locus-tag class description FJR48_RS00005 PF11638 DnaA N-terminal domain FJR48_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix FJR48_RS00005 PF00308 Bacterial dnaA protein FJR48_RS00010 PF17155 Gammaproteobacterial periplasmic sensor domain FJR48_RS00010 PF00990 Diguanylate cyclase, GGDEF domain FJR48_RS00015 PF02075 Crossover junction endodeoxyribonuclease RuvC FJR48_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJR48_RS00020 PF09308 LuxQ, periplasmic FJR48_RS00020 PF00072 Response regulator receiver domain FJR48_RS00020 PF00512 His Kinase A (phospho-acceptor) domain FJR48_RS00025 PF00285 Citrate synthase, C-terminal domain FJR48_RS00030 PF00085 Thioredoxin FJR48_RS00035 PF17820 PDZ domain FJR48_RS00035 PF13180 PDZ domain FJR48_RS00040 PF02623 FliW protein FJR48_RS00050 PF03477 ATP cone domain FJR48_RS00050 PF02867 Ribonucleotide reductase, barrel domain FJR48_RS00050 PF00317 Ribonucleotide reductase, all-alpha domain FJR48_RS00055 PF10397 Adenylosuccinate lyase C-terminus FJR48_RS00055 PF00206 Lyase FJR48_RS00060 PF00849 RNA pseudouridylate synthase FJR48_RS00070 PF04055 Radical SAM superfamily FJR48_RS00080 PF00977 Histidine biosynthesis protein FJR48_RS00090 PF00398 Ribosomal RNA adenine dimethylase FJR48_RS00095 PF00753 Metallo-beta-lactamase superfamily FJR48_RS00095 PF17770 Ribonuclease J C-terminal domain FJR48_RS00095 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain FJR48_RS00100 PF01227 GTP cyclohydrolase I FJR48_RS00105 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FJR48_RS00105 PF18269 T3SS EscN ATPase C-terminal domain FJR48_RS00135 PF17768 RecJ OB domain FJR48_RS00135 PF02272 DHHA1 domain FJR48_RS00135 PF01368 DHH family FJR48_RS00140 PF06418 CTP synthase N-terminus FJR48_RS00140 PF00117 Glutamine amidotransferase class-I FJR48_RS00145 PF00999 Sodium/hydrogen exchanger family FJR48_RS00145 PF02254 TrkA-N domain FJR48_RS00150 PF00156 Phosphoribosyl transferase domain FJR48_RS00155 PF01765 Ribosome recycling factor FJR48_RS00160 PF03840 Preprotein translocase SecG subunit FJR48_RS00170 PF00005 ABC transporter FJR48_RS00175 PF00950 ABC 3 transport family FJR48_RS00185 PF02464 Competence-damaged protein FJR48_RS00185 PF00994 Probable molybdopterin binding domain FJR48_RS00185 PF18146 Damage-inducible protein CinA KH domain FJR48_RS00190 PF17792 ThiD2 family FJR48_RS00190 PF02581 Thiamine monophosphate synthase FJR48_RS00195 PF01027 Inhibitor of apoptosis-promoting Bax1 FJR48_RS00230 PF00586 AIR synthase related protein, N-terminal domain FJR48_RS00230 PF02769 AIR synthase related protein, C-terminal domain FJR48_RS00240 PF17284 Spermidine synthase tetramerisation domain FJR48_RS00245 PF01121 Dephospho-CoA kinase FJR48_RS00250 PF01678 Diaminopimelate epimerase FJR48_RS00255 PF03462 PCRF domain FJR48_RS00255 PF00472 RF-1 domain FJR48_RS00260 PF01649 Ribosomal protein S20 FJR48_RS00265 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FJR48_RS00265 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FJR48_RS00265 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FJR48_RS00265 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FJR48_RS00270 PF01252 Signal peptidase (SPase) II FJR48_RS00275 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FJR48_RS00275 PF05697 Bacterial trigger factor protein (TF) FJR48_RS00275 PF05698 Bacterial trigger factor protein (TF) C-terminus FJR48_RS00280 PF00574 Clp protease FJR48_RS00290 PF01327 Polypeptide deformylase FJR48_RS00300 PF13335 Magnesium chelatase, subunit ChlI C-terminal FJR48_RS00300 PF01078 Magnesium chelatase, subunit ChlI FJR48_RS00305 PF01894 Uncharacterised protein family UPF0047 FJR48_RS00310 PF13419 Haloacid dehalogenase-like hydrolase FJR48_RS00315 PF02607 B12 binding domain FJR48_RS00315 PF02310 B12 binding domain FJR48_RS00315 PF02965 Vitamin B12 dependent methionine synthase, activation domain FJR48_RS00315 PF00809 Pterin binding enzyme FJR48_RS00315 PF02574 Homocysteine S-methyltransferase FJR48_RS00330 PF13746 4Fe-4S dicluster domain FJR48_RS00330 PF12801 4Fe-4S binding domain FJR48_RS00330 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase FJR48_RS00335 PF03601 Conserved hypothetical protein 698 FJR48_RS00350 PF00075 RNase H FJR48_RS00355 PF14622 Ribonuclease-III-like FJR48_RS00355 PF00035 Double-stranded RNA binding motif FJR48_RS00360 PF01264 Chorismate synthase FJR48_RS00370 PF00174 Oxidoreductase molybdopterin binding domain FJR48_RS00375 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FJR48_RS00375 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP FJR48_RS00410 PF01967 MoaC family FJR48_RS00415 PF12804 MobA-like NTP transferase domain FJR48_RS00420 PF00330 Aconitase family (aconitate hydratase) FJR48_RS00430 PF00266 Aminotransferase class-V FJR48_RS00435 PF04324 BFD-like [2Fe-2S] binding domain FJR48_RS00435 PF01106 NifU-like domain FJR48_RS00435 PF01592 NifU-like N terminal domain FJR48_RS00450 PF17151 Periplasmic sensor domain FJR48_RS00450 PF00990 Diguanylate cyclase, GGDEF domain FJR48_RS00470 PF00005 ABC transporter FJR48_RS00490 PF04055 Radical SAM superfamily FJR48_RS00490 PF02310 B12 binding domain FJR48_RS00495 PF00990 Diguanylate cyclase, GGDEF domain FJR48_RS00495 PF03707 Bacterial signalling protein N terminal repeat FJR48_RS00495 PF00563 EAL domain FJR48_RS00505 PF00672 HAMP domain FJR48_RS00505 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FJR48_RS00505 PF17202 Single cache domain 3 FJR48_RS00530 PF08148 DSHCT (NUC185) domain FJR48_RS00530 PF00271 Helicase conserved C-terminal domain FJR48_RS00530 PF00270 DEAD/DEAH box helicase FJR48_RS00535 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FJR48_RS00535 PF00672 HAMP domain FJR48_RS00540 PF00300 Histidine phosphatase superfamily (branch 1) FJR48_RS00545 PF02654 Cobalamin-5-phosphate synthase FJR48_RS00550 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase FJR48_RS00560 PF07685 CobB/CobQ-like glutamine amidotransferase domain FJR48_RS00560 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FJR48_RS00590 PF01032 FecCD transport family FJR48_RS00595 PF00005 ABC transporter FJR48_RS00600 PF01497 Periplasmic binding protein FJR48_RS00605 PF07715 TonB-dependent Receptor Plug Domain FJR48_RS00605 PF00593 TonB dependent receptor FJR48_RS00620 PF04960 Glutaminase FJR48_RS00640 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase FJR48_RS00640 PF13288 DXP reductoisomerase C-terminal domain FJR48_RS00640 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain FJR48_RS00645 PF00814 Glycoprotease family FJR48_RS00650 PF08534 Redoxin FJR48_RS00660 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain FJR48_RS00665 PF01313 Bacterial export proteins, family 3 FJR48_RS00670 PF02621 Menaquinone biosynthesis FJR48_RS00675 PF00990 Diguanylate cyclase, GGDEF domain FJR48_RS00675 PF03707 Bacterial signalling protein N terminal repeat FJR48_RS00675 PF00563 EAL domain FJR48_RS00700 PF00154 recA bacterial DNA recombination protein FJR48_RS00705 PF00113 Enolase, C-terminal TIM barrel domain FJR48_RS00705 PF03952 Enolase, N-terminal domain FJR48_RS00720 PF00571 CBS domain FJR48_RS00720 PF03448 MgtE intracellular N domain FJR48_RS00720 PF01769 Divalent cation transporter FJR48_RS00725 PF00571 CBS domain FJR48_RS00725 PF03471 Transporter associated domain FJR48_RS00725 PF01595 Cyclin M transmembrane N-terminal domain FJR48_RS00730 PF17200 Single Cache domain 2 FJR48_RS00730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FJR48_RS00730 PF00672 HAMP domain FJR48_RS00750 PF00733 Asparagine synthase FJR48_RS00750 PF13537 Glutamine amidotransferase domain FJR48_RS00770 PF00999 Sodium/hydrogen exchanger family FJR48_RS00770 PF02254 TrkA-N domain FJR48_RS00770 PF02080 TrkA-C domain FJR48_RS00775 PF06968 Biotin and Thiamin Synthesis associated domain FJR48_RS00775 PF04055 Radical SAM superfamily FJR48_RS00785 PF01131 DNA topoisomerase FJR48_RS00785 PF01751 Toprim domain FJR48_RS00785 PF01396 Topoisomerase DNA binding C4 zinc finger FJR48_RS00790 PF00700 Bacterial flagellin C-terminal helical region FJR48_RS00790 PF00669 Bacterial flagellin N-terminal helical region FJR48_RS00790 PF07196 Flagellin hook IN motif FJR48_RS00795 PF00700 Bacterial flagellin C-terminal helical region FJR48_RS00795 PF00669 Bacterial flagellin N-terminal helical region FJR48_RS00795 PF07196 Flagellin hook IN motif FJR48_RS00800 PF00669 Bacterial flagellin N-terminal helical region FJR48_RS00800 PF07196 Flagellin hook IN motif FJR48_RS00800 PF00669 Bacterial flagellin N-terminal helical region FJR48_RS00800 PF07196 Flagellin hook IN motif FJR48_RS00800 PF00700 Bacterial flagellin C-terminal helical region FJR48_RS00800 PF00700 Bacterial flagellin C-terminal helical region FJR48_RS00805 PF01973 Protein of unknown function DUF115 FJR48_RS00810 PF02348 Cytidylyltransferase FJR48_RS00815 PF02350 UDP-N-acetylglucosamine 2-epimerase FJR48_RS00820 PF03102 NeuB family FJR48_RS00820 PF08666 SAF domain FJR48_RS00825 PF13580 SIS domain FJR48_RS00860 PF16861 Carbamoyltransferase C-terminus FJR48_RS00860 PF02543 Carbamoyltransferase N-terminus FJR48_RS00870 PF04055 Radical SAM superfamily FJR48_RS00870 PF02310 B12 binding domain FJR48_RS00880 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FJR48_RS00890 PF01370 NAD dependent epimerase/dehydratase family FJR48_RS00895 PF00456 Transketolase, thiamine diphosphate binding domain FJR48_RS00900 PF02780 Transketolase, C-terminal domain FJR48_RS00900 PF02779 Transketolase, pyrimidine binding domain FJR48_RS00900 PF13292 1-deoxy-D-xylulose-5-phosphate synthase FJR48_RS00910 PF00294 pfkB family carbohydrate kinase FJR48_RS00910 PF01467 Cytidylyltransferase-like FJR48_RS00915 PF00483 Nucleotidyl transferase FJR48_RS00920 PF07195 Flagellar hook-associated protein 2 C-terminus FJR48_RS00920 PF02465 Flagellar hook-associated protein 2 N-terminus FJR48_RS00925 PF02561 Flagellar protein FliS FJR48_RS00935 PF00106 short chain dehydrogenase FJR48_RS00960 PF08334 Type II secretion system (T2SS), protein G FJR48_RS00960 PF07963 Prokaryotic N-terminal methylation motif FJR48_RS00970 PF00482 Type II secretion system (T2SS), protein F FJR48_RS01000 PF00263 Bacterial type II and III secretion system protein FJR48_RS01000 PF03958 Bacterial type II/III secretion system short domain FJR48_RS01005 PF00437 Type II/IV secretion system protein FJR48_RS01020 PF10518 TAT (twin-arginine translocation) pathway signal sequence FJR48_RS01020 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal FJR48_RS01020 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FJR48_RS01025 PF00374 Nickel-dependent hydrogenase FJR48_RS01035 PF01632 Ribosomal protein L35 FJR48_RS01040 PF00453 Ribosomal protein L20 FJR48_RS01045 PF00072 Response regulator receiver domain FJR48_RS01055 PF02743 Cache domain FJR48_RS01055 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FJR48_RS01055 PF00672 HAMP domain FJR48_RS01060 PF16193 AAA C-terminal domain FJR48_RS01060 PF01661 Macro domain FJR48_RS01060 PF12002 MgsA AAA+ ATPase C terminal FJR48_RS01060 PF05496 Holliday junction DNA helicase RuvB P-loop domain FJR48_RS01065 PF01479 S4 domain FJR48_RS01065 PF00849 RNA pseudouridylate synthase FJR48_RS01070 PF00571 CBS domain FJR48_RS01070 PF01380 SIS domain FJR48_RS01080 PF01256 Carbohydrate kinase FJR48_RS01080 PF03853 YjeF-related protein N-terminus FJR48_RS01085 PF05690 Thiazole biosynthesis protein ThiG FJR48_RS01090 PF08448 PAS fold FJR48_RS01090 PF00990 Diguanylate cyclase, GGDEF domain FJR48_RS01100 PF00209 Sodium:neurotransmitter symporter family FJR48_RS01155 PF02661 Fic/DOC family FJR48_RS01155 PF17841 BID domain of Bartonella effector protein (Bep) FJR48_RS01175 PF12795 Mechanosensitive ion channel porin domain FJR48_RS01175 PF00924 Mechanosensitive ion channel FJR48_RS01175 PF12794 Mechanosensitive ion channel inner membrane domain 1 FJR48_RS01195 PF08443 RimK-like ATP-grasp domain FJR48_RS01195 PF18030 RimK PreATP-grasp domain FJR48_RS01210 PF06865 Pyrimidine/purine nucleoside phosphorylase FJR48_RS01215 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FJR48_RS01215 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FJR48_RS01215 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FJR48_RS01215 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FJR48_RS01220 PF02690 Na+/Pi-cotransporter FJR48_RS01230 PF00390 Malic enzyme, N-terminal domain FJR48_RS01230 PF03949 Malic enzyme, NAD binding domain FJR48_RS01235 PF02621 Menaquinone biosynthesis FJR48_RS01245 PF02391 MoaE protein FJR48_RS01250 PF00994 Probable molybdopterin binding domain FJR48_RS01250 PF03454 MoeA C-terminal region (domain IV) FJR48_RS01250 PF03453 MoeA N-terminal region (domain I and II) FJR48_RS01275 PF01351 Ribonuclease HII FJR48_RS01280 PF00196 Bacterial regulatory proteins, luxR family FJR48_RS01280 PF00072 Response regulator receiver domain FJR48_RS01285 PF00072 Response regulator receiver domain FJR48_RS01285 PF00486 Transcriptional regulatory protein, C terminal FJR48_RS01290 PF03976 Polyphosphate kinase 2 (PPK2) FJR48_RS01300 PF00338 Ribosomal protein S10p/S20e FJR48_RS01305 PF00297 Ribosomal protein L3 FJR48_RS01310 PF00573 Ribosomal protein L4/L1 family FJR48_RS01315 PF00276 Ribosomal protein L23 FJR48_RS01320 PF03947 Ribosomal Proteins L2, C-terminal domain FJR48_RS01320 PF00181 Ribosomal Proteins L2, RNA binding domain FJR48_RS01325 PF00203 Ribosomal protein S19 FJR48_RS01330 PF00237 Ribosomal protein L22p/L17e FJR48_RS01335 PF00189 Ribosomal protein S3, C-terminal domain FJR48_RS01335 PF07650 KH domain FJR48_RS01340 PF00252 Ribosomal protein L16p/L10e FJR48_RS01345 PF00831 Ribosomal L29 protein FJR48_RS01350 PF00366 Ribosomal protein S17 FJR48_RS01355 PF00238 Ribosomal protein L14p/L23e FJR48_RS01360 PF00467 KOW motif FJR48_RS01360 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 FJR48_RS01365 PF00281 Ribosomal protein L5 FJR48_RS01365 PF00673 ribosomal L5P family C-terminus FJR48_RS01370 PF00253 Ribosomal protein S14p/S29e FJR48_RS01375 PF00410 Ribosomal protein S8 FJR48_RS01380 PF00347 Ribosomal protein L6 FJR48_RS01385 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast FJR48_RS01390 PF03719 Ribosomal protein S5, C-terminal domain FJR48_RS01390 PF00333 Ribosomal protein S5, N-terminal domain FJR48_RS01395 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A FJR48_RS01400 PF00344 SecY translocase FJR48_RS01405 PF00557 Metallopeptidase family M24 FJR48_RS01410 PF01176 Translation initiation factor 1A / IF-1 FJR48_RS01435 PF00444 Ribosomal protein L36 FJR48_RS01440 PF00416 Ribosomal protein S13/S18 FJR48_RS01445 PF00411 Ribosomal protein S11 FJR48_RS01450 PF00163 Ribosomal protein S4/S9 N-terminal domain FJR48_RS01450 PF01479 S4 domain FJR48_RS01455 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain FJR48_RS01455 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain FJR48_RS01455 PF01000 RNA polymerase Rpb3/RpoA insert domain FJR48_RS01460 PF01196 Ribosomal protein L17 FJR48_RS01470 PF01106 NifU-like domain FJR48_RS01480 PF08245 Mur ligase middle domain FJR48_RS01480 PF02875 Mur ligase family, glutamate ligase domain FJR48_RS01500 PF02261 Aspartate decarboxylase FJR48_RS01505 PF02575 YbaB/EbfC DNA-binding family FJR48_RS01515 PF00348 Polyprenyl synthetase FJR48_RS01520 PF02779 Transketolase, pyrimidine binding domain FJR48_RS01520 PF00456 Transketolase, thiamine diphosphate binding domain FJR48_RS01520 PF02780 Transketolase, C-terminal domain FJR48_RS01545 PF01098 Cell cycle protein FJR48_RS01550 PF04101 Glycosyltransferase family 28 C-terminal domain FJR48_RS01550 PF03033 Glycosyltransferase family 28 N-terminal domain FJR48_RS01555 PF09335 SNARE associated Golgi protein FJR48_RS01565 PF00578 AhpC/TSA family FJR48_RS01575 PF00318 Ribosomal protein S2 FJR48_RS01580 PF00889 Elongation factor TS FJR48_RS01585 PF00005 ABC transporter FJR48_RS01590 PF01311 Bacterial export proteins, family 1 FJR48_RS01600 PF00625 Guanylate kinase FJR48_RS01605 PF02416 mttA/Hcf106 family FJR48_RS01610 PF00750 tRNA synthetases class I (R) FJR48_RS01610 PF05746 DALR anticodon binding domain FJR48_RS01610 PF03485 Arginyl tRNA synthetase N terminal domain FJR48_RS01635 PF17805 AsnC-like ligand binding domain FJR48_RS01640 PF10414 Sirohaem synthase dimerisation region FJR48_RS01640 PF14824 Sirohaem biosynthesis protein central FJR48_RS01640 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FJR48_RS01660 PF01883 Iron-sulfur cluster assembly protein FJR48_RS01670 PF02885 Glycosyl transferase family, helical bundle domain FJR48_RS01670 PF00591 Glycosyl transferase family, a/b domain FJR48_RS01675 PF00325 Bacterial regulatory proteins, crp family FJR48_RS01675 PF00027 Cyclic nucleotide-binding domain FJR48_RS01695 PF00034 Cytochrome c FJR48_RS01700 PF00115 Cytochrome C and Quinol oxidase polypeptide I FJR48_RS01715 PF04055 Radical SAM superfamily FJR48_RS01715 PF13186 Iron-sulfur cluster-binding domain FJR48_RS01725 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FJR48_RS01730 PF08447 PAS fold FJR48_RS01730 PF08448 PAS fold FJR48_RS01730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJR48_RS01735 PF00486 Transcriptional regulatory protein, C terminal FJR48_RS01735 PF00072 Response regulator receiver domain FJR48_RS01760 PF03553 Na+/H+ antiporter family FJR48_RS01765 PF00164 Ribosomal protein S12/S23 FJR48_RS01770 PF00177 Ribosomal protein S7p/S5e FJR48_RS01775 PF03764 Elongation factor G, domain IV FJR48_RS01775 PF00009 Elongation factor Tu GTP binding domain FJR48_RS01775 PF03144 Elongation factor Tu domain 2 FJR48_RS01775 PF00679 Elongation factor G C-terminus FJR48_RS01775 PF14492 Elongation Factor G, domain II FJR48_RS01790 PF04376 Arginine-tRNA-protein transferase, N terminus FJR48_RS01790 PF04377 Arginine-tRNA-protein transferase, C terminus FJR48_RS01795 PF11871 Domain of unknown function (DUF3391) FJR48_RS01795 PF01966 HD domain FJR48_RS01805 PF00472 RF-1 domain FJR48_RS01805 PF03462 PCRF domain FJR48_RS01810 PF02569 Pantoate-beta-alanine ligase FJR48_RS01815 PF00905 Penicillin binding protein transpeptidase domain FJR48_RS01815 PF03717 Penicillin-binding Protein dimerisation domain FJR48_RS01820 PF02049 Flagellar hook-basal body complex protein FliE FJR48_RS01825 PF00460 Flagella basal body rod protein FJR48_RS01825 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FJR48_RS01830 PF00460 Flagella basal body rod protein FJR48_RS01835 PF07963 Prokaryotic N-terminal methylation motif FJR48_RS01840 PF00114 Pilin (bacterial filament) FJR48_RS01840 PF07963 Prokaryotic N-terminal methylation motif FJR48_RS01845 PF17764 3′ DNA-binding domain (3′BD) FJR48_RS01845 PF18319 PriA DNA helicase Cys-rich region (CRR) domain FJR48_RS01845 PF18074 Primosomal protein N C-terminal domain FJR48_RS01845 PF00270 DEAD/DEAH box helicase FJR48_RS01845 PF00271 Helicase conserved C-terminal domain FJR48_RS01855 PF00290 Tryptophan synthase alpha chain FJR48_RS01865 PF02548 Ketopantoate hydroxymethyltransferase FJR48_RS01875 PF05491 RuvB C-terminal winged helix domain FJR48_RS01875 PF05496 Holliday junction DNA helicase RuvB P-loop domain FJR48_RS01875 PF17864 RuvB AAA lid domain FJR48_RS01880 PF01594 AI-2E family transporter FJR48_RS01895 PF00117 Glutamine amidotransferase class-I FJR48_RS01900 PF00977 Histidine biosynthesis protein FJR48_RS01905 PF00072 Response regulator receiver domain FJR48_RS01915 PF01434 Peptidase family M41 FJR48_RS01915 PF17862 AAA+ lid domain FJR48_RS01915 PF00004 ATPase family associated with various cellular activities (AAA) FJR48_RS01920 PF02666 Phosphatidylserine decarboxylase FJR48_RS01930 PF08534 Redoxin FJR48_RS01940 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FJR48_RS01940 PF02403 Seryl-tRNA synthetase N-terminal domain FJR48_RS01965 PF00512 His Kinase A (phospho-acceptor) domain FJR48_RS01965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJR48_RS01965 PF00072 Response regulator receiver domain FJR48_RS01965 PF09308 LuxQ, periplasmic FJR48_RS01970 PF00072 Response regulator receiver domain FJR48_RS01970 PF00512 His Kinase A (phospho-acceptor) domain FJR48_RS01970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJR48_RS01970 PF09308 LuxQ, periplasmic FJR48_RS01975 PF01084 Ribosomal protein S18 FJR48_RS01980 PF00436 Single-strand binding protein family FJR48_RS01985 PF01250 Ribosomal protein S6 FJR48_RS01990 PF04748 Divergent polysaccharide deacetylase FJR48_RS02000 PF02547 Queuosine biosynthesis protein FJR48_RS02005 PF00902 Sec-independent protein translocase protein (TatC) FJR48_RS02015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FJR48_RS02020 PF06969 HemN C-terminal domain FJR48_RS02020 PF04055 Radical SAM superfamily FJR48_RS02025 PF00563 EAL domain FJR48_RS02025 PF08495 FIST N domain FJR48_RS02025 PF10442 FIST C domain FJR48_RS02025 PF00990 Diguanylate cyclase, GGDEF domain FJR48_RS02030 PF00293 NUDIX domain FJR48_RS02035 PF01842 ACT domain FJR48_RS02035 PF00696 Amino acid kinase family FJR48_RS02035 PF13840 ACT domain FJR48_RS02050 PF00809 Pterin binding enzyme FJR48_RS02055 PF03150 Di-haem cytochrome c peroxidase FJR48_RS02055 PF00034 Cytochrome c FJR48_RS02060 PF00012 Hsp70 protein FJR48_RS02065 PF01025 GrpE FJR48_RS02070 PF00990 Diguanylate cyclase, GGDEF domain FJR48_RS02070 PF00563 EAL domain FJR48_RS02070 PF08495 FIST N domain FJR48_RS02070 PF10442 FIST C domain FJR48_RS02080 PF00563 EAL domain FJR48_RS02080 PF00990 Diguanylate cyclase, GGDEF domain FJR48_RS02080 PF08495 FIST N domain FJR48_RS02080 PF10442 FIST C domain FJR48_RS02095 PF06421 GTP-binding protein LepA C-terminus FJR48_RS02095 PF00009 Elongation factor Tu GTP binding domain FJR48_RS02095 PF00679 Elongation factor G C-terminus FJR48_RS02100 PF14572 Phosphoribosyl synthetase-associated domain FJR48_RS02100 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase FJR48_RS02110 PF00468 Ribosomal protein L34 FJR48_RS02115 PF00825 Ribonuclease P FJR48_RS02120 PF01809 Putative membrane protein insertion efficiency factor FJR48_RS02125 PF02096 60Kd inner membrane protein FJR48_RS02125 PF14849 YidC periplasmic domain FJR48_RS02135 PF01926 50S ribosome-binding GTPase FJR48_RS02135 PF10396 GTP-binding protein TrmE N-terminus FJR48_RS02135 PF12631 MnmE helical domain FJR48_RS02140 PF03652 Holliday junction resolvase FJR48_RS02145 PF03737 Aldolase/RraA FJR48_RS02160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJR48_RS02165 PF00486 Transcriptional regulatory protein, C terminal FJR48_RS02165 PF00072 Response regulator receiver domain FJR48_RS02175 PF02310 B12 binding domain FJR48_RS02180 PF06368 Methylaspartate mutase E chain (MutE) FJR48_RS02190 PF00501 AMP-binding enzyme FJR48_RS02190 PF13193 AMP-binding enzyme C-terminal domain FJR48_RS02210 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain FJR48_RS02210 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain FJR48_RS02220 PF00773 RNB domain FJR48_RS02235 PF01272 Transcription elongation factor, GreA/GreB, C-term FJR48_RS02235 PF03449 Transcription elongation factor, N-terminal FJR48_RS02240 PF02769 AIR synthase related protein, C-terminal domain FJR48_RS02240 PF00586 AIR synthase related protein, N-terminal domain FJR48_RS02240 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain FJR48_RS02260 PF00990 Diguanylate cyclase, GGDEF domain FJR48_RS02260 PF10442 FIST C domain FJR48_RS02260 PF08495 FIST N domain FJR48_RS02260 PF00563 EAL domain FJR48_RS02265 PF00365 Phosphofructokinase FJR48_RS02270 PF02142 MGS-like domain FJR48_RS02270 PF01808 AICARFT/IMPCHase bienzyme FJR48_RS02280 PF07715 TonB-dependent Receptor Plug Domain FJR48_RS02280 PF00593 TonB dependent receptor FJR48_RS02285 PF00684 DnaJ central domain FJR48_RS02285 PF01556 DnaJ C terminal domain FJR48_RS02285 PF00226 DnaJ domain FJR48_RS02295 PF09313 Domain of unknown function (DUF1971) FJR48_RS02295 PF03848 Tellurite resistance protein TehB FJR48_RS02300 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FJR48_RS02305 PF03707 Bacterial signalling protein N terminal repeat FJR48_RS02305 PF00563 EAL domain FJR48_RS02305 PF00990 Diguanylate cyclase, GGDEF domain FJR48_RS02315 PF07715 TonB-dependent Receptor Plug Domain FJR48_RS02315 PF00593 TonB dependent receptor FJR48_RS02330 PF00929 Exonuclease FJR48_RS02345 PF00990 Diguanylate cyclase, GGDEF domain FJR48_RS02345 PF00072 Response regulator receiver domain FJR48_RS02350 PF02119 Flagellar P-ring protein FJR48_RS02370 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FJR48_RS02370 PF00460 Flagella basal body rod protein FJR48_RS02375 PF12911 N-terminal TM domain of oligopeptide transport permease C FJR48_RS02375 PF00528 Binding-protein-dependent transport system inner membrane component FJR48_RS02380 PF01594 AI-2E family transporter FJR48_RS02385 PF00117 Glutamine amidotransferase class-I FJR48_RS02395 PF00549 CoA-ligase FJR48_RS02395 PF08442 ATP-grasp domain FJR48_RS02400 PF02629 CoA binding domain FJR48_RS02400 PF00549 CoA-ligase FJR48_RS02430 PF13580 SIS domain FJR48_RS02435 PF08645 Polynucleotide kinase 3 phosphatase FJR48_RS02440 PF17763 Glutaminase/Asparaginase C-terminal domain FJR48_RS02440 PF00710 Asparaginase, N-terminal FJR48_RS02445 PF00403 Heavy-metal-associated domain FJR48_RS02475 PF00483 Nucleotidyl transferase FJR48_RS02480 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase FJR48_RS02485 PF04321 RmlD substrate binding domain FJR48_RS02490 PF16363 GDP-mannose 4,6 dehydratase FJR48_RS02495 PF03062 MBOAT, membrane-bound O-acyltransferase family FJR48_RS02530 PF05523 WxcM-like, C-terminal FJR48_RS02535 PF00132 Bacterial transferase hexapeptide (six repeats) FJR48_RS02540 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FJR48_RS02545 PF00535 Glycosyl transferase family 2 FJR48_RS02550 PF00535 Glycosyl transferase family 2 FJR48_RS02560 PF00535 Glycosyl transferase family 2 FJR48_RS02580 PF01370 NAD dependent epimerase/dehydratase family FJR48_RS02585 PF00294 pfkB family carbohydrate kinase FJR48_RS02585 PF01467 Cytidylyltransferase-like FJR48_RS02590 PF01075 Glycosyltransferase family 9 (heptosyltransferase) FJR48_RS02600 PF00005 ABC transporter FJR48_RS02600 PF00664 ABC transporter transmembrane region FJR48_RS02615 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FJR48_RS02620 PF00873 AcrB/AcrD/AcrF family FJR48_RS02625 PF00886 Ribosomal protein S16 FJR48_RS02635 PF01782 RimM N-terminal domain FJR48_RS02640 PF01746 tRNA (Guanine-1)-methyltransferase FJR48_RS02645 PF01245 Ribosomal protein L19 FJR48_RS02670 PF03588 Leucyl/phenylalanyl-tRNA protein transferase FJR48_RS02675 PF10431 C-terminal, D2-small domain, of ClpB protein FJR48_RS02675 PF00004 ATPase family associated with various cellular activities (AAA) FJR48_RS02675 PF02861 Clp amino terminal domain, pathogenicity island component FJR48_RS02675 PF17871 AAA lid domain FJR48_RS02675 PF07724 AAA domain (Cdc48 subfamily) FJR48_RS02680 PF02617 ATP-dependent Clp protease adaptor protein ClpS FJR48_RS02685 PF01053 Cys/Met metabolism PLP-dependent enzyme FJR48_RS02695 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FJR48_RS02695 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FJR48_RS02700 PF00425 chorismate binding enzyme FJR48_RS02705 PF00512 His Kinase A (phospho-acceptor) domain FJR48_RS02705 PF00989 PAS fold FJR48_RS02705 PF08447 PAS fold FJR48_RS02705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJR48_RS02710 PF00923 Transaldolase/Fructose-6-phosphate aldolase FJR48_RS02715 PF00437 Type II/IV secretion system protein FJR48_RS02720 PF14693 Ribosomal protein TL5, C-terminal domain FJR48_RS02720 PF01386 Ribosomal L25p family FJR48_RS02725 PF01195 Peptidyl-tRNA hydrolase FJR48_RS02735 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FJR48_RS02735 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FJR48_RS02740 PF13344 Haloacid dehalogenase-like hydrolase FJR48_RS02745 PF01842 ACT domain FJR48_RS02745 PF01817 Chorismate mutase type II FJR48_RS02745 PF00800 Prephenate dehydratase FJR48_RS02750 PF00155 Aminotransferase class I and II FJR48_RS02755 PF08345 Flagellar M-ring protein C-terminal FJR48_RS02755 PF01514 Secretory protein of YscJ/FliF family FJR48_RS02760 PF14842 FliG N-terminal domain FJR48_RS02760 PF01706 FliG C-terminal domain FJR48_RS02760 PF14841 FliG middle domain FJR48_RS02770 PF02780 Transketolase, C-terminal domain FJR48_RS02770 PF13292 1-deoxy-D-xylulose-5-phosphate synthase FJR48_RS02770 PF02779 Transketolase, pyrimidine binding domain FJR48_RS02775 PF02578 Multi-copper polyphenol oxidoreductase laccase FJR48_RS02780 PF03781 Sulfatase-modifying factor enzyme 1 FJR48_RS02780 PF12867 DinB superfamily FJR48_RS02785 PF00155 Aminotransferase class I and II FJR48_RS02805 PF00005 ABC transporter FJR48_RS02805 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FJR48_RS02815 PF02537 CrcB-like protein, Camphor Resistance (CrcB) FJR48_RS02820 PF01553 Acyltransferase FJR48_RS02835 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase FJR48_RS02840 PF01259 SAICAR synthetase FJR48_RS02845 PF03572 Peptidase family S41 FJR48_RS02845 PF13180 PDZ domain FJR48_RS02860 PF12838 4Fe-4S dicluster domain FJR48_RS02860 PF12800 4Fe-4S binding domain FJR48_RS02870 PF00034 Cytochrome c FJR48_RS02875 PF13237 4Fe-4S dicluster domain FJR48_RS02875 PF12801 4Fe-4S binding domain FJR48_RS02880 PF00005 ABC transporter FJR48_RS02890 PF12679 ABC-2 family transporter protein FJR48_RS02900 PF08447 PAS fold FJR48_RS02900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FJR48_RS02920 PF00027 Cyclic nucleotide-binding domain FJR48_RS02920 PF13545 Crp-like helix-turn-helix domain FJR48_RS02930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJR48_RS02930 PF08447 PAS fold FJR48_RS02930 PF08448 PAS fold FJR48_RS02935 PF00486 Transcriptional regulatory protein, C terminal FJR48_RS02935 PF00072 Response regulator receiver domain FJR48_RS02940 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FJR48_RS02940 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FJR48_RS02945 PF01451 Low molecular weight phosphotyrosine protein phosphatase FJR48_RS02950 PF00291 Pyridoxal-phosphate dependent enzyme FJR48_RS02965 PF03466 LysR substrate binding domain FJR48_RS02965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FJR48_RS02970 PF00580 UvrD/REP helicase N-terminal domain FJR48_RS02970 PF13361 UvrD-like helicase C-terminal domain FJR48_RS02975 PF01509 TruB family pseudouridylate synthase (N terminal domain) FJR48_RS02980 PF02599 Global regulator protein family FJR48_RS02985 PF00288 GHMP kinases N terminal domain FJR48_RS02990 PF01668 SmpB protein FJR48_RS03005 PF01784 NIF3 (NGG1p interacting factor 3) FJR48_RS03015 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) FJR48_RS03020 PF00849 RNA pseudouridylate synthase FJR48_RS03025 PF01541 GIY-YIG catalytic domain FJR48_RS03030 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 FJR48_RS03035 PF01863 Protein of unknown function DUF45 FJR48_RS03045 PF02978 Signal peptide binding domain FJR48_RS03045 PF02881 SRP54-type protein, helical bundle domain FJR48_RS03045 PF00448 SRP54-type protein, GTPase domain FJR48_RS03050 PF06969 HemN C-terminal domain FJR48_RS03050 PF04055 Radical SAM superfamily FJR48_RS03055 PF02665 Nitrate reductase gamma subunit FJR48_RS03055 PF13183 4Fe-4S dicluster domain FJR48_RS03055 PF02754 Cysteine-rich domain FJR48_RS03060 PF01790 Prolipoprotein diacylglyceryl transferase FJR48_RS03075 PF00270 DEAD/DEAH box helicase FJR48_RS03075 PF00271 Helicase conserved C-terminal domain FJR48_RS03085 PF00849 RNA pseudouridylate synthase FJR48_RS03095 PF00990 Diguanylate cyclase, GGDEF domain FJR48_RS03095 PF00563 EAL domain FJR48_RS03095 PF10442 FIST C domain FJR48_RS03095 PF08495 FIST N domain FJR48_RS03100 PF01875 Memo-like protein FJR48_RS03105 PF00072 Response regulator receiver domain FJR48_RS03105 PF09308 LuxQ, periplasmic FJR48_RS03105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJR48_RS03105 PF00512 His Kinase A (phospho-acceptor) domain FJR48_RS03125 PF00166 Chaperonin 10 Kd subunit FJR48_RS03130 PF00118 TCP-1/cpn60 chaperonin family FJR48_RS03140 PF11849 Domain of unknown function (DUF3369) FJR48_RS03150 PF01734 Patatin-like phospholipase FJR48_RS03155 PF02472 Biopolymer transport protein ExbD/TolR FJR48_RS03160 PF01618 MotA/TolQ/ExbB proton channel family FJR48_RS03165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJR48_RS03170 PF00486 Transcriptional regulatory protein, C terminal FJR48_RS03170 PF00072 Response regulator receiver domain FJR48_RS03180 PF00990 Diguanylate cyclase, GGDEF domain FJR48_RS03185 PF11940 Domain of unknown function (DUF3458) Ig-like fold FJR48_RS03185 PF17432 Domain of unknown function (DUF3458_C) ARM repeats FJR48_RS03185 PF01433 Peptidase family M1 domain FJR48_RS03195 PF01327 Polypeptide deformylase FJR48_RS03200 PF00072 Response regulator receiver domain FJR48_RS03200 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FJR48_RS03200 PF00512 His Kinase A (phospho-acceptor) domain FJR48_RS03200 PF01627 Hpt domain FJR48_RS03200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJR48_RS03200 PF00672 HAMP domain FJR48_RS03210 PF00909 Ammonium Transporter Family FJR48_RS03215 PF00543 Nitrogen regulatory protein P-II FJR48_RS03220 PF00120 Glutamine synthetase, catalytic domain FJR48_RS03220 PF03951 Glutamine synthetase, beta-Grasp domain FJR48_RS03225 PF00148 Nitrogenase component 1 type Oxidoreductase FJR48_RS03235 PF02579 Dinitrogenase iron-molybdenum cofactor FJR48_RS03240 PF03270 Protein of unknown function, DUF269 FJR48_RS03245 PF00258 Flavodoxin FJR48_RS03250 PF00543 Nitrogen regulatory protein P-II FJR48_RS03255 PF03206 Nitrogen fixation protein NifW FJR48_RS03260 PF04319 NifZ domain FJR48_RS03265 PF00111 2Fe-2S iron-sulfur cluster binding domain FJR48_RS03270 PF00309 Sigma-54 factor, Activator interacting domain (AID) FJR48_RS03270 PF04552 Sigma-54, DNA binding domain FJR48_RS03270 PF04963 Sigma-54 factor, core binding domain FJR48_RS03280 PF00171 Aldehyde dehydrogenase family FJR48_RS03285 PF00474 Sodium:solute symporter family FJR48_RS03290 PF00696 Amino acid kinase family FJR48_RS03305 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FJR48_RS03305 PF00289 Biotin carboxylase, N-terminal domain FJR48_RS03305 PF02785 Biotin carboxylase C-terminal domain FJR48_RS03310 PF00148 Nitrogenase component 1 type Oxidoreductase FJR48_RS03325 PF02579 Dinitrogenase iron-molybdenum cofactor FJR48_RS03335 PF00266 Aminotransferase class-V FJR48_RS03340 PF01592 NifU-like N terminal domain FJR48_RS03340 PF01106 NifU-like domain FJR48_RS03340 PF04324 BFD-like [2Fe-2S] binding domain FJR48_RS03350 PF00141 Peroxidase FJR48_RS03355 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family FJR48_RS03365 PF00148 Nitrogenase component 1 type Oxidoreductase FJR48_RS03370 PF00148 Nitrogenase component 1 type Oxidoreductase FJR48_RS03370 PF11844 Domain of unknown function (DUF3364) FJR48_RS03415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FJR48_RS03415 PF03459 TOBE domain FJR48_RS03430 PF00248 Aldo/keto reductase family FJR48_RS03435 PF02910 Fumarate reductase flavoprotein C-term FJR48_RS03435 PF00890 FAD binding domain FJR48_RS03440 PF06988 NifT/FixU protein FJR48_RS03445 PF02954 Bacterial regulatory protein, Fis family FJR48_RS03445 PF00158 Sigma-54 interaction domain FJR48_RS03445 PF01590 GAF domain FJR48_RS03455 PF00561 alpha/beta hydrolase fold FJR48_RS03465 PF06689 ClpX C4-type zinc finger FJR48_RS03465 PF10431 C-terminal, D2-small domain, of ClpB protein FJR48_RS03465 PF07724 AAA domain (Cdc48 subfamily) FJR48_RS03475 PF00005 ABC transporter FJR48_RS03500 PF00682 HMGL-like FJR48_RS03505 PF02579 Dinitrogenase iron-molybdenum cofactor FJR48_RS03505 PF04055 Radical SAM superfamily FJR48_RS03520 PF12838 4Fe-4S dicluster domain FJR48_RS03535 PF02915 Rubrerythrin FJR48_RS03540 PF00990 Diguanylate cyclase, GGDEF domain FJR48_RS03540 PF10442 FIST C domain FJR48_RS03540 PF08495 FIST N domain FJR48_RS03540 PF00563 EAL domain FJR48_RS03550 PF00916 Sulfate permease family FJR48_RS03550 PF01740 STAS domain FJR48_RS03555 PF09308 LuxQ, periplasmic FJR48_RS03555 PF00072 Response regulator receiver domain FJR48_RS03555 PF00512 His Kinase A (phospho-acceptor) domain FJR48_RS03555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJR48_RS03570 PF04055 Radical SAM superfamily FJR48_RS03575 PF01208 Uroporphyrinogen decarboxylase (URO-D) FJR48_RS03585 PF02774 Semialdehyde dehydrogenase, dimerisation domain FJR48_RS03585 PF01118 Semialdehyde dehydrogenase, NAD binding domain FJR48_RS03590 PF00158 Sigma-54 interaction domain FJR48_RS03590 PF00072 Response regulator receiver domain FJR48_RS03605 PF03989 DNA gyrase C-terminal domain, beta-propeller FJR48_RS03605 PF00521 DNA gyrase/topoisomerase IV, subunit A FJR48_RS03610 PF00909 Ammonium Transporter Family FJR48_RS03615 PF00543 Nitrogen regulatory protein P-II FJR48_RS03620 PF00909 Ammonium Transporter Family FJR48_RS03625 PF01964 Radical SAM ThiC family FJR48_RS03630 PF01883 Iron-sulfur cluster assembly protein FJR48_RS03630 PF10609 NUBPL iron-transfer P-loop NTPase FJR48_RS03635 PF00072 Response regulator receiver domain FJR48_RS03635 PF00990 Diguanylate cyclase, GGDEF domain FJR48_RS03640 PF01380 SIS domain FJR48_RS03645 PF08335 GlnD PII-uridylyltransferase FJR48_RS03645 PF01909 Nucleotidyltransferase domain FJR48_RS03645 PF01966 HD domain FJR48_RS03645 PF01842 ACT domain FJR48_RS03655 PF01636 Phosphotransferase enzyme family FJR48_RS03660 PF01008 Initiation factor 2 subunit family FJR48_RS03665 PF00596 Class II Aldolase and Adducin N-terminal domain FJR48_RS03670 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FJR48_RS03670 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FJR48_RS03675 PF04055 Radical SAM superfamily FJR48_RS03685 PF00535 Glycosyl transferase family 2 FJR48_RS03690 PF02516 Oligosaccharyl transferase STT3 subunit FJR48_RS03690 PF18527 STT3/PglB C-terminal beta-barrel domain FJR48_RS03695 PF01068 ATP dependent DNA ligase domain FJR48_RS03695 PF14743 DNA ligase OB-like domain FJR48_RS03700 PF00342 Phosphoglucose isomerase FJR48_RS03705 PF00483 Nucleotidyl transferase FJR48_RS03710 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FJR48_RS03710 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FJR48_RS03710 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FJR48_RS03715 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FJR48_RS03715 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FJR48_RS03720 PF00132 Bacterial transferase hexapeptide (six repeats) FJR48_RS03725 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FJR48_RS03730 PF01507 Phosphoadenosine phosphosulfate reductase family FJR48_RS03735 PF00009 Elongation factor Tu GTP binding domain FJR48_RS03750 PF00459 Inositol monophosphatase family FJR48_RS03760 PF02543 Carbamoyltransferase N-terminus FJR48_RS03760 PF16861 Carbamoyltransferase C-terminus FJR48_RS03810 PF00117 Glutamine amidotransferase class-I FJR48_RS03810 PF00958 GMP synthase C terminal domain FJR48_RS03815 PF00117 Glutamine amidotransferase class-I FJR48_RS03820 PF00977 Histidine biosynthesis protein FJR48_RS03825 PF00733 Asparagine synthase FJR48_RS03825 PF13537 Glutamine amidotransferase domain FJR48_RS03835 PF01757 Acyltransferase family FJR48_RS03840 PF08485 Polysaccharide biosynthesis protein C-terminal FJR48_RS03840 PF02719 Polysaccharide biosynthesis protein FJR48_RS03845 PF01370 NAD dependent epimerase/dehydratase family FJR48_RS03850 PF02350 UDP-N-acetylglucosamine 2-epimerase FJR48_RS03855 PF13579 Glycosyl transferase 4-like domain FJR48_RS03855 PF00534 Glycosyl transferases group 1 FJR48_RS03865 PF02397 Bacterial sugar transferase FJR48_RS03870 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FJR48_RS03875 PF02719 Polysaccharide biosynthesis protein FJR48_RS03885 PF03738 Glutathionylspermidine synthase preATP-grasp FJR48_RS03905 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FJR48_RS03905 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain FJR48_RS03905 PF02142 MGS-like domain FJR48_RS03920 PF06689 ClpX C4-type zinc finger FJR48_RS03920 PF10431 C-terminal, D2-small domain, of ClpB protein FJR48_RS03920 PF07724 AAA domain (Cdc48 subfamily) FJR48_RS03925 PF00132 Bacterial transferase hexapeptide (six repeats) FJR48_RS03925 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 FJR48_RS03930 PF07977 FabA-like domain FJR48_RS03935 PF02677 Epoxyqueuosine reductase QueH FJR48_RS03940 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FJR48_RS03945 PF00672 HAMP domain FJR48_RS03945 PF00512 His Kinase A (phospho-acceptor) domain FJR48_RS03945 PF13426 PAS domain FJR48_RS03945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJR48_RS03950 PF00072 Response regulator receiver domain FJR48_RS03950 PF00486 Transcriptional regulatory protein, C terminal FJR48_RS03955 PF00672 HAMP domain FJR48_RS03955 PF17200 Single Cache domain 2 FJR48_RS03955 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FJR48_RS03970 PF00474 Sodium:solute symporter family FJR48_RS03980 PF00929 Exonuclease FJR48_RS03980 PF02811 PHP domain FJR48_RS03980 PF14579 Helix-hairpin-helix motif FJR48_RS03980 PF07733 Bacterial DNA polymerase III alpha NTPase domain FJR48_RS03980 PF11490 DNA polymerase III polC-type N-terminus II FJR48_RS03980 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FJR48_RS03985 PF16177 Acetyl-coenzyme A synthetase N-terminus FJR48_RS03985 PF00501 AMP-binding enzyme FJR48_RS03985 PF13193 AMP-binding enzyme C-terminal domain FJR48_RS03990 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family FJR48_RS04035 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath FJR48_RS04045 PF05947 Type VI secretion system, TssF FJR48_RS04055 PF17871 AAA lid domain FJR48_RS04055 PF10431 C-terminal, D2-small domain, of ClpB protein FJR48_RS04055 PF07724 AAA domain (Cdc48 subfamily) FJR48_RS04055 PF00004 ATPase family associated with various cellular activities (AAA) FJR48_RS04070 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE FJR48_RS04090 PF03793 PASTA domain FJR48_RS04090 PF00069 Protein kinase domain FJR48_RS04095 PF05638 Type VI secretion system effector, Hcp FJR48_RS04100 PF04717 Type VI secretion system, phage-baseplate injector FJR48_RS04140 PF00196 Bacterial regulatory proteins, luxR family FJR48_RS04140 PF00072 Response regulator receiver domain FJR48_RS04150 PF00664 ABC transporter transmembrane region FJR48_RS04150 PF03412 Peptidase C39 family FJR48_RS04150 PF00005 ABC transporter FJR48_RS04160 PF13488 Glycine zipper FJR48_RS04160 PF00691 OmpA family FJR48_RS04165 PF00488 MutS domain V FJR48_RS04165 PF05190 MutS family domain IV FJR48_RS04165 PF01624 MutS domain I FJR48_RS04165 PF05188 MutS domain II FJR48_RS04165 PF05192 MutS domain III FJR48_RS04170 PF08448 PAS fold FJR48_RS04170 PF08447 PAS fold FJR48_RS04170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJR48_RS04175 PF07687 Peptidase dimerisation domain FJR48_RS04175 PF01546 Peptidase family M20/M25/M40 FJR48_RS04185 PF01042 Endoribonuclease L-PSP FJR48_RS04195 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FJR48_RS04195 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal FJR48_RS04205 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal FJR48_RS04205 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FJR48_RS04205 PF10518 TAT (twin-arginine translocation) pathway signal sequence FJR48_RS04210 PF00374 Nickel-dependent hydrogenase FJR48_RS04230 PF17788 HypF Kae1-like domain FJR48_RS04230 PF01300 Telomere recombination FJR48_RS04230 PF07503 HypF finger FJR48_RS04230 PF00708 Acylphosphatase FJR48_RS04245 PF00072 Response regulator receiver domain FJR48_RS04245 PF00990 Diguanylate cyclase, GGDEF domain FJR48_RS04255 PF02492 CobW/HypB/UreG, nucleotide-binding domain FJR48_RS04260 PF01455 HupF/HypC family FJR48_RS04265 PF01924 Hydrogenase formation hypA family FJR48_RS04270 PF00300 Histidine phosphatase superfamily (branch 1) FJR48_RS04275 PF00248 Aldo/keto reductase family FJR48_RS04280 PF00582 Universal stress protein family FJR48_RS04285 PF02769 AIR synthase related protein, C-terminal domain FJR48_RS04285 PF00586 AIR synthase related protein, N-terminal domain FJR48_RS04290 PF00551 Formyl transferase FJR48_RS04290 PF02911 Formyl transferase, C-terminal domain FJR48_RS04290 PF00378 Enoyl-CoA hydratase/isomerase FJR48_RS04295 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA FJR48_RS04300 PF00829 Ribosomal prokaryotic L21 protein FJR48_RS04305 PF01016 Ribosomal L27 protein FJR48_RS04310 PF01926 50S ribosome-binding GTPase FJR48_RS04310 PF01018 GTP1/OBG FJR48_RS04315 PF00551 Formyl transferase FJR48_RS04315 PF02911 Formyl transferase, C-terminal domain FJR48_RS04325 PF13614 AAA domain FJR48_RS04330 PF17762 HTH domain found in ParB protein FJR48_RS04330 PF02195 ParB-like nuclease domain FJR48_RS04335 PF00430 ATP synthase B/B' CF(0) FJR48_RS04340 PF00430 ATP synthase B/B' CF(0) FJR48_RS04345 PF00213 ATP synthase delta (OSCP) subunit FJR48_RS04350 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FJR48_RS04350 PF02874 ATP synthase alpha/beta family, beta-barrel domain FJR48_RS04350 PF00306 ATP synthase alpha/beta chain, C terminal domain FJR48_RS04355 PF00231 ATP synthase FJR48_RS04360 PF02874 ATP synthase alpha/beta family, beta-barrel domain FJR48_RS04360 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FJR48_RS04365 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain FJR48_RS04370 PF01618 MotA/TolQ/ExbB proton channel family FJR48_RS04375 PF02472 Biopolymer transport protein ExbD/TolR FJR48_RS04385 PF04052 TolB amino-terminal domain FJR48_RS04390 PF00691 OmpA family FJR48_RS04400 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FJR48_RS04405 PF00158 Sigma-54 interaction domain FJR48_RS04405 PF02954 Bacterial regulatory protein, Fis family FJR48_RS04405 PF00072 Response regulator receiver domain FJR48_RS04410 PF00698 Acyl transferase domain FJR48_RS04415 PF02540 NAD synthase FJR48_RS04415 PF00795 Carbon-nitrogen hydrolase FJR48_RS04420 PF01048 Phosphorylase superfamily FJR48_RS04425 PF01171 PP-loop family FJR48_RS04435 PF01627 Hpt domain FJR48_RS04435 PF00512 His Kinase A (phospho-acceptor) domain FJR48_RS04435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJR48_RS04435 PF18415 Histidine kinase receptor ArcB trans-membrane domain FJR48_RS04435 PF00072 Response regulator receiver domain FJR48_RS04435 PF00989 PAS fold FJR48_RS04445 PF01709 Transcriptional regulator FJR48_RS04450 PF01205 Uncharacterized protein family UPF0029 FJR48_RS04450 PF09186 Domain of unknown function (DUF1949) FJR48_RS04455 PF00482 Type II secretion system (T2SS), protein F FJR48_RS04460 PF00437 Type II/IV secretion system protein FJR48_RS04460 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain FJR48_RS04480 PF00263 Bacterial type II and III secretion system protein FJR48_RS04480 PF03958 Bacterial type II/III secretion system short domain FJR48_RS04510 PF01926 50S ribosome-binding GTPase FJR48_RS04510 PF07650 KH domain FJR48_RS04515 PF07724 AAA domain (Cdc48 subfamily) FJR48_RS04515 PF10431 C-terminal, D2-small domain, of ClpB protein FJR48_RS04520 PF00227 Proteasome subunit FJR48_RS04525 PF01281 Ribosomal protein L9, N-terminal domain FJR48_RS04525 PF03948 Ribosomal protein L9, C-terminal domain FJR48_RS04535 PF00764 Arginosuccinate synthase FJR48_RS04565 PF01554 MatE FJR48_RS04570 PF00563 EAL domain FJR48_RS04570 PF10442 FIST C domain FJR48_RS04570 PF00990 Diguanylate cyclase, GGDEF domain FJR48_RS04570 PF08495 FIST N domain FJR48_RS04575 PF12826 Helix-hairpin-helix motif FJR48_RS04575 PF03120 NAD-dependent DNA ligase OB-fold domain FJR48_RS04575 PF01653 NAD-dependent DNA ligase adenylation domain FJR48_RS04575 PF00533 BRCA1 C Terminus (BRCT) domain FJR48_RS04585 PF01728 FtsJ-like methyltransferase FJR48_RS04585 PF01479 S4 domain FJR48_RS04590 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB FJR48_RS04600 PF06574 FAD synthetase FJR48_RS04600 PF01687 Riboflavin kinase FJR48_RS04605 PF01142 tRNA pseudouridine synthase D (TruD) FJR48_RS04620 PF01966 HD domain FJR48_RS04635 PF03707 Bacterial signalling protein N terminal repeat FJR48_RS04635 PF00990 Diguanylate cyclase, GGDEF domain FJR48_RS04635 PF00563 EAL domain FJR48_RS04650 PF00011 Hsp20/alpha crystallin family FJR48_RS04660 PF02567 Phenazine biosynthesis-like protein FJR48_RS04665 PF02934 GatB/GatE catalytic domain FJR48_RS04665 PF02637 GatB domain FJR48_RS04670 PF02254 TrkA-N domain FJR48_RS04670 PF07885 Ion channel FJR48_RS04680 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus FJR48_RS04680 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus FJR48_RS04685 PF00939 Sodium:sulfate symporter transmembrane region FJR48_RS04695 PF05547 Immune inhibitor A peptidase M6 FJR48_RS04695 PF00801 PKD domain FJR48_RS04730 PF01435 Peptidase family M48 FJR48_RS04730 PF16491 CAAX prenyl protease N-terminal, five membrane helices FJR48_RS04745 PF00348 Polyprenyl synthetase FJR48_RS04750 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain FJR48_RS04750 PF01488 Shikimate / quinate 5-dehydrogenase FJR48_RS04750 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain FJR48_RS04755 PF03129 Anticodon binding domain FJR48_RS04755 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FJR48_RS04770 PF03900 Porphobilinogen deaminase, C-terminal domain FJR48_RS04770 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain FJR48_RS04800 PF00672 HAMP domain FJR48_RS04800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FJR48_RS04800 PF16591 Helical bimodular sensor domain FJR48_RS04815 PF07726 ATPase family associated with various cellular activities (AAA) FJR48_RS04815 PF17863 AAA lid domain FJR48_RS04820 PF01882 Protein of unknown function DUF58 FJR48_RS04835 PF13519 von Willebrand factor type A domain FJR48_RS04845 PF02635 DsrE/DsrF-like family FJR48_RS04860 PF13533 Biotin-lipoyl like FJR48_RS04865 PF00005 ABC transporter FJR48_RS04875 PF02153 Prephenate dehydrogenase FJR48_RS04875 PF01842 ACT domain FJR48_RS04880 PF07244 Surface antigen variable number repeat FJR48_RS04880 PF01103 Surface antigen FJR48_RS04890 PF00037 4Fe-4S binding domain FJR48_RS04895 PF00512 His Kinase A (phospho-acceptor) domain FJR48_RS04895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJR48_RS04895 PF08521 Two-component sensor kinase N-terminal FJR48_RS04900 PF00486 Transcriptional regulatory protein, C terminal FJR48_RS04900 PF00072 Response regulator receiver domain FJR48_RS04910 PF02660 Glycerol-3-phosphate acyltransferase FJR48_RS04920 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FJR48_RS04925 PF02445 Quinolinate synthetase A protein FJR48_RS04930 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain FJR48_RS04930 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain FJR48_RS04955 PF01627 Hpt domain FJR48_RS04955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJR48_RS04955 PF00672 HAMP domain FJR48_RS04955 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FJR48_RS04955 PF00072 Response regulator receiver domain FJR48_RS04955 PF00512 His Kinase A (phospho-acceptor) domain FJR48_RS04965 PF01747 ATP-sulfurylase FJR48_RS04965 PF14306 PUA-like domain FJR48_RS04970 PF00072 Response regulator receiver domain FJR48_RS04970 PF00486 Transcriptional regulatory protein, C terminal FJR48_RS04975 PF02542 YgbB family FJR48_RS04975 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase FJR48_RS04980 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase FJR48_RS04990 PF00206 Lyase FJR48_RS04990 PF14698 Argininosuccinate lyase C-terminal FJR48_RS05000 PF01464 Transglycosylase SLT domain FJR48_RS05000 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain FJR48_RS05005 PF01230 HIT domain FJR48_RS05010 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain FJR48_RS05010 PF01409 tRNA synthetases class II core domain (F) FJR48_RS05015 PF03484 tRNA synthetase B5 domain FJR48_RS05015 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain FJR48_RS05015 PF01588 Putative tRNA binding domain FJR48_RS05015 PF03147 Ferredoxin-fold anticodon binding domain FJR48_RS05020 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FJR48_RS05025 PF02401 LytB protein FJR48_RS05030 PF00575 S1 RNA binding domain FJR48_RS05040 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FJR48_RS05040 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FJR48_RS05040 PF01842 ACT domain FJR48_RS05045 PF00873 AcrB/AcrD/AcrF family FJR48_RS05050 PF00873 AcrB/AcrD/AcrF family FJR48_RS05055 PF13533 Biotin-lipoyl like FJR48_RS05075 PF03309 Type III pantothenate kinase FJR48_RS05080 PF01634 ATP phosphoribosyltransferase FJR48_RS05100 PF04166 Pyridoxal phosphate biosynthetic protein PdxA FJR48_RS05105 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ FJR48_RS05110 PF01553 Acyltransferase FJR48_RS05115 PF03190 Protein of unknown function, DUF255 FJR48_RS05130 PF11412 Disulphide bond corrector protein DsbC FJR48_RS05130 PF02683 Cytochrome C biogenesis protein transmembrane region FJR48_RS05140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJR48_RS05145 PF00149 Calcineurin-like phosphoesterase FJR48_RS05150 PF02684 Lipid-A-disaccharide synthetase FJR48_RS05160 PF01979 Amidohydrolase family FJR48_RS05165 PF01915 Glycosyl hydrolase family 3 C-terminal domain FJR48_RS05165 PF00933 Glycosyl hydrolase family 3 N terminal domain FJR48_RS05170 PF00474 Sodium:solute symporter family FJR48_RS05180 PF03702 Anhydro-N-acetylmuramic acid kinase FJR48_RS05185 PF01636 Phosphotransferase enzyme family FJR48_RS05190 PF00483 Nucleotidyl transferase FJR48_RS05200 PF03150 Di-haem cytochrome c peroxidase FJR48_RS05200 PF00034 Cytochrome c FJR48_RS05200 PF14376 Haem-binding domain FJR48_RS05205 PF00563 EAL domain FJR48_RS05205 PF03707 Bacterial signalling protein N terminal repeat FJR48_RS05205 PF00990 Diguanylate cyclase, GGDEF domain FJR48_RS05210 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FJR48_RS05215 PF01702 Queuine tRNA-ribosyltransferase FJR48_RS05220 PF08207 Elongation factor P (EF-P) KOW-like domain FJR48_RS05220 PF01132 Elongation factor P (EF-P) OB domain FJR48_RS05220 PF09285 Elongation factor P, C-terminal FJR48_RS05225 PF00563 EAL domain FJR48_RS05225 PF03707 Bacterial signalling protein N terminal repeat FJR48_RS05225 PF00990 Diguanylate cyclase, GGDEF domain FJR48_RS05230 PF13426 PAS domain FJR48_RS05230 PF08447 PAS fold FJR48_RS05230 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FJR48_RS05240 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FJR48_RS05240 PF07733 Bacterial DNA polymerase III alpha NTPase domain FJR48_RS05240 PF14579 Helix-hairpin-helix motif FJR48_RS05240 PF02811 PHP domain FJR48_RS05245 PF12833 Helix-turn-helix domain FJR48_RS05245 PF00072 Response regulator receiver domain FJR48_RS05250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJR48_RS05250 PF08447 PAS fold FJR48_RS05250 PF08448 PAS fold FJR48_RS05255 PF08769 Sporulation initiation factor Spo0A C terminal FJR48_RS05255 PF00072 Response regulator receiver domain FJR48_RS05265 PF02127 Aminopeptidase I zinc metalloprotease (M18) FJR48_RS05270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJR48_RS05270 PF00512 His Kinase A (phospho-acceptor) domain FJR48_RS05290 PF01578 Cytochrome C assembly protein FJR48_RS05290 PF05140 ResB-like family FJR48_RS05300 PF00762 Ferrochelatase FJR48_RS05305 PF13419 Haloacid dehalogenase-like hydrolase FJR48_RS05315 PF00563 EAL domain FJR48_RS05315 PF08448 PAS fold FJR48_RS05315 PF00990 Diguanylate cyclase, GGDEF domain FJR48_RS05320 PF03061 Thioesterase superfamily FJR48_RS05335 PF08495 FIST N domain FJR48_RS05335 PF10442 FIST C domain FJR48_RS05335 PF00563 EAL domain FJR48_RS05335 PF00990 Diguanylate cyclase, GGDEF domain FJR48_RS05340 PF09308 LuxQ, periplasmic FJR48_RS05340 PF00512 His Kinase A (phospho-acceptor) domain FJR48_RS05340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJR48_RS05340 PF00072 Response regulator receiver domain FJR48_RS05350 PF02092 Glycyl-tRNA synthetase beta subunit FJR48_RS05355 PF05430 S-adenosyl-L-methionine-dependent methyltransferase FJR48_RS05355 PF01266 FAD dependent oxidoreductase FJR48_RS05360 PF00990 Diguanylate cyclase, GGDEF domain FJR48_RS05370 PF02698 DUF218 domain FJR48_RS05375 PF08713 DNA alkylation repair enzyme FJR48_RS05380 PF01464 Transglycosylase SLT domain FJR48_RS05380 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain FJR48_RS05420 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system FJR48_RS05440 PF02687 FtsX-like permease family FJR48_RS05440 PF12704 MacB-like periplasmic core domain FJR48_RS05445 PF00005 ABC transporter FJR48_RS05450 PF01416 tRNA pseudouridine synthase FJR48_RS05460 PF01478 Type IV leader peptidase family FJR48_RS05460 PF06750 Bacterial Peptidase A24 N-terminal domain FJR48_RS05465 PF01255 Putative undecaprenyl diphosphate synthase FJR48_RS05470 PF04127 DNA / pantothenate metabolism flavoprotein FJR48_RS05470 PF02441 Flavoprotein FJR48_RS05475 PF00132 Bacterial transferase hexapeptide (six repeats) FJR48_RS05475 PF12804 MobA-like NTP transferase domain FJR48_RS05480 PF01618 MotA/TolQ/ExbB proton channel family FJR48_RS05485 PF13677 Membrane MotB of proton-channel complex MotA/MotB FJR48_RS05485 PF00691 OmpA family FJR48_RS05490 PF00813 FliP family FJR48_RS05495 PF05958 tRNA (Uracil-5-)-methyltransferase FJR48_RS05510 PF01761 3-dehydroquinate synthase FJR48_RS05520 PF00919 Uncharacterized protein family UPF0004 FJR48_RS05520 PF04055 Radical SAM superfamily FJR48_RS05525 PF00004 ATPase family associated with various cellular activities (AAA) FJR48_RS05525 PF01434 Peptidase family M41 FJR48_RS05525 PF17862 AAA+ lid domain FJR48_RS05535 PF00994 Probable molybdopterin binding domain FJR48_RS05540 PF00912 Transglycosylase FJR48_RS05555 PF03372 Endonuclease/Exonuclease/phosphatase family FJR48_RS05560 PF02754 Cysteine-rich domain FJR48_RS05565 PF13085 2Fe-2S iron-sulfur cluster binding domain FJR48_RS05565 PF13183 4Fe-4S dicluster domain FJR48_RS05570 PF02910 Fumarate reductase flavoprotein C-term FJR48_RS05570 PF00890 FAD binding domain FJR48_RS05585 PF01142 tRNA pseudouridine synthase D (TruD) FJR48_RS05590 PF02666 Phosphatidylserine decarboxylase FJR48_RS05600 PF01926 50S ribosome-binding GTPase FJR48_RS05600 PF06071 Protein of unknown function (DUF933) FJR48_RS05610 PF00883 Cytosol aminopeptidase family, catalytic domain FJR48_RS05610 PF02789 Cytosol aminopeptidase family, N-terminal domain FJR48_RS05615 PF00990 Diguanylate cyclase, GGDEF domain FJR48_RS05615 PF05230 MASE2 domain FJR48_RS05620 PF00291 Pyridoxal-phosphate dependent enzyme FJR48_RS05625 PF00156 Phosphoribosyl transferase domain FJR48_RS05635 PF02502 Ribose/Galactose Isomerase FJR48_RS05640 PF02163 Peptidase family M50 FJR48_RS05645 PF10502 Signal peptidase, peptidase S26 FJR48_RS05650 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain FJR48_RS05650 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain FJR48_RS05670 PF00939 Sodium:sulfate symporter transmembrane region FJR48_RS05680 PF00202 Aminotransferase class-III FJR48_RS05700 PF00140 Sigma-70 factor, region 1.2 FJR48_RS05700 PF04542 Sigma-70 region 2 FJR48_RS05700 PF04539 Sigma-70 region 3 FJR48_RS05700 PF04545 Sigma-70, region 4 FJR48_RS05705 PF00460 Flagella basal body rod protein FJR48_RS05705 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FJR48_RS05710 PF00460 Flagella basal body rod protein FJR48_RS05710 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FJR48_RS05720 PF00694 Aconitase C-terminal domain FJR48_RS05725 PF00180 Isocitrate/isopropylmalate dehydrogenase FJR48_RS05740 PF00551 Formyl transferase FJR48_RS05740 PF01842 ACT domain FJR48_RS05745 PF00588 SpoU rRNA Methylase family FJR48_RS05765 PF14602 Hexapeptide repeat of succinyl-transferase FJR48_RS05765 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle FJR48_RS05800 PF02938 GAD domain FJR48_RS05800 PF00152 tRNA synthetases class II (D, K and N) FJR48_RS05800 PF01336 OB-fold nucleic acid binding domain FJR48_RS05805 PF01513 ATP-NAD kinase FJR48_RS05810 PF13476 AAA domain FJR48_RS05815 PF01026 TatD related DNase FJR48_RS05825 PF03330 Lytic transglycolase FJR48_RS05825 PF05036 Sporulation related domain FJR48_RS05830 PF00475 Imidazoleglycerol-phosphate dehydratase FJR48_RS05850 PF01926 50S ribosome-binding GTPase FJR48_RS05855 PF00583 Acetyltransferase (GNAT) family FJR48_RS05855 PF00696 Amino acid kinase family FJR48_RS05865 PF03717 Penicillin-binding Protein dimerisation domain FJR48_RS05865 PF00905 Penicillin binding protein transpeptidase domain FJR48_RS05870 PF01699 Sodium/calcium exchanger protein FJR48_RS05875 PF02130 Uncharacterized protein family UPF0054 FJR48_RS05885 PF06508 Queuosine biosynthesis protein QueC FJR48_RS05895 PF03480 Bacterial extracellular solute-binding protein, family 7 FJR48_RS05905 PF00133 tRNA synthetases class I (I, L, M and V) FJR48_RS05905 PF09334 tRNA synthetases class I (M) FJR48_RS05905 PF01588 Putative tRNA binding domain FJR48_RS05920 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain FJR48_RS05925 PF03205 Molybdopterin guanine dinucleotide synthesis protein B FJR48_RS05940 PF00749 tRNA synthetases class I (E and Q), catalytic domain FJR48_RS05950 PF00072 Response regulator receiver domain FJR48_RS05950 PF01966 HD domain FJR48_RS05960 PF07992 Pyridine nucleotide-disulphide oxidoreductase FJR48_RS05970 PF00440 Bacterial regulatory proteins, tetR family FJR48_RS05980 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FJR48_RS05985 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase FJR48_RS05985 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II FJR48_RS05985 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg FJR48_RS05995 PF00549 CoA-ligase FJR48_RS05995 PF02629 CoA binding domain FJR48_RS06000 PF08442 ATP-grasp domain FJR48_RS06000 PF00549 CoA-ligase FJR48_RS06005 PF00206 Lyase FJR48_RS06005 PF10415 Fumarase C C-terminus FJR48_RS06010 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain FJR48_RS06010 PF00056 lactate/malate dehydrogenase, NAD binding domain FJR48_RS06015 PF03971 Monomeric isocitrate dehydrogenase FJR48_RS06030 PF02687 FtsX-like permease family FJR48_RS06030 PF12704 MacB-like periplasmic core domain FJR48_RS06035 PF00271 Helicase conserved C-terminal domain FJR48_RS06035 PF07516 SecA Wing and Scaffold domain FJR48_RS06035 PF01043 SecA preprotein cross-linking domain FJR48_RS06035 PF07517 SecA DEAD-like domain FJR48_RS06035 PF02810 SEC-C motif FJR48_RS06045 PF12823 Domain of unknown function (DUF3817) FJR48_RS06050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJR48_RS06050 PF00512 His Kinase A (phospho-acceptor) domain FJR48_RS06050 PF09308 LuxQ, periplasmic FJR48_RS06050 PF00072 Response regulator receiver domain FJR48_RS06065 PF00034 Cytochrome c FJR48_RS06065 PF03150 Di-haem cytochrome c peroxidase FJR48_RS06070 PF00330 Aconitase family (aconitate hydratase) FJR48_RS06070 PF06434 Aconitate hydratase 2 N-terminus FJR48_RS06070 PF11791 Aconitate B N-terminal domain FJR48_RS06085 PF01145 SPFH domain / Band 7 family FJR48_RS06085 PF16200 C-terminal region of band_7 FJR48_RS06100 PF17854 FtsK alpha domain FJR48_RS06100 PF01580 FtsK/SpoIIIE family FJR48_RS06100 PF09397 Ftsk gamma domain FJR48_RS06105 PF00700 Bacterial flagellin C-terminal helical region FJR48_RS06105 PF00669 Bacterial flagellin N-terminal helical region FJR48_RS06130 PF02441 Flavoprotein FJR48_RS06135 PF01467 Cytidylyltransferase-like FJR48_RS06140 PF02223 Thymidylate kinase FJR48_RS06145 PF00654 Voltage gated chloride channel FJR48_RS06150 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FJR48_RS06150 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FJR48_RS06155 PF03129 Anticodon binding domain FJR48_RS06155 PF13393 Histidyl-tRNA synthetase FJR48_RS06160 PF17810 Arginine decarboxylase helical bundle domain FJR48_RS06160 PF17944 Arginine decarboxylase C-terminal helical extension FJR48_RS06160 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FJR48_RS06165 PF06426 Serine acetyltransferase, N-terminal FJR48_RS06165 PF00132 Bacterial transferase hexapeptide (six repeats) FJR48_RS06170 PF00155 Aminotransferase class I and II FJR48_RS06180 PF00132 Bacterial transferase hexapeptide (six repeats) FJR48_RS06180 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD FJR48_RS06185 PF10369 Small subunit of acetolactate synthase FJR48_RS06190 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FJR48_RS06190 PF00205 Thiamine pyrophosphate enzyme, central domain FJR48_RS06190 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FJR48_RS06200 PF13291 ACT domain FJR48_RS06200 PF00291 Pyridoxal-phosphate dependent enzyme FJR48_RS06205 PF13380 CoA binding domain FJR48_RS06210 PF00072 Response regulator receiver domain FJR48_RS06210 PF00990 Diguanylate cyclase, GGDEF domain FJR48_RS06220 PF00309 Sigma-54 factor, Activator interacting domain (AID) FJR48_RS06220 PF04963 Sigma-54 factor, core binding domain FJR48_RS06220 PF04552 Sigma-54, DNA binding domain FJR48_RS06225 PF00005 ABC transporter FJR48_RS06225 PF12399 Branched-chain amino acid ATP-binding cassette transporter FJR48_RS06230 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE FJR48_RS06235 PF02885 Glycosyl transferase family, helical bundle domain FJR48_RS06235 PF00591 Glycosyl transferase family, a/b domain FJR48_RS06240 PF01479 S4 domain FJR48_RS06245 PF08497 Radical SAM N-terminal FJR48_RS06245 PF04055 Radical SAM superfamily FJR48_RS06250 PF00501 AMP-binding enzyme FJR48_RS06260 PF08447 PAS fold FJR48_RS06260 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FJR48_RS06265 PF01368 DHH family FJR48_RS06265 PF02833 DHHA2 domain FJR48_RS06285 PF00005 ABC transporter FJR48_RS06285 PF17755 UvrA DNA-binding domain FJR48_RS06285 PF17760 UvrA interaction domain FJR48_RS06290 PF01925 Sulfite exporter TauE/SafE FJR48_RS06300 PF04509 CheC-like family FJR48_RS06300 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FJR48_RS06315 PF01207 Dihydrouridine synthase (Dus) FJR48_RS06330 PF02590 Predicted SPOUT methyltransferase FJR48_RS06335 PF02581 Thiamine monophosphate synthase FJR48_RS06340 PF17848 Acetyl-coA carboxylase zinc finger domain FJR48_RS06340 PF01039 Carboxyl transferase domain FJR48_RS06345 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FJR48_RS06345 PF07992 Pyridine nucleotide-disulphide oxidoreductase FJR48_RS06350 PF00310 Glutamine amidotransferases class-II FJR48_RS06350 PF04898 Glutamate synthase central domain FJR48_RS06350 PF01493 GXGXG motif FJR48_RS06350 PF01645 Conserved region in glutamate synthase FJR48_RS06360 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FJR48_RS06370 PF16653 Saccharopine dehydrogenase C-terminal domain FJR48_RS06370 PF03435 Saccharopine dehydrogenase NADP binding domain FJR48_RS06390 PF00925 GTP cyclohydrolase II FJR48_RS06390 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FJR48_RS06415 PF18766 SWI2/SNF2 ATPase FJR48_RS06415 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) FJR48_RS06415 PF11867 Domain of unknown function (DUF3387) FJR48_RS06420 PF12728 Helix-turn-helix domain FJR48_RS06420 PF02661 Fic/DOC family FJR48_RS06435 PF01420 Type I restriction modification DNA specificity domain FJR48_RS06440 PF02384 N-6 DNA Methylase FJR48_RS06485 PF06067 Domain of unknown function (DUF932) FJR48_RS06510 PF02661 Fic/DOC family FJR48_RS06510 PF17841 BID domain of Bartonella effector protein (Bep) FJR48_RS06540 PF00589 Phage integrase family FJR48_RS06540 PF14659 Phage integrase, N-terminal SAM-like domain FJR48_RS06555 PF00005 ABC transporter FJR48_RS06560 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FJR48_RS06565 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FJR48_RS06570 PF01230 HIT domain FJR48_RS06575 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FJR48_RS06585 PF01225 Mur ligase family, catalytic domain FJR48_RS06585 PF02875 Mur ligase family, glutamate ligase domain FJR48_RS06585 PF08245 Mur ligase middle domain FJR48_RS06595 PF01820 D-ala D-ala ligase N-terminus FJR48_RS06595 PF07478 D-ala D-ala ligase C-terminus FJR48_RS06605 PF01330 RuvA N terminal domain FJR48_RS06605 PF07499 RuvA, C-terminal domain FJR48_RS06615 PF03023 Lipid II flippase MurJ FJR48_RS06620 PF01406 tRNA synthetases class I (C) catalytic domain FJR48_RS06640 PF00873 AcrB/AcrD/AcrF family FJR48_RS06645 PF10672 S-adenosylmethionine-dependent methyltransferase FJR48_RS06645 PF17785 PUA-like domain FJR48_RS06665 PF01180 Dihydroorotate dehydrogenase FJR48_RS06670 PF00675 Insulinase (Peptidase family M16) FJR48_RS06670 PF05193 Peptidase M16 inactive domain FJR48_RS06680 PF05191 Adenylate kinase, active site lid FJR48_RS06685 PF12848 ABC transporter FJR48_RS06685 PF00005 ABC transporter FJR48_RS06700 PF00749 tRNA synthetases class I (E and Q), catalytic domain FJR48_RS06700 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain FJR48_RS06710 PF01717 Cobalamin-independent synthase, Catalytic domain FJR48_RS06710 PF08267 Cobalamin-independent synthase, N-terminal domain FJR48_RS06715 PF00701 Dihydrodipicolinate synthetase family FJR48_RS06730 PF01066 CDP-alcohol phosphatidyltransferase FJR48_RS06735 PF17820 PDZ domain FJR48_RS06735 PF02163 Peptidase family M50 FJR48_RS06740 PF01168 Alanine racemase, N-terminal domain FJR48_RS06765 PF08448 PAS fold FJR48_RS06765 PF00990 Diguanylate cyclase, GGDEF domain FJR48_RS06770 PF02581 Thiamine monophosphate synthase FJR48_RS06775 PF00476 DNA polymerase family A FJR48_RS06775 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain FJR48_RS06775 PF01367 5'-3' exonuclease, C-terminal SAM fold FJR48_RS06800 PF00589 Phage integrase family FJR48_RS06800 PF02899 Phage integrase, N-terminal SAM-like domain FJR48_RS06805 PF15437 Plasminogen-binding protein pgbA C-terminal FJR48_RS06815 PF02686 Glu-tRNAGln amidotransferase C subunit FJR48_RS06820 PF00437 Type II/IV secretion system protein FJR48_RS06825 PF07715 TonB-dependent Receptor Plug Domain FJR48_RS06825 PF00593 TonB dependent receptor FJR48_RS06830 PF01618 MotA/TolQ/ExbB proton channel family FJR48_RS06835 PF02472 Biopolymer transport protein ExbD/TolR FJR48_RS06855 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component FJR48_RS06860 PF01869 BadF/BadG/BcrA/BcrD ATPase family FJR48_RS06865 PF00873 AcrB/AcrD/AcrF family FJR48_RS06885 PF00202 Aminotransferase class-III FJR48_RS06900 PF00072 Response regulator receiver domain FJR48_RS06900 PF01584 CheW-like domain FJR48_RS06905 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit FJR48_RS06910 PF00682 HMGL-like FJR48_RS06910 PF00364 Biotin-requiring enzyme FJR48_RS06910 PF02436 Conserved carboxylase domain FJR48_RS06935 PF00183 Hsp90 protein FJR48_RS06950 PF03824 High-affinity nickel-transport protein FJR48_RS06965 PF16326 ABC transporter C-terminal domain FJR48_RS06965 PF00005 ABC transporter FJR48_RS06965 PF12848 ABC transporter FJR48_RS06975 PF01474 Class-II DAHP synthetase family FJR48_RS06980 PF00990 Diguanylate cyclase, GGDEF domain FJR48_RS06990 PF01475 Ferric uptake regulator family FJR48_RS06995 PF00152 tRNA synthetases class II (D, K and N) FJR48_RS06995 PF01336 OB-fold nucleic acid binding domain FJR48_RS07000 PF00464 Serine hydroxymethyltransferase FJR48_RS07015 PF00425 chorismate binding enzyme FJR48_RS07015 PF04715 Anthranilate synthase component I, N terminal region FJR48_RS07020 PF08501 Shikimate dehydrogenase substrate binding domain FJR48_RS07035 PF13662 Toprim domain FJR48_RS07035 PF02132 RecR protein FJR48_RS07040 PF06725 3D domain FJR48_RS07040 PF03562 MltA specific insert domain FJR48_RS07045 PF00684 DnaJ central domain FJR48_RS07045 PF01556 DnaJ C terminal domain FJR48_RS07045 PF00226 DnaJ domain FJR48_RS07060 PF01618 MotA/TolQ/ExbB proton channel family FJR48_RS07070 PF00202 Aminotransferase class-III FJR48_RS07085 PF02491 SHS2 domain inserted in FTSA FJR48_RS07090 PF12327 FtsZ family, C-terminal domain FJR48_RS07090 PF00091 Tubulin/FtsZ family, GTPase domain FJR48_RS07100 PF00005 ABC transporter FJR48_RS07120 PF17827 PrmC N-terminal domain FJR48_RS07120 PF05175 Methyltransferase small domain FJR48_RS07125 PF00696 Amino acid kinase family FJR48_RS07130 PF02606 Tetraacyldisaccharide-1-P 4'-kinase FJR48_RS07145 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FJR48_RS07150 PF02540 NAD synthase FJR48_RS07155 PF10417 C-terminal domain of 1-Cys peroxiredoxin FJR48_RS07155 PF00578 AhpC/TSA family FJR48_RS07160 PF04305 Protein of unknown function (DUF455) FJR48_RS07175 PF01008 Initiation factor 2 subunit family FJR48_RS07175 PF03061 Thioesterase superfamily FJR48_RS07180 PF08003 Protein of unknown function (DUF1698) FJR48_RS07185 PF16916 Dimerisation domain of Zinc Transporter FJR48_RS07185 PF01545 Cation efflux family FJR48_RS07190 PF01966 HD domain FJR48_RS07190 PF00013 KH domain FJR48_RS07190 PF12072 Domain of unknown function (DUF3552) FJR48_RS07200 PF08534 Redoxin FJR48_RS07205 PF00448 SRP54-type protein, GTPase domain FJR48_RS07210 PF01312 FlhB HrpN YscU SpaS Family FJR48_RS07225 PF01209 ubiE/COQ5 methyltransferase family FJR48_RS07230 PF01872 RibD C-terminal domain FJR48_RS07230 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FJR48_RS07235 PF02576 RimP N-terminal domain FJR48_RS07235 PF17384 RimP C-terminal SH3 domain FJR48_RS07240 PF02033 Ribosome-binding factor A FJR48_RS07245 PF04760 Translation initiation factor IF-2, N-terminal region FJR48_RS07245 PF11987 Translation-initiation factor 2 FJR48_RS07245 PF00009 Elongation factor Tu GTP binding domain FJR48_RS07255 PF08544 GHMP kinases C terminal FJR48_RS07255 PF00288 GHMP kinases N terminal domain FJR48_RS07265 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase FJR48_RS07280 PF01312 FlhB HrpN YscU SpaS Family FJR48_RS07285 PF03747 ADP-ribosylglycohydrolase FJR48_RS07315 PF00924 Mechanosensitive ion channel FJR48_RS07320 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase FJR48_RS07320 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain FJR48_RS07325 PF13183 4Fe-4S dicluster domain FJR48_RS07325 PF13085 2Fe-2S iron-sulfur cluster binding domain FJR48_RS07330 PF02910 Fumarate reductase flavoprotein C-term FJR48_RS07330 PF00890 FAD binding domain FJR48_RS07335 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit FJR48_RS07340 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 FJR48_RS07345 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FJR48_RS07350 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit FJR48_RS07350 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit FJR48_RS07360 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region FJR48_RS07360 PF10531 SLBB domain FJR48_RS07360 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit FJR48_RS07365 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FJR48_RS07365 PF00384 Molybdopterin oxidoreductase FJR48_RS07365 PF01568 Molydopterin dinucleotide binding domain FJR48_RS07365 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region FJR48_RS07370 PF00146 NADH dehydrogenase FJR48_RS07375 PF12838 4Fe-4S dicluster domain FJR48_RS07380 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 FJR48_RS07385 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FJR48_RS07390 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FJR48_RS07390 PF00361 Proton-conducting membrane transporter FJR48_RS07395 PF00361 Proton-conducting membrane transporter FJR48_RS07400 PF00361 Proton-conducting membrane transporter FJR48_RS07405 PF08447 PAS fold FJR48_RS07405 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FJR48_RS07405 PF13426 PAS domain FJR48_RS07450 PF00313 'Cold-shock' DNA-binding domain FJR48_RS07455 PF08359 YsiA-like protein, C-terminal region FJR48_RS07455 PF00440 Bacterial regulatory proteins, tetR family FJR48_RS07470 PF00873 AcrB/AcrD/AcrF family FJR48_RS07490 PF00871 Acetokinase family FJR48_RS07495 PF07085 DRTGG domain FJR48_RS07495 PF01515 Phosphate acetyl/butaryl transferase FJR48_RS07500 PF08447 PAS fold FJR48_RS07500 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FJR48_RS07505 PF00563 EAL domain FJR48_RS07505 PF08495 FIST N domain FJR48_RS07505 PF00990 Diguanylate cyclase, GGDEF domain FJR48_RS07505 PF10442 FIST C domain FJR48_RS07515 PF06039 Malate:quinone oxidoreductase (Mqo) FJR48_RS07520 PF00005 ABC transporter FJR48_RS07520 PF12848 ABC transporter FJR48_RS07545 PF00583 Acetyltransferase (GNAT) family FJR48_RS07575 PF01343 Peptidase family S49 FJR48_RS07580 PF13742 OB-fold nucleic acid binding domain FJR48_RS07580 PF02601 Exonuclease VII, large subunit FJR48_RS07585 PF18073 Rubredoxin metal binding domain FJR48_RS07595 PF00484 Carbonic anhydrase FJR48_RS07600 PF03748 Flagellar basal body-associated protein FliL FJR48_RS07605 PF05362 Lon protease (S16) C-terminal proteolytic domain FJR48_RS07605 PF13654 AAA domain FJR48_RS07610 PF01648 4'-phosphopantetheinyl transferase superfamily FJR48_RS07615 PF02597 ThiS family FJR48_RS07615 PF05690 Thiazole biosynthesis protein ThiG FJR48_RS07630 PF00119 ATP synthase A chain FJR48_RS07635 PF00873 AcrB/AcrD/AcrF family FJR48_RS07645 PF01795 MraW methylase family FJR48_RS07650 PF00512 His Kinase A (phospho-acceptor) domain FJR48_RS07650 PF01627 Hpt domain FJR48_RS07650 PF00072 Response regulator receiver domain FJR48_RS07650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJR48_RS07655 PF00171 Aldehyde dehydrogenase family FJR48_RS07660 PF00696 Amino acid kinase family FJR48_RS07665 PF03807 NADP oxidoreductase coenzyme F420-dependent FJR48_RS07665 PF14748 Pyrroline-5-carboxylate reductase dimerisation FJR48_RS07670 PF00892 EamA-like transporter family FJR48_RS07675 PF00563 EAL domain FJR48_RS07675 PF00990 Diguanylate cyclase, GGDEF domain FJR48_RS07675 PF08448 PAS fold FJR48_RS07680 PF00291 Pyridoxal-phosphate dependent enzyme FJR48_RS07700 PF00005 ABC transporter FJR48_RS07705 PF02390 Putative methyltransferase FJR48_RS07715 PF00849 RNA pseudouridylate synthase FJR48_RS07715 PF01479 S4 domain FJR48_RS07720 PF01098 Cell cycle protein FJR48_RS07755 PF02464 Competence-damaged protein FJR48_RS07755 PF00994 Probable molybdopterin binding domain FJR48_RS07755 PF18146 Damage-inducible protein CinA KH domain FJR48_RS07760 PF00133 tRNA synthetases class I (I, L, M and V) FJR48_RS07760 PF08264 Anticodon-binding domain of tRNA FJR48_RS07770 PF03992 Antibiotic biosynthesis monooxygenase FJR48_RS07780 PF12833 Helix-turn-helix domain FJR48_RS07785 PF00905 Penicillin binding protein transpeptidase domain FJR48_RS07795 PF00004 ATPase family associated with various cellular activities (AAA) FJR48_RS07795 PF17862 AAA+ lid domain FJR48_RS07795 PF06480 FtsH Extracellular FJR48_RS07795 PF01434 Peptidase family M41 FJR48_RS07805 PF02896 PEP-utilising enzyme, TIM barrel domain FJR48_RS07805 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain FJR48_RS07805 PF00391 PEP-utilising enzyme, mobile domain FJR48_RS07815 PF00690 Cation transporter/ATPase, N-terminus FJR48_RS07815 PF00689 Cation transporting ATPase, C-terminus FJR48_RS07820 PF00690 Cation transporter/ATPase, N-terminus FJR48_RS07820 PF00689 Cation transporting ATPase, C-terminus FJR48_RS07825 PF01425 Amidase FJR48_RS07835 PF01047 MarR family FJR48_RS07840 PF00478 IMP dehydrogenase / GMP reductase domain FJR48_RS07840 PF00571 CBS domain FJR48_RS07845 PF06271 RDD family FJR48_RS07855 PF01053 Cys/Met metabolism PLP-dependent enzyme FJR48_RS07860 PF00561 alpha/beta hydrolase fold FJR48_RS07865 PF02609 Exonuclease VII small subunit FJR48_RS07875 PF00899 ThiF family FJR48_RS07885 PF00155 Aminotransferase class I and II FJR48_RS07895 PF01225 Mur ligase family, catalytic domain FJR48_RS07895 PF02875 Mur ligase family, glutamate ligase domain FJR48_RS07895 PF08245 Mur ligase middle domain FJR48_RS07900 PF02146 Sir2 family FJR48_RS07915 PF00488 MutS domain V FJR48_RS07915 PF01713 Smr domain FJR48_RS07930 PF01047 MarR family FJR48_RS07935 PF04264 YceI-like domain FJR48_RS07940 PF04011 LemA family FJR48_RS07965 PF12704 MacB-like periplasmic core domain FJR48_RS07965 PF02687 FtsX-like permease family FJR48_RS07965 PF00005 ABC transporter FJR48_RS07970 PF02687 FtsX-like permease family FJR48_RS07970 PF12704 MacB-like periplasmic core domain FJR48_RS07970 PF00005 ABC transporter FJR48_RS07975 PF00360 Phytochrome region FJR48_RS07975 PF00563 EAL domain FJR48_RS07975 PF01590 GAF domain FJR48_RS07975 PF00990 Diguanylate cyclase, GGDEF domain FJR48_RS07985 PF04073 Aminoacyl-tRNA editing domain FJR48_RS07990 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system FJR48_RS08000 PF00990 Diguanylate cyclase, GGDEF domain FJR48_RS08005 PF00580 UvrD/REP helicase N-terminal domain FJR48_RS08005 PF13361 UvrD-like helicase C-terminal domain FJR48_RS08010 PF12838 4Fe-4S dicluster domain FJR48_RS08015 PF12801 4Fe-4S binding domain FJR48_RS08015 PF13237 4Fe-4S dicluster domain FJR48_RS08025 PF00990 Diguanylate cyclase, GGDEF domain FJR48_RS08030 PF00133 tRNA synthetases class I (I, L, M and V) FJR48_RS08030 PF10458 Valyl tRNA synthetase tRNA binding arm FJR48_RS08030 PF08264 Anticodon-binding domain of tRNA FJR48_RS08035 PF00916 Sulfate permease family FJR48_RS08035 PF01740 STAS domain FJR48_RS08040 PF17200 Single Cache domain 2 FJR48_RS08040 PF00672 HAMP domain FJR48_RS08040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FJR48_RS08045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FJR48_RS08045 PF08447 PAS fold FJR48_RS08055 PF02107 Flagellar L-ring protein FJR48_RS08060 PF09424 Yqey-like protein FJR48_RS08065 PF00218 Indole-3-glycerol phosphate synthase FJR48_RS08075 PF03692 Putative zinc- or iron-chelating domain FJR48_RS08080 PF05175 Methyltransferase small domain FJR48_RS08085 PF02348 Cytidylyltransferase FJR48_RS08090 PF03705 CheR methyltransferase, all-alpha domain FJR48_RS08090 PF01739 CheR methyltransferase, SAM binding domain FJR48_RS08095 PF00072 Response regulator receiver domain FJR48_RS08095 PF01339 CheB methylesterase FJR48_RS08100 PF00312 Ribosomal protein S15 FJR48_RS08110 PF00771 FHIPEP family FJR48_RS08135 PF01520 N-acetylmuramoyl-L-alanine amidase FJR48_RS08135 PF11741 AMIN domain FJR48_RS08145 PF00579 tRNA synthetases class I (W and Y) FJR48_RS08145 PF01479 S4 domain FJR48_RS08150 PF13291 ACT domain FJR48_RS08150 PF04607 Region found in RelA / SpoT proteins FJR48_RS08150 PF02824 TGS domain FJR48_RS08160 PF00696 Amino acid kinase family FJR48_RS08165 PF01966 HD domain FJR48_RS08170 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FJR48_RS08170 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FJR48_RS08175 PF00384 Molybdopterin oxidoreductase FJR48_RS08175 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FJR48_RS08175 PF01568 Molydopterin dinucleotide binding domain FJR48_RS08180 PF13247 4Fe-4S dicluster domain FJR48_RS08180 PF12800 4Fe-4S binding domain FJR48_RS08180 PF09163 Formate dehydrogenase N, transmembrane FJR48_RS08185 PF07690 Major Facilitator Superfamily FJR48_RS08195 PF00384 Molybdopterin oxidoreductase FJR48_RS08195 PF01568 Molydopterin dinucleotide binding domain FJR48_RS08195 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FJR48_RS08195 PF04324 BFD-like [2Fe-2S] binding domain FJR48_RS08200 PF00005 ABC transporter FJR48_RS08205 PF00528 Binding-protein-dependent transport system inner membrane component FJR48_RS08210 PF00005 ABC transporter FJR48_RS08220 PF00069 Protein kinase domain FJR48_RS08220 PF03793 PASTA domain FJR48_RS08225 PF01432 Peptidase family M3 FJR48_RS08235 PF03167 Uracil DNA glycosylase superfamily FJR48_RS08265 PF03641 Possible lysine decarboxylase FJR48_RS08270 PF16973 Flagellar motor switch protein FliN N-terminal FJR48_RS08270 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FJR48_RS08275 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FJR48_RS08275 PF02154 Flagellar motor switch protein FliM FJR48_RS08280 PF04545 Sigma-70, region 4 FJR48_RS08280 PF04539 Sigma-70 region 3 FJR48_RS08280 PF04542 Sigma-70 region 2 FJR48_RS08290 PF10609 NUBPL iron-transfer P-loop NTPase FJR48_RS08295 PF00448 SRP54-type protein, GTPase domain FJR48_RS08300 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) FJR48_RS08305 PF01220 Dehydroquinase class II FJR48_RS08310 PF01979 Amidohydrolase family FJR48_RS08315 PF00360 Phytochrome region FJR48_RS08315 PF00563 EAL domain FJR48_RS08315 PF01590 GAF domain FJR48_RS08315 PF00990 Diguanylate cyclase, GGDEF domain FJR48_RS08330 PF00384 Molybdopterin oxidoreductase FJR48_RS08330 PF01568 Molydopterin dinucleotide binding domain FJR48_RS08330 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FJR48_RS08330 PF10518 TAT (twin-arginine translocation) pathway signal sequence FJR48_RS08335 PF12838 4Fe-4S dicluster domain FJR48_RS08335 PF12800 4Fe-4S binding domain FJR48_RS08340 PF13237 4Fe-4S dicluster domain FJR48_RS08340 PF12801 4Fe-4S binding domain FJR48_RS08380 PF00557 Metallopeptidase family M24 FJR48_RS08380 PF05195 Aminopeptidase P, N-terminal domain FJR48_RS08395 PF00005 ABC transporter FJR48_RS08400 PF02405 Permease MlaE FJR48_RS08405 PF01584 CheW-like domain FJR48_RS08410 PF02895 Signal transducing histidine kinase, homodimeric domain FJR48_RS08410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJR48_RS08410 PF01627 Hpt domain FJR48_RS08410 PF01584 CheW-like domain FJR48_RS08410 PF00072 Response regulator receiver domain FJR48_RS08415 PF01584 CheW-like domain FJR48_RS08415 PF00072 Response regulator receiver domain FJR48_RS08425 PF02774 Semialdehyde dehydrogenase, dimerisation domain FJR48_RS08425 PF01118 Semialdehyde dehydrogenase, NAD binding domain FJR48_RS08430 PF03449 Transcription elongation factor, N-terminal FJR48_RS08430 PF01272 Transcription elongation factor, GreA/GreB, C-term FJR48_RS08445 PF00899 ThiF family FJR48_RS08450 PF01975 Survival protein SurE FJR48_RS08470 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FJR48_RS08470 PF07498 Rho termination factor, N-terminal domain FJR48_RS08470 PF07497 Rho termination factor, RNA-binding domain FJR48_RS08475 PF01177 Asp/Glu/Hydantoin racemase FJR48_RS08485 PF12169 DNA polymerase III subunits gamma and tau domain III FJR48_RS08485 PF12170 DNA polymerase III tau subunit V interacting with alpha FJR48_RS08490 PF13493 Domain of unknown function (DUF4118) FJR48_RS08490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJR48_RS08490 PF02702 Osmosensitive K+ channel His kinase sensor domain FJR48_RS08490 PF00512 His Kinase A (phospho-acceptor) domain FJR48_RS08495 PF00486 Transcriptional regulatory protein, C terminal FJR48_RS08495 PF00072 Response regulator receiver domain FJR48_RS08505 PF13277 YmdB-like protein FJR48_RS08520 PF17757 UvrB interaction domain FJR48_RS08520 PF03461 TRCF domain FJR48_RS08520 PF00271 Helicase conserved C-terminal domain FJR48_RS08520 PF02559 CarD-like/TRCF domain FJR48_RS08520 PF00270 DEAD/DEAH box helicase FJR48_RS08530 PF01551 Peptidase family M23 FJR48_RS08530 PF04225 Opacity-associated protein A LysM-like domain FJR48_RS08535 PF08245 Mur ligase middle domain FJR48_RS08545 PF00990 Diguanylate cyclase, GGDEF domain FJR48_RS08555 PF00133 tRNA synthetases class I (I, L, M and V) FJR48_RS08555 PF09334 tRNA synthetases class I (M) FJR48_RS08555 PF13603 Leucyl-tRNA synthetase, Domain 2 FJR48_RS08565 PF02355 Protein export membrane protein FJR48_RS08565 PF07549 SecD/SecF GG Motif FJR48_RS08570 PF02355 Protein export membrane protein FJR48_RS08575 PF02699 Preprotein translocase subunit FJR48_RS08585 PF02503 Polyphosphate kinase middle domain FJR48_RS08585 PF13089 Polyphosphate kinase N-terminal domain FJR48_RS08585 PF17941 Polyphosphate kinase C-terminal domain 1 FJR48_RS08585 PF13090 Polyphosphate kinase C-terminal domain 2 FJR48_RS08590 PF00132 Bacterial transferase hexapeptide (six repeats) FJR48_RS08605 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FJR48_RS08605 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FJR48_RS08630 PF09299 Mu transposase, C-terminal FJR48_RS08630 PF00665 Integrase core domain FJR48_RS08670 PF01960 ArgJ family FJR48_RS08675 PF07885 Ion channel FJR48_RS08675 PF02254 TrkA-N domain FJR48_RS08680 PF00830 Ribosomal L28 family FJR48_RS08695 PF00834 Ribulose-phosphate 3 epimerase family FJR48_RS08700 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase FJR48_RS08705 PF00929 Exonuclease FJR48_RS08705 PF02811 PHP domain FJR48_RS08705 PF14579 Helix-hairpin-helix motif FJR48_RS08705 PF14480 DNA polymerase III polC-type N-terminus I FJR48_RS08705 PF11490 DNA polymerase III polC-type N-terminus II FJR48_RS08705 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FJR48_RS08705 PF07733 Bacterial DNA polymerase III alpha NTPase domain FJR48_RS08710 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit FJR48_RS08715 PF00109 Beta-ketoacyl synthase, N-terminal domain FJR48_RS08715 PF02801 Beta-ketoacyl synthase, C-terminal domain FJR48_RS08720 PF00550 Phosphopantetheine attachment site FJR48_RS08730 PF01676 Metalloenzyme superfamily FJR48_RS08730 PF06415 BPG-independent PGAM N-terminus (iPGM_N) FJR48_RS08735 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 FJR48_RS08735 PF00953 Glycosyl transferase family 4 FJR48_RS08740 PF08245 Mur ligase middle domain FJR48_RS08745 PF00551 Formyl transferase FJR48_RS08745 PF02911 Formyl transferase, C-terminal domain FJR48_RS08750 PF03458 UPF0126 domain FJR48_RS08765 PF00881 Nitroreductase family FJR48_RS08775 PF00990 Diguanylate cyclase, GGDEF domain FJR48_RS08790 PF01451 Low molecular weight phosphotyrosine protein phosphatase FJR48_RS08800 PF02040 Arsenical pump membrane protein FJR48_RS08810 PF00990 Diguanylate cyclase, GGDEF domain FJR48_RS08810 PF08448 PAS fold FJR48_RS08820 PF10431 C-terminal, D2-small domain, of ClpB protein FJR48_RS08820 PF02861 Clp amino terminal domain, pathogenicity island component FJR48_RS08820 PF17871 AAA lid domain FJR48_RS08820 PF07724 AAA domain (Cdc48 subfamily) FJR48_RS08820 PF00004 ATPase family associated with various cellular activities (AAA) FJR48_RS08830 PF00072 Response regulator receiver domain FJR48_RS08830 PF00486 Transcriptional regulatory protein, C terminal FJR48_RS08855 PF00633 Helix-hairpin-helix motif FJR48_RS08855 PF10576 Iron-sulfur binding domain of endonuclease III FJR48_RS08855 PF00730 HhH-GPD superfamily base excision DNA repair protein FJR48_RS08865 PF13649 Methyltransferase domain FJR48_RS08875 PF01116 Fructose-bisphosphate aldolase class-II FJR48_RS08900 PF00216 Bacterial DNA-binding protein FJR48_RS08910 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FJR48_RS08915 PF01384 Phosphate transporter family FJR48_RS08920 PF08534 Redoxin FJR48_RS08930 PF01568 Molydopterin dinucleotide binding domain FJR48_RS08930 PF00384 Molybdopterin oxidoreductase FJR48_RS08940 PF13247 4Fe-4S dicluster domain FJR48_RS08950 PF00815 Histidinol dehydrogenase FJR48_RS08960 PF01202 Shikimate kinase FJR48_RS08975 PF18793 Nitrous oxide reductase propeller repeat 2 FJR48_RS08975 PF13473 Cupredoxin-like domain FJR48_RS08975 PF18764 Nitrous oxide reductase propeller repeat FJR48_RS08980 PF03477 ATP cone domain FJR48_RS08980 PF02867 Ribonucleotide reductase, barrel domain FJR48_RS08980 PF00317 Ribonucleotide reductase, all-alpha domain FJR48_RS08995 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain FJR48_RS08995 PF00753 Metallo-beta-lactamase superfamily FJR48_RS08995 PF10996 Beta-Casp domain FJR48_RS09040 PF14659 Phage integrase, N-terminal SAM-like domain FJR48_RS09040 PF00589 Phage integrase family FJR48_RS09050 PF00137 ATP synthase subunit C FJR48_RS09055 PF03725 3' exoribonuclease family, domain 2 FJR48_RS09055 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain FJR48_RS09055 PF01138 3' exoribonuclease family, domain 1 FJR48_RS09055 PF00575 S1 RNA binding domain FJR48_RS09055 PF00013 KH domain FJR48_RS09075 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain FJR48_RS09075 PF02843 Phosphoribosylglycinamide synthetase, C domain FJR48_RS09075 PF02844 Phosphoribosylglycinamide synthetase, N domain FJR48_RS09080 PF00512 His Kinase A (phospho-acceptor) domain FJR48_RS09080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJR48_RS09080 PF18719 ArlS sensor domain FJR48_RS09085 PF00072 Response regulator receiver domain FJR48_RS09085 PF00158 Sigma-54 interaction domain FJR48_RS09090 PF00672 HAMP domain FJR48_RS09090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FJR48_RS09100 PF02540 NAD synthase FJR48_RS09100 PF00958 GMP synthase C terminal domain FJR48_RS09100 PF00117 Glutamine amidotransferase class-I FJR48_RS09105 PF03600 Citrate transporter FJR48_RS09110 PF00890 FAD binding domain FJR48_RS09120 PF08459 UvrC Helix-hairpin-helix N-terminal FJR48_RS09120 PF02151 UvrB/uvrC motif FJR48_RS09120 PF01541 GIY-YIG catalytic domain FJR48_RS09135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJR48_RS09135 PF01627 Hpt domain FJR48_RS09135 PF00072 Response regulator receiver domain FJR48_RS09135 PF00512 His Kinase A (phospho-acceptor) domain FJR48_RS09135 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FJR48_RS09135 PF00672 HAMP domain FJR48_RS09140 PF00072 Response regulator receiver domain FJR48_RS09150 PF02190 ATP-dependent protease La (LON) substrate-binding domain FJR48_RS09150 PF05362 Lon protease (S16) C-terminal proteolytic domain FJR48_RS09150 PF00004 ATPase family associated with various cellular activities (AAA) FJR48_RS09155 PF13525 Outer membrane lipoprotein FJR48_RS09160 PF02623 FliW protein FJR48_RS09185 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein FJR48_RS09185 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus FJR48_RS09190 PF04851 Type III restriction enzyme, res subunit FJR48_RS09190 PF00271 Helicase conserved C-terminal domain FJR48_RS09195 PF05193 Peptidase M16 inactive domain FJR48_RS09200 PF04055 Radical SAM superfamily FJR48_RS09215 PF01029 NusB family FJR48_RS09220 PF00885 6,7-dimethyl-8-ribityllumazine synthase FJR48_RS09225 PF00793 DAHP synthetase I family FJR48_RS09230 PF00892 EamA-like transporter family FJR48_RS09235 PF00291 Pyridoxal-phosphate dependent enzyme FJR48_RS09240 PF00226 DnaJ domain FJR48_RS09240 PF05099 Tellurite resistance protein TerB FJR48_RS09270 PF01926 50S ribosome-binding GTPase FJR48_RS09270 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal FJR48_RS09275 PF03653 Uncharacterised protein family (UPF0093) FJR48_RS09285 PF00579 tRNA synthetases class I (W and Y) FJR48_RS09300 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FJR48_RS09300 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FJR48_RS09305 PF00490 Delta-aminolevulinic acid dehydratase FJR48_RS09310 PF00925 GTP cyclohydrolase II FJR48_RS09320 PF00884 Sulfatase FJR48_RS09320 PF08019 Phosphoethanolamine transferase EptA/EptB FJR48_RS09325 PF00512 His Kinase A (phospho-acceptor) domain FJR48_RS09325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJR48_RS09325 PF00672 HAMP domain FJR48_RS09330 PF00072 Response regulator receiver domain FJR48_RS09330 PF00486 Transcriptional regulatory protein, C terminal FJR48_RS09335 PF01219 Prokaryotic diacylglycerol kinase FJR48_RS09340 PF00884 Sulfatase FJR48_RS09345 PF02527 rRNA small subunit methyltransferase G FJR48_RS09360 PF08448 PAS fold FJR48_RS09360 PF00563 EAL domain FJR48_RS09360 PF00990 Diguanylate cyclase, GGDEF domain FJR48_RS09365 PF00842 Alanine racemase, C-terminal domain FJR48_RS09365 PF01168 Alanine racemase, N-terminal domain FJR48_RS09370 PF04371 Porphyromonas-type peptidyl-arginine deiminase FJR48_RS09380 PF04551 GcpE protein FJR48_RS09385 PF03796 DnaB-like helicase C terminal domain FJR48_RS09385 PF00772 DnaB-like helicase N terminal domain FJR48_RS09405 PF01161 Phosphatidylethanolamine-binding protein FJR48_RS09410 PF08502 LeuA allosteric (dimerisation) domain FJR48_RS09410 PF00682 HMGL-like FJR48_RS09415 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FJR48_RS09415 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FJR48_RS09425 PF00034 Cytochrome c FJR48_RS09425 PF03150 Di-haem cytochrome c peroxidase FJR48_RS09440 PF03631 Virulence factor BrkB FJR48_RS09445 PF02913 FAD linked oxidases, C-terminal domain FJR48_RS09445 PF01565 FAD binding domain FJR48_RS09455 PF01464 Transglycosylase SLT domain FJR48_RS09455 PF01551 Peptidase family M23 FJR48_RS09455 PF10145 Phage-related minor tail protein FJR48_RS09460 PF00293 NUDIX domain FJR48_RS09465 PF11849 Domain of unknown function (DUF3369) FJR48_RS09470 PF02535 ZIP Zinc transporter FJR48_RS09475 PF00210 Ferritin-like domain FJR48_RS09485 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FJR48_RS09510 PF00042 Globin FJR48_RS09520 PF12344 Ultra-violet resistance protein B FJR48_RS09520 PF17757 UvrB interaction domain FJR48_RS09520 PF04851 Type III restriction enzyme, res subunit FJR48_RS09520 PF00271 Helicase conserved C-terminal domain FJR48_RS09520 PF02151 UvrB/uvrC motif FJR48_RS09550 PF04055 Radical SAM superfamily FJR48_RS09550 PF18693 TRAM domain FJR48_RS09550 PF00919 Uncharacterized protein family UPF0004 FJR48_RS09555 PF01171 PP-loop family FJR48_RS09575 PF02899 Phage integrase, N-terminal SAM-like domain FJR48_RS09575 PF00589 Phage integrase family FJR48_RS09585 PF04028 Domain of unknown function (DUF374) FJR48_RS09590 PF00919 Uncharacterized protein family UPF0004 FJR48_RS09590 PF01938 TRAM domain FJR48_RS09590 PF04055 Radical SAM superfamily FJR48_RS09600 PF13184 NusA-like KH domain FJR48_RS09600 PF08529 NusA N-terminal domain FJR48_RS09605 PF00528 Binding-protein-dependent transport system inner membrane component FJR48_RS09620 PF00121 Triosephosphate isomerase FJR48_RS09625 PF00162 Phosphoglycerate kinase FJR48_RS09630 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FJR48_RS09630 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FJR48_RS09635 PF01467 Cytidylyltransferase-like FJR48_RS09650 PF00497 Bacterial extracellular solute-binding proteins, family 3 FJR48_RS09650 PF01464 Transglycosylase SLT domain FJR48_RS09660 PF00486 Transcriptional regulatory protein, C terminal FJR48_RS09660 PF00072 Response regulator receiver domain FJR48_RS09665 PF07670 Nucleoside recognition FJR48_RS09665 PF02421 Ferrous iron transport protein B FJR48_RS09665 PF07664 Ferrous iron transport protein B C terminus FJR48_RS09680 PF00005 ABC transporter FJR48_RS09685 PF00528 Binding-protein-dependent transport system inner membrane component FJR48_RS09695 PF00593 TonB dependent receptor FJR48_RS09695 PF07715 TonB-dependent Receptor Plug Domain FJR48_RS09705 PF00873 AcrB/AcrD/AcrF family FJR48_RS09720 PF02514 CobN/Magnesium Chelatase FJR48_RS09720 PF11965 Domain of unknown function (DUF3479) FJR48_RS09725 PF00593 TonB dependent receptor FJR48_RS09725 PF07715 TonB-dependent Receptor Plug Domain FJR48_RS09730 PF07715 TonB-dependent Receptor Plug Domain FJR48_RS09730 PF00593 TonB dependent receptor FJR48_RS09745 PF00210 Ferritin-like domain FJR48_RS09760 PF00258 Flavodoxin FJR48_RS09765 PF00925 GTP cyclohydrolase II FJR48_RS09790 PF02472 Biopolymer transport protein ExbD/TolR FJR48_RS09795 PF01618 MotA/TolQ/ExbB proton channel family FJR48_RS09810 PF03150 Di-haem cytochrome c peroxidase FJR48_RS09820 PF04116 Fatty acid hydroxylase superfamily FJR48_RS09860 PF01066 CDP-alcohol phosphatidyltransferase FJR48_RS09870 PF00486 Transcriptional regulatory protein, C terminal FJR48_RS09870 PF00072 Response regulator receiver domain FJR48_RS09875 PF00210 Ferritin-like domain FJR48_RS09880 PF00873 AcrB/AcrD/AcrF family FJR48_RS09900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJR48_RS09900 PF08448 PAS fold FJR48_RS09900 PF08447 PAS fold FJR48_RS09905 PF02646 RmuC family FJR48_RS09910 PF00990 Diguanylate cyclase, GGDEF domain FJR48_RS09915 PF00270 DEAD/DEAH box helicase FJR48_RS09915 PF00271 Helicase conserved C-terminal domain FJR48_RS09925 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FJR48_RS09925 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FJR48_RS09930 PF02504 Fatty acid synthesis protein FJR48_RS09935 PF01783 Ribosomal L32p protein family FJR48_RS09945 PF00334 Nucleoside diphosphate kinase FJR48_RS09950 PF12838 4Fe-4S dicluster domain FJR48_RS09955 PF02773 S-adenosylmethionine synthetase, C-terminal domain FJR48_RS09955 PF02772 S-adenosylmethionine synthetase, central domain FJR48_RS09955 PF00438 S-adenosylmethionine synthetase, N-terminal domain FJR48_RS09960 PF10417 C-terminal domain of 1-Cys peroxiredoxin FJR48_RS09960 PF00578 AhpC/TSA family FJR48_RS09970 PF05970 PIF1-like helicase FJR48_RS09970 PF02689 Helicase FJR48_RS09975 PF13203 Putative metallopeptidase domain FJR48_RS09975 PF09967 VWA-like domain (DUF2201) FJR48_RS09990 PF06965 Na+/H+ antiporter 1 FJR48_RS09995 PF08447 PAS fold FJR48_RS09995 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FJR48_RS10000 PF16591 Helical bimodular sensor domain FJR48_RS10000 PF00672 HAMP domain FJR48_RS10000 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FJR48_RS10010 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FJR48_RS10010 PF13378 Enolase C-terminal domain-like FJR48_RS10030 PF00929 Exonuclease FJR48_RS10030 PF02811 PHP domain FJR48_RS10030 PF07733 Bacterial DNA polymerase III alpha NTPase domain FJR48_RS10030 PF14579 Helix-hairpin-helix motif FJR48_RS10030 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FJR48_RS10030 PF11490 DNA polymerase III polC-type N-terminus II FJR48_RS10035 PF00708 Acylphosphatase FJR48_RS10040 PF04983 RNA polymerase Rpb1, domain 3 FJR48_RS10040 PF00623 RNA polymerase Rpb1, domain 2 FJR48_RS10040 PF04997 RNA polymerase Rpb1, domain 1 FJR48_RS10040 PF05000 RNA polymerase Rpb1, domain 4 FJR48_RS10040 PF04998 RNA polymerase Rpb1, domain 5 FJR48_RS10045 PF04560 RNA polymerase Rpb2, domain 7 FJR48_RS10045 PF00562 RNA polymerase Rpb2, domain 6 FJR48_RS10045 PF04565 RNA polymerase Rpb2, domain 3 FJR48_RS10045 PF04561 RNA polymerase Rpb2, domain 2 FJR48_RS10045 PF04563 RNA polymerase beta subunit FJR48_RS10045 PF10385 RNA polymerase beta subunit external 1 domain FJR48_RS10050 PF00542 Ribosomal protein L7/L12 C-terminal domain FJR48_RS10050 PF16320 Ribosomal protein L7/L12 dimerisation domain FJR48_RS10055 PF00466 Ribosomal protein L10 FJR48_RS10060 PF00687 Ribosomal protein L1p/L10e family FJR48_RS10065 PF03946 Ribosomal protein L11, N-terminal domain FJR48_RS10065 PF00298 Ribosomal protein L11, RNA binding domain FJR48_RS10070 PF02357 Transcription termination factor nusG FJR48_RS10085 PF00471 Ribosomal protein L33 FJR48_RS10090 PF03144 Elongation factor Tu domain 2 FJR48_RS10090 PF00009 Elongation factor Tu GTP binding domain FJR48_RS10090 PF03143 Elongation factor Tu C-terminal domain FJR48_RS10115 PF03883 Peroxide stress protein YaaA FJR48_RS10130 PF00588 SpoU rRNA Methylase family FJR48_RS10130 PF08032 RNA 2'-O ribose methyltransferase substrate binding FJR48_RS10140 PF00106 short chain dehydrogenase FJR48_RS10145 PF00085 Thioredoxin FJR48_RS10165 PF00563 EAL domain FJR48_RS10165 PF00990 Diguanylate cyclase, GGDEF domain FJR48_RS10165 PF03707 Bacterial signalling protein N terminal repeat FJR48_RS10180 PF16591 Helical bimodular sensor domain FJR48_RS10180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FJR48_RS10180 PF00672 HAMP domain FJR48_RS10230 PF00528 Binding-protein-dependent transport system inner membrane component FJR48_RS10235 PF08402 TOBE domain FJR48_RS10235 PF00005 ABC transporter FJR48_RS10245 PF13520 Amino acid permease FJR48_RS10250 PF14490 Helix-hairpin-helix containing domain FJR48_RS10250 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain FJR48_RS10250 PF13538 UvrD-like helicase C-terminal domain FJR48_RS10255 PF00581 Rhodanese-like domain FJR48_RS10260 PF02091 Glycyl-tRNA synthetase alpha subunit FJR48_RS10285 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FJR48_RS10285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJR48_RS10285 PF01627 Hpt domain FJR48_RS10285 PF00672 HAMP domain FJR48_RS10285 PF00512 His Kinase A (phospho-acceptor) domain FJR48_RS10285 PF00072 Response regulator receiver domain FJR48_RS10290 PF11849 Domain of unknown function (DUF3369) FJR48_RS10310 PF00731 AIR carboxylase FJR48_RS10315 PF01136 Peptidase family U32 FJR48_RS10325 PF02811 PHP domain FJR48_RS10340 PF00085 Thioredoxin FJR48_RS10350 PF07992 Pyridine nucleotide-disulphide oxidoreductase FJR48_RS10360 PF01113 Dihydrodipicolinate reductase, N-terminus FJR48_RS10360 PF05173 Dihydrodipicolinate reductase, C-terminus FJR48_RS10370 PF00361 Proton-conducting membrane transporter FJR48_RS10375 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus FJR48_RS10375 PF00361 Proton-conducting membrane transporter FJR48_RS10380 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FJR48_RS10380 PF00361 Proton-conducting membrane transporter FJR48_RS10385 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FJR48_RS10390 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 FJR48_RS10395 PF12838 4Fe-4S dicluster domain FJR48_RS10400 PF00146 NADH dehydrogenase FJR48_RS10405 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal FJR48_RS10405 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region FJR48_RS10405 PF00384 Molybdopterin oxidoreductase FJR48_RS10410 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region FJR48_RS10410 PF12838 4Fe-4S dicluster domain FJR48_RS10410 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FJR48_RS10410 PF00384 Molybdopterin oxidoreductase FJR48_RS10410 PF01568 Molydopterin dinucleotide binding domain FJR48_RS10415 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region FJR48_RS10415 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FJR48_RS10415 PF07992 Pyridine nucleotide-disulphide oxidoreductase FJR48_RS10425 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit FJR48_RS10430 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit FJR48_RS10435 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FJR48_RS10440 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 FJR48_RS10445 PF17758 Proteasomal ATPase OB N-terminal domain FJR48_RS10445 PF16450 Proteasomal ATPase OB C-terminal domain FJR48_RS10445 PF00004 ATPase family associated with various cellular activities (AAA) FJR48_RS10455 PF01261 Xylose isomerase-like TIM barrel FJR48_RS10465 PF00817 impB/mucB/samB family FJR48_RS10465 PF11799 impB/mucB/samB family C-terminal domain FJR48_RS10465 PF11798 IMS family HHH motif FJR48_RS10475 PF01556 DnaJ C terminal domain FJR48_RS10475 PF00684 DnaJ central domain FJR48_RS10475 PF00226 DnaJ domain FJR48_RS10480 PF13537 Glutamine amidotransferase domain FJR48_RS10480 PF00156 Phosphoribosyl transferase domain FJR48_RS10485 PF04055 Radical SAM superfamily FJR48_RS10485 PF16199 Radical_SAM C-terminal domain FJR48_RS10490 PF00072 Response regulator receiver domain FJR48_RS10490 PF00486 Transcriptional regulatory protein, C terminal FJR48_RS10495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJR48_RS10515 PF17131 Outer membrane lipoprotein-sorting protein FJR48_RS10540 PF01502 Phosphoribosyl-AMP cyclohydrolase FJR48_RS10540 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase FJR48_RS10545 PF01145 SPFH domain / Band 7 family FJR48_RS10550 PF01063 Amino-transferase class IV FJR48_RS10565 PF01618 MotA/TolQ/ExbB proton channel family FJR48_RS10575 PF02472 Biopolymer transport protein ExbD/TolR FJR48_RS10595 PF00486 Transcriptional regulatory protein, C terminal FJR48_RS10595 PF00072 Response regulator receiver domain FJR48_RS10600 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain FJR48_RS10600 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase FJR48_RS10605 PF12792 CSS motif domain associated with EAL FJR48_RS10605 PF00563 EAL domain FJR48_RS10625 PF02028 BCCT, betaine/carnitine/choline family transporter FJR48_RS10635 PF12833 Helix-turn-helix domain FJR48_RS10635 PF06719 AraC-type transcriptional regulator N-terminus FJR48_RS10645 PF02678 Pirin FJR48_RS10645 PF05726 Pirin C-terminal cupin domain FJR48_RS10660 PF18541 RuvC endonuclease subdomain 3 FJR48_RS10660 PF13395 HNH endonuclease FJR48_RS10665 PF01867 CRISPR associated protein Cas1 FJR48_RS10670 PF09827 CRISPR associated protein Cas2 FJR48_RS10675 PF00107 Zinc-binding dehydrogenase FJR48_RS10675 PF08240 Alcohol dehydrogenase GroES-like domain FJR48_RS10680 PF00999 Sodium/hydrogen exchanger family FJR48_RS10680 PF02254 TrkA-N domain FJR48_RS10690 PF12849 PBP superfamily domain FJR48_RS10695 PF00528 Binding-protein-dependent transport system inner membrane component FJR48_RS10700 PF00528 Binding-protein-dependent transport system inner membrane component FJR48_RS10705 PF00005 ABC transporter FJR48_RS10715 PF00990 Diguanylate cyclase, GGDEF domain FJR48_RS10715 PF08448 PAS fold FJR48_RS10725 PF03951 Glutamine synthetase, beta-Grasp domain FJR48_RS10725 PF00120 Glutamine synthetase, catalytic domain FJR48_RS10730 PF00072 Response regulator receiver domain FJR48_RS10730 PF09308 LuxQ, periplasmic FJR48_RS10730 PF00512 His Kinase A (phospho-acceptor) domain FJR48_RS10730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJR48_RS10735 PF08502 LeuA allosteric (dimerisation) domain FJR48_RS10735 PF00682 HMGL-like FJR48_RS10740 PF00072 Response regulator receiver domain FJR48_RS10740 PF00486 Transcriptional regulatory protein, C terminal FJR48_RS10745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJR48_RS10810 PF00005 ABC transporter FJR48_RS10825 PF02801 Beta-ketoacyl synthase, C-terminal domain FJR48_RS10825 PF00109 Beta-ketoacyl synthase, N-terminal domain FJR48_RS10835 PF00109 Beta-ketoacyl synthase, N-terminal domain FJR48_RS10835 PF02801 Beta-ketoacyl synthase, C-terminal domain FJR48_RS10845 PF00221 Aromatic amino acid lyase FJR48_RS10855 PF00109 Beta-ketoacyl synthase, N-terminal domain FJR48_RS10855 PF02801 Beta-ketoacyl synthase, C-terminal domain FJR48_RS10860 PF00550 Phosphopantetheine attachment site FJR48_RS10870 PF00501 AMP-binding enzyme FJR48_RS10870 PF01553 Acyltransferase FJR48_RS10890 PF00550 Phosphopantetheine attachment site FJR48_RS10900 PF12146 Serine aminopeptidase, S33 FJR48_RS10905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJR48_RS10905 PF08448 PAS fold FJR48_RS10905 PF08447 PAS fold FJR48_RS10910 PF00072 Response regulator receiver domain FJR48_RS10910 PF00196 Bacterial regulatory proteins, luxR family FJR48_RS10915 PF00905 Penicillin binding protein transpeptidase domain FJR48_RS10915 PF00912 Transglycosylase FJR48_RS10920 PF00005 ABC transporter FJR48_RS10920 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FJR48_RS10925 PF02086 D12 class N6 adenine-specific DNA methyltransferase FJR48_RS10935 PF14207 DpnD/PcfM-like protein FJR48_RS10940 PF06044 Dam-replacing family FJR48_RS10940 PF17726 Dam-replacing HTH domain FJR48_RS10945 PF02086 D12 class N6 adenine-specific DNA methyltransferase FJR48_RS10950 PF00155 Aminotransferase class I and II FJR48_RS10955 PF00990 Diguanylate cyclase, GGDEF domain FJR48_RS10955 PF00072 Response regulator receiver domain FJR48_RS10960 PF01590 GAF domain FJR48_RS10960 PF00360 Phytochrome region FJR48_RS10960 PF00563 EAL domain FJR48_RS10960 PF00990 Diguanylate cyclase, GGDEF domain FJR48_RS10970 PF00313 'Cold-shock' DNA-binding domain FJR48_RS10975 PF02545 Maf-like protein FJR48_RS10980 PF02810 SEC-C motif FJR48_RS10985 PF00072 Response regulator receiver domain FJR48_RS10985 PF00512 His Kinase A (phospho-acceptor) domain FJR48_RS10985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJR48_RS10985 PF09308 LuxQ, periplasmic FJR48_RS10995 PF02272 DHHA1 domain FJR48_RS10995 PF01411 tRNA synthetases class II (A) FJR48_RS10995 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FJR48_RS11010 PF01966 HD domain FJR48_RS11010 PF11871 Domain of unknown function (DUF3391) FJR48_RS11015 PF00171 Aldehyde dehydrogenase family FJR48_RS11030 PF02021 Uncharacterised protein family UPF0102 FJR48_RS11035 PF01568 Molydopterin dinucleotide binding domain FJR48_RS11035 PF00384 Molybdopterin oxidoreductase FJR48_RS11035 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FJR48_RS11040 PF03447 Homoserine dehydrogenase, NAD binding domain FJR48_RS11040 PF01842 ACT domain FJR48_RS11040 PF00742 Homoserine dehydrogenase FJR48_RS11045 PF00155 Aminotransferase class I and II FJR48_RS11060 PF08032 RNA 2'-O ribose methyltransferase substrate binding FJR48_RS11060 PF00588 SpoU rRNA Methylase family FJR48_RS11065 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FJR48_RS11070 PF01197 Ribosomal protein L31 FJR48_RS11075 PF04452 RNA methyltransferase FJR48_RS11085 PF03454 MoeA C-terminal region (domain IV) FJR48_RS11085 PF00994 Probable molybdopterin binding domain FJR48_RS11085 PF03453 MoeA N-terminal region (domain I and II) FJR48_RS11090 PF01242 6-pyruvoyl tetrahydropterin synthase FJR48_RS11100 PF04055 Radical SAM superfamily FJR48_RS11100 PF06463 Molybdenum Cofactor Synthesis C FJR48_RS11130 PF00033 Cytochrome b/b6/petB FJR48_RS11130 PF00032 Cytochrome b(C-terminal)/b6/petD FJR48_RS11135 PF00355 Rieske [2Fe-2S] domain FJR48_RS11135 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal FJR48_RS11145 PF17200 Single Cache domain 2 FJR48_RS11145 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FJR48_RS11145 PF00672 HAMP domain FJR48_RS11150 PF01134 Glucose inhibited division protein A FJR48_RS11150 PF13932 GidA associated domain FJR48_RS11165 PF00677 Lumazine binding domain FJR48_RS11170 PF08448 PAS fold FJR48_RS11170 PF00990 Diguanylate cyclase, GGDEF domain FJR48_RS11175 PF00072 Response regulator receiver domain FJR48_RS11200 PF02664 S-Ribosylhomocysteinase (LuxS) FJR48_RS11205 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FJR48_RS11210 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg FJR48_RS11210 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II FJR48_RS11220 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase FJR48_RS11225 PF13419 Haloacid dehalogenase-like hydrolase FJR48_RS11230 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FJR48_RS11240 PF00380 Ribosomal protein S9/S16 FJR48_RS11245 PF00572 Ribosomal protein L13 FJR48_RS11250 PF01810 LysE type translocator FJR48_RS11255 PF00580 UvrD/REP helicase N-terminal domain FJR48_RS11255 PF12705 PD-(D/E)XK nuclease superfamily FJR48_RS11255 PF13361 UvrD-like helicase C-terminal domain FJR48_RS11280 PF01266 FAD dependent oxidoreductase FJR48_RS11280 PF05430 S-adenosyl-L-methionine-dependent methyltransferase FJR48_RS11300 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FJR48_RS11300 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP FJR48_RS11315 PF00115 Cytochrome C and Quinol oxidase polypeptide I FJR48_RS11320 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain FJR48_RS11320 PF00117 Glutamine amidotransferase class-I FJR48_RS11335 PF08448 PAS fold FJR48_RS11335 PF00990 Diguanylate cyclase, GGDEF domain FJR48_RS11350 PF00709 Adenylosuccinate synthetase FJR48_RS11355 PF13393 Histidyl-tRNA synthetase FJR48_RS11360 PF00266 Aminotransferase class-V FJR48_RS11365 PF02673 Bacitracin resistance protein BacA FJR48_RS11370 PF01725 Ham1 family FJR48_RS11375 PF07690 Major Facilitator Superfamily FJR48_RS11385 PF05198 Translation initiation factor IF-3, N-terminal domain FJR48_RS11385 PF00707 Translation initiation factor IF-3, C-terminal domain FJR48_RS11390 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FJR48_RS11390 PF03129 Anticodon binding domain FJR48_RS11390 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FJR48_RS11415 PF00920 Dehydratase family FJR48_RS11450 PF05973 Phage derived protein Gp49-like (DUF891) FJR48_RS11455 PF02661 Fic/DOC family FJR48_RS11465 PF03881 Fructosamine kinase FJR48_RS11475 PF00563 EAL domain FJR48_RS11475 PF00990 Diguanylate cyclase, GGDEF domain FJR48_RS11475 PF03707 Bacterial signalling protein N terminal repeat FJR48_RS11480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJR48_RS11480 PF00512 His Kinase A (phospho-acceptor) domain FJR48_RS11480 PF09308 LuxQ, periplasmic FJR48_RS11480 PF00072 Response regulator receiver domain FJR48_RS11485 PF00005 ABC transporter FJR48_RS11485 PF00664 ABC transporter transmembrane region FJR48_RS11490 PF01226 Formate/nitrite transporter FJR48_RS11505 PF00194 Eukaryotic-type carbonic anhydrase FJR48_RS11520 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FJR48_RS11520 PF01872 RibD C-terminal domain FJR48_RS11530 PF00563 EAL domain FJR48_RS11530 PF00990 Diguanylate cyclase, GGDEF domain FJR48_RS11530 PF03707 Bacterial signalling protein N terminal repeat FJR48_RS11535 PF00749 tRNA synthetases class I (E and Q), catalytic domain FJR48_RS11560 PF00873 AcrB/AcrD/AcrF family FJR48_RS11570 PF00732 GMC oxidoreductase FJR48_RS11570 PF05199 GMC oxidoreductase FJR48_RS11580 PF07681 DoxX FJR48_RS11590 PF00486 Transcriptional regulatory protein, C terminal FJR48_RS11590 PF00072 Response regulator receiver domain FJR48_RS11595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJR48_RS11600 PF03880 DbpA RNA binding domain FJR48_RS11600 PF00270 DEAD/DEAH box helicase FJR48_RS11600 PF00271 Helicase conserved C-terminal domain FJR48_RS11605 PF00588 SpoU rRNA Methylase family FJR48_RS11605 PF08032 RNA 2'-O ribose methyltransferase substrate binding FJR48_RS11635 PF07556 Protein of unknown function (DUF1538) FJR48_RS11645 PF04461 Protein of unknown function (DUF520) FJR48_RS11650 PF13085 2Fe-2S iron-sulfur cluster binding domain FJR48_RS11650 PF13183 4Fe-4S dicluster domain FJR48_RS11655 PF00890 FAD binding domain FJR48_RS11655 PF02910 Fumarate reductase flavoprotein C-term FJR48_RS11670 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FJR48_RS11670 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FJR48_RS11675 PF02222 ATP-grasp domain FJR48_RS11685 PF07559 Flagellar basal body protein FlaE FJR48_RS11685 PF07196 Flagellin hook IN motif FJR48_RS11685 PF00460 Flagella basal body rod protein FJR48_RS11685 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FJR48_RS11690 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FJR48_RS11690 PF07559 Flagellar basal body protein FlaE FJR48_RS11690 PF00460 Flagella basal body rod protein FJR48_RS11695 PF03963 Flagellar hook capping protein - N-terminal region FJR48_RS11725 PF01807 CHC2 zinc finger FJR48_RS11725 PF16730 DnaG-primase C-terminal, helicase-binding domain FJR48_RS11725 PF13662 Toprim domain FJR48_RS11725 PF08275 DNA primase catalytic core, N-terminal domain FJR48_RS11730 PF01165 Ribosomal protein S21 FJR48_RS11745 PF02254 TrkA-N domain FJR48_RS11745 PF00999 Sodium/hydrogen exchanger family FJR48_RS11750 PF13286 Phosphohydrolase-associated domain FJR48_RS11750 PF01966 HD domain FJR48_RS11765 PF00072 Response regulator receiver domain FJR48_RS11765 PF00990 Diguanylate cyclase, GGDEF domain FJR48_RS11785 PF04717 Type VI secretion system, phage-baseplate injector FJR48_RS11805 PF00182 Chitinase class I FJR48_RS11820 PF00795 Carbon-nitrogen hydrolase FJR48_RS11845 PF00268 Ribonucleotide reductase, small chain FJR48_RS11855 PF01625 Peptide methionine sulfoxide reductase FJR48_RS11855 PF01641 SelR domain FJR48_RS11860 PF00009 Elongation factor Tu GTP binding domain FJR48_RS11860 PF00679 Elongation factor G C-terminus FJR48_RS11860 PF03144 Elongation factor Tu domain 2 FJR48_RS11865 PF01743 Poly A polymerase head domain FJR48_RS11865 PF12627 Probable RNA and SrmB- binding site of polymerase A FJR48_RS11865 PF01966 HD domain FJR48_RS11875 PF14489 QueF-like protein FJR48_RS11880 PF00990 Diguanylate cyclase, GGDEF domain FJR48_RS11880 PF08447 PAS fold FJR48_RS11880 PF08448 PAS fold FJR48_RS11880 PF00563 EAL domain FJR48_RS11885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJR48_RS11885 PF00986 DNA gyrase B subunit, carboxyl terminus FJR48_RS11885 PF00204 DNA gyrase B FJR48_RS11885 PF01751 Toprim domain FJR48_RS11890 PF02768 DNA polymerase III beta subunit, C-terminal domain FJR48_RS11890 PF00712 DNA polymerase III beta subunit, N-terminal domain FJR48_RS11890 PF02767 DNA polymerase III beta subunit, central domain FJR48_RS11900 PF04055 Radical SAM superfamily FJR48_RS11900 PF00919 Uncharacterized protein family UPF0004 FJR48_RS11900 PF01938 TRAM domain FJR48_RS11905 PF04028 Domain of unknown function (DUF374) FJR48_RS11940 PF01171 PP-loop family FJR48_RS11945 PF00919 Uncharacterized protein family UPF0004 FJR48_RS11945 PF18693 TRAM domain FJR48_RS11945 PF04055 Radical SAM superfamily FJR48_RS11965 PF01293 Phosphoenolpyruvate carboxykinase FJR48_RS11975 PF17757 UvrB interaction domain FJR48_RS11975 PF12344 Ultra-violet resistance protein B FJR48_RS11975 PF00271 Helicase conserved C-terminal domain FJR48_RS11975 PF04851 Type III restriction enzyme, res subunit FJR48_RS11975 PF02151 UvrB/uvrC motif FJR48_RS12010 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FJR48_RS12040 PF00042 Globin FJR48_RS12050 PF12344 Ultra-violet resistance protein B FJR48_RS12050 PF02151 UvrB/uvrC motif FJR48_RS12050 PF04851 Type III restriction enzyme, res subunit FJR48_RS12050 PF00271 Helicase conserved C-terminal domain FJR48_RS12050 PF17757 UvrB interaction domain FJR48_RS12060 PF01293 Phosphoenolpyruvate carboxykinase FJR48_RS12080 PF00919 Uncharacterized protein family UPF0004 FJR48_RS12080 PF04055 Radical SAM superfamily FJR48_RS12080 PF18693 TRAM domain FJR48_RS12105 PF02899 Phage integrase, N-terminal SAM-like domain FJR48_RS12105 PF00589 Phage integrase family FJR48_RS12115 PF04028 Domain of unknown function (DUF374) FJR48_RS12120 PF04055 Radical SAM superfamily FJR48_RS12120 PF01938 TRAM domain FJR48_RS12120 PF00919 Uncharacterized protein family UPF0004