SUTH_RS00005	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS00005	SM00760	Bacterial dnaA protein helix-turn-helix domain
SUTH_RS00010	SM00480	DNA polymerase III beta subunit
SUTH_RS00015	SM00387	Histidine kinase-like ATPases
SUTH_RS00015	SM00433	TopoisomeraseII
SUTH_RS00030	SM00487	DEAD-like helicases superfamily
SUTH_RS00030	SM00490	helicase superfamily c-terminal domain
SUTH_RS00120	SM00925	MltA specific insert domain
SUTH_RS00220	SM00100	Cyclic nucleotide-monophosphate binding domain
SUTH_RS00235	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS00235	SM00448	cheY-homologous receiver domain
SUTH_RS00240	SM00387	Histidine kinase-like ATPases
SUTH_RS00240	SM00388	His Kinase A (phosphoacceptor) domain
SUTH_RS00250	SM01230	SUTH_RS00250
SUTH_RS00260	SM00450	Rhodanese Homology Domain
SUTH_RS00285	SM00155	Phospholipase D. Active site motifs.
SUTH_RS00295	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS00310	SM00062	Bacterial periplasmic substrate-binding proteins
SUTH_RS00315	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS00365	SM00342	helix_turn_helix, arabinose operon control protein
SUTH_RS00390	SM00829	Enoylreductase
SUTH_RS00420	SM00460	Transglutaminase/protease-like homologues
SUTH_RS00455	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS00460	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS00545	SM00487	DEAD-like helicases superfamily
SUTH_RS00545	SM00490	helicase superfamily c-terminal domain
SUTH_RS00550	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SUTH_RS00550	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SUTH_RS00560	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
SUTH_RS00560	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
SUTH_RS00560	SM00493	SUTH_RS00560
SUTH_RS00575	SM00257	Lysin motif
SUTH_RS00625	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SUTH_RS00625	SM00387	Histidine kinase-like ATPases
SUTH_RS00625	SM00388	His Kinase A (phosphoacceptor) domain
SUTH_RS00630	SM00448	cheY-homologous receiver domain
SUTH_RS00650	SM00487	DEAD-like helicases superfamily
SUTH_RS00685	SM00831	Cation transporter/ATPase, N-terminus
SUTH_RS00695	SM00644	SUTH_RS00695
SUTH_RS00705	SM00474	3'-5' exonuclease
SUTH_RS00830	SM00903	Flavin reductase like domain
SUTH_RS00850	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SUTH_RS00855	SM00883	Chaperonin 10 Kd subunit
SUTH_RS00870	SM00448	cheY-homologous receiver domain
SUTH_RS00870	SM00862	Transcriptional regulatory protein, C terminal
SUTH_RS00875	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SUTH_RS00875	SM00387	Histidine kinase-like ATPases
SUTH_RS00875	SM00388	His Kinase A (phosphoacceptor) domain
SUTH_RS00900	SM00220	Serine/Threonine protein kinases, catalytic domain
SUTH_RS00960	SM00316	Ribosomal protein S1-like RNA-binding domain
SUTH_RS01005	SM00460	Transglutaminase/protease-like homologues
SUTH_RS01055	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
SUTH_RS01060	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS01060	SM00448	cheY-homologous receiver domain
SUTH_RS01065	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SUTH_RS01065	SM00387	Histidine kinase-like ATPases
SUTH_RS01065	SM00388	His Kinase A (phosphoacceptor) domain
SUTH_RS01135	SM00845	GatB domain
SUTH_RS01180	SM00936	Penicillin-binding protein 5, C-terminal domain 
SUTH_RS01200	SM00729	Elongator protein 3, MiaB family, Radical SAM
SUTH_RS01205	SM00563	Phosphate acyltransferases
SUTH_RS01210	SM00530	Helix-turn-helix XRE-family like proteins 
SUTH_RS01220	SM00320	WD40 repeats
SUTH_RS01225	SM00100	Cyclic nucleotide-monophosphate binding domain
SUTH_RS01275	SM00732	Likely ribonuclease with RNase H fold.
SUTH_RS01295	SM00487	DEAD-like helicases superfamily
SUTH_RS01295	SM00490	helicase superfamily c-terminal domain
SUTH_RS01300	SM01152	SUTH_RS01300
SUTH_RS01320	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS01330	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SUTH_RS01340	SM00981	SUTH_RS01340
SUTH_RS01360	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS01365	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS01400	SM00448	cheY-homologous receiver domain
SUTH_RS01415	SM00450	Rhodanese Homology Domain
SUTH_RS01470	SM00836	DALR anticodon binding domain
SUTH_RS01470	SM01016	Arginyl tRNA synthetase N terminal dom
SUTH_RS01510	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS01550	SM00267	diguanylate cyclase
SUTH_RS01560	SM00729	Elongator protein 3, MiaB family, Radical SAM
SUTH_RS01575	SM00331	Sigma factor PP2C-like phosphatases
SUTH_RS01575	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
SUTH_RS01580	SM00220	Serine/Threonine protein kinases, catalytic domain
SUTH_RS01595	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SUTH_RS01595	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SUTH_RS01600	SM00260	Two component signalling adaptor domain
SUTH_RS01630	SM00563	Phosphate acyltransferases
SUTH_RS01635	SM00937	SUTH_RS01635
SUTH_RS01660	SM01004	Delta-aminolevulinic acid dehydratase
SUTH_RS01705	SM00834	Putative regulatory protein
SUTH_RS01720	SM01091	Transporter associated domain
SUTH_RS01730	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS01730	SM00962	SRP54-type protein, GTPase domain
SUTH_RS01730	SM00963	SRP54-type protein, helical bundle domain
SUTH_RS01790	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS01840	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
SUTH_RS01900	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS01910	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SUTH_RS01915	SM00226	Low molecular weight phosphatase family
SUTH_RS01955	SM00450	Rhodanese Homology Domain
SUTH_RS02060	SM00450	Rhodanese Homology Domain
SUTH_RS02100	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
SUTH_RS02120	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SUTH_RS02120	SM00387	Histidine kinase-like ATPases
SUTH_RS02120	SM00388	His Kinase A (phosphoacceptor) domain
SUTH_RS02125	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS02125	SM00448	cheY-homologous receiver domain
SUTH_RS02140	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS02140	SM00448	cheY-homologous receiver domain
SUTH_RS02145	SM00387	Histidine kinase-like ATPases
SUTH_RS02145	SM00388	His Kinase A (phosphoacceptor) domain
SUTH_RS02155	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
SUTH_RS02190	SM00387	Histidine kinase-like ATPases
SUTH_RS02190	SM00388	His Kinase A (phosphoacceptor) domain
SUTH_RS02195	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS02195	SM00448	cheY-homologous receiver domain
SUTH_RS02225	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SUTH_RS02225	SM00954	Region found in RelA / SpoT proteins
SUTH_RS02230	SM01409	SUTH_RS02230
SUTH_RS02235	SM00072	Guanylate kinase homologues.
SUTH_RS02275	SM00749	bacterial OsmY and nodulation domain
SUTH_RS02285	SM00966	SpoVT / AbrB like domain 
SUTH_RS02325	SM00849	Metallo-beta-lactamase superfamily
SUTH_RS02430	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SUTH_RS02430	SM00387	Histidine kinase-like ATPases
SUTH_RS02430	SM00388	His Kinase A (phosphoacceptor) domain
SUTH_RS02435	SM00448	cheY-homologous receiver domain
SUTH_RS02435	SM00862	Transcriptional regulatory protein, C terminal
SUTH_RS02450	SM00054	EF-hand, calcium binding motif
SUTH_RS02460	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS02480	SM00347	helix_turn_helix multiple antibiotic resistance protein
SUTH_RS02590	SM00938	Nitrogen regulatory protein P-II
SUTH_RS02600	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SUTH_RS02615	SM00849	Metallo-beta-lactamase superfamily
SUTH_RS02620	SM00422	helix_turn_helix, mercury resistance
SUTH_RS02645	SM00947	Carbonic anhydrase
SUTH_RS02695	SM00878	Biotin carboxylase C-terminal domain
SUTH_RS02710	SM00849	Metallo-beta-lactamase superfamily
SUTH_RS02735	SM00464	Found in ATP-dependent protease La (LON)
SUTH_RS02740	SM00478	endonuclease III
SUTH_RS02740	SM00525	SUTH_RS02740
SUTH_RS02750	SM00903	Flavin reductase like domain
SUTH_RS02770	SM00028	Tetratricopeptide repeats
SUTH_RS02795	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
SUTH_RS02840	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS02840	SM01086	C-terminal, D2-small domain, of ClpB protein
SUTH_RS02895	SM01219	SUTH_RS02895
SUTH_RS02905	SM00842	Cell division protein FtsA
SUTH_RS02940	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SUTH_RS02965	SM00729	Elongator protein 3, MiaB family, Radical SAM
SUTH_RS02975	SM00838	Elongation factor G C-terminus
SUTH_RS02975	SM00889	Elongation factor G, domain IV
SUTH_RS02980	SM00746	metallochaperone-like domain
SUTH_RS03030	SM00448	cheY-homologous receiver domain
SUTH_RS03030	SM00862	Transcriptional regulatory protein, C terminal
SUTH_RS03035	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SUTH_RS03035	SM00387	Histidine kinase-like ATPases
SUTH_RS03035	SM00388	His Kinase A (phosphoacceptor) domain
SUTH_RS03055	SM00387	Histidine kinase-like ATPases
SUTH_RS03060	SM00421	helix_turn_helix, Lux Regulon
SUTH_RS03060	SM00448	cheY-homologous receiver domain
SUTH_RS03080	SM00342	helix_turn_helix, arabinose operon control protein
SUTH_RS03105	SM00100	Cyclic nucleotide-monophosphate binding domain
SUTH_RS03115	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS03135	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS03160	SM00421	helix_turn_helix, Lux Regulon
SUTH_RS03160	SM00448	cheY-homologous receiver domain
SUTH_RS03215	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
SUTH_RS03215	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
SUTH_RS03220	SM00649	Ribosomal protein L11/L12
SUTH_RS03245	SM00663	RNA polymerase I subunit A N-terminus
SUTH_RS03260	SM00838	Elongation factor G C-terminus
SUTH_RS03260	SM00889	Elongation factor G, domain IV
SUTH_RS03270	SM01403	SUTH_RS03270
SUTH_RS03290	SM01382	SUTH_RS03290
SUTH_RS03290	SM01383	SUTH_RS03290
SUTH_RS03305	SM00322	K homology RNA-binding domain
SUTH_RS03325	SM01374	SUTH_RS03325
SUTH_RS03330	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
SUTH_RS03380	SM00316	Ribosomal protein S1-like RNA-binding domain
SUTH_RS03400	SM00363	S4 RNA-binding domain
SUTH_RS03400	SM01390	SUTH_RS03400
SUTH_RS03405	SM00662	RNA polymerases D
SUTH_RS03475	SM00052	Putative diguanylate phosphodiesterase
SUTH_RS03475	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SUTH_RS03475	SM00091	PAS domain
SUTH_RS03475	SM00267	diguanylate cyclase
SUTH_RS03495	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SUTH_RS03495	SM00895	SUTH_RS03495
SUTH_RS03500	SM00855	Phosphoglycerate mutase family
SUTH_RS03535	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
SUTH_RS03535	SM00245	tail specific protease
SUTH_RS03545	SM00855	Phosphoglycerate mutase family
SUTH_RS03550	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SUTH_RS03555	SM00450	Rhodanese Homology Domain
SUTH_RS03585	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS03635	SM00965	Secretin and TonB N terminus short domain
SUTH_RS03645	SM00028	Tetratricopeptide repeats
SUTH_RS03660	SM00729	Elongator protein 3, MiaB family, Radical SAM
SUTH_RS03660	SM00876	Biotin and Thiamin Synthesis associated domain
SUTH_RS03705	SM01034	Sensors of blue-light using FAD
SUTH_RS03775	SM00327	von Willebrand factor (vWF) type A domain
SUTH_RS03795	SM00861	Transketolase, pyrimidine binding domain
SUTH_RS03800	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
SUTH_RS03855	SM00419	helix_turn_helix, cAMP Regulatory protein
SUTH_RS03875	SM00650	Ribosomal RNA adenine dimethylases
SUTH_RS03910	SM01011	Aminopeptidase P, N-terminal domain
SUTH_RS03930	SM00798	AICARFT/IMPCHase bienzyme
SUTH_RS03930	SM00851	MGS-like domain
SUTH_RS03935	SM01209	SUTH_RS03935
SUTH_RS03935	SM01210	SUTH_RS03935
SUTH_RS03990	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
SUTH_RS04005	SM00530	Helix-turn-helix XRE-family like proteins 
SUTH_RS04065	SM00411	bacterial (prokaryotic) histone like domain
SUTH_RS04075	SM00450	Rhodanese Homology Domain
SUTH_RS04090	SM00646	SUTH_RS04090
SUTH_RS04095	SM00904	Riboflavin kinase
SUTH_RS04230	SM00100	Cyclic nucleotide-monophosphate binding domain
SUTH_RS04230	SM00419	helix_turn_helix, cAMP Regulatory protein
SUTH_RS04245	SM00100	Cyclic nucleotide-monophosphate binding domain
SUTH_RS04245	SM00419	helix_turn_helix, cAMP Regulatory protein
SUTH_RS04250	SM00729	Elongator protein 3, MiaB family, Radical SAM
SUTH_RS04260	SM00450	Rhodanese Homology Domain
SUTH_RS04335	SM00938	Nitrogen regulatory protein P-II
SUTH_RS04340	SM00463	Small MutS-related domain
SUTH_RS04370	SM00843	SUTH_RS04370
SUTH_RS04380	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS04390	SM00062	Bacterial periplasmic substrate-binding proteins
SUTH_RS04400	SM00729	Elongator protein 3, MiaB family, Radical SAM
SUTH_RS04405	SM00507	HNH nucleases
SUTH_RS04440	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SUTH_RS04445	SM00448	cheY-homologous receiver domain
SUTH_RS04450	SM00073	Histidine Phosphotransfer domain
SUTH_RS04450	SM00260	Two component signalling adaptor domain
SUTH_RS04450	SM00387	Histidine kinase-like ATPases
SUTH_RS04450	SM01231	SUTH_RS04450
SUTH_RS04455	SM00260	Two component signalling adaptor domain
SUTH_RS04460	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SUTH_RS04460	SM00091	PAS domain
SUTH_RS04460	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SUTH_RS04465	SM00138	Methyltransferase, chemotaxis proteins 
SUTH_RS04475	SM00448	cheY-homologous receiver domain
SUTH_RS04485	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SUTH_RS04490	SM00260	Two component signalling adaptor domain
SUTH_RS04490	SM00448	cheY-homologous receiver domain
SUTH_RS04495	SM00260	Two component signalling adaptor domain
SUTH_RS04495	SM00448	cheY-homologous receiver domain
SUTH_RS04500	SM00448	cheY-homologous receiver domain
SUTH_RS04510	SM00073	Histidine Phosphotransfer domain
SUTH_RS04510	SM00260	Two component signalling adaptor domain
SUTH_RS04510	SM00387	Histidine kinase-like ATPases
SUTH_RS04510	SM01231	SUTH_RS04510
SUTH_RS04525	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS04525	SM00962	SRP54-type protein, GTPase domain
SUTH_RS04560	SM00858	SUTH_RS04560
SUTH_RS04610	SM00047	Lysozyme subfamily 2
SUTH_RS04675	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS04695	SM00387	Histidine kinase-like ATPases
SUTH_RS04695	SM00388	His Kinase A (phosphoacceptor) domain
SUTH_RS04700	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS04700	SM00448	cheY-homologous receiver domain
SUTH_RS04720	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS04725	SM00028	Tetratricopeptide repeats
SUTH_RS04765	SM00671	Sel1-like repeats.
SUTH_RS04860	SM00327	von Willebrand factor (vWF) type A domain
SUTH_RS04870	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SUTH_RS04870	SM00450	Rhodanese Homology Domain
SUTH_RS04925	SM00347	helix_turn_helix multiple antibiotic resistance protein
SUTH_RS04960	SM00822	SUTH_RS04960
SUTH_RS04985	SM00448	cheY-homologous receiver domain
SUTH_RS04985	SM01012	SUTH_RS04985
SUTH_RS05000	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS05025	SM00100	Cyclic nucleotide-monophosphate binding domain
SUTH_RS05025	SM00220	Serine/Threonine protein kinases, catalytic domain
SUTH_RS05030	SM00387	Histidine kinase-like ATPases
SUTH_RS05095	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS05125	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS05135	SM00478	endonuclease III
SUTH_RS05145	SM00900	SUTH_RS05145
SUTH_RS05210	SM00421	helix_turn_helix, Lux Regulon
SUTH_RS05210	SM00448	cheY-homologous receiver domain
SUTH_RS05215	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SUTH_RS05215	SM00091	PAS domain
SUTH_RS05215	SM00387	Histidine kinase-like ATPases
SUTH_RS05215	SM00388	His Kinase A (phosphoacceptor) domain
SUTH_RS05235	SM00562	SUTH_RS05235
SUTH_RS05245	SM00028	Tetratricopeptide repeats
SUTH_RS05270	SM00564	beta-propeller repeat
SUTH_RS05275	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS05290	SM00244	prohibitin homologues
SUTH_RS05295	SM00244	prohibitin homologues
SUTH_RS05310	SM00788	Adenylosuccinate synthetase
SUTH_RS05320	SM00316	Ribosomal protein S1-like RNA-binding domain
SUTH_RS05320	SM00357	Cold shock protein domain
SUTH_RS05320	SM00955	SUTH_RS05320
SUTH_RS05395	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS05395	SM01086	C-terminal, D2-small domain, of ClpB protein
SUTH_RS05405	SM00357	Cold shock protein domain
SUTH_RS05410	SM01329	SUTH_RS05410
SUTH_RS05450	SM00671	Sel1-like repeats.
SUTH_RS05580	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SUTH_RS05580	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SUTH_RS05610	SM00829	Enoylreductase
SUTH_RS05640	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS05645	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS05670	SM00046	Diacylglycerol kinase catalytic domain (presumed)
SUTH_RS05675	SM00028	Tetratricopeptide repeats
SUTH_RS05725	SM00448	cheY-homologous receiver domain
SUTH_RS05725	SM00862	Transcriptional regulatory protein, C terminal
SUTH_RS05730	SM00387	Histidine kinase-like ATPases
SUTH_RS05765	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
SUTH_RS05765	SM00240	Forkhead associated domain
SUTH_RS05780	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS05800	SM00257	Lysin motif
SUTH_RS05810	SM00849	Metallo-beta-lactamase superfamily
SUTH_RS05825	SM00479	SUTH_RS05825
SUTH_RS05845	SM00829	Enoylreductase
SUTH_RS05935	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS05980	SM00966	SpoVT / AbrB like domain 
SUTH_RS06005	SM00052	Putative diguanylate phosphodiesterase
SUTH_RS06005	SM00267	diguanylate cyclase
SUTH_RS06035	SM00267	diguanylate cyclase
SUTH_RS06040	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SUTH_RS06095	SM00347	helix_turn_helix multiple antibiotic resistance protein
SUTH_RS06105	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS06110	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS06260	SM00267	diguanylate cyclase
SUTH_RS06260	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SUTH_RS06285	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS06305	SM00919	Malic enzyme, NAD binding domain
SUTH_RS06305	SM01274	SUTH_RS06305
SUTH_RS06345	SM00530	Helix-turn-helix XRE-family like proteins 
SUTH_RS06385	SM00479	SUTH_RS06385
SUTH_RS06400	SM00357	Cold shock protein domain
SUTH_RS06400	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS06400	SM00959	Rho termination factor, N-terminal domain
SUTH_RS06440	SM01329	SUTH_RS06440
SUTH_RS06445	SM00859	Semialdehyde dehydrogenase, NAD binding domain
SUTH_RS06530	SM00028	Tetratricopeptide repeats
SUTH_RS06535	SM00840	SUTH_RS06535
SUTH_RS06570	SM00271	DnaJ molecular chaperone homology domain
SUTH_RS06585	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SUTH_RS06585	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SUTH_RS06645	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
SUTH_RS06655	SM00851	MGS-like domain
SUTH_RS06655	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
SUTH_RS06680	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS06695	SM00052	Putative diguanylate phosphodiesterase
SUTH_RS06695	SM00267	diguanylate cyclase
SUTH_RS06710	SM00331	Sigma factor PP2C-like phosphatases
SUTH_RS06750	SM00563	Phosphate acyltransferases
SUTH_RS06770	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS06865	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
SUTH_RS06870	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
SUTH_RS06915	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SUTH_RS06920	SM00421	helix_turn_helix, Lux Regulon
SUTH_RS06920	SM00448	cheY-homologous receiver domain
SUTH_RS06930	SM00829	Enoylreductase
SUTH_RS06940	SM00116	Domain in cystathionine beta-synthase and other proteins.
SUTH_RS06975	SM00530	Helix-turn-helix XRE-family like proteins 
SUTH_RS06985	SM00530	Helix-turn-helix XRE-family like proteins 
SUTH_RS07055	SM00900	SUTH_RS07055
SUTH_RS07090	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
SUTH_RS07090	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
SUTH_RS07220	SM00849	Metallo-beta-lactamase superfamily
SUTH_RS07275	SM00267	diguanylate cyclase
SUTH_RS07285	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS07285	SM00448	cheY-homologous receiver domain
SUTH_RS07295	SM00387	Histidine kinase-like ATPases
SUTH_RS07295	SM00388	His Kinase A (phosphoacceptor) domain
SUTH_RS07340	SM00028	Tetratricopeptide repeats
SUTH_RS07355	SM00346	helix_turn_helix isocitrate lyase regulation
SUTH_RS07390	SM00893	Electron transfer flavoprotein domain
SUTH_RS07395	SM00893	Electron transfer flavoprotein domain
SUTH_RS07430	SM00363	S4 RNA-binding domain
SUTH_RS07465	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS07470	SM00670	Large family of predicted nucleotide-binding domains
SUTH_RS07550	SM00434	DNA Topoisomerase IV
SUTH_RS07555	SM00387	Histidine kinase-like ATPases
SUTH_RS07555	SM00433	TopoisomeraseII
SUTH_RS07605	SM00481	DNA polymerase alpha chain like domain
SUTH_RS07635	SM00363	S4 RNA-binding domain
SUTH_RS07645	SM00316	Ribosomal protein S1-like RNA-binding domain
SUTH_RS07645	SM00322	K homology RNA-binding domain
SUTH_RS07665	SM01387	SUTH_RS07665
SUTH_RS07670	SM00316	Ribosomal protein S1-like RNA-binding domain
SUTH_RS07670	SM00322	K homology RNA-binding domain
SUTH_RS07685	SM00507	HNH nucleases
SUTH_RS07705	SM00855	Phosphoglycerate mutase family
SUTH_RS07750	SM00903	Flavin reductase like domain
SUTH_RS07760	SM00014	Acid phosphatase homologues
SUTH_RS07790	SM00841	Elongation factor P, C-terminal
SUTH_RS07790	SM01185	SUTH_RS07790
SUTH_RS07800	SM00986	Uracil DNA glycosylase superfamily
SUTH_RS07800	SM00987	UreE urease accessory protein, C-terminal domain 
SUTH_RS07805	SM00278	Helix-hairpin-helix DNA-binding motif class 1
SUTH_RS07805	SM00465	GIY-YIG type nucleases (URI domain)
SUTH_RS07835	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SUTH_RS07850	SM00530	Helix-turn-helix XRE-family like proteins 
SUTH_RS07945	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
SUTH_RS07945	SM00534	ATPase domain of DNA mismatch repair MUTS family
SUTH_RS07990	SM00271	DnaJ molecular chaperone homology domain
SUTH_RS08020	SM00838	Elongation factor G C-terminus
SUTH_RS08035	SM00267	diguanylate cyclase
SUTH_RS08045	SM00881	CoA binding domain
SUTH_RS08125	SM00829	Enoylreductase
SUTH_RS08130	SM00530	Helix-turn-helix XRE-family like proteins 
SUTH_RS08165	SM00530	Helix-turn-helix XRE-family like proteins 
SUTH_RS08205	SM00481	DNA polymerase alpha chain like domain
SUTH_RS08220	SM00829	Enoylreductase
SUTH_RS08230	SM00822	SUTH_RS08230
SUTH_RS08260	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS08265	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS08285	SM00790	Aldehyde ferredoxin oxidoreductase, N-terminal domain
SUTH_RS08290	SM00347	helix_turn_helix multiple antibiotic resistance protein
SUTH_RS08330	SM00028	Tetratricopeptide repeats
SUTH_RS08375	SM00248	ankyrin repeats
SUTH_RS08385	SM01322	SUTH_RS08385
SUTH_RS08420	SM01126	SUTH_RS08420
SUTH_RS08470	SM00487	DEAD-like helicases superfamily
SUTH_RS08470	SM00490	helicase superfamily c-terminal domain
SUTH_RS08475	SM00226	Low molecular weight phosphatase family
SUTH_RS08480	SM00316	Ribosomal protein S1-like RNA-binding domain
SUTH_RS08485	SM00363	S4 RNA-binding domain
SUTH_RS08520	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS08550	SM00563	Phosphate acyltransferases
SUTH_RS08550	SM00823	Phosphopantetheine attachment site
SUTH_RS08565	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS08570	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS08630	SM00968	SMC proteins Flexible Hinge Domain
SUTH_RS08635	SM00771	ZipA, C-terminal domain (FtsZ-binding)
SUTH_RS08640	SM00278	Helix-hairpin-helix DNA-binding motif class 1
SUTH_RS08640	SM00292	breast cancer carboxy-terminal domain
SUTH_RS08640	SM00532	Ligase N family
SUTH_RS08655	SM00411	bacterial (prokaryotic) histone like domain
SUTH_RS08660	SM00052	Putative diguanylate phosphodiesterase
SUTH_RS08660	SM00267	diguanylate cyclase
SUTH_RS08680	SM00267	diguanylate cyclase
SUTH_RS08685	SM00487	DEAD-like helicases superfamily
SUTH_RS08685	SM00490	helicase superfamily c-terminal domain
SUTH_RS08685	SM00982	SUTH_RS08685
SUTH_RS08685	SM01058	CarD-like/TRCF domain
SUTH_RS08735	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SUTH_RS08735	SM00091	PAS domain
SUTH_RS08735	SM00387	Histidine kinase-like ATPases
SUTH_RS08735	SM00388	His Kinase A (phosphoacceptor) domain
SUTH_RS08735	SM00448	cheY-homologous receiver domain
SUTH_RS08750	SM00387	Histidine kinase-like ATPases
SUTH_RS08750	SM00388	His Kinase A (phosphoacceptor) domain
SUTH_RS08755	SM00448	cheY-homologous receiver domain
SUTH_RS08755	SM00862	Transcriptional regulatory protein, C terminal
SUTH_RS08835	SM00100	Cyclic nucleotide-monophosphate binding domain
SUTH_RS08855	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SUTH_RS08855	SM00387	Histidine kinase-like ATPases
SUTH_RS08855	SM00388	His Kinase A (phosphoacceptor) domain
SUTH_RS08860	SM00448	cheY-homologous receiver domain
SUTH_RS08860	SM00862	Transcriptional regulatory protein, C terminal
SUTH_RS08885	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SUTH_RS08885	SM00091	PAS domain
SUTH_RS08885	SM00387	Histidine kinase-like ATPases
SUTH_RS08890	SM00421	helix_turn_helix, Lux Regulon
SUTH_RS08890	SM00448	cheY-homologous receiver domain
SUTH_RS08940	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SUTH_RS08940	SM00866	SUTH_RS08940
SUTH_RS08975	SM00861	Transketolase, pyrimidine binding domain
SUTH_RS09010	SM00100	Cyclic nucleotide-monophosphate binding domain
SUTH_RS09015	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS09040	SM00736	Dystroglycan-type cadherin-like domains.
SUTH_RS09065	SM00387	Histidine kinase-like ATPases
SUTH_RS09080	SM00448	cheY-homologous receiver domain
SUTH_RS09095	SM00448	cheY-homologous receiver domain
SUTH_RS09095	SM00862	Transcriptional regulatory protein, C terminal
SUTH_RS09120	SM00448	cheY-homologous receiver domain
SUTH_RS09125	SM00052	Putative diguanylate phosphodiesterase
SUTH_RS09125	SM00091	PAS domain
SUTH_RS09125	SM00267	diguanylate cyclase
SUTH_RS09130	SM00448	cheY-homologous receiver domain
SUTH_RS09140	SM00448	cheY-homologous receiver domain
SUTH_RS09145	SM00507	HNH nucleases
SUTH_RS09180	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS09185	SM00248	ankyrin repeats
SUTH_RS09195	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS09235	SM00248	ankyrin repeats
SUTH_RS09245	SM00479	SUTH_RS09245
SUTH_RS09260	SM00530	Helix-turn-helix XRE-family like proteins 
SUTH_RS09265	SM00411	bacterial (prokaryotic) histone like domain
SUTH_RS09315	SM00400	zinc finger
SUTH_RS09335	SM00671	Sel1-like repeats.
SUTH_RS09355	SM00671	Sel1-like repeats.
SUTH_RS09555	SM00318	Staphylococcal nuclease homologues
SUTH_RS09590	SM00255	Toll - interleukin 1 - resistance
SUTH_RS09610	SM00255	Toll - interleukin 1 - resistance
SUTH_RS09615	SM00487	DEAD-like helicases superfamily
SUTH_RS09655	SM00778	Zinc-binding domain of primase-helicase
SUTH_RS09660	SM00487	DEAD-like helicases superfamily
SUTH_RS09710	SM00470	ParB-like nuclease domain
SUTH_RS09750	SM00411	bacterial (prokaryotic) histone like domain
SUTH_RS09755	SM00363	S4 RNA-binding domain
SUTH_RS09780	SM00116	Domain in cystathionine beta-synthase and other proteins.
SUTH_RS09780	SM01240	SUTH_RS09780
SUTH_RS09815	SM00341	Helicase and RNase D C-terminal
SUTH_RS09815	SM00487	DEAD-like helicases superfamily
SUTH_RS09815	SM00490	helicase superfamily c-terminal domain
SUTH_RS09815	SM00956	SUTH_RS09815
SUTH_RS09840	SM00984	UDP binding domain
SUTH_RS09845	SM00028	Tetratricopeptide repeats
SUTH_RS09855	SM00411	bacterial (prokaryotic) histone like domain
SUTH_RS09860	SM00316	Ribosomal protein S1-like RNA-binding domain
SUTH_RS09880	SM00830	Chorismate mutase type II
SUTH_RS09895	SM00434	DNA Topoisomerase IV
SUTH_RS09930	SM00387	Histidine kinase-like ATPases
SUTH_RS09935	SM00421	helix_turn_helix, Lux Regulon
SUTH_RS09935	SM00448	cheY-homologous receiver domain
SUTH_RS09940	SM00267	diguanylate cyclase
SUTH_RS09945	SM00116	Domain in cystathionine beta-synthase and other proteins.
SUTH_RS09950	SM00220	Serine/Threonine protein kinases, catalytic domain
SUTH_RS09985	SM00267	diguanylate cyclase
SUTH_RS09985	SM01079	SUTH_RS09985
SUTH_RS10000	SM00091	PAS domain
SUTH_RS10000	SM00387	Histidine kinase-like ATPases
SUTH_RS10020	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS10020	SM00448	cheY-homologous receiver domain
SUTH_RS10135	SM00487	DEAD-like helicases superfamily
SUTH_RS10135	SM00490	helicase superfamily c-terminal domain
SUTH_RS10145	SM00052	Putative diguanylate phosphodiesterase
SUTH_RS10145	SM00267	diguanylate cyclase
SUTH_RS10170	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
SUTH_RS10175	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
SUTH_RS10215	SM00387	Histidine kinase-like ATPases
SUTH_RS10215	SM00388	His Kinase A (phosphoacceptor) domain
SUTH_RS10220	SM00421	helix_turn_helix, Lux Regulon
SUTH_RS10220	SM00448	cheY-homologous receiver domain
SUTH_RS10275	SM00530	Helix-turn-helix XRE-family like proteins 
SUTH_RS10300	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS10320	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS10330	SM00822	SUTH_RS10330
SUTH_RS10335	SM00822	SUTH_RS10335
SUTH_RS10355	SM00346	helix_turn_helix isocitrate lyase regulation
SUTH_RS10380	SM00387	Histidine kinase-like ATPases
SUTH_RS10380	SM00388	His Kinase A (phosphoacceptor) domain
SUTH_RS10380	SM00448	cheY-homologous receiver domain
SUTH_RS10385	SM00448	cheY-homologous receiver domain
SUTH_RS10385	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SUTH_RS10390	SM00091	PAS domain
SUTH_RS10395	SM00138	Methyltransferase, chemotaxis proteins 
SUTH_RS10400	SM00073	Histidine Phosphotransfer domain
SUTH_RS10400	SM00091	PAS domain
SUTH_RS10400	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SUTH_RS10400	SM00387	Histidine kinase-like ATPases
SUTH_RS10400	SM00388	His Kinase A (phosphoacceptor) domain
SUTH_RS10400	SM00448	cheY-homologous receiver domain
SUTH_RS10450	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS10460	SM00248	ankyrin repeats
SUTH_RS10480	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
SUTH_RS10480	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SUTH_RS10480	SM00091	PAS domain
SUTH_RS10525	SM00493	SUTH_RS10525
SUTH_RS10535	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS10560	SM00790	Aldehyde ferredoxin oxidoreductase, N-terminal domain
SUTH_RS10580	SM00849	Metallo-beta-lactamase superfamily
SUTH_RS10585	SM00116	Domain in cystathionine beta-synthase and other proteins.
SUTH_RS10605	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS10635	SM00966	SpoVT / AbrB like domain 
SUTH_RS10685	SM00028	Tetratricopeptide repeats
SUTH_RS10715	SM00344	helix_turn_helix ASNC type
SUTH_RS10730	SM00729	Elongator protein 3, MiaB family, Radical SAM
SUTH_RS10735	SM00852	Probable molybdopterin binding domain
SUTH_RS10740	SM00028	Tetratricopeptide repeats
SUTH_RS10775	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS10830	SM00530	Helix-turn-helix XRE-family like proteins 
SUTH_RS10870	SM00358	Double-stranded RNA binding motif
SUTH_RS10870	SM00535	Ribonuclease III family
SUTH_RS10885	SM00838	Elongation factor G C-terminus
SUTH_RS10895	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
SUTH_RS10930	SM00825	Beta-ketoacyl synthase
SUTH_RS10940	SM00822	SUTH_RS10940
SUTH_RS10945	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
SUTH_RS11065	SM01211	SUTH_RS11065
SUTH_RS11070	SM00267	diguanylate cyclase
SUTH_RS11080	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SUTH_RS11080	SM00091	PAS domain
SUTH_RS11080	SM00267	diguanylate cyclase
SUTH_RS11085	SM01329	SUTH_RS11085
SUTH_RS11150	SM00062	Bacterial periplasmic substrate-binding proteins
SUTH_RS11155	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS11160	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS11195	SM01005	Alanine racemase, C-terminal domain
SUTH_RS11215	SM00986	Uracil DNA glycosylase superfamily
SUTH_RS11215	SM00987	UreE urease accessory protein, C-terminal domain 
SUTH_RS11230	SM00244	prohibitin homologues
SUTH_RS11240	SM00411	bacterial (prokaryotic) histone like domain
SUTH_RS11245	SM00967	RNA 2'-O ribose methyltransferase substrate binding
SUTH_RS11275	SM00935	Outer membrane protein (OmpH-like)
SUTH_RS11285	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
SUTH_RS11335	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SUTH_RS11340	SM00100	Cyclic nucleotide-monophosphate binding domain
SUTH_RS11385	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS11415	SM00363	S4 RNA-binding domain
SUTH_RS11445	SM00116	Domain in cystathionine beta-synthase and other proteins.
SUTH_RS11470	SM00448	cheY-homologous receiver domain
SUTH_RS11475	SM00387	Histidine kinase-like ATPases
SUTH_RS11475	SM00388	His Kinase A (phosphoacceptor) domain
SUTH_RS11520	SM00954	Region found in RelA / SpoT proteins
SUTH_RS11535	SM00052	Putative diguanylate phosphodiesterase
SUTH_RS11535	SM00091	PAS domain
SUTH_RS11535	SM00267	diguanylate cyclase
SUTH_RS11610	SM00698	Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases.
SUTH_RS11655	SM00829	Enoylreductase
SUTH_RS11705	SM00487	DEAD-like helicases superfamily
SUTH_RS11705	SM00490	helicase superfamily c-terminal domain
SUTH_RS11720	SM01192	SUTH_RS11720
SUTH_RS11720	SM01193	SUTH_RS11720
SUTH_RS11745	SM00937	SUTH_RS11745
SUTH_RS11815	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS11825	SM01043	Bacterial transcriptional activator domain
SUTH_RS11905	SM00028	Tetratricopeptide repeats
SUTH_RS11910	SM00671	Sel1-like repeats.
SUTH_RS11940	SM00858	SUTH_RS11940
SUTH_RS11950	SM00240	Forkhead associated domain
SUTH_RS11985	SM00912	haemagglutination activity domain
SUTH_RS12000	SM00100	Cyclic nucleotide-monophosphate binding domain
SUTH_RS12035	SM00849	Metallo-beta-lactamase superfamily
SUTH_RS12045	SM01130	SUTH_RS12045
SUTH_RS12065	SM00460	Transglutaminase/protease-like homologues
SUTH_RS12080	SM00257	Lysin motif
SUTH_RS12115	SM00422	helix_turn_helix, mercury resistance
SUTH_RS12120	SM00411	bacterial (prokaryotic) histone like domain
SUTH_RS12125	SM00873	B3/4 domain
SUTH_RS12125	SM00874	tRNA synthetase B5 domain
SUTH_RS12125	SM00896	Ferredoxin-fold anticodon binding domain
SUTH_RS12150	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
SUTH_RS12170	SM00829	Enoylreductase
SUTH_RS12185	SM00704	CDGSH-type zinc finger. Function unknown.
SUTH_RS12195	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS12225	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS12225	SM00464	Found in ATP-dependent protease La (LON)
SUTH_RS12230	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS12230	SM00994	ClpX C4-type zinc finger
SUTH_RS12230	SM01086	C-terminal, D2-small domain, of ClpB protein
SUTH_RS12265	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS12275	SM00450	Rhodanese Homology Domain
SUTH_RS12280	SM00448	cheY-homologous receiver domain
SUTH_RS12280	SM00850	LytTr DNA-binding domain
SUTH_RS12285	SM00387	Histidine kinase-like ATPases
SUTH_RS12300	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
SUTH_RS12305	SM00881	CoA binding domain
SUTH_RS12315	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
SUTH_RS12315	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SUTH_RS12315	SM00091	PAS domain
SUTH_RS12340	SM00966	SpoVT / AbrB like domain 
SUTH_RS12345	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS12345	SM01086	C-terminal, D2-small domain, of ClpB protein
SUTH_RS12355	SM00267	diguanylate cyclase
SUTH_RS12355	SM00448	cheY-homologous receiver domain
SUTH_RS12385	SM00852	Probable molybdopterin binding domain
SUTH_RS12400	SM00487	DEAD-like helicases superfamily
SUTH_RS12400	SM00491	SUTH_RS12400
SUTH_RS12445	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SUTH_RS12470	SM00091	PAS domain
SUTH_RS12470	SM00138	Methyltransferase, chemotaxis proteins 
SUTH_RS12485	SM00448	cheY-homologous receiver domain
SUTH_RS12485	SM01012	SUTH_RS12485
SUTH_RS12490	SM00052	Putative diguanylate phosphodiesterase
SUTH_RS12490	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SUTH_RS12490	SM00091	PAS domain
SUTH_RS12490	SM00267	diguanylate cyclase
SUTH_RS12500	SM00448	cheY-homologous receiver domain
SUTH_RS12500	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SUTH_RS12505	SM00448	cheY-homologous receiver domain
SUTH_RS12555	SM00849	Metallo-beta-lactamase superfamily
SUTH_RS12595	SM00822	SUTH_RS12595
SUTH_RS12605	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SUTH_RS12640	SM00100	Cyclic nucleotide-monophosphate binding domain
SUTH_RS12725	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS12750	SM00729	Elongator protein 3, MiaB family, Radical SAM
SUTH_RS12755	SM00710	Parallel beta-helix repeats
SUTH_RS12755	SM00722	Domain present in carbohydrate binding proteins and sugar hydrolses
SUTH_RS12780	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS12795	SM00710	Parallel beta-helix repeats
SUTH_RS12795	SM00722	Domain present in carbohydrate binding proteins and sugar hydrolses
SUTH_RS12825	SM00448	cheY-homologous receiver domain
SUTH_RS12830	SM00387	Histidine kinase-like ATPases
SUTH_RS12830	SM00388	His Kinase A (phosphoacceptor) domain
SUTH_RS12850	SM00344	helix_turn_helix ASNC type
SUTH_RS12870	SM00887	Ethylbenzene dehydrogenase
SUTH_RS12895	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS12920	SM00530	Helix-turn-helix XRE-family like proteins 
SUTH_RS13060	SM00855	Phosphoglycerate mutase family
SUTH_RS13065	SM00091	PAS domain
SUTH_RS13065	SM00267	diguanylate cyclase
SUTH_RS13070	SM00506	Appr-1"-p processing enzyme
SUTH_RS13095	SM00530	Helix-turn-helix XRE-family like proteins 
SUTH_RS13145	SM00729	Elongator protein 3, MiaB family, Radical SAM
SUTH_RS13155	SM00822	SUTH_RS13155
SUTH_RS13160	SM00822	SUTH_RS13160
SUTH_RS13215	SM00387	Histidine kinase-like ATPases
SUTH_RS13215	SM00388	His Kinase A (phosphoacceptor) domain
SUTH_RS13215	SM00448	cheY-homologous receiver domain
SUTH_RS13220	SM00967	RNA 2'-O ribose methyltransferase substrate binding
SUTH_RS13260	SM00853	MutL C terminal dimerisation domain
SUTH_RS13260	SM01340	SUTH_RS13260
SUTH_RS13380	SM00861	Transketolase, pyrimidine binding domain
SUTH_RS13410	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
SUTH_RS13435	SM00917	LeuA allosteric (dimerisation) domain
SUTH_RS13540	SM01323	SUTH_RS13540
SUTH_RS13555	SM00100	Cyclic nucleotide-monophosphate binding domain
SUTH_RS13555	SM00419	helix_turn_helix, cAMP Regulatory protein
SUTH_RS13600	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS13610	SM00880	SUTH_RS13610
SUTH_RS13610	SM01118	SUTH_RS13610
SUTH_RS13615	SM00855	Phosphoglycerate mutase family
SUTH_RS13620	SM00347	helix_turn_helix multiple antibiotic resistance protein
SUTH_RS13645	SM00052	Putative diguanylate phosphodiesterase
SUTH_RS13645	SM00267	diguanylate cyclase
SUTH_RS13645	SM00448	cheY-homologous receiver domain
SUTH_RS13650	SM00448	cheY-homologous receiver domain
SUTH_RS13655	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SUTH_RS13655	SM00091	PAS domain
SUTH_RS13655	SM00387	Histidine kinase-like ATPases
SUTH_RS13655	SM00388	His Kinase A (phosphoacceptor) domain
SUTH_RS13660	SM00487	DEAD-like helicases superfamily
SUTH_RS13660	SM00490	helicase superfamily c-terminal domain
SUTH_RS13670	SM00116	Domain in cystathionine beta-synthase and other proteins.
SUTH_RS13675	SM00448	cheY-homologous receiver domain
SUTH_RS13745	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
SUTH_RS13765	SM00267	diguanylate cyclase
SUTH_RS13880	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS13905	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SUTH_RS13905	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SUTH_RS13910	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SUTH_RS13910	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS13915	SM00100	Cyclic nucleotide-monophosphate binding domain
SUTH_RS13915	SM00450	Rhodanese Homology Domain
SUTH_RS13920	SM00849	Metallo-beta-lactamase superfamily
SUTH_RS13925	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
SUTH_RS13925	SM01080	SUTH_RS13925
SUTH_RS13930	SM00240	Forkhead associated domain
SUTH_RS13935	SM00331	Sigma factor PP2C-like phosphatases
SUTH_RS13935	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
SUTH_RS13940	SM00220	Serine/Threonine protein kinases, catalytic domain
SUTH_RS13940	SM01080	SUTH_RS13940
SUTH_RS13945	SM00881	CoA binding domain
SUTH_RS14040	SM00849	Metallo-beta-lactamase superfamily
SUTH_RS14045	SM00248	ankyrin repeats
SUTH_RS14055	SM00052	Putative diguanylate phosphodiesterase
SUTH_RS14055	SM00267	diguanylate cyclase
SUTH_RS14065	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
SUTH_RS14095	SM00052	Putative diguanylate phosphodiesterase
SUTH_RS14095	SM00267	diguanylate cyclase
SUTH_RS14165	SM00670	Large family of predicted nucleotide-binding domains
SUTH_RS14200	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS14230	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS14235	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS14235	SM00448	cheY-homologous receiver domain
SUTH_RS14255	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS14295	SM00422	helix_turn_helix, mercury resistance
SUTH_RS14320	SM00878	Biotin carboxylase C-terminal domain
SUTH_RS14355	SM00091	PAS domain
SUTH_RS14355	SM00331	Sigma factor PP2C-like phosphatases
SUTH_RS14355	SM00448	cheY-homologous receiver domain
SUTH_RS14360	SM00448	cheY-homologous receiver domain
SUTH_RS14400	SM00448	cheY-homologous receiver domain
SUTH_RS14400	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SUTH_RS14405	SM00448	cheY-homologous receiver domain
SUTH_RS14440	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SUTH_RS14440	SM00895	SUTH_RS14440
SUTH_RS14480	SM00910	SUTH_RS14480
SUTH_RS14490	SM00749	bacterial OsmY and nodulation domain
SUTH_RS14560	SM00014	Acid phosphatase homologues
SUTH_RS14570	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
SUTH_RS14570	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
SUTH_RS14625	SM00867	YceI-like domain 
SUTH_RS14630	SM00867	YceI-like domain 
SUTH_RS14660	SM00052	Putative diguanylate phosphodiesterase
SUTH_RS14660	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SUTH_RS14660	SM00091	PAS domain
SUTH_RS14660	SM00267	diguanylate cyclase
SUTH_RS14695	SM00966	SpoVT / AbrB like domain 
SUTH_RS14740	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SUTH_RS14740	SM00267	diguanylate cyclase
SUTH_RS14755	SM00100	Cyclic nucleotide-monophosphate binding domain
SUTH_RS14775	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SUTH_RS14775	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SUTH_RS14780	SM01049	SUTH_RS14780
SUTH_RS14800	SM00267	diguanylate cyclase
SUTH_RS14800	SM00448	cheY-homologous receiver domain
SUTH_RS14830	SM00861	Transketolase, pyrimidine binding domain
SUTH_RS14860	SM00829	Enoylreductase
SUTH_RS14890	SM01001	AIR carboxylase
SUTH_RS14935	SM00919	Malic enzyme, NAD binding domain
SUTH_RS14935	SM01274	SUTH_RS14935
SUTH_RS14955	SM00644	SUTH_RS14955
SUTH_RS14960	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS14960	SM00448	cheY-homologous receiver domain
SUTH_RS14965	SM00387	Histidine kinase-like ATPases
SUTH_RS14965	SM00388	His Kinase A (phosphoacceptor) domain
SUTH_RS14985	SM00448	cheY-homologous receiver domain
SUTH_RS14985	SM00850	LytTr DNA-binding domain
SUTH_RS15000	SM00100	Cyclic nucleotide-monophosphate binding domain
SUTH_RS15000	SM00220	Serine/Threonine protein kinases, catalytic domain
SUTH_RS15035	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
SUTH_RS15090	SM00267	diguanylate cyclase
SUTH_RS15100	SM00052	Putative diguanylate phosphodiesterase
SUTH_RS15100	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SUTH_RS15100	SM00091	PAS domain
SUTH_RS15100	SM00267	diguanylate cyclase
SUTH_RS15120	SM00091	PAS domain
SUTH_RS15120	SM00267	diguanylate cyclase
SUTH_RS15135	SM00966	SpoVT / AbrB like domain 
SUTH_RS15160	SM00100	Cyclic nucleotide-monophosphate binding domain
SUTH_RS15160	SM00267	diguanylate cyclase
SUTH_RS15165	SM00852	Probable molybdopterin binding domain
SUTH_RS15175	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS15175	SM00487	DEAD-like helicases superfamily
SUTH_RS15175	SM00490	helicase superfamily c-terminal domain
SUTH_RS15175	SM00847	Helicase associated domain (HA2)  Add an annotation
SUTH_RS15210	SM00052	Putative diguanylate phosphodiesterase
SUTH_RS15210	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SUTH_RS15210	SM00091	PAS domain
SUTH_RS15210	SM00116	Domain in cystathionine beta-synthase and other proteins.
SUTH_RS15210	SM00267	diguanylate cyclase
SUTH_RS15215	SM00073	Histidine Phosphotransfer domain
SUTH_RS15225	SM00028	Tetratricopeptide repeats
SUTH_RS15225	SM00448	cheY-homologous receiver domain
SUTH_RS15235	SM01007	Class II Aldolase and Adducin N-terminal domain
SUTH_RS15245	SM00957	SecA DEAD-like domain
SUTH_RS15245	SM00958	SecA preprotein cross-linking domain
SUTH_RS15270	SM00864	Tubulin/FtsZ family, GTPase domain
SUTH_RS15270	SM00865	Tubulin/FtsZ family, C-terminal domain
SUTH_RS15275	SM00842	Cell division protein FtsA
SUTH_RS15400	SM00831	Cation transporter/ATPase, N-terminus
SUTH_RS15405	SM00052	Putative diguanylate phosphodiesterase
SUTH_RS15405	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SUTH_RS15405	SM00091	PAS domain
SUTH_RS15405	SM00267	diguanylate cyclase
SUTH_RS15430	SM00346	helix_turn_helix isocitrate lyase regulation
SUTH_RS15450	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
SUTH_RS15460	SM00966	SpoVT / AbrB like domain 
SUTH_RS15465	SM01321	SUTH_RS15465
SUTH_RS15510	SM00363	S4 RNA-binding domain
SUTH_RS15540	SM00859	Semialdehyde dehydrogenase, NAD binding domain
SUTH_RS15565	SM00729	Elongator protein 3, MiaB family, Radical SAM
SUTH_RS15580	SM00116	Domain in cystathionine beta-synthase and other proteins.
SUTH_RS15580	SM01091	Transporter associated domain
SUTH_RS15610	SM00563	Phosphate acyltransferases
SUTH_RS15665	SM00387	Histidine kinase-like ATPases
SUTH_RS15665	SM00388	His Kinase A (phosphoacceptor) domain
SUTH_RS15665	SM00448	cheY-homologous receiver domain
SUTH_RS15675	SM00448	cheY-homologous receiver domain
SUTH_RS15675	SM00862	Transcriptional regulatory protein, C terminal
SUTH_RS15680	SM00387	Histidine kinase-like ATPases
SUTH_RS15680	SM00388	His Kinase A (phosphoacceptor) domain
SUTH_RS15690	SM00671	Sel1-like repeats.
SUTH_RS15710	SM00487	DEAD-like helicases superfamily
SUTH_RS15710	SM00490	helicase superfamily c-terminal domain
SUTH_RS15745	SM00852	Probable molybdopterin binding domain
SUTH_RS15750	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS15780	SM00642	Alpha-amylase domain
SUTH_RS15855	SM00670	Large family of predicted nucleotide-binding domains
SUTH_RS15910	SM01080	SUTH_RS15910
SUTH_RS15955	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SUTH_RS15965	SM00481	DNA polymerase alpha chain like domain
SUTH_RS15980	SM00829	Enoylreductase
SUTH_RS15985	SM00919	Malic enzyme, NAD binding domain
SUTH_RS15985	SM01274	SUTH_RS15985
SUTH_RS15990	SM00052	Putative diguanylate phosphodiesterase
SUTH_RS15990	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SUTH_RS15990	SM00267	diguanylate cyclase
SUTH_RS15990	SM00448	cheY-homologous receiver domain
SUTH_RS15995	SM00421	helix_turn_helix, Lux Regulon
SUTH_RS15995	SM00448	cheY-homologous receiver domain
SUTH_RS16000	SM00387	Histidine kinase-like ATPases
SUTH_RS16025	SM00530	Helix-turn-helix XRE-family like proteins 
SUTH_RS16110	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SUTH_RS16115	SM00052	Putative diguanylate phosphodiesterase
SUTH_RS16115	SM00267	diguanylate cyclase
SUTH_RS16120	SM00100	Cyclic nucleotide-monophosphate binding domain
SUTH_RS16165	SM00905	Dihydroneopterin aldolase
SUTH_RS16170	SM01207	SUTH_RS16170
SUTH_RS16195	SM00729	Elongator protein 3, MiaB family, Radical SAM
SUTH_RS16200	SM01359	SUTH_RS16200
SUTH_RS16200	SM01360	SUTH_RS16200
SUTH_RS16245	SM00400	zinc finger
SUTH_RS16245	SM00493	SUTH_RS16245
SUTH_RS16245	SM00766	DNA primase DnaG DnaB-binding
SUTH_RS16270	SM00465	GIY-YIG type nucleases (URI domain)
SUTH_RS16270	SM00479	SUTH_RS16270
SUTH_RS16275	SM00729	Elongator protein 3, MiaB family, Radical SAM
SUTH_RS16290	SM00996	S-adenosyl-L-homocysteine hydrolase
SUTH_RS16290	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
SUTH_RS16305	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SUTH_RS16305	SM00387	Histidine kinase-like ATPases
SUTH_RS16305	SM00388	His Kinase A (phosphoacceptor) domain
SUTH_RS16305	SM00448	cheY-homologous receiver domain
SUTH_RS16360	SM00278	Helix-hairpin-helix DNA-binding motif class 1
SUTH_RS16365	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS16425	SM00881	CoA binding domain
SUTH_RS16440	SM00091	PAS domain
SUTH_RS16460	SM01400	SUTH_RS16460
SUTH_RS16480	SM00028	Tetratricopeptide repeats
SUTH_RS16485	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
SUTH_RS16485	SM01232	SUTH_RS16485
SUTH_RS16515	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS16515	SM00962	SRP54-type protein, GTPase domain
SUTH_RS16515	SM00963	SRP54-type protein, helical bundle domain
SUTH_RS16520	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS16605	SM00878	Biotin carboxylase C-terminal domain
SUTH_RS16695	SM00729	Elongator protein 3, MiaB family, Radical SAM
SUTH_RS16810	SM00858	SUTH_RS16810
SUTH_RS16830	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
SUTH_RS16915	SM00450	Rhodanese Homology Domain
SUTH_RS16940	SM01240	SUTH_RS16940
SUTH_RS16950	SM01057	Eukaryotic-type carbonic anhydrase
SUTH_RS16960	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SUTH_RS16985	SM00955	SUTH_RS16985
SUTH_RS17030	SM00448	cheY-homologous receiver domain
SUTH_RS17035	SM00448	cheY-homologous receiver domain
SUTH_RS17045	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SUTH_RS17050	SM00073	Histidine Phosphotransfer domain
SUTH_RS17050	SM00260	Two component signalling adaptor domain
SUTH_RS17050	SM00387	Histidine kinase-like ATPases
SUTH_RS17050	SM00448	cheY-homologous receiver domain
SUTH_RS17050	SM01231	SUTH_RS17050
SUTH_RS17060	SM00267	diguanylate cyclase
SUTH_RS17095	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SUTH_RS17095	SM00387	Histidine kinase-like ATPases
SUTH_RS17095	SM00388	His Kinase A (phosphoacceptor) domain
SUTH_RS17100	SM00448	cheY-homologous receiver domain
SUTH_RS17100	SM00862	Transcriptional regulatory protein, C terminal
SUTH_RS17145	SM00450	Rhodanese Homology Domain
SUTH_RS17150	SM00878	Biotin carboxylase C-terminal domain
SUTH_RS17170	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SUTH_RS17170	SM00895	SUTH_RS17170
SUTH_RS17190	SM00912	haemagglutination activity domain
SUTH_RS17260	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS17270	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS17325	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS17335	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS17350	SM00563	Phosphate acyltransferases
SUTH_RS17355	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS17380	SM00448	cheY-homologous receiver domain
SUTH_RS17435	SM00530	Helix-turn-helix XRE-family like proteins 
SUTH_RS17495	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS17535	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
SUTH_RS17535	SM00474	3'-5' exonuclease
SUTH_RS17535	SM00475	5'-3' exonuclease
SUTH_RS17535	SM00482	DNA polymerase A domain
SUTH_RS17540	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS17620	SM00052	Putative diguanylate phosphodiesterase
SUTH_RS17650	SM00563	Phosphate acyltransferases
SUTH_RS17680	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SUTH_RS17680	SM00895	SUTH_RS17680
SUTH_RS17725	SM00052	Putative diguanylate phosphodiesterase
SUTH_RS17725	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SUTH_RS17725	SM00091	PAS domain
SUTH_RS17725	SM00267	diguanylate cyclase
SUTH_RS17725	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SUTH_RS17730	SM00450	Rhodanese Homology Domain
SUTH_RS17735	SM00450	Rhodanese Homology Domain
SUTH_RS17740	SM01018	B12 binding domain
SUTH_RS17795	SM00052	Putative diguanylate phosphodiesterase
SUTH_RS17795	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SUTH_RS17795	SM00091	PAS domain
SUTH_RS17795	SM00267	diguanylate cyclase
SUTH_RS17860	SM00320	WD40 repeats
SUTH_RS17890	SM00869	Autotransporter beta-domain
SUTH_RS17905	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
SUTH_RS17905	SM01080	SUTH_RS17905
SUTH_RS17955	SM00387	Histidine kinase-like ATPases
SUTH_RS17955	SM00388	His Kinase A (phosphoacceptor) domain
SUTH_RS17960	SM00448	cheY-homologous receiver domain
SUTH_RS17960	SM00862	Transcriptional regulatory protein, C terminal
SUTH_RS17975	SM00978	SUTH_RS17975
SUTH_RS18020	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS18060	SM00470	ParB-like nuclease domain
SUTH_RS18075	SM01228	SUTH_RS18075
SUTH_RS18110	SM00115	Caspase, interleukin-1 beta converting enzyme (ICE) homologues
SUTH_RS18120	SM00115	Caspase, interleukin-1 beta converting enzyme (ICE) homologues
SUTH_RS18140	SM00115	Caspase, interleukin-1 beta converting enzyme (ICE) homologues
SUTH_RS18140	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
SUTH_RS18140	SM00245	tail specific protease
SUTH_RS18150	SM00028	Tetratricopeptide repeats
SUTH_RS18155	SM00052	Putative diguanylate phosphodiesterase
SUTH_RS18155	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SUTH_RS18155	SM00091	PAS domain
SUTH_RS18155	SM00267	diguanylate cyclase
SUTH_RS18155	SM00448	cheY-homologous receiver domain
SUTH_RS18160	SM00052	Putative diguanylate phosphodiesterase
SUTH_RS18160	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SUTH_RS18160	SM00091	PAS domain
SUTH_RS18160	SM00267	diguanylate cyclase
SUTH_RS18160	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SUTH_RS18195	SM00382	ATPases associated with a variety of cellular activities
SUTH_RS18210	SM00115	Caspase, interleukin-1 beta converting enzyme (ICE) homologues
SUTH_RS18210	SM00320	WD40 repeats
SUTH_RS18220	SM00115	Caspase, interleukin-1 beta converting enzyme (ICE) homologues
SUTH_RS18230	SM00115	Caspase, interleukin-1 beta converting enzyme (ICE) homologues
SUTH_RS18230	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
SUTH_RS18235	SM00320	WD40 repeats
SUTH_RS18260	SM00052	Putative diguanylate phosphodiesterase
SUTH_RS18260	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SUTH_RS18260	SM00091	PAS domain
SUTH_RS18260	SM00267	diguanylate cyclase
SUTH_RS18270	SM00912	haemagglutination activity domain
SUTH_RS18280	SM00028	Tetratricopeptide repeats
SUTH_RS18285	SM00240	Forkhead associated domain
SUTH_RS18290	SM00091	PAS domain
SUTH_RS18290	SM00387	Histidine kinase-like ATPases
SUTH_RS18290	SM00388	His Kinase A (phosphoacceptor) domain
SUTH_RS18290	SM00448	cheY-homologous receiver domain
SUTH_RS18300	SM00887	Ethylbenzene dehydrogenase
SUTH_RS18320	SM00091	PAS domain
SUTH_RS18320	SM00387	Histidine kinase-like ATPases
SUTH_RS18320	SM00388	His Kinase A (phosphoacceptor) domain
SUTH_RS18320	SM00448	cheY-homologous receiver domain
SUTH_RS18335	SM00248	ankyrin repeats
SUTH_RS18340	SM00448	cheY-homologous receiver domain
SUTH_RS18345	SM00052	Putative diguanylate phosphodiesterase
SUTH_RS18345	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SUTH_RS18345	SM00091	PAS domain
SUTH_RS18345	SM00267	diguanylate cyclase
SUTH_RS18370	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SUTH_RS18400	SM00091	PAS domain
SUTH_RS18400	SM00387	Histidine kinase-like ATPases
SUTH_RS18400	SM00388	His Kinase A (phosphoacceptor) domain
SUTH_RS18405	SM00091	PAS domain
SUTH_RS18405	SM00387	Histidine kinase-like ATPases
SUTH_RS18405	SM00388	His Kinase A (phosphoacceptor) domain
SUTH_RS18405	SM01079	SUTH_RS18405
SUTH_RS18410	SM00091	PAS domain
SUTH_RS18410	SM00387	Histidine kinase-like ATPases
SUTH_RS18410	SM00388	His Kinase A (phosphoacceptor) domain
SUTH_RS18425	SM00327	von Willebrand factor (vWF) type A domain
SUTH_RS18445	SM00530	Helix-turn-helix XRE-family like proteins 
SUTH_RS18460	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SUTH_RS18460	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SUTH_RS18465	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SUTH_RS18465	SM00091	PAS domain
SUTH_RS18465	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SUTH_RS18465	SM00387	Histidine kinase-like ATPases
SUTH_RS18465	SM00388	His Kinase A (phosphoacceptor) domain
SUTH_RS18465	SM00448	cheY-homologous receiver domain
SUTH_RS18475	SM00091	PAS domain
SUTH_RS18475	SM00387	Histidine kinase-like ATPases
SUTH_RS18485	SM00052	Putative diguanylate phosphodiesterase
SUTH_RS18485	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SUTH_RS18485	SM00091	PAS domain
SUTH_RS18485	SM00267	diguanylate cyclase
SUTH_RS18485	SM01079	SUTH_RS18485
SUTH_RS18495	SM00052	Putative diguanylate phosphodiesterase
SUTH_RS18495	SM00091	PAS domain
SUTH_RS18495	SM00267	diguanylate cyclase
SUTH_RS18495	SM01079	SUTH_RS18495
SUTH_RS18500	SM00100	Cyclic nucleotide-monophosphate binding domain
SUTH_RS18515	SM00240	Forkhead associated domain
SUTH_RS18520	SM00100	Cyclic nucleotide-monophosphate binding domain
SUTH_RS18525	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SUTH_RS18525	SM00091	PAS domain
SUTH_RS18525	SM00387	Histidine kinase-like ATPases
SUTH_RS18525	SM00388	His Kinase A (phosphoacceptor) domain
SUTH_RS18525	SM00448	cheY-homologous receiver domain
SUTH_RS18530	SM00671	Sel1-like repeats.
SUTH_RS18540	SM00028	Tetratricopeptide repeats
SUTH_RS18555	SM00073	Histidine Phosphotransfer domain
SUTH_RS18555	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SUTH_RS18555	SM00091	PAS domain
SUTH_RS18555	SM00387	Histidine kinase-like ATPases
SUTH_RS18555	SM00388	His Kinase A (phosphoacceptor) domain
SUTH_RS18555	SM00448	cheY-homologous receiver domain
SUTH_RS18565	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SUTH_RS18565	SM00091	PAS domain
SUTH_RS18570	SM00091	PAS domain
SUTH_RS18570	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SUTH_RS18575	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SUTH_RS18575	SM00091	PAS domain
SUTH_RS18575	SM00387	Histidine kinase-like ATPases
SUTH_RS18575	SM00388	His Kinase A (phosphoacceptor) domain
SUTH_RS18575	SM00448	cheY-homologous receiver domain
SUTH_RS18585	SM00115	Caspase, interleukin-1 beta converting enzyme (ICE) homologues
SUTH_RS18590	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SUTH_RS18590	SM00091	PAS domain
SUTH_RS18590	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SUTH_RS18590	SM00387	Histidine kinase-like ATPases
SUTH_RS18590	SM00388	His Kinase A (phosphoacceptor) domain
SUTH_RS18590	SM00448	cheY-homologous receiver domain
SUTH_RS18595	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SUTH_RS18595	SM00387	Histidine kinase-like ATPases
SUTH_RS18595	SM00388	His Kinase A (phosphoacceptor) domain
SUTH_RS18595	SM00448	cheY-homologous receiver domain
SUTH_RS18600	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SUTH_RS18600	SM00091	PAS domain
SUTH_RS18600	SM00267	diguanylate cyclase
SUTH_RS18620	SM00028	Tetratricopeptide repeats
SUTH_RS18625	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SUTH_RS18625	SM00387	Histidine kinase-like ATPases
SUTH_RS18625	SM00388	His Kinase A (phosphoacceptor) domain
SUTH_RS18625	SM01079	SUTH_RS18625
SUTH_RS18630	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SUTH_RS18630	SM00091	PAS domain
SUTH_RS18630	SM00387	Histidine kinase-like ATPases
SUTH_RS18630	SM00388	His Kinase A (phosphoacceptor) domain
SUTH_RS18630	SM00448	cheY-homologous receiver domain
SUTH_RS18655	SM00115	Caspase, interleukin-1 beta converting enzyme (ICE) homologues
SUTH_RS18655	SM00671	Sel1-like repeats.
SUTH_RS18665	SM00387	Histidine kinase-like ATPases
SUTH_RS18685	SM00387	Histidine kinase-like ATPases
SUTH_RS18685	SM00388	His Kinase A (phosphoacceptor) domain
SUTH_RS18690	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
SUTH_RS18690	SM01080	SUTH_RS18690
SUTH_RS18695	SM00115	Caspase, interleukin-1 beta converting enzyme (ICE) homologues
SUTH_RS18700	SM00267	diguanylate cyclase
SUTH_RS18710	SM00100	Cyclic nucleotide-monophosphate binding domain
SUTH_RS18735	SM00912	haemagglutination activity domain
