E-19 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 SMGD1_RS01135 3efd2c7d3848bbaa92db6f890f0725b1 516 Gene3D G3DSA:3.30.565.10 359 509 3.4E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS01135 3efd2c7d3848bbaa92db6f890f0725b1 516 Pfam PF00512 His Kinase A (phospho-acceptor) domain 291 358 1.5E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS01135 3efd2c7d3848bbaa92db6f890f0725b1 516 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 404 509 1.9E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS01135 3efd2c7d3848bbaa92db6f890f0725b1 516 Gene3D G3DSA:1.10.287.130 288 356 7.5E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS01135 3efd2c7d3848bbaa92db6f890f0725b1 516 PANTHER PTHR24423 286 509 1.1E-36 T 22-04-2016 SMGD1_RS01135 3efd2c7d3848bbaa92db6f890f0725b1 516 PANTHER PTHR24423 1 25 1.1E-36 T 22-04-2016 SMGD1_RS01135 3efd2c7d3848bbaa92db6f890f0725b1 516 PANTHER PTHR24423 228 244 1.1E-36 T 22-04-2016 SMGD1_RS01135 3efd2c7d3848bbaa92db6f890f0725b1 516 SMART SM00388 290 360 1.5E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS01135 3efd2c7d3848bbaa92db6f890f0725b1 516 SUPERFAMILY SSF55874 353 509 1.23E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS01135 3efd2c7d3848bbaa92db6f890f0725b1 516 SUPERFAMILY SSF47384 287 358 4.71E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS01135 3efd2c7d3848bbaa92db6f890f0725b1 516 PRINTS PR00344 Bacterial sensor protein C-terminal signature 473 491 7.0E-7 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS01135 3efd2c7d3848bbaa92db6f890f0725b1 516 PRINTS PR00344 Bacterial sensor protein C-terminal signature 460 470 7.0E-7 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS01135 3efd2c7d3848bbaa92db6f890f0725b1 516 PRINTS PR00344 Bacterial sensor protein C-terminal signature 442 456 7.0E-7 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS01135 3efd2c7d3848bbaa92db6f890f0725b1 516 SMART SM00387 401 513 2.3E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS07555 1179cc15f17c5fbb8653a68d1285204d 497 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 12 463 3.8E-104 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SMGD1_RS07555 1179cc15f17c5fbb8653a68d1285204d 497 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 224 279 - T 22-04-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SMGD1_RS07555 1179cc15f17c5fbb8653a68d1285204d 497 PANTHER PTHR10422:SF21 1 485 8.0E-166 T 22-04-2016 SMGD1_RS07555 1179cc15f17c5fbb8653a68d1285204d 497 SUPERFAMILY SSF81442 8 494 4.45E-110 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SMGD1_RS07555 1179cc15f17c5fbb8653a68d1285204d 497 PANTHER PTHR10422 1 485 8.0E-166 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SMGD1_RS07555 1179cc15f17c5fbb8653a68d1285204d 497 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 7 494 5.8E-203 T 22-04-2016 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SMGD1_RS07555 1179cc15f17c5fbb8653a68d1285204d 497 Gene3D G3DSA:1.20.210.10 10 492 2.7E-65 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SMGD1_RS13230 35d9e3d93e7268d0444c4bb780e30d70 696 SUPERFAMILY SSF64518 1 184 2.35E-43 T 22-04-2016 SMGD1_RS13230 35d9e3d93e7268d0444c4bb780e30d70 696 SUPERFAMILY SSF64518 426 696 2.35E-43 T 22-04-2016 SMGD1_RS13230 35d9e3d93e7268d0444c4bb780e30d70 696 PANTHER PTHR30244 1 191 7.8E-24 T 22-04-2016 SMGD1_RS13230 35d9e3d93e7268d0444c4bb780e30d70 696 PANTHER PTHR30244 550 696 7.8E-24 T 22-04-2016 SMGD1_RS13230 35d9e3d93e7268d0444c4bb780e30d70 696 PANTHER PTHR30244:SF5 1 191 7.8E-24 T 22-04-2016 SMGD1_RS13230 35d9e3d93e7268d0444c4bb780e30d70 696 PANTHER PTHR30244:SF5 550 696 7.8E-24 T 22-04-2016 SMGD1_RS13230 35d9e3d93e7268d0444c4bb780e30d70 696 Gene3D G3DSA:1.20.1330.10 601 645 2.3E-4 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SMGD1_RS13230 35d9e3d93e7268d0444c4bb780e30d70 696 Gene3D G3DSA:1.20.1330.10 214 238 1.1E-16 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SMGD1_RS13230 35d9e3d93e7268d0444c4bb780e30d70 696 Gene3D G3DSA:1.20.1330.10 510 557 2.3E-4 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SMGD1_RS13230 35d9e3d93e7268d0444c4bb780e30d70 696 Gene3D G3DSA:1.20.1330.10 55 172 1.1E-16 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SMGD1_RS13230 35d9e3d93e7268d0444c4bb780e30d70 696 Pfam PF00669 Bacterial flagellin N-terminal helical region 15 139 1.7E-13 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SMGD1_RS11480 401aee8e28af4803070be3b77051f37f 236 Gene3D G3DSA:3.30.1270.10 210 235 8.1E-29 T 22-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 SMGD1_RS11480 401aee8e28af4803070be3b77051f37f 236 Gene3D G3DSA:3.30.1270.10 81 133 8.1E-29 T 22-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 SMGD1_RS11480 401aee8e28af4803070be3b77051f37f 236 SUPERFAMILY SSF75625 1 235 4.84E-74 T 22-04-2016 IPR029072 YebC-like SMGD1_RS11480 401aee8e28af4803070be3b77051f37f 236 Pfam PF01709 Transcriptional regulator 5 235 2.0E-73 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like SMGD1_RS11480 401aee8e28af4803070be3b77051f37f 236 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 1 236 25.68 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like SMGD1_RS11480 401aee8e28af4803070be3b77051f37f 236 Gene3D G3DSA:1.10.10.200 1 76 7.2E-26 T 22-04-2016 IPR017856 Integrase, N-terminal zinc-binding domain-like SMGD1_RS11480 401aee8e28af4803070be3b77051f37f 236 PANTHER PTHR12532 1 236 9.0E-71 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like SMGD1_RS11480 401aee8e28af4803070be3b77051f37f 236 Gene3D G3DSA:3.30.70.980 134 201 5.3E-26 T 22-04-2016 IPR026564 Transcriptional regulator TACO1-like, domain 3 SMGD1_RS11480 401aee8e28af4803070be3b77051f37f 236 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 2 235 2.9E-74 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like SMGD1_RS08960 35b2fa02da0b7d8c7cb44860184595e2 319 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 317 1.7E-35 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMGD1_RS08960 35b2fa02da0b7d8c7cb44860184595e2 319 Gene3D G3DSA:1.10.3720.10 86 313 1.4E-17 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMGD1_RS08960 35b2fa02da0b7d8c7cb44860184595e2 319 PANTHER PTHR30465:SF24 3 318 2.8E-93 T 22-04-2016 SMGD1_RS08960 35b2fa02da0b7d8c7cb44860184595e2 319 PANTHER PTHR30465 3 318 2.8E-93 T 22-04-2016 SMGD1_RS08960 35b2fa02da0b7d8c7cb44860184595e2 319 SUPERFAMILY SSF161098 91 300 4.58E-17 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMGD1_RS10125 77cca76595ea907d1f59574d1e831096 1646 SMART SM00490 524 614 3.0E-14 T 22-04-2016 IPR001650 Helicase, C-terminal SMGD1_RS10125 77cca76595ea907d1f59574d1e831096 1646 Gene3D G3DSA:3.40.50.300 471 630 8.5E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS10125 77cca76595ea907d1f59574d1e831096 1646 Gene3D G3DSA:3.40.50.300 1056 1275 4.2E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS10125 77cca76595ea907d1f59574d1e831096 1646 Pfam PF00270 DEAD/DEAH box helicase 277 451 4.2E-20 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SMGD1_RS10125 77cca76595ea907d1f59574d1e831096 1646 Pfam PF00580 UvrD/REP helicase N-terminal domain 1063 1160 1.2E-13 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 SMGD1_RS10125 77cca76595ea907d1f59574d1e831096 1646 Pfam PF00580 UvrD/REP helicase N-terminal domain 1185 1246 1.1E-5 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 SMGD1_RS10125 77cca76595ea907d1f59574d1e831096 1646 Pfam PF13361 UvrD-like helicase C-terminal domain 1267 1365 1.9E-6 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 SMGD1_RS10125 77cca76595ea907d1f59574d1e831096 1646 Pfam PF13361 UvrD-like helicase C-terminal domain 1411 1503 3.3E-12 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 SMGD1_RS10125 77cca76595ea907d1f59574d1e831096 1646 SUPERFAMILY SSF52540 318 631 1.86E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS10125 77cca76595ea907d1f59574d1e831096 1646 Gene3D G3DSA:3.40.50.300 277 466 2.7E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS10125 77cca76595ea907d1f59574d1e831096 1646 Pfam PF00271 Helicase conserved C-terminal domain 489 613 1.7E-11 T 22-04-2016 IPR001650 Helicase, C-terminal SMGD1_RS10125 77cca76595ea907d1f59574d1e831096 1646 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 277 640 8.6E-69 T 22-04-2016 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 SMGD1_RS10125 77cca76595ea907d1f59574d1e831096 1646 Gene3D G3DSA:3.40.50.300 1276 1364 5.7E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS10125 77cca76595ea907d1f59574d1e831096 1646 Gene3D G3DSA:3.40.50.300 1445 1513 5.7E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS10125 77cca76595ea907d1f59574d1e831096 1646 SUPERFAMILY SSF53098 33 161 1.63E-8 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMGD1_RS10125 77cca76595ea907d1f59574d1e831096 1646 SUPERFAMILY SSF52540 1056 1504 2.3E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS10125 77cca76595ea907d1f59574d1e831096 1646 SMART SM00487 1059 1249 0.0089 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SMGD1_RS10125 77cca76595ea907d1f59574d1e831096 1646 SMART SM00487 242 480 1.8E-21 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SMGD1_RS10125 77cca76595ea907d1f59574d1e831096 1646 PANTHER PTHR13710 1635 1644 3.8E-76 T 22-04-2016 SMGD1_RS10125 77cca76595ea907d1f59574d1e831096 1646 PANTHER PTHR13710 278 632 3.8E-76 T 22-04-2016 SMGD1_RS12765 472fe26b8d074552616fea37c70b4c25 166 PANTHER PTHR23089 4 156 4.3E-53 T 22-04-2016 IPR001310 Histidine triad (HIT) protein SMGD1_RS12765 472fe26b8d074552616fea37c70b4c25 166 Gene3D G3DSA:3.30.428.10 21 145 6.2E-35 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 SMGD1_RS12765 472fe26b8d074552616fea37c70b4c25 166 SUPERFAMILY SSF54197 4 155 4.95E-39 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 SMGD1_RS12765 472fe26b8d074552616fea37c70b4c25 166 PANTHER PTHR23089:SF16 4 156 4.3E-53 T 22-04-2016 SMGD1_RS12765 472fe26b8d074552616fea37c70b4c25 166 Pfam PF01230 HIT domain 35 127 2.9E-16 T 22-04-2016 IPR001310 Histidine triad (HIT) protein SMGD1_RS07530 3f0be39fe2a29eb35ccbb00342abc185 415 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 415 1.3E-162 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 SMGD1_RS07530 3f0be39fe2a29eb35ccbb00342abc185 415 SMART SM00788 3 414 8.8E-255 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 SMGD1_RS07530 3f0be39fe2a29eb35ccbb00342abc185 415 Pfam PF00709 Adenylosuccinate synthetase 5 413 2.3E-167 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 SMGD1_RS07530 3f0be39fe2a29eb35ccbb00342abc185 415 PANTHER PTHR11846 6 415 1.0E-212 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 SMGD1_RS07530 3f0be39fe2a29eb35ccbb00342abc185 415 Gene3D G3DSA:3.90.170.10 261 415 3.7E-64 T 22-04-2016 SMGD1_RS07530 3f0be39fe2a29eb35ccbb00342abc185 415 Gene3D G3DSA:3.40.440.10 1 93 2.1E-69 T 22-04-2016 SMGD1_RS07530 3f0be39fe2a29eb35ccbb00342abc185 415 Gene3D G3DSA:3.40.440.10 191 260 2.1E-69 T 22-04-2016 SMGD1_RS07530 3f0be39fe2a29eb35ccbb00342abc185 415 Gene3D G3DSA:1.10.300.10 97 190 5.5E-28 T 22-04-2016 SMGD1_RS07530 3f0be39fe2a29eb35ccbb00342abc185 415 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 128 139 - T 22-04-2016 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|UniPathway: UPA00075 SMGD1_RS07530 3f0be39fe2a29eb35ccbb00342abc185 415 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 415 182.122 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 SMGD1_RS07530 3f0be39fe2a29eb35ccbb00342abc185 415 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 10 17 - T 22-04-2016 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 SMGD1_RS07530 3f0be39fe2a29eb35ccbb00342abc185 415 SUPERFAMILY SSF52540 1 414 1.06E-158 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS08925 cf4c6e16710a4f99f5c0ada0ff5ac660 114 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 1 100 17.187 T 22-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS SMGD1_RS08925 cf4c6e16710a4f99f5c0ada0ff5ac660 114 Gene3D G3DSA:3.30.460.10 2 98 5.4E-23 T 22-04-2016 SMGD1_RS08925 cf4c6e16710a4f99f5c0ada0ff5ac660 114 PANTHER PTHR21043 5 100 8.0E-17 T 22-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS SMGD1_RS08925 cf4c6e16710a4f99f5c0ada0ff5ac660 114 SUPERFAMILY SSF81301 2 98 2.13E-22 T 22-04-2016 SMGD1_RS08925 cf4c6e16710a4f99f5c0ada0ff5ac660 114 Pfam PF02410 Ribosomal silencing factor during starvation 7 97 5.9E-20 T 22-04-2016 SMGD1_RS08925 cf4c6e16710a4f99f5c0ada0ff5ac660 114 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 5 98 2.2E-24 T 22-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS SMGD1_RS01285 7582c5329548d01e0cbcc06008adf41a 233 Gene3D G3DSA:1.10.3680.10 105 206 1.5E-7 T 22-04-2016 IPR029024 TerB-like SMGD1_RS01285 7582c5329548d01e0cbcc06008adf41a 233 Pfam PF05099 Tellurite resistance protein TerB 84 201 1.3E-5 T 22-04-2016 IPR007791 Co-chaperone DjlA, N-terminal SMGD1_RS01285 7582c5329548d01e0cbcc06008adf41a 233 SUPERFAMILY SSF158682 104 207 1.26E-8 T 22-04-2016 IPR029024 TerB-like SMGD1_RS05390 61525229d31b293a2df874893d7e0a8f 161 SMART SM00065 19 161 1.4E-15 T 22-04-2016 IPR003018 GAF domain GO:0005515 SMGD1_RS05390 61525229d31b293a2df874893d7e0a8f 161 PANTHER PTHR11347 20 154 3.2E-33 T 22-04-2016 SMGD1_RS05390 61525229d31b293a2df874893d7e0a8f 161 Pfam PF01590 GAF domain 21 150 3.6E-14 T 22-04-2016 IPR003018 GAF domain GO:0005515 SMGD1_RS05390 61525229d31b293a2df874893d7e0a8f 161 Gene3D G3DSA:3.30.450.40 3 156 2.7E-41 T 22-04-2016 IPR029016 GAF domain-like SMGD1_RS05390 61525229d31b293a2df874893d7e0a8f 161 PANTHER PTHR11347:SF82 20 154 3.2E-33 T 22-04-2016 SMGD1_RS05390 61525229d31b293a2df874893d7e0a8f 161 SUPERFAMILY SSF55781 2 160 5.23E-35 T 22-04-2016 IPR029016 GAF domain-like SMGD1_RS04370 0f5a670f58769d7e22048528ca1a4efb 618 Gene3D G3DSA:3.40.50.300 315 332 3.1E-20 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS04370 0f5a670f58769d7e22048528ca1a4efb 618 Gene3D G3DSA:3.40.50.300 397 527 3.1E-20 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS04370 0f5a670f58769d7e22048528ca1a4efb 618 PANTHER PTHR30580 131 618 1.2E-137 T 22-04-2016 SMGD1_RS04370 0f5a670f58769d7e22048528ca1a4efb 618 SMART SM00487 114 301 2.1E-17 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SMGD1_RS04370 0f5a670f58769d7e22048528ca1a4efb 618 Gene3D G3DSA:3.40.50.300 112 279 3.9E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS04370 0f5a670f58769d7e22048528ca1a4efb 618 SUPERFAMILY SSF52540 129 344 1.19E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS04370 0f5a670f58769d7e22048528ca1a4efb 618 SUPERFAMILY SSF52540 407 499 1.19E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS04370 0f5a670f58769d7e22048528ca1a4efb 618 Pfam PF00271 Helicase conserved C-terminal domain 420 493 6.1E-8 T 22-04-2016 IPR001650 Helicase, C-terminal SMGD1_RS04370 0f5a670f58769d7e22048528ca1a4efb 618 SMART SM00490 396 493 1.3E-5 T 22-04-2016 IPR001650 Helicase, C-terminal SMGD1_RS04370 0f5a670f58769d7e22048528ca1a4efb 618 Pfam PF00270 DEAD/DEAH box helicase 122 278 1.8E-9 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SMGD1_RS04370 0f5a670f58769d7e22048528ca1a4efb 618 Hamap MF_00983 Probable primosomal protein N' [priA]. 6 617 19.394 T 22-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 SMGD1_RS04370 0f5a670f58769d7e22048528ca1a4efb 618 TIGRFAM TIGR00595 priA: primosomal protein N' 136 614 1.0E-149 T 22-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 SMGD1_RS09205 9645cd9a23712e8521d77b632880f31a 203 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 1 203 35.156 T 22-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 SMGD1_RS09205 9645cd9a23712e8521d77b632880f31a 203 Gene3D G3DSA:3.40.50.880 1 203 6.5E-82 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SMGD1_RS09205 9645cd9a23712e8521d77b632880f31a 203 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 2 202 4.0E-71 T 22-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 SMGD1_RS09205 9645cd9a23712e8521d77b632880f31a 203 PANTHER PTHR21235:SF1 2 201 1.3E-79 T 22-04-2016 SMGD1_RS09205 9645cd9a23712e8521d77b632880f31a 203 PANTHER PTHR21235 2 201 1.3E-79 T 22-04-2016 SMGD1_RS09205 9645cd9a23712e8521d77b632880f31a 203 PIRSF PIRSF000495 1 203 8.3E-75 T 22-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 SMGD1_RS09205 9645cd9a23712e8521d77b632880f31a 203 Pfam PF00117 Glutamine amidotransferase class-I 4 200 3.4E-20 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 SMGD1_RS09205 9645cd9a23712e8521d77b632880f31a 203 SUPERFAMILY SSF52317 2 202 4.03E-58 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SMGD1_RS14110 1bb73348488f9413ff65588d9cbf44e9 433 SUPERFAMILY SSF53448 6 249 2.25E-52 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMGD1_RS14110 1bb73348488f9413ff65588d9cbf44e9 433 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 5 429 33.801 T 22-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 SMGD1_RS14110 1bb73348488f9413ff65588d9cbf44e9 433 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 7 429 8.7E-144 T 22-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 SMGD1_RS14110 1bb73348488f9413ff65588d9cbf44e9 433 Gene3D G3DSA:3.90.550.10 2 247 7.0E-56 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMGD1_RS14110 1bb73348488f9413ff65588d9cbf44e9 433 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 371 404 1.8E-7 T 22-04-2016 IPR001451 Hexapeptide repeat SMGD1_RS14110 1bb73348488f9413ff65588d9cbf44e9 433 PANTHER PTHR22572 7 426 2.1E-136 T 22-04-2016 SMGD1_RS14110 1bb73348488f9413ff65588d9cbf44e9 433 Pfam PF12804 MobA-like NTP transferase domain 9 120 2.9E-16 T 22-04-2016 IPR025877 MobA-like NTP transferase SMGD1_RS14110 1bb73348488f9413ff65588d9cbf44e9 433 PANTHER PTHR22572:SF115 7 426 2.1E-136 T 22-04-2016 SMGD1_RS14110 1bb73348488f9413ff65588d9cbf44e9 433 SUPERFAMILY SSF51161 252 414 1.18E-31 T 22-04-2016 IPR011004 Trimeric LpxA-like SMGD1_RS14110 1bb73348488f9413ff65588d9cbf44e9 433 Gene3D G3DSA:2.160.10.10 252 414 1.7E-31 T 22-04-2016 SMGD1_RS08220 6e840861776aa8d1ba1b092406cfa343 233 SUPERFAMILY SSF75708 56 232 1.24E-28 T 22-04-2016 SMGD1_RS08220 6e840861776aa8d1ba1b092406cfa343 233 Gene3D G3DSA:1.10.287.500 69 193 2.2E-7 T 22-04-2016 SMGD1_RS03470 24d256df84f43fa642616cb6d218f39e 188 Gene3D G3DSA:3.40.50.2020 39 184 2.8E-10 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SMGD1_RS03470 24d256df84f43fa642616cb6d218f39e 188 SUPERFAMILY SSF53271 90 185 8.86E-13 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SMGD1_RS12120 e24225b7a5f4fdc38fe1aa4e9c8256ee 353 PANTHER PTHR24423 14 166 5.8E-23 T 22-04-2016 SMGD1_RS12120 e24225b7a5f4fdc38fe1aa4e9c8256ee 353 SUPERFAMILY SSF52172 13 159 2.99E-29 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS12120 e24225b7a5f4fdc38fe1aa4e9c8256ee 353 Gene3D G3DSA:3.40.50.2300 12 159 1.3E-29 T 22-04-2016 SMGD1_RS12120 e24225b7a5f4fdc38fe1aa4e9c8256ee 353 Pfam PF00072 Response regulator receiver domain 16 124 3.1E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS12120 e24225b7a5f4fdc38fe1aa4e9c8256ee 353 SMART SM00448 14 125 1.3E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS09405 cbcc1e18074d31b36683259eea8b7bbc 502 SUPERFAMILY SSF52540 199 322 6.47E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS09405 cbcc1e18074d31b36683259eea8b7bbc 502 Gene3D G3DSA:3.40.50.300 199 324 4.5E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS03830 8edd92e211df7663bde1a79a6d3274ac 180 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 10 173 3.7E-36 T 22-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 SMGD1_RS03830 8edd92e211df7663bde1a79a6d3274ac 180 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 9 176 17.922 T 22-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 SMGD1_RS03830 8edd92e211df7663bde1a79a6d3274ac 180 SUPERFAMILY SSF50447 10 88 1.2E-10 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain SMGD1_RS03830 8edd92e211df7663bde1a79a6d3274ac 180 Gene3D G3DSA:2.30.30.240 100 172 3.4E-13 T 22-04-2016 SMGD1_RS03830 8edd92e211df7663bde1a79a6d3274ac 180 Pfam PF01782 RimM N-terminal domain 12 87 1.6E-13 T 22-04-2016 IPR002676 RimM protein GO:0006364 SMGD1_RS03830 8edd92e211df7663bde1a79a6d3274ac 180 Gene3D G3DSA:2.40.30.60 3 88 6.6E-11 T 22-04-2016 IPR002676 RimM protein GO:0006364 SMGD1_RS03830 8edd92e211df7663bde1a79a6d3274ac 180 SUPERFAMILY SSF50346 100 172 4.32E-11 T 22-04-2016 IPR011033 PRC-barrel-like SMGD1_RS09395 c861635bf8960da216e95ed4a033c05c 548 Pfam PF01384 Phosphate transporter family 65 536 2.5E-114 T 22-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 SMGD1_RS09395 c861635bf8960da216e95ed4a033c05c 548 PANTHER PTHR11101 508 546 9.1E-117 T 22-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 SMGD1_RS09395 c861635bf8960da216e95ed4a033c05c 548 PANTHER PTHR11101 37 433 9.1E-117 T 22-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 SMGD1_RS13605 ba34256f4557c9bf65e3764658695e31 794 Gene3D G3DSA:1.20.1640.10 205 408 3.2E-31 T 22-04-2016 SMGD1_RS13605 ba34256f4557c9bf65e3764658695e31 794 Gene3D G3DSA:1.20.1640.10 601 792 5.9E-32 T 22-04-2016 SMGD1_RS13605 ba34256f4557c9bf65e3764658695e31 794 PANTHER PTHR33406:SF2 118 793 2.0E-59 T 22-04-2016 SMGD1_RS13605 ba34256f4557c9bf65e3764658695e31 794 PANTHER PTHR33406:SF2 2 101 2.0E-59 T 22-04-2016 SMGD1_RS13605 ba34256f4557c9bf65e3764658695e31 794 SUPERFAMILY SSF82866 202 399 3.53E-32 T 22-04-2016 SMGD1_RS13605 ba34256f4557c9bf65e3764658695e31 794 SUPERFAMILY SSF82866 598 791 7.19E-35 T 22-04-2016 SMGD1_RS13605 ba34256f4557c9bf65e3764658695e31 794 Pfam PF03176 MMPL family 203 402 5.0E-16 T 22-04-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 SMGD1_RS13605 ba34256f4557c9bf65e3764658695e31 794 Pfam PF03176 MMPL family 608 790 1.3E-11 T 22-04-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 SMGD1_RS13605 ba34256f4557c9bf65e3764658695e31 794 PANTHER PTHR33406 118 793 2.0E-59 T 22-04-2016 SMGD1_RS13605 ba34256f4557c9bf65e3764658695e31 794 PANTHER PTHR33406 2 101 2.0E-59 T 22-04-2016 SMGD1_RS11650 cb9ee95d1f3f7ce2f0766b7d75dd805d 223 Gene3D G3DSA:3.40.50.720 56 133 3.4E-10 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS11650 cb9ee95d1f3f7ce2f0766b7d75dd805d 223 Gene3D G3DSA:3.30.70.1450 142 219 8.9E-9 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SMGD1_RS11650 cb9ee95d1f3f7ce2f0766b7d75dd805d 223 SUPERFAMILY SSF51735 2 133 6.89E-9 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS11650 cb9ee95d1f3f7ce2f0766b7d75dd805d 223 Pfam PF02254 TrkA-N domain 58 109 1.2E-5 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 SMGD1_RS11650 cb9ee95d1f3f7ce2f0766b7d75dd805d 223 SUPERFAMILY SSF116726 134 219 9.16E-9 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SMGD1_RS01830 fa2592d995101d264a7035a22d387acd 247 Pfam PF13614 AAA domain 2 161 3.9E-27 T 22-04-2016 IPR025669 AAA domain SMGD1_RS01830 fa2592d995101d264a7035a22d387acd 247 SUPERFAMILY SSF52540 2 246 3.06E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS01830 fa2592d995101d264a7035a22d387acd 247 Gene3D G3DSA:3.40.50.300 2 246 6.8E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS01830 fa2592d995101d264a7035a22d387acd 247 PANTHER PTHR13696 2 246 7.3E-36 T 22-04-2016 SMGD1_RS01830 fa2592d995101d264a7035a22d387acd 247 PANTHER PTHR13696:SF52 2 246 7.3E-36 T 22-04-2016 SMGD1_RS05830 10fe3ba5ded0af31a5f52ae972679174 432 SUPERFAMILY SSF81296 301 420 8.4E-26 T 22-04-2016 IPR014756 Immunoglobulin E-set SMGD1_RS05830 10fe3ba5ded0af31a5f52ae972679174 432 PANTHER PTHR19372 62 428 1.0E-74 T 22-04-2016 SMGD1_RS05830 10fe3ba5ded0af31a5f52ae972679174 432 PRINTS PR00407 Eukaryotic molybdopterin domain signature 327 341 6.3E-14 T 22-04-2016 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 SMGD1_RS05830 10fe3ba5ded0af31a5f52ae972679174 432 PRINTS PR00407 Eukaryotic molybdopterin domain signature 103 119 6.3E-14 T 22-04-2016 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 SMGD1_RS05830 10fe3ba5ded0af31a5f52ae972679174 432 PRINTS PR00407 Eukaryotic molybdopterin domain signature 384 396 6.3E-14 T 22-04-2016 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 SMGD1_RS05830 10fe3ba5ded0af31a5f52ae972679174 432 PRINTS PR00407 Eukaryotic molybdopterin domain signature 243 256 6.3E-14 T 22-04-2016 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 SMGD1_RS05830 10fe3ba5ded0af31a5f52ae972679174 432 PRINTS PR00407 Eukaryotic molybdopterin domain signature 259 272 6.3E-14 T 22-04-2016 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 SMGD1_RS05830 10fe3ba5ded0af31a5f52ae972679174 432 PRINTS PR00407 Eukaryotic molybdopterin domain signature 226 242 6.3E-14 T 22-04-2016 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 SMGD1_RS05830 10fe3ba5ded0af31a5f52ae972679174 432 Gene3D G3DSA:3.90.420.10 86 293 7.2E-62 T 22-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 SMGD1_RS05830 10fe3ba5ded0af31a5f52ae972679174 432 TIGRFAM TIGR04555 sulfite_DH_soxC: sulfite dehydrogenase 14 428 2.8E-184 T 22-04-2016 IPR030835 Sulfite dehydrogenase SoxC SMGD1_RS05830 10fe3ba5ded0af31a5f52ae972679174 432 Pfam PF03404 Mo-co oxidoreductase dimerisation domain 298 416 3.7E-13 T 22-04-2016 IPR005066 Moybdenum cofactor oxidoreductase, dimerisation GO:0016491|GO:0030151|GO:0055114 SMGD1_RS05830 10fe3ba5ded0af31a5f52ae972679174 432 PANTHER PTHR19372:SF2 62 428 1.0E-74 T 22-04-2016 SMGD1_RS05830 10fe3ba5ded0af31a5f52ae972679174 432 SUPERFAMILY SSF56524 64 290 8.37E-61 T 22-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 SMGD1_RS05830 10fe3ba5ded0af31a5f52ae972679174 432 Gene3D G3DSA:2.60.40.650 301 420 3.1E-21 T 22-04-2016 IPR005066 Moybdenum cofactor oxidoreductase, dimerisation GO:0016491|GO:0030151|GO:0055114 SMGD1_RS05830 10fe3ba5ded0af31a5f52ae972679174 432 Pfam PF00174 Oxidoreductase molybdopterin binding domain 115 275 4.5E-46 T 22-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 SMGD1_RS04915 aa94343f12aee5a915057d92646b215f 105 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 4 102 2.0E-35 T 22-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 SMGD1_RS04915 aa94343f12aee5a915057d92646b215f 105 Gene3D G3DSA:3.90.470.10 2 103 3.1E-29 T 22-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 SMGD1_RS04915 aa94343f12aee5a915057d92646b215f 105 Pfam PF00237 Ribosomal protein L22p/L17e 7 102 1.7E-23 T 22-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 SMGD1_RS04915 aa94343f12aee5a915057d92646b215f 105 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 105 22.852 T 22-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 SMGD1_RS04915 aa94343f12aee5a915057d92646b215f 105 SUPERFAMILY SSF54843 2 103 3.01E-31 T 22-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 SMGD1_RS04915 aa94343f12aee5a915057d92646b215f 105 PANTHER PTHR13501 2 103 1.6E-28 T 22-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 SMGD1_RS00455 fdcdaad222eac75cd861015a3b104e25 264 SMART SM00880 12 261 1.1E-5 T 22-04-2016 IPR007899 CHAD domain SMGD1_RS00455 fdcdaad222eac75cd861015a3b104e25 264 Pfam PF05235 CHAD domain 21 227 9.2E-25 T 22-04-2016 IPR007899 CHAD domain SMGD1_RS04555 72093185e3934aa9c43a6cc298bd9c9f 106 PANTHER PTHR10438 1 99 4.1E-13 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 SMGD1_RS04555 72093185e3934aa9c43a6cc298bd9c9f 106 SUPERFAMILY SSF52833 3 103 3.67E-21 T 22-04-2016 IPR012336 Thioredoxin-like fold SMGD1_RS04555 72093185e3934aa9c43a6cc298bd9c9f 106 PANTHER PTHR10438:SF292 1 99 4.1E-13 T 22-04-2016 SMGD1_RS04555 72093185e3934aa9c43a6cc298bd9c9f 106 Gene3D G3DSA:3.40.30.10 4 99 5.4E-18 T 22-04-2016 IPR012336 Thioredoxin-like fold SMGD1_RS04555 72093185e3934aa9c43a6cc298bd9c9f 106 Pfam PF00085 Thioredoxin 5 98 6.3E-13 T 22-04-2016 IPR013766 Thioredoxin domain GO:0045454 SMGD1_RS03045 b8239256d5cf6e85267c3c2707000361 261 PANTHER PTHR30457 3 260 6.3E-77 T 22-04-2016 SMGD1_RS03045 b8239256d5cf6e85267c3c2707000361 261 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 5 261 35.209 T 22-04-2016 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 SMGD1_RS03045 b8239256d5cf6e85267c3c2707000361 261 SUPERFAMILY SSF64167 6 260 9.94E-72 T 22-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 SMGD1_RS03045 b8239256d5cf6e85267c3c2707000361 261 Pfam PF01975 Survival protein SurE 7 193 1.0E-52 T 22-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 SMGD1_RS03045 b8239256d5cf6e85267c3c2707000361 261 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 6 247 1.2E-62 T 22-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 SMGD1_RS03045 b8239256d5cf6e85267c3c2707000361 261 Gene3D G3DSA:3.40.1210.10 5 260 2.3E-78 T 22-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 SMGD1_RS06300 a9b18fdd9aaac56aaea6838e780af1f7 364 SUPERFAMILY SSF58104 66 262 7.85E-48 T 22-04-2016 SMGD1_RS06300 a9b18fdd9aaac56aaea6838e780af1f7 364 SMART SM00283 50 279 4.3E-23 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SMGD1_RS06300 a9b18fdd9aaac56aaea6838e780af1f7 364 Gene3D G3DSA:1.10.287.950 61 238 1.0E-44 T 22-04-2016 SMGD1_RS06300 a9b18fdd9aaac56aaea6838e780af1f7 364 PANTHER PTHR32089:SF1 75 228 8.6E-43 T 22-04-2016 SMGD1_RS06300 a9b18fdd9aaac56aaea6838e780af1f7 364 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 170 199 9.0E-5 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SMGD1_RS06300 a9b18fdd9aaac56aaea6838e780af1f7 364 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 71 100 9.0E-5 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SMGD1_RS06300 a9b18fdd9aaac56aaea6838e780af1f7 364 Pfam PF13682 Chemoreceptor zinc-binding domain 260 320 4.0E-11 T 22-04-2016 IPR025991 Chemoreceptor zinc-binding domain UniPathway: UPA00599 SMGD1_RS06300 a9b18fdd9aaac56aaea6838e780af1f7 364 PANTHER PTHR32089 75 228 8.6E-43 T 22-04-2016 SMGD1_RS06300 a9b18fdd9aaac56aaea6838e780af1f7 364 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 113 231 8.9E-36 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SMGD1_RS12170 0e2809e2aa3913400fa043909f2c8065 579 Pfam PF01568 Molydopterin dinucleotide binding domain 510 560 1.5E-5 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 SMGD1_RS12170 0e2809e2aa3913400fa043909f2c8065 579 SUPERFAMILY SSF50692 478 579 1.7E-10 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain SMGD1_RS12170 0e2809e2aa3913400fa043909f2c8065 579 PANTHER PTHR11615 7 407 4.1E-26 T 22-04-2016 SMGD1_RS12170 0e2809e2aa3913400fa043909f2c8065 579 Gene3D G3DSA:3.40.228.10 113 283 1.6E-30 T 22-04-2016 SMGD1_RS12170 0e2809e2aa3913400fa043909f2c8065 579 Gene3D G3DSA:3.40.50.740 59 112 7.5E-16 T 22-04-2016 SMGD1_RS12170 0e2809e2aa3913400fa043909f2c8065 579 Gene3D G3DSA:3.40.50.740 284 424 7.5E-16 T 22-04-2016 SMGD1_RS12170 0e2809e2aa3913400fa043909f2c8065 579 Pfam PF00384 Molybdopterin oxidoreductase 123 402 2.9E-21 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 SMGD1_RS12170 0e2809e2aa3913400fa043909f2c8065 579 Gene3D G3DSA:2.40.40.20 510 579 6.9E-6 T 22-04-2016 SMGD1_RS12170 0e2809e2aa3913400fa043909f2c8065 579 PANTHER PTHR11615:SF127 7 407 4.1E-26 T 22-04-2016 SMGD1_RS12170 0e2809e2aa3913400fa043909f2c8065 579 SUPERFAMILY SSF53706 5 471 4.32E-61 T 22-04-2016 SMGD1_RS07415 f11484e503b94082a8fc55696e5ae681 514 Gene3D G3DSA:3.60.110.10 222 508 1.7E-58 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 SMGD1_RS07415 f11484e503b94082a8fc55696e5ae681 514 Pfam PF00795 Carbon-nitrogen hydrolase 237 490 1.1E-33 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 SMGD1_RS07415 f11484e503b94082a8fc55696e5ae681 514 PANTHER PTHR23088 213 513 6.1E-141 T 22-04-2016 SMGD1_RS07415 f11484e503b94082a8fc55696e5ae681 514 SUPERFAMILY SSF55729 11 146 9.17E-12 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMGD1_RS07415 f11484e503b94082a8fc55696e5ae681 514 SUPERFAMILY SSF56317 227 493 3.4E-58 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 SMGD1_RS07415 f11484e503b94082a8fc55696e5ae681 514 Gene3D G3DSA:3.40.630.30 15 191 4.0E-14 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMGD1_RS07415 f11484e503b94082a8fc55696e5ae681 514 Pfam PF00583 Acetyltransferase (GNAT) family 62 151 1.9E-5 T 22-04-2016 IPR000182 GNAT domain GO:0008080 SMGD1_RS07415 f11484e503b94082a8fc55696e5ae681 514 PANTHER PTHR23088:SF12 213 513 6.1E-141 T 22-04-2016 SMGD1_RS00810 e47e6fbdbc5246dfb65493e895276584 198 Pfam PF13649 Methyltransferase domain 41 131 9.2E-14 T 22-04-2016 SMGD1_RS00810 e47e6fbdbc5246dfb65493e895276584 198 SUPERFAMILY SSF53335 3 198 1.53E-32 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS00810 e47e6fbdbc5246dfb65493e895276584 198 Gene3D G3DSA:3.40.50.150 26 181 7.1E-26 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS00810 e47e6fbdbc5246dfb65493e895276584 198 PANTHER PTHR10108 11 174 6.9E-16 T 22-04-2016 SMGD1_RS00810 e47e6fbdbc5246dfb65493e895276584 198 PANTHER PTHR10108:SF933 11 174 6.9E-16 T 22-04-2016 SMGD1_RS02095 3b59543cbdd745370296378311a4e0f8 221 SUPERFAMILY SSF52141 2 220 3.71E-87 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like SMGD1_RS02095 3b59543cbdd745370296378311a4e0f8 221 SMART SM00987 48 208 4.0E-34 T 22-04-2016 SMGD1_RS02095 3b59543cbdd745370296378311a4e0f8 221 SMART SM00986 48 208 4.0E-34 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like SMGD1_RS02095 3b59543cbdd745370296378311a4e0f8 221 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 56 65 - T 22-04-2016 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 SMGD1_RS02095 3b59543cbdd745370296378311a4e0f8 221 PANTHER PTHR11264 1 220 1.1E-118 T 22-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 SMGD1_RS02095 3b59543cbdd745370296378311a4e0f8 221 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 5 213 3.3E-80 T 22-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 SMGD1_RS02095 3b59543cbdd745370296378311a4e0f8 221 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 4 219 39.435 T 22-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 SMGD1_RS02095 3b59543cbdd745370296378311a4e0f8 221 Gene3D G3DSA:3.40.470.10 3 220 1.0E-92 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like SMGD1_RS02095 3b59543cbdd745370296378311a4e0f8 221 Pfam PF03167 Uracil DNA glycosylase superfamily 51 207 1.7E-21 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like SMGD1_RS02500 e87a9263b0d6b27f2174ace8344ae9ac 94 SUPERFAMILY SSF46689 1 91 1.79E-20 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SMGD1_RS02500 e87a9263b0d6b27f2174ace8344ae9ac 94 Pfam PF01527 Transposase 5 72 3.5E-15 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SMGD1_RS02500 e87a9263b0d6b27f2174ace8344ae9ac 94 PANTHER PTHR33215 1 90 1.4E-21 T 22-04-2016 SMGD1_RS02500 e87a9263b0d6b27f2174ace8344ae9ac 94 Gene3D G3DSA:1.10.10.60 7 88 4.4E-22 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SMGD1_RS02295 e87a9263b0d6b27f2174ace8344ae9ac 94 SUPERFAMILY SSF46689 1 91 1.79E-20 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SMGD1_RS02295 e87a9263b0d6b27f2174ace8344ae9ac 94 Pfam PF01527 Transposase 5 72 3.5E-15 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SMGD1_RS02295 e87a9263b0d6b27f2174ace8344ae9ac 94 PANTHER PTHR33215 1 90 1.4E-21 T 22-04-2016 SMGD1_RS02295 e87a9263b0d6b27f2174ace8344ae9ac 94 Gene3D G3DSA:1.10.10.60 7 88 4.4E-22 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SMGD1_RS05880 4fa5c204744196501edcb07090a3add9 226 Pfam PF00035 Double-stranded RNA binding motif 157 222 1.5E-13 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain SMGD1_RS05880 4fa5c204744196501edcb07090a3add9 226 SMART SM00535 20 149 7.0E-47 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 SMGD1_RS05880 4fa5c204744196501edcb07090a3add9 226 SMART SM00358 156 223 2.9E-18 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain SMGD1_RS05880 4fa5c204744196501edcb07090a3add9 226 Gene3D G3DSA:3.30.160.20 155 221 1.9E-25 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain SMGD1_RS05880 4fa5c204744196501edcb07090a3add9 226 Pfam PF14622 Ribonuclease-III-like 18 135 9.9E-35 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 SMGD1_RS05880 4fa5c204744196501edcb07090a3add9 226 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 9 221 5.8E-71 T 22-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 SMGD1_RS05880 4fa5c204744196501edcb07090a3add9 226 ProSitePatterns PS00517 Ribonuclease III family signature. 38 46 - T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 SMGD1_RS05880 4fa5c204744196501edcb07090a3add9 226 SUPERFAMILY SSF54768 110 223 4.09E-22 T 22-04-2016 SMGD1_RS05880 4fa5c204744196501edcb07090a3add9 226 Gene3D G3DSA:1.10.1520.10 4 149 9.2E-45 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 SMGD1_RS05880 4fa5c204744196501edcb07090a3add9 226 SUPERFAMILY SSF69065 2 158 1.15E-45 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 SMGD1_RS05880 4fa5c204744196501edcb07090a3add9 226 Hamap MF_00104 Ribonuclease 3 [rnc]. 8 219 29.228 T 22-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 SMGD1_RS05880 4fa5c204744196501edcb07090a3add9 226 PANTHER PTHR11207 1 223 7.4E-70 T 22-04-2016 SMGD1_RS09935 dafe9186e8994e6cfcf734c566d7295a 94 SUPERFAMILY SSF55008 2 65 1.96E-6 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SMGD1_RS09935 dafe9186e8994e6cfcf734c566d7295a 94 Pfam PF00403 Heavy-metal-associated domain 9 63 2.8E-6 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SMGD1_RS09935 dafe9186e8994e6cfcf734c566d7295a 94 Gene3D G3DSA:3.30.70.100 2 49 6.8E-6 T 22-04-2016 SMGD1_RS07630 e9f5d2c7ffea37740ef3f6ae04bf7715 499 Gene3D G3DSA:3.40.190.10 135 270 1.8E-36 T 22-04-2016 SMGD1_RS07630 e9f5d2c7ffea37740ef3f6ae04bf7715 499 Gene3D G3DSA:3.90.76.10 49 134 7.3E-20 T 22-04-2016 SMGD1_RS07630 e9f5d2c7ffea37740ef3f6ae04bf7715 499 PIRSF PIRSF002741 15 499 9.4E-132 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 SMGD1_RS07630 e9f5d2c7ffea37740ef3f6ae04bf7715 499 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 60 417 2.5E-78 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain SMGD1_RS07630 e9f5d2c7ffea37740ef3f6ae04bf7715 499 Gene3D G3DSA:3.10.105.10 271 467 9.3E-56 T 22-04-2016 SMGD1_RS07630 e9f5d2c7ffea37740ef3f6ae04bf7715 499 PANTHER PTHR30290:SF9 16 497 1.5E-121 T 22-04-2016 SMGD1_RS07630 e9f5d2c7ffea37740ef3f6ae04bf7715 499 SUPERFAMILY SSF53850 16 497 1.23E-126 T 22-04-2016 SMGD1_RS07630 e9f5d2c7ffea37740ef3f6ae04bf7715 499 PANTHER PTHR30290 16 497 1.5E-121 T 22-04-2016 SMGD1_RS06555 e1cf16eeb69ccbd22fcac47b80353fc6 370 Gene3D G3DSA:1.10.287.950 68 251 8.8E-47 T 22-04-2016 SMGD1_RS06555 e1cf16eeb69ccbd22fcac47b80353fc6 370 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 116 249 1.9E-35 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SMGD1_RS06555 e1cf16eeb69ccbd22fcac47b80353fc6 370 SMART SM00283 41 259 6.7E-15 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SMGD1_RS06555 e1cf16eeb69ccbd22fcac47b80353fc6 370 Pfam PF13682 Chemoreceptor zinc-binding domain 260 325 1.7E-12 T 22-04-2016 IPR025991 Chemoreceptor zinc-binding domain UniPathway: UPA00599 SMGD1_RS06555 e1cf16eeb69ccbd22fcac47b80353fc6 370 SUPERFAMILY SSF58104 71 250 5.75E-48 T 22-04-2016 SMGD1_RS06555 e1cf16eeb69ccbd22fcac47b80353fc6 370 PANTHER PTHR32089 112 251 1.6E-43 T 22-04-2016 SMGD1_RS08085 4027053a493b1fca846e9bf0d7937f1c 296 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 40 265 6.1E-114 T 22-04-2016 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 SMGD1_RS08085 4027053a493b1fca846e9bf0d7937f1c 296 SUPERFAMILY SSF52540 72 257 3.2E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS08085 4027053a493b1fca846e9bf0d7937f1c 296 PANTHER PTHR34383 10 260 1.1E-124 T 22-04-2016 SMGD1_RS08085 4027053a493b1fca846e9bf0d7937f1c 296 PANTHER PTHR34383:SF1 10 260 1.1E-124 T 22-04-2016 SMGD1_RS08085 4027053a493b1fca846e9bf0d7937f1c 296 PIRSF PIRSF028756 2 290 3.6E-113 T 22-04-2016 IPR016898 Polyphosphate kinase 2 SMGD1_RS08085 4027053a493b1fca846e9bf0d7937f1c 296 Gene3D G3DSA:3.40.50.300 7 265 7.7E-99 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS08085 4027053a493b1fca846e9bf0d7937f1c 296 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 41 263 1.4E-100 T 22-04-2016 IPR022488 Polyphosphate kinase-2-related SMGD1_RS06415 433bca811f12646bd0b2e84c996c49d3 70 Pfam PF01165 Ribosomal protein S21 4 56 1.7E-12 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 SMGD1_RS06415 433bca811f12646bd0b2e84c996c49d3 70 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 3 59 6.5E-15 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 SMGD1_RS06415 433bca811f12646bd0b2e84c996c49d3 70 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 16.112 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 SMGD1_RS06415 433bca811f12646bd0b2e84c996c49d3 70 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 4.6E-6 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 SMGD1_RS06415 433bca811f12646bd0b2e84c996c49d3 70 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 4.6E-6 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 SMGD1_RS06415 433bca811f12646bd0b2e84c996c49d3 70 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 4.6E-6 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 SMGD1_RS06415 433bca811f12646bd0b2e84c996c49d3 70 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 4.6E-6 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 SMGD1_RS06415 433bca811f12646bd0b2e84c996c49d3 70 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 17 43 6.0E-8 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 SMGD1_RS02470 e3917519bf4f65cfca1b6667908c4457 199 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 7 189 5.0E-80 T 22-04-2016 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: REACT_13433|UniPathway: UPA00140 SMGD1_RS02470 e3917519bf4f65cfca1b6667908c4457 199 Pfam PF01583 Adenylylsulphate kinase 24 176 1.6E-69 T 22-04-2016 SMGD1_RS02470 e3917519bf4f65cfca1b6667908c4457 199 SUPERFAMILY SSF52540 22 191 2.78E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS02470 e3917519bf4f65cfca1b6667908c4457 199 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 23 195 36.779 T 22-04-2016 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: REACT_13433|UniPathway: UPA00140 SMGD1_RS02470 e3917519bf4f65cfca1b6667908c4457 199 PANTHER PTHR11055 1 198 4.0E-118 T 22-04-2016 SMGD1_RS02470 e3917519bf4f65cfca1b6667908c4457 199 Gene3D G3DSA:3.40.50.300 1 198 3.0E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS09375 4e434ec432b556c8dd0678dffb5927be 182 Pfam PF12163 DNA replication regulator 1 180 8.0E-74 T 22-04-2016 IPR021011 DNA replication regulator, HobA SMGD1_RS06420 964dd0957167eb5ad450429a65333743 552 SUPERFAMILY SSF57783 1 97 1.02E-37 T 22-04-2016 SMGD1_RS06420 964dd0957167eb5ad450429a65333743 552 SUPERFAMILY SSF56731 107 401 3.53E-85 T 22-04-2016 SMGD1_RS06420 964dd0957167eb5ad450429a65333743 552 Pfam PF01807 CHC2 zinc finger 3 97 5.8E-39 T 22-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 SMGD1_RS06420 964dd0957167eb5ad450429a65333743 552 Gene3D G3DSA:3.40.1360.10 226 348 9.1E-38 T 22-04-2016 SMGD1_RS06420 964dd0957167eb5ad450429a65333743 552 SMART SM00493 244 315 1.2E-20 T 22-04-2016 IPR006171 Toprim domain SMGD1_RS06420 964dd0957167eb5ad450429a65333743 552 Pfam PF13662 Toprim domain 244 318 3.6E-18 T 22-04-2016 IPR006171 Toprim domain SMGD1_RS06420 964dd0957167eb5ad450429a65333743 552 TIGRFAM TIGR01391 dnaG: DNA primase 1 399 4.1E-133 T 22-04-2016 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 SMGD1_RS06420 964dd0957167eb5ad450429a65333743 552 Pfam PF08275 DNA primase catalytic core, N-terminal domain 115 237 2.4E-34 T 22-04-2016 IPR013264 DNA primase, catalytic core, N-terminal SMGD1_RS06420 964dd0957167eb5ad450429a65333743 552 Gene3D G3DSA:3.90.980.10 107 225 3.3E-32 T 22-04-2016 IPR013264 DNA primase, catalytic core, N-terminal SMGD1_RS06420 964dd0957167eb5ad450429a65333743 552 PANTHER PTHR30313 1 401 2.6E-120 T 22-04-2016 SMGD1_RS06420 964dd0957167eb5ad450429a65333743 552 SMART SM00400 33 87 5.3E-33 T 22-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 SMGD1_RS06420 964dd0957167eb5ad450429a65333743 552 Gene3D G3DSA:3.90.580.10 1 98 1.2E-39 T 22-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 SMGD1_RS06420 964dd0957167eb5ad450429a65333743 552 Hamap MF_00974 DNA primase [dnaG]. 1 536 25.833 T 22-04-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 SMGD1_RS06420 964dd0957167eb5ad450429a65333743 552 Pfam PF16730 DnaG-primase C-terminal, helicase-binding domain 431 549 1.6E-43 T 22-04-2016 IPR031988 DNA primase DnaG, C-terminal helicase-binding domain SMGD1_RS06420 964dd0957167eb5ad450429a65333743 552 PIRSF PIRSF002811 1 549 1.2E-144 T 22-04-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 SMGD1_RS06365 42fa2d90dc04ce4cd2bfdf623e1442b1 359 PRINTS PR01486 Bacterial phospholipase A1 protein signature 226 240 1.3E-25 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 SMGD1_RS06365 42fa2d90dc04ce4cd2bfdf623e1442b1 359 PRINTS PR01486 Bacterial phospholipase A1 protein signature 241 259 1.3E-25 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 SMGD1_RS06365 42fa2d90dc04ce4cd2bfdf623e1442b1 359 PRINTS PR01486 Bacterial phospholipase A1 protein signature 274 292 1.3E-25 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 SMGD1_RS06365 42fa2d90dc04ce4cd2bfdf623e1442b1 359 PRINTS PR01486 Bacterial phospholipase A1 protein signature 196 215 1.3E-25 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 SMGD1_RS06365 42fa2d90dc04ce4cd2bfdf623e1442b1 359 PRINTS PR01486 Bacterial phospholipase A1 protein signature 175 191 1.3E-25 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 SMGD1_RS06365 42fa2d90dc04ce4cd2bfdf623e1442b1 359 PRINTS PR01486 Bacterial phospholipase A1 protein signature 153 170 1.3E-25 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 SMGD1_RS06365 42fa2d90dc04ce4cd2bfdf623e1442b1 359 PRINTS PR01486 Bacterial phospholipase A1 protein signature 330 350 1.3E-25 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 SMGD1_RS06365 42fa2d90dc04ce4cd2bfdf623e1442b1 359 SMART SM00671 48 83 9.3E-5 T 22-04-2016 IPR006597 Sel1-like repeat SMGD1_RS06365 42fa2d90dc04ce4cd2bfdf623e1442b1 359 Gene3D G3DSA:2.40.230.10 112 359 8.0E-71 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 SMGD1_RS06365 42fa2d90dc04ce4cd2bfdf623e1442b1 359 SUPERFAMILY SSF56931 113 358 4.05E-69 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 SMGD1_RS06365 42fa2d90dc04ce4cd2bfdf623e1442b1 359 Gene3D G3DSA:1.25.40.10 24 84 5.3E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS06365 42fa2d90dc04ce4cd2bfdf623e1442b1 359 SUPERFAMILY SSF81901 11 85 2.75E-8 T 22-04-2016 SMGD1_RS06365 42fa2d90dc04ce4cd2bfdf623e1442b1 359 Pfam PF02253 Phospholipase A1 118 357 1.1E-69 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 SMGD1_RS06365 42fa2d90dc04ce4cd2bfdf623e1442b1 359 PANTHER PTHR40457 117 359 5.9E-46 T 22-04-2016 SMGD1_RS07460 58c0647df6c5850da4b9a0ff4a420ed7 633 Gene3D G3DSA:3.30.70.270 208 372 2.5E-52 T 22-04-2016 SMGD1_RS07460 58c0647df6c5850da4b9a0ff4a420ed7 633 Pfam PF00563 EAL domain 384 619 7.9E-69 T 22-04-2016 IPR001633 EAL domain SMGD1_RS07460 58c0647df6c5850da4b9a0ff4a420ed7 633 SUPERFAMILY SSF141868 384 632 7.06E-81 T 22-04-2016 IPR001633 EAL domain SMGD1_RS07460 58c0647df6c5850da4b9a0ff4a420ed7 633 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 203 366 8.2E-48 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS07460 58c0647df6c5850da4b9a0ff4a420ed7 633 SMART SM00267 196 368 5.4E-58 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS07460 58c0647df6c5850da4b9a0ff4a420ed7 633 SUPERFAMILY SSF55073 212 370 8.63E-48 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS07460 58c0647df6c5850da4b9a0ff4a420ed7 633 PANTHER PTHR10799 593 612 3.3E-71 T 22-04-2016 SMGD1_RS07460 58c0647df6c5850da4b9a0ff4a420ed7 633 PANTHER PTHR10799 240 458 3.3E-71 T 22-04-2016 SMGD1_RS07460 58c0647df6c5850da4b9a0ff4a420ed7 633 PANTHER PTHR10799 14 190 3.3E-71 T 22-04-2016 SMGD1_RS07460 58c0647df6c5850da4b9a0ff4a420ed7 633 SMART SM00052 378 625 1.2E-101 T 22-04-2016 IPR001633 EAL domain SMGD1_RS07460 58c0647df6c5850da4b9a0ff4a420ed7 633 PANTHER PTHR10799:SF774 593 612 3.3E-71 T 22-04-2016 SMGD1_RS07460 58c0647df6c5850da4b9a0ff4a420ed7 633 PANTHER PTHR10799:SF774 240 458 3.3E-71 T 22-04-2016 SMGD1_RS07460 58c0647df6c5850da4b9a0ff4a420ed7 633 PANTHER PTHR10799:SF774 14 190 3.3E-71 T 22-04-2016 SMGD1_RS07460 58c0647df6c5850da4b9a0ff4a420ed7 633 Gene3D G3DSA:3.20.20.450 382 632 6.3E-89 T 22-04-2016 IPR001633 EAL domain SMGD1_RS07460 58c0647df6c5850da4b9a0ff4a420ed7 633 Pfam PF00990 Diguanylate cyclase, GGDEF domain 208 363 1.3E-48 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS10585 5567f1ba0722e5bcbe51ef4965f28f35 141 Pfam PF04773 FecR protein 52 139 6.6E-11 T 22-04-2016 IPR006860 FecR protein SMGD1_RS11770 a3cd455e86e6af3f6bc0bac90a9cad3e 218 Pfam PF00027 Cyclic nucleotide-binding domain 31 116 6.7E-7 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain SMGD1_RS11770 a3cd455e86e6af3f6bc0bac90a9cad3e 218 Gene3D G3DSA:2.60.120.10 9 141 1.9E-17 T 22-04-2016 IPR014710 RmlC-like jelly roll fold SMGD1_RS11770 a3cd455e86e6af3f6bc0bac90a9cad3e 218 SMART SM00100 12 132 0.0041 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain SMGD1_RS11770 a3cd455e86e6af3f6bc0bac90a9cad3e 218 SUPERFAMILY SSF46785 151 216 9.78E-9 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMGD1_RS11770 a3cd455e86e6af3f6bc0bac90a9cad3e 218 SUPERFAMILY SSF51206 7 139 2.09E-19 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like SMGD1_RS11770 a3cd455e86e6af3f6bc0bac90a9cad3e 218 Gene3D G3DSA:1.10.10.10 167 215 6.3E-9 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMGD1_RS11770 a3cd455e86e6af3f6bc0bac90a9cad3e 218 PANTHER PTHR24567 7 218 7.4E-19 T 22-04-2016 SMGD1_RS11770 a3cd455e86e6af3f6bc0bac90a9cad3e 218 Pfam PF13545 Crp-like helix-turn-helix domain 167 215 6.0E-8 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 SMGD1_RS09235 751904722d3305bcd77f3c10631bb1c3 239 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 17 179 1.9E-51 T 22-04-2016 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 SMGD1_RS09235 751904722d3305bcd77f3c10631bb1c3 239 PANTHER PTHR15362:SF5 7 239 1.5E-28 T 22-04-2016 SMGD1_RS09235 751904722d3305bcd77f3c10631bb1c3 239 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 53 75 - T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 SMGD1_RS09235 751904722d3305bcd77f3c10631bb1c3 239 Pfam PF01066 CDP-alcohol phosphatidyltransferase 11 75 3.4E-15 T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 SMGD1_RS09235 751904722d3305bcd77f3c10631bb1c3 239 PANTHER PTHR15362 7 239 1.5E-28 T 22-04-2016 SMGD1_RS00925 32b638c0e433db81bc1329dbe7e860b4 721 SUPERFAMILY SSF56645 42 311 2.62E-39 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 SMGD1_RS00925 32b638c0e433db81bc1329dbe7e860b4 721 PANTHER PTHR10909 40 475 6.9E-177 T 22-04-2016 SMGD1_RS00925 32b638c0e433db81bc1329dbe7e860b4 721 Gene3D G3DSA:1.20.140.10 290 449 4.4E-18 T 22-04-2016 SMGD1_RS00925 32b638c0e433db81bc1329dbe7e860b4 721 Gene3D G3DSA:1.10.540.10 41 179 1.8E-29 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 SMGD1_RS00925 32b638c0e433db81bc1329dbe7e860b4 721 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 302 449 1.2E-10 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 SMGD1_RS00925 32b638c0e433db81bc1329dbe7e860b4 721 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 83 177 2.9E-17 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 SMGD1_RS00925 32b638c0e433db81bc1329dbe7e860b4 721 PANTHER PTHR10909:SF283 40 475 6.9E-177 T 22-04-2016 SMGD1_RS00925 32b638c0e433db81bc1329dbe7e860b4 721 Pfam PF09317 Domain of unknown function (DUF1974) 456 688 7.1E-63 T 22-04-2016 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.99.-|KEGG: 00280+1.3.99.-|KEGG: 00281+1.3.99.-|KEGG: 00362+1.3.99.-|KEGG: 00626+1.3.99.-|KEGG: 00930+1.3.99.-|UniPathway: UPA00659 SMGD1_RS00925 32b638c0e433db81bc1329dbe7e860b4 721 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 182 272 1.1E-10 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 SMGD1_RS00925 32b638c0e433db81bc1329dbe7e860b4 721 SUPERFAMILY SSF47203 302 449 3.54E-20 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 SMGD1_RS00925 32b638c0e433db81bc1329dbe7e860b4 721 Gene3D G3DSA:2.40.110.10 182 289 8.1E-14 T 22-04-2016 SMGD1_RS01970 f7e938fe63436a7e96d02ffd3d0f2174 762 Gene3D G3DSA:2.40.40.20 605 723 6.7E-39 T 22-04-2016 SMGD1_RS01970 f7e938fe63436a7e96d02ffd3d0f2174 762 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 41 58 - T 22-04-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 SMGD1_RS01970 f7e938fe63436a7e96d02ffd3d0f2174 762 Gene3D G3DSA:3.40.50.740 96 292 7.5E-46 T 22-04-2016 SMGD1_RS01970 f7e938fe63436a7e96d02ffd3d0f2174 762 SMART SM00926 36 90 4.7E-20 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 SMGD1_RS01970 f7e938fe63436a7e96d02ffd3d0f2174 762 Gene3D G3DSA:3.40.50.740 293 596 7.2E-65 T 22-04-2016 SMGD1_RS01970 f7e938fe63436a7e96d02ffd3d0f2174 762 Gene3D G3DSA:2.20.25.90 35 95 5.6E-22 T 22-04-2016 SMGD1_RS01970 f7e938fe63436a7e96d02ffd3d0f2174 762 PANTHER PTHR11615 35 743 6.0E-197 T 22-04-2016 SMGD1_RS01970 f7e938fe63436a7e96d02ffd3d0f2174 762 Pfam PF00384 Molybdopterin oxidoreductase 93 516 2.9E-84 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 SMGD1_RS01970 f7e938fe63436a7e96d02ffd3d0f2174 762 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 37 89 1.9E-16 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 SMGD1_RS01970 f7e938fe63436a7e96d02ffd3d0f2174 762 Pfam PF01568 Molydopterin dinucleotide binding domain 613 719 5.4E-26 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 SMGD1_RS01970 f7e938fe63436a7e96d02ffd3d0f2174 762 SUPERFAMILY SSF50692 585 723 6.01E-36 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain SMGD1_RS01970 f7e938fe63436a7e96d02ffd3d0f2174 762 PANTHER PTHR11615:SF119 35 743 6.0E-197 T 22-04-2016 SMGD1_RS01970 f7e938fe63436a7e96d02ffd3d0f2174 762 SUPERFAMILY SSF53706 33 615 9.55E-180 T 22-04-2016 SMGD1_RS11890 2db0fcee16644114072278356a05a788 464 SUPERFAMILY SSF81340 7 413 6.02E-84 T 22-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 SMGD1_RS11890 2db0fcee16644114072278356a05a788 464 PANTHER PTHR11689:SF14 6 379 1.4E-33 T 22-04-2016 SMGD1_RS11890 2db0fcee16644114072278356a05a788 464 Gene3D G3DSA:1.10.3080.10 5 414 3.6E-64 T 22-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 SMGD1_RS11890 2db0fcee16644114072278356a05a788 464 PRINTS PR00762 Chloride channel signature 154 173 4.1E-19 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 SMGD1_RS11890 2db0fcee16644114072278356a05a788 464 PRINTS PR00762 Chloride channel signature 103 122 4.1E-19 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 SMGD1_RS11890 2db0fcee16644114072278356a05a788 464 PRINTS PR00762 Chloride channel signature 351 367 4.1E-19 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 SMGD1_RS11890 2db0fcee16644114072278356a05a788 464 PRINTS PR00762 Chloride channel signature 323 343 4.1E-19 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 SMGD1_RS11890 2db0fcee16644114072278356a05a788 464 PANTHER PTHR11689 6 379 1.4E-33 T 22-04-2016 SMGD1_RS11890 2db0fcee16644114072278356a05a788 464 Pfam PF00654 Voltage gated chloride channel 63 399 7.5E-74 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 SMGD1_RS14270 539d396821d63973c0348d6097861f54 422 SUPERFAMILY SSF102645 176 421 1.15E-53 T 22-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 SMGD1_RS14270 539d396821d63973c0348d6097861f54 422 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 278 394 1.5E-21 T 22-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 SMGD1_RS14270 539d396821d63973c0348d6097861f54 422 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 191 268 7.4E-23 T 22-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 SMGD1_RS14270 539d396821d63973c0348d6097861f54 422 Gene3D G3DSA:3.40.50.10300 188 421 8.7E-57 T 22-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 SMGD1_RS14270 539d396821d63973c0348d6097861f54 422 SUPERFAMILY SSF52507 7 181 3.01E-51 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 SMGD1_RS14270 539d396821d63973c0348d6097861f54 422 Pfam PF02441 Flavoprotein 11 138 1.6E-36 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 SMGD1_RS14270 539d396821d63973c0348d6097861f54 422 PANTHER PTHR14359 292 419 2.2E-94 T 22-04-2016 SMGD1_RS14270 539d396821d63973c0348d6097861f54 422 PANTHER PTHR14359 1 269 2.2E-94 T 22-04-2016 SMGD1_RS14270 539d396821d63973c0348d6097861f54 422 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 8 418 3.9E-112 T 22-04-2016 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|UniPathway: UPA00241|UniPathway: UPA00241 SMGD1_RS14270 539d396821d63973c0348d6097861f54 422 PANTHER PTHR14359:SF20 292 419 2.2E-94 T 22-04-2016 SMGD1_RS14270 539d396821d63973c0348d6097861f54 422 PANTHER PTHR14359:SF20 1 269 2.2E-94 T 22-04-2016 SMGD1_RS14270 539d396821d63973c0348d6097861f54 422 Gene3D G3DSA:3.40.50.1950 9 184 3.3E-58 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 SMGD1_RS05755 d9904c94e704b3f843654356317625c3 279 Pfam PF12833 Helix-turn-helix domain 185 259 9.4E-10 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SMGD1_RS05755 d9904c94e704b3f843654356317625c3 279 Gene3D G3DSA:1.10.10.60 164 211 1.7E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SMGD1_RS05755 d9904c94e704b3f843654356317625c3 279 SMART SM00342 178 259 1.3E-4 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SMGD1_RS05755 d9904c94e704b3f843654356317625c3 279 SUPERFAMILY SSF46689 164 211 5.82E-5 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SMGD1_RS14480 ba3d86cbad0885f4de3701ca1680b4df 515 SUPERFAMILY SSF55874 362 506 1.96E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS14480 ba3d86cbad0885f4de3701ca1680b4df 515 SMART SM00387 398 510 5.4E-22 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS14480 ba3d86cbad0885f4de3701ca1680b4df 515 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 400 509 8.1E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS14480 ba3d86cbad0885f4de3701ca1680b4df 515 Pfam PF11845 Protein of unknown function (DUF3365) 27 205 1.1E-16 T 22-04-2016 IPR021796 Protein of unknown function DUF3365 SMGD1_RS14480 ba3d86cbad0885f4de3701ca1680b4df 515 SUPERFAMILY SSF47384 283 354 7.46E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS14480 ba3d86cbad0885f4de3701ca1680b4df 515 PANTHER PTHR24423 196 209 1.8E-33 T 22-04-2016 SMGD1_RS14480 ba3d86cbad0885f4de3701ca1680b4df 515 PANTHER PTHR24423 284 506 1.8E-33 T 22-04-2016 SMGD1_RS14480 ba3d86cbad0885f4de3701ca1680b4df 515 PANTHER PTHR24423 240 256 1.8E-33 T 22-04-2016 SMGD1_RS14480 ba3d86cbad0885f4de3701ca1680b4df 515 PRINTS PR00344 Bacterial sensor protein C-terminal signature 439 453 5.1E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS14480 ba3d86cbad0885f4de3701ca1680b4df 515 PRINTS PR00344 Bacterial sensor protein C-terminal signature 494 507 5.1E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS14480 ba3d86cbad0885f4de3701ca1680b4df 515 PRINTS PR00344 Bacterial sensor protein C-terminal signature 457 467 5.1E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS14480 ba3d86cbad0885f4de3701ca1680b4df 515 PRINTS PR00344 Bacterial sensor protein C-terminal signature 470 488 5.1E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS14480 ba3d86cbad0885f4de3701ca1680b4df 515 Gene3D G3DSA:1.10.287.130 283 342 6.6E-4 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS14480 ba3d86cbad0885f4de3701ca1680b4df 515 Gene3D G3DSA:3.30.565.10 343 506 1.3E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS03895 85303065549a2c7bcf3e41054c301efe 256 Gene3D G3DSA:3.30.230.10 4 162 2.6E-39 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SMGD1_RS03895 85303065549a2c7bcf3e41054c301efe 256 SUPERFAMILY SSF54211 2 160 9.11E-33 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SMGD1_RS03895 85303065549a2c7bcf3e41054c301efe 256 Gene3D G3DSA:3.30.70.890 171 254 4.8E-7 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain SMGD1_RS03895 85303065549a2c7bcf3e41054c301efe 256 Hamap MF_00061 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 2 256 21.19 T 22-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 SMGD1_RS03895 85303065549a2c7bcf3e41054c301efe 256 PANTHER PTHR20861 4 255 2.9E-49 T 22-04-2016 SMGD1_RS03895 85303065549a2c7bcf3e41054c301efe 256 PIRSF PIRSF010376 1 256 3.0E-62 T 22-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 SMGD1_RS03895 85303065549a2c7bcf3e41054c301efe 256 PANTHER PTHR20861:SF2 4 255 2.9E-49 T 22-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 SMGD1_RS03895 85303065549a2c7bcf3e41054c301efe 256 SUPERFAMILY SSF55060 169 255 5.04E-7 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain SMGD1_RS03895 85303065549a2c7bcf3e41054c301efe 256 Pfam PF00288 GHMP kinases N terminal domain 90 146 1.7E-7 T 22-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 SMGD1_RS03895 85303065549a2c7bcf3e41054c301efe 256 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 4 254 1.6E-56 T 22-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 SMGD1_RS06455 ee6ec7774a6905bee0e87958ed608564 419 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 351 417 3.1E-16 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain SMGD1_RS06455 ee6ec7774a6905bee0e87958ed608564 419 Pfam PF00460 Flagella basal body rod protein 6 36 7.4E-7 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 SMGD1_RS06455 ee6ec7774a6905bee0e87958ed608564 419 PANTHER PTHR30435:SF1 2 131 2.8E-58 T 22-04-2016 SMGD1_RS06455 ee6ec7774a6905bee0e87958ed608564 419 PANTHER PTHR30435:SF1 293 417 2.8E-58 T 22-04-2016 SMGD1_RS06455 ee6ec7774a6905bee0e87958ed608564 419 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 12 32 - T 22-04-2016 IPR019776 Flagellar basal body rod protein, conserved site SMGD1_RS06455 ee6ec7774a6905bee0e87958ed608564 419 SUPERFAMILY SSF117143 87 379 6.28E-38 T 22-04-2016 SMGD1_RS06455 ee6ec7774a6905bee0e87958ed608564 419 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 5 400 2.4E-59 T 22-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G SMGD1_RS06455 ee6ec7774a6905bee0e87958ed608564 419 PANTHER PTHR30435 2 131 2.8E-58 T 22-04-2016 SMGD1_RS06455 ee6ec7774a6905bee0e87958ed608564 419 PANTHER PTHR30435 293 417 2.8E-58 T 22-04-2016 SMGD1_RS04785 8f922b57cee55d1f6962f7f4bac99c91 134 Pfam PF07366 SnoaL-like polyketide cyclase 8 131 4.4E-25 T 22-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain SMGD1_RS04785 8f922b57cee55d1f6962f7f4bac99c91 134 SUPERFAMILY SSF54427 1 131 3.84E-27 T 22-04-2016 IPR032710 NTF2-like domain SMGD1_RS04785 8f922b57cee55d1f6962f7f4bac99c91 134 Gene3D G3DSA:3.10.450.50 3 132 4.4E-27 T 22-04-2016 IPR032710 NTF2-like domain SMGD1_RS04785 8f922b57cee55d1f6962f7f4bac99c91 134 PANTHER PTHR38436 12 131 9.2E-15 T 22-04-2016 SMGD1_RS09915 349cc374eca60d084905519f29abc163 431 Gene3D G3DSA:3.40.50.300 1 209 1.9E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS09915 349cc374eca60d084905519f29abc163 431 PANTHER PTHR24031 1 431 1.3E-159 T 22-04-2016 SMGD1_RS09915 349cc374eca60d084905519f29abc163 431 SMART SM00490 256 337 2.1E-31 T 22-04-2016 IPR001650 Helicase, C-terminal SMGD1_RS09915 349cc374eca60d084905519f29abc163 431 SUPERFAMILY SSF52540 74 355 3.97E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS09915 349cc374eca60d084905519f29abc163 431 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 151 159 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site SMGD1_RS09915 349cc374eca60d084905519f29abc163 431 Pfam PF00270 DEAD/DEAH box helicase 25 194 5.1E-47 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SMGD1_RS09915 349cc374eca60d084905519f29abc163 431 Pfam PF00271 Helicase conserved C-terminal domain 231 337 1.6E-28 T 22-04-2016 IPR001650 Helicase, C-terminal SMGD1_RS09915 349cc374eca60d084905519f29abc163 431 SMART SM00487 20 220 1.5E-53 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SMGD1_RS09915 349cc374eca60d084905519f29abc163 431 Gene3D G3DSA:3.40.50.300 210 369 1.9E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS04600 0b34ddd39b6cb25f75ef7e40c9784245 639 SUPERFAMILY SSF52922 519 639 1.19E-35 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 SMGD1_RS04600 0b34ddd39b6cb25f75ef7e40c9784245 639 PANTHER PTHR11624:SF1 330 639 2.2E-289 T 22-04-2016 SMGD1_RS04600 0b34ddd39b6cb25f75ef7e40c9784245 639 PANTHER PTHR11624:SF1 2 311 2.2E-289 T 22-04-2016 SMGD1_RS04600 0b34ddd39b6cb25f75ef7e40c9784245 639 Gene3D G3DSA:3.40.50.970 6 316 2.1E-112 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SMGD1_RS04600 0b34ddd39b6cb25f75ef7e40c9784245 639 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 6 312 7.6E-122 T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 SMGD1_RS04600 0b34ddd39b6cb25f75ef7e40c9784245 639 Pfam PF02779 Transketolase, pyrimidine binding domain 345 510 3.1E-37 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain SMGD1_RS04600 0b34ddd39b6cb25f75ef7e40c9784245 639 SUPERFAMILY SSF52518 336 512 2.67E-56 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SMGD1_RS04600 0b34ddd39b6cb25f75ef7e40c9784245 639 SUPERFAMILY SSF52518 7 319 9.38E-101 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SMGD1_RS04600 0b34ddd39b6cb25f75ef7e40c9784245 639 Gene3D G3DSA:3.40.50.920 522 639 5.4E-36 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 SMGD1_RS04600 0b34ddd39b6cb25f75ef7e40c9784245 639 SMART SM00861 344 511 2.3E-55 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain SMGD1_RS04600 0b34ddd39b6cb25f75ef7e40c9784245 639 ProSitePatterns PS00801 Transketolase signature 1. 14 34 - T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 SMGD1_RS04600 0b34ddd39b6cb25f75ef7e40c9784245 639 Gene3D G3DSA:3.40.50.970 340 515 4.7E-61 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SMGD1_RS04600 0b34ddd39b6cb25f75ef7e40c9784245 639 ProSitePatterns PS00802 Transketolase signature 2. 453 469 - T 22-04-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 SMGD1_RS04600 0b34ddd39b6cb25f75ef7e40c9784245 639 TIGRFAM TIGR00232 tktlase_bact: transketolase 8 639 3.7E-237 T 22-04-2016 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 SMGD1_RS04600 0b34ddd39b6cb25f75ef7e40c9784245 639 PANTHER PTHR11624 330 639 2.2E-289 T 22-04-2016 IPR033247 Transketolase family SMGD1_RS04600 0b34ddd39b6cb25f75ef7e40c9784245 639 PANTHER PTHR11624 2 311 2.2E-289 T 22-04-2016 IPR033247 Transketolase family SMGD1_RS10135 81102088f32b79f26fd8c6016fbef1e2 484 Pfam PF12161 HsdM N-terminal domain 3 143 1.3E-11 T 22-04-2016 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain SMGD1_RS10135 81102088f32b79f26fd8c6016fbef1e2 484 Pfam PF02384 N-6 DNA Methylase 154 453 2.0E-63 T 22-04-2016 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 SMGD1_RS10135 81102088f32b79f26fd8c6016fbef1e2 484 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 176 192 5.2E-18 T 22-04-2016 SMGD1_RS10135 81102088f32b79f26fd8c6016fbef1e2 484 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 283 295 5.2E-18 T 22-04-2016 SMGD1_RS10135 81102088f32b79f26fd8c6016fbef1e2 484 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 200 214 5.2E-18 T 22-04-2016 SMGD1_RS10135 81102088f32b79f26fd8c6016fbef1e2 484 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 310 334 5.2E-18 T 22-04-2016 SMGD1_RS10135 81102088f32b79f26fd8c6016fbef1e2 484 SUPERFAMILY SSF53335 3 484 4.42E-113 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS10135 81102088f32b79f26fd8c6016fbef1e2 484 PANTHER PTHR30195 165 484 8.1E-46 T 22-04-2016 SMGD1_RS10135 81102088f32b79f26fd8c6016fbef1e2 484 PANTHER PTHR30195:SF2 165 484 8.1E-46 T 22-04-2016 SMGD1_RS10135 81102088f32b79f26fd8c6016fbef1e2 484 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 286 292 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 SMGD1_RS10135 81102088f32b79f26fd8c6016fbef1e2 484 Gene3D G3DSA:3.40.50.150 178 400 2.6E-42 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS07595 8d31497da5822e278b9dc463a468eecb 905 Pfam PF00580 UvrD/REP helicase N-terminal domain 4 395 1.0E-42 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 SMGD1_RS07595 8d31497da5822e278b9dc463a468eecb 905 Pfam PF01930 Domain of unknown function DUF83 826 898 4.5E-6 T 22-04-2016 IPR022765 Dna2/Cas4, domain of unknown function DUF83 SMGD1_RS07595 8d31497da5822e278b9dc463a468eecb 905 PANTHER PTHR11070 5 67 3.8E-72 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 SMGD1_RS07595 8d31497da5822e278b9dc463a468eecb 905 PANTHER PTHR11070 91 187 3.8E-72 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 SMGD1_RS07595 8d31497da5822e278b9dc463a468eecb 905 PANTHER PTHR11070 250 644 3.8E-72 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 SMGD1_RS07595 8d31497da5822e278b9dc463a468eecb 905 PANTHER PTHR11070 675 697 3.8E-72 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 SMGD1_RS07595 8d31497da5822e278b9dc463a468eecb 905 Pfam PF13361 UvrD-like helicase C-terminal domain 403 543 1.1E-9 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 SMGD1_RS07595 8d31497da5822e278b9dc463a468eecb 905 Pfam PF13361 UvrD-like helicase C-terminal domain 602 698 1.4E-10 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 SMGD1_RS07595 8d31497da5822e278b9dc463a468eecb 905 SUPERFAMILY SSF52980 746 893 2.09E-8 T 22-04-2016 IPR011335 Restriction endonuclease type II-like SMGD1_RS07595 8d31497da5822e278b9dc463a468eecb 905 Gene3D G3DSA:3.40.50.300 4 54 9.6E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS07595 8d31497da5822e278b9dc463a468eecb 905 Gene3D G3DSA:3.40.50.300 99 161 9.6E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS07595 8d31497da5822e278b9dc463a468eecb 905 Gene3D G3DSA:3.40.50.300 285 397 9.6E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS07595 8d31497da5822e278b9dc463a468eecb 905 SUPERFAMILY SSF52540 5 58 5.57E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS07595 8d31497da5822e278b9dc463a468eecb 905 SUPERFAMILY SSF52540 91 144 5.57E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS07595 8d31497da5822e278b9dc463a468eecb 905 SUPERFAMILY SSF52540 272 643 5.57E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS07595 8d31497da5822e278b9dc463a468eecb 905 SUPERFAMILY SSF52540 676 702 5.57E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS07595 8d31497da5822e278b9dc463a468eecb 905 Gene3D G3DSA:3.40.50.300 597 707 1.9E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS07595 8d31497da5822e278b9dc463a468eecb 905 Gene3D G3DSA:3.40.50.300 405 497 1.9E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS08890 b4a5ad01080052eb35546cac16fe6b91 185 PANTHER PTHR15362 15 147 1.2E-13 T 22-04-2016 SMGD1_RS08890 b4a5ad01080052eb35546cac16fe6b91 185 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 54 76 - T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 SMGD1_RS08890 b4a5ad01080052eb35546cac16fe6b91 185 Pfam PF01066 CDP-alcohol phosphatidyltransferase 12 76 4.6E-14 T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 SMGD1_RS08890 b4a5ad01080052eb35546cac16fe6b91 185 PANTHER PTHR15362:SF2 15 147 1.2E-13 T 22-04-2016 SMGD1_RS12010 9822bb1413aa10d2c725631b97a56aae 304 SUPERFAMILY SSF55073 148 300 1.18E-43 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS12010 9822bb1413aa10d2c725631b97a56aae 304 PANTHER PTHR10799:SF750 1 18 7.6E-26 T 22-04-2016 SMGD1_RS12010 9822bb1413aa10d2c725631b97a56aae 304 PANTHER PTHR10799:SF750 175 300 7.6E-26 T 22-04-2016 SMGD1_RS12010 9822bb1413aa10d2c725631b97a56aae 304 Gene3D G3DSA:3.30.70.270 145 300 1.9E-48 T 22-04-2016 SMGD1_RS12010 9822bb1413aa10d2c725631b97a56aae 304 SMART SM00267 132 302 1.7E-52 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS12010 9822bb1413aa10d2c725631b97a56aae 304 Pfam PF00990 Diguanylate cyclase, GGDEF domain 144 298 2.2E-45 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS12010 9822bb1413aa10d2c725631b97a56aae 304 PANTHER PTHR10799 1 18 7.6E-26 T 22-04-2016 SMGD1_RS12010 9822bb1413aa10d2c725631b97a56aae 304 PANTHER PTHR10799 175 300 7.6E-26 T 22-04-2016 SMGD1_RS12010 9822bb1413aa10d2c725631b97a56aae 304 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 139 301 8.4E-44 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS07640 07bede05be54eacff0984ed4dc046e21 219 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 90 173 1.2E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SMGD1_RS07640 07bede05be54eacff0984ed4dc046e21 219 SUPERFAMILY SSF56784 3 209 6.1E-49 T 22-04-2016 IPR023214 HAD-like domain SMGD1_RS07640 07bede05be54eacff0984ed4dc046e21 219 Pfam PF13419 Haloacid dehalogenase-like hydrolase 3 179 2.5E-42 T 22-04-2016 IPR023214 HAD-like domain SMGD1_RS07640 07bede05be54eacff0984ed4dc046e21 219 Gene3D G3DSA:1.10.150.240 14 69 3.6E-14 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 SMGD1_RS07640 07bede05be54eacff0984ed4dc046e21 219 PANTHER PTHR18901 3 212 6.1E-41 T 22-04-2016 SMGD1_RS07640 07bede05be54eacff0984ed4dc046e21 219 PANTHER PTHR18901:SF14 3 212 6.1E-41 T 22-04-2016 SMGD1_RS07640 07bede05be54eacff0984ed4dc046e21 219 Gene3D G3DSA:3.40.50.1000 70 207 4.7E-33 T 22-04-2016 IPR023214 HAD-like domain SMGD1_RS05820 6dbe576249370dad47d5927cae956d1c 153 Pfam PF13501 Sulfur oxidation protein SoxY 47 151 1.8E-22 T 22-04-2016 IPR032711 Ig-like SoxY domain SMGD1_RS05820 6dbe576249370dad47d5927cae956d1c 153 PIRSF PIRSF010312 1 153 2.1E-30 T 22-04-2016 IPR016568 Sulphur oxidation, SoxY SMGD1_RS14090 bafefb011a19c6596851bfec3300c3b0 407 SUPERFAMILY SSF53756 40 404 4.87E-46 T 22-04-2016 SMGD1_RS14090 bafefb011a19c6596851bfec3300c3b0 407 PANTHER PTHR30160:SF1 39 399 6.4E-20 T 22-04-2016 SMGD1_RS14090 bafefb011a19c6596851bfec3300c3b0 407 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 118 374 1.2E-16 T 22-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 SMGD1_RS14090 bafefb011a19c6596851bfec3300c3b0 407 Gene3D G3DSA:3.40.50.2000 231 402 1.8E-31 T 22-04-2016 SMGD1_RS14090 bafefb011a19c6596851bfec3300c3b0 407 PANTHER PTHR30160 39 399 6.4E-20 T 22-04-2016 SMGD1_RS14090 bafefb011a19c6596851bfec3300c3b0 407 Gene3D G3DSA:3.40.50.2000 40 187 2.6E-8 T 22-04-2016 SMGD1_RS00875 0c4e45386a37b23293b476393f35e96e 184 Pfam PF03748 Flagellar basal body-associated protein FliL 89 184 1.2E-24 T 22-04-2016 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 SMGD1_RS00875 0c4e45386a37b23293b476393f35e96e 184 PANTHER PTHR35091 2 68 1.6E-32 T 22-04-2016 SMGD1_RS00875 0c4e45386a37b23293b476393f35e96e 184 PANTHER PTHR35091 86 184 1.6E-32 T 22-04-2016 SMGD1_RS00875 0c4e45386a37b23293b476393f35e96e 184 PANTHER PTHR35091:SF2 2 68 1.6E-32 T 22-04-2016 SMGD1_RS00875 0c4e45386a37b23293b476393f35e96e 184 PANTHER PTHR35091:SF2 86 184 1.6E-32 T 22-04-2016 SMGD1_RS00765 7745ed65e9ee68a53092970fe1b30135 436 PIRSF PIRSF000445 1 426 1.8E-120 T 22-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 SMGD1_RS00765 7745ed65e9ee68a53092970fe1b30135 436 PANTHER PTHR13812:SF18 1 409 1.8E-77 T 22-04-2016 SMGD1_RS00765 7745ed65e9ee68a53092970fe1b30135 436 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 100 123 - T 22-04-2016 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 SMGD1_RS00765 7745ed65e9ee68a53092970fe1b30135 436 SUPERFAMILY SSF69742 1 159 1.83E-39 T 22-04-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 SMGD1_RS00765 7745ed65e9ee68a53092970fe1b30135 436 SUPERFAMILY SSF69075 310 402 1.57E-11 T 22-04-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 SMGD1_RS00765 7745ed65e9ee68a53092970fe1b30135 436 Gene3D G3DSA:3.40.50.720 164 303 4.7E-24 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS00765 7745ed65e9ee68a53092970fe1b30135 436 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 157 1.7E-37 T 22-04-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 SMGD1_RS00765 7745ed65e9ee68a53092970fe1b30135 436 SUPERFAMILY SSF51735 164 304 4.9E-25 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS00765 7745ed65e9ee68a53092970fe1b30135 436 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 411 24.559 T 22-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 SMGD1_RS00765 7745ed65e9ee68a53092970fe1b30135 436 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 175 299 4.9E-32 T 22-04-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase SMGD1_RS00765 7745ed65e9ee68a53092970fe1b30135 436 PANTHER PTHR13812 1 409 1.8E-77 T 22-04-2016 SMGD1_RS00765 7745ed65e9ee68a53092970fe1b30135 436 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 5 406 8.7E-112 T 22-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 SMGD1_RS00765 7745ed65e9ee68a53092970fe1b30135 436 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 313 401 5.5E-14 T 22-04-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 SMGD1_RS13820 31525615ad85f1143693717ef6b04ac5 182 Pfam PF00156 Phosphoribosyl transferase domain 33 163 3.0E-15 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 SMGD1_RS13820 31525615ad85f1143693717ef6b04ac5 182 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 11 181 34.743 T 22-04-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 SMGD1_RS13820 31525615ad85f1143693717ef6b04ac5 182 PANTHER PTHR32315 1 180 2.6E-75 T 22-04-2016 SMGD1_RS13820 31525615ad85f1143693717ef6b04ac5 182 SUPERFAMILY SSF53271 15 172 5.38E-48 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SMGD1_RS13820 31525615ad85f1143693717ef6b04ac5 182 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 12 180 1.9E-67 T 22-04-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 SMGD1_RS13820 31525615ad85f1143693717ef6b04ac5 182 Gene3D G3DSA:3.40.50.2020 9 181 1.5E-65 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SMGD1_RS09715 5b314788069eb62002d85be4da94a4f1 225 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 3 24 1.9E-5 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site SMGD1_RS09715 5b314788069eb62002d85be4da94a4f1 225 Gene3D G3DSA:3.30.700.10 5 42 5.5E-5 T 22-04-2016 SMGD1_RS09715 5b314788069eb62002d85be4da94a4f1 225 Pfam PF07963 Prokaryotic N-terminal methylation motif 3 21 1.1E-4 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site SMGD1_RS09715 5b314788069eb62002d85be4da94a4f1 225 SUPERFAMILY SSF54523 5 90 3.45E-10 T 22-04-2016 SMGD1_RS09015 5657ec730eaef89c2a43706d0b627fa6 437 SMART SM00729 136 353 2.4E-40 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 SMGD1_RS09015 5657ec730eaef89c2a43706d0b627fa6 437 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 4 424 8.3E-114 T 22-04-2016 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 SMGD1_RS09015 5657ec730eaef89c2a43706d0b627fa6 437 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 140 160 - T 22-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 SMGD1_RS09015 5657ec730eaef89c2a43706d0b627fa6 437 Gene3D G3DSA:3.80.30.20 136 364 1.2E-60 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe SMGD1_RS09015 5657ec730eaef89c2a43706d0b627fa6 437 Pfam PF04055 Radical SAM superfamily 141 310 2.8E-18 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SMGD1_RS09015 5657ec730eaef89c2a43706d0b627fa6 437 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 3 434 54.386 T 22-04-2016 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 SMGD1_RS09015 5657ec730eaef89c2a43706d0b627fa6 437 PANTHER PTHR11918 1 424 4.5E-124 T 22-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein SMGD1_RS09015 5657ec730eaef89c2a43706d0b627fa6 437 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 429 4.6E-97 T 22-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 SMGD1_RS09015 5657ec730eaef89c2a43706d0b627fa6 437 SUPERFAMILY SSF102114 128 357 3.01E-46 T 22-04-2016 SMGD1_RS09015 5657ec730eaef89c2a43706d0b627fa6 437 PANTHER PTHR11918:SF57 1 424 4.5E-124 T 22-04-2016 SMGD1_RS09015 5657ec730eaef89c2a43706d0b627fa6 437 Pfam PF00919 Uncharacterized protein family UPF0004 4 99 4.8E-27 T 22-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 SMGD1_RS09015 5657ec730eaef89c2a43706d0b627fa6 437 Gene3D G3DSA:2.40.50.140 368 425 1.1E-10 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMGD1_RS00835 b6851ce57d96483d86c694cad1bf5945 522 Pfam PF01966 HD domain 340 430 5.6E-17 T 22-04-2016 IPR006674 HD domain SMGD1_RS00835 b6851ce57d96483d86c694cad1bf5945 522 SMART SM00471 334 440 1.5E-12 T 22-04-2016 IPR003607 HD/PDEase domain SMGD1_RS00835 b6851ce57d96483d86c694cad1bf5945 522 Gene3D G3DSA:3.30.1370.10 222 276 2.8E-5 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 SMGD1_RS00835 b6851ce57d96483d86c694cad1bf5945 522 SUPERFAMILY SSF54791 211 295 1.9E-12 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 SMGD1_RS00835 b6851ce57d96483d86c694cad1bf5945 522 Pfam PF00013 KH domain 222 257 1.1E-4 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 SMGD1_RS00835 b6851ce57d96483d86c694cad1bf5945 522 Pfam PF12072 Domain of unknown function (DUF3552) 12 205 1.5E-19 T 22-04-2016 IPR022711 Ribonuclease Y, N-terminal SMGD1_RS00835 b6851ce57d96483d86c694cad1bf5945 522 PANTHER PTHR12826 224 521 2.7E-103 T 22-04-2016 SMGD1_RS00835 b6851ce57d96483d86c694cad1bf5945 522 Hamap MF_00335 Ribonuclease Y [rny]. 3 522 22.517 T 22-04-2016 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 SMGD1_RS00835 b6851ce57d96483d86c694cad1bf5945 522 SUPERFAMILY SSF109604 318 469 2.2E-24 T 22-04-2016 SMGD1_RS00835 b6851ce57d96483d86c694cad1bf5945 522 SMART SM00322 208 277 5.4E-5 T 22-04-2016 IPR004087 K Homology domain GO:0003676 SMGD1_RS00835 b6851ce57d96483d86c694cad1bf5945 522 TIGRFAM TIGR00277 HDIG: HDIG domain 334 411 6.0E-23 T 22-04-2016 IPR006675 HDIG domain SMGD1_RS00835 b6851ce57d96483d86c694cad1bf5945 522 TIGRFAM TIGR03319 RNase_Y: ribonuclease Y 13 522 5.3E-181 T 22-04-2016 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 SMGD1_RS00835 b6851ce57d96483d86c694cad1bf5945 522 Gene3D G3DSA:1.10.3210.10 317 498 5.3E-36 T 22-04-2016 IPR006674 HD domain SMGD1_RS03730 65f61935435dcf5681a615701c02c2d8 395 Gene3D G3DSA:3.40.50.300 114 354 1.1E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS03730 65f61935435dcf5681a615701c02c2d8 395 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 19 357 7.8E-128 T 22-04-2016 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 SMGD1_RS03730 65f61935435dcf5681a615701c02c2d8 395 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 207 221 - T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 SMGD1_RS03730 65f61935435dcf5681a615701c02c2d8 395 SUPERFAMILY SSF52540 21 350 4.11E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS03730 65f61935435dcf5681a615701c02c2d8 395 Pfam PF00437 Type II/IV secretion system protein 129 277 1.6E-40 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 SMGD1_RS03730 65f61935435dcf5681a615701c02c2d8 395 PANTHER PTHR30486:SF6 22 389 3.1E-129 T 22-04-2016 SMGD1_RS03730 65f61935435dcf5681a615701c02c2d8 395 PANTHER PTHR30486 22 389 3.1E-129 T 22-04-2016 SMGD1_RS00490 8d0cc22fc6b81df7f29d261ee6cae0dc 318 SMART SM00471 150 286 1.4E-7 T 22-04-2016 IPR003607 HD/PDEase domain SMGD1_RS00490 8d0cc22fc6b81df7f29d261ee6cae0dc 318 Gene3D G3DSA:1.10.3210.10 154 299 1.0E-22 T 22-04-2016 IPR006674 HD domain SMGD1_RS00490 8d0cc22fc6b81df7f29d261ee6cae0dc 318 TIGRFAM TIGR00277 HDIG: HDIG domain 156 246 4.5E-7 T 22-04-2016 IPR006675 HDIG domain SMGD1_RS00490 8d0cc22fc6b81df7f29d261ee6cae0dc 318 Pfam PF01966 HD domain 156 276 1.2E-16 T 22-04-2016 IPR006674 HD domain SMGD1_RS00490 8d0cc22fc6b81df7f29d261ee6cae0dc 318 SUPERFAMILY SSF109604 155 301 5.86E-26 T 22-04-2016 SMGD1_RS05155 5af04fd46fe869e4d48ab98da281ba67 217 Pfam PF00483 Nucleotidyl transferase 2 216 7.8E-21 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 SMGD1_RS05155 5af04fd46fe869e4d48ab98da281ba67 217 Gene3D G3DSA:3.90.550.10 1 216 2.4E-49 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMGD1_RS05155 5af04fd46fe869e4d48ab98da281ba67 217 PANTHER PTHR22572:SF15 2 217 1.1E-43 T 22-04-2016 SMGD1_RS05155 5af04fd46fe869e4d48ab98da281ba67 217 SUPERFAMILY SSF53448 1 216 2.93E-50 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMGD1_RS05155 5af04fd46fe869e4d48ab98da281ba67 217 PANTHER PTHR22572 2 217 1.1E-43 T 22-04-2016 SMGD1_RS09555 6628c463523784f5f459abe2f8438e5c 266 Gene3D G3DSA:1.10.3150.10 3 265 1.5E-56 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD SMGD1_RS09555 6628c463523784f5f459abe2f8438e5c 266 PANTHER PTHR33525 2 255 3.0E-35 T 22-04-2016 SMGD1_RS09555 6628c463523784f5f459abe2f8438e5c 266 PANTHER PTHR33525:SF3 2 255 3.0E-35 T 22-04-2016 SMGD1_RS09555 6628c463523784f5f459abe2f8438e5c 266 Pfam PF08668 HDOD domain 12 209 1.2E-35 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD SMGD1_RS09555 6628c463523784f5f459abe2f8438e5c 266 SUPERFAMILY SSF109604 3 262 3.77E-50 T 22-04-2016 SMGD1_RS05855 5f1b9597abff3014c8e1e04896254b11 118 SUPERFAMILY SSF81901 18 108 3.14E-17 T 22-04-2016 SMGD1_RS05855 5f1b9597abff3014c8e1e04896254b11 118 SMART SM00671 31 66 2.7E-7 T 22-04-2016 IPR006597 Sel1-like repeat SMGD1_RS05855 5f1b9597abff3014c8e1e04896254b11 118 SMART SM00671 67 103 0.033 T 22-04-2016 IPR006597 Sel1-like repeat SMGD1_RS05855 5f1b9597abff3014c8e1e04896254b11 118 Gene3D G3DSA:1.25.40.10 20 111 8.2E-18 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS05855 5f1b9597abff3014c8e1e04896254b11 118 Pfam PF08238 Sel1 repeat 35 63 1.4E-5 T 22-04-2016 IPR006597 Sel1-like repeat SMGD1_RS05855 5f1b9597abff3014c8e1e04896254b11 118 Pfam PF08238 Sel1 repeat 68 92 0.75 T 22-04-2016 IPR006597 Sel1-like repeat SMGD1_RS00965 37ef1c27a0fd713a7efbe6b8f6eec976 142 PANTHER PTHR22924:SF49 3 139 5.5E-29 T 22-04-2016 SMGD1_RS00965 37ef1c27a0fd713a7efbe6b8f6eec976 142 Gene3D G3DSA:1.10.490.10 3 139 9.8E-43 T 22-04-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 SMGD1_RS00965 37ef1c27a0fd713a7efbe6b8f6eec976 142 Pfam PF00042 Globin 8 97 1.5E-10 T 22-04-2016 IPR000971 Globin GO:0019825|GO:0020037 SMGD1_RS00965 37ef1c27a0fd713a7efbe6b8f6eec976 142 SUPERFAMILY SSF46458 1 136 1.31E-34 T 22-04-2016 IPR009050 Globin-like SMGD1_RS00965 37ef1c27a0fd713a7efbe6b8f6eec976 142 PANTHER PTHR22924 3 139 5.5E-29 T 22-04-2016 SMGD1_RS07745 2935cf8a03f08399a4e20fcb0c69faeb 321 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 17 28 - T 22-04-2016 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 SMGD1_RS07745 2935cf8a03f08399a4e20fcb0c69faeb 321 Hamap MF_01225_B Cyclic pyranopterin monophosphate synthase [moaA]. 2 321 36.513 T 22-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 SMGD1_RS07745 2935cf8a03f08399a4e20fcb0c69faeb 321 SUPERFAMILY SSF102114 2 270 6.15E-67 T 22-04-2016 SMGD1_RS07745 2935cf8a03f08399a4e20fcb0c69faeb 321 Pfam PF06463 Molybdenum Cofactor Synthesis C 182 302 3.0E-28 T 22-04-2016 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 SMGD1_RS07745 2935cf8a03f08399a4e20fcb0c69faeb 321 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 2 321 8.5E-106 T 22-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 SMGD1_RS07745 2935cf8a03f08399a4e20fcb0c69faeb 321 PANTHER PTHR22960 1 268 1.5E-99 T 22-04-2016 SMGD1_RS07745 2935cf8a03f08399a4e20fcb0c69faeb 321 SMART SM00729 11 212 3.4E-10 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 SMGD1_RS07745 2935cf8a03f08399a4e20fcb0c69faeb 321 Pfam PF04055 Radical SAM superfamily 15 175 2.2E-26 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SMGD1_RS07745 2935cf8a03f08399a4e20fcb0c69faeb 321 Gene3D G3DSA:3.20.20.70 2 286 3.7E-69 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMGD1_RS07745 2935cf8a03f08399a4e20fcb0c69faeb 321 Pfam PF13353 4Fe-4S single cluster domain 18 121 4.7E-9 T 22-04-2016 SMGD1_RS05000 110ca8b80a7fe75af91b2f23e00a6ea8 421 Pfam PF00390 Malic enzyme, N-terminal domain 22 152 2.6E-28 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 SMGD1_RS05000 110ca8b80a7fe75af91b2f23e00a6ea8 421 SUPERFAMILY SSF51735 165 417 1.83E-74 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS05000 110ca8b80a7fe75af91b2f23e00a6ea8 421 PIRSF PIRSF000106 18 419 1.9E-66 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 SMGD1_RS05000 110ca8b80a7fe75af91b2f23e00a6ea8 421 ProSitePatterns PS00331 Malic enzymes signature. 161 177 - T 22-04-2016 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 SMGD1_RS05000 110ca8b80a7fe75af91b2f23e00a6ea8 421 SMART SM00919 165 397 3.2E-118 T 22-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 SMGD1_RS05000 110ca8b80a7fe75af91b2f23e00a6ea8 421 Gene3D G3DSA:3.40.50.10380 7 162 8.0E-51 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 SMGD1_RS05000 110ca8b80a7fe75af91b2f23e00a6ea8 421 PANTHER PTHR23406 33 400 1.1E-141 T 22-04-2016 SMGD1_RS05000 110ca8b80a7fe75af91b2f23e00a6ea8 421 Pfam PF03949 Malic enzyme, NAD binding domain 167 358 2.3E-24 T 22-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 SMGD1_RS05000 110ca8b80a7fe75af91b2f23e00a6ea8 421 SMART SM01274 20 153 6.3E-78 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 SMGD1_RS05000 110ca8b80a7fe75af91b2f23e00a6ea8 421 Gene3D G3DSA:3.40.50.720 163 411 6.3E-76 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS05000 110ca8b80a7fe75af91b2f23e00a6ea8 421 SUPERFAMILY SSF53223 11 163 2.01E-51 T 22-04-2016 SMGD1_RS05000 110ca8b80a7fe75af91b2f23e00a6ea8 421 PANTHER PTHR23406:SF23 33 400 1.1E-141 T 22-04-2016 SMGD1_RS07895 a82af3aff4f155a152d3315a62f9130e 668 Gene3D G3DSA:1.10.3810.10 58 233 1.7E-67 T 22-04-2016 SMGD1_RS07895 a82af3aff4f155a152d3315a62f9130e 668 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 66 618 4.0E-176 T 22-04-2016 SMGD1_RS07895 a82af3aff4f155a152d3315a62f9130e 668 SUPERFAMILY SSF56601 262 644 1.25E-105 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SMGD1_RS07895 a82af3aff4f155a152d3315a62f9130e 668 SUPERFAMILY SSF56601 212 234 1.25E-105 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SMGD1_RS07895 a82af3aff4f155a152d3315a62f9130e 668 SUPERFAMILY SSF53955 42 250 9.28E-72 T 22-04-2016 IPR023346 Lysozyme-like domain SMGD1_RS07895 a82af3aff4f155a152d3315a62f9130e 668 Pfam PF00905 Penicillin binding protein transpeptidase domain 344 616 2.5E-37 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 SMGD1_RS07895 a82af3aff4f155a152d3315a62f9130e 668 Pfam PF00912 Transglycosylase 56 231 4.1E-61 T 22-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 SMGD1_RS07895 a82af3aff4f155a152d3315a62f9130e 668 PANTHER PTHR32282:SF5 338 637 3.0E-188 T 22-04-2016 SMGD1_RS07895 a82af3aff4f155a152d3315a62f9130e 668 PANTHER PTHR32282:SF5 1 310 3.0E-188 T 22-04-2016 SMGD1_RS07895 a82af3aff4f155a152d3315a62f9130e 668 PANTHER PTHR32282 338 637 3.0E-188 T 22-04-2016 SMGD1_RS07895 a82af3aff4f155a152d3315a62f9130e 668 PANTHER PTHR32282 1 310 3.0E-188 T 22-04-2016 SMGD1_RS07895 a82af3aff4f155a152d3315a62f9130e 668 Gene3D G3DSA:3.40.710.10 234 655 1.8E-110 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SMGD1_RS08850 438930346ef827cbf62799865dad7d03 228 Pfam PF00072 Response regulator receiver domain 10 119 1.6E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS08850 438930346ef827cbf62799865dad7d03 228 SUPERFAMILY SSF46894 142 223 3.68E-14 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SMGD1_RS08850 438930346ef827cbf62799865dad7d03 228 SMART SM00862 153 223 9.4E-13 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMGD1_RS08850 438930346ef827cbf62799865dad7d03 228 Gene3D G3DSA:1.10.10.10 159 223 5.6E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMGD1_RS08850 438930346ef827cbf62799865dad7d03 228 Gene3D G3DSA:3.40.50.2300 7 158 1.1E-34 T 22-04-2016 SMGD1_RS08850 438930346ef827cbf62799865dad7d03 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 223 2.4E-13 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMGD1_RS08850 438930346ef827cbf62799865dad7d03 228 SUPERFAMILY SSF52172 6 165 7.26E-35 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS08850 438930346ef827cbf62799865dad7d03 228 PANTHER PTHR26402 8 223 1.1E-38 T 22-04-2016 SMGD1_RS08850 438930346ef827cbf62799865dad7d03 228 SMART SM00448 8 119 3.9E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS05225 c62a7e066d88cd7a0b382f78b13ffc14 463 Gene3D G3DSA:3.80.30.20 198 387 1.9E-32 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe SMGD1_RS05225 c62a7e066d88cd7a0b382f78b13ffc14 463 PANTHER PTHR11918:SF64 4 387 5.0E-62 T 22-04-2016 SMGD1_RS05225 c62a7e066d88cd7a0b382f78b13ffc14 463 Pfam PF04055 Radical SAM superfamily 199 352 6.6E-18 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SMGD1_RS05225 c62a7e066d88cd7a0b382f78b13ffc14 463 SUPERFAMILY SSF102114 155 396 1.44E-34 T 22-04-2016 SMGD1_RS05225 c62a7e066d88cd7a0b382f78b13ffc14 463 SMART SM00729 193 399 1.5E-25 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 SMGD1_RS05225 c62a7e066d88cd7a0b382f78b13ffc14 463 PANTHER PTHR11918 4 387 5.0E-62 T 22-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein SMGD1_RS05225 c62a7e066d88cd7a0b382f78b13ffc14 463 Pfam PF02310 B12 binding domain 18 127 2.0E-13 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 SMGD1_RS14065 4a803591b6da9c44f0e47f296695792e 244 PANTHER PTHR30587:SF0 1 244 1.3E-107 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 SMGD1_RS14065 4a803591b6da9c44f0e47f296695792e 244 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 217 242 1.8E-63 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 SMGD1_RS14065 4a803591b6da9c44f0e47f296695792e 244 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 64 84 1.8E-63 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 SMGD1_RS14065 4a803591b6da9c44f0e47f296695792e 244 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 45 64 1.8E-63 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 SMGD1_RS14065 4a803591b6da9c44f0e47f296695792e 244 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 193 214 1.8E-63 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 SMGD1_RS14065 4a803591b6da9c44f0e47f296695792e 244 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 172 192 1.8E-63 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 SMGD1_RS14065 4a803591b6da9c44f0e47f296695792e 244 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 84 103 1.8E-63 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 SMGD1_RS14065 4a803591b6da9c44f0e47f296695792e 244 Pfam PF00813 FliP family 47 239 3.4E-78 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 SMGD1_RS14065 4a803591b6da9c44f0e47f296695792e 244 PANTHER PTHR30587 1 244 1.3E-107 T 22-04-2016 SMGD1_RS14065 4a803591b6da9c44f0e47f296695792e 244 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 220 232 - T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 SMGD1_RS14065 4a803591b6da9c44f0e47f296695792e 244 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 47 241 8.3E-81 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 SMGD1_RS14065 4a803591b6da9c44f0e47f296695792e 244 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 172 187 - T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 SMGD1_RS14065 4a803591b6da9c44f0e47f296695792e 244 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 43 52 2.7E-19 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 SMGD1_RS14065 4a803591b6da9c44f0e47f296695792e 244 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 115 129 2.7E-19 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 SMGD1_RS14065 4a803591b6da9c44f0e47f296695792e 244 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 165 177 2.7E-19 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 SMGD1_RS14065 4a803591b6da9c44f0e47f296695792e 244 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 103 115 2.7E-19 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 SMGD1_RS14065 4a803591b6da9c44f0e47f296695792e 244 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 233 243 2.7E-19 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 SMGD1_RS14065 4a803591b6da9c44f0e47f296695792e 244 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 143 155 2.7E-19 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 SMGD1_RS12585 325e33ddd2e00e168006e83e07ecc22c 189 Pfam PF01965 DJ-1/PfpI family 3 165 7.2E-43 T 22-04-2016 IPR002818 DJ-1/PfpI SMGD1_RS12585 325e33ddd2e00e168006e83e07ecc22c 189 SUPERFAMILY SSF52317 1 177 8.46E-48 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SMGD1_RS12585 325e33ddd2e00e168006e83e07ecc22c 189 Gene3D G3DSA:3.40.50.880 1 181 7.8E-55 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SMGD1_RS12585 325e33ddd2e00e168006e83e07ecc22c 189 PANTHER PTHR11019:SF4 1 189 2.1E-51 T 22-04-2016 SMGD1_RS12585 325e33ddd2e00e168006e83e07ecc22c 189 TIGRFAM TIGR01383 not_thiJ: DJ-1 family protein 3 178 2.3E-60 T 22-04-2016 IPR006287 DJ-1 SMGD1_RS12585 325e33ddd2e00e168006e83e07ecc22c 189 PANTHER PTHR11019 1 189 2.1E-51 T 22-04-2016 SMGD1_RS02150 e43f630b3597f6a6a08f7e97218135be 227 PANTHER PTHR32119 1 227 1.9E-71 T 22-04-2016 SMGD1_RS02150 e43f630b3597f6a6a08f7e97218135be 227 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 1 222 3.1E-47 T 22-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 SMGD1_RS02150 e43f630b3597f6a6a08f7e97218135be 227 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 3 223 1.3E-63 T 22-04-2016 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 SMGD1_RS02150 e43f630b3597f6a6a08f7e97218135be 227 SMART SM00934 2 223 3.3E-78 T 22-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 SMGD1_RS02150 e43f630b3597f6a6a08f7e97218135be 227 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 56 69 - T 22-04-2016 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 SMGD1_RS02150 e43f630b3597f6a6a08f7e97218135be 227 SUPERFAMILY SSF51366 2 226 2.92E-63 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 SMGD1_RS02150 e43f630b3597f6a6a08f7e97218135be 227 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 1 227 30.186 T 22-04-2016 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 SMGD1_RS02150 e43f630b3597f6a6a08f7e97218135be 227 PANTHER PTHR32119:SF2 1 227 1.9E-71 T 22-04-2016 SMGD1_RS02150 e43f630b3597f6a6a08f7e97218135be 227 Gene3D G3DSA:3.20.20.70 2 226 2.8E-72 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMGD1_RS10495 cbaf2ad103d83597821aff3581de8691 659 SMART SM00283 361 608 7.2E-62 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SMGD1_RS10495 cbaf2ad103d83597821aff3581de8691 659 PANTHER PTHR32089 215 221 6.2E-67 T 22-04-2016 SMGD1_RS10495 cbaf2ad103d83597821aff3581de8691 659 PANTHER PTHR32089 364 608 6.2E-67 T 22-04-2016 SMGD1_RS10495 cbaf2ad103d83597821aff3581de8691 659 Gene3D G3DSA:3.30.450.20 191 327 1.6E-6 T 22-04-2016 SMGD1_RS10495 cbaf2ad103d83597821aff3581de8691 659 Gene3D G3DSA:1.10.287.950 376 580 4.4E-50 T 22-04-2016 SMGD1_RS10495 cbaf2ad103d83597821aff3581de8691 659 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 422 605 4.2E-48 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SMGD1_RS10495 cbaf2ad103d83597821aff3581de8691 659 SUPERFAMILY SSF58104 360 613 1.05E-59 T 22-04-2016 SMGD1_RS04895 94b0fc5c0a6ac83d6e4c672ea95bcfb2 82 PANTHER PTHR10744 5 74 6.8E-23 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS04895 94b0fc5c0a6ac83d6e4c672ea95bcfb2 82 ProSitePatterns PS00056 Ribosomal protein S17 signature. 55 67 - T 22-04-2016 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS04895 94b0fc5c0a6ac83d6e4c672ea95bcfb2 82 SUPERFAMILY SSF50249 4 81 1.41E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMGD1_RS04895 94b0fc5c0a6ac83d6e4c672ea95bcfb2 82 PRINTS PR00973 Ribosomal protein S17 family signature 65 72 1.9E-11 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS04895 94b0fc5c0a6ac83d6e4c672ea95bcfb2 82 PRINTS PR00973 Ribosomal protein S17 family signature 55 65 1.9E-11 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS04895 94b0fc5c0a6ac83d6e4c672ea95bcfb2 82 PRINTS PR00973 Ribosomal protein S17 family signature 23 46 1.9E-11 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS04895 94b0fc5c0a6ac83d6e4c672ea95bcfb2 82 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 4 72 3.0E-30 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS04895 94b0fc5c0a6ac83d6e4c672ea95bcfb2 82 Pfam PF00366 Ribosomal protein S17 9 74 4.3E-25 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS04895 94b0fc5c0a6ac83d6e4c672ea95bcfb2 82 Gene3D G3DSA:2.40.50.140 4 79 4.6E-26 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMGD1_RS04895 94b0fc5c0a6ac83d6e4c672ea95bcfb2 82 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 4 74 6.4E-29 T 22-04-2016 IPR019984 Ribosomal protein S17, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS04895 94b0fc5c0a6ac83d6e4c672ea95bcfb2 82 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 2 80 21.592 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS07545 3a47b1f007341c7ce16de26e4326c2e2 183 Pfam PF04368 Protein of unknown function (DUF507) 1 182 1.4E-67 T 22-04-2016 IPR007463 Protein of unknown function DUF507 SMGD1_RS07290 66e251f724283be1d7d141430bd366bd 348 PANTHER PTHR37326 6 333 8.3E-97 T 22-04-2016 SMGD1_RS07290 66e251f724283be1d7d141430bd366bd 348 Gene3D G3DSA:3.40.630.10 34 224 2.5E-24 T 22-04-2016 SMGD1_RS07290 66e251f724283be1d7d141430bd366bd 348 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 45 315 2.7E-55 T 22-04-2016 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 SMGD1_RS07290 66e251f724283be1d7d141430bd366bd 348 PIRSF PIRSF039012 3 321 4.9E-81 T 22-04-2016 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 SMGD1_RS07290 66e251f724283be1d7d141430bd366bd 348 PANTHER PTHR37326:SF1 6 333 8.3E-97 T 22-04-2016 SMGD1_RS07290 66e251f724283be1d7d141430bd366bd 348 SUPERFAMILY SSF53187 31 315 4.96E-73 T 22-04-2016 SMGD1_RS03815 77079a32a25d9a16572c625796c52112 371 Pfam PF01546 Peptidase family M20/M25/M40 67 356 1.6E-20 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 SMGD1_RS03815 77079a32a25d9a16572c625796c52112 371 PIRSF PIRSF037238 1 361 1.1E-92 T 22-04-2016 IPR017150 Peptidase M20, glutamate carboxypeptidase SMGD1_RS03815 77079a32a25d9a16572c625796c52112 371 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 66 75 - T 22-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 SMGD1_RS03815 77079a32a25d9a16572c625796c52112 371 Pfam PF07687 Peptidase dimerisation domain 166 267 1.3E-16 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain SMGD1_RS03815 77079a32a25d9a16572c625796c52112 371 PANTHER PTHR11014 2 366 1.4E-59 T 22-04-2016 SMGD1_RS03815 77079a32a25d9a16572c625796c52112 371 Gene3D G3DSA:3.30.70.360 179 272 4.5E-21 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain SMGD1_RS03815 77079a32a25d9a16572c625796c52112 371 Gene3D G3DSA:3.40.630.10 303 361 4.0E-43 T 22-04-2016 SMGD1_RS03815 77079a32a25d9a16572c625796c52112 371 Gene3D G3DSA:3.40.630.10 3 178 4.0E-43 T 22-04-2016 SMGD1_RS03815 77079a32a25d9a16572c625796c52112 371 SUPERFAMILY SSF53187 3 178 5.24E-43 T 22-04-2016 SMGD1_RS03815 77079a32a25d9a16572c625796c52112 371 SUPERFAMILY SSF53187 286 359 5.24E-43 T 22-04-2016 SMGD1_RS03815 77079a32a25d9a16572c625796c52112 371 PANTHER PTHR11014:SF64 2 366 1.4E-59 T 22-04-2016 SMGD1_RS03815 77079a32a25d9a16572c625796c52112 371 SUPERFAMILY SSF55031 169 273 7.18E-19 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain SMGD1_RS12070 cc2ed07ca369e7af321f16d3e75116f2 230 SUPERFAMILY SSF46894 128 227 2.07E-24 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SMGD1_RS12070 cc2ed07ca369e7af321f16d3e75116f2 230 PANTHER PTHR26402 5 229 3.2E-75 T 22-04-2016 SMGD1_RS12070 cc2ed07ca369e7af321f16d3e75116f2 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 226 2.8E-22 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMGD1_RS12070 cc2ed07ca369e7af321f16d3e75116f2 230 SMART SM00448 5 115 2.8E-36 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS12070 cc2ed07ca369e7af321f16d3e75116f2 230 PANTHER PTHR26402:SF292 5 229 3.2E-75 T 22-04-2016 SMGD1_RS12070 cc2ed07ca369e7af321f16d3e75116f2 230 Gene3D G3DSA:1.10.10.10 129 228 2.9E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMGD1_RS12070 cc2ed07ca369e7af321f16d3e75116f2 230 SMART SM00862 150 226 1.0E-22 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMGD1_RS12070 cc2ed07ca369e7af321f16d3e75116f2 230 Pfam PF00072 Response regulator receiver domain 7 116 5.3E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS12070 cc2ed07ca369e7af321f16d3e75116f2 230 Gene3D G3DSA:3.40.50.2300 3 127 7.9E-37 T 22-04-2016 SMGD1_RS12070 cc2ed07ca369e7af321f16d3e75116f2 230 SUPERFAMILY SSF52172 4 130 4.84E-36 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS00790 2d32bdf623b06ba2fddeef0ad13228aa 307 Gene3D G3DSA:3.40.50.1000 124 177 6.9E-4 T 22-04-2016 IPR023214 HAD-like domain SMGD1_RS00790 2d32bdf623b06ba2fddeef0ad13228aa 307 SUPERFAMILY SSF52540 62 163 3.99E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS00790 2d32bdf623b06ba2fddeef0ad13228aa 307 PANTHER PTHR30160:SF13 20 276 1.1E-16 T 22-04-2016 SMGD1_RS00790 2d32bdf623b06ba2fddeef0ad13228aa 307 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 8 299 21.68 T 22-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 SMGD1_RS00790 2d32bdf623b06ba2fddeef0ad13228aa 307 PANTHER PTHR30160 20 276 1.1E-16 T 22-04-2016 SMGD1_RS00790 2d32bdf623b06ba2fddeef0ad13228aa 307 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 24 194 8.1E-34 T 22-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 SMGD1_RS00790 2d32bdf623b06ba2fddeef0ad13228aa 307 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 207 297 1.7E-7 T 22-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 SMGD1_RS02690 55e00c860e4d457b5e755a15f6244e3c 465 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 16 439 6.7E-204 T 22-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 SMGD1_RS02690 55e00c860e4d457b5e755a15f6244e3c 465 PANTHER PTHR30557 1 451 6.7E-294 T 22-04-2016 SMGD1_RS02690 55e00c860e4d457b5e755a15f6244e3c 465 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 15 442 56.748 T 22-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 SMGD1_RS02690 55e00c860e4d457b5e755a15f6244e3c 465 PANTHER PTHR30557:SF1 1 451 6.7E-294 T 22-04-2016 SMGD1_RS02690 55e00c860e4d457b5e755a15f6244e3c 465 Pfam PF01964 Radical SAM ThiC family 16 436 3.4E-195 T 22-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 SMGD1_RS08445 8e95482b55e1208a0cdba29d80428518 204 PANTHER PTHR10849 9 169 1.7E-36 T 22-04-2016 SMGD1_RS08445 8e95482b55e1208a0cdba29d80428518 204 Pfam PF12838 4Fe-4S dicluster domain 91 143 1.8E-10 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SMGD1_RS08445 8e95482b55e1208a0cdba29d80428518 204 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 131 142 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SMGD1_RS08445 8e95482b55e1208a0cdba29d80428518 204 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 37 195 25.405 T 22-04-2016 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 SMGD1_RS08445 8e95482b55e1208a0cdba29d80428518 204 SUPERFAMILY SSF54862 64 165 4.18E-22 T 22-04-2016 SMGD1_RS08445 8e95482b55e1208a0cdba29d80428518 204 Gene3D G3DSA:3.30.70.20 63 148 3.5E-17 T 22-04-2016 SMGD1_RS08445 8e95482b55e1208a0cdba29d80428518 204 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 46 163 4.4E-38 T 22-04-2016 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 SMGD1_RS03240 db69bc478bf377fc497b5b08dab04448 62 PANTHER PTHR39080:SF1 2 60 1.2E-15 T 22-04-2016 SMGD1_RS03240 db69bc478bf377fc497b5b08dab04448 62 Pfam PF00830 Ribosomal L28 family 3 60 2.2E-22 T 22-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 SMGD1_RS03240 db69bc478bf377fc497b5b08dab04448 62 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 57 8.6E-24 T 22-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS03240 db69bc478bf377fc497b5b08dab04448 62 Gene3D G3DSA:2.30.170.40 2 61 5.0E-23 T 22-04-2016 SMGD1_RS03240 db69bc478bf377fc497b5b08dab04448 62 PANTHER PTHR39080 2 60 1.2E-15 T 22-04-2016 SMGD1_RS03240 db69bc478bf377fc497b5b08dab04448 62 SUPERFAMILY SSF143800 1 61 1.37E-22 T 22-04-2016 SMGD1_RS03240 db69bc478bf377fc497b5b08dab04448 62 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 61 19.366 T 22-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS12710 a2a38c48cf64c9260d1b04d797a01820 205 PANTHER PTHR39327:SF1 3 177 1.8E-50 T 22-04-2016 SMGD1_RS12710 a2a38c48cf64c9260d1b04d797a01820 205 Pfam PF06035 Bacterial transglutaminase-like cysteine proteinase BTLCP 54 165 7.2E-16 T 22-04-2016 IPR010319 Transglutaminase-like cysteine peptidase, predicted SMGD1_RS12710 a2a38c48cf64c9260d1b04d797a01820 205 PANTHER PTHR39327 3 177 1.8E-50 T 22-04-2016 SMGD1_RS12710 a2a38c48cf64c9260d1b04d797a01820 205 SUPERFAMILY SSF54001 27 122 4.51E-7 T 22-04-2016 SMGD1_RS05590 c25b2d1f734d41ccf5f45c2526f1b0fe 296 SUPERFAMILY SSF58104 36 292 4.19E-50 T 22-04-2016 SMGD1_RS05590 c25b2d1f734d41ccf5f45c2526f1b0fe 296 PANTHER PTHR32089 40 281 5.9E-36 T 22-04-2016 SMGD1_RS05590 c25b2d1f734d41ccf5f45c2526f1b0fe 296 Gene3D G3DSA:1.10.287.950 63 274 2.6E-39 T 22-04-2016 SMGD1_RS05590 c25b2d1f734d41ccf5f45c2526f1b0fe 296 SMART SM00283 44 295 1.7E-18 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SMGD1_RS05590 c25b2d1f734d41ccf5f45c2526f1b0fe 296 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 109 282 1.3E-32 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SMGD1_RS13280 8d8c9ba221c2a7de6ebe758131b176e9 724 Pfam PF03971 Monomeric isocitrate dehydrogenase 3 722 0.0 T 22-04-2016 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 SMGD1_RS13280 8d8c9ba221c2a7de6ebe758131b176e9 724 TIGRFAM TIGR00178 monomer_idh: isocitrate dehydrogenase, NADP-dependent 1 724 8.4E-297 T 22-04-2016 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 SMGD1_RS13280 8d8c9ba221c2a7de6ebe758131b176e9 724 PANTHER PTHR36999 1 724 1.3E-284 T 22-04-2016 SMGD1_RS13280 8d8c9ba221c2a7de6ebe758131b176e9 724 Gene3D G3DSA:3.40.718.10 418 630 6.0E-20 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 SMGD1_RS13280 8d8c9ba221c2a7de6ebe758131b176e9 724 Gene3D G3DSA:3.40.718.10 164 282 2.9E-6 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 SMGD1_RS13280 8d8c9ba221c2a7de6ebe758131b176e9 724 SUPERFAMILY SSF53659 2 723 5.4E-288 T 22-04-2016 SMGD1_RS11820 5e79b79b5cceea194b1471383977299b 179 SUPERFAMILY SSF52949 1 172 9.25E-24 T 22-04-2016 SMGD1_RS11820 5e79b79b5cceea194b1471383977299b 179 Pfam PF01661 Macro domain 19 141 3.6E-13 T 22-04-2016 IPR002589 Macro domain SMGD1_RS11820 5e79b79b5cceea194b1471383977299b 179 SMART SM00506 2 146 4.1E-7 T 22-04-2016 IPR002589 Macro domain SMGD1_RS11820 5e79b79b5cceea194b1471383977299b 179 Gene3D G3DSA:3.40.220.10 2 175 1.4E-23 T 22-04-2016 SMGD1_RS08615 0811767e8a7055b32aa7a6f07dcef586 226 PANTHER PTHR38589 15 221 5.8E-27 T 22-04-2016 SMGD1_RS08615 0811767e8a7055b32aa7a6f07dcef586 226 PANTHER PTHR38589:SF1 15 221 5.8E-27 T 22-04-2016 SMGD1_RS08615 0811767e8a7055b32aa7a6f07dcef586 226 Pfam PF03734 L,D-transpeptidase catalytic domain 32 201 4.2E-6 T 22-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 SMGD1_RS10810 ee6d61b06c0c03df52f20d1e42ba7be3 309 SMART SM00327 83 266 1.3E-14 T 22-04-2016 IPR002035 von Willebrand factor, type A SMGD1_RS10810 ee6d61b06c0c03df52f20d1e42ba7be3 309 SUPERFAMILY SSF53300 68 265 5.93E-29 T 22-04-2016 IPR002035 von Willebrand factor, type A SMGD1_RS10810 ee6d61b06c0c03df52f20d1e42ba7be3 309 Gene3D G3DSA:3.40.50.410 82 266 4.0E-22 T 22-04-2016 IPR002035 von Willebrand factor, type A SMGD1_RS10810 ee6d61b06c0c03df52f20d1e42ba7be3 309 PANTHER PTHR22550 54 308 1.4E-32 T 22-04-2016 SMGD1_RS10810 ee6d61b06c0c03df52f20d1e42ba7be3 309 Pfam PF00092 von Willebrand factor type A domain 86 263 5.9E-20 T 22-04-2016 IPR002035 von Willebrand factor, type A SMGD1_RS10810 ee6d61b06c0c03df52f20d1e42ba7be3 309 PANTHER PTHR22550:SF12 54 308 1.4E-32 T 22-04-2016 SMGD1_RS04865 6aa6606c90f35aa944cde0fe8b451b61 178 PANTHER PTHR11655:SF14 1 178 1.8E-68 T 22-04-2016 SMGD1_RS04865 6aa6606c90f35aa944cde0fe8b451b61 178 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 153 161 - T 22-04-2016 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS04865 6aa6606c90f35aa944cde0fe8b451b61 178 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 175 2.9E-63 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 SMGD1_RS04865 6aa6606c90f35aa944cde0fe8b451b61 178 SUPERFAMILY SSF56053 83 175 3.27E-33 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 SMGD1_RS04865 6aa6606c90f35aa944cde0fe8b451b61 178 SUPERFAMILY SSF56053 2 82 2.13E-15 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 SMGD1_RS04865 6aa6606c90f35aa944cde0fe8b451b61 178 PRINTS PR00059 Ribosomal protein L6 signature 140 161 6.7E-31 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 SMGD1_RS04865 6aa6606c90f35aa944cde0fe8b451b61 178 PRINTS PR00059 Ribosomal protein L6 signature 71 96 6.7E-31 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 SMGD1_RS04865 6aa6606c90f35aa944cde0fe8b451b61 178 PRINTS PR00059 Ribosomal protein L6 signature 99 115 6.7E-31 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 SMGD1_RS04865 6aa6606c90f35aa944cde0fe8b451b61 178 Gene3D G3DSA:3.90.930.12 83 176 5.7E-37 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 SMGD1_RS04865 6aa6606c90f35aa944cde0fe8b451b61 178 Pfam PF00347 Ribosomal protein L6 91 163 1.0E-16 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 SMGD1_RS04865 6aa6606c90f35aa944cde0fe8b451b61 178 Pfam PF00347 Ribosomal protein L6 14 82 1.5E-6 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 SMGD1_RS04865 6aa6606c90f35aa944cde0fe8b451b61 178 Gene3D G3DSA:3.90.930.12 2 82 4.1E-17 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 SMGD1_RS04865 6aa6606c90f35aa944cde0fe8b451b61 178 PIRSF PIRSF002162 1 176 4.9E-42 T 22-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 SMGD1_RS04865 6aa6606c90f35aa944cde0fe8b451b61 178 PANTHER PTHR11655 1 178 1.8E-68 T 22-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 SMGD1_RS01840 b06df9e3e5a0c36887a5bc820d157ec6 143 Pfam PF01584 CheW-like domain 4 140 1.3E-21 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SMGD1_RS01840 b06df9e3e5a0c36887a5bc820d157ec6 143 SMART SM00260 1 139 2.8E-11 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SMGD1_RS01840 b06df9e3e5a0c36887a5bc820d157ec6 143 SUPERFAMILY SSF50341 2 137 3.79E-20 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SMGD1_RS01840 b06df9e3e5a0c36887a5bc820d157ec6 143 PANTHER PTHR22617 1 136 6.2E-14 T 22-04-2016 SMGD1_RS11135 06db5aab1aa99376e5db0b5e63635a3a 172 Gene3D G3DSA:2.40.128.110 16 169 5.4E-27 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like SMGD1_RS11135 06db5aab1aa99376e5db0b5e63635a3a 172 PANTHER PTHR34406:SF1 4 172 3.1E-12 T 22-04-2016 SMGD1_RS11135 06db5aab1aa99376e5db0b5e63635a3a 172 Pfam PF04264 YceI-like domain 21 168 6.1E-23 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like SMGD1_RS11135 06db5aab1aa99376e5db0b5e63635a3a 172 PANTHER PTHR34406 4 172 3.1E-12 T 22-04-2016 SMGD1_RS11135 06db5aab1aa99376e5db0b5e63635a3a 172 SUPERFAMILY SSF101874 16 169 3.4E-26 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like SMGD1_RS11135 06db5aab1aa99376e5db0b5e63635a3a 172 SMART SM00867 18 170 5.3E-19 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like SMGD1_RS05600 d7cd5c549b3cfbcb87a4c3211ba51026 671 PANTHER PTHR33121:SF13 370 671 2.3E-88 T 22-04-2016 SMGD1_RS05600 d7cd5c549b3cfbcb87a4c3211ba51026 671 Pfam PF00990 Diguanylate cyclase, GGDEF domain 247 400 6.4E-46 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS05600 d7cd5c549b3cfbcb87a4c3211ba51026 671 Gene3D G3DSA:3.30.70.270 248 409 1.1E-52 T 22-04-2016 SMGD1_RS05600 d7cd5c549b3cfbcb87a4c3211ba51026 671 Pfam PF00563 EAL domain 421 656 1.4E-72 T 22-04-2016 IPR001633 EAL domain SMGD1_RS05600 d7cd5c549b3cfbcb87a4c3211ba51026 671 SMART SM00267 236 405 5.4E-54 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS05600 d7cd5c549b3cfbcb87a4c3211ba51026 671 PANTHER PTHR33121 370 671 2.3E-88 T 22-04-2016 SMGD1_RS05600 d7cd5c549b3cfbcb87a4c3211ba51026 671 SUPERFAMILY SSF141868 420 666 1.57E-89 T 22-04-2016 IPR001633 EAL domain SMGD1_RS05600 d7cd5c549b3cfbcb87a4c3211ba51026 671 SMART SM00052 415 661 4.5E-113 T 22-04-2016 IPR001633 EAL domain SMGD1_RS05600 d7cd5c549b3cfbcb87a4c3211ba51026 671 Pfam PF11845 Protein of unknown function (DUF3365) 14 194 2.3E-21 T 22-04-2016 IPR021796 Protein of unknown function DUF3365 SMGD1_RS05600 d7cd5c549b3cfbcb87a4c3211ba51026 671 SUPERFAMILY SSF55073 252 406 5.73E-46 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS05600 d7cd5c549b3cfbcb87a4c3211ba51026 671 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 243 403 1.7E-42 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS05600 d7cd5c549b3cfbcb87a4c3211ba51026 671 Gene3D G3DSA:3.20.20.450 418 665 6.9E-97 T 22-04-2016 IPR001633 EAL domain SMGD1_RS00335 884f65348ea69a03a68f8363dd2fb63d 785 SUPERFAMILY SSF55874 634 781 2.23E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS00335 884f65348ea69a03a68f8363dd2fb63d 785 SMART SM00086 505 548 0.0087 T 22-04-2016 IPR001610 PAC motif SMGD1_RS00335 884f65348ea69a03a68f8363dd2fb63d 785 SMART SM00086 372 414 2.5E-7 T 22-04-2016 IPR001610 PAC motif SMGD1_RS00335 884f65348ea69a03a68f8363dd2fb63d 785 SUPERFAMILY SSF55785 411 546 2.44E-14 T 22-04-2016 IPR000014 PAS domain SMGD1_RS00335 884f65348ea69a03a68f8363dd2fb63d 785 SMART SM00091 426 490 0.0015 T 22-04-2016 IPR000014 PAS domain SMGD1_RS00335 884f65348ea69a03a68f8363dd2fb63d 785 SMART SM00091 299 365 3.8E-12 T 22-04-2016 IPR000014 PAS domain SMGD1_RS00335 884f65348ea69a03a68f8363dd2fb63d 785 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 675 782 3.3E-16 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS00335 884f65348ea69a03a68f8363dd2fb63d 785 Pfam PF08447 PAS fold 323 407 2.3E-15 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 SMGD1_RS00335 884f65348ea69a03a68f8363dd2fb63d 785 Gene3D G3DSA:3.30.565.10 635 781 3.6E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS00335 884f65348ea69a03a68f8363dd2fb63d 785 PRINTS PR00344 Bacterial sensor protein C-terminal signature 745 763 1.1E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS00335 884f65348ea69a03a68f8363dd2fb63d 785 PRINTS PR00344 Bacterial sensor protein C-terminal signature 732 742 1.1E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS00335 884f65348ea69a03a68f8363dd2fb63d 785 PRINTS PR00344 Bacterial sensor protein C-terminal signature 714 728 1.1E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS00335 884f65348ea69a03a68f8363dd2fb63d 785 PRINTS PR00344 Bacterial sensor protein C-terminal signature 769 782 1.1E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS00335 884f65348ea69a03a68f8363dd2fb63d 785 Gene3D G3DSA:3.30.450.20 297 429 5.2E-28 T 22-04-2016 SMGD1_RS00335 884f65348ea69a03a68f8363dd2fb63d 785 SMART SM00387 673 785 5.9E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS00335 884f65348ea69a03a68f8363dd2fb63d 785 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 422 554 1.4E-9 T 22-04-2016 IPR000014 PAS domain SMGD1_RS00335 884f65348ea69a03a68f8363dd2fb63d 785 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 296 421 3.4E-29 T 22-04-2016 IPR000014 PAS domain SMGD1_RS00335 884f65348ea69a03a68f8363dd2fb63d 785 Gene3D G3DSA:3.30.450.20 430 546 4.7E-14 T 22-04-2016 SMGD1_RS00335 884f65348ea69a03a68f8363dd2fb63d 785 SUPERFAMILY SSF55785 305 416 9.99E-25 T 22-04-2016 IPR000014 PAS domain SMGD1_RS00335 884f65348ea69a03a68f8363dd2fb63d 785 Pfam PF13426 PAS domain 437 547 2.8E-7 T 22-04-2016 IPR000014 PAS domain SMGD1_RS00335 884f65348ea69a03a68f8363dd2fb63d 785 PANTHER PTHR24423 290 781 1.3E-76 T 22-04-2016 SMGD1_RS00335 884f65348ea69a03a68f8363dd2fb63d 785 SUPERFAMILY SSF47384 559 631 1.12E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS12275 4a2575fcd2163dd77622cc36f775f772 83 Gene3D G3DSA:3.40.1690.10 3 79 4.9E-24 T 22-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal SMGD1_RS12275 4a2575fcd2163dd77622cc36f775f772 83 PANTHER PTHR30531 2 78 2.6E-25 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 SMGD1_RS12275 4a2575fcd2163dd77622cc36f775f772 83 SUPERFAMILY SSF160544 3 79 2.35E-21 T 22-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal SMGD1_RS12275 4a2575fcd2163dd77622cc36f775f772 83 Pfam PF01312 FlhB HrpN YscU SpaS Family 4 76 7.5E-18 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 SMGD1_RS04115 66900573b85ae840ee60d0af547e265a 154 Gene3D G3DSA:3.40.50.960 11 153 3.2E-57 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SMGD1_RS04115 66900573b85ae840ee60d0af547e265a 154 PANTHER PTHR21058 1 154 7.7E-68 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SMGD1_RS04115 66900573b85ae840ee60d0af547e265a 154 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 14 151 2.7E-51 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SMGD1_RS04115 66900573b85ae840ee60d0af547e265a 154 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 9 154 29.142 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SMGD1_RS04115 66900573b85ae840ee60d0af547e265a 154 SUPERFAMILY SSF52121 8 154 1.7E-56 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SMGD1_RS04115 66900573b85ae840ee60d0af547e265a 154 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 15 150 2.3E-55 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SMGD1_RS06025 ed523e1ebd6bf9c634c8d18ab3abcfa4 181 Gene3D G3DSA:3.40.50.150 3 56 1.3E-8 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS06025 ed523e1ebd6bf9c634c8d18ab3abcfa4 181 Gene3D G3DSA:3.40.50.150 62 174 8.8E-11 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS06025 ed523e1ebd6bf9c634c8d18ab3abcfa4 181 Pfam PF01564 Spermine/spermidine synthase 3 47 2.5E-6 T 22-04-2016 SMGD1_RS06025 ed523e1ebd6bf9c634c8d18ab3abcfa4 181 SUPERFAMILY SSF53335 3 174 2.79E-20 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS11225 2a9210134e613c7aaa367efe687f2359 287 Gene3D G3DSA:4.10.480.10 167 244 1.4E-25 T 22-04-2016 IPR027394 Cytochrome-c3 hydrogenase, C-terminal SMGD1_RS11225 2a9210134e613c7aaa367efe687f2359 287 Gene3D G3DSA:3.40.50.700 1 166 5.6E-26 T 22-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 SMGD1_RS11225 2a9210134e613c7aaa367efe687f2359 287 Pfam PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal 167 241 1.2E-23 T 22-04-2016 IPR027394 Cytochrome-c3 hydrogenase, C-terminal SMGD1_RS11225 2a9210134e613c7aaa367efe687f2359 287 PANTHER PTHR30013 1 287 1.7E-69 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SMGD1_RS11225 2a9210134e613c7aaa367efe687f2359 287 SUPERFAMILY SSF56770 1 244 5.1E-56 T 22-04-2016 SMGD1_RS11225 2a9210134e613c7aaa367efe687f2359 287 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 9 148 7.6E-20 T 22-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 SMGD1_RS11225 2a9210134e613c7aaa367efe687f2359 287 PANTHER PTHR30013:SF5 1 287 1.7E-69 T 22-04-2016 SMGD1_RS11225 2a9210134e613c7aaa367efe687f2359 287 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 193 219 6.0E-7 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SMGD1_RS11225 2a9210134e613c7aaa367efe687f2359 287 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 77 91 6.0E-7 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SMGD1_RS11225 2a9210134e613c7aaa367efe687f2359 287 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 220 233 6.0E-7 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SMGD1_RS11225 2a9210134e613c7aaa367efe687f2359 287 PIRSF PIRSF000310 1 287 4.0E-56 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SMGD1_RS02270 c642762681fd96b5809f9924358a8bf9 83 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 18 76 2.4E-18 T 22-04-2016 IPR004509 Competence protein ComEA, helix-hairpin-helix domain SMGD1_RS02270 c642762681fd96b5809f9924358a8bf9 83 SUPERFAMILY SSF47781 17 77 1.1E-21 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 SMGD1_RS02270 c642762681fd96b5809f9924358a8bf9 83 Gene3D G3DSA:1.10.150.280 14 76 1.1E-19 T 22-04-2016 SMGD1_RS02270 c642762681fd96b5809f9924358a8bf9 83 PANTHER PTHR21180 18 73 6.5E-17 T 22-04-2016 SMGD1_RS02270 c642762681fd96b5809f9924358a8bf9 83 SMART SM00278 26 45 0.023 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 SMGD1_RS02270 c642762681fd96b5809f9924358a8bf9 83 SMART SM00278 55 74 410.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 SMGD1_RS02270 c642762681fd96b5809f9924358a8bf9 83 Pfam PF12836 Helix-hairpin-helix motif 17 75 5.2E-18 T 22-04-2016 SMGD1_RS02380 af768ab760bea412616825340267a75f 381 PANTHER PTHR18964:SF2 204 378 1.8E-191 T 22-04-2016 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 KEGG: 00520+5.1.3.14|MetaCyc: PWY-7335 SMGD1_RS02380 af768ab760bea412616825340267a75f 381 PANTHER PTHR18964:SF2 3 188 1.8E-191 T 22-04-2016 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 KEGG: 00520+5.1.3.14|MetaCyc: PWY-7335 SMGD1_RS02380 af768ab760bea412616825340267a75f 381 PANTHER PTHR18964 204 378 1.8E-191 T 22-04-2016 SMGD1_RS02380 af768ab760bea412616825340267a75f 381 PANTHER PTHR18964 3 188 1.8E-191 T 22-04-2016 SMGD1_RS02380 af768ab760bea412616825340267a75f 381 SUPERFAMILY SSF53756 3 378 1.73E-131 T 22-04-2016 SMGD1_RS02380 af768ab760bea412616825340267a75f 381 Gene3D G3DSA:3.40.50.2000 219 378 2.4E-61 T 22-04-2016 SMGD1_RS02380 af768ab760bea412616825340267a75f 381 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 5 378 4.6E-153 T 22-04-2016 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 KEGG: 00520+5.1.3.14|MetaCyc: PWY-7335 SMGD1_RS02380 af768ab760bea412616825340267a75f 381 Gene3D G3DSA:3.40.50.2000 3 218 5.7E-84 T 22-04-2016 SMGD1_RS02380 af768ab760bea412616825340267a75f 381 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 29 378 1.5E-120 T 22-04-2016 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain SMGD1_RS03765 4bbb574ba5c2ac5678899b96ada137d6 411 SUPERFAMILY SSF53383 250 409 3.16E-85 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SMGD1_RS03765 4bbb574ba5c2ac5678899b96ada137d6 411 SUPERFAMILY SSF53383 40 223 3.16E-85 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SMGD1_RS03765 4bbb574ba5c2ac5678899b96ada137d6 411 PANTHER PTHR11808 17 231 4.2E-121 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SMGD1_RS03765 4bbb574ba5c2ac5678899b96ada137d6 411 PANTHER PTHR11808 257 409 4.2E-121 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SMGD1_RS03765 4bbb574ba5c2ac5678899b96ada137d6 411 Gene3D G3DSA:3.40.640.10 14 278 1.5E-77 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SMGD1_RS03765 4bbb574ba5c2ac5678899b96ada137d6 411 Gene3D G3DSA:3.90.1150.10 279 409 1.1E-28 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SMGD1_RS03765 4bbb574ba5c2ac5678899b96ada137d6 411 PIRSF PIRSF001434 3 411 7.1E-96 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SMGD1_RS03765 4bbb574ba5c2ac5678899b96ada137d6 411 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 16 409 5.0E-97 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SMGD1_RS01750 c5308ecea95f5ff78ae33f7bd70f297a 269 Gene3D G3DSA:3.20.20.450 31 264 5.0E-64 T 22-04-2016 IPR001633 EAL domain SMGD1_RS01750 c5308ecea95f5ff78ae33f7bd70f297a 269 PANTHER PTHR33121:SF10 19 266 3.5E-57 T 22-04-2016 SMGD1_RS01750 c5308ecea95f5ff78ae33f7bd70f297a 269 PANTHER PTHR33121 19 266 3.5E-57 T 22-04-2016 SMGD1_RS01750 c5308ecea95f5ff78ae33f7bd70f297a 269 Pfam PF00563 EAL domain 35 263 1.6E-59 T 22-04-2016 IPR001633 EAL domain SMGD1_RS01750 c5308ecea95f5ff78ae33f7bd70f297a 269 SUPERFAMILY SSF141868 35 264 3.66E-65 T 22-04-2016 IPR001633 EAL domain SMGD1_RS01750 c5308ecea95f5ff78ae33f7bd70f297a 269 SMART SM00052 28 268 1.0E-50 T 22-04-2016 IPR001633 EAL domain SMGD1_RS02795 250e63a5e2020af50b357168c2394252 236 PANTHER PTHR38568:SF2 3 232 7.1E-93 T 22-04-2016 SMGD1_RS02795 250e63a5e2020af50b357168c2394252 236 PANTHER PTHR38568 3 232 7.1E-93 T 22-04-2016 SMGD1_RS09535 6aec665b5ec6b2c14ab3cd60ac15a792 340 Hamap MF_00435 Ketol-acid reductoisomerase [ilvC]. 3 330 43.647 T 22-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SMGD1_RS09535 6aec665b5ec6b2c14ab3cd60ac15a792 340 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 16 178 1.1E-72 T 22-04-2016 IPR013116 Acetohydroxy acid isomeroreductase, NADPH-binding domain KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SMGD1_RS09535 6aec665b5ec6b2c14ab3cd60ac15a792 340 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 185 328 2.8E-62 T 22-04-2016 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SMGD1_RS09535 6aec665b5ec6b2c14ab3cd60ac15a792 340 Gene3D G3DSA:1.10.1040.10 31 327 6.4E-111 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 SMGD1_RS09535 6aec665b5ec6b2c14ab3cd60ac15a792 340 SUPERFAMILY SSF48179 185 334 8.33E-68 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SMGD1_RS09535 6aec665b5ec6b2c14ab3cd60ac15a792 340 PANTHER PTHR21371 4 339 7.0E-181 T 22-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SMGD1_RS09535 6aec665b5ec6b2c14ab3cd60ac15a792 340 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 16 328 1.5E-129 T 22-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SMGD1_RS09535 6aec665b5ec6b2c14ab3cd60ac15a792 340 SUPERFAMILY SSF51735 4 184 1.26E-70 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS08950 83fcccd9f4a2d225b050263d6154e508 273 SUPERFAMILY SSF51735 4 254 7.62E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS08950 83fcccd9f4a2d225b050263d6154e508 273 PANTHER PTHR24322:SF317 157 189 4.0E-56 T 22-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 SMGD1_RS08950 83fcccd9f4a2d225b050263d6154e508 273 PANTHER PTHR24322:SF317 10 141 4.0E-56 T 22-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 SMGD1_RS08950 83fcccd9f4a2d225b050263d6154e508 273 PIRSF PIRSF000094 1 258 5.1E-113 T 22-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 SMGD1_RS08950 83fcccd9f4a2d225b050263d6154e508 273 Gene3D G3DSA:3.40.50.720 5 199 1.3E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS08950 83fcccd9f4a2d225b050263d6154e508 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 4.46E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMGD1_RS08950 83fcccd9f4a2d225b050263d6154e508 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 4.46E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMGD1_RS08950 83fcccd9f4a2d225b050263d6154e508 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 4.46E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMGD1_RS08950 83fcccd9f4a2d225b050263d6154e508 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 213 233 4.46E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMGD1_RS08950 83fcccd9f4a2d225b050263d6154e508 273 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 250 5.7E-82 T 22-04-2016 SMGD1_RS08950 83fcccd9f4a2d225b050263d6154e508 273 PANTHER PTHR24322 157 189 4.0E-56 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMGD1_RS08950 83fcccd9f4a2d225b050263d6154e508 273 PANTHER PTHR24322 10 141 4.0E-56 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMGD1_RS08275 df8cf5d42fa5cf6e526b0f19d865aa52 105 Pfam PF07883 Cupin domain 37 103 8.6E-12 T 22-04-2016 IPR013096 Cupin 2, conserved barrel SMGD1_RS08275 df8cf5d42fa5cf6e526b0f19d865aa52 105 Gene3D G3DSA:2.60.120.10 16 105 1.0E-37 T 22-04-2016 IPR014710 RmlC-like jelly roll fold SMGD1_RS08275 df8cf5d42fa5cf6e526b0f19d865aa52 105 SUPERFAMILY SSF51182 6 105 2.04E-22 T 22-04-2016 IPR011051 RmlC-like cupin domain SMGD1_RS05475 66f4728a7ffb1474429eaddf822b6df6 114 Pfam PF08803 Putative mono-oxygenase ydhR 18 112 9.8E-39 T 22-04-2016 IPR014910 Putative monooxygenase YdhR KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.- SMGD1_RS05475 66f4728a7ffb1474429eaddf822b6df6 114 SUPERFAMILY SSF54909 18 109 3.32E-29 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel SMGD1_RS05475 66f4728a7ffb1474429eaddf822b6df6 114 PANTHER PTHR39169:SF1 15 114 2.7E-35 T 22-04-2016 SMGD1_RS05475 66f4728a7ffb1474429eaddf822b6df6 114 PANTHER PTHR39169 15 114 2.7E-35 T 22-04-2016 SMGD1_RS10720 0947f627fdae0836f6c9d3650403e9d4 53 Gene3D G3DSA:2.20.28.10 1 52 4.2E-26 T 22-04-2016 IPR004039 Rubredoxin-type fold SMGD1_RS10720 0947f627fdae0836f6c9d3650403e9d4 53 SUPERFAMILY SSF57802 1 52 1.85E-21 T 22-04-2016 SMGD1_RS10720 0947f627fdae0836f6c9d3650403e9d4 53 PIRSF PIRSF000071 1 53 3.5E-27 T 22-04-2016 IPR024922 Rubredoxin GO:0005506|GO:0009055 SMGD1_RS10720 0947f627fdae0836f6c9d3650403e9d4 53 PRINTS PR00163 Rubredoxin signature 3 19 7.53E-11 T 22-04-2016 IPR024935 Rubredoxin domain GO:0005506 SMGD1_RS10720 0947f627fdae0836f6c9d3650403e9d4 53 PRINTS PR00163 Rubredoxin signature 33 49 7.53E-11 T 22-04-2016 IPR024935 Rubredoxin domain GO:0005506 SMGD1_RS10720 0947f627fdae0836f6c9d3650403e9d4 53 Pfam PF00301 Rubredoxin 3 49 1.9E-22 T 22-04-2016 IPR024935 Rubredoxin domain GO:0005506 SMGD1_RS10720 0947f627fdae0836f6c9d3650403e9d4 53 ProSitePatterns PS00202 Rubredoxin signature. 33 43 - T 22-04-2016 IPR018527 Rubredoxin, iron-binding site GO:0046872 SMGD1_RS02935 d051d4cea77f4cbb798e202931ecdcfc 129 Pfam PF03927 NapD protein 1 76 4.6E-21 T 22-04-2016 IPR005623 Chaperone NapD, nitrate reductase assembly SMGD1_RS03935 0ea7357a46e5a22935ba8618966fd1df 147 SUPERFAMILY SSF52788 1 142 7.2E-43 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily SMGD1_RS03935 0ea7357a46e5a22935ba8618966fd1df 147 PANTHER PTHR11717 1 141 1.1E-41 T 22-04-2016 SMGD1_RS03935 0ea7357a46e5a22935ba8618966fd1df 147 SMART SM00226 2 144 1.5E-45 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily SMGD1_RS03935 0ea7357a46e5a22935ba8618966fd1df 147 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 4 142 7.4E-38 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily SMGD1_RS03935 0ea7357a46e5a22935ba8618966fd1df 147 PANTHER PTHR11717:SF7 1 141 1.1E-41 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 SMGD1_RS03935 0ea7357a46e5a22935ba8618966fd1df 147 Gene3D G3DSA:3.40.50.270 1 142 1.6E-45 T 22-04-2016 SMGD1_RS03935 0ea7357a46e5a22935ba8618966fd1df 147 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 45 61 2.8E-17 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 SMGD1_RS03935 0ea7357a46e5a22935ba8618966fd1df 147 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 79 94 2.8E-17 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 SMGD1_RS03935 0ea7357a46e5a22935ba8618966fd1df 147 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 4 21 2.8E-17 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 SMGD1_RS03935 0ea7357a46e5a22935ba8618966fd1df 147 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 116 131 2.8E-17 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 SMGD1_RS01725 c63925002b3ff2638e152b26f36c49da 315 SUPERFAMILY SSF50998 32 315 1.8E-25 T 22-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily SMGD1_RS01725 c63925002b3ff2638e152b26f36c49da 315 Gene3D G3DSA:2.130.10.10 38 314 1.3E-24 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 SMGD1_RS01725 c63925002b3ff2638e152b26f36c49da 315 SMART SM00320 194 232 6.8 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS01725 c63925002b3ff2638e152b26f36c49da 315 SMART SM00320 275 313 3.1 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 SMGD1_RS03810 3d6b2e7e81840ca912f6cb0f71bad98d 300 Gene3D G3DSA:3.30.1490.20 125 173 2.5E-11 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SMGD1_RS03810 3d6b2e7e81840ca912f6cb0f71bad98d 300 SUPERFAMILY SSF56059 90 293 3.12E-32 T 22-04-2016 SMGD1_RS03810 3d6b2e7e81840ca912f6cb0f71bad98d 300 Gene3D G3DSA:3.30.470.20 174 271 7.1E-19 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SMGD1_RS03810 3d6b2e7e81840ca912f6cb0f71bad98d 300 PANTHER PTHR21621:SF2 21 270 2.0E-28 T 22-04-2016 SMGD1_RS03810 3d6b2e7e81840ca912f6cb0f71bad98d 300 Pfam PF08443 RimK-like ATP-grasp domain 98 287 2.7E-17 T 22-04-2016 IPR013651 ATP-grasp fold, RimK-type SMGD1_RS03810 3d6b2e7e81840ca912f6cb0f71bad98d 300 Gene3D G3DSA:3.40.50.20 18 113 1.6E-6 T 22-04-2016 IPR016185 Pre-ATP-grasp domain SMGD1_RS03810 3d6b2e7e81840ca912f6cb0f71bad98d 300 PANTHER PTHR21621 21 270 2.0E-28 T 22-04-2016 SMGD1_RS09120 b2970adca7f22fc5eb35d08700db1396 424 Gene3D G3DSA:1.10.287.130 192 259 2.6E-4 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS09120 b2970adca7f22fc5eb35d08700db1396 424 SUPERFAMILY SSF47384 190 263 1.75E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS09120 b2970adca7f22fc5eb35d08700db1396 424 Gene3D G3DSA:3.30.450.20 15 152 6.8E-12 T 22-04-2016 SMGD1_RS09120 b2970adca7f22fc5eb35d08700db1396 424 SUPERFAMILY SSF55785 20 143 3.32E-10 T 22-04-2016 IPR000014 PAS domain SMGD1_RS09120 b2970adca7f22fc5eb35d08700db1396 424 PRINTS PR00344 Bacterial sensor protein C-terminal signature 381 399 4.6E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS09120 b2970adca7f22fc5eb35d08700db1396 424 PRINTS PR00344 Bacterial sensor protein C-terminal signature 368 378 4.6E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS09120 b2970adca7f22fc5eb35d08700db1396 424 PRINTS PR00344 Bacterial sensor protein C-terminal signature 350 364 4.6E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS09120 b2970adca7f22fc5eb35d08700db1396 424 PRINTS PR00344 Bacterial sensor protein C-terminal signature 405 418 4.6E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS09120 b2970adca7f22fc5eb35d08700db1396 424 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 306 419 1.1E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS09120 b2970adca7f22fc5eb35d08700db1396 424 SMART SM00387 305 421 4.0E-22 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS09120 b2970adca7f22fc5eb35d08700db1396 424 PANTHER PTHR24423 12 155 9.0E-45 T 22-04-2016 SMGD1_RS09120 b2970adca7f22fc5eb35d08700db1396 424 PANTHER PTHR24423 190 419 9.0E-45 T 22-04-2016 SMGD1_RS09120 b2970adca7f22fc5eb35d08700db1396 424 SUPERFAMILY SSF55874 264 419 3.14E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS09120 b2970adca7f22fc5eb35d08700db1396 424 Pfam PF08448 PAS fold 22 142 8.0E-8 T 22-04-2016 IPR013656 PAS fold-4 SMGD1_RS09120 b2970adca7f22fc5eb35d08700db1396 424 Gene3D G3DSA:3.30.565.10 269 419 4.0E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS04320 73d8e5b4db656ed5f323742d5eeb7a4d 671 Pfam PF07715 TonB-dependent Receptor Plug Domain 29 121 5.5E-8 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMGD1_RS04320 73d8e5b4db656ed5f323742d5eeb7a4d 671 Gene3D G3DSA:2.170.130.10 27 132 1.2E-11 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMGD1_RS04320 73d8e5b4db656ed5f323742d5eeb7a4d 671 Gene3D G3DSA:2.40.170.20 133 671 9.6E-69 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMGD1_RS04320 73d8e5b4db656ed5f323742d5eeb7a4d 671 SUPERFAMILY SSF56935 217 671 9.89E-82 T 22-04-2016 SMGD1_RS04320 73d8e5b4db656ed5f323742d5eeb7a4d 671 SUPERFAMILY SSF56935 29 190 9.89E-82 T 22-04-2016 SMGD1_RS04320 73d8e5b4db656ed5f323742d5eeb7a4d 671 PANTHER PTHR32552:SF12 214 671 2.7E-57 T 22-04-2016 SMGD1_RS04320 73d8e5b4db656ed5f323742d5eeb7a4d 671 PANTHER PTHR32552:SF12 12 191 2.7E-57 T 22-04-2016 SMGD1_RS04320 73d8e5b4db656ed5f323742d5eeb7a4d 671 PANTHER PTHR32552 214 671 2.7E-57 T 22-04-2016 SMGD1_RS04320 73d8e5b4db656ed5f323742d5eeb7a4d 671 PANTHER PTHR32552 12 191 2.7E-57 T 22-04-2016 SMGD1_RS04320 73d8e5b4db656ed5f323742d5eeb7a4d 671 Pfam PF00593 TonB dependent receptor 420 670 2.4E-18 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMGD1_RS07215 57cb3827aea9098c0ace5ee709a10ce3 115 Gene3D G3DSA:1.10.10.10 67 114 4.0E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMGD1_RS11365 bd0dde462fad60b78be8c4dbad8a5850 260 PANTHER PTHR13696 1 260 4.1E-74 T 22-04-2016 SMGD1_RS11365 bd0dde462fad60b78be8c4dbad8a5850 260 Gene3D G3DSA:3.40.50.300 4 260 8.0E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS11365 bd0dde462fad60b78be8c4dbad8a5850 260 SUPERFAMILY SSF52540 1 259 5.34E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS11365 bd0dde462fad60b78be8c4dbad8a5850 260 PANTHER PTHR13696:SF52 1 260 4.1E-74 T 22-04-2016 SMGD1_RS11365 bd0dde462fad60b78be8c4dbad8a5850 260 Pfam PF13614 AAA domain 3 181 1.8E-65 T 22-04-2016 IPR025669 AAA domain SMGD1_RS02540 bcb368fb28d2fcf367190279592b95cb 411 Pfam PF13302 Acetyltransferase (GNAT) domain 20 147 4.1E-19 T 22-04-2016 IPR000182 GNAT domain GO:0008080 SMGD1_RS02540 bcb368fb28d2fcf367190279592b95cb 411 PANTHER PTHR13256 1 167 1.7E-25 T 22-04-2016 SMGD1_RS02540 bcb368fb28d2fcf367190279592b95cb 411 Gene3D G3DSA:3.90.550.10 180 376 1.2E-25 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMGD1_RS02540 bcb368fb28d2fcf367190279592b95cb 411 Gene3D G3DSA:3.40.630.30 4 168 1.2E-29 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMGD1_RS02540 bcb368fb28d2fcf367190279592b95cb 411 SUPERFAMILY SSF55729 3 168 4.91E-28 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMGD1_RS02540 bcb368fb28d2fcf367190279592b95cb 411 Pfam PF02348 Cytidylyltransferase 180 352 1.8E-26 T 22-04-2016 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 SMGD1_RS02540 bcb368fb28d2fcf367190279592b95cb 411 SUPERFAMILY SSF53448 180 373 5.36E-25 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMGD1_RS11850 37f6be9754125894ad794708c612e26b 307 Gene3D G3DSA:3.40.50.2300 146 302 2.6E-33 T 22-04-2016 SMGD1_RS11850 37f6be9754125894ad794708c612e26b 307 SUPERFAMILY SSF53822 26 302 1.85E-62 T 22-04-2016 IPR028082 Periplasmic binding protein-like I SMGD1_RS11850 37f6be9754125894ad794708c612e26b 307 PANTHER PTHR32196 4 300 6.4E-25 T 22-04-2016 SMGD1_RS11850 37f6be9754125894ad794708c612e26b 307 Pfam PF13407 Periplasmic binding protein domain 30 281 5.0E-41 T 22-04-2016 IPR025997 Periplasmic binding protein SMGD1_RS11850 37f6be9754125894ad794708c612e26b 307 Gene3D G3DSA:3.40.50.2300 24 145 5.0E-29 T 22-04-2016 SMGD1_RS11850 37f6be9754125894ad794708c612e26b 307 PANTHER PTHR32196:SF9 4 300 6.4E-25 T 22-04-2016 SMGD1_RS12140 daaa2dea2bbfa36705ba6e29b6721cee 137 Pfam PF00072 Response regulator receiver domain 18 126 8.7E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS12140 daaa2dea2bbfa36705ba6e29b6721cee 137 Gene3D G3DSA:3.40.50.2300 14 134 2.1E-33 T 22-04-2016 SMGD1_RS12140 daaa2dea2bbfa36705ba6e29b6721cee 137 SMART SM00448 15 126 3.3E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS12140 daaa2dea2bbfa36705ba6e29b6721cee 137 PANTHER PTHR24423 12 137 4.3E-30 T 22-04-2016 SMGD1_RS12140 daaa2dea2bbfa36705ba6e29b6721cee 137 SUPERFAMILY SSF52172 14 132 8.97E-33 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS09435 13ad4fff07b61d661ce96a4e30ed15d3 231 SUPERFAMILY SSF55073 24 172 6.67E-5 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS00760 ed63aaf7f4595a23835e1a6b3d60d0ee 434 Gene3D G3DSA:3.40.50.800 334 434 4.9E-20 T 22-04-2016 IPR004154 Anticodon-binding SMGD1_RS00760 ed63aaf7f4595a23835e1a6b3d60d0ee 434 Gene3D G3DSA:3.30.930.10 273 333 1.7E-88 T 22-04-2016 SMGD1_RS00760 ed63aaf7f4595a23835e1a6b3d60d0ee 434 Gene3D G3DSA:3.30.930.10 1 227 1.7E-88 T 22-04-2016 SMGD1_RS00760 ed63aaf7f4595a23835e1a6b3d60d0ee 434 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 8.9E-13 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 SMGD1_RS00760 ed63aaf7f4595a23835e1a6b3d60d0ee 434 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 8.9E-13 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 SMGD1_RS00760 ed63aaf7f4595a23835e1a6b3d60d0ee 434 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 8.9E-13 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 SMGD1_RS00760 ed63aaf7f4595a23835e1a6b3d60d0ee 434 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 8.9E-13 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 SMGD1_RS00760 ed63aaf7f4595a23835e1a6b3d60d0ee 434 Pfam PF03129 Anticodon binding domain 344 431 6.1E-16 T 22-04-2016 IPR004154 Anticodon-binding SMGD1_RS00760 ed63aaf7f4595a23835e1a6b3d60d0ee 434 SUPERFAMILY SSF55681 273 343 1.49E-84 T 22-04-2016 SMGD1_RS00760 ed63aaf7f4595a23835e1a6b3d60d0ee 434 SUPERFAMILY SSF55681 10 237 1.49E-84 T 22-04-2016 SMGD1_RS00760 ed63aaf7f4595a23835e1a6b3d60d0ee 434 PANTHER PTHR11451 4 244 1.6E-131 T 22-04-2016 SMGD1_RS00760 ed63aaf7f4595a23835e1a6b3d60d0ee 434 PANTHER PTHR11451 265 434 1.6E-131 T 22-04-2016 SMGD1_RS00760 ed63aaf7f4595a23835e1a6b3d60d0ee 434 SUPERFAMILY SSF52954 329 434 3.17E-23 T 22-04-2016 IPR004154 Anticodon-binding SMGD1_RS00760 ed63aaf7f4595a23835e1a6b3d60d0ee 434 PANTHER PTHR11451:SF3 4 244 1.6E-131 T 22-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 SMGD1_RS00760 ed63aaf7f4595a23835e1a6b3d60d0ee 434 PANTHER PTHR11451:SF3 265 434 1.6E-131 T 22-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 SMGD1_RS00760 ed63aaf7f4595a23835e1a6b3d60d0ee 434 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 256 3.6E-110 T 22-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 SMGD1_RS00760 ed63aaf7f4595a23835e1a6b3d60d0ee 434 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 325 4.4E-46 T 22-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMGD1_RS01795 582977f05aebc274a1d14626c51c3f1f 261 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 1 260 34.541 T 22-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 SMGD1_RS01795 582977f05aebc274a1d14626c51c3f1f 261 SUPERFAMILY SSF51366 11 260 6.12E-84 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 SMGD1_RS01795 582977f05aebc274a1d14626c51c3f1f 261 Gene3D G3DSA:3.20.20.70 1 259 5.4E-97 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMGD1_RS01795 582977f05aebc274a1d14626c51c3f1f 261 PANTHER PTHR22854:SF2 2 258 1.2E-99 T 22-04-2016 SMGD1_RS01795 582977f05aebc274a1d14626c51c3f1f 261 Hamap MF_00134_A Indole-3-glycerol phosphate synthase [trpC]. 34 256 30.014 T 22-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 SMGD1_RS01795 582977f05aebc274a1d14626c51c3f1f 261 PANTHER PTHR22854 2 258 1.2E-99 T 22-04-2016 SMGD1_RS01795 582977f05aebc274a1d14626c51c3f1f 261 Pfam PF00218 Indole-3-glycerol phosphate synthase 3 258 1.2E-88 T 22-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 SMGD1_RS01795 582977f05aebc274a1d14626c51c3f1f 261 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 54 72 - T 22-04-2016 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 SMGD1_RS08050 f2db1c382217d2057771754e64cc5958 261 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMGD1_RS08050 f2db1c382217d2057771754e64cc5958 261 SMART SM00382 39 249 1.6E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain SMGD1_RS08050 f2db1c382217d2057771754e64cc5958 261 PANTHER PTHR24220 14 258 1.4E-113 T 22-04-2016 SMGD1_RS08050 f2db1c382217d2057771754e64cc5958 261 Gene3D G3DSA:3.40.50.300 12 255 1.8E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS08050 f2db1c382217d2057771754e64cc5958 261 SUPERFAMILY SSF52540 12 254 1.21E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS08050 f2db1c382217d2057771754e64cc5958 261 PANTHER PTHR24220:SF585 14 258 1.4E-113 T 22-04-2016 SMGD1_RS08050 f2db1c382217d2057771754e64cc5958 261 Pfam PF00005 ABC transporter 31 186 3.9E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMGD1_RS08050 f2db1c382217d2057771754e64cc5958 261 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 13 261 2.5E-112 T 22-04-2016 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 SMGD1_RS00330 4d07c392131dcddfaa0e2b8d492be921 393 SUPERFAMILY SSF109604 207 382 5.34E-36 T 22-04-2016 SMGD1_RS00330 4d07c392131dcddfaa0e2b8d492be921 393 Gene3D G3DSA:1.10.3210.10 215 380 2.5E-19 T 22-04-2016 IPR006674 HD domain SMGD1_RS00330 4d07c392131dcddfaa0e2b8d492be921 393 Pfam PF13487 HD domain 270 333 1.1E-14 T 22-04-2016 SMGD1_RS06210 7fb17405dddd70b1142f7078cfff436a 443 PRINTS PR00149 Fumarate lyase superfamily signature 261 277 6.0E-23 T 22-04-2016 IPR000362 Fumarate lyase family SMGD1_RS06210 7fb17405dddd70b1142f7078cfff436a 443 PRINTS PR00149 Fumarate lyase superfamily signature 88 106 6.0E-23 T 22-04-2016 IPR000362 Fumarate lyase family SMGD1_RS06210 7fb17405dddd70b1142f7078cfff436a 443 PRINTS PR00149 Fumarate lyase superfamily signature 133 151 6.0E-23 T 22-04-2016 IPR000362 Fumarate lyase family SMGD1_RS06210 7fb17405dddd70b1142f7078cfff436a 443 PRINTS PR00149 Fumarate lyase superfamily signature 216 243 6.0E-23 T 22-04-2016 IPR000362 Fumarate lyase family SMGD1_RS06210 7fb17405dddd70b1142f7078cfff436a 443 SMART SM00998 349 441 4.8E-37 T 22-04-2016 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 SMGD1_RS06210 7fb17405dddd70b1142f7078cfff436a 443 Gene3D G3DSA:1.10.275.10 3 90 3.4E-30 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal SMGD1_RS06210 7fb17405dddd70b1142f7078cfff436a 443 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 1 441 3.4E-165 T 22-04-2016 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 SMGD1_RS06210 7fb17405dddd70b1142f7078cfff436a 443 ProSitePatterns PS00163 Fumarate lyases signature. 261 270 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 SMGD1_RS06210 7fb17405dddd70b1142f7078cfff436a 443 Pfam PF10397 Adenylosuccinate lyase C-terminus 350 440 4.8E-26 T 22-04-2016 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 SMGD1_RS06210 7fb17405dddd70b1142f7078cfff436a 443 Gene3D G3DSA:1.20.200.10 91 355 1.8E-85 T 22-04-2016 SMGD1_RS06210 7fb17405dddd70b1142f7078cfff436a 443 PRINTS PR00145 Argininosuccinate lyase family signature 87 109 2.2E-9 T 22-04-2016 SMGD1_RS06210 7fb17405dddd70b1142f7078cfff436a 443 PRINTS PR00145 Argininosuccinate lyase family signature 216 240 2.2E-9 T 22-04-2016 SMGD1_RS06210 7fb17405dddd70b1142f7078cfff436a 443 PRINTS PR00145 Argininosuccinate lyase family signature 261 277 2.2E-9 T 22-04-2016 SMGD1_RS06210 7fb17405dddd70b1142f7078cfff436a 443 PRINTS PR00145 Argininosuccinate lyase family signature 128 148 2.2E-9 T 22-04-2016 SMGD1_RS06210 7fb17405dddd70b1142f7078cfff436a 443 PANTHER PTHR11444 1 436 5.3E-140 T 22-04-2016 IPR000362 Fumarate lyase family SMGD1_RS06210 7fb17405dddd70b1142f7078cfff436a 443 SUPERFAMILY SSF48557 3 441 6.75E-125 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 SMGD1_RS06210 7fb17405dddd70b1142f7078cfff436a 443 PANTHER PTHR11444:SF2 1 436 5.3E-140 T 22-04-2016 SMGD1_RS06210 7fb17405dddd70b1142f7078cfff436a 443 Pfam PF00206 Lyase 6 284 1.4E-55 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal SMGD1_RS06210 7fb17405dddd70b1142f7078cfff436a 443 Gene3D G3DSA:1.10.40.30 356 441 7.0E-35 T 22-04-2016 SMGD1_RS11440 428c6302bff80c507b976c30673d604f 172 PANTHER PTHR10516:SF316 1 82 6.8E-20 T 22-04-2016 SMGD1_RS11440 428c6302bff80c507b976c30673d604f 172 PANTHER PTHR10516:SF316 128 172 6.8E-20 T 22-04-2016 SMGD1_RS11440 428c6302bff80c507b976c30673d604f 172 SUPERFAMILY SSF54534 3 139 1.89E-36 T 22-04-2016 SMGD1_RS11440 428c6302bff80c507b976c30673d604f 172 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 4 134 2.7E-12 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 SMGD1_RS11440 428c6302bff80c507b976c30673d604f 172 Gene3D G3DSA:3.10.50.40 3 68 8.4E-19 T 22-04-2016 SMGD1_RS11440 428c6302bff80c507b976c30673d604f 172 Gene3D G3DSA:3.10.50.40 121 138 8.4E-19 T 22-04-2016 SMGD1_RS11440 428c6302bff80c507b976c30673d604f 172 PANTHER PTHR10516 1 82 6.8E-20 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type SMGD1_RS11440 428c6302bff80c507b976c30673d604f 172 PANTHER PTHR10516 128 172 6.8E-20 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type SMGD1_RS12760 7d7775d3c4bba0fce5b0c4ff378a72dc 427 PANTHER PTHR33362 1 423 1.4E-162 T 22-04-2016 SMGD1_RS12760 7d7775d3c4bba0fce5b0c4ff378a72dc 427 PANTHER PTHR33362:SF7 1 423 1.4E-162 T 22-04-2016 SMGD1_RS12760 7d7775d3c4bba0fce5b0c4ff378a72dc 427 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 421 2.3E-87 T 22-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit SMGD1_RS12760 7d7775d3c4bba0fce5b0c4ff378a72dc 427 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 425 9.2E-99 T 22-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 SMGD1_RS12760 7d7775d3c4bba0fce5b0c4ff378a72dc 427 PIRSF PIRSF006066 1 427 9.3E-67 T 22-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 SMGD1_RS14255 97b73676653aaa99a3d6f9e6e78ae20d 297 Pfam PF03747 ADP-ribosylglycohydrolase 5 273 5.8E-20 T 22-04-2016 IPR005502 ADP-ribosylation/Crystallin J1 SMGD1_RS14255 97b73676653aaa99a3d6f9e6e78ae20d 297 SUPERFAMILY SSF101478 20 295 1.03E-11 T 22-04-2016 IPR005502 ADP-ribosylation/Crystallin J1 SMGD1_RS07650 2f87c5ddb9dcbe4833b3ee6b56869f77 130 Pfam PF14697 4Fe-4S dicluster domain 55 102 1.1E-10 T 22-04-2016 SMGD1_RS07650 2f87c5ddb9dcbe4833b3ee6b56869f77 130 TIGRFAM TIGR02179 PorD_KorD: 2-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate family 36 113 5.4E-28 T 22-04-2016 IPR011898 2-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate GO:0016625|GO:0051539 SMGD1_RS07650 2f87c5ddb9dcbe4833b3ee6b56869f77 130 Gene3D G3DSA:3.30.70.20 49 117 1.1E-15 T 22-04-2016 SMGD1_RS07650 2f87c5ddb9dcbe4833b3ee6b56869f77 130 SUPERFAMILY SSF54862 47 103 3.66E-17 T 22-04-2016 SMGD1_RS07650 2f87c5ddb9dcbe4833b3ee6b56869f77 130 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 60 71 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SMGD1_RS07650 2f87c5ddb9dcbe4833b3ee6b56869f77 130 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 90 101 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SMGD1_RS01745 72081da6209645f0dc74c49ab1b7a546 187 Pfam PF03923 Uncharacterized lipoprotein 41 181 2.3E-14 T 22-04-2016 IPR005619 Uncharacterised protein family, YajG SMGD1_RS01440 3974f590d80693653a62b045db816501 390 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 89 289 25.036 T 22-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 SMGD1_RS01440 3974f590d80693653a62b045db816501 390 PANTHER PTHR23417:SF14 14 20 2.4E-37 T 22-04-2016 SMGD1_RS01440 3974f590d80693653a62b045db816501 390 PANTHER PTHR23417:SF14 125 291 2.4E-37 T 22-04-2016 SMGD1_RS01440 3974f590d80693653a62b045db816501 390 Pfam PF02390 Putative methyltransferase 125 283 3.8E-39 T 22-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 SMGD1_RS01440 3974f590d80693653a62b045db816501 390 Gene3D G3DSA:3.40.50.150 123 231 1.7E-9 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS01440 3974f590d80693653a62b045db816501 390 SUPERFAMILY SSF53335 111 287 5.8E-20 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS01440 3974f590d80693653a62b045db816501 390 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 111 281 3.5E-44 T 22-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 SMGD1_RS01440 3974f590d80693653a62b045db816501 390 PANTHER PTHR23417 14 20 2.4E-37 T 22-04-2016 SMGD1_RS01440 3974f590d80693653a62b045db816501 390 PANTHER PTHR23417 125 291 2.4E-37 T 22-04-2016 SMGD1_RS06540 0d4cefeb7b8281c1b4befe10e24588ea 374 Pfam PF13682 Chemoreceptor zinc-binding domain 260 325 2.6E-12 T 22-04-2016 IPR025991 Chemoreceptor zinc-binding domain UniPathway: UPA00599 SMGD1_RS06540 0d4cefeb7b8281c1b4befe10e24588ea 374 Gene3D G3DSA:1.10.287.950 66 247 2.2E-46 T 22-04-2016 SMGD1_RS06540 0d4cefeb7b8281c1b4befe10e24588ea 374 PANTHER PTHR32089 104 241 4.8E-47 T 22-04-2016 SMGD1_RS06540 0d4cefeb7b8281c1b4befe10e24588ea 374 SMART SM00283 45 269 1.1E-23 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SMGD1_RS06540 0d4cefeb7b8281c1b4befe10e24588ea 374 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 109 242 6.5E-35 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SMGD1_RS06540 0d4cefeb7b8281c1b4befe10e24588ea 374 SUPERFAMILY SSF58104 18 250 6.67E-48 T 22-04-2016 SMGD1_RS08175 ebbc921881af6b2734b4d8f2a451674c 255 SUPERFAMILY SSF51735 225 255 5.81E-39 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS08175 ebbc921881af6b2734b4d8f2a451674c 255 SUPERFAMILY SSF51735 1 116 5.81E-39 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS08175 ebbc921881af6b2734b4d8f2a451674c 255 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 118 253 2.2E-39 T 22-04-2016 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SMGD1_RS08175 ebbc921881af6b2734b4d8f2a451674c 255 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 2 254 32.209 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SMGD1_RS08175 ebbc921881af6b2734b4d8f2a451674c 255 PIRSF PIRSF000161 1 255 6.5E-85 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SMGD1_RS08175 ebbc921881af6b2734b4d8f2a451674c 255 Gene3D G3DSA:3.30.360.10 124 223 7.1E-36 T 22-04-2016 SMGD1_RS08175 ebbc921881af6b2734b4d8f2a451674c 255 Gene3D G3DSA:3.40.50.720 3 123 8.9E-14 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS08175 ebbc921881af6b2734b4d8f2a451674c 255 SUPERFAMILY SSF55347 117 225 8.07E-34 T 22-04-2016 SMGD1_RS08175 ebbc921881af6b2734b4d8f2a451674c 255 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 139 156 - T 22-04-2016 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SMGD1_RS08175 ebbc921881af6b2734b4d8f2a451674c 255 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 1 254 6.5E-78 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SMGD1_RS08175 ebbc921881af6b2734b4d8f2a451674c 255 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 2 115 1.1E-28 T 22-04-2016 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SMGD1_RS08175 ebbc921881af6b2734b4d8f2a451674c 255 PANTHER PTHR20836 1 255 4.4E-68 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SMGD1_RS09075 cf1f0dfcf10808a3abb12f2aae263416 621 Gene3D G3DSA:3.20.20.450 366 616 7.6E-81 T 22-04-2016 IPR001633 EAL domain SMGD1_RS09075 cf1f0dfcf10808a3abb12f2aae263416 621 Pfam PF00990 Diguanylate cyclase, GGDEF domain 187 348 5.2E-44 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS09075 cf1f0dfcf10808a3abb12f2aae263416 621 PANTHER PTHR33121:SF13 280 619 6.7E-68 T 22-04-2016 SMGD1_RS09075 cf1f0dfcf10808a3abb12f2aae263416 621 Pfam PF00563 EAL domain 374 605 5.1E-63 T 22-04-2016 IPR001633 EAL domain SMGD1_RS09075 cf1f0dfcf10808a3abb12f2aae263416 621 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 185 352 1.6E-39 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS09075 cf1f0dfcf10808a3abb12f2aae263416 621 SMART SM00267 170 353 6.2E-53 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS09075 cf1f0dfcf10808a3abb12f2aae263416 621 PANTHER PTHR33121 280 619 6.7E-68 T 22-04-2016 SMGD1_RS09075 cf1f0dfcf10808a3abb12f2aae263416 621 Gene3D G3DSA:3.30.70.270 188 358 1.5E-48 T 22-04-2016 SMGD1_RS09075 cf1f0dfcf10808a3abb12f2aae263416 621 SUPERFAMILY SSF141868 369 615 1.05E-77 T 22-04-2016 IPR001633 EAL domain SMGD1_RS09075 cf1f0dfcf10808a3abb12f2aae263416 621 SMART SM00052 363 610 1.1E-91 T 22-04-2016 IPR001633 EAL domain SMGD1_RS09075 cf1f0dfcf10808a3abb12f2aae263416 621 SUPERFAMILY SSF55073 192 355 1.22E-43 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS06225 452f8277052f0dc3119af65eb4b0bcbc 128 Hamap MF_01185 Flagellar assembly factor FliW [fliW]. 2 122 18.235 T 22-04-2016 IPR003775 Flagellar assembly factor FliW GO:0044780 SMGD1_RS06225 452f8277052f0dc3119af65eb4b0bcbc 128 Gene3D G3DSA:2.30.290.10 4 115 2.6E-31 T 22-04-2016 IPR024046 Flagellar assembly factor FliW domain SMGD1_RS06225 452f8277052f0dc3119af65eb4b0bcbc 128 Pfam PF02623 FliW protein 6 114 6.1E-27 T 22-04-2016 IPR003775 Flagellar assembly factor FliW GO:0044780 SMGD1_RS06225 452f8277052f0dc3119af65eb4b0bcbc 128 SUPERFAMILY SSF141457 5 115 9.42E-29 T 22-04-2016 IPR024046 Flagellar assembly factor FliW domain SMGD1_RS05160 75fa1627dd7ce1f010be6132b3c19935 323 SUPERFAMILY SSF53955 7 314 8.81E-29 T 22-04-2016 IPR023346 Lysozyme-like domain SMGD1_RS05160 75fa1627dd7ce1f010be6132b3c19935 323 Gene3D G3DSA:1.10.530.10 93 128 1.8E-11 T 22-04-2016 SMGD1_RS05160 75fa1627dd7ce1f010be6132b3c19935 323 Gene3D G3DSA:1.10.530.10 216 314 1.8E-11 T 22-04-2016 SMGD1_RS05160 75fa1627dd7ce1f010be6132b3c19935 323 Pfam PF13406 Transglycosylase SLT domain 30 314 1.1E-38 T 22-04-2016 IPR031304 Transglycosylase SLT domain 2 SMGD1_RS08470 1a7e3f751429bd09ac1f0c61338bc6de 502 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 12 490 15.886 T 22-04-2016 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 SMGD1_RS08470 1a7e3f751429bd09ac1f0c61338bc6de 502 PANTHER PTHR22773:SF41 6 494 2.9E-117 T 22-04-2016 SMGD1_RS08470 1a7e3f751429bd09ac1f0c61338bc6de 502 Pfam PF00361 Proton-conducting membrane transporter 136 433 7.9E-61 T 22-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 SMGD1_RS08470 1a7e3f751429bd09ac1f0c61338bc6de 502 PANTHER PTHR22773 6 494 2.9E-117 T 22-04-2016 SMGD1_RS08470 1a7e3f751429bd09ac1f0c61338bc6de 502 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 15 484 7.3E-116 T 22-04-2016 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 SMGD1_RS07075 30c01e2f0f9bc57c0aa0a002284b858f 217 Gene3D G3DSA:1.10.760.10 111 196 1.5E-8 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS07075 30c01e2f0f9bc57c0aa0a002284b858f 217 SUPERFAMILY SSF46626 108 198 4.03E-12 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS07075 30c01e2f0f9bc57c0aa0a002284b858f 217 Pfam PF00034 Cytochrome c 110 195 3.2E-7 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS03990 b868009d04c3e6bd3630f2b0279051e9 421 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 326 418 3.4E-17 T 22-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SMGD1_RS03990 b868009d04c3e6bd3630f2b0279051e9 421 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 420 9.5E-144 T 22-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SMGD1_RS03990 b868009d04c3e6bd3630f2b0279051e9 421 SUPERFAMILY SSF51246 324 421 2.12E-21 T 22-04-2016 IPR011054 Rudiment single hybrid motif SMGD1_RS03990 b868009d04c3e6bd3630f2b0279051e9 421 SMART SM01210 325 421 3.4E-30 T 22-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SMGD1_RS03990 b868009d04c3e6bd3630f2b0279051e9 421 Gene3D G3DSA:3.30.470.20 187 323 5.0E-54 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SMGD1_RS03990 b868009d04c3e6bd3630f2b0279051e9 421 SMART SM01209 99 291 6.6E-121 T 22-04-2016 SMGD1_RS03990 b868009d04c3e6bd3630f2b0279051e9 421 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 99 291 4.2E-74 T 22-04-2016 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SMGD1_RS03990 b868009d04c3e6bd3630f2b0279051e9 421 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 98 9.5E-30 T 22-04-2016 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SMGD1_RS03990 b868009d04c3e6bd3630f2b0279051e9 421 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 285 292 - T 22-04-2016 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SMGD1_RS03990 b868009d04c3e6bd3630f2b0279051e9 421 Gene3D G3DSA:3.90.600.10 325 420 1.6E-21 T 22-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SMGD1_RS03990 b868009d04c3e6bd3630f2b0279051e9 421 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 421 38.541 T 22-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SMGD1_RS03990 b868009d04c3e6bd3630f2b0279051e9 421 PANTHER PTHR10520 1 421 1.3E-186 T 22-04-2016 SMGD1_RS03990 b868009d04c3e6bd3630f2b0279051e9 421 SUPERFAMILY SSF52440 1 99 5.18E-30 T 22-04-2016 IPR016185 Pre-ATP-grasp domain SMGD1_RS03990 b868009d04c3e6bd3630f2b0279051e9 421 Gene3D G3DSA:3.30.1490.20 118 186 1.6E-24 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SMGD1_RS03990 b868009d04c3e6bd3630f2b0279051e9 421 SUPERFAMILY SSF56059 100 318 7.78E-59 T 22-04-2016 SMGD1_RS03990 b868009d04c3e6bd3630f2b0279051e9 421 Gene3D G3DSA:3.40.50.20 2 91 6.5E-29 T 22-04-2016 IPR016185 Pre-ATP-grasp domain SMGD1_RS11940 7c5bf3c2fe0f541fd74f2f1b6d26745c 408 SUPERFAMILY SSF101478 110 404 7.85E-18 T 22-04-2016 IPR005502 ADP-ribosylation/Crystallin J1 SMGD1_RS11940 7c5bf3c2fe0f541fd74f2f1b6d26745c 408 PANTHER PTHR16222 7 55 3.2E-19 T 22-04-2016 SMGD1_RS11940 7c5bf3c2fe0f541fd74f2f1b6d26745c 408 PANTHER PTHR16222 122 404 3.2E-19 T 22-04-2016 SMGD1_RS11940 7c5bf3c2fe0f541fd74f2f1b6d26745c 408 PANTHER PTHR16222:SF15 7 55 3.2E-19 T 22-04-2016 SMGD1_RS11940 7c5bf3c2fe0f541fd74f2f1b6d26745c 408 PANTHER PTHR16222:SF15 122 404 3.2E-19 T 22-04-2016 SMGD1_RS11940 7c5bf3c2fe0f541fd74f2f1b6d26745c 408 Pfam PF03747 ADP-ribosylglycohydrolase 10 383 2.1E-35 T 22-04-2016 IPR005502 ADP-ribosylation/Crystallin J1 SMGD1_RS02210 44e887994034de8eddd9948cd21c9f7b 360 Pfam PF02677 Uncharacterized BCR, COG1636 1 175 1.1E-57 T 22-04-2016 IPR003828 Protein of unknown function DUF208 SMGD1_RS02210 44e887994034de8eddd9948cd21c9f7b 360 PANTHER PTHR36701 1 224 1.2E-65 T 22-04-2016 SMGD1_RS01700 494c75807651cff6a5e6f6385c5da8f9 263 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 10 236 1.7E-17 T 22-04-2016 SMGD1_RS12750 050bbaee41b2d5b520440d100afa7592 481 PANTHER PTHR23135:SF3 159 473 9.7E-40 T 22-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SMGD1_RS12750 050bbaee41b2d5b520440d100afa7592 481 Gene3D G3DSA:3.40.1190.10 154 356 9.6E-34 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SMGD1_RS12750 050bbaee41b2d5b520440d100afa7592 481 Pfam PF08245 Mur ligase middle domain 165 339 4.1E-23 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SMGD1_RS12750 050bbaee41b2d5b520440d100afa7592 481 PANTHER PTHR23135 159 473 9.7E-40 T 22-04-2016 SMGD1_RS12750 050bbaee41b2d5b520440d100afa7592 481 SUPERFAMILY SSF53623 160 357 1.14E-30 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SMGD1_RS12750 050bbaee41b2d5b520440d100afa7592 481 SUPERFAMILY SSF53244 359 473 4.03E-17 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SMGD1_RS12750 050bbaee41b2d5b520440d100afa7592 481 Gene3D G3DSA:3.90.190.20 358 473 7.0E-9 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SMGD1_RS08180 cd9e0c06da57103157333f3318640bb8 312 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 2.1E-29 T 22-04-2016 SMGD1_RS08180 cd9e0c06da57103157333f3318640bb8 312 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 145 163 2.1E-29 T 22-04-2016 SMGD1_RS08180 cd9e0c06da57103157333f3318640bb8 312 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 260 282 2.1E-29 T 22-04-2016 SMGD1_RS08180 cd9e0c06da57103157333f3318640bb8 312 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 103 121 2.1E-29 T 22-04-2016 SMGD1_RS08180 cd9e0c06da57103157333f3318640bb8 312 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 229 245 2.1E-29 T 22-04-2016 SMGD1_RS08180 cd9e0c06da57103157333f3318640bb8 312 Gene3D G3DSA:3.50.50.60 118 237 5.0E-33 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS08180 cd9e0c06da57103157333f3318640bb8 312 SUPERFAMILY SSF51905 3 305 1.65E-49 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS08180 cd9e0c06da57103157333f3318640bb8 312 Gene3D G3DSA:3.50.50.60 3 117 2.0E-26 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS08180 cd9e0c06da57103157333f3318640bb8 312 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 296 3.1E-43 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS08180 cd9e0c06da57103157333f3318640bb8 312 PANTHER PTHR22912 1 310 5.4E-108 T 22-04-2016 SMGD1_RS08180 cd9e0c06da57103157333f3318640bb8 312 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 133 153 - T 22-04-2016 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 SMGD1_RS08180 cd9e0c06da57103157333f3318640bb8 312 Gene3D G3DSA:3.50.50.60 254 309 1.6E-8 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS08180 cd9e0c06da57103157333f3318640bb8 312 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 3 307 2.2E-104 T 22-04-2016 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00240+1.8.1.9|KEGG: 00450+1.8.1.9 SMGD1_RS08180 cd9e0c06da57103157333f3318640bb8 312 PANTHER PTHR22912:SF48 1 310 5.4E-108 T 22-04-2016 SMGD1_RS08180 cd9e0c06da57103157333f3318640bb8 312 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 104 112 6.1E-57 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SMGD1_RS08180 cd9e0c06da57103157333f3318640bb8 312 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 58 68 6.1E-57 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SMGD1_RS08180 cd9e0c06da57103157333f3318640bb8 312 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 126 138 6.1E-57 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SMGD1_RS08180 cd9e0c06da57103157333f3318640bb8 312 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 3 25 6.1E-57 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SMGD1_RS08180 cd9e0c06da57103157333f3318640bb8 312 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 37 52 6.1E-57 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SMGD1_RS08180 cd9e0c06da57103157333f3318640bb8 312 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 141 165 6.1E-57 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SMGD1_RS08180 cd9e0c06da57103157333f3318640bb8 312 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 288 307 6.1E-57 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SMGD1_RS08180 cd9e0c06da57103157333f3318640bb8 312 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 193 209 6.1E-57 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SMGD1_RS04210 5b6f55ec05de1549b2f7a7769a13a092 377 Gene3D G3DSA:1.10.150.130 113 176 2.3E-4 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal SMGD1_RS04210 5b6f55ec05de1549b2f7a7769a13a092 377 Gene3D G3DSA:1.10.443.10 197 366 3.3E-15 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 SMGD1_RS04210 5b6f55ec05de1549b2f7a7769a13a092 377 PANTHER PTHR30629 104 376 3.9E-13 T 22-04-2016 SMGD1_RS04210 5b6f55ec05de1549b2f7a7769a13a092 377 Pfam PF00589 Phage integrase family 196 358 1.1E-7 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 SMGD1_RS04210 5b6f55ec05de1549b2f7a7769a13a092 377 SUPERFAMILY SSF56349 102 367 4.12E-29 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 SMGD1_RS03850 34ec98fe065291cb871cafe895b35017 244 PANTHER PTHR11079:SF73 14 237 5.5E-34 T 22-04-2016 SMGD1_RS03850 34ec98fe065291cb871cafe895b35017 244 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 91 105 - T 22-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMGD1_RS03850 34ec98fe065291cb871cafe895b35017 244 SUPERFAMILY SSF55120 56 242 1.23E-45 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMGD1_RS03850 34ec98fe065291cb871cafe895b35017 244 Pfam PF00849 RNA pseudouridylate synthase 78 197 6.1E-20 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMGD1_RS03850 34ec98fe065291cb871cafe895b35017 244 PANTHER PTHR11079 14 237 5.5E-34 T 22-04-2016 SMGD1_RS14125 15bf8a94b487eb313daf035ec3177a54 372 Pfam PF00149 Calcineurin-like phosphoesterase 1 201 1.4E-14 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 SMGD1_RS14125 15bf8a94b487eb313daf035ec3177a54 372 Gene3D G3DSA:3.60.21.10 2 250 7.6E-40 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SMGD1_RS14125 15bf8a94b487eb313daf035ec3177a54 372 SUPERFAMILY SSF56300 2 293 3.94E-42 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SMGD1_RS14125 15bf8a94b487eb313daf035ec3177a54 372 PANTHER PTHR30337 1 372 1.7E-28 T 22-04-2016 SMGD1_RS14125 15bf8a94b487eb313daf035ec3177a54 372 PANTHER PTHR30337:SF0 1 372 1.7E-28 T 22-04-2016 SMGD1_RS00340 1b92593399d8ae7f838c4e4dd1e84d4d 438 PANTHER PTHR33121 192 434 2.3E-52 T 22-04-2016 SMGD1_RS00340 1b92593399d8ae7f838c4e4dd1e84d4d 438 SMART SM00052 200 438 1.2E-45 T 22-04-2016 IPR001633 EAL domain SMGD1_RS00340 1b92593399d8ae7f838c4e4dd1e84d4d 438 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 54 185 1.3E-12 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS00340 1b92593399d8ae7f838c4e4dd1e84d4d 438 SUPERFAMILY SSF55073 45 188 4.32E-16 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS00340 1b92593399d8ae7f838c4e4dd1e84d4d 438 PANTHER PTHR33121:SF10 192 434 2.3E-52 T 22-04-2016 SMGD1_RS00340 1b92593399d8ae7f838c4e4dd1e84d4d 438 Pfam PF00563 EAL domain 206 434 2.2E-59 T 22-04-2016 IPR001633 EAL domain SMGD1_RS00340 1b92593399d8ae7f838c4e4dd1e84d4d 438 SUPERFAMILY SSF141868 207 434 8.89E-61 T 22-04-2016 IPR001633 EAL domain SMGD1_RS00340 1b92593399d8ae7f838c4e4dd1e84d4d 438 Gene3D G3DSA:3.30.70.270 42 193 2.3E-17 T 22-04-2016 SMGD1_RS00340 1b92593399d8ae7f838c4e4dd1e84d4d 438 Gene3D G3DSA:3.20.20.450 203 434 2.1E-62 T 22-04-2016 IPR001633 EAL domain SMGD1_RS00340 1b92593399d8ae7f838c4e4dd1e84d4d 438 Pfam PF00990 Diguanylate cyclase, GGDEF domain 42 184 1.2E-13 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS00340 1b92593399d8ae7f838c4e4dd1e84d4d 438 SMART SM00267 29 189 2.1E-7 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS13080 8e338a8dcc9f21d818f49e9849f1b322 328 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 1 324 30.925 T 22-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 SMGD1_RS13080 8e338a8dcc9f21d818f49e9849f1b322 328 Gene3D G3DSA:3.40.1030.10 175 327 1.4E-81 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 SMGD1_RS13080 8e338a8dcc9f21d818f49e9849f1b322 328 Gene3D G3DSA:3.40.1030.10 64 140 1.4E-81 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 SMGD1_RS13080 8e338a8dcc9f21d818f49e9849f1b322 328 Gene3D G3DSA:1.20.970.10 141 174 1.3E-26 T 22-04-2016 SMGD1_RS13080 8e338a8dcc9f21d818f49e9849f1b322 328 Gene3D G3DSA:1.20.970.10 1 51 1.3E-26 T 22-04-2016 SMGD1_RS13080 8e338a8dcc9f21d818f49e9849f1b322 328 Pfam PF00591 Glycosyl transferase family, a/b domain 64 314 9.1E-83 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 SMGD1_RS13080 8e338a8dcc9f21d818f49e9849f1b322 328 PANTHER PTHR11922 53 327 6.2E-103 T 22-04-2016 SMGD1_RS13080 8e338a8dcc9f21d818f49e9849f1b322 328 PANTHER PTHR11922 22 33 6.2E-103 T 22-04-2016 SMGD1_RS13080 8e338a8dcc9f21d818f49e9849f1b322 328 PANTHER PTHR11922:SF5 53 327 6.2E-103 T 22-04-2016 SMGD1_RS13080 8e338a8dcc9f21d818f49e9849f1b322 328 PANTHER PTHR11922:SF5 22 33 6.2E-103 T 22-04-2016 SMGD1_RS13080 8e338a8dcc9f21d818f49e9849f1b322 328 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 1 323 5.4E-102 T 22-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 SMGD1_RS13080 8e338a8dcc9f21d818f49e9849f1b322 328 SUPERFAMILY SSF52418 63 323 1.18E-85 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 SMGD1_RS05440 0ed703c97ef4911300caae7fccf51cd6 348 Pfam PF03773 Predicted permease 17 295 7.3E-43 T 22-04-2016 IPR005524 Predicted permease DUF318 SMGD1_RS05440 0ed703c97ef4911300caae7fccf51cd6 348 PANTHER PTHR34184 3 338 2.4E-62 T 22-04-2016 SMGD1_RS05440 0ed703c97ef4911300caae7fccf51cd6 348 PANTHER PTHR34184:SF4 3 338 2.4E-62 T 22-04-2016 SMGD1_RS01410 3d4ff51dcdfdbebe4f1d774f76bb5ef1 252 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 4 252 3.9E-67 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 SMGD1_RS01410 3d4ff51dcdfdbebe4f1d774f76bb5ef1 252 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 2 252 22.802 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 SMGD1_RS01410 3d4ff51dcdfdbebe4f1d774f76bb5ef1 252 SUPERFAMILY SSF51735 2 146 2.1E-21 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS01410 3d4ff51dcdfdbebe4f1d774f76bb5ef1 252 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 3 89 2.0E-10 T 22-04-2016 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal SMGD1_RS01410 3d4ff51dcdfdbebe4f1d774f76bb5ef1 252 SUPERFAMILY SSF48179 149 252 1.56E-28 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SMGD1_RS01410 3d4ff51dcdfdbebe4f1d774f76bb5ef1 252 PANTHER PTHR11645 3 252 2.0E-73 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 SMGD1_RS01410 3d4ff51dcdfdbebe4f1d774f76bb5ef1 252 PIRSF PIRSF000193 1 252 9.2E-59 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 SMGD1_RS01410 3d4ff51dcdfdbebe4f1d774f76bb5ef1 252 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 150 252 1.7E-32 T 22-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 SMGD1_RS01410 3d4ff51dcdfdbebe4f1d774f76bb5ef1 252 Gene3D G3DSA:1.10.3730.10 149 252 1.1E-31 T 22-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 SMGD1_RS01410 3d4ff51dcdfdbebe4f1d774f76bb5ef1 252 Gene3D G3DSA:3.40.50.720 3 144 8.9E-25 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS00545 2967e64a285273d49bb1cf087417b8f1 325 PANTHER PTHR10256 17 324 8.6E-89 T 22-04-2016 SMGD1_RS00545 2967e64a285273d49bb1cf087417b8f1 325 PIRSF PIRSF036407 1 325 2.3E-105 T 22-04-2016 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 SMGD1_RS00545 2967e64a285273d49bb1cf087417b8f1 325 Pfam PF02769 AIR synthase related protein, C-terminal domain 147 319 4.7E-22 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SMGD1_RS00545 2967e64a285273d49bb1cf087417b8f1 325 Gene3D G3DSA:3.30.1330.10 17 141 1.4E-21 T 22-04-2016 IPR016188 PurM-like, N-terminal domain SMGD1_RS00545 2967e64a285273d49bb1cf087417b8f1 325 TIGRFAM TIGR00476 selD: selenide, water dikinase 2 292 1.1E-100 T 22-04-2016 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 SMGD1_RS00545 2967e64a285273d49bb1cf087417b8f1 325 SUPERFAMILY SSF55326 13 140 3.27E-33 T 22-04-2016 SMGD1_RS00545 2967e64a285273d49bb1cf087417b8f1 325 Pfam PF00586 AIR synthase related protein, N-terminal domain 29 134 4.8E-15 T 22-04-2016 IPR016188 PurM-like, N-terminal domain SMGD1_RS00545 2967e64a285273d49bb1cf087417b8f1 325 SUPERFAMILY SSF56042 141 322 3.56E-43 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SMGD1_RS00545 2967e64a285273d49bb1cf087417b8f1 325 Gene3D G3DSA:3.90.650.10 153 323 1.7E-14 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SMGD1_RS05245 190bc5a96cd5edcfdc484c0631296619 231 Pfam PF02348 Cytidylyltransferase 7 195 2.1E-27 T 22-04-2016 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 SMGD1_RS05245 190bc5a96cd5edcfdc484c0631296619 231 SUPERFAMILY SSF53448 4 227 3.67E-59 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMGD1_RS05245 190bc5a96cd5edcfdc484c0631296619 231 Gene3D G3DSA:3.90.550.10 3 228 8.4E-69 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMGD1_RS05245 190bc5a96cd5edcfdc484c0631296619 231 PANTHER PTHR21485 1 216 1.6E-52 T 22-04-2016 SMGD1_RS08810 7ad3ec5afc1db1787edbd2298812fa68 720 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 3 123 9.5E-32 T 22-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 SMGD1_RS08810 7ad3ec5afc1db1787edbd2298812fa68 720 Pfam PF01814 Hemerythrin HHE cation binding domain 11 121 4.3E-8 T 22-04-2016 IPR012312 Haemerythrin-like SMGD1_RS08810 7ad3ec5afc1db1787edbd2298812fa68 720 Pfam PF08376 Nitrate and nitrite sensing 205 440 1.9E-34 T 22-04-2016 IPR013587 Nitrate/nitrite sensing protein SMGD1_RS08810 7ad3ec5afc1db1787edbd2298812fa68 720 PANTHER PTHR10799:SF750 592 714 3.2E-27 T 22-04-2016 SMGD1_RS08810 7ad3ec5afc1db1787edbd2298812fa68 720 PANTHER PTHR10799:SF750 100 166 3.2E-27 T 22-04-2016 SMGD1_RS08810 7ad3ec5afc1db1787edbd2298812fa68 720 Pfam PF00990 Diguanylate cyclase, GGDEF domain 559 714 8.2E-45 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS08810 7ad3ec5afc1db1787edbd2298812fa68 720 SUPERFAMILY SSF47188 1 123 1.96E-27 T 22-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 SMGD1_RS08810 7ad3ec5afc1db1787edbd2298812fa68 720 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 555 718 7.3E-53 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS08810 7ad3ec5afc1db1787edbd2298812fa68 720 SMART SM00267 548 719 3.4E-57 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS08810 7ad3ec5afc1db1787edbd2298812fa68 720 SUPERFAMILY SSF55073 564 719 3.22E-49 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS08810 7ad3ec5afc1db1787edbd2298812fa68 720 PANTHER PTHR10799 592 714 3.2E-27 T 22-04-2016 SMGD1_RS08810 7ad3ec5afc1db1787edbd2298812fa68 720 PANTHER PTHR10799 100 166 3.2E-27 T 22-04-2016 SMGD1_RS08810 7ad3ec5afc1db1787edbd2298812fa68 720 Gene3D G3DSA:3.30.70.270 561 719 7.7E-54 T 22-04-2016 SMGD1_RS08810 7ad3ec5afc1db1787edbd2298812fa68 720 Gene3D G3DSA:1.20.120.50 1 122 1.9E-29 T 22-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 SMGD1_RS01065 607a01e9c1d8667f6e7da2c871dca8a8 409 Gene3D G3DSA:3.40.50.2300 12 128 3.2E-28 T 22-04-2016 SMGD1_RS01065 607a01e9c1d8667f6e7da2c871dca8a8 409 SUPERFAMILY SSF55073 263 366 4.24E-5 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS01065 607a01e9c1d8667f6e7da2c871dca8a8 409 Gene3D G3DSA:3.30.450.20 135 251 9.4E-4 T 22-04-2016 SMGD1_RS01065 607a01e9c1d8667f6e7da2c871dca8a8 409 SUPERFAMILY SSF52172 12 127 8.11E-29 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS01065 607a01e9c1d8667f6e7da2c871dca8a8 409 SMART SM00448 13 124 1.4E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS01065 607a01e9c1d8667f6e7da2c871dca8a8 409 PANTHER PTHR26402 13 127 2.7E-23 T 22-04-2016 SMGD1_RS01065 607a01e9c1d8667f6e7da2c871dca8a8 409 Pfam PF00072 Response regulator receiver domain 16 121 6.9E-21 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS06050 bc1de34a6cc654fb566052be4515e59c 333 SUPERFAMILY SSF103247 207 325 1.44E-10 T 22-04-2016 IPR005180 Domain of unknown function DUF302 SMGD1_RS06050 bc1de34a6cc654fb566052be4515e59c 333 Gene3D G3DSA:3.30.310.70 207 325 3.3E-6 T 22-04-2016 IPR005180 Domain of unknown function DUF302 SMGD1_RS06050 bc1de34a6cc654fb566052be4515e59c 333 Gene3D G3DSA:3.30.310.70 100 169 2.0E-4 T 22-04-2016 IPR005180 Domain of unknown function DUF302 SMGD1_RS06050 bc1de34a6cc654fb566052be4515e59c 333 SUPERFAMILY SSF103247 77 168 3.27E-8 T 22-04-2016 IPR005180 Domain of unknown function DUF302 SMGD1_RS11280 1ac693d7be140609d8b035a07765d705 96 PANTHER PTHR35177 1 94 8.9E-25 T 22-04-2016 SMGD1_RS11280 1ac693d7be140609d8b035a07765d705 96 Pfam PF01455 HupF/HypC family 1 67 3.7E-23 T 22-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC SMGD1_RS11280 1ac693d7be140609d8b035a07765d705 96 SUPERFAMILY SSF159127 1 84 2.75E-24 T 22-04-2016 SMGD1_RS11280 1ac693d7be140609d8b035a07765d705 96 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 19 35 2.8E-10 T 22-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC SMGD1_RS11280 1ac693d7be140609d8b035a07765d705 96 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 42 58 2.8E-10 T 22-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC SMGD1_RS11280 1ac693d7be140609d8b035a07765d705 96 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 2 9 2.8E-10 T 22-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC SMGD1_RS11280 1ac693d7be140609d8b035a07765d705 96 PANTHER PTHR35177:SF2 1 94 8.9E-25 T 22-04-2016 SMGD1_RS11280 1ac693d7be140609d8b035a07765d705 96 TIGRFAM TIGR00074 hypC_hupF: hydrogenase assembly chaperone HypC/HupF 1 81 1.9E-23 T 22-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC SMGD1_RS05165 d5465c38e16b90c4e688981fed2e4505 267 SUPERFAMILY SSF74650 3 266 1.19E-62 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 SMGD1_RS05165 d5465c38e16b90c4e688981fed2e4505 267 PANTHER PTHR11122 1 266 2.4E-81 T 22-04-2016 SMGD1_RS05165 d5465c38e16b90c4e688981fed2e4505 267 Pfam PF01263 Aldose 1-epimerase 4 264 8.1E-47 T 22-04-2016 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 SMGD1_RS05165 d5465c38e16b90c4e688981fed2e4505 267 PIRSF PIRSF016020 1 267 5.1E-65 T 22-04-2016 IPR025532 Glucose-6-phosphate 1-epimerase KEGG: 00010+5.1.3.15 SMGD1_RS05165 d5465c38e16b90c4e688981fed2e4505 267 Gene3D G3DSA:2.70.98.10 3 266 1.6E-84 T 22-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 SMGD1_RS06125 6f055a8a3ab1a36690247e2044d00e36 540 SUPERFAMILY SSF51735 402 534 9.67E-22 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS06125 6f055a8a3ab1a36690247e2044d00e36 540 Pfam PF00999 Sodium/hydrogen exchanger family 11 376 3.5E-54 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 SMGD1_RS06125 6f055a8a3ab1a36690247e2044d00e36 540 Gene3D G3DSA:3.40.50.720 401 532 1.7E-23 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS06125 6f055a8a3ab1a36690247e2044d00e36 540 Pfam PF02254 TrkA-N domain 405 518 7.8E-16 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 SMGD1_RS06125 6f055a8a3ab1a36690247e2044d00e36 540 PANTHER PTHR16254 1 533 3.0E-114 T 22-04-2016 SMGD1_RS04730 c50feeb52004d9b9cd1d12f2a7c6a442 246 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 136 243 3.5E-10 T 22-04-2016 IPR003709 Peptidase M15B GO:0006508|GO:0008233 SMGD1_RS04730 c50feeb52004d9b9cd1d12f2a7c6a442 246 SUPERFAMILY SSF55166 118 244 1.33E-6 T 22-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain SMGD1_RS01225 056f69505a7c8b9c21e79b0639b1ad86 79 SMART SM00530 16 74 8.4E-5 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SMGD1_RS01225 056f69505a7c8b9c21e79b0639b1ad86 79 SUPERFAMILY SSF47413 12 75 7.68E-10 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SMGD1_RS01225 056f69505a7c8b9c21e79b0639b1ad86 79 Gene3D G3DSA:1.10.260.40 14 76 3.6E-11 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SMGD1_RS01225 056f69505a7c8b9c21e79b0639b1ad86 79 Pfam PF01381 Helix-turn-helix 18 71 9.2E-7 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SMGD1_RS06215 4e98c1a10a8b611fa98236a9c0572936 788 Gene3D G3DSA:3.20.70.20 494 594 6.6E-74 T 22-04-2016 SMGD1_RS06215 4e98c1a10a8b611fa98236a9c0572936 788 Gene3D G3DSA:3.20.70.20 386 432 6.6E-74 T 22-04-2016 SMGD1_RS06215 4e98c1a10a8b611fa98236a9c0572936 788 Gene3D G3DSA:3.20.70.20 124 335 6.6E-74 T 22-04-2016 SMGD1_RS06215 4e98c1a10a8b611fa98236a9c0572936 788 Gene3D G3DSA:3.20.70.20 649 770 6.6E-74 T 22-04-2016 SMGD1_RS06215 4e98c1a10a8b611fa98236a9c0572936 788 Pfam PF02867 Ribonucleotide reductase, barrel domain 214 765 2.1E-166 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SMGD1_RS06215 4e98c1a10a8b611fa98236a9c0572936 788 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 136 209 2.2E-24 T 22-04-2016 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 SMGD1_RS06215 4e98c1a10a8b611fa98236a9c0572936 788 SUPERFAMILY SSF51998 491 770 2.98E-179 T 22-04-2016 SMGD1_RS06215 4e98c1a10a8b611fa98236a9c0572936 788 SUPERFAMILY SSF51998 213 446 2.98E-179 T 22-04-2016 SMGD1_RS06215 4e98c1a10a8b611fa98236a9c0572936 788 SUPERFAMILY SSF48168 7 212 5.49E-68 T 22-04-2016 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 SMGD1_RS06215 4e98c1a10a8b611fa98236a9c0572936 788 PANTHER PTHR11573:SF6 493 770 1.2E-279 T 22-04-2016 SMGD1_RS06215 4e98c1a10a8b611fa98236a9c0572936 788 PANTHER PTHR11573:SF6 4 436 1.2E-279 T 22-04-2016 SMGD1_RS06215 4e98c1a10a8b611fa98236a9c0572936 788 PRINTS PR01183 Ribonucleotide reductase large chain signature 546 568 3.7E-41 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SMGD1_RS06215 4e98c1a10a8b611fa98236a9c0572936 788 PRINTS PR01183 Ribonucleotide reductase large chain signature 574 597 3.7E-41 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SMGD1_RS06215 4e98c1a10a8b611fa98236a9c0572936 788 PRINTS PR01183 Ribonucleotide reductase large chain signature 420 431 3.7E-41 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SMGD1_RS06215 4e98c1a10a8b611fa98236a9c0572936 788 PRINTS PR01183 Ribonucleotide reductase large chain signature 508 531 3.7E-41 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SMGD1_RS06215 4e98c1a10a8b611fa98236a9c0572936 788 PRINTS PR01183 Ribonucleotide reductase large chain signature 649 676 3.7E-41 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SMGD1_RS06215 4e98c1a10a8b611fa98236a9c0572936 788 PRINTS PR01183 Ribonucleotide reductase large chain signature 289 308 3.7E-41 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SMGD1_RS06215 4e98c1a10a8b611fa98236a9c0572936 788 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 139 769 1.7E-194 T 22-04-2016 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 SMGD1_RS06215 4e98c1a10a8b611fa98236a9c0572936 788 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 638 660 - T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SMGD1_RS06215 4e98c1a10a8b611fa98236a9c0572936 788 PANTHER PTHR11573 493 770 1.2E-279 T 22-04-2016 SMGD1_RS06215 4e98c1a10a8b611fa98236a9c0572936 788 PANTHER PTHR11573 4 436 1.2E-279 T 22-04-2016 SMGD1_RS06215 4e98c1a10a8b611fa98236a9c0572936 788 Pfam PF03477 ATP cone domain 2 88 2.5E-15 T 22-04-2016 IPR005144 ATP-cone domain SMGD1_RS12305 a42d40d781fc551b6dee7410ea34ac6f 568 SUPERFAMILY SSF56014 359 467 3.4E-12 T 22-04-2016 SMGD1_RS12305 a42d40d781fc551b6dee7410ea34ac6f 568 PANTHER PTHR32439 4 501 4.6E-66 T 22-04-2016 SMGD1_RS12305 a42d40d781fc551b6dee7410ea34ac6f 568 Gene3D G3DSA:3.90.480.10 56 122 2.8E-19 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 SMGD1_RS12305 a42d40d781fc551b6dee7410ea34ac6f 568 Gene3D G3DSA:3.90.480.10 286 348 2.8E-19 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 SMGD1_RS12305 a42d40d781fc551b6dee7410ea34ac6f 568 Gene3D G3DSA:3.30.413.10 385 472 2.5E-9 T 22-04-2016 SMGD1_RS12305 a42d40d781fc551b6dee7410ea34ac6f 568 SUPERFAMILY SSF55124 6 122 5.4E-21 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 SMGD1_RS12305 a42d40d781fc551b6dee7410ea34ac6f 568 SUPERFAMILY SSF56014 125 283 6.28E-29 T 22-04-2016 SMGD1_RS12305 a42d40d781fc551b6dee7410ea34ac6f 568 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 397 413 - T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 SMGD1_RS12305 a42d40d781fc551b6dee7410ea34ac6f 568 PANTHER PTHR32439:SF0 4 501 4.6E-66 T 22-04-2016 SMGD1_RS12305 a42d40d781fc551b6dee7410ea34ac6f 568 Gene3D G3DSA:3.30.413.10 125 281 1.1E-22 T 22-04-2016 SMGD1_RS12305 a42d40d781fc551b6dee7410ea34ac6f 568 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 125 276 8.5E-17 T 22-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 SMGD1_RS12305 a42d40d781fc551b6dee7410ea34ac6f 568 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 394 467 2.4E-4 T 22-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 SMGD1_RS12305 a42d40d781fc551b6dee7410ea34ac6f 568 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 57 115 5.3E-15 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 SMGD1_RS10175 d5b182e804ac3b61b8b1202c245a9ad0 583 Gene3D G3DSA:3.40.50.10770 213 336 2.6E-12 T 22-04-2016 SMGD1_RS10175 d5b182e804ac3b61b8b1202c245a9ad0 583 Gene3D G3DSA:3.40.1350.10 427 575 3.2E-34 T 22-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 SMGD1_RS10175 d5b182e804ac3b61b8b1202c245a9ad0 583 SUPERFAMILY SSF52980 212 575 4.2E-46 T 22-04-2016 IPR011335 Restriction endonuclease type II-like SMGD1_RS10175 d5b182e804ac3b61b8b1202c245a9ad0 583 Pfam PF09002 Domain of unknown function (DUF1887) 214 568 2.7E-20 T 22-04-2016 IPR015093 Protein of unknown function DUF1887 SMGD1_RS13805 a45451e7d77bb5545e2b9f83d3ddc12e 224 PANTHER PTHR22939 78 216 1.6E-25 T 22-04-2016 SMGD1_RS13805 a45451e7d77bb5545e2b9f83d3ddc12e 224 PANTHER PTHR22939 1 62 1.6E-25 T 22-04-2016 SMGD1_RS13805 a45451e7d77bb5545e2b9f83d3ddc12e 224 Pfam PF02163 Peptidase family M50 114 180 3.1E-8 T 22-04-2016 IPR008915 Peptidase M50 GO:0004222|GO:0006508 SMGD1_RS13805 a45451e7d77bb5545e2b9f83d3ddc12e 224 PANTHER PTHR22939:SF104 78 216 1.6E-25 T 22-04-2016 SMGD1_RS13805 a45451e7d77bb5545e2b9f83d3ddc12e 224 PANTHER PTHR22939:SF104 1 62 1.6E-25 T 22-04-2016 SMGD1_RS01390 6d5ab6b991bfc2c55e2a9a280fc2092d 100 SUPERFAMILY SSF117916 1 98 8.17E-27 T 22-04-2016 SMGD1_RS01390 6d5ab6b991bfc2c55e2a9a280fc2092d 100 Pfam PF01883 Domain of unknown function DUF59 5 77 5.2E-15 T 22-04-2016 IPR002744 Domain of unknown function DUF59 SMGD1_RS00830 7838b63351ddd3d6f1db31f2c6121578 245 Pfam PF00994 Probable molybdopterin binding domain 6 160 1.4E-19 T 22-04-2016 IPR001453 MoaB/Mog domain SMGD1_RS00830 7838b63351ddd3d6f1db31f2c6121578 245 SUPERFAMILY SSF53218 2 164 7.46E-24 T 22-04-2016 IPR001453 MoaB/Mog domain SMGD1_RS00830 7838b63351ddd3d6f1db31f2c6121578 245 SMART SM00852 4 167 8.1E-14 T 22-04-2016 IPR001453 MoaB/Mog domain SMGD1_RS00830 7838b63351ddd3d6f1db31f2c6121578 245 Gene3D G3DSA:3.40.980.10 1 163 3.5E-17 T 22-04-2016 IPR001453 MoaB/Mog domain SMGD1_RS00830 7838b63351ddd3d6f1db31f2c6121578 245 PANTHER PTHR13939 1 236 1.1E-18 T 22-04-2016 SMGD1_RS04625 e2529a30ebc52c6013bb2968f56c3738 121 PANTHER PTHR21012 2 121 7.1E-60 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 SMGD1_RS04625 e2529a30ebc52c6013bb2968f56c3738 121 Gene3D G3DSA:2.40.40.20 1 118 5.1E-54 T 22-04-2016 SMGD1_RS04625 e2529a30ebc52c6013bb2968f56c3738 121 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 118 3.6E-53 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 SMGD1_RS04625 e2529a30ebc52c6013bb2968f56c3738 121 Pfam PF02261 Aspartate decarboxylase 1 114 6.4E-52 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 SMGD1_RS04625 e2529a30ebc52c6013bb2968f56c3738 121 PIRSF PIRSF006246 1 120 4.8E-51 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 SMGD1_RS04625 e2529a30ebc52c6013bb2968f56c3738 121 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 92 4.0E-43 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 SMGD1_RS04625 e2529a30ebc52c6013bb2968f56c3738 121 SUPERFAMILY SSF50692 1 117 1.82E-48 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain SMGD1_RS04625 e2529a30ebc52c6013bb2968f56c3738 121 PANTHER PTHR21012:SF0 2 121 7.1E-60 T 22-04-2016 SMGD1_RS04625 e2529a30ebc52c6013bb2968f56c3738 121 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 121 66.915 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 SMGD1_RS04475 c04abae907edbfb038f557cb011d176d 141 SMART SM00649 9 140 9.7E-69 T 22-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 SMGD1_RS04475 c04abae907edbfb038f557cb011d176d 141 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 1.4E-57 T 22-04-2016 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 SMGD1_RS04475 c04abae907edbfb038f557cb011d176d 141 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 66 2.5E-27 T 22-04-2016 IPR020784 Ribosomal protein L11, N-terminal SMGD1_RS04475 c04abae907edbfb038f557cb011d176d 141 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 141 28.343 T 22-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 SMGD1_RS04475 c04abae907edbfb038f557cb011d176d 141 Pfam PF00298 Ribosomal protein L11, RNA binding domain 71 139 6.0E-20 T 22-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 SMGD1_RS04475 c04abae907edbfb038f557cb011d176d 141 ProSitePatterns PS00359 Ribosomal protein L11 signature. 126 141 - T 22-04-2016 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 SMGD1_RS04475 c04abae907edbfb038f557cb011d176d 141 SUPERFAMILY SSF54747 3 71 1.01E-28 T 22-04-2016 IPR020784 Ribosomal protein L11, N-terminal SMGD1_RS04475 c04abae907edbfb038f557cb011d176d 141 Gene3D G3DSA:1.10.10.250 72 140 8.4E-25 T 22-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 SMGD1_RS04475 c04abae907edbfb038f557cb011d176d 141 PANTHER PTHR11661 1 141 7.9E-54 T 22-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 SMGD1_RS04475 c04abae907edbfb038f557cb011d176d 141 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 73 1.0E-12 T 22-04-2016 SMGD1_RS04475 c04abae907edbfb038f557cb011d176d 141 PANTHER PTHR11661:SF7 1 141 7.9E-54 T 22-04-2016 SMGD1_RS04475 c04abae907edbfb038f557cb011d176d 141 Gene3D G3DSA:3.30.1550.10 2 71 5.2E-35 T 22-04-2016 IPR020784 Ribosomal protein L11, N-terminal SMGD1_RS04475 c04abae907edbfb038f557cb011d176d 141 SUPERFAMILY SSF46906 67 140 1.31E-21 T 22-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 SMGD1_RS08100 a72b05a10a9505ebb967fbd9c47ec07c 156 Pfam PF00581 Rhodanese-like domain 42 137 8.9E-12 T 22-04-2016 IPR001763 Rhodanese-like domain SMGD1_RS08100 a72b05a10a9505ebb967fbd9c47ec07c 156 SMART SM00450 42 141 1.9E-14 T 22-04-2016 IPR001763 Rhodanese-like domain SMGD1_RS08100 a72b05a10a9505ebb967fbd9c47ec07c 156 Gene3D G3DSA:3.40.250.10 29 145 1.6E-28 T 22-04-2016 IPR001763 Rhodanese-like domain SMGD1_RS08100 a72b05a10a9505ebb967fbd9c47ec07c 156 SUPERFAMILY SSF52821 29 146 8.25E-27 T 22-04-2016 IPR001763 Rhodanese-like domain SMGD1_RS10665 c956be247c1027361bd597624b6f3e2f 346 PANTHER PTHR21091 1 346 1.0E-122 T 22-04-2016 SMGD1_RS10665 c956be247c1027361bd597624b6f3e2f 346 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 5 341 1.9E-122 T 22-04-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SMGD1_RS10665 c956be247c1027361bd597624b6f3e2f 346 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 2 344 45.636 T 22-04-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SMGD1_RS10665 c956be247c1027361bd597624b6f3e2f 346 SUPERFAMILY SSF51726 3 345 5.23E-106 T 22-04-2016 SMGD1_RS10665 c956be247c1027361bd597624b6f3e2f 346 PANTHER PTHR21091:SF2 1 346 1.0E-122 T 22-04-2016 SMGD1_RS10665 c956be247c1027361bd597624b6f3e2f 346 Gene3D G3DSA:3.20.20.210 3 345 4.8E-129 T 22-04-2016 SMGD1_RS10665 c956be247c1027361bd597624b6f3e2f 346 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 4 342 1.4E-113 T 22-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SMGD1_RS10665 c956be247c1027361bd597624b6f3e2f 346 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 18 27 - T 22-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SMGD1_RS10665 c956be247c1027361bd597624b6f3e2f 346 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 142 158 - T 22-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SMGD1_RS03285 31f86b8a2b0b41b108f4e99f8ba11a2a 248 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 174 2.4E-4 T 22-04-2016 SMGD1_RS03285 31f86b8a2b0b41b108f4e99f8ba11a2a 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 4.0E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMGD1_RS03285 31f86b8a2b0b41b108f4e99f8ba11a2a 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 4.0E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMGD1_RS03285 31f86b8a2b0b41b108f4e99f8ba11a2a 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 4.0E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMGD1_RS03285 31f86b8a2b0b41b108f4e99f8ba11a2a 248 SUPERFAMILY SSF51735 5 247 2.62E-78 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS03285 31f86b8a2b0b41b108f4e99f8ba11a2a 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 SMGD1_RS03285 31f86b8a2b0b41b108f4e99f8ba11a2a 248 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 8 245 8.9E-92 T 22-04-2016 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 SMGD1_RS03285 31f86b8a2b0b41b108f4e99f8ba11a2a 248 PANTHER PTHR24322 155 187 4.0E-44 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMGD1_RS03285 31f86b8a2b0b41b108f4e99f8ba11a2a 248 PANTHER PTHR24322 10 139 4.0E-44 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMGD1_RS03285 31f86b8a2b0b41b108f4e99f8ba11a2a 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.3E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMGD1_RS03285 31f86b8a2b0b41b108f4e99f8ba11a2a 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 1.3E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMGD1_RS03285 31f86b8a2b0b41b108f4e99f8ba11a2a 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 1.3E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMGD1_RS03285 31f86b8a2b0b41b108f4e99f8ba11a2a 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 1.3E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMGD1_RS03285 31f86b8a2b0b41b108f4e99f8ba11a2a 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 1.3E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMGD1_RS03285 31f86b8a2b0b41b108f4e99f8ba11a2a 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 1.3E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMGD1_RS03285 31f86b8a2b0b41b108f4e99f8ba11a2a 248 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 246 1.3E-61 T 22-04-2016 SMGD1_RS03285 31f86b8a2b0b41b108f4e99f8ba11a2a 248 Gene3D G3DSA:3.40.50.720 2 246 3.9E-81 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS03285 31f86b8a2b0b41b108f4e99f8ba11a2a 248 PANTHER PTHR24322:SF328 155 187 4.0E-44 T 22-04-2016 SMGD1_RS03285 31f86b8a2b0b41b108f4e99f8ba11a2a 248 PANTHER PTHR24322:SF328 10 139 4.0E-44 T 22-04-2016 SMGD1_RS03670 4c6b876e951e9302e32b91550f5c6dfe 145 SUPERFAMILY SSF53927 2 143 3.85E-40 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 SMGD1_RS03670 4c6b876e951e9302e32b91550f5c6dfe 145 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 4 97 2.8E-21 T 22-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 SMGD1_RS03670 4c6b876e951e9302e32b91550f5c6dfe 145 PANTHER PTHR11079 1 143 4.4E-70 T 22-04-2016 SMGD1_RS03670 4c6b876e951e9302e32b91550f5c6dfe 145 Gene3D G3DSA:3.40.140.10 3 138 6.2E-38 T 22-04-2016 SMGD1_RS03670 4c6b876e951e9302e32b91550f5c6dfe 145 PANTHER PTHR11079:SF63 1 143 4.4E-70 T 22-04-2016 SMGD1_RS11220 6f3d145242b65c8a3b29b6fe5a32787f 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 1.6E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SMGD1_RS11220 6f3d145242b65c8a3b29b6fe5a32787f 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 1.6E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SMGD1_RS11220 6f3d145242b65c8a3b29b6fe5a32787f 195 Gene3D G3DSA:1.10.357.10 4 193 1.5E-31 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SMGD1_RS11220 6f3d145242b65c8a3b29b6fe5a32787f 195 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 58 2.9E-13 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SMGD1_RS11220 6f3d145242b65c8a3b29b6fe5a32787f 195 SUPERFAMILY SSF46689 4 71 7.7E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SMGD1_RS11220 6f3d145242b65c8a3b29b6fe5a32787f 195 PANTHER PTHR30055 4 183 8.3E-28 T 22-04-2016 SMGD1_RS11220 6f3d145242b65c8a3b29b6fe5a32787f 195 PANTHER PTHR30055:SF47 4 183 8.3E-28 T 22-04-2016 SMGD1_RS10740 f767cd8bc88df5706f9adac66a5d5dd3 279 PANTHER PTHR22550 27 273 1.8E-49 T 22-04-2016 SMGD1_RS10740 f767cd8bc88df5706f9adac66a5d5dd3 279 Gene3D G3DSA:3.40.50.410 54 240 1.1E-27 T 22-04-2016 IPR002035 von Willebrand factor, type A SMGD1_RS10740 f767cd8bc88df5706f9adac66a5d5dd3 279 SUPERFAMILY SSF53300 35 240 5.93E-36 T 22-04-2016 IPR002035 von Willebrand factor, type A SMGD1_RS10740 f767cd8bc88df5706f9adac66a5d5dd3 279 PANTHER PTHR22550:SF12 27 273 1.8E-49 T 22-04-2016 SMGD1_RS10740 f767cd8bc88df5706f9adac66a5d5dd3 279 Pfam PF00092 von Willebrand factor type A domain 55 236 4.9E-28 T 22-04-2016 IPR002035 von Willebrand factor, type A SMGD1_RS10740 f767cd8bc88df5706f9adac66a5d5dd3 279 SMART SM00327 53 243 1.9E-23 T 22-04-2016 IPR002035 von Willebrand factor, type A SMGD1_RS02475 aaf0142b5b6176f75e3e85628cb4ba7a 250 Gene3D G3DSA:3.40.190.80 149 249 1.5E-39 T 22-04-2016 SMGD1_RS02475 aaf0142b5b6176f75e3e85628cb4ba7a 250 PRINTS PR00377 Inositol monophosphatase superfamily signature 206 230 8.9E-12 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SMGD1_RS02475 aaf0142b5b6176f75e3e85628cb4ba7a 250 PRINTS PR00377 Inositol monophosphatase superfamily signature 84 100 8.9E-12 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SMGD1_RS02475 aaf0142b5b6176f75e3e85628cb4ba7a 250 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 8.9E-12 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SMGD1_RS02475 aaf0142b5b6176f75e3e85628cb4ba7a 250 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 8.9E-12 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SMGD1_RS02475 aaf0142b5b6176f75e3e85628cb4ba7a 250 PRINTS PR00377 Inositol monophosphatase superfamily signature 133 156 8.9E-12 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SMGD1_RS02475 aaf0142b5b6176f75e3e85628cb4ba7a 250 SUPERFAMILY SSF56655 10 247 1.57E-71 T 22-04-2016 SMGD1_RS02475 aaf0142b5b6176f75e3e85628cb4ba7a 250 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 8 249 5.3E-87 T 22-04-2016 IPR006240 3(2),5 -bisphosphate nucleotidase, bacterial GO:0000287|GO:0016020 KEGG: 00920+3.1.3.7 SMGD1_RS02475 aaf0142b5b6176f75e3e85628cb4ba7a 250 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 84 97 - T 22-04-2016 IPR020583 Inositol monophosphatase, metal-binding site SMGD1_RS02475 aaf0142b5b6176f75e3e85628cb4ba7a 250 Pfam PF00459 Inositol monophosphatase family 12 239 1.5E-53 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SMGD1_RS02475 aaf0142b5b6176f75e3e85628cb4ba7a 250 PANTHER PTHR20854:SF5 1 222 1.0E-77 T 22-04-2016 SMGD1_RS02475 aaf0142b5b6176f75e3e85628cb4ba7a 250 Gene3D G3DSA:3.30.540.10 10 148 1.4E-44 T 22-04-2016 SMGD1_RS02475 aaf0142b5b6176f75e3e85628cb4ba7a 250 PANTHER PTHR20854 1 222 1.0E-77 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SMGD1_RS00400 52f289b7d30335753e22c12266821466 372 Pfam PF00149 Calcineurin-like phosphoesterase 150 313 1.3E-13 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 SMGD1_RS00400 52f289b7d30335753e22c12266821466 372 SUPERFAMILY SSF56300 150 369 7.99E-40 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SMGD1_RS00400 52f289b7d30335753e22c12266821466 372 PANTHER PTHR31302:SF7 13 372 7.1E-69 T 22-04-2016 SMGD1_RS00400 52f289b7d30335753e22c12266821466 372 Gene3D G3DSA:3.60.21.10 148 323 4.0E-27 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SMGD1_RS00400 52f289b7d30335753e22c12266821466 372 PANTHER PTHR31302 13 372 7.1E-69 T 22-04-2016 SMGD1_RS12995 e6d3aef7478242bf5dbf846cb2525fb9 463 Pfam PF13435 Cytochrome c554 and c-prime 131 167 8.2E-5 T 22-04-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 SMGD1_RS12995 e6d3aef7478242bf5dbf846cb2525fb9 463 Pfam PF13435 Cytochrome c554 and c-prime 269 333 0.0013 T 22-04-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 SMGD1_RS12995 e6d3aef7478242bf5dbf846cb2525fb9 463 Gene3D G3DSA:1.10.710.10 128 245 3.0E-17 T 22-04-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 SMGD1_RS12995 e6d3aef7478242bf5dbf846cb2525fb9 463 Gene3D G3DSA:1.10.710.10 34 79 3.0E-17 T 22-04-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 SMGD1_RS12995 e6d3aef7478242bf5dbf846cb2525fb9 463 Gene3D G3DSA:3.90.10.10 295 393 7.0E-9 T 22-04-2016 SMGD1_RS12995 e6d3aef7478242bf5dbf846cb2525fb9 463 SUPERFAMILY SSF48695 241 437 9.05E-44 T 22-04-2016 IPR011031 Multihaem cytochrome SMGD1_RS12995 e6d3aef7478242bf5dbf846cb2525fb9 463 SUPERFAMILY SSF48695 35 58 9.05E-44 T 22-04-2016 IPR011031 Multihaem cytochrome SMGD1_RS12995 e6d3aef7478242bf5dbf846cb2525fb9 463 SUPERFAMILY SSF48695 106 211 9.05E-44 T 22-04-2016 IPR011031 Multihaem cytochrome SMGD1_RS00100 ac92eaa2110d4ca6d3a4444ac6cf1e5b 402 SUPERFAMILY SSF55874 258 397 1.44E-15 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS00100 ac92eaa2110d4ca6d3a4444ac6cf1e5b 402 Gene3D G3DSA:3.30.565.10 262 364 2.0E-14 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS00100 ac92eaa2110d4ca6d3a4444ac6cf1e5b 402 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 309 370 3.1E-8 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS00100 ac92eaa2110d4ca6d3a4444ac6cf1e5b 402 Pfam PF07568 Histidine kinase 209 282 2.7E-24 T 22-04-2016 IPR011495 Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain SMGD1_RS00100 ac92eaa2110d4ca6d3a4444ac6cf1e5b 402 PANTHER PTHR24423 7 25 4.8E-30 T 22-04-2016 SMGD1_RS00100 ac92eaa2110d4ca6d3a4444ac6cf1e5b 402 PANTHER PTHR24423 200 373 4.8E-30 T 22-04-2016 SMGD1_RS00100 ac92eaa2110d4ca6d3a4444ac6cf1e5b 402 PANTHER PTHR24423:SF468 7 25 4.8E-30 T 22-04-2016 SMGD1_RS00100 ac92eaa2110d4ca6d3a4444ac6cf1e5b 402 PANTHER PTHR24423:SF468 200 373 4.8E-30 T 22-04-2016 SMGD1_RS08150 efd6e436c17bee7f102d8485f54f7f11 226 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 127 209 7.2E-30 T 22-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 SMGD1_RS08150 efd6e436c17bee7f102d8485f54f7f11 226 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 6 214 34.59 T 22-04-2016 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19|UniPathway: UPA00031|UniPathway: UPA00031 SMGD1_RS08150 efd6e436c17bee7f102d8485f54f7f11 226 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 4 107 28.9 T 22-04-2016 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 SMGD1_RS08150 efd6e436c17bee7f102d8485f54f7f11 226 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 123 209 19.285 T 22-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 SMGD1_RS08150 efd6e436c17bee7f102d8485f54f7f11 226 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 128 212 3.8E-17 T 22-04-2016 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31|UniPathway: UPA00031 SMGD1_RS08150 efd6e436c17bee7f102d8485f54f7f11 226 PANTHER PTHR21256 1 224 2.4E-99 T 22-04-2016 SMGD1_RS08150 efd6e436c17bee7f102d8485f54f7f11 226 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 30 103 1.3E-32 T 22-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 SMGD1_RS08150 efd6e436c17bee7f102d8485f54f7f11 226 SUPERFAMILY SSF141734 6 110 8.76E-44 T 22-04-2016 SMGD1_RS08150 efd6e436c17bee7f102d8485f54f7f11 226 SUPERFAMILY SSF101386 125 213 1.18E-24 T 22-04-2016 SMGD1_RS08150 efd6e436c17bee7f102d8485f54f7f11 226 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 53 102 2.0E-20 T 22-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 SMGD1_RS13960 c382e0a28941af0cb6e6ad9664513854 177 SUPERFAMILY SSF53218 4 158 1.57E-45 T 22-04-2016 IPR001453 MoaB/Mog domain SMGD1_RS13960 c382e0a28941af0cb6e6ad9664513854 177 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 4 147 1.8E-41 T 22-04-2016 IPR001453 MoaB/Mog domain SMGD1_RS13960 c382e0a28941af0cb6e6ad9664513854 177 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 69 82 - T 22-04-2016 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 UniPathway: UPA00344 SMGD1_RS13960 c382e0a28941af0cb6e6ad9664513854 177 PANTHER PTHR10192 1 175 5.8E-90 T 22-04-2016 SMGD1_RS13960 c382e0a28941af0cb6e6ad9664513854 177 Pfam PF00994 Probable molybdopterin binding domain 7 150 2.1E-29 T 22-04-2016 IPR001453 MoaB/Mog domain SMGD1_RS13960 c382e0a28941af0cb6e6ad9664513854 177 Gene3D G3DSA:3.40.980.10 3 162 1.4E-55 T 22-04-2016 IPR001453 MoaB/Mog domain SMGD1_RS13960 c382e0a28941af0cb6e6ad9664513854 177 SMART SM00852 7 153 8.7E-25 T 22-04-2016 IPR001453 MoaB/Mog domain SMGD1_RS14015 1cdd0a8a68cd55f1e7ac21046c8a4a52 525 Gene3D G3DSA:3.30.70.1430 56 144 1.4E-14 T 22-04-2016 SMGD1_RS14015 1cdd0a8a68cd55f1e7ac21046c8a4a52 525 SUPERFAMILY SSF82693 56 144 1.65E-16 T 22-04-2016 SMGD1_RS14015 1cdd0a8a68cd55f1e7ac21046c8a4a52 525 SUPERFAMILY SSF82714 195 279 1.44E-9 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMGD1_RS14015 1cdd0a8a68cd55f1e7ac21046c8a4a52 525 PRINTS PR00702 Acriflavin resistance protein family signature 355 378 2.7E-25 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMGD1_RS14015 1cdd0a8a68cd55f1e7ac21046c8a4a52 525 PRINTS PR00702 Acriflavin resistance protein family signature 20 44 2.7E-25 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMGD1_RS14015 1cdd0a8a68cd55f1e7ac21046c8a4a52 525 PRINTS PR00702 Acriflavin resistance protein family signature 491 514 2.7E-25 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMGD1_RS14015 1cdd0a8a68cd55f1e7ac21046c8a4a52 525 PRINTS PR00702 Acriflavin resistance protein family signature 48 66 2.7E-25 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMGD1_RS14015 1cdd0a8a68cd55f1e7ac21046c8a4a52 525 PRINTS PR00702 Acriflavin resistance protein family signature 409 433 2.7E-25 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMGD1_RS14015 1cdd0a8a68cd55f1e7ac21046c8a4a52 525 Gene3D G3DSA:3.30.2090.10 194 279 3.2E-10 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SMGD1_RS14015 1cdd0a8a68cd55f1e7ac21046c8a4a52 525 Gene3D G3DSA:1.20.1640.10 320 522 1.5E-38 T 22-04-2016 SMGD1_RS14015 1cdd0a8a68cd55f1e7ac21046c8a4a52 525 PANTHER PTHR32063 12 520 3.4E-130 T 22-04-2016 SMGD1_RS14015 1cdd0a8a68cd55f1e7ac21046c8a4a52 525 Pfam PF00873 AcrB/AcrD/AcrF family 17 522 2.5E-71 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SMGD1_RS14015 1cdd0a8a68cd55f1e7ac21046c8a4a52 525 Gene3D G3DSA:3.30.70.1320 293 319 5.3E-4 T 22-04-2016 SMGD1_RS14015 1cdd0a8a68cd55f1e7ac21046c8a4a52 525 Gene3D G3DSA:3.30.70.1320 151 191 5.3E-4 T 22-04-2016 SMGD1_RS14015 1cdd0a8a68cd55f1e7ac21046c8a4a52 525 PANTHER PTHR32063:SF16 12 520 3.4E-130 T 22-04-2016 SMGD1_RS14015 1cdd0a8a68cd55f1e7ac21046c8a4a52 525 SUPERFAMILY SSF82866 314 516 1.44E-34 T 22-04-2016 SMGD1_RS06880 07d45cd9fc14a91b2bdf1c330fb0a1d6 478 SUPERFAMILY SSF102114 166 397 4.71E-47 T 22-04-2016 SMGD1_RS06880 07d45cd9fc14a91b2bdf1c330fb0a1d6 478 Pfam PF02310 B12 binding domain 26 136 1.4E-14 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 SMGD1_RS06880 07d45cd9fc14a91b2bdf1c330fb0a1d6 478 PANTHER PTHR11918:SF64 31 407 1.9E-92 T 22-04-2016 SMGD1_RS06880 07d45cd9fc14a91b2bdf1c330fb0a1d6 478 SUPERFAMILY SSF52242 32 158 4.12E-5 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 SMGD1_RS06880 07d45cd9fc14a91b2bdf1c330fb0a1d6 478 PANTHER PTHR11918 31 407 1.9E-92 T 22-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein SMGD1_RS06880 07d45cd9fc14a91b2bdf1c330fb0a1d6 478 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 5 11 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 SMGD1_RS06880 07d45cd9fc14a91b2bdf1c330fb0a1d6 478 Pfam PF04055 Radical SAM superfamily 209 370 1.8E-21 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SMGD1_RS06880 07d45cd9fc14a91b2bdf1c330fb0a1d6 478 Gene3D G3DSA:3.80.30.20 206 418 1.6E-46 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe SMGD1_RS06880 07d45cd9fc14a91b2bdf1c330fb0a1d6 478 SMART SM00729 204 410 2.1E-36 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 SMGD1_RS08740 2a6479fba142800fd404bce606c86cb0 419 SUPERFAMILY SSF52540 5 172 1.47E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS08740 2a6479fba142800fd404bce606c86cb0 419 Pfam PF05970 PIF1-like helicase 13 209 2.7E-31 T 22-04-2016 IPR010285 DNA helicase Pif1-like GO:0000723|GO:0003678|GO:0006281 SMGD1_RS08740 2a6479fba142800fd404bce606c86cb0 419 Gene3D G3DSA:3.40.50.300 134 235 1.2E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS08740 2a6479fba142800fd404bce606c86cb0 419 Gene3D G3DSA:3.40.50.300 339 389 1.2E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS08740 2a6479fba142800fd404bce606c86cb0 419 Pfam PF02689 Helicase 345 394 2.1E-4 T 22-04-2016 IPR003840 DNA helicase GO:0004386|GO:0005524 SMGD1_RS08740 2a6479fba142800fd404bce606c86cb0 419 PANTHER PTHR23274 2 396 2.1E-83 T 22-04-2016 IPR003840 DNA helicase GO:0004386|GO:0005524 SMGD1_RS08740 2a6479fba142800fd404bce606c86cb0 419 SUPERFAMILY SSF52540 343 412 2.97E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS08740 2a6479fba142800fd404bce606c86cb0 419 SUPERFAMILY SSF52540 128 317 2.97E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS08740 2a6479fba142800fd404bce606c86cb0 419 Gene3D G3DSA:3.40.50.300 8 133 1.9E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS08740 2a6479fba142800fd404bce606c86cb0 419 SMART SM00382 13 156 0.0014 T 22-04-2016 IPR003593 AAA+ ATPase domain SMGD1_RS04385 76c6d06c196fcddb73d6b5d543f724f5 143 PANTHER PTHR30435:SF12 2 130 3.8E-27 T 22-04-2016 SMGD1_RS04385 76c6d06c196fcddb73d6b5d543f724f5 143 PIRSF PIRSF002889 1 139 7.3E-41 T 22-04-2016 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 SMGD1_RS04385 76c6d06c196fcddb73d6b5d543f724f5 143 PANTHER PTHR30435 2 130 3.8E-27 T 22-04-2016 SMGD1_RS04385 76c6d06c196fcddb73d6b5d543f724f5 143 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 6 136 5.7E-33 T 22-04-2016 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 SMGD1_RS04385 76c6d06c196fcddb73d6b5d543f724f5 143 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 15 35 - T 22-04-2016 IPR019776 Flagellar basal body rod protein, conserved site SMGD1_RS04385 76c6d06c196fcddb73d6b5d543f724f5 143 Pfam PF00460 Flagella basal body rod protein 15 36 2.0E-6 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 SMGD1_RS09290 8df260cc771db903851910835ea25876 580 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 452 537 2.2E-11 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS09290 8df260cc771db903851910835ea25876 580 Pfam PF00990 Diguanylate cyclase, GGDEF domain 453 537 3.1E-12 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS09290 8df260cc771db903851910835ea25876 580 TIGRFAM TIGR00277 HDIG: HDIG domain 265 355 1.5E-10 T 22-04-2016 IPR006675 HDIG domain SMGD1_RS09290 8df260cc771db903851910835ea25876 580 SMART SM00471 261 396 4.2E-14 T 22-04-2016 IPR003607 HD/PDEase domain SMGD1_RS09290 8df260cc771db903851910835ea25876 580 Gene3D G3DSA:3.30.70.270 453 537 8.2E-11 T 22-04-2016 SMGD1_RS09290 8df260cc771db903851910835ea25876 580 SUPERFAMILY SSF109604 251 423 4.94E-41 T 22-04-2016 SMGD1_RS09290 8df260cc771db903851910835ea25876 580 SUPERFAMILY SSF55073 457 543 2.43E-9 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS09290 8df260cc771db903851910835ea25876 580 Gene3D G3DSA:1.10.3210.10 257 425 5.5E-26 T 22-04-2016 IPR006674 HD domain SMGD1_RS09290 8df260cc771db903851910835ea25876 580 Pfam PF11845 Protein of unknown function (DUF3365) 18 199 5.2E-25 T 22-04-2016 IPR021796 Protein of unknown function DUF3365 SMGD1_RS09290 8df260cc771db903851910835ea25876 580 Pfam PF01966 HD domain 266 387 3.4E-24 T 22-04-2016 IPR006674 HD domain SMGD1_RS03855 7363c162f07beda04843dff84129f968 388 PANTHER PTHR23417 182 344 4.8E-46 T 22-04-2016 SMGD1_RS03855 7363c162f07beda04843dff84129f968 388 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 37 199 8.7E-39 T 22-04-2016 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675|UniPathway: UPA00958 SMGD1_RS03855 7363c162f07beda04843dff84129f968 388 PANTHER PTHR23417:SF2 182 344 4.8E-46 T 22-04-2016 SMGD1_RS03855 7363c162f07beda04843dff84129f968 388 PANTHER PTHR23417:SF2 6 131 4.8E-46 T 22-04-2016 SMGD1_RS03855 7363c162f07beda04843dff84129f968 388 PANTHER PTHR23417 6 131 4.8E-46 T 22-04-2016 SMGD1_RS01120 b7a6140f2df78aa7a8a3ec7375dafbc7 261 Pfam PF11251 Protein of unknown function (DUF3050) 16 251 2.2E-88 T 22-04-2016 IPR024423 Protein of unknown function DUF3050 SMGD1_RS01120 b7a6140f2df78aa7a8a3ec7375dafbc7 261 Gene3D G3DSA:1.20.910.10 140 259 1.8E-7 T 22-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 SMGD1_RS01120 b7a6140f2df78aa7a8a3ec7375dafbc7 261 SUPERFAMILY SSF48613 141 257 3.39E-10 T 22-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 SMGD1_RS12520 dc7250284756e87f549d3ef47d59655a 529 PANTHER PTHR32439 11 502 4.2E-133 T 22-04-2016 SMGD1_RS12520 dc7250284756e87f549d3ef47d59655a 529 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 65 124 4.3E-14 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 SMGD1_RS12520 dc7250284756e87f549d3ef47d59655a 529 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 313 374 1.6E-10 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 SMGD1_RS12520 dc7250284756e87f549d3ef47d59655a 529 SUPERFAMILY SSF56014 387 508 2.62E-27 T 22-04-2016 SMGD1_RS12520 dc7250284756e87f549d3ef47d59655a 529 Gene3D G3DSA:3.30.413.10 134 291 1.3E-39 T 22-04-2016 SMGD1_RS12520 dc7250284756e87f549d3ef47d59655a 529 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 431 447 - T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 SMGD1_RS12520 dc7250284756e87f549d3ef47d59655a 529 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 390 503 3.6E-9 T 22-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 SMGD1_RS12520 dc7250284756e87f549d3ef47d59655a 529 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 134 285 2.7E-38 T 22-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 SMGD1_RS12520 dc7250284756e87f549d3ef47d59655a 529 SUPERFAMILY SSF56014 134 294 3.53E-44 T 22-04-2016 SMGD1_RS12520 dc7250284756e87f549d3ef47d59655a 529 Gene3D G3DSA:3.30.413.10 388 519 6.9E-27 T 22-04-2016 SMGD1_RS12520 dc7250284756e87f549d3ef47d59655a 529 PANTHER PTHR32439:SF0 11 502 4.2E-133 T 22-04-2016 SMGD1_RS12520 dc7250284756e87f549d3ef47d59655a 529 PRINTS PR00397 Sirohaem Fe-binding site signature 386 404 1.7E-8 T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 SMGD1_RS12520 dc7250284756e87f549d3ef47d59655a 529 PRINTS PR00397 Sirohaem Fe-binding site signature 431 449 1.7E-8 T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 SMGD1_RS12520 dc7250284756e87f549d3ef47d59655a 529 SUPERFAMILY SSF55124 9 132 8.5E-21 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 SMGD1_RS12520 dc7250284756e87f549d3ef47d59655a 529 Gene3D G3DSA:3.90.480.10 65 131 8.5E-37 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 SMGD1_RS12520 dc7250284756e87f549d3ef47d59655a 529 Gene3D G3DSA:3.90.480.10 301 378 8.5E-37 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 SMGD1_RS12520 dc7250284756e87f549d3ef47d59655a 529 SUPERFAMILY SSF55124 267 397 8.01E-16 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 SMGD1_RS05740 490952e51f92fe1c680aba4d3623f573 404 Gene3D G3DSA:3.90.1150.10 249 373 2.7E-39 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SMGD1_RS05740 490952e51f92fe1c680aba4d3623f573 404 PIRSF PIRSF005572 1 382 1.2E-120 T 22-04-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 SMGD1_RS05740 490952e51f92fe1c680aba4d3623f573 404 SUPERFAMILY SSF53383 3 376 2.21E-98 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SMGD1_RS05740 490952e51f92fe1c680aba4d3623f573 404 Pfam PF00266 Aminotransferase class-V 3 366 4.6E-83 T 22-04-2016 IPR000192 Aminotransferase class V domain SMGD1_RS05740 490952e51f92fe1c680aba4d3623f573 404 TIGRFAM TIGR03403 nifS_epsilon: cysteine desulfurase, NifS family 3 384 7.2E-219 T 22-04-2016 IPR017773 Cysteine desulfurase NifS, proteobacteria GO:0006534|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|UniPathway: UPA00266 SMGD1_RS05740 490952e51f92fe1c680aba4d3623f573 404 PANTHER PTHR11601:SF45 3 389 7.6E-163 T 22-04-2016 SMGD1_RS05740 490952e51f92fe1c680aba4d3623f573 404 Gene3D G3DSA:3.40.640.10 15 248 4.2E-84 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SMGD1_RS05740 490952e51f92fe1c680aba4d3623f573 404 PANTHER PTHR11601 3 389 7.6E-163 T 22-04-2016 SMGD1_RS05740 490952e51f92fe1c680aba4d3623f573 404 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 195 214 - T 22-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site SMGD1_RS00050 7c833098e5c8336fc84aa38d09243e8f 256 Pfam PF06934 Fatty acid cis/trans isomerase (CTI) 89 248 5.7E-44 T 22-04-2016 IPR010706 Fatty acid cis-trans isomerase SMGD1_RS00305 fada4a565ce349630420939dd7b95b0e 156 PIRSF PIRSF010312 1 156 3.3E-44 T 22-04-2016 IPR016568 Sulphur oxidation, SoxY SMGD1_RS00305 fada4a565ce349630420939dd7b95b0e 156 Pfam PF13501 Sulfur oxidation protein SoxY 46 155 8.6E-36 T 22-04-2016 IPR032711 Ig-like SoxY domain SMGD1_RS00305 fada4a565ce349630420939dd7b95b0e 156 TIGRFAM TIGR04488 SoxY_true_GGCGG: thiosulfate oxidation carrier protein SoxY 2 156 8.3E-50 T 22-04-2016 IPR016568 Sulphur oxidation, SoxY SMGD1_RS02865 44782f5cc889da77bafdba2d63bc7272 139 Pfam PF00583 Acetyltransferase (GNAT) family 52 128 6.2E-11 T 22-04-2016 IPR000182 GNAT domain GO:0008080 SMGD1_RS02865 44782f5cc889da77bafdba2d63bc7272 139 SUPERFAMILY SSF55729 1 131 1.44E-19 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMGD1_RS02865 44782f5cc889da77bafdba2d63bc7272 139 Gene3D G3DSA:3.40.630.30 1 136 5.5E-23 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMGD1_RS13035 bb3130020d31220f85063760b724d5c5 145 Pfam PF05433 Glycine zipper 2TM domain 60 96 9.6E-6 T 22-04-2016 IPR008816 Glycine zipper 2TM domain GO:0019867 SMGD1_RS12950 cacd9f06ce20d3f373dd5855fa64a904 116 PANTHER PTHR33823 3 114 1.4E-18 T 22-04-2016 SMGD1_RS12950 cacd9f06ce20d3f373dd5855fa64a904 116 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 79 114 2.1E-12 T 22-04-2016 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 SMGD1_RS12950 cacd9f06ce20d3f373dd5855fa64a904 116 SUPERFAMILY SSF109635 3 80 6.02E-13 T 22-04-2016 SMGD1_RS12950 cacd9f06ce20d3f373dd5855fa64a904 116 SUPERFAMILY SSF57716 81 114 5.85E-10 T 22-04-2016 SMGD1_RS12950 cacd9f06ce20d3f373dd5855fa64a904 116 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 84 108 - T 22-04-2016 IPR020458 Zinc finger, DksA/TraR C4-type conserved site SMGD1_RS08545 c0ebbc020da6017c18dc14ac488c21bc 566 Gene3D G3DSA:1.10.1060.10 251 276 9.5E-9 T 22-04-2016 SMGD1_RS08545 c0ebbc020da6017c18dc14ac488c21bc 566 Gene3D G3DSA:1.10.1060.10 410 431 9.5E-9 T 22-04-2016 SMGD1_RS08545 c0ebbc020da6017c18dc14ac488c21bc 566 Pfam PF13187 4Fe-4S dicluster domain 215 257 1.3E-6 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SMGD1_RS08545 c0ebbc020da6017c18dc14ac488c21bc 566 PANTHER PTHR24960 174 264 1.1E-21 T 22-04-2016 SMGD1_RS08545 c0ebbc020da6017c18dc14ac488c21bc 566 PANTHER PTHR24960 421 554 1.1E-21 T 22-04-2016 SMGD1_RS08545 c0ebbc020da6017c18dc14ac488c21bc 566 Gene3D G3DSA:3.30.70.20 432 481 4.9E-13 T 22-04-2016 SMGD1_RS08545 c0ebbc020da6017c18dc14ac488c21bc 566 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 460 471 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SMGD1_RS08545 c0ebbc020da6017c18dc14ac488c21bc 566 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 243 254 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SMGD1_RS08545 c0ebbc020da6017c18dc14ac488c21bc 566 SUPERFAMILY SSF54862 186 264 8.59E-30 T 22-04-2016 SMGD1_RS08545 c0ebbc020da6017c18dc14ac488c21bc 566 SUPERFAMILY SSF54862 422 523 8.59E-30 T 22-04-2016 SMGD1_RS08545 c0ebbc020da6017c18dc14ac488c21bc 566 PANTHER PTHR24960:SF43 174 264 1.1E-21 T 22-04-2016 SMGD1_RS08545 c0ebbc020da6017c18dc14ac488c21bc 566 PANTHER PTHR24960:SF43 421 554 1.1E-21 T 22-04-2016 SMGD1_RS08545 c0ebbc020da6017c18dc14ac488c21bc 566 Gene3D G3DSA:3.30.70.20 188 250 3.3E-11 T 22-04-2016 SMGD1_RS11405 22d1f484af32b71305655ac1168468c8 131 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 4 83 4.3E-24 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 SMGD1_RS11405 22d1f484af32b71305655ac1168468c8 131 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 2 124 17.022 T 22-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SMGD1_RS11405 22d1f484af32b71305655ac1168468c8 131 PANTHER PTHR13822 1 125 5.9E-19 T 22-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SMGD1_RS11405 22d1f484af32b71305655ac1168468c8 131 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 11 90 4.0E-31 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 SMGD1_RS11405 22d1f484af32b71305655ac1168468c8 131 Gene3D G3DSA:2.60.15.10 1 85 3.1E-25 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 SMGD1_RS11405 22d1f484af32b71305655ac1168468c8 131 SUPERFAMILY SSF51344 3 84 2.62E-21 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 SMGD1_RS11405 22d1f484af32b71305655ac1168468c8 131 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 4 129 1.9E-33 T 22-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SMGD1_RS02735 04e8323ec7b2dae233e793a70c4c5aa8 577 Pfam PF00924 Mechanosensitive ion channel 332 560 2.6E-63 T 22-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 SMGD1_RS02735 04e8323ec7b2dae233e793a70c4c5aa8 577 PANTHER PTHR30566:SF5 512 572 1.0E-54 T 22-04-2016 SMGD1_RS02735 04e8323ec7b2dae233e793a70c4c5aa8 577 PANTHER PTHR30566:SF5 213 489 1.0E-54 T 22-04-2016 SMGD1_RS02735 04e8323ec7b2dae233e793a70c4c5aa8 577 SUPERFAMILY SSF50182 374 439 3.27E-18 T 22-04-2016 IPR010920 LSM domain SMGD1_RS02735 04e8323ec7b2dae233e793a70c4c5aa8 577 Gene3D G3DSA:3.30.70.100 446 556 1.2E-13 T 22-04-2016 SMGD1_RS02735 04e8323ec7b2dae233e793a70c4c5aa8 577 SUPERFAMILY SSF82689 446 571 5.62E-13 T 22-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 SMGD1_RS02735 04e8323ec7b2dae233e793a70c4c5aa8 577 Gene3D G3DSA:2.30.30.60 391 439 8.4E-20 T 22-04-2016 SMGD1_RS02735 04e8323ec7b2dae233e793a70c4c5aa8 577 PANTHER PTHR30566 512 572 1.0E-54 T 22-04-2016 SMGD1_RS02735 04e8323ec7b2dae233e793a70c4c5aa8 577 PANTHER PTHR30566 213 489 1.0E-54 T 22-04-2016 SMGD1_RS02735 04e8323ec7b2dae233e793a70c4c5aa8 577 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 404 438 - T 22-04-2016 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 SMGD1_RS02735 04e8323ec7b2dae233e793a70c4c5aa8 577 SUPERFAMILY SSF82861 288 373 6.67E-9 T 22-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 SMGD1_RS00920 d6ed7dd12376116f32d5a89d88d4c6a7 686 Pfam PF12146 Serine aminopeptidase, S33 453 667 3.0E-21 T 22-04-2016 IPR022742 Serine aminopeptidase, S33 SMGD1_RS00920 d6ed7dd12376116f32d5a89d88d4c6a7 686 SMART SM00563 36 177 5.3E-4 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 SMGD1_RS00920 d6ed7dd12376116f32d5a89d88d4c6a7 686 SUPERFAMILY SSF53474 432 686 7.56E-30 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SMGD1_RS00920 d6ed7dd12376116f32d5a89d88d4c6a7 686 Gene3D G3DSA:3.40.50.1820 448 685 2.9E-40 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SMGD1_RS00920 d6ed7dd12376116f32d5a89d88d4c6a7 686 SUPERFAMILY SSF69593 9 263 6.28E-12 T 22-04-2016 SMGD1_RS00920 d6ed7dd12376116f32d5a89d88d4c6a7 686 Pfam PF01553 Acyltransferase 22 173 1.1E-5 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 SMGD1_RS00920 d6ed7dd12376116f32d5a89d88d4c6a7 686 PANTHER PTHR11614 454 685 8.1E-27 T 22-04-2016 SMGD1_RS04545 0acfb4cd8061592b9ddd1cded195255f 144 Pfam PF07603 Protein of unknown function (DUF1566) 27 139 1.4E-18 T 22-04-2016 IPR011460 Protein of unknown function DUF1566 SMGD1_RS04735 3a1e1f586cc78bea6696a07548dba902 103 SUPERFAMILY SSF46785 4 80 2.07E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMGD1_RS04735 3a1e1f586cc78bea6696a07548dba902 103 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 8 23 1.6E-15 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SMGD1_RS04735 3a1e1f586cc78bea6696a07548dba902 103 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 28 39 1.6E-15 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SMGD1_RS04735 3a1e1f586cc78bea6696a07548dba902 103 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 41 56 1.6E-15 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SMGD1_RS04735 3a1e1f586cc78bea6696a07548dba902 103 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 56 71 1.6E-15 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SMGD1_RS04735 3a1e1f586cc78bea6696a07548dba902 103 Gene3D G3DSA:1.10.10.10 9 84 4.3E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMGD1_RS04735 3a1e1f586cc78bea6696a07548dba902 103 Pfam PF01022 Bacterial regulatory protein, arsR family 13 59 2.4E-13 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SMGD1_RS04735 3a1e1f586cc78bea6696a07548dba902 103 PANTHER PTHR33154 13 96 6.6E-18 T 22-04-2016 SMGD1_RS04735 3a1e1f586cc78bea6696a07548dba902 103 SMART SM00418 6 84 2.6E-17 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SMGD1_RS06430 58fa4144f7711cdc96a87872dee48680 325 SUPERFAMILY SSF52402 1 230 3.97E-31 T 22-04-2016 SMGD1_RS06430 58fa4144f7711cdc96a87872dee48680 325 PANTHER PTHR11933:SF6 1 232 7.3E-96 T 22-04-2016 SMGD1_RS06430 58fa4144f7711cdc96a87872dee48680 325 Pfam PF03054 tRNA methyl transferase 2 132 1.3E-9 T 22-04-2016 SMGD1_RS06430 58fa4144f7711cdc96a87872dee48680 325 Gene3D G3DSA:3.40.50.620 1 191 1.8E-36 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMGD1_RS06430 58fa4144f7711cdc96a87872dee48680 325 PANTHER PTHR11933 1 232 7.3E-96 T 22-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 SMGD1_RS12320 3a403c3e526fb376742ca44ee2b583c3 702 Gene3D G3DSA:3.20.70.20 125 273 2.0E-181 T 22-04-2016 SMGD1_RS12320 3a403c3e526fb376742ca44ee2b583c3 702 Gene3D G3DSA:3.20.70.20 319 689 2.0E-181 T 22-04-2016 SMGD1_RS12320 3a403c3e526fb376742ca44ee2b583c3 702 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 120 688 8.9E-163 T 22-04-2016 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 SMGD1_RS12320 3a403c3e526fb376742ca44ee2b583c3 702 Pfam PF03477 ATP cone domain 4 86 2.3E-15 T 22-04-2016 IPR005144 ATP-cone domain SMGD1_RS12320 3a403c3e526fb376742ca44ee2b583c3 702 SUPERFAMILY SSF51998 121 691 6.1E-139 T 22-04-2016 SMGD1_RS12320 3a403c3e526fb376742ca44ee2b583c3 702 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 119 689 1.2E-118 T 22-04-2016 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 SMGD1_RS12320 3a403c3e526fb376742ca44ee2b583c3 702 PANTHER PTHR21075 1 689 1.3E-169 T 22-04-2016 SMGD1_RS00640 98e1e9efd281683ff154f7e2f4d8b7e5 319 Gene3D G3DSA:3.40.190.10 24 111 4.5E-10 T 22-04-2016 SMGD1_RS00640 98e1e9efd281683ff154f7e2f4d8b7e5 319 Gene3D G3DSA:3.40.190.10 260 301 4.5E-10 T 22-04-2016 SMGD1_RS00640 98e1e9efd281683ff154f7e2f4d8b7e5 319 Pfam PF13531 Bacterial extracellular solute-binding protein 26 301 3.6E-31 T 22-04-2016 SMGD1_RS00640 98e1e9efd281683ff154f7e2f4d8b7e5 319 PANTHER PTHR30632:SF0 260 317 1.3E-64 T 22-04-2016 SMGD1_RS00640 98e1e9efd281683ff154f7e2f4d8b7e5 319 PANTHER PTHR30632:SF0 12 234 1.3E-64 T 22-04-2016 SMGD1_RS00640 98e1e9efd281683ff154f7e2f4d8b7e5 319 SUPERFAMILY SSF53850 23 302 4.04E-50 T 22-04-2016 SMGD1_RS00640 98e1e9efd281683ff154f7e2f4d8b7e5 319 PANTHER PTHR30632 260 317 1.3E-64 T 22-04-2016 SMGD1_RS00640 98e1e9efd281683ff154f7e2f4d8b7e5 319 PANTHER PTHR30632 12 234 1.3E-64 T 22-04-2016 SMGD1_RS00640 98e1e9efd281683ff154f7e2f4d8b7e5 319 TIGRFAM TIGR03730 tungstate_WtpA: tungstate ABC transporter binding protein WtpA 24 288 4.3E-98 T 22-04-2016 IPR022498 ABC transporter, tungstate-binding, WtpA GO:1901359 SMGD1_RS00640 98e1e9efd281683ff154f7e2f4d8b7e5 319 Gene3D G3DSA:3.40.190.10 112 249 1.2E-54 T 22-04-2016 SMGD1_RS02745 eeb16c8c11fbbc3c519089680e21c6ff 247 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 11 109 8.9E-27 T 22-04-2016 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 SMGD1_RS02745 eeb16c8c11fbbc3c519089680e21c6ff 247 PANTHER PTHR11921:SF13 8 246 1.1E-79 T 22-04-2016 SMGD1_RS02745 eeb16c8c11fbbc3c519089680e21c6ff 247 SUPERFAMILY SSF46548 129 242 1.36E-23 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 SMGD1_RS02745 eeb16c8c11fbbc3c519089680e21c6ff 247 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 62 70 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 SMGD1_RS02745 eeb16c8c11fbbc3c519089680e21c6ff 247 SUPERFAMILY SSF54292 8 108 4.72E-25 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 SMGD1_RS02745 eeb16c8c11fbbc3c519089680e21c6ff 247 Gene3D G3DSA:3.10.20.30 3 108 1.1E-31 T 22-04-2016 IPR012675 Beta-grasp domain SMGD1_RS02745 eeb16c8c11fbbc3c519089680e21c6ff 247 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 14 236 1.3E-49 T 22-04-2016 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 SMGD1_RS02745 eeb16c8c11fbbc3c519089680e21c6ff 247 PANTHER PTHR11921 8 246 1.1E-79 T 22-04-2016 SMGD1_RS02745 eeb16c8c11fbbc3c519089680e21c6ff 247 Gene3D G3DSA:1.10.1060.10 120 244 2.8E-29 T 22-04-2016 SMGD1_RS02745 eeb16c8c11fbbc3c519089680e21c6ff 247 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 156 167 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SMGD1_RS02745 eeb16c8c11fbbc3c519089680e21c6ff 247 Pfam PF13183 4Fe-4S dicluster domain 152 226 5.5E-9 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SMGD1_RS09580 775bdb0d47e01cacb00ac22f0d88a13a 570 Gene3D G3DSA:3.40.1130.10 72 196 8.1E-4 T 22-04-2016 SMGD1_RS09580 775bdb0d47e01cacb00ac22f0d88a13a 570 SUPERFAMILY SSF55729 314 448 5.3E-21 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMGD1_RS09580 775bdb0d47e01cacb00ac22f0d88a13a 570 PANTHER PTHR37323 49 570 4.8E-87 T 22-04-2016 SMGD1_RS09580 775bdb0d47e01cacb00ac22f0d88a13a 570 PANTHER PTHR37323:SF1 49 570 4.8E-87 T 22-04-2016 SMGD1_RS09580 775bdb0d47e01cacb00ac22f0d88a13a 570 SUPERFAMILY SSF69593 49 264 4.97E-16 T 22-04-2016 SMGD1_RS09580 775bdb0d47e01cacb00ac22f0d88a13a 570 Pfam PF01553 Acyltransferase 72 195 1.9E-12 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 SMGD1_RS09580 775bdb0d47e01cacb00ac22f0d88a13a 570 Pfam PF13444 Acetyltransferase (GNAT) domain 324 424 9.8E-23 T 22-04-2016 SMGD1_RS09580 775bdb0d47e01cacb00ac22f0d88a13a 570 Gene3D G3DSA:3.40.630.30 315 443 1.5E-5 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMGD1_RS09580 775bdb0d47e01cacb00ac22f0d88a13a 570 SMART SM00563 81 198 2.7E-9 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 SMGD1_RS10860 2b03f0f8ccbcaf19d6cf5a34ccaa2a44 204 SMART SM01207 13 196 2.1E-63 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 SMGD1_RS10860 2b03f0f8ccbcaf19d6cf5a34ccaa2a44 204 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 8 203 3.1E-46 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 SMGD1_RS10860 2b03f0f8ccbcaf19d6cf5a34ccaa2a44 204 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 10 204 17.877 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 SMGD1_RS10860 2b03f0f8ccbcaf19d6cf5a34ccaa2a44 204 Pfam PF02660 Glycerol-3-phosphate acyltransferase 15 195 2.8E-39 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 SMGD1_RS10860 2b03f0f8ccbcaf19d6cf5a34ccaa2a44 204 PANTHER PTHR30309:SF0 2 204 2.5E-46 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 SMGD1_RS10860 2b03f0f8ccbcaf19d6cf5a34ccaa2a44 204 PANTHER PTHR30309 2 204 2.5E-46 T 22-04-2016 SMGD1_RS02755 e332df171a2b1f5dd140cfbac7390739 243 PIRSF PIRSF000177 1 243 2.1E-77 T 22-04-2016 IPR004224 Fumarate reductase respiratory complex, transmembrane subunit GO:0006099 SMGD1_RS02755 e332df171a2b1f5dd140cfbac7390739 243 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 98 207 2.1E-13 T 22-04-2016 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 UniPathway: UPA00223 SMGD1_RS02755 e332df171a2b1f5dd140cfbac7390739 243 Gene3D G3DSA:1.20.950.10 4 236 5.6E-74 T 22-04-2016 SMGD1_RS02755 e332df171a2b1f5dd140cfbac7390739 243 SUPERFAMILY SSF81343 7 226 4.19E-57 T 22-04-2016 SMGD1_RS05815 5ff87e63c5e54be9eeead4a25a963202 99 Pfam PF08770 Sulphur oxidation protein SoxZ 6 95 1.9E-19 T 22-04-2016 IPR014880 Sulphur oxidation protein SoxZ SMGD1_RS05815 5ff87e63c5e54be9eeead4a25a963202 99 Gene3D G3DSA:2.60.40.10 1 99 1.5E-17 T 22-04-2016 IPR013783 Immunoglobulin-like fold SMGD1_RS05815 5ff87e63c5e54be9eeead4a25a963202 99 TIGRFAM TIGR04490 SoxZ_true: thiosulfate oxidation carrier complex protein SoxZ 5 98 9.9E-24 T 22-04-2016 IPR030995 Thiosulfate oxidation carrier complex protein SoxZ SMGD1_RS05815 5ff87e63c5e54be9eeead4a25a963202 99 SUPERFAMILY SSF81296 1 98 2.24E-14 T 22-04-2016 IPR014756 Immunoglobulin E-set SMGD1_RS06170 0be48d0ed92155c541656fdddf6e6bf1 650 SUPERFAMILY SSF56281 103 518 2.23E-83 T 22-04-2016 IPR001279 Metallo-beta-lactamase SMGD1_RS06170 0be48d0ed92155c541656fdddf6e6bf1 650 PIRSF PIRSF004803 94 650 5.9E-223 T 22-04-2016 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 SMGD1_RS06170 0be48d0ed92155c541656fdddf6e6bf1 650 ProSitePatterns PS01292 Uncharacterized protein family UPF0036 signature. 459 487 - T 22-04-2016 IPR001587 Ribonuclease J, conserved site SMGD1_RS06170 0be48d0ed92155c541656fdddf6e6bf1 650 PANTHER PTHR11203 95 648 8.0E-183 T 22-04-2016 SMGD1_RS06170 0be48d0ed92155c541656fdddf6e6bf1 650 Pfam PF00753 Metallo-beta-lactamase superfamily 112 263 6.8E-15 T 22-04-2016 IPR001279 Metallo-beta-lactamase SMGD1_RS06170 0be48d0ed92155c541656fdddf6e6bf1 650 TIGRFAM TIGR00649 MG423: beta-CASP ribonuclease, RNase J family 103 647 5.0E-189 T 22-04-2016 IPR004613 Ribonuclease J GO:0003723|GO:0046872 SMGD1_RS06170 0be48d0ed92155c541656fdddf6e6bf1 650 Gene3D G3DSA:3.60.15.10 99 352 1.3E-75 T 22-04-2016 IPR001279 Metallo-beta-lactamase SMGD1_RS06170 0be48d0ed92155c541656fdddf6e6bf1 650 SMART SM00849 115 312 1.5E-21 T 22-04-2016 IPR001279 Metallo-beta-lactamase SMGD1_RS06170 0be48d0ed92155c541656fdddf6e6bf1 650 PANTHER PTHR11203:SF22 95 648 8.0E-183 T 22-04-2016 IPR004613 Ribonuclease J GO:0003723|GO:0046872 SMGD1_RS06170 0be48d0ed92155c541656fdddf6e6bf1 650 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 457 498 6.3E-8 T 22-04-2016 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain SMGD1_RS06170 0be48d0ed92155c541656fdddf6e6bf1 650 Hamap MF_01491 Ribonuclease J [rnj]. 98 650 39.924 T 22-04-2016 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 SMGD1_RS08760 c9e54bc6d88c208d1024fc87b186e658 94 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SMGD1_RS08760 c9e54bc6d88c208d1024fc87b186e658 94 SUPERFAMILY SSF54862 3 69 6.65E-16 T 22-04-2016 SMGD1_RS08760 c9e54bc6d88c208d1024fc87b186e658 94 Gene3D G3DSA:3.30.70.20 3 71 4.0E-15 T 22-04-2016 SMGD1_RS08760 c9e54bc6d88c208d1024fc87b186e658 94 Pfam PF12838 4Fe-4S dicluster domain 8 62 7.8E-8 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SMGD1_RS10580 51069c58bc4b67a120ef04de4dfd99c9 195 Gene3D G3DSA:3.30.1330.60 90 194 1.8E-29 T 22-04-2016 IPR006665 OmpA-like domain SMGD1_RS10580 51069c58bc4b67a120ef04de4dfd99c9 195 Pfam PF00691 OmpA family 93 188 2.2E-20 T 22-04-2016 IPR006665 OmpA-like domain SMGD1_RS10580 51069c58bc4b67a120ef04de4dfd99c9 195 PRINTS PR01021 OMPA domain signature 139 155 6.24E-11 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SMGD1_RS10580 51069c58bc4b67a120ef04de4dfd99c9 195 PRINTS PR01021 OMPA domain signature 124 139 6.24E-11 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SMGD1_RS10580 51069c58bc4b67a120ef04de4dfd99c9 195 PRINTS PR01021 OMPA domain signature 94 116 6.24E-11 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SMGD1_RS10580 51069c58bc4b67a120ef04de4dfd99c9 195 PANTHER PTHR30128 82 194 2.1E-25 T 22-04-2016 SMGD1_RS10580 51069c58bc4b67a120ef04de4dfd99c9 195 SUPERFAMILY SSF103088 86 194 1.31E-28 T 22-04-2016 IPR006665 OmpA-like domain SMGD1_RS11160 0007999d703bfe22b6fc4206c5c3d37f 408 SUPERFAMILY SSF56954 17 402 7.72E-44 T 22-04-2016 SMGD1_RS11160 0007999d703bfe22b6fc4206c5c3d37f 408 Gene3D G3DSA:1.20.1600.10 12 401 4.9E-34 T 22-04-2016 SMGD1_RS11160 0007999d703bfe22b6fc4206c5c3d37f 408 Pfam PF02321 Outer membrane efflux protein 21 188 3.0E-13 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SMGD1_RS11160 0007999d703bfe22b6fc4206c5c3d37f 408 Pfam PF02321 Outer membrane efflux protein 243 400 1.9E-11 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SMGD1_RS11160 0007999d703bfe22b6fc4206c5c3d37f 408 PANTHER PTHR30026:SF4 4 406 1.2E-19 T 22-04-2016 SMGD1_RS11160 0007999d703bfe22b6fc4206c5c3d37f 408 PANTHER PTHR30026 4 406 1.2E-19 T 22-04-2016 SMGD1_RS09880 2cee02bb0ae2ca5251ffc18b290ea381 336 PANTHER PTHR30160:SF7 3 331 7.0E-32 T 22-04-2016 SMGD1_RS09880 2cee02bb0ae2ca5251ffc18b290ea381 336 PANTHER PTHR30160 3 331 7.0E-32 T 22-04-2016 SMGD1_RS09880 2cee02bb0ae2ca5251ffc18b290ea381 336 Gene3D G3DSA:3.40.50.2000 6 113 1.8E-11 T 22-04-2016 SMGD1_RS09880 2cee02bb0ae2ca5251ffc18b290ea381 336 Gene3D G3DSA:3.40.50.2000 156 332 6.3E-40 T 22-04-2016 SMGD1_RS09880 2cee02bb0ae2ca5251ffc18b290ea381 336 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 159 307 2.9E-19 T 22-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 SMGD1_RS09880 2cee02bb0ae2ca5251ffc18b290ea381 336 SUPERFAMILY SSF53756 4 331 5.96E-50 T 22-04-2016 SMGD1_RS09795 a245aea6840c6ca10f7519778b8b0860 637 PANTHER PTHR10342:SF236 268 602 1.3E-42 T 22-04-2016 SMGD1_RS09795 a245aea6840c6ca10f7519778b8b0860 637 PANTHER PTHR10342 268 602 1.3E-42 T 22-04-2016 SMGD1_RS09795 a245aea6840c6ca10f7519778b8b0860 637 Pfam PF00884 Sulfatase 268 556 3.5E-34 T 22-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 SMGD1_RS09795 a245aea6840c6ca10f7519778b8b0860 637 SUPERFAMILY SSF53649 266 615 3.14E-52 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 SMGD1_RS09795 a245aea6840c6ca10f7519778b8b0860 637 PIRSF PIRSF005091 3 621 2.1E-65 T 22-04-2016 IPR012160 Lipoteichoic acid synthase-like KEGG: 00440+2.7.8.-|KEGG: 00513+2.7.8.-|KEGG: 00540+2.7.8.-|KEGG: 00564+2.7.8.-|KEGG: 00600+2.7.8.-|KEGG: 00770+2.7.8.-|UniPathway: UPA00556 SMGD1_RS09795 a245aea6840c6ca10f7519778b8b0860 637 Gene3D G3DSA:3.40.720.10 268 569 5.5E-38 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 SMGD1_RS12770 cddc45f6a72c19e44e215577267816f9 403 SUPERFAMILY SSF51261 216 372 6.28E-28 T 22-04-2016 IPR011055 Duplicated hybrid motif SMGD1_RS12770 cddc45f6a72c19e44e215577267816f9 403 PANTHER PTHR21666 273 369 2.9E-21 T 22-04-2016 SMGD1_RS12770 cddc45f6a72c19e44e215577267816f9 403 Pfam PF01551 Peptidase family M23 272 373 5.8E-23 T 22-04-2016 IPR016047 Peptidase M23 SMGD1_RS12770 cddc45f6a72c19e44e215577267816f9 403 Gene3D G3DSA:2.70.70.10 239 372 3.9E-30 T 22-04-2016 SMGD1_RS03415 2685a75b66efbbf122e596403619d50a 171 PANTHER PTHR11102 28 163 8.4E-28 T 22-04-2016 SMGD1_RS03415 2685a75b66efbbf122e596403619d50a 171 Pfam PF08238 Sel1 repeat 89 120 2.4E-5 T 22-04-2016 IPR006597 Sel1-like repeat SMGD1_RS03415 2685a75b66efbbf122e596403619d50a 171 Pfam PF08238 Sel1 repeat 122 156 4.0E-6 T 22-04-2016 IPR006597 Sel1-like repeat SMGD1_RS03415 2685a75b66efbbf122e596403619d50a 171 Pfam PF08238 Sel1 repeat 51 84 1.4E-6 T 22-04-2016 IPR006597 Sel1-like repeat SMGD1_RS03415 2685a75b66efbbf122e596403619d50a 171 SMART SM00671 121 156 2.0E-7 T 22-04-2016 IPR006597 Sel1-like repeat SMGD1_RS03415 2685a75b66efbbf122e596403619d50a 171 SMART SM00671 85 120 6.5E-7 T 22-04-2016 IPR006597 Sel1-like repeat SMGD1_RS03415 2685a75b66efbbf122e596403619d50a 171 SMART SM00671 49 84 8.7E-9 T 22-04-2016 IPR006597 Sel1-like repeat SMGD1_RS03415 2685a75b66efbbf122e596403619d50a 171 SUPERFAMILY SSF81901 27 162 2.75E-33 T 22-04-2016 SMGD1_RS03415 2685a75b66efbbf122e596403619d50a 171 Gene3D G3DSA:1.25.40.10 27 164 9.8E-39 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS10510 b2bc98cb8dc9c1b4804d3982775092a8 276 Gene3D G3DSA:3.40.50.150 76 274 7.3E-63 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS10510 b2bc98cb8dc9c1b4804d3982775092a8 276 PIRSF PIRSF000410 2 276 1.6E-88 T 22-04-2016 IPR026024 Chemotaxis protein methyltransferase CheR SMGD1_RS10510 b2bc98cb8dc9c1b4804d3982775092a8 276 Pfam PF01739 CheR methyltransferase, SAM binding domain 77 268 9.9E-59 T 22-04-2016 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal SMGD1_RS10510 b2bc98cb8dc9c1b4804d3982775092a8 276 Gene3D G3DSA:1.10.155.10 4 75 4.7E-17 T 22-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal SMGD1_RS10510 b2bc98cb8dc9c1b4804d3982775092a8 276 SMART SM00138 9 276 4.0E-83 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SMGD1_RS10510 b2bc98cb8dc9c1b4804d3982775092a8 276 PRINTS PR00996 Glutamate methyltransferase family signature 70 82 1.4E-40 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SMGD1_RS10510 b2bc98cb8dc9c1b4804d3982775092a8 276 PRINTS PR00996 Glutamate methyltransferase family signature 235 258 1.4E-40 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SMGD1_RS10510 b2bc98cb8dc9c1b4804d3982775092a8 276 PRINTS PR00996 Glutamate methyltransferase family signature 216 230 1.4E-40 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SMGD1_RS10510 b2bc98cb8dc9c1b4804d3982775092a8 276 PRINTS PR00996 Glutamate methyltransferase family signature 31 44 1.4E-40 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SMGD1_RS10510 b2bc98cb8dc9c1b4804d3982775092a8 276 PRINTS PR00996 Glutamate methyltransferase family signature 142 158 1.4E-40 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SMGD1_RS10510 b2bc98cb8dc9c1b4804d3982775092a8 276 PRINTS PR00996 Glutamate methyltransferase family signature 107 127 1.4E-40 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SMGD1_RS10510 b2bc98cb8dc9c1b4804d3982775092a8 276 Pfam PF03705 CheR methyltransferase, all-alpha domain 12 61 4.9E-13 T 22-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal SMGD1_RS10510 b2bc98cb8dc9c1b4804d3982775092a8 276 PANTHER PTHR24422 12 275 4.3E-66 T 22-04-2016 SMGD1_RS10510 b2bc98cb8dc9c1b4804d3982775092a8 276 SUPERFAMILY SSF47757 6 76 1.44E-14 T 22-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal SMGD1_RS10510 b2bc98cb8dc9c1b4804d3982775092a8 276 SUPERFAMILY SSF53335 77 273 5.63E-47 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS05315 e05169b6f6ef1619c34eba6c0ee1eaf6 384 PANTHER PTHR32468:SF9 1 375 3.1E-27 T 22-04-2016 SMGD1_RS05315 e05169b6f6ef1619c34eba6c0ee1eaf6 384 PANTHER PTHR32468 1 375 3.1E-27 T 22-04-2016 SMGD1_RS05315 e05169b6f6ef1619c34eba6c0ee1eaf6 384 Pfam PF00999 Sodium/hydrogen exchanger family 8 366 2.2E-33 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 SMGD1_RS07170 183f7bbf17066cca074bf09369f7c12c 335 PANTHER PTHR30154 162 335 1.1E-39 T 22-04-2016 SMGD1_RS07170 183f7bbf17066cca074bf09369f7c12c 335 PANTHER PTHR30154:SF27 162 335 1.1E-39 T 22-04-2016 SMGD1_RS07190 96cc39c2d049d1e56b10cf44ad17d6d4 235 PIRSF PIRSF006232 1 232 7.8E-53 T 22-04-2016 IPR012093 Pirin SMGD1_RS07190 96cc39c2d049d1e56b10cf44ad17d6d4 235 SUPERFAMILY SSF51182 4 233 4.62E-69 T 22-04-2016 IPR011051 RmlC-like cupin domain SMGD1_RS07190 96cc39c2d049d1e56b10cf44ad17d6d4 235 PANTHER PTHR13903:SF7 5 234 4.7E-90 T 22-04-2016 SMGD1_RS07190 96cc39c2d049d1e56b10cf44ad17d6d4 235 Pfam PF02678 Pirin 9 120 1.7E-33 T 22-04-2016 IPR003829 Pirin, N-terminal domain SMGD1_RS07190 96cc39c2d049d1e56b10cf44ad17d6d4 235 Gene3D G3DSA:2.60.120.10 4 233 1.5E-65 T 22-04-2016 IPR014710 RmlC-like jelly roll fold SMGD1_RS07190 96cc39c2d049d1e56b10cf44ad17d6d4 235 PANTHER PTHR13903 5 234 4.7E-90 T 22-04-2016 IPR012093 Pirin SMGD1_RS12185 24ab4ce55f6d8961d566845f6a3b4856 403 Pfam PF02321 Outer membrane efflux protein 61 173 2.6E-10 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SMGD1_RS12185 24ab4ce55f6d8961d566845f6a3b4856 403 Pfam PF02321 Outer membrane efflux protein 220 393 5.5E-17 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SMGD1_RS12185 24ab4ce55f6d8961d566845f6a3b4856 403 SUPERFAMILY SSF56954 60 389 4.05E-29 T 22-04-2016 SMGD1_RS12185 24ab4ce55f6d8961d566845f6a3b4856 403 Gene3D G3DSA:1.20.1600.10 220 373 3.8E-13 T 22-04-2016 SMGD1_RS12185 24ab4ce55f6d8961d566845f6a3b4856 403 Gene3D G3DSA:1.20.1600.10 57 166 1.2E-7 T 22-04-2016 SMGD1_RS08080 7fa005ef284abb733565c379116c276e 298 PIRSF PIRSF028756 8 291 8.1E-93 T 22-04-2016 IPR016898 Polyphosphate kinase 2 SMGD1_RS08080 7fa005ef284abb733565c379116c276e 298 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 43 266 2.1E-94 T 22-04-2016 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 SMGD1_RS08080 7fa005ef284abb733565c379116c276e 298 PANTHER PTHR34383 45 261 6.4E-95 T 22-04-2016 SMGD1_RS08080 7fa005ef284abb733565c379116c276e 298 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 41 264 6.8E-86 T 22-04-2016 IPR022488 Polyphosphate kinase-2-related SMGD1_RS08080 7fa005ef284abb733565c379116c276e 298 PANTHER PTHR34383:SF1 45 261 6.4E-95 T 22-04-2016 SMGD1_RS08080 7fa005ef284abb733565c379116c276e 298 SUPERFAMILY SSF52540 69 246 1.52E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS08080 7fa005ef284abb733565c379116c276e 298 Gene3D G3DSA:3.40.50.300 23 266 1.2E-87 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS03550 1423cbe9a97f82ab956dc39928ff8f8a 685 SUPERFAMILY SSF55874 284 457 9.43E-41 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS03550 1423cbe9a97f82ab956dc39928ff8f8a 685 SMART SM00387 342 459 2.6E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS03550 1423cbe9a97f82ab956dc39928ff8f8a 685 Pfam PF00512 His Kinase A (phospho-acceptor) domain 230 295 1.0E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS03550 1423cbe9a97f82ab956dc39928ff8f8a 685 SMART SM00388 230 295 5.2E-23 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS03550 1423cbe9a97f82ab956dc39928ff8f8a 685 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 437 1.0E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS03550 1423cbe9a97f82ab956dc39928ff8f8a 685 PRINTS PR00344 Bacterial sensor protein C-terminal signature 402 412 1.0E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS03550 1423cbe9a97f82ab956dc39928ff8f8a 685 PRINTS PR00344 Bacterial sensor protein C-terminal signature 443 456 1.0E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS03550 1423cbe9a97f82ab956dc39928ff8f8a 685 PRINTS PR00344 Bacterial sensor protein C-terminal signature 384 398 1.0E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS03550 1423cbe9a97f82ab956dc39928ff8f8a 685 SUPERFAMILY SSF52172 478 595 4.7E-29 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS03550 1423cbe9a97f82ab956dc39928ff8f8a 685 Gene3D G3DSA:3.40.50.2300 474 595 5.9E-29 T 22-04-2016 SMGD1_RS03550 1423cbe9a97f82ab956dc39928ff8f8a 685 Gene3D G3DSA:1.10.287.130 223 291 8.1E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS03550 1423cbe9a97f82ab956dc39928ff8f8a 685 Pfam PF00072 Response regulator receiver domain 482 587 7.4E-20 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS03550 1423cbe9a97f82ab956dc39928ff8f8a 685 PANTHER PTHR24423:SF382 211 631 1.5E-119 T 22-04-2016 SMGD1_RS03550 1423cbe9a97f82ab956dc39928ff8f8a 685 SMART SM00448 480 589 2.2E-21 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS03550 1423cbe9a97f82ab956dc39928ff8f8a 685 PANTHER PTHR24423 211 631 1.5E-119 T 22-04-2016 SMGD1_RS03550 1423cbe9a97f82ab956dc39928ff8f8a 685 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 343 456 3.1E-26 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS03550 1423cbe9a97f82ab956dc39928ff8f8a 685 Gene3D G3DSA:3.30.565.10 304 456 1.1E-40 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS03550 1423cbe9a97f82ab956dc39928ff8f8a 685 SUPERFAMILY SSF47384 215 296 9.42E-22 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS03840 ffac5d45991229e4c95606e6a329e1f6 76 Gene3D G3DSA:3.30.1320.10 4 74 5.2E-29 T 22-04-2016 IPR023803 Ribosomal protein S16 domain SMGD1_RS03840 ffac5d45991229e4c95606e6a329e1f6 76 Pfam PF00886 Ribosomal protein S16 9 67 5.5E-24 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS03840 ffac5d45991229e4c95606e6a329e1f6 76 PANTHER PTHR12919 2 73 5.1E-32 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS03840 ffac5d45991229e4c95606e6a329e1f6 76 TIGRFAM TIGR00002 S16: ribosomal protein bS16 5 73 2.8E-28 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS03840 ffac5d45991229e4c95606e6a329e1f6 76 SUPERFAMILY SSF54565 3 73 4.32E-28 T 22-04-2016 IPR023803 Ribosomal protein S16 domain SMGD1_RS03840 ffac5d45991229e4c95606e6a329e1f6 76 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 2 76 20.163 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS03840 ffac5d45991229e4c95606e6a329e1f6 76 ProSitePatterns PS00732 Ribosomal protein S16 signature. 3 12 - T 22-04-2016 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS05090 451c1c4a9127d2146149fb3b40072599 395 Gene3D G3DSA:1.20.272.10 224 317 9.6E-42 T 22-04-2016 SMGD1_RS05090 451c1c4a9127d2146149fb3b40072599 395 Gene3D G3DSA:1.10.8.60 149 204 5.6E-8 T 22-04-2016 SMGD1_RS05090 451c1c4a9127d2146149fb3b40072599 395 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 42 140 4.0E-18 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SMGD1_RS05090 451c1c4a9127d2146149fb3b40072599 395 Gene3D G3DSA:3.40.50.300 3 147 2.5E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS05090 451c1c4a9127d2146149fb3b40072599 395 Pfam PF16193 AAA C-terminal domain 166 237 3.1E-14 T 22-04-2016 IPR032423 AAA ATPase, C-terminal domain SMGD1_RS05090 451c1c4a9127d2146149fb3b40072599 395 SUPERFAMILY SSF52540 2 198 1.46E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS05090 451c1c4a9127d2146149fb3b40072599 395 SMART SM00382 36 148 5.2E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain SMGD1_RS05090 451c1c4a9127d2146149fb3b40072599 395 SUPERFAMILY SSF48019 225 392 9.07E-57 T 22-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 SMGD1_RS05090 451c1c4a9127d2146149fb3b40072599 395 PANTHER PTHR13779 6 389 4.5E-115 T 22-04-2016 SMGD1_RS05090 451c1c4a9127d2146149fb3b40072599 395 Gene3D G3DSA:1.10.3710.10 319 383 2.8E-13 T 22-04-2016 SMGD1_RS05090 451c1c4a9127d2146149fb3b40072599 395 PANTHER PTHR13779:SF32 6 389 4.5E-115 T 22-04-2016 SMGD1_RS05090 451c1c4a9127d2146149fb3b40072599 395 Pfam PF12002 MgsA AAA+ ATPase C terminal 238 389 2.3E-51 T 22-04-2016 IPR021886 MgsA AAA+ ATPase C-terminal SMGD1_RS12615 3d87424cb6298b6ef36430c432a74ad1 91 Pfam PF11342 Protein of unknown function (DUF3144) 8 85 1.1E-28 T 22-04-2016 IPR021490 Protein of unknown function DUF3144 SMGD1_RS08245 f1d44c4adbb77e20b489c79537c530c6 293 Gene3D G3DSA:1.20.58.180 210 285 1.3E-28 T 22-04-2016 SMGD1_RS08245 f1d44c4adbb77e20b489c79537c530c6 293 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 4 283 1.6E-139 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SMGD1_RS08245 f1d44c4adbb77e20b489c79537c530c6 293 Gene3D G3DSA:3.30.930.10 1 208 4.9E-97 T 22-04-2016 SMGD1_RS08245 f1d44c4adbb77e20b489c79537c530c6 293 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 2 286 56.953 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SMGD1_RS08245 f1d44c4adbb77e20b489c79537c530c6 293 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 56 71 2.1E-66 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SMGD1_RS08245 f1d44c4adbb77e20b489c79537c530c6 293 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 108 132 2.1E-66 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SMGD1_RS08245 f1d44c4adbb77e20b489c79537c530c6 293 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 134 154 2.1E-66 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SMGD1_RS08245 f1d44c4adbb77e20b489c79537c530c6 293 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 77 97 2.1E-66 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SMGD1_RS08245 f1d44c4adbb77e20b489c79537c530c6 293 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 157 172 2.1E-66 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SMGD1_RS08245 f1d44c4adbb77e20b489c79537c530c6 293 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 246 262 2.1E-66 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SMGD1_RS08245 f1d44c4adbb77e20b489c79537c530c6 293 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 3 290 1.6E-152 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SMGD1_RS08245 f1d44c4adbb77e20b489c79537c530c6 293 SUPERFAMILY SSF55681 3 283 7.62E-123 T 22-04-2016 SMGD1_RS08245 f1d44c4adbb77e20b489c79537c530c6 293 PANTHER PTHR30075 2 280 2.0E-192 T 22-04-2016 SMGD1_RS14355 3e657db69b2c0e65ef11f92dc1586c55 600 SMART SM00283 240 504 2.2E-38 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SMGD1_RS14355 3e657db69b2c0e65ef11f92dc1586c55 600 SUPERFAMILY SSF58104 202 507 1.19E-58 T 22-04-2016 SMGD1_RS14355 3e657db69b2c0e65ef11f92dc1586c55 600 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 148 168 1.5E-6 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SMGD1_RS14355 3e657db69b2c0e65ef11f92dc1586c55 600 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 370 399 1.5E-6 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SMGD1_RS14355 3e657db69b2c0e65ef11f92dc1586c55 600 PANTHER PTHR32089 129 433 2.6E-58 T 22-04-2016 SMGD1_RS14355 3e657db69b2c0e65ef11f92dc1586c55 600 Gene3D G3DSA:1.10.287.950 258 470 1.9E-47 T 22-04-2016 SMGD1_RS14355 3e657db69b2c0e65ef11f92dc1586c55 600 Pfam PF11845 Protein of unknown function (DUF3365) 31 116 1.6E-10 T 22-04-2016 IPR021796 Protein of unknown function DUF3365 SMGD1_RS14355 3e657db69b2c0e65ef11f92dc1586c55 600 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 308 503 1.2E-38 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SMGD1_RS05370 fd91934f554e0349c3d57d7ce0dfe293 207 Pfam PF14681 Uracil phosphoribosyltransferase 6 205 5.3E-57 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SMGD1_RS05370 fd91934f554e0349c3d57d7ce0dfe293 207 Gene3D G3DSA:3.40.50.2020 2 205 6.6E-64 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SMGD1_RS05370 fd91934f554e0349c3d57d7ce0dfe293 207 PANTHER PTHR10285 6 195 2.4E-63 T 22-04-2016 SMGD1_RS05370 fd91934f554e0349c3d57d7ce0dfe293 207 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 1 205 2.7E-71 T 22-04-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183|UniPathway: UPA00574 SMGD1_RS05370 fd91934f554e0349c3d57d7ce0dfe293 207 PANTHER PTHR10285:SF46 6 195 2.4E-63 T 22-04-2016 SMGD1_RS05370 fd91934f554e0349c3d57d7ce0dfe293 207 SUPERFAMILY SSF53271 2 204 1.17E-58 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SMGD1_RS04380 08c015e1a47cc6efb3f86ce73bee4eb4 161 SUPERFAMILY SSF54523 6 119 5.49E-15 T 22-04-2016 SMGD1_RS04380 08c015e1a47cc6efb3f86ce73bee4eb4 161 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 3 26 3.5E-7 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site SMGD1_RS04380 08c015e1a47cc6efb3f86ce73bee4eb4 161 Pfam PF13633 Prokaryotic N-terminal methylation site 4 28 9.7E-6 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site SMGD1_RS04380 08c015e1a47cc6efb3f86ce73bee4eb4 161 Gene3D G3DSA:3.30.700.10 6 89 1.5E-10 T 22-04-2016 SMGD1_RS08250 183b5d7d5e4132722d7b84232a0ce795 745 PANTHER PTHR10887 673 728 2.2E-46 T 22-04-2016 SMGD1_RS08250 183b5d7d5e4132722d7b84232a0ce795 745 PANTHER PTHR10887 309 589 2.2E-46 T 22-04-2016 SMGD1_RS08250 183b5d7d5e4132722d7b84232a0ce795 745 Gene3D G3DSA:3.40.50.300 297 486 3.2E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS08250 183b5d7d5e4132722d7b84232a0ce795 745 SUPERFAMILY SSF52540 418 483 1.77E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS08250 183b5d7d5e4132722d7b84232a0ce795 745 SUPERFAMILY SSF52540 554 733 1.77E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS08250 183b5d7d5e4132722d7b84232a0ce795 745 PANTHER PTHR10887:SF284 109 136 2.2E-46 T 22-04-2016 SMGD1_RS08250 183b5d7d5e4132722d7b84232a0ce795 745 PANTHER PTHR10887 109 136 2.2E-46 T 22-04-2016 SMGD1_RS08250 183b5d7d5e4132722d7b84232a0ce795 745 PANTHER PTHR10887:SF284 673 728 2.2E-46 T 22-04-2016 SMGD1_RS08250 183b5d7d5e4132722d7b84232a0ce795 745 PANTHER PTHR10887:SF284 309 589 2.2E-46 T 22-04-2016 SMGD1_RS08250 183b5d7d5e4132722d7b84232a0ce795 745 Pfam PF14490 Helix-hairpin-helix containing domain 135 226 1.8E-19 T 22-04-2016 IPR029493 RecD helicase-like helix-hairpin-helix domain SMGD1_RS08250 183b5d7d5e4132722d7b84232a0ce795 745 Gene3D G3DSA:3.40.50.300 676 723 1.8E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS08250 183b5d7d5e4132722d7b84232a0ce795 745 Pfam PF13538 UvrD-like helicase C-terminal domain 673 720 8.3E-16 T 22-04-2016 IPR027785 UvrD-like helicase C-terminal domain SMGD1_RS08250 183b5d7d5e4132722d7b84232a0ce795 745 SMART SM00382 326 456 0.01 T 22-04-2016 IPR003593 AAA+ ATPase domain SMGD1_RS08250 183b5d7d5e4132722d7b84232a0ce795 745 SUPERFAMILY SSF52540 178 465 6.76E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS08250 183b5d7d5e4132722d7b84232a0ce795 745 Pfam PF13604 AAA domain 312 498 2.6E-38 T 22-04-2016 SMGD1_RS02685 1885ab43eac5a68d56693e8ff0c0ac18 368 Hamap MF_02040 Iron-sulfur cluster carrier protein. 89 338 36.069 T 22-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein SMGD1_RS02685 1885ab43eac5a68d56693e8ff0c0ac18 368 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 94 337 1.1E-94 T 22-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein SMGD1_RS02685 1885ab43eac5a68d56693e8ff0c0ac18 368 SUPERFAMILY SSF52540 87 322 8.75E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS02685 1885ab43eac5a68d56693e8ff0c0ac18 368 PANTHER PTHR23264:SF19 1 365 2.1E-132 T 22-04-2016 SMGD1_RS02685 1885ab43eac5a68d56693e8ff0c0ac18 368 SUPERFAMILY SSF117916 2 81 5.23E-13 T 22-04-2016 SMGD1_RS02685 1885ab43eac5a68d56693e8ff0c0ac18 368 Gene3D G3DSA:3.40.50.300 89 336 1.2E-94 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS02685 1885ab43eac5a68d56693e8ff0c0ac18 368 PANTHER PTHR23264 1 365 2.1E-132 T 22-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein SMGD1_RS02685 1885ab43eac5a68d56693e8ff0c0ac18 368 ProSitePatterns PS01215 Mrp family signature. 201 217 - T 22-04-2016 IPR000808 Mrp, conserved site GO:0005524 SMGD1_RS02685 1885ab43eac5a68d56693e8ff0c0ac18 368 Pfam PF01883 Domain of unknown function DUF59 6 68 2.3E-9 T 22-04-2016 IPR002744 Domain of unknown function DUF59 SMGD1_RS12940 3383a1d8343a0b640205e53410802259 187 SUPERFAMILY SSF51391 2 171 9.42E-27 T 22-04-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 SMGD1_RS12940 3383a1d8343a0b640205e53410802259 187 Pfam PF02581 Thiamine monophosphate synthase/TENI 3 171 5.1E-23 T 22-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 SMGD1_RS12940 3383a1d8343a0b640205e53410802259 187 Gene3D G3DSA:3.20.20.70 1 171 3.2E-31 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMGD1_RS12940 3383a1d8343a0b640205e53410802259 187 PANTHER PTHR20857 1 171 4.1E-17 T 22-04-2016 SMGD1_RS12940 3383a1d8343a0b640205e53410802259 187 PANTHER PTHR20857:SF15 1 171 4.1E-17 T 22-04-2016 SMGD1_RS09300 accfa26c3a4ffc720d1718e42da4fc2c 207 PANTHER PTHR10000 3 204 1.8E-56 T 22-04-2016 SMGD1_RS09300 accfa26c3a4ffc720d1718e42da4fc2c 207 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 4 174 7.7E-26 T 22-04-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 SMGD1_RS09300 accfa26c3a4ffc720d1718e42da4fc2c 207 Gene3D G3DSA:1.10.150.210 19 77 3.0E-22 T 22-04-2016 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|UniPathway: UPA00135 SMGD1_RS09300 accfa26c3a4ffc720d1718e42da4fc2c 207 Gene3D G3DSA:3.40.50.1000 5 18 5.4E-30 T 22-04-2016 IPR023214 HAD-like domain SMGD1_RS09300 accfa26c3a4ffc720d1718e42da4fc2c 207 Gene3D G3DSA:3.40.50.1000 78 204 5.4E-30 T 22-04-2016 IPR023214 HAD-like domain SMGD1_RS09300 accfa26c3a4ffc720d1718e42da4fc2c 207 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 3 205 2.2E-70 T 22-04-2016 SMGD1_RS09300 accfa26c3a4ffc720d1718e42da4fc2c 207 PANTHER PTHR10000:SF7 3 204 1.8E-56 T 22-04-2016 SMGD1_RS09300 accfa26c3a4ffc720d1718e42da4fc2c 207 SUPERFAMILY SSF56784 2 205 1.11E-47 T 22-04-2016 IPR023214 HAD-like domain SMGD1_RS09300 accfa26c3a4ffc720d1718e42da4fc2c 207 Pfam PF00702 haloacid dehalogenase-like hydrolase 3 176 6.8E-19 T 22-04-2016 SMGD1_RS13800 029c168bf2b334b904290db6864d4f0b 269 Pfam PF00717 Peptidase S24-like 34 124 1.2E-15 T 22-04-2016 IPR019759 Peptidase S24/S26A/S26B SMGD1_RS13800 029c168bf2b334b904290db6864d4f0b 269 PANTHER PTHR12383:SF27 169 265 2.7E-48 T 22-04-2016 SMGD1_RS13800 029c168bf2b334b904290db6864d4f0b 269 PANTHER PTHR12383:SF27 83 137 2.7E-48 T 22-04-2016 SMGD1_RS13800 029c168bf2b334b904290db6864d4f0b 269 PANTHER PTHR12383:SF27 19 60 2.7E-48 T 22-04-2016 SMGD1_RS13800 029c168bf2b334b904290db6864d4f0b 269 ProSitePatterns PS00761 Signal peptidases I signature 3. 192 205 - T 22-04-2016 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 SMGD1_RS13800 029c168bf2b334b904290db6864d4f0b 269 SUPERFAMILY SSF51306 27 240 3.14E-55 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C SMGD1_RS13800 029c168bf2b334b904290db6864d4f0b 269 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 104 116 1.1E-16 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SMGD1_RS13800 029c168bf2b334b904290db6864d4f0b 269 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 28 44 1.1E-16 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SMGD1_RS13800 029c168bf2b334b904290db6864d4f0b 269 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 187 206 1.1E-16 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SMGD1_RS13800 029c168bf2b334b904290db6864d4f0b 269 Gene3D G3DSA:2.10.109.10 25 114 1.9E-46 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain SMGD1_RS13800 029c168bf2b334b904290db6864d4f0b 269 Gene3D G3DSA:2.10.109.10 187 234 1.9E-46 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain SMGD1_RS13800 029c168bf2b334b904290db6864d4f0b 269 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 17 227 4.0E-39 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SMGD1_RS13800 029c168bf2b334b904290db6864d4f0b 269 PANTHER PTHR12383 169 265 2.7E-48 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SMGD1_RS13800 029c168bf2b334b904290db6864d4f0b 269 PANTHER PTHR12383 83 137 2.7E-48 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SMGD1_RS13800 029c168bf2b334b904290db6864d4f0b 269 PANTHER PTHR12383 19 60 2.7E-48 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SMGD1_RS10765 e917584df3e6bf7148bcfa6cd17dd919 321 Pfam PF02169 LPP20 lipoprotein 23 118 1.3E-13 T 22-04-2016 IPR024952 Lipoprotein LPP20-like SMGD1_RS05425 c3ee4f5e8ceee4521425179df9c034bd 205 Pfam PF04509 CheC-like family 109 136 2.1E-4 T 22-04-2016 IPR007597 CheC-like protein GO:0016787 SMGD1_RS05425 c3ee4f5e8ceee4521425179df9c034bd 205 SUPERFAMILY SSF103039 5 197 2.35E-30 T 22-04-2016 IPR028976 CheC-like domain SMGD1_RS05425 c3ee4f5e8ceee4521425179df9c034bd 205 Gene3D G3DSA:3.40.1550.10 6 198 1.5E-32 T 22-04-2016 IPR028976 CheC-like domain SMGD1_RS01600 075e8ce989f20cb45cd220bc6e694322 62 Pfam PF02609 Exonuclease VII small subunit 7 57 6.0E-10 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 SMGD1_RS01600 075e8ce989f20cb45cd220bc6e694322 62 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 6 59 3.2E-11 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 SMGD1_RS01600 075e8ce989f20cb45cd220bc6e694322 62 Gene3D G3DSA:1.10.287.1040 3 60 1.2E-9 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 SMGD1_RS01600 075e8ce989f20cb45cd220bc6e694322 62 SUPERFAMILY SSF116842 4 60 2.48E-10 T 22-04-2016 SMGD1_RS00145 ed90054953322ccad6a104ec8ace67d9 210 Gene3D G3DSA:1.10.10.10 147 200 6.4E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMGD1_RS00145 ed90054953322ccad6a104ec8ace67d9 210 PANTHER PTHR24567 1 200 3.2E-34 T 22-04-2016 SMGD1_RS00145 ed90054953322ccad6a104ec8ace67d9 210 SUPERFAMILY SSF51206 5 135 5.76E-33 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like SMGD1_RS00145 ed90054953322ccad6a104ec8ace67d9 210 Pfam PF00027 Cyclic nucleotide-binding domain 30 113 2.2E-17 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain SMGD1_RS00145 ed90054953322ccad6a104ec8ace67d9 210 Pfam PF13545 Crp-like helix-turn-helix domain 148 200 1.4E-6 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 SMGD1_RS00145 ed90054953322ccad6a104ec8ace67d9 210 SMART SM00100 10 128 1.7E-16 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain SMGD1_RS00145 ed90054953322ccad6a104ec8ace67d9 210 Gene3D G3DSA:2.60.120.10 5 135 3.8E-30 T 22-04-2016 IPR014710 RmlC-like jelly roll fold SMGD1_RS00145 ed90054953322ccad6a104ec8ace67d9 210 SUPERFAMILY SSF46785 146 209 1.84E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMGD1_RS00145 ed90054953322ccad6a104ec8ace67d9 210 PANTHER PTHR24567:SF30 1 200 3.2E-34 T 22-04-2016 SMGD1_RS00705 d4df2dec97da756c339fdbe76bcfbc99 395 Pfam PF01464 Transglycosylase SLT domain 227 349 3.0E-21 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 SMGD1_RS00705 d4df2dec97da756c339fdbe76bcfbc99 395 Pfam PF11873 Domain of unknown function (DUF3393) 5 128 2.1E-7 T 22-04-2016 IPR024570 Murein transglycosylase-C, N-terminal SMGD1_RS00705 d4df2dec97da756c339fdbe76bcfbc99 395 SUPERFAMILY SSF53955 214 344 6.19E-29 T 22-04-2016 IPR023346 Lysozyme-like domain SMGD1_RS00705 d4df2dec97da756c339fdbe76bcfbc99 395 SUPERFAMILY SSF53955 371 389 6.19E-29 T 22-04-2016 IPR023346 Lysozyme-like domain SMGD1_RS00705 d4df2dec97da756c339fdbe76bcfbc99 395 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 243 271 - T 22-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 SMGD1_RS00705 d4df2dec97da756c339fdbe76bcfbc99 395 PANTHER PTHR21666 205 393 3.8E-27 T 22-04-2016 SMGD1_RS00705 d4df2dec97da756c339fdbe76bcfbc99 395 Gene3D G3DSA:1.10.530.10 218 393 3.6E-32 T 22-04-2016 SMGD1_RS04610 32e4033989cf195ca7d8880b0872ce8c 390 Pfam PF00990 Diguanylate cyclase, GGDEF domain 226 381 9.2E-46 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS04610 32e4033989cf195ca7d8880b0872ce8c 390 PANTHER PTHR10799:SF774 113 385 6.6E-39 T 22-04-2016 SMGD1_RS04610 32e4033989cf195ca7d8880b0872ce8c 390 Gene3D G3DSA:3.30.70.270 227 389 2.8E-50 T 22-04-2016 SMGD1_RS04610 32e4033989cf195ca7d8880b0872ce8c 390 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 223 384 1.5E-44 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS04610 32e4033989cf195ca7d8880b0872ce8c 390 SUPERFAMILY SSF55073 231 388 1.67E-45 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS04610 32e4033989cf195ca7d8880b0872ce8c 390 PANTHER PTHR10799 113 385 6.6E-39 T 22-04-2016 SMGD1_RS04610 32e4033989cf195ca7d8880b0872ce8c 390 SMART SM00267 215 386 1.2E-60 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS14265 effd4c3b1abc099b4effb7d61cef9979 369 SUPERFAMILY SSF48695 16 98 1.23E-19 T 22-04-2016 IPR011031 Multihaem cytochrome SMGD1_RS14265 effd4c3b1abc099b4effb7d61cef9979 369 SUPERFAMILY SSF48695 160 210 1.23E-19 T 22-04-2016 IPR011031 Multihaem cytochrome SMGD1_RS14265 effd4c3b1abc099b4effb7d61cef9979 369 Pfam PF13435 Cytochrome c554 and c-prime 25 95 3.9E-5 T 22-04-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 SMGD1_RS14265 effd4c3b1abc099b4effb7d61cef9979 369 Gene3D G3DSA:1.10.780.10 162 205 4.2E-14 T 22-04-2016 SMGD1_RS14265 effd4c3b1abc099b4effb7d61cef9979 369 Gene3D G3DSA:1.10.780.10 19 116 4.2E-14 T 22-04-2016 SMGD1_RS10075 0152ffce323d86e5e0e3b52ebbfa8ffc 231 SUPERFAMILY SSF52172 1 117 1.42E-26 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS10075 0152ffce323d86e5e0e3b52ebbfa8ffc 231 SMART SM00448 1 113 6.8E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS10075 0152ffce323d86e5e0e3b52ebbfa8ffc 231 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 220 8.6E-10 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMGD1_RS10075 0152ffce323d86e5e0e3b52ebbfa8ffc 231 Pfam PF00072 Response regulator receiver domain 3 113 4.0E-21 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS10075 0152ffce323d86e5e0e3b52ebbfa8ffc 231 SMART SM00862 150 220 2.3E-8 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMGD1_RS10075 0152ffce323d86e5e0e3b52ebbfa8ffc 231 SUPERFAMILY SSF46894 131 220 9.07E-14 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SMGD1_RS10075 0152ffce323d86e5e0e3b52ebbfa8ffc 231 Gene3D G3DSA:1.10.10.10 129 221 7.3E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMGD1_RS10075 0152ffce323d86e5e0e3b52ebbfa8ffc 231 Gene3D G3DSA:3.40.50.2300 1 114 1.1E-25 T 22-04-2016 SMGD1_RS10075 0152ffce323d86e5e0e3b52ebbfa8ffc 231 PANTHER PTHR26402 1 205 7.7E-34 T 22-04-2016 SMGD1_RS06760 97576a6dddc5f80923324784a0bfca2e 441 Pfam PF05670 Domain of unknown function (DUF814) 341 420 9.2E-14 T 22-04-2016 IPR008532 Domain of unknown function DUF814 SMGD1_RS06760 97576a6dddc5f80923324784a0bfca2e 441 Pfam PF05833 Fibronectin-binding protein A N-terminus (FbpA) 18 156 6.3E-11 T 22-04-2016 SMGD1_RS06760 97576a6dddc5f80923324784a0bfca2e 441 Pfam PF05833 Fibronectin-binding protein A N-terminus (FbpA) 180 317 5.9E-13 T 22-04-2016 SMGD1_RS06760 97576a6dddc5f80923324784a0bfca2e 441 Gene3D G3DSA:2.30.310.10 17 152 3.6E-18 T 22-04-2016 SMGD1_RS01770 880122a14a809f04c5a44b5a140939f7 512 SUPERFAMILY SSF52091 409 494 3.14E-13 T 22-04-2016 IPR002645 STAS domain SMGD1_RS01770 880122a14a809f04c5a44b5a140939f7 512 Gene3D G3DSA:3.30.750.24 410 494 2.2E-12 T 22-04-2016 IPR002645 STAS domain SMGD1_RS01770 880122a14a809f04c5a44b5a140939f7 512 Pfam PF00916 Sulfate permease family 162 372 4.0E-27 T 22-04-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 SMGD1_RS01770 880122a14a809f04c5a44b5a140939f7 512 Pfam PF00916 Sulfate permease family 13 157 2.1E-23 T 22-04-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 SMGD1_RS01770 880122a14a809f04c5a44b5a140939f7 512 PANTHER PTHR11814:SF76 10 494 3.8E-144 T 22-04-2016 SMGD1_RS01770 880122a14a809f04c5a44b5a140939f7 512 Pfam PF01740 STAS domain 411 497 1.9E-9 T 22-04-2016 IPR002645 STAS domain SMGD1_RS01770 880122a14a809f04c5a44b5a140939f7 512 PANTHER PTHR11814 10 494 3.8E-144 T 22-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 SMGD1_RS04335 5181feb2dbad003a657074dc865cb186 482 SUPERFAMILY SSF52540 415 442 2.4E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS04335 5181feb2dbad003a657074dc865cb186 482 SUPERFAMILY SSF52540 175 386 2.4E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS04335 5181feb2dbad003a657074dc865cb186 482 Gene3D G3DSA:3.40.50.300 165 450 4.3E-93 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS04335 5181feb2dbad003a657074dc865cb186 482 PANTHER PTHR30153 411 459 1.1E-138 T 22-04-2016 SMGD1_RS04335 5181feb2dbad003a657074dc865cb186 482 PANTHER PTHR30153 6 390 1.1E-138 T 22-04-2016 SMGD1_RS04335 5181feb2dbad003a657074dc865cb186 482 SUPERFAMILY SSF48024 4 108 7.32E-21 T 22-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 SMGD1_RS04335 5181feb2dbad003a657074dc865cb186 482 Gene3D G3DSA:1.10.860.10 6 101 5.6E-16 T 22-04-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal SMGD1_RS04335 5181feb2dbad003a657074dc865cb186 482 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 6 451 1.2E-141 T 22-04-2016 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 SMGD1_RS04335 5181feb2dbad003a657074dc865cb186 482 Pfam PF03796 DnaB-like helicase C terminal domain 175 448 5.0E-100 T 22-04-2016 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 SMGD1_RS04335 5181feb2dbad003a657074dc865cb186 482 Pfam PF00772 DnaB-like helicase N terminal domain 5 100 2.9E-20 T 22-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 SMGD1_RS01890 fa784a7735dce5ba3add12a1b242863d 106 Pfam PF08447 PAS fold 4 83 2.5E-10 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 SMGD1_RS01890 fa784a7735dce5ba3add12a1b242863d 106 PANTHER PTHR32089 18 104 2.4E-17 T 22-04-2016 SMGD1_RS01890 fa784a7735dce5ba3add12a1b242863d 106 PANTHER PTHR32089:SF52 18 104 2.4E-17 T 22-04-2016 SMGD1_RS01890 fa784a7735dce5ba3add12a1b242863d 106 Gene3D G3DSA:3.30.450.20 2 84 4.9E-13 T 22-04-2016 SMGD1_RS01890 fa784a7735dce5ba3add12a1b242863d 106 SUPERFAMILY SSF55785 2 85 9.95E-18 T 22-04-2016 IPR000014 PAS domain SMGD1_RS06695 d453083d1e7cea0089918b4d24f7efae 331 Pfam PF00155 Aminotransferase class I and II 22 323 6.2E-21 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SMGD1_RS06695 d453083d1e7cea0089918b4d24f7efae 331 Gene3D G3DSA:3.90.1150.10 234 330 8.5E-22 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SMGD1_RS06695 d453083d1e7cea0089918b4d24f7efae 331 PANTHER PTHR11751:SF338 2 330 1.2E-34 T 22-04-2016 SMGD1_RS06695 d453083d1e7cea0089918b4d24f7efae 331 PANTHER PTHR11751 2 330 1.2E-34 T 22-04-2016 SMGD1_RS06695 d453083d1e7cea0089918b4d24f7efae 331 Gene3D G3DSA:3.40.640.10 43 233 3.1E-33 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SMGD1_RS06695 d453083d1e7cea0089918b4d24f7efae 331 SUPERFAMILY SSF53383 3 330 6.77E-41 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SMGD1_RS05010 fb76fc7b43f5113417818d8e032ab6e7 157 Gene3D G3DSA:2.60.120.370 1 153 7.6E-40 T 22-04-2016 IPR004375 YhcH/YjgK/YiaL family SMGD1_RS05010 fb76fc7b43f5113417818d8e032ab6e7 157 PANTHER PTHR34986 2 155 1.7E-31 T 22-04-2016 SMGD1_RS05010 fb76fc7b43f5113417818d8e032ab6e7 157 SUPERFAMILY SSF51197 1 154 5.22E-35 T 22-04-2016 SMGD1_RS05010 fb76fc7b43f5113417818d8e032ab6e7 157 TIGRFAM TIGR00022 TIGR00022: YhcH/YjgK/YiaL family protein 1 153 4.9E-27 T 22-04-2016 IPR004375 YhcH/YjgK/YiaL family SMGD1_RS05010 fb76fc7b43f5113417818d8e032ab6e7 157 Pfam PF04074 Domain of unknown function (DUF386) 1 150 2.3E-36 T 22-04-2016 IPR004375 YhcH/YjgK/YiaL family SMGD1_RS06800 ce95d0e162477daab3338e472638d5e9 108 ProSitePatterns PS00018 EF-hand calcium-binding domain. 73 85 - T 22-04-2016 IPR018247 EF-Hand 1, calcium-binding site SMGD1_RS06800 ce95d0e162477daab3338e472638d5e9 108 ProSitePatterns PS00018 EF-hand calcium-binding domain. 30 42 - T 22-04-2016 IPR018247 EF-Hand 1, calcium-binding site SMGD1_RS06800 ce95d0e162477daab3338e472638d5e9 108 Gene3D G3DSA:1.10.238.10 26 88 1.6E-8 T 22-04-2016 IPR011992 EF-hand domain pair SMGD1_RS06800 ce95d0e162477daab3338e472638d5e9 108 Pfam PF13202 EF hand 69 87 3.8E-5 T 22-04-2016 IPR002048 EF-hand domain GO:0005509 SMGD1_RS06800 ce95d0e162477daab3338e472638d5e9 108 Pfam PF13202 EF hand 29 42 0.0049 T 22-04-2016 IPR002048 EF-hand domain GO:0005509 SMGD1_RS06800 ce95d0e162477daab3338e472638d5e9 108 SUPERFAMILY SSF47473 28 87 2.12E-8 T 22-04-2016 IPR011992 EF-hand domain pair SMGD1_RS10905 8fd0c8f38a86e13bd1301c69304a76d1 87 Pfam PF04296 Protein of unknown function (DUF448) 10 78 1.2E-6 T 22-04-2016 IPR007393 Domain of unknown function DUF448 SMGD1_RS10905 8fd0c8f38a86e13bd1301c69304a76d1 87 SUPERFAMILY SSF64376 6 81 2.22E-9 T 22-04-2016 IPR007393 Domain of unknown function DUF448 SMGD1_RS10905 8fd0c8f38a86e13bd1301c69304a76d1 87 Gene3D G3DSA:3.30.1230.10 3 81 1.8E-7 T 22-04-2016 IPR007393 Domain of unknown function DUF448 SMGD1_RS05140 28ec00528f105ccd289b6da19c0d56bd 489 PANTHER PTHR11819 6 482 2.4E-69 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 SMGD1_RS05140 28ec00528f105ccd289b6da19c0d56bd 489 Pfam PF00474 Sodium:solute symporter family 38 438 1.3E-26 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 SMGD1_RS14310 022694829d18d0e6ad2d4b47e0f5f83a 248 Gene3D G3DSA:3.40.50.620 78 211 9.8E-15 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMGD1_RS14310 022694829d18d0e6ad2d4b47e0f5f83a 248 Pfam PF02698 DUF218 domain 82 240 2.5E-26 T 22-04-2016 IPR003848 Domain of unknown function DUF218 SMGD1_RS14310 022694829d18d0e6ad2d4b47e0f5f83a 248 PANTHER PTHR30336:SF1 5 247 2.9E-46 T 22-04-2016 SMGD1_RS14310 022694829d18d0e6ad2d4b47e0f5f83a 248 PANTHER PTHR30336 5 247 2.9E-46 T 22-04-2016 SMGD1_RS12945 dc1236dc43a21445e27d2ee6e9f86935 152 PANTHER PTHR33603:SF1 1 152 2.4E-29 T 22-04-2016 SMGD1_RS12945 dc1236dc43a21445e27d2ee6e9f86935 152 SUPERFAMILY SSF75217 2 150 2.14E-35 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases SMGD1_RS12945 dc1236dc43a21445e27d2ee6e9f86935 152 PIRSF PIRSF004505 1 152 1.5E-37 T 22-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SMGD1_RS12945 dc1236dc43a21445e27d2ee6e9f86935 152 Gene3D G3DSA:3.40.1280.10 2 152 8.8E-38 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SMGD1_RS12945 dc1236dc43a21445e27d2ee6e9f86935 152 Pfam PF02590 Predicted SPOUT methyltransferase 2 151 3.1E-36 T 22-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SMGD1_RS12945 dc1236dc43a21445e27d2ee6e9f86935 152 PANTHER PTHR33603 1 152 2.4E-29 T 22-04-2016 SMGD1_RS12945 dc1236dc43a21445e27d2ee6e9f86935 152 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 152 22.45 T 22-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SMGD1_RS02410 3db6b1580c7f52b949ad1670be8fbe8b 203 Pfam PF08241 Methyltransferase domain 47 93 7.0E-12 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 SMGD1_RS02410 3db6b1580c7f52b949ad1670be8fbe8b 203 SUPERFAMILY SSF53335 36 125 3.58E-16 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS02410 3db6b1580c7f52b949ad1670be8fbe8b 203 Gene3D G3DSA:3.40.50.150 47 109 6.7E-17 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS01010 656abbc4e7bff408e4be89d576dd0e7b 78 Gene3D G3DSA:3.30.920.30 5 65 3.5E-11 T 22-04-2016 SMGD1_RS01010 656abbc4e7bff408e4be89d576dd0e7b 78 Pfam PF07927 HicA toxin of bacterial toxin-antitoxin, 8 62 4.7E-8 T 22-04-2016 IPR012933 HicA mRNA interferase family GO:0003729 SMGD1_RS01010 656abbc4e7bff408e4be89d576dd0e7b 78 SUPERFAMILY SSF54786 4 64 5.49E-10 T 22-04-2016 SMGD1_RS02425 5bcc69125d3dcbf7f169e73a1e3cb1d9 358 PANTHER PTHR12526 1 358 8.3E-58 T 22-04-2016 SMGD1_RS02425 5bcc69125d3dcbf7f169e73a1e3cb1d9 358 Pfam PF13439 Glycosyltransferase Family 4 15 166 7.9E-13 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain SMGD1_RS02425 5bcc69125d3dcbf7f169e73a1e3cb1d9 358 PANTHER PTHR12526:SF399 1 358 8.3E-58 T 22-04-2016 SMGD1_RS02425 5bcc69125d3dcbf7f169e73a1e3cb1d9 358 SUPERFAMILY SSF53756 1 358 1.67E-68 T 22-04-2016 SMGD1_RS02425 5bcc69125d3dcbf7f169e73a1e3cb1d9 358 Gene3D G3DSA:3.40.50.2000 179 332 4.8E-18 T 22-04-2016 SMGD1_RS02425 5bcc69125d3dcbf7f169e73a1e3cb1d9 358 Pfam PF00534 Glycosyl transferases group 1 181 332 1.1E-25 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 SMGD1_RS10870 5d2feb724ff6055ac4503dc225ddf762 271 Gene3D G3DSA:3.90.1170.20 2 121 1.1E-33 T 22-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 SMGD1_RS10870 5d2feb724ff6055ac4503dc225ddf762 271 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 14 99 1.4E-19 T 22-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 SMGD1_RS10870 5d2feb724ff6055ac4503dc225ddf762 271 SUPERFAMILY SSF51690 101 270 5.49E-56 T 22-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 SMGD1_RS10870 5d2feb724ff6055ac4503dc225ddf762 271 PANTHER PTHR32179 2 271 1.5E-96 T 22-04-2016 SMGD1_RS10870 5d2feb724ff6055ac4503dc225ddf762 271 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 101 269 8.6E-61 T 22-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 SMGD1_RS10870 5d2feb724ff6055ac4503dc225ddf762 271 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 7 270 2.2E-88 T 22-04-2016 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|UniPathway: UPA00253 SMGD1_RS10870 5d2feb724ff6055ac4503dc225ddf762 271 PIRSF PIRSF006250 1 271 1.1E-79 T 22-04-2016 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD SMGD1_RS10870 5d2feb724ff6055ac4503dc225ddf762 271 SUPERFAMILY SSF54675 2 99 2.94E-20 T 22-04-2016 SMGD1_RS10870 5d2feb724ff6055ac4503dc225ddf762 271 Gene3D G3DSA:3.20.20.70 122 260 4.2E-55 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMGD1_RS11275 6ffdab92c74f974d6364caf3c8ed77b7 270 TIGRFAM TIGR00073 hypB: hydrogenase accessory protein HypB 62 266 8.1E-84 T 22-04-2016 IPR004392 Hydrogenase accessory protein HypB GO:0006461|GO:0016151 SMGD1_RS11275 6ffdab92c74f974d6364caf3c8ed77b7 270 PANTHER PTHR30134 22 267 7.7E-132 T 22-04-2016 SMGD1_RS11275 6ffdab92c74f974d6364caf3c8ed77b7 270 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 87 246 2.2E-26 T 22-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain SMGD1_RS11275 6ffdab92c74f974d6364caf3c8ed77b7 270 SUPERFAMILY SSF52540 53 263 1.19E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS11275 6ffdab92c74f974d6364caf3c8ed77b7 270 Gene3D G3DSA:3.40.50.300 94 252 1.6E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS11275 6ffdab92c74f974d6364caf3c8ed77b7 270 PANTHER PTHR30134:SF0 22 267 7.7E-132 T 22-04-2016 SMGD1_RS04340 9f01d607253ab09e25becb8be42b3d86 420 Pfam PF03772 Competence protein 157 409 9.5E-26 T 22-04-2016 IPR004477 ComEC/Rec2-related protein SMGD1_RS04340 9f01d607253ab09e25becb8be42b3d86 420 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 169 342 2.9E-14 T 22-04-2016 IPR004477 ComEC/Rec2-related protein SMGD1_RS04340 9f01d607253ab09e25becb8be42b3d86 420 PANTHER PTHR30619 132 354 2.7E-18 T 22-04-2016 SMGD1_RS04340 9f01d607253ab09e25becb8be42b3d86 420 PANTHER PTHR30619:SF2 132 354 2.7E-18 T 22-04-2016 SMGD1_RS04995 2723cff3a03d636803f100a43c86fa5e 695 SUPERFAMILY SSF55073 292 433 1.33E-25 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS04995 2723cff3a03d636803f100a43c86fa5e 695 Gene3D G3DSA:3.20.20.450 454 685 2.1E-63 T 22-04-2016 IPR001633 EAL domain SMGD1_RS04995 2723cff3a03d636803f100a43c86fa5e 695 SUPERFAMILY SSF141868 454 685 3.79E-65 T 22-04-2016 IPR001633 EAL domain SMGD1_RS04995 2723cff3a03d636803f100a43c86fa5e 695 Pfam PF00990 Diguanylate cyclase, GGDEF domain 288 400 1.0E-22 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS04995 2723cff3a03d636803f100a43c86fa5e 695 SMART SM00052 447 688 1.7E-52 T 22-04-2016 IPR001633 EAL domain SMGD1_RS04995 2723cff3a03d636803f100a43c86fa5e 695 PANTHER PTHR33121:SF10 397 695 4.5E-39 T 22-04-2016 SMGD1_RS04995 2723cff3a03d636803f100a43c86fa5e 695 PANTHER PTHR33121 397 695 4.5E-39 T 22-04-2016 SMGD1_RS04995 2723cff3a03d636803f100a43c86fa5e 695 SMART SM00267 276 435 6.9E-21 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS04995 2723cff3a03d636803f100a43c86fa5e 695 Pfam PF00563 EAL domain 455 683 1.2E-58 T 22-04-2016 IPR001633 EAL domain SMGD1_RS04995 2723cff3a03d636803f100a43c86fa5e 695 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 284 412 2.2E-22 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS04995 2723cff3a03d636803f100a43c86fa5e 695 Gene3D G3DSA:3.30.70.270 289 407 1.3E-24 T 22-04-2016 SMGD1_RS09410 45e62f63fd19835cddb676da47628410 94 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 5.8E-10 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SMGD1_RS09410 45e62f63fd19835cddb676da47628410 94 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 5.8E-10 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SMGD1_RS09410 45e62f63fd19835cddb676da47628410 94 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 5.8E-10 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SMGD1_RS09410 45e62f63fd19835cddb676da47628410 94 SMART SM00411 1 91 2.5E-26 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SMGD1_RS09410 45e62f63fd19835cddb676da47628410 94 Pfam PF00216 Bacterial DNA-binding protein 1 90 4.8E-21 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SMGD1_RS09410 45e62f63fd19835cddb676da47628410 94 PANTHER PTHR33175 1 90 9.0E-16 T 22-04-2016 SMGD1_RS09410 45e62f63fd19835cddb676da47628410 94 SUPERFAMILY SSF47729 1 91 5.15E-21 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 SMGD1_RS09410 45e62f63fd19835cddb676da47628410 94 Gene3D G3DSA:4.10.520.10 1 91 3.1E-23 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 SMGD1_RS13900 4b7eeff1f925edff1c47cb367667bfb9 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 88 106 8.3E-35 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SMGD1_RS13900 4b7eeff1f925edff1c47cb367667bfb9 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 71 86 8.3E-35 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SMGD1_RS13900 4b7eeff1f925edff1c47cb367667bfb9 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 27 45 8.3E-35 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SMGD1_RS13900 4b7eeff1f925edff1c47cb367667bfb9 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 8.3E-35 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SMGD1_RS13900 4b7eeff1f925edff1c47cb367667bfb9 366 SUPERFAMILY SSF52540 3 304 4.16E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS13900 4b7eeff1f925edff1c47cb367667bfb9 366 Pfam PF06071 Protein of unknown function (DUF933) 282 365 1.4E-39 T 22-04-2016 IPR013029 Domain of unknown function DUF933 SMGD1_RS13900 4b7eeff1f925edff1c47cb367667bfb9 366 Gene3D G3DSA:3.40.50.300 4 131 1.3E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS13900 4b7eeff1f925edff1c47cb367667bfb9 366 Gene3D G3DSA:3.40.50.300 203 269 1.3E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS13900 4b7eeff1f925edff1c47cb367667bfb9 366 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 366 41.41 T 22-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 SMGD1_RS13900 4b7eeff1f925edff1c47cb367667bfb9 366 Gene3D G3DSA:3.10.20.30 270 366 1.1E-47 T 22-04-2016 IPR012675 Beta-grasp domain SMGD1_RS13900 4b7eeff1f925edff1c47cb367667bfb9 366 SUPERFAMILY SSF81271 282 363 1.59E-35 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 SMGD1_RS13900 4b7eeff1f925edff1c47cb367667bfb9 366 PANTHER PTHR23305 1 366 6.6E-182 T 22-04-2016 SMGD1_RS13900 4b7eeff1f925edff1c47cb367667bfb9 366 Gene3D G3DSA:1.10.150.300 132 202 1.2E-20 T 22-04-2016 IPR023192 TGS-like domain SMGD1_RS13900 4b7eeff1f925edff1c47cb367667bfb9 366 Pfam PF01926 50S ribosome-binding GTPase 5 116 8.3E-21 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SMGD1_RS13900 4b7eeff1f925edff1c47cb367667bfb9 366 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 366 1.1E-144 T 22-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 SMGD1_RS13900 4b7eeff1f925edff1c47cb367667bfb9 366 PIRSF PIRSF006641 1 366 2.3E-151 T 22-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 SMGD1_RS09480 62cf5d689aa993c20641bd2c1c7c36f1 225 Gene3D G3DSA:3.40.109.10 119 224 9.3E-42 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 SMGD1_RS09480 62cf5d689aa993c20641bd2c1c7c36f1 225 Gene3D G3DSA:3.40.109.10 4 64 9.3E-42 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 SMGD1_RS09480 62cf5d689aa993c20641bd2c1c7c36f1 225 SUPERFAMILY SSF55469 3 224 4.19E-40 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 SMGD1_RS09480 62cf5d689aa993c20641bd2c1c7c36f1 225 Pfam PF00881 Nitroreductase family 8 201 4.4E-35 T 22-04-2016 IPR029479 Nitroreductase SMGD1_RS09480 62cf5d689aa993c20641bd2c1c7c36f1 225 PANTHER PTHR23026 3 225 3.9E-30 T 22-04-2016 SMGD1_RS07590 04ee94e818dc810af65703f1dd4c4367 783 SUPERFAMILY SSF52980 543 713 4.34E-7 T 22-04-2016 IPR011335 Restriction endonuclease type II-like SMGD1_RS07590 04ee94e818dc810af65703f1dd4c4367 783 Pfam PF12705 PD-(D/E)XK nuclease superfamily 543 780 9.2E-34 T 22-04-2016 SMGD1_RS07590 04ee94e818dc810af65703f1dd4c4367 783 Gene3D G3DSA:3.40.50.300 405 448 3.4E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS07590 04ee94e818dc810af65703f1dd4c4367 783 Gene3D G3DSA:3.40.50.300 226 297 3.4E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS07590 04ee94e818dc810af65703f1dd4c4367 783 SUPERFAMILY SSF52540 230 503 1.99E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS00035 3dff1813d206e25b5ece1c247e39b8d4 234 PANTHER PTHR36452 6 233 9.1E-13 T 22-04-2016 SMGD1_RS00035 3dff1813d206e25b5ece1c247e39b8d4 234 PIRSF PIRSF028451 2 227 2.2E-39 T 22-04-2016 IPR015996 Uncharacterised conserved protein UCP028451 SMGD1_RS00035 3dff1813d206e25b5ece1c247e39b8d4 234 TIGRFAM TIGR02453 TIGR02453: TIGR02453 family protein 7 222 3.0E-41 T 22-04-2016 IPR012808 Conserved hypothetical protein CHP02453 SMGD1_RS00035 3dff1813d206e25b5ece1c247e39b8d4 234 PANTHER PTHR36452:SF1 6 233 9.1E-13 T 22-04-2016 SMGD1_RS00035 3dff1813d206e25b5ece1c247e39b8d4 234 Pfam PF09365 Conserved hypothetical protein (DUF2461) 10 219 1.5E-43 T 22-04-2016 IPR012808 Conserved hypothetical protein CHP02453 SMGD1_RS13205 bd0c990f867c77dc58727a2821083f24 190 Hamap MF_00165 Thymidylate kinase [tmk]. 1 189 19.9 T 22-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 SMGD1_RS13205 bd0c990f867c77dc58727a2821083f24 190 Gene3D G3DSA:3.40.50.300 1 189 2.2E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS13205 bd0c990f867c77dc58727a2821083f24 190 Pfam PF02223 Thymidylate kinase 5 185 2.9E-37 T 22-04-2016 SMGD1_RS13205 bd0c990f867c77dc58727a2821083f24 190 SUPERFAMILY SSF52540 1 188 7.45E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS13205 bd0c990f867c77dc58727a2821083f24 190 PANTHER PTHR10344 1 190 4.3E-37 T 22-04-2016 SMGD1_RS13205 bd0c990f867c77dc58727a2821083f24 190 PANTHER PTHR10344:SF0 1 190 4.3E-37 T 22-04-2016 SMGD1_RS13205 bd0c990f867c77dc58727a2821083f24 190 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 1 185 3.9E-42 T 22-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 SMGD1_RS13190 5b6f39ed65a46913b23e555e8298f334 575 SUPERFAMILY SSF51395 261 558 1.04E-77 T 22-04-2016 SMGD1_RS13190 5b6f39ed65a46913b23e555e8298f334 575 SUPERFAMILY SSF51395 9 184 1.04E-77 T 22-04-2016 SMGD1_RS13190 5b6f39ed65a46913b23e555e8298f334 575 PANTHER PTHR11938:SF50 142 187 3.2E-36 T 22-04-2016 SMGD1_RS13190 5b6f39ed65a46913b23e555e8298f334 575 PANTHER PTHR11938:SF50 273 552 3.2E-36 T 22-04-2016 SMGD1_RS13190 5b6f39ed65a46913b23e555e8298f334 575 Gene3D G3DSA:3.20.20.70 246 571 1.1E-113 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMGD1_RS13190 5b6f39ed65a46913b23e555e8298f334 575 Gene3D G3DSA:3.20.20.70 35 188 1.1E-113 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMGD1_RS13190 5b6f39ed65a46913b23e555e8298f334 575 PANTHER PTHR11938 142 187 3.2E-36 T 22-04-2016 SMGD1_RS13190 5b6f39ed65a46913b23e555e8298f334 575 PANTHER PTHR11938 273 552 3.2E-36 T 22-04-2016 SMGD1_RS13190 5b6f39ed65a46913b23e555e8298f334 575 Pfam PF01645 Conserved region in glutamate synthase 133 541 1.2E-59 T 22-04-2016 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 SMGD1_RS10375 b9637a945290e429d30e9c0c00d4266a 130 PANTHER PTHR30558 1 130 3.3E-26 T 22-04-2016 SMGD1_RS10375 b9637a945290e429d30e9c0c00d4266a 130 Pfam PF02472 Biopolymer transport protein ExbD/TolR 13 129 9.0E-26 T 22-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 SMGD1_RS10375 b9637a945290e429d30e9c0c00d4266a 130 TIGRFAM TIGR02804 ExbD_2: TonB system transport protein ExbD 11 129 5.7E-39 T 22-04-2016 IPR014171 TonB system transport protein ExbD type-2 GO:0006810|GO:0016020 SMGD1_RS10375 b9637a945290e429d30e9c0c00d4266a 130 PANTHER PTHR30558:SF3 1 130 3.3E-26 T 22-04-2016 SMGD1_RS07400 bf3d9e0a623b0bfc46e9beaeed658db0 101 PRINTS PR00605 Class IC cytochrome C signature 75 97 4.1E-5 T 22-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 SMGD1_RS07400 bf3d9e0a623b0bfc46e9beaeed658db0 101 PRINTS PR00605 Class IC cytochrome C signature 29 40 4.1E-5 T 22-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 SMGD1_RS07400 bf3d9e0a623b0bfc46e9beaeed658db0 101 SUPERFAMILY SSF46626 13 99 2.82E-15 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS07400 bf3d9e0a623b0bfc46e9beaeed658db0 101 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 20 97 1.9E-8 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS07400 bf3d9e0a623b0bfc46e9beaeed658db0 101 Gene3D G3DSA:1.10.760.10 21 100 2.7E-17 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS07030 28f001960d7b4159323c5421de8a8c6e 234 Pfam PF08238 Sel1 repeat 84 117 1.7E-7 T 22-04-2016 IPR006597 Sel1-like repeat SMGD1_RS07030 28f001960d7b4159323c5421de8a8c6e 234 Pfam PF08238 Sel1 repeat 173 187 54.0 T 22-04-2016 IPR006597 Sel1-like repeat SMGD1_RS07030 28f001960d7b4159323c5421de8a8c6e 234 Pfam PF08238 Sel1 repeat 122 155 2.8E-4 T 22-04-2016 IPR006597 Sel1-like repeat SMGD1_RS07030 28f001960d7b4159323c5421de8a8c6e 234 Pfam PF08238 Sel1 repeat 29 47 0.065 T 22-04-2016 IPR006597 Sel1-like repeat SMGD1_RS07030 28f001960d7b4159323c5421de8a8c6e 234 Pfam PF08238 Sel1 repeat 50 81 3.7E-8 T 22-04-2016 IPR006597 Sel1-like repeat SMGD1_RS07030 28f001960d7b4159323c5421de8a8c6e 234 PANTHER PTHR11102 29 234 7.3E-43 T 22-04-2016 SMGD1_RS07030 28f001960d7b4159323c5421de8a8c6e 234 Gene3D G3DSA:1.25.40.10 116 167 4.3E-15 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS07030 28f001960d7b4159323c5421de8a8c6e 234 Gene3D G3DSA:1.25.40.10 172 223 6.0E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS07030 28f001960d7b4159323c5421de8a8c6e 234 Gene3D G3DSA:1.25.40.10 21 115 1.4E-31 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS07030 28f001960d7b4159323c5421de8a8c6e 234 SMART SM00671 84 119 6.0E-9 T 22-04-2016 IPR006597 Sel1-like repeat SMGD1_RS07030 28f001960d7b4159323c5421de8a8c6e 234 SMART SM00671 16 47 170.0 T 22-04-2016 IPR006597 Sel1-like repeat SMGD1_RS07030 28f001960d7b4159323c5421de8a8c6e 234 SMART SM00671 48 83 1.1E-6 T 22-04-2016 IPR006597 Sel1-like repeat SMGD1_RS07030 28f001960d7b4159323c5421de8a8c6e 234 SMART SM00671 156 187 110.0 T 22-04-2016 IPR006597 Sel1-like repeat SMGD1_RS07030 28f001960d7b4159323c5421de8a8c6e 234 SMART SM00671 120 155 4.8E-6 T 22-04-2016 IPR006597 Sel1-like repeat SMGD1_RS07030 28f001960d7b4159323c5421de8a8c6e 234 SMART SM00671 188 219 17.0 T 22-04-2016 IPR006597 Sel1-like repeat SMGD1_RS07030 28f001960d7b4159323c5421de8a8c6e 234 SUPERFAMILY SSF81901 22 229 6.89E-45 T 22-04-2016 SMGD1_RS04025 3263aabb0dbb1141722769eed2a8cbe3 137 Pfam PF08447 PAS fold 29 112 6.0E-16 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 SMGD1_RS04025 3263aabb0dbb1141722769eed2a8cbe3 137 SMART SM00086 78 119 0.0077 T 22-04-2016 IPR001610 PAC motif SMGD1_RS04025 3263aabb0dbb1141722769eed2a8cbe3 137 SMART SM00091 6 72 0.0076 T 22-04-2016 IPR000014 PAS domain SMGD1_RS04025 3263aabb0dbb1141722769eed2a8cbe3 137 PANTHER PTHR32089 1 129 3.2E-24 T 22-04-2016 SMGD1_RS04025 3263aabb0dbb1141722769eed2a8cbe3 137 Gene3D G3DSA:3.30.450.20 17 113 7.1E-27 T 22-04-2016 SMGD1_RS04025 3263aabb0dbb1141722769eed2a8cbe3 137 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 12 125 1.8E-18 T 22-04-2016 IPR000014 PAS domain SMGD1_RS04025 3263aabb0dbb1141722769eed2a8cbe3 137 PANTHER PTHR32089:SF52 1 129 3.2E-24 T 22-04-2016 SMGD1_RS04025 3263aabb0dbb1141722769eed2a8cbe3 137 SUPERFAMILY SSF55785 17 112 8.03E-29 T 22-04-2016 IPR000014 PAS domain SMGD1_RS04295 053accbc38701969f90d22383f8aea50 173 Gene3D G3DSA:3.90.1720.10 56 172 2.8E-34 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SMGD1_RS04295 053accbc38701969f90d22383f8aea50 173 Pfam PF00877 NlpC/P60 family 67 170 5.1E-26 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SMGD1_RS04295 053accbc38701969f90d22383f8aea50 173 PANTHER PTHR21666 32 172 4.8E-29 T 22-04-2016 SMGD1_RS04295 053accbc38701969f90d22383f8aea50 173 SUPERFAMILY SSF54001 46 172 3.87E-34 T 22-04-2016 SMGD1_RS12280 47fef1ab1db77bb747861bf427498a9e 655 Pfam PF02120 Flagellar hook-length control protein FliK 563 628 8.2E-9 T 22-04-2016 IPR021136 Flagellar hook-length control protein-like, C-terminal SMGD1_RS05365 94feadbae24149c6420f10b83e0090d4 294 Pfam PF13847 Methyltransferase domain 121 234 2.6E-11 T 22-04-2016 IPR025714 Methyltransferase domain SMGD1_RS05365 94feadbae24149c6420f10b83e0090d4 294 Gene3D G3DSA:3.40.50.150 109 239 1.5E-16 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS05365 94feadbae24149c6420f10b83e0090d4 294 SUPERFAMILY SSF53335 89 245 1.48E-17 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS03525 ab2db64fef38c342b7334ffb8ef5b70d 1145 SUPERFAMILY SSF50692 857 1001 5.42E-15 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain SMGD1_RS03525 ab2db64fef38c342b7334ffb8ef5b70d 1145 Gene3D G3DSA:3.40.228.10 241 477 9.0E-47 T 22-04-2016 SMGD1_RS03525 ab2db64fef38c342b7334ffb8ef5b70d 1145 PANTHER PTHR11615:SF139 41 415 1.8E-81 T 22-04-2016 SMGD1_RS03525 ab2db64fef38c342b7334ffb8ef5b70d 1145 PANTHER PTHR11615:SF139 627 682 1.8E-81 T 22-04-2016 SMGD1_RS03525 ab2db64fef38c342b7334ffb8ef5b70d 1145 PANTHER PTHR11615:SF139 774 948 1.8E-81 T 22-04-2016 SMGD1_RS03525 ab2db64fef38c342b7334ffb8ef5b70d 1145 PANTHER PTHR11615:SF139 434 599 1.8E-81 T 22-04-2016 SMGD1_RS03525 ab2db64fef38c342b7334ffb8ef5b70d 1145 PANTHER PTHR11615:SF139 1041 1101 1.8E-81 T 22-04-2016 SMGD1_RS03525 ab2db64fef38c342b7334ffb8ef5b70d 1145 Gene3D G3DSA:3.40.50.740 528 588 1.2E-5 T 22-04-2016 SMGD1_RS03525 ab2db64fef38c342b7334ffb8ef5b70d 1145 Gene3D G3DSA:3.40.50.740 152 226 3.6E-9 T 22-04-2016 SMGD1_RS03525 ab2db64fef38c342b7334ffb8ef5b70d 1145 Gene3D G3DSA:2.20.25.90 90 151 1.7E-17 T 22-04-2016 SMGD1_RS03525 ab2db64fef38c342b7334ffb8ef5b70d 1145 Gene3D G3DSA:2.40.40.20 1050 1105 2.9E-45 T 22-04-2016 SMGD1_RS03525 ab2db64fef38c342b7334ffb8ef5b70d 1145 Gene3D G3DSA:2.40.40.20 828 953 2.9E-45 T 22-04-2016 SMGD1_RS03525 ab2db64fef38c342b7334ffb8ef5b70d 1145 Pfam PF00384 Molybdopterin oxidoreductase 151 601 3.3E-23 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 SMGD1_RS03525 ab2db64fef38c342b7334ffb8ef5b70d 1145 SUPERFAMILY SSF53706 91 824 5.23E-97 T 22-04-2016 SMGD1_RS03525 ab2db64fef38c342b7334ffb8ef5b70d 1145 SMART SM00926 92 148 9.6E-10 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 SMGD1_RS03525 ab2db64fef38c342b7334ffb8ef5b70d 1145 PANTHER PTHR11615 41 415 1.8E-81 T 22-04-2016 SMGD1_RS03525 ab2db64fef38c342b7334ffb8ef5b70d 1145 PANTHER PTHR11615 627 682 1.8E-81 T 22-04-2016 SMGD1_RS03525 ab2db64fef38c342b7334ffb8ef5b70d 1145 PANTHER PTHR11615 774 948 1.8E-81 T 22-04-2016 SMGD1_RS03525 ab2db64fef38c342b7334ffb8ef5b70d 1145 PANTHER PTHR11615 434 599 1.8E-81 T 22-04-2016 SMGD1_RS03525 ab2db64fef38c342b7334ffb8ef5b70d 1145 PANTHER PTHR11615 1041 1101 1.8E-81 T 22-04-2016 SMGD1_RS03525 ab2db64fef38c342b7334ffb8ef5b70d 1145 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 94 147 2.3E-11 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 SMGD1_RS12045 aca0bfb44cbaded566ca6fc1f9b47b25 163 Pfam PF10263 SprT-like family 74 144 1.0E-11 T 22-04-2016 IPR006640 SprT-like SMGD1_RS05760 267d663aeb88fbd8735c45dc24c57cce 419 TIGRFAM TIGR01343 hacA_fam: homoaconitate hydratase family protein 4 419 4.3E-165 T 22-04-2016 IPR006251 Homoaconitase/3-isopropylmalate dehydratase, large subunit GO:0008652|GO:0016836|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMGD1_RS05760 267d663aeb88fbd8735c45dc24c57cce 419 TIGRFAM TIGR02086 IPMI_arch: 3-isopropylmalate dehydratase, large subunit 3 419 1.3E-154 T 22-04-2016 IPR011826 Homoaconitase/3-isopropylmalate dehydratase, large subunit, prokaryotic GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMGD1_RS05760 267d663aeb88fbd8735c45dc24c57cce 419 PRINTS PR00415 Aconitase family signature 354 367 8.1E-22 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMGD1_RS05760 267d663aeb88fbd8735c45dc24c57cce 419 PRINTS PR00415 Aconitase family signature 203 216 8.1E-22 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMGD1_RS05760 267d663aeb88fbd8735c45dc24c57cce 419 PRINTS PR00415 Aconitase family signature 298 309 8.1E-22 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMGD1_RS05760 267d663aeb88fbd8735c45dc24c57cce 419 PRINTS PR00415 Aconitase family signature 127 142 8.1E-22 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMGD1_RS05760 267d663aeb88fbd8735c45dc24c57cce 419 PRINTS PR00415 Aconitase family signature 189 202 8.1E-22 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMGD1_RS05760 267d663aeb88fbd8735c45dc24c57cce 419 PRINTS PR00415 Aconitase family signature 113 126 8.1E-22 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMGD1_RS05760 267d663aeb88fbd8735c45dc24c57cce 419 ProSitePatterns PS01244 Aconitase family signature 2. 354 367 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMGD1_RS05760 267d663aeb88fbd8735c45dc24c57cce 419 ProSitePatterns PS00450 Aconitase family signature 1. 294 310 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMGD1_RS05760 267d663aeb88fbd8735c45dc24c57cce 419 Hamap MF_01027 3-isopropylmalate dehydratase large subunit [leuC]. 3 419 45.432 T 22-04-2016 IPR011826 Homoaconitase/3-isopropylmalate dehydratase, large subunit, prokaryotic GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMGD1_RS05760 267d663aeb88fbd8735c45dc24c57cce 419 Gene3D G3DSA:3.40.1060.10 160 265 6.5E-30 T 22-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMGD1_RS05760 267d663aeb88fbd8735c45dc24c57cce 419 PANTHER PTHR11670 1 419 5.7E-160 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMGD1_RS05760 267d663aeb88fbd8735c45dc24c57cce 419 Pfam PF00330 Aconitase family (aconitate hydratase) 7 413 3.6E-89 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMGD1_RS05760 267d663aeb88fbd8735c45dc24c57cce 419 Gene3D G3DSA:3.30.499.10 274 419 1.1E-50 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMGD1_RS05760 267d663aeb88fbd8735c45dc24c57cce 419 SUPERFAMILY SSF53732 2 419 1.26E-134 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMGD1_RS05760 267d663aeb88fbd8735c45dc24c57cce 419 Gene3D G3DSA:3.30.499.10 2 158 2.6E-34 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMGD1_RS05180 a7d90674a86ab628fd487ff0eb9fbfad 231 PANTHER PTHR24322:SF513 6 124 7.6E-32 T 22-04-2016 SMGD1_RS05180 a7d90674a86ab628fd487ff0eb9fbfad 231 PANTHER PTHR24322:SF513 140 171 7.6E-32 T 22-04-2016 SMGD1_RS05180 a7d90674a86ab628fd487ff0eb9fbfad 231 Gene3D G3DSA:3.40.50.720 2 210 3.2E-41 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS05180 a7d90674a86ab628fd487ff0eb9fbfad 231 Pfam PF00106 short chain dehydrogenase 2 181 4.6E-33 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMGD1_RS05180 a7d90674a86ab628fd487ff0eb9fbfad 231 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 68 79 1.3E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMGD1_RS05180 a7d90674a86ab628fd487ff0eb9fbfad 231 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 140 159 1.3E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMGD1_RS05180 a7d90674a86ab628fd487ff0eb9fbfad 231 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 120 128 1.3E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMGD1_RS05180 a7d90674a86ab628fd487ff0eb9fbfad 231 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 140 159 4.2E-17 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMGD1_RS05180 a7d90674a86ab628fd487ff0eb9fbfad 231 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 114 130 4.2E-17 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMGD1_RS05180 a7d90674a86ab628fd487ff0eb9fbfad 231 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 4.2E-17 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMGD1_RS05180 a7d90674a86ab628fd487ff0eb9fbfad 231 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 68 79 4.2E-17 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMGD1_RS05180 a7d90674a86ab628fd487ff0eb9fbfad 231 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 178 4.2E-17 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMGD1_RS05180 a7d90674a86ab628fd487ff0eb9fbfad 231 SUPERFAMILY SSF51735 1 207 3.88E-40 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS05180 a7d90674a86ab628fd487ff0eb9fbfad 231 PANTHER PTHR24322 6 124 7.6E-32 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMGD1_RS05180 a7d90674a86ab628fd487ff0eb9fbfad 231 PANTHER PTHR24322 140 171 7.6E-32 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMGD1_RS09060 cd4dd31bebd976294daaf0c0079081a8 320 Gene3D G3DSA:3.30.470.20 183 315 2.0E-12 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SMGD1_RS09060 cd4dd31bebd976294daaf0c0079081a8 320 PANTHER PTHR23132 46 320 4.1E-21 T 22-04-2016 SMGD1_RS09060 cd4dd31bebd976294daaf0c0079081a8 320 Gene3D G3DSA:3.30.1490.20 98 182 5.2E-11 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SMGD1_RS09060 cd4dd31bebd976294daaf0c0079081a8 320 Pfam PF07478 D-ala D-ala ligase C-terminus 109 312 2.7E-14 T 22-04-2016 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SMGD1_RS09060 cd4dd31bebd976294daaf0c0079081a8 320 SUPERFAMILY SSF56059 101 303 4.07E-23 T 22-04-2016 SMGD1_RS05635 40432f7c2ef33c0ea1c277552385290f 304 Gene3D G3DSA:3.40.1350.10 209 289 4.3E-7 T 22-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 SMGD1_RS05635 40432f7c2ef33c0ea1c277552385290f 304 Pfam PF03008 Archaea bacterial proteins of unknown function 146 236 9.8E-14 T 22-04-2016 IPR004256 Domain of unknown function DUF234, DEXX-box ATPase C-terminal SMGD1_RS08325 3e9d36f72963da6848dcefa3d5fa1fb4 537 Pfam PF00732 GMC oxidoreductase 4 280 5.0E-9 T 22-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 SMGD1_RS08325 3e9d36f72963da6848dcefa3d5fa1fb4 537 Gene3D G3DSA:3.50.50.60 204 305 3.2E-60 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS08325 3e9d36f72963da6848dcefa3d5fa1fb4 537 Gene3D G3DSA:3.50.50.60 468 535 3.2E-60 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS08325 3e9d36f72963da6848dcefa3d5fa1fb4 537 Gene3D G3DSA:3.50.50.60 430 431 3.2E-60 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS08325 3e9d36f72963da6848dcefa3d5fa1fb4 537 Gene3D G3DSA:3.50.50.60 2 145 3.2E-60 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS08325 3e9d36f72963da6848dcefa3d5fa1fb4 537 PANTHER PTHR11552 4 537 1.8E-54 T 22-04-2016 SMGD1_RS08325 3e9d36f72963da6848dcefa3d5fa1fb4 537 PANTHER PTHR11552:SF139 4 537 1.8E-54 T 22-04-2016 SMGD1_RS08325 3e9d36f72963da6848dcefa3d5fa1fb4 537 Pfam PF05199 GMC oxidoreductase 412 526 4.0E-16 T 22-04-2016 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 SMGD1_RS08325 3e9d36f72963da6848dcefa3d5fa1fb4 537 SUPERFAMILY SSF51905 1 297 9.17E-46 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS08325 3e9d36f72963da6848dcefa3d5fa1fb4 537 SUPERFAMILY SSF51905 477 535 9.17E-46 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS00140 fe65a3833f1c2f351584812b5f501607 397 SUPERFAMILY SSF51338 356 384 6.86E-12 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SMGD1_RS00140 fe65a3833f1c2f351584812b5f501607 397 SUPERFAMILY SSF51338 2 48 6.86E-12 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SMGD1_RS00140 fe65a3833f1c2f351584812b5f501607 397 Pfam PF01979 Amidohydrolase family 140 393 1.3E-9 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 SMGD1_RS00140 fe65a3833f1c2f351584812b5f501607 397 PANTHER PTHR11647:SF70 1 397 6.1E-66 T 22-04-2016 SMGD1_RS00140 fe65a3833f1c2f351584812b5f501607 397 SUPERFAMILY SSF51556 50 357 4.14E-61 T 22-04-2016 IPR032466 Metal-dependent hydrolase SMGD1_RS00140 fe65a3833f1c2f351584812b5f501607 397 Gene3D G3DSA:3.20.20.140 65 372 1.2E-57 T 22-04-2016 SMGD1_RS00140 fe65a3833f1c2f351584812b5f501607 397 Gene3D G3DSA:2.30.40.10 1 64 4.9E-12 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SMGD1_RS00140 fe65a3833f1c2f351584812b5f501607 397 PANTHER PTHR11647 1 397 6.1E-66 T 22-04-2016 SMGD1_RS12870 0010a73b28babfdcadd8f7843f8bb981 731 PANTHER PTHR14226:SF37 18 110 2.6E-72 T 22-04-2016 SMGD1_RS12870 0010a73b28babfdcadd8f7843f8bb981 731 PANTHER PTHR14226:SF37 127 453 2.6E-72 T 22-04-2016 SMGD1_RS12870 0010a73b28babfdcadd8f7843f8bb981 731 Pfam PF01103 Surface antigen 452 731 3.9E-10 T 22-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 SMGD1_RS12870 0010a73b28babfdcadd8f7843f8bb981 731 Gene3D G3DSA:3.40.1090.10 18 219 4.5E-11 T 22-04-2016 SMGD1_RS12870 0010a73b28babfdcadd8f7843f8bb981 731 SUPERFAMILY SSF52151 122 270 7.06E-53 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 SMGD1_RS12870 0010a73b28babfdcadd8f7843f8bb981 731 SUPERFAMILY SSF52151 18 91 7.06E-53 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 SMGD1_RS12870 0010a73b28babfdcadd8f7843f8bb981 731 Pfam PF01734 Patatin-like phospholipase 24 216 5.0E-25 T 22-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 SMGD1_RS12870 0010a73b28babfdcadd8f7843f8bb981 731 PANTHER PTHR14226 18 110 2.6E-72 T 22-04-2016 SMGD1_RS12870 0010a73b28babfdcadd8f7843f8bb981 731 PANTHER PTHR14226 127 453 2.6E-72 T 22-04-2016 SMGD1_RS10400 5db8f911eebe511183780289db0776e8 464 PANTHER PTHR21666 277 456 8.3E-82 T 22-04-2016 SMGD1_RS10400 5db8f911eebe511183780289db0776e8 464 Gene3D G3DSA:1.10.530.10 435 457 6.6E-40 T 22-04-2016 SMGD1_RS10400 5db8f911eebe511183780289db0776e8 464 Gene3D G3DSA:1.10.530.10 274 400 6.6E-40 T 22-04-2016 SMGD1_RS10400 5db8f911eebe511183780289db0776e8 464 SUPERFAMILY SSF53955 438 452 2.69E-37 T 22-04-2016 IPR023346 Lysozyme-like domain SMGD1_RS10400 5db8f911eebe511183780289db0776e8 464 SUPERFAMILY SSF53955 248 403 2.69E-37 T 22-04-2016 IPR023346 Lysozyme-like domain SMGD1_RS10400 5db8f911eebe511183780289db0776e8 464 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 52 268 3.7E-26 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SMGD1_RS10400 5db8f911eebe511183780289db0776e8 464 SUPERFAMILY SSF53850 49 270 7.44E-27 T 22-04-2016 SMGD1_RS10400 5db8f911eebe511183780289db0776e8 464 SMART SM00062 56 272 9.6E-5 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SMGD1_RS10400 5db8f911eebe511183780289db0776e8 464 PANTHER PTHR21666:SF215 277 456 8.3E-82 T 22-04-2016 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 SMGD1_RS10400 5db8f911eebe511183780289db0776e8 464 Gene3D G3DSA:3.40.190.10 158 221 1.8E-4 T 22-04-2016 SMGD1_RS10400 5db8f911eebe511183780289db0776e8 464 Pfam PF01464 Transglycosylase SLT domain 297 410 6.0E-23 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 SMGD1_RS10400 5db8f911eebe511183780289db0776e8 464 Gene3D G3DSA:3.40.190.10 34 157 1.3E-15 T 22-04-2016 SMGD1_RS09255 b4f4041fca1a4b11ba62d827b3b72ffc 153 PANTHER PTHR23091 1 143 1.7E-28 T 22-04-2016 SMGD1_RS09255 b4f4041fca1a4b11ba62d827b3b72ffc 153 Pfam PF00583 Acetyltransferase (GNAT) family 46 121 1.2E-14 T 22-04-2016 IPR000182 GNAT domain GO:0008080 SMGD1_RS09255 b4f4041fca1a4b11ba62d827b3b72ffc 153 Gene3D G3DSA:3.40.630.30 1 143 1.1E-29 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMGD1_RS09255 b4f4041fca1a4b11ba62d827b3b72ffc 153 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 12 140 1.3E-26 T 22-04-2016 IPR006464 Ribosomal-protein-alanine acetyltransferase GO:0006474|GO:0016407 SMGD1_RS09255 b4f4041fca1a4b11ba62d827b3b72ffc 153 SUPERFAMILY SSF55729 1 142 2.06E-29 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMGD1_RS05380 069b88aab8baa825fba9ecbf05ffe133 430 PANTHER PTHR33507:SF1 1 430 5.5E-128 T 22-04-2016 SMGD1_RS05380 069b88aab8baa825fba9ecbf05ffe133 430 PANTHER PTHR33507 1 430 5.5E-128 T 22-04-2016 SMGD1_RS05380 069b88aab8baa825fba9ecbf05ffe133 430 SUPERFAMILY SSF52096 6 190 2.56E-24 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SMGD1_RS05380 069b88aab8baa825fba9ecbf05ffe133 430 Gene3D G3DSA:2.40.50.140 371 428 6.6E-12 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMGD1_RS05380 069b88aab8baa825fba9ecbf05ffe133 430 Pfam PF01957 NfeD-like C-terminal, partner-binding 291 428 9.3E-31 T 22-04-2016 IPR002810 NfeD-like, C-terminal domain SMGD1_RS05380 069b88aab8baa825fba9ecbf05ffe133 430 SUPERFAMILY SSF141322 366 428 2.48E-14 T 22-04-2016 SMGD1_RS05380 069b88aab8baa825fba9ecbf05ffe133 430 Gene3D G3DSA:3.90.226.10 166 202 7.7E-16 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SMGD1_RS05380 069b88aab8baa825fba9ecbf05ffe133 430 Gene3D G3DSA:3.90.226.10 21 122 7.7E-16 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SMGD1_RS02385 49b1c92141b3264a113b7d3193c265f9 337 Pfam PF16363 GDP-mannose 4,6 dehydratase 6 326 2.2E-92 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS02385 49b1c92141b3264a113b7d3193c265f9 337 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 4 334 1.1E-139 T 22-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 SMGD1_RS02385 49b1c92141b3264a113b7d3193c265f9 337 Gene3D G3DSA:3.90.25.10 196 335 7.3E-47 T 22-04-2016 SMGD1_RS02385 49b1c92141b3264a113b7d3193c265f9 337 PANTHER PTHR10366 4 333 1.3E-153 T 22-04-2016 SMGD1_RS02385 49b1c92141b3264a113b7d3193c265f9 337 PANTHER PTHR10366:SF437 4 333 1.3E-153 T 22-04-2016 SMGD1_RS02385 49b1c92141b3264a113b7d3193c265f9 337 SUPERFAMILY SSF51735 3 335 7.77E-86 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS02385 49b1c92141b3264a113b7d3193c265f9 337 Gene3D G3DSA:3.40.50.720 3 195 5.2E-66 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS12515 56fde7d6a2add7a0ff2baf24e9680c1e 137 SUPERFAMILY SSF46785 4 114 4.62E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMGD1_RS12515 56fde7d6a2add7a0ff2baf24e9680c1e 137 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 4 116 6.8E-30 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type SMGD1_RS12515 56fde7d6a2add7a0ff2baf24e9680c1e 137 PANTHER PTHR33221 3 116 2.0E-32 T 22-04-2016 SMGD1_RS12515 56fde7d6a2add7a0ff2baf24e9680c1e 137 Gene3D G3DSA:1.10.10.10 4 127 5.1E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMGD1_RS12515 56fde7d6a2add7a0ff2baf24e9680c1e 137 Pfam PF02082 Transcriptional regulator 4 83 2.1E-24 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type SMGD1_RS12515 56fde7d6a2add7a0ff2baf24e9680c1e 137 PANTHER PTHR33221:SF1 3 116 2.0E-32 T 22-04-2016 SMGD1_RS12515 56fde7d6a2add7a0ff2baf24e9680c1e 137 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 50 68 - T 22-04-2016 IPR030489 Transcription regulator Rrf2-type, conserved site SMGD1_RS00970 1288524f436ffdcda08ced354b7ac135 126 ProSitePatterns PS00550 Hemerythrin family signature. 48 71 - T 22-04-2016 IPR016131 Haemerythrin, iron-binding site GO:0046872 SMGD1_RS00970 1288524f436ffdcda08ced354b7ac135 126 Gene3D G3DSA:1.20.120.50 2 119 5.4E-17 T 22-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 SMGD1_RS00970 1288524f436ffdcda08ced354b7ac135 126 SUPERFAMILY SSF47188 2 119 4.58E-20 T 22-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 SMGD1_RS00575 db86d4faa0262949301046bba6380d2a 380 Gene3D G3DSA:3.40.50.2300 154 305 1.6E-15 T 22-04-2016 SMGD1_RS00575 db86d4faa0262949301046bba6380d2a 380 PANTHER PTHR30483:SF11 5 359 1.1E-52 T 22-04-2016 SMGD1_RS00575 db86d4faa0262949301046bba6380d2a 380 Gene3D G3DSA:3.40.50.2300 306 354 1.7E-24 T 22-04-2016 SMGD1_RS00575 db86d4faa0262949301046bba6380d2a 380 Gene3D G3DSA:3.40.50.2300 26 151 1.7E-24 T 22-04-2016 SMGD1_RS00575 db86d4faa0262949301046bba6380d2a 380 PANTHER PTHR30483 5 359 1.1E-52 T 22-04-2016 SMGD1_RS00575 db86d4faa0262949301046bba6380d2a 380 SUPERFAMILY SSF53822 28 376 4.71E-56 T 22-04-2016 IPR028082 Periplasmic binding protein-like I SMGD1_RS00575 db86d4faa0262949301046bba6380d2a 380 Pfam PF13458 Periplasmic binding protein 29 370 8.8E-50 T 22-04-2016 IPR028081 Leucine-binding protein domain SMGD1_RS03750 004f38ca5bda5afe3361d65c9ae73c93 312 Pfam PF00425 chorismate binding enzyme 65 308 4.1E-59 T 22-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal SMGD1_RS03750 004f38ca5bda5afe3361d65c9ae73c93 312 SUPERFAMILY SSF56322 48 309 1.01E-63 T 22-04-2016 IPR005801 ADC synthase GO:0009058 SMGD1_RS03750 004f38ca5bda5afe3361d65c9ae73c93 312 PRINTS PR00095 Anthranilate synthase component I signature 167 180 1.5E-7 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SMGD1_RS03750 004f38ca5bda5afe3361d65c9ae73c93 312 PRINTS PR00095 Anthranilate synthase component I signature 153 166 1.5E-7 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SMGD1_RS03750 004f38ca5bda5afe3361d65c9ae73c93 312 PRINTS PR00095 Anthranilate synthase component I signature 251 265 1.5E-7 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SMGD1_RS03750 004f38ca5bda5afe3361d65c9ae73c93 312 Gene3D G3DSA:3.60.120.10 54 309 2.1E-67 T 22-04-2016 IPR005801 ADC synthase GO:0009058 SMGD1_RS03750 004f38ca5bda5afe3361d65c9ae73c93 312 PANTHER PTHR11236 62 309 2.9E-55 T 22-04-2016 SMGD1_RS09870 646bfdf27c45f52ee9656b082f51ebbf 335 Pfam PF00534 Glycosyl transferases group 1 158 309 1.2E-19 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 SMGD1_RS09870 646bfdf27c45f52ee9656b082f51ebbf 335 Gene3D G3DSA:3.40.50.2000 156 276 8.1E-11 T 22-04-2016 SMGD1_RS09870 646bfdf27c45f52ee9656b082f51ebbf 335 PANTHER PTHR12526 109 334 4.8E-19 T 22-04-2016 SMGD1_RS09870 646bfdf27c45f52ee9656b082f51ebbf 335 SUPERFAMILY SSF53756 43 334 1.67E-35 T 22-04-2016 SMGD1_RS04620 26fd37675795b2a755cd51e5d184efee 105 Gene3D G3DSA:3.30.1310.10 1 97 2.4E-30 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family SMGD1_RS04620 26fd37675795b2a755cd51e5d184efee 105 SUPERFAMILY SSF82607 5 95 4.05E-21 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family SMGD1_RS04620 26fd37675795b2a755cd51e5d184efee 105 PANTHER PTHR33449 1 104 9.2E-13 T 22-04-2016 SMGD1_RS04620 26fd37675795b2a755cd51e5d184efee 105 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 3 99 9.3E-22 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family SMGD1_RS04620 26fd37675795b2a755cd51e5d184efee 105 Pfam PF02575 YbaB/EbfC DNA-binding family 10 96 9.3E-21 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family SMGD1_RS04620 26fd37675795b2a755cd51e5d184efee 105 PIRSF PIRSF004555 1 105 9.7E-25 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family SMGD1_RS04620 26fd37675795b2a755cd51e5d184efee 105 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 3 95 17.65 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family SMGD1_RS05375 b7f1dbbe7a89ef3460cb62228f6aa0cd 251 PRINTS PR00721 Stomatin signature 199 222 3.8E-59 T 22-04-2016 IPR001972 Stomatin family GO:0016020 SMGD1_RS05375 b7f1dbbe7a89ef3460cb62228f6aa0cd 251 PRINTS PR00721 Stomatin signature 131 154 3.8E-59 T 22-04-2016 IPR001972 Stomatin family GO:0016020 SMGD1_RS05375 b7f1dbbe7a89ef3460cb62228f6aa0cd 251 PRINTS PR00721 Stomatin signature 111 128 3.8E-59 T 22-04-2016 IPR001972 Stomatin family GO:0016020 SMGD1_RS05375 b7f1dbbe7a89ef3460cb62228f6aa0cd 251 PRINTS PR00721 Stomatin signature 174 195 3.8E-59 T 22-04-2016 IPR001972 Stomatin family GO:0016020 SMGD1_RS05375 b7f1dbbe7a89ef3460cb62228f6aa0cd 251 PRINTS PR00721 Stomatin signature 29 51 3.8E-59 T 22-04-2016 IPR001972 Stomatin family GO:0016020 SMGD1_RS05375 b7f1dbbe7a89ef3460cb62228f6aa0cd 251 PRINTS PR00721 Stomatin signature 76 97 3.8E-59 T 22-04-2016 IPR001972 Stomatin family GO:0016020 SMGD1_RS05375 b7f1dbbe7a89ef3460cb62228f6aa0cd 251 PRINTS PR00721 Stomatin signature 155 173 3.8E-59 T 22-04-2016 IPR001972 Stomatin family GO:0016020 SMGD1_RS05375 b7f1dbbe7a89ef3460cb62228f6aa0cd 251 Pfam PF01145 SPFH domain / Band 7 family 27 195 3.1E-37 T 22-04-2016 IPR001107 Band 7 domain SMGD1_RS05375 b7f1dbbe7a89ef3460cb62228f6aa0cd 251 SMART SM00244 22 179 6.4E-66 T 22-04-2016 IPR001107 Band 7 domain SMGD1_RS05375 b7f1dbbe7a89ef3460cb62228f6aa0cd 251 PANTHER PTHR10264:SF60 7 247 2.8E-113 T 22-04-2016 SMGD1_RS05375 b7f1dbbe7a89ef3460cb62228f6aa0cd 251 PANTHER PTHR10264 7 247 2.8E-113 T 22-04-2016 IPR001972 Stomatin family GO:0016020 SMGD1_RS05375 b7f1dbbe7a89ef3460cb62228f6aa0cd 251 SUPERFAMILY SSF117892 53 186 9.02E-46 T 22-04-2016 IPR001107 Band 7 domain SMGD1_RS06615 d6d6972c92d0fcdd1dd82c1e9c9ad800 247 Pfam PF00950 ABC 3 transport family 5 238 4.9E-8 T 22-04-2016 IPR001626 ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 SMGD1_RS06615 d6d6972c92d0fcdd1dd82c1e9c9ad800 247 SUPERFAMILY SSF81345 11 233 3.14E-8 T 22-04-2016 IPR029022 ABC transporter, BtuC-like SMGD1_RS05280 87d0e99a09ff05df6e6561bf7e37e190 274 SUPERFAMILY SSF64518 1 274 2.75E-75 T 22-04-2016 SMGD1_RS05280 87d0e99a09ff05df6e6561bf7e37e190 274 Pfam PF00700 Bacterial flagellin C-terminal helical region 192 273 2.1E-25 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SMGD1_RS05280 87d0e99a09ff05df6e6561bf7e37e190 274 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 5.1E-39 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SMGD1_RS05280 87d0e99a09ff05df6e6561bf7e37e190 274 PANTHER PTHR30244:SF1 3 274 3.8E-84 T 22-04-2016 SMGD1_RS05280 87d0e99a09ff05df6e6561bf7e37e190 274 Gene3D G3DSA:1.20.1330.10 55 230 2.6E-48 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SMGD1_RS05280 87d0e99a09ff05df6e6561bf7e37e190 274 PANTHER PTHR30244 3 274 3.8E-84 T 22-04-2016 SMGD1_RS05280 87d0e99a09ff05df6e6561bf7e37e190 274 PRINTS PR00207 Flagellin signature 76 95 1.0E-21 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 SMGD1_RS05280 87d0e99a09ff05df6e6561bf7e37e190 274 PRINTS PR00207 Flagellin signature 37 54 1.0E-21 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 SMGD1_RS05280 87d0e99a09ff05df6e6561bf7e37e190 274 PRINTS PR00207 Flagellin signature 111 134 1.0E-21 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 SMGD1_RS02285 d2ef6899a25ae5f4b8fcd874bd269f2e 401 Gene3D G3DSA:3.40.50.2000 216 299 5.1E-4 T 22-04-2016 SMGD1_RS02285 d2ef6899a25ae5f4b8fcd874bd269f2e 401 PANTHER PTHR12526 4 397 9.8E-13 T 22-04-2016 SMGD1_RS02285 d2ef6899a25ae5f4b8fcd874bd269f2e 401 Pfam PF00534 Glycosyl transferases group 1 217 368 2.5E-13 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 SMGD1_RS02285 d2ef6899a25ae5f4b8fcd874bd269f2e 401 SUPERFAMILY SSF53756 22 397 2.56E-30 T 22-04-2016 SMGD1_RS01730 3e30d3ed7db458f6ad0e1a8a7706c55f 273 SMART SM00267 106 273 1.6E-21 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS01730 3e30d3ed7db458f6ad0e1a8a7706c55f 273 Gene3D G3DSA:3.30.70.270 119 270 1.2E-31 T 22-04-2016 SMGD1_RS01730 3e30d3ed7db458f6ad0e1a8a7706c55f 273 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 115 270 6.0E-30 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS01730 3e30d3ed7db458f6ad0e1a8a7706c55f 273 SUPERFAMILY SSF55073 122 265 2.51E-26 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS01730 3e30d3ed7db458f6ad0e1a8a7706c55f 273 Pfam PF00990 Diguanylate cyclase, GGDEF domain 118 264 5.0E-28 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS03145 4ff718363d7ba3c2cb2f2dab4992c1ed 103 Pfam PF04519 Polymer-forming cytoskeletal 4 84 1.1E-19 T 22-04-2016 IPR007607 Protein of unknown function DUF583 SMGD1_RS03145 4ff718363d7ba3c2cb2f2dab4992c1ed 103 PANTHER PTHR35024 1 93 1.7E-20 T 22-04-2016 SMGD1_RS00270 885206867681d11f5d03adf2e494e2ef 144 PANTHER PTHR37691:SF1 4 144 3.8E-13 T 22-04-2016 SMGD1_RS00270 885206867681d11f5d03adf2e494e2ef 144 PANTHER PTHR37691 4 144 3.8E-13 T 22-04-2016 SMGD1_RS00270 885206867681d11f5d03adf2e494e2ef 144 SUPERFAMILY SSF75169 33 144 1.68E-23 T 22-04-2016 IPR027396 DsrEFH-like SMGD1_RS00270 885206867681d11f5d03adf2e494e2ef 144 Gene3D G3DSA:3.40.1260.10 31 142 4.6E-30 T 22-04-2016 IPR027396 DsrEFH-like SMGD1_RS00270 885206867681d11f5d03adf2e494e2ef 144 Pfam PF02635 DsrE/DsrF-like family 52 143 6.2E-9 T 22-04-2016 IPR003787 Sulphur relay, DsrE/F-like protein SMGD1_RS06700 0129e6e862beba13a83d4fadf936af5e 265 SUPERFAMILY SSF56112 5 230 3.94E-30 T 22-04-2016 IPR011009 Protein kinase-like domain SMGD1_RS06700 0129e6e862beba13a83d4fadf936af5e 265 Gene3D G3DSA:3.30.200.20 1 93 5.1E-11 T 22-04-2016 SMGD1_RS06700 0129e6e862beba13a83d4fadf936af5e 265 Gene3D G3DSA:3.90.1200.10 94 262 4.0E-20 T 22-04-2016 SMGD1_RS06700 0129e6e862beba13a83d4fadf936af5e 265 Pfam PF01636 Phosphotransferase enzyme family 24 210 6.1E-20 T 22-04-2016 IPR002575 Aminoglycoside phosphotransferase SMGD1_RS11755 34f72dbc0d410d7bf8afc8ddbcfbe7f7 875 Gene3D G3DSA:2.60.40.420 550 651 5.3E-34 T 22-04-2016 IPR008972 Cupredoxin SMGD1_RS11755 34f72dbc0d410d7bf8afc8ddbcfbe7f7 875 TIGRFAM TIGR04246 nitrous_NosZ_Gp: nitrous-oxide reductase, Sec-dependent 47 653 5.8E-258 T 22-04-2016 IPR026468 Nitrous-oxide reductase, Sec-dependent SMGD1_RS11755 34f72dbc0d410d7bf8afc8ddbcfbe7f7 875 PANTHER PTHR22888 559 692 2.4E-20 T 22-04-2016 SMGD1_RS11755 34f72dbc0d410d7bf8afc8ddbcfbe7f7 875 Gene3D G3DSA:1.10.760.10 782 867 1.3E-13 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS11755 34f72dbc0d410d7bf8afc8ddbcfbe7f7 875 Pfam PF00034 Cytochrome c 780 867 2.9E-7 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS11755 34f72dbc0d410d7bf8afc8ddbcfbe7f7 875 SUPERFAMILY SSF49503 566 658 2.3E-26 T 22-04-2016 IPR008972 Cupredoxin SMGD1_RS11755 34f72dbc0d410d7bf8afc8ddbcfbe7f7 875 SUPERFAMILY SSF49503 478 535 2.3E-26 T 22-04-2016 IPR008972 Cupredoxin SMGD1_RS11755 34f72dbc0d410d7bf8afc8ddbcfbe7f7 875 Pfam PF13473 Cupredoxin-like domain 566 637 1.4E-6 T 22-04-2016 IPR028096 EfeO-type cupredoxin-like domain SMGD1_RS11755 34f72dbc0d410d7bf8afc8ddbcfbe7f7 875 PANTHER PTHR22888:SF3 559 692 2.4E-20 T 22-04-2016 SMGD1_RS11755 34f72dbc0d410d7bf8afc8ddbcfbe7f7 875 SUPERFAMILY SSF46626 769 870 1.12E-14 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS11755 34f72dbc0d410d7bf8afc8ddbcfbe7f7 875 Gene3D G3DSA:2.130.10.10 97 526 5.2E-113 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 SMGD1_RS11755 34f72dbc0d410d7bf8afc8ddbcfbe7f7 875 SUPERFAMILY SSF50974 51 517 3.27E-89 T 22-04-2016 IPR011045 Nitrous oxide reductase, N-terminal SMGD1_RS12735 9d4bf6d3afc085bff461d545db51a067 113 Pfam PF03960 ArsC family 4 110 1.8E-10 T 22-04-2016 IPR006660 Arsenate reductase-like SMGD1_RS12735 9d4bf6d3afc085bff461d545db51a067 113 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 1 110 1.7E-23 T 22-04-2016 IPR006504 Transcriptional regulator Spx/MgsR SMGD1_RS12735 9d4bf6d3afc085bff461d545db51a067 113 SUPERFAMILY SSF52833 1 111 2.48E-28 T 22-04-2016 IPR012336 Thioredoxin-like fold SMGD1_RS12735 9d4bf6d3afc085bff461d545db51a067 113 PANTHER PTHR30041 1 111 9.1E-21 T 22-04-2016 SMGD1_RS12735 9d4bf6d3afc085bff461d545db51a067 113 Gene3D G3DSA:3.40.30.10 1 111 6.2E-31 T 22-04-2016 IPR012336 Thioredoxin-like fold SMGD1_RS12735 9d4bf6d3afc085bff461d545db51a067 113 PANTHER PTHR30041:SF3 1 111 9.1E-21 T 22-04-2016 SMGD1_RS06975 6e0fce7a7ec7a8beb394952f86bcc893 363 Pfam PF00656 Caspase domain 129 358 3.2E-15 T 22-04-2016 SMGD1_RS06975 6e0fce7a7ec7a8beb394952f86bcc893 363 SUPERFAMILY SSF52129 123 355 7.64E-9 T 22-04-2016 IPR029030 Caspase-like domain SMGD1_RS06975 6e0fce7a7ec7a8beb394952f86bcc893 363 Gene3D G3DSA:3.40.50.1460 128 260 1.2E-7 T 22-04-2016 IPR029030 Caspase-like domain SMGD1_RS01550 d9f8cd153b2fd3e273ad787adf255b39 166 Pfam PF06271 RDD family 6 154 6.4E-24 T 22-04-2016 IPR010432 RDD SMGD1_RS01550 d9f8cd153b2fd3e273ad787adf255b39 166 PANTHER PTHR36115:SF1 1 159 9.4E-16 T 22-04-2016 SMGD1_RS01550 d9f8cd153b2fd3e273ad787adf255b39 166 PANTHER PTHR36115 1 159 9.4E-16 T 22-04-2016 SMGD1_RS10865 f09634a4c5bb39c313e6c8157736b228 332 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 5 332 5.4E-101 T 22-04-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 SMGD1_RS10865 f09634a4c5bb39c313e6c8157736b228 332 PANTHER PTHR30573 4 332 1.3E-104 T 22-04-2016 SMGD1_RS10865 f09634a4c5bb39c313e6c8157736b228 332 PANTHER PTHR30573:SF0 4 332 1.3E-104 T 22-04-2016 SMGD1_RS10865 f09634a4c5bb39c313e6c8157736b228 332 SUPERFAMILY SSF142754 7 332 1.11E-92 T 22-04-2016 SMGD1_RS10865 f09634a4c5bb39c313e6c8157736b228 332 Pfam PF02445 Quinolinate synthetase A protein 11 331 3.0E-96 T 22-04-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 SMGD1_RS09930 55bd9e94e6fce7d3243328a7155b1743 250 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 55 69 - T 22-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMGD1_RS09930 55bd9e94e6fce7d3243328a7155b1743 250 PANTHER PTHR11079:SF60 8 250 1.4E-74 T 22-04-2016 SMGD1_RS09930 55bd9e94e6fce7d3243328a7155b1743 250 SUPERFAMILY SSF55120 4 237 9.6E-60 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMGD1_RS09930 55bd9e94e6fce7d3243328a7155b1743 250 PANTHER PTHR11079 8 250 1.4E-74 T 22-04-2016 SMGD1_RS09930 55bd9e94e6fce7d3243328a7155b1743 250 Pfam PF00849 RNA pseudouridylate synthase 16 175 4.6E-33 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMGD1_RS08640 281d0b4872f6de94c75673e92b58f05d 372 Pfam PF04773 FecR protein 54 155 1.6E-11 T 22-04-2016 IPR006860 FecR protein SMGD1_RS04740 6c03547c91ec7db98cd6c49d847aeb2f 134 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 5 22 7.0E-5 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 SMGD1_RS04740 6c03547c91ec7db98cd6c49d847aeb2f 134 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 39 55 7.0E-5 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 SMGD1_RS04740 6c03547c91ec7db98cd6c49d847aeb2f 134 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 102 117 7.0E-5 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 SMGD1_RS04740 6c03547c91ec7db98cd6c49d847aeb2f 134 PANTHER PTHR11717 3 129 6.6E-25 T 22-04-2016 SMGD1_RS04740 6c03547c91ec7db98cd6c49d847aeb2f 134 SUPERFAMILY SSF52788 3 124 4.45E-33 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily SMGD1_RS04740 6c03547c91ec7db98cd6c49d847aeb2f 134 SMART SM00226 3 130 1.4E-24 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily SMGD1_RS04740 6c03547c91ec7db98cd6c49d847aeb2f 134 Gene3D G3DSA:3.40.50.270 3 124 6.2E-35 T 22-04-2016 SMGD1_RS04740 6c03547c91ec7db98cd6c49d847aeb2f 134 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 5 122 1.1E-17 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily SMGD1_RS04740 6c03547c91ec7db98cd6c49d847aeb2f 134 PANTHER PTHR11717:SF18 3 129 6.6E-25 T 22-04-2016 SMGD1_RS10180 219b8f873fa1641276c1b5a48531fc5a 215 PANTHER PTHR13308 1 147 8.1E-18 T 22-04-2016 SMGD1_RS10180 219b8f873fa1641276c1b5a48531fc5a 215 PANTHER PTHR13308:SF11 1 147 8.1E-18 T 22-04-2016 SMGD1_RS10180 219b8f873fa1641276c1b5a48531fc5a 215 Pfam PF08433 Chromatin associated protein KTI12 12 148 1.0E-9 T 22-04-2016 IPR013641 Protein KTI12/L-seryl-tRNA(Sec) kinase SMGD1_RS10180 219b8f873fa1641276c1b5a48531fc5a 215 Gene3D G3DSA:3.40.50.300 4 147 1.0E-20 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS10180 219b8f873fa1641276c1b5a48531fc5a 215 SUPERFAMILY SSF52540 12 154 3.08E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS09245 b058e84192234bdb81e3b5a181a733fc 273 Gene3D G3DSA:3.40.50.300 23 257 3.6E-86 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS09245 b058e84192234bdb81e3b5a181a733fc 273 SUPERFAMILY SSF52540 46 230 4.54E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS09245 b058e84192234bdb81e3b5a181a733fc 273 PIRSF PIRSF028756 1 266 1.3E-92 T 22-04-2016 IPR016898 Polyphosphate kinase 2 SMGD1_RS09245 b058e84192234bdb81e3b5a181a733fc 273 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 23 241 7.7E-94 T 22-04-2016 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 SMGD1_RS09245 b058e84192234bdb81e3b5a181a733fc 273 PANTHER PTHR34383 24 236 9.4E-99 T 22-04-2016 SMGD1_RS09245 b058e84192234bdb81e3b5a181a733fc 273 PANTHER PTHR34383:SF1 24 236 9.4E-99 T 22-04-2016 SMGD1_RS09245 b058e84192234bdb81e3b5a181a733fc 273 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 22 240 2.6E-86 T 22-04-2016 IPR022488 Polyphosphate kinase-2-related SMGD1_RS12455 a8a17f607b544a86c842f73b9470933e 546 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 33 472 7.6E-58 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 SMGD1_RS12455 a8a17f607b544a86c842f73b9470933e 546 PANTHER PTHR11819 2 538 1.4E-82 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 SMGD1_RS12455 a8a17f607b544a86c842f73b9470933e 546 PANTHER PTHR11819:SF12 2 538 1.4E-82 T 22-04-2016 SMGD1_RS12455 a8a17f607b544a86c842f73b9470933e 546 Pfam PF00474 Sodium:solute symporter family 33 472 1.2E-58 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 SMGD1_RS10915 674d283a996f85fde48523734de6ade8 121 SUPERFAMILY SSF89919 7 101 4.19E-16 T 22-04-2016 IPR023799 Ribosome-binding factor A domain SMGD1_RS10915 674d283a996f85fde48523734de6ade8 121 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 5 115 5.3E-19 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 SMGD1_RS10915 674d283a996f85fde48523734de6ade8 121 Gene3D G3DSA:3.30.300.20 5 117 1.5E-17 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta SMGD1_RS10915 674d283a996f85fde48523734de6ade8 121 Pfam PF02033 Ribosome-binding factor A 8 110 2.3E-14 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 SMGD1_RS07485 b0f3cde8787b995e224c9ec63d2e2dc7 562 PANTHER PTHR21000 1 561 0.0 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SMGD1_RS07485 b0f3cde8787b995e224c9ec63d2e2dc7 562 SUPERFAMILY SSF52016 379 559 6.59E-60 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel SMGD1_RS07485 b0f3cde8787b995e224c9ec63d2e2dc7 562 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 14 559 2.6E-231 T 22-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SMGD1_RS07485 b0f3cde8787b995e224c9ec63d2e2dc7 562 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 119 129 - T 22-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SMGD1_RS07485 b0f3cde8787b995e224c9ec63d2e2dc7 562 SUPERFAMILY SSF143975 1 378 5.62E-132 T 22-04-2016 SMGD1_RS07485 b0f3cde8787b995e224c9ec63d2e2dc7 562 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 467 478 - T 22-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SMGD1_RS07485 b0f3cde8787b995e224c9ec63d2e2dc7 562 Pfam PF00920 Dehydratase family 31 556 2.1E-214 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SMGD1_RS07485 b0f3cde8787b995e224c9ec63d2e2dc7 562 PANTHER PTHR21000:SF11 1 561 0.0 T 22-04-2016 SMGD1_RS07485 b0f3cde8787b995e224c9ec63d2e2dc7 562 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 1 559 44.654 T 22-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SMGD1_RS14005 88239bf49f3477db7b0bf4a78ed465f7 189 PANTHER PTHR33706 27 165 4.7E-23 T 22-04-2016 SMGD1_RS14005 88239bf49f3477db7b0bf4a78ed465f7 189 SUPERFAMILY SSF82185 24 136 1.15E-22 T 22-04-2016 SMGD1_RS14005 88239bf49f3477db7b0bf4a78ed465f7 189 Gene3D G3DSA:2.20.110.10 24 135 9.7E-16 T 22-04-2016 SMGD1_RS14005 88239bf49f3477db7b0bf4a78ed465f7 189 PANTHER PTHR33706:SF1 27 165 4.7E-23 T 22-04-2016 SMGD1_RS14005 88239bf49f3477db7b0bf4a78ed465f7 189 Pfam PF07661 MORN repeat variant 142 159 0.013 T 22-04-2016 IPR011652 MORN variant SMGD1_RS14005 88239bf49f3477db7b0bf4a78ed465f7 189 Pfam PF07661 MORN repeat variant 92 110 0.0024 T 22-04-2016 IPR011652 MORN variant SMGD1_RS14005 88239bf49f3477db7b0bf4a78ed465f7 189 Pfam PF07661 MORN repeat variant 43 64 6.9E-4 T 22-04-2016 IPR011652 MORN variant SMGD1_RS14005 88239bf49f3477db7b0bf4a78ed465f7 189 Pfam PF07661 MORN repeat variant 68 85 0.041 T 22-04-2016 IPR011652 MORN variant SMGD1_RS14005 88239bf49f3477db7b0bf4a78ed465f7 189 Pfam PF07661 MORN repeat variant 117 136 0.0054 T 22-04-2016 IPR011652 MORN variant SMGD1_RS14005 88239bf49f3477db7b0bf4a78ed465f7 189 Pfam PF07661 MORN repeat variant 24 40 0.034 T 22-04-2016 IPR011652 MORN variant SMGD1_RS00585 43d6253304f37aa83adc76d95983e5ac 257 SUPERFAMILY SSF89155 6 205 6.02E-31 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone SMGD1_RS00585 43d6253304f37aa83adc76d95983e5ac 257 Gene3D G3DSA:1.10.3480.10 2 201 2.3E-23 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone SMGD1_RS00585 43d6253304f37aa83adc76d95983e5ac 257 Pfam PF02613 Nitrate reductase delta subunit 44 168 1.3E-12 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone SMGD1_RS00280 36197d840f31f3fb8ec31f2bf8515b6d 300 Pfam PF00753 Metallo-beta-lactamase superfamily 47 229 8.2E-17 T 22-04-2016 IPR001279 Metallo-beta-lactamase SMGD1_RS00280 36197d840f31f3fb8ec31f2bf8515b6d 300 PANTHER PTHR11935:SF5 3 280 2.8E-24 T 22-04-2016 SMGD1_RS00280 36197d840f31f3fb8ec31f2bf8515b6d 300 Gene3D G3DSA:3.60.15.10 21 252 1.7E-41 T 22-04-2016 IPR001279 Metallo-beta-lactamase SMGD1_RS00280 36197d840f31f3fb8ec31f2bf8515b6d 300 SUPERFAMILY SSF56281 7 289 3.08E-45 T 22-04-2016 IPR001279 Metallo-beta-lactamase SMGD1_RS00280 36197d840f31f3fb8ec31f2bf8515b6d 300 PANTHER PTHR11935 3 280 2.8E-24 T 22-04-2016 SMGD1_RS00280 36197d840f31f3fb8ec31f2bf8515b6d 300 SMART SM00849 48 229 2.4E-11 T 22-04-2016 IPR001279 Metallo-beta-lactamase SMGD1_RS10045 96efd842171d2697d019d50c5033c080 200 SUPERFAMILY SSF46565 50 184 1.02E-8 T 22-04-2016 IPR001623 DnaJ domain SMGD1_RS10045 96efd842171d2697d019d50c5033c080 200 Gene3D G3DSA:1.10.287.110 153 181 1.9E-5 T 22-04-2016 IPR001623 DnaJ domain SMGD1_RS10620 68a59ccd86f143fe2279d9c6a6832e53 611 SUPERFAMILY SSF82689 496 601 7.85E-18 T 22-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 SMGD1_RS10620 68a59ccd86f143fe2279d9c6a6832e53 611 SUPERFAMILY SSF82861 340 425 5.23E-12 T 22-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 SMGD1_RS10620 68a59ccd86f143fe2279d9c6a6832e53 611 Pfam PF00924 Mechanosensitive ion channel 384 590 2.0E-46 T 22-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 SMGD1_RS10620 68a59ccd86f143fe2279d9c6a6832e53 611 Gene3D G3DSA:2.30.30.60 443 492 1.4E-15 T 22-04-2016 SMGD1_RS10620 68a59ccd86f143fe2279d9c6a6832e53 611 Gene3D G3DSA:3.30.70.100 498 588 3.0E-11 T 22-04-2016 SMGD1_RS10620 68a59ccd86f143fe2279d9c6a6832e53 611 PANTHER PTHR30347 318 600 6.0E-69 T 22-04-2016 SMGD1_RS10620 68a59ccd86f143fe2279d9c6a6832e53 611 SUPERFAMILY SSF50182 427 493 1.63E-16 T 22-04-2016 IPR010920 LSM domain SMGD1_RS07855 9805b2b2fe5455f1af63d4f47f167426 181 Pfam PF02545 Maf-like protein 2 178 2.1E-24 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 SMGD1_RS07855 9805b2b2fe5455f1af63d4f47f167426 181 Gene3D G3DSA:3.90.950.10 2 177 1.4E-36 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like SMGD1_RS07855 9805b2b2fe5455f1af63d4f47f167426 181 TIGRFAM TIGR00172 maf: septum formation protein Maf 2 176 4.3E-36 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 SMGD1_RS07855 9805b2b2fe5455f1af63d4f47f167426 181 PIRSF PIRSF006305 1 181 1.3E-30 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 SMGD1_RS07855 9805b2b2fe5455f1af63d4f47f167426 181 SUPERFAMILY SSF52972 1 179 3.47E-38 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like SMGD1_RS14460 57244525441d4dccbdafb2c4209820c7 94 PANTHER PTHR33217 1 94 1.4E-52 T 22-04-2016 SMGD1_RS14460 57244525441d4dccbdafb2c4209820c7 94 Pfam PF00872 Transposase, Mutator family 1 94 7.0E-27 T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 SMGD1_RS05685 957a8051aad6b452ef175dc352972999 234 Gene3D G3DSA:1.10.10.10 163 233 4.9E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMGD1_RS05685 957a8051aad6b452ef175dc352972999 234 SUPERFAMILY SSF52172 15 194 2.42E-33 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS05685 957a8051aad6b452ef175dc352972999 234 Gene3D G3DSA:3.40.50.2300 14 162 1.7E-32 T 22-04-2016 SMGD1_RS05685 957a8051aad6b452ef175dc352972999 234 Pfam PF00486 Transcriptional regulatory protein, C terminal 163 233 7.8E-11 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMGD1_RS05685 957a8051aad6b452ef175dc352972999 234 SMART SM00448 16 128 7.3E-30 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS05685 957a8051aad6b452ef175dc352972999 234 Pfam PF00072 Response regulator receiver domain 19 128 4.1E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS05685 957a8051aad6b452ef175dc352972999 234 SMART SM00862 162 233 2.8E-6 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMGD1_RS05685 957a8051aad6b452ef175dc352972999 234 PANTHER PTHR26402 16 234 8.7E-41 T 22-04-2016 SMGD1_RS06935 e25f53f6a725e269c19f2efcd5e06624 382 Gene3D G3DSA:3.40.47.10 2 196 3.0E-31 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SMGD1_RS06935 e25f53f6a725e269c19f2efcd5e06624 382 SUPERFAMILY SSF53901 4 370 8.41E-29 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SMGD1_RS06935 e25f53f6a725e269c19f2efcd5e06624 382 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 286 364 9.0E-14 T 22-04-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 SMGD1_RS06935 e25f53f6a725e269c19f2efcd5e06624 382 PANTHER PTHR34069 60 167 8.1E-27 T 22-04-2016 SMGD1_RS06935 e25f53f6a725e269c19f2efcd5e06624 382 PANTHER PTHR34069 190 363 8.1E-27 T 22-04-2016 SMGD1_RS06935 e25f53f6a725e269c19f2efcd5e06624 382 PANTHER PTHR34069 1 43 8.1E-27 T 22-04-2016 SMGD1_RS06935 e25f53f6a725e269c19f2efcd5e06624 382 Pfam PF00108 Thiolase, N-terminal domain 63 168 8.0E-9 T 22-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 SMGD1_RS06935 e25f53f6a725e269c19f2efcd5e06624 382 Gene3D G3DSA:3.40.47.10 197 219 1.7E-27 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SMGD1_RS06935 e25f53f6a725e269c19f2efcd5e06624 382 Gene3D G3DSA:3.40.47.10 261 380 1.7E-27 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SMGD1_RS01870 32b966243036e048669b2f3e15f090f9 207 Gene3D G3DSA:1.25.10.10 17 184 5.8E-14 T 22-04-2016 IPR011989 Armadillo-like helical SMGD1_RS01870 32b966243036e048669b2f3e15f090f9 207 Pfam PF13646 HEAT repeats 124 183 4.6E-10 T 22-04-2016 SMGD1_RS01870 32b966243036e048669b2f3e15f090f9 207 SUPERFAMILY SSF48371 22 185 4.61E-12 T 22-04-2016 IPR016024 Armadillo-type fold GO:0005488 SMGD1_RS11900 5edaea337224ca16ee4b4561dc2a6274 274 Pfam PF00146 NADH dehydrogenase 4 269 8.3E-43 T 22-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 SMGD1_RS11900 5edaea337224ca16ee4b4561dc2a6274 274 PANTHER PTHR11432 1 269 6.5E-27 T 22-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 SMGD1_RS14395 148837de20fd0de41d4ae319cfbde92f 628 Gene3D G3DSA:3.30.70.270 470 624 4.1E-45 T 22-04-2016 SMGD1_RS14395 148837de20fd0de41d4ae319cfbde92f 628 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 464 624 7.4E-47 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS14395 148837de20fd0de41d4ae319cfbde92f 628 SUPERFAMILY SSF55073 473 623 1.41E-43 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS14395 148837de20fd0de41d4ae319cfbde92f 628 SUPERFAMILY SSF55785 342 458 3.49E-13 T 22-04-2016 IPR000014 PAS domain SMGD1_RS14395 148837de20fd0de41d4ae319cfbde92f 628 SMART SM00086 415 457 7.7E-6 T 22-04-2016 IPR001610 PAC motif SMGD1_RS14395 148837de20fd0de41d4ae319cfbde92f 628 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 356 464 7.3E-7 T 22-04-2016 IPR000014 PAS domain SMGD1_RS14395 148837de20fd0de41d4ae319cfbde92f 628 Pfam PF00990 Diguanylate cyclase, GGDEF domain 469 620 3.7E-42 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS14395 148837de20fd0de41d4ae319cfbde92f 628 Gene3D G3DSA:3.30.450.20 341 469 4.2E-16 T 22-04-2016 SMGD1_RS14395 148837de20fd0de41d4ae319cfbde92f 628 PANTHER PTHR10799:SF750 501 626 8.4E-21 T 22-04-2016 SMGD1_RS14395 148837de20fd0de41d4ae319cfbde92f 628 PANTHER PTHR10799 501 626 8.4E-21 T 22-04-2016 SMGD1_RS14395 148837de20fd0de41d4ae319cfbde92f 628 SUPERFAMILY SSF103190 49 205 7.06E-40 T 22-04-2016 IPR029151 Periplasmic sensor domain-like SMGD1_RS14395 148837de20fd0de41d4ae319cfbde92f 628 Pfam PF08447 PAS fold 364 450 7.2E-14 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 SMGD1_RS14395 148837de20fd0de41d4ae319cfbde92f 628 Gene3D G3DSA:3.30.450.20 81 204 1.4E-38 T 22-04-2016 SMGD1_RS14395 148837de20fd0de41d4ae319cfbde92f 628 SMART SM00267 457 625 5.1E-49 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS11145 957217c94ad7c2f669b734ca7d068efa 222 SMART SM00448 2 112 2.6E-36 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS11145 957217c94ad7c2f669b734ca7d068efa 222 PANTHER PTHR26402 2 219 7.1E-69 T 22-04-2016 SMGD1_RS11145 957217c94ad7c2f669b734ca7d068efa 222 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 219 1.2E-17 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMGD1_RS11145 957217c94ad7c2f669b734ca7d068efa 222 Gene3D G3DSA:1.10.10.10 145 220 6.4E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMGD1_RS11145 957217c94ad7c2f669b734ca7d068efa 222 Pfam PF00072 Response regulator receiver domain 4 113 6.1E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS11145 957217c94ad7c2f669b734ca7d068efa 222 SMART SM00862 143 219 3.9E-14 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMGD1_RS11145 957217c94ad7c2f669b734ca7d068efa 222 PANTHER PTHR26402:SF614 2 219 7.1E-69 T 22-04-2016 SMGD1_RS11145 957217c94ad7c2f669b734ca7d068efa 222 SUPERFAMILY SSF46894 129 220 2.04E-20 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SMGD1_RS11145 957217c94ad7c2f669b734ca7d068efa 222 SUPERFAMILY SSF52172 2 126 3.98E-39 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS11145 957217c94ad7c2f669b734ca7d068efa 222 Gene3D G3DSA:3.40.50.2300 1 144 2.0E-39 T 22-04-2016 SMGD1_RS02860 1edae8e86a190c7f51cc6a9c26f8f95c 114 PANTHER PTHR33747:SF1 45 114 2.5E-12 T 22-04-2016 SMGD1_RS02860 1edae8e86a190c7f51cc6a9c26f8f95c 114 SUPERFAMILY SSF103642 94 114 2.62E-7 T 22-04-2016 SMGD1_RS02860 1edae8e86a190c7f51cc6a9c26f8f95c 114 Pfam PF02810 SEC-C motif 97 114 3.6E-9 T 22-04-2016 IPR004027 SEC-C motif SMGD1_RS02860 1edae8e86a190c7f51cc6a9c26f8f95c 114 PANTHER PTHR33747 45 114 2.5E-12 T 22-04-2016 SMGD1_RS02860 1edae8e86a190c7f51cc6a9c26f8f95c 114 SUPERFAMILY SSF54427 2 90 2.72E-24 T 22-04-2016 IPR032710 NTF2-like domain SMGD1_RS02860 1edae8e86a190c7f51cc6a9c26f8f95c 114 Gene3D G3DSA:3.10.450.50 2 114 1.7E-36 T 22-04-2016 IPR032710 NTF2-like domain SMGD1_RS04825 fe360727dbb9c0c6a092a4b667544d53 97 SUPERFAMILY SSF48600 4 89 2.29E-19 T 22-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 SMGD1_RS04825 fe360727dbb9c0c6a092a4b667544d53 97 Pfam PF01817 Chorismate mutase type II 11 87 1.6E-13 T 22-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 SMGD1_RS04825 fe360727dbb9c0c6a092a4b667544d53 97 SMART SM00830 11 90 1.5E-15 T 22-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 SMGD1_RS04825 fe360727dbb9c0c6a092a4b667544d53 97 Gene3D G3DSA:1.20.59.10 4 87 2.2E-12 T 22-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 SMGD1_RS06955 592004df0989dfc1e5150fe62621a95c 97 SUPERFAMILY SSF54637 21 83 2.98E-8 T 22-04-2016 IPR029069 HotDog domain SMGD1_RS06955 592004df0989dfc1e5150fe62621a95c 97 Gene3D G3DSA:3.10.129.10 3 78 4.3E-8 T 22-04-2016 IPR029069 HotDog domain SMGD1_RS10085 aeade3de4b945776808242e7dd8d4f13 144 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 2 89 1.3E-14 T 22-04-2016 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 SMGD1_RS10085 aeade3de4b945776808242e7dd8d4f13 144 SUPERFAMILY SSF160246 3 86 8.37E-10 T 22-04-2016 SMGD1_RS10335 b949a8c74279e42b42e4b6b7b3cfe8ba 86 Hamap MF_00580 10 kDa chaperonin [groS]. 2 86 19.377 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SMGD1_RS10335 b949a8c74279e42b42e4b6b7b3cfe8ba 86 SUPERFAMILY SSF50129 1 85 1.77E-23 T 22-04-2016 IPR011032 GroES-like SMGD1_RS10335 b949a8c74279e42b42e4b6b7b3cfe8ba 86 Pfam PF00166 Chaperonin 10 Kd subunit 2 85 6.4E-24 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SMGD1_RS10335 b949a8c74279e42b42e4b6b7b3cfe8ba 86 SMART SM00883 2 85 1.6E-37 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SMGD1_RS10335 b949a8c74279e42b42e4b6b7b3cfe8ba 86 PANTHER PTHR10772 1 85 5.0E-25 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SMGD1_RS10335 b949a8c74279e42b42e4b6b7b3cfe8ba 86 Gene3D G3DSA:2.30.33.40 1 85 1.3E-23 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SMGD1_RS10335 b949a8c74279e42b42e4b6b7b3cfe8ba 86 PRINTS PR00297 10kDa chaperonin signature 51 63 1.8E-22 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SMGD1_RS10335 b949a8c74279e42b42e4b6b7b3cfe8ba 86 PRINTS PR00297 10kDa chaperonin signature 3 18 1.8E-22 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SMGD1_RS10335 b949a8c74279e42b42e4b6b7b3cfe8ba 86 PRINTS PR00297 10kDa chaperonin signature 72 85 1.8E-22 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SMGD1_RS10335 b949a8c74279e42b42e4b6b7b3cfe8ba 86 PRINTS PR00297 10kDa chaperonin signature 25 46 1.8E-22 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SMGD1_RS05325 db7f635a29e028455386f1415d4607de 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 279 297 6.6E-19 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SMGD1_RS05325 db7f635a29e028455386f1415d4607de 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 122 130 6.6E-19 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SMGD1_RS05325 db7f635a29e028455386f1415d4607de 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 6 28 6.6E-19 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SMGD1_RS05325 db7f635a29e028455386f1415d4607de 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 157 181 6.6E-19 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SMGD1_RS05325 db7f635a29e028455386f1415d4607de 321 Gene3D G3DSA:3.50.50.60 238 293 1.1E-6 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS05325 db7f635a29e028455386f1415d4607de 321 PANTHER PTHR22912 5 38 7.3E-19 T 22-04-2016 SMGD1_RS05325 db7f635a29e028455386f1415d4607de 321 PANTHER PTHR22912 62 291 7.3E-19 T 22-04-2016 SMGD1_RS05325 db7f635a29e028455386f1415d4607de 321 SUPERFAMILY SSF51905 1 314 2.05E-28 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS05325 db7f635a29e028455386f1415d4607de 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 161 179 8.1E-19 T 22-04-2016 SMGD1_RS05325 db7f635a29e028455386f1415d4607de 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 269 291 8.1E-19 T 22-04-2016 SMGD1_RS05325 db7f635a29e028455386f1415d4607de 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 8.1E-19 T 22-04-2016 SMGD1_RS05325 db7f635a29e028455386f1415d4607de 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 243 259 8.1E-19 T 22-04-2016 SMGD1_RS05325 db7f635a29e028455386f1415d4607de 321 Gene3D G3DSA:3.50.50.60 168 237 2.3E-11 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS05325 db7f635a29e028455386f1415d4607de 321 Gene3D G3DSA:3.50.50.60 7 167 5.7E-17 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS05325 db7f635a29e028455386f1415d4607de 321 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 9 288 1.2E-47 T 22-04-2016 SMGD1_RS02770 54318d78015b4d4562ab97a591d724e7 635 SUPERFAMILY SSF58104 314 536 7.32E-54 T 22-04-2016 SMGD1_RS02770 54318d78015b4d4562ab97a591d724e7 635 SUPERFAMILY SSF58104 242 268 7.32E-54 T 22-04-2016 SMGD1_RS02770 54318d78015b4d4562ab97a591d724e7 635 Pfam PF13682 Chemoreceptor zinc-binding domain 525 586 1.0E-11 T 22-04-2016 IPR025991 Chemoreceptor zinc-binding domain UniPathway: UPA00599 SMGD1_RS02770 54318d78015b4d4562ab97a591d724e7 635 Gene3D G3DSA:1.10.287.950 323 525 6.9E-50 T 22-04-2016 SMGD1_RS02770 54318d78015b4d4562ab97a591d724e7 635 SMART SM00283 310 557 2.2E-34 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SMGD1_RS02770 54318d78015b4d4562ab97a591d724e7 635 PANTHER PTHR32089 180 269 8.0E-60 T 22-04-2016 SMGD1_RS02770 54318d78015b4d4562ab97a591d724e7 635 PANTHER PTHR32089 295 516 8.0E-60 T 22-04-2016 SMGD1_RS02770 54318d78015b4d4562ab97a591d724e7 635 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 360 513 4.8E-40 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SMGD1_RS10985 c24b7cb538bdc1c7ec3067a8c5200ba8 291 PANTHER PTHR13696 21 276 3.4E-60 T 22-04-2016 SMGD1_RS10985 c24b7cb538bdc1c7ec3067a8c5200ba8 291 PANTHER PTHR13696:SF3 21 276 3.4E-60 T 22-04-2016 SMGD1_RS10985 c24b7cb538bdc1c7ec3067a8c5200ba8 291 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 27 233 4.4E-28 T 22-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain SMGD1_RS10985 c24b7cb538bdc1c7ec3067a8c5200ba8 291 Gene3D G3DSA:3.40.50.300 22 264 3.7E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS10985 c24b7cb538bdc1c7ec3067a8c5200ba8 291 PIRSF PIRSF003092 2 291 1.7E-66 T 22-04-2016 IPR025501 ATP binding protein MinD SMGD1_RS10985 c24b7cb538bdc1c7ec3067a8c5200ba8 291 SUPERFAMILY SSF52540 24 286 9.52E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS01455 02f45ffeef55b7da48e6740c42200503 370 PANTHER PTHR30474:SF1 5 369 5.4E-94 T 22-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 SMGD1_RS01455 02f45ffeef55b7da48e6740c42200503 370 Pfam PF01098 Cell cycle protein 8 356 1.0E-83 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 SMGD1_RS01455 02f45ffeef55b7da48e6740c42200503 370 PANTHER PTHR30474 5 369 5.4E-94 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 SMGD1_RS00290 1ace8098c05fe9fd386fb1c0e66ab20a 586 Gene3D G3DSA:3.60.21.10 42 64 8.1E-81 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SMGD1_RS00290 1ace8098c05fe9fd386fb1c0e66ab20a 586 Gene3D G3DSA:3.60.21.10 118 383 8.1E-81 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SMGD1_RS00290 1ace8098c05fe9fd386fb1c0e66ab20a 586 Gene3D G3DSA:3.90.780.10 385 573 7.2E-21 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 SMGD1_RS00290 1ace8098c05fe9fd386fb1c0e66ab20a 586 PANTHER PTHR11575 23 575 4.3E-166 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 SMGD1_RS00290 1ace8098c05fe9fd386fb1c0e66ab20a 586 SUPERFAMILY SSF55816 382 574 8.63E-32 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 SMGD1_RS00290 1ace8098c05fe9fd386fb1c0e66ab20a 586 Pfam PF02872 5'-nucleotidase, C-terminal domain 386 527 6.0E-17 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 SMGD1_RS00290 1ace8098c05fe9fd386fb1c0e66ab20a 586 PRINTS PR01607 Apyrase family signature 294 317 6.2E-14 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 SMGD1_RS00290 1ace8098c05fe9fd386fb1c0e66ab20a 586 PRINTS PR01607 Apyrase family signature 45 63 6.2E-14 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 SMGD1_RS00290 1ace8098c05fe9fd386fb1c0e66ab20a 586 PRINTS PR01607 Apyrase family signature 275 292 6.2E-14 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 SMGD1_RS00290 1ace8098c05fe9fd386fb1c0e66ab20a 586 PRINTS PR01607 Apyrase family signature 516 535 6.2E-14 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 SMGD1_RS00290 1ace8098c05fe9fd386fb1c0e66ab20a 586 PRINTS PR01607 Apyrase family signature 322 342 6.2E-14 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 SMGD1_RS00290 1ace8098c05fe9fd386fb1c0e66ab20a 586 TIGRFAM TIGR04486 thiosulf_SoxB: thiosulfohydrolase SoxB 4 573 6.1E-240 T 22-04-2016 IPR030998 Thiosulfohydrolase SoxB SMGD1_RS00290 1ace8098c05fe9fd386fb1c0e66ab20a 586 SUPERFAMILY SSF56300 118 383 9.81E-81 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SMGD1_RS00290 1ace8098c05fe9fd386fb1c0e66ab20a 586 SUPERFAMILY SSF56300 40 64 9.81E-81 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SMGD1_RS00290 1ace8098c05fe9fd386fb1c0e66ab20a 586 PANTHER PTHR11575:SF16 23 575 4.3E-166 T 22-04-2016 SMGD1_RS04470 5e15570636b5d5996b0e2c29b1f9ca6e 230 SUPERFAMILY SSF56808 3 222 8.24E-82 T 22-04-2016 IPR023674 Ribosomal protein L1-like SMGD1_RS04470 5e15570636b5d5996b0e2c29b1f9ca6e 230 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 1 226 42.368 T 22-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 SMGD1_RS04470 5e15570636b5d5996b0e2c29b1f9ca6e 230 ProSitePatterns PS01199 Ribosomal protein L1 signature. 118 136 - T 22-04-2016 IPR023673 Ribosomal protein L1, conserved site SMGD1_RS04470 5e15570636b5d5996b0e2c29b1f9ca6e 230 Gene3D G3DSA:3.30.190.20 158 223 5.4E-44 T 22-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 SMGD1_RS04470 5e15570636b5d5996b0e2c29b1f9ca6e 230 Gene3D G3DSA:3.30.190.20 14 65 5.4E-44 T 22-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 SMGD1_RS04470 5e15570636b5d5996b0e2c29b1f9ca6e 230 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 2 225 1.3E-101 T 22-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 SMGD1_RS04470 5e15570636b5d5996b0e2c29b1f9ca6e 230 PIRSF PIRSF002155 1 224 8.9E-79 T 22-04-2016 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 SMGD1_RS04470 5e15570636b5d5996b0e2c29b1f9ca6e 230 Pfam PF00687 Ribosomal protein L1p/L10e family 31 217 8.2E-55 T 22-04-2016 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein SMGD1_RS04470 5e15570636b5d5996b0e2c29b1f9ca6e 230 Gene3D G3DSA:3.40.50.790 66 156 1.3E-40 T 22-04-2016 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich SMGD1_RS04470 5e15570636b5d5996b0e2c29b1f9ca6e 230 PANTHER PTHR23105 18 228 7.0E-78 T 22-04-2016 SMGD1_RS04470 5e15570636b5d5996b0e2c29b1f9ca6e 230 PANTHER PTHR23105:SF5 18 228 7.0E-78 T 22-04-2016 SMGD1_RS03770 b97f0df3d0203a5003da64f9c7e00a04 99 PANTHER PTHR33473 12 99 2.2E-26 T 22-04-2016 SMGD1_RS03770 b97f0df3d0203a5003da64f9c7e00a04 99 Gene3D G3DSA:3.30.1390.10 5 99 1.1E-36 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like SMGD1_RS03770 b97f0df3d0203a5003da64f9c7e00a04 99 SUPERFAMILY SSF54736 14 98 1.67E-27 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like SMGD1_RS03770 b97f0df3d0203a5003da64f9c7e00a04 99 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 4 94 24.279 T 22-04-2016 IPR022935 ATP-dependent Clp protease adaptor protein ClpS SMGD1_RS03770 b97f0df3d0203a5003da64f9c7e00a04 99 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 16 94 3.5E-32 T 22-04-2016 IPR003769 Adaptor protein ClpS, core GO:0030163 SMGD1_RS02275 421f83059093047e31189cbcb3f78cb1 576 PANTHER PTHR10366 262 522 1.7E-117 T 22-04-2016 SMGD1_RS02275 421f83059093047e31189cbcb3f78cb1 576 Gene3D G3DSA:3.90.25.10 438 525 3.5E-9 T 22-04-2016 SMGD1_RS02275 421f83059093047e31189cbcb3f78cb1 576 Gene3D G3DSA:3.40.50.720 120 205 1.8E-9 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS02275 421f83059093047e31189cbcb3f78cb1 576 Pfam PF02719 Polysaccharide biosynthesis protein 263 536 7.1E-116 T 22-04-2016 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain SMGD1_RS02275 421f83059093047e31189cbcb3f78cb1 576 SUPERFAMILY SSF53335 95 309 9.63E-17 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS02275 421f83059093047e31189cbcb3f78cb1 576 Gene3D G3DSA:3.40.50.720 261 437 1.5E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS02275 421f83059093047e31189cbcb3f78cb1 576 SUPERFAMILY SSF51735 261 553 4.61E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS02275 421f83059093047e31189cbcb3f78cb1 576 PANTHER PTHR10366:SF256 262 522 1.7E-117 T 22-04-2016 SMGD1_RS01270 a450a50e9ebf6127f58438997f7b9f4a 181 SUPERFAMILY SSF54523 5 80 1.96E-10 T 22-04-2016 SMGD1_RS01270 a450a50e9ebf6127f58438997f7b9f4a 181 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 3 24 3.3E-5 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site SMGD1_RS01270 a450a50e9ebf6127f58438997f7b9f4a 181 Gene3D G3DSA:3.30.700.10 5 35 4.3E-4 T 22-04-2016 SMGD1_RS08365 403f38ac1c6d4917ece463824ec3581d 423 Pfam PF00817 impB/mucB/samB family 5 195 3.0E-48 T 22-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMGD1_RS08365 403f38ac1c6d4917ece463824ec3581d 423 SUPERFAMILY SSF56672 3 30 6.6E-51 T 22-04-2016 SMGD1_RS08365 403f38ac1c6d4917ece463824ec3581d 423 SUPERFAMILY SSF56672 80 249 6.6E-51 T 22-04-2016 SMGD1_RS08365 403f38ac1c6d4917ece463824ec3581d 423 Pfam PF11799 impB/mucB/samB family C-terminal domain 276 383 1.9E-6 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMGD1_RS08365 403f38ac1c6d4917ece463824ec3581d 423 Gene3D G3DSA:3.30.1490.100 281 386 8.9E-5 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMGD1_RS08365 403f38ac1c6d4917ece463824ec3581d 423 Gene3D G3DSA:3.30.70.270 109 204 1.5E-21 T 22-04-2016 SMGD1_RS08365 403f38ac1c6d4917ece463824ec3581d 423 Gene3D G3DSA:1.10.150.20 208 274 1.9E-9 T 22-04-2016 SMGD1_RS08365 403f38ac1c6d4917ece463824ec3581d 423 SUPERFAMILY SSF100879 279 367 1.92E-6 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMGD1_RS08365 403f38ac1c6d4917ece463824ec3581d 423 PANTHER PTHR11076 82 392 2.6E-67 T 22-04-2016 SMGD1_RS08365 403f38ac1c6d4917ece463824ec3581d 423 PANTHER PTHR11076 3 36 2.6E-67 T 22-04-2016 SMGD1_RS04280 92de5616b3824a989a76b8359bc2fec7 192 PANTHER PTHR31760 3 172 4.1E-37 T 22-04-2016 SMGD1_RS04280 92de5616b3824a989a76b8359bc2fec7 192 PIRSF PIRSF003078 2 188 1.3E-46 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 SMGD1_RS04280 92de5616b3824a989a76b8359bc2fec7 192 PANTHER PTHR31760:SF0 3 172 4.1E-37 T 22-04-2016 SMGD1_RS04280 92de5616b3824a989a76b8359bc2fec7 192 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 23 174 1.3E-43 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 SMGD1_RS04280 92de5616b3824a989a76b8359bc2fec7 192 SUPERFAMILY SSF53335 11 175 1.77E-28 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS04280 92de5616b3824a989a76b8359bc2fec7 192 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 11 189 24.34 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 SMGD1_RS04280 92de5616b3824a989a76b8359bc2fec7 192 Gene3D G3DSA:3.40.50.150 3 175 2.6E-45 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS04280 92de5616b3824a989a76b8359bc2fec7 192 Pfam PF02527 rRNA small subunit methyltransferase G 21 179 1.4E-43 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 SMGD1_RS04670 6c6a1ccc394999304bc1bd4bd2471751 116 Pfam PF01196 Ribosomal protein L17 20 116 6.2E-33 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS04670 6c6a1ccc394999304bc1bd4bd2471751 116 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 26.011 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS04670 6c6a1ccc394999304bc1bd4bd2471751 116 Gene3D G3DSA:3.90.1030.10 1 116 6.7E-46 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS04670 6c6a1ccc394999304bc1bd4bd2471751 116 SUPERFAMILY SSF64263 1 116 2.49E-44 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS04670 6c6a1ccc394999304bc1bd4bd2471751 116 PANTHER PTHR14413 1 116 5.1E-50 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS04670 6c6a1ccc394999304bc1bd4bd2471751 116 TIGRFAM TIGR00059 L17: ribosomal protein bL17 6 116 1.8E-45 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS02305 a750619c35395f5aaac154ed8162740d 344 PANTHER PTHR10366:SF360 279 330 1.6E-161 T 22-04-2016 SMGD1_RS02305 a750619c35395f5aaac154ed8162740d 344 PANTHER PTHR10366:SF360 6 260 1.6E-161 T 22-04-2016 SMGD1_RS02305 a750619c35395f5aaac154ed8162740d 344 Gene3D G3DSA:3.90.25.10 179 259 3.2E-8 T 22-04-2016 SMGD1_RS02305 a750619c35395f5aaac154ed8162740d 344 Pfam PF08485 Polysaccharide biosynthesis protein C-terminal 285 330 2.4E-17 T 22-04-2016 IPR013692 UDP-glucose 4-epimerase CapD, C-terminal domain GO:0003978|GO:0009103 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344 SMGD1_RS02305 a750619c35395f5aaac154ed8162740d 344 Gene3D G3DSA:3.40.50.720 7 178 2.2E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS02305 a750619c35395f5aaac154ed8162740d 344 SUPERFAMILY SSF51735 1 262 9.75E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS02305 a750619c35395f5aaac154ed8162740d 344 PANTHER PTHR10366 279 330 1.6E-161 T 22-04-2016 SMGD1_RS02305 a750619c35395f5aaac154ed8162740d 344 PANTHER PTHR10366 6 260 1.6E-161 T 22-04-2016 SMGD1_RS02305 a750619c35395f5aaac154ed8162740d 344 Pfam PF02719 Polysaccharide biosynthesis protein 7 282 5.6E-106 T 22-04-2016 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain SMGD1_RS13650 cc3677747f94c036ce176ea47a33e3f6 219 Pfam PF00717 Peptidase S24-like 135 200 7.6E-12 T 22-04-2016 IPR019759 Peptidase S24/S26A/S26B SMGD1_RS13650 cc3677747f94c036ce176ea47a33e3f6 219 ProSitePatterns PS00501 Signal peptidases I serine active site. 137 144 - T 22-04-2016 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: REACT_15380 SMGD1_RS13650 cc3677747f94c036ce176ea47a33e3f6 219 SUPERFAMILY SSF51306 87 213 1.83E-17 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C SMGD1_RS13650 cc3677747f94c036ce176ea47a33e3f6 219 Pfam PF07022 Bacteriophage CI repressor helix-turn-helix domain 26 72 2.1E-5 T 22-04-2016 IPR010744 Bacteriophage CI repressor GO:0003677|GO:0045892 SMGD1_RS13650 cc3677747f94c036ce176ea47a33e3f6 219 Gene3D G3DSA:2.10.109.10 94 213 2.2E-18 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain SMGD1_RS13650 cc3677747f94c036ce176ea47a33e3f6 219 PANTHER PTHR40661 86 212 4.6E-14 T 22-04-2016 SMGD1_RS13790 8470774176d0f47843e9a31e2b766100 397 SUPERFAMILY SSF52151 75 372 2.01E-35 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 SMGD1_RS13790 8470774176d0f47843e9a31e2b766100 397 Gene3D G3DSA:3.40.1090.10 71 386 2.5E-31 T 22-04-2016 SMGD1_RS13790 8470774176d0f47843e9a31e2b766100 397 PANTHER PTHR14226 76 259 2.4E-15 T 22-04-2016 SMGD1_RS13790 8470774176d0f47843e9a31e2b766100 397 Pfam PF01734 Patatin-like phospholipase 76 260 1.4E-20 T 22-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 SMGD1_RS14085 120dccc64ab8f0c5fec97fc4faa8fcda 242 TIGRFAM TIGR00374 TIGR00374: TIGR00374 family protein 18 222 3.0E-13 T 22-04-2016 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD SMGD1_RS14085 120dccc64ab8f0c5fec97fc4faa8fcda 242 PANTHER PTHR40277 9 236 1.3E-28 T 22-04-2016 SMGD1_RS14085 120dccc64ab8f0c5fec97fc4faa8fcda 242 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 9 228 3.2E-35 T 22-04-2016 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD SMGD1_RS10320 9dfb7928c92da6ed19105880b8d6fe22 101 Pfam PF11171 Protein of unknown function (DUF2958) 19 92 1.5E-15 T 22-04-2016 IPR021341 Protein of unknown function DUF2958 SMGD1_RS00185 c72f257c63cf2d5a9059e25b5e67c5a6 365 SUPERFAMILY SSF160387 64 167 5.49E-27 T 22-04-2016 SMGD1_RS00185 c72f257c63cf2d5a9059e25b5e67c5a6 365 Pfam PF05573 NosL 240 356 2.0E-35 T 22-04-2016 IPR008719 Nitrous oxide reductase accessory protein NosL SMGD1_RS00185 c72f257c63cf2d5a9059e25b5e67c5a6 365 Pfam PF05573 NosL 29 150 2.2E-18 T 22-04-2016 IPR008719 Nitrous oxide reductase accessory protein NosL SMGD1_RS00185 c72f257c63cf2d5a9059e25b5e67c5a6 365 PANTHER PTHR41247 212 365 6.2E-24 T 22-04-2016 SMGD1_RS00185 c72f257c63cf2d5a9059e25b5e67c5a6 365 SUPERFAMILY SSF160387 263 363 9.15E-26 T 22-04-2016 SMGD1_RS00565 441784bd1962152a0e39a1c4596dedf3 221 Gene3D G3DSA:1.10.10.10 156 220 1.2E-7 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMGD1_RS00565 441784bd1962152a0e39a1c4596dedf3 221 Pfam PF05732 Firmicute plasmid replication protein (RepL) 142 210 1.8E-5 T 22-04-2016 IPR008813 Plasmid replication protein, RepL GO:0006260|GO:0006276 SMGD1_RS00565 441784bd1962152a0e39a1c4596dedf3 221 Gene3D G3DSA:3.40.50.2300 11 136 5.3E-24 T 22-04-2016 SMGD1_RS00565 441784bd1962152a0e39a1c4596dedf3 221 PANTHER PTHR26402 12 124 6.2E-22 T 22-04-2016 SMGD1_RS00565 441784bd1962152a0e39a1c4596dedf3 221 SMART SM00448 12 124 2.7E-18 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS00565 441784bd1962152a0e39a1c4596dedf3 221 Pfam PF00072 Response regulator receiver domain 14 124 6.8E-20 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS00565 441784bd1962152a0e39a1c4596dedf3 221 SUPERFAMILY SSF52172 11 128 1.71E-25 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS05340 0c1562134a7ab812b4fd6260f6af829d 291 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 173 287 1.5E-20 T 22-04-2016 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 SMGD1_RS05340 0c1562134a7ab812b4fd6260f6af829d 291 Gene3D G3DSA:3.40.50.720 1 170 1.9E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS05340 0c1562134a7ab812b4fd6260f6af829d 291 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 139 1.0E-25 T 22-04-2016 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 SMGD1_RS05340 0c1562134a7ab812b4fd6260f6af829d 291 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 289 5.8E-58 T 22-04-2016 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0015940|GO:0016491|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 SMGD1_RS05340 0c1562134a7ab812b4fd6260f6af829d 291 PANTHER PTHR21708 1 290 4.9E-46 T 22-04-2016 SMGD1_RS05340 0c1562134a7ab812b4fd6260f6af829d 291 Gene3D G3DSA:1.10.1040.10 172 289 1.4E-28 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 SMGD1_RS05340 0c1562134a7ab812b4fd6260f6af829d 291 SUPERFAMILY SSF51735 1 148 1.98E-15 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS05340 0c1562134a7ab812b4fd6260f6af829d 291 PANTHER PTHR21708:SF26 1 290 4.9E-46 T 22-04-2016 SMGD1_RS05340 0c1562134a7ab812b4fd6260f6af829d 291 SUPERFAMILY SSF48179 172 288 7.48E-21 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SMGD1_RS10825 bf76136a26b78eb5badb20c2ef3a6b0a 276 SUPERFAMILY SSF51735 2 163 3.07E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS10825 bf76136a26b78eb5badb20c2ef3a6b0a 276 SUPERFAMILY SSF48179 169 275 2.04E-31 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SMGD1_RS10825 bf76136a26b78eb5badb20c2ef3a6b0a 276 Gene3D G3DSA:3.40.50.720 1 173 2.7E-30 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS10825 bf76136a26b78eb5badb20c2ef3a6b0a 276 Pfam PF02153 Prephenate dehydrogenase 15 266 1.1E-71 T 22-04-2016 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 SMGD1_RS10825 bf76136a26b78eb5badb20c2ef3a6b0a 276 PANTHER PTHR21363 1 275 1.7E-52 T 22-04-2016 SMGD1_RS10825 bf76136a26b78eb5badb20c2ef3a6b0a 276 PANTHER PTHR21363:SF0 1 275 1.7E-52 T 22-04-2016 SMGD1_RS06785 696a5efe86c0e0d279fdc61a5798acc1 171 Gene3D G3DSA:3.40.30.10 3 170 2.6E-40 T 22-04-2016 IPR012336 Thioredoxin-like fold SMGD1_RS06785 696a5efe86c0e0d279fdc61a5798acc1 171 Pfam PF08534 Redoxin 21 164 1.0E-17 T 22-04-2016 IPR013740 Redoxin GO:0016491 SMGD1_RS06785 696a5efe86c0e0d279fdc61a5798acc1 171 PANTHER PTHR10681:SF81 13 169 8.5E-36 T 22-04-2016 SMGD1_RS06785 696a5efe86c0e0d279fdc61a5798acc1 171 SUPERFAMILY SSF52833 4 165 4.39E-37 T 22-04-2016 IPR012336 Thioredoxin-like fold SMGD1_RS06785 696a5efe86c0e0d279fdc61a5798acc1 171 PANTHER PTHR10681 13 169 8.5E-36 T 22-04-2016 SMGD1_RS06785 696a5efe86c0e0d279fdc61a5798acc1 171 ProSitePatterns PS01265 Tpx family signature. 85 96 - T 22-04-2016 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 SMGD1_RS05240 ee33d2b7fd4f849766aa1cfba6f1969a 409 SUPERFAMILY SSF52402 67 202 1.54E-11 T 22-04-2016 SMGD1_RS05240 ee33d2b7fd4f849766aa1cfba6f1969a 409 Gene3D G3DSA:3.40.50.620 72 121 1.6E-4 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMGD1_RS05240 ee33d2b7fd4f849766aa1cfba6f1969a 409 TIGRFAM TIGR03573 WbuX: N-acetyl sugar amidotransferase 15 381 9.3E-110 T 22-04-2016 IPR020022 N-acetyl sugar amidotransferase SMGD1_RS05550 6212eadbb2627d0938688d0067eb097c 331 PANTHER PTHR30097:SF3 18 331 2.4E-47 T 22-04-2016 SMGD1_RS05550 6212eadbb2627d0938688d0067eb097c 331 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 133 327 9.6E-30 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 SMGD1_RS05550 6212eadbb2627d0938688d0067eb097c 331 Gene3D G3DSA:2.40.50.100 143 175 9.4E-5 T 22-04-2016 SMGD1_RS05550 6212eadbb2627d0938688d0067eb097c 331 Gene3D G3DSA:2.40.50.100 54 88 9.4E-5 T 22-04-2016 SMGD1_RS05550 6212eadbb2627d0938688d0067eb097c 331 SUPERFAMILY SSF111369 52 252 9.29E-12 T 22-04-2016 SMGD1_RS05550 6212eadbb2627d0938688d0067eb097c 331 PANTHER PTHR30097 18 331 2.4E-47 T 22-04-2016 SMGD1_RS05550 6212eadbb2627d0938688d0067eb097c 331 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 39 247 9.6E-52 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SMGD1_RS01875 69b7231136c790cbf164789d7744521a 351 SMART SM00448 3 123 1.2E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS01875 69b7231136c790cbf164789d7744521a 351 PANTHER PTHR24421:SF16 4 347 1.2E-101 T 22-04-2016 SMGD1_RS01875 69b7231136c790cbf164789d7744521a 351 SUPERFAMILY SSF52172 3 109 1.71E-29 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS01875 69b7231136c790cbf164789d7744521a 351 SUPERFAMILY SSF52738 161 349 6.15E-51 T 22-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 SMGD1_RS01875 69b7231136c790cbf164789d7744521a 351 PANTHER PTHR24421 4 347 1.2E-101 T 22-04-2016 SMGD1_RS01875 69b7231136c790cbf164789d7744521a 351 Gene3D G3DSA:3.40.50.180 160 350 3.1E-59 T 22-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 SMGD1_RS01875 69b7231136c790cbf164789d7744521a 351 Gene3D G3DSA:3.40.50.2300 4 125 1.4E-31 T 22-04-2016 SMGD1_RS01875 69b7231136c790cbf164789d7744521a 351 Pfam PF00072 Response regulator receiver domain 5 108 3.6E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS01875 69b7231136c790cbf164789d7744521a 351 Pfam PF01339 CheB methylesterase 166 346 6.0E-49 T 22-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 SMGD1_RS01875 69b7231136c790cbf164789d7744521a 351 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 3 351 32.01 T 22-04-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 SMGD1_RS01875 69b7231136c790cbf164789d7744521a 351 PIRSF PIRSF000876 2 351 1.3E-108 T 22-04-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 SMGD1_RS09895 27ee4436582953e24c5fc1c790bb14c9 427 SUPERFAMILY SSF46548 11 96 1.55E-16 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 SMGD1_RS09895 27ee4436582953e24c5fc1c790bb14c9 427 Pfam PF12838 4Fe-4S dicluster domain 18 81 1.7E-8 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SMGD1_RS09895 27ee4436582953e24c5fc1c790bb14c9 427 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 69 80 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SMGD1_RS09895 27ee4436582953e24c5fc1c790bb14c9 427 PANTHER PTHR32479 7 405 1.6E-58 T 22-04-2016 SMGD1_RS09895 27ee4436582953e24c5fc1c790bb14c9 427 Pfam PF02754 Cysteine-rich domain 182 267 2.3E-12 T 22-04-2016 IPR004017 Cysteine-rich domain SMGD1_RS09895 27ee4436582953e24c5fc1c790bb14c9 427 Pfam PF02754 Cysteine-rich domain 318 401 3.0E-11 T 22-04-2016 IPR004017 Cysteine-rich domain SMGD1_RS09895 27ee4436582953e24c5fc1c790bb14c9 427 PIRSF PIRSF000139 2 427 1.6E-111 T 22-04-2016 IPR012257 Glycolate oxidase, iron-sulphur subunit SMGD1_RS09895 27ee4436582953e24c5fc1c790bb14c9 427 PANTHER PTHR32479:SF13 7 405 1.6E-58 T 22-04-2016 SMGD1_RS09895 27ee4436582953e24c5fc1c790bb14c9 427 Gene3D G3DSA:1.10.1060.10 15 104 2.6E-16 T 22-04-2016 SMGD1_RS04955 bfd8d5ffb06178362aee48b8f3671c19 183 Pfam PF01351 Ribonuclease HII 5 175 1.7E-29 T 22-04-2016 IPR024567 Ribonuclease HII/HIII domain SMGD1_RS04955 bfd8d5ffb06178362aee48b8f3671c19 183 PANTHER PTHR10954 6 174 5.6E-47 T 22-04-2016 IPR001352 Ribonuclease HII/HIII GO:0003723|GO:0004523 SMGD1_RS04955 bfd8d5ffb06178362aee48b8f3671c19 183 Gene3D G3DSA:3.30.420.10 4 131 2.4E-28 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMGD1_RS04955 bfd8d5ffb06178362aee48b8f3671c19 183 SUPERFAMILY SSF53098 4 175 1.18E-51 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMGD1_RS10885 7250e7dbb38b04b29bb286c5a81f214a 455 SUPERFAMILY SSF51261 173 432 4.87E-42 T 22-04-2016 IPR011055 Duplicated hybrid motif SMGD1_RS10885 7250e7dbb38b04b29bb286c5a81f214a 455 PANTHER PTHR21666:SF200 251 454 7.4E-21 T 22-04-2016 SMGD1_RS10885 7250e7dbb38b04b29bb286c5a81f214a 455 PANTHER PTHR21666 251 454 7.4E-21 T 22-04-2016 SMGD1_RS10885 7250e7dbb38b04b29bb286c5a81f214a 455 Gene3D G3DSA:2.70.70.10 286 434 2.2E-29 T 22-04-2016 SMGD1_RS10885 7250e7dbb38b04b29bb286c5a81f214a 455 Pfam PF01551 Peptidase family M23 334 428 9.0E-19 T 22-04-2016 IPR016047 Peptidase M23 SMGD1_RS08455 76f89beb77436b28d5ab97fb5c8607c7 102 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 9 97 3.9E-22 T 22-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 SMGD1_RS08455 76f89beb77436b28d5ab97fb5c8607c7 102 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 4 102 19.344 T 22-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 SMGD1_RS08455 76f89beb77436b28d5ab97fb5c8607c7 102 PANTHER PTHR11434 6 102 2.6E-31 T 22-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 SMGD1_RS01985 3d40c6472991e16db52ea5f8dd9b4549 260 Gene3D G3DSA:3.40.50.150 89 241 3.5E-43 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS01985 3d40c6472991e16db52ea5f8dd9b4549 260 PANTHER PTHR24422 27 246 4.6E-40 T 22-04-2016 SMGD1_RS01985 3d40c6472991e16db52ea5f8dd9b4549 260 PRINTS PR00996 Glutamate methyltransferase family signature 83 95 2.7E-17 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SMGD1_RS01985 3d40c6472991e16db52ea5f8dd9b4549 260 PRINTS PR00996 Glutamate methyltransferase family signature 217 231 2.7E-17 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SMGD1_RS01985 3d40c6472991e16db52ea5f8dd9b4549 260 PRINTS PR00996 Glutamate methyltransferase family signature 149 165 2.7E-17 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SMGD1_RS01985 3d40c6472991e16db52ea5f8dd9b4549 260 PRINTS PR00996 Glutamate methyltransferase family signature 116 136 2.7E-17 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SMGD1_RS01985 3d40c6472991e16db52ea5f8dd9b4549 260 SUPERFAMILY SSF53335 90 237 6.33E-35 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS01985 3d40c6472991e16db52ea5f8dd9b4549 260 SMART SM00138 25 259 1.6E-35 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SMGD1_RS01985 3d40c6472991e16db52ea5f8dd9b4549 260 Pfam PF01739 CheR methyltransferase, SAM binding domain 90 260 6.5E-38 T 22-04-2016 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal SMGD1_RS10550 87521be790720ca1fa69c3fbe44f34bc 252 SUPERFAMILY SSF103088 152 251 1.83E-19 T 22-04-2016 IPR006665 OmpA-like domain SMGD1_RS10550 87521be790720ca1fa69c3fbe44f34bc 252 SUPERFAMILY SSF103647 47 77 5.62E-6 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 SMGD1_RS10550 87521be790720ca1fa69c3fbe44f34bc 252 PANTHER PTHR30128 153 251 2.7E-14 T 22-04-2016 SMGD1_RS10550 87521be790720ca1fa69c3fbe44f34bc 252 Pfam PF00691 OmpA family 154 245 2.7E-12 T 22-04-2016 IPR006665 OmpA-like domain SMGD1_RS10550 87521be790720ca1fa69c3fbe44f34bc 252 Gene3D G3DSA:3.30.1330.60 153 251 8.4E-20 T 22-04-2016 IPR006665 OmpA-like domain SMGD1_RS02825 25781d83ca648f7215568203712d5ad0 200 Pfam PF12118 SprA-related family 36 196 9.5E-33 T 22-04-2016 IPR021973 SprA-related family SMGD1_RS05520 aa077cb412b9e0c1ace2476dfe5b1830 215 SUPERFAMILY SSF46894 128 215 5.95E-16 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SMGD1_RS05520 aa077cb412b9e0c1ace2476dfe5b1830 215 Gene3D G3DSA:1.10.10.10 143 215 1.1E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMGD1_RS05520 aa077cb412b9e0c1ace2476dfe5b1830 215 SUPERFAMILY SSF52172 1 158 2.7E-31 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS05520 aa077cb412b9e0c1ace2476dfe5b1830 215 SMART SM00862 143 214 7.6E-17 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMGD1_RS05520 aa077cb412b9e0c1ace2476dfe5b1830 215 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 214 1.4E-17 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMGD1_RS05520 aa077cb412b9e0c1ace2476dfe5b1830 215 Pfam PF00072 Response regulator receiver domain 3 112 3.7E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS05520 aa077cb412b9e0c1ace2476dfe5b1830 215 SMART SM00448 1 111 3.2E-30 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS05520 aa077cb412b9e0c1ace2476dfe5b1830 215 Gene3D G3DSA:3.40.50.2300 1 142 1.3E-31 T 22-04-2016 SMGD1_RS05520 aa077cb412b9e0c1ace2476dfe5b1830 215 PANTHER PTHR26402 1 215 1.3E-49 T 22-04-2016 SMGD1_RS06750 eeaaca698decd5a6ab81c6f9da3302dc 565 Pfam PF00990 Diguanylate cyclase, GGDEF domain 175 306 3.4E-15 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS06750 eeaaca698decd5a6ab81c6f9da3302dc 565 SUPERFAMILY SSF52172 14 162 2.85E-34 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS06750 eeaaca698decd5a6ab81c6f9da3302dc 565 SUPERFAMILY SSF141868 335 559 3.01E-64 T 22-04-2016 IPR001633 EAL domain SMGD1_RS06750 eeaaca698decd5a6ab81c6f9da3302dc 565 Gene3D G3DSA:3.30.70.270 182 316 3.2E-22 T 22-04-2016 SMGD1_RS06750 eeaaca698decd5a6ab81c6f9da3302dc 565 SUPERFAMILY SSF55073 182 314 2.9E-20 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS06750 eeaaca698decd5a6ab81c6f9da3302dc 565 Pfam PF00563 EAL domain 337 559 8.9E-59 T 22-04-2016 IPR001633 EAL domain SMGD1_RS06750 eeaaca698decd5a6ab81c6f9da3302dc 565 Gene3D G3DSA:3.40.50.2300 14 156 2.6E-34 T 22-04-2016 SMGD1_RS06750 eeaaca698decd5a6ab81c6f9da3302dc 565 PANTHER PTHR33121:SF10 320 560 2.2E-53 T 22-04-2016 SMGD1_RS06750 eeaaca698decd5a6ab81c6f9da3302dc 565 PANTHER PTHR33121 320 560 2.2E-53 T 22-04-2016 SMGD1_RS06750 eeaaca698decd5a6ab81c6f9da3302dc 565 SMART SM00267 151 312 1.9E-7 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS06750 eeaaca698decd5a6ab81c6f9da3302dc 565 Gene3D G3DSA:3.20.20.450 333 559 4.2E-62 T 22-04-2016 IPR001633 EAL domain SMGD1_RS06750 eeaaca698decd5a6ab81c6f9da3302dc 565 SMART SM00448 16 127 7.3E-30 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS06750 eeaaca698decd5a6ab81c6f9da3302dc 565 SMART SM00052 324 564 1.0E-56 T 22-04-2016 IPR001633 EAL domain SMGD1_RS06750 eeaaca698decd5a6ab81c6f9da3302dc 565 Pfam PF00072 Response regulator receiver domain 18 125 2.3E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS06750 eeaaca698decd5a6ab81c6f9da3302dc 565 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 181 312 7.1E-13 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS10300 3ec82e65eaf453b2f810e5b9613414d2 319 Pfam PF13280 WYL domain 160 305 2.3E-13 T 22-04-2016 IPR026881 WYL domain SMGD1_RS02085 d6d6cc0b70a0735fb9978f385e900120 649 PANTHER PTHR11804:SF8 19 648 2.9E-227 T 22-04-2016 SMGD1_RS02085 d6d6cc0b70a0735fb9978f385e900120 649 Gene3D G3DSA:1.10.1370.10 477 648 1.2E-118 T 22-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 SMGD1_RS02085 d6d6cc0b70a0735fb9978f385e900120 649 Gene3D G3DSA:1.10.1370.10 130 323 1.2E-118 T 22-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 SMGD1_RS02085 d6d6cc0b70a0735fb9978f385e900120 649 Gene3D G3DSA:1.20.1050.40 5 128 3.5E-19 T 22-04-2016 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal SMGD1_RS02085 d6d6cc0b70a0735fb9978f385e900120 649 PANTHER PTHR11804 19 648 2.9E-227 T 22-04-2016 SMGD1_RS02085 d6d6cc0b70a0735fb9978f385e900120 649 Gene3D G3DSA:3.40.390.10 335 476 3.6E-46 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 SMGD1_RS02085 d6d6cc0b70a0735fb9978f385e900120 649 Pfam PF01432 Peptidase family M3 211 644 1.2E-116 T 22-04-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 SMGD1_RS02085 d6d6cc0b70a0735fb9978f385e900120 649 SUPERFAMILY SSF55486 5 646 1.41E-162 T 22-04-2016 SMGD1_RS11345 8933cca962e0bebdcd0fa7a3cfd50deb 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 182 200 7.4E-33 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SMGD1_RS11345 8933cca962e0bebdcd0fa7a3cfd50deb 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 161 181 7.4E-33 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SMGD1_RS11345 8933cca962e0bebdcd0fa7a3cfd50deb 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 227 245 7.4E-33 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SMGD1_RS11345 8933cca962e0bebdcd0fa7a3cfd50deb 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 210 225 7.4E-33 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SMGD1_RS11345 8933cca962e0bebdcd0fa7a3cfd50deb 366 Pfam PF01018 GTP1/OBG 2 157 1.3E-54 T 22-04-2016 IPR006169 GTP1/OBG domain GO:0005525 SMGD1_RS11345 8933cca962e0bebdcd0fa7a3cfd50deb 366 Pfam PF01926 50S ribosome-binding GTPase 160 267 4.3E-24 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SMGD1_RS11345 8933cca962e0bebdcd0fa7a3cfd50deb 366 PANTHER PTHR11702:SF3 2 305 1.5E-125 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 SMGD1_RS11345 8933cca962e0bebdcd0fa7a3cfd50deb 366 PANTHER PTHR11702:SF3 333 362 1.5E-125 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 SMGD1_RS11345 8933cca962e0bebdcd0fa7a3cfd50deb 366 Gene3D G3DSA:3.40.50.300 159 286 8.6E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS11345 8933cca962e0bebdcd0fa7a3cfd50deb 366 Gene3D G3DSA:3.40.50.300 336 362 8.6E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS11345 8933cca962e0bebdcd0fa7a3cfd50deb 366 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 2 299 1.8E-119 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 SMGD1_RS11345 8933cca962e0bebdcd0fa7a3cfd50deb 366 SUPERFAMILY SSF82051 1 157 1.44E-50 T 22-04-2016 IPR006169 GTP1/OBG domain GO:0005525 SMGD1_RS11345 8933cca962e0bebdcd0fa7a3cfd50deb 366 PANTHER PTHR11702 2 305 1.5E-125 T 22-04-2016 SMGD1_RS11345 8933cca962e0bebdcd0fa7a3cfd50deb 366 PANTHER PTHR11702 333 362 1.5E-125 T 22-04-2016 SMGD1_RS11345 8933cca962e0bebdcd0fa7a3cfd50deb 366 Gene3D G3DSA:2.70.210.12 1 154 7.1E-53 T 22-04-2016 IPR006169 GTP1/OBG domain GO:0005525 SMGD1_RS11345 8933cca962e0bebdcd0fa7a3cfd50deb 366 SUPERFAMILY SSF52540 332 363 4.33E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS11345 8933cca962e0bebdcd0fa7a3cfd50deb 366 SUPERFAMILY SSF52540 152 302 4.33E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS11345 8933cca962e0bebdcd0fa7a3cfd50deb 366 Hamap MF_01454 GTPase Obg [obg]. 1 362 43.73 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 SMGD1_RS12410 e2b52fedffd9bb93e564f70398b55d7e 260 PANTHER PTHR24321 4 259 4.7E-24 T 22-04-2016 SMGD1_RS12410 e2b52fedffd9bb93e564f70398b55d7e 260 SUPERFAMILY SSF51735 7 258 1.4E-61 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS12410 e2b52fedffd9bb93e564f70398b55d7e 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 184 2.8E-25 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMGD1_RS12410 e2b52fedffd9bb93e564f70398b55d7e 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 221 241 2.8E-25 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMGD1_RS12410 e2b52fedffd9bb93e564f70398b55d7e 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 2.8E-25 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMGD1_RS12410 e2b52fedffd9bb93e564f70398b55d7e 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 2.8E-25 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMGD1_RS12410 e2b52fedffd9bb93e564f70398b55d7e 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 186 203 2.8E-25 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMGD1_RS12410 e2b52fedffd9bb93e564f70398b55d7e 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 155 2.8E-25 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMGD1_RS12410 e2b52fedffd9bb93e564f70398b55d7e 260 Gene3D G3DSA:3.40.50.720 5 259 5.2E-63 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS12410 e2b52fedffd9bb93e564f70398b55d7e 260 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 257 3.4E-54 T 22-04-2016 SMGD1_RS12410 e2b52fedffd9bb93e564f70398b55d7e 260 PANTHER PTHR24321:SF6 4 259 4.7E-24 T 22-04-2016 SMGD1_RS08515 05ad3ce08d45fd80e8d41e50ef7a4d62 203 PANTHER PTHR30353:SF13 1 187 7.6E-59 T 22-04-2016 SMGD1_RS08515 05ad3ce08d45fd80e8d41e50ef7a4d62 203 Pfam PF09335 SNARE associated Golgi protein 34 160 2.0E-21 T 22-04-2016 IPR032816 SNARE associated Golgi protein SMGD1_RS08515 05ad3ce08d45fd80e8d41e50ef7a4d62 203 PANTHER PTHR30353 1 187 7.6E-59 T 22-04-2016 IPR032818 DedA family SMGD1_RS11245 d7a3ec292255601a737688cc6be97cda 233 Gene3D G3DSA:1.20.950.20 19 233 7.6E-39 T 22-04-2016 SMGD1_RS11245 d7a3ec292255601a737688cc6be97cda 233 PANTHER PTHR30485:SF0 1 232 3.5E-38 T 22-04-2016 SMGD1_RS11245 d7a3ec292255601a737688cc6be97cda 233 Pfam PF01292 Prokaryotic cytochrome b561 21 226 1.0E-26 T 22-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 SMGD1_RS11245 d7a3ec292255601a737688cc6be97cda 233 PANTHER PTHR30485 1 232 3.5E-38 T 22-04-2016 SMGD1_RS11245 d7a3ec292255601a737688cc6be97cda 233 ProSitePatterns PS00882 Nickel-dependent hydrogenases b-type cytochrome subunit signature 1. 26 43 - T 22-04-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 SMGD1_RS11245 d7a3ec292255601a737688cc6be97cda 233 TIGRFAM TIGR02125 CytB-hydogenase: Ni/Fe-hydrogenase, b-type cytochrome subunit 20 231 3.7E-72 T 22-04-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 SMGD1_RS11245 d7a3ec292255601a737688cc6be97cda 233 SUPERFAMILY SSF81342 20 230 2.67E-32 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 SMGD1_RS11245 d7a3ec292255601a737688cc6be97cda 233 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 138 157 2.7E-23 T 22-04-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 SMGD1_RS11245 d7a3ec292255601a737688cc6be97cda 233 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 187 209 2.7E-23 T 22-04-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 SMGD1_RS11245 d7a3ec292255601a737688cc6be97cda 233 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 23 46 2.7E-23 T 22-04-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 SMGD1_RS11245 d7a3ec292255601a737688cc6be97cda 233 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 62 86 2.7E-23 T 22-04-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 SMGD1_RS11245 d7a3ec292255601a737688cc6be97cda 233 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 218 231 2.7E-23 T 22-04-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 SMGD1_RS13750 e3c529b50eff11b2c16b68d910af75bc 404 PANTHER PTHR30590:SF2 3 404 1.5E-83 T 22-04-2016 SMGD1_RS13750 e3c529b50eff11b2c16b68d910af75bc 404 PANTHER PTHR30590 3 404 1.5E-83 T 22-04-2016 SMGD1_RS13750 e3c529b50eff11b2c16b68d910af75bc 404 Pfam PF04235 Protein of unknown function (DUF418) 248 394 3.9E-34 T 22-04-2016 IPR007349 Domain of unknown function DUF418 SMGD1_RS01095 4bfed1d49b2c45a5765925338f6e22f3 348 Pfam PF08495 FIST N domain 43 189 1.2E-14 T 22-04-2016 IPR013702 FIST domain, N-terminal SMGD1_RS01095 4bfed1d49b2c45a5765925338f6e22f3 348 Pfam PF10442 FIST C domain 192 329 4.9E-22 T 22-04-2016 IPR019494 FIST, C-domain SMGD1_RS01095 4bfed1d49b2c45a5765925338f6e22f3 348 SMART SM01204 192 331 4.8E-27 T 22-04-2016 IPR019494 FIST, C-domain SMGD1_RS01095 4bfed1d49b2c45a5765925338f6e22f3 348 SMART SM00897 19 191 2.0E-4 T 22-04-2016 IPR013702 FIST domain, N-terminal SMGD1_RS07805 648cd6c6e750f23c3d55546e8112dab2 419 SUPERFAMILY SSF55021 341 409 3.31E-11 T 22-04-2016 SMGD1_RS07805 648cd6c6e750f23c3d55546e8112dab2 419 Gene3D G3DSA:3.30.360.10 142 292 5.6E-56 T 22-04-2016 SMGD1_RS07805 648cd6c6e750f23c3d55546e8112dab2 419 Gene3D G3DSA:3.40.50.720 1 141 4.5E-43 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS07805 648cd6c6e750f23c3d55546e8112dab2 419 PANTHER PTHR21499 1 360 3.9E-121 T 22-04-2016 SMGD1_RS07805 648cd6c6e750f23c3d55546e8112dab2 419 Pfam PF01842 ACT domain 342 407 4.7E-13 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 SMGD1_RS07805 648cd6c6e750f23c3d55546e8112dab2 419 Gene3D G3DSA:3.30.70.260 341 409 5.0E-10 T 22-04-2016 SMGD1_RS07805 648cd6c6e750f23c3d55546e8112dab2 419 SUPERFAMILY SSF51735 1 151 5.53E-34 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS07805 648cd6c6e750f23c3d55546e8112dab2 419 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 8 115 6.6E-15 T 22-04-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 SMGD1_RS07805 648cd6c6e750f23c3d55546e8112dab2 419 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 176 198 - T 22-04-2016 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 SMGD1_RS07805 648cd6c6e750f23c3d55546e8112dab2 419 PIRSF PIRSF000098 1 419 1.1E-155 T 22-04-2016 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 SMGD1_RS07805 648cd6c6e750f23c3d55546e8112dab2 419 SUPERFAMILY SSF55347 130 295 2.48E-53 T 22-04-2016 SMGD1_RS07805 648cd6c6e750f23c3d55546e8112dab2 419 PANTHER PTHR21499:SF2 1 360 3.9E-121 T 22-04-2016 SMGD1_RS07805 648cd6c6e750f23c3d55546e8112dab2 419 Pfam PF00742 Homoserine dehydrogenase 130 308 8.9E-62 T 22-04-2016 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 SMGD1_RS10405 1deff760dd342ab655d01567b69bcdbe 452 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 5 118 2.9E-23 T 22-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMGD1_RS10405 1deff760dd342ab655d01567b69bcdbe 452 PANTHER PTHR22573:SF28 3 448 6.2E-113 T 22-04-2016 SMGD1_RS10405 1deff760dd342ab655d01567b69bcdbe 452 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 93 102 - T 22-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMGD1_RS10405 1deff760dd342ab655d01567b69bcdbe 452 SUPERFAMILY SSF53738 255 343 3.61E-23 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMGD1_RS10405 1deff760dd342ab655d01567b69bcdbe 452 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 150 247 4.2E-21 T 22-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMGD1_RS10405 1deff760dd342ab655d01567b69bcdbe 452 Gene3D G3DSA:3.40.120.10 4 124 2.2E-26 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMGD1_RS10405 1deff760dd342ab655d01567b69bcdbe 452 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 255 354 5.6E-18 T 22-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMGD1_RS10405 1deff760dd342ab655d01567b69bcdbe 452 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 200 213 1.7E-22 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMGD1_RS10405 1deff760dd342ab655d01567b69bcdbe 452 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 228 243 1.7E-22 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMGD1_RS10405 1deff760dd342ab655d01567b69bcdbe 452 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 166 185 1.7E-22 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMGD1_RS10405 1deff760dd342ab655d01567b69bcdbe 452 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 92 106 1.7E-22 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMGD1_RS10405 1deff760dd342ab655d01567b69bcdbe 452 SUPERFAMILY SSF55957 356 448 9.42E-20 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMGD1_RS10405 1deff760dd342ab655d01567b69bcdbe 452 SUPERFAMILY SSF53738 149 249 1.57E-24 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMGD1_RS10405 1deff760dd342ab655d01567b69bcdbe 452 SUPERFAMILY SSF53738 3 173 1.61E-30 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMGD1_RS10405 1deff760dd342ab655d01567b69bcdbe 452 PANTHER PTHR22573 3 448 6.2E-113 T 22-04-2016 SMGD1_RS10405 1deff760dd342ab655d01567b69bcdbe 452 Gene3D G3DSA:3.30.310.50 358 450 4.6E-26 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMGD1_RS10405 1deff760dd342ab655d01567b69bcdbe 452 Gene3D G3DSA:3.40.120.10 251 356 2.2E-29 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMGD1_RS10405 1deff760dd342ab655d01567b69bcdbe 452 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 362 445 6.7E-12 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMGD1_RS10405 1deff760dd342ab655d01567b69bcdbe 452 Gene3D G3DSA:3.40.120.10 168 243 1.2E-23 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMGD1_RS08630 f147110ed3b28b9c1d531e642b2d07a9 436 Pfam PF04575 Protein of unknown function (DUF560) 152 436 4.8E-14 T 22-04-2016 IPR007655 Protein of unknown function DUF560 SMGD1_RS08630 f147110ed3b28b9c1d531e642b2d07a9 436 Pfam PF07719 Tetratricopeptide repeat 58 91 1.5E-5 T 22-04-2016 IPR013105 Tetratricopeptide repeat 2 SMGD1_RS08630 f147110ed3b28b9c1d531e642b2d07a9 436 Gene3D G3DSA:1.25.40.10 28 130 5.5E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS08630 f147110ed3b28b9c1d531e642b2d07a9 436 SUPERFAMILY SSF48452 24 124 2.66E-12 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS12015 4d8093196389b819ade8ca5bf901f09d 449 Pfam PF01474 Class-II DAHP synthetase family 4 441 1.1E-208 T 22-04-2016 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 SMGD1_RS12015 4d8093196389b819ade8ca5bf901f09d 449 TIGRFAM TIGR01358 DAHP_synth_II: 3-deoxy-7-phosphoheptulonate synthase 4 445 9.5E-218 T 22-04-2016 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 SMGD1_RS12015 4d8093196389b819ade8ca5bf901f09d 449 PANTHER PTHR21337 4 445 2.1E-298 T 22-04-2016 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 SMGD1_RS12015 4d8093196389b819ade8ca5bf901f09d 449 SUPERFAMILY SSF51569 3 445 1.61E-203 T 22-04-2016 SMGD1_RS01495 f517eaa1ee9071fbf9031ae4316d4fe3 362 PANTHER PTHR13939:SF0 210 354 5.3E-45 T 22-04-2016 SMGD1_RS01495 f517eaa1ee9071fbf9031ae4316d4fe3 362 Pfam PF02464 Competence-damaged protein 208 354 1.5E-48 T 22-04-2016 IPR008136 CinA, C-terminal SMGD1_RS01495 f517eaa1ee9071fbf9031ae4316d4fe3 362 SUPERFAMILY SSF142433 205 354 2.22E-46 T 22-04-2016 IPR008136 CinA, C-terminal SMGD1_RS01495 f517eaa1ee9071fbf9031ae4316d4fe3 362 PANTHER PTHR13939 210 354 5.3E-45 T 22-04-2016 SMGD1_RS01495 f517eaa1ee9071fbf9031ae4316d4fe3 362 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 210 353 4.2E-41 T 22-04-2016 IPR008136 CinA, C-terminal SMGD1_RS01495 f517eaa1ee9071fbf9031ae4316d4fe3 362 Gene3D G3DSA:3.90.950.20 205 354 6.0E-48 T 22-04-2016 IPR008136 CinA, C-terminal SMGD1_RS12440 2ff1166c9d7e307af8b220dec0b8c97a 180 PANTHER PTHR32154 1 178 3.8E-27 T 22-04-2016 SMGD1_RS12440 2ff1166c9d7e307af8b220dec0b8c97a 180 Gene3D G3DSA:3.40.920.10 1 178 1.1E-21 T 22-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 SMGD1_RS12440 2ff1166c9d7e307af8b220dec0b8c97a 180 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 11 173 1.0E-23 T 22-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 SMGD1_RS12440 2ff1166c9d7e307af8b220dec0b8c97a 180 PANTHER PTHR32154:SF22 1 178 3.8E-27 T 22-04-2016 SMGD1_RS12440 2ff1166c9d7e307af8b220dec0b8c97a 180 SUPERFAMILY SSF53323 1 178 8.11E-23 T 22-04-2016 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 SMGD1_RS08240 ffb00dcdb5e2df6eb4e19b639125b48b 285 PIRSF PIRSF006593 1 285 3.3E-84 T 22-04-2016 IPR014444 Uncharacterised conserved protein UCP006593 SMGD1_RS08240 ffb00dcdb5e2df6eb4e19b639125b48b 285 Pfam PF01937 Protein of unknown function DUF89 5 279 4.1E-56 T 22-04-2016 IPR002791 Domain of unknown function DUF89 SMGD1_RS08240 ffb00dcdb5e2df6eb4e19b639125b48b 285 SUPERFAMILY SSF111321 1 283 2.49E-80 T 22-04-2016 IPR002791 Domain of unknown function DUF89 SMGD1_RS04050 f8acaf866d3470b38c8a73d442b2f98d 294 Pfam PF09851 Short C-terminal domain 266 292 6.0E-7 T 22-04-2016 IPR018649 SHOCT domain SMGD1_RS04050 f8acaf866d3470b38c8a73d442b2f98d 294 Pfam PF13525 Outer membrane lipoprotein 34 183 6.5E-13 T 22-04-2016 SMGD1_RS13680 9f3b532c2ecbaec69f4b1e48a717865f 167 PANTHER PTHR11670:SF41 6 166 7.9E-64 T 22-04-2016 SMGD1_RS13680 9f3b532c2ecbaec69f4b1e48a717865f 167 Gene3D G3DSA:3.20.19.10 3 162 7.9E-35 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel SMGD1_RS13680 9f3b532c2ecbaec69f4b1e48a717865f 167 Pfam PF00694 Aconitase C-terminal domain 46 104 8.8E-20 T 22-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMGD1_RS13680 9f3b532c2ecbaec69f4b1e48a717865f 167 PANTHER PTHR11670 6 166 7.9E-64 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMGD1_RS13680 9f3b532c2ecbaec69f4b1e48a717865f 167 Hamap MF_01032 Methanogen homoaconitase small subunit [hacB]. 6 165 38.262 T 22-04-2016 IPR011827 Hydrolyase LeuD/HacB/DmdB GO:0008152|GO:0016836 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMGD1_RS13680 9f3b532c2ecbaec69f4b1e48a717865f 167 SUPERFAMILY SSF52016 6 163 6.67E-50 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel SMGD1_RS13680 9f3b532c2ecbaec69f4b1e48a717865f 167 TIGRFAM TIGR02087 LEUD_arch: 3-isopropylmalate dehydratase, small subunit 8 161 2.5E-60 T 22-04-2016 IPR011827 Hydrolyase LeuD/HacB/DmdB GO:0008152|GO:0016836 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMGD1_RS07295 7fc6c908afc2e136df5af3410be9050a 345 Pfam PF05343 M42 glutamyl aminopeptidase 150 334 8.4E-8 T 22-04-2016 IPR008007 Peptidase M42 SMGD1_RS07295 7fc6c908afc2e136df5af3410be9050a 345 SUPERFAMILY SSF53187 168 343 7.38E-16 T 22-04-2016 SMGD1_RS07295 7fc6c908afc2e136df5af3410be9050a 345 SUPERFAMILY SSF53187 6 77 7.38E-16 T 22-04-2016 SMGD1_RS07295 7fc6c908afc2e136df5af3410be9050a 345 Gene3D G3DSA:3.40.630.10 161 341 4.4E-19 T 22-04-2016 SMGD1_RS07295 7fc6c908afc2e136df5af3410be9050a 345 Gene3D G3DSA:3.40.630.10 3 69 4.4E-19 T 22-04-2016 SMGD1_RS03075 10bb95539257eb3f98d1556d6d8234af 170 Pfam PF01047 MarR family 59 118 2.1E-11 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SMGD1_RS03075 10bb95539257eb3f98d1556d6d8234af 170 PANTHER PTHR33164 2 161 3.5E-19 T 22-04-2016 SMGD1_RS03075 10bb95539257eb3f98d1556d6d8234af 170 SUPERFAMILY SSF46785 35 167 1.45E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMGD1_RS03075 10bb95539257eb3f98d1556d6d8234af 170 PRINTS PR00598 Bacterial regulatory protein MarR family signature 114 130 5.3E-14 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SMGD1_RS03075 10bb95539257eb3f98d1556d6d8234af 170 PRINTS PR00598 Bacterial regulatory protein MarR family signature 78 94 5.3E-14 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SMGD1_RS03075 10bb95539257eb3f98d1556d6d8234af 170 PRINTS PR00598 Bacterial regulatory protein MarR family signature 144 164 5.3E-14 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SMGD1_RS03075 10bb95539257eb3f98d1556d6d8234af 170 PRINTS PR00598 Bacterial regulatory protein MarR family signature 95 110 5.3E-14 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SMGD1_RS03075 10bb95539257eb3f98d1556d6d8234af 170 SMART SM00347 50 154 5.8E-20 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SMGD1_RS03075 10bb95539257eb3f98d1556d6d8234af 170 Gene3D G3DSA:1.10.10.10 34 168 1.9E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMGD1_RS07380 64672d95f150cd2de756be57302eae4f 142 ProSitePatterns PS00550 Hemerythrin family signature. 60 83 - T 22-04-2016 IPR016131 Haemerythrin, iron-binding site GO:0046872 SMGD1_RS07380 64672d95f150cd2de756be57302eae4f 142 SUPERFAMILY SSF47188 5 133 4.06E-22 T 22-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 SMGD1_RS07380 64672d95f150cd2de756be57302eae4f 142 PANTHER PTHR37164 4 133 5.1E-17 T 22-04-2016 SMGD1_RS07380 64672d95f150cd2de756be57302eae4f 142 Gene3D G3DSA:1.20.120.50 14 133 8.5E-21 T 22-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 SMGD1_RS07380 64672d95f150cd2de756be57302eae4f 142 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 16 133 1.1E-19 T 22-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 SMGD1_RS07380 64672d95f150cd2de756be57302eae4f 142 Pfam PF01814 Hemerythrin HHE cation binding domain 18 127 3.1E-6 T 22-04-2016 IPR012312 Haemerythrin-like SMGD1_RS03705 499485d6cfd780ee805ac0defab8c3a7 258 Gene3D G3DSA:3.40.50.10410 75 171 3.5E-14 T 22-04-2016 IPR023215 Nitrophenylphosphatase-like domain SMGD1_RS03705 499485d6cfd780ee805ac0defab8c3a7 258 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 3 226 1.2E-37 T 22-04-2016 IPR006357 HAD-superfamily hydrolase, subfamily IIA SMGD1_RS03705 499485d6cfd780ee805ac0defab8c3a7 258 Pfam PF13344 Haloacid dehalogenase-like hydrolase 3 99 1.6E-12 T 22-04-2016 IPR006357 HAD-superfamily hydrolase, subfamily IIA SMGD1_RS03705 499485d6cfd780ee805ac0defab8c3a7 258 Gene3D G3DSA:3.40.50.1000 172 257 5.0E-24 T 22-04-2016 IPR023214 HAD-like domain SMGD1_RS03705 499485d6cfd780ee805ac0defab8c3a7 258 Gene3D G3DSA:3.40.50.1000 2 74 5.0E-24 T 22-04-2016 IPR023214 HAD-like domain SMGD1_RS03705 499485d6cfd780ee805ac0defab8c3a7 258 PANTHER PTHR19288:SF43 3 258 8.6E-31 T 22-04-2016 SMGD1_RS03705 499485d6cfd780ee805ac0defab8c3a7 258 SUPERFAMILY SSF56784 2 254 2.95E-38 T 22-04-2016 IPR023214 HAD-like domain SMGD1_RS03705 499485d6cfd780ee805ac0defab8c3a7 258 Pfam PF13242 HAD-hyrolase-like 172 246 4.6E-12 T 22-04-2016 SMGD1_RS03705 499485d6cfd780ee805ac0defab8c3a7 258 PANTHER PTHR19288 3 258 8.6E-31 T 22-04-2016 SMGD1_RS04755 040391f74ef67d600944538ab8ddd32c 147 Gene3D G3DSA:3.40.250.10 37 123 2.7E-15 T 22-04-2016 IPR001763 Rhodanese-like domain SMGD1_RS04755 040391f74ef67d600944538ab8ddd32c 147 Pfam PF00581 Rhodanese-like domain 41 122 3.1E-8 T 22-04-2016 IPR001763 Rhodanese-like domain SMGD1_RS04755 040391f74ef67d600944538ab8ddd32c 147 SMART SM00450 37 131 6.6E-4 T 22-04-2016 IPR001763 Rhodanese-like domain SMGD1_RS04755 040391f74ef67d600944538ab8ddd32c 147 SUPERFAMILY SSF52821 36 123 9.69E-19 T 22-04-2016 IPR001763 Rhodanese-like domain SMGD1_RS04900 7fef719e76d16b3f0effc7c0e2aa65ee 62 Pfam PF00831 Ribosomal L29 protein 4 58 2.8E-15 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS04900 7fef719e76d16b3f0effc7c0e2aa65ee 62 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 22-04-2016 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS04900 7fef719e76d16b3f0effc7c0e2aa65ee 62 Gene3D G3DSA:1.10.287.310 1 58 1.8E-17 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS04900 7fef719e76d16b3f0effc7c0e2aa65ee 62 SUPERFAMILY SSF46561 1 58 6.67E-15 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS04900 7fef719e76d16b3f0effc7c0e2aa65ee 62 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 58 1.4E-16 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS04900 7fef719e76d16b3f0effc7c0e2aa65ee 62 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 14.681 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS11425 a2e2074c8bf2b868855c71c67d7ab2c0 416 Gene3D G3DSA:2.130.10.10 137 397 1.2E-30 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 SMGD1_RS11425 a2e2074c8bf2b868855c71c67d7ab2c0 416 SUPERFAMILY SSF69304 175 415 1.31E-26 T 22-04-2016 SMGD1_RS13430 08d363f5d5e87c56f01fe8c4439900e2 429 ProDom PD339107 ALGINATE ALG8 BIOSYNTHESIS TRANSFERASE TRANSMEMBRANE MEMBRANE 2.4.1.- GLYCOSYL GLYCOSYLTRANSFERASE PRECURSOR 29 262 3.0E-5 T 22-04-2016 SMGD1_RS13430 08d363f5d5e87c56f01fe8c4439900e2 429 TIGRFAM TIGR03937 PgaC_IcaA: poly-beta-1,6 N-acetyl-D-glucosamine synthase 16 421 7.9E-180 T 22-04-2016 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA GO:0008375|GO:0042710 KEGG: 00051+2.4.1.-|KEGG: 00512+2.4.1.-|KEGG: 00513+2.4.1.-|KEGG: 00514+2.4.1.-|KEGG: 00522+2.4.1.-|KEGG: 00533+2.4.1.-|KEGG: 00540+2.4.1.-|KEGG: 00550+2.4.1.-|KEGG: 00561+2.4.1.-|KEGG: 00563+2.4.1.-|KEGG: 00600+2.4.1.-|KEGG: 00601+2.4.1.-|KEGG: 00603+2.4.1.-|KEGG: 00604+2.4.1.-|KEGG: 00906+2.4.1.-|KEGG: 00908+2.4.1.-|KEGG: 00941+2.4.1.-|KEGG: 00942+2.4.1.-|KEGG: 00944+2.4.1.-|KEGG: 00945+2.4.1.-|KEGG: 00965+2.4.1.- SMGD1_RS13430 08d363f5d5e87c56f01fe8c4439900e2 429 Pfam PF13641 Glycosyltransferase like family 2 61 283 2.3E-32 T 22-04-2016 SMGD1_RS13430 08d363f5d5e87c56f01fe8c4439900e2 429 PANTHER PTHR10859:SF92 42 409 2.6E-107 T 22-04-2016 SMGD1_RS13430 08d363f5d5e87c56f01fe8c4439900e2 429 SUPERFAMILY SSF53448 46 329 4.19E-57 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMGD1_RS13430 08d363f5d5e87c56f01fe8c4439900e2 429 Gene3D G3DSA:3.90.550.10 61 301 3.1E-43 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMGD1_RS13430 08d363f5d5e87c56f01fe8c4439900e2 429 PANTHER PTHR10859 42 409 2.6E-107 T 22-04-2016 SMGD1_RS13630 a0c8934929e42762985aef82065071f0 167 SUPERFAMILY SSF48403 9 154 2.49E-30 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain SMGD1_RS13630 a0c8934929e42762985aef82065071f0 167 Gene3D G3DSA:1.25.40.20 16 160 3.0E-31 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain SMGD1_RS13630 a0c8934929e42762985aef82065071f0 167 Pfam PF13637 Ankyrin repeats (many copies) 37 87 1.2E-5 T 22-04-2016 SMGD1_RS13630 a0c8934929e42762985aef82065071f0 167 PANTHER PTHR24198 9 154 4.8E-27 T 22-04-2016 SMGD1_RS13630 a0c8934929e42762985aef82065071f0 167 SMART SM00248 32 62 16.0 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 SMGD1_RS13630 a0c8934929e42762985aef82065071f0 167 SMART SM00248 66 95 11.0 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 SMGD1_RS13630 a0c8934929e42762985aef82065071f0 167 SMART SM00248 100 129 9.3E-5 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 SMGD1_RS13630 a0c8934929e42762985aef82065071f0 167 Pfam PF13857 Ankyrin repeats (many copies) 97 141 1.7E-9 T 22-04-2016 SMGD1_RS04985 935e30d08b5a75bc2bdb2380326942a7 215 SUPERFAMILY SSF53850 2 212 1.66E-49 T 22-04-2016 SMGD1_RS04985 935e30d08b5a75bc2bdb2380326942a7 215 Gene3D G3DSA:3.40.190.10 79 138 3.6E-5 T 22-04-2016 SMGD1_RS04985 935e30d08b5a75bc2bdb2380326942a7 215 Gene3D G3DSA:3.40.190.10 3 72 2.7E-23 T 22-04-2016 SMGD1_RS04985 935e30d08b5a75bc2bdb2380326942a7 215 Gene3D G3DSA:3.40.190.10 139 213 2.7E-23 T 22-04-2016 SMGD1_RS04985 935e30d08b5a75bc2bdb2380326942a7 215 Pfam PF02621 Menaquinone biosynthesis 106 213 9.9E-12 T 22-04-2016 IPR003773 Menaquinone biosynthesis enzyme UniPathway: UPA00079 SMGD1_RS04985 935e30d08b5a75bc2bdb2380326942a7 215 Pfam PF02621 Menaquinone biosynthesis 3 88 1.5E-6 T 22-04-2016 IPR003773 Menaquinone biosynthesis enzyme UniPathway: UPA00079 SMGD1_RS04985 935e30d08b5a75bc2bdb2380326942a7 215 Hamap MF_00995 Chorismate dehydratase [mqnA]. 2 215 19.979 T 22-04-2016 IPR030868 Chorismate dehydratase GO:0009234|GO:0016829 KEGG: 00130+4.2.1.151|MetaCyc: PWY-7371|MetaCyc: PWY-7374|UniPathway: UPA00079 SMGD1_RS12000 91bf5421db195ec6dcc16d80292974be 158 Pfam PF01475 Ferric uptake regulator family 29 149 9.6E-39 T 22-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 SMGD1_RS12000 91bf5421db195ec6dcc16d80292974be 158 SUPERFAMILY SSF46785 21 153 2.45E-36 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMGD1_RS12000 91bf5421db195ec6dcc16d80292974be 158 Gene3D G3DSA:1.10.10.10 20 101 5.4E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMGD1_RS12000 91bf5421db195ec6dcc16d80292974be 158 PANTHER PTHR33202 13 158 6.2E-34 T 22-04-2016 SMGD1_RS02950 c0710a7f3ce6c3e90fab2fede4595b3e 426 PANTHER PTHR10804 2 421 3.9E-142 T 22-04-2016 SMGD1_RS02950 c0710a7f3ce6c3e90fab2fede4595b3e 426 SUPERFAMILY SSF55920 162 420 9.68E-72 T 22-04-2016 IPR000994 Peptidase M24, structural domain SMGD1_RS02950 c0710a7f3ce6c3e90fab2fede4595b3e 426 SMART SM01011 2 134 1.1E-42 T 22-04-2016 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 SMGD1_RS02950 c0710a7f3ce6c3e90fab2fede4595b3e 426 Pfam PF05195 Aminopeptidase P, N-terminal domain 7 123 3.4E-35 T 22-04-2016 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 SMGD1_RS02950 c0710a7f3ce6c3e90fab2fede4595b3e 426 Pfam PF00557 Metallopeptidase family M24 168 401 1.8E-58 T 22-04-2016 IPR000994 Peptidase M24, structural domain SMGD1_RS02950 c0710a7f3ce6c3e90fab2fede4595b3e 426 SUPERFAMILY SSF53092 2 161 5.23E-39 T 22-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal SMGD1_RS02950 c0710a7f3ce6c3e90fab2fede4595b3e 426 PANTHER PTHR10804:SF17 2 421 3.9E-142 T 22-04-2016 SMGD1_RS02950 c0710a7f3ce6c3e90fab2fede4595b3e 426 Gene3D G3DSA:3.40.350.10 2 165 1.3E-48 T 22-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal SMGD1_RS02950 c0710a7f3ce6c3e90fab2fede4595b3e 426 Gene3D G3DSA:3.90.230.10 166 421 1.7E-78 T 22-04-2016 IPR000994 Peptidase M24, structural domain SMGD1_RS06510 b37da2b10d065ea5565298a4b8c89b3a 165 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 4 165 20.366 T 22-04-2016 IPR007551 Protein of unknown function DUF520 SMGD1_RS06510 b37da2b10d065ea5565298a4b8c89b3a 165 Gene3D G3DSA:3.30.70.990 12 99 7.6E-25 T 22-04-2016 SMGD1_RS06510 b37da2b10d065ea5565298a4b8c89b3a 165 Gene3D G3DSA:3.30.70.860 100 165 1.9E-23 T 22-04-2016 SMGD1_RS06510 b37da2b10d065ea5565298a4b8c89b3a 165 Pfam PF04461 Protein of unknown function (DUF520) 6 165 2.1E-51 T 22-04-2016 IPR007551 Protein of unknown function DUF520 SMGD1_RS06510 b37da2b10d065ea5565298a4b8c89b3a 165 PANTHER PTHR30476 3 165 8.5E-44 T 22-04-2016 SMGD1_RS06510 b37da2b10d065ea5565298a4b8c89b3a 165 PANTHER PTHR30476:SF0 3 165 8.5E-44 T 22-04-2016 SMGD1_RS06510 b37da2b10d065ea5565298a4b8c89b3a 165 SUPERFAMILY SSF89963 5 92 3.92E-24 T 22-04-2016 IPR007551 Protein of unknown function DUF520 SMGD1_RS06510 b37da2b10d065ea5565298a4b8c89b3a 165 SUPERFAMILY SSF89963 94 165 3.4E-20 T 22-04-2016 IPR007551 Protein of unknown function DUF520 SMGD1_RS01100 f7989bb8144b56a34e19c966f28aacea 252 Pfam PF00072 Response regulator receiver domain 32 139 9.2E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS01100 f7989bb8144b56a34e19c966f28aacea 252 Gene3D G3DSA:3.40.50.2300 26 139 1.8E-27 T 22-04-2016 SMGD1_RS01100 f7989bb8144b56a34e19c966f28aacea 252 Gene3D G3DSA:1.10.10.10 157 249 1.7E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMGD1_RS01100 f7989bb8144b56a34e19c966f28aacea 252 SUPERFAMILY SSF52172 28 170 1.25E-27 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS01100 f7989bb8144b56a34e19c966f28aacea 252 PANTHER PTHR26402 30 248 2.5E-32 T 22-04-2016 SMGD1_RS01100 f7989bb8144b56a34e19c966f28aacea 252 SUPERFAMILY SSF46894 155 250 1.02E-16 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SMGD1_RS01100 f7989bb8144b56a34e19c966f28aacea 252 PANTHER PTHR26402:SF405 30 248 2.5E-32 T 22-04-2016 SMGD1_RS01100 f7989bb8144b56a34e19c966f28aacea 252 SMART SM00448 30 141 1.8E-20 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS01100 f7989bb8144b56a34e19c966f28aacea 252 Pfam PF00486 Transcriptional regulatory protein, C terminal 178 248 1.2E-12 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMGD1_RS01100 f7989bb8144b56a34e19c966f28aacea 252 SMART SM00862 177 248 2.4E-11 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMGD1_RS13635 1cfd2ac8e03d197094158c799c9d8a01 399 Pfam PF14789 Tetrahydrodipicolinate N-succinyltransferase middle 177 217 2.8E-16 T 22-04-2016 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain KEGG: 00300+2.3.1.117|UniPathway: UPA00034 SMGD1_RS13635 1cfd2ac8e03d197094158c799c9d8a01 399 Gene3D G3DSA:3.30.60.70 177 217 1.9E-21 T 22-04-2016 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain KEGG: 00300+2.3.1.117|UniPathway: UPA00034 SMGD1_RS13635 1cfd2ac8e03d197094158c799c9d8a01 399 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 300 332 2.9E-13 T 22-04-2016 IPR001451 Hexapeptide repeat SMGD1_RS13635 1cfd2ac8e03d197094158c799c9d8a01 399 Pfam PF14790 Tetrahydrodipicolinate N-succinyltransferase N-terminal 8 175 9.7E-68 T 22-04-2016 SMGD1_RS13635 1cfd2ac8e03d197094158c799c9d8a01 399 Gene3D G3DSA:2.160.10.10 225 399 1.1E-31 T 22-04-2016 SMGD1_RS13635 1cfd2ac8e03d197094158c799c9d8a01 399 SUPERFAMILY SSF51161 131 339 1.07E-36 T 22-04-2016 IPR011004 Trimeric LpxA-like SMGD1_RS13635 1cfd2ac8e03d197094158c799c9d8a01 399 Hamap MF_02122 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 24 399 43.504 T 22-04-2016 IPR026586 Type 2 tetrahydrodipicolinate N-succinyltransferase family GO:0008666 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 SMGD1_RS13265 ee213255b0175e2b81d7aa6b03fcaf86 400 Pfam PF12704 MacB-like periplasmic core domain 28 207 5.8E-8 T 22-04-2016 IPR025857 MacB-like periplasmic core domain SMGD1_RS13265 ee213255b0175e2b81d7aa6b03fcaf86 400 Pfam PF02687 FtsX-like permease family 268 390 2.1E-16 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 SMGD1_RS13265 ee213255b0175e2b81d7aa6b03fcaf86 400 PANTHER PTHR30489 8 400 9.5E-49 T 22-04-2016 SMGD1_RS10845 3c0bfddb0fac5333dec82f962db6460e 432 SMART SM00388 207 273 5.2E-4 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS10845 3c0bfddb0fac5333dec82f962db6460e 432 PANTHER PTHR24423 1 8 9.4E-35 T 22-04-2016 SMGD1_RS10845 3c0bfddb0fac5333dec82f962db6460e 432 PANTHER PTHR24423 186 411 9.4E-35 T 22-04-2016 SMGD1_RS10845 3c0bfddb0fac5333dec82f962db6460e 432 SUPERFAMILY SSF55874 281 410 6.42E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS10845 3c0bfddb0fac5333dec82f962db6460e 432 SUPERFAMILY SSF47384 192 272 4.9E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS10845 3c0bfddb0fac5333dec82f962db6460e 432 Pfam PF00512 His Kinase A (phospho-acceptor) domain 209 272 1.8E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS10845 3c0bfddb0fac5333dec82f962db6460e 432 SMART SM00387 318 425 8.5E-16 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS10845 3c0bfddb0fac5333dec82f962db6460e 432 Gene3D G3DSA:1.10.287.130 199 268 7.1E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS10845 3c0bfddb0fac5333dec82f962db6460e 432 Gene3D G3DSA:3.30.565.10 278 412 3.5E-24 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS10845 3c0bfddb0fac5333dec82f962db6460e 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 355 369 1.3E-6 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS10845 3c0bfddb0fac5333dec82f962db6460e 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 371 381 1.3E-6 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS10845 3c0bfddb0fac5333dec82f962db6460e 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 383 401 1.3E-6 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS10845 3c0bfddb0fac5333dec82f962db6460e 432 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 322 411 3.9E-13 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS02175 c7ca014451a571acbc27f953280f695b 556 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 179 204 - T 22-04-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 SMGD1_RS02175 c7ca014451a571acbc27f953280f695b 556 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 64 475 1.6E-57 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 SMGD1_RS02175 c7ca014451a571acbc27f953280f695b 556 PANTHER PTHR11819 33 545 3.9E-265 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 SMGD1_RS02175 c7ca014451a571acbc27f953280f695b 556 Pfam PF00474 Sodium:solute symporter family 64 475 3.3E-113 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 SMGD1_RS02175 c7ca014451a571acbc27f953280f695b 556 PANTHER PTHR11819:SF13 33 545 3.9E-265 T 22-04-2016 SMGD1_RS04725 993567140fc31a5975483214325bf98f 393 SUPERFAMILY SSF53187 1 259 7.25E-19 T 22-04-2016 SMGD1_RS04725 993567140fc31a5975483214325bf98f 393 Pfam PF17129 C-terminal domain of metallo-carboxypeptidase 301 391 3.1E-24 T 22-04-2016 IPR033397 Metallo-carboxypeptidase, C-terminal domain SMGD1_RS04725 993567140fc31a5975483214325bf98f 393 Pfam PF17033 Carboxypeptidase controlling helical cell shape catalytic 2 227 3.4E-82 T 22-04-2016 IPR031489 D,L-carboxypeptidase, peptidase domain SMGD1_RS13300 37ec5439b0d90ae1162fc7b87603e56b 314 PIRSF PIRSF000102 1 312 7.7E-97 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SMGD1_RS13300 37ec5439b0d90ae1162fc7b87603e56b 314 Gene3D G3DSA:3.40.50.720 4 145 1.4E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS13300 37ec5439b0d90ae1162fc7b87603e56b 314 SUPERFAMILY SSF51735 4 146 1.94E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS13300 37ec5439b0d90ae1162fc7b87603e56b 314 Hamap MF_00487 Malate dehydrogenase [mdh]. 4 308 35.633 T 22-04-2016 IPR011275 Malate dehydrogenase, type 3 GO:0016616|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 SMGD1_RS13300 37ec5439b0d90ae1162fc7b87603e56b 314 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 149 306 4.3E-25 T 22-04-2016 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 SMGD1_RS13300 37ec5439b0d90ae1162fc7b87603e56b 314 SUPERFAMILY SSF56327 145 307 1.73E-43 T 22-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 SMGD1_RS13300 37ec5439b0d90ae1162fc7b87603e56b 314 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 5 144 2.0E-40 T 22-04-2016 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 SMGD1_RS13300 37ec5439b0d90ae1162fc7b87603e56b 314 PRINTS PR00086 L-lactate dehydrogenase signature 30 54 1.2E-25 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SMGD1_RS13300 37ec5439b0d90ae1162fc7b87603e56b 314 PRINTS PR00086 L-lactate dehydrogenase signature 5 29 1.2E-25 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SMGD1_RS13300 37ec5439b0d90ae1162fc7b87603e56b 314 PRINTS PR00086 L-lactate dehydrogenase signature 118 138 1.2E-25 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SMGD1_RS13300 37ec5439b0d90ae1162fc7b87603e56b 314 PRINTS PR00086 L-lactate dehydrogenase signature 172 185 1.2E-25 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SMGD1_RS13300 37ec5439b0d90ae1162fc7b87603e56b 314 PRINTS PR00086 L-lactate dehydrogenase signature 142 160 1.2E-25 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SMGD1_RS13300 37ec5439b0d90ae1162fc7b87603e56b 314 PANTHER PTHR11540:SF16 4 314 9.3E-101 T 22-04-2016 SMGD1_RS13300 37ec5439b0d90ae1162fc7b87603e56b 314 Gene3D G3DSA:3.90.110.10 148 305 7.7E-46 T 22-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 SMGD1_RS13300 37ec5439b0d90ae1162fc7b87603e56b 314 PANTHER PTHR11540 4 314 9.3E-101 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SMGD1_RS12545 5bc668f398429713abb0d994a471bdc0 659 Gene3D G3DSA:3.30.450.20 166 303 1.0E-11 T 22-04-2016 SMGD1_RS12545 5bc668f398429713abb0d994a471bdc0 659 SMART SM00304 328 382 7.0E-4 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SMGD1_RS12545 5bc668f398429713abb0d994a471bdc0 659 PANTHER PTHR32089 175 659 1.3E-76 T 22-04-2016 SMGD1_RS12545 5bc668f398429713abb0d994a471bdc0 659 Gene3D G3DSA:1.10.287.950 416 571 1.9E-43 T 22-04-2016 SMGD1_RS12545 5bc668f398429713abb0d994a471bdc0 659 Gene3D G3DSA:1.10.287.950 607 655 1.9E-43 T 22-04-2016 SMGD1_RS12545 5bc668f398429713abb0d994a471bdc0 659 SUPERFAMILY SSF58104 350 659 3.66E-56 T 22-04-2016 SMGD1_RS12545 5bc668f398429713abb0d994a471bdc0 659 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 469 657 5.2E-42 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SMGD1_RS12545 5bc668f398429713abb0d994a471bdc0 659 Pfam PF17201 Cache 3/Cache 2 fusion domain 32 305 7.2E-86 T 22-04-2016 IPR033462 Cache 3/Cache 2 fusion domain SMGD1_RS12545 5bc668f398429713abb0d994a471bdc0 659 SMART SM00283 393 658 4.2E-41 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SMGD1_RS12545 5bc668f398429713abb0d994a471bdc0 659 SUPERFAMILY SSF103190 110 207 1.23E-11 T 22-04-2016 IPR029151 Periplasmic sensor domain-like SMGD1_RS12545 5bc668f398429713abb0d994a471bdc0 659 Pfam PF00672 HAMP domain 309 377 1.8E-6 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SMGD1_RS07310 535c96a9f299d25e395d355f6d5c4166 168 PANTHER PTHR30574:SF2 11 158 6.6E-15 T 22-04-2016 SMGD1_RS07310 535c96a9f299d25e395d355f6d5c4166 168 PANTHER PTHR30574 11 158 6.6E-15 T 22-04-2016 SMGD1_RS07310 535c96a9f299d25e395d355f6d5c4166 168 Pfam PF04143 Sulphur transport 3 156 1.3E-17 T 22-04-2016 IPR007272 Sulphur transport domain SMGD1_RS12295 408486e59f9ed835205d91b05c386234 853 SMART SM00487 2 187 9.2E-21 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SMGD1_RS12295 408486e59f9ed835205d91b05c386234 853 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 4 850 4.7E-289 T 22-04-2016 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type SMGD1_RS12295 408486e59f9ed835205d91b05c386234 853 Pfam PF08482 ATP-dependent helicase C-terminal 706 838 1.9E-51 T 22-04-2016 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal SMGD1_RS12295 408486e59f9ed835205d91b05c386234 853 SUPERFAMILY SSF52540 17 348 6.95E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS12295 408486e59f9ed835205d91b05c386234 853 PANTHER PTHR18934 2 444 7.6E-140 T 22-04-2016 SMGD1_RS12295 408486e59f9ed835205d91b05c386234 853 Pfam PF00270 DEAD/DEAH box helicase 15 161 6.2E-11 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SMGD1_RS12295 408486e59f9ed835205d91b05c386234 853 Pfam PF04408 Helicase associated domain (HA2) 396 457 3.6E-12 T 22-04-2016 IPR007502 Helicase-associated domain GO:0004386 SMGD1_RS12295 408486e59f9ed835205d91b05c386234 853 Gene3D G3DSA:3.40.50.300 207 349 9.3E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS12295 408486e59f9ed835205d91b05c386234 853 SMART SM00490 235 337 3.4E-16 T 22-04-2016 IPR001650 Helicase, C-terminal SMGD1_RS12295 408486e59f9ed835205d91b05c386234 853 SMART SM00847 395 470 1.8E-10 T 22-04-2016 IPR007502 Helicase-associated domain GO:0004386 SMGD1_RS12295 408486e59f9ed835205d91b05c386234 853 PIRSF PIRSF005496 1 852 8.0E-290 T 22-04-2016 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type SMGD1_RS12295 408486e59f9ed835205d91b05c386234 853 Pfam PF00271 Helicase conserved C-terminal domain 211 336 1.9E-15 T 22-04-2016 IPR001650 Helicase, C-terminal SMGD1_RS12295 408486e59f9ed835205d91b05c386234 853 Gene3D G3DSA:3.40.50.300 4 161 2.8E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS07275 155c0c4e8fea36c4984a38a1b8af7144 478 Gene3D G3DSA:2.30.30.60 299 362 3.1E-5 T 22-04-2016 SMGD1_RS07275 155c0c4e8fea36c4984a38a1b8af7144 478 Pfam PF00924 Mechanosensitive ion channel 240 474 6.7E-22 T 22-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 SMGD1_RS07275 155c0c4e8fea36c4984a38a1b8af7144 478 SUPERFAMILY SSF50182 283 363 1.73E-7 T 22-04-2016 IPR010920 LSM domain SMGD1_RS11945 7d62db3af2672c9987cac92a976f3056 152 PANTHER PTHR11079:SF25 2 152 1.3E-43 T 22-04-2016 SMGD1_RS11945 7d62db3af2672c9987cac92a976f3056 152 SUPERFAMILY SSF53927 2 125 2.68E-43 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 SMGD1_RS11945 7d62db3af2672c9987cac92a976f3056 152 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 51 88 - T 22-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 SMGD1_RS11945 7d62db3af2672c9987cac92a976f3056 152 PANTHER PTHR11079 2 152 1.3E-43 T 22-04-2016 SMGD1_RS11945 7d62db3af2672c9987cac92a976f3056 152 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 3 99 1.3E-26 T 22-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 SMGD1_RS11945 7d62db3af2672c9987cac92a976f3056 152 Gene3D G3DSA:3.40.140.10 2 145 1.7E-46 T 22-04-2016 SMGD1_RS09265 5e63aead73c6393e87175e278b5a3ce3 453 Gene3D G3DSA:3.10.580.10 135 260 1.1E-10 T 22-04-2016 SMGD1_RS09265 5e63aead73c6393e87175e278b5a3ce3 453 SUPERFAMILY SSF158791 7 133 3.27E-17 T 22-04-2016 SMGD1_RS09265 5e63aead73c6393e87175e278b5a3ce3 453 SUPERFAMILY SSF161093 280 452 2.48E-49 T 22-04-2016 SMGD1_RS09265 5e63aead73c6393e87175e278b5a3ce3 453 PANTHER PTHR41394:SF1 156 440 1.2E-49 T 22-04-2016 SMGD1_RS09265 5e63aead73c6393e87175e278b5a3ce3 453 Pfam PF01769 Divalent cation transporter 324 445 7.0E-27 T 22-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 SMGD1_RS09265 5e63aead73c6393e87175e278b5a3ce3 453 SMART SM00924 27 136 4.4E-17 T 22-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain SMGD1_RS09265 5e63aead73c6393e87175e278b5a3ce3 453 PANTHER PTHR41394 156 440 1.2E-49 T 22-04-2016 SMGD1_RS09265 5e63aead73c6393e87175e278b5a3ce3 453 Gene3D G3DSA:1.10.357.20 281 452 1.3E-51 T 22-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 SMGD1_RS09265 5e63aead73c6393e87175e278b5a3ce3 453 TIGRFAM TIGR00400 mgtE: magnesium transporter 10 452 7.5E-77 T 22-04-2016 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 SMGD1_RS09265 5e63aead73c6393e87175e278b5a3ce3 453 Pfam PF03448 MgtE intracellular N domain 28 133 1.8E-17 T 22-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain SMGD1_RS09265 5e63aead73c6393e87175e278b5a3ce3 453 SUPERFAMILY SSF54631 136 275 1.31E-16 T 22-04-2016 SMGD1_RS09265 5e63aead73c6393e87175e278b5a3ce3 453 Gene3D G3DSA:1.25.60.10 25 130 1.0E-16 T 22-04-2016 SMGD1_RS05695 ac96fd1e3f5b6fc95f74329d585581ad 171 Pfam PF01863 Protein of unknown function DUF45 94 155 3.4E-12 T 22-04-2016 IPR002725 Protein of unknown function DUF45 SMGD1_RS05695 ac96fd1e3f5b6fc95f74329d585581ad 171 PANTHER PTHR30399 1 169 1.5E-84 T 22-04-2016 SMGD1_RS05695 ac96fd1e3f5b6fc95f74329d585581ad 171 PANTHER PTHR30399:SF4 1 169 1.5E-84 T 22-04-2016 SMGD1_RS11315 619e493bc60eb0d0322e94c91abc137a 339 PANTHER PTHR11732 1 250 6.7E-113 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta SMGD1_RS11315 619e493bc60eb0d0322e94c91abc137a 339 PANTHER PTHR11732 270 338 6.7E-113 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta SMGD1_RS11315 619e493bc60eb0d0322e94c91abc137a 339 SUPERFAMILY SSF51430 1 336 1.7E-94 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain SMGD1_RS11315 619e493bc60eb0d0322e94c91abc137a 339 Pfam PF00248 Aldo/keto reductase family 15 330 1.6E-70 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain SMGD1_RS11315 619e493bc60eb0d0322e94c91abc137a 339 Gene3D G3DSA:3.20.20.100 1 336 1.3E-94 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain SMGD1_RS00380 a77a26dd7bf47289079f821ffdba7f19 231 Gene3D G3DSA:3.40.1130.10 22 219 1.3E-13 T 22-04-2016 SMGD1_RS00380 a77a26dd7bf47289079f821ffdba7f19 231 PANTHER PTHR10434 51 221 2.4E-26 T 22-04-2016 SMGD1_RS00380 a77a26dd7bf47289079f821ffdba7f19 231 Pfam PF01553 Acyltransferase 58 186 1.2E-19 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 SMGD1_RS00380 a77a26dd7bf47289079f821ffdba7f19 231 SMART SM00563 71 189 8.6E-20 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 SMGD1_RS00380 a77a26dd7bf47289079f821ffdba7f19 231 SUPERFAMILY SSF69593 45 221 1.44E-27 T 22-04-2016 SMGD1_RS13500 cf47cd97c99e2e2d302a81069b860966 309 Pfam PF01699 Sodium/calcium exchanger protein 169 303 1.1E-21 T 22-04-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 SMGD1_RS13500 cf47cd97c99e2e2d302a81069b860966 309 Pfam PF01699 Sodium/calcium exchanger protein 3 143 1.5E-26 T 22-04-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 SMGD1_RS13500 cf47cd97c99e2e2d302a81069b860966 309 PANTHER PTHR10846 18 304 3.6E-41 T 22-04-2016 IPR004481 Sodium/potassium/calcium exchanger Reactome: REACT_15518 SMGD1_RS13500 cf47cd97c99e2e2d302a81069b860966 309 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 4 298 7.4E-63 T 22-04-2016 IPR004481 Sodium/potassium/calcium exchanger Reactome: REACT_15518 SMGD1_RS13500 cf47cd97c99e2e2d302a81069b860966 309 PANTHER PTHR10846:SF8 18 304 3.6E-41 T 22-04-2016 SMGD1_RS04090 7362f7e4bb69b41ee92b7c11f89841f0 412 PANTHER PTHR11851:SF140 11 369 2.0E-42 T 22-04-2016 SMGD1_RS04090 7362f7e4bb69b41ee92b7c11f89841f0 412 Pfam PF00675 Insulinase (Peptidase family M16) 36 161 1.4E-9 T 22-04-2016 IPR011765 Peptidase M16, N-terminal SMGD1_RS04090 7362f7e4bb69b41ee92b7c11f89841f0 412 SUPERFAMILY SSF63411 233 401 9.17E-33 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 SMGD1_RS04090 7362f7e4bb69b41ee92b7c11f89841f0 412 Gene3D G3DSA:3.30.830.10 235 399 3.5E-26 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 SMGD1_RS04090 7362f7e4bb69b41ee92b7c11f89841f0 412 SUPERFAMILY SSF63411 7 206 1.22E-34 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 SMGD1_RS04090 7362f7e4bb69b41ee92b7c11f89841f0 412 Gene3D G3DSA:3.30.830.10 11 217 1.3E-33 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 SMGD1_RS04090 7362f7e4bb69b41ee92b7c11f89841f0 412 PANTHER PTHR11851 11 369 2.0E-42 T 22-04-2016 SMGD1_RS04090 7362f7e4bb69b41ee92b7c11f89841f0 412 Pfam PF05193 Peptidase M16 inactive domain 169 344 4.0E-22 T 22-04-2016 IPR007863 Peptidase M16, C-terminal SMGD1_RS03950 195b507cc2b9534cd814ab03131fa68b 308 Pfam PF00092 von Willebrand factor type A domain 86 257 7.7E-21 T 22-04-2016 IPR002035 von Willebrand factor, type A SMGD1_RS03950 195b507cc2b9534cd814ab03131fa68b 308 PANTHER PTHR22550 54 299 2.3E-28 T 22-04-2016 SMGD1_RS03950 195b507cc2b9534cd814ab03131fa68b 308 SMART SM00327 83 262 2.1E-17 T 22-04-2016 IPR002035 von Willebrand factor, type A SMGD1_RS03950 195b507cc2b9534cd814ab03131fa68b 308 SUPERFAMILY SSF53300 81 264 3.56E-32 T 22-04-2016 IPR002035 von Willebrand factor, type A SMGD1_RS03950 195b507cc2b9534cd814ab03131fa68b 308 PANTHER PTHR22550:SF12 54 299 2.3E-28 T 22-04-2016 SMGD1_RS03950 195b507cc2b9534cd814ab03131fa68b 308 Gene3D G3DSA:3.40.50.410 80 265 3.2E-24 T 22-04-2016 IPR002035 von Willebrand factor, type A SMGD1_RS12315 bda645aba7a76f4f57f1946789fcff84 50 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 15 47 1.2E-7 T 22-04-2016 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 SMGD1_RS12790 b1f864eaf5fd854a55ec555f76c5b019 220 SMART SM00448 2 111 3.5E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS12790 b1f864eaf5fd854a55ec555f76c5b019 220 PANTHER PTHR26402 2 220 8.2E-56 T 22-04-2016 SMGD1_RS12790 b1f864eaf5fd854a55ec555f76c5b019 220 SMART SM00862 143 218 5.9E-18 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMGD1_RS12790 b1f864eaf5fd854a55ec555f76c5b019 220 SUPERFAMILY SSF52172 1 129 2.42E-29 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS12790 b1f864eaf5fd854a55ec555f76c5b019 220 Gene3D G3DSA:1.10.10.10 123 219 8.1E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMGD1_RS12790 b1f864eaf5fd854a55ec555f76c5b019 220 Pfam PF00486 Transcriptional regulatory protein, C terminal 144 218 2.6E-17 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMGD1_RS12790 b1f864eaf5fd854a55ec555f76c5b019 220 Pfam PF00072 Response regulator receiver domain 4 111 4.9E-19 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS12790 b1f864eaf5fd854a55ec555f76c5b019 220 PANTHER PTHR26402:SF50 2 220 8.2E-56 T 22-04-2016 SMGD1_RS12790 b1f864eaf5fd854a55ec555f76c5b019 220 Gene3D G3DSA:3.40.50.2300 1 122 1.1E-27 T 22-04-2016 SMGD1_RS12790 b1f864eaf5fd854a55ec555f76c5b019 220 SUPERFAMILY SSF46894 125 218 5.39E-21 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SMGD1_RS05070 8f0f0ce74b3a6e0edfc26184185392e0 184 SUPERFAMILY SSF53328 2 181 7.33E-48 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SMGD1_RS05070 8f0f0ce74b3a6e0edfc26184185392e0 184 PANTHER PTHR10520 1 178 3.4E-51 T 22-04-2016 SMGD1_RS05070 8f0f0ce74b3a6e0edfc26184185392e0 184 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 2 182 1.7E-50 T 22-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 SMGD1_RS05070 8f0f0ce74b3a6e0edfc26184185392e0 184 Pfam PF00551 Formyl transferase 2 178 3.5E-46 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SMGD1_RS05070 8f0f0ce74b3a6e0edfc26184185392e0 184 Gene3D G3DSA:3.40.50.170 1 183 4.5E-59 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SMGD1_RS05070 8f0f0ce74b3a6e0edfc26184185392e0 184 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 3 184 24.005 T 22-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 SMGD1_RS12505 c5f54b07345d40e5b5043ba081e6d58b 443 Pfam PF00266 Aminotransferase class-V 33 425 1.3E-40 T 22-04-2016 IPR000192 Aminotransferase class V domain SMGD1_RS12505 c5f54b07345d40e5b5043ba081e6d58b 443 PANTHER PTHR11601 33 432 3.2E-102 T 22-04-2016 SMGD1_RS12505 c5f54b07345d40e5b5043ba081e6d58b 443 SUPERFAMILY SSF53383 26 438 7.6E-63 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SMGD1_RS12505 c5f54b07345d40e5b5043ba081e6d58b 443 Gene3D G3DSA:3.40.640.10 45 306 8.3E-46 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SMGD1_RS12505 c5f54b07345d40e5b5043ba081e6d58b 443 Gene3D G3DSA:3.90.1150.10 307 433 5.4E-11 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SMGD1_RS12505 c5f54b07345d40e5b5043ba081e6d58b 443 PANTHER PTHR11601:SF24 33 432 3.2E-102 T 22-04-2016 SMGD1_RS14070 b569ac12ffb30c7aabd7148bff20e102 258 SUPERFAMILY SSF103088 117 236 4.84E-27 T 22-04-2016 IPR006665 OmpA-like domain SMGD1_RS14070 b569ac12ffb30c7aabd7148bff20e102 258 PANTHER PTHR30329 1 234 1.7E-53 T 22-04-2016 SMGD1_RS14070 b569ac12ffb30c7aabd7148bff20e102 258 Gene3D G3DSA:3.30.1330.60 109 236 4.9E-31 T 22-04-2016 IPR006665 OmpA-like domain SMGD1_RS14070 b569ac12ffb30c7aabd7148bff20e102 258 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 4 56 4.2E-17 T 22-04-2016 IPR025713 Motility protein B, N-terminal domain SMGD1_RS14070 b569ac12ffb30c7aabd7148bff20e102 258 PANTHER PTHR30329:SF4 1 234 1.7E-53 T 22-04-2016 SMGD1_RS14070 b569ac12ffb30c7aabd7148bff20e102 258 Pfam PF00691 OmpA family 128 230 1.5E-16 T 22-04-2016 IPR006665 OmpA-like domain SMGD1_RS04105 fbc93e04f5833e77e62b37972265eb46 801 Gene3D G3DSA:3.90.10.10 605 633 1.3E-7 T 22-04-2016 SMGD1_RS04105 fbc93e04f5833e77e62b37972265eb46 801 Gene3D G3DSA:3.90.10.10 480 505 1.3E-7 T 22-04-2016 SMGD1_RS04105 fbc93e04f5833e77e62b37972265eb46 801 Gene3D G3DSA:3.90.10.10 716 726 1.3E-7 T 22-04-2016 SMGD1_RS04105 fbc93e04f5833e77e62b37972265eb46 801 Pfam PF13435 Cytochrome c554 and c-prime 285 374 4.7E-4 T 22-04-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 SMGD1_RS04105 fbc93e04f5833e77e62b37972265eb46 801 Gene3D G3DSA:1.10.710.10 111 127 1.9E-26 T 22-04-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 SMGD1_RS04105 fbc93e04f5833e77e62b37972265eb46 801 Gene3D G3DSA:1.10.710.10 18 110 1.8E-5 T 22-04-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 SMGD1_RS04105 fbc93e04f5833e77e62b37972265eb46 801 Gene3D G3DSA:1.10.710.10 198 294 1.9E-26 T 22-04-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 SMGD1_RS04105 fbc93e04f5833e77e62b37972265eb46 801 Gene3D G3DSA:1.10.710.10 327 373 1.9E-26 T 22-04-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 SMGD1_RS04105 fbc93e04f5833e77e62b37972265eb46 801 Gene3D G3DSA:1.10.710.10 163 164 1.9E-26 T 22-04-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 SMGD1_RS04105 fbc93e04f5833e77e62b37972265eb46 801 SUPERFAMILY SSF48695 481 566 1.23E-33 T 22-04-2016 IPR011031 Multihaem cytochrome SMGD1_RS04105 fbc93e04f5833e77e62b37972265eb46 801 SUPERFAMILY SSF48695 17 134 1.23E-33 T 22-04-2016 IPR011031 Multihaem cytochrome SMGD1_RS04105 fbc93e04f5833e77e62b37972265eb46 801 SUPERFAMILY SSF48695 196 245 1.23E-33 T 22-04-2016 IPR011031 Multihaem cytochrome SMGD1_RS04105 fbc93e04f5833e77e62b37972265eb46 801 SUPERFAMILY SSF48695 612 631 1.23E-33 T 22-04-2016 IPR011031 Multihaem cytochrome SMGD1_RS04105 fbc93e04f5833e77e62b37972265eb46 801 SUPERFAMILY SSF48695 272 290 1.23E-33 T 22-04-2016 IPR011031 Multihaem cytochrome SMGD1_RS04105 fbc93e04f5833e77e62b37972265eb46 801 SUPERFAMILY SSF48695 330 396 1.23E-33 T 22-04-2016 IPR011031 Multihaem cytochrome SMGD1_RS00295 84c86df85d334df7124a9920ede543b3 257 TIGRFAM TIGR04484 thiosulf_SoxA: sulfur oxidation c-type cytochrome SoxA 42 257 1.3E-60 T 22-04-2016 IPR025710 SoxAX cytochrome complex subunit A GO:0009055|GO:0016491|GO:0019417|GO:0020037|GO:0070069 SMGD1_RS00295 84c86df85d334df7124a9920ede543b3 257 Gene3D G3DSA:1.10.760.10 74 256 5.3E-45 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS00295 84c86df85d334df7124a9920ede543b3 257 PIRSF PIRSF038455 13 257 5.6E-59 T 22-04-2016 IPR025710 SoxAX cytochrome complex subunit A GO:0009055|GO:0016491|GO:0019417|GO:0020037|GO:0070069 SMGD1_RS00295 84c86df85d334df7124a9920ede543b3 257 SUPERFAMILY SSF46626 143 256 6.91E-24 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS00295 84c86df85d334df7124a9920ede543b3 257 SUPERFAMILY SSF46626 26 135 2.36E-7 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS06340 360d225d507832e13af3ed7f16532472 267 Gene3D G3DSA:3.90.45.10 4 169 3.1E-25 T 22-04-2016 IPR023635 Peptide deformylase SMGD1_RS06340 360d225d507832e13af3ed7f16532472 267 Pfam PF01327 Polypeptide deformylase 3 148 8.7E-20 T 22-04-2016 IPR023635 Peptide deformylase SMGD1_RS06340 360d225d507832e13af3ed7f16532472 267 PANTHER PTHR10458:SF2 20 133 3.9E-14 T 22-04-2016 SMGD1_RS06340 360d225d507832e13af3ed7f16532472 267 SUPERFAMILY SSF56420 1 154 1.57E-25 T 22-04-2016 IPR023635 Peptide deformylase SMGD1_RS06340 360d225d507832e13af3ed7f16532472 267 PRINTS PR01576 Peptide deformylase signature 116 145 1.1E-6 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SMGD1_RS06340 360d225d507832e13af3ed7f16532472 267 PRINTS PR01576 Peptide deformylase signature 32 61 1.1E-6 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SMGD1_RS06340 360d225d507832e13af3ed7f16532472 267 PRINTS PR01576 Peptide deformylase signature 97 115 1.1E-6 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SMGD1_RS06340 360d225d507832e13af3ed7f16532472 267 PANTHER PTHR10458 20 133 3.9E-14 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SMGD1_RS10575 47cf7dd1c2de3528be81e82064ad574d 739 TIGRFAM TIGR03545 TIGR03545: TIGR03545 family protein 168 695 3.9E-82 T 22-04-2016 IPR019934 Conserved hypothetical protein CHP03545 SMGD1_RS10575 47cf7dd1c2de3528be81e82064ad574d 739 TIGRFAM TIGR03546 TIGR03546: TIGR03546 family protein 5 154 1.1E-40 T 22-04-2016 IPR019935 Conserved hypothetical protein CHP03546 SMGD1_RS12590 241d51028853ce84d120f1fdf54ce5f1 173 Pfam PF13590 Domain of unknown function (DUF4136) 22 172 1.8E-26 T 22-04-2016 IPR025411 Domain of unknown function DUF4136 SMGD1_RS13475 72b9000328301e32d9d71df82c9173e6 409 SUPERFAMILY SSF51445 101 240 8.43E-6 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily SMGD1_RS13475 72b9000328301e32d9d71df82c9173e6 409 SUPERFAMILY SSF51445 320 360 8.43E-6 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily SMGD1_RS13475 72b9000328301e32d9d71df82c9173e6 409 Pfam PF13200 Putative glycosyl hydrolase domain 91 399 9.0E-104 T 22-04-2016 IPR025275 Putative glycosyl hydrolase domain DUF4015 SMGD1_RS13475 72b9000328301e32d9d71df82c9173e6 409 Gene3D G3DSA:2.60.40.1120 20 73 1.7E-4 T 22-04-2016 IPR014766 Carboxypeptidase, regulatory domain SMGD1_RS12715 a95ab995039171fdd5543c378ac7db4a 640 Pfam PF00990 Diguanylate cyclase, GGDEF domain 236 391 8.7E-17 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS12715 a95ab995039171fdd5543c378ac7db4a 640 SMART SM00267 227 396 2.1E-5 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS12715 a95ab995039171fdd5543c378ac7db4a 640 Pfam PF00563 EAL domain 415 634 1.1E-14 T 22-04-2016 IPR001633 EAL domain SMGD1_RS12715 a95ab995039171fdd5543c378ac7db4a 640 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 235 393 9.2E-13 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS12715 a95ab995039171fdd5543c378ac7db4a 640 Pfam PF16448 LapD/MoxY periplasmic domain 24 144 1.3E-31 T 22-04-2016 IPR032244 LapD/MoxY, periplasmic domain SMGD1_RS12715 a95ab995039171fdd5543c378ac7db4a 640 SUPERFAMILY SSF141868 413 633 2.35E-12 T 22-04-2016 IPR001633 EAL domain SMGD1_RS12715 a95ab995039171fdd5543c378ac7db4a 640 Gene3D G3DSA:3.20.20.450 409 627 4.5E-11 T 22-04-2016 IPR001633 EAL domain SMGD1_RS12715 a95ab995039171fdd5543c378ac7db4a 640 SUPERFAMILY SSF55073 241 393 6.28E-18 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS12715 a95ab995039171fdd5543c378ac7db4a 640 Gene3D G3DSA:3.30.70.270 236 394 1.8E-20 T 22-04-2016 SMGD1_RS03320 5e2cb4826abb1ab68b9704015bead5d2 400 PANTHER PTHR30629:SF2 2 397 1.6E-85 T 22-04-2016 SMGD1_RS03320 5e2cb4826abb1ab68b9704015bead5d2 400 Pfam PF00589 Phage integrase family 217 377 3.8E-18 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 SMGD1_RS03320 5e2cb4826abb1ab68b9704015bead5d2 400 Gene3D G3DSA:1.10.443.10 217 384 5.4E-21 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 SMGD1_RS03320 5e2cb4826abb1ab68b9704015bead5d2 400 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 103 156 7.3E-6 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 SMGD1_RS03320 5e2cb4826abb1ab68b9704015bead5d2 400 Pfam PF13356 Domain of unknown function (DUF4102) 8 87 2.3E-15 T 22-04-2016 IPR025166 Domain of unknown function DUF4102 SMGD1_RS03320 5e2cb4826abb1ab68b9704015bead5d2 400 Gene3D G3DSA:1.10.150.130 103 199 7.2E-15 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal SMGD1_RS03320 5e2cb4826abb1ab68b9704015bead5d2 400 PANTHER PTHR30629 2 397 1.6E-85 T 22-04-2016 SMGD1_RS03320 5e2cb4826abb1ab68b9704015bead5d2 400 SUPERFAMILY SSF56349 103 388 1.53E-51 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 SMGD1_RS05055 be3a49ef2c94c6d92ee5b27c3e30e8c2 539 Pfam PF11845 Protein of unknown function (DUF3365) 26 190 9.9E-21 T 22-04-2016 IPR021796 Protein of unknown function DUF3365 SMGD1_RS05055 be3a49ef2c94c6d92ee5b27c3e30e8c2 539 Gene3D G3DSA:3.30.450.20 243 369 3.2E-6 T 22-04-2016 SMGD1_RS05055 be3a49ef2c94c6d92ee5b27c3e30e8c2 539 SUPERFAMILY SSF55073 387 538 7.3E-45 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS05055 be3a49ef2c94c6d92ee5b27c3e30e8c2 539 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 378 538 1.6E-49 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS05055 be3a49ef2c94c6d92ee5b27c3e30e8c2 539 Pfam PF00990 Diguanylate cyclase, GGDEF domain 382 535 1.7E-44 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS05055 be3a49ef2c94c6d92ee5b27c3e30e8c2 539 Gene3D G3DSA:3.30.70.270 384 538 2.7E-49 T 22-04-2016 SMGD1_RS05055 be3a49ef2c94c6d92ee5b27c3e30e8c2 539 PANTHER PTHR10799 205 360 3.3E-28 T 22-04-2016 SMGD1_RS05055 be3a49ef2c94c6d92ee5b27c3e30e8c2 539 PANTHER PTHR10799 415 539 3.3E-28 T 22-04-2016 SMGD1_RS05055 be3a49ef2c94c6d92ee5b27c3e30e8c2 539 PANTHER PTHR10799:SF750 205 360 3.3E-28 T 22-04-2016 SMGD1_RS05055 be3a49ef2c94c6d92ee5b27c3e30e8c2 539 PANTHER PTHR10799:SF750 415 539 3.3E-28 T 22-04-2016 SMGD1_RS05055 be3a49ef2c94c6d92ee5b27c3e30e8c2 539 SMART SM00267 371 539 1.6E-61 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS08730 e56a7580e01055d1e084fb4ce50736c6 376 PANTHER PTHR38730 1 369 7.9E-36 T 22-04-2016 SMGD1_RS08730 e56a7580e01055d1e084fb4ce50736c6 376 Pfam PF09967 VWA-like domain (DUF2201) 253 375 1.5E-21 T 22-04-2016 IPR018698 VWA-like domain SMGD1_RS08730 e56a7580e01055d1e084fb4ce50736c6 376 Pfam PF13203 Putative metallopeptidase domain 4 244 2.8E-27 T 22-04-2016 IPR025154 Putative metallopeptidase domain SMGD1_RS08730 e56a7580e01055d1e084fb4ce50736c6 376 PANTHER PTHR38730:SF1 1 369 7.9E-36 T 22-04-2016 SMGD1_RS12570 84669f3fd6307a78b9598fe95d738753 215 Gene3D G3DSA:3.40.50.300 1 212 4.2E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS12570 84669f3fd6307a78b9598fe95d738753 215 PANTHER PTHR23359 1 214 1.4E-100 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SMGD1_RS12570 84669f3fd6307a78b9598fe95d738753 215 Pfam PF05191 Adenylate kinase, active site lid 123 158 1.4E-15 T 22-04-2016 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SMGD1_RS12570 84669f3fd6307a78b9598fe95d738753 215 SUPERFAMILY SSF52540 1 211 1.17E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS12570 84669f3fd6307a78b9598fe95d738753 215 PRINTS PR00094 Adenylate kinase signature 4 17 2.0E-32 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SMGD1_RS12570 84669f3fd6307a78b9598fe95d738753 215 PRINTS PR00094 Adenylate kinase signature 81 97 2.0E-32 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SMGD1_RS12570 84669f3fd6307a78b9598fe95d738753 215 PRINTS PR00094 Adenylate kinase signature 173 187 2.0E-32 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SMGD1_RS12570 84669f3fd6307a78b9598fe95d738753 215 PRINTS PR00094 Adenylate kinase signature 32 46 2.0E-32 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SMGD1_RS12570 84669f3fd6307a78b9598fe95d738753 215 PRINTS PR00094 Adenylate kinase signature 156 171 2.0E-32 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SMGD1_RS12570 84669f3fd6307a78b9598fe95d738753 215 Hamap MF_00235 Adenylate kinase [adk]. 1 215 49.531 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SMGD1_RS12570 84669f3fd6307a78b9598fe95d738753 215 Pfam PF00406 Adenylate kinase 5 186 3.1E-56 T 22-04-2016 SMGD1_RS12570 84669f3fd6307a78b9598fe95d738753 215 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SMGD1_RS12570 84669f3fd6307a78b9598fe95d738753 215 TIGRFAM TIGR01351 adk: adenylate kinase 2 212 2.2E-73 T 22-04-2016 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SMGD1_RS00505 26efd954c5704374c5aebbcde0383137 460 PANTHER PTHR30026 1 424 3.8E-28 T 22-04-2016 SMGD1_RS00505 26efd954c5704374c5aebbcde0383137 460 Gene3D G3DSA:1.20.1600.10 21 85 3.4E-52 T 22-04-2016 SMGD1_RS00505 26efd954c5704374c5aebbcde0383137 460 Gene3D G3DSA:1.20.1600.10 126 455 3.4E-52 T 22-04-2016 SMGD1_RS00505 26efd954c5704374c5aebbcde0383137 460 Pfam PF02321 Outer membrane efflux protein 27 255 1.2E-14 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SMGD1_RS00505 26efd954c5704374c5aebbcde0383137 460 Pfam PF02321 Outer membrane efflux protein 278 456 4.8E-19 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SMGD1_RS00505 26efd954c5704374c5aebbcde0383137 460 SUPERFAMILY SSF56954 124 456 1.83E-58 T 22-04-2016 SMGD1_RS00505 26efd954c5704374c5aebbcde0383137 460 SUPERFAMILY SSF56954 7 84 1.83E-58 T 22-04-2016 SMGD1_RS07060 2acbc5e84aed74514f56d41c8a66ed6b 101 Pfam PF00034 Cytochrome c 21 98 1.1E-10 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS07060 2acbc5e84aed74514f56d41c8a66ed6b 101 SUPERFAMILY SSF46626 21 98 1.1E-14 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS07060 2acbc5e84aed74514f56d41c8a66ed6b 101 Gene3D G3DSA:1.10.760.10 21 98 9.8E-14 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS09565 5f7aebcb4322ea187f4eecacf8985a1b 174 PANTHER PTHR30437 4 155 6.3E-51 T 22-04-2016 SMGD1_RS09565 5f7aebcb4322ea187f4eecacf8985a1b 174 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 4 154 4.0E-47 T 22-04-2016 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 SMGD1_RS09565 5f7aebcb4322ea187f4eecacf8985a1b 174 Gene3D G3DSA:1.10.287.180 3 74 1.1E-20 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 SMGD1_RS09565 5f7aebcb4322ea187f4eecacf8985a1b 174 PIRSF PIRSF006092 2 157 4.2E-45 T 22-04-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 SMGD1_RS09565 5f7aebcb4322ea187f4eecacf8985a1b 174 SUPERFAMILY SSF54534 80 155 8.24E-22 T 22-04-2016 SMGD1_RS09565 5f7aebcb4322ea187f4eecacf8985a1b 174 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 81 155 2.1E-27 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 SMGD1_RS09565 5f7aebcb4322ea187f4eecacf8985a1b 174 Gene3D G3DSA:3.10.50.30 75 156 1.3E-29 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 SMGD1_RS09565 5f7aebcb4322ea187f4eecacf8985a1b 174 Pfam PF03449 Transcription elongation factor, N-terminal 4 73 2.9E-19 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 SMGD1_RS09565 5f7aebcb4322ea187f4eecacf8985a1b 174 SUPERFAMILY SSF46557 4 77 5.62E-22 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 SMGD1_RS09565 5f7aebcb4322ea187f4eecacf8985a1b 174 Hamap MF_00105 Transcription elongation factor GreA [greA]. 1 154 26.876 T 22-04-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 SMGD1_RS05235 85d7ae87074653a48b97ff4e3b30ca15 210 PANTHER PTHR21235 3 209 3.3E-72 T 22-04-2016 SMGD1_RS05235 85d7ae87074653a48b97ff4e3b30ca15 210 Gene3D G3DSA:3.40.50.880 2 206 1.2E-72 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SMGD1_RS05235 85d7ae87074653a48b97ff4e3b30ca15 210 PIRSF PIRSF000495 2 206 8.8E-71 T 22-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 SMGD1_RS05235 85d7ae87074653a48b97ff4e3b30ca15 210 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 4 202 1.5E-66 T 22-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 SMGD1_RS05235 85d7ae87074653a48b97ff4e3b30ca15 210 Pfam PF00117 Glutamine amidotransferase class-I 6 200 6.4E-23 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 SMGD1_RS05235 85d7ae87074653a48b97ff4e3b30ca15 210 SUPERFAMILY SSF52317 4 204 7.37E-56 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SMGD1_RS05235 85d7ae87074653a48b97ff4e3b30ca15 210 PANTHER PTHR21235:SF1 3 209 3.3E-72 T 22-04-2016 SMGD1_RS05235 85d7ae87074653a48b97ff4e3b30ca15 210 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 3 203 34.12 T 22-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 SMGD1_RS09995 7175bb8566c50715d59da999649d040f 101 Pfam PF09397 Ftsk gamma domain 41 100 8.1E-15 T 22-04-2016 IPR018541 FtsK gamma domain SMGD1_RS09995 7175bb8566c50715d59da999649d040f 101 SUPERFAMILY SSF46785 39 100 6.29E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMGD1_RS09995 7175bb8566c50715d59da999649d040f 101 SMART SM00843 39 101 1.8E-6 T 22-04-2016 IPR018541 FtsK gamma domain SMGD1_RS05910 c1f8ce5c70498b31b66f4c41a4e189dc 354 PANTHER PTHR30106:SF2 1 354 1.1E-103 T 22-04-2016 SMGD1_RS05910 c1f8ce5c70498b31b66f4c41a4e189dc 354 PANTHER PTHR30106 1 354 1.1E-103 T 22-04-2016 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 SMGD1_RS05910 c1f8ce5c70498b31b66f4c41a4e189dc 354 TIGRFAM TIGR00698 TIGR00698: conserved hypothetical protein 12 351 1.0E-89 T 22-04-2016 IPR004630 Uncharacterised protein family UPF0324, bacteria GO:0016021 SMGD1_RS05910 c1f8ce5c70498b31b66f4c41a4e189dc 354 Pfam PF03601 Conserved hypothetical protein 698 14 331 3.7E-88 T 22-04-2016 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 SMGD1_RS10890 f2585306d53e68c0975534112824f877 294 SUPERFAMILY SSF54211 1 122 2.81E-38 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SMGD1_RS10890 f2585306d53e68c0975534112824f877 294 SUPERFAMILY SSF54211 130 272 2.05E-49 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SMGD1_RS10890 f2585306d53e68c0975534112824f877 294 PANTHER PTHR33694 1 280 6.6E-108 T 22-04-2016 SMGD1_RS10890 f2585306d53e68c0975534112824f877 294 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 1 282 2.2E-117 T 22-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 SMGD1_RS10890 f2585306d53e68c0975534112824f877 294 Gene3D G3DSA:3.30.230.20 1 122 2.4E-40 T 22-04-2016 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 SMGD1_RS10890 f2585306d53e68c0975534112824f877 294 Gene3D G3DSA:3.30.1700.10 126 277 5.3E-58 T 22-04-2016 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 SMGD1_RS10890 f2585306d53e68c0975534112824f877 294 Hamap MF_00388 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [lpxC]. 1 275 45.862 T 22-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 SMGD1_RS10890 f2585306d53e68c0975534112824f877 294 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 3 270 9.0E-102 T 22-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 SMGD1_RS10890 f2585306d53e68c0975534112824f877 294 PANTHER PTHR33694:SF1 1 280 6.6E-108 T 22-04-2016 SMGD1_RS02970 5106356fd5097e13a04d9c14038f44c7 357 PANTHER PTHR30188:SF3 18 356 2.0E-106 T 22-04-2016 SMGD1_RS02970 5106356fd5097e13a04d9c14038f44c7 357 SUPERFAMILY SSF52091 2 78 2.16E-6 T 22-04-2016 IPR002645 STAS domain SMGD1_RS02970 5106356fd5097e13a04d9c14038f44c7 357 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 117 354 2.4E-78 T 22-04-2016 IPR003453 ABC transport permease subunit MlaE, Proteobacteria SMGD1_RS02970 5106356fd5097e13a04d9c14038f44c7 357 PANTHER PTHR30188 18 356 2.0E-106 T 22-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 SMGD1_RS02970 5106356fd5097e13a04d9c14038f44c7 357 Gene3D G3DSA:3.30.750.24 2 77 1.3E-4 T 22-04-2016 IPR002645 STAS domain SMGD1_RS02970 5106356fd5097e13a04d9c14038f44c7 357 Pfam PF02405 Permease MlaE 143 350 4.2E-72 T 22-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 SMGD1_RS10145 f9b23ac63272d96e4b16f0ddc1290461 796 Pfam PF08463 EcoEI R protein C-terminal 634 791 1.1E-20 T 22-04-2016 IPR013670 EcoEI R protein C-terminal domain GO:0003677|GO:0003824|GO:0006304 SMGD1_RS10145 f9b23ac63272d96e4b16f0ddc1290461 796 SUPERFAMILY SSF52540 130 370 1.61E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS10145 f9b23ac63272d96e4b16f0ddc1290461 796 Pfam PF00271 Helicase conserved C-terminal domain 413 518 2.2E-7 T 22-04-2016 IPR001650 Helicase, C-terminal SMGD1_RS10145 f9b23ac63272d96e4b16f0ddc1290461 796 SMART SM00487 148 361 3.2E-16 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SMGD1_RS10145 f9b23ac63272d96e4b16f0ddc1290461 796 Pfam PF04851 Type III restriction enzyme, res subunit 152 327 6.4E-37 T 22-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 SMGD1_RS10145 f9b23ac63272d96e4b16f0ddc1290461 796 PANTHER PTHR30195 46 538 1.5E-62 T 22-04-2016 SMGD1_RS10145 f9b23ac63272d96e4b16f0ddc1290461 796 PANTHER PTHR30195:SF3 46 538 1.5E-62 T 22-04-2016 SMGD1_RS10145 f9b23ac63272d96e4b16f0ddc1290461 796 Gene3D G3DSA:3.40.50.300 413 530 8.8E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS10145 f9b23ac63272d96e4b16f0ddc1290461 796 Gene3D G3DSA:3.40.50.300 152 241 1.3E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS10145 f9b23ac63272d96e4b16f0ddc1290461 796 Gene3D G3DSA:3.40.50.300 273 337 1.3E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS10145 f9b23ac63272d96e4b16f0ddc1290461 796 SUPERFAMILY SSF52540 376 535 3.43E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS10145 f9b23ac63272d96e4b16f0ddc1290461 796 SUPERFAMILY SSF52540 282 323 3.43E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS04150 d55bbcf0099e81d01d36d6e4d71aa008 194 Pfam PF02169 LPP20 lipoprotein 46 151 1.4E-14 T 22-04-2016 IPR024952 Lipoprotein LPP20-like SMGD1_RS10690 66fdb85cb1b33bb9e4b61bfce72c1f51 197 Pfam PF02169 LPP20 lipoprotein 112 187 2.5E-8 T 22-04-2016 IPR024952 Lipoprotein LPP20-like SMGD1_RS04710 7a59644225fef06c1bb21cd50da59ebc 416 PANTHER PTHR37822:SF2 131 375 6.6E-22 T 22-04-2016 SMGD1_RS04710 7a59644225fef06c1bb21cd50da59ebc 416 PANTHER PTHR37822 131 375 6.6E-22 T 22-04-2016 SMGD1_RS03160 69dcbd7c6b19610352b784945abf209d 516 Gene3D G3DSA:3.30.70.270 358 514 6.2E-48 T 22-04-2016 SMGD1_RS03160 69dcbd7c6b19610352b784945abf209d 516 SMART SM00267 345 515 1.7E-49 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS03160 69dcbd7c6b19610352b784945abf209d 516 PANTHER PTHR10799 64 70 4.7E-27 T 22-04-2016 SMGD1_RS03160 69dcbd7c6b19610352b784945abf209d 516 Pfam PF00990 Diguanylate cyclase, GGDEF domain 357 511 2.7E-42 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS03160 69dcbd7c6b19610352b784945abf209d 516 SUPERFAMILY SSF55073 360 514 3.37E-44 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS03160 69dcbd7c6b19610352b784945abf209d 516 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 354 515 3.0E-50 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS03160 69dcbd7c6b19610352b784945abf209d 516 PANTHER PTHR10799:SF750 64 70 4.7E-27 T 22-04-2016 SMGD1_RS03160 69dcbd7c6b19610352b784945abf209d 516 PANTHER PTHR10799:SF750 388 516 4.7E-27 T 22-04-2016 SMGD1_RS03160 69dcbd7c6b19610352b784945abf209d 516 PANTHER PTHR10799 388 516 4.7E-27 T 22-04-2016 SMGD1_RS08475 3bc2539d7577d7e7dca5c33d261dd00a 791 Gene3D G3DSA:1.25.40.10 694 783 8.8E-4 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS08475 3bc2539d7577d7e7dca5c33d261dd00a 791 Gene3D G3DSA:1.25.40.10 252 370 2.5E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS08475 3bc2539d7577d7e7dca5c33d261dd00a 791 SUPERFAMILY SSF48452 292 369 3.76E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS08475 3bc2539d7577d7e7dca5c33d261dd00a 791 SUPERFAMILY SSF48452 738 784 3.76E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS08475 3bc2539d7577d7e7dca5c33d261dd00a 791 SUPERFAMILY SSF48452 411 442 3.76E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS13260 5a8c2f7d2724df370036a8499a4d27b0 857 Pfam PF07516 SecA Wing and Scaffold domain 573 779 1.4E-53 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 SMGD1_RS13260 5a8c2f7d2724df370036a8499a4d27b0 857 Gene3D G3DSA:1.10.3060.10 603 780 2.6E-44 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 SMGD1_RS13260 5a8c2f7d2724df370036a8499a4d27b0 857 Pfam PF00271 Helicase conserved C-terminal domain 417 534 3.7E-6 T 22-04-2016 IPR001650 Helicase, C-terminal SMGD1_RS13260 5a8c2f7d2724df370036a8499a4d27b0 857 SMART SM00958 230 342 2.4E-63 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 SMGD1_RS13260 5a8c2f7d2724df370036a8499a4d27b0 857 PRINTS PR00906 SecA protein signature 118 128 2.7E-65 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SMGD1_RS13260 5a8c2f7d2724df370036a8499a4d27b0 857 PRINTS PR00906 SecA protein signature 172 192 2.7E-65 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SMGD1_RS13260 5a8c2f7d2724df370036a8499a4d27b0 857 PRINTS PR00906 SecA protein signature 64 88 2.7E-65 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SMGD1_RS13260 5a8c2f7d2724df370036a8499a4d27b0 857 PRINTS PR00906 SecA protein signature 102 116 2.7E-65 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SMGD1_RS13260 5a8c2f7d2724df370036a8499a4d27b0 857 PRINTS PR00906 SecA protein signature 323 345 2.7E-65 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SMGD1_RS13260 5a8c2f7d2724df370036a8499a4d27b0 857 PRINTS PR00906 SecA protein signature 360 377 2.7E-65 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SMGD1_RS13260 5a8c2f7d2724df370036a8499a4d27b0 857 PRINTS PR00906 SecA protein signature 397 410 2.7E-65 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SMGD1_RS13260 5a8c2f7d2724df370036a8499a4d27b0 857 SMART SM00957 6 386 7.2E-265 T 22-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 SMGD1_RS13260 5a8c2f7d2724df370036a8499a4d27b0 857 Gene3D G3DSA:3.40.50.300 401 574 3.7E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS13260 5a8c2f7d2724df370036a8499a4d27b0 857 Pfam PF07517 SecA DEAD-like domain 7 386 6.8E-125 T 22-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 SMGD1_RS13260 5a8c2f7d2724df370036a8499a4d27b0 857 SUPERFAMILY SSF52540 401 573 1.61E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS13260 5a8c2f7d2724df370036a8499a4d27b0 857 Gene3D G3DSA:3.90.1440.10 233 352 1.0E-45 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 SMGD1_RS13260 5a8c2f7d2724df370036a8499a4d27b0 857 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 785 19.156 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SMGD1_RS13260 5a8c2f7d2724df370036a8499a4d27b0 857 SUPERFAMILY SSF52540 6 230 5.81E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS13260 5a8c2f7d2724df370036a8499a4d27b0 857 Pfam PF01043 SecA preprotein cross-linking domain 236 342 1.4E-38 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 SMGD1_RS13260 5a8c2f7d2724df370036a8499a4d27b0 857 SUPERFAMILY SSF81767 229 352 5.89E-44 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 SMGD1_RS13260 5a8c2f7d2724df370036a8499a4d27b0 857 SUPERFAMILY SSF81886 575 793 6.41E-63 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 SMGD1_RS13260 5a8c2f7d2724df370036a8499a4d27b0 857 SUPERFAMILY SSF81886 825 837 6.41E-63 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 SMGD1_RS13260 5a8c2f7d2724df370036a8499a4d27b0 857 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 500 2.5E-226 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SMGD1_RS13260 5a8c2f7d2724df370036a8499a4d27b0 857 Gene3D G3DSA:3.40.50.300 353 399 9.3E-121 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS13260 5a8c2f7d2724df370036a8499a4d27b0 857 Gene3D G3DSA:3.40.50.300 2 230 9.3E-121 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS13260 5a8c2f7d2724df370036a8499a4d27b0 857 PANTHER PTHR30612 1 850 0.0 T 22-04-2016 SMGD1_RS13260 5a8c2f7d2724df370036a8499a4d27b0 857 SUPERFAMILY SSF52540 352 399 5.81E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS13260 5a8c2f7d2724df370036a8499a4d27b0 857 Pfam PF02810 SEC-C motif 829 847 1.3E-8 T 22-04-2016 IPR004027 SEC-C motif SMGD1_RS07140 676b7553bccd6a0d9c1b4107b85c5635 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 59 70 8.5E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMGD1_RS07140 676b7553bccd6a0d9c1b4107b85c5635 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 112 120 8.5E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMGD1_RS07140 676b7553bccd6a0d9c1b4107b85c5635 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 151 8.5E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMGD1_RS07140 676b7553bccd6a0d9c1b4107b85c5635 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 151 3.8E-17 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMGD1_RS07140 676b7553bccd6a0d9c1b4107b85c5635 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 59 70 3.8E-17 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMGD1_RS07140 676b7553bccd6a0d9c1b4107b85c5635 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 170 3.8E-17 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMGD1_RS07140 676b7553bccd6a0d9c1b4107b85c5635 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 106 122 3.8E-17 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMGD1_RS07140 676b7553bccd6a0d9c1b4107b85c5635 259 PANTHER PTHR24322 132 164 8.9E-50 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMGD1_RS07140 676b7553bccd6a0d9c1b4107b85c5635 259 PANTHER PTHR24322 2 116 8.9E-50 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMGD1_RS07140 676b7553bccd6a0d9c1b4107b85c5635 259 Pfam PF00106 short chain dehydrogenase 1 172 4.9E-42 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMGD1_RS07140 676b7553bccd6a0d9c1b4107b85c5635 259 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 119 147 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 SMGD1_RS07140 676b7553bccd6a0d9c1b4107b85c5635 259 Gene3D G3DSA:3.40.50.720 1 228 8.9E-58 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS07140 676b7553bccd6a0d9c1b4107b85c5635 259 SUPERFAMILY SSF51735 1 224 4.12E-55 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS11185 780db2a1453139bb4b1f3370fcecd8ad 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 223 1.5E-16 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMGD1_RS11185 780db2a1453139bb4b1f3370fcecd8ad 225 PANTHER PTHR26402:SF292 2 225 5.4E-61 T 22-04-2016 SMGD1_RS11185 780db2a1453139bb4b1f3370fcecd8ad 225 PANTHER PTHR26402 2 225 5.4E-61 T 22-04-2016 SMGD1_RS11185 780db2a1453139bb4b1f3370fcecd8ad 225 Pfam PF00072 Response regulator receiver domain 4 112 1.6E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS11185 780db2a1453139bb4b1f3370fcecd8ad 225 SMART SM00862 147 223 2.3E-15 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMGD1_RS11185 780db2a1453139bb4b1f3370fcecd8ad 225 Gene3D G3DSA:1.10.10.10 134 224 5.2E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMGD1_RS11185 780db2a1453139bb4b1f3370fcecd8ad 225 Gene3D G3DSA:3.40.50.2300 2 123 5.6E-33 T 22-04-2016 SMGD1_RS11185 780db2a1453139bb4b1f3370fcecd8ad 225 SMART SM00448 2 112 1.3E-31 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS11185 780db2a1453139bb4b1f3370fcecd8ad 225 SUPERFAMILY SSF46894 134 224 3.12E-19 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SMGD1_RS11185 780db2a1453139bb4b1f3370fcecd8ad 225 SUPERFAMILY SSF52172 3 124 1.85E-34 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS10960 8a5b740744e73e8cf95ad9d21b5e6650 454 PANTHER PTHR13847 5 251 3.2E-17 T 22-04-2016 SMGD1_RS10960 8a5b740744e73e8cf95ad9d21b5e6650 454 Gene3D G3DSA:3.50.50.60 98 279 5.0E-16 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS10960 8a5b740744e73e8cf95ad9d21b5e6650 454 Gene3D G3DSA:3.50.50.60 4 56 5.0E-16 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS10960 8a5b740744e73e8cf95ad9d21b5e6650 454 SUPERFAMILY SSF51905 4 305 6.85E-16 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS10960 8a5b740744e73e8cf95ad9d21b5e6650 454 Pfam PF06039 Malate:quinone oxidoreductase (Mqo) 5 415 8.4E-25 T 22-04-2016 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254|UniPathway: UPA00223 SMGD1_RS07955 96b2e7c503b46eab53239f8012c0ec82 584 PANTHER PTHR10010:SF26 28 471 4.3E-46 T 22-04-2016 SMGD1_RS07955 96b2e7c503b46eab53239f8012c0ec82 584 PANTHER PTHR10010 28 471 4.3E-46 T 22-04-2016 SMGD1_RS07955 96b2e7c503b46eab53239f8012c0ec82 584 Pfam PF02690 Na+/Pi-cotransporter 199 294 2.9E-10 T 22-04-2016 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: REACT_15518 SMGD1_RS07955 96b2e7c503b46eab53239f8012c0ec82 584 Pfam PF02690 Na+/Pi-cotransporter 34 173 1.6E-37 T 22-04-2016 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: REACT_15518 SMGD1_RS05190 d00b3c820d9652ea8ff45d1f49fb323a 124 PANTHER PTHR34773 1 118 4.3E-19 T 22-04-2016 SMGD1_RS05190 d00b3c820d9652ea8ff45d1f49fb323a 124 TIGRFAM TIGR00208 fliS: flagellar protein FliS 1 119 1.1E-34 T 22-04-2016 IPR003713 Flagellar protein FliS GO:0044780 SMGD1_RS05190 d00b3c820d9652ea8ff45d1f49fb323a 124 Gene3D G3DSA:1.20.120.340 4 120 5.0E-29 T 22-04-2016 IPR003713 Flagellar protein FliS GO:0044780 SMGD1_RS05190 d00b3c820d9652ea8ff45d1f49fb323a 124 SUPERFAMILY SSF101116 4 119 2.09E-30 T 22-04-2016 IPR003713 Flagellar protein FliS GO:0044780 SMGD1_RS05190 d00b3c820d9652ea8ff45d1f49fb323a 124 PIRSF PIRSF039090 1 124 2.2E-27 T 22-04-2016 IPR003713 Flagellar protein FliS GO:0044780 SMGD1_RS05190 d00b3c820d9652ea8ff45d1f49fb323a 124 Pfam PF02561 Flagellar protein FliS 8 119 7.4E-30 T 22-04-2016 IPR003713 Flagellar protein FliS GO:0044780 SMGD1_RS02130 bb0d5af21ed79d6339cde3e2f88478e5 117 Gene3D G3DSA:1.20.120.580 64 112 5.5E-4 T 22-04-2016 SMGD1_RS02130 bb0d5af21ed79d6339cde3e2f88478e5 117 Pfam PF01934 Protein of unknown function DUF86 16 113 2.7E-9 T 22-04-2016 IPR008201 Protein of unknown function DUF86 SMGD1_RS13010 3e8ad923f2e7e160de1f2c662130a0bd 124 Gene3D G3DSA:1.10.10.10 5 108 1.1E-37 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMGD1_RS13010 3e8ad923f2e7e160de1f2c662130a0bd 124 PANTHER PTHR33204 1 107 6.7E-36 T 22-04-2016 SMGD1_RS13010 3e8ad923f2e7e160de1f2c662130a0bd 124 SUPERFAMILY SSF46785 6 108 1.6E-30 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMGD1_RS13010 3e8ad923f2e7e160de1f2c662130a0bd 124 Pfam PF01638 HxlR-like helix-turn-helix 21 107 5.2E-31 T 22-04-2016 IPR002577 Helix-turn-helix, HxlR type SMGD1_RS05145 7887f1218db75d859a1eb6d3acbec2e9 360 SUPERFAMILY SSF53067 4 109 1.46E-25 T 22-04-2016 SMGD1_RS05145 7887f1218db75d859a1eb6d3acbec2e9 360 SUPERFAMILY SSF53067 141 335 1.46E-25 T 22-04-2016 SMGD1_RS05145 7887f1218db75d859a1eb6d3acbec2e9 360 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 3 360 36.904 T 22-04-2016 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17|UniPathway: UPA00343|UniPathway: UPA00544 SMGD1_RS05145 7887f1218db75d859a1eb6d3acbec2e9 360 Pfam PF03702 Uncharacterised protein family (UPF0075) 4 359 1.8E-133 T 22-04-2016 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17|UniPathway: UPA00343|UniPathway: UPA00544 SMGD1_RS05145 7887f1218db75d859a1eb6d3acbec2e9 360 PANTHER PTHR30605 1 359 1.7E-146 T 22-04-2016 SMGD1_RS05145 7887f1218db75d859a1eb6d3acbec2e9 360 PANTHER PTHR30605:SF2 1 359 1.7E-146 T 22-04-2016 SMGD1_RS05145 7887f1218db75d859a1eb6d3acbec2e9 360 Gene3D G3DSA:3.30.420.40 4 192 8.8E-67 T 22-04-2016 SMGD1_RS10795 0ff8a03fde8508c34e10f6010a4475e0 595 SMART SM00387 488 594 1.4E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS10795 0ff8a03fde8508c34e10f6010a4475e0 595 Gene3D G3DSA:3.30.565.10 451 590 1.3E-26 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS10795 0ff8a03fde8508c34e10f6010a4475e0 595 Pfam PF00989 PAS fold 206 311 2.9E-10 T 22-04-2016 IPR013767 PAS fold GO:0006355 SMGD1_RS10795 0ff8a03fde8508c34e10f6010a4475e0 595 PRINTS PR00344 Bacterial sensor protein C-terminal signature 525 539 2.6E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS10795 0ff8a03fde8508c34e10f6010a4475e0 595 PRINTS PR00344 Bacterial sensor protein C-terminal signature 556 574 2.6E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS10795 0ff8a03fde8508c34e10f6010a4475e0 595 PRINTS PR00344 Bacterial sensor protein C-terminal signature 543 553 2.6E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMGD1_RS10795 0ff8a03fde8508c34e10f6010a4475e0 595 Gene3D G3DSA:3.30.450.20 204 319 1.1E-18 T 22-04-2016 SMGD1_RS10795 0ff8a03fde8508c34e10f6010a4475e0 595 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 32 88 8.4E-8 T 22-04-2016 IPR029095 NarX-like, N-terminal SMGD1_RS10795 0ff8a03fde8508c34e10f6010a4475e0 595 SUPERFAMILY SSF55785 215 329 9.25E-18 T 22-04-2016 IPR000014 PAS domain SMGD1_RS10795 0ff8a03fde8508c34e10f6010a4475e0 595 PANTHER PTHR24423 1 16 6.6E-44 T 22-04-2016 SMGD1_RS10795 0ff8a03fde8508c34e10f6010a4475e0 595 PANTHER PTHR24423 184 336 6.6E-44 T 22-04-2016 SMGD1_RS10795 0ff8a03fde8508c34e10f6010a4475e0 595 PANTHER PTHR24423 375 590 6.6E-44 T 22-04-2016 SMGD1_RS10795 0ff8a03fde8508c34e10f6010a4475e0 595 SUPERFAMILY SSF55874 450 590 3.67E-25 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS10795 0ff8a03fde8508c34e10f6010a4475e0 595 SUPERFAMILY SSF47384 372 447 7.06E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS10795 0ff8a03fde8508c34e10f6010a4475e0 595 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 202 328 5.4E-18 T 22-04-2016 IPR000014 PAS domain SMGD1_RS10795 0ff8a03fde8508c34e10f6010a4475e0 595 SMART SM00091 203 270 1.7E-7 T 22-04-2016 IPR000014 PAS domain SMGD1_RS10795 0ff8a03fde8508c34e10f6010a4475e0 595 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 491 590 2.8E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS01435 a7cf49140a18953ad5407e75c4b3f84e 223 SMART SM00382 30 218 1.8E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain SMGD1_RS01435 a7cf49140a18953ad5407e75c4b3f84e 223 PANTHER PTHR24220 6 221 6.5E-75 T 22-04-2016 SMGD1_RS01435 a7cf49140a18953ad5407e75c4b3f84e 223 Pfam PF00005 ABC transporter 22 168 1.1E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMGD1_RS01435 a7cf49140a18953ad5407e75c4b3f84e 223 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMGD1_RS01435 a7cf49140a18953ad5407e75c4b3f84e 223 PANTHER PTHR24220:SF470 6 221 6.5E-75 T 22-04-2016 SMGD1_RS01435 a7cf49140a18953ad5407e75c4b3f84e 223 Gene3D G3DSA:3.40.50.300 3 219 4.2E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS01435 a7cf49140a18953ad5407e75c4b3f84e 223 SUPERFAMILY SSF52540 5 221 1.61E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS11895 f99bd6ab15a3955f3d42ad3bdd9ee99f 587 Pfam PF00361 Proton-conducting membrane transporter 170 435 4.3E-44 T 22-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 SMGD1_RS11895 f99bd6ab15a3955f3d42ad3bdd9ee99f 587 PANTHER PTHR22773 535 544 6.0E-57 T 22-04-2016 SMGD1_RS11895 f99bd6ab15a3955f3d42ad3bdd9ee99f 587 PANTHER PTHR22773 50 486 6.0E-57 T 22-04-2016 SMGD1_RS11895 f99bd6ab15a3955f3d42ad3bdd9ee99f 587 PANTHER PTHR22773:SF46 535 544 6.0E-57 T 22-04-2016 SMGD1_RS11895 f99bd6ab15a3955f3d42ad3bdd9ee99f 587 PANTHER PTHR22773:SF46 50 486 6.0E-57 T 22-04-2016 SMGD1_RS11895 f99bd6ab15a3955f3d42ad3bdd9ee99f 587 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 107 147 6.2E-7 T 22-04-2016 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal SMGD1_RS11895 f99bd6ab15a3955f3d42ad3bdd9ee99f 587 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 275 301 9.2E-22 T 22-04-2016 SMGD1_RS11895 f99bd6ab15a3955f3d42ad3bdd9ee99f 587 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 114 139 9.2E-22 T 22-04-2016 SMGD1_RS11895 f99bd6ab15a3955f3d42ad3bdd9ee99f 587 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 253 274 9.2E-22 T 22-04-2016 SMGD1_RS11895 f99bd6ab15a3955f3d42ad3bdd9ee99f 587 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 192 213 9.2E-22 T 22-04-2016 SMGD1_RS11895 f99bd6ab15a3955f3d42ad3bdd9ee99f 587 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 343 355 9.2E-22 T 22-04-2016 SMGD1_RS01265 d450e20d48d1d570034e5ce80b284c00 375 Pfam PF13395 HNH endonuclease 262 304 5.1E-8 T 22-04-2016 IPR003615 HNH nuclease SMGD1_RS07225 700f99a62b006850fc2f6c69ab0a9731 460 PANTHER PTHR32438:SF6 104 403 7.1E-25 T 22-04-2016 SMGD1_RS07225 700f99a62b006850fc2f6c69ab0a9731 460 SUPERFAMILY SSF50998 265 424 9.02E-6 T 22-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily SMGD1_RS07225 700f99a62b006850fc2f6c69ab0a9731 460 PANTHER PTHR32438 104 403 7.1E-25 T 22-04-2016 SMGD1_RS12370 9d046b7a2c685897ff48aa1d26880a6e 253 Pfam PF00194 Eukaryotic-type carbonic anhydrase 28 252 6.4E-49 T 22-04-2016 IPR001148 Alpha carbonic anhydrase SMGD1_RS12370 9d046b7a2c685897ff48aa1d26880a6e 253 Gene3D G3DSA:3.10.200.10 27 252 5.7E-68 T 22-04-2016 IPR001148 Alpha carbonic anhydrase SMGD1_RS12370 9d046b7a2c685897ff48aa1d26880a6e 253 SMART SM01057 29 252 3.9E-90 T 22-04-2016 IPR001148 Alpha carbonic anhydrase SMGD1_RS12370 9d046b7a2c685897ff48aa1d26880a6e 253 ProSitePatterns PS00162 Alpha-carbonic anhydrases signature. 121 137 - T 22-04-2016 IPR018338 Carbonic anhydrase, alpha-class, conserved site GO:0004089|GO:0006730|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 SMGD1_RS12370 9d046b7a2c685897ff48aa1d26880a6e 253 PANTHER PTHR18952:SF122 26 253 1.2E-77 T 22-04-2016 SMGD1_RS12370 9d046b7a2c685897ff48aa1d26880a6e 253 PANTHER PTHR18952 26 253 1.2E-77 T 22-04-2016 IPR023561 Carbonic anhydrase, alpha-class SMGD1_RS12370 9d046b7a2c685897ff48aa1d26880a6e 253 SUPERFAMILY SSF51069 27 251 6.78E-71 T 22-04-2016 IPR001148 Alpha carbonic anhydrase SMGD1_RS01385 4d18e84101ce858dfb22df6e14ea5d17 552 PANTHER PTHR24423 305 466 3.5E-36 T 22-04-2016 SMGD1_RS01385 4d18e84101ce858dfb22df6e14ea5d17 552 PANTHER PTHR24423 117 171 3.5E-36 T 22-04-2016 SMGD1_RS01385 4d18e84101ce858dfb22df6e14ea5d17 552 Gene3D G3DSA:1.20.120.160 453 549 3.7E-11 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SMGD1_RS01385 4d18e84101ce858dfb22df6e14ea5d17 552 SUPERFAMILY SSF52172 303 423 1.08E-30 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS01385 4d18e84101ce858dfb22df6e14ea5d17 552 Gene3D G3DSA:3.40.50.2300 305 422 2.5E-33 T 22-04-2016 SMGD1_RS01385 4d18e84101ce858dfb22df6e14ea5d17 552 SUPERFAMILY SSF47226 403 532 6.41E-11 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SMGD1_RS01385 4d18e84101ce858dfb22df6e14ea5d17 552 SMART SM00448 306 420 1.8E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS01385 4d18e84101ce858dfb22df6e14ea5d17 552 Pfam PF00072 Response regulator receiver domain 308 419 7.2E-21 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS09905 8da3f3293b584eded9972aaf42559652 164 PANTHER PTHR40547 1 154 1.2E-21 T 22-04-2016 SMGD1_RS09905 8da3f3293b584eded9972aaf42559652 164 PANTHER PTHR40547:SF1 1 154 1.2E-21 T 22-04-2016 SMGD1_RS09905 8da3f3293b584eded9972aaf42559652 164 Pfam PF09835 Uncharacterized protein conserved in bacteria (DUF2062) 18 155 2.1E-37 T 22-04-2016 IPR018639 Domain of unknown function DUF2062 SMGD1_RS09980 98aaf5f8e7b8c7672e80c956f7640198 173 SUPERFAMILY SSF56300 1 151 2.76E-19 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SMGD1_RS09980 98aaf5f8e7b8c7672e80c956f7640198 173 Gene3D G3DSA:3.60.21.10 1 152 1.4E-14 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SMGD1_RS09980 98aaf5f8e7b8c7672e80c956f7640198 173 Pfam PF00149 Calcineurin-like phosphoesterase 1 131 1.3E-11 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 SMGD1_RS05195 26f3b6c3b4e7596442d3fc0ea64ac796 458 PANTHER PTHR30288 1 455 6.6E-34 T 22-04-2016 SMGD1_RS05195 26f3b6c3b4e7596442d3fc0ea64ac796 458 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 10 106 4.2E-7 T 22-04-2016 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 SMGD1_RS05195 26f3b6c3b4e7596442d3fc0ea64ac796 458 PANTHER PTHR30288:SF0 1 455 6.6E-34 T 22-04-2016 SMGD1_RS05195 26f3b6c3b4e7596442d3fc0ea64ac796 458 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 214 439 3.5E-37 T 22-04-2016 IPR010809 Flagellar hook-associated 2, C-terminal GO:0007155|GO:0009288 SMGD1_RS13700 0ae634386c87ef37368c695f775d0ce1 273 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 141 5.2E-32 T 22-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G SMGD1_RS13700 0ae634386c87ef37368c695f775d0ce1 273 Pfam PF00460 Flagella basal body rod protein 11 35 1.7E-8 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 SMGD1_RS13700 0ae634386c87ef37368c695f775d0ce1 273 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 22-04-2016 IPR019776 Flagellar basal body rod protein, conserved site SMGD1_RS13700 0ae634386c87ef37368c695f775d0ce1 273 PANTHER PTHR30435:SF16 1 271 1.8E-46 T 22-04-2016 SMGD1_RS13700 0ae634386c87ef37368c695f775d0ce1 273 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 196 267 1.9E-11 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain SMGD1_RS13700 0ae634386c87ef37368c695f775d0ce1 273 PANTHER PTHR30435 1 271 1.8E-46 T 22-04-2016 SMGD1_RS13700 0ae634386c87ef37368c695f775d0ce1 273 SUPERFAMILY SSF117143 96 229 1.83E-17 T 22-04-2016 SMGD1_RS04570 10a8d57622c75fa555d9d41d3edee3f0 122 SUPERFAMILY SSF54913 14 105 3.5E-10 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta SMGD1_RS00555 9bc88edea67d7d8aed651030e174f3a6 81 Pfam PF01206 Sulfurtransferase TusA 12 80 3.4E-17 T 22-04-2016 IPR001455 TusA-like domain SMGD1_RS00555 9bc88edea67d7d8aed651030e174f3a6 81 SUPERFAMILY SSF64307 5 81 3.4E-21 T 22-04-2016 IPR001455 TusA-like domain SMGD1_RS00555 9bc88edea67d7d8aed651030e174f3a6 81 Gene3D G3DSA:3.30.110.40 9 80 2.2E-25 T 22-04-2016 IPR001455 TusA-like domain SMGD1_RS00555 9bc88edea67d7d8aed651030e174f3a6 81 PANTHER PTHR33279 10 81 1.9E-15 T 22-04-2016 SMGD1_RS14280 fcf371e26bc83489e741df0ff38f3457 271 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 8 91 4.8E-32 T 22-04-2016 IPR010627 Peptidase A24A, N-terminal KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- SMGD1_RS14280 fcf371e26bc83489e741df0ff38f3457 271 Pfam PF01478 Type IV leader peptidase family 103 230 4.1E-13 T 22-04-2016 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 SMGD1_RS14280 fcf371e26bc83489e741df0ff38f3457 271 PANTHER PTHR30487 1 267 1.6E-52 T 22-04-2016 SMGD1_RS05985 68ed9dab3f599a8e5617b0dd564ea057 795 Gene3D G3DSA:1.25.40.10 84 220 1.9E-13 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS05985 68ed9dab3f599a8e5617b0dd564ea057 795 Gene3D G3DSA:1.25.40.10 268 435 1.9E-13 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS05985 68ed9dab3f599a8e5617b0dd564ea057 795 SUPERFAMILY SSF48452 222 337 1.0E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS05985 68ed9dab3f599a8e5617b0dd564ea057 795 Pfam PF12770 CHAT domain 530 793 2.5E-70 T 22-04-2016 IPR024983 CHAT domain SMGD1_RS00040 41c65c6d0c4beb196f65d12d4568cb8f 1040 Pfam PF01578 Cytochrome C assembly protein 801 1005 2.4E-38 T 22-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 SMGD1_RS00040 41c65c6d0c4beb196f65d12d4568cb8f 1040 Pfam PF05140 ResB-like family 75 117 1.9E-5 T 22-04-2016 IPR007816 ResB-like domain SMGD1_RS00040 41c65c6d0c4beb196f65d12d4568cb8f 1040 Pfam PF05140 ResB-like family 342 416 1.1E-11 T 22-04-2016 IPR007816 ResB-like domain SMGD1_RS00040 41c65c6d0c4beb196f65d12d4568cb8f 1040 PANTHER PTHR30071:SF5 726 1039 3.8E-65 T 22-04-2016 SMGD1_RS00040 41c65c6d0c4beb196f65d12d4568cb8f 1040 PANTHER PTHR30071 726 1039 3.8E-65 T 22-04-2016 SMGD1_RS10945 abc84f81217366f1e6bea5f690d21cf9 289 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 50 250 7.7E-63 T 22-04-2016 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 SMGD1_RS10945 abc84f81217366f1e6bea5f690d21cf9 289 Gene3D G3DSA:3.90.226.10 26 142 1.2E-44 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SMGD1_RS10945 abc84f81217366f1e6bea5f690d21cf9 289 Gene3D G3DSA:3.90.226.10 180 263 1.2E-44 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SMGD1_RS10945 abc84f81217366f1e6bea5f690d21cf9 289 SUPERFAMILY SSF52096 179 238 1.74E-37 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SMGD1_RS10945 abc84f81217366f1e6bea5f690d21cf9 289 SUPERFAMILY SSF52096 27 150 1.74E-37 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SMGD1_RS10945 abc84f81217366f1e6bea5f690d21cf9 289 PANTHER PTHR33209 51 258 3.5E-56 T 22-04-2016 SMGD1_RS10945 abc84f81217366f1e6bea5f690d21cf9 289 Pfam PF01343 Peptidase family S49 102 250 1.0E-46 T 22-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 SMGD1_RS09270 24c093412247c129036721c05fa3504d 226 PANTHER PTHR21600:SF19 7 226 1.3E-51 T 22-04-2016 SMGD1_RS09270 24c093412247c129036721c05fa3504d 226 Pfam PF01479 S4 domain 7 52 1.8E-6 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SMGD1_RS09270 24c093412247c129036721c05fa3504d 226 Pfam PF00849 RNA pseudouridylate synthase 65 197 8.9E-12 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMGD1_RS09270 24c093412247c129036721c05fa3504d 226 SUPERFAMILY SSF55174 6 92 8.1E-10 T 22-04-2016 SMGD1_RS09270 24c093412247c129036721c05fa3504d 226 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 68 226 3.1E-37 T 22-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 SMGD1_RS09270 24c093412247c129036721c05fa3504d 226 SUPERFAMILY SSF55120 64 225 3.04E-33 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMGD1_RS09270 24c093412247c129036721c05fa3504d 226 Gene3D G3DSA:3.10.290.10 7 52 2.2E-10 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SMGD1_RS09270 24c093412247c129036721c05fa3504d 226 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 103 117 - T 22-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 SMGD1_RS09270 24c093412247c129036721c05fa3504d 226 PANTHER PTHR21600 7 226 1.3E-51 T 22-04-2016 SMGD1_RS07330 28b1dd8eab6f981f94f6554c6cb6e234 145 PANTHER PTHR39966 1 137 1.3E-16 T 22-04-2016 SMGD1_RS07330 28b1dd8eab6f981f94f6554c6cb6e234 145 Pfam PF01814 Hemerythrin HHE cation binding domain 6 125 2.9E-19 T 22-04-2016 IPR012312 Haemerythrin-like SMGD1_RS07330 28b1dd8eab6f981f94f6554c6cb6e234 145 Gene3D G3DSA:1.20.120.520 8 133 3.5E-19 T 22-04-2016 SMGD1_RS12155 385f2a2c50d09903702a7b6041922d11 503 SUPERFAMILY SSF52172 16 148 5.69E-28 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS12155 385f2a2c50d09903702a7b6041922d11 503 SMART SM00448 16 127 1.6E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS12155 385f2a2c50d09903702a7b6041922d11 503 Gene3D G3DSA:3.40.50.2300 16 139 3.9E-29 T 22-04-2016 SMGD1_RS12155 385f2a2c50d09903702a7b6041922d11 503 Pfam PF00072 Response regulator receiver domain 19 127 3.0E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS12155 385f2a2c50d09903702a7b6041922d11 503 PANTHER PTHR26402 481 495 7.6E-23 T 22-04-2016 SMGD1_RS12155 385f2a2c50d09903702a7b6041922d11 503 PANTHER PTHR26402 16 142 7.6E-23 T 22-04-2016 SMGD1_RS07280 e7299101db42b98bc12b5fc0604954e4 140 Gene3D G3DSA:2.40.70.10 4 131 4.5E-34 T 22-04-2016 IPR021109 Aspartic peptidase domain SMGD1_RS07280 e7299101db42b98bc12b5fc0604954e4 140 PANTHER PTHR38037 6 136 3.8E-23 T 22-04-2016 SMGD1_RS07280 e7299101db42b98bc12b5fc0604954e4 140 SUPERFAMILY SSF50630 6 136 4.08E-34 T 22-04-2016 IPR021109 Aspartic peptidase domain SMGD1_RS07280 e7299101db42b98bc12b5fc0604954e4 140 Pfam PF05618 Putative ATP-dependant zinc protease 6 138 5.0E-22 T 22-04-2016 SMGD1_RS11070 9553c0e1bbcee8c7f7218c874a0a3197 603 SUPERFAMILY SSF48208 274 414 2.04E-11 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 SMGD1_RS11070 9553c0e1bbcee8c7f7218c874a0a3197 603 Gene3D G3DSA:1.50.10.10 238 358 1.0E-4 T 22-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 SMGD1_RS04535 75ed115b339c541ffc05bad529a7f1f0 241 PANTHER PTHR30283 3 226 3.2E-13 T 22-04-2016 SMGD1_RS04535 75ed115b339c541ffc05bad529a7f1f0 241 Pfam PF03883 Protein of unknown function (DUF328) 2 226 1.5E-36 T 22-04-2016 IPR005583 Peroxide stress protein YaaA SMGD1_RS04535 75ed115b339c541ffc05bad529a7f1f0 241 PANTHER PTHR30283:SF3 3 226 3.2E-13 T 22-04-2016 SMGD1_RS06005 8f54b3fd7cc07c087f996ea401663745 86 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 15.848 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS06005 8f54b3fd7cc07c087f996ea401663745 86 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 12 83 3.0E-21 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS06005 8f54b3fd7cc07c087f996ea401663745 86 Gene3D G3DSA:1.20.58.110 1 86 4.7E-27 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS06005 8f54b3fd7cc07c087f996ea401663745 86 PANTHER PTHR33398 1 86 3.0E-24 T 22-04-2016 SMGD1_RS06005 8f54b3fd7cc07c087f996ea401663745 86 Pfam PF01649 Ribosomal protein S20 2 84 2.1E-25 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS06005 8f54b3fd7cc07c087f996ea401663745 86 SUPERFAMILY SSF46992 3 86 7.46E-26 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS06005 8f54b3fd7cc07c087f996ea401663745 86 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 85 3.7E-27 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS06190 ad1d2df089dd1b2cc47c4eacacca916a 180 Gene3D G3DSA:3.40.50.1580 8 178 4.0E-15 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SMGD1_RS06190 ad1d2df089dd1b2cc47c4eacacca916a 180 Pfam PF01048 Phosphorylase superfamily 14 172 1.6E-9 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SMGD1_RS06190 ad1d2df089dd1b2cc47c4eacacca916a 180 SUPERFAMILY SSF53167 7 176 3.53E-22 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SMGD1_RS02405 0c61886e3879db6b745390459f1f8c64 349 Pfam PF13692 Glycosyl transferases group 1 176 310 9.5E-13 T 22-04-2016 SMGD1_RS02405 0c61886e3879db6b745390459f1f8c64 349 SUPERFAMILY SSF53756 49 337 7.53E-25 T 22-04-2016 SMGD1_RS06720 0d84c1f8c53ff22dbfa75d4567ebca94 187 SUPERFAMILY SSF53254 1 182 4.53E-40 T 22-04-2016 IPR029033 Histidine phosphatase superfamily SMGD1_RS06720 0d84c1f8c53ff22dbfa75d4567ebca94 187 PANTHER PTHR23029:SF1 1 182 1.3E-35 T 22-04-2016 SMGD1_RS06720 0d84c1f8c53ff22dbfa75d4567ebca94 187 SMART SM00855 2 151 4.9E-14 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 SMGD1_RS06720 0d84c1f8c53ff22dbfa75d4567ebca94 187 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 184 4.0E-38 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 SMGD1_RS06720 0d84c1f8c53ff22dbfa75d4567ebca94 187 PANTHER PTHR23029 1 182 1.3E-35 T 22-04-2016 SMGD1_RS06720 0d84c1f8c53ff22dbfa75d4567ebca94 187 PIRSF PIRSF000709 1 182 2.1E-8 T 22-04-2016 SMGD1_RS06720 0d84c1f8c53ff22dbfa75d4567ebca94 187 Gene3D G3DSA:3.40.50.1240 1 178 8.3E-39 T 22-04-2016 IPR029033 Histidine phosphatase superfamily SMGD1_RS13830 0c07e35c56a338704478d559b1dba583 189 SUPERFAMILY SSF53335 13 178 3.92E-34 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS13830 0c07e35c56a338704478d559b1dba583 189 PANTHER PTHR10108 19 175 4.3E-26 T 22-04-2016 SMGD1_RS13830 0c07e35c56a338704478d559b1dba583 189 Pfam PF08241 Methyltransferase domain 41 131 8.3E-20 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 SMGD1_RS13830 0c07e35c56a338704478d559b1dba583 189 Gene3D G3DSA:3.40.50.150 19 179 7.5E-35 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS13690 864b8e3c5924c29e4146a8f994f5e6f5 706 SMART SM01049 208 280 2.8E-20 T 22-04-2016 IPR033480 Single Cache domain 2 SMGD1_RS13690 864b8e3c5924c29e4146a8f994f5e6f5 706 SMART SM01049 45 169 5.5E-28 T 22-04-2016 IPR033480 Single Cache domain 2 SMGD1_RS13690 864b8e3c5924c29e4146a8f994f5e6f5 706 Gene3D G3DSA:1.10.287.950 654 703 4.4E-44 T 22-04-2016 SMGD1_RS13690 864b8e3c5924c29e4146a8f994f5e6f5 706 Gene3D G3DSA:1.10.287.950 463 618 4.4E-44 T 22-04-2016 SMGD1_RS13690 864b8e3c5924c29e4146a8f994f5e6f5 706 Pfam PF08269 Cache domain 35 333 7.0E-105 T 22-04-2016 IPR004010 Double Cache domain 2 SMGD1_RS13690 864b8e3c5924c29e4146a8f994f5e6f5 706 SUPERFAMILY SSF58104 397 706 2.49E-58 T 22-04-2016 SMGD1_RS13690 864b8e3c5924c29e4146a8f994f5e6f5 706 PANTHER PTHR32089 233 706 3.3E-81 T 22-04-2016 SMGD1_RS13690 864b8e3c5924c29e4146a8f994f5e6f5 706 SMART SM00283 437 705 5.2E-41 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SMGD1_RS13690 864b8e3c5924c29e4146a8f994f5e6f5 706 Pfam PF00672 HAMP domain 357 425 4.1E-10 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SMGD1_RS13690 864b8e3c5924c29e4146a8f994f5e6f5 706 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 506 704 3.8E-41 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SMGD1_RS13690 864b8e3c5924c29e4146a8f994f5e6f5 706 SMART SM00304 653 702 57.0 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SMGD1_RS13690 864b8e3c5924c29e4146a8f994f5e6f5 706 SMART SM00304 375 429 5.4E-11 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SMGD1_RS13690 864b8e3c5924c29e4146a8f994f5e6f5 706 Gene3D G3DSA:3.30.450.20 69 221 3.5E-53 T 22-04-2016 SMGD1_RS13690 864b8e3c5924c29e4146a8f994f5e6f5 706 Gene3D G3DSA:3.30.450.20 224 333 5.9E-50 T 22-04-2016 SMGD1_RS01690 0345916ee7168b29352cc962a4cdcde3 185 PANTHER PTHR34478 1 185 5.3E-68 T 22-04-2016 SMGD1_RS01690 0345916ee7168b29352cc962a4cdcde3 185 Pfam PF04011 LemA family 6 180 3.9E-62 T 22-04-2016 IPR007156 LemA SMGD1_RS01690 0345916ee7168b29352cc962a4cdcde3 185 PANTHER PTHR34478:SF1 1 185 5.3E-68 T 22-04-2016 SMGD1_RS01690 0345916ee7168b29352cc962a4cdcde3 185 SUPERFAMILY SSF140478 22 169 8.11E-48 T 22-04-2016 IPR023353 LemA-like domain SMGD1_RS01690 0345916ee7168b29352cc962a4cdcde3 185 Gene3D G3DSA:1.20.1440.20 10 180 4.7E-57 T 22-04-2016 IPR023353 LemA-like domain SMGD1_RS05790 807446b6e2a8959f81af7441e0c26531 196 Gene3D G3DSA:3.30.310.70 67 189 1.5E-19 T 22-04-2016 IPR005180 Domain of unknown function DUF302 SMGD1_RS05790 807446b6e2a8959f81af7441e0c26531 196 SUPERFAMILY SSF103247 67 189 9.16E-24 T 22-04-2016 IPR005180 Domain of unknown function DUF302 SMGD1_RS05790 807446b6e2a8959f81af7441e0c26531 196 Pfam PF03625 Domain of unknown function DUF302 105 157 1.3E-8 T 22-04-2016 IPR005180 Domain of unknown function DUF302 SMGD1_RS09960 2f7b61b2119d4d7839f503e92688bbd1 200 SMART SM00671 85 120 7.7E-8 T 22-04-2016 IPR006597 Sel1-like repeat SMGD1_RS09960 2f7b61b2119d4d7839f503e92688bbd1 200 SMART SM00671 11 48 170.0 T 22-04-2016 IPR006597 Sel1-like repeat SMGD1_RS09960 2f7b61b2119d4d7839f503e92688bbd1 200 SMART SM00671 49 84 3.3E-8 T 22-04-2016 IPR006597 Sel1-like repeat SMGD1_RS09960 2f7b61b2119d4d7839f503e92688bbd1 200 SMART SM00671 121 156 7.2E-10 T 22-04-2016 IPR006597 Sel1-like repeat SMGD1_RS09960 2f7b61b2119d4d7839f503e92688bbd1 200 SMART SM00671 157 192 8.5 T 22-04-2016 IPR006597 Sel1-like repeat SMGD1_RS09960 2f7b61b2119d4d7839f503e92688bbd1 200 SUPERFAMILY SSF81901 23 199 4.97E-42 T 22-04-2016 SMGD1_RS09960 2f7b61b2119d4d7839f503e92688bbd1 200 Pfam PF08238 Sel1 repeat 172 192 31.0 T 22-04-2016 IPR006597 Sel1-like repeat SMGD1_RS09960 2f7b61b2119d4d7839f503e92688bbd1 200 Pfam PF08238 Sel1 repeat 90 120 0.0019 T 22-04-2016 IPR006597 Sel1-like repeat SMGD1_RS09960 2f7b61b2119d4d7839f503e92688bbd1 200 Pfam PF08238 Sel1 repeat 22 47 0.29 T 22-04-2016 IPR006597 Sel1-like repeat SMGD1_RS09960 2f7b61b2119d4d7839f503e92688bbd1 200 Pfam PF08238 Sel1 repeat 50 84 7.5E-6 T 22-04-2016 IPR006597 Sel1-like repeat SMGD1_RS09960 2f7b61b2119d4d7839f503e92688bbd1 200 Pfam PF08238 Sel1 repeat 123 156 2.9E-6 T 22-04-2016 IPR006597 Sel1-like repeat SMGD1_RS09960 2f7b61b2119d4d7839f503e92688bbd1 200 PANTHER PTHR11102 32 192 3.2E-31 T 22-04-2016 SMGD1_RS09960 2f7b61b2119d4d7839f503e92688bbd1 200 Gene3D G3DSA:1.25.40.10 116 196 5.6E-21 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS09960 2f7b61b2119d4d7839f503e92688bbd1 200 Gene3D G3DSA:1.25.40.10 30 115 5.9E-25 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS07130 10bd769682a6c0499148de4e0380fedb 270 SUPERFAMILY SSF51735 2 235 1.35E-58 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS07130 10bd769682a6c0499148de4e0380fedb 270 Pfam PF00106 short chain dehydrogenase 3 182 1.0E-44 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMGD1_RS07130 10bd769682a6c0499148de4e0380fedb 270 PANTHER PTHR24322 143 176 2.6E-47 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMGD1_RS07130 10bd769682a6c0499148de4e0380fedb 270 PANTHER PTHR24322 7 127 2.6E-47 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMGD1_RS07130 10bd769682a6c0499148de4e0380fedb 270 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 70 81 5.3E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMGD1_RS07130 10bd769682a6c0499148de4e0380fedb 270 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 123 131 5.3E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMGD1_RS07130 10bd769682a6c0499148de4e0380fedb 270 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 162 5.3E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMGD1_RS07130 10bd769682a6c0499148de4e0380fedb 270 PANTHER PTHR24322:SF397 143 176 2.6E-47 T 22-04-2016 SMGD1_RS07130 10bd769682a6c0499148de4e0380fedb 270 PANTHER PTHR24322:SF397 7 127 2.6E-47 T 22-04-2016 SMGD1_RS07130 10bd769682a6c0499148de4e0380fedb 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 117 133 5.4E-23 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMGD1_RS07130 10bd769682a6c0499148de4e0380fedb 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 181 5.4E-23 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMGD1_RS07130 10bd769682a6c0499148de4e0380fedb 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 143 162 5.4E-23 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMGD1_RS07130 10bd769682a6c0499148de4e0380fedb 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 70 81 5.4E-23 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMGD1_RS07130 10bd769682a6c0499148de4e0380fedb 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 5.4E-23 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMGD1_RS07130 10bd769682a6c0499148de4e0380fedb 270 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 130 158 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 SMGD1_RS07130 10bd769682a6c0499148de4e0380fedb 270 Gene3D G3DSA:3.40.50.720 2 236 5.3E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS02975 b6ea45260f2d887742d7d5b011c86672 164 Pfam PF01584 CheW-like domain 28 162 6.6E-35 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SMGD1_RS02975 b6ea45260f2d887742d7d5b011c86672 164 Gene3D G3DSA:2.40.50.180 67 111 2.3E-11 T 22-04-2016 SMGD1_RS02975 b6ea45260f2d887742d7d5b011c86672 164 PANTHER PTHR22617:SF33 7 163 5.7E-38 T 22-04-2016 SMGD1_RS02975 b6ea45260f2d887742d7d5b011c86672 164 PANTHER PTHR22617 7 163 5.7E-38 T 22-04-2016 SMGD1_RS02975 b6ea45260f2d887742d7d5b011c86672 164 SMART SM00260 24 160 8.1E-38 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SMGD1_RS02975 b6ea45260f2d887742d7d5b011c86672 164 SUPERFAMILY SSF50341 21 162 5.89E-36 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SMGD1_RS12705 df96670ad1d18313d3cd4ca67d07c9bc 469 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 2 461 7.4E-109 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ SMGD1_RS12705 df96670ad1d18313d3cd4ca67d07c9bc 469 PANTHER PTHR11206:SF90 215 426 3.3E-36 T 22-04-2016 SMGD1_RS12705 df96670ad1d18313d3cd4ca67d07c9bc 469 PANTHER PTHR11206:SF90 63 72 3.3E-36 T 22-04-2016 SMGD1_RS12705 df96670ad1d18313d3cd4ca67d07c9bc 469 PANTHER PTHR11206:SF90 110 115 3.3E-36 T 22-04-2016 SMGD1_RS12705 df96670ad1d18313d3cd4ca67d07c9bc 469 PRINTS PR01806 Virulence factor MviN signature 123 147 5.5E-52 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ SMGD1_RS12705 df96670ad1d18313d3cd4ca67d07c9bc 469 PRINTS PR01806 Virulence factor MviN signature 31 50 5.5E-52 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ SMGD1_RS12705 df96670ad1d18313d3cd4ca67d07c9bc 469 PRINTS PR01806 Virulence factor MviN signature 147 168 5.5E-52 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ SMGD1_RS12705 df96670ad1d18313d3cd4ca67d07c9bc 469 PRINTS PR01806 Virulence factor MviN signature 50 66 5.5E-52 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ SMGD1_RS12705 df96670ad1d18313d3cd4ca67d07c9bc 469 PRINTS PR01806 Virulence factor MviN signature 409 426 5.5E-52 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ SMGD1_RS12705 df96670ad1d18313d3cd4ca67d07c9bc 469 PRINTS PR01806 Virulence factor MviN signature 357 376 5.5E-52 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ SMGD1_RS12705 df96670ad1d18313d3cd4ca67d07c9bc 469 PRINTS PR01806 Virulence factor MviN signature 259 285 5.5E-52 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ SMGD1_RS12705 df96670ad1d18313d3cd4ca67d07c9bc 469 Pfam PF03023 MviN-like protein 27 455 7.4E-104 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ SMGD1_RS12705 df96670ad1d18313d3cd4ca67d07c9bc 469 PIRSF PIRSF002869 1 469 5.6E-117 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ SMGD1_RS12705 df96670ad1d18313d3cd4ca67d07c9bc 469 PANTHER PTHR11206 215 426 3.3E-36 T 22-04-2016 SMGD1_RS12705 df96670ad1d18313d3cd4ca67d07c9bc 469 PANTHER PTHR11206 63 72 3.3E-36 T 22-04-2016 SMGD1_RS12705 df96670ad1d18313d3cd4ca67d07c9bc 469 PANTHER PTHR11206 110 115 3.3E-36 T 22-04-2016 SMGD1_RS02805 b7f9a7816793701181a7e89c0b378ec8 359 PANTHER PTHR18866 2 356 1.2E-214 T 22-04-2016 SMGD1_RS02805 b7f9a7816793701181a7e89c0b378ec8 359 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 287 294 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SMGD1_RS02805 b7f9a7816793701181a7e89c0b378ec8 359 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 323 1.4E-79 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SMGD1_RS02805 b7f9a7816793701181a7e89c0b378ec8 359 Gene3D G3DSA:3.30.470.20 204 358 4.2E-70 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SMGD1_RS02805 b7f9a7816793701181a7e89c0b378ec8 359 Gene3D G3DSA:3.30.1490.20 131 203 2.4E-27 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SMGD1_RS02805 b7f9a7816793701181a7e89c0b378ec8 359 SUPERFAMILY SSF52440 2 113 5.83E-44 T 22-04-2016 IPR016185 Pre-ATP-grasp domain SMGD1_RS02805 b7f9a7816793701181a7e89c0b378ec8 359 SUPERFAMILY SSF56059 84 349 4.6E-70 T 22-04-2016 SMGD1_RS02805 b7f9a7816793701181a7e89c0b378ec8 359 Gene3D G3DSA:3.40.50.20 4 130 3.3E-48 T 22-04-2016 IPR016185 Pre-ATP-grasp domain SMGD1_RS02805 b7f9a7816793701181a7e89c0b378ec8 359 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SMGD1_RS02805 b7f9a7816793701181a7e89c0b378ec8 359 Pfam PF00289 Biotin carboxylase, N-terminal domain 4 111 4.0E-41 T 22-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain SMGD1_RS05415 ff48b66c01039d421c1e976647ee4e12 278 SUPERFAMILY SSF109998 19 155 6.67E-22 T 22-04-2016 IPR027304 Trigger factor/SurA domain SMGD1_RS05415 ff48b66c01039d421c1e976647ee4e12 278 Pfam PF13624 SurA N-terminal domain 47 122 5.8E-7 T 22-04-2016 SMGD1_RS08505 aeb9884c1220e4d23aab53a015891ad9 389 Pfam PF01098 Cell cycle protein 6 385 7.4E-82 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 SMGD1_RS08505 aeb9884c1220e4d23aab53a015891ad9 389 PANTHER PTHR30474 237 389 8.9E-77 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 SMGD1_RS08505 aeb9884c1220e4d23aab53a015891ad9 389 PANTHER PTHR30474 1 220 8.9E-77 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 SMGD1_RS08505 aeb9884c1220e4d23aab53a015891ad9 389 PANTHER PTHR30474:SF2 237 389 8.9E-77 T 22-04-2016 SMGD1_RS08505 aeb9884c1220e4d23aab53a015891ad9 389 PANTHER PTHR30474:SF2 1 220 8.9E-77 T 22-04-2016 SMGD1_RS08505 aeb9884c1220e4d23aab53a015891ad9 389 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 342 366 - T 22-04-2016 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 SMGD1_RS11490 3af9e2018af6f8e8e5606641b489d6f3 414 PRINTS PR00812 Bacterial general secretion pathway protein F signature 172 200 2.3E-10 T 22-04-2016 IPR003004 GspF/PilC family SMGD1_RS11490 3af9e2018af6f8e8e5606641b489d6f3 414 PRINTS PR00812 Bacterial general secretion pathway protein F signature 392 411 2.3E-10 T 22-04-2016 IPR003004 GspF/PilC family SMGD1_RS11490 3af9e2018af6f8e8e5606641b489d6f3 414 PRINTS PR00812 Bacterial general secretion pathway protein F signature 73 85 2.3E-10 T 22-04-2016 IPR003004 GspF/PilC family SMGD1_RS11490 3af9e2018af6f8e8e5606641b489d6f3 414 PRINTS PR00812 Bacterial general secretion pathway protein F signature 376 390 2.3E-10 T 22-04-2016 IPR003004 GspF/PilC family SMGD1_RS11490 3af9e2018af6f8e8e5606641b489d6f3 414 Pfam PF00482 Type II secretion system (T2SS), protein F 281 403 3.8E-23 T 22-04-2016 IPR018076 Type II secretion system F domain SMGD1_RS11490 3af9e2018af6f8e8e5606641b489d6f3 414 Pfam PF00482 Type II secretion system (T2SS), protein F 78 200 1.3E-25 T 22-04-2016 IPR018076 Type II secretion system F domain SMGD1_RS11490 3af9e2018af6f8e8e5606641b489d6f3 414 PANTHER PTHR30012:SF0 48 412 5.8E-94 T 22-04-2016 SMGD1_RS11490 3af9e2018af6f8e8e5606641b489d6f3 414 PANTHER PTHR30012 48 412 5.8E-94 T 22-04-2016 SMGD1_RS07905 63280c9bd51d14a385d324f447ef266e 270 Pfam PF11383 Protein of unknown function (DUF3187) 109 231 1.3E-5 T 22-04-2016 IPR021523 Protein of unknown function DUF3187 SMGD1_RS07905 63280c9bd51d14a385d324f447ef266e 270 SUPERFAMILY SSF103647 19 50 4.32E-5 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 SMGD1_RS07905 63280c9bd51d14a385d324f447ef266e 270 SUPERFAMILY SSF56935 62 270 2.29E-7 T 22-04-2016 SMGD1_RS04030 5a43e9be570dbfa57d591568fc50e1e2 564 SUPERFAMILY SSF47226 243 321 4.84E-10 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SMGD1_RS04030 5a43e9be570dbfa57d591568fc50e1e2 564 Gene3D G3DSA:1.20.120.160 259 325 2.1E-7 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SMGD1_RS04030 5a43e9be570dbfa57d591568fc50e1e2 564 SUPERFAMILY SSF47226 463 559 4.32E-5 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SMGD1_RS01555 965e02479c82e43f3767ad79858b58e2 145 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 9 128 1.8E-29 T 22-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 SMGD1_RS01555 965e02479c82e43f3767ad79858b58e2 145 SUPERFAMILY SSF47188 6 129 1.01E-28 T 22-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 SMGD1_RS01555 965e02479c82e43f3767ad79858b58e2 145 PANTHER PTHR37164 5 145 1.1E-16 T 22-04-2016 SMGD1_RS01555 965e02479c82e43f3767ad79858b58e2 145 Gene3D G3DSA:1.20.120.50 4 130 3.3E-30 T 22-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 SMGD1_RS01555 965e02479c82e43f3767ad79858b58e2 145 Pfam PF01814 Hemerythrin HHE cation binding domain 16 127 2.1E-11 T 22-04-2016 IPR012312 Haemerythrin-like SMGD1_RS01555 965e02479c82e43f3767ad79858b58e2 145 ProSitePatterns PS00550 Hemerythrin family signature. 61 84 - T 22-04-2016 IPR016131 Haemerythrin, iron-binding site GO:0046872 SMGD1_RS11665 34693d548169b72e80af3d19753a8a10 452 PANTHER PTHR10283 1 450 1.2E-90 T 22-04-2016 SMGD1_RS11665 34693d548169b72e80af3d19753a8a10 452 PANTHER PTHR10283:SF82 1 450 1.2E-90 T 22-04-2016 SMGD1_RS11665 34693d548169b72e80af3d19753a8a10 452 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 29 447 1.8E-62 T 22-04-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 SMGD1_RS11665 34693d548169b72e80af3d19753a8a10 452 Pfam PF00939 Sodium:sulfate symporter transmembrane region 28 449 1.8E-48 T 22-04-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 SMGD1_RS08160 af64bddb1821e40829d5bc6cd3103fa4 182 Pfam PF09624 Protein of unknown function (DUF2393) 23 174 3.5E-26 T 22-04-2016 IPR013417 Conserved hypothetical protein CHP02588 SMGD1_RS07975 f0bbdaa5d4f907be7d9ccbc9f8b042bf 406 Pfam PF02687 FtsX-like permease family 270 398 8.0E-15 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 SMGD1_RS07975 f0bbdaa5d4f907be7d9ccbc9f8b042bf 406 PANTHER PTHR30489 1 406 9.5E-32 T 22-04-2016 SMGD1_RS06330 9dba92b7e1503f1a927f3cec3c131ba8 176 PANTHER PTHR35446 1 171 8.5E-16 T 22-04-2016 SMGD1_RS06330 9dba92b7e1503f1a927f3cec3c131ba8 176 Pfam PF02627 Carboxymuconolactone decarboxylase family 58 120 3.6E-9 T 22-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 SMGD1_RS06330 9dba92b7e1503f1a927f3cec3c131ba8 176 SUPERFAMILY SSF69118 1 173 4.8E-40 T 22-04-2016 IPR029032 AhpD-like SMGD1_RS06330 9dba92b7e1503f1a927f3cec3c131ba8 176 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 60 106 1.6E-12 T 22-04-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 SMGD1_RS06330 9dba92b7e1503f1a927f3cec3c131ba8 176 Gene3D G3DSA:1.20.1290.10 61 173 2.3E-26 T 22-04-2016 IPR029032 AhpD-like SMGD1_RS02990 5ee728b1c4d226d00b3bbabab8252840 251 Gene3D G3DSA:3.60.21.10 12 127 1.7E-14 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SMGD1_RS02990 5ee728b1c4d226d00b3bbabab8252840 251 Gene3D G3DSA:3.60.21.10 168 220 1.7E-14 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SMGD1_RS02990 5ee728b1c4d226d00b3bbabab8252840 251 PANTHER PTHR34990 1 215 9.6E-16 T 22-04-2016 SMGD1_RS02990 5ee728b1c4d226d00b3bbabab8252840 251 SUPERFAMILY SSF56300 13 129 1.52E-18 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SMGD1_RS02990 5ee728b1c4d226d00b3bbabab8252840 251 SUPERFAMILY SSF56300 177 216 1.52E-18 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SMGD1_RS02990 5ee728b1c4d226d00b3bbabab8252840 251 Pfam PF00149 Calcineurin-like phosphoesterase 13 201 7.3E-7 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 SMGD1_RS05995 2535c7bacfdc29e8e6038915fa305a97 151 PANTHER PTHR33695:SF1 1 147 4.5E-19 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 SMGD1_RS05995 2535c7bacfdc29e8e6038915fa305a97 151 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 7 150 12.338 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 SMGD1_RS05995 2535c7bacfdc29e8e6038915fa305a97 151 TIGRFAM TIGR00077 lspA: signal peptidase II 10 147 8.4E-29 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 SMGD1_RS05995 2535c7bacfdc29e8e6038915fa305a97 151 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 125 141 8.1E-12 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 SMGD1_RS05995 2535c7bacfdc29e8e6038915fa305a97 151 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 90 105 8.1E-12 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 SMGD1_RS05995 2535c7bacfdc29e8e6038915fa305a97 151 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 48 56 8.1E-12 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 SMGD1_RS05995 2535c7bacfdc29e8e6038915fa305a97 151 ProSitePatterns PS00855 Signal peptidases II signature. 93 105 - T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 SMGD1_RS05995 2535c7bacfdc29e8e6038915fa305a97 151 PANTHER PTHR33695 1 147 4.5E-19 T 22-04-2016 SMGD1_RS05995 2535c7bacfdc29e8e6038915fa305a97 151 Pfam PF01252 Signal peptidase (SPase) II 18 141 3.0E-22 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 SMGD1_RS11590 83c149205c806a8c1b5ea0bf3d266906 403 PIRSF PIRSF006603 1 403 3.5E-88 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 SMGD1_RS11590 83c149205c806a8c1b5ea0bf3d266906 403 TIGRFAM TIGR00797 matE: MATE efflux family protein 2 367 9.2E-78 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 SMGD1_RS11590 83c149205c806a8c1b5ea0bf3d266906 403 Pfam PF01554 MatE 209 363 8.8E-29 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 SMGD1_RS11590 83c149205c806a8c1b5ea0bf3d266906 403 Pfam PF01554 MatE 2 140 5.4E-20 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 SMGD1_RS11590 83c149205c806a8c1b5ea0bf3d266906 403 PANTHER PTHR11206:SF95 6 398 2.5E-67 T 22-04-2016 SMGD1_RS11590 83c149205c806a8c1b5ea0bf3d266906 403 PANTHER PTHR11206 6 398 2.5E-67 T 22-04-2016 SMGD1_RS12565 7290e0b912c44a43862a5e503e95ecf8 356 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 2 330 4.6E-89 T 22-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 SMGD1_RS12565 7290e0b912c44a43862a5e503e95ecf8 356 PANTHER PTHR22893:SF14 2 355 2.9E-178 T 22-04-2016 SMGD1_RS12565 7290e0b912c44a43862a5e503e95ecf8 356 Gene3D G3DSA:3.20.20.70 2 355 3.3E-131 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMGD1_RS12565 7290e0b912c44a43862a5e503e95ecf8 356 PANTHER PTHR22893 2 355 2.9E-178 T 22-04-2016 SMGD1_RS12565 7290e0b912c44a43862a5e503e95ecf8 356 SUPERFAMILY SSF51395 2 356 6.41E-120 T 22-04-2016 SMGD1_RS10420 d3e5a8f19d791c282ad5d31d5d5faa34 489 SUPERFAMILY SSF51905 146 288 1.1E-5 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS10420 d3e5a8f19d791c282ad5d31d5d5faa34 489 SUPERFAMILY SSF51905 2 178 1.79E-18 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS10420 d3e5a8f19d791c282ad5d31d5d5faa34 489 PANTHER PTHR10632:SF7 335 353 4.7E-46 T 22-04-2016 SMGD1_RS10420 d3e5a8f19d791c282ad5d31d5d5faa34 489 PANTHER PTHR10632:SF7 372 391 4.7E-46 T 22-04-2016 SMGD1_RS10420 d3e5a8f19d791c282ad5d31d5d5faa34 489 PANTHER PTHR10632:SF7 1 318 4.7E-46 T 22-04-2016 SMGD1_RS10420 d3e5a8f19d791c282ad5d31d5d5faa34 489 Gene3D G3DSA:3.50.50.60 2 131 1.6E-15 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS10420 d3e5a8f19d791c282ad5d31d5d5faa34 489 PANTHER PTHR10632 335 353 4.7E-46 T 22-04-2016 SMGD1_RS10420 d3e5a8f19d791c282ad5d31d5d5faa34 489 PANTHER PTHR10632 372 391 4.7E-46 T 22-04-2016 SMGD1_RS10420 d3e5a8f19d791c282ad5d31d5d5faa34 489 PANTHER PTHR10632 1 318 4.7E-46 T 22-04-2016 SMGD1_RS10420 d3e5a8f19d791c282ad5d31d5d5faa34 489 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 320 6.5E-10 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS06180 1c5617d285172aacc424afc5920624b3 154 Pfam PF13682 Chemoreceptor zinc-binding domain 17 84 2.2E-8 T 22-04-2016 IPR025991 Chemoreceptor zinc-binding domain UniPathway: UPA00599 SMGD1_RS11010 fde3764f957fc0894fcbaf24d2efb82a 256 Gene3D G3DSA:3.40.50.450 27 220 1.8E-58 T 22-04-2016 SMGD1_RS11010 fde3764f957fc0894fcbaf24d2efb82a 256 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 44 219 5.0E-41 T 22-04-2016 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG SMGD1_RS11010 fde3764f957fc0894fcbaf24d2efb82a 256 PANTHER PTHR31223 13 219 4.9E-80 T 22-04-2016 SMGD1_RS11010 fde3764f957fc0894fcbaf24d2efb82a 256 PANTHER PTHR31223:SF1 13 219 4.9E-80 T 22-04-2016 SMGD1_RS11010 fde3764f957fc0894fcbaf24d2efb82a 256 Pfam PF03641 Possible lysine decarboxylase 86 216 6.3E-28 T 22-04-2016 IPR031100 LOG family SMGD1_RS11010 fde3764f957fc0894fcbaf24d2efb82a 256 SUPERFAMILY SSF102405 14 218 2.29E-53 T 22-04-2016 SMGD1_RS11990 1af9f171cc694e2a4c42b3c24419ed88 64 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 1 42 7.4E-8 T 22-04-2016 IPR019489 Clp ATPase, C-terminal SMGD1_RS11990 1af9f171cc694e2a4c42b3c24419ed88 64 Gene3D G3DSA:1.10.8.60 2 54 7.8E-7 T 22-04-2016 SMGD1_RS08665 25fb4ca4151c96d3105efbea6af37866 376 PANTHER PTHR34289:SF3 2 375 1.3E-37 T 22-04-2016 SMGD1_RS08665 25fb4ca4151c96d3105efbea6af37866 376 PANTHER PTHR34289 2 375 1.3E-37 T 22-04-2016 SMGD1_RS08665 25fb4ca4151c96d3105efbea6af37866 376 Pfam PF05684 Protein of unknown function (DUF819) 13 371 3.8E-77 T 22-04-2016 IPR008537 Protein of unknown function DUF819 SMGD1_RS04485 db4f4295e2b8a2c391544971c63f79df 59 Gene3D G3DSA:1.20.5.1030 4 58 2.6E-15 T 22-04-2016 SMGD1_RS04485 db4f4295e2b8a2c391544971c63f79df 59 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 7 58 6.1E-13 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 SMGD1_RS04485 db4f4295e2b8a2c391544971c63f79df 59 Hamap MF_00422 Protein translocase subunit SecE [secE]. 1 56 10.402 T 22-04-2016 IPR022943 Preprotein translocase subunit SecE SMGD1_RS04485 db4f4295e2b8a2c391544971c63f79df 59 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 7 57 2.1E-12 T 22-04-2016 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 SMGD1_RS11065 7b20f865bc2fe7a8dda6d5556bc9e7d6 947 Gene3D G3DSA:3.40.50.1820 61 188 5.1E-6 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SMGD1_RS11065 7b20f865bc2fe7a8dda6d5556bc9e7d6 947 Pfam PF09587 Bacterial capsule synthesis protein PGA_cap 423 669 1.0E-52 T 22-04-2016 IPR019079 Capsule synthesis protein, CapA SMGD1_RS11065 7b20f865bc2fe7a8dda6d5556bc9e7d6 947 Gene3D G3DSA:3.60.21.30 441 666 5.6E-14 T 22-04-2016 SMGD1_RS11065 7b20f865bc2fe7a8dda6d5556bc9e7d6 947 Gene3D G3DSA:1.25.40.10 228 398 4.4E-22 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS11065 7b20f865bc2fe7a8dda6d5556bc9e7d6 947 SUPERFAMILY SSF53474 51 207 2.91E-10 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SMGD1_RS11065 7b20f865bc2fe7a8dda6d5556bc9e7d6 947 PANTHER PTHR33393:SF2 383 672 7.0E-38 T 22-04-2016 SMGD1_RS11065 7b20f865bc2fe7a8dda6d5556bc9e7d6 947 SMART SM00028 331 364 200.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMGD1_RS11065 7b20f865bc2fe7a8dda6d5556bc9e7d6 947 SMART SM00028 365 398 8.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMGD1_RS11065 7b20f865bc2fe7a8dda6d5556bc9e7d6 947 SMART SM00028 228 261 190.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMGD1_RS11065 7b20f865bc2fe7a8dda6d5556bc9e7d6 947 SMART SM00028 262 295 1.3 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMGD1_RS11065 7b20f865bc2fe7a8dda6d5556bc9e7d6 947 SUPERFAMILY SSF48452 229 398 1.44E-21 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS11065 7b20f865bc2fe7a8dda6d5556bc9e7d6 947 Pfam PF13181 Tetratricopeptide repeat 372 397 0.11 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMGD1_RS11065 7b20f865bc2fe7a8dda6d5556bc9e7d6 947 PANTHER PTHR33393 383 672 7.0E-38 T 22-04-2016 SMGD1_RS11065 7b20f865bc2fe7a8dda6d5556bc9e7d6 947 SUPERFAMILY SSF56300 426 669 5.96E-27 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SMGD1_RS11065 7b20f865bc2fe7a8dda6d5556bc9e7d6 947 SMART SM00854 423 670 7.0E-47 T 22-04-2016 IPR019079 Capsule synthesis protein, CapA SMGD1_RS10595 7285521a926668c6efbf15a949c42a34 200 Pfam PF13599 Pentapeptide repeats (9 copies) 103 172 2.2E-11 T 22-04-2016 IPR001646 Pentapeptide repeat SMGD1_RS10595 7285521a926668c6efbf15a949c42a34 200 Pfam PF13599 Pentapeptide repeats (9 copies) 30 94 5.8E-12 T 22-04-2016 IPR001646 Pentapeptide repeat SMGD1_RS10595 7285521a926668c6efbf15a949c42a34 200 PANTHER PTHR14136:SF13 13 184 5.4E-33 T 22-04-2016 SMGD1_RS10595 7285521a926668c6efbf15a949c42a34 200 SUPERFAMILY SSF141571 16 197 1.08E-41 T 22-04-2016 SMGD1_RS10595 7285521a926668c6efbf15a949c42a34 200 PANTHER PTHR14136 13 184 5.4E-33 T 22-04-2016 SMGD1_RS13545 9aa9806bf58fbc89513f5f351390edf9 214 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 24 141 1.3E-49 T 22-04-2016 IPR012997 Rare lipoprotein A SMGD1_RS13545 9aa9806bf58fbc89513f5f351390edf9 214 PANTHER PTHR34183 2 118 3.0E-48 T 22-04-2016 SMGD1_RS13545 9aa9806bf58fbc89513f5f351390edf9 214 SUPERFAMILY SSF50685 27 112 2.62E-11 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain SMGD1_RS13545 9aa9806bf58fbc89513f5f351390edf9 214 Pfam PF03330 Lytic transglycolase 23 110 2.7E-26 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain SMGD1_RS13545 9aa9806bf58fbc89513f5f351390edf9 214 Gene3D G3DSA:2.40.40.10 61 111 2.4E-4 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain SMGD1_RS13545 9aa9806bf58fbc89513f5f351390edf9 214 PANTHER PTHR34183:SF1 2 118 3.0E-48 T 22-04-2016 SMGD1_RS11705 db604abb2aa7aa85e4b17671c858f299 156 Pfam PF05573 NosL 20 148 5.9E-18 T 22-04-2016 IPR008719 Nitrous oxide reductase accessory protein NosL SMGD1_RS11705 db604abb2aa7aa85e4b17671c858f299 156 SUPERFAMILY SSF160387 41 153 4.97E-25 T 22-04-2016 SMGD1_RS13565 53874a644e7637b68db9b140a839ee23 284 Hamap MF_00361 NAD kinase [nadK]. 7 282 31.909 T 22-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 SMGD1_RS13565 53874a644e7637b68db9b140a839ee23 284 Gene3D G3DSA:3.40.50.10330 4 146 1.6E-32 T 22-04-2016 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 SMGD1_RS13565 53874a644e7637b68db9b140a839ee23 284 PANTHER PTHR20275 3 284 5.9E-79 T 22-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 SMGD1_RS13565 53874a644e7637b68db9b140a839ee23 284 Gene3D G3DSA:2.60.200.30 147 257 1.4E-40 T 22-04-2016 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 SMGD1_RS13565 53874a644e7637b68db9b140a839ee23 284 SUPERFAMILY SSF111331 8 283 2.35E-80 T 22-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain SMGD1_RS13565 53874a644e7637b68db9b140a839ee23 284 Pfam PF01513 ATP-NAD kinase 60 266 1.4E-49 T 22-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 SMGD1_RS01885 f85c219c5977b8ecb559be22634673c9 632 SMART SM00283 48 337 1.1E-23 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SMGD1_RS01885 f85c219c5977b8ecb559be22634673c9 632 PANTHER PTHR32089 49 255 3.0E-27 T 22-04-2016 SMGD1_RS01885 f85c219c5977b8ecb559be22634673c9 632 PANTHER PTHR32089 569 631 3.0E-27 T 22-04-2016 SMGD1_RS01885 f85c219c5977b8ecb559be22634673c9 632 Gene3D G3DSA:1.10.287.950 80 236 1.8E-36 T 22-04-2016 SMGD1_RS01885 f85c219c5977b8ecb559be22634673c9 632 Gene3D G3DSA:1.10.287.950 438 621 3.2E-24 T 22-04-2016 SMGD1_RS01885 f85c219c5977b8ecb559be22634673c9 632 Gene3D G3DSA:1.10.287.950 279 327 1.8E-36 T 22-04-2016 SMGD1_RS01885 f85c219c5977b8ecb559be22634673c9 632 Gene3D G3DSA:1.10.287.950 346 402 3.2E-24 T 22-04-2016 SMGD1_RS01885 f85c219c5977b8ecb559be22634673c9 632 SUPERFAMILY SSF58104 339 631 4.71E-31 T 22-04-2016 SMGD1_RS01885 f85c219c5977b8ecb559be22634673c9 632 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 467 616 6.6E-19 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SMGD1_RS01885 f85c219c5977b8ecb559be22634673c9 632 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 126 333 2.8E-32 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SMGD1_RS01885 f85c219c5977b8ecb559be22634673c9 632 SUPERFAMILY SSF58104 90 334 2.75E-43 T 22-04-2016 SMGD1_RS01885 f85c219c5977b8ecb559be22634673c9 632 PANTHER PTHR32089:SF1 49 255 3.0E-27 T 22-04-2016 SMGD1_RS01885 f85c219c5977b8ecb559be22634673c9 632 PANTHER PTHR32089:SF1 569 631 3.0E-27 T 22-04-2016 SMGD1_RS12035 d05d042775fe27c8622236e8b74966d7 281 Gene3D G3DSA:3.40.50.970 13 258 2.4E-73 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SMGD1_RS12035 d05d042775fe27c8622236e8b74966d7 281 Pfam PF12367 Pyruvate ferredoxin oxidoreductase beta subunit C terminal 198 258 7.0E-23 T 22-04-2016 IPR032686 Pyruvate ferredoxin oxidoreductase beta subunit, C-terminal SMGD1_RS12035 d05d042775fe27c8622236e8b74966d7 281 PANTHER PTHR18968 6 280 3.1E-121 T 22-04-2016 SMGD1_RS12035 d05d042775fe27c8622236e8b74966d7 281 PANTHER PTHR18968:SF40 6 280 3.1E-121 T 22-04-2016 SMGD1_RS12035 d05d042775fe27c8622236e8b74966d7 281 TIGRFAM TIGR02177 PorB_KorB: 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate family 13 260 1.9E-102 T 22-04-2016 IPR011896 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate SMGD1_RS12035 d05d042775fe27c8622236e8b74966d7 281 SUPERFAMILY SSF52518 11 253 6.77E-69 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SMGD1_RS12035 d05d042775fe27c8622236e8b74966d7 281 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 52 194 2.2E-28 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 SMGD1_RS04560 df193ad8bd533fbd0ecdf4d6e9490cd9 280 PANTHER PTHR36838 1 280 3.7E-23 T 22-04-2016 SMGD1_RS04560 df193ad8bd533fbd0ecdf4d6e9490cd9 280 Pfam PF03547 Membrane transport protein 132 270 7.3E-7 T 22-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 SMGD1_RS04560 df193ad8bd533fbd0ecdf4d6e9490cd9 280 Pfam PF03547 Membrane transport protein 35 120 9.5E-11 T 22-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 SMGD1_RS06110 7e1fa37aa7f4fd7cb4e5636940409c38 112 Pfam PF03840 Preprotein translocase SecG subunit 5 72 2.0E-15 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 SMGD1_RS06110 7e1fa37aa7f4fd7cb4e5636940409c38 112 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 4 72 1.7E-18 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 SMGD1_RS06110 7e1fa37aa7f4fd7cb4e5636940409c38 112 PRINTS PR01651 Protein-export SecG membrane protein signature 1 19 7.6E-7 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 SMGD1_RS06110 7e1fa37aa7f4fd7cb4e5636940409c38 112 PRINTS PR01651 Protein-export SecG membrane protein signature 37 53 7.6E-7 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 SMGD1_RS06110 7e1fa37aa7f4fd7cb4e5636940409c38 112 PRINTS PR01651 Protein-export SecG membrane protein signature 53 75 7.6E-7 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 SMGD1_RS10465 625356fc23250edef4cce12f5d977747 315 Gene3D G3DSA:2.130.10.10 33 312 6.4E-23 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 SMGD1_RS10465 625356fc23250edef4cce12f5d977747 315 SUPERFAMILY SSF50998 31 313 1.65E-22 T 22-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily SMGD1_RS04230 d411aefb69aaf49c52aaa080b50664e0 218 SUPERFAMILY SSF53335 8 189 1.24E-19 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS04230 d411aefb69aaf49c52aaa080b50664e0 218 Gene3D G3DSA:3.40.50.150 17 189 8.7E-14 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS04230 d411aefb69aaf49c52aaa080b50664e0 218 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 96 102 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 SMGD1_RS08205 23c606118f03e91273a2ee716c451291 619 PANTHER PTHR11920 140 149 9.1E-57 T 22-04-2016 SMGD1_RS08205 23c606118f03e91273a2ee716c451291 619 PANTHER PTHR11920 429 618 9.1E-57 T 22-04-2016 SMGD1_RS08205 23c606118f03e91273a2ee716c451291 619 Pfam PF05226 CHASE2 domain 18 333 9.2E-43 T 22-04-2016 IPR007890 CHASE2 SMGD1_RS08205 23c606118f03e91273a2ee716c451291 619 Gene3D G3DSA:3.30.70.1230 433 617 2.5E-49 T 22-04-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 SMGD1_RS08205 23c606118f03e91273a2ee716c451291 619 SMART SM01080 12 340 3.5E-49 T 22-04-2016 IPR007890 CHASE2 SMGD1_RS08205 23c606118f03e91273a2ee716c451291 619 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 433 615 4.7E-38 T 22-04-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 SMGD1_RS08205 23c606118f03e91273a2ee716c451291 619 SUPERFAMILY SSF55073 433 617 6.75E-56 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS08205 23c606118f03e91273a2ee716c451291 619 PANTHER PTHR11920:SF341 140 149 9.1E-57 T 22-04-2016 SMGD1_RS08205 23c606118f03e91273a2ee716c451291 619 PANTHER PTHR11920:SF341 429 618 9.1E-57 T 22-04-2016 SMGD1_RS08205 23c606118f03e91273a2ee716c451291 619 SMART SM00044 401 599 8.7E-23 T 22-04-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 SMGD1_RS01460 596d624f242e46218b27b3e5a3fe309f 198 PANTHER PTHR39327:SF1 30 157 1.9E-31 T 22-04-2016 SMGD1_RS01460 596d624f242e46218b27b3e5a3fe309f 198 SUPERFAMILY SSF54001 34 106 6.87E-5 T 22-04-2016 SMGD1_RS01460 596d624f242e46218b27b3e5a3fe309f 198 Pfam PF06035 Bacterial transglutaminase-like cysteine proteinase BTLCP 26 152 2.7E-16 T 22-04-2016 IPR010319 Transglutaminase-like cysteine peptidase, predicted SMGD1_RS01460 596d624f242e46218b27b3e5a3fe309f 198 PANTHER PTHR39327 30 157 1.9E-31 T 22-04-2016 SMGD1_RS10660 b7e8f4270e55819b95e1027b14c4e5aa 310 PANTHER PTHR11228:SF25 4 208 5.5E-40 T 22-04-2016 SMGD1_RS10660 b7e8f4270e55819b95e1027b14c4e5aa 310 PANTHER PTHR11228 4 208 5.5E-40 T 22-04-2016 SMGD1_RS10660 b7e8f4270e55819b95e1027b14c4e5aa 310 SUPERFAMILY SSF102114 27 221 2.09E-23 T 22-04-2016 SMGD1_RS10660 b7e8f4270e55819b95e1027b14c4e5aa 310 Pfam PF04055 Radical SAM superfamily 25 185 4.5E-16 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SMGD1_RS10660 b7e8f4270e55819b95e1027b14c4e5aa 310 Gene3D G3DSA:3.20.20.70 26 207 1.0E-21 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMGD1_RS04375 4cb2fe5ef792e4b8862073047d0ae115 155 Gene3D G3DSA:3.30.700.10 8 147 6.3E-10 T 22-04-2016 SMGD1_RS04375 4cb2fe5ef792e4b8862073047d0ae115 155 SUPERFAMILY SSF54523 8 144 1.88E-17 T 22-04-2016 SMGD1_RS04375 4cb2fe5ef792e4b8862073047d0ae115 155 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 28 5.6E-7 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site SMGD1_RS04375 4cb2fe5ef792e4b8862073047d0ae115 155 Pfam PF07963 Prokaryotic N-terminal methylation motif 7 24 6.9E-6 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site SMGD1_RS02185 b6205165863d5345187d4d0edfc689c0 442 Gene3D G3DSA:2.40.160.10 33 442 1.3E-64 T 22-04-2016 IPR023614 Porin domain SMGD1_RS02185 b6205165863d5345187d4d0edfc689c0 442 Pfam PF03573 outer membrane porin, OprD family 33 442 2.3E-15 T 22-04-2016 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 SMGD1_RS07365 8dfd418da6aca7f492d705c77920e3b9 905 SUPERFAMILY SSF48371 443 544 4.76E-10 T 22-04-2016 IPR016024 Armadillo-type fold GO:0005488 SMGD1_RS07365 8dfd418da6aca7f492d705c77920e3b9 905 SUPERFAMILY SSF48371 791 811 4.76E-10 T 22-04-2016 IPR016024 Armadillo-type fold GO:0005488 SMGD1_RS07365 8dfd418da6aca7f492d705c77920e3b9 905 SUPERFAMILY SSF48371 571 708 4.76E-10 T 22-04-2016 IPR016024 Armadillo-type fold GO:0005488 SMGD1_RS07365 8dfd418da6aca7f492d705c77920e3b9 905 SUPERFAMILY SSF48371 850 902 4.76E-10 T 22-04-2016 IPR016024 Armadillo-type fold GO:0005488 SMGD1_RS07365 8dfd418da6aca7f492d705c77920e3b9 905 Gene3D G3DSA:1.25.10.10 789 810 1.3E-8 T 22-04-2016 IPR011989 Armadillo-like helical SMGD1_RS07365 8dfd418da6aca7f492d705c77920e3b9 905 Gene3D G3DSA:1.25.10.10 571 691 1.3E-8 T 22-04-2016 IPR011989 Armadillo-like helical SMGD1_RS07365 8dfd418da6aca7f492d705c77920e3b9 905 Gene3D G3DSA:1.25.10.10 875 902 1.3E-8 T 22-04-2016 IPR011989 Armadillo-like helical SMGD1_RS07365 8dfd418da6aca7f492d705c77920e3b9 905 SUPERFAMILY SSF103473 19 416 7.32E-17 T 22-04-2016 IPR020846 Major facilitator superfamily domain SMGD1_RS07365 8dfd418da6aca7f492d705c77920e3b9 905 Gene3D G3DSA:1.20.1250.20 211 418 3.8E-9 T 22-04-2016 SMGD1_RS07365 8dfd418da6aca7f492d705c77920e3b9 905 Gene3D G3DSA:1.20.1250.20 18 199 9.7E-7 T 22-04-2016 SMGD1_RS02200 30806af9164ccd40d47e5e1980a76d68 405 Gene3D G3DSA:3.30.565.10 261 400 1.1E-16 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS02200 30806af9164ccd40d47e5e1980a76d68 405 SUPERFAMILY SSF47384 188 252 3.34E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS02200 30806af9164ccd40d47e5e1980a76d68 405 SUPERFAMILY SSF55874 259 395 4.11E-16 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS02200 30806af9164ccd40d47e5e1980a76d68 405 SMART SM00388 193 255 2.8E-5 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMGD1_RS02200 30806af9164ccd40d47e5e1980a76d68 405 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 301 399 4.7E-5 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS02200 30806af9164ccd40d47e5e1980a76d68 405 SMART SM00387 299 404 3.6E-6 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS02200 30806af9164ccd40d47e5e1980a76d68 405 PANTHER PTHR24423 165 396 5.9E-16 T 22-04-2016 SMGD1_RS04175 c9b272a91a0c825a0a6b12f70f8a136f 109 Gene3D G3DSA:3.30.160.100 1 96 7.3E-18 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 SMGD1_RS04175 c9b272a91a0c825a0a6b12f70f8a136f 109 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 97 3.6E-14 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 SMGD1_RS04175 c9b272a91a0c825a0a6b12f70f8a136f 109 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 93 4.3E-14 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 SMGD1_RS04175 c9b272a91a0c825a0a6b12f70f8a136f 109 SUPERFAMILY SSF69754 1 101 9.03E-21 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 SMGD1_RS09315 0cc854a1a9051bb06bb5ee34b601fae6 87 Pfam PF01084 Ribosomal protein S18 19 68 3.3E-18 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS09315 0cc854a1a9051bb06bb5ee34b601fae6 87 Gene3D G3DSA:4.10.640.10 9 74 2.0E-23 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS09315 0cc854a1a9051bb06bb5ee34b601fae6 87 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 4 74 16.987 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS09315 0cc854a1a9051bb06bb5ee34b601fae6 87 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 72 2.0E-23 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS09315 0cc854a1a9051bb06bb5ee34b601fae6 87 PANTHER PTHR13479 5 75 2.3E-15 T 22-04-2016 SMGD1_RS09315 0cc854a1a9051bb06bb5ee34b601fae6 87 PRINTS PR00974 Ribosomal protein S18 family signature 47 61 4.4E-11 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS09315 0cc854a1a9051bb06bb5ee34b601fae6 87 PRINTS PR00974 Ribosomal protein S18 family signature 39 46 4.4E-11 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS09315 0cc854a1a9051bb06bb5ee34b601fae6 87 PRINTS PR00974 Ribosomal protein S18 family signature 61 71 4.4E-11 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS09315 0cc854a1a9051bb06bb5ee34b601fae6 87 PRINTS PR00974 Ribosomal protein S18 family signature 29 39 4.4E-11 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS09315 0cc854a1a9051bb06bb5ee34b601fae6 87 SUPERFAMILY SSF46911 4 74 1.1E-21 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS09315 0cc854a1a9051bb06bb5ee34b601fae6 87 TIGRFAM TIGR00165 S18: ribosomal protein bS18 6 72 8.6E-28 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMGD1_RS09315 0cc854a1a9051bb06bb5ee34b601fae6 87 PANTHER PTHR13479:SF42 5 75 2.3E-15 T 22-04-2016 SMGD1_RS01760 8fd98dc0332f88fa2b8c23c24e7f043f 275 PANTHER PTHR32552 1 270 1.0E-68 T 22-04-2016 SMGD1_RS01760 8fd98dc0332f88fa2b8c23c24e7f043f 275 SUPERFAMILY SSF53098 101 264 4.86E-40 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMGD1_RS01760 8fd98dc0332f88fa2b8c23c24e7f043f 275 Gene3D G3DSA:3.30.420.10 102 261 3.7E-34 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMGD1_RS01760 8fd98dc0332f88fa2b8c23c24e7f043f 275 Pfam PF13276 HTH-like domain 26 82 1.4E-10 T 22-04-2016 IPR025948 HTH-like domain SMGD1_RS01760 8fd98dc0332f88fa2b8c23c24e7f043f 275 Pfam PF00665 Integrase core domain 108 222 2.0E-30 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SMGD1_RS05940 8fd98dc0332f88fa2b8c23c24e7f043f 275 PANTHER PTHR32552 1 270 1.0E-68 T 22-04-2016 SMGD1_RS05940 8fd98dc0332f88fa2b8c23c24e7f043f 275 SUPERFAMILY SSF53098 101 264 4.86E-40 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMGD1_RS05940 8fd98dc0332f88fa2b8c23c24e7f043f 275 Gene3D G3DSA:3.30.420.10 102 261 3.7E-34 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMGD1_RS05940 8fd98dc0332f88fa2b8c23c24e7f043f 275 Pfam PF13276 HTH-like domain 26 82 1.4E-10 T 22-04-2016 IPR025948 HTH-like domain SMGD1_RS05940 8fd98dc0332f88fa2b8c23c24e7f043f 275 Pfam PF00665 Integrase core domain 108 222 2.0E-30 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SMGD1_RS02725 3a39483415cc081c8e1f11e00ee7a45d 272 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 163 174 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SMGD1_RS02725 3a39483415cc081c8e1f11e00ee7a45d 272 Pfam PF13187 4Fe-4S dicluster domain 163 209 1.5E-7 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SMGD1_RS02725 3a39483415cc081c8e1f11e00ee7a45d 272 SUPERFAMILY SSF54862 151 211 2.93E-14 T 22-04-2016 SMGD1_RS02725 3a39483415cc081c8e1f11e00ee7a45d 272 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 194 205 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SMGD1_RS02725 3a39483415cc081c8e1f11e00ee7a45d 272 Gene3D G3DSA:3.30.70.20 158 217 9.9E-13 T 22-04-2016 SMGD1_RS12225 264044fb36620fda723964259c7e89c3 332 SUPERFAMILY SSF50998 75 296 1.33E-7 T 22-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily SMGD1_RS06915 dfe3ad356ae23ca67ae1a52523ee7d1a 359 PANTHER PTHR30294 1 354 3.2E-25 T 22-04-2016 SMGD1_RS06915 dfe3ad356ae23ca67ae1a52523ee7d1a 359 Pfam PF12698 ABC-2 family transporter protein 22 348 4.9E-23 T 22-04-2016 SMGD1_RS10380 a191b46c7598e40c52b165d09f9e0720 149 PANTHER PTHR30625 4 145 5.0E-28 T 22-04-2016 SMGD1_RS10380 a191b46c7598e40c52b165d09f9e0720 149 TIGRFAM TIGR02805 exbB2: tonB-system energizer ExbB 11 142 7.0E-50 T 22-04-2016 IPR014172 TonB-system energizer ExbB type-2 GO:0006810|GO:0016020 SMGD1_RS10380 a191b46c7598e40c52b165d09f9e0720 149 Pfam PF01618 MotA/TolQ/ExbB proton channel family 56 140 4.3E-27 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 SMGD1_RS13505 1a08d472057b4eca1fd3bf1d1b01cbd9 593 SUPERFAMILY SSF56519 39 234 2.62E-31 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 SMGD1_RS13505 1a08d472057b4eca1fd3bf1d1b01cbd9 593 SUPERFAMILY SSF56601 236 590 1.11E-74 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SMGD1_RS13505 1a08d472057b4eca1fd3bf1d1b01cbd9 593 Gene3D G3DSA:3.90.1310.10 121 228 9.5E-22 T 22-04-2016 SMGD1_RS13505 1a08d472057b4eca1fd3bf1d1b01cbd9 593 Pfam PF03717 Penicillin-binding Protein dimerisation domain 46 221 2.0E-33 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 SMGD1_RS13505 1a08d472057b4eca1fd3bf1d1b01cbd9 593 Gene3D G3DSA:3.40.710.10 235 590 3.1E-83 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SMGD1_RS13505 1a08d472057b4eca1fd3bf1d1b01cbd9 593 Pfam PF00905 Penicillin binding protein transpeptidase domain 254 583 1.0E-50 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 SMGD1_RS13505 1a08d472057b4eca1fd3bf1d1b01cbd9 593 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 3 588 1.1E-164 T 22-04-2016 IPR017790 Penicillin-binding protein 2 GO:0016020 UniPathway: UPA00219 SMGD1_RS13505 1a08d472057b4eca1fd3bf1d1b01cbd9 593 PANTHER PTHR30627:SF2 1 593 4.7E-137 T 22-04-2016 SMGD1_RS13505 1a08d472057b4eca1fd3bf1d1b01cbd9 593 PANTHER PTHR30627 1 593 4.7E-137 T 22-04-2016 SMGD1_RS13835 3d0dac32400bd2b46bc56ebf2b03b6d5 198 Pfam PF11964 SpoIIAA-like 22 124 9.6E-15 T 22-04-2016 IPR021866 SpoIIAA-like SMGD1_RS13835 3d0dac32400bd2b46bc56ebf2b03b6d5 198 SUPERFAMILY SSF52091 1 125 2.04E-34 T 22-04-2016 IPR002645 STAS domain SMGD1_RS13835 3d0dac32400bd2b46bc56ebf2b03b6d5 198 Gene3D G3DSA:3.40.50.10600 2 125 1.4E-35 T 22-04-2016 IPR021866 SpoIIAA-like SMGD1_RS03860 4624905b3269e60742ea636156d55f1a 237 PANTHER PTHR39082 1 234 3.7E-23 T 22-04-2016 SMGD1_RS03860 4624905b3269e60742ea636156d55f1a 237 Pfam PF02591 C4-type zinc ribbon domain 198 230 3.1E-11 T 22-04-2016 IPR003743 C4-type zinc ribbon domain SMGD1_RS01585 d25970bfb70961596293d6598e813f8c 421 PIRSF PIRSF001434 1 421 9.7E-124 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SMGD1_RS01585 d25970bfb70961596293d6598e813f8c 421 PANTHER PTHR11808:SF12 263 421 6.2E-184 T 22-04-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 SMGD1_RS01585 d25970bfb70961596293d6598e813f8c 421 PANTHER PTHR11808:SF12 1 237 6.2E-184 T 22-04-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 SMGD1_RS01585 d25970bfb70961596293d6598e813f8c 421 PANTHER PTHR11808 263 421 6.2E-184 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SMGD1_RS01585 d25970bfb70961596293d6598e813f8c 421 PANTHER PTHR11808 1 237 6.2E-184 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SMGD1_RS01585 d25970bfb70961596293d6598e813f8c 421 Gene3D G3DSA:3.40.640.10 2 284 1.4E-102 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SMGD1_RS01585 d25970bfb70961596293d6598e813f8c 421 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 4 420 3.0E-131 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SMGD1_RS01585 d25970bfb70961596293d6598e813f8c 421 Gene3D G3DSA:3.90.1150.10 286 420 1.4E-47 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SMGD1_RS01585 d25970bfb70961596293d6598e813f8c 421 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 3 420 3.3E-171 T 22-04-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 SMGD1_RS01585 d25970bfb70961596293d6598e813f8c 421 SUPERFAMILY SSF53383 1 420 2.39E-110 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SMGD1_RS05710 636ca765bb878ff5f943efce5e7ff73c 63 PANTHER PTHR40069 1 63 2.9E-23 T 22-04-2016 SMGD1_RS05710 636ca765bb878ff5f943efce5e7ff73c 63 Pfam PF09962 Uncharacterized conserved protein (DUF2196) 2 62 1.3E-30 T 22-04-2016 IPR019240 Protein of unknown function DUF2196 SMGD1_RS05710 636ca765bb878ff5f943efce5e7ff73c 63 PANTHER PTHR40069:SF1 1 63 2.9E-23 T 22-04-2016 SMGD1_RS05710 636ca765bb878ff5f943efce5e7ff73c 63 TIGRFAM TIGR03833 TIGR03833: conserved hypothetical protein 2 63 4.0E-33 T 22-04-2016 IPR019240 Protein of unknown function DUF2196 SMGD1_RS05935 8a8a8828d998974f16eba41eee0757c4 216 SUPERFAMILY SSF52540 11 215 3.82E-20 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS05935 8a8a8828d998974f16eba41eee0757c4 216 Gene3D G3DSA:3.40.50.300 6 110 7.7E-22 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS05935 8a8a8828d998974f16eba41eee0757c4 216 PANTHER PTHR32039 3 215 8.5E-77 T 22-04-2016 SMGD1_RS05935 8a8a8828d998974f16eba41eee0757c4 216 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 122 213 1.7E-23 T 22-04-2016 IPR025158 Mg chelatase-related protein, C-terminal domain SMGD1_RS05935 8a8a8828d998974f16eba41eee0757c4 216 Pfam PF01078 Magnesium chelatase, subunit ChlI 2 116 3.5E-44 T 22-04-2016 IPR000523 Magnesium chelatase ChlI domain SMGD1_RS05935 8a8a8828d998974f16eba41eee0757c4 216 PANTHER PTHR32039:SF7 3 215 8.5E-77 T 22-04-2016 IPR004482 Mg chelatase-related protein SMGD1_RS05935 8a8a8828d998974f16eba41eee0757c4 216 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 11 26 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 SMGD1_RS00715 c871c8fbbc0f0c80161d54ddfe33b021 586 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 204 291 5.7E-5 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SMGD1_RS00715 c871c8fbbc0f0c80161d54ddfe33b021 586 Gene3D G3DSA:3.30.470.20 201 323 1.9E-17 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SMGD1_RS00715 c871c8fbbc0f0c80161d54ddfe33b021 586 Gene3D G3DSA:3.30.470.20 383 439 1.9E-17 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SMGD1_RS00715 c871c8fbbc0f0c80161d54ddfe33b021 586 PANTHER PTHR21621 367 447 2.5E-12 T 22-04-2016 SMGD1_RS00715 c871c8fbbc0f0c80161d54ddfe33b021 586 PANTHER PTHR21621 195 310 2.5E-12 T 22-04-2016 SMGD1_RS00715 c871c8fbbc0f0c80161d54ddfe33b021 586 SUPERFAMILY SSF56059 376 443 1.4E-20 T 22-04-2016 SMGD1_RS00715 c871c8fbbc0f0c80161d54ddfe33b021 586 SUPERFAMILY SSF56059 205 313 1.4E-20 T 22-04-2016 SMGD1_RS13440 da2baf0ef2012a779319025801513a2b 523 Pfam PF13193 AMP-binding enzyme C-terminal domain 434 508 4.3E-7 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain SMGD1_RS13440 da2baf0ef2012a779319025801513a2b 523 Gene3D G3DSA:3.40.50.980 4 167 4.3E-34 T 22-04-2016 SMGD1_RS13440 da2baf0ef2012a779319025801513a2b 523 Gene3D G3DSA:2.30.38.10 327 416 4.8E-17 T 22-04-2016 SMGD1_RS13440 da2baf0ef2012a779319025801513a2b 523 Gene3D G3DSA:3.40.50.980 168 319 7.5E-22 T 22-04-2016 SMGD1_RS13440 da2baf0ef2012a779319025801513a2b 523 Gene3D G3DSA:3.30.300.30 420 516 4.5E-17 T 22-04-2016 SMGD1_RS13440 da2baf0ef2012a779319025801513a2b 523 PANTHER PTHR24095 1 508 1.1E-74 T 22-04-2016 SMGD1_RS13440 da2baf0ef2012a779319025801513a2b 523 Pfam PF00501 AMP-binding enzyme 11 426 8.4E-68 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 SMGD1_RS13440 da2baf0ef2012a779319025801513a2b 523 SUPERFAMILY SSF56801 3 509 8.37E-100 T 22-04-2016 SMGD1_RS12865 de14e1ae48e98def310bfb796fa400a0 123 Gene3D G3DSA:1.10.3830.10 4 117 1.4E-28 T 22-04-2016 SMGD1_RS12865 de14e1ae48e98def310bfb796fa400a0 123 PANTHER PTHR34299 10 123 1.1E-18 T 22-04-2016 SMGD1_RS12865 de14e1ae48e98def310bfb796fa400a0 123 Pfam PF01219 Prokaryotic diacylglycerol kinase 16 116 3.7E-25 T 22-04-2016 IPR000829 Diacylglycerol kinase, prokaryotic GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 SMGD1_RS12865 de14e1ae48e98def310bfb796fa400a0 123 PANTHER PTHR34299:SF1 10 123 1.1E-18 T 22-04-2016 SMGD1_RS14135 0776bec07d06bb348195a98f8f474eab 823 Gene3D G3DSA:3.40.1140.10 3 84 5.9E-12 T 22-04-2016 SMGD1_RS14135 0776bec07d06bb348195a98f8f474eab 823 Gene3D G3DSA:3.40.1140.10 543 639 5.9E-12 T 22-04-2016 SMGD1_RS14135 0776bec07d06bb348195a98f8f474eab 823 Gene3D G3DSA:3.40.1140.10 118 127 5.9E-12 T 22-04-2016 SMGD1_RS14135 0776bec07d06bb348195a98f8f474eab 823 SUPERFAMILY SSF52540 10 55 4.38E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS14135 0776bec07d06bb348195a98f8f474eab 823 SUPERFAMILY SSF52540 419 627 4.38E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS14135 0776bec07d06bb348195a98f8f474eab 823 Pfam PF13166 AAA domain 24 739 9.4E-52 T 22-04-2016 IPR026866 P-loop containing protein CR006/PrrC SMGD1_RS01000 aa160d380abe3747506cee0df65ee522 858 SMART SM00248 804 833 2.7 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 SMGD1_RS01000 aa160d380abe3747506cee0df65ee522 858 SMART SM00248 577 606 37.0 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 SMGD1_RS01000 aa160d380abe3747506cee0df65ee522 858 SMART SM00248 651 680 0.02 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 SMGD1_RS01000 aa160d380abe3747506cee0df65ee522 858 SMART SM00248 611 646 920.0 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 SMGD1_RS01000 aa160d380abe3747506cee0df65ee522 858 Gene3D G3DSA:1.25.40.20 781 857 4.1E-28 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain SMGD1_RS01000 aa160d380abe3747506cee0df65ee522 858 Gene3D G3DSA:1.25.40.20 571 694 4.1E-28 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain SMGD1_RS01000 aa160d380abe3747506cee0df65ee522 858 PANTHER PTHR24198 21 35 3.5E-20 T 22-04-2016 SMGD1_RS01000 aa160d380abe3747506cee0df65ee522 858 PANTHER PTHR24198 781 858 3.5E-20 T 22-04-2016 SMGD1_RS01000 aa160d380abe3747506cee0df65ee522 858 PANTHER PTHR24198 578 694 3.5E-20 T 22-04-2016 SMGD1_RS01000 aa160d380abe3747506cee0df65ee522 858 Pfam PF12796 Ankyrin repeats (3 copies) 583 681 4.4E-10 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain SMGD1_RS01000 aa160d380abe3747506cee0df65ee522 858 SUPERFAMILY SSF48403 773 857 8.53E-25 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain SMGD1_RS01000 aa160d380abe3747506cee0df65ee522 858 SUPERFAMILY SSF48403 558 706 8.53E-25 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain SMGD1_RS03955 364c249bff56ecbd084abbfe4312caa6 629 SMART SM00327 85 253 5.1E-15 T 22-04-2016 IPR002035 von Willebrand factor, type A SMGD1_RS03955 364c249bff56ecbd084abbfe4312caa6 629 PANTHER PTHR22550 1 311 6.6E-29 T 22-04-2016 SMGD1_RS03955 364c249bff56ecbd084abbfe4312caa6 629 PANTHER PTHR22550:SF8 1 311 6.6E-29 T 22-04-2016 SMGD1_RS03955 364c249bff56ecbd084abbfe4312caa6 629 Gene3D G3DSA:1.25.40.10 353 460 3.7E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS03955 364c249bff56ecbd084abbfe4312caa6 629 Gene3D G3DSA:3.40.50.410 87 225 1.1E-9 T 22-04-2016 IPR002035 von Willebrand factor, type A SMGD1_RS03955 364c249bff56ecbd084abbfe4312caa6 629 SUPERFAMILY SSF48452 354 456 4.08E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS03955 364c249bff56ecbd084abbfe4312caa6 629 Pfam PF13519 von Willebrand factor type A domain 88 193 1.5E-12 T 22-04-2016 IPR002035 von Willebrand factor, type A SMGD1_RS03955 364c249bff56ecbd084abbfe4312caa6 629 SUPERFAMILY SSF53300 87 279 1.31E-20 T 22-04-2016 IPR002035 von Willebrand factor, type A SMGD1_RS13075 ff19b215968dc7e1c9c820ae2f28149f 81 SMART SM00363 1 60 8.6E-5 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SMGD1_RS13075 ff19b215968dc7e1c9c820ae2f28149f 81 PIRSF PIRSF038881 1 81 9.3E-20 T 22-04-2016 IPR025490 RNA-binding protein, HP1423 type SMGD1_RS13075 ff19b215968dc7e1c9c820ae2f28149f 81 Gene3D G3DSA:3.10.290.10 1 78 2.9E-17 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SMGD1_RS13075 ff19b215968dc7e1c9c820ae2f28149f 81 Pfam PF01479 S4 domain 1 47 1.9E-7 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SMGD1_RS13075 ff19b215968dc7e1c9c820ae2f28149f 81 SUPERFAMILY SSF55174 1 78 2.75E-15 T 22-04-2016 SMGD1_RS01915 781591f4b0115630862ec5b4838378ef 360 SUPERFAMILY SSF64182 3 345 2.75E-13 T 22-04-2016 SMGD1_RS13455 34be989538acfe8e4c2044864bf6e918 136 Pfam PF02310 B12 binding domain 1 93 3.4E-9 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 SMGD1_RS13455 34be989538acfe8e4c2044864bf6e918 136 Gene3D G3DSA:3.40.50.280 1 135 2.0E-26 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 SMGD1_RS13455 34be989538acfe8e4c2044864bf6e918 136 SUPERFAMILY SSF52242 1 117 6.15E-23 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 SMGD1_RS06115 4809c65bcfe47048e6a27fe704e525e9 185 PANTHER PTHR20982 1 185 1.5E-61 T 22-04-2016 IPR002661 Ribosome recycling factor GO:0006412 SMGD1_RS06115 4809c65bcfe47048e6a27fe704e525e9 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 11 185 2.8E-64 T 22-04-2016 IPR002661 Ribosome recycling factor GO:0006412 SMGD1_RS06115 4809c65bcfe47048e6a27fe704e525e9 185 SUPERFAMILY SSF55194 3 184 5.36E-61 T 22-04-2016 IPR023584 Ribosome recycling factor domain SMGD1_RS06115 4809c65bcfe47048e6a27fe704e525e9 185 Gene3D G3DSA:1.10.132.20 66 185 3.7E-37 T 22-04-2016 IPR023584 Ribosome recycling factor domain SMGD1_RS06115 4809c65bcfe47048e6a27fe704e525e9 185 Pfam PF01765 Ribosome recycling factor 21 183 1.5E-52 T 22-04-2016 IPR023584 Ribosome recycling factor domain SMGD1_RS06115 4809c65bcfe47048e6a27fe704e525e9 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 23.449 T 22-04-2016 IPR002661 Ribosome recycling factor GO:0006412 SMGD1_RS00250 9c07b2ccc1b908f64f5f67fe0b4e2c1a 130 ProSitePatterns PS00194 Thioredoxin family active site. 39 57 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 SMGD1_RS00250 9c07b2ccc1b908f64f5f67fe0b4e2c1a 130 Gene3D G3DSA:3.40.30.10 18 128 1.0E-19 T 22-04-2016 IPR012336 Thioredoxin-like fold SMGD1_RS00250 9c07b2ccc1b908f64f5f67fe0b4e2c1a 130 Pfam PF13899 Thioredoxin-like 21 84 9.5E-10 T 22-04-2016 SMGD1_RS00250 9c07b2ccc1b908f64f5f67fe0b4e2c1a 130 SUPERFAMILY SSF52833 5 126 7.6E-24 T 22-04-2016 IPR012336 Thioredoxin-like fold SMGD1_RS07185 829eaa5beeeecfa88c208b5283db678b 231 SUPERFAMILY SSF51735 5 222 1.25E-9 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS07185 829eaa5beeeecfa88c208b5283db678b 231 Gene3D G3DSA:3.40.50.720 60 176 3.3E-8 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS14155 9ec1edc6aff2b58116741601ab938f8a 399 PANTHER PTHR32468 4 397 3.4E-103 T 22-04-2016 SMGD1_RS14155 9ec1edc6aff2b58116741601ab938f8a 399 Pfam PF00999 Sodium/hydrogen exchanger family 11 390 2.9E-69 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 SMGD1_RS14155 9ec1edc6aff2b58116741601ab938f8a 399 PANTHER PTHR32468:SF4 4 397 3.4E-103 T 22-04-2016 SMGD1_RS07735 0805d56bb6ba4df0e6d50436e487c2e9 428 Gene3D G3DSA:2.40.160.10 59 422 1.8E-13 T 22-04-2016 IPR023614 Porin domain SMGD1_RS02400 4f61e221c279edc454ae3d5919dfe992 296 PANTHER PTHR22572:SF105 2 295 1.2E-159 T 22-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 SMGD1_RS02400 4f61e221c279edc454ae3d5919dfe992 296 PANTHER PTHR22572 2 295 1.2E-159 T 22-04-2016 SMGD1_RS02400 4f61e221c279edc454ae3d5919dfe992 296 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 2 287 5.7E-147 T 22-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 SMGD1_RS02400 4f61e221c279edc454ae3d5919dfe992 296 Pfam PF00483 Nucleotidyl transferase 2 241 2.3E-69 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 SMGD1_RS02400 4f61e221c279edc454ae3d5919dfe992 296 SUPERFAMILY SSF53448 2 287 1.73E-88 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMGD1_RS02400 4f61e221c279edc454ae3d5919dfe992 296 Gene3D G3DSA:3.90.550.10 2 267 1.8E-65 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMGD1_RS05960 0b021497cb251253f4e275204b977157 252 Pfam PF00561 alpha/beta hydrolase fold 1 221 1.0E-17 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SMGD1_RS05960 0b021497cb251253f4e275204b977157 252 SUPERFAMILY SSF53474 1 233 1.05E-37 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SMGD1_RS05960 0b021497cb251253f4e275204b977157 252 PANTHER PTHR10992 1 233 7.6E-33 T 22-04-2016 SMGD1_RS05960 0b021497cb251253f4e275204b977157 252 Gene3D G3DSA:3.40.50.1820 1 233 1.5E-38 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SMGD1_RS05960 0b021497cb251253f4e275204b977157 252 PRINTS PR00111 Alpha/beta hydrolase fold signature 81 94 2.6E-13 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SMGD1_RS05960 0b021497cb251253f4e275204b977157 252 PRINTS PR00111 Alpha/beta hydrolase fold signature 67 80 2.6E-13 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SMGD1_RS05960 0b021497cb251253f4e275204b977157 252 PRINTS PR00111 Alpha/beta hydrolase fold signature 184 198 2.6E-13 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SMGD1_RS05960 0b021497cb251253f4e275204b977157 252 PRINTS PR00111 Alpha/beta hydrolase fold signature 22 37 2.6E-13 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SMGD1_RS11580 dfe59700d4917b7248c8ffa37d204e1d 401 Gene3D G3DSA:1.20.1250.20 225 395 3.6E-7 T 22-04-2016 SMGD1_RS11580 dfe59700d4917b7248c8ffa37d204e1d 401 SUPERFAMILY SSF103473 13 394 3.92E-32 T 22-04-2016 IPR020846 Major facilitator superfamily domain SMGD1_RS11580 dfe59700d4917b7248c8ffa37d204e1d 401 Pfam PF07690 Major Facilitator Superfamily 19 241 1.1E-19 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SMGD1_RS11580 dfe59700d4917b7248c8ffa37d204e1d 401 PANTHER PTHR23513 1 391 9.1E-43 T 22-04-2016 SMGD1_RS11580 dfe59700d4917b7248c8ffa37d204e1d 401 Gene3D G3DSA:1.20.1250.20 17 189 7.5E-16 T 22-04-2016 SMGD1_RS06625 26fd151009c97a7487b76cfe4ffc0a44 420 SUPERFAMILY SSF56935 71 401 3.89E-11 T 22-04-2016 SMGD1_RS06625 26fd151009c97a7487b76cfe4ffc0a44 420 Gene3D G3DSA:2.40.160.10 77 409 1.9E-15 T 22-04-2016 IPR023614 Porin domain SMGD1_RS06625 26fd151009c97a7487b76cfe4ffc0a44 420 PANTHER PTHR11603:SF148 33 412 4.7E-35 T 22-04-2016 SMGD1_RS06625 26fd151009c97a7487b76cfe4ffc0a44 420 PANTHER PTHR11603 33 412 4.7E-35 T 22-04-2016 SMGD1_RS06600 61d2a2b13e1af1568c41b2c84eebabf2 105 SUPERFAMILY SSF140663 10 93 4.58E-12 T 22-04-2016 IPR023203 TTHA0068-like domain SMGD1_RS06600 61d2a2b13e1af1568c41b2c84eebabf2 105 Pfam PF03745 Domain of unknown function (DUF309) 10 71 1.4E-15 T 22-04-2016 IPR005500 Protein of unknown function DUF309 SMGD1_RS06600 61d2a2b13e1af1568c41b2c84eebabf2 105 Gene3D G3DSA:1.10.3450.10 7 68 3.1E-9 T 22-04-2016 IPR023203 TTHA0068-like domain SMGD1_RS09685 0a801fbea302dba91c68627f8209b25b 343 Pfam PF01594 Domain of unknown function DUF20 10 321 1.0E-55 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like SMGD1_RS09685 0a801fbea302dba91c68627f8209b25b 343 PANTHER PTHR21716:SF17 10 341 2.3E-106 T 22-04-2016 SMGD1_RS09685 0a801fbea302dba91c68627f8209b25b 343 PANTHER PTHR21716 10 341 2.3E-106 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like SMGD1_RS06445 4eba8842b8f624f1796beaa70098f8a2 491 Pfam PF02120 Flagellar hook-length control protein FliK 371 447 7.1E-12 T 22-04-2016 IPR021136 Flagellar hook-length control protein-like, C-terminal SMGD1_RS14450 b399930b4adb93853f60491bb6561031 221 PANTHER PTHR33121:SF13 1 219 6.5E-67 T 22-04-2016 SMGD1_RS14450 b399930b4adb93853f60491bb6561031 221 Pfam PF00563 EAL domain 2 207 2.2E-61 T 22-04-2016 IPR001633 EAL domain SMGD1_RS14450 b399930b4adb93853f60491bb6561031 221 SMART SM00052 1 212 2.3E-78 T 22-04-2016 IPR001633 EAL domain SMGD1_RS14450 b399930b4adb93853f60491bb6561031 221 SUPERFAMILY SSF141868 1 219 1.23E-74 T 22-04-2016 IPR001633 EAL domain SMGD1_RS14450 b399930b4adb93853f60491bb6561031 221 Gene3D G3DSA:3.20.20.450 1 219 1.1E-82 T 22-04-2016 IPR001633 EAL domain SMGD1_RS14450 b399930b4adb93853f60491bb6561031 221 PANTHER PTHR33121 1 219 6.5E-67 T 22-04-2016 SMGD1_RS14225 67301df02a9a59bdaba23d39a6882e24 212 Gene3D G3DSA:3.40.50.300 20 172 2.4E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS14225 67301df02a9a59bdaba23d39a6882e24 212 Pfam PF00271 Helicase conserved C-terminal domain 34 129 1.0E-11 T 22-04-2016 IPR001650 Helicase, C-terminal SMGD1_RS14225 67301df02a9a59bdaba23d39a6882e24 212 SUPERFAMILY SSF52540 23 181 9.7E-22 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS14225 67301df02a9a59bdaba23d39a6882e24 212 PANTHER PTHR24031 23 205 2.7E-18 T 22-04-2016 SMGD1_RS14225 67301df02a9a59bdaba23d39a6882e24 212 PANTHER PTHR24031:SF316 23 205 2.7E-18 T 22-04-2016 SMGD1_RS12610 6c20b262e3ef7a9e34ade72d382ab313 243 PANTHER PTHR31040 1 239 1.4E-34 T 22-04-2016 SMGD1_RS12610 6c20b262e3ef7a9e34ade72d382ab313 243 Pfam PF07298 NnrU protein 55 235 4.8E-6 T 22-04-2016 IPR009915 NnrU domain SMGD1_RS11445 4f88d6105b636801053609ab8f86d4f1 250 Gene3D G3DSA:1.10.10.60 195 243 4.9E-4 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SMGD1_RS11445 4f88d6105b636801053609ab8f86d4f1 250 SUPERFAMILY SSF52540 21 137 2.23E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS11445 4f88d6105b636801053609ab8f86d4f1 250 SUPERFAMILY SSF46689 196 244 8.51E-5 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SMGD1_RS04760 4d4a55227c3c814f70d4b73bc75cdc9d 77 PIRSF PIRSF037031 1 77 9.4E-30 T 22-04-2016 IPR005243 Redox-active disulphide protein 2 SMGD1_RS04760 4d4a55227c3c814f70d4b73bc75cdc9d 77 SUPERFAMILY SSF52833 1 73 4.28E-18 T 22-04-2016 IPR012336 Thioredoxin-like fold SMGD1_RS04760 4d4a55227c3c814f70d4b73bc75cdc9d 77 Pfam PF13192 Thioredoxin domain 1 75 6.3E-24 T 22-04-2016 IPR012336 Thioredoxin-like fold SMGD1_RS04760 4d4a55227c3c814f70d4b73bc75cdc9d 77 PANTHER PTHR36450:SF1 1 70 3.2E-26 T 22-04-2016 SMGD1_RS04760 4d4a55227c3c814f70d4b73bc75cdc9d 77 PANTHER PTHR36450 1 70 3.2E-26 T 22-04-2016 SMGD1_RS04760 4d4a55227c3c814f70d4b73bc75cdc9d 77 Gene3D G3DSA:3.40.30.10 1 75 2.4E-26 T 22-04-2016 IPR012336 Thioredoxin-like fold SMGD1_RS10435 e8c82b7b4ae5c88f4db41ae7854d2c42 249 SUPERFAMILY SSF52172 5 139 1.42E-31 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS10435 e8c82b7b4ae5c88f4db41ae7854d2c42 249 Pfam PF00072 Response regulator receiver domain 6 116 1.5E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS10435 e8c82b7b4ae5c88f4db41ae7854d2c42 249 SUPERFAMILY SSF46894 162 248 1.7E-17 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SMGD1_RS10435 e8c82b7b4ae5c88f4db41ae7854d2c42 249 Pfam PF00486 Transcriptional regulatory protein, C terminal 177 246 1.9E-13 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMGD1_RS10435 e8c82b7b4ae5c88f4db41ae7854d2c42 249 SMART SM00448 4 116 5.7E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS10435 e8c82b7b4ae5c88f4db41ae7854d2c42 249 Gene3D G3DSA:1.10.10.10 163 248 1.1E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMGD1_RS10435 e8c82b7b4ae5c88f4db41ae7854d2c42 249 SMART SM00862 177 247 9.0E-14 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMGD1_RS10435 e8c82b7b4ae5c88f4db41ae7854d2c42 249 PANTHER PTHR26402 161 249 4.5E-40 T 22-04-2016 SMGD1_RS10435 e8c82b7b4ae5c88f4db41ae7854d2c42 249 PANTHER PTHR26402 4 134 4.5E-40 T 22-04-2016 SMGD1_RS10435 e8c82b7b4ae5c88f4db41ae7854d2c42 249 Gene3D G3DSA:3.40.50.2300 4 129 9.7E-29 T 22-04-2016 SMGD1_RS08975 24cad5b05d95c596839f17a5448a8bf7 433 SMART SM00729 140 358 3.8E-51 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 SMGD1_RS08975 24cad5b05d95c596839f17a5448a8bf7 433 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 4 432 5.4E-169 T 22-04-2016 SMGD1_RS08975 24cad5b05d95c596839f17a5448a8bf7 433 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 3 433 62.279 T 22-04-2016 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 SMGD1_RS08975 24cad5b05d95c596839f17a5448a8bf7 433 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 429 3.8E-141 T 22-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 SMGD1_RS08975 24cad5b05d95c596839f17a5448a8bf7 433 PANTHER PTHR11918:SF43 1 433 3.7E-135 T 22-04-2016 SMGD1_RS08975 24cad5b05d95c596839f17a5448a8bf7 433 Gene3D G3DSA:3.80.30.20 139 372 1.6E-71 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe SMGD1_RS08975 24cad5b05d95c596839f17a5448a8bf7 433 Pfam PF04055 Radical SAM superfamily 144 317 1.5E-27 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SMGD1_RS08975 24cad5b05d95c596839f17a5448a8bf7 433 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 144 164 - T 22-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 SMGD1_RS08975 24cad5b05d95c596839f17a5448a8bf7 433 Pfam PF00919 Uncharacterized protein family UPF0004 4 102 7.7E-28 T 22-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 SMGD1_RS08975 24cad5b05d95c596839f17a5448a8bf7 433 PANTHER PTHR11918 1 433 3.7E-135 T 22-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein SMGD1_RS08975 24cad5b05d95c596839f17a5448a8bf7 433 SUPERFAMILY SSF102114 124 365 1.57E-54 T 22-04-2016 SMGD1_RS08975 24cad5b05d95c596839f17a5448a8bf7 433 Pfam PF01938 TRAM domain 375 432 5.4E-6 T 22-04-2016 IPR002792 TRAM domain SMGD1_RS10280 bc3d73e040ea3c08c05a45144c7a1630 107 SUPERFAMILY SSF52490 16 98 1.57E-20 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 SMGD1_RS10280 bc3d73e040ea3c08c05a45144c7a1630 107 PANTHER PTHR30314 16 97 7.2E-33 T 22-04-2016 SMGD1_RS10280 bc3d73e040ea3c08c05a45144c7a1630 107 SMART SM00864 16 107 3.8E-5 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 SMGD1_RS10280 bc3d73e040ea3c08c05a45144c7a1630 107 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 16 99 8.3E-14 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 SMGD1_RS10280 bc3d73e040ea3c08c05a45144c7a1630 107 Gene3D G3DSA:3.40.50.1440 15 98 2.5E-27 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 SMGD1_RS03225 c9601bdde5b36af16d34c814ae3b5545 203 Pfam PF03458 UPF0126 domain 95 167 2.0E-20 T 22-04-2016 IPR005115 Uncharacterised domain UPF0126 SMGD1_RS03225 c9601bdde5b36af16d34c814ae3b5545 203 Pfam PF03458 UPF0126 domain 7 79 3.1E-16 T 22-04-2016 IPR005115 Uncharacterised domain UPF0126 SMGD1_RS03225 c9601bdde5b36af16d34c814ae3b5545 203 PANTHER PTHR30506 1 202 6.1E-47 T 22-04-2016 SMGD1_RS00525 072db28f0fb11f12de9a895c57cc0bd8 68 Gene3D G3DSA:1.20.58.340 1 49 1.9E-4 T 22-04-2016 SMGD1_RS00525 072db28f0fb11f12de9a895c57cc0bd8 68 SUPERFAMILY SSF144083 1 46 2.88E-5 T 22-04-2016 SMGD1_RS05575 a5bdc666f3d99dd8af627365ea770bc1 640 PANTHER PTHR10799 514 637 2.1E-24 T 22-04-2016 SMGD1_RS05575 a5bdc666f3d99dd8af627365ea770bc1 640 PANTHER PTHR10799 278 423 2.1E-24 T 22-04-2016 SMGD1_RS05575 a5bdc666f3d99dd8af627365ea770bc1 640 Pfam PF00990 Diguanylate cyclase, GGDEF domain 483 634 2.2E-40 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS05575 a5bdc666f3d99dd8af627365ea770bc1 640 Gene3D G3DSA:3.30.70.270 483 637 3.4E-45 T 22-04-2016 SMGD1_RS05575 a5bdc666f3d99dd8af627365ea770bc1 640 SMART SM00267 470 638 6.8E-50 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS05575 a5bdc666f3d99dd8af627365ea770bc1 640 PANTHER PTHR10799:SF750 514 637 2.1E-24 T 22-04-2016 SMGD1_RS05575 a5bdc666f3d99dd8af627365ea770bc1 640 PANTHER PTHR10799:SF750 278 423 2.1E-24 T 22-04-2016 SMGD1_RS05575 a5bdc666f3d99dd8af627365ea770bc1 640 SUPERFAMILY SSF55073 486 637 3.61E-42 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS05575 a5bdc666f3d99dd8af627365ea770bc1 640 Pfam PF14827 Double sensory domain of two-component sensor kinase 105 304 2.0E-14 T 22-04-2016 IPR029150 Double Cache domain 3 SMGD1_RS05575 a5bdc666f3d99dd8af627365ea770bc1 640 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 477 636 1.4E-45 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS02090 354be688de20e6c49c6c7523a5a83c57 336 SUPERFAMILY SSF56219 20 199 3.27E-36 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SMGD1_RS02090 354be688de20e6c49c6c7523a5a83c57 336 SUPERFAMILY SSF56219 230 331 3.27E-36 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SMGD1_RS02090 354be688de20e6c49c6c7523a5a83c57 336 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 23 280 9.3E-14 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SMGD1_RS02090 354be688de20e6c49c6c7523a5a83c57 336 Gene3D G3DSA:3.60.10.10 19 331 1.3E-20 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SMGD1_RS10880 f8fcc97f77e217802b79e7580e4e271b 225 SUPERFAMILY SSF64182 28 193 4.01E-15 T 22-04-2016 SMGD1_RS10880 f8fcc97f77e217802b79e7580e4e271b 225 Gene3D G3DSA:3.90.1640.10 84 145 4.4E-7 T 22-04-2016 SMGD1_RS01035 e23a28981ca587ece7047edd45361965 241 SUPERFAMILY SSF54060 18 241 1.41E-66 T 22-04-2016 SMGD1_RS01035 e23a28981ca587ece7047edd45361965 241 Pfam PF04231 Endonuclease I 29 241 8.7E-33 T 22-04-2016 IPR007346 Endonuclease I GO:0004518 SMGD1_RS01035 e23a28981ca587ece7047edd45361965 241 PANTHER PTHR33607 1 241 9.6E-23 T 22-04-2016 SMGD1_RS10775 e1245fdb2047515a151c2a6285224a06 342 Pfam PF02169 LPP20 lipoprotein 43 141 7.0E-11 T 22-04-2016 IPR024952 Lipoprotein LPP20-like SMGD1_RS08290 8480df5547ed32469fb9076cb4f70dba 133 SUPERFAMILY SSF50331 1 125 3.65E-14 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal SMGD1_RS08290 8480df5547ed32469fb9076cb4f70dba 133 Gene3D G3DSA:2.40.50.100 64 127 2.5E-13 T 22-04-2016 SMGD1_RS04935 a6ed4f09af159cb308be73213b6a1382 199 Pfam PF00573 Ribosomal protein L4/L1 family 25 193 2.9E-49 T 22-04-2016 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 SMGD1_RS04935 a6ed4f09af159cb308be73213b6a1382 199 SUPERFAMILY SSF52166 2 193 1.1E-54 T 22-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 SMGD1_RS04935 a6ed4f09af159cb308be73213b6a1382 199 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 26 193 2.9E-57 T 22-04-2016 IPR013005 50S ribosomal protein uL4 SMGD1_RS04935 a6ed4f09af159cb308be73213b6a1382 199 Gene3D G3DSA:3.40.1370.10 56 193 6.3E-43 T 22-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 SMGD1_RS04935 a6ed4f09af159cb308be73213b6a1382 199 PANTHER PTHR10746 1 194 6.5E-47 T 22-04-2016 IPR013005 50S ribosomal protein uL4 SMGD1_RS07575 2dd16d7c3c3bc727bc56057b249ce60a 69 Pfam PF13179 Family of unknown function (DUF4006) 1 64 7.3E-28 T 22-04-2016 IPR025065 Protein of unknown function DUF4006 SMGD1_RS04980 9d123e4c7a5fb6ed073b877c7cb3c715 73 SUPERFAMILY SSF54285 1 73 4.09E-12 T 22-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp SMGD1_RS04980 9d123e4c7a5fb6ed073b877c7cb3c715 73 Gene3D G3DSA:3.10.20.30 11 73 2.7E-10 T 22-04-2016 IPR012675 Beta-grasp domain SMGD1_RS04980 9d123e4c7a5fb6ed073b877c7cb3c715 73 Pfam PF02597 ThiS family 5 73 2.7E-12 T 22-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 SMGD1_RS06475 513dc524b06f9a1b4bc9e0f6f9cc6cc6 96 PANTHER PTHR30353 1 95 1.5E-18 T 22-04-2016 IPR032818 DedA family SMGD1_RS06475 513dc524b06f9a1b4bc9e0f6f9cc6cc6 96 PANTHER PTHR30353:SF12 1 95 1.5E-18 T 22-04-2016 SMGD1_RS06475 513dc524b06f9a1b4bc9e0f6f9cc6cc6 96 Pfam PF09335 SNARE associated Golgi protein 1 81 1.7E-8 T 22-04-2016 IPR032816 SNARE associated Golgi protein SMGD1_RS08930 e9ecb057832cb806d10cae0fb86daed5 180 Pfam PF01467 Cytidylyltransferase-like 6 155 1.3E-22 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 SMGD1_RS08930 e9ecb057832cb806d10cae0fb86daed5 180 PANTHER PTHR39321 1 135 2.8E-25 T 22-04-2016 SMGD1_RS08930 e9ecb057832cb806d10cae0fb86daed5 180 SUPERFAMILY SSF52374 2 158 1.13E-35 T 22-04-2016 SMGD1_RS08930 e9ecb057832cb806d10cae0fb86daed5 180 Gene3D G3DSA:3.40.50.620 2 176 3.0E-44 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMGD1_RS08930 e9ecb057832cb806d10cae0fb86daed5 180 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 6 176 4.6E-37 T 22-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 SMGD1_RS08930 e9ecb057832cb806d10cae0fb86daed5 180 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 2 177 22.639 T 22-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 SMGD1_RS01980 cf3ee8e5dd0976c16e5f355638ecdefc 522 PANTHER PTHR11938:SF85 22 460 8.6E-35 T 22-04-2016 SMGD1_RS01980 cf3ee8e5dd0976c16e5f355638ecdefc 522 Gene3D G3DSA:3.30.70.20 142 201 1.4E-14 T 22-04-2016 SMGD1_RS01980 cf3ee8e5dd0976c16e5f355638ecdefc 522 SUPERFAMILY SSF54862 33 178 9.42E-52 T 22-04-2016 SMGD1_RS01980 cf3ee8e5dd0976c16e5f355638ecdefc 522 Gene3D G3DSA:3.30.70.20 33 92 8.0E-13 T 22-04-2016 SMGD1_RS01980 cf3ee8e5dd0976c16e5f355638ecdefc 522 Pfam PF04976 DMSO reductase anchor subunit (DmsC) 232 505 1.5E-22 T 22-04-2016 IPR007059 DMSO reductase anchor subunit (DmsC) GO:0016021|GO:0019645 SMGD1_RS01980 cf3ee8e5dd0976c16e5f355638ecdefc 522 Pfam PF13247 4Fe-4S dicluster domain 83 175 1.3E-24 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SMGD1_RS01980 cf3ee8e5dd0976c16e5f355638ecdefc 522 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 122 133 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SMGD1_RS01980 cf3ee8e5dd0976c16e5f355638ecdefc 522 Gene3D G3DSA:3.30.70.20 93 141 1.2E-20 T 22-04-2016 SMGD1_RS01980 cf3ee8e5dd0976c16e5f355638ecdefc 522 PANTHER PTHR11938 22 460 8.6E-35 T 22-04-2016 SMGD1_RS05075 51641090ce510e3ca1ebbeebe65fc9ee 167 PANTHER PTHR34309 1 158 5.5E-17 T 22-04-2016 SMGD1_RS05075 51641090ce510e3ca1ebbeebe65fc9ee 167 SUPERFAMILY SSF143744 22 153 9.55E-26 T 22-04-2016 SMGD1_RS05075 51641090ce510e3ca1ebbeebe65fc9ee 167 Pfam PF03928 Haem-degrading 32 151 1.1E-17 T 22-04-2016 IPR005624 Haem-degrading SMGD1_RS05075 51641090ce510e3ca1ebbeebe65fc9ee 167 PANTHER PTHR34309:SF1 1 158 5.5E-17 T 22-04-2016 SMGD1_RS02415 caa582d275c40d7b7de7f186798cb993 241 PANTHER PTHR22916 4 236 1.6E-53 T 22-04-2016 SMGD1_RS02415 caa582d275c40d7b7de7f186798cb993 241 PANTHER PTHR22916:SF4 4 236 1.6E-53 T 22-04-2016 SMGD1_RS02415 caa582d275c40d7b7de7f186798cb993 241 Pfam PF00535 Glycosyl transferase family 2 6 118 1.4E-26 T 22-04-2016 IPR001173 Glycosyltransferase 2-like SMGD1_RS02415 caa582d275c40d7b7de7f186798cb993 241 Gene3D G3DSA:3.90.550.10 2 175 1.2E-34 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMGD1_RS02415 caa582d275c40d7b7de7f186798cb993 241 SUPERFAMILY SSF53448 4 196 8.09E-43 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMGD1_RS00680 ced7aa3f41db4a771fdd4a9ecd960d18 277 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 3 273 1.9E-95 T 22-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 SMGD1_RS00680 ced7aa3f41db4a771fdd4a9ecd960d18 277 Pfam PF02401 LytB protein 3 271 9.0E-84 T 22-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 SMGD1_RS00680 ced7aa3f41db4a771fdd4a9ecd960d18 277 PANTHER PTHR30426 1 276 1.9E-100 T 22-04-2016 SMGD1_RS00680 ced7aa3f41db4a771fdd4a9ecd960d18 277 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 275 31.096 T 22-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 SMGD1_RS02480 6a99a45596354fe9c67aa491eab369ce 205 SUPERFAMILY SSF53335 23 195 2.58E-18 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS02480 6a99a45596354fe9c67aa491eab369ce 205 Pfam PF08241 Methyltransferase domain 19 96 1.9E-7 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 SMGD1_RS02480 6a99a45596354fe9c67aa491eab369ce 205 Gene3D G3DSA:3.40.50.150 156 203 7.0E-21 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS02480 6a99a45596354fe9c67aa491eab369ce 205 Gene3D G3DSA:3.40.50.150 20 121 7.0E-21 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS04125 6d58fe2ee1f61949fde9a0599334ba45 301 Pfam PF00892 EamA-like transporter family 15 144 1.8E-19 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SMGD1_RS04125 6d58fe2ee1f61949fde9a0599334ba45 301 PANTHER PTHR22911:SF6 14 301 2.8E-55 T 22-04-2016 SMGD1_RS04125 6d58fe2ee1f61949fde9a0599334ba45 301 SUPERFAMILY SSF103481 212 300 1.31E-9 T 22-04-2016 SMGD1_RS04125 6d58fe2ee1f61949fde9a0599334ba45 301 PANTHER PTHR22911 14 301 2.8E-55 T 22-04-2016 SMGD1_RS04125 6d58fe2ee1f61949fde9a0599334ba45 301 SUPERFAMILY SSF103481 50 148 3.73E-16 T 22-04-2016 SMGD1_RS05295 d26e0cc2542486fc84b7481706386849 280 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 6.0E-38 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SMGD1_RS05295 d26e0cc2542486fc84b7481706386849 280 PRINTS PR00207 Flagellin signature 76 95 7.7E-20 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 SMGD1_RS05295 d26e0cc2542486fc84b7481706386849 280 PRINTS PR00207 Flagellin signature 111 134 7.7E-20 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 SMGD1_RS05295 d26e0cc2542486fc84b7481706386849 280 PRINTS PR00207 Flagellin signature 37 54 7.7E-20 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 SMGD1_RS05295 d26e0cc2542486fc84b7481706386849 280 PANTHER PTHR30244:SF1 3 280 2.2E-83 T 22-04-2016 SMGD1_RS05295 d26e0cc2542486fc84b7481706386849 280 PANTHER PTHR30244 3 280 2.2E-83 T 22-04-2016 SMGD1_RS05295 d26e0cc2542486fc84b7481706386849 280 Pfam PF00700 Bacterial flagellin C-terminal helical region 196 279 9.5E-26 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SMGD1_RS05295 d26e0cc2542486fc84b7481706386849 280 Gene3D G3DSA:1.20.1330.10 55 236 7.8E-47 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SMGD1_RS05295 d26e0cc2542486fc84b7481706386849 280 SUPERFAMILY SSF64518 1 280 2.48E-73 T 22-04-2016 SMGD1_RS02955 3d9d1524ebf380ec69f919e2ae61c512 199 SUPERFAMILY SSF159594 27 197 6.54E-24 T 22-04-2016 SMGD1_RS02955 3d9d1524ebf380ec69f919e2ae61c512 199 Gene3D G3DSA:3.40.50.10610 14 198 3.6E-30 T 22-04-2016 IPR005586 ABC-type transport auxiliary lipoprotein component SMGD1_RS02955 3d9d1524ebf380ec69f919e2ae61c512 199 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 35 189 1.3E-11 T 22-04-2016 IPR005586 ABC-type transport auxiliary lipoprotein component SMGD1_RS10545 cd7992a698103a7f5c5b3083ae7c95da 600 Pfam PF01966 HD domain 412 546 9.0E-16 T 22-04-2016 IPR006674 HD domain SMGD1_RS10545 cd7992a698103a7f5c5b3083ae7c95da 600 Gene3D G3DSA:1.10.3210.10 411 585 8.0E-16 T 22-04-2016 IPR006674 HD domain SMGD1_RS10545 cd7992a698103a7f5c5b3083ae7c95da 600 SUPERFAMILY SSF109604 398 585 1.16E-31 T 22-04-2016 SMGD1_RS10545 cd7992a698103a7f5c5b3083ae7c95da 600 SMART SM01080 5 317 4.1E-26 T 22-04-2016 IPR007890 CHASE2 SMGD1_RS10545 cd7992a698103a7f5c5b3083ae7c95da 600 Pfam PF05226 CHASE2 domain 12 318 4.9E-44 T 22-04-2016 IPR007890 CHASE2 SMGD1_RS10545 cd7992a698103a7f5c5b3083ae7c95da 600 SMART SM00471 406 556 4.4E-8 T 22-04-2016 IPR003607 HD/PDEase domain SMGD1_RS02010 53b129d2c40dd71abccb303994b2b09a 340 PANTHER PTHR34216:SF1 14 338 2.3E-43 T 22-04-2016 SMGD1_RS02010 53b129d2c40dd71abccb303994b2b09a 340 Gene3D G3DSA:3.20.20.370 51 212 2.7E-29 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 SMGD1_RS02010 53b129d2c40dd71abccb303994b2b09a 340 Pfam PF01522 Polysaccharide deacetylase 74 210 2.6E-24 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 SMGD1_RS02010 53b129d2c40dd71abccb303994b2b09a 340 SUPERFAMILY SSF88713 36 216 2.05E-34 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 SMGD1_RS02010 53b129d2c40dd71abccb303994b2b09a 340 PANTHER PTHR34216 14 338 2.3E-43 T 22-04-2016 SMGD1_RS14390 2816369dd557fe02e437ae816d158158 455 SUPERFAMILY SSF158791 18 134 3.79E-18 T 22-04-2016 SMGD1_RS14390 2816369dd557fe02e437ae816d158158 455 TIGRFAM TIGR00400 mgtE: magnesium transporter 4 454 2.9E-74 T 22-04-2016 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 SMGD1_RS14390 2816369dd557fe02e437ae816d158158 455 PANTHER PTHR41394:SF1 218 442 4.1E-45 T 22-04-2016 SMGD1_RS14390 2816369dd557fe02e437ae816d158158 455 Pfam PF03448 MgtE intracellular N domain 30 134 2.7E-15 T 22-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain SMGD1_RS14390 2816369dd557fe02e437ae816d158158 455 PANTHER PTHR41394 218 442 4.1E-45 T 22-04-2016 SMGD1_RS14390 2816369dd557fe02e437ae816d158158 455 SUPERFAMILY SSF54631 138 277 3.8E-17 T 22-04-2016 SMGD1_RS14390 2816369dd557fe02e437ae816d158158 455 Pfam PF01769 Divalent cation transporter 326 447 3.2E-27 T 22-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 SMGD1_RS14390 2816369dd557fe02e437ae816d158158 455 Pfam PF00571 CBS domain 216 260 1.5E-4 T 22-04-2016 IPR000644 CBS domain SMGD1_RS14390 2816369dd557fe02e437ae816d158158 455 SMART SM00924 29 138 1.4E-14 T 22-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain SMGD1_RS14390 2816369dd557fe02e437ae816d158158 455 Gene3D G3DSA:3.10.580.10 138 262 1.5E-12 T 22-04-2016 SMGD1_RS14390 2816369dd557fe02e437ae816d158158 455 SUPERFAMILY SSF161093 283 454 9.15E-49 T 22-04-2016 SMGD1_RS14390 2816369dd557fe02e437ae816d158158 455 Gene3D G3DSA:1.25.60.10 13 133 5.0E-15 T 22-04-2016 SMGD1_RS14390 2816369dd557fe02e437ae816d158158 455 Gene3D G3DSA:1.10.357.20 284 454 1.0E-51 T 22-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 SMGD1_RS09320 d80d9b551151d78c09b9a966916207eb 196 Pfam PF00436 Single-strand binding protein family 2 104 9.5E-32 T 22-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 SMGD1_RS09320 d80d9b551151d78c09b9a966916207eb 196 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 1 196 4.5E-47 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 SMGD1_RS09320 d80d9b551151d78c09b9a966916207eb 196 Gene3D G3DSA:2.40.50.140 186 196 2.9E-37 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMGD1_RS09320 d80d9b551151d78c09b9a966916207eb 196 Gene3D G3DSA:2.40.50.140 1 137 2.9E-37 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMGD1_RS09320 d80d9b551151d78c09b9a966916207eb 196 SUPERFAMILY SSF50249 1 155 8.23E-43 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMGD1_RS09320 d80d9b551151d78c09b9a966916207eb 196 PANTHER PTHR10302 1 161 1.6E-34 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 SMGD1_RS09320 d80d9b551151d78c09b9a966916207eb 196 PANTHER PTHR10302 188 196 1.6E-34 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 SMGD1_RS09320 d80d9b551151d78c09b9a966916207eb 196 Hamap MF_00984 Single-stranded DNA-binding protein. 2 108 30.076 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 SMGD1_RS06710 53c50e81438091af5e08d5800d2fe6ba 321 Gene3D G3DSA:1.10.3470.10 5 320 4.7E-81 T 22-04-2016 IPR029022 ABC transporter, BtuC-like SMGD1_RS06710 53c50e81438091af5e08d5800d2fe6ba 321 PANTHER PTHR30472 4 321 6.1E-79 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 SMGD1_RS06710 53c50e81438091af5e08d5800d2fe6ba 321 Pfam PF01032 FecCD transport family 9 316 2.0E-77 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 SMGD1_RS06710 53c50e81438091af5e08d5800d2fe6ba 321 SUPERFAMILY SSF81345 4 316 2.35E-66 T 22-04-2016 IPR029022 ABC transporter, BtuC-like SMGD1_RS09525 356c5ff289cb1e554550ab007fcdd9a9 131 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 5 126 9.3E-21 T 22-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 SMGD1_RS09525 356c5ff289cb1e554550ab007fcdd9a9 131 Gene3D G3DSA:3.30.420.140 3 127 1.9E-30 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 SMGD1_RS09525 356c5ff289cb1e554550ab007fcdd9a9 131 PANTHER PTHR33317 4 126 1.8E-21 T 22-04-2016 SMGD1_RS09525 356c5ff289cb1e554550ab007fcdd9a9 131 SMART SM00732 1 97 3.1E-18 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 SMGD1_RS09525 356c5ff289cb1e554550ab007fcdd9a9 131 SUPERFAMILY SSF53098 3 128 7.89E-25 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMGD1_RS09525 356c5ff289cb1e554550ab007fcdd9a9 131 Pfam PF03652 Holliday junction resolvase 3 127 3.7E-28 T 22-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 SMGD1_RS09525 356c5ff289cb1e554550ab007fcdd9a9 131 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 1 130 17.685 T 22-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 SMGD1_RS11355 0dd3b748dab422a1c6caaf6f76e2fc50 302 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 1 298 1.2E-76 T 22-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SMGD1_RS11355 0dd3b748dab422a1c6caaf6f76e2fc50 302 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 1 296 31.424 T 22-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SMGD1_RS11355 0dd3b748dab422a1c6caaf6f76e2fc50 302 SUPERFAMILY SSF53328 1 203 2.35E-61 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SMGD1_RS11355 0dd3b748dab422a1c6caaf6f76e2fc50 302 SUPERFAMILY SSF50486 201 298 1.02E-19 T 22-04-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 SMGD1_RS11355 0dd3b748dab422a1c6caaf6f76e2fc50 302 Gene3D G3DSA:3.40.50.170 1 201 1.0E-63 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SMGD1_RS11355 0dd3b748dab422a1c6caaf6f76e2fc50 302 Pfam PF02911 Formyl transferase, C-terminal domain 200 293 2.6E-19 T 22-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SMGD1_RS11355 0dd3b748dab422a1c6caaf6f76e2fc50 302 Pfam PF00551 Formyl transferase 1 176 6.9E-42 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SMGD1_RS11355 0dd3b748dab422a1c6caaf6f76e2fc50 302 PANTHER PTHR11138 1 295 3.0E-84 T 22-04-2016 SMGD1_RS11355 0dd3b748dab422a1c6caaf6f76e2fc50 302 Gene3D G3DSA:3.10.25.10 203 298 7.5E-18 T 22-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SMGD1_RS08330 2f06847e709913951808069e6a2b2c90 168 Gene3D G3DSA:3.30.310.70 32 158 3.6E-19 T 22-04-2016 IPR005180 Domain of unknown function DUF302 SMGD1_RS08330 2f06847e709913951808069e6a2b2c90 168 SUPERFAMILY SSF103247 32 158 1.1E-18 T 22-04-2016 IPR005180 Domain of unknown function DUF302 SMGD1_RS08330 2f06847e709913951808069e6a2b2c90 168 Pfam PF03625 Domain of unknown function DUF302 66 128 4.7E-12 T 22-04-2016 IPR005180 Domain of unknown function DUF302 SMGD1_RS10770 26a36cc967f1e63a8939ae99dcd42cfe 337 SUPERFAMILY SSF48452 243 302 9.93E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS10770 26a36cc967f1e63a8939ae99dcd42cfe 337 Gene3D G3DSA:1.25.40.10 249 301 9.4E-4 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS10770 26a36cc967f1e63a8939ae99dcd42cfe 337 Pfam PF03783 Curli production assembly/transport component CsgG 67 186 4.3E-13 T 22-04-2016 IPR005534 Curli production assembly/transport component CsgG GO:0030288 SMGD1_RS02625 1e292b449259769b960d040939bf3e7c 695 Pfam PF02516 Oligosaccharyl transferase STT3 subunit 38 468 3.8E-39 T 22-04-2016 IPR003674 Oligosaccharyl transferase, STT3 subunit GO:0004576|GO:0006486|GO:0016020 UniPathway: UPA00378 SMGD1_RS08360 f5544ac9f8f914074527290d67768f29 316 PANTHER PTHR34704:SF1 152 303 9.0E-17 T 22-04-2016 SMGD1_RS08360 f5544ac9f8f914074527290d67768f29 316 Pfam PF03008 Archaea bacterial proteins of unknown function 157 245 1.7E-19 T 22-04-2016 IPR004256 Domain of unknown function DUF234, DEXX-box ATPase C-terminal SMGD1_RS08360 f5544ac9f8f914074527290d67768f29 316 Gene3D G3DSA:3.40.1350.10 219 302 1.9E-11 T 22-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 SMGD1_RS08360 f5544ac9f8f914074527290d67768f29 316 SUPERFAMILY SSF52980 214 282 1.47E-7 T 22-04-2016 IPR011335 Restriction endonuclease type II-like SMGD1_RS08360 f5544ac9f8f914074527290d67768f29 316 PANTHER PTHR34704 152 303 9.0E-17 T 22-04-2016 SMGD1_RS07420 7b21fa5fb74d9528875c6a1eeffcd67d 399 Pfam PF02661 Fic/DOC family 141 221 5.2E-16 T 22-04-2016 IPR003812 Fido domain SMGD1_RS07420 7b21fa5fb74d9528875c6a1eeffcd67d 399 SUPERFAMILY SSF140931 111 295 3.27E-25 T 22-04-2016 IPR003812 Fido domain SMGD1_RS07420 7b21fa5fb74d9528875c6a1eeffcd67d 399 PANTHER PTHR13504 41 399 5.2E-14 T 22-04-2016 SMGD1_RS07420 7b21fa5fb74d9528875c6a1eeffcd67d 399 Gene3D G3DSA:1.10.3290.10 19 298 2.1E-41 T 22-04-2016 IPR003812 Fido domain SMGD1_RS07420 7b21fa5fb74d9528875c6a1eeffcd67d 399 Gene3D G3DSA:1.10.10.10 329 379 5.9E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMGD1_RS03645 df38b0787accf81aa4b189f95bc50ec8 141 PIRSF PIRSF009554 1 139 2.9E-42 T 22-04-2016 IPR011194 Uncharacterised protein family UPF0306 SMGD1_RS03645 df38b0787accf81aa4b189f95bc50ec8 141 SUPERFAMILY SSF50475 1 132 1.35E-17 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 SMGD1_RS03645 df38b0787accf81aa4b189f95bc50ec8 141 Gene3D G3DSA:2.30.110.10 3 125 1.4E-10 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 SMGD1_RS03645 df38b0787accf81aa4b189f95bc50ec8 141 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 6 93 7.4E-8 T 22-04-2016 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 SMGD1_RS01605 c22fe9f5a66fcdae247f23792bd7b0e0 265 Gene3D G3DSA:3.60.110.10 1 256 2.1E-41 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 SMGD1_RS01605 c22fe9f5a66fcdae247f23792bd7b0e0 265 PANTHER PTHR23088 17 265 4.3E-20 T 22-04-2016 SMGD1_RS01605 c22fe9f5a66fcdae247f23792bd7b0e0 265 Pfam PF00795 Carbon-nitrogen hydrolase 17 251 2.6E-13 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 SMGD1_RS01605 c22fe9f5a66fcdae247f23792bd7b0e0 265 SUPERFAMILY SSF56317 1 255 1.57E-37 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 SMGD1_RS02510 7a458bfd052e5340c267fb66d9a88a71 294 Pfam PF00535 Glycosyl transferase family 2 18 152 8.0E-28 T 22-04-2016 IPR001173 Glycosyltransferase 2-like SMGD1_RS02510 7a458bfd052e5340c267fb66d9a88a71 294 SUPERFAMILY SSF53448 15 236 6.19E-37 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMGD1_RS02510 7a458bfd052e5340c267fb66d9a88a71 294 Gene3D G3DSA:3.90.550.10 15 243 1.1E-36 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMGD1_RS02510 7a458bfd052e5340c267fb66d9a88a71 294 PANTHER PTHR22916:SF33 4 293 2.8E-44 T 22-04-2016 SMGD1_RS02510 7a458bfd052e5340c267fb66d9a88a71 294 PANTHER PTHR22916 4 293 2.8E-44 T 22-04-2016 SMGD1_RS12005 04a583e2a850e969146b12472ac7c8c6 206 Pfam PF02674 Colicin V production protein 6 152 9.6E-23 T 22-04-2016 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 SMGD1_RS10830 6da2214b30420e82527d297c54178801 743 Pfam PF01103 Surface antigen 441 743 1.2E-52 T 22-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 SMGD1_RS10830 6da2214b30420e82527d297c54178801 743 PIRSF PIRSF006076 1 743 4.0E-188 T 22-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 SMGD1_RS10830 6da2214b30420e82527d297c54178801 743 PANTHER PTHR12815:SF11 1 743 2.3E-115 T 22-04-2016 SMGD1_RS10830 6da2214b30420e82527d297c54178801 743 Pfam PF07244 Surface antigen variable number repeat 342 413 1.4E-10 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 SMGD1_RS10830 6da2214b30420e82527d297c54178801 743 Pfam PF07244 Surface antigen variable number repeat 88 164 6.0E-9 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 SMGD1_RS10830 6da2214b30420e82527d297c54178801 743 Pfam PF07244 Surface antigen variable number repeat 260 339 3.8E-10 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 SMGD1_RS10830 6da2214b30420e82527d297c54178801 743 Pfam PF07244 Surface antigen variable number repeat 20 86 5.8E-7 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 SMGD1_RS10830 6da2214b30420e82527d297c54178801 743 Gene3D G3DSA:2.40.160.50 424 743 3.2E-22 T 22-04-2016 SMGD1_RS10830 6da2214b30420e82527d297c54178801 743 PANTHER PTHR12815 1 743 2.3E-115 T 22-04-2016 SMGD1_RS10830 6da2214b30420e82527d297c54178801 743 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 20 743 2.9E-192 T 22-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 SMGD1_RS05730 a565c4aa40dee6756f7cb5299d84e7e3 198 PANTHER PTHR12907 1 193 1.6E-43 T 22-04-2016 SMGD1_RS05730 a565c4aa40dee6756f7cb5299d84e7e3 198 SMART SM00702 16 193 5.3E-20 T 22-04-2016 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 SMGD1_RS05730 a565c4aa40dee6756f7cb5299d84e7e3 198 PANTHER PTHR12907:SF14 1 193 1.6E-43 T 22-04-2016 SMGD1_RS05730 a565c4aa40dee6756f7cb5299d84e7e3 198 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 103 193 5.5E-22 T 22-04-2016 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 SMGD1_RS09680 d9c99a38cba76f17d3c44325f7c34f7e 265 SUPERFAMILY SSF161098 58 244 6.1E-12 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMGD1_RS09680 d9c99a38cba76f17d3c44325f7c34f7e 265 PANTHER PTHR30465 1 264 2.9E-71 T 22-04-2016 SMGD1_RS09680 d9c99a38cba76f17d3c44325f7c34f7e 265 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 256 5.8E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMGD1_RS09680 d9c99a38cba76f17d3c44325f7c34f7e 265 Gene3D G3DSA:1.10.3720.10 56 257 4.6E-13 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMGD1_RS09680 d9c99a38cba76f17d3c44325f7c34f7e 265 PANTHER PTHR30465:SF2 1 264 2.9E-71 T 22-04-2016 SMGD1_RS11380 35a456a21bbf3d59fdfb157573eb728b 171 Pfam PF00430 ATP synthase B/B' CF(0) 29 147 1.1E-11 T 22-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 SMGD1_RS11380 35a456a21bbf3d59fdfb157573eb728b 171 Hamap MF_01398 ATP synthase subunit b [atpF]. 9 170 8.685 T 22-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 SMGD1_RS03400 ce12bff6851bd79ff01a4a19f0993ceb 236 SUPERFAMILY SSF47413 2 67 4.02E-14 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SMGD1_RS03400 ce12bff6851bd79ff01a4a19f0993ceb 236 SMART SM00530 5 60 1.2E-9 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SMGD1_RS03400 ce12bff6851bd79ff01a4a19f0993ceb 236 Gene3D G3DSA:1.10.260.40 5 66 6.1E-18 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SMGD1_RS03400 ce12bff6851bd79ff01a4a19f0993ceb 236 Pfam PF01381 Helix-turn-helix 6 60 1.8E-10 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SMGD1_RS09335 7bc9bf2c7d66d6967838b9066ba2e2f2 259 Pfam PF02481 DNA recombination-mediator protein A 11 194 3.4E-53 T 22-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 SMGD1_RS09335 7bc9bf2c7d66d6967838b9066ba2e2f2 259 Gene3D G3DSA:3.40.50.450 32 173 8.3E-10 T 22-04-2016 SMGD1_RS09335 7bc9bf2c7d66d6967838b9066ba2e2f2 259 PANTHER PTHR32039:SF8 11 210 2.0E-35 T 22-04-2016 SMGD1_RS09335 7bc9bf2c7d66d6967838b9066ba2e2f2 259 SUPERFAMILY SSF102405 13 173 1.57E-24 T 22-04-2016 SMGD1_RS09335 7bc9bf2c7d66d6967838b9066ba2e2f2 259 PANTHER PTHR32039 11 210 2.0E-35 T 22-04-2016 SMGD1_RS08450 a320fa7227eec120805a2895da28b259 191 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 19 161 1.1E-28 T 22-04-2016 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 SMGD1_RS08450 a320fa7227eec120805a2895da28b259 191 PANTHER PTHR33269:SF1 1 167 7.0E-28 T 22-04-2016 SMGD1_RS08450 a320fa7227eec120805a2895da28b259 191 PANTHER PTHR33269 1 167 7.0E-28 T 22-04-2016 SMGD1_RS05305 9bc0fcca701586cb5c32ff5e7509cd6d 173 SUPERFAMILY SSF56300 1 156 1.9E-33 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SMGD1_RS05305 9bc0fcca701586cb5c32ff5e7509cd6d 173 Gene3D G3DSA:3.60.21.10 1 146 3.4E-36 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SMGD1_RS05305 9bc0fcca701586cb5c32ff5e7509cd6d 173 PANTHER PTHR11124 1 126 9.4E-22 T 22-04-2016 IPR000979 Phosphodiesterase MJ0936/Vps29 SMGD1_RS05305 9bc0fcca701586cb5c32ff5e7509cd6d 173 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 1 144 1.7E-25 T 22-04-2016 IPR000979 Phosphodiesterase MJ0936/Vps29 SMGD1_RS05305 9bc0fcca701586cb5c32ff5e7509cd6d 173 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 1 144 3.2E-22 T 22-04-2016 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type SMGD1_RS00630 ffdf817ce481ce7cff0e211e0bb03411 326 SUPERFAMILY SSF53383 69 319 1.16E-11 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SMGD1_RS00630 ffdf817ce481ce7cff0e211e0bb03411 326 Gene3D G3DSA:3.90.1150.10 209 315 1.7E-13 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SMGD1_RS04325 8e1b79887f9793d09600404914e6c564 248 Pfam PF00990 Diguanylate cyclase, GGDEF domain 95 246 3.7E-30 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS04325 8e1b79887f9793d09600404914e6c564 248 Gene3D G3DSA:3.30.70.270 96 246 3.0E-34 T 22-04-2016 SMGD1_RS04325 8e1b79887f9793d09600404914e6c564 248 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 95 246 9.5E-33 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS04325 8e1b79887f9793d09600404914e6c564 248 SUPERFAMILY SSF55073 99 245 8.63E-30 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS04325 8e1b79887f9793d09600404914e6c564 248 SMART SM00267 83 247 3.6E-20 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS12430 5393696a747abc0bce0aabc5560d614e 140 SUPERFAMILY SSF55021 71 134 1.92E-8 T 22-04-2016 SMGD1_RS12430 5393696a747abc0bce0aabc5560d614e 140 PANTHER PTHR40099:SF1 1 139 1.1E-32 T 22-04-2016 SMGD1_RS12430 5393696a747abc0bce0aabc5560d614e 140 PANTHER PTHR40099 1 139 1.1E-32 T 22-04-2016 SMGD1_RS12430 5393696a747abc0bce0aabc5560d614e 140 Pfam PF01842 ACT domain 7 62 9.5E-7 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 SMGD1_RS12430 5393696a747abc0bce0aabc5560d614e 140 Gene3D G3DSA:3.30.70.260 75 131 1.2E-5 T 22-04-2016 SMGD1_RS12430 5393696a747abc0bce0aabc5560d614e 140 Gene3D G3DSA:3.30.70.260 5 58 3.4E-10 T 22-04-2016 SMGD1_RS12430 5393696a747abc0bce0aabc5560d614e 140 SUPERFAMILY SSF55021 5 70 1.83E-14 T 22-04-2016 SMGD1_RS01620 8ded5e5da286b10735631c51fbdd3a43 103 Gene3D G3DSA:1.10.760.10 27 103 3.3E-16 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS01620 8ded5e5da286b10735631c51fbdd3a43 103 SUPERFAMILY SSF46626 27 102 6.45E-14 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS01620 8ded5e5da286b10735631c51fbdd3a43 103 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 26 100 1.7E-6 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS00785 45ea9699ae825a91e5974dfbe9461ccb 283 Gene3D G3DSA:3.40.1160.10 24 282 4.0E-96 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SMGD1_RS00785 45ea9699ae825a91e5974dfbe9461ccb 283 Hamap MF_00082_B Acetylglutamate kinase [argB]. 22 283 34.944 T 22-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SMGD1_RS00785 45ea9699ae825a91e5974dfbe9461ccb 283 Pfam PF00696 Amino acid kinase family 25 260 1.5E-46 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SMGD1_RS00785 45ea9699ae825a91e5974dfbe9461ccb 283 PIRSF PIRSF000728 6 283 6.3E-103 T 22-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SMGD1_RS00785 45ea9699ae825a91e5974dfbe9461ccb 283 PANTHER PTHR23342 5 283 6.5E-101 T 22-04-2016 SMGD1_RS00785 45ea9699ae825a91e5974dfbe9461ccb 283 TIGRFAM TIGR00761 argB: acetylglutamate kinase 26 258 8.2E-76 T 22-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SMGD1_RS00785 45ea9699ae825a91e5974dfbe9461ccb 283 SUPERFAMILY SSF53633 4 282 4.06E-86 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SMGD1_RS00785 45ea9699ae825a91e5974dfbe9461ccb 283 PRINTS PR00474 Glutamate 5-kinase family signature 55 69 5.3E-6 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 SMGD1_RS00785 45ea9699ae825a91e5974dfbe9461ccb 283 PRINTS PR00474 Glutamate 5-kinase family signature 183 210 5.3E-6 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 SMGD1_RS00785 45ea9699ae825a91e5974dfbe9461ccb 283 PRINTS PR00474 Glutamate 5-kinase family signature 233 253 5.3E-6 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 SMGD1_RS11710 31ea45ba3d84eceaf936f72ee67db7f9 275 PANTHER PTHR30294:SF26 1 225 3.5E-16 T 22-04-2016 SMGD1_RS11710 31ea45ba3d84eceaf936f72ee67db7f9 275 PANTHER PTHR30294:SF26 247 274 3.5E-16 T 22-04-2016 SMGD1_RS11710 31ea45ba3d84eceaf936f72ee67db7f9 275 Pfam PF12679 ABC-2 family transporter protein 7 274 1.3E-20 T 22-04-2016 IPR032688 ABC-2 family transporter protein GO:0006810 SMGD1_RS11710 31ea45ba3d84eceaf936f72ee67db7f9 275 PANTHER PTHR30294 1 225 3.5E-16 T 22-04-2016 SMGD1_RS11710 31ea45ba3d84eceaf936f72ee67db7f9 275 PANTHER PTHR30294 247 274 3.5E-16 T 22-04-2016 SMGD1_RS03150 17173326f3956e1b86dc830339feef67 318 PANTHER PTHR21666 145 275 6.1E-38 T 22-04-2016 SMGD1_RS03150 17173326f3956e1b86dc830339feef67 318 Pfam PF01551 Peptidase family M23 168 264 1.2E-28 T 22-04-2016 IPR016047 Peptidase M23 SMGD1_RS03150 17173326f3956e1b86dc830339feef67 318 SUPERFAMILY SSF51261 6 267 1.67E-50 T 22-04-2016 IPR011055 Duplicated hybrid motif SMGD1_RS03150 17173326f3956e1b86dc830339feef67 318 Gene3D G3DSA:2.70.70.10 142 269 2.3E-41 T 22-04-2016 SMGD1_RS06965 197586d13b27d4c40818b0030902925b 354 Pfam PF00891 O-methyltransferase 173 333 7.8E-10 T 22-04-2016 IPR001077 O-methyltransferase, family 2 GO:0008171 SMGD1_RS06965 197586d13b27d4c40818b0030902925b 354 Gene3D G3DSA:3.40.50.150 96 336 4.7E-28 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS06965 197586d13b27d4c40818b0030902925b 354 SUPERFAMILY SSF53335 96 348 4.55E-31 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS06965 197586d13b27d4c40818b0030902925b 354 SUPERFAMILY SSF46785 16 96 6.8E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMGD1_RS07755 8fee8711dd8ba73aca716ce2954d5c49 193 PANTHER PTHR12589 3 143 2.6E-15 T 22-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein SMGD1_RS07755 8fee8711dd8ba73aca716ce2954d5c49 193 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 3 143 6.0E-24 T 22-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein SMGD1_RS07755 8fee8711dd8ba73aca716ce2954d5c49 193 SUPERFAMILY SSF55620 1 144 1.61E-28 T 22-04-2016 SMGD1_RS07755 8fee8711dd8ba73aca716ce2954d5c49 193 PANTHER PTHR12589:SF5 3 143 2.6E-15 T 22-04-2016 SMGD1_RS07755 8fee8711dd8ba73aca716ce2954d5c49 193 Gene3D G3DSA:3.30.479.10 1 143 2.8E-33 T 22-04-2016 SMGD1_RS03405 91afdecff89459109121395c0d61ae3b 62 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 11 58 3.3E-12 T 22-04-2016 IPR010260 Prophage CP4-57 regulatory protein (AlpA) SMGD1_RS04590 09e267417140f75b6345bd1b53da988b 481 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 6 448 1.9E-135 T 22-04-2016 IPR003846 Uncharacterised protein family UPF0061 SMGD1_RS04590 09e267417140f75b6345bd1b53da988b 481 PANTHER PTHR32057 1 481 1.1E-179 T 22-04-2016 SMGD1_RS04590 09e267417140f75b6345bd1b53da988b 481 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 6 467 39.618 T 22-04-2016 IPR003846 Uncharacterised protein family UPF0061 SMGD1_RS09490 7667c33263a0b48d72db95b725e6f9e3 117 Gene3D G3DSA:3.90.10.10 66 95 9.2E-4 T 22-04-2016 SMGD1_RS09490 7667c33263a0b48d72db95b725e6f9e3 117 SUPERFAMILY SSF48695 16 93 1.31E-10 T 22-04-2016 IPR011031 Multihaem cytochrome SMGD1_RS09490 7667c33263a0b48d72db95b725e6f9e3 117 Gene3D G3DSA:1.10.1130.10 19 65 1.9E-4 T 22-04-2016 IPR012286 Tetrahaem cytochrome domain SMGD1_RS07165 2a33aca50b7568622abec22462bcf683 189 PANTHER PTHR35330 1 177 6.2E-40 T 22-04-2016 SMGD1_RS07165 2a33aca50b7568622abec22462bcf683 189 Gene3D G3DSA:3.40.50.720 1 112 8.7E-31 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS07165 2a33aca50b7568622abec22462bcf683 189 Gene3D G3DSA:3.30.160.110 113 148 4.1E-14 T 22-04-2016 SMGD1_RS07165 2a33aca50b7568622abec22462bcf683 189 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 175 2.7E-32 T 22-04-2016 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 SMGD1_RS07165 2a33aca50b7568622abec22462bcf683 189 Pfam PF14824 Sirohaem biosynthesis protein central 120 140 2.4E-6 T 22-04-2016 IPR028281 Siroheme synthase, central domain KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 SMGD1_RS07165 2a33aca50b7568622abec22462bcf683 189 SUPERFAMILY SSF51735 1 113 4.73E-20 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS07165 2a33aca50b7568622abec22462bcf683 189 SUPERFAMILY SSF75615 108 180 1.05E-15 T 22-04-2016 SMGD1_RS07165 2a33aca50b7568622abec22462bcf683 189 Pfam PF13241 Putative NAD(P)-binding 7 115 5.1E-24 T 22-04-2016 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 SMGD1_RS09380 3d9aa7666cb0ccc3cb8cccc3d5b7abe7 205 Pfam PF13177 DNA polymerase III, delta subunit 50 113 4.6E-13 T 22-04-2016 SMGD1_RS09380 3d9aa7666cb0ccc3cb8cccc3d5b7abe7 205 Gene3D G3DSA:3.40.50.300 43 110 4.9E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS09380 3d9aa7666cb0ccc3cb8cccc3d5b7abe7 205 SUPERFAMILY SSF52540 56 117 2.56E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS08895 d8e61af8364963184b08bd36f40e472a 446 Gene3D G3DSA:2.40.160.10 67 446 3.3E-50 T 22-04-2016 IPR023614 Porin domain SMGD1_RS08895 d8e61af8364963184b08bd36f40e472a 446 Pfam PF03573 outer membrane porin, OprD family 161 392 4.5E-7 T 22-04-2016 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 SMGD1_RS12190 fc3988abcb832275579aacf3a7c366f1 331 SUPERFAMILY SSF53335 2 329 1.83E-65 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS12190 fc3988abcb832275579aacf3a7c366f1 331 PANTHER PTHR12049 1 324 1.1E-12 T 22-04-2016 IPR003788 Putative S-adenosyl-L-methionine-dependent methyltransferase MidA SMGD1_RS12190 fc3988abcb832275579aacf3a7c366f1 331 Pfam PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase 59 272 5.6E-18 T 22-04-2016 IPR003788 Putative S-adenosyl-L-methionine-dependent methyltransferase MidA SMGD1_RS08570 dc86e52e75e6f25b72bf0da84543f455 199 PRINTS PR00354 7Fe ferredoxin signature 58 68 9.7E-5 T 22-04-2016 IPR000813 7Fe ferredoxin GO:0009055 SMGD1_RS08570 dc86e52e75e6f25b72bf0da84543f455 199 PRINTS PR00354 7Fe ferredoxin signature 68 78 9.7E-5 T 22-04-2016 IPR000813 7Fe ferredoxin GO:0009055 SMGD1_RS08570 dc86e52e75e6f25b72bf0da84543f455 199 PRINTS PR00354 7Fe ferredoxin signature 85 102 9.7E-5 T 22-04-2016 IPR000813 7Fe ferredoxin GO:0009055 SMGD1_RS08570 dc86e52e75e6f25b72bf0da84543f455 199 PANTHER PTHR11938:SF96 144 180 7.0E-68 T 22-04-2016 SMGD1_RS08570 dc86e52e75e6f25b72bf0da84543f455 199 PANTHER PTHR11938:SF96 1 126 7.0E-68 T 22-04-2016 SMGD1_RS08570 dc86e52e75e6f25b72bf0da84543f455 199 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 90 101 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SMGD1_RS08570 dc86e52e75e6f25b72bf0da84543f455 199 SUPERFAMILY SSF54862 5 183 2.09E-47 T 22-04-2016 SMGD1_RS08570 dc86e52e75e6f25b72bf0da84543f455 199 Pfam PF13247 4Fe-4S dicluster domain 54 167 2.4E-12 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SMGD1_RS08570 dc86e52e75e6f25b72bf0da84543f455 199 Gene3D G3DSA:3.30.70.20 5 65 6.8E-22 T 22-04-2016 SMGD1_RS08570 dc86e52e75e6f25b72bf0da84543f455 199 Gene3D G3DSA:3.30.70.20 122 180 6.8E-22 T 22-04-2016 SMGD1_RS08570 dc86e52e75e6f25b72bf0da84543f455 199 PANTHER PTHR11938 144 180 7.0E-68 T 22-04-2016 SMGD1_RS08570 dc86e52e75e6f25b72bf0da84543f455 199 PANTHER PTHR11938 1 126 7.0E-68 T 22-04-2016 SMGD1_RS08570 dc86e52e75e6f25b72bf0da84543f455 199 Gene3D G3DSA:3.30.70.20 66 121 2.5E-20 T 22-04-2016 SMGD1_RS13305 b65dd3c14b7c16bc57e487faa8a1c8ef 283 PANTHER PTHR30389 1 283 1.7E-116 T 22-04-2016 SMGD1_RS13305 b65dd3c14b7c16bc57e487faa8a1c8ef 283 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 12 282 3.9E-93 T 22-04-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 SMGD1_RS13305 b65dd3c14b7c16bc57e487faa8a1c8ef 283 Pfam PF05681 Fumarate hydratase (Fumerase) 11 281 7.4E-102 T 22-04-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 SMGD1_RS02630 5bb772f3a37681794548c647d2ae5015 269 PANTHER PTHR22916 1 265 1.7E-51 T 22-04-2016 SMGD1_RS02630 5bb772f3a37681794548c647d2ae5015 269 SUPERFAMILY SSF53448 3 209 1.04E-53 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMGD1_RS02630 5bb772f3a37681794548c647d2ae5015 269 Pfam PF00535 Glycosyl transferase family 2 4 157 4.3E-33 T 22-04-2016 IPR001173 Glycosyltransferase 2-like SMGD1_RS02630 5bb772f3a37681794548c647d2ae5015 269 Gene3D G3DSA:3.90.550.10 2 228 8.4E-58 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMGD1_RS08815 13f1fdedbdd0b51ceedf435372719030 359 PANTHER PTHR30563 1 344 3.5E-92 T 22-04-2016 SMGD1_RS08815 13f1fdedbdd0b51ceedf435372719030 359 Pfam PF02646 RmuC family 90 344 9.5E-89 T 22-04-2016 IPR003798 DNA recombination RmuC SMGD1_RS01425 b67b85ee3a17c3a964c086f6927185f9 407 PANTHER PTHR21666 41 404 3.7E-12 T 22-04-2016 SMGD1_RS01425 b67b85ee3a17c3a964c086f6927185f9 407 Pfam PF01551 Peptidase family M23 323 396 3.8E-14 T 22-04-2016 IPR016047 Peptidase M23 SMGD1_RS01425 b67b85ee3a17c3a964c086f6927185f9 407 PANTHER PTHR21666:SF200 41 404 3.7E-12 T 22-04-2016 SMGD1_RS01425 b67b85ee3a17c3a964c086f6927185f9 407 Gene3D G3DSA:2.70.70.10 271 406 3.8E-20 T 22-04-2016 SMGD1_RS01425 b67b85ee3a17c3a964c086f6927185f9 407 SUPERFAMILY SSF51261 272 404 4.39E-19 T 22-04-2016 IPR011055 Duplicated hybrid motif SMGD1_RS05350 277fe18943d7c0eb7993d6ae95419937 193 Pfam PF13649 Methyltransferase domain 52 136 2.7E-6 T 22-04-2016 SMGD1_RS05350 277fe18943d7c0eb7993d6ae95419937 193 Gene3D G3DSA:3.40.50.150 25 183 2.7E-11 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS05350 277fe18943d7c0eb7993d6ae95419937 193 SUPERFAMILY SSF53335 27 176 1.49E-13 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS10330 71f846399bedbdd50392628f7ff6e7bd 612 Pfam PF00990 Diguanylate cyclase, GGDEF domain 437 594 1.3E-42 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS10330 71f846399bedbdd50392628f7ff6e7bd 612 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 433 597 1.5E-50 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS10330 71f846399bedbdd50392628f7ff6e7bd 612 Gene3D G3DSA:3.30.70.270 439 604 1.3E-46 T 22-04-2016 SMGD1_RS10330 71f846399bedbdd50392628f7ff6e7bd 612 SMART SM00267 426 598 1.6E-52 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS10330 71f846399bedbdd50392628f7ff6e7bd 612 PANTHER PTHR10799 1 83 9.4E-21 T 22-04-2016 SMGD1_RS10330 71f846399bedbdd50392628f7ff6e7bd 612 PANTHER PTHR10799 470 608 9.4E-21 T 22-04-2016 SMGD1_RS10330 71f846399bedbdd50392628f7ff6e7bd 612 PANTHER PTHR10799:SF750 1 83 9.4E-21 T 22-04-2016 SMGD1_RS10330 71f846399bedbdd50392628f7ff6e7bd 612 PANTHER PTHR10799:SF750 470 608 9.4E-21 T 22-04-2016 SMGD1_RS10330 71f846399bedbdd50392628f7ff6e7bd 612 SUPERFAMILY SSF55073 442 600 4.16E-45 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS03625 6c2c4ed36d87709c6a57b407f0b90201 128 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 8 116 8.3E-19 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 SMGD1_RS03625 6c2c4ed36d87709c6a57b407f0b90201 128 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 6 124 17.57 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 SMGD1_RS03625 6c2c4ed36d87709c6a57b407f0b90201 128 TIGRFAM TIGR00494 crcB: protein CrcB 7 122 5.5E-24 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 SMGD1_RS03625 6c2c4ed36d87709c6a57b407f0b90201 128 PANTHER PTHR28259 1 127 8.4E-28 T 22-04-2016 SMGD1_RS09875 7661025ea3cc7fd6d71b8dfbb25f9d17 288 Gene3D G3DSA:3.40.50.720 2 162 5.1E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS09875 7661025ea3cc7fd6d71b8dfbb25f9d17 288 PANTHER PTHR10366 4 281 7.9E-44 T 22-04-2016 SMGD1_RS09875 7661025ea3cc7fd6d71b8dfbb25f9d17 288 Gene3D G3DSA:3.90.25.10 163 275 2.0E-18 T 22-04-2016 SMGD1_RS09875 7661025ea3cc7fd6d71b8dfbb25f9d17 288 SUPERFAMILY SSF51735 2 285 5.43E-58 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS09875 7661025ea3cc7fd6d71b8dfbb25f9d17 288 Pfam PF01370 NAD dependent epimerase/dehydratase family 5 217 1.8E-39 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 SMGD1_RS12300 eb2a0654552d0e6765d93356b41e63c4 460 Gene3D G3DSA:3.30.450.40 133 299 8.1E-19 T 22-04-2016 IPR029016 GAF domain-like SMGD1_RS12300 eb2a0654552d0e6765d93356b41e63c4 460 SUPERFAMILY SSF55781 122 284 4.58E-22 T 22-04-2016 IPR029016 GAF domain-like SMGD1_RS12300 eb2a0654552d0e6765d93356b41e63c4 460 SMART SM00267 292 460 9.2E-54 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS12300 eb2a0654552d0e6765d93356b41e63c4 460 Pfam PF00989 PAS fold 7 116 1.1E-11 T 22-04-2016 IPR013767 PAS fold GO:0006355 SMGD1_RS12300 eb2a0654552d0e6765d93356b41e63c4 460 PANTHER PTHR10799 336 459 1.8E-26 T 22-04-2016 SMGD1_RS12300 eb2a0654552d0e6765d93356b41e63c4 460 PANTHER PTHR10799 1 46 1.8E-26 T 22-04-2016 SMGD1_RS12300 eb2a0654552d0e6765d93356b41e63c4 460 Gene3D G3DSA:3.30.70.270 306 459 6.8E-49 T 22-04-2016 SMGD1_RS12300 eb2a0654552d0e6765d93356b41e63c4 460 SUPERFAMILY SSF55073 308 459 1.02E-44 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS12300 eb2a0654552d0e6765d93356b41e63c4 460 Pfam PF00990 Diguanylate cyclase, GGDEF domain 304 456 8.3E-45 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS12300 eb2a0654552d0e6765d93356b41e63c4 460 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 8 123 3.4E-10 T 22-04-2016 IPR000014 PAS domain SMGD1_RS12300 eb2a0654552d0e6765d93356b41e63c4 460 SMART SM00065 141 293 1.2E-4 T 22-04-2016 IPR003018 GAF domain GO:0005515 SMGD1_RS12300 eb2a0654552d0e6765d93356b41e63c4 460 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 299 459 2.3E-48 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS12300 eb2a0654552d0e6765d93356b41e63c4 460 Pfam PF13185 GAF domain 142 284 1.4E-9 T 22-04-2016 IPR003018 GAF domain GO:0005515 SMGD1_RS12300 eb2a0654552d0e6765d93356b41e63c4 460 SUPERFAMILY SSF55785 11 121 4.36E-17 T 22-04-2016 IPR000014 PAS domain SMGD1_RS12300 eb2a0654552d0e6765d93356b41e63c4 460 Gene3D G3DSA:3.30.450.20 9 121 1.7E-15 T 22-04-2016 SMGD1_RS12300 eb2a0654552d0e6765d93356b41e63c4 460 PANTHER PTHR10799:SF750 336 459 1.8E-26 T 22-04-2016 SMGD1_RS12300 eb2a0654552d0e6765d93356b41e63c4 460 PANTHER PTHR10799:SF750 1 46 1.8E-26 T 22-04-2016 SMGD1_RS02145 505abb1889ba147c0aba843d82989722 207 PANTHER PTHR39327 37 166 3.4E-32 T 22-04-2016 SMGD1_RS02145 505abb1889ba147c0aba843d82989722 207 PANTHER PTHR39327:SF1 37 166 3.4E-32 T 22-04-2016 SMGD1_RS02145 505abb1889ba147c0aba843d82989722 207 Pfam PF06035 Bacterial transglutaminase-like cysteine proteinase BTLCP 55 160 5.7E-15 T 22-04-2016 IPR010319 Transglutaminase-like cysteine peptidase, predicted SMGD1_RS13775 f091d22c387e03495d6cc430e9761106 306 Gene3D G3DSA:3.20.20.60 34 255 3.2E-44 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SMGD1_RS13775 f091d22c387e03495d6cc430e9761106 306 PANTHER PTHR32308 35 305 4.1E-39 T 22-04-2016 IPR011206 Citrate lyase beta subunit-like SMGD1_RS13775 f091d22c387e03495d6cc430e9761106 306 PIRSF PIRSF015582 28 306 4.5E-36 T 22-04-2016 IPR011206 Citrate lyase beta subunit-like SMGD1_RS13775 f091d22c387e03495d6cc430e9761106 306 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 35 245 1.0E-22 T 22-04-2016 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 SMGD1_RS13775 f091d22c387e03495d6cc430e9761106 306 SUPERFAMILY SSF51621 34 255 4.89E-41 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SMGD1_RS03575 93344eaf51262e1935d3f50b195d2f39 171 PANTHER PTHR21087 2 168 9.8E-35 T 22-04-2016 SMGD1_RS03575 93344eaf51262e1935d3f50b195d2f39 171 Gene3D G3DSA:3.40.50.300 1 169 1.1E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS03575 93344eaf51262e1935d3f50b195d2f39 171 Hamap MF_00109 Shikimate kinase [aroK]. 1 168 22.71 T 22-04-2016 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 SMGD1_RS03575 93344eaf51262e1935d3f50b195d2f39 171 PANTHER PTHR21087:SF0 2 168 9.8E-35 T 22-04-2016 SMGD1_RS03575 93344eaf51262e1935d3f50b195d2f39 171 PRINTS PR01100 Shikimate kinase family signature 92 109 5.0E-18 T 22-04-2016 SMGD1_RS03575 93344eaf51262e1935d3f50b195d2f39 171 PRINTS PR01100 Shikimate kinase family signature 75 84 5.0E-18 T 22-04-2016 SMGD1_RS03575 93344eaf51262e1935d3f50b195d2f39 171 PRINTS PR01100 Shikimate kinase family signature 4 19 5.0E-18 T 22-04-2016 SMGD1_RS03575 93344eaf51262e1935d3f50b195d2f39 171 PRINTS PR01100 Shikimate kinase family signature 28 41 5.0E-18 T 22-04-2016 SMGD1_RS03575 93344eaf51262e1935d3f50b195d2f39 171 PRINTS PR01100 Shikimate kinase family signature 56 64 5.0E-18 T 22-04-2016 SMGD1_RS03575 93344eaf51262e1935d3f50b195d2f39 171 SUPERFAMILY SSF52540 1 165 2.06E-22 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS03575 93344eaf51262e1935d3f50b195d2f39 171 Pfam PF01202 Shikimate kinase 10 167 1.9E-28 T 22-04-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 SMGD1_RS07970 983b00cba6a6241d8dc0e0ee329b2e44 242 Pfam PF17131 Outer membrane lipoprotein-sorting protein 62 239 8.3E-41 T 22-04-2016 IPR033399 Putative outer membrane lipoprotein-sorting protein SMGD1_RS07970 983b00cba6a6241d8dc0e0ee329b2e44 242 Gene3D G3DSA:2.50.20.10 16 240 4.5E-50 T 22-04-2016 SMGD1_RS13780 3694d20efc8b68090a34397ccb7e998b 114 Gene3D G3DSA:1.10.760.10 37 111 1.5E-6 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS13780 3694d20efc8b68090a34397ccb7e998b 114 SUPERFAMILY SSF46626 11 107 5.82E-9 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS02575 078e197358e3eb99ccfe13ea8789d73c 375 Gene3D G3DSA:3.40.640.10 3 248 7.4E-78 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SMGD1_RS02575 078e197358e3eb99ccfe13ea8789d73c 375 PANTHER PTHR30244 1 375 1.4E-104 T 22-04-2016 SMGD1_RS02575 078e197358e3eb99ccfe13ea8789d73c 375 TIGRFAM TIGR03588 PseC: UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase 3 374 1.7E-134 T 22-04-2016 IPR020026 UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase SMGD1_RS02575 078e197358e3eb99ccfe13ea8789d73c 375 SUPERFAMILY SSF53383 3 375 8.3E-110 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SMGD1_RS02575 078e197358e3eb99ccfe13ea8789d73c 375 PANTHER PTHR30244:SF3 1 375 1.4E-104 T 22-04-2016 SMGD1_RS02575 078e197358e3eb99ccfe13ea8789d73c 375 Gene3D G3DSA:3.90.1150.10 250 375 5.9E-32 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SMGD1_RS02575 078e197358e3eb99ccfe13ea8789d73c 375 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 11 370 1.1E-100 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase SMGD1_RS02575 078e197358e3eb99ccfe13ea8789d73c 375 PIRSF PIRSF000390 1 375 1.7E-100 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase SMGD1_RS02595 a2f6c1ae9cc61e04a34bcce8bdf3dbd9 373 Gene3D G3DSA:3.40.50.720 3 192 1.6E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS02595 a2f6c1ae9cc61e04a34bcce8bdf3dbd9 373 Gene3D G3DSA:3.90.25.10 305 363 3.8E-51 T 22-04-2016 SMGD1_RS02595 a2f6c1ae9cc61e04a34bcce8bdf3dbd9 373 Gene3D G3DSA:3.90.25.10 195 249 3.8E-51 T 22-04-2016 SMGD1_RS02595 a2f6c1ae9cc61e04a34bcce8bdf3dbd9 373 Hamap MF_00955 GDP-mannose 4,6-dehydratase [gmd]. 5 357 55.223 T 22-04-2016 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|UniPathway: UPA00128 SMGD1_RS02595 a2f6c1ae9cc61e04a34bcce8bdf3dbd9 373 TIGRFAM TIGR01472 gmd: GDP-mannose 4,6-dehydratase 5 355 1.0E-180 T 22-04-2016 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|UniPathway: UPA00128 SMGD1_RS02595 a2f6c1ae9cc61e04a34bcce8bdf3dbd9 373 PANTHER PTHR10366:SF32 311 358 1.3E-207 T 22-04-2016 SMGD1_RS02595 a2f6c1ae9cc61e04a34bcce8bdf3dbd9 373 PANTHER PTHR10366:SF32 6 284 1.3E-207 T 22-04-2016 SMGD1_RS02595 a2f6c1ae9cc61e04a34bcce8bdf3dbd9 373 PANTHER PTHR10366 311 358 1.3E-207 T 22-04-2016 SMGD1_RS02595 a2f6c1ae9cc61e04a34bcce8bdf3dbd9 373 PANTHER PTHR10366 6 284 1.3E-207 T 22-04-2016 SMGD1_RS02595 a2f6c1ae9cc61e04a34bcce8bdf3dbd9 373 Pfam PF16363 GDP-mannose 4,6 dehydratase 8 347 5.7E-156 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS02595 a2f6c1ae9cc61e04a34bcce8bdf3dbd9 373 SUPERFAMILY SSF51735 5 353 5.53E-80 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS05130 a03fc5144be77a7bbcde133dd2f0a3c5 158 SUPERFAMILY SSF53167 4 80 1.05E-7 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SMGD1_RS05130 a03fc5144be77a7bbcde133dd2f0a3c5 158 Gene3D G3DSA:3.40.50.1580 3 77 2.8E-8 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SMGD1_RS08355 d9159cf7f869f0c1adf92362cd879bd0 267 SMART SM00271 205 267 1.1E-10 T 22-04-2016 IPR001623 DnaJ domain SMGD1_RS08355 d9159cf7f869f0c1adf92362cd879bd0 267 SUPERFAMILY SSF46565 173 263 3.01E-16 T 22-04-2016 IPR001623 DnaJ domain SMGD1_RS08355 d9159cf7f869f0c1adf92362cd879bd0 267 Pfam PF00226 DnaJ domain 207 263 1.4E-12 T 22-04-2016 IPR001623 DnaJ domain SMGD1_RS08355 d9159cf7f869f0c1adf92362cd879bd0 267 PRINTS PR00625 DnaJ domain signature 226 241 4.8E-7 T 22-04-2016 IPR001623 DnaJ domain SMGD1_RS08355 d9159cf7f869f0c1adf92362cd879bd0 267 PRINTS PR00625 DnaJ domain signature 248 267 4.8E-7 T 22-04-2016 IPR001623 DnaJ domain SMGD1_RS08355 d9159cf7f869f0c1adf92362cd879bd0 267 PRINTS PR00625 DnaJ domain signature 208 226 4.8E-7 T 22-04-2016 IPR001623 DnaJ domain SMGD1_RS08355 d9159cf7f869f0c1adf92362cd879bd0 267 Gene3D G3DSA:1.10.287.110 204 263 4.2E-15 T 22-04-2016 IPR001623 DnaJ domain SMGD1_RS14385 e20d45c341b14e193840d06a4c2889a2 387 PANTHER PTHR37958:SF1 7 387 3.6E-34 T 22-04-2016 SMGD1_RS14385 e20d45c341b14e193840d06a4c2889a2 387 Pfam PF01699 Sodium/calcium exchanger protein 244 385 1.4E-11 T 22-04-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 SMGD1_RS14385 e20d45c341b14e193840d06a4c2889a2 387 Pfam PF01699 Sodium/calcium exchanger protein 46 198 7.8E-10 T 22-04-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 SMGD1_RS14385 e20d45c341b14e193840d06a4c2889a2 387 PANTHER PTHR37958 7 387 3.6E-34 T 22-04-2016 SMGD1_RS06645 1145241b9b4c8b9b7969fe879fa81010 376 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 201 375 1.6E-19 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 SMGD1_RS06645 1145241b9b4c8b9b7969fe879fa81010 376 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 28 147 2.6E-19 T 22-04-2016 IPR000014 PAS domain SMGD1_RS06645 1145241b9b4c8b9b7969fe879fa81010 376 SMART SM00086 99 141 5.8E-7 T 22-04-2016 IPR001610 PAC motif SMGD1_RS06645 1145241b9b4c8b9b7969fe879fa81010 376 Gene3D G3DSA:3.30.450.20 39 140 7.2E-27 T 22-04-2016 SMGD1_RS06645 1145241b9b4c8b9b7969fe879fa81010 376 Pfam PF13426 PAS domain 43 139 6.2E-15 T 22-04-2016 IPR000014 PAS domain SMGD1_RS06645 1145241b9b4c8b9b7969fe879fa81010 376 SMART SM00331 174 376 7.1E-6 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 SMGD1_RS06645 1145241b9b4c8b9b7969fe879fa81010 376 PANTHER PTHR24423 15 162 1.4E-16 T 22-04-2016 SMGD1_RS06645 1145241b9b4c8b9b7969fe879fa81010 376 SUPERFAMILY SSF55785 38 138 1.22E-28 T 22-04-2016 IPR000014 PAS domain SMGD1_RS06645 1145241b9b4c8b9b7969fe879fa81010 376 SMART SM00091 28 94 0.0028 T 22-04-2016 IPR000014 PAS domain SMGD1_RS00550 5789dfaaa9109be50cb4ce34d00204eb 405 PANTHER PTHR30574 1 349 9.0E-183 T 22-04-2016 SMGD1_RS00550 5789dfaaa9109be50cb4ce34d00204eb 405 PANTHER PTHR30574:SF6 1 349 9.0E-183 T 22-04-2016 SMGD1_RS00550 5789dfaaa9109be50cb4ce34d00204eb 405 Pfam PF04143 Sulphur transport 9 161 4.9E-24 T 22-04-2016 IPR007272 Sulphur transport domain SMGD1_RS00550 5789dfaaa9109be50cb4ce34d00204eb 405 Pfam PF04143 Sulphur transport 242 398 9.1E-23 T 22-04-2016 IPR007272 Sulphur transport domain SMGD1_RS06350 a2cca1511d1e224ea786393b3dced2a7 212 PANTHER PTHR11579 23 205 7.2E-44 T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 SMGD1_RS06350 a2cca1511d1e224ea786393b3dced2a7 212 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 6 211 9.0E-71 T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 SMGD1_RS06350 a2cca1511d1e224ea786393b3dced2a7 212 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 133 148 - T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 SMGD1_RS06350 a2cca1511d1e224ea786393b3dced2a7 212 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 12 209 6.2E-61 T 22-04-2016 SMGD1_RS06350 a2cca1511d1e224ea786393b3dced2a7 212 Gene3D G3DSA:3.40.50.150 22 209 2.1E-51 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS06350 a2cca1511d1e224ea786393b3dced2a7 212 SUPERFAMILY SSF53335 21 210 8.05E-35 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS13070 ee80fffd6914dfc90d6999c50eb7a156 189 PANTHER PTHR32089:SF52 44 99 1.5E-14 T 22-04-2016 SMGD1_RS13070 ee80fffd6914dfc90d6999c50eb7a156 189 Gene3D G3DSA:3.30.450.20 22 98 3.9E-15 T 22-04-2016 SMGD1_RS13070 ee80fffd6914dfc90d6999c50eb7a156 189 Pfam PF08447 PAS fold 33 98 7.5E-11 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 SMGD1_RS13070 ee80fffd6914dfc90d6999c50eb7a156 189 SUPERFAMILY SSF55785 22 99 1.33E-19 T 22-04-2016 IPR000014 PAS domain SMGD1_RS13070 ee80fffd6914dfc90d6999c50eb7a156 189 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 16 98 1.1E-12 T 22-04-2016 IPR000014 PAS domain SMGD1_RS13070 ee80fffd6914dfc90d6999c50eb7a156 189 PANTHER PTHR32089 44 99 1.5E-14 T 22-04-2016 SMGD1_RS06450 ad624b2d3a91eb92cfac2874d158b451 221 PANTHER PTHR30435:SF15 28 220 1.0E-27 T 22-04-2016 SMGD1_RS06450 ad624b2d3a91eb92cfac2874d158b451 221 PANTHER PTHR30435 28 220 1.0E-27 T 22-04-2016 SMGD1_RS06450 ad624b2d3a91eb92cfac2874d158b451 221 Pfam PF13860 FlgD Ig-like domain 103 178 4.3E-19 T 22-04-2016 IPR025965 FlgD Ig-like domain SMGD1_RS06450 ad624b2d3a91eb92cfac2874d158b451 221 Pfam PF03963 Flagellar hook capping protein - N-terminal region 9 77 1.4E-16 T 22-04-2016 IPR005648 Flagellar hook capping protein SMGD1_RS06925 e1e0924fb2c723370a77b175fe7fe41f 334 Pfam PF14399 Butirosin biosynthesis protein H, N-terminal 13 144 1.2E-45 T 22-04-2016 IPR026935 Butirosin biosynthesis protein H, N-terminal KEGG: 00524+2.3.2.19|MetaCyc: PWY-7019|UniPathway: UPA00964 SMGD1_RS06925 e1e0924fb2c723370a77b175fe7fe41f 334 Pfam PF16169 Domain of unknown function (DUF4872) 156 326 1.3E-49 T 22-04-2016 IPR032369 Domain of unknown function DUF4872 SMGD1_RS03570 0ec1e9372cda164db588bed26bb620dd 141 SUPERFAMILY SSF52833 15 135 1.61E-16 T 22-04-2016 IPR012336 Thioredoxin-like fold SMGD1_RS03570 0ec1e9372cda164db588bed26bb620dd 141 Gene3D G3DSA:3.40.30.10 20 133 2.7E-19 T 22-04-2016 IPR012336 Thioredoxin-like fold SMGD1_RS03570 0ec1e9372cda164db588bed26bb620dd 141 Pfam PF13899 Thioredoxin-like 23 104 1.5E-6 T 22-04-2016 SMGD1_RS05800 60560a4ec08839e69f77724b5c5c889f 312 Gene3D G3DSA:3.30.310.70 42 153 3.9E-9 T 22-04-2016 IPR005180 Domain of unknown function DUF302 SMGD1_RS05800 60560a4ec08839e69f77724b5c5c889f 312 Gene3D G3DSA:3.30.310.70 194 310 4.7E-15 T 22-04-2016 IPR005180 Domain of unknown function DUF302 SMGD1_RS05800 60560a4ec08839e69f77724b5c5c889f 312 SUPERFAMILY SSF103247 192 310 2.62E-16 T 22-04-2016 IPR005180 Domain of unknown function DUF302 SMGD1_RS05800 60560a4ec08839e69f77724b5c5c889f 312 SUPERFAMILY SSF103247 41 155 1.44E-9 T 22-04-2016 IPR005180 Domain of unknown function DUF302 SMGD1_RS06585 b017afdf2e2bb93ba99dbc6ddcf9dc43 295 Pfam PF04338 Protein of unknown function, DUF481 63 294 1.7E-43 T 22-04-2016 IPR007433 Protein of unknown function DUF481 SMGD1_RS11880 36ff23e75a0640d3890f56652b8b73b6 564 Gene3D G3DSA:1.10.645.10 1 547 1.4E-185 T 22-04-2016 IPR029014 NiFe hydrogenase-like SMGD1_RS11880 36ff23e75a0640d3890f56652b8b73b6 564 PANTHER PTHR11993 187 251 4.3E-147 T 22-04-2016 SMGD1_RS11880 36ff23e75a0640d3890f56652b8b73b6 564 PANTHER PTHR11993 1 116 4.3E-147 T 22-04-2016 SMGD1_RS11880 36ff23e75a0640d3890f56652b8b73b6 564 PANTHER PTHR11993 351 554 4.3E-147 T 22-04-2016 SMGD1_RS11880 36ff23e75a0640d3890f56652b8b73b6 564 ProSitePatterns PS00508 Nickel-dependent hydrogenases large subunit signature 2. 538 547 - T 22-04-2016 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 SMGD1_RS11880 36ff23e75a0640d3890f56652b8b73b6 564 PANTHER PTHR11993:SF11 187 251 4.3E-147 T 22-04-2016 SMGD1_RS11880 36ff23e75a0640d3890f56652b8b73b6 564 PANTHER PTHR11993:SF11 1 116 4.3E-147 T 22-04-2016 SMGD1_RS11880 36ff23e75a0640d3890f56652b8b73b6 564 PANTHER PTHR11993:SF11 351 554 4.3E-147 T 22-04-2016 SMGD1_RS11880 36ff23e75a0640d3890f56652b8b73b6 564 Pfam PF00374 Nickel-dependent hydrogenase 39 547 4.1E-197 T 22-04-2016 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 SMGD1_RS11880 36ff23e75a0640d3890f56652b8b73b6 564 SUPERFAMILY SSF56762 1 547 1.31E-148 T 22-04-2016 IPR029014 NiFe hydrogenase-like SMGD1_RS07680 79c98293e201cb44ef66ead6812b7d48 250 PANTHER PTHR39963 6 208 1.9E-26 T 22-04-2016 SMGD1_RS07680 79c98293e201cb44ef66ead6812b7d48 250 SUPERFAMILY SSF53335 56 195 1.07E-13 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS07680 79c98293e201cb44ef66ead6812b7d48 250 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 133 212 2.0E-20 T 22-04-2016 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 SMGD1_RS07680 79c98293e201cb44ef66ead6812b7d48 250 Gene3D G3DSA:3.40.50.150 13 222 2.8E-43 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS09780 31ed807f065945b077dec10788ff585b 197 Pfam PF07437 YfaZ precursor 99 197 2.4E-8 T 22-04-2016 IPR009998 YfaZ SMGD1_RS05725 ac29607a923b06e4950812ea973d54f0 189 Pfam PF01292 Prokaryotic cytochrome b561 2 187 1.3E-24 T 22-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 SMGD1_RS05725 ac29607a923b06e4950812ea973d54f0 189 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 5 28 3.3E-7 T 22-04-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 SMGD1_RS05725 ac29607a923b06e4950812ea973d54f0 189 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 113 132 3.3E-7 T 22-04-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 SMGD1_RS05725 ac29607a923b06e4950812ea973d54f0 189 Gene3D G3DSA:1.20.950.20 3 96 2.9E-5 T 22-04-2016 SMGD1_RS05725 ac29607a923b06e4950812ea973d54f0 189 Gene3D G3DSA:1.20.950.20 112 188 3.1E-6 T 22-04-2016 SMGD1_RS05725 ac29607a923b06e4950812ea973d54f0 189 SUPERFAMILY SSF81342 69 188 9.42E-25 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 SMGD1_RS05725 ac29607a923b06e4950812ea973d54f0 189 SUPERFAMILY SSF81342 2 38 9.42E-25 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 SMGD1_RS10240 993433f966deabce2f29b057bae0a5d8 89 SUPERFAMILY SSF158414 4 79 4.84E-24 T 22-04-2016 IPR029013 HP0062-like domain SMGD1_RS10240 993433f966deabce2f29b057bae0a5d8 89 Pfam PF06013 Proteins of 100 residues with WXG 3 85 5.4E-7 T 22-04-2016 IPR010310 Type VII secretion system ESAT-6-like SMGD1_RS10240 993433f966deabce2f29b057bae0a5d8 89 Gene3D G3DSA:1.10.287.850 1 88 2.6E-28 T 22-04-2016 IPR029013 HP0062-like domain SMGD1_RS08660 01874105f5ecbae76658eeee054b44fa 443 PANTHER PTHR38075 33 442 6.8E-37 T 22-04-2016 SMGD1_RS11385 a904229d79e3bb895a0574e3defaa764 177 SUPERFAMILY SSF47928 4 98 1.24E-12 T 22-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain SMGD1_RS11385 a904229d79e3bb895a0574e3defaa764 177 Pfam PF00213 ATP synthase delta (OSCP) subunit 5 155 1.5E-16 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 SMGD1_RS11385 a904229d79e3bb895a0574e3defaa764 177 Gene3D G3DSA:1.10.520.20 5 96 1.7E-12 T 22-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain SMGD1_RS04440 acf0a381254b54995ffa31678f600ffe 155 ProSitePatterns PS00052 Ribosomal protein S7 signature. 19 45 - T 22-04-2016 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 SMGD1_RS04440 acf0a381254b54995ffa31678f600ffe 155 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 155 35.166 T 22-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 SMGD1_RS04440 acf0a381254b54995ffa31678f600ffe 155 SUPERFAMILY SSF47973 6 148 1.7E-59 T 22-04-2016 IPR023798 Ribosomal protein S7 domain SMGD1_RS04440 acf0a381254b54995ffa31678f600ffe 155 PANTHER PTHR11205 1 155 1.8E-83 T 22-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 SMGD1_RS04440 acf0a381254b54995ffa31678f600ffe 155 PIRSF PIRSF002122 2 155 8.3E-59 T 22-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 SMGD1_RS04440 acf0a381254b54995ffa31678f600ffe 155 Pfam PF00177 Ribosomal protein S7p/S5e 2 148 5.8E-64 T 22-04-2016 IPR023798 Ribosomal protein S7 domain SMGD1_RS04440 acf0a381254b54995ffa31678f600ffe 155 Gene3D G3DSA:1.10.455.10 6 155 2.9E-65 T 22-04-2016 IPR023798 Ribosomal protein S7 domain SMGD1_RS04440 acf0a381254b54995ffa31678f600ffe 155 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 2 155 4.0E-69 T 22-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 SMGD1_RS12400 2f6b94387e97ad0f2be23fc9019b6cfc 125 PANTHER PTHR24198 31 124 3.3E-23 T 22-04-2016 SMGD1_RS12400 2f6b94387e97ad0f2be23fc9019b6cfc 125 Pfam PF12796 Ankyrin repeats (3 copies) 16 100 9.9E-12 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain SMGD1_RS12400 2f6b94387e97ad0f2be23fc9019b6cfc 125 SMART SM00248 38 67 1.2E-4 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 SMGD1_RS12400 2f6b94387e97ad0f2be23fc9019b6cfc 125 SMART SM00248 71 100 0.11 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 SMGD1_RS12400 2f6b94387e97ad0f2be23fc9019b6cfc 125 SUPERFAMILY SSF48403 3 124 1.38E-27 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain SMGD1_RS12400 2f6b94387e97ad0f2be23fc9019b6cfc 125 Gene3D G3DSA:1.25.40.20 14 124 3.2E-25 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain SMGD1_RS08335 39a14cf309979664c36c5b398a1d75a8 325 Pfam PF03595 Voltage-dependent anion channel 14 311 4.9E-56 T 22-04-2016 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 SMGD1_RS08335 39a14cf309979664c36c5b398a1d75a8 325 PANTHER PTHR37955 4 319 4.5E-30 T 22-04-2016 SMGD1_RS08335 39a14cf309979664c36c5b398a1d75a8 325 PANTHER PTHR37955:SF1 4 319 4.5E-30 T 22-04-2016 SMGD1_RS14045 120e523812684c88927a5d369d4efd7d 393 Pfam PF00691 OmpA family 258 365 1.6E-13 T 22-04-2016 IPR006665 OmpA-like domain SMGD1_RS14045 120e523812684c88927a5d369d4efd7d 393 SUPERFAMILY SSF103088 239 372 1.83E-19 T 22-04-2016 IPR006665 OmpA-like domain SMGD1_RS14045 120e523812684c88927a5d369d4efd7d 393 Gene3D G3DSA:3.30.1330.60 242 373 4.9E-27 T 22-04-2016 IPR006665 OmpA-like domain SMGD1_RS04330 e7696d03366093617d67378abd1152d2 353 SUPERFAMILY SSF56014 258 342 2.09E-10 T 22-04-2016 SMGD1_RS04330 e7696d03366093617d67378abd1152d2 353 Gene3D G3DSA:3.20.20.120 60 129 1.8E-5 T 22-04-2016 IPR029065 Enolase C-terminal domain-like SMGD1_RS04330 e7696d03366093617d67378abd1152d2 353 Pfam PF04551 GcpE protein 7 346 1.5E-131 T 22-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 SMGD1_RS04330 e7696d03366093617d67378abd1152d2 353 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 4 343 3.9E-120 T 22-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 SMGD1_RS04330 e7696d03366093617d67378abd1152d2 353 PIRSF PIRSF004640 1 353 1.1E-141 T 22-04-2016 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 SMGD1_RS04330 e7696d03366093617d67378abd1152d2 353 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 2 350 33.554 T 22-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 SMGD1_RS04330 e7696d03366093617d67378abd1152d2 353 PANTHER PTHR30454 2 351 2.3E-166 T 22-04-2016 SMGD1_RS04330 e7696d03366093617d67378abd1152d2 353 SUPERFAMILY SSF51717 31 224 3.92E-9 T 22-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 SMGD1_RS02070 d5c4d0bde54607708a683f05f71cc0b2 1061 PANTHER PTHR11606:SF1 590 836 9.0E-201 T 22-04-2016 SMGD1_RS02070 d5c4d0bde54607708a683f05f71cc0b2 1061 PANTHER PTHR11606:SF1 150 565 9.0E-201 T 22-04-2016 SMGD1_RS02070 d5c4d0bde54607708a683f05f71cc0b2 1061 PANTHER PTHR11606:SF1 35 45 9.0E-201 T 22-04-2016 SMGD1_RS02070 d5c4d0bde54607708a683f05f71cc0b2 1061 Pfam PF05088 Bacterial NAD-glutamate dehydrogenase 33 1057 1.8E-298 T 22-04-2016 IPR028971 NAD-glutamate dehydrogenase GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 SMGD1_RS02070 d5c4d0bde54607708a683f05f71cc0b2 1061 SUPERFAMILY SSF51735 551 684 2.19E-20 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS02070 d5c4d0bde54607708a683f05f71cc0b2 1061 SUPERFAMILY SSF51735 413 515 2.19E-20 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS02070 d5c4d0bde54607708a683f05f71cc0b2 1061 SUPERFAMILY SSF53223 232 408 3.64E-13 T 22-04-2016 SMGD1_RS02070 d5c4d0bde54607708a683f05f71cc0b2 1061 Gene3D G3DSA:3.40.50.720 576 670 5.7E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS02070 d5c4d0bde54607708a683f05f71cc0b2 1061 Gene3D G3DSA:3.40.50.720 412 521 5.7E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS02070 d5c4d0bde54607708a683f05f71cc0b2 1061 PANTHER PTHR11606 590 836 9.0E-201 T 22-04-2016 SMGD1_RS02070 d5c4d0bde54607708a683f05f71cc0b2 1061 PANTHER PTHR11606 150 565 9.0E-201 T 22-04-2016 SMGD1_RS02070 d5c4d0bde54607708a683f05f71cc0b2 1061 PANTHER PTHR11606 35 45 9.0E-201 T 22-04-2016 SMGD1_RS11575 1efbec29586047ea3cdb68c4630a9bf9 129 Pfam PF03646 FlaG protein 30 126 4.5E-21 T 22-04-2016 IPR005186 FlaG protein SMGD1_RS11575 1efbec29586047ea3cdb68c4630a9bf9 129 PANTHER PTHR37166:SF1 3 129 2.3E-13 T 22-04-2016 SMGD1_RS11575 1efbec29586047ea3cdb68c4630a9bf9 129 SUPERFAMILY SSF160214 46 128 1.15E-19 T 22-04-2016 IPR005186 FlaG protein SMGD1_RS11575 1efbec29586047ea3cdb68c4630a9bf9 129 PANTHER PTHR37166 3 129 2.3E-13 T 22-04-2016 SMGD1_RS11575 1efbec29586047ea3cdb68c4630a9bf9 129 Gene3D G3DSA:3.30.160.170 54 125 1.0E-20 T 22-04-2016 IPR005186 FlaG protein SMGD1_RS01860 1f07c342e077970d6e924f2b206487db 123 Pfam PF00072 Response regulator receiver domain 4 116 1.9E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS01860 1f07c342e077970d6e924f2b206487db 123 Gene3D G3DSA:3.40.50.2300 2 121 7.3E-29 T 22-04-2016 SMGD1_RS01860 1f07c342e077970d6e924f2b206487db 123 SMART SM00448 2 116 4.9E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS01860 1f07c342e077970d6e924f2b206487db 123 PANTHER PTHR26402 2 121 8.7E-28 T 22-04-2016 SMGD1_RS01860 1f07c342e077970d6e924f2b206487db 123 SUPERFAMILY SSF52172 2 121 3.42E-28 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS11875 a84f6482fce156d765b38ed8a34ff560 516 Gene3D G3DSA:3.30.750.24 414 512 1.2E-10 T 22-04-2016 IPR002645 STAS domain SMGD1_RS11875 a84f6482fce156d765b38ed8a34ff560 516 SUPERFAMILY SSF52091 415 515 1.49E-11 T 22-04-2016 IPR002645 STAS domain SMGD1_RS11875 a84f6482fce156d765b38ed8a34ff560 516 PANTHER PTHR11814 2 515 3.0E-170 T 22-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 SMGD1_RS11875 a84f6482fce156d765b38ed8a34ff560 516 Pfam PF01740 STAS domain 416 512 7.2E-11 T 22-04-2016 IPR002645 STAS domain SMGD1_RS11875 a84f6482fce156d765b38ed8a34ff560 516 PANTHER PTHR11814:SF97 2 515 3.0E-170 T 22-04-2016 SMGD1_RS11875 a84f6482fce156d765b38ed8a34ff560 516 Pfam PF00916 Sulfate permease family 3 361 3.0E-75 T 22-04-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 SMGD1_RS05860 8a2c69362982ad114ec49e2b60585fde 119 Gene3D G3DSA:1.10.760.10 29 116 1.1E-15 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS05860 8a2c69362982ad114ec49e2b60585fde 119 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 31 114 4.6E-8 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS05860 8a2c69362982ad114ec49e2b60585fde 119 SUPERFAMILY SSF46626 8 117 2.29E-14 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS00225 bf9670c1303ed3a82713d4dda13488f9 120 Gene3D G3DSA:1.10.760.10 14 97 9.9E-20 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS00225 bf9670c1303ed3a82713d4dda13488f9 120 SUPERFAMILY SSF46626 8 97 8.11E-17 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS00225 bf9670c1303ed3a82713d4dda13488f9 120 Pfam PF00034 Cytochrome c 21 97 2.7E-9 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS06410 e6999b2c9628042afdec5ebc52ea5ced 377 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 142 171 2.7E-19 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SMGD1_RS06410 e6999b2c9628042afdec5ebc52ea5ced 377 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 244 273 2.7E-19 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SMGD1_RS06410 e6999b2c9628042afdec5ebc52ea5ced 377 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 215 242 2.7E-19 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SMGD1_RS06410 e6999b2c9628042afdec5ebc52ea5ced 377 PANTHER PTHR32089 86 285 3.1E-33 T 22-04-2016 SMGD1_RS06410 e6999b2c9628042afdec5ebc52ea5ced 377 PANTHER PTHR32089 305 377 3.1E-33 T 22-04-2016 SMGD1_RS06410 e6999b2c9628042afdec5ebc52ea5ced 377 Gene3D G3DSA:1.10.287.950 137 366 2.6E-38 T 22-04-2016 SMGD1_RS06410 e6999b2c9628042afdec5ebc52ea5ced 377 SUPERFAMILY SSF58104 99 370 3.01E-45 T 22-04-2016 SMGD1_RS06410 e6999b2c9628042afdec5ebc52ea5ced 377 SMART SM00283 96 371 2.9E-26 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SMGD1_RS06410 e6999b2c9628042afdec5ebc52ea5ced 377 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 182 365 1.3E-29 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SMGD1_RS00750 8c861896f16da40f7648a214a9d51943 278 Gene3D G3DSA:3.40.30.10 124 275 7.7E-24 T 22-04-2016 IPR012336 Thioredoxin-like fold SMGD1_RS00750 8c861896f16da40f7648a214a9d51943 278 SUPERFAMILY SSF52833 120 267 2.09E-22 T 22-04-2016 IPR012336 Thioredoxin-like fold SMGD1_RS00750 8c861896f16da40f7648a214a9d51943 278 Pfam PF13462 Thioredoxin 122 271 2.5E-12 T 22-04-2016 IPR012336 Thioredoxin-like fold SMGD1_RS14375 52d4fd2ea47e164fbb4b9350d6f8fa23 423 Gene3D G3DSA:3.40.50.2300 93 198 5.2E-4 T 22-04-2016 SMGD1_RS00275 99b4de32a5cc0dea63a68dfa94c32283 124 Gene3D G3DSA:3.40.30.10 20 121 1.3E-21 T 22-04-2016 IPR012336 Thioredoxin-like fold SMGD1_RS00275 99b4de32a5cc0dea63a68dfa94c32283 124 Pfam PF03190 Protein of unknown function, DUF255 24 77 6.6E-11 T 22-04-2016 IPR004879 Domain of unknown function DUF255 SMGD1_RS00275 99b4de32a5cc0dea63a68dfa94c32283 124 SUPERFAMILY SSF52833 20 122 1.02E-24 T 22-04-2016 IPR012336 Thioredoxin-like fold SMGD1_RS08270 507a98f45007faffa93b898f75231fad 261 PANTHER PTHR11060 1 261 7.3E-41 T 22-04-2016 IPR002737 MEMO1 family SMGD1_RS08270 507a98f45007faffa93b898f75231fad 261 TIGRFAM TIGR04336 AmmeMemoSam_B: AmmeMemoRadiSam system protein B 3 260 2.9E-71 T 22-04-2016 IPR002737 MEMO1 family SMGD1_RS08270 507a98f45007faffa93b898f75231fad 261 Pfam PF01875 Memo-like protein 5 258 3.6E-48 T 22-04-2016 IPR002737 MEMO1 family SMGD1_RS08270 507a98f45007faffa93b898f75231fad 261 Hamap MF_00055 MEMO1 family protein . 1 261 45.698 T 22-04-2016 IPR002737 MEMO1 family SMGD1_RS08270 507a98f45007faffa93b898f75231fad 261 PANTHER PTHR11060:SF0 1 261 7.3E-41 T 22-04-2016 SMGD1_RS11300 e3f180cbe8d07f6eacf2742b49e64a8b 581 Gene3D G3DSA:3.40.50.300 404 496 8.0E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS11300 e3f180cbe8d07f6eacf2742b49e64a8b 581 Gene3D G3DSA:3.40.50.300 181 261 8.0E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS11300 e3f180cbe8d07f6eacf2742b49e64a8b 581 SUPERFAMILY SSF52540 382 496 5.09E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS11300 e3f180cbe8d07f6eacf2742b49e64a8b 581 SUPERFAMILY SSF52540 181 210 5.09E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS11300 e3f180cbe8d07f6eacf2742b49e64a8b 581 Pfam PF07728 AAA domain (dynein-related subfamily) 415 489 1.0E-9 T 22-04-2016 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 SMGD1_RS11300 e3f180cbe8d07f6eacf2742b49e64a8b 581 PANTHER PTHR37291:SF1 170 562 7.1E-50 T 22-04-2016 SMGD1_RS11300 e3f180cbe8d07f6eacf2742b49e64a8b 581 PANTHER PTHR37291 170 562 7.1E-50 T 22-04-2016 SMGD1_RS13460 22ce6fea99a1e4836eb871ea769c512f 159 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 153 1.7E-39 T 22-04-2016 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 SMGD1_RS13460 22ce6fea99a1e4836eb871ea769c512f 159 Gene3D G3DSA:3.50.30.40 2 158 8.0E-38 T 22-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein SMGD1_RS13460 22ce6fea99a1e4836eb871ea769c512f 159 Pfam PF03737 Demethylmenaquinone methyltransferase 5 153 4.5E-31 T 22-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein SMGD1_RS13460 22ce6fea99a1e4836eb871ea769c512f 159 PANTHER PTHR33254:SF1 5 158 1.9E-32 T 22-04-2016 SMGD1_RS13460 22ce6fea99a1e4836eb871ea769c512f 159 PANTHER PTHR33254 5 158 1.9E-32 T 22-04-2016 SMGD1_RS13460 22ce6fea99a1e4836eb871ea769c512f 159 SUPERFAMILY SSF89562 1 158 1.05E-32 T 22-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein SMGD1_RS12720 d8d9ea4f77d0de302104cb5dbca4f7cf 603 Pfam PF03961 Protein of unknown function (DUF342) 90 522 1.8E-33 T 22-04-2016 IPR005646 Protein of unknown function DUF342 SMGD1_RS14145 bb23a49228abd86f88f9e7a56da5ec19 292 PANTHER PTHR35810 132 283 1.2E-20 T 22-04-2016 SMGD1_RS14145 bb23a49228abd86f88f9e7a56da5ec19 292 Pfam PF10543 ORF6N domain 14 100 8.2E-34 T 22-04-2016 IPR018873 KilA-N, DNA-binding domain SMGD1_RS14145 bb23a49228abd86f88f9e7a56da5ec19 292 PANTHER PTHR35810:SF2 132 283 1.2E-20 T 22-04-2016 SMGD1_RS02060 b48261e05e61ad2b6edfebdcd00a3ede 286 Gene3D G3DSA:3.30.450.20 42 131 1.5E-5 T 22-04-2016 SMGD1_RS02060 b48261e05e61ad2b6edfebdcd00a3ede 286 SUPERFAMILY SSF103190 31 130 2.12E-5 T 22-04-2016 IPR029151 Periplasmic sensor domain-like SMGD1_RS11375 6bfd8deee48b8ccb0263d6745563c2a3 140 Pfam PF00430 ATP synthase B/B' CF(0) 10 126 1.7E-11 T 22-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 SMGD1_RS02965 2375cb9b92e7c4c93b33f3723edc7b53 246 SUPERFAMILY SSF52540 4 234 1.23E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS02965 2375cb9b92e7c4c93b33f3723edc7b53 246 SMART SM00382 29 219 9.1E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain SMGD1_RS02965 2375cb9b92e7c4c93b33f3723edc7b53 246 Gene3D G3DSA:3.40.50.300 3 234 1.0E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS02965 2375cb9b92e7c4c93b33f3723edc7b53 246 PANTHER PTHR24220:SF483 6 243 3.7E-106 T 22-04-2016 SMGD1_RS02965 2375cb9b92e7c4c93b33f3723edc7b53 246 Pfam PF00005 ABC transporter 21 170 5.3E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMGD1_RS02965 2375cb9b92e7c4c93b33f3723edc7b53 246 PANTHER PTHR24220 6 243 3.7E-106 T 22-04-2016 SMGD1_RS03930 765743bd8da0ba7a7e55366c8ebccf43 307 Gene3D G3DSA:3.40.50.1100 43 144 8.7E-38 T 22-04-2016 SMGD1_RS03930 765743bd8da0ba7a7e55366c8ebccf43 307 PANTHER PTHR10314:SF110 1 307 4.2E-153 T 22-04-2016 SMGD1_RS03930 765743bd8da0ba7a7e55366c8ebccf43 307 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 7 294 2.7E-65 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SMGD1_RS03930 765743bd8da0ba7a7e55366c8ebccf43 307 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 33 51 - T 22-04-2016 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 SMGD1_RS03930 765743bd8da0ba7a7e55366c8ebccf43 307 PANTHER PTHR10314 1 307 4.2E-153 T 22-04-2016 SMGD1_RS03930 765743bd8da0ba7a7e55366c8ebccf43 307 Gene3D G3DSA:3.40.50.1100 150 306 3.1E-73 T 22-04-2016 SMGD1_RS03930 765743bd8da0ba7a7e55366c8ebccf43 307 Gene3D G3DSA:3.40.50.1100 1 42 3.1E-73 T 22-04-2016 SMGD1_RS03930 765743bd8da0ba7a7e55366c8ebccf43 307 TIGRFAM TIGR01136 cysKM: cysteine synthase 7 305 2.1E-127 T 22-04-2016 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 SMGD1_RS03930 765743bd8da0ba7a7e55366c8ebccf43 307 SUPERFAMILY SSF53686 1 305 6.02E-101 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SMGD1_RS03930 765743bd8da0ba7a7e55366c8ebccf43 307 TIGRFAM TIGR01139 cysK: cysteine synthase A 7 305 7.3E-132 T 22-04-2016 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 SMGD1_RS09945 70fa7475933d82de1299d092e5f77603 147 PIRSF PIRSF015875 1 147 5.1E-38 T 22-04-2016 IPR007418 Protein of unknown function DUF474 SMGD1_RS09260 65757f22d946ac9fd20543b9f11f0053 216 SUPERFAMILY SSF103473 5 195 6.8E-5 T 22-04-2016 IPR020846 Major facilitator superfamily domain SMGD1_RS13965 0210b9be71c714ebaf748dd32157307c 173 SUPERFAMILY SSF53474 19 172 5.35E-8 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SMGD1_RS13965 0210b9be71c714ebaf748dd32157307c 173 Gene3D G3DSA:3.40.50.1820 18 172 4.8E-7 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SMGD1_RS01005 b8bfc16674196cb908bb6a9c0f8bb89a 281 SUPERFAMILY SSF102114 5 194 3.4E-28 T 22-04-2016 SMGD1_RS01005 b8bfc16674196cb908bb6a9c0f8bb89a 281 Gene3D G3DSA:3.20.20.70 5 247 1.3E-32 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMGD1_RS01005 b8bfc16674196cb908bb6a9c0f8bb89a 281 Pfam PF13353 4Fe-4S single cluster domain 10 118 2.5E-7 T 22-04-2016 SMGD1_RS01005 b8bfc16674196cb908bb6a9c0f8bb89a 281 PANTHER PTHR21339 4 276 1.0E-39 T 22-04-2016 SMGD1_RS01005 b8bfc16674196cb908bb6a9c0f8bb89a 281 Pfam PF04055 Radical SAM superfamily 12 179 6.7E-12 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SMGD1_RS11720 f10346c9346bea28a4682e035e50bdec 212 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMGD1_RS11720 f10346c9346bea28a4682e035e50bdec 212 SMART SM00382 26 205 4.2E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain SMGD1_RS11720 f10346c9346bea28a4682e035e50bdec 212 Gene3D G3DSA:3.40.50.300 1 210 2.0E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS11720 f10346c9346bea28a4682e035e50bdec 212 Pfam PF00005 ABC transporter 17 158 1.4E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMGD1_RS11720 f10346c9346bea28a4682e035e50bdec 212 PANTHER PTHR24220 3 210 1.7E-57 T 22-04-2016 SMGD1_RS11720 f10346c9346bea28a4682e035e50bdec 212 SUPERFAMILY SSF52540 2 209 7.14E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS04850 8dfb3d819b0ea6501f42453241ff15fa 132 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 129 13.504 T 22-04-2016 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 SMGD1_RS04850 8dfb3d819b0ea6501f42453241ff15fa 132 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 128 1.1E-17 T 22-04-2016 IPR021131 Ribosomal protein L18e/L15P SMGD1_RS04850 8dfb3d819b0ea6501f42453241ff15fa 132 PANTHER PTHR12934 1 122 1.3E-34 T 22-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 SMGD1_RS04850 8dfb3d819b0ea6501f42453241ff15fa 132 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 3 130 2.6E-39 T 22-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 SMGD1_RS04850 8dfb3d819b0ea6501f42453241ff15fa 132 SUPERFAMILY SSF52080 5 130 1.18E-30 T 22-04-2016 IPR021131 Ribosomal protein L18e/L15P SMGD1_RS04850 8dfb3d819b0ea6501f42453241ff15fa 132 Gene3D G3DSA:3.100.10.10 33 98 3.0E-13 T 22-04-2016 SMGD1_RS11180 82dda0d6a4ab02b374354ce539f0fb41 161 Pfam PF07813 LTXXQ motif family protein 55 134 8.4E-6 T 22-04-2016 IPR012899 LTXXQ motif family protein GO:0042597 SMGD1_RS08875 efaf2415575a67da670991f4732ff034 386 Pfam PF13458 Periplasmic binding protein 33 377 1.3E-61 T 22-04-2016 IPR028081 Leucine-binding protein domain SMGD1_RS08875 efaf2415575a67da670991f4732ff034 386 SUPERFAMILY SSF53822 32 382 3.7E-71 T 22-04-2016 IPR028082 Periplasmic binding protein-like I SMGD1_RS08875 efaf2415575a67da670991f4732ff034 386 PANTHER PTHR30483 5 384 3.8E-78 T 22-04-2016 SMGD1_RS08875 efaf2415575a67da670991f4732ff034 386 PANTHER PTHR30483:SF11 5 384 3.8E-78 T 22-04-2016 SMGD1_RS08875 efaf2415575a67da670991f4732ff034 386 Gene3D G3DSA:3.40.50.2300 29 156 9.6E-39 T 22-04-2016 SMGD1_RS08875 efaf2415575a67da670991f4732ff034 386 Gene3D G3DSA:3.40.50.2300 311 365 9.6E-39 T 22-04-2016 SMGD1_RS08875 efaf2415575a67da670991f4732ff034 386 Gene3D G3DSA:3.40.50.2300 157 310 4.3E-16 T 22-04-2016 SMGD1_RS00495 07be5181c4fb07054fa32f1c60109da2 147 Pfam PF14340 Domain of unknown function (DUF4395) 12 140 3.9E-27 T 22-04-2016 IPR025508 Domain of unknown function DUF4395 SMGD1_RS04005 c3bffda532f3545239399e6c142a8fd5 450 PANTHER PTHR10283:SF91 19 440 2.0E-100 T 22-04-2016 SMGD1_RS04005 c3bffda532f3545239399e6c142a8fd5 450 PANTHER PTHR10283 19 440 2.0E-100 T 22-04-2016 SMGD1_RS04005 c3bffda532f3545239399e6c142a8fd5 450 Pfam PF03600 Citrate transporter 37 382 1.0E-37 T 22-04-2016 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 SMGD1_RS04120 6ffc3629ffd0eb3068be65ef247ca2cf 264 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 1 263 6.0E-113 T 22-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 SMGD1_RS04120 6ffc3629ffd0eb3068be65ef247ca2cf 264 PANTHER PTHR21057 1 263 1.4E-126 T 22-04-2016 SMGD1_RS04120 6ffc3629ffd0eb3068be65ef247ca2cf 264 Gene3D G3DSA:3.20.20.70 1 263 2.1E-113 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMGD1_RS04120 6ffc3629ffd0eb3068be65ef247ca2cf 264 PANTHER PTHR21057:SF2 1 263 1.4E-126 T 22-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 SMGD1_RS04120 6ffc3629ffd0eb3068be65ef247ca2cf 264 Pfam PF00793 DAHP synthetase I family 1 261 1.8E-60 T 22-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 SMGD1_RS04120 6ffc3629ffd0eb3068be65ef247ca2cf 264 SUPERFAMILY SSF51569 2 262 5.86E-88 T 22-04-2016 SMGD1_RS01125 117514f152ad0d5fa876c00ece8c8c58 194 Gene3D G3DSA:3.40.50.2300 13 136 5.2E-25 T 22-04-2016 SMGD1_RS01125 117514f152ad0d5fa876c00ece8c8c58 194 SMART SM00448 14 131 7.1E-19 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS01125 117514f152ad0d5fa876c00ece8c8c58 194 Pfam PF00072 Response regulator receiver domain 16 130 2.8E-20 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS01125 117514f152ad0d5fa876c00ece8c8c58 194 PANTHER PTHR24423 30 173 1.7E-21 T 22-04-2016 SMGD1_RS01125 117514f152ad0d5fa876c00ece8c8c58 194 PANTHER PTHR24423:SF374 30 173 1.7E-21 T 22-04-2016 SMGD1_RS01125 117514f152ad0d5fa876c00ece8c8c58 194 SUPERFAMILY SSF52172 12 139 2.56E-24 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS06620 e7f630a4b35bfdcf3115dd7ce4c9a269 291 PRINTS PR00690 Adhesin family signature 48 61 8.5E-5 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 SMGD1_RS06620 e7f630a4b35bfdcf3115dd7ce4c9a269 291 PRINTS PR00690 Adhesin family signature 61 78 8.5E-5 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 SMGD1_RS06620 e7f630a4b35bfdcf3115dd7ce4c9a269 291 PRINTS PR00690 Adhesin family signature 17 35 8.5E-5 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 SMGD1_RS06620 e7f630a4b35bfdcf3115dd7ce4c9a269 291 PRINTS PR00690 Adhesin family signature 184 205 8.5E-5 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 SMGD1_RS06620 e7f630a4b35bfdcf3115dd7ce4c9a269 291 Pfam PF01297 Zinc-uptake complex component A periplasmic 20 275 8.8E-39 T 22-04-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 SMGD1_RS06620 e7f630a4b35bfdcf3115dd7ce4c9a269 291 PANTHER PTHR30477:SF11 15 270 1.4E-68 T 22-04-2016 SMGD1_RS06620 e7f630a4b35bfdcf3115dd7ce4c9a269 291 Gene3D G3DSA:3.40.50.1980 186 277 8.8E-11 T 22-04-2016 SMGD1_RS06620 e7f630a4b35bfdcf3115dd7ce4c9a269 291 SUPERFAMILY SSF53807 9 290 5.89E-62 T 22-04-2016 SMGD1_RS06620 e7f630a4b35bfdcf3115dd7ce4c9a269 291 PANTHER PTHR30477 15 270 1.4E-68 T 22-04-2016 SMGD1_RS06620 e7f630a4b35bfdcf3115dd7ce4c9a269 291 Gene3D G3DSA:3.40.50.1980 18 185 3.3E-32 T 22-04-2016 SMGD1_RS13915 a8d521bb749df579560bb50ce775b487 272 PANTHER PTHR10067 8 270 1.4E-68 T 22-04-2016 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 SMGD1_RS13915 a8d521bb749df579560bb50ce775b487 272 Pfam PF02666 Phosphatidylserine decarboxylase 53 269 2.3E-54 T 22-04-2016 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 SMGD1_RS13915 a8d521bb749df579560bb50ce775b487 272 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 49 269 2.7E-63 T 22-04-2016 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 SMGD1_RS09660 bd7cd2cbc060411e9c4e0a8c5167cc13 100 ProDom PD351196 CJ1463 JHP0230 HP0245 26 99 3.0E-14 T 22-04-2016 SMGD1_RS09660 bd7cd2cbc060411e9c4e0a8c5167cc13 100 Pfam PF10135 Rod binding protein 48 94 1.5E-7 T 22-04-2016 IPR019301 Flagellar protein FlgJ, N-terminal SMGD1_RS07050 a2517ca1d62e46c6c692e451cc17100a 378 SUPERFAMILY SSF51004 32 373 3.66E-35 T 22-04-2016 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain SMGD1_RS07050 a2517ca1d62e46c6c692e451cc17100a 378 Gene3D G3DSA:2.130.10.10 33 186 1.3E-21 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 SMGD1_RS07050 a2517ca1d62e46c6c692e451cc17100a 378 Gene3D G3DSA:2.130.10.10 241 373 1.3E-21 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 SMGD1_RS07050 a2517ca1d62e46c6c692e451cc17100a 378 Pfam PF02239 Cytochrome D1 heme domain 38 373 7.7E-23 T 22-04-2016 SMGD1_RS08795 f71ceb588bad93b8c606c82910aa3d04 269 Gene3D G3DSA:2.40.160.20 206 237 9.3E-6 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 SMGD1_RS08795 f71ceb588bad93b8c606c82910aa3d04 269 Gene3D G3DSA:2.40.160.20 55 157 9.3E-6 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 SMGD1_RS08795 f71ceb588bad93b8c606c82910aa3d04 269 SUPERFAMILY SSF56935 165 237 4.35E-5 T 22-04-2016 SMGD1_RS08795 f71ceb588bad93b8c606c82910aa3d04 269 SUPERFAMILY SSF56935 15 138 4.35E-5 T 22-04-2016 SMGD1_RS08795 f71ceb588bad93b8c606c82910aa3d04 269 Pfam PF13505 Outer membrane protein beta-barrel domain 7 248 6.3E-8 T 22-04-2016 IPR027385 Outer membrane protein beta-barrel SMGD1_RS04100 46d1dcfacdafc8cb4d1365c8d69a7ccd 147 SUPERFAMILY SSF103247 18 137 1.44E-24 T 22-04-2016 IPR005180 Domain of unknown function DUF302 SMGD1_RS04100 46d1dcfacdafc8cb4d1365c8d69a7ccd 147 Gene3D G3DSA:3.30.310.70 18 138 7.7E-24 T 22-04-2016 IPR005180 Domain of unknown function DUF302 SMGD1_RS04100 46d1dcfacdafc8cb4d1365c8d69a7ccd 147 Pfam PF03625 Domain of unknown function DUF302 50 111 7.0E-14 T 22-04-2016 IPR005180 Domain of unknown function DUF302 SMGD1_RS14350 49a3797b920ebae7d63873063a3251b5 474 Pfam PF12801 4Fe-4S binding domain 60 103 3.4E-9 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SMGD1_RS14350 49a3797b920ebae7d63873063a3251b5 474 Pfam PF12801 4Fe-4S binding domain 141 179 0.0015 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SMGD1_RS14350 49a3797b920ebae7d63873063a3251b5 474 SUPERFAMILY SSF54862 120 232 1.83E-8 T 22-04-2016 SMGD1_RS14350 49a3797b920ebae7d63873063a3251b5 474 Gene3D G3DSA:3.30.70.20 161 239 3.3E-6 T 22-04-2016 SMGD1_RS08395 1596167e3d2d1dac223f17c1516e0db8 129 PANTHER PTHR11058:SF5 1 129 1.7E-34 T 22-04-2016 SMGD1_RS08395 1596167e3d2d1dac223f17c1516e0db8 129 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 6 126 16.72 T 22-04-2016 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 SMGD1_RS08395 1596167e3d2d1dac223f17c1516e0db8 129 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 31 125 1.1E-32 T 22-04-2016 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 SMGD1_RS08395 1596167e3d2d1dac223f17c1516e0db8 129 PANTHER PTHR11058 1 129 1.7E-34 T 22-04-2016 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 SMGD1_RS08390 1c951c6b871f9d9d087e64e7441af1a7 408 Pfam PF02666 Phosphatidylserine decarboxylase 193 405 4.6E-49 T 22-04-2016 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 SMGD1_RS08390 1c951c6b871f9d9d087e64e7441af1a7 408 Pfam PF12588 Phophatidylserine decarboxylase 42 174 4.6E-39 T 22-04-2016 IPR022237 Phophatidylserine decarboxylase SMGD1_RS08390 1c951c6b871f9d9d087e64e7441af1a7 408 PANTHER PTHR10067:SF4 29 405 1.9E-86 T 22-04-2016 SMGD1_RS08390 1c951c6b871f9d9d087e64e7441af1a7 408 PANTHER PTHR10067 29 405 1.9E-86 T 22-04-2016 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 SMGD1_RS04310 704caecc421b105b6e1ec39d5d0d0627 354 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 130 235 4.3E-7 T 22-04-2016 IPR000014 PAS domain SMGD1_RS04310 704caecc421b105b6e1ec39d5d0d0627 354 Pfam PF13426 PAS domain 131 230 1.8E-4 T 22-04-2016 IPR000014 PAS domain SMGD1_RS04310 704caecc421b105b6e1ec39d5d0d0627 354 SMART SM00091 119 185 4.1E-5 T 22-04-2016 IPR000014 PAS domain SMGD1_RS04310 704caecc421b105b6e1ec39d5d0d0627 354 SMART SM00091 5 76 36.0 T 22-04-2016 IPR000014 PAS domain SMGD1_RS04310 704caecc421b105b6e1ec39d5d0d0627 354 Gene3D G3DSA:3.30.450.20 122 230 1.8E-11 T 22-04-2016 SMGD1_RS04310 704caecc421b105b6e1ec39d5d0d0627 354 SUPERFAMILY SSF55785 125 230 8.2E-12 T 22-04-2016 IPR000014 PAS domain SMGD1_RS07730 da9b1d4e5cbd4ed9802b7ac9e0376ce7 154 Pfam PF06271 RDD family 23 146 6.5E-19 T 22-04-2016 IPR010432 RDD SMGD1_RS02620 d51e10264efe19bbc1038beedd5e0645 263 Gene3D G3DSA:3.30.470.30 43 138 4.4E-4 T 22-04-2016 SMGD1_RS02620 d51e10264efe19bbc1038beedd5e0645 263 PANTHER PTHR10459 33 259 8.5E-58 T 22-04-2016 SMGD1_RS02620 d51e10264efe19bbc1038beedd5e0645 263 Gene3D G3DSA:3.30.1490.70 33 42 3.1E-10 T 22-04-2016 SMGD1_RS02620 d51e10264efe19bbc1038beedd5e0645 263 Gene3D G3DSA:3.30.1490.70 139 166 3.1E-10 T 22-04-2016 SMGD1_RS02620 d51e10264efe19bbc1038beedd5e0645 263 SUPERFAMILY SSF50249 156 262 1.71E-26 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMGD1_RS02620 d51e10264efe19bbc1038beedd5e0645 263 Gene3D G3DSA:2.40.50.140 167 262 4.0E-35 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMGD1_RS02620 d51e10264efe19bbc1038beedd5e0645 263 Pfam PF14743 DNA ligase OB-like domain 197 262 5.6E-28 T 22-04-2016 IPR029319 DNA ligase, OB-like domain SMGD1_RS02620 d51e10264efe19bbc1038beedd5e0645 263 SUPERFAMILY SSF56091 20 183 2.64E-32 T 22-04-2016 SMGD1_RS02620 d51e10264efe19bbc1038beedd5e0645 263 Pfam PF01068 ATP dependent DNA ligase domain 34 183 6.3E-7 T 22-04-2016 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 Reactome: REACT_216 SMGD1_RS02620 d51e10264efe19bbc1038beedd5e0645 263 PANTHER PTHR10459:SF68 33 259 8.5E-58 T 22-04-2016 SMGD1_RS01705 adedba6c698235093775161daff3c20e 268 Pfam PF04403 Paraquat-inducible protein A 120 261 1.1E-14 T 22-04-2016 IPR007498 Paraquat-inducible protein A SMGD1_RS04165 b9a91e5262e70dc89292fe3f1246ed7b 174 PANTHER PTHR40255 5 170 4.5E-30 T 22-04-2016 SMGD1_RS04165 b9a91e5262e70dc89292fe3f1246ed7b 174 PIRSF PIRSF004638 1 149 3.9E-43 T 22-04-2016 IPR005265 Uncharacterised protein family UPF0093 SMGD1_RS04165 b9a91e5262e70dc89292fe3f1246ed7b 174 Pfam PF03653 Uncharacterised protein family (UPF0093) 4 147 2.6E-47 T 22-04-2016 IPR005265 Uncharacterised protein family UPF0093 SMGD1_RS04165 b9a91e5262e70dc89292fe3f1246ed7b 174 TIGRFAM TIGR00701 TIGR00701: TIGR00701 family protein 6 147 2.3E-41 T 22-04-2016 IPR014351 Conserved hypothetical protein CHP00701 SMGD1_RS06155 d54f179121ddd5a8792a7993fbca6d9d 707 Gene3D G3DSA:2.130.10.10 25 308 7.5E-24 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 SMGD1_RS06155 d54f179121ddd5a8792a7993fbca6d9d 707 SUPERFAMILY SSF50978 46 313 1.69E-28 T 22-04-2016 IPR017986 WD40-repeat-containing domain GO:0005515 SMGD1_RS09955 97d991ed2e63640e344b5c11931dc5ed 153 SUPERFAMILY SSF51206 6 143 1.44E-16 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like SMGD1_RS09955 97d991ed2e63640e344b5c11931dc5ed 153 Gene3D G3DSA:2.60.120.10 3 128 5.5E-14 T 22-04-2016 IPR014710 RmlC-like jelly roll fold SMGD1_RS13090 3371182513f6c1ee872a08087308a167 240 Pfam PF00005 ABC transporter 20 165 1.9E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMGD1_RS13090 3371182513f6c1ee872a08087308a167 240 PANTHER PTHR24220:SF497 5 236 6.1E-120 T 22-04-2016 SMGD1_RS13090 3371182513f6c1ee872a08087308a167 240 SUPERFAMILY SSF52540 4 235 2.48E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS13090 3371182513f6c1ee872a08087308a167 240 SMART SM00382 28 212 1.5E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain SMGD1_RS13090 3371182513f6c1ee872a08087308a167 240 Gene3D G3DSA:3.40.50.300 4 228 1.3E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS13090 3371182513f6c1ee872a08087308a167 240 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 3 240 1.2E-101 T 22-04-2016 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 SMGD1_RS13090 3371182513f6c1ee872a08087308a167 240 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMGD1_RS13090 3371182513f6c1ee872a08087308a167 240 PANTHER PTHR24220 5 236 6.1E-120 T 22-04-2016 SMGD1_RS06950 926e8c6c2f03b255d7e1aa81784fce25 228 Gene3D G3DSA:3.90.550.10 4 200 1.5E-10 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMGD1_RS06950 926e8c6c2f03b255d7e1aa81784fce25 228 SUPERFAMILY SSF53448 3 221 1.92E-25 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMGD1_RS06950 926e8c6c2f03b255d7e1aa81784fce25 228 Pfam PF00535 Glycosyl transferase family 2 4 153 2.1E-18 T 22-04-2016 IPR001173 Glycosyltransferase 2-like SMGD1_RS06950 926e8c6c2f03b255d7e1aa81784fce25 228 PANTHER PTHR10859 4 217 1.8E-40 T 22-04-2016 SMGD1_RS06950 926e8c6c2f03b255d7e1aa81784fce25 228 PANTHER PTHR10859:SF84 4 217 1.8E-40 T 22-04-2016 SMGD1_RS11970 a56eb8e143c651b4fdee2470966d5500 221 Pfam PF05036 Sporulation related domain 146 217 2.3E-11 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 SMGD1_RS11970 a56eb8e143c651b4fdee2470966d5500 221 SUPERFAMILY SSF110997 146 217 3.4E-10 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 SMGD1_RS11970 a56eb8e143c651b4fdee2470966d5500 221 Gene3D G3DSA:3.30.70.1070 141 219 9.9E-10 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 SMGD1_RS02960 3cdf4cea5c685a7d6e4a5d578715ecf8 300 PANTHER PTHR36698:SF2 1 283 3.8E-35 T 22-04-2016 SMGD1_RS02960 3cdf4cea5c685a7d6e4a5d578715ecf8 300 PANTHER PTHR36698 1 283 3.8E-35 T 22-04-2016 SMGD1_RS02960 3cdf4cea5c685a7d6e4a5d578715ecf8 300 Pfam PF02470 MlaD protein 17 94 5.7E-13 T 22-04-2016 IPR003399 Mce/MlaD SMGD1_RS01695 e2a4f97c32314ea3ed86c9461c84e73f 320 Pfam PF11335 Protein of unknown function (DUF3137) 166 312 3.4E-41 T 22-04-2016 IPR021484 Protein of unknown function DUF3137 SMGD1_RS04665 fb0c4ef4da7e00810f51bb24c587be26 405 PANTHER PTHR11732 1 128 8.5E-22 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta SMGD1_RS04665 fb0c4ef4da7e00810f51bb24c587be26 405 PANTHER PTHR11732 153 175 8.5E-22 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta SMGD1_RS04665 fb0c4ef4da7e00810f51bb24c587be26 405 SUPERFAMILY SSF51430 1 261 8.78E-31 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain SMGD1_RS04665 fb0c4ef4da7e00810f51bb24c587be26 405 SUPERFAMILY SSF51430 354 403 8.78E-31 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain SMGD1_RS04665 fb0c4ef4da7e00810f51bb24c587be26 405 Pfam PF00248 Aldo/keto reductase family 6 402 9.2E-22 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain SMGD1_RS04665 fb0c4ef4da7e00810f51bb24c587be26 405 Gene3D G3DSA:3.20.20.100 1 276 3.9E-40 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain SMGD1_RS04665 fb0c4ef4da7e00810f51bb24c587be26 405 Gene3D G3DSA:3.20.20.100 359 402 3.9E-40 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain SMGD1_RS14300 777a4c5ddd7785c983130bb8b2dbd25b 159 Pfam PF01592 NifU-like N terminal domain 18 132 4.6E-13 T 22-04-2016 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 SMGD1_RS14300 777a4c5ddd7785c983130bb8b2dbd25b 159 SUPERFAMILY SSF82649 19 136 2.07E-16 T 22-04-2016 SMGD1_RS14300 777a4c5ddd7785c983130bb8b2dbd25b 159 Gene3D G3DSA:3.90.1010.10 19 135 2.7E-11 T 22-04-2016 SMGD1_RS05485 d6f03f15d386e19da9b51e5373b1c901 310 Pfam PF04773 FecR protein 153 212 2.4E-4 T 22-04-2016 IPR006860 FecR protein SMGD1_RS05485 d6f03f15d386e19da9b51e5373b1c901 310 Pfam PF04773 FecR protein 241 280 8.1E-5 T 22-04-2016 IPR006860 FecR protein SMGD1_RS02110 1daa7dbb6210cb8552d2960b2a688af3 311 Pfam PF13487 HD domain 199 262 5.4E-17 T 22-04-2016 SMGD1_RS02110 1daa7dbb6210cb8552d2960b2a688af3 311 SUPERFAMILY SSF109604 139 309 1.47E-30 T 22-04-2016 SMGD1_RS02110 1daa7dbb6210cb8552d2960b2a688af3 311 SMART SM00471 144 280 2.9E-11 T 22-04-2016 IPR003607 HD/PDEase domain SMGD1_RS02110 1daa7dbb6210cb8552d2960b2a688af3 311 Gene3D G3DSA:1.10.3210.10 146 298 5.2E-20 T 22-04-2016 IPR006674 HD domain SMGD1_RS02900 ed5e36be29b6a62c26a786273467d7c8 336 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 31 124 4.4E-17 T 22-04-2016 IPR029095 NarX-like, N-terminal SMGD1_RS08095 7c3fc7b864348b8dec3fcaf04bc9f49f 92 Pfam PF00226 DnaJ domain 11 59 1.4E-11 T 22-04-2016 IPR001623 DnaJ domain SMGD1_RS08095 7c3fc7b864348b8dec3fcaf04bc9f49f 92 SMART SM00271 7 62 2.6E-10 T 22-04-2016 IPR001623 DnaJ domain SMGD1_RS08095 7c3fc7b864348b8dec3fcaf04bc9f49f 92 Gene3D G3DSA:1.10.287.110 5 65 8.3E-14 T 22-04-2016 IPR001623 DnaJ domain SMGD1_RS08095 7c3fc7b864348b8dec3fcaf04bc9f49f 92 SUPERFAMILY SSF46565 6 86 5.23E-14 T 22-04-2016 IPR001623 DnaJ domain SMGD1_RS08065 c6e59faba5240cae14870c5f4d3889bf 543 PANTHER PTHR11101 503 541 1.6E-119 T 22-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 SMGD1_RS08065 c6e59faba5240cae14870c5f4d3889bf 543 PANTHER PTHR11101 40 428 1.6E-119 T 22-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 SMGD1_RS08065 c6e59faba5240cae14870c5f4d3889bf 543 Pfam PF01384 Phosphate transporter family 65 531 1.1E-114 T 22-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 SMGD1_RS09785 a01ae2b150b8b2b88e67c73b09631aa8 382 Pfam PF01266 FAD dependent oxidoreductase 3 353 2.5E-28 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 SMGD1_RS09785 a01ae2b150b8b2b88e67c73b09631aa8 382 SUPERFAMILY SSF51905 1 215 6.09E-21 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS09785 a01ae2b150b8b2b88e67c73b09631aa8 382 PANTHER PTHR13847 2 305 4.6E-18 T 22-04-2016 SMGD1_RS09785 a01ae2b150b8b2b88e67c73b09631aa8 382 PANTHER PTHR13847 328 360 4.6E-18 T 22-04-2016 SMGD1_RS09785 a01ae2b150b8b2b88e67c73b09631aa8 382 Gene3D G3DSA:3.50.50.60 321 361 1.5E-22 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS09785 a01ae2b150b8b2b88e67c73b09631aa8 382 Gene3D G3DSA:3.50.50.60 124 195 1.5E-22 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS09785 a01ae2b150b8b2b88e67c73b09631aa8 382 Gene3D G3DSA:3.50.50.60 1 79 1.5E-22 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMGD1_RS10460 d27fde78be5563c95687412b115a95b8 151 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 2 148 28.366 T 22-04-2016 IPR003791 Protein of unknown function UPF0178 SMGD1_RS10460 d27fde78be5563c95687412b115a95b8 151 PANTHER PTHR35146 1 148 2.7E-40 T 22-04-2016 SMGD1_RS10460 d27fde78be5563c95687412b115a95b8 151 PANTHER PTHR35146:SF1 1 148 2.7E-40 T 22-04-2016 SMGD1_RS10460 d27fde78be5563c95687412b115a95b8 151 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 19 146 8.5E-47 T 22-04-2016 IPR003791 Protein of unknown function UPF0178 SMGD1_RS11975 a92ffb9d4d376d0f9c38ffc02426c0af 180 Gene3D G3DSA:3.90.920.20 1 180 8.2E-94 T 22-04-2016 SMGD1_RS11975 a92ffb9d4d376d0f9c38ffc02426c0af 180 SUPERFAMILY SSF56747 4 178 1.96E-90 T 22-04-2016 SMGD1_RS11975 a92ffb9d4d376d0f9c38ffc02426c0af 180 Pfam PF08966 Domain of unknown function (DUF1882) 1 73 6.4E-37 T 22-04-2016 IPR015061 Domain of unknown function DUF1882 SMGD1_RS08460 9e4ada0d0b6089c17537fa32001f7f6d 640 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 84 104 2.5E-12 T 22-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 SMGD1_RS08460 9e4ada0d0b6089c17537fa32001f7f6d 640 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 413 435 2.5E-12 T 22-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 SMGD1_RS08460 9e4ada0d0b6089c17537fa32001f7f6d 640 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 262 284 2.5E-12 T 22-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 SMGD1_RS08460 9e4ada0d0b6089c17537fa32001f7f6d 640 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 58 82 2.5E-12 T 22-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 SMGD1_RS08460 9e4ada0d0b6089c17537fa32001f7f6d 640 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 110 130 4.7E-61 T 22-04-2016 SMGD1_RS08460 9e4ada0d0b6089c17537fa32001f7f6d 640 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 414 433 4.7E-61 T 22-04-2016 SMGD1_RS08460 9e4ada0d0b6089c17537fa32001f7f6d 640 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 312 324 4.7E-61 T 22-04-2016 SMGD1_RS08460 9e4ada0d0b6089c17537fa32001f7f6d 640 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 82 107 4.7E-61 T 22-04-2016 SMGD1_RS08460 9e4ada0d0b6089c17537fa32001f7f6d 640 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 222 243 4.7E-61 T 22-04-2016 SMGD1_RS08460 9e4ada0d0b6089c17537fa32001f7f6d 640 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 157 178 4.7E-61 T 22-04-2016 SMGD1_RS08460 9e4ada0d0b6089c17537fa32001f7f6d 640 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 244 270 4.7E-61 T 22-04-2016 SMGD1_RS08460 9e4ada0d0b6089c17537fa32001f7f6d 640 Pfam PF00361 Proton-conducting membrane transporter 133 421 2.2E-77 T 22-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 SMGD1_RS08460 9e4ada0d0b6089c17537fa32001f7f6d 640 PANTHER PTHR22773:SF50 1 572 7.8E-216 T 22-04-2016 SMGD1_RS08460 9e4ada0d0b6089c17537fa32001f7f6d 640 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 5 618 4.2E-218 T 22-04-2016 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 SMGD1_RS08460 9e4ada0d0b6089c17537fa32001f7f6d 640 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 65 121 3.8E-22 T 22-04-2016 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal SMGD1_RS08460 9e4ada0d0b6089c17537fa32001f7f6d 640 PANTHER PTHR22773 1 572 7.8E-216 T 22-04-2016 SMGD1_RS13595 a227a0c387c9ea2171be7a3fa95dc4c5 480 Pfam PF06980 Protein of unknown function (DUF1302) 110 199 1.8E-6 T 22-04-2016 IPR010727 Protein of unknown function DUF1302 SMGD1_RS00220 f3b5d62d59c42f0c857905b0e6057802 167 Pfam PF07603 Protein of unknown function (DUF1566) 49 162 1.3E-24 T 22-04-2016 IPR011460 Protein of unknown function DUF1566 SMGD1_RS11910 9fcc6b12c15e1f74249d75d6c6c924e8 115 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 59 94 0.004 T 22-04-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 SMGD1_RS11910 9fcc6b12c15e1f74249d75d6c6c924e8 115 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 5 110 1.9E-10 T 22-04-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 SMGD1_RS11910 9fcc6b12c15e1f74249d75d6c6c924e8 115 SUPERFAMILY SSF143243 2 110 4.05E-13 T 22-04-2016 SMGD1_RS14240 2516c3530017f14320b38a07781b918c 353 PANTHER PTHR16222 7 349 1.6E-15 T 22-04-2016 SMGD1_RS14240 2516c3530017f14320b38a07781b918c 353 Pfam PF03747 ADP-ribosylglycohydrolase 12 330 1.1E-38 T 22-04-2016 IPR005502 ADP-ribosylation/Crystallin J1 SMGD1_RS14240 2516c3530017f14320b38a07781b918c 353 SUPERFAMILY SSF101478 6 349 6.28E-34 T 22-04-2016 IPR005502 ADP-ribosylation/Crystallin J1 SMGD1_RS05100 4347a17ff63b05bf84a58e7d34fdbae6 658 PANTHER PTHR32089 276 658 5.1E-64 T 22-04-2016 SMGD1_RS05100 4347a17ff63b05bf84a58e7d34fdbae6 658 SMART SM00283 389 643 1.9E-37 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SMGD1_RS05100 4347a17ff63b05bf84a58e7d34fdbae6 658 SUPERFAMILY SSF58104 349 658 2.62E-56 T 22-04-2016 SMGD1_RS05100 4347a17ff63b05bf84a58e7d34fdbae6 658 Gene3D G3DSA:1.10.287.950 414 618 2.8E-46 T 22-04-2016 SMGD1_RS05100 4347a17ff63b05bf84a58e7d34fdbae6 658 Pfam PF08376 Nitrate and nitrite sensing 52 289 1.3E-47 T 22-04-2016 IPR013587 Nitrate/nitrite sensing protein SMGD1_RS05100 4347a17ff63b05bf84a58e7d34fdbae6 658 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 462 656 2.8E-38 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SMGD1_RS08490 c7613616886dc3f5c7e8d3c9ef413557 286 Pfam PF01040 UbiA prenyltransferase family 24 265 4.0E-47 T 22-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 SMGD1_RS08490 c7613616886dc3f5c7e8d3c9ef413557 286 TIGRFAM TIGR01475 ubiA_other: putative 4-hydroxybenzoate polyprenyltransferase 7 284 4.6E-94 T 22-04-2016 IPR006371 4-hydroxybenzoate polyprenyltransferase-related SMGD1_RS08490 c7613616886dc3f5c7e8d3c9ef413557 286 PANTHER PTHR11048 1 284 2.4E-46 T 22-04-2016 SMGD1_RS08490 c7613616886dc3f5c7e8d3c9ef413557 286 PANTHER PTHR11048:SF7 1 284 2.4E-46 T 22-04-2016 SMGD1_RS02820 4ffc6d938ca9e01169e46a6aed2094fb 67 Gene3D G3DSA:3.10.290.10 2 66 1.2E-23 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SMGD1_RS02820 4ffc6d938ca9e01169e46a6aed2094fb 67 PANTHER PTHR32319 4 61 1.2E-17 T 22-04-2016 SMGD1_RS02820 4ffc6d938ca9e01169e46a6aed2094fb 67 SUPERFAMILY SSF55174 2 65 1.57E-16 T 22-04-2016 SMGD1_RS02820 4ffc6d938ca9e01169e46a6aed2094fb 67 Pfam PF13275 S4 domain 3 66 9.7E-23 T 22-04-2016 SMGD1_RS07000 dc6df00d810eb883ae6dfd14db9ce441 85 SUPERFAMILY SSF47336 8 84 4.45E-12 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain SMGD1_RS07000 dc6df00d810eb883ae6dfd14db9ce441 85 Gene3D G3DSA:1.10.1200.10 5 83 1.1E-14 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain SMGD1_RS07000 dc6df00d810eb883ae6dfd14db9ce441 85 Pfam PF00550 Phosphopantetheine attachment site 19 62 1.5E-8 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain SMGD1_RS12245 687ab526d09845e9ab50ef182b206e11 236 PANTHER PTHR42208:SF1 1 227 2.4E-31 T 22-04-2016 SMGD1_RS12245 687ab526d09845e9ab50ef182b206e11 236 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 9 215 1.5E-48 T 22-04-2016 SMGD1_RS12245 687ab526d09845e9ab50ef182b206e11 236 PANTHER PTHR42208 1 227 2.4E-31 T 22-04-2016 SMGD1_RS11230 28a3271c69d01650d504e3ca54bc2c9c 419 Pfam PF00374 Nickel-dependent hydrogenase 125 419 4.4E-21 T 22-04-2016 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 SMGD1_RS11230 28a3271c69d01650d504e3ca54bc2c9c 419 Pfam PF00374 Nickel-dependent hydrogenase 34 105 2.2E-15 T 22-04-2016 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 SMGD1_RS11230 28a3271c69d01650d504e3ca54bc2c9c 419 Gene3D G3DSA:1.10.645.10 2 419 2.9E-76 T 22-04-2016 IPR029014 NiFe hydrogenase-like SMGD1_RS11230 28a3271c69d01650d504e3ca54bc2c9c 419 SUPERFAMILY SSF56762 7 419 6.15E-75 T 22-04-2016 IPR029014 NiFe hydrogenase-like SMGD1_RS11230 28a3271c69d01650d504e3ca54bc2c9c 419 PANTHER PTHR11993 4 174 6.6E-76 T 22-04-2016 SMGD1_RS11230 28a3271c69d01650d504e3ca54bc2c9c 419 PANTHER PTHR11993 246 419 6.6E-76 T 22-04-2016 SMGD1_RS11230 28a3271c69d01650d504e3ca54bc2c9c 419 PANTHER PTHR11993:SF26 4 174 6.6E-76 T 22-04-2016 SMGD1_RS11230 28a3271c69d01650d504e3ca54bc2c9c 419 PANTHER PTHR11993:SF26 246 419 6.6E-76 T 22-04-2016 SMGD1_RS02530 9985666575164f6ca5a20c57b02df327 319 Gene3D G3DSA:3.40.50.720 7 191 2.8E-20 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS02530 9985666575164f6ca5a20c57b02df327 319 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 6 133 3.7E-10 T 22-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 SMGD1_RS02530 9985666575164f6ca5a20c57b02df327 319 SUPERFAMILY SSF51735 26 181 8.76E-21 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS05430 fbcb02e78b4e0a944630edbd6eebca45 125 SMART SM00448 6 119 6.2E-17 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS05430 fbcb02e78b4e0a944630edbd6eebca45 125 SUPERFAMILY SSF52172 4 118 1.24E-26 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS05430 fbcb02e78b4e0a944630edbd6eebca45 125 Pfam PF00072 Response regulator receiver domain 8 117 2.6E-21 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS05430 fbcb02e78b4e0a944630edbd6eebca45 125 Gene3D G3DSA:3.40.50.2300 5 118 2.9E-28 T 22-04-2016 SMGD1_RS05430 fbcb02e78b4e0a944630edbd6eebca45 125 PANTHER PTHR26402:SF547 6 121 1.6E-23 T 22-04-2016 SMGD1_RS05430 fbcb02e78b4e0a944630edbd6eebca45 125 PANTHER PTHR26402 6 121 1.6E-23 T 22-04-2016 SMGD1_RS13670 c82d4096965423ed34c32df1c35da1fb 82 SUPERFAMILY SSF48452 5 44 2.56E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS13670 c82d4096965423ed34c32df1c35da1fb 82 Gene3D G3DSA:1.25.40.10 5 48 2.7E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS03245 fd19caf48ae3951c3267eb409901ede3 265 Pfam PF08668 HDOD domain 15 203 7.9E-7 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD SMGD1_RS03245 fd19caf48ae3951c3267eb409901ede3 265 SUPERFAMILY SSF109604 6 255 6.28E-16 T 22-04-2016 SMGD1_RS03245 fd19caf48ae3951c3267eb409901ede3 265 Gene3D G3DSA:1.10.3150.10 6 226 1.0E-18 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD SMGD1_RS12450 02f2142776fc51b7f3458ae40e35074d 458 Pfam PF03573 outer membrane porin, OprD family 30 457 1.4E-11 T 22-04-2016 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 SMGD1_RS12450 02f2142776fc51b7f3458ae40e35074d 458 Gene3D G3DSA:2.40.160.10 30 458 5.6E-56 T 22-04-2016 IPR023614 Porin domain SMGD1_RS04055 77bbec794d3e5cc4fe926bc18df18080 126 Gene3D G3DSA:2.30.290.10 3 120 1.1E-32 T 22-04-2016 IPR024046 Flagellar assembly factor FliW domain SMGD1_RS04055 77bbec794d3e5cc4fe926bc18df18080 126 Pfam PF02623 FliW protein 6 118 8.9E-29 T 22-04-2016 IPR003775 Flagellar assembly factor FliW GO:0044780 SMGD1_RS04055 77bbec794d3e5cc4fe926bc18df18080 126 Hamap MF_01185 Flagellar assembly factor FliW [fliW]. 1 119 19.05 T 22-04-2016 IPR003775 Flagellar assembly factor FliW GO:0044780 SMGD1_RS04055 77bbec794d3e5cc4fe926bc18df18080 126 SUPERFAMILY SSF141457 7 112 6.28E-30 T 22-04-2016 IPR024046 Flagellar assembly factor FliW domain SMGD1_RS12205 0844dcedfafd698859db339176d22800 152 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 110 150 1.3E-6 T 22-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 SMGD1_RS12205 0844dcedfafd698859db339176d22800 152 SUPERFAMILY SSF53927 78 150 3.37E-15 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 SMGD1_RS12205 0844dcedfafd698859db339176d22800 152 Gene3D G3DSA:3.40.140.10 78 150 6.7E-15 T 22-04-2016 SMGD1_RS14205 409810b8afb016be03252f8badc965d9 283 SUPERFAMILY SSF141523 206 237 1.7E-6 T 22-04-2016 SMGD1_RS14205 409810b8afb016be03252f8badc965d9 283 SUPERFAMILY SSF141523 88 154 1.7E-6 T 22-04-2016 SMGD1_RS14205 409810b8afb016be03252f8badc965d9 283 Pfam PF03734 L,D-transpeptidase catalytic domain 92 235 1.8E-7 T 22-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 SMGD1_RS14205 409810b8afb016be03252f8badc965d9 283 Gene3D G3DSA:2.40.440.10 190 234 6.1E-6 T 22-04-2016 SMGD1_RS14205 409810b8afb016be03252f8badc965d9 283 Gene3D G3DSA:2.40.440.10 122 150 6.1E-6 T 22-04-2016 SMGD1_RS13210 d21cf698518bafb5cff3c609e7eccb03 163 PANTHER PTHR21342 1 154 1.3E-66 T 22-04-2016 SMGD1_RS13210 d21cf698518bafb5cff3c609e7eccb03 163 SUPERFAMILY SSF52374 2 155 8.85E-45 T 22-04-2016 SMGD1_RS13210 d21cf698518bafb5cff3c609e7eccb03 163 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 86 102 6.9E-47 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 SMGD1_RS13210 d21cf698518bafb5cff3c609e7eccb03 163 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 3 21 6.9E-47 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 SMGD1_RS13210 d21cf698518bafb5cff3c609e7eccb03 163 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 21 42 6.9E-47 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 SMGD1_RS13210 d21cf698518bafb5cff3c609e7eccb03 163 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 113 135 6.9E-47 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 SMGD1_RS13210 d21cf698518bafb5cff3c609e7eccb03 163 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 50 74 6.9E-47 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 SMGD1_RS13210 d21cf698518bafb5cff3c609e7eccb03 163 Pfam PF01467 Cytidylyltransferase-like 6 134 2.1E-22 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 SMGD1_RS13210 d21cf698518bafb5cff3c609e7eccb03 163 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 3 159 33.069 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 SMGD1_RS13210 d21cf698518bafb5cff3c609e7eccb03 163 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 4 154 3.2E-57 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 SMGD1_RS13210 d21cf698518bafb5cff3c609e7eccb03 163 PANTHER PTHR21342:SF1 1 154 1.3E-66 T 22-04-2016 SMGD1_RS13210 d21cf698518bafb5cff3c609e7eccb03 163 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 12 78 0.004 T 22-04-2016 SMGD1_RS13210 d21cf698518bafb5cff3c609e7eccb03 163 Gene3D G3DSA:3.40.50.620 2 154 3.1E-53 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMGD1_RS13210 d21cf698518bafb5cff3c609e7eccb03 163 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 4 63 1.3E-18 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 SMGD1_RS06385 23b0e35f3d4d59ecb8749bdf33d7b433 376 Pfam PF13435 Cytochrome c554 and c-prime 24 103 4.8E-8 T 22-04-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 SMGD1_RS06385 23b0e35f3d4d59ecb8749bdf33d7b433 376 SUPERFAMILY SSF48695 22 115 1.36E-19 T 22-04-2016 IPR011031 Multihaem cytochrome SMGD1_RS06385 23b0e35f3d4d59ecb8749bdf33d7b433 376 SUPERFAMILY SSF48695 154 210 1.36E-19 T 22-04-2016 IPR011031 Multihaem cytochrome SMGD1_RS06385 23b0e35f3d4d59ecb8749bdf33d7b433 376 Gene3D G3DSA:1.10.710.10 20 226 6.9E-15 T 22-04-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 SMGD1_RS06945 f74d609183479afba1063e0da35788a5 283 PANTHER PTHR30606 101 280 2.8E-23 T 22-04-2016 SMGD1_RS06945 f74d609183479afba1063e0da35788a5 283 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 93 279 2.4E-15 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 SMGD1_RS06945 f74d609183479afba1063e0da35788a5 283 PANTHER PTHR30606:SF2 101 280 2.8E-23 T 22-04-2016 SMGD1_RS06525 9a5935e0e622616eb233392573f203eb 641 Gene3D G3DSA:3.30.70.120 540 629 6.4E-4 T 22-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal SMGD1_RS06525 9a5935e0e622616eb233392573f203eb 641 SUPERFAMILY SSF54913 535 633 1.24E-9 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta SMGD1_RS06525 9a5935e0e622616eb233392573f203eb 641 Pfam PF07556 Protein of unknown function (DUF1538) 277 487 4.5E-70 T 22-04-2016 IPR011435 Protein of unknown function DUF1538 SMGD1_RS06525 9a5935e0e622616eb233392573f203eb 641 Pfam PF07556 Protein of unknown function (DUF1538) 21 231 4.1E-69 T 22-04-2016 IPR011435 Protein of unknown function DUF1538 SMGD1_RS08955 8e8de3b9cb46ba96660651b22f1cfe67 220 TIGRFAM TIGR02001 gcw_chp: conserved hypothetical protein 4 220 4.7E-40 T 22-04-2016 IPR010239 Conserved hypothetical protein CHP02001 SMGD1_RS08955 8e8de3b9cb46ba96660651b22f1cfe67 220 Pfam PF09694 Bacterial protein of unknown function (Gcw_chp) 21 213 7.2E-30 T 22-04-2016 IPR010239 Conserved hypothetical protein CHP02001 SMGD1_RS07350 ab3183fd0b7138a0a42eb82d38b4c776 335 Pfam PF13387 Domain of unknown function (DUF4105) 121 273 7.7E-38 T 22-04-2016 IPR025178 Domain of unknown function DUF4105 SMGD1_RS01810 fdfa2c11f70c3f8811e6b8e0fd4cd58e 231 SUPERFAMILY SSF53335 3 175 3.16E-25 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS01810 fdfa2c11f70c3f8811e6b8e0fd4cd58e 231 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 98 104 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 SMGD1_RS01810 fdfa2c11f70c3f8811e6b8e0fd4cd58e 231 Pfam PF05175 Methyltransferase small domain 22 109 1.3E-17 T 22-04-2016 IPR007848 Methyltransferase small domain GO:0008168 SMGD1_RS01810 fdfa2c11f70c3f8811e6b8e0fd4cd58e 231 Gene3D G3DSA:3.40.50.150 15 220 3.6E-43 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMGD1_RS01810 fdfa2c11f70c3f8811e6b8e0fd4cd58e 231 PANTHER PTHR18895 19 216 9.2E-19 T 22-04-2016 SMGD1_RS00045 740bb791cea5e80d17122eccb8291d4c 545 Pfam PF06934 Fatty acid cis/trans isomerase (CTI) 1 539 2.0E-189 T 22-04-2016 IPR010706 Fatty acid cis-trans isomerase SMGD1_RS11855 535e2c78db5b0043b33b8dc0003858a5 319 SUPERFAMILY SSF53850 29 246 1.09E-23 T 22-04-2016 SMGD1_RS11855 535e2c78db5b0043b33b8dc0003858a5 319 Gene3D G3DSA:3.40.190.10 114 230 3.1E-10 T 22-04-2016 SMGD1_RS11855 535e2c78db5b0043b33b8dc0003858a5 319 PANTHER PTHR30024 11 298 8.4E-30 T 22-04-2016 SMGD1_RS11855 535e2c78db5b0043b33b8dc0003858a5 319 PANTHER PTHR30024:SF8 11 298 8.4E-30 T 22-04-2016 SMGD1_RS11855 535e2c78db5b0043b33b8dc0003858a5 319 Pfam PF09084 NMT1/THI5 like 43 243 1.3E-14 T 22-04-2016 IPR015168 SsuA/THI5-like SMGD1_RS05780 047e4814dc6c1f1f40879a9c52d5ccda 89 Pfam PF04359 Protein of unknown function (DUF493) 13 89 2.0E-18 T 22-04-2016 IPR007454 Uncharacterised protein family UPF0250 SMGD1_RS05780 047e4814dc6c1f1f40879a9c52d5ccda 89 Gene3D G3DSA:3.30.70.1460 11 89 1.6E-15 T 22-04-2016 IPR027471 YbeD-like domain SMGD1_RS05780 047e4814dc6c1f1f40879a9c52d5ccda 89 ProDom PD061650 JHP0447 HP0495 CJ0253 15 89 9.0E-32 T 22-04-2016 SMGD1_RS05780 047e4814dc6c1f1f40879a9c52d5ccda 89 SUPERFAMILY SSF117991 6 89 2.09E-23 T 22-04-2016 IPR027471 YbeD-like domain SMGD1_RS00945 097830c64aa9ef94a89510e58c45bdfb 448 Gene3D G3DSA:2.40.160.10 33 364 8.1E-22 T 22-04-2016 IPR023614 Porin domain SMGD1_RS10010 0c2b0fbd431e5dd0cf80e948f0c125ec 164 Pfam PF13855 Leucine rich repeat 99 155 6.5E-8 T 22-04-2016 IPR001611 Leucine-rich repeat GO:0005515 SMGD1_RS10010 0c2b0fbd431e5dd0cf80e948f0c125ec 164 SUPERFAMILY SSF52058 50 158 3.06E-23 T 22-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like SMGD1_RS10010 0c2b0fbd431e5dd0cf80e948f0c125ec 164 Gene3D G3DSA:3.80.10.10 51 157 1.7E-23 T 22-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like SMGD1_RS10010 0c2b0fbd431e5dd0cf80e948f0c125ec 164 PANTHER PTHR23155 51 160 2.2E-25 T 22-04-2016 SMGD1_RS10010 0c2b0fbd431e5dd0cf80e948f0c125ec 164 SMART SM00369 74 96 30.0 T 22-04-2016 IPR003591 Leucine-rich repeat, typical subtype SMGD1_RS10010 0c2b0fbd431e5dd0cf80e948f0c125ec 164 SMART SM00369 120 143 16.0 T 22-04-2016 IPR003591 Leucine-rich repeat, typical subtype SMGD1_RS10010 0c2b0fbd431e5dd0cf80e948f0c125ec 164 SMART SM00369 97 119 0.32 T 22-04-2016 IPR003591 Leucine-rich repeat, typical subtype SMGD1_RS00980 7eb367d4839cc2741ecffb9e678a6244 312 Gene3D G3DSA:3.30.310.70 47 160 9.3E-9 T 22-04-2016 IPR005180 Domain of unknown function DUF302 SMGD1_RS00980 7eb367d4839cc2741ecffb9e678a6244 312 SUPERFAMILY SSF103247 201 309 3.14E-9 T 22-04-2016 IPR005180 Domain of unknown function DUF302 SMGD1_RS00980 7eb367d4839cc2741ecffb9e678a6244 312 Gene3D G3DSA:3.30.310.70 240 310 2.4E-6 T 22-04-2016 IPR005180 Domain of unknown function DUF302 SMGD1_RS00980 7eb367d4839cc2741ecffb9e678a6244 312 SUPERFAMILY SSF103247 47 161 4.84E-13 T 22-04-2016 IPR005180 Domain of unknown function DUF302 SMGD1_RS04960 911c9a4349515312f90773074874dfbe 163 Pfam PF16694 Cytochrome P460 26 136 3.7E-13 T 22-04-2016 IPR032033 Cytochrome P460 SMGD1_RS02580 a6005ed9da2cb92868e91ec54f1f5f38 330 SUPERFAMILY SSF51735 1 268 2.46E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS02580 a6005ed9da2cb92868e91ec54f1f5f38 330 PANTHER PTHR10366:SF360 6 263 3.8E-121 T 22-04-2016 SMGD1_RS02580 a6005ed9da2cb92868e91ec54f1f5f38 330 Gene3D G3DSA:3.40.50.720 307 328 1.3E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS02580 a6005ed9da2cb92868e91ec54f1f5f38 330 Gene3D G3DSA:3.40.50.720 5 200 1.3E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS02580 a6005ed9da2cb92868e91ec54f1f5f38 330 PANTHER PTHR10366 6 263 3.8E-121 T 22-04-2016 SMGD1_RS02580 a6005ed9da2cb92868e91ec54f1f5f38 330 Pfam PF02719 Polysaccharide biosynthesis protein 7 280 4.4E-104 T 22-04-2016 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain SMGD1_RS02580 a6005ed9da2cb92868e91ec54f1f5f38 330 TIGRFAM TIGR03589 PseB: UDP-N-acetylglucosamine 4,6-dehydratase (inverting) 1 327 9.5E-171 T 22-04-2016 IPR020025 UDP-N-acetylglucosamine 4,6-dehydratase (inverting) KEGG: 00010+4.2.1.11|KEGG: 00520+4.2.1.115|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6143|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|MetaCyc: PWY-7330|MetaCyc: PWY-7331|MetaCyc: PWY-7332|MetaCyc: PWY-7719 SMGD1_RS10520 ba6657989131ba71ca28f1da6c14dc7d 154 SUPERFAMILY SSF64438 5 152 6.04E-46 T 22-04-2016 IPR011324 Cytotoxic necrotizing factor-like, catalytic SMGD1_RS10520 ba6657989131ba71ca28f1da6c14dc7d 154 PANTHER PTHR35147:SF1 6 153 1.8E-40 T 22-04-2016 SMGD1_RS10520 ba6657989131ba71ca28f1da6c14dc7d 154 Pfam PF03975 CheD chemotactic sensory transduction 57 147 1.1E-26 T 22-04-2016 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 SMGD1_RS10520 ba6657989131ba71ca28f1da6c14dc7d 154 PANTHER PTHR35147 6 153 1.8E-40 T 22-04-2016 SMGD1_RS10520 ba6657989131ba71ca28f1da6c14dc7d 154 Hamap MF_01440 Chemoreceptor glutamine deamidase CheD [cheD]. 1 152 25.791 T 22-04-2016 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 SMGD1_RS07945 dbb64130ca9a122bec12ed76db95f43c 578 Pfam PF07556 Protein of unknown function (DUF1538) 72 294 1.6E-58 T 22-04-2016 IPR011435 Protein of unknown function DUF1538 SMGD1_RS07945 dbb64130ca9a122bec12ed76db95f43c 578 Pfam PF07556 Protein of unknown function (DUF1538) 341 565 7.4E-63 T 22-04-2016 IPR011435 Protein of unknown function DUF1538 SMGD1_RS08980 884d662d33b666a1d403c28763438b1b 207 Pfam PF04028 Domain of unknown function (DUF374) 63 130 1.2E-24 T 22-04-2016 IPR007172 Domain of unknown function DUF374 SMGD1_RS08980 884d662d33b666a1d403c28763438b1b 207 ProDom PD032436 LIPOPROTEIN UNCHARACTERIZED PROBABLE CJ0457C SIMILAR TRANSFERASE BACTERIA PRECURSOR SIGNAL CC0304 9 132 1.0E-58 T 22-04-2016 IPR007172 Domain of unknown function DUF374 SMGD1_RS12900 d7e7ec7e4ca5955d9cdfa2f7b98ea748 206 Pfam PF13114 RecO N terminal 1 72 1.1E-30 T 22-04-2016 IPR022572 DNA replication/recombination mediator RecO, N-terminal SMGD1_RS07995 0dac8170d6fca7f4ef8ce4a563f69cf0 117 Pfam PF07849 Protein of unknown function (DUF1641) 79 115 1.3E-12 T 22-04-2016 IPR012440 Protein of unknown function DUF1641 SMGD1_RS00770 cee408c6b75b9cd3e4127b9e8f1329d9 295 PANTHER PTHR12001 1 295 6.1E-62 T 22-04-2016 IPR017446 Polyprenyl synthetase-related SMGD1_RS00770 cee408c6b75b9cd3e4127b9e8f1329d9 295 Pfam PF00348 Polyprenyl synthetase 26 238 4.0E-54 T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 SMGD1_RS00770 cee408c6b75b9cd3e4127b9e8f1329d9 295 SUPERFAMILY SSF48576 25 293 1.01E-67 T 22-04-2016 IPR008949 Isoprenoid synthase domain SMGD1_RS00770 cee408c6b75b9cd3e4127b9e8f1329d9 295 Gene3D G3DSA:1.10.600.10 1 294 8.2E-80 T 22-04-2016 IPR008949 Isoprenoid synthase domain SMGD1_RS00770 cee408c6b75b9cd3e4127b9e8f1329d9 295 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 181 193 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 SMGD1_RS00770 cee408c6b75b9cd3e4127b9e8f1329d9 295 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 63 77 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 SMGD1_RS00450 7d68100b1a823e094ec0be2fd88f0517 189 Pfam PF00990 Diguanylate cyclase, GGDEF domain 48 182 4.0E-9 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS00450 7d68100b1a823e094ec0be2fd88f0517 189 SUPERFAMILY SSF55073 49 186 3.14E-11 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS00450 7d68100b1a823e094ec0be2fd88f0517 189 Gene3D G3DSA:3.30.70.270 49 185 1.1E-10 T 22-04-2016 SMGD1_RS09515 4a211c38cd6dca0497e187fbbcb7b335 311 Gene3D G3DSA:3.30.300.120 164 237 1.4E-11 T 22-04-2016 SMGD1_RS09515 4a211c38cd6dca0497e187fbbcb7b335 311 Gene3D G3DSA:3.30.30.80 1 52 1.5E-15 T 22-04-2016 IPR032782 Jag, N-terminal SMGD1_RS09515 4a211c38cd6dca0497e187fbbcb7b335 311 SMART SM01245 3 54 2.1E-15 T 22-04-2016 IPR032782 Jag, N-terminal SMGD1_RS09515 4a211c38cd6dca0497e187fbbcb7b335 311 Pfam PF14804 Jag N-terminus 5 51 1.5E-12 T 22-04-2016 IPR032782 Jag, N-terminal SMGD1_RS09190 212224deb7105c6ecaf8d6697dcd5d78 462 Pfam PF02169 LPP20 lipoprotein 20 68 4.4E-6 T 22-04-2016 IPR024952 Lipoprotein LPP20-like SMGD1_RS01210 c90183ddde9b53415ef7688e62f59850 93 SUPERFAMILY SSF53041 2 70 1.44E-13 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 SMGD1_RS01210 c90183ddde9b53415ef7688e62f59850 93 PANTHER PTHR30461 1 84 1.8E-13 T 22-04-2016 SMGD1_RS01210 c90183ddde9b53415ef7688e62f59850 93 Pfam PF00239 Resolvase, N terminal domain 3 69 1.1E-12 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 SMGD1_RS01210 c90183ddde9b53415ef7688e62f59850 93 Gene3D G3DSA:1.20.5.40 32 69 7.7E-14 T 22-04-2016 SMGD1_RS13920 fd7aab53a6f4c14350efe4e68230cf1b 357 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 1 356 28.575 T 22-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMGD1_RS13920 fd7aab53a6f4c14350efe4e68230cf1b 357 PANTHER PTHR13326 1 181 2.4E-40 T 22-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMGD1_RS13920 fd7aab53a6f4c14350efe4e68230cf1b 357 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 4 181 1.2E-49 T 22-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMGD1_RS13920 fd7aab53a6f4c14350efe4e68230cf1b 357 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 184 351 5.6E-12 T 22-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMGD1_RS13920 fd7aab53a6f4c14350efe4e68230cf1b 357 SUPERFAMILY SSF55120 4 208 3.88E-87 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMGD1_RS13920 fd7aab53a6f4c14350efe4e68230cf1b 357 SUPERFAMILY SSF55120 238 353 3.88E-87 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMGD1_RS13920 fd7aab53a6f4c14350efe4e68230cf1b 357 TIGRFAM TIGR00094 tRNA_TruD_broad: tRNA pseudouridine synthase, TruD family 9 355 3.7E-68 T 22-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMGD1_RS13880 6fb680aa82d6680c530d2e5af1756152 195 Gene3D G3DSA:3.40.630.30 10 165 8.0E-18 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMGD1_RS13880 6fb680aa82d6680c530d2e5af1756152 195 Pfam PF13444 Acetyltransferase (GNAT) domain 35 115 7.8E-10 T 22-04-2016 SMGD1_RS13880 6fb680aa82d6680c530d2e5af1756152 195 SUPERFAMILY SSF55729 7 177 1.38E-17 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMGD1_RS00995 a966cce8e1d7e4e42ea7554eef59bb3b 153 SMART SM00271 88 153 1.1E-6 T 22-04-2016 IPR001623 DnaJ domain SMGD1_RS00995 a966cce8e1d7e4e42ea7554eef59bb3b 153 Pfam PF00226 DnaJ domain 89 152 4.4E-8 T 22-04-2016 IPR001623 DnaJ domain SMGD1_RS00995 a966cce8e1d7e4e42ea7554eef59bb3b 153 SUPERFAMILY SSF46565 59 151 2.75E-14 T 22-04-2016 IPR001623 DnaJ domain SMGD1_RS00995 a966cce8e1d7e4e42ea7554eef59bb3b 153 PRINTS PR00625 DnaJ domain signature 109 124 9.7E-7 T 22-04-2016 IPR001623 DnaJ domain SMGD1_RS00995 a966cce8e1d7e4e42ea7554eef59bb3b 153 PRINTS PR00625 DnaJ domain signature 91 109 9.7E-7 T 22-04-2016 IPR001623 DnaJ domain SMGD1_RS00995 a966cce8e1d7e4e42ea7554eef59bb3b 153 PRINTS PR00625 DnaJ domain signature 133 153 9.7E-7 T 22-04-2016 IPR001623 DnaJ domain SMGD1_RS00995 a966cce8e1d7e4e42ea7554eef59bb3b 153 Gene3D G3DSA:1.10.287.110 68 151 1.4E-11 T 22-04-2016 IPR001623 DnaJ domain SMGD1_RS00360 050d2f25ab20a0ef691139ff5c1b503f 257 Pfam PF13795 HupE / UreJ protein 38 192 5.2E-49 T 22-04-2016 IPR032809 Putative HupE/UreJ protein SMGD1_RS09765 ac1a75981dd6f1d026a63641d0196ed3 95 SUPERFAMILY SSF46626 18 88 1.26E-10 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS09765 ac1a75981dd6f1d026a63641d0196ed3 95 Gene3D G3DSA:1.10.760.10 13 89 4.2E-12 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS07100 a0d442838eaa80f5143e4f1653e6e89c 605 SUPERFAMILY SSF48695 328 390 3.81E-22 T 22-04-2016 IPR011031 Multihaem cytochrome SMGD1_RS07100 a0d442838eaa80f5143e4f1653e6e89c 605 SUPERFAMILY SSF48695 262 282 3.81E-22 T 22-04-2016 IPR011031 Multihaem cytochrome SMGD1_RS07100 a0d442838eaa80f5143e4f1653e6e89c 605 SUPERFAMILY SSF48695 171 234 3.81E-22 T 22-04-2016 IPR011031 Multihaem cytochrome SMGD1_RS07100 a0d442838eaa80f5143e4f1653e6e89c 605 Gene3D G3DSA:1.10.710.10 171 393 2.3E-16 T 22-04-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 SMGD1_RS07100 a0d442838eaa80f5143e4f1653e6e89c 605 Pfam PF13435 Cytochrome c554 and c-prime 177 237 0.015 T 22-04-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 SMGD1_RS01280 53d4c91aeefb90776394133490fc9aa5 359 Pfam PF05099 Tellurite resistance protein TerB 255 356 1.3E-9 T 22-04-2016 IPR007791 Co-chaperone DjlA, N-terminal SMGD1_RS01280 53d4c91aeefb90776394133490fc9aa5 359 Gene3D G3DSA:1.10.3680.10 258 355 2.9E-9 T 22-04-2016 IPR029024 TerB-like SMGD1_RS01280 53d4c91aeefb90776394133490fc9aa5 359 SUPERFAMILY SSF158682 244 358 1.03E-12 T 22-04-2016 IPR029024 TerB-like SMGD1_RS12535 b24f5f655a5404c82a47fd8468ba86e4 235 SUPERFAMILY SSF52402 6 194 8.72E-44 T 22-04-2016 SMGD1_RS12535 b24f5f655a5404c82a47fd8468ba86e4 235 TIGRFAM TIGR02055 APS_reductase: adenylylsulfate reductase, thioredoxin dependent 37 230 5.4E-75 T 22-04-2016 IPR011798 Adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019344|GO:0055114 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 SMGD1_RS12535 b24f5f655a5404c82a47fd8468ba86e4 235 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 29 231 1.8E-51 T 22-04-2016 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 SMGD1_RS12535 b24f5f655a5404c82a47fd8468ba86e4 235 Gene3D G3DSA:3.40.50.620 5 202 3.5E-51 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMGD1_RS12535 b24f5f655a5404c82a47fd8468ba86e4 235 PIRSF PIRSF000857 1 235 1.5E-77 T 22-04-2016 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 SMGD1_RS12535 b24f5f655a5404c82a47fd8468ba86e4 235 PANTHER PTHR23293 2 234 3.1E-73 T 22-04-2016 SMGD1_RS12535 b24f5f655a5404c82a47fd8468ba86e4 235 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 32 206 8.7E-42 T 22-04-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 SMGD1_RS12535 b24f5f655a5404c82a47fd8468ba86e4 235 PANTHER PTHR23293:SF12 2 234 3.1E-73 T 22-04-2016 SMGD1_RS11535 31c5c3c9084e90e608e271e9fe25042e 435 Pfam PF17033 Carboxypeptidase controlling helical cell shape catalytic 30 267 2.6E-63 T 22-04-2016 IPR031489 D,L-carboxypeptidase, peptidase domain SMGD1_RS11535 31c5c3c9084e90e608e271e9fe25042e 435 Gene3D G3DSA:3.40.630.10 27 249 4.6E-12 T 22-04-2016 SMGD1_RS11535 31c5c3c9084e90e608e271e9fe25042e 435 Pfam PF17129 C-terminal domain of metallo-carboxypeptidase 345 434 3.6E-20 T 22-04-2016 IPR033397 Metallo-carboxypeptidase, C-terminal domain SMGD1_RS11535 31c5c3c9084e90e608e271e9fe25042e 435 SUPERFAMILY SSF53187 38 258 6.28E-25 T 22-04-2016 SMGD1_RS13055 6ebfc716dc51834c16dde5eaa1c691e6 176 Pfam PF03748 Flagellar basal body-associated protein FliL 80 176 1.7E-9 T 22-04-2016 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 SMGD1_RS08555 8873e9b5a98891c3a56d6e2855d128e9 68 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 4 26 5.8E-6 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal SMGD1_RS00190 3919f9744ae7196da31aad6b344fdbc4 235 Pfam PF05573 NosL 51 159 1.5E-16 T 22-04-2016 IPR008719 Nitrous oxide reductase accessory protein NosL SMGD1_RS00190 3919f9744ae7196da31aad6b344fdbc4 235 SUPERFAMILY SSF160387 74 177 6.54E-30 T 22-04-2016 SMGD1_RS04355 91cd716aadf7260d2d7ba8a585335010 257 Pfam PF15436 Plasminogen-binding protein pgbA N-terminal 19 234 4.7E-73 T 22-04-2016 IPR029276 Plasminogen-binding protein PgbA, N-terminal SMGD1_RS13425 03848581efc0a29028ec51f0e09066ec 68 TIGRFAM TIGR03940 PGA_PgaD: poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD 3 64 1.4E-10 T 22-04-2016 IPR023829 Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD GO:0042710 SMGD1_RS13425 03848581efc0a29028ec51f0e09066ec 68 Pfam PF13994 PgaD-like protein 2 62 5.7E-11 T 22-04-2016 IPR023829 Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD GO:0042710 SMGD1_RS05905 d6184a40ed32c5a624691463168d1140 172 PANTHER PTHR11635 8 126 4.5E-14 T 22-04-2016 SMGD1_RS05905 d6184a40ed32c5a624691463168d1140 172 SUPERFAMILY SSF51206 31 132 1.57E-22 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like SMGD1_RS05905 d6184a40ed32c5a624691463168d1140 172 Gene3D G3DSA:2.60.120.10 22 132 1.6E-23 T 22-04-2016 IPR014710 RmlC-like jelly roll fold SMGD1_RS05905 d6184a40ed32c5a624691463168d1140 172 SMART SM00100 43 157 1.8E-12 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain SMGD1_RS05905 d6184a40ed32c5a624691463168d1140 172 Pfam PF00027 Cyclic nucleotide-binding domain 62 133 2.8E-10 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain SMGD1_RS12850 4588b63e00118496eeb346c0568ecf8f 414 SUPERFAMILY SSF56935 80 409 7.94E-28 T 22-04-2016 SMGD1_RS12850 4588b63e00118496eeb346c0568ecf8f 414 Gene3D G3DSA:2.40.160.10 93 299 2.3E-11 T 22-04-2016 IPR023614 Porin domain SMGD1_RS11870 58eeb00b6470f34c49674c2b4f317025 119 PANTHER PTHR35145 1 118 3.7E-31 T 22-04-2016 SMGD1_RS11870 58eeb00b6470f34c49674c2b4f317025 119 Pfam PF04237 YjbR 14 102 1.6E-21 T 22-04-2016 IPR007351 Uncharacterised protein YjbR SMGD1_RS11870 58eeb00b6470f34c49674c2b4f317025 119 SUPERFAMILY SSF142906 1 116 3.27E-36 T 22-04-2016 SMGD1_RS11420 150d6346fb22c141f49b9b2686abc0f4 238 Pfam PF13103 TonB C terminal 152 207 7.0E-7 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 SMGD1_RS11420 150d6346fb22c141f49b9b2686abc0f4 238 SUPERFAMILY SSF74653 149 230 1.02E-7 T 22-04-2016 SMGD1_RS06835 4fe823971ad89e48472c1c9e4680b688 221 Pfam PF11741 AMIN domain 141 219 3.7E-9 T 22-04-2016 IPR021731 AMIN domain SMGD1_RS03680 b159ad1a5be7b197d6a22a70b6a473d4 259 Pfam PF02108 Flagellar assembly protein FliH 129 252 5.7E-23 T 22-04-2016 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE SMGD1_RS12100 08ac8902ccf34599e6aa8ea359b5530e 96 TIGRFAM TIGR03954 integ_memb_HG: integral membrane protein 11 92 6.3E-30 T 22-04-2016 IPR023845 Domain of unknown function DUF3817, transmembrane SMGD1_RS12100 08ac8902ccf34599e6aa8ea359b5530e 96 Pfam PF12823 Domain of unknown function (DUF3817) 9 93 6.2E-23 T 22-04-2016 IPR023845 Domain of unknown function DUF3817, transmembrane SMGD1_RS12100 08ac8902ccf34599e6aa8ea359b5530e 96 PANTHER PTHR40077 1 95 7.0E-15 T 22-04-2016 SMGD1_RS13865 2da78754c53016e81cc50f1f9c2ecba0 197 Gene3D G3DSA:3.40.30.10 53 188 5.2E-18 T 22-04-2016 IPR012336 Thioredoxin-like fold SMGD1_RS13865 2da78754c53016e81cc50f1f9c2ecba0 197 SUPERFAMILY SSF52833 53 188 4.48E-12 T 22-04-2016 IPR012336 Thioredoxin-like fold SMGD1_RS13865 2da78754c53016e81cc50f1f9c2ecba0 197 Pfam PF02630 SCO1/SenC 47 160 2.1E-10 T 22-04-2016 IPR003782 Copper chaperone SCO1/SenC SMGD1_RS11120 aa04cb13ab250ea0755df80dcca5ee3d 139 SUPERFAMILY SSF52833 16 132 5.44E-26 T 22-04-2016 IPR012336 Thioredoxin-like fold SMGD1_RS11120 aa04cb13ab250ea0755df80dcca5ee3d 139 Gene3D G3DSA:3.40.30.10 18 131 7.5E-25 T 22-04-2016 IPR012336 Thioredoxin-like fold SMGD1_RS11120 aa04cb13ab250ea0755df80dcca5ee3d 139 Pfam PF13899 Thioredoxin-like 20 80 7.0E-12 T 22-04-2016 SMGD1_RS03510 ca6f5c36a588cd0217d22f3af3a39284 164 Pfam PF05573 NosL 45 152 2.4E-10 T 22-04-2016 IPR008719 Nitrous oxide reductase accessory protein NosL SMGD1_RS03510 ca6f5c36a588cd0217d22f3af3a39284 164 SUPERFAMILY SSF160387 68 162 6.28E-24 T 22-04-2016 SMGD1_RS05125 4f51bb5973b0813c79edd7ffc5791e17 113 SUPERFAMILY SSF47226 7 108 4.97E-15 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SMGD1_RS05125 4f51bb5973b0813c79edd7ffc5791e17 113 Pfam PF01627 Hpt domain 31 101 3.8E-9 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SMGD1_RS05125 4f51bb5973b0813c79edd7ffc5791e17 113 Gene3D G3DSA:1.20.120.160 6 110 3.1E-15 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SMGD1_RS04185 54e471bbfd037d25093dd94020337b34 284 Pfam PF08376 Nitrate and nitrite sensing 37 265 2.6E-7 T 22-04-2016 IPR013587 Nitrate/nitrite sensing protein SMGD1_RS06080 557e3e6e88eb4249443d97000ad9c5b5 232 PANTHER PTHR23291 1 232 1.0E-48 T 22-04-2016 IPR006214 Bax inhibitor 1-related SMGD1_RS06080 557e3e6e88eb4249443d97000ad9c5b5 232 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 28 225 1.5E-41 T 22-04-2016 SMGD1_RS01340 f205605f32b4890c63cdf056f472130e 110 Pfam PF13276 HTH-like domain 23 78 1.1E-15 T 22-04-2016 IPR025948 HTH-like domain SMGD1_RS10895 35def9950a92e69e01bab353f5ef02f3 153 Gene3D G3DSA:3.30.420.40 19 89 1.2E-4 T 22-04-2016 SMGD1_RS10895 35def9950a92e69e01bab353f5ef02f3 153 SUPERFAMILY SSF53067 15 94 2.52E-10 T 22-04-2016 SMGD1_RS13350 76430add89a8175bd406876b26d742ce 260 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 43 236 6.6E-7 T 22-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 SMGD1_RS05890 88a7a3dd70f31ed52f8e15a239f57991 348 Pfam PF13181 Tetratricopeptide repeat 109 138 0.037 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMGD1_RS05890 88a7a3dd70f31ed52f8e15a239f57991 348 Pfam PF13181 Tetratricopeptide repeat 72 99 7.6E-5 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMGD1_RS05890 88a7a3dd70f31ed52f8e15a239f57991 348 SMART SM00028 71 104 0.017 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMGD1_RS05890 88a7a3dd70f31ed52f8e15a239f57991 348 SMART SM00028 107 140 20.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMGD1_RS05890 88a7a3dd70f31ed52f8e15a239f57991 348 Gene3D G3DSA:1.25.40.10 30 159 8.1E-18 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS05890 88a7a3dd70f31ed52f8e15a239f57991 348 TIGRFAM TIGR00756 PPR: pentatricopeptide repeat domain 74 101 0.0024 T 22-04-2016 IPR002885 Pentatricopeptide repeat SMGD1_RS05890 88a7a3dd70f31ed52f8e15a239f57991 348 SUPERFAMILY SSF48452 63 165 7.59E-19 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS09150 b7eddba4cd0325dccc1a13841b9b7b9d 245 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 33 46 - T 22-04-2016 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 SMGD1_RS09150 b7eddba4cd0325dccc1a13841b9b7b9d 245 Pfam PF00290 Tryptophan synthase alpha chain 2 241 1.5E-62 T 22-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 SMGD1_RS09150 b7eddba4cd0325dccc1a13841b9b7b9d 245 SUPERFAMILY SSF51366 3 224 4.8E-62 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 SMGD1_RS09150 b7eddba4cd0325dccc1a13841b9b7b9d 245 Gene3D G3DSA:3.20.20.70 2 244 4.3E-73 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMGD1_RS09150 b7eddba4cd0325dccc1a13841b9b7b9d 245 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 3 222 1.7E-55 T 22-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 SMGD1_RS09150 b7eddba4cd0325dccc1a13841b9b7b9d 245 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 2 243 26.593 T 22-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 SMGD1_RS08210 b8a477af9d00fc4941f0e7f3eb3e79b7 186 Gene3D G3DSA:3.10.290.10 16 65 2.0E-4 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SMGD1_RS08210 b8a477af9d00fc4941f0e7f3eb3e79b7 186 SUPERFAMILY SSF55174 16 61 4.21E-5 T 22-04-2016 SMGD1_RS02485 c8eb5e9621fc0829e45a86fc47dbd0d1 119 Gene3D G3DSA:2.60.120.10 38 115 5.7E-6 T 22-04-2016 IPR014710 RmlC-like jelly roll fold SMGD1_RS02485 c8eb5e9621fc0829e45a86fc47dbd0d1 119 SUPERFAMILY SSF51182 3 117 6.45E-29 T 22-04-2016 IPR011051 RmlC-like cupin domain SMGD1_RS02485 c8eb5e9621fc0829e45a86fc47dbd0d1 119 Pfam PF05523 WxcM-like, C-terminal 4 118 1.8E-31 T 22-04-2016 IPR008894 WxcM-like, C-terminal MetaCyc: PWY-6953|MetaCyc: PWY-7688 SMGD1_RS05250 7ac3121b5a4cf544553dddc1c564e110 666 Pfam PF01973 Protein of unknown function DUF115 276 427 3.5E-30 T 22-04-2016 IPR002826 6-hydroxymethylpterin diphosphokinase MptE-like SMGD1_RS07265 c373b467b8b7edaa836c1dd66d9bcbdb 617 Pfam PF03961 Protein of unknown function (DUF342) 149 605 2.0E-34 T 22-04-2016 IPR005646 Protein of unknown function DUF342 SMGD1_RS00175 5b4445a5404f2ead267aef16ea5034c4 394 Pfam PF12704 MacB-like periplasmic core domain 25 230 3.0E-6 T 22-04-2016 IPR025857 MacB-like periplasmic core domain SMGD1_RS00175 5b4445a5404f2ead267aef16ea5034c4 394 Pfam PF02687 FtsX-like permease family 262 386 2.4E-18 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 SMGD1_RS00175 5b4445a5404f2ead267aef16ea5034c4 394 PANTHER PTHR30489 1 394 1.3E-38 T 22-04-2016 SMGD1_RS12555 2240b4d4a2621016528fd5a38cd84df2 70 SUPERFAMILY SSF64518 1 70 3.92E-19 T 22-04-2016 SMGD1_RS12555 2240b4d4a2621016528fd5a38cd84df2 70 PANTHER PTHR30244 3 70 1.4E-20 T 22-04-2016 SMGD1_RS12555 2240b4d4a2621016528fd5a38cd84df2 70 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 70 1.4E-14 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SMGD1_RS12555 2240b4d4a2621016528fd5a38cd84df2 70 PANTHER PTHR30244:SF1 3 70 1.4E-20 T 22-04-2016 SMGD1_RS00005 9cd1bb19baa0383e35f3f1acdc30f838 314 Gene3D G3DSA:2.60.40.60 158 251 7.1E-9 T 22-04-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 SMGD1_RS00005 9cd1bb19baa0383e35f3f1acdc30f838 314 SUPERFAMILY SSF49313 147 250 3.27E-11 T 22-04-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 SMGD1_RS00005 9cd1bb19baa0383e35f3f1acdc30f838 314 SMART SM00112 168 249 6.0E-8 T 22-04-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 SMGD1_RS04575 ca3c42774e91d650122af54e0f0f88aa 608 Pfam PF07556 Protein of unknown function (DUF1538) 88 310 1.7E-50 T 22-04-2016 IPR011435 Protein of unknown function DUF1538 SMGD1_RS04575 ca3c42774e91d650122af54e0f0f88aa 608 Pfam PF07556 Protein of unknown function (DUF1538) 359 580 2.7E-59 T 22-04-2016 IPR011435 Protein of unknown function DUF1538 SMGD1_RS07900 75207fb0d9d5adb32068a2a255b84645 165 Pfam PF13505 Outer membrane protein beta-barrel domain 5 136 4.3E-9 T 22-04-2016 IPR027385 Outer membrane protein beta-barrel SMGD1_RS07900 75207fb0d9d5adb32068a2a255b84645 165 SUPERFAMILY SSF56925 23 137 5.49E-6 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 SMGD1_RS03265 7dc3220e67bfdbf99c1fc33059bad398 272 SUPERFAMILY SSF53098 62 234 1.03E-40 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMGD1_RS03265 7dc3220e67bfdbf99c1fc33059bad398 272 Gene3D G3DSA:3.30.420.10 63 236 7.2E-43 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMGD1_RS03265 7dc3220e67bfdbf99c1fc33059bad398 272 Pfam PF00929 Exonuclease 71 224 1.1E-25 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III SMGD1_RS03265 7dc3220e67bfdbf99c1fc33059bad398 272 PANTHER PTHR30231 29 235 5.9E-32 T 22-04-2016 SMGD1_RS03265 7dc3220e67bfdbf99c1fc33059bad398 272 SMART SM00479 68 233 3.6E-36 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III SMGD1_RS11525 96a9bfaf1ce291cdbb1c9d45a28d8350 210 Gene3D G3DSA:3.30.70.60 124 198 1.5E-7 T 22-04-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 SMGD1_RS11525 96a9bfaf1ce291cdbb1c9d45a28d8350 210 Pfam PF04350 Pilus assembly protein, PilO 93 204 9.3E-5 T 22-04-2016 IPR007445 Pilus assembly protein, PilO SMGD1_RS06335 4b3f1b0161f7c76f1a2657c7d1ec94fb 148 Gene3D G3DSA:3.40.1260.10 18 144 5.7E-12 T 22-04-2016 IPR027396 DsrEFH-like SMGD1_RS06335 4b3f1b0161f7c76f1a2657c7d1ec94fb 148 Pfam PF02635 DsrE/DsrF-like family 24 147 5.5E-10 T 22-04-2016 IPR003787 Sulphur relay, DsrE/F-like protein SMGD1_RS06335 4b3f1b0161f7c76f1a2657c7d1ec94fb 148 SUPERFAMILY SSF75169 20 147 5.89E-16 T 22-04-2016 IPR027396 DsrEFH-like SMGD1_RS14360 5b0989c4c6e9180831cea1540a6f37e7 128 Pfam PF01880 Desulfoferrodoxin 22 119 1.1E-23 T 22-04-2016 IPR002742 Desulfoferrodoxin, ferrous iron-binding domain GO:0005506|GO:0016491|GO:0055114 SMGD1_RS14360 5b0989c4c6e9180831cea1540a6f37e7 128 Gene3D G3DSA:2.60.40.730 3 126 5.8E-27 T 22-04-2016 SMGD1_RS14360 5b0989c4c6e9180831cea1540a6f37e7 128 SUPERFAMILY SSF49367 14 120 4.32E-26 T 22-04-2016 IPR002742 Desulfoferrodoxin, ferrous iron-binding domain GO:0005506|GO:0016491|GO:0055114 SMGD1_RS01050 a4782ff1fc2d05be21a6ead518dff5b2 665 Pfam PF02254 TrkA-N domain 109 192 4.6E-8 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 SMGD1_RS01050 a4782ff1fc2d05be21a6ead518dff5b2 665 SUPERFAMILY SSF51735 106 192 2.17E-5 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS01050 a4782ff1fc2d05be21a6ead518dff5b2 665 Gene3D G3DSA:3.40.50.720 104 195 1.1E-8 T 22-04-2016 IPR016040 NAD(P)-binding domain SMGD1_RS05565 ce6a640e83b6fd4d93f9dda2cf07853f 351 PANTHER PTHR39431 144 281 7.8E-19 T 22-04-2016 SMGD1_RS05565 ce6a640e83b6fd4d93f9dda2cf07853f 351 PANTHER PTHR39431:SF1 144 281 7.8E-19 T 22-04-2016 SMGD1_RS09705 044cc193d313af5d3863fe85dff41194 445 Pfam PF08442 ATP-grasp domain 6 227 1.5E-8 T 22-04-2016 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 SMGD1_RS09705 044cc193d313af5d3863fe85dff41194 445 SUPERFAMILY SSF52210 284 419 4.58E-16 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 SMGD1_RS09705 044cc193d313af5d3863fe85dff41194 445 Gene3D G3DSA:3.30.470.20 116 258 8.1E-23 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SMGD1_RS09705 044cc193d313af5d3863fe85dff41194 445 Gene3D G3DSA:3.40.50.261 285 419 1.3E-12 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 SMGD1_RS09705 044cc193d313af5d3863fe85dff41194 445 PANTHER PTHR23118:SF0 2 443 8.5E-161 T 22-04-2016 SMGD1_RS09705 044cc193d313af5d3863fe85dff41194 445 SUPERFAMILY SSF56059 4 259 1.94E-24 T 22-04-2016 SMGD1_RS09705 044cc193d313af5d3863fe85dff41194 445 Pfam PF16114 ATP citrate lyase citrate-binding 268 444 2.9E-76 T 22-04-2016 IPR032263 ATP-citrate synthase, citrate-binding domain KEGG: 00020+2.3.3.8|KEGG: 00720+2.3.3.8|MetaCyc: PWY-5172 SMGD1_RS09705 044cc193d313af5d3863fe85dff41194 445 PANTHER PTHR23118 2 443 8.5E-161 T 22-04-2016 SMGD1_RS10800 bc705743b87d0c72eae9d1ed4ec4c302 258 PANTHER PTHR33608 1 258 2.0E-40 T 22-04-2016 SMGD1_RS10800 bc705743b87d0c72eae9d1ed4ec4c302 258 Pfam PF01882 Protein of unknown function DUF58 13 94 9.4E-17 T 22-04-2016 IPR002881 Domain of unknown function DUF58 SMGD1_RS03515 1025026c435bb3709b08a847b13e3bcf 165 ProSitePatterns PS00194 Thioredoxin family active site. 61 79 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 SMGD1_RS03515 1025026c435bb3709b08a847b13e3bcf 165 SUPERFAMILY SSF52833 52 152 1.25E-25 T 22-04-2016 IPR012336 Thioredoxin-like fold SMGD1_RS03515 1025026c435bb3709b08a847b13e3bcf 165 Pfam PF00578 AhpC/TSA family 53 144 5.2E-17 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 SMGD1_RS03515 1025026c435bb3709b08a847b13e3bcf 165 PANTHER PTHR10681:SF107 37 140 1.6E-13 T 22-04-2016 SMGD1_RS03515 1025026c435bb3709b08a847b13e3bcf 165 Gene3D G3DSA:3.40.30.10 16 152 2.0E-27 T 22-04-2016 IPR012336 Thioredoxin-like fold SMGD1_RS03515 1025026c435bb3709b08a847b13e3bcf 165 PANTHER PTHR10681 37 140 1.6E-13 T 22-04-2016 SMGD1_RS03980 5ab1df96a0c3dabac9ae0849d7b53273 721 Pfam PF04453 Organic solvent tolerance protein 295 635 9.6E-10 T 22-04-2016 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 SMGD1_RS03980 5ab1df96a0c3dabac9ae0849d7b53273 721 Gene3D G3DSA:2.60.450.10 18 91 4.6E-8 T 22-04-2016 SMGD1_RS03980 5ab1df96a0c3dabac9ae0849d7b53273 721 PANTHER PTHR30189 27 425 1.2E-25 T 22-04-2016 SMGD1_RS03980 5ab1df96a0c3dabac9ae0849d7b53273 721 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 7 703 14.178 T 22-04-2016 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 SMGD1_RS00395 9746fc3b68f76d7b95bcf0a94310cc71 207 SUPERFAMILY SSF101874 74 169 1.05E-6 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like SMGD1_RS00395 9746fc3b68f76d7b95bcf0a94310cc71 207 Pfam PF04264 YceI-like domain 37 197 1.2E-13 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like SMGD1_RS00395 9746fc3b68f76d7b95bcf0a94310cc71 207 Gene3D G3DSA:2.40.128.110 77 174 1.6E-6 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like SMGD1_RS05570 ffedb484c5002d015c7b0c1b4a111b4c 279 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 32 263 3.0E-34 T 22-04-2016 SMGD1_RS05570 ffedb484c5002d015c7b0c1b4a111b4c 279 SUPERFAMILY SSF53850 52 189 3.96E-14 T 22-04-2016 SMGD1_RS14080 e2177eb0aa57651febb8faf6f25541db 464 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 53 210 4.2E-34 T 22-04-2016 SMGD1_RS14080 e2177eb0aa57651febb8faf6f25541db 464 PANTHER PTHR33908:SF1 11 316 7.8E-43 T 22-04-2016 SMGD1_RS14080 e2177eb0aa57651febb8faf6f25541db 464 PANTHER PTHR33908 11 316 7.8E-43 T 22-04-2016 SMGD1_RS11790 41932c7301bf1abadad54777f50a0347 488 SUPERFAMILY SSF109998 41 167 2.16E-18 T 22-04-2016 IPR027304 Trigger factor/SurA domain SMGD1_RS11790 41932c7301bf1abadad54777f50a0347 488 SUPERFAMILY SSF109998 200 222 2.16E-18 T 22-04-2016 IPR027304 Trigger factor/SurA domain SMGD1_RS11790 41932c7301bf1abadad54777f50a0347 488 PANTHER PTHR10657:SF11 197 230 2.3E-16 T 22-04-2016 SMGD1_RS11790 41932c7301bf1abadad54777f50a0347 488 PANTHER PTHR10657:SF11 1 166 2.3E-16 T 22-04-2016 SMGD1_RS11790 41932c7301bf1abadad54777f50a0347 488 Pfam PF13624 SurA N-terminal domain 1 163 2.6E-41 T 22-04-2016 SMGD1_RS11790 41932c7301bf1abadad54777f50a0347 488 Pfam PF13145 PPIC-type PPIASE domain 241 362 7.4E-10 T 22-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 SMGD1_RS11790 41932c7301bf1abadad54777f50a0347 488 PANTHER PTHR10657 197 230 2.3E-16 T 22-04-2016 SMGD1_RS11790 41932c7301bf1abadad54777f50a0347 488 PANTHER PTHR10657 1 166 2.3E-16 T 22-04-2016 SMGD1_RS00260 9dc1bfd3b7ae45bded230bc51317977d 155 Gene3D G3DSA:3.40.1260.10 22 150 4.6E-18 T 22-04-2016 IPR027396 DsrEFH-like SMGD1_RS00260 9dc1bfd3b7ae45bded230bc51317977d 155 Pfam PF02635 DsrE/DsrF-like family 53 150 1.4E-11 T 22-04-2016 IPR003787 Sulphur relay, DsrE/F-like protein SMGD1_RS00260 9dc1bfd3b7ae45bded230bc51317977d 155 SUPERFAMILY SSF75169 48 151 8.83E-15 T 22-04-2016 IPR027396 DsrEFH-like SMGD1_RS13560 1d3a170d64bb5db4f590a8190c4f8734 511 PANTHER PTHR11059 2 509 1.3E-42 T 22-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 SMGD1_RS13560 1d3a170d64bb5db4f590a8190c4f8734 511 SUPERFAMILY SSF52540 1 187 1.41E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS13560 1d3a170d64bb5db4f590a8190c4f8734 511 SUPERFAMILY SSF52540 271 482 1.41E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS13560 1d3a170d64bb5db4f590a8190c4f8734 511 Gene3D G3DSA:3.40.50.300 305 306 3.3E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS13560 1d3a170d64bb5db4f590a8190c4f8734 511 Gene3D G3DSA:3.40.50.300 1 164 3.3E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS13560 1d3a170d64bb5db4f590a8190c4f8734 511 Gene3D G3DSA:3.40.50.300 374 491 3.3E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS13560 1d3a170d64bb5db4f590a8190c4f8734 511 PIRSF PIRSF003128 1 511 1.4E-98 T 22-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 SMGD1_RS13560 1d3a170d64bb5db4f590a8190c4f8734 511 Pfam PF13476 AAA domain 7 215 2.6E-6 T 22-04-2016 SMGD1_RS13005 048cad140038d469d645a1aa60f824fe 300 Pfam PF03547 Membrane transport protein 155 293 3.3E-9 T 22-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 SMGD1_RS13005 048cad140038d469d645a1aa60f824fe 300 Pfam PF03547 Membrane transport protein 1 140 6.5E-17 T 22-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 SMGD1_RS13005 048cad140038d469d645a1aa60f824fe 300 PANTHER PTHR36838 1 300 9.5E-57 T 22-04-2016 SMGD1_RS13005 048cad140038d469d645a1aa60f824fe 300 PANTHER PTHR36838:SF1 1 300 9.5E-57 T 22-04-2016 SMGD1_RS00985 4ee694becf5104d0a85d9b074bf0f6ee 544 Pfam PF01384 Phosphate transporter family 66 532 2.7E-113 T 22-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 SMGD1_RS00985 4ee694becf5104d0a85d9b074bf0f6ee 544 PANTHER PTHR11101 504 542 7.0E-117 T 22-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 SMGD1_RS00985 4ee694becf5104d0a85d9b074bf0f6ee 544 PANTHER PTHR11101 41 429 7.0E-117 T 22-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 SMGD1_RS07565 2e175fa79d2aa50babd38d867e92aa4e 67 Pfam PF05545 Cbb3-type cytochrome oxidase component FixQ 2 52 1.2E-13 T 22-04-2016 IPR008621 Cbb3-type cytochrome oxidase component SMGD1_RS07565 2e175fa79d2aa50babd38d867e92aa4e 67 TIGRFAM TIGR02736 cbb3_Q_epsi: cytochrome c oxidase, cbb3-type, CcoQ subunit 8 62 2.7E-19 T 22-04-2016 IPR014107 Cytochrome c oxidase cbb3-type, CcoQ SMGD1_RS07800 da7adf48e955f56427fcdfd96b70d264 406 PANTHER PTHR11751 15 400 4.6E-195 T 22-04-2016 SMGD1_RS07800 da7adf48e955f56427fcdfd96b70d264 406 PANTHER PTHR11751:SF302 15 400 4.6E-195 T 22-04-2016 SMGD1_RS07800 da7adf48e955f56427fcdfd96b70d264 406 Gene3D G3DSA:3.90.1150.10 268 400 3.4E-42 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SMGD1_RS07800 da7adf48e955f56427fcdfd96b70d264 406 Gene3D G3DSA:3.40.640.10 47 267 3.2E-55 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SMGD1_RS07800 da7adf48e955f56427fcdfd96b70d264 406 SUPERFAMILY SSF53383 6 400 3.66E-101 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SMGD1_RS07800 da7adf48e955f56427fcdfd96b70d264 406 Pfam PF00155 Aminotransferase class I and II 34 393 6.4E-55 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SMGD1_RS02320 14daa73b788818a240e5c320c3d38673 120 Pfam PF04138 GtrA-like protein 6 116 1.5E-14 T 22-04-2016 IPR007267 GtrA-like protein GO:0000271|GO:0006810|GO:0016021 SMGD1_RS05915 af6785c245c151cc3126008efc86386f 1194 PANTHER PTHR30441:SF2 3 259 2.0E-15 T 22-04-2016 SMGD1_RS05915 af6785c245c151cc3126008efc86386f 1194 PANTHER PTHR30441 3 259 2.0E-15 T 22-04-2016 SMGD1_RS05915 af6785c245c151cc3126008efc86386f 1194 Gene3D G3DSA:3.30.1330.60 1139 1172 2.4E-5 T 22-04-2016 IPR006665 OmpA-like domain SMGD1_RS05915 af6785c245c151cc3126008efc86386f 1194 Gene3D G3DSA:3.30.1330.60 1014 1056 2.4E-5 T 22-04-2016 IPR006665 OmpA-like domain SMGD1_RS05915 af6785c245c151cc3126008efc86386f 1194 Pfam PF05359 Domain of Unknown Function (DUF748) 358 513 3.4E-13 T 22-04-2016 IPR008023 Protein of unknown function DUF748 SMGD1_RS05915 af6785c245c151cc3126008efc86386f 1194 Pfam PF05359 Domain of Unknown Function (DUF748) 799 945 7.0E-28 T 22-04-2016 IPR008023 Protein of unknown function DUF748 SMGD1_RS05915 af6785c245c151cc3126008efc86386f 1194 Pfam PF05359 Domain of Unknown Function (DUF748) 140 290 7.9E-16 T 22-04-2016 IPR008023 Protein of unknown function DUF748 SMGD1_RS05915 af6785c245c151cc3126008efc86386f 1194 Pfam PF05359 Domain of Unknown Function (DUF748) 583 733 1.4E-27 T 22-04-2016 IPR008023 Protein of unknown function DUF748 SMGD1_RS11310 28056c8504274bfe9db387854d711fe9 163 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 75 1.5E-10 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 SMGD1_RS11310 28056c8504274bfe9db387854d711fe9 163 Gene3D G3DSA:3.40.50.1240 1 160 1.4E-48 T 22-04-2016 IPR029033 Histidine phosphatase superfamily SMGD1_RS11310 28056c8504274bfe9db387854d711fe9 163 PANTHER PTHR23029 1 112 4.2E-18 T 22-04-2016 SMGD1_RS11310 28056c8504274bfe9db387854d711fe9 163 SUPERFAMILY SSF53254 1 158 1.86E-26 T 22-04-2016 IPR029033 Histidine phosphatase superfamily SMGD1_RS11310 28056c8504274bfe9db387854d711fe9 163 PANTHER PTHR23029:SF49 1 112 4.2E-18 T 22-04-2016 SMGD1_RS08550 93457b48ea8537c44be1a581bd125a57 257 Gene3D G3DSA:1.10.3480.10 2 201 1.4E-19 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone SMGD1_RS08550 93457b48ea8537c44be1a581bd125a57 257 SUPERFAMILY SSF89155 5 204 1.57E-28 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone SMGD1_RS08550 93457b48ea8537c44be1a581bd125a57 257 Pfam PF02613 Nitrate reductase delta subunit 45 168 1.8E-11 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone SMGD1_RS00430 2e4eedfbd87359e14ebb8a03eb452272 158 Pfam PF07603 Protein of unknown function (DUF1566) 45 154 9.6E-15 T 22-04-2016 IPR011460 Protein of unknown function DUF1566 SMGD1_RS02180 974d5ceca6374396760b47fcb9faa0ce 104 Pfam PF04341 Protein of unknown function, DUF485 11 99 6.2E-33 T 22-04-2016 IPR007436 Protein of unknown function DUF485 SMGD1_RS02180 974d5ceca6374396760b47fcb9faa0ce 104 PANTHER PTHR38598 2 104 2.8E-39 T 22-04-2016 SMGD1_RS01140 6f1d7983d890f3f0fbb708babe896f93 272 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 28 253 1.2E-37 T 22-04-2016 SMGD1_RS01140 6f1d7983d890f3f0fbb708babe896f93 272 SUPERFAMILY SSF53850 40 237 1.2E-15 T 22-04-2016 SMGD1_RS01140 6f1d7983d890f3f0fbb708babe896f93 272 Gene3D G3DSA:3.40.190.10 110 149 3.9E-8 T 22-04-2016 SMGD1_RS07515 5eb7b38cbd6dd832ae490a242844e8ff 130 SUPERFAMILY SSF52172 1 126 2.13E-28 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS07515 5eb7b38cbd6dd832ae490a242844e8ff 130 SMART SM00448 1 121 2.2E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS07515 5eb7b38cbd6dd832ae490a242844e8ff 130 Pfam PF00072 Response regulator receiver domain 3 121 1.2E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS07515 5eb7b38cbd6dd832ae490a242844e8ff 130 Gene3D G3DSA:3.40.50.2300 1 127 1.9E-30 T 22-04-2016 SMGD1_RS07515 5eb7b38cbd6dd832ae490a242844e8ff 130 PANTHER PTHR26402 1 127 1.4E-30 T 22-04-2016 SMGD1_RS10455 0da2343e3eeedb034e570a54cb280234 59 Pfam PF01541 GIY-YIG catalytic domain 2 53 2.3E-7 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily SMGD1_RS10455 0da2343e3eeedb034e570a54cb280234 59 SUPERFAMILY SSF82771 2 52 1.96E-5 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily SMGD1_RS10455 0da2343e3eeedb034e570a54cb280234 59 PANTHER PTHR34477 1 57 1.9E-16 T 22-04-2016 SMGD1_RS07950 5162b4f8f472de855839463bf6f088b3 344 PANTHER PTHR39431 124 344 2.4E-17 T 22-04-2016 SMGD1_RS10615 8e879591e7732e74b0f331f1c9d109df 261 PANTHER PTHR21535 80 261 3.6E-19 T 22-04-2016 SMGD1_RS10615 8e879591e7732e74b0f331f1c9d109df 261 Pfam PF01544 CorA-like Mg2+ transporter protein 8 253 4.1E-33 T 22-04-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 SMGD1_RS10615 8e879591e7732e74b0f331f1c9d109df 261 SUPERFAMILY SSF143865 8 191 4.32E-8 T 22-04-2016 SMGD1_RS10615 8e879591e7732e74b0f331f1c9d109df 261 SUPERFAMILY SSF144083 195 257 3.14E-15 T 22-04-2016 SMGD1_RS10615 8e879591e7732e74b0f331f1c9d109df 261 Gene3D G3DSA:1.20.58.340 185 256 1.6E-19 T 22-04-2016 SMGD1_RS10615 8e879591e7732e74b0f331f1c9d109df 261 Gene3D G3DSA:1.20.58.340 80 173 1.6E-7 T 22-04-2016 SMGD1_RS01805 47ddb6c3aacc94ad0439652b4844af17 129 Pfam PF03692 Putative zinc- or iron-chelating domain 18 120 2.3E-12 T 22-04-2016 IPR005358 Putative zinc- or iron-chelating domain containing protein SMGD1_RS07195 9facbd8b7fdabbd529458996144be549 111 SUPERFAMILY SSF46955 14 102 1.79E-7 T 22-04-2016 IPR009061 Putative DNA-binding domain SMGD1_RS07195 9facbd8b7fdabbd529458996144be549 111 Gene3D G3DSA:1.10.1660.10 14 104 1.3E-8 T 22-04-2016 SMGD1_RS07195 9facbd8b7fdabbd529458996144be549 111 Pfam PF13411 MerR HTH family regulatory protein 14 71 1.7E-5 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SMGD1_RS01085 a250557b3c299c728f1b772400f04d8a 425 Gene3D G3DSA:3.40.50.2300 14 131 1.6E-27 T 22-04-2016 SMGD1_RS01085 a250557b3c299c728f1b772400f04d8a 425 SUPERFAMILY SSF52172 14 167 4.98E-29 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS01085 a250557b3c299c728f1b772400f04d8a 425 PANTHER PTHR26402 16 151 3.3E-24 T 22-04-2016 SMGD1_RS01085 a250557b3c299c728f1b772400f04d8a 425 PANTHER PTHR26402 271 287 3.3E-24 T 22-04-2016 SMGD1_RS01085 a250557b3c299c728f1b772400f04d8a 425 Pfam PF00072 Response regulator receiver domain 18 124 1.0E-20 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS01085 a250557b3c299c728f1b772400f04d8a 425 SMART SM00448 16 127 1.4E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS08865 0adc9069716cb9e52a75395bde564b14 129 PANTHER PTHR33452 3 126 1.3E-16 T 22-04-2016 SMGD1_RS08865 0adc9069716cb9e52a75395bde564b14 129 PANTHER PTHR33452:SF1 3 126 1.3E-16 T 22-04-2016 SMGD1_RS08865 0adc9069716cb9e52a75395bde564b14 129 Pfam PF07681 DoxX 9 89 6.9E-19 T 22-04-2016 IPR032808 DoxX family SMGD1_RS01850 87801d9c37758bd4260e3fa9320dbf2f 121 Gene3D G3DSA:3.40.50.2300 2 118 3.7E-33 T 22-04-2016 SMGD1_RS01850 87801d9c37758bd4260e3fa9320dbf2f 121 SUPERFAMILY SSF52172 1 119 7.68E-32 T 22-04-2016 IPR011006 CheY-like superfamily SMGD1_RS01850 87801d9c37758bd4260e3fa9320dbf2f 121 PANTHER PTHR26402 2 120 3.0E-31 T 22-04-2016 SMGD1_RS01850 87801d9c37758bd4260e3fa9320dbf2f 121 Pfam PF00072 Response regulator receiver domain 4 115 2.0E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS01850 87801d9c37758bd4260e3fa9320dbf2f 121 SMART SM00448 2 115 8.0E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMGD1_RS07260 8bd8a40c7229ccd732c29ce35fdcf9d3 407 Pfam PF13487 HD domain 292 353 2.9E-14 T 22-04-2016 SMGD1_RS07260 8bd8a40c7229ccd732c29ce35fdcf9d3 407 Pfam PF01966 HD domain 29 149 3.2E-5 T 22-04-2016 IPR006674 HD domain SMGD1_RS07260 8bd8a40c7229ccd732c29ce35fdcf9d3 407 SUPERFAMILY SSF109604 231 400 1.94E-23 T 22-04-2016 SMGD1_RS07260 8bd8a40c7229ccd732c29ce35fdcf9d3 407 SUPERFAMILY SSF109604 27 187 1.23E-16 T 22-04-2016 SMGD1_RS07260 8bd8a40c7229ccd732c29ce35fdcf9d3 407 Gene3D G3DSA:1.10.3210.10 15 195 9.5E-14 T 22-04-2016 IPR006674 HD domain SMGD1_RS07260 8bd8a40c7229ccd732c29ce35fdcf9d3 407 Gene3D G3DSA:1.10.3210.10 226 391 1.5E-16 T 22-04-2016 IPR006674 HD domain SMGD1_RS14490 8f61eda99b1689335f7cbca86a48cbac 349 Pfam PF12639 DNase/tRNase domain of colicin-like bacteriocin 243 338 1.2E-21 T 22-04-2016 IPR024622 Colicin/pyocin, DNase domain GO:0004519 SMGD1_RS12350 3fb3d8198a01991db172a78087896f4a 179 Pfam PF03942 DTW domain 1 159 1.5E-30 T 22-04-2016 IPR005636 DTW SMGD1_RS12350 3fb3d8198a01991db172a78087896f4a 179 PANTHER PTHR21392 1 161 1.9E-21 T 22-04-2016 SMGD1_RS12350 3fb3d8198a01991db172a78087896f4a 179 SMART SM01144 1 164 6.3E-6 T 22-04-2016 IPR005636 DTW SMGD1_RS10540 f802bc4dc40bae96f2b476d519ec63cb 139 Pfam PF04773 FecR protein 53 137 1.0E-11 T 22-04-2016 IPR006860 FecR protein SMGD1_RS02240 8cb04045c207998dbcc6acc32e4f4c0f 245 Pfam PF06629 MltA-interacting protein MipA 25 243 3.6E-37 T 22-04-2016 IPR010583 MltA-interacting MipA SMGD1_RS02240 8cb04045c207998dbcc6acc32e4f4c0f 245 PANTHER PTHR38776 1 243 1.3E-37 T 22-04-2016 SMGD1_RS09860 db25775375de10fb3dd099c04cdf4095 410 Pfam PF04932 O-Antigen ligase 190 341 2.9E-21 T 22-04-2016 IPR007016 O-antigen ligase-related SMGD1_RS14465 d48a47c9df3c55a4f19a3ab571124de3 121 PANTHER PTHR33217 2 117 6.3E-48 T 22-04-2016 SMGD1_RS14465 d48a47c9df3c55a4f19a3ab571124de3 121 Pfam PF00872 Transposase, Mutator family 6 114 2.6E-22 T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 SMGD1_RS07510 612bdb32fe19d1154583d6b833e024e0 256 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 1 255 17.41 T 22-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 SMGD1_RS07510 612bdb32fe19d1154583d6b833e024e0 256 PANTHER PTHR30622:SF3 1 254 2.4E-90 T 22-04-2016 SMGD1_RS07510 612bdb32fe19d1154583d6b833e024e0 256 PANTHER PTHR30622 1 254 2.4E-90 T 22-04-2016 SMGD1_RS07510 612bdb32fe19d1154583d6b833e024e0 256 Pfam PF02673 Bacitracin resistance protein BacA 7 250 8.4E-70 T 22-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 SMGD1_RS00895 511e483c45ed735b5f09982c88c46dd7 126 SUPERFAMILY SSF46458 7 119 2.67E-18 T 22-04-2016 IPR009050 Globin-like SMGD1_RS00895 511e483c45ed735b5f09982c88c46dd7 126 Gene3D G3DSA:1.10.490.10 8 117 1.7E-14 T 22-04-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 SMGD1_RS04300 ee79f93863477bb54f0f4cbcba6e6310 117 SUPERFAMILY SSF46626 34 111 5.95E-9 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS04300 ee79f93863477bb54f0f4cbcba6e6310 117 Gene3D G3DSA:1.10.760.10 33 112 3.9E-12 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS13390 66c26a27da2fd4ee0d4e09cee7876f3b 540 Gene3D G3DSA:1.10.530.10 364 521 4.5E-32 T 22-04-2016 SMGD1_RS13390 66c26a27da2fd4ee0d4e09cee7876f3b 540 PANTHER PTHR21666 350 528 1.7E-20 T 22-04-2016 SMGD1_RS13390 66c26a27da2fd4ee0d4e09cee7876f3b 540 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 385 413 - T 22-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 SMGD1_RS13390 66c26a27da2fd4ee0d4e09cee7876f3b 540 Pfam PF01464 Transglycosylase SLT domain 377 474 1.2E-21 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 SMGD1_RS13390 66c26a27da2fd4ee0d4e09cee7876f3b 540 SUPERFAMILY SSF53955 378 520 3.52E-29 T 22-04-2016 IPR023346 Lysozyme-like domain SMGD1_RS00150 d22080dee1ac78858b97f094b708bd62 149 SUPERFAMILY SSF160387 59 128 2.17E-8 T 22-04-2016 SMGD1_RS03180 ccb7e0c8733fc4076c18401b332fd92f 62 Pfam PF13396 Phospholipase_D-nuclease N-terminal 15 48 2.1E-5 T 22-04-2016 IPR027379 Cardiolipin synthase N-terminal SMGD1_RS00735 3d0dd4ef780c57ad46d3e3b360963ad3 111 Gene3D G3DSA:1.10.760.10 21 107 6.2E-8 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS00735 3d0dd4ef780c57ad46d3e3b360963ad3 111 Pfam PF00034 Cytochrome c 25 88 2.5E-4 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS00735 3d0dd4ef780c57ad46d3e3b360963ad3 111 SUPERFAMILY SSF46626 5 58 3.92E-7 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS06990 6b36109665ffeb5662a26270d4a000be 213 Pfam PF13723 Beta-ketoacyl synthase, N-terminal domain 30 175 4.0E-22 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal SMGD1_RS12090 110b7571b6f11c40c8a849d5355926ad 175 SUPERFAMILY SSF50199 111 164 1.44E-5 T 22-04-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold SMGD1_RS11985 70bcfd35fadb62c14752ca9c364e4def 120 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 3 106 7.4E-9 T 22-04-2016 IPR017734 Type VI secretion system, lipoprotein SciN SMGD1_RS05540 2cb30e0baecf9fce0f0e16deceb8a3d0 126 Pfam PF13115 YtkA-like 28 108 3.7E-19 T 22-04-2016 IPR032693 YtkA-like domain SMGD1_RS06570 80c6dd2ae5cfaaa31dc631c5ed6b2e6e 161 PANTHER PTHR32089 1 122 4.1E-15 T 22-04-2016 SMGD1_RS06570 80c6dd2ae5cfaaa31dc631c5ed6b2e6e 161 PANTHER PTHR32089:SF52 1 122 4.1E-15 T 22-04-2016 SMGD1_RS06570 80c6dd2ae5cfaaa31dc631c5ed6b2e6e 161 Pfam PF08447 PAS fold 22 106 4.5E-10 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 SMGD1_RS06570 80c6dd2ae5cfaaa31dc631c5ed6b2e6e 161 SUPERFAMILY SSF55785 11 107 2.97E-25 T 22-04-2016 IPR000014 PAS domain SMGD1_RS06570 80c6dd2ae5cfaaa31dc631c5ed6b2e6e 161 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 15 104 2.2E-11 T 22-04-2016 IPR000014 PAS domain SMGD1_RS06570 80c6dd2ae5cfaaa31dc631c5ed6b2e6e 161 Gene3D G3DSA:3.30.450.20 11 106 3.2E-21 T 22-04-2016 SMGD1_RS00975 5a5b9e8cd2a48e84cae6a14ed247539a 169 Gene3D G3DSA:2.20.110.10 66 116 0.001 T 22-04-2016 SMGD1_RS00975 5a5b9e8cd2a48e84cae6a14ed247539a 169 SUPERFAMILY SSF82185 65 121 1.18E-6 T 22-04-2016 SMGD1_RS07865 44382098f3593e6a648b349cbb9a8dc7 588 Gene3D G3DSA:3.30.70.270 435 587 7.1E-49 T 22-04-2016 SMGD1_RS07865 44382098f3593e6a648b349cbb9a8dc7 588 SUPERFAMILY SSF55073 438 587 5.96E-45 T 22-04-2016 IPR029787 Nucleotide cyclase SMGD1_RS07865 44382098f3593e6a648b349cbb9a8dc7 588 PANTHER PTHR10799:SF750 257 434 7.5E-22 T 22-04-2016 SMGD1_RS07865 44382098f3593e6a648b349cbb9a8dc7 588 PANTHER PTHR10799 257 434 7.5E-22 T 22-04-2016 SMGD1_RS07865 44382098f3593e6a648b349cbb9a8dc7 588 Pfam PF14827 Double sensory domain of two-component sensor kinase 46 183 4.4E-8 T 22-04-2016 IPR029150 Double Cache domain 3 SMGD1_RS07865 44382098f3593e6a648b349cbb9a8dc7 588 Gene3D G3DSA:3.30.450.20 42 162 3.4E-5 T 22-04-2016 SMGD1_RS07865 44382098f3593e6a648b349cbb9a8dc7 588 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 429 587 3.4E-47 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS07865 44382098f3593e6a648b349cbb9a8dc7 588 PANTHER PTHR10799:SF750 466 585 7.5E-22 T 22-04-2016 SMGD1_RS07865 44382098f3593e6a648b349cbb9a8dc7 588 PANTHER PTHR10799:SF750 1 14 7.5E-22 T 22-04-2016 SMGD1_RS07865 44382098f3593e6a648b349cbb9a8dc7 588 PANTHER PTHR10799 466 585 7.5E-22 T 22-04-2016 SMGD1_RS07865 44382098f3593e6a648b349cbb9a8dc7 588 PANTHER PTHR10799 1 14 7.5E-22 T 22-04-2016 SMGD1_RS07865 44382098f3593e6a648b349cbb9a8dc7 588 SMART SM00267 422 588 1.6E-56 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS07865 44382098f3593e6a648b349cbb9a8dc7 588 Pfam PF00990 Diguanylate cyclase, GGDEF domain 434 583 1.6E-43 T 22-04-2016 IPR000160 GGDEF domain SMGD1_RS07865 44382098f3593e6a648b349cbb9a8dc7 588 SUPERFAMILY SSF103190 43 170 3.92E-9 T 22-04-2016 IPR029151 Periplasmic sensor domain-like SMGD1_RS11715 fde24ce8bee43f3017f39e55d2c45e76 150 SUPERFAMILY SSF160387 53 135 2.88E-6 T 22-04-2016 SMGD1_RS09760 3971f4cec2c8a1497cffa18a8fb846eb 71 Pfam PF03597 Cytochrome oxidase maturation protein cbb3-type 5 46 1.9E-16 T 22-04-2016 IPR004714 Cytochrome oxidase maturation protein cbb3-type SMGD1_RS09760 3971f4cec2c8a1497cffa18a8fb846eb 71 TIGRFAM TIGR00847 ccoS: cytochrome oxidase maturation protein, cbb3-type 6 52 5.3E-13 T 22-04-2016 IPR004714 Cytochrome oxidase maturation protein cbb3-type SMGD1_RS09475 fe40122eaf2542568398e6c0fad0bd90 284 Gene3D G3DSA:3.40.50.1100 31 104 6.9E-8 T 22-04-2016 SMGD1_RS09475 fe40122eaf2542568398e6c0fad0bd90 284 SUPERFAMILY SSF53686 10 279 4.16E-40 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SMGD1_RS09475 fe40122eaf2542568398e6c0fad0bd90 284 PIRSF PIRSF006278 3 282 2.1E-21 T 22-04-2016 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase SMGD1_RS09475 fe40122eaf2542568398e6c0fad0bd90 284 Gene3D G3DSA:3.40.50.1100 126 280 1.8E-11 T 22-04-2016 SMGD1_RS14315 b32a74f8b7e04e16d5d304ead9b36faf 253 Gene3D G3DSA:3.40.50.1820 45 238 4.0E-20 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SMGD1_RS14315 b32a74f8b7e04e16d5d304ead9b36faf 253 SUPERFAMILY SSF53474 41 251 2.57E-22 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SMGD1_RS14315 b32a74f8b7e04e16d5d304ead9b36faf 253 PANTHER PTHR12277 2 235 2.6E-24 T 22-04-2016 SMGD1_RS05505 5709e16444bba2dc61087d7ca3bc2b8f 420 Pfam PF13657 HipA N-terminal domain 8 109 9.9E-6 T 22-04-2016 IPR017508 HipA, N-terminal subdomain 1 SMGD1_RS05505 5709e16444bba2dc61087d7ca3bc2b8f 420 Pfam PF07804 HipA-like C-terminal domain 250 381 7.0E-21 T 22-04-2016 IPR012893 HipA-like, C-terminal SMGD1_RS05505 5709e16444bba2dc61087d7ca3bc2b8f 420 Pfam PF07805 HipA-like N-terminal domain 155 244 2.9E-9 T 22-04-2016 IPR012894 HipA, N-terminal subdomain 2 SMGD1_RS02885 2f5f58719cf492bd5d11155416c9a8ef 114 Gene3D G3DSA:3.30.780.10 39 111 8.9E-24 T 22-04-2016 IPR001950 Translation initiation factor SUI1 GO:0003743|GO:0006413 SMGD1_RS02885 2f5f58719cf492bd5d11155416c9a8ef 114 Pfam PF01253 Translation initiation factor SUI1 46 108 1.9E-10 T 22-04-2016 IPR001950 Translation initiation factor SUI1 GO:0003743|GO:0006413 SMGD1_RS02885 2f5f58719cf492bd5d11155416c9a8ef 114 PIRSF PIRSF037511 2 113 2.6E-27 T 22-04-2016 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 SMGD1_RS02885 2f5f58719cf492bd5d11155416c9a8ef 114 SUPERFAMILY SSF55159 39 111 2.62E-17 T 22-04-2016 IPR001950 Translation initiation factor SUI1 GO:0003743|GO:0006413 SMGD1_RS12540 2ce475ba675d8970a476c1eccd991564 74 Pfam PF09834 Predicted membrane protein (DUF2061) 9 60 1.8E-24 T 22-04-2016 IPR018638 Domain of unknown function DUF2061, membrane SMGD1_RS14455 52f2a2357705df0c5af25cbfcd2c926f 70 Pfam PF00872 Transposase, Mutator family 2 62 5.5E-10 T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 SMGD1_RS14455 52f2a2357705df0c5af25cbfcd2c926f 70 PANTHER PTHR33217 1 62 1.0E-27 T 22-04-2016 SMGD1_RS03250 8438e02cd32f6bf6bd70e294bc57bef1 464 SUPERFAMILY SSF103039 321 461 7.32E-24 T 22-04-2016 IPR028976 CheC-like domain SMGD1_RS03250 8438e02cd32f6bf6bd70e294bc57bef1 464 Pfam PF13690 Chemotaxis phosphatase CheX 357 449 1.8E-14 T 22-04-2016 IPR028051 Chemotaxis phosphatase CheX-like domain KEGG: 00231+3.-.-.-|KEGG: 00563+3.-.-.-|KEGG: 00983+3.-.-.- SMGD1_RS03250 8438e02cd32f6bf6bd70e294bc57bef1 464 Gene3D G3DSA:3.40.1550.10 321 439 1.8E-20 T 22-04-2016 IPR028976 CheC-like domain SMGD1_RS13990 c62a12ab2a1a34d51f71375e37ad7d37 468 SUPERFAMILY SSF116726 144 213 1.57E-8 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SMGD1_RS13990 c62a12ab2a1a34d51f71375e37ad7d37 468 Gene3D G3DSA:3.30.70.1450 146 213 4.6E-6 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SMGD1_RS02235 5bb8d53a0696c12fedd5978c81d91f41 253 Pfam PF04085 rod shape-determining protein MreC 160 249 3.8E-13 T 22-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 SMGD1_RS02235 5bb8d53a0696c12fedd5978c81d91f41 253 PANTHER PTHR34138 18 251 1.4E-12 T 22-04-2016 SMGD1_RS04225 438aae48ad2a112f90727011da625812 170 Pfam PF07377 Protein of unknown function (DUF1493) 48 123 1.3E-5 T 22-04-2016 IPR010862 Protein of unknown function DUF1493 SMGD1_RS00195 c9d1ad6c0aa5e976e5fa09e6fcc66721 159 Pfam PF13664 Domain of unknown function (DUF4149) 14 116 2.9E-14 T 22-04-2016 IPR025423 Domain of unknown function DUF4149 SMGD1_RS13610 7f642ed37f012ef9b51febdff594683f 96 Pfam PF14591 AF0941-like 4 75 1.6E-12 T 22-04-2016 IPR013502 Uncharacterised domain AF0941 SMGD1_RS10190 458fa27fb154407aa1a8bad3900002ff 886 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 3 46 9.9E-14 T 22-04-2016 IPR006847 Translation initiation factor IF-2, N-terminal SMGD1_RS10190 458fa27fb154407aa1a8bad3900002ff 886 SUPERFAMILY SSF52540 545 767 3.39E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS07210 e64baaf8998d22a72e7db312b8bf2fef 489 Pfam PF00474 Sodium:solute symporter family 33 431 5.6E-111 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 SMGD1_RS07210 e64baaf8998d22a72e7db312b8bf2fef 489 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 33 431 1.3E-99 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 SMGD1_RS07210 e64baaf8998d22a72e7db312b8bf2fef 489 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 4 486 1.0E-208 T 22-04-2016 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 SMGD1_RS07210 e64baaf8998d22a72e7db312b8bf2fef 489 PANTHER PTHR11819:SF148 2 466 8.7E-166 T 22-04-2016 SMGD1_RS07210 e64baaf8998d22a72e7db312b8bf2fef 489 PANTHER PTHR11819 2 466 8.7E-166 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 SMGD1_RS13615 b95be23eeeb00e611150bbec22b711f7 201 Gene3D G3DSA:1.10.260.40 131 170 1.8E-4 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SMGD1_RS02280 54171ff2ae66c58f782b2f7da3dc508d 320 Pfam PF00953 Glycosyl transferase family 4 71 215 1.2E-27 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SMGD1_RS02280 54171ff2ae66c58f782b2f7da3dc508d 320 PANTHER PTHR22926:SF3 3 313 1.0E-49 T 22-04-2016 SMGD1_RS02280 54171ff2ae66c58f782b2f7da3dc508d 320 PANTHER PTHR22926 3 313 1.0E-49 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SMGD1_RS07625 9297b9b8648e978236cd5775f0dac4a1 459 Pfam PF06097 Bacterial protein of unknown function (DUF945) 1 458 3.1E-15 T 22-04-2016 IPR010352 Protein of unknown function DUF945 SMGD1_RS10940 698bd827d3ef50798ce3bf9b8ec31ce2 199 Pfam PF02663 FmdE, Molybdenum formylmethanofuran dehydrogenase operon 43 193 2.1E-6 T 22-04-2016 IPR003814 Formylmethanofuran dehydrogenase, subunit E domain SMGD1_RS04815 b409edfc16a726ccf11fbff43d814a87 311 Pfam PF02470 MlaD protein 39 102 3.5E-6 T 22-04-2016 IPR003399 Mce/MlaD SMGD1_RS07300 d48084d0e046818173f988b9d763164f 270 Gene3D G3DSA:1.20.1080.10 23 262 5.2E-68 T 22-04-2016 IPR023271 Aquaporin-like SMGD1_RS07300 d48084d0e046818173f988b9d763164f 270 PANTHER PTHR30520 1 262 1.9E-70 T 22-04-2016 SMGD1_RS07300 d48084d0e046818173f988b9d763164f 270 Pfam PF01226 Formate/nitrite transporter 8 257 2.7E-67 T 22-04-2016 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 SMGD1_RS08125 8291cc929616fc93645cd2a24dbf92ae 398 SUPERFAMILY SSF56935 58 398 8.61E-6 T 22-04-2016 SMGD1_RS08200 f0576ecc2b1030f710769a003846c243 147 Gene3D G3DSA:1.10.490.10 24 146 6.2E-27 T 22-04-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 SMGD1_RS08200 f0576ecc2b1030f710769a003846c243 147 SUPERFAMILY SSF46458 28 145 1.22E-18 T 22-04-2016 IPR009050 Globin-like SMGD1_RS08200 f0576ecc2b1030f710769a003846c243 147 Pfam PF01152 Bacterial-like globin 28 139 1.6E-19 T 22-04-2016 IPR001486 Truncated hemoglobin GO:0019825 SMGD1_RS14425 598ec9e4d722a8ccfe70e3cc4835a4af 2504 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 1689 1763 5.7E-4 T 22-04-2016 IPR010221 VCBS repeat SMGD1_RS14425 598ec9e4d722a8ccfe70e3cc4835a4af 2504 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 2053 2145 1.4E-16 T 22-04-2016 IPR010221 VCBS repeat SMGD1_RS14425 598ec9e4d722a8ccfe70e3cc4835a4af 2504 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 1829 1903 2.8E-6 T 22-04-2016 IPR010221 VCBS repeat SMGD1_RS09110 90f3ffb18ed8ee38c6787357e83eb97a 283 Pfam PF08808 RES domain 64 243 7.2E-6 T 22-04-2016 IPR014914 RES domain SMGD1_RS03020 a2d25f93428a0d8a2956403fa8ad00e2 159 Pfam PF07603 Protein of unknown function (DUF1566) 44 156 4.7E-30 T 22-04-2016 IPR011460 Protein of unknown function DUF1566 SMGD1_RS14140 ab8ed7e678a3a95ee51e6489031bfb2c 468 Pfam PF11074 Domain of unknown function(DUF2779) 270 394 8.7E-44 T 22-04-2016 IPR021301 Domain of unknown functionDUF2779 SMGD1_RS13600 e0755737883e095e0dc79a9f4fce6b73 260 Gene3D G3DSA:2.50.20.10 19 258 8.8E-68 T 22-04-2016 SMGD1_RS13600 e0755737883e095e0dc79a9f4fce6b73 260 Pfam PF17131 Outer membrane lipoprotein-sorting protein 67 258 2.2E-57 T 22-04-2016 IPR033399 Putative outer membrane lipoprotein-sorting protein SMGD1_RS05805 6f26e773e8546af6c20104541319900a 143 Gene3D G3DSA:2.40.33.20 23 142 3.5E-10 T 22-04-2016 IPR015808 Molybdenum cofactor sulfurase, C-terminal-like SMGD1_RS05805 6f26e773e8546af6c20104541319900a 143 SUPERFAMILY SSF50800 16 142 1.62E-14 T 22-04-2016 IPR011037 Pyruvate kinase-like, insert domain SMGD1_RS03945 50066582228e87248307064cf0cc1545 168 Pfam PF07603 Protein of unknown function (DUF1566) 49 161 5.5E-26 T 22-04-2016 IPR011460 Protein of unknown function DUF1566 SMGD1_RS12050 42f286292ad5ef8b4d04771a71ce81a8 114 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 81 108 1.5E-8 T 22-04-2016 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 SMGD1_RS12050 42f286292ad5ef8b4d04771a71ce81a8 114 SUPERFAMILY SSF57716 81 111 4.99E-6 T 22-04-2016 SMGD1_RS12365 8914874640ab911aa70f8e3ca755b6aa 127 SUPERFAMILY SSF47175 25 122 2.06E-5 T 22-04-2016 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 SMGD1_RS04530 b08ba3e88fdac542632fe433f660c925 234 Pfam PF04773 FecR protein 57 146 3.7E-11 T 22-04-2016 IPR006860 FecR protein SMGD1_RS07155 47bd103ad0317f1a9d6bee27b2b71ab7 401 SUPERFAMILY SSF103473 13 399 2.09E-26 T 22-04-2016 IPR020846 Major facilitator superfamily domain SMGD1_RS07155 47bd103ad0317f1a9d6bee27b2b71ab7 401 Pfam PF07690 Major Facilitator Superfamily 234 395 1.2E-8 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SMGD1_RS07155 47bd103ad0317f1a9d6bee27b2b71ab7 401 Gene3D G3DSA:1.20.1250.20 234 400 5.0E-10 T 22-04-2016 SMGD1_RS07155 47bd103ad0317f1a9d6bee27b2b71ab7 401 Gene3D G3DSA:1.20.1250.20 15 207 1.7E-11 T 22-04-2016 SMGD1_RS07155 47bd103ad0317f1a9d6bee27b2b71ab7 401 PANTHER PTHR23526 6 399 1.8E-24 T 22-04-2016 SMGD1_RS06595 253413bafa5de7d2b9c627cfdaa58c12 422 Gene3D G3DSA:2.40.160.10 22 421 5.0E-27 T 22-04-2016 IPR023614 Porin domain SMGD1_RS10440 c6b0b366d9214669aaa1707a7b248f3c 316 PANTHER PTHR31367:SF5 6 293 2.4E-94 T 22-04-2016 SMGD1_RS10440 c6b0b366d9214669aaa1707a7b248f3c 316 Pfam PF06189 5'-nucleotidase 45 309 3.5E-104 T 22-04-2016 IPR010394 5-nucleotidase GO:0000166|GO:0000287|GO:0005737|GO:0008253|GO:0009117 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|Reactome: REACT_1698 SMGD1_RS10440 c6b0b366d9214669aaa1707a7b248f3c 316 PANTHER PTHR31367 6 293 2.4E-94 T 22-04-2016 SMGD1_RS00725 fdf98ec54c6ee0d93d532a62d5a50a5c 154 Gene3D G3DSA:3.30.300.20 30 125 3.0E-21 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta SMGD1_RS00725 fdf98ec54c6ee0d93d532a62d5a50a5c 154 Pfam PF02566 OsmC-like protein 29 120 1.2E-10 T 22-04-2016 IPR003718 OsmC/Ohr family SMGD1_RS00725 fdf98ec54c6ee0d93d532a62d5a50a5c 154 SUPERFAMILY SSF82784 1 125 7.85E-23 T 22-04-2016 IPR003718 OsmC/Ohr family SMGD1_RS03475 2cec632513f149dd42c7678deb30bcee 618 SUPERFAMILY SSF56935 36 618 3.19E-35 T 22-04-2016 SMGD1_RS03475 2cec632513f149dd42c7678deb30bcee 618 Gene3D G3DSA:2.170.130.10 38 155 5.1E-10 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMGD1_RS03475 2cec632513f149dd42c7678deb30bcee 618 Gene3D G3DSA:2.40.170.20 156 618 3.7E-17 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SMGD1_RS03475 2cec632513f149dd42c7678deb30bcee 618 Pfam PF07715 TonB-dependent Receptor Plug Domain 39 146 1.0E-4 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SMGD1_RS08155 9a15f1b13a80b8224f194e5c70407e10 170 Pfam PF09624 Protein of unknown function (DUF2393) 27 169 5.5E-37 T 22-04-2016 IPR013417 Conserved hypothetical protein CHP02588 SMGD1_RS09185 7df26d3ed15252abe6e865096e20ac16 612 Gene3D G3DSA:2.40.10.220 485 560 8.8E-5 T 22-04-2016 SMGD1_RS09185 7df26d3ed15252abe6e865096e20ac16 612 Pfam PF07238 PilZ domain 487 594 1.6E-4 T 22-04-2016 IPR009875 PilZ domain GO:0035438 SMGD1_RS06580 e6c6fdaac15b457b17083bf8b6b64e2d 251 Pfam PF04338 Protein of unknown function, DUF481 37 251 4.2E-34 T 22-04-2016 IPR007433 Protein of unknown function DUF481 SMGD1_RS02135 07aa6bc3154c7f4e8f916808d696f543 102 Pfam PF01909 Nucleotidyltransferase domain 26 98 6.3E-8 T 22-04-2016 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 SMGD1_RS02135 07aa6bc3154c7f4e8f916808d696f543 102 Gene3D G3DSA:3.30.460.10 1 101 4.4E-15 T 22-04-2016 SMGD1_RS02135 07aa6bc3154c7f4e8f916808d696f543 102 SUPERFAMILY SSF81301 2 84 1.06E-11 T 22-04-2016 SMGD1_RS14285 3b4b37cb4685e9397aef870d5b519437 339 Pfam PF03739 Predicted permease YjgP/YjgQ family 6 326 2.2E-33 T 22-04-2016 IPR005495 Permease LptG/LptF-related GO:0016021 SMGD1_RS14285 3b4b37cb4685e9397aef870d5b519437 339 PANTHER PTHR33529 1 224 5.9E-24 T 22-04-2016 SMGD1_RS04270 9a00de0560bdffc1b1ee0acc79891fec 147 Pfam PF13682 Chemoreceptor zinc-binding domain 17 78 2.6E-7 T 22-04-2016 IPR025991 Chemoreceptor zinc-binding domain UniPathway: UPA00599 SMGD1_RS06940 a36f8b26b196ba41fc4272d89875bed5 303 Gene3D G3DSA:3.40.50.360 1 202 3.2E-13 T 22-04-2016 IPR029039 Flavoprotein-like domain SMGD1_RS06940 a36f8b26b196ba41fc4272d89875bed5 303 SUPERFAMILY SSF52218 2 42 4.66E-13 T 22-04-2016 IPR029039 Flavoprotein-like domain SMGD1_RS06940 a36f8b26b196ba41fc4272d89875bed5 303 SUPERFAMILY SSF52218 71 202 4.66E-13 T 22-04-2016 IPR029039 Flavoprotein-like domain SMGD1_RS02025 3bd348a4052780b7cfef1d2b85443ade 535 TIGRFAM TIGR00702 TIGR00702: YcaO-type kinase domain 10 389 1.1E-67 T 22-04-2016 IPR003776 YcaO-like domain SMGD1_RS02025 3bd348a4052780b7cfef1d2b85443ade 535 Pfam PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding 57 376 1.7E-60 T 22-04-2016 IPR003776 YcaO-like domain SMGD1_RS02345 6e35c381be96633791c27717dda8cc7e 79 Pfam PF04138 GtrA-like protein 2 72 4.2E-9 T 22-04-2016 IPR007267 GtrA-like protein GO:0000271|GO:0006810|GO:0016021 SMGD1_RS13765 35e5b85dac6c40f80f43dbe9250c49f4 397 Pfam PF03573 outer membrane porin, OprD family 90 322 1.7E-13 T 22-04-2016 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 SMGD1_RS13765 35e5b85dac6c40f80f43dbe9250c49f4 397 Gene3D G3DSA:2.40.160.10 36 397 9.3E-28 T 22-04-2016 IPR023614 Porin domain SMGD1_RS11505 c0b71e7de8abe3ef27155188abf93487 266 Gene3D G3DSA:1.25.40.10 180 250 3.3E-4 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS11505 c0b71e7de8abe3ef27155188abf93487 266 Pfam PF12895 Anaphase-promoting complex, cyclosome, subunit 3 181 244 9.9E-7 T 22-04-2016 SMGD1_RS11505 c0b71e7de8abe3ef27155188abf93487 266 SUPERFAMILY SSF48452 181 257 2.11E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS01800 35b7013192712c2559fd7d950e7118b5 428 SUPERFAMILY SSF48452 36 69 5.77E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS01800 35b7013192712c2559fd7d950e7118b5 428 SUPERFAMILY SSF48452 136 238 5.77E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS01800 35b7013192712c2559fd7d950e7118b5 428 SUPERFAMILY SSF48452 353 402 5.77E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS01800 35b7013192712c2559fd7d950e7118b5 428 Gene3D G3DSA:1.25.40.10 132 281 1.3E-15 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS01800 35b7013192712c2559fd7d950e7118b5 428 Gene3D G3DSA:1.25.40.10 322 410 1.3E-15 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS03985 7066ee364451e27e5b045a4b8feaea49 149 Pfam PF06271 RDD family 17 142 1.6E-19 T 22-04-2016 IPR010432 RDD SMGD1_RS10230 8dadd1b0e06cfb4f303d0cde6a22a865 129 Pfam PF14568 SMI1-KNR4 cell-wall 12 125 1.5E-15 T 22-04-2016 SMGD1_RS10230 8dadd1b0e06cfb4f303d0cde6a22a865 129 SMART SM00860 9 127 2.0E-4 T 22-04-2016 IPR018958 SMI1/KNR4-like domain SMGD1_RS10230 8dadd1b0e06cfb4f303d0cde6a22a865 129 SUPERFAMILY SSF160631 10 127 1.96E-11 T 22-04-2016 SMGD1_RS02250 0ee88498c000e2c99106de38e57d023a 143 Gene3D G3DSA:3.90.870.10 19 112 1.1E-5 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain SMGD1_RS02250 0ee88498c000e2c99106de38e57d023a 143 SUPERFAMILY SSF55821 3 106 3.97E-8 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain SMGD1_RS09420 e225237f12aac0f523556070bb787801 80 Gene3D G3DSA:1.10.260.40 21 68 1.0E-6 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SMGD1_RS07535 f5877fa60e5074822897424da4d85538 125 Pfam PF02050 Flagellar FliJ protein 2 118 1.4E-17 T 22-04-2016 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 SMGD1_RS03445 6a42d498a32dd349ffb8f04a0928193a 236 Pfam PF03502 Nucleoside-specific channel-forming protein, Tsx 46 212 2.5E-11 T 22-04-2016 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 SMGD1_RS03445 6a42d498a32dd349ffb8f04a0928193a 236 Gene3D G3DSA:2.40.230.20 13 236 1.5E-41 T 22-04-2016 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 SMGD1_RS03445 6a42d498a32dd349ffb8f04a0928193a 236 SUPERFAMILY SSF111364 17 236 1.7E-32 T 22-04-2016 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 SMGD1_RS07880 091a1dd80629fd8d3c043adecba38110 589 Pfam PF09491 AlwI restriction endonuclease 107 532 2.4E-89 T 22-04-2016 IPR018573 Restriction endonuclease, type II, AlwI SMGD1_RS13335 26b4c3780c9728c632c632981bc7f271 285 PANTHER PTHR18968 6 279 2.3E-96 T 22-04-2016 SMGD1_RS13335 26b4c3780c9728c632c632981bc7f271 285 PANTHER PTHR18968:SF89 6 279 2.3E-96 T 22-04-2016 SMGD1_RS13335 26b4c3780c9728c632c632981bc7f271 285 SUPERFAMILY SSF52518 14 255 4.47E-69 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SMGD1_RS13335 26b4c3780c9728c632c632981bc7f271 285 Gene3D G3DSA:3.40.50.970 15 221 1.8E-73 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SMGD1_RS13335 26b4c3780c9728c632c632981bc7f271 285 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 51 198 4.8E-35 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 SMGD1_RS06140 2cb2ef16b8753a253ec54807458bc9cd 493 Pfam PF11853 Protein of unknown function (DUF3373) 1 493 4.0E-149 T 22-04-2016 IPR021803 Protein of unknown function DUF3373 SMGD1_RS03715 7652813a3c284e7e913191ebba2d39c1 356 Pfam PF03739 Predicted permease YjgP/YjgQ family 5 346 7.9E-30 T 22-04-2016 IPR005495 Permease LptG/LptF-related GO:0016021 SMGD1_RS01190 8b5ae36cecc55fdff156f30f804071b2 161 Pfam PF06146 Phosphate-starvation-inducible E 70 137 4.3E-19 T 22-04-2016 IPR020948 Phosphate-starvation-induced PsiE-like SMGD1_RS13720 1e4e5b7d89a6db899b3ecc85fc9f4773 115 Pfam PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter 29 76 3.7E-10 T 22-04-2016 IPR032820 Putative F0F1-ATPase subunit, Ca2+/Mg2+ transporter SMGD1_RS10955 3f07ab50c71db688f2a3b43f09112256 373 SUPERFAMILY SSF53756 132 372 2.13E-13 T 22-04-2016 SMGD1_RS10215 a99287f148ebb8dbc2d006db116da684 148 SUPERFAMILY SSF53300 5 112 2.22E-5 T 22-04-2016 IPR002035 von Willebrand factor, type A SMGD1_RS14040 d9012c111fc0c7c70cec4d1d48788535 375 Pfam PF01618 MotA/TolQ/ExbB proton channel family 60 140 4.2E-8 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 SMGD1_RS03530 26ac93ef7c37e1fa4fea7b7b8ab2687c 305 PANTHER PTHR34856 23 290 1.3E-14 T 22-04-2016 SMGD1_RS03530 26ac93ef7c37e1fa4fea7b7b8ab2687c 305 Pfam PF03916 Polysulphide reductase, NrfD 22 294 3.0E-24 T 22-04-2016 IPR005614 NrfD family SMGD1_RS09170 024f3ec2eadd6122afcb087c5e1439fa 349 Pfam PF01594 Domain of unknown function DUF20 5 336 5.0E-37 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like SMGD1_RS09170 024f3ec2eadd6122afcb087c5e1439fa 349 PANTHER PTHR21716 4 349 1.4E-34 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like SMGD1_RS09170 024f3ec2eadd6122afcb087c5e1439fa 349 PANTHER PTHR21716:SF13 4 349 1.4E-34 T 22-04-2016 SMGD1_RS00590 d495293926950d4bff1209e0aafd6a35 67 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 4 25 0.001 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal SMGD1_RS00625 271dc62764bed6191010768410d57f3b 124 PANTHER PTHR30432 1 108 5.1E-16 T 22-04-2016 SMGD1_RS00625 271dc62764bed6191010768410d57f3b 124 Gene3D G3DSA:1.10.10.10 2 112 1.5E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMGD1_RS00625 271dc62764bed6191010768410d57f3b 124 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 24 82 3.9E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMGD1_RS00625 271dc62764bed6191010768410d57f3b 124 SUPERFAMILY SSF46785 4 109 4.28E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMGD1_RS08415 76cc3b9cdcf3ffc94c9fc12acf51f861 74 Pfam PF16514 putative NADH-ubiquinone oxidoreductase chain E 1 73 5.8E-37 T 22-04-2016 IPR032424 Putative NADH-ubiquinone oxidoreductase chain E SMGD1_RS08070 7d5155aa987ae78d4ec8bf359367eb64 606 PANTHER PTHR10010:SF26 23 470 3.7E-49 T 22-04-2016 SMGD1_RS08070 7d5155aa987ae78d4ec8bf359367eb64 606 Pfam PF02690 Na+/Pi-cotransporter 33 172 6.8E-40 T 22-04-2016 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: REACT_15518 SMGD1_RS08070 7d5155aa987ae78d4ec8bf359367eb64 606 Pfam PF02690 Na+/Pi-cotransporter 199 283 1.7E-11 T 22-04-2016 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: REACT_15518 SMGD1_RS08070 7d5155aa987ae78d4ec8bf359367eb64 606 PANTHER PTHR10010 23 470 3.7E-49 T 22-04-2016 SMGD1_RS00420 eeebaaaf1d30adb4dbf3d8dc3f36ecc2 136 Pfam PF07603 Protein of unknown function (DUF1566) 23 132 2.0E-23 T 22-04-2016 IPR011460 Protein of unknown function DUF1566 SMGD1_RS07935 f57581f1d9a1bc61f349a774bfb347cc 104 SUPERFAMILY SSF54913 4 92 9.64E-5 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta SMGD1_RS03635 5adeb8c2c4aa33c45d3fbb11d67d4b8b 230 Pfam PF08761 dUTPase 4 183 3.2E-38 T 22-04-2016 IPR014871 dUTPase/dCTP pyrophosphatase KEGG: 00240+3.6.1.12 SMGD1_RS03635 5adeb8c2c4aa33c45d3fbb11d67d4b8b 230 SUPERFAMILY SSF101386 1 224 1.23E-65 T 22-04-2016 SMGD1_RS00780 246f6bf9b2cf7e047ec5fd38faa7d5e6 96 SUPERFAMILY SSF158752 8 94 3.92E-28 T 22-04-2016 SMGD1_RS00780 246f6bf9b2cf7e047ec5fd38faa7d5e6 96 Pfam PF09442 Domain of unknown function (DUF2018) 15 96 1.2E-27 T 22-04-2016 IPR018563 Protein of unknown function DUF2018 SMGD1_RS00780 246f6bf9b2cf7e047ec5fd38faa7d5e6 96 Gene3D G3DSA:1.10.3350.10 10 96 5.6E-18 T 22-04-2016 IPR023126 HP0242-like domain SMGD1_RS05665 10943b6ec99c23a5850f899a21431aff 102 SUPERFAMILY SSF46626 37 97 3.39E-9 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS08520 72c1225ee94f32c6da58f6007b24737b 154 Pfam PF04238 Protein of unknown function (DUF420) 20 151 7.7E-22 T 22-04-2016 IPR007352 Protein of unknown function DUF420 SMGD1_RS00815 f96dcb94aaadbb73ba2888ed895ad86c 162 Gene3D G3DSA:3.10.129.10 29 150 3.9E-29 T 22-04-2016 IPR029069 HotDog domain SMGD1_RS00815 f96dcb94aaadbb73ba2888ed895ad86c 162 SUPERFAMILY SSF54637 38 141 5.68E-22 T 22-04-2016 IPR029069 HotDog domain SMGD1_RS00815 f96dcb94aaadbb73ba2888ed895ad86c 162 Pfam PF03061 Thioesterase superfamily 64 132 4.4E-10 T 22-04-2016 IPR006683 Thioesterase domain SMGD1_RS13085 c306a56eca85fe8fed79f4ae2d56841c 139 Gene3D G3DSA:3.40.50.300 9 135 4.7E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS13085 c306a56eca85fe8fed79f4ae2d56841c 139 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 11 127 3.0E-25 T 22-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 SMGD1_RS13085 c306a56eca85fe8fed79f4ae2d56841c 139 SUPERFAMILY SSF52540 13 103 2.66E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS13085 c306a56eca85fe8fed79f4ae2d56841c 139 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 9 124 1.5E-23 T 22-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 SMGD1_RS12240 9c09ccf4dfa09056319346b54b825018 168 SUPERFAMILY SSF160387 66 146 2.07E-8 T 22-04-2016 SMGD1_RS00215 836e3b7d2f89555c47794e0615fc4973 71 Gene3D G3DSA:1.10.760.10 19 58 7.4E-4 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS00215 836e3b7d2f89555c47794e0615fc4973 71 SUPERFAMILY SSF46626 19 66 9.17E-9 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SMGD1_RS09665 6a25d0a07071130bbc40cfdedd3c24b4 68 SUPERFAMILY SSF101498 29 66 1.44E-8 T 22-04-2016 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 SMGD1_RS09665 6a25d0a07071130bbc40cfdedd3c24b4 68 Pfam PF04316 Anti-sigma-28 factor, FlgM 22 64 1.4E-8 T 22-04-2016 IPR031316 Anti-sigma-28 factor FlgM, C-terminal SMGD1_RS05950 ba331ab8ecbf6f76f09441ac0b0fa182 112 Pfam PF11948 Protein of unknown function (DUF3465) 19 112 2.1E-45 T 22-04-2016 IPR021856 Protein of unknown function DUF3465 SMGD1_RS07820 fd561ed496ae8b2b7f27331c4c4c2ebf 249 Pfam PF11306 Protein of unknown function (DUF3108) 19 154 3.1E-6 T 22-04-2016 IPR021457 Protein of unknown function DUF3108 SMGD1_RS12195 c7354a60f582734be14588df8d9efb52 205 Pfam PF03692 Putative zinc- or iron-chelating domain 30 96 1.2E-7 T 22-04-2016 IPR005358 Putative zinc- or iron-chelating domain containing protein SMGD1_RS08320 3312f4b01fdc5086ebe5efc42c4e1630 167 Pfam PF13618 Gluconate 2-dehydrogenase subunit 3 50 154 9.9E-9 T 22-04-2016 IPR027056 Gluconate 2-dehydrogenase subunit 3 KEGG: 00030+1.1.99.3|MetaCyc: PWY-7165 SMGD1_RS04070 42835add832fe4604530900294688a88 308 SUPERFAMILY SSF54523 7 103 3.61E-5 T 22-04-2016 SMGD1_RS04070 42835add832fe4604530900294688a88 308 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 22 1.1E-4 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site SMGD1_RS04635 ef6b51061c6ae592e6510442ef53737c 181 Pfam PF13505 Outer membrane protein beta-barrel domain 6 181 5.0E-14 T 22-04-2016 IPR027385 Outer membrane protein beta-barrel SMGD1_RS04635 ef6b51061c6ae592e6510442ef53737c 181 Gene3D G3DSA:2.40.160.20 8 181 4.0E-13 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 SMGD1_RS04635 ef6b51061c6ae592e6510442ef53737c 181 SUPERFAMILY SSF56925 17 181 4.71E-14 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 SMGD1_RS06790 5164843e3bbe464468a24e845100c8fe 249 TIGRFAM TIGR04219 OMP_w_GlyGly: outer membrane protein 2 249 2.0E-59 T 22-04-2016 IPR026387 Outer membrane protein SMGD1_RS05525 db36a71159c4a9117241ea5a43b6e247 63 Pfam PF09851 Short C-terminal domain 38 59 2.3E-6 T 22-04-2016 IPR018649 SHOCT domain SMGD1_RS04655 076c624d2a5c7ec8671b53590f3686a7 197 SUPERFAMILY SSF48452 12 63 2.18E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS04655 076c624d2a5c7ec8671b53590f3686a7 197 SUPERFAMILY SSF48452 160 183 2.18E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS04655 076c624d2a5c7ec8671b53590f3686a7 197 Gene3D G3DSA:1.25.40.10 11 80 7.6E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS04655 076c624d2a5c7ec8671b53590f3686a7 197 Gene3D G3DSA:1.25.40.10 153 182 7.6E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMGD1_RS03015 5f2e6f022922634195c2415fe7aeb046 400 Pfam PF07603 Protein of unknown function (DUF1566) 18 130 5.4E-23 T 22-04-2016 IPR011460 Protein of unknown function DUF1566 SMGD1_RS13170 d5f372e22518fb486554c892d822ef34 68 Pfam PF11381 Protein of unknown function (DUF3185) 8 64 2.2E-15 T 22-04-2016 IPR021521 Protein of unknown function DUF3185 SMGD1_RS07315 8ddbd54de7f75cdddf12a40fa7ed5f39 196 Pfam PF04143 Sulphur transport 43 180 4.6E-17 T 22-04-2016 IPR007272 Sulphur transport domain SMGD1_RS07315 8ddbd54de7f75cdddf12a40fa7ed5f39 196 PANTHER PTHR30574 9 190 6.4E-17 T 22-04-2016 SMGD1_RS07605 5e48a97925750f2e5463d73583221231 200 Pfam PF01810 LysE type translocator 16 196 3.0E-34 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 SMGD1_RS07605 5e48a97925750f2e5463d73583221231 200 PANTHER PTHR38825 1 199 2.9E-26 T 22-04-2016 SMGD1_RS09850 1be452ac15743f004aefad053aae6efb 328 Pfam PF13524 Glycosyl transferases group 1 239 320 2.9E-14 T 22-04-2016 SMGD1_RS02930 1d5aa299f710ff7dc368aab090f5d8a6 316 Gene3D G3DSA:2.130.10.10 28 315 3.1E-24 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 SMGD1_RS02930 1d5aa299f710ff7dc368aab090f5d8a6 316 SUPERFAMILY SSF50978 29 315 1.59E-24 T 22-04-2016 IPR017986 WD40-repeat-containing domain GO:0005515 SMGD1_RS04240 199a442ed324425390db0b7546d2eb1f 111 Gene3D G3DSA:1.10.287.80 51 87 5.2E-4 T 22-04-2016 SMGD1_RS02075 3aa2842ae82c9376f1e8f9485c8d2c6e 438 SUPERFAMILY SSF69635 65 175 2.51E-5 T 22-04-2016 SMGD1_RS08635 5030a0a50e17050e62540525af71ad35 384 Pfam PF04773 FecR protein 54 156 2.7E-12 T 22-04-2016 IPR006860 FecR protein SMGD1_RS08115 d202632e221d3e3280f91172b9ef72f5 441 Pfam PF13372 Alginate export 73 428 1.5E-34 T 22-04-2016 IPR025388 Alginate export domain UniPathway: UPA00286 SMGD1_RS06980 132c8a2d4d4b93999c3354e880601376 318 Pfam PF02169 LPP20 lipoprotein 18 110 4.9E-10 T 22-04-2016 IPR024952 Lipoprotein LPP20-like SMGD1_RS13730 1921ff13331199225f503464625e014d 297 SUPERFAMILY SSF74653 196 294 1.02E-6 T 22-04-2016 SMGD1_RS05255 dcad6687721cc24794046cdbd3a5c504 668 Pfam PF01973 Protein of unknown function DUF115 270 425 2.1E-24 T 22-04-2016 IPR002826 6-hydroxymethylpterin diphosphokinase MptE-like SMGD1_RS10820 aa438ad983c7f141e48df0d9311fdfa1 472 Pfam PF13584 Oxygen tolerance 13 404 7.4E-48 T 22-04-2016 IPR025738 Aerotolerance-related protein BatD SMGD1_RS03165 ab0f01fbd518a2e1851c0b6ceb8bf33b 170 Pfam PF04390 Lipopolysaccharide-assembly 7 157 3.8E-7 T 22-04-2016 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 SMGD1_RS05500 ca656ec88178b0bf8f2cc36fa257190c 39 SUPERFAMILY SSF55874 3 38 1.23E-7 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS05500 ca656ec88178b0bf8f2cc36fa257190c 39 Gene3D G3DSA:3.30.565.10 3 38 1.9E-7 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMGD1_RS14025 bad35b9ae11695a36282803b90ed3a38 135 SUPERFAMILY SSF47175 21 133 3.09E-5 T 22-04-2016 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 SMGD1_RS07230 3ada7069b77194ad2342abd769facc65 256 Pfam PF13795 HupE / UreJ protein 38 192 3.0E-49 T 22-04-2016 IPR032809 Putative HupE/UreJ protein SMGD1_RS04810 dbee505147ed87f6de34c82310f5d029 117 Gene3D G3DSA:3.40.50.300 93 101 3.4E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS04810 dbee505147ed87f6de34c82310f5d029 117 Gene3D G3DSA:3.40.50.300 2 60 3.4E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMGD1_RS10750 d5c2f27dc9d7d54bd767c5c15d351975 367 Pfam PF13584 Oxygen tolerance 31 268 3.7E-18 T 22-04-2016 IPR025738 Aerotolerance-related protein BatD SMGD1_RS08530 489ba56d5e0509d230cb60e54aea4324 535 Pfam PF11853 Protein of unknown function (DUF3373) 4 535 1.5E-148 T 22-04-2016 IPR021803 Protein of unknown function DUF3373 SMGD1_RS06635 620e903ba0bfe933ae37379120a958df 68 Pfam PF04324 BFD-like [2Fe-2S] binding domain 3 43 2.1E-7 T 22-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain