locus-tag class description EL388_RS00005 PF00308 Bacterial dnaA protein EL388_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix EL388_RS00005 PF11638 DnaA N-terminal domain EL388_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain EL388_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain EL388_RS00010 PF02767 DNA polymerase III beta subunit, central domain EL388_RS00015 PF00986 DNA gyrase B subunit, carboxyl terminus EL388_RS00015 PF18053 DNA gyrase B subunit insert domain EL388_RS00015 PF01751 Toprim domain EL388_RS00015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EL388_RS00015 PF00204 DNA gyrase B EL388_RS00060 PF02316 Mu DNA-binding domain EL388_RS00060 PF09039 Mu DNA binding, I gamma subdomain EL388_RS00060 PF09299 Mu transposase, C-terminal EL388_RS00060 PF02914 Bacteriophage Mu transposase EL388_RS00070 PF09077 Mu B transposition protein, C terminal EL388_RS00070 PF13401 AAA domain EL388_RS00245 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 EL388_RS00255 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD EL388_RS00260 PF13686 DsrE/DsrF/DrsH-like family EL388_RS00265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EL388_RS00265 PF03466 LysR substrate binding domain EL388_RS00270 PF10417 C-terminal domain of 1-Cys peroxiredoxin EL388_RS00270 PF00578 AhpC/TSA family EL388_RS00280 PF13368 Topoisomerase C-terminal repeat EL388_RS00280 PF01751 Toprim domain EL388_RS00280 PF01131 DNA topoisomerase EL388_RS00285 PF04361 Protein of unknown function (DUF494) EL388_RS00290 PF02481 DNA recombination-mediator protein A EL388_RS00290 PF17782 DprA winged helix domain EL388_RS00300 PF01327 Polypeptide deformylase EL388_RS00305 PF00551 Formyl transferase EL388_RS00305 PF02911 Formyl transferase, C-terminal domain EL388_RS00310 PF01435 Peptidase family M48 EL388_RS00315 PF01029 NusB family EL388_RS00315 PF01189 16S rRNA methyltransferase RsmB/F EL388_RS00325 PF00512 His Kinase A (phospho-acceptor) domain EL388_RS00325 PF00989 PAS fold EL388_RS00325 PF00672 HAMP domain EL388_RS00325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EL388_RS00330 PF02954 Bacterial regulatory protein, Fis family EL388_RS00330 PF00158 Sigma-54 interaction domain EL388_RS00330 PF00072 Response regulator receiver domain EL388_RS00335 PF02254 TrkA-N domain EL388_RS00335 PF02080 TrkA-C domain EL388_RS00340 PF02386 Cation transport protein EL388_RS00350 PF04362 Bacterial Fe(2+) trafficking EL388_RS00355 PF01209 ubiE/COQ5 methyltransferase family EL388_RS00360 PF01272 Transcription elongation factor, GreA/GreB, C-term EL388_RS00360 PF03449 Transcription elongation factor, N-terminal EL388_RS00365 PF04333 MlaA lipoprotein EL388_RS00405 PF00873 AcrB/AcrD/AcrF family EL388_RS00410 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EL388_RS00410 PF00529 HlyD membrane-fusion protein of T1SS EL388_RS00515 PF06074 Protein of unknown function (DUF935) EL388_RS00535 PF05069 Phage virion morphogenesis family EL388_RS00545 PF10124 Mu-like prophage major head subunit gpT EL388_RS00635 PF00529 HlyD membrane-fusion protein of T1SS EL388_RS00635 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EL388_RS00650 PF00072 Response regulator receiver domain EL388_RS00650 PF00196 Bacterial regulatory proteins, luxR family EL388_RS00655 PF01323 DSBA-like thioredoxin domain EL388_RS00665 PF00750 tRNA synthetases class I (R) EL388_RS00665 PF03485 Arginyl tRNA synthetase N terminal domain EL388_RS00665 PF05746 DALR anticodon binding domain EL388_RS00670 PF00270 DEAD/DEAH box helicase EL388_RS00670 PF18319 PriA DNA helicase Cys-rich region (CRR) domain EL388_RS00670 PF18074 Primosomal protein N C-terminal domain EL388_RS00670 PF17764 3′ DNA-binding domain (3′BD) EL388_RS00670 PF00271 Helicase conserved C-terminal domain EL388_RS00690 PF00114 Pilin (bacterial filament) EL388_RS00690 PF07963 Prokaryotic N-terminal methylation motif EL388_RS00695 PF12705 PD-(D/E)XK nuclease superfamily EL388_RS00695 PF00580 UvrD/REP helicase N-terminal domain EL388_RS00695 PF13361 UvrD-like helicase C-terminal domain EL388_RS00700 PF01960 ArgJ family EL388_RS00715 PF00293 NUDIX domain EL388_RS00725 PF01895 PhoU domain EL388_RS00730 PF04314 Copper chaperone PCu(A)C EL388_RS00735 PF00989 PAS fold EL388_RS00735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EL388_RS00735 PF00512 His Kinase A (phospho-acceptor) domain EL388_RS00740 PF00072 Response regulator receiver domain EL388_RS00745 PF00227 Proteasome subunit EL388_RS00770 PF01809 Putative membrane protein insertion efficiency factor EL388_RS00780 PF01258 Prokaryotic dksA/traR C4-type zinc finger EL388_RS00785 PF02492 CobW/HypB/UreG, nucleotide-binding domain EL388_RS00785 PF07683 Cobalamin synthesis protein cobW C-terminal domain EL388_RS00790 PF04055 Radical SAM superfamily EL388_RS00790 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family EL388_RS00795 PF03992 Antibiotic biosynthesis monooxygenase EL388_RS00800 PF02875 Mur ligase family, glutamate ligase domain EL388_RS00800 PF08245 Mur ligase middle domain EL388_RS00800 PF01225 Mur ligase family, catalytic domain EL388_RS00805 PF02405 Permease MlaE EL388_RS00810 PF00005 ABC transporter EL388_RS00825 PF05728 Uncharacterised protein family (UPF0227) EL388_RS00830 PF17876 Cold shock domain EL388_RS00830 PF00773 RNB domain EL388_RS00830 PF08206 Ribonuclease B OB domain EL388_RS00840 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain EL388_RS00850 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA EL388_RS00870 PF05175 Methyltransferase small domain EL388_RS00870 PF17827 PrmC N-terminal domain EL388_RS00875 PF13847 Methyltransferase domain EL388_RS00875 PF10119 Predicted methyltransferase regulatory domain EL388_RS00880 PF00313 'Cold-shock' DNA-binding domain EL388_RS00885 PF01176 Translation initiation factor 1A / IF-1 EL388_RS00900 PF03462 PCRF domain EL388_RS00900 PF00472 RF-1 domain EL388_RS00905 PF01488 Shikimate / quinate 5-dehydrogenase EL388_RS00905 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain EL388_RS00905 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain EL388_RS00915 PF01218 Coproporphyrinogen III oxidase EL388_RS00935 PF12801 4Fe-4S binding domain EL388_RS00945 PF01618 MotA/TolQ/ExbB proton channel family EL388_RS00950 PF02472 Biopolymer transport protein ExbD/TolR EL388_RS00960 PF01300 Telomere recombination EL388_RS00965 PF02844 Phosphoribosylglycinamide synthetase, N domain EL388_RS00965 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain EL388_RS00965 PF02843 Phosphoribosylglycinamide synthetase, C domain EL388_RS00970 PF02142 MGS-like domain EL388_RS00970 PF01808 AICARFT/IMPCHase bienzyme EL388_RS00975 PF02954 Bacterial regulatory protein, Fis family EL388_RS00980 PF01207 Dihydrouridine synthase (Dus) EL388_RS00985 PF00795 Carbon-nitrogen hydrolase EL388_RS00995 PF00586 AIR synthase related protein, N-terminal domain EL388_RS00995 PF02769 AIR synthase related protein, C-terminal domain EL388_RS01005 PF01467 Cytidylyltransferase-like EL388_RS01010 PF00171 Aldehyde dehydrogenase family EL388_RS01015 PF14840 Processivity clamp loader gamma complex DNA pol III C-term EL388_RS01015 PF06144 DNA polymerase III, delta subunit EL388_RS01025 PF08264 Anticodon-binding domain of tRNA EL388_RS01025 PF00133 tRNA synthetases class I (I, L, M and V) EL388_RS01025 PF13603 Leucyl-tRNA synthetase, Domain 2 EL388_RS01025 PF09334 tRNA synthetases class I (M) EL388_RS01030 PF00485 Phosphoribulokinase / Uridine kinase family EL388_RS01035 PF04324 BFD-like [2Fe-2S] binding domain EL388_RS01035 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain EL388_RS01035 PF07992 Pyridine nucleotide-disulphide oxidoreductase EL388_RS01035 PF01077 Nitrite and sulphite reductase 4Fe-4S domain EL388_RS01035 PF18267 Rubredoxin NAD+ reductase C-terminal domain EL388_RS01040 PF00355 Rieske [2Fe-2S] domain EL388_RS01045 PF04879 Molybdopterin oxidoreductase Fe4S4 domain EL388_RS01045 PF04324 BFD-like [2Fe-2S] binding domain EL388_RS01045 PF01568 Molydopterin dinucleotide binding domain EL388_RS01045 PF00384 Molybdopterin oxidoreductase EL388_RS01060 PF00528 Binding-protein-dependent transport system inner membrane component EL388_RS01065 PF00005 ABC transporter EL388_RS01070 PF00672 HAMP domain EL388_RS01070 PF02743 Cache domain EL388_RS01070 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EL388_RS01080 PF13361 UvrD-like helicase C-terminal domain EL388_RS01080 PF00580 UvrD/REP helicase N-terminal domain EL388_RS01085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EL388_RS01085 PF00512 His Kinase A (phospho-acceptor) domain EL388_RS01085 PF00989 PAS fold EL388_RS01120 PF12804 MobA-like NTP transferase domain EL388_RS01130 PF01197 Ribosomal protein L31 EL388_RS01135 PF03881 Fructosamine kinase EL388_RS01150 PF13442 Cytochrome C oxidase, cbb3-type, subunit III EL388_RS01155 PF00580 UvrD/REP helicase N-terminal domain EL388_RS01155 PF13361 UvrD-like helicase C-terminal domain EL388_RS01160 PF00149 Calcineurin-like phosphoesterase EL388_RS01180 PF00294 pfkB family carbohydrate kinase EL388_RS01195 PF05683 Fumarase C-terminus EL388_RS01195 PF05681 Fumarate hydratase (Fumerase) EL388_RS01205 PF01145 SPFH domain / Band 7 family EL388_RS01210 PF00768 D-alanyl-D-alanine carboxypeptidase EL388_RS01215 PF00005 ABC transporter EL388_RS01220 PF03379 CcmB protein EL388_RS01225 PF01578 Cytochrome C assembly protein EL388_RS01230 PF04995 Heme exporter protein D (CcmD) EL388_RS01235 PF03100 CcmE EL388_RS01245 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal EL388_RS01245 PF01578 Cytochrome C assembly protein EL388_RS01250 PF08534 Redoxin EL388_RS01255 PF03918 Cytochrome C biogenesis protein EL388_RS01265 PF03976 Polyphosphate kinase 2 (PPK2) EL388_RS01275 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EL388_RS01275 PF00529 HlyD membrane-fusion protein of T1SS EL388_RS01280 PF00873 AcrB/AcrD/AcrF family EL388_RS01285 PF02321 Outer membrane efflux protein EL388_RS01295 PF01171 PP-loop family EL388_RS01300 PF00578 AhpC/TSA family EL388_RS01305 PF11412 Disulphide bond corrector protein DsbC EL388_RS01305 PF02683 Cytochrome C biogenesis protein transmembrane region EL388_RS01310 PF03091 CutA1 divalent ion tolerance protein EL388_RS01320 PF01594 AI-2E family transporter EL388_RS01325 PF02769 AIR synthase related protein, C-terminal domain EL388_RS01325 PF00586 AIR synthase related protein, N-terminal domain EL388_RS01330 PF00551 Formyl transferase EL388_RS01340 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain EL388_RS01340 PF02222 ATP-grasp domain EL388_RS01345 PF00731 AIR carboxylase EL388_RS01350 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EL388_RS01350 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EL388_RS01350 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EL388_RS01350 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EL388_RS01360 PF04055 Radical SAM superfamily EL388_RS01360 PF06969 HemN C-terminal domain EL388_RS01370 PF01063 Amino-transferase class IV EL388_RS01380 PF04542 Sigma-70 region 2 EL388_RS01380 PF08281 Sigma-70, region 4 EL388_RS01390 PF00072 Response regulator receiver domain EL388_RS01395 PF08335 GlnD PII-uridylyltransferase EL388_RS01395 PF03710 Glutamate-ammonia ligase adenylyltransferase EL388_RS01400 PF13193 AMP-binding enzyme C-terminal domain EL388_RS01400 PF00501 AMP-binding enzyme EL388_RS01400 PF16177 Acetyl-coenzyme A synthetase N-terminus EL388_RS01410 PF00437 Type II/IV secretion system protein EL388_RS01430 PF13426 PAS domain EL388_RS01430 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EL388_RS01430 PF08447 PAS fold EL388_RS01435 PF00293 NUDIX domain EL388_RS01440 PF00291 Pyridoxal-phosphate dependent enzyme EL388_RS01445 PF01741 Large-conductance mechanosensitive channel, MscL EL388_RS01455 PF02445 Quinolinate synthetase A protein EL388_RS01460 PF00308 Bacterial dnaA protein EL388_RS01470 PF00085 Thioredoxin EL388_RS01475 PF04344 Chemotaxis phosphatase, CheZ EL388_RS01480 PF00174 Oxidoreductase molybdopterin binding domain EL388_RS01485 PF01794 Ferric reductase like transmembrane component EL388_RS01495 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain EL388_RS01495 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain EL388_RS01505 PF01491 Frataxin-like domain EL388_RS01510 PF14698 Argininosuccinate lyase C-terminal EL388_RS01510 PF00206 Lyase EL388_RS01520 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain EL388_RS01520 PF03900 Porphobilinogen deaminase, C-terminal domain EL388_RS01525 PF02602 Uroporphyrinogen-III synthase HemD EL388_RS01530 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase EL388_RS01545 PF00970 Oxidoreductase FAD-binding domain EL388_RS01545 PF00175 Oxidoreductase NAD-binding domain EL388_RS01545 PF00111 2Fe-2S iron-sulfur cluster binding domain EL388_RS01560 PF02622 Uncharacterized ACR, COG1678 EL388_RS01565 PF03652 Holliday junction resolvase EL388_RS01570 PF00156 Phosphoribosyl transferase domain EL388_RS01575 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain EL388_RS01575 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain EL388_RS01580 PF01979 Amidohydrolase family EL388_RS01585 PF05362 Lon protease (S16) C-terminal proteolytic domain EL388_RS01585 PF13654 AAA domain EL388_RS01605 PF00571 CBS domain EL388_RS01615 PF03435 Saccharopine dehydrogenase NADP binding domain EL388_RS01615 PF16653 Saccharopine dehydrogenase C-terminal domain EL388_RS01620 PF01061 ABC-2 type transporter EL388_RS01625 PF00005 ABC transporter EL388_RS01645 PF01761 3-dehydroquinate synthase EL388_RS01650 PF13286 Phosphohydrolase-associated domain EL388_RS01650 PF01966 HD domain EL388_RS01655 PF00156 Phosphoribosyl transferase domain EL388_RS01665 PF06968 Biotin and Thiamin Synthesis associated domain EL388_RS01665 PF04055 Radical SAM superfamily EL388_RS01670 PF00155 Aminotransferase class I and II EL388_RS01675 PF00561 alpha/beta hydrolase fold EL388_RS01680 PF08241 Methyltransferase domain EL388_RS01690 PF02790 Cytochrome C oxidase subunit II, transmembrane domain EL388_RS01690 PF00116 Cytochrome C oxidase subunit II, periplasmic domain EL388_RS01695 PF00115 Cytochrome C and Quinol oxidase polypeptide I EL388_RS01700 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 EL388_RS01710 PF00510 Cytochrome c oxidase subunit III EL388_RS01730 PF01040 UbiA prenyltransferase family EL388_RS01735 PF02082 Transcriptional regulator EL388_RS01740 PF02630 SCO1/SenC EL388_RS01745 PF00115 Cytochrome C and Quinol oxidase polypeptide I EL388_RS01760 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP EL388_RS01760 PF13442 Cytochrome C oxidase, cbb3-type, subunit III EL388_RS01765 PF12801 4Fe-4S binding domain EL388_RS01765 PF13746 4Fe-4S dicluster domain EL388_RS01765 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase EL388_RS01780 PF00990 Diguanylate cyclase, GGDEF domain EL388_RS01780 PF03707 Bacterial signalling protein N terminal repeat EL388_RS01780 PF00563 EAL domain EL388_RS01785 PF09335 SNARE associated Golgi protein EL388_RS01790 PF07549 SecD/SecF GG Motif EL388_RS01790 PF02355 Protein export membrane protein EL388_RS01795 PF07549 SecD/SecF GG Motif EL388_RS01795 PF13721 SecD export protein N-terminal TM region EL388_RS01795 PF02355 Protein export membrane protein EL388_RS01800 PF02699 Preprotein translocase subunit EL388_RS01805 PF01702 Queuine tRNA-ribosyltransferase EL388_RS01810 PF02547 Queuosine biosynthesis protein EL388_RS01820 PF00881 Nitroreductase family EL388_RS01825 PF01648 4'-phosphopantetheinyl transferase superfamily EL388_RS01830 PF00933 Glycosyl hydrolase family 3 N terminal domain EL388_RS01835 PF01545 Cation efflux family EL388_RS01845 PF03167 Uracil DNA glycosylase superfamily EL388_RS01850 PF01361 Tautomerase enzyme EL388_RS01860 PF08459 UvrC Helix-hairpin-helix N-terminal EL388_RS01860 PF02151 UvrB/uvrC motif EL388_RS01860 PF01541 GIY-YIG catalytic domain EL388_RS01865 PF01066 CDP-alcohol phosphatidyltransferase EL388_RS01885 PF02576 RimP N-terminal domain EL388_RS01885 PF17384 RimP C-terminal SH3 domain EL388_RS01890 PF08529 NusA N-terminal domain EL388_RS01890 PF13184 NusA-like KH domain EL388_RS01895 PF11987 Translation-initiation factor 2 EL388_RS01895 PF04760 Translation initiation factor IF-2, N-terminal region EL388_RS01895 PF00009 Elongation factor Tu GTP binding domain EL388_RS01895 PF08364 Bacterial translation initiation factor IF-2 associated region EL388_RS01900 PF02033 Ribosome-binding factor A EL388_RS01905 PF09157 Pseudouridine synthase II TruB, C-terminal EL388_RS01905 PF01509 TruB family pseudouridylate synthase (N terminal domain) EL388_RS01905 PF16198 tRNA pseudouridylate synthase B C-terminal domain EL388_RS01910 PF00312 Ribosomal protein S15 EL388_RS01915 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain EL388_RS01915 PF00575 S1 RNA binding domain EL388_RS01915 PF01138 3' exoribonuclease family, domain 1 EL388_RS01915 PF03725 3' exoribonuclease family, domain 2 EL388_RS01915 PF00013 KH domain EL388_RS01925 PF13419 Haloacid dehalogenase-like hydrolase EL388_RS01930 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain EL388_RS01930 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain EL388_RS01950 PF02896 PEP-utilising enzyme, TIM barrel domain EL388_RS01950 PF00391 PEP-utilising enzyme, mobile domain EL388_RS01950 PF05524 PEP-utilising enzyme, N-terminal EL388_RS01955 PF01161 Phosphatidylethanolamine-binding protein EL388_RS01965 PF01464 Transglycosylase SLT domain EL388_RS01965 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain EL388_RS01970 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EL388_RS01970 PF04073 Aminoacyl-tRNA editing domain EL388_RS01970 PF03129 Anticodon binding domain EL388_RS01980 PF00293 NUDIX domain EL388_RS01995 PF10609 NUBPL iron-transfer P-loop NTPase EL388_RS02000 PF00692 dUTPase EL388_RS02005 PF01276 Orn/Lys/Arg decarboxylase, major domain EL388_RS02005 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain EL388_RS02005 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain EL388_RS02010 PF01250 Ribosomal protein S6 EL388_RS02020 PF01084 Ribosomal protein S18 EL388_RS02025 PF01281 Ribosomal protein L9, N-terminal domain EL388_RS02025 PF03948 Ribosomal protein L9, C-terminal domain EL388_RS02030 PF03796 DnaB-like helicase C terminal domain EL388_RS02030 PF00772 DnaB-like helicase N terminal domain EL388_RS02040 PF00842 Alanine racemase, C-terminal domain EL388_RS02040 PF01168 Alanine racemase, N-terminal domain EL388_RS02045 PF00218 Indole-3-glycerol phosphate synthase EL388_RS02055 PF13609 Gram-negative porin EL388_RS02075 PF10531 SLBB domain EL388_RS02080 PF04542 Sigma-70 region 2 EL388_RS02080 PF00140 Sigma-70 factor, region 1.2 EL388_RS02080 PF04545 Sigma-70, region 4 EL388_RS02085 PF18075 FtsX extracellular domain EL388_RS02090 PF00005 ABC transporter EL388_RS02095 PF02881 SRP54-type protein, helical bundle domain EL388_RS02095 PF00448 SRP54-type protein, GTPase domain EL388_RS02100 PF00675 Insulinase (Peptidase family M16) EL388_RS02100 PF05193 Peptidase M16 inactive domain EL388_RS02105 PF00675 Insulinase (Peptidase family M16) EL388_RS02105 PF05193 Peptidase M16 inactive domain EL388_RS02115 PF01467 Cytidylyltransferase-like EL388_RS02120 PF00037 4Fe-4S binding domain EL388_RS02125 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain EL388_RS02125 PF06827 Zinc finger found in FPG and IleRS EL388_RS02125 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain EL388_RS02135 PF03550 Outer membrane lipoprotein LolB EL388_RS02140 PF08544 GHMP kinases C terminal EL388_RS02140 PF00288 GHMP kinases N terminal domain EL388_RS02150 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase EL388_RS02150 PF14572 Phosphoribosyl synthetase-associated domain EL388_RS02155 PF01386 Ribosomal L25p family EL388_RS02155 PF14693 Ribosomal protein TL5, C-terminal domain EL388_RS02160 PF01195 Peptidyl-tRNA hydrolase EL388_RS02165 PF01926 50S ribosome-binding GTPase EL388_RS02165 PF06071 Protein of unknown function (DUF933) EL388_RS02215 PF03143 Elongation factor Tu C-terminal domain EL388_RS02215 PF00009 Elongation factor Tu GTP binding domain EL388_RS02215 PF03144 Elongation factor Tu domain 2 EL388_RS02225 PF00584 SecE/Sec61-gamma subunits of protein translocation complex EL388_RS02230 PF00467 KOW motif EL388_RS02230 PF02357 Transcription termination factor nusG EL388_RS02235 PF03946 Ribosomal protein L11, N-terminal domain EL388_RS02235 PF00298 Ribosomal protein L11, RNA binding domain EL388_RS02240 PF00687 Ribosomal protein L1p/L10e family EL388_RS02245 PF00466 Ribosomal protein L10 EL388_RS02250 PF16320 Ribosomal protein L7/L12 dimerisation domain EL388_RS02250 PF00542 Ribosomal protein L7/L12 C-terminal domain EL388_RS02260 PF04563 RNA polymerase beta subunit EL388_RS02260 PF04561 RNA polymerase Rpb2, domain 2 EL388_RS02260 PF04565 RNA polymerase Rpb2, domain 3 EL388_RS02260 PF10385 RNA polymerase beta subunit external 1 domain EL388_RS02260 PF00562 RNA polymerase Rpb2, domain 6 EL388_RS02260 PF04560 RNA polymerase Rpb2, domain 7 EL388_RS02265 PF04998 RNA polymerase Rpb1, domain 5 EL388_RS02265 PF05000 RNA polymerase Rpb1, domain 4 EL388_RS02265 PF04983 RNA polymerase Rpb1, domain 3 EL388_RS02265 PF04997 RNA polymerase Rpb1, domain 1 EL388_RS02265 PF00623 RNA polymerase Rpb1, domain 2 EL388_RS02270 PF00164 Ribosomal protein S12/S23 EL388_RS02275 PF00177 Ribosomal protein S7p/S5e EL388_RS02280 PF00009 Elongation factor Tu GTP binding domain EL388_RS02280 PF03764 Elongation factor G, domain IV EL388_RS02280 PF14492 Elongation Factor G, domain II EL388_RS02280 PF00679 Elongation factor G C-terminus EL388_RS02280 PF03144 Elongation factor Tu domain 2 EL388_RS02285 PF03143 Elongation factor Tu C-terminal domain EL388_RS02285 PF03144 Elongation factor Tu domain 2 EL388_RS02285 PF00009 Elongation factor Tu GTP binding domain EL388_RS02290 PF00338 Ribosomal protein S10p/S20e EL388_RS02295 PF00297 Ribosomal protein L3 EL388_RS02300 PF00573 Ribosomal protein L4/L1 family EL388_RS02305 PF00276 Ribosomal protein L23 EL388_RS02310 PF03947 Ribosomal Proteins L2, C-terminal domain EL388_RS02310 PF00181 Ribosomal Proteins L2, RNA binding domain EL388_RS02315 PF00203 Ribosomal protein S19 EL388_RS02320 PF00237 Ribosomal protein L22p/L17e EL388_RS02325 PF07650 KH domain EL388_RS02325 PF00189 Ribosomal protein S3, C-terminal domain EL388_RS02330 PF00252 Ribosomal protein L16p/L10e EL388_RS02335 PF00831 Ribosomal L29 protein EL388_RS02340 PF00366 Ribosomal protein S17 EL388_RS02345 PF00238 Ribosomal protein L14p/L23e EL388_RS02350 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 EL388_RS02355 PF00281 Ribosomal protein L5 EL388_RS02355 PF00673 ribosomal L5P family C-terminus EL388_RS02360 PF00253 Ribosomal protein S14p/S29e EL388_RS02365 PF00410 Ribosomal protein S8 EL388_RS02370 PF00347 Ribosomal protein L6 EL388_RS02375 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast EL388_RS02380 PF03719 Ribosomal protein S5, C-terminal domain EL388_RS02380 PF00333 Ribosomal protein S5, N-terminal domain EL388_RS02385 PF00327 Ribosomal protein L30p/L7e EL388_RS02390 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A EL388_RS02395 PF00344 SecY translocase EL388_RS02400 PF01176 Translation initiation factor 1A / IF-1 EL388_RS02405 PF00444 Ribosomal protein L36 EL388_RS02410 PF00416 Ribosomal protein S13/S18 EL388_RS02415 PF00411 Ribosomal protein S11 EL388_RS02420 PF01479 S4 domain EL388_RS02420 PF00163 Ribosomal protein S4/S9 N-terminal domain EL388_RS02425 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain EL388_RS02425 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain EL388_RS02425 PF01000 RNA polymerase Rpb3/RpoA insert domain EL388_RS02430 PF01196 Ribosomal protein L17 EL388_RS02440 PF00849 RNA pseudouridylate synthase EL388_RS02440 PF01479 S4 domain EL388_RS02450 PF17760 UvrA interaction domain EL388_RS02450 PF17755 UvrA DNA-binding domain EL388_RS02460 PF00593 TonB dependent receptor EL388_RS02460 PF07715 TonB-dependent Receptor Plug Domain EL388_RS02465 PF07690 Major Facilitator Superfamily EL388_RS02470 PF00436 Single-strand binding protein family EL388_RS02475 PF00072 Response regulator receiver domain EL388_RS02475 PF00196 Bacterial regulatory proteins, luxR family EL388_RS02480 PF01627 Hpt domain EL388_RS02480 PF00512 His Kinase A (phospho-acceptor) domain EL388_RS02480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EL388_RS02480 PF00672 HAMP domain EL388_RS02480 PF00072 Response regulator receiver domain EL388_RS02485 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) EL388_RS02490 PF00501 AMP-binding enzyme EL388_RS02490 PF13193 AMP-binding enzyme C-terminal domain EL388_RS02490 PF01553 Acyltransferase EL388_RS02495 PF00593 TonB dependent receptor EL388_RS02495 PF07715 TonB-dependent Receptor Plug Domain EL388_RS02510 PF01336 OB-fold nucleic acid binding domain EL388_RS02510 PF00152 tRNA synthetases class II (D, K and N) EL388_RS02510 PF02938 GAD domain EL388_RS02520 PF01661 Macro domain EL388_RS02530 PF03372 Endonuclease/Exonuclease/phosphatase family EL388_RS02535 PF13091 PLD-like domain EL388_RS02545 PF05872 Bacterial protein of unknown function (DUF853) EL388_RS02550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EL388_RS02550 PF03466 LysR substrate binding domain EL388_RS02555 PF01292 Prokaryotic cytochrome b561 EL388_RS02570 PF17954 Quercetinase C-terminal cupin domain EL388_RS02570 PF02678 Pirin EL388_RS02575 PF03358 NADPH-dependent FMN reductase EL388_RS02580 PF01709 Transcriptional regulator EL388_RS02590 PF02075 Crossover junction endodeoxyribonuclease RuvC EL388_RS02595 PF01330 RuvA N terminal domain EL388_RS02595 PF07499 RuvA, C-terminal domain EL388_RS02600 PF17864 RuvB AAA lid domain EL388_RS02600 PF05491 RuvB C-terminal winged helix domain EL388_RS02600 PF05496 Holliday junction DNA helicase RuvB P-loop domain EL388_RS02605 PF03061 Thioesterase superfamily EL388_RS02610 PF01618 MotA/TolQ/ExbB proton channel family EL388_RS02615 PF02472 Biopolymer transport protein ExbD/TolR EL388_RS02630 PF07676 WD40-like Beta Propeller Repeat EL388_RS02630 PF04052 TolB amino-terminal domain EL388_RS02635 PF00691 OmpA family EL388_RS02645 PF04055 Radical SAM superfamily EL388_RS02650 PF06508 Queuosine biosynthesis protein QueC EL388_RS02670 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EL388_RS02670 PF00205 Thiamine pyrophosphate enzyme, central domain EL388_RS02670 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain EL388_RS02675 PF10369 Small subunit of acetolactate synthase EL388_RS02680 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain EL388_RS02680 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain EL388_RS02685 PF02666 Phosphatidylserine decarboxylase EL388_RS02690 PF01066 CDP-alcohol phosphatidyltransferase EL388_RS02695 PF00682 HMGL-like EL388_RS02695 PF08502 LeuA allosteric (dimerisation) domain EL388_RS02715 PF03358 NADPH-dependent FMN reductase EL388_RS02720 PF08442 ATP-grasp domain EL388_RS02720 PF00549 CoA-ligase EL388_RS02725 PF02629 CoA binding domain EL388_RS02725 PF00549 CoA-ligase EL388_RS02730 PF00005 ABC transporter EL388_RS02735 PF04364 DNA polymerase III chi subunit, HolC EL388_RS02745 PF10458 Valyl tRNA synthetase tRNA binding arm EL388_RS02745 PF00133 tRNA synthetases class I (I, L, M and V) EL388_RS02745 PF08264 Anticodon-binding domain of tRNA EL388_RS02755 PF02391 MoaE protein EL388_RS02760 PF02597 ThiS family EL388_RS02765 PF03453 MoeA N-terminal region (domain I and II) EL388_RS02765 PF03454 MoeA C-terminal region (domain IV) EL388_RS02765 PF00994 Probable molybdopterin binding domain EL388_RS02770 PF03205 Molybdopterin guanine dinucleotide synthesis protein B EL388_RS02775 PF04055 Radical SAM superfamily EL388_RS02775 PF06463 Molybdenum Cofactor Synthesis C EL388_RS02790 PF02685 Glucokinase EL388_RS02795 PF00990 Diguanylate cyclase, GGDEF domain EL388_RS02795 PF08448 PAS fold EL388_RS02795 PF13426 PAS domain EL388_RS02795 PF08447 PAS fold EL388_RS02795 PF00563 EAL domain EL388_RS02795 PF05231 MASE1 EL388_RS02805 PF00117 Glutamine amidotransferase class-I EL388_RS02805 PF00958 GMP synthase C terminal domain EL388_RS02810 PF02649 Type I GTP cyclohydrolase folE2 EL388_RS02815 PF02779 Transketolase, pyrimidine binding domain EL388_RS02815 PF02780 Transketolase, C-terminal domain EL388_RS02815 PF13292 1-deoxy-D-xylulose-5-phosphate synthase EL388_RS02820 PF00348 Polyprenyl synthetase EL388_RS02825 PF02609 Exonuclease VII small subunit EL388_RS02830 PF00848 Ring hydroxylating alpha subunit (catalytic domain) EL388_RS02830 PF00355 Rieske [2Fe-2S] domain EL388_RS02840 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain EL388_RS02840 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain EL388_RS02845 PF02899 Phage integrase, N-terminal SAM-like domain EL388_RS02845 PF00589 Phage integrase family EL388_RS02855 PF02152 Dihydroneopterin aldolase EL388_RS02860 PF02660 Glycerol-3-phosphate acyltransferase EL388_RS02875 PF00814 Glycoprotease family EL388_RS02880 PF01165 Ribosomal protein S21 EL388_RS02890 PF08278 DNA primase DnaG DnaB-binding EL388_RS02890 PF10410 DnaB-helicase binding domain of primase EL388_RS02890 PF08275 DNA primase catalytic core, N-terminal domain EL388_RS02890 PF01807 CHC2 zinc finger EL388_RS02895 PF04539 Sigma-70 region 3 EL388_RS02895 PF04546 Sigma-70, non-essential region EL388_RS02895 PF03979 Sigma-70 factor, region 1.1 EL388_RS02895 PF00140 Sigma-70 factor, region 1.2 EL388_RS02895 PF04545 Sigma-70, region 4 EL388_RS02895 PF04542 Sigma-70 region 2 EL388_RS02905 PF00512 His Kinase A (phospho-acceptor) domain EL388_RS02905 PF00672 HAMP domain EL388_RS02905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EL388_RS02920 PF00672 HAMP domain EL388_RS02920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EL388_RS02920 PF17200 Single Cache domain 2 EL388_RS02925 PF04055 Radical SAM superfamily EL388_RS02930 PF00563 EAL domain EL388_RS02930 PF00990 Diguanylate cyclase, GGDEF domain EL388_RS02930 PF03707 Bacterial signalling protein N terminal repeat EL388_RS02935 PF01245 Ribosomal protein L19 EL388_RS02940 PF01746 tRNA (Guanine-1)-methyltransferase EL388_RS02945 PF01782 RimM N-terminal domain EL388_RS02945 PF05239 PRC-barrel domain EL388_RS02950 PF00886 Ribosomal protein S16 EL388_RS02955 PF02978 Signal peptide binding domain EL388_RS02955 PF00448 SRP54-type protein, GTPase domain EL388_RS02955 PF02881 SRP54-type protein, helical bundle domain EL388_RS02960 PF01578 Cytochrome C assembly protein EL388_RS02965 PF02401 LytB protein EL388_RS02970 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EL388_RS02975 PF01252 Signal peptidase (SPase) II EL388_RS02980 PF00133 tRNA synthetases class I (I, L, M and V) EL388_RS02980 PF08264 Anticodon-binding domain of tRNA EL388_RS02980 PF06827 Zinc finger found in FPG and IleRS EL388_RS02985 PF06574 FAD synthetase EL388_RS02985 PF01687 Riboflavin kinase EL388_RS02990 PF03023 Lipid II flippase MurJ EL388_RS02995 PF01649 Ribosomal protein S20 EL388_RS03005 PF00719 Inorganic pyrophosphatase EL388_RS03015 PF01593 Flavin containing amine oxidoreductase EL388_RS03020 PF07992 Pyridine nucleotide-disulphide oxidoreductase EL388_RS03020 PF00724 NADH:flavin oxidoreductase / NADH oxidase family EL388_RS03030 PF02754 Cysteine-rich domain EL388_RS03045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EL388_RS03045 PF00512 His Kinase A (phospho-acceptor) domain EL388_RS03050 PF02954 Bacterial regulatory protein, Fis family EL388_RS03050 PF00158 Sigma-54 interaction domain EL388_RS03050 PF00072 Response regulator receiver domain EL388_RS03065 PF01510 N-acetylmuramoyl-L-alanine amidase EL388_RS03070 PF02261 Aspartate decarboxylase EL388_RS03075 PF02569 Pantoate-beta-alanine ligase EL388_RS03080 PF02548 Ketopantoate hydroxymethyltransferase EL388_RS03090 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) EL388_RS03095 PF01743 Poly A polymerase head domain EL388_RS03095 PF12627 Probable RNA and SrmB- binding site of polymerase A EL388_RS03095 PF12626 Polymerase A arginine-rich C-terminus EL388_RS03100 PF01618 MotA/TolQ/ExbB proton channel family EL388_RS03105 PF02472 Biopolymer transport protein ExbD/TolR EL388_RS03110 PF02606 Tetraacyldisaccharide-1-P 4'-kinase EL388_RS03115 PF02606 Tetraacyldisaccharide-1-P 4'-kinase EL388_RS03115 PF03966 Trm112p-like protein EL388_RS03135 PF02154 Flagellar motor switch protein FliM EL388_RS03135 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term EL388_RS03140 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term EL388_RS03145 PF04347 Flagellar biosynthesis protein, FliO EL388_RS03150 PF00813 FliP family EL388_RS03155 PF01313 Bacterial export proteins, family 3 EL388_RS03160 PF01311 Bacterial export proteins, family 1 EL388_RS03165 PF03848 Tellurite resistance protein TehB EL388_RS03170 PF00701 Dihydrodipicolinate synthetase family EL388_RS03175 PF06804 NlpB/DapX lipoprotein EL388_RS03180 PF12706 Beta-lactamase superfamily domain EL388_RS03185 PF00271 Helicase conserved C-terminal domain EL388_RS03185 PF00270 DEAD/DEAH box helicase EL388_RS03200 PF13183 4Fe-4S dicluster domain EL388_RS03200 PF02754 Cysteine-rich domain EL388_RS03220 PF00593 TonB dependent receptor EL388_RS03220 PF07715 TonB-dependent Receptor Plug Domain EL388_RS03230 PF12557 Cob(I)alamin adenosyltransferase N terminal EL388_RS03230 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP EL388_RS03235 PF03186 CobD/Cbib protein EL388_RS03235 PF17113 Regulatory signalling modulator protein AmpE EL388_RS03240 PF00155 Aminotransferase class I and II EL388_RS03245 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain EL388_RS03245 PF07685 CobB/CobQ-like glutamine amidotransferase domain EL388_RS03250 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase EL388_RS03255 PF02277 Phosphoribosyltransferase EL388_RS03265 PF02654 Cobalamin-5-phosphate synthase EL388_RS03270 PF02348 Cytidylyltransferase EL388_RS03275 PF05191 Adenylate kinase, active site lid EL388_RS03285 PF00365 Phosphofructokinase EL388_RS03295 PF03030 Inorganic H+ pyrophosphatase EL388_RS03310 PF08406 CbbQ/NirQ/NorQ C-terminal EL388_RS03310 PF07728 AAA domain (dynein-related subfamily) EL388_RS03320 PF00890 FAD binding domain EL388_RS03325 PF12139 Adenosine-5'-phosphosulfate reductase beta subunit EL388_RS03325 PF13187 4Fe-4S dicluster domain EL388_RS03330 PF14306 PUA-like domain EL388_RS03330 PF01747 ATP-sulfurylase EL388_RS03350 PF08668 HDOD domain EL388_RS03350 PF00563 EAL domain EL388_RS03355 PF02895 Signal transducing histidine kinase, homodimeric domain EL388_RS03355 PF01627 Hpt domain EL388_RS03355 PF01584 CheW-like domain EL388_RS03355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EL388_RS03355 PF00072 Response regulator receiver domain EL388_RS03360 PF04344 Chemotaxis phosphatase, CheZ EL388_RS03365 PF00072 Response regulator receiver domain EL388_RS03370 PF00072 Response regulator receiver domain EL388_RS03370 PF01584 CheW-like domain EL388_RS03375 PF01584 CheW-like domain EL388_RS03375 PF00072 Response regulator receiver domain EL388_RS03380 PF12729 Four helix bundle sensory module for signal transduction EL388_RS03380 PF00672 HAMP domain EL388_RS03380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EL388_RS03385 PF00989 PAS fold EL388_RS03385 PF00512 His Kinase A (phospho-acceptor) domain EL388_RS03385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EL388_RS03390 PF00158 Sigma-54 interaction domain EL388_RS03390 PF02954 Bacterial regulatory protein, Fis family EL388_RS03390 PF00072 Response regulator receiver domain EL388_RS03395 PF02049 Flagellar hook-basal body complex protein FliE EL388_RS03400 PF08345 Flagellar M-ring protein C-terminal EL388_RS03400 PF01514 Secretory protein of YscJ/FliF family EL388_RS03405 PF14842 FliG N-terminal domain EL388_RS03405 PF14841 FliG middle domain EL388_RS03405 PF01706 FliG C-terminal domain EL388_RS03410 PF02108 Flagellar assembly protein FliH EL388_RS03415 PF18269 T3SS EscN ATPase C-terminal domain EL388_RS03415 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EL388_RS03430 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase EL388_RS03430 PF12801 4Fe-4S binding domain EL388_RS03430 PF13746 4Fe-4S dicluster domain EL388_RS03435 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP EL388_RS03435 PF13442 Cytochrome C oxidase, cbb3-type, subunit III EL388_RS03450 PF00115 Cytochrome C and Quinol oxidase polypeptide I EL388_RS03455 PF03597 Cytochrome oxidase maturation protein cbb3-type EL388_RS03460 PF00403 Heavy-metal-associated domain EL388_RS03465 PF03588 Leucyl/phenylalanyl-tRNA protein transferase EL388_RS03470 PF04376 Arginine-tRNA-protein transferase, N terminus EL388_RS03470 PF04377 Arginine-tRNA-protein transferase, C terminus EL388_RS03485 PF00303 Thymidylate synthase EL388_RS03490 PF00186 Dihydrofolate reductase EL388_RS03495 PF07992 Pyridine nucleotide-disulphide oxidoreductase EL388_RS03495 PF13192 Thioredoxin domain EL388_RS03500 PF10417 C-terminal domain of 1-Cys peroxiredoxin EL388_RS03500 PF00578 AhpC/TSA family EL388_RS03505 PF13442 Cytochrome C oxidase, cbb3-type, subunit III EL388_RS03510 PF17200 Single Cache domain 2 EL388_RS03510 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EL388_RS03510 PF00672 HAMP domain EL388_RS03515 PF01177 Asp/Glu/Hydantoin racemase EL388_RS03520 PF08331 Domain of unknown function (DUF1730) EL388_RS03525 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE EL388_RS03530 PF11741 AMIN domain EL388_RS03530 PF01520 N-acetylmuramoyl-L-alanine amidase EL388_RS03535 PF07730 Histidine kinase EL388_RS03535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EL388_RS03535 PF05384 Sensor protein DegS EL388_RS03540 PF00196 Bacterial regulatory proteins, luxR family EL388_RS03540 PF00072 Response regulator receiver domain EL388_RS03545 PF00850 Histone deacetylase domain EL388_RS03550 PF00583 Acetyltransferase (GNAT) family EL388_RS03550 PF13380 CoA binding domain EL388_RS03550 PF13607 Succinyl-CoA ligase like flavodoxin domain EL388_RS03555 PF14824 Sirohaem biosynthesis protein central EL388_RS03555 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EL388_RS03555 PF10414 Sirohaem synthase dimerisation region EL388_RS03565 PF07685 CobB/CobQ-like glutamine amidotransferase domain EL388_RS03565 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain EL388_RS03570 PF03916 Polysulphide reductase, NrfD EL388_RS03575 PF13247 4Fe-4S dicluster domain EL388_RS03585 PF07992 Pyridine nucleotide-disulphide oxidoreductase EL388_RS03585 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster EL388_RS03600 PF04358 DsrC like protein EL388_RS03610 PF02635 DsrE/DsrF-like family EL388_RS03615 PF02635 DsrE/DsrF-like family EL388_RS03620 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain EL388_RS03620 PF01077 Nitrite and sulphite reductase 4Fe-4S domain EL388_RS03625 PF01077 Nitrite and sulphite reductase 4Fe-4S domain EL388_RS03625 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain EL388_RS03640 PF04358 DsrC like protein EL388_RS03645 PF00581 Rhodanese-like domain EL388_RS03660 PF00115 Cytochrome C and Quinol oxidase polypeptide I EL388_RS03665 PF00034 Cytochrome c EL388_RS03675 PF13442 Cytochrome C oxidase, cbb3-type, subunit III EL388_RS03680 PF13442 Cytochrome C oxidase, cbb3-type, subunit III EL388_RS03690 PF17805 AsnC-like ligand binding domain EL388_RS03695 PF13404 AsnC-type helix-turn-helix domain EL388_RS03695 PF17805 AsnC-like ligand binding domain EL388_RS03700 PF13404 AsnC-type helix-turn-helix domain EL388_RS03700 PF17805 AsnC-like ligand binding domain EL388_RS03705 PF13186 Iron-sulfur cluster-binding domain EL388_RS03705 PF04055 Radical SAM superfamily EL388_RS03730 PF03060 Nitronate monooxygenase EL388_RS03740 PF03707 Bacterial signalling protein N terminal repeat EL388_RS03740 PF00990 Diguanylate cyclase, GGDEF domain EL388_RS03740 PF00563 EAL domain EL388_RS03740 PF13188 PAS domain EL388_RS03745 PF00196 Bacterial regulatory proteins, luxR family EL388_RS03745 PF00072 Response regulator receiver domain EL388_RS03750 PF00672 HAMP domain EL388_RS03750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EL388_RS03750 PF07730 Histidine kinase EL388_RS03750 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term EL388_RS03755 PF07690 Major Facilitator Superfamily EL388_RS03760 PF07690 Major Facilitator Superfamily EL388_RS03765 PF01568 Molydopterin dinucleotide binding domain EL388_RS03765 PF00384 Molybdopterin oxidoreductase EL388_RS03765 PF14710 Respiratory nitrate reductase alpha N-terminal EL388_RS03770 PF14711 Respiratory nitrate reductase beta C-terminal EL388_RS03770 PF13247 4Fe-4S dicluster domain EL388_RS03775 PF02613 Nitrate reductase delta subunit EL388_RS03780 PF02665 Nitrate reductase gamma subunit EL388_RS03795 PF04055 Radical SAM superfamily EL388_RS03795 PF16199 Radical_SAM C-terminal domain EL388_RS03800 PF01136 Peptidase family U32 EL388_RS03805 PF01136 Peptidase family U32 EL388_RS03810 PF02036 SCP-2 sterol transfer family EL388_RS03835 PF01119 DNA mismatch repair protein, C-terminal domain EL388_RS03835 PF08676 MutL C terminal dimerisation domain EL388_RS03860 PF13742 OB-fold nucleic acid binding domain EL388_RS03860 PF02601 Exonuclease VII, large subunit EL388_RS03865 PF00202 Aminotransferase class-III EL388_RS03870 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain EL388_RS03870 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain EL388_RS03885 PF00764 Arginosuccinate synthase EL388_RS03890 PF06865 Pyrimidine/purine nucleoside phosphorylase EL388_RS03900 PF04461 Protein of unknown function (DUF520) EL388_RS03910 PF02254 TrkA-N domain EL388_RS03910 PF00999 Sodium/hydrogen exchanger family EL388_RS03925 PF00672 HAMP domain EL388_RS03925 PF12729 Four helix bundle sensory module for signal transduction EL388_RS03925 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EL388_RS03930 PF08003 Protein of unknown function (DUF1698) EL388_RS03935 PF17674 HHH domain EL388_RS03935 PF00575 S1 RNA binding domain EL388_RS03935 PF09371 Tex-like protein N-terminal domain EL388_RS03935 PF16921 Tex protein YqgF-like domain EL388_RS03940 PF00563 EAL domain EL388_RS03940 PF00990 Diguanylate cyclase, GGDEF domain EL388_RS03940 PF03707 Bacterial signalling protein N terminal repeat EL388_RS03945 PF00753 Metallo-beta-lactamase superfamily EL388_RS03950 PF02580 D-Tyr-tRNA(Tyr) deacylase EL388_RS03960 PF00724 NADH:flavin oxidoreductase / NADH oxidase family EL388_RS03970 PF00210 Ferritin-like domain EL388_RS03975 PF02535 ZIP Zinc transporter EL388_RS03985 PF00141 Peroxidase EL388_RS03990 PF03466 LysR substrate binding domain EL388_RS03990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EL388_RS04000 PF00171 Aldehyde dehydrogenase family EL388_RS04005 PF01625 Peptide methionine sulfoxide reductase EL388_RS04015 PF00990 Diguanylate cyclase, GGDEF domain EL388_RS04015 PF00563 EAL domain EL388_RS04015 PF03707 Bacterial signalling protein N terminal repeat EL388_RS04020 PF13406 Transglycosylase SLT domain EL388_RS04045 PF04143 Sulphur transport EL388_RS04055 PF01292 Prokaryotic cytochrome b561 EL388_RS04080 PF00849 RNA pseudouridylate synthase EL388_RS04080 PF01479 S4 domain EL388_RS04090 PF13520 Amino acid permease EL388_RS04095 PF01636 Phosphotransferase enzyme family EL388_RS04100 PF00343 Carbohydrate phosphorylase EL388_RS04145 PF02696 Uncharacterized ACR, YdiU/UPF0061 family EL388_RS04170 PF00274 Fructose-bisphosphate aldolase class-I EL388_RS04175 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain EL388_RS04175 PF00205 Thiamine pyrophosphate enzyme, central domain EL388_RS04175 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EL388_RS04185 PF02661 Fic/DOC family EL388_RS04185 PF13784 Fic/DOC family N-terminal EL388_RS04205 PF00580 UvrD/REP helicase N-terminal domain EL388_RS04205 PF13361 UvrD-like helicase C-terminal domain EL388_RS04210 PF02384 N-6 DNA Methylase EL388_RS04210 PF12161 HsdM N-terminal domain EL388_RS04245 PF08463 EcoEI R protein C-terminal EL388_RS04245 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) EL388_RS04245 PF00271 Helicase conserved C-terminal domain EL388_RS04245 PF04851 Type III restriction enzyme, res subunit EL388_RS04255 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system EL388_RS04300 PF01541 GIY-YIG catalytic domain EL388_RS04310 PF16658 Class II release factor RF3, C-terminal domain EL388_RS04310 PF00009 Elongation factor Tu GTP binding domain EL388_RS04310 PF03144 Elongation factor Tu domain 2 EL388_RS04315 PF00990 Diguanylate cyclase, GGDEF domain EL388_RS04320 PF01842 ACT domain EL388_RS04330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EL388_RS04330 PF03466 LysR substrate binding domain EL388_RS04340 PF02954 Bacterial regulatory protein, Fis family EL388_RS04340 PF00072 Response regulator receiver domain EL388_RS04340 PF00158 Sigma-54 interaction domain EL388_RS04345 PF08447 PAS fold EL388_RS04345 PF00989 PAS fold EL388_RS04345 PF00512 His Kinase A (phospho-acceptor) domain EL388_RS04345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EL388_RS04355 PF00384 Molybdopterin oxidoreductase EL388_RS04355 PF04879 Molybdopterin oxidoreductase Fe4S4 domain EL388_RS04355 PF01568 Molydopterin dinucleotide binding domain EL388_RS04360 PF13247 4Fe-4S dicluster domain EL388_RS04395 PF00005 ABC transporter EL388_RS04405 PF01545 Cation efflux family EL388_RS04435 PF01022 Bacterial regulatory protein, arsR family EL388_RS04460 PF01451 Low molecular weight phosphotyrosine protein phosphatase EL388_RS04465 PF01758 Sodium Bile acid symporter family EL388_RS04485 PF00672 HAMP domain EL388_RS04485 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) EL388_RS04485 PF00072 Response regulator receiver domain EL388_RS04485 PF01627 Hpt domain EL388_RS04485 PF00512 His Kinase A (phospho-acceptor) domain EL388_RS04485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EL388_RS04495 PF00753 Metallo-beta-lactamase superfamily EL388_RS04495 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain EL388_RS04495 PF10996 Beta-Casp domain EL388_RS04505 PF02754 Cysteine-rich domain EL388_RS04510 PF02589 LUD domain EL388_RS04510 PF13183 4Fe-4S dicluster domain EL388_RS04510 PF11870 Domain of unknown function (DUF3390) EL388_RS04515 PF02589 LUD domain EL388_RS04520 PF01924 Hydrogenase formation hypA family EL388_RS04525 PF02492 CobW/HypB/UreG, nucleotide-binding domain EL388_RS04530 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA EL388_RS04535 PF01455 HupF/HypC family EL388_RS04540 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal EL388_RS04540 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit EL388_RS04545 PF13247 4Fe-4S dicluster domain EL388_RS04550 PF03916 Polysulphide reductase, NrfD EL388_RS04555 PF00374 Nickel-dependent hydrogenase EL388_RS04565 PF01750 Hydrogenase maturation protease EL388_RS04575 PF03458 UPF0126 domain EL388_RS04580 PF03109 ABC1 family EL388_RS04595 PF00881 Nitroreductase family EL388_RS04600 PF00384 Molybdopterin oxidoreductase EL388_RS04600 PF01568 Molydopterin dinucleotide binding domain EL388_RS04600 PF18465 Rieske 3Fe-4S EL388_RS04605 PF00355 Rieske [2Fe-2S] domain EL388_RS04605 PF10518 TAT (twin-arginine translocation) pathway signal sequence EL388_RS04610 PF01145 SPFH domain / Band 7 family EL388_RS04610 PF16200 C-terminal region of band_7 EL388_RS04620 PF00571 CBS domain EL388_RS04620 PF03471 Transporter associated domain EL388_RS04620 PF01595 Cyclin M transmembrane N-terminal domain EL388_RS04640 PF01565 FAD binding domain EL388_RS04640 PF02913 FAD linked oxidases, C-terminal domain EL388_RS04645 PF01565 FAD binding domain EL388_RS04650 PF13183 4Fe-4S dicluster domain EL388_RS04650 PF02754 Cysteine-rich domain EL388_RS04655 PF00171 Aldehyde dehydrogenase family EL388_RS04660 PF03480 Bacterial extracellular solute-binding protein, family 7 EL388_RS04670 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component EL388_RS04670 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component EL388_RS04675 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EL388_RS04675 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EL388_RS04680 PF01425 Amidase EL388_RS04690 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase EL388_RS04690 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase EL388_RS04695 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EL388_RS04695 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EL388_RS04700 PF03741 Integral membrane protein TerC family EL388_RS04705 PF00582 Universal stress protein family EL388_RS04710 PF02595 Glycerate kinase family EL388_RS04715 PF01274 Malate synthase EL388_RS04725 PF01479 S4 domain EL388_RS04735 PF01965 DJ-1/PfpI family EL388_RS04750 PF03193 RsgA GTPase EL388_RS04755 PF01329 Pterin 4 alpha carbinolamine dehydratase EL388_RS04765 PF01435 Peptidase family M48 EL388_RS04770 PF00929 Exonuclease EL388_RS04775 PF11897 Protein of unknown function (DUF3417) EL388_RS04775 PF00343 Carbohydrate phosphorylase EL388_RS04780 PF08323 Starch synthase catalytic domain EL388_RS04780 PF00534 Glycosyl transferases group 1 EL388_RS04785 PF00989 PAS fold EL388_RS04785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EL388_RS04785 PF00512 His Kinase A (phospho-acceptor) domain EL388_RS04785 PF01627 Hpt domain EL388_RS04785 PF00497 Bacterial extracellular solute-binding proteins, family 3 EL388_RS04785 PF00072 Response regulator receiver domain EL388_RS04790 PF03707 Bacterial signalling protein N terminal repeat EL388_RS04790 PF00990 Diguanylate cyclase, GGDEF domain EL388_RS04790 PF00563 EAL domain EL388_RS04795 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain EL388_RS04795 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase EL388_RS04800 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain EL388_RS04800 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain EL388_RS04810 PF00072 Response regulator receiver domain EL388_RS04810 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) EL388_RS04810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EL388_RS04810 PF01627 Hpt domain EL388_RS04810 PF00672 HAMP domain EL388_RS04810 PF00512 His Kinase A (phospho-acceptor) domain EL388_RS04815 PF03190 Protein of unknown function, DUF255 EL388_RS04820 PF17820 PDZ domain EL388_RS04820 PF13180 PDZ domain EL388_RS04825 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal EL388_RS04825 PF00355 Rieske [2Fe-2S] domain EL388_RS04830 PF00032 Cytochrome b(C-terminal)/b6/petD EL388_RS04830 PF00033 Cytochrome b/b6/petB EL388_RS04835 PF02167 Cytochrome C1 family EL388_RS04840 PF02798 Glutathione S-transferase, N-terminal domain EL388_RS04840 PF00043 Glutathione S-transferase, C-terminal domain EL388_RS04880 PF01152 Bacterial-like globin EL388_RS04885 PF02885 Glycosyl transferase family, helical bundle domain EL388_RS04885 PF00591 Glycosyl transferase family, a/b domain EL388_RS04890 PF00355 Rieske [2Fe-2S] domain EL388_RS04895 PF00529 HlyD membrane-fusion protein of T1SS EL388_RS04895 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EL388_RS04900 PF00005 ABC transporter EL388_RS04900 PF02687 FtsX-like permease family EL388_RS04900 PF12704 MacB-like periplasmic core domain EL388_RS04905 PF00005 ABC transporter EL388_RS04915 PF00106 short chain dehydrogenase EL388_RS04925 PF02222 ATP-grasp domain EL388_RS04930 PF01965 DJ-1/PfpI family EL388_RS04935 PF00365 Phosphofructokinase EL388_RS04940 PF01136 Peptidase family U32 EL388_RS04940 PF16325 Peptidase family U32 C-terminal domain EL388_RS04950 PF17113 Regulatory signalling modulator protein AmpE EL388_RS04950 PF03186 CobD/Cbib protein EL388_RS04955 PF08447 PAS fold EL388_RS04955 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EL388_RS04955 PF13426 PAS domain EL388_RS04960 PF07670 Nucleoside recognition EL388_RS04965 PF02541 Ppx/GppA phosphatase family EL388_RS04970 PF13089 Polyphosphate kinase N-terminal domain EL388_RS04970 PF02503 Polyphosphate kinase middle domain EL388_RS04970 PF13090 Polyphosphate kinase C-terminal domain 2 EL388_RS04970 PF17941 Polyphosphate kinase C-terminal domain 1 EL388_RS04975 PF01928 CYTH domain EL388_RS04990 PF00384 Molybdopterin oxidoreductase EL388_RS04990 PF01568 Molydopterin dinucleotide binding domain EL388_RS04990 PF10518 TAT (twin-arginine translocation) pathway signal sequence EL388_RS04990 PF04879 Molybdopterin oxidoreductase Fe4S4 domain EL388_RS04995 PF12838 4Fe-4S dicluster domain EL388_RS04995 PF12800 4Fe-4S binding domain EL388_RS05000 PF13237 4Fe-4S dicluster domain EL388_RS05000 PF12801 4Fe-4S binding domain EL388_RS05005 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) EL388_RS05020 PF02537 CrcB-like protein, Camphor Resistance (CrcB) EL388_RS05035 PF06418 CTP synthase N-terminus EL388_RS05035 PF00117 Glutamine amidotransferase class-I EL388_RS05040 PF00793 DAHP synthetase I family EL388_RS05045 PF03952 Enolase, N-terminal domain EL388_RS05045 PF00113 Enolase, C-terminal TIM barrel domain EL388_RS05050 PF04977 Septum formation initiator EL388_RS05060 PF12826 Helix-hairpin-helix motif EL388_RS05060 PF03119 NAD-dependent DNA ligase C4 zinc finger domain EL388_RS05060 PF03120 NAD-dependent DNA ligase OB-fold domain EL388_RS05060 PF01653 NAD-dependent DNA ligase adenylation domain EL388_RS05060 PF00533 BRCA1 C Terminus (BRCT) domain EL388_RS05065 PF00483 Nucleotidyl transferase EL388_RS05070 PF01256 Carbohydrate kinase EL388_RS05080 PF00072 Response regulator receiver domain EL388_RS05085 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal EL388_RS05085 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain EL388_RS05085 PF02769 AIR synthase related protein, C-terminal domain EL388_RS05090 PF01966 HD domain EL388_RS05095 PF03144 Elongation factor Tu domain 2 EL388_RS05095 PF00679 Elongation factor G C-terminus EL388_RS05095 PF00009 Elongation factor Tu GTP binding domain EL388_RS05100 PF06167 Glucose-regulated metallo-peptidase M90 EL388_RS05105 PF00085 Thioredoxin EL388_RS05110 PF00155 Aminotransferase class I and II EL388_RS05125 PF08007 Cupin superfamily protein EL388_RS05130 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EL388_RS05135 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit EL388_RS05140 PF11734 TilS substrate C-terminal domain EL388_RS05140 PF09179 TilS substrate binding domain EL388_RS05140 PF01171 PP-loop family EL388_RS05150 PF00334 Nucleoside diphosphate kinase EL388_RS05155 PF04055 Radical SAM superfamily EL388_RS05170 PF04551 GcpE protein EL388_RS05175 PF13393 Histidyl-tRNA synthetase EL388_RS05175 PF03129 Anticodon binding domain EL388_RS05180 PF09976 Tetratricopeptide repeat-like domain EL388_RS05185 PF13360 PQQ-like domain EL388_RS05190 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal EL388_RS05190 PF01926 50S ribosome-binding GTPase EL388_RS05195 PF03707 Bacterial signalling protein N terminal repeat EL388_RS05195 PF00563 EAL domain EL388_RS05195 PF00990 Diguanylate cyclase, GGDEF domain EL388_RS05200 PF17209 Hfq protein EL388_RS05205 PF16360 GTP-binding GTPase Middle Region EL388_RS05205 PF13167 GTP-binding GTPase N-terminal EL388_RS05205 PF01926 50S ribosome-binding GTPase EL388_RS05210 PF12221 Bacterial membrane protein N terminal EL388_RS05210 PF01145 SPFH domain / Band 7 family EL388_RS05215 PF01145 SPFH domain / Band 7 family EL388_RS05225 PF13393 Histidyl-tRNA synthetase EL388_RS05230 PF00709 Adenylosuccinate synthetase EL388_RS05240 PF08461 Ribonuclease R winged-helix domain EL388_RS05240 PF00575 S1 RNA binding domain EL388_RS05240 PF00773 RNB domain EL388_RS05240 PF08206 Ribonuclease B OB domain EL388_RS05240 PF17876 Cold shock domain EL388_RS05245 PF00588 SpoU rRNA Methylase family EL388_RS05245 PF08032 RNA 2'-O ribose methyltransferase substrate binding EL388_RS05250 PF00156 Phosphoribosyl transferase domain EL388_RS05255 PF01048 Phosphorylase superfamily EL388_RS05270 PF00669 Bacterial flagellin N-terminal helical region EL388_RS05270 PF00700 Bacterial flagellin C-terminal helical region EL388_RS05275 PF07378 Flagellar protein FlbT EL388_RS05285 PF02719 Polysaccharide biosynthesis protein EL388_RS05290 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family EL388_RS05295 PF03102 NeuB family EL388_RS05295 PF08666 SAF domain EL388_RS05300 PF00117 Glutamine amidotransferase class-I EL388_RS05305 PF00977 Histidine biosynthesis protein EL388_RS05315 PF02348 Cytidylyltransferase EL388_RS05325 PF03102 NeuB family EL388_RS05325 PF08666 SAF domain EL388_RS05335 PF00535 Glycosyl transferase family 2 EL388_RS05350 PF01312 FlhB HrpN YscU SpaS Family EL388_RS05355 PF08335 GlnD PII-uridylyltransferase EL388_RS05355 PF01909 Nucleotidyltransferase domain EL388_RS05355 PF01966 HD domain EL388_RS05360 PF00557 Metallopeptidase family M24 EL388_RS05365 PF00708 Acylphosphatase EL388_RS05370 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EL388_RS05375 PF01588 Putative tRNA binding domain EL388_RS05375 PF09334 tRNA synthetases class I (M) EL388_RS05375 PF08264 Anticodon-binding domain of tRNA EL388_RS05385 PF00578 AhpC/TSA family EL388_RS05395 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EL388_RS05395 PF02824 TGS domain EL388_RS05395 PF03129 Anticodon binding domain EL388_RS05395 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain EL388_RS05400 PF05198 Translation initiation factor IF-3, N-terminal domain EL388_RS05400 PF00707 Translation initiation factor IF-3, C-terminal domain EL388_RS05405 PF01632 Ribosomal protein L35 EL388_RS05410 PF00453 Ribosomal protein L20 EL388_RS05420 PF01409 tRNA synthetases class II core domain (F) EL388_RS05420 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain EL388_RS05425 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain EL388_RS05425 PF01588 Putative tRNA binding domain EL388_RS05425 PF03484 tRNA synthetase B5 domain EL388_RS05425 PF03147 Ferredoxin-fold anticodon binding domain EL388_RS05425 PF03483 B3/4 domain EL388_RS05430 PF00216 Bacterial DNA-binding protein EL388_RS05445 PF01975 Survival protein SurE EL388_RS05455 PF01551 Peptidase family M23 EL388_RS05455 PF01476 LysM domain EL388_RS05460 PF04539 Sigma-70 region 3 EL388_RS05460 PF04542 Sigma-70 region 2 EL388_RS05460 PF00140 Sigma-70 factor, region 1.2 EL388_RS05460 PF04545 Sigma-70, region 4 EL388_RS05465 PF13419 Haloacid dehalogenase-like hydrolase EL388_RS05475 PF00155 Aminotransferase class I and II EL388_RS05480 PF03447 Homoserine dehydrogenase, NAD binding domain EL388_RS05480 PF01842 ACT domain EL388_RS05480 PF00742 Homoserine dehydrogenase EL388_RS05485 PF00291 Pyridoxal-phosphate dependent enzyme EL388_RS05485 PF14821 Threonine synthase N terminus EL388_RS05490 PF00990 Diguanylate cyclase, GGDEF domain EL388_RS05510 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain EL388_RS05510 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain EL388_RS05520 PF07724 AAA domain (Cdc48 subfamily) EL388_RS05520 PF02861 Clp amino terminal domain, pathogenicity island component EL388_RS05520 PF10431 C-terminal, D2-small domain, of ClpB protein EL388_RS05520 PF00004 ATPase family associated with various cellular activities (AAA) EL388_RS05520 PF17871 AAA lid domain EL388_RS05530 PF00578 AhpC/TSA family EL388_RS05535 PF01292 Prokaryotic cytochrome b561 EL388_RS05550 PF00694 Aconitase C-terminal domain EL388_RS05550 PF00330 Aconitase family (aconitate hydratase) EL388_RS05555 PF03401 Tripartite tricarboxylate transporter family receptor EL388_RS05565 PF01970 Tripartite tricarboxylate transporter TctA family EL388_RS05570 PF00390 Malic enzyme, N-terminal domain EL388_RS05570 PF03949 Malic enzyme, NAD binding domain EL388_RS05585 PF02910 Fumarate reductase flavoprotein C-term EL388_RS05585 PF00890 FAD binding domain EL388_RS05590 PF17202 Single cache domain 3 EL388_RS05590 PF00672 HAMP domain EL388_RS05590 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EL388_RS05595 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EL388_RS05595 PF08447 PAS fold EL388_RS05620 PF01545 Cation efflux family EL388_RS05650 PF00589 Phage integrase family EL388_RS05650 PF13495 Phage integrase, N-terminal SAM-like domain EL388_RS05655 PF01381 Helix-turn-helix EL388_RS05660 PF13085 2Fe-2S iron-sulfur cluster binding domain EL388_RS05670 PF00285 Citrate synthase, C-terminal domain EL388_RS05675 PF16078 2-oxoglutarate dehydrogenase N-terminus EL388_RS05675 PF02779 Transketolase, pyrimidine binding domain EL388_RS05675 PF16870 2-oxoglutarate dehydrogenase C-terminal EL388_RS05675 PF00676 Dehydrogenase E1 component EL388_RS05680 PF08521 Two-component sensor kinase N-terminal EL388_RS05680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EL388_RS05680 PF00512 His Kinase A (phospho-acceptor) domain EL388_RS05685 PF00486 Transcriptional regulatory protein, C terminal EL388_RS05685 PF00072 Response regulator receiver domain EL388_RS05710 PF01464 Transglycosylase SLT domain EL388_RS05710 PF00497 Bacterial extracellular solute-binding proteins, family 3 EL388_RS05715 PF02403 Seryl-tRNA synthetase N-terminal domain EL388_RS05715 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EL388_RS05720 PF00672 HAMP domain EL388_RS05720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EL388_RS05720 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) EL388_RS05720 PF00072 Response regulator receiver domain EL388_RS05720 PF01627 Hpt domain EL388_RS05720 PF00512 His Kinase A (phospho-acceptor) domain EL388_RS05725 PF02421 Ferrous iron transport protein B EL388_RS05725 PF07664 Ferrous iron transport protein B C terminus EL388_RS05725 PF07670 Nucleoside recognition EL388_RS05740 PF00005 ABC transporter EL388_RS05740 PF08402 TOBE domain EL388_RS05745 PF00528 Binding-protein-dependent transport system inner membrane component EL388_RS05755 PF10636 Hemin uptake protein hemP EL388_RS05770 PF03544 Gram-negative bacterial TonB protein C-terminal EL388_RS05775 PF01618 MotA/TolQ/ExbB proton channel family EL388_RS05780 PF02472 Biopolymer transport protein ExbD/TolR EL388_RS05785 PF00593 TonB dependent receptor EL388_RS05785 PF07715 TonB-dependent Receptor Plug Domain EL388_RS05790 PF13640 2OG-Fe(II) oxygenase superfamily EL388_RS05790 PF18331 PKHD-type hydroxylase C-terminal domain EL388_RS05795 PF01070 FMN-dependent dehydrogenase EL388_RS05800 PF03150 Di-haem cytochrome c peroxidase EL388_RS05810 PF00877 NlpC/P60 family EL388_RS05820 PF03109 ABC1 family EL388_RS05825 PF00484 Carbonic anhydrase EL388_RS05830 PF00266 Aminotransferase class-V EL388_RS05835 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EL388_RS05835 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EL388_RS05840 PF01817 Chorismate mutase type II EL388_RS05840 PF01842 ACT domain EL388_RS05840 PF00800 Prephenate dehydratase EL388_RS05845 PF00155 Aminotransferase class I and II EL388_RS05850 PF01842 ACT domain EL388_RS05850 PF02153 Prephenate dehydrogenase EL388_RS05860 PF00575 S1 RNA binding domain EL388_RS05865 PF00216 Bacterial DNA-binding protein EL388_RS05875 PF18073 Rubredoxin metal binding domain EL388_RS05880 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family EL388_RS05885 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain EL388_RS05885 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain EL388_RS05885 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain EL388_RS05890 PF00291 Pyridoxal-phosphate dependent enzyme EL388_RS05900 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EL388_RS05905 PF02545 Maf-like protein EL388_RS05910 PF00364 Biotin-requiring enzyme EL388_RS05910 PF00682 HMGL-like EL388_RS05910 PF02436 Conserved carboxylase domain EL388_RS05915 PF00289 Biotin carboxylase, N-terminal domain EL388_RS05915 PF02785 Biotin carboxylase C-terminal domain EL388_RS05915 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EL388_RS05920 PF02620 Large ribosomal RNA subunit accumulation protein YceD EL388_RS05925 PF01783 Ribosomal L32p protein family EL388_RS05930 PF02504 Fatty acid synthesis protein EL388_RS05935 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EL388_RS05935 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal EL388_RS05940 PF00698 Acyl transferase domain EL388_RS05950 PF00550 Phosphopantetheine attachment site EL388_RS05955 PF02801 Beta-ketoacyl synthase, C-terminal domain EL388_RS05955 PF00109 Beta-ketoacyl synthase, N-terminal domain EL388_RS05960 PF04715 Anthranilate synthase component I, N terminal region EL388_RS05960 PF00425 chorismate binding enzyme EL388_RS05965 PF01063 Amino-transferase class IV EL388_RS05970 PF02618 YceG-like family EL388_RS05975 PF02223 Thymidylate kinase EL388_RS05980 PF09115 DNA polymerase III, delta subunit, C terminal EL388_RS05990 PF01026 TatD related DNase EL388_RS06010 PF00004 ATPase family associated with various cellular activities (AAA) EL388_RS06010 PF07724 AAA domain (Cdc48 subfamily) EL388_RS06010 PF02861 Clp amino terminal domain, pathogenicity island component EL388_RS06010 PF10431 C-terminal, D2-small domain, of ClpB protein EL388_RS06010 PF17871 AAA lid domain EL388_RS06015 PF02617 ATP-dependent Clp protease adaptor protein ClpS EL388_RS06020 PF00313 'Cold-shock' DNA-binding domain EL388_RS06030 PF00180 Isocitrate/isopropylmalate dehydrogenase EL388_RS06035 PF00849 RNA pseudouridylate synthase EL388_RS06040 PF01979 Amidohydrolase family EL388_RS06045 PF00521 DNA gyrase/topoisomerase IV, subunit A EL388_RS06045 PF03989 DNA gyrase C-terminal domain, beta-propeller EL388_RS06050 PF17209 Hfq protein EL388_RS06055 PF00226 DnaJ domain EL388_RS06055 PF01556 DnaJ C terminal domain EL388_RS06065 PF01722 BolA-like protein EL388_RS06070 PF03795 YCII-related domain EL388_RS06075 PF04279 Intracellular septation protein A EL388_RS06080 PF02811 PHP domain EL388_RS06085 PF01300 Telomere recombination EL388_RS06090 PF02163 Peptidase family M50 EL388_RS06095 PF00579 tRNA synthetases class I (W and Y) EL388_RS06105 PF02616 Segregation and condensation protein ScpA EL388_RS06110 PF04079 Segregation and condensation complex subunit ScpB EL388_RS06115 PF00849 RNA pseudouridylate synthase EL388_RS06115 PF01479 S4 domain EL388_RS06120 PF05552 Conserved TM helix EL388_RS06125 PF05175 Methyltransferase small domain EL388_RS06130 PF01546 Peptidase family M20/M25/M40 EL388_RS06130 PF07687 Peptidase dimerisation domain EL388_RS06135 PF03960 ArsC family EL388_RS06140 PF13673 Acetyltransferase (GNAT) domain EL388_RS06145 PF02542 YgbB family EL388_RS06160 PF00581 Rhodanese-like domain EL388_RS06165 PF01668 SmpB protein EL388_RS06170 PF03364 Polyketide cyclase / dehydrase and lipid transport EL388_RS06175 PF03658 RnfH family Ubiquitin EL388_RS06185 PF00478 IMP dehydrogenase / GMP reductase domain EL388_RS06185 PF00571 CBS domain EL388_RS06190 PF02540 NAD synthase EL388_RS06190 PF00117 Glutamine amidotransferase class-I EL388_RS06190 PF00958 GMP synthase C terminal domain EL388_RS06200 PF00005 ABC transporter EL388_RS06215 PF13533 Biotin-lipoyl like EL388_RS06220 PF00440 Bacterial regulatory proteins, tetR family EL388_RS06245 PF01381 Helix-turn-helix EL388_RS06265 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EL388_RS06275 PF00528 Binding-protein-dependent transport system inner membrane component EL388_RS06280 PF12911 N-terminal TM domain of oligopeptide transport permease C EL388_RS06280 PF00528 Binding-protein-dependent transport system inner membrane component EL388_RS06285 PF00005 ABC transporter EL388_RS06285 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EL388_RS06290 PF01476 LysM domain EL388_RS06290 PF01464 Transglycosylase SLT domain EL388_RS06295 PF00753 Metallo-beta-lactamase superfamily EL388_RS06295 PF16123 Hydroxyacylglutathione hydrolase C-terminus EL388_RS06300 PF08241 Methyltransferase domain EL388_RS06305 PF00075 RNase H EL388_RS06310 PF00929 Exonuclease EL388_RS06325 PF04316 Anti-sigma-28 factor, FlgM EL388_RS06335 PF00990 Diguanylate cyclase, GGDEF domain EL388_RS06340 PF00460 Flagella basal body rod protein EL388_RS06345 PF00460 Flagella basal body rod protein EL388_RS06345 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EL388_RS06350 PF13860 FlgD Ig-like domain EL388_RS06350 PF03963 Flagellar hook capping protein - N-terminal region EL388_RS06350 PF13861 FlgD Tudor-like domain EL388_RS06355 PF07559 Flagellar basal body protein FlaE EL388_RS06355 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EL388_RS06355 PF00460 Flagella basal body rod protein EL388_RS06360 PF00460 Flagella basal body rod protein EL388_RS06360 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EL388_RS06365 PF00460 Flagella basal body rod protein EL388_RS06365 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EL388_RS06370 PF02107 Flagellar L-ring protein EL388_RS06375 PF02119 Flagellar P-ring protein EL388_RS06380 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase EL388_RS06380 PF10135 Rod binding protein EL388_RS06385 PF00460 Flagella basal body rod protein EL388_RS06385 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EL388_RS06390 PF00669 Bacterial flagellin N-terminal helical region EL388_RS06395 PF17757 UvrB interaction domain EL388_RS06395 PF02559 CarD-like/TRCF domain EL388_RS06395 PF03461 TRCF domain EL388_RS06395 PF00271 Helicase conserved C-terminal domain EL388_RS06395 PF00270 DEAD/DEAH box helicase EL388_RS06400 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain EL388_RS06400 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain EL388_RS06415 PF12146 Serine aminopeptidase, S33 EL388_RS06430 PF07885 Ion channel EL388_RS06430 PF00027 Cyclic nucleotide-binding domain EL388_RS06440 PF00535 Glycosyl transferase family 2 EL388_RS06455 PF00072 Response regulator receiver domain EL388_RS06455 PF00486 Transcriptional regulatory protein, C terminal EL388_RS06460 PF00211 Adenylate and Guanylate cyclase catalytic domain EL388_RS06475 PF01875 Memo-like protein EL388_RS06480 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase EL388_RS06485 PF04607 Region found in RelA / SpoT proteins EL388_RS06485 PF02824 TGS domain EL388_RS06485 PF13291 ACT domain EL388_RS06490 PF13525 Outer membrane lipoprotein EL388_RS06495 PF00849 RNA pseudouridylate synthase EL388_RS06500 PF02578 Multi-copper polyphenol oxidoreductase laccase EL388_RS06510 PF18693 TRAM domain EL388_RS06510 PF04055 Radical SAM superfamily EL388_RS06510 PF00919 Uncharacterized protein family UPF0004 EL388_RS06515 PF00293 NUDIX domain EL388_RS06525 PF13417 Glutathione S-transferase, N-terminal domain EL388_RS06525 PF00043 Glutathione S-transferase, C-terminal domain EL388_RS06530 PF00749 tRNA synthetases class I (E and Q), catalytic domain EL388_RS06565 PF00589 Phage integrase family EL388_RS06580 PF00155 Aminotransferase class I and II EL388_RS06585 PF17757 UvrB interaction domain EL388_RS06585 PF12344 Ultra-violet resistance protein B EL388_RS06585 PF02151 UvrB/uvrC motif EL388_RS06585 PF00271 Helicase conserved C-terminal domain EL388_RS06585 PF04851 Type III restriction enzyme, res subunit EL388_RS06590 PF04358 DsrC like protein EL388_RS06600 PF01451 Low molecular weight phosphotyrosine protein phosphatase EL388_RS06605 PF12111 Polyribonucleotide phosphorylase C terminal EL388_RS06605 PF00575 S1 RNA binding domain EL388_RS06605 PF10150 Ribonuclease E/G family EL388_RS06610 PF00849 RNA pseudouridylate synthase EL388_RS06610 PF01479 S4 domain EL388_RS06615 PF13419 Haloacid dehalogenase-like hydrolase EL388_RS06625 PF06965 Na+/H+ antiporter 1 EL388_RS06625 PF01343 Peptidase family S49 EL388_RS06635 PF01025 GrpE EL388_RS06640 PF00012 Hsp70 protein EL388_RS06645 PF13180 PDZ domain EL388_RS06655 PF00999 Sodium/hydrogen exchanger family EL388_RS06655 PF02254 TrkA-N domain EL388_RS06660 PF02080 TrkA-C domain EL388_RS06660 PF00999 Sodium/hydrogen exchanger family EL388_RS06660 PF02254 TrkA-N domain EL388_RS06665 PF00085 Thioredoxin EL388_RS06675 PF01434 Peptidase family M41 EL388_RS06675 PF17862 AAA+ lid domain EL388_RS06675 PF00004 ATPase family associated with various cellular activities (AAA) EL388_RS06680 PF01435 Peptidase family M48 EL388_RS06690 PF00226 DnaJ domain EL388_RS06690 PF01556 DnaJ C terminal domain EL388_RS06695 PF00011 Hsp20/alpha crystallin family EL388_RS06700 PF00011 Hsp20/alpha crystallin family EL388_RS06705 PF00011 Hsp20/alpha crystallin family EL388_RS06710 PF04358 DsrC like protein EL388_RS06715 PF00684 DnaJ central domain EL388_RS06715 PF00226 DnaJ domain EL388_RS06715 PF01556 DnaJ C terminal domain EL388_RS06725 PF00364 Biotin-requiring enzyme EL388_RS06725 PF02817 e3 binding domain EL388_RS06725 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) EL388_RS06730 PF03746 LamB/YcsF family EL388_RS06735 PF02626 Carboxyltransferase domain, subdomain A and B EL388_RS06745 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal EL388_RS06745 PF14602 Hexapeptide repeat of succinyl-transferase EL388_RS06745 PF00132 Bacterial transferase hexapeptide (six repeats) EL388_RS06750 PF00155 Aminotransferase class I and II EL388_RS06775 PF02782 FGGY family of carbohydrate kinases, C-terminal domain EL388_RS06780 PF14489 QueF-like protein EL388_RS06785 PF02463 RecF/RecN/SMC N terminal domain EL388_RS06785 PF06470 SMC proteins Flexible Hinge Domain EL388_RS06790 PF08448 PAS fold EL388_RS06790 PF08447 PAS fold EL388_RS06790 PF00990 Diguanylate cyclase, GGDEF domain EL388_RS06790 PF00563 EAL domain EL388_RS06800 PF13307 Helicase C-terminal domain EL388_RS06800 PF04851 Type III restriction enzyme, res subunit EL388_RS06810 PF00814 Glycoprotease family EL388_RS06815 PF00583 Acetyltransferase (GNAT) family EL388_RS06815 PF13380 CoA binding domain EL388_RS06815 PF13607 Succinyl-CoA ligase like flavodoxin domain EL388_RS06825 PF04011 LemA family EL388_RS06830 PF04536 TPM domain EL388_RS06840 PF07690 Major Facilitator Superfamily EL388_RS06845 PF03466 LysR substrate binding domain EL388_RS06845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EL388_RS06860 PF13419 Haloacid dehalogenase-like hydrolase EL388_RS06880 PF02796 Helix-turn-helix domain of resolvase EL388_RS06880 PF00239 Resolvase, N terminal domain EL388_RS06975 PF01555 DNA methylase EL388_RS06980 PF02195 ParB-like nuclease domain EL388_RS07140 PF00183 Hsp90 protein EL388_RS07150 PF01555 DNA methylase EL388_RS07150 PF18755 Restriction Enzyme Adenine Methylase Associated EL388_RS07155 PF13361 UvrD-like helicase C-terminal domain EL388_RS07155 PF00580 UvrD/REP helicase N-terminal domain EL388_RS07195 PF00005 ABC transporter EL388_RS07195 PF00664 ABC transporter transmembrane region EL388_RS07200 PF02875 Mur ligase family, glutamate ligase domain EL388_RS07200 PF08245 Mur ligase middle domain EL388_RS07200 PF08443 RimK-like ATP-grasp domain EL388_RS07205 PF08443 RimK-like ATP-grasp domain EL388_RS07205 PF02875 Mur ligase family, glutamate ligase domain EL388_RS07205 PF08245 Mur ligase middle domain EL388_RS07210 PF09285 Elongation factor P, C-terminal EL388_RS07210 PF01132 Elongation factor P (EF-P) OB domain EL388_RS07210 PF08207 Elongation factor P (EF-P) KOW-like domain EL388_RS07220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EL388_RS07220 PF00512 His Kinase A (phospho-acceptor) domain EL388_RS07220 PF00989 PAS fold EL388_RS07225 PF00512 His Kinase A (phospho-acceptor) domain EL388_RS07225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EL388_RS07225 PF00989 PAS fold EL388_RS07230 PF18073 Rubredoxin metal binding domain EL388_RS07235 PF00106 short chain dehydrogenase EL388_RS07245 PF00724 NADH:flavin oxidoreductase / NADH oxidase family EL388_RS07245 PF07992 Pyridine nucleotide-disulphide oxidoreductase EL388_RS07265 PF03928 Haem-degrading EL388_RS07270 PF05697 Bacterial trigger factor protein (TF) EL388_RS07270 PF05698 Bacterial trigger factor protein (TF) C-terminus EL388_RS07270 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EL388_RS07275 PF00574 Clp protease EL388_RS07280 PF06689 ClpX C4-type zinc finger EL388_RS07280 PF10431 C-terminal, D2-small domain, of ClpB protein EL388_RS07280 PF07724 AAA domain (Cdc48 subfamily) EL388_RS07285 PF00004 ATPase family associated with various cellular activities (AAA) EL388_RS07285 PF02190 ATP-dependent protease La (LON) substrate-binding domain EL388_RS07285 PF05362 Lon protease (S16) C-terminal proteolytic domain EL388_RS07290 PF00216 Bacterial DNA-binding protein EL388_RS07305 PF13145 PPIC-type PPIASE domain EL388_RS07310 PF12704 MacB-like periplasmic core domain EL388_RS07310 PF00005 ABC transporter EL388_RS07310 PF02687 FtsX-like permease family EL388_RS07315 PF02687 FtsX-like permease family EL388_RS07315 PF00005 ABC transporter EL388_RS07315 PF12704 MacB-like periplasmic core domain EL388_RS07320 PF00005 ABC transporter EL388_RS07320 PF02687 FtsX-like permease family EL388_RS07320 PF12704 MacB-like periplasmic core domain EL388_RS07330 PF14437 MafB19-like deaminase EL388_RS07340 PF01713 Smr domain EL388_RS07345 PF07992 Pyridine nucleotide-disulphide oxidoreductase EL388_RS07350 PF01580 FtsK/SpoIIIE family EL388_RS07350 PF13491 4TM region of DNA translocase FtsK/SpoIIIE EL388_RS07350 PF09397 Ftsk gamma domain EL388_RS07350 PF17854 FtsK alpha domain EL388_RS07355 PF03548 Outer membrane lipoprotein carrier protein LolA EL388_RS07360 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EL388_RS07360 PF00403 Heavy-metal-associated domain EL388_RS07360 PF07992 Pyridine nucleotide-disulphide oxidoreductase EL388_RS07365 PF00403 Heavy-metal-associated domain EL388_RS07370 PF02411 MerT mercuric transport protein EL388_RS07375 PF00376 MerR family regulatory protein EL388_RS07375 PF09278 MerR, DNA binding EL388_RS07380 PF00004 ATPase family associated with various cellular activities (AAA) EL388_RS07380 PF12002 MgsA AAA+ ATPase C terminal EL388_RS07380 PF16193 AAA C-terminal domain EL388_RS07385 PF00318 Ribosomal protein S2 EL388_RS07390 PF00889 Elongation factor TS EL388_RS07395 PF00696 Amino acid kinase family EL388_RS07400 PF01765 Ribosome recycling factor EL388_RS07405 PF01255 Putative undecaprenyl diphosphate synthase EL388_RS07415 PF13288 DXP reductoisomerase C-terminal domain EL388_RS07415 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase EL388_RS07415 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain EL388_RS07420 PF17820 PDZ domain EL388_RS07420 PF13180 PDZ domain EL388_RS07420 PF02163 Peptidase family M50 EL388_RS07425 PF07244 Surface antigen variable number repeat EL388_RS07425 PF01103 Surface antigen EL388_RS07430 PF03938 Outer membrane protein (OmpH-like) EL388_RS07435 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD EL388_RS07435 PF00132 Bacterial transferase hexapeptide (six repeats) EL388_RS07440 PF07977 FabA-like domain EL388_RS07445 PF00132 Bacterial transferase hexapeptide (six repeats) EL388_RS07445 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 EL388_RS07450 PF02684 Lipid-A-disaccharide synthetase EL388_RS07455 PF01351 Ribonuclease HII EL388_RS07460 PF01618 MotA/TolQ/ExbB proton channel family EL388_RS07470 PF00691 OmpA family EL388_RS07470 PF13677 Membrane MotB of proton-channel complex MotA/MotB EL388_RS07485 PF00391 PEP-utilising enzyme, mobile domain EL388_RS07485 PF02896 PEP-utilising enzyme, TIM barrel domain EL388_RS07485 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain EL388_RS07490 PF03618 Kinase/pyrophosphorylase EL388_RS07495 PF08032 RNA 2'-O ribose methyltransferase substrate binding EL388_RS07495 PF00588 SpoU rRNA Methylase family EL388_RS07505 PF01336 OB-fold nucleic acid binding domain EL388_RS07505 PF07733 Bacterial DNA polymerase III alpha NTPase domain EL388_RS07505 PF17657 Bacterial DNA polymerase III alpha subunit finger domain EL388_RS07505 PF14579 Helix-hairpin-helix motif EL388_RS07505 PF02811 PHP domain EL388_RS07515 PF04321 RmlD substrate binding domain EL388_RS07520 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase EL388_RS07525 PF00483 Nucleotidyl transferase EL388_RS07530 PF16363 GDP-mannose 4,6 dehydratase EL388_RS07535 PF13638 PIN domain EL388_RS07535 PF02562 PhoH-like protein EL388_RS07540 PF00578 AhpC/TSA family EL388_RS07545 PF00563 EAL domain EL388_RS07545 PF08668 HDOD domain EL388_RS07555 PF09335 SNARE associated Golgi protein EL388_RS07560 PF00909 Ammonium Transporter Family EL388_RS07565 PF00902 Sec-independent protein translocase protein (TatC) EL388_RS07570 PF02416 mttA/Hcf106 family EL388_RS07575 PF02416 mttA/Hcf106 family EL388_RS07585 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase EL388_RS07590 PF01502 Phosphoribosyl-AMP cyclohydrolase EL388_RS07595 PF00977 Histidine biosynthesis protein EL388_RS07600 PF00977 Histidine biosynthesis protein EL388_RS07605 PF00117 Glutamine amidotransferase class-I EL388_RS07610 PF00475 Imidazoleglycerol-phosphate dehydratase EL388_RS07615 PF00155 Aminotransferase class I and II EL388_RS07620 PF00815 Histidinol dehydrogenase EL388_RS07625 PF01634 ATP phosphoribosyltransferase EL388_RS07630 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) EL388_RS07640 PF01061 ABC-2 type transporter EL388_RS07645 PF00005 ABC transporter EL388_RS07660 PF02470 MlaD protein EL388_RS07665 PF02405 Permease MlaE EL388_RS07670 PF00005 ABC transporter EL388_RS07680 PF01406 tRNA synthetases class I (C) catalytic domain EL388_RS07680 PF09190 DALR domain EL388_RS07685 PF00270 DEAD/DEAH box helicase EL388_RS07685 PF09382 RQC domain EL388_RS07685 PF00570 HRDC domain EL388_RS07685 PF16124 RecQ zinc-binding EL388_RS07685 PF00271 Helicase conserved C-terminal domain EL388_RS07695 PF08808 RES domain EL388_RS07700 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain EL388_RS07700 PF00749 tRNA synthetases class I (E and Q), catalytic domain EL388_RS07715 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD EL388_RS07720 PF00149 Calcineurin-like phosphoesterase EL388_RS07730 PF01053 Cys/Met metabolism PLP-dependent enzyme EL388_RS07735 PF00156 Phosphoribosyl transferase domain EL388_RS07740 PF02674 Colicin V production protein EL388_RS07750 PF02875 Mur ligase family, glutamate ligase domain EL388_RS07750 PF08245 Mur ligase middle domain EL388_RS07755 PF01039 Carboxyl transferase domain EL388_RS07755 PF17848 Acetyl-coA carboxylase zinc finger domain EL388_RS07760 PF00290 Tryptophan synthase alpha chain EL388_RS07765 PF00291 Pyridoxal-phosphate dependent enzyme EL388_RS07770 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase EL388_RS07775 PF01416 tRNA pseudouridine synthase EL388_RS07795 PF02774 Semialdehyde dehydrogenase, dimerisation domain EL388_RS07795 PF01118 Semialdehyde dehydrogenase, NAD binding domain EL388_RS07800 PF00180 Isocitrate/isopropylmalate dehydrogenase EL388_RS07805 PF00694 Aconitase C-terminal domain EL388_RS07815 PF00330 Aconitase family (aconitate hydratase) EL388_RS07830 PF01264 Chorismate synthase EL388_RS07835 PF03707 Bacterial signalling protein N terminal repeat EL388_RS07835 PF00990 Diguanylate cyclase, GGDEF domain EL388_RS07835 PF00563 EAL domain EL388_RS07840 PF02789 Cytosol aminopeptidase family, N-terminal domain EL388_RS07840 PF00883 Cytosol aminopeptidase family, catalytic domain EL388_RS07845 PF00676 Dehydrogenase E1 component EL388_RS07850 PF02780 Transketolase, C-terminal domain EL388_RS07850 PF02779 Transketolase, pyrimidine binding domain EL388_RS07850 PF00364 Biotin-requiring enzyme EL388_RS07855 PF07992 Pyridine nucleotide-disulphide oxidoreductase EL388_RS07855 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EL388_RS07860 PF00196 Bacterial regulatory proteins, luxR family EL388_RS07860 PF00072 Response regulator receiver domain EL388_RS07865 PF00005 ABC transporter EL388_RS07865 PF12848 ABC transporter EL388_RS07870 PF04102 SlyX EL388_RS07880 PF00990 Diguanylate cyclase, GGDEF domain EL388_RS07885 PF01180 Dihydroorotate dehydrogenase EL388_RS07895 PF04542 Sigma-70 region 2 EL388_RS07895 PF08281 Sigma-70, region 4 EL388_RS07910 PF01262 Alanine dehydrogenase/PNT, C-terminal domain EL388_RS07910 PF05222 Alanine dehydrogenase/PNT, N-terminal domain EL388_RS07925 PF02508 Rnf-Nqr subunit, membrane protein EL388_RS07930 PF04060 Putative Fe-S cluster EL388_RS07935 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit EL388_RS07935 PF12838 4Fe-4S dicluster domain EL388_RS07935 PF13375 RnfC Barrel sandwich hybrid domain EL388_RS07935 PF10531 SLBB domain EL388_RS07940 PF03116 NQR2, RnfD, RnfE family EL388_RS07945 PF04205 FMN-binding domain EL388_RS07950 PF02508 Rnf-Nqr subunit, membrane protein EL388_RS07955 PF00730 HhH-GPD superfamily base excision DNA repair protein EL388_RS07955 PF10576 Iron-sulfur binding domain of endonuclease III EL388_RS07955 PF00633 Helix-hairpin-helix motif EL388_RS07970 PF00376 MerR family regulatory protein EL388_RS07970 PF13614 AAA domain EL388_RS07975 PF00970 Oxidoreductase FAD-binding domain EL388_RS07975 PF00111 2Fe-2S iron-sulfur cluster binding domain EL388_RS07975 PF00175 Oxidoreductase NAD-binding domain EL388_RS07980 PF17768 RecJ OB domain EL388_RS07980 PF02272 DHHA1 domain EL388_RS07980 PF01368 DHH family EL388_RS07985 PF13194 Domain of unknown function (DUF4010) EL388_RS07990 PF08668 HDOD domain EL388_RS07990 PF00563 EAL domain EL388_RS08000 PF01139 tRNA-splicing ligase RtcB EL388_RS08015 PF01336 OB-fold nucleic acid binding domain EL388_RS08015 PF00152 tRNA synthetases class II (D, K and N) EL388_RS08020 PF18541 RuvC endonuclease subdomain 3 EL388_RS08020 PF13395 HNH endonuclease EL388_RS08020 PF18061 CRISPR-Cas9 WED domain EL388_RS08020 PF18070 CRISPR-Cas9 PI domain EL388_RS08020 PF18470 Cas9 alpha-helical lobe domain EL388_RS08030 PF09827 CRISPR associated protein Cas2 EL388_RS08035 PF00300 Histidine phosphatase superfamily (branch 1) EL388_RS08040 PF00300 Histidine phosphatase superfamily (branch 1) EL388_RS08045 PF07726 ATPase family associated with various cellular activities (AAA) EL388_RS08045 PF17863 AAA lid domain EL388_RS08055 PF01841 Transglutaminase-like superfamily EL388_RS08055 PF13559 Domain of unknown function (DUF4129) EL388_RS08055 PF11992 Domain of unknown function (DUF3488) EL388_RS08065 PF00881 Nitroreductase family EL388_RS08070 PF01638 HxlR-like helix-turn-helix EL388_RS08075 PF00403 Heavy-metal-associated domain EL388_RS08080 PF00717 Peptidase S24-like EL388_RS08080 PF01726 LexA DNA binding domain EL388_RS08090 PF00578 AhpC/TSA family EL388_RS08100 PF13203 Putative metallopeptidase domain EL388_RS08100 PF09967 VWA-like domain (DUF2201) EL388_RS08105 PF02861 Clp amino terminal domain, pathogenicity island component EL388_RS08105 PF00004 ATPase family associated with various cellular activities (AAA) EL388_RS08105 PF07724 AAA domain (Cdc48 subfamily) EL388_RS08105 PF17871 AAA lid domain EL388_RS08105 PF10431 C-terminal, D2-small domain, of ClpB protein EL388_RS08115 PF00072 Response regulator receiver domain EL388_RS08125 PF00753 Metallo-beta-lactamase superfamily EL388_RS08125 PF00581 Rhodanese-like domain EL388_RS08135 PF08241 Methyltransferase domain EL388_RS08140 PF00183 Hsp90 protein EL388_RS08140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EL388_RS08145 PF01113 Dihydrodipicolinate reductase, N-terminus EL388_RS08145 PF05173 Dihydrodipicolinate reductase, C-terminus EL388_RS08150 PF04355 SmpA / OmlA family EL388_RS08155 PF01475 Ferric uptake regulator family EL388_RS08160 PF02463 RecF/RecN/SMC N terminal domain EL388_RS08165 PF01513 ATP-NAD kinase EL388_RS08170 PF01628 HrcA protein C terminal domain EL388_RS08175 PF00762 Ferrochelatase EL388_RS08185 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding EL388_RS08185 PF10518 TAT (twin-arginine translocation) pathway signal sequence EL388_RS08185 PF07992 Pyridine nucleotide-disulphide oxidoreductase EL388_RS08190 PF12706 Beta-lactamase superfamily domain EL388_RS08190 PF00753 Metallo-beta-lactamase superfamily EL388_RS08195 PF00211 Adenylate and Guanylate cyclase catalytic domain EL388_RS08200 PF01435 Peptidase family M48 EL388_RS08210 PF02405 Permease MlaE EL388_RS08235 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EL388_RS08245 PF00483 Nucleotidyl transferase EL388_RS08250 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) EL388_RS08250 PF02806 Alpha amylase, C-terminal all-beta domain EL388_RS08250 PF00128 Alpha amylase, catalytic domain EL388_RS08255 PF00342 Phosphoglucose isomerase EL388_RS08270 PF03772 Competence protein EL388_RS08270 PF00753 Metallo-beta-lactamase superfamily EL388_RS08285 PF00005 ABC transporter EL388_RS08290 PF12704 MacB-like periplasmic core domain EL388_RS08290 PF02687 FtsX-like permease family EL388_RS08295 PF01894 Uncharacterised protein family UPF0047 EL388_RS08310 PF13649 Methyltransferase domain EL388_RS08315 PF00990 Diguanylate cyclase, GGDEF domain EL388_RS08315 PF00563 EAL domain EL388_RS08315 PF13188 PAS domain EL388_RS08315 PF03707 Bacterial signalling protein N terminal repeat EL388_RS08320 PF00512 His Kinase A (phospho-acceptor) domain EL388_RS08320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EL388_RS08325 PF00072 Response regulator receiver domain EL388_RS08330 PF00512 His Kinase A (phospho-acceptor) domain EL388_RS08330 PF01627 Hpt domain EL388_RS08330 PF00072 Response regulator receiver domain EL388_RS08330 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) EL388_RS08330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EL388_RS08330 PF00672 HAMP domain EL388_RS08335 PF00072 Response regulator receiver domain EL388_RS08335 PF00990 Diguanylate cyclase, GGDEF domain EL388_RS08340 PF00072 Response regulator receiver domain EL388_RS08345 PF01180 Dihydroorotate dehydrogenase EL388_RS08350 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase EL388_RS08350 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EL388_RS08350 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II EL388_RS08350 PF10371 Domain of unknown function EL388_RS08350 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg EL388_RS08355 PF07715 TonB-dependent Receptor Plug Domain EL388_RS08355 PF00593 TonB dependent receptor EL388_RS08360 PF00512 His Kinase A (phospho-acceptor) domain EL388_RS08360 PF01627 Hpt domain EL388_RS08360 PF00072 Response regulator receiver domain EL388_RS08360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EL388_RS08360 PF17149 Periplasmic sensor domain found in signal transduction proteins EL388_RS08360 PF00672 HAMP domain EL388_RS08370 PF04493 Endonuclease V EL388_RS08375 PF00691 OmpA family EL388_RS08375 PF05736 OprF membrane domain EL388_RS08380 PF01949 Protein of unknown function DUF99 EL388_RS08390 PF12706 Beta-lactamase superfamily domain EL388_RS08405 PF00563 EAL domain EL388_RS08405 PF08448 PAS fold EL388_RS08405 PF00990 Diguanylate cyclase, GGDEF domain EL388_RS08410 PF00270 DEAD/DEAH box helicase EL388_RS08410 PF00271 Helicase conserved C-terminal domain EL388_RS08420 PF13614 AAA domain EL388_RS08425 PF00708 Acylphosphatase EL388_RS08425 PF01300 Telomere recombination EL388_RS08425 PF07503 HypF finger EL388_RS08425 PF17788 HypF Kae1-like domain EL388_RS08430 PF00586 AIR synthase related protein, N-terminal domain EL388_RS08430 PF02769 AIR synthase related protein, C-terminal domain EL388_RS08440 PF00899 ThiF family EL388_RS08460 PF02678 Pirin EL388_RS08460 PF05726 Pirin C-terminal cupin domain EL388_RS08470 PF00892 EamA-like transporter family EL388_RS08475 PF02646 RmuC family EL388_RS08480 PF00005 ABC transporter EL388_RS08480 PF02687 FtsX-like permease family EL388_RS08480 PF12704 MacB-like periplasmic core domain EL388_RS08485 PF12704 MacB-like periplasmic core domain EL388_RS08485 PF02687 FtsX-like permease family EL388_RS08485 PF00005 ABC transporter EL388_RS08490 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EL388_RS08495 PF08402 TOBE domain EL388_RS08495 PF00005 ABC transporter EL388_RS08500 PF00528 Binding-protein-dependent transport system inner membrane component EL388_RS08510 PF03459 TOBE domain EL388_RS08510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EL388_RS08515 PF07690 Major Facilitator Superfamily EL388_RS08520 PF07726 ATPase family associated with various cellular activities (AAA) EL388_RS08520 PF17863 AAA lid domain EL388_RS08525 PF01882 Protein of unknown function DUF58 EL388_RS08540 PF13519 von Willebrand factor type A domain EL388_RS08540 PF07584 Aerotolerance regulator N-terminal EL388_RS08575 PF01435 Peptidase family M48 EL388_RS08580 PF01967 MoaC family EL388_RS08585 PF03781 Sulfatase-modifying factor enzyme 1 EL388_RS08600 PF04358 DsrC like protein EL388_RS08610 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain EL388_RS08610 PF02777 Iron/manganese superoxide dismutases, C-terminal domain EL388_RS08615 PF04055 Radical SAM superfamily EL388_RS08615 PF11842 Domain of unknown function (DUF3362) EL388_RS08615 PF08497 Radical SAM N-terminal EL388_RS08620 PF13230 Glutamine amidotransferases class-II EL388_RS08630 PF00551 Formyl transferase EL388_RS08630 PF01842 ACT domain EL388_RS08635 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EL388_RS08635 PF08447 PAS fold EL388_RS08635 PF13426 PAS domain EL388_RS08640 PF03477 ATP cone domain EL388_RS08640 PF00317 Ribonucleotide reductase, all-alpha domain EL388_RS08640 PF02867 Ribonucleotide reductase, barrel domain EL388_RS08645 PF00268 Ribonucleotide reductase, small chain EL388_RS08665 PF03692 Putative zinc- or iron-chelating domain EL388_RS08670 PF07152 YaeQ protein EL388_RS08680 PF00753 Metallo-beta-lactamase superfamily EL388_RS08685 PF00512 His Kinase A (phospho-acceptor) domain EL388_RS08685 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) EL388_RS08685 PF00672 HAMP domain EL388_RS08685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EL388_RS08685 PF01627 Hpt domain EL388_RS08685 PF00072 Response regulator receiver domain EL388_RS08700 PF13442 Cytochrome C oxidase, cbb3-type, subunit III EL388_RS08700 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP EL388_RS08710 PF17991 Thioredoxin like C-terminal domain EL388_RS08710 PF02683 Cytochrome C biogenesis protein transmembrane region EL388_RS08710 PF00578 AhpC/TSA family EL388_RS08715 PF01734 Patatin-like phospholipase EL388_RS08720 PF00294 pfkB family carbohydrate kinase EL388_RS08735 PF01641 SelR domain EL388_RS08740 PF00485 Phosphoribulokinase / Uridine kinase family EL388_RS08765 PF00437 Type II/IV secretion system protein EL388_RS08785 PF00313 'Cold-shock' DNA-binding domain EL388_RS08790 PF01734 Patatin-like phospholipase EL388_RS08800 PF07687 Peptidase dimerisation domain EL388_RS08800 PF01546 Peptidase family M20/M25/M40 EL388_RS08810 PF01430 Hsp33 protein EL388_RS08815 PF03707 Bacterial signalling protein N terminal repeat EL388_RS08815 PF00990 Diguanylate cyclase, GGDEF domain EL388_RS08815 PF00563 EAL domain EL388_RS08825 PF05430 S-adenosyl-L-methionine-dependent methyltransferase EL388_RS08825 PF01266 FAD dependent oxidoreductase EL388_RS08840 PF13686 DsrE/DsrF/DrsH-like family EL388_RS08845 PF01206 Sulfurtransferase TusA EL388_RS08850 PF00581 Rhodanese-like domain EL388_RS08855 PF02272 DHHA1 domain EL388_RS08855 PF01411 tRNA synthetases class II (A) EL388_RS08855 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain EL388_RS08860 PF03309 Type III pantothenate kinase EL388_RS08865 PF03099 Biotin/lipoate A/B protein ligase family EL388_RS08865 PF02237 Biotin protein ligase C terminal domain EL388_RS08870 PF07963 Prokaryotic N-terminal methylation motif EL388_RS08870 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor EL388_RS08875 PF05567 Neisseria PilC beta-propeller domain EL388_RS08900 PF01266 FAD dependent oxidoreductase EL388_RS08915 PF00348 Polyprenyl synthetase EL388_RS08925 PF00216 Bacterial DNA-binding protein EL388_RS08930 PF13686 DsrE/DsrF/DrsH-like family EL388_RS08935 PF11066 Protein of unknown function (DUF2867) EL388_RS08935 PF13460 NAD(P)H-binding EL388_RS08945 PF01227 GTP cyclohydrolase I EL388_RS08950 PF09997 Predicted membrane protein (DUF2238) EL388_RS08965 PF04055 Radical SAM superfamily EL388_RS08965 PF06969 HemN C-terminal domain EL388_RS08970 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EL388_RS08975 PF01725 Ham1 family EL388_RS08980 PF03725 3' exoribonuclease family, domain 2 EL388_RS08980 PF01138 3' exoribonuclease family, domain 1 EL388_RS08990 PF00805 Pentapeptide repeats (8 copies) EL388_RS08990 PF00069 Protein kinase domain EL388_RS08995 PF03755 YicC-like family, N-terminal region EL388_RS08995 PF08340 Domain of unknown function (DUF1732) EL388_RS09000 PF00589 Phage integrase family EL388_RS09000 PF13356 Arm DNA-binding domain EL388_RS09040 PF00625 Guanylate kinase EL388_RS09045 PF01192 RNA polymerase Rpb6 EL388_RS09050 PF04607 Region found in RelA / SpoT proteins EL388_RS09050 PF02824 TGS domain EL388_RS09050 PF13291 ACT domain EL388_RS09055 PF00563 EAL domain EL388_RS09055 PF03707 Bacterial signalling protein N terminal repeat EL388_RS09055 PF00990 Diguanylate cyclase, GGDEF domain EL388_RS09060 PF01042 Endoribonuclease L-PSP EL388_RS09065 PF17191 RecG wedge domain EL388_RS09065 PF00270 DEAD/DEAH box helicase EL388_RS09065 PF00271 Helicase conserved C-terminal domain EL388_RS09070 PF04345 Chorismate lyase EL388_RS09075 PF01040 UbiA prenyltransferase family EL388_RS09080 PF00994 Probable molybdopterin binding domain EL388_RS09085 PF01966 HD domain EL388_RS09090 PF00535 Glycosyl transferase family 2 EL388_RS09095 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase EL388_RS09100 PF01569 PAP2 superfamily EL388_RS09105 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase EL388_RS09110 PF01569 PAP2 superfamily EL388_RS09120 PF01435 Peptidase family M48 EL388_RS09125 PF00881 Nitroreductase family EL388_RS09130 PF04305 Protein of unknown function (DUF455) EL388_RS09135 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase EL388_RS09145 PF01938 TRAM domain EL388_RS09145 PF05958 tRNA (Uracil-5-)-methyltransferase EL388_RS09150 PF01027 Inhibitor of apoptosis-promoting Bax1 EL388_RS09155 PF13840 ACT domain EL388_RS09155 PF01842 ACT domain EL388_RS09155 PF00696 Amino acid kinase family EL388_RS09175 PF01966 HD domain EL388_RS09175 PF11871 Domain of unknown function (DUF3391) EL388_RS09180 PF00480 ROK family EL388_RS09195 PF01565 FAD binding domain EL388_RS09195 PF02913 FAD linked oxidases, C-terminal domain EL388_RS09200 PF18125 RlmM ferredoxin-like domain EL388_RS09200 PF01728 FtsJ-like methyltransferase EL388_RS09205 PF00543 Nitrogen regulatory protein P-II EL388_RS09210 PF00795 Carbon-nitrogen hydrolase EL388_RS09210 PF02540 NAD synthase EL388_RS09215 PF11897 Protein of unknown function (DUF3417) EL388_RS09215 PF00343 Carbohydrate phosphorylase EL388_RS09220 PF00871 Acetokinase family EL388_RS09225 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase EL388_RS09225 PF09363 XFP C-terminal domain EL388_RS09225 PF09364 XFP N-terminal domain EL388_RS09230 PF00990 Diguanylate cyclase, GGDEF domain EL388_RS09235 PF16326 ABC transporter C-terminal domain EL388_RS09235 PF00005 ABC transporter EL388_RS09235 PF12848 ABC transporter EL388_RS09255 PF06594 Haemolysin-type calcium binding protein related domain EL388_RS09255 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) EL388_RS09280 PF00664 ABC transporter transmembrane region EL388_RS09280 PF00005 ABC transporter EL388_RS09280 PF03412 Peptidase C39 family EL388_RS09285 PF02885 Glycosyl transferase family, helical bundle domain EL388_RS09285 PF00591 Glycosyl transferase family, a/b domain EL388_RS09290 PF00117 Glutamine amidotransferase class-I EL388_RS09295 PF04715 Anthranilate synthase component I, N terminal region EL388_RS09295 PF00425 chorismate binding enzyme EL388_RS09300 PF13419 Haloacid dehalogenase-like hydrolase EL388_RS09305 PF00834 Ribulose-phosphate 3 epimerase family EL388_RS09310 PF04379 ApaG domain EL388_RS09315 PF03551 Transcriptional regulator PadR-like family EL388_RS09315 PF13847 Methyltransferase domain EL388_RS09320 PF03562 MltA specific insert domain EL388_RS09320 PF06725 3D domain EL388_RS09340 PF13098 Thioredoxin-like domain EL388_RS09340 PF10411 Disulfide bond isomerase protein N-terminus EL388_RS09345 PF01494 FAD binding domain EL388_RS09350 PF01494 FAD binding domain EL388_RS09355 PF00557 Metallopeptidase family M24 EL388_RS09355 PF05195 Aminopeptidase P, N-terminal domain EL388_RS09360 PF00483 Nucleotidyl transferase EL388_RS09365 PF01636 Phosphotransferase enzyme family EL388_RS09370 PF04453 LPS transport system D EL388_RS09375 PF09312 SurA N-terminal domain EL388_RS09375 PF00639 PPIC-type PPIASE domain EL388_RS09380 PF04166 Pyridoxal phosphate biosynthetic protein PdxA EL388_RS09385 PF00398 Ribosomal RNA adenine dimethylase EL388_RS09390 PF11871 Domain of unknown function (DUF3391) EL388_RS09390 PF01966 HD domain EL388_RS09395 PF00512 His Kinase A (phospho-acceptor) domain EL388_RS09395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EL388_RS09395 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) EL388_RS09395 PF00072 Response regulator receiver domain EL388_RS09395 PF01627 Hpt domain EL388_RS09395 PF00672 HAMP domain EL388_RS09400 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EL388_RS09420 PF00990 Diguanylate cyclase, GGDEF domain EL388_RS09425 PF02092 Glycyl-tRNA synthetase beta subunit EL388_RS09425 PF05746 DALR anticodon binding domain EL388_RS09430 PF02091 Glycyl-tRNA synthetase alpha subunit EL388_RS09435 PF00512 His Kinase A (phospho-acceptor) domain EL388_RS09435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EL388_RS09435 PF00672 HAMP domain EL388_RS09440 PF00072 Response regulator receiver domain EL388_RS09440 PF00486 Transcriptional regulatory protein, C terminal EL388_RS09455 PF01551 Peptidase family M23 EL388_RS09455 PF10145 Phage-related minor tail protein EL388_RS09455 PF01464 Transglycosylase SLT domain EL388_RS09460 PF00690 Cation transporter/ATPase, N-terminus EL388_RS09460 PF00689 Cation transporting ATPase, C-terminus EL388_RS09465 PF01769 Divalent cation transporter EL388_RS09465 PF03448 MgtE intracellular N domain EL388_RS09465 PF00571 CBS domain EL388_RS09470 PF00633 Helix-hairpin-helix motif EL388_RS09470 PF00730 HhH-GPD superfamily base excision DNA repair protein EL388_RS09470 PF14815 NUDIX domain EL388_RS09480 PF04225 Opacity-associated protein A LysM-like domain EL388_RS09480 PF01551 Peptidase family M23 EL388_RS09485 PF03702 Anhydro-N-acetylmuramic acid kinase EL388_RS09490 PF07072 Cell division protein EL388_RS09495 PF01121 Dephospho-CoA kinase EL388_RS09500 PF06750 Bacterial Peptidase A24 N-terminal domain EL388_RS09500 PF01478 Type IV leader peptidase family EL388_RS09505 PF00482 Type II secretion system (T2SS), protein F EL388_RS09510 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain EL388_RS09510 PF00437 Type II/IV secretion system protein EL388_RS09515 PF01595 Cyclin M transmembrane N-terminal domain EL388_RS09515 PF03471 Transporter associated domain EL388_RS09515 PF00571 CBS domain EL388_RS09545 PF00581 Rhodanese-like domain EL388_RS09550 PF01479 S4 domain EL388_RS09550 PF00579 tRNA synthetases class I (W and Y) EL388_RS09560 PF02597 ThiS family EL388_RS09560 PF05690 Thiazole biosynthesis protein ThiG EL388_RS09565 PF05690 Thiazole biosynthesis protein ThiG EL388_RS09570 PF02390 Putative methyltransferase EL388_RS09575 PF07992 Pyridine nucleotide-disulphide oxidoreductase EL388_RS09585 PF02954 Bacterial regulatory protein, Fis family EL388_RS09585 PF00072 Response regulator receiver domain EL388_RS09585 PF00158 Sigma-54 interaction domain EL388_RS09590 PF03480 Bacterial extracellular solute-binding protein, family 7 EL388_RS09595 PF00034 Cytochrome c EL388_RS09600 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EL388_RS09605 PF00691 OmpA family EL388_RS09620 PF01523 Putative modulator of DNA gyrase EL388_RS09625 PF04751 Protein of unknown function (DUF615) EL388_RS09630 PF04976 DMSO reductase anchor subunit (DmsC) EL388_RS09635 PF12800 4Fe-4S binding domain EL388_RS09635 PF13247 4Fe-4S dicluster domain EL388_RS09640 PF00384 Molybdopterin oxidoreductase EL388_RS09640 PF04879 Molybdopterin oxidoreductase Fe4S4 domain EL388_RS09640 PF01568 Molydopterin dinucleotide binding domain EL388_RS09645 PF00990 Diguanylate cyclase, GGDEF domain EL388_RS09645 PF03707 Bacterial signalling protein N terminal repeat EL388_RS09645 PF00563 EAL domain EL388_RS09650 PF00664 ABC transporter transmembrane region EL388_RS09650 PF00005 ABC transporter EL388_RS09665 PF00873 AcrB/AcrD/AcrF family EL388_RS09695 PF11898 Domain of unknown function (DUF3418) EL388_RS09695 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold EL388_RS09695 PF00270 DEAD/DEAH box helicase EL388_RS09695 PF00271 Helicase conserved C-terminal domain EL388_RS09695 PF04408 Helicase associated domain (HA2) EL388_RS09700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EL388_RS09700 PF00672 HAMP domain EL388_RS09705 PF01066 CDP-alcohol phosphatidyltransferase EL388_RS09710 PF12706 Beta-lactamase superfamily domain EL388_RS09715 PF01026 TatD related DNase EL388_RS09720 PF00999 Sodium/hydrogen exchanger family EL388_RS09730 PF01047 MarR family EL388_RS09735 PF00690 Cation transporter/ATPase, N-terminus EL388_RS09735 PF00689 Cation transporting ATPase, C-terminus EL388_RS09745 PF00999 Sodium/hydrogen exchanger family EL388_RS09745 PF02080 TrkA-C domain EL388_RS09745 PF03471 Transporter associated domain EL388_RS09750 PF00582 Universal stress protein family EL388_RS09755 PF01370 NAD dependent epimerase/dehydratase family EL388_RS09760 PF01743 Poly A polymerase head domain EL388_RS09760 PF12627 Probable RNA and SrmB- binding site of polymerase A EL388_RS09760 PF01966 HD domain EL388_RS09770 PF00291 Pyridoxal-phosphate dependent enzyme EL388_RS09770 PF00585 C-terminal regulatory domain of Threonine dehydratase EL388_RS09775 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) EL388_RS09780 PF00012 Hsp70 protein EL388_RS09785 PF01556 DnaJ C terminal domain EL388_RS09785 PF00226 DnaJ domain EL388_RS09785 PF00684 DnaJ central domain EL388_RS09790 PF16654 Diaminopimelic acid dehydrogenase C-terminal domain EL388_RS09830 PF03884 DNA gyrase inhibitor YacG EL388_RS09835 PF01521 Iron-sulphur cluster biosynthesis EL388_RS09840 PF02774 Semialdehyde dehydrogenase, dimerisation domain EL388_RS09840 PF01118 Semialdehyde dehydrogenase, NAD binding domain EL388_RS09845 PF00380 Ribosomal protein S9/S16 EL388_RS09850 PF00572 Ribosomal protein L13 EL388_RS09855 PF02698 DUF218 domain EL388_RS09860 PF02566 OsmC-like protein EL388_RS09870 PF03232 Ubiquinone biosynthesis protein COQ7 EL388_RS09885 PF02441 Flavoprotein EL388_RS09900 PF03668 P-loop ATPase protein family EL388_RS09905 PF07475 HPr Serine kinase C-terminal domain EL388_RS09905 PF02603 HPr Serine kinase N terminus EL388_RS09910 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EL388_RS09915 PF04552 Sigma-54, DNA binding domain EL388_RS09915 PF00309 Sigma-54 factor, Activator interacting domain (AID) EL388_RS09915 PF04963 Sigma-54 factor, core binding domain EL388_RS09920 PF12399 Branched-chain amino acid ATP-binding cassette transporter EL388_RS09920 PF00005 ABC transporter EL388_RS09925 PF03968 OstA-like protein EL388_RS09940 PF00571 CBS domain EL388_RS09940 PF01380 SIS domain EL388_RS09945 PF00999 Sodium/hydrogen exchanger family EL388_RS09945 PF02080 TrkA-C domain EL388_RS09945 PF02254 TrkA-N domain EL388_RS09950 PF00563 EAL domain EL388_RS09950 PF08668 HDOD domain EL388_RS09955 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ EL388_RS09960 PF02565 Recombination protein O C terminal EL388_RS09960 PF11967 Recombination protein O N terminal EL388_RS09965 PF01926 50S ribosome-binding GTPase EL388_RS09965 PF07650 KH domain EL388_RS09970 PF00035 Double-stranded RNA binding motif EL388_RS09970 PF14622 Ribonuclease-III-like EL388_RS09980 PF10502 Signal peptidase, peptidase S26 EL388_RS09985 PF03144 Elongation factor Tu domain 2 EL388_RS09985 PF00009 Elongation factor Tu GTP binding domain EL388_RS09985 PF06421 GTP-binding protein LepA C-terminus EL388_RS09985 PF00679 Elongation factor G C-terminus EL388_RS09995 PF13180 PDZ domain EL388_RS10005 PF03888 MucB/RseB N-terminal domain EL388_RS10005 PF17188 MucB/RseB C-terminal domain EL388_RS10015 PF04542 Sigma-70 region 2 EL388_RS10015 PF08281 Sigma-70, region 4 EL388_RS10020 PF02910 Fumarate reductase flavoprotein C-term EL388_RS10020 PF00890 FAD binding domain EL388_RS10025 PF00883 Cytosol aminopeptidase family, catalytic domain EL388_RS10025 PF02789 Cytosol aminopeptidase family, N-terminal domain EL388_RS10030 PF03739 Lipopolysaccharide export system permease LptF/LptG EL388_RS10040 PF06271 RDD family EL388_RS10045 PF00829 Ribosomal prokaryotic L21 protein EL388_RS10050 PF01016 Ribosomal L27 protein EL388_RS10055 PF01926 50S ribosome-binding GTPase EL388_RS10055 PF01018 GTP1/OBG EL388_RS10060 PF00696 Amino acid kinase family EL388_RS10060 PF01472 PUA domain EL388_RS10065 PF11799 impB/mucB/samB family C-terminal domain EL388_RS10065 PF00817 impB/mucB/samB family EL388_RS10065 PF11798 IMS family HHH motif EL388_RS10080 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EL388_RS10095 PF00578 AhpC/TSA family EL388_RS10105 PF13677 Membrane MotB of proton-channel complex MotA/MotB EL388_RS10105 PF00691 OmpA family EL388_RS10110 PF01618 MotA/TolQ/ExbB proton channel family EL388_RS10115 PF04539 Sigma-70 region 3 EL388_RS10115 PF04545 Sigma-70, region 4 EL388_RS10115 PF04542 Sigma-70 region 2 EL388_RS10125 PF00448 SRP54-type protein, GTPase domain EL388_RS10130 PF00771 FHIPEP family EL388_RS10135 PF01312 FlhB HrpN YscU SpaS Family EL388_RS10145 PF00004 ATPase family associated with various cellular activities (AAA) EL388_RS10145 PF07724 AAA domain (Cdc48 subfamily) EL388_RS10145 PF10431 C-terminal, D2-small domain, of ClpB protein EL388_RS10150 PF00561 alpha/beta hydrolase fold EL388_RS10155 PF07021 Methionine biosynthesis protein MetW EL388_RS10155 PF00561 alpha/beta hydrolase fold EL388_RS10180 PF13614 AAA domain EL388_RS10195 PF01381 Helix-turn-helix EL388_RS10205 PF00849 RNA pseudouridylate synthase EL388_RS10210 PF00990 Diguanylate cyclase, GGDEF domain EL388_RS10210 PF08448 PAS fold EL388_RS10225 PF01636 Phosphotransferase enzyme family EL388_RS10235 PF03641 Possible lysine decarboxylase EL388_RS10240 PF01612 3'-5' exonuclease EL388_RS10240 PF01367 5'-3' exonuclease, C-terminal SAM fold EL388_RS10240 PF00476 DNA polymerase family A EL388_RS10240 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain EL388_RS10245 PF00072 Response regulator receiver domain EL388_RS10255 PF07238 PilZ domain EL388_RS10260 PF01219 Prokaryotic diacylglycerol kinase EL388_RS10265 PF02347 Glycine cleavage system P-protein EL388_RS10270 PF08534 Redoxin EL388_RS10275 PF02347 Glycine cleavage system P-protein EL388_RS10280 PF01597 Glycine cleavage H-protein EL388_RS10285 PF01571 Aminomethyltransferase folate-binding domain EL388_RS10285 PF08669 Glycine cleavage T-protein C-terminal barrel domain EL388_RS10290 PF04055 Radical SAM superfamily EL388_RS10305 PF02785 Biotin carboxylase C-terminal domain EL388_RS10305 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EL388_RS10305 PF00289 Biotin carboxylase, N-terminal domain EL388_RS10310 PF00364 Biotin-requiring enzyme EL388_RS10315 PF01220 Dehydroquinase class II EL388_RS10350 PF00535 Glycosyl transferase family 2 EL388_RS10375 PF01769 Divalent cation transporter EL388_RS10375 PF03448 MgtE intracellular N domain EL388_RS10375 PF00571 CBS domain EL388_RS10380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EL388_RS10380 PF08447 PAS fold EL388_RS10385 PF00912 Transglycosylase EL388_RS10390 PF08501 Shikimate dehydrogenase substrate binding domain EL388_RS10390 PF18317 Shikimate 5'-dehydrogenase C-terminal domain EL388_RS10390 PF01488 Shikimate / quinate 5-dehydrogenase EL388_RS10395 PF00120 Glutamine synthetase, catalytic domain EL388_RS10395 PF03951 Glutamine synthetase, beta-Grasp domain EL388_RS10405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EL388_RS10405 PF00512 His Kinase A (phospho-acceptor) domain EL388_RS10405 PF00989 PAS fold EL388_RS10410 PF02954 Bacterial regulatory protein, Fis family EL388_RS10410 PF00158 Sigma-54 interaction domain EL388_RS10410 PF00072 Response regulator receiver domain EL388_RS10425 PF04384 Iron-sulphur cluster assembly EL388_RS10430 PF00111 2Fe-2S iron-sulfur cluster binding domain EL388_RS10440 PF00012 Hsp70 protein EL388_RS10445 PF07743 HSCB C-terminal oligomerisation domain EL388_RS10450 PF01521 Iron-sulphur cluster biosynthesis EL388_RS10455 PF01592 NifU-like N terminal domain EL388_RS10460 PF00266 Aminotransferase class-V EL388_RS10465 PF02082 Transcriptional regulator EL388_RS10470 PF00132 Bacterial transferase hexapeptide (six repeats) EL388_RS10475 PF00588 SpoU rRNA Methylase family EL388_RS10480 PF00459 Inositol monophosphatase family EL388_RS10485 PF00990 Diguanylate cyclase, GGDEF domain EL388_RS10485 PF00072 Response regulator receiver domain EL388_RS10490 PF00488 MutS domain V EL388_RS10490 PF05190 MutS family domain IV EL388_RS10490 PF05192 MutS domain III EL388_RS10490 PF05188 MutS domain II EL388_RS10490 PF01624 MutS domain I EL388_RS10530 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system EL388_RS10535 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system EL388_RS10540 PF00361 Proton-conducting membrane transporter EL388_RS10545 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus EL388_RS10545 PF00361 Proton-conducting membrane transporter EL388_RS10550 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus EL388_RS10550 PF00361 Proton-conducting membrane transporter EL388_RS10555 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L EL388_RS10560 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 EL388_RS10565 PF12838 4Fe-4S dicluster domain EL388_RS10570 PF00146 NADH dehydrogenase EL388_RS10575 PF00384 Molybdopterin oxidoreductase EL388_RS10575 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region EL388_RS10575 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal EL388_RS10580 PF10531 SLBB domain EL388_RS10580 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region EL388_RS10580 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit EL388_RS10590 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit EL388_RS10595 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit EL388_RS10600 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit EL388_RS10605 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 EL388_RS10615 PF03840 Preprotein translocase SecG subunit EL388_RS10620 PF00121 Triosephosphate isomerase EL388_RS10630 PF00224 Pyruvate kinase, barrel domain EL388_RS10630 PF02887 Pyruvate kinase, alpha/beta domain EL388_RS10635 PF00005 ABC transporter EL388_RS10640 PF00528 Binding-protein-dependent transport system inner membrane component EL388_RS10645 PF00528 Binding-protein-dependent transport system inner membrane component EL388_RS10650 PF12849 PBP superfamily domain EL388_RS10660 PF13439 Glycosyltransferase Family 4 EL388_RS10660 PF00534 Glycosyl transferases group 1 EL388_RS10665 PF13439 Glycosyltransferase Family 4 EL388_RS10665 PF00534 Glycosyl transferases group 1 EL388_RS10675 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EL388_RS10675 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EL388_RS10675 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EL388_RS10675 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EL388_RS10680 PF00809 Pterin binding enzyme EL388_RS10685 PF01434 Peptidase family M41 EL388_RS10685 PF17862 AAA+ lid domain EL388_RS10685 PF00004 ATPase family associated with various cellular activities (AAA) EL388_RS10685 PF06480 FtsH Extracellular EL388_RS10690 PF01728 FtsJ-like methyltransferase EL388_RS10695 PF01985 CRS1 / YhbY (CRM) domain EL388_RS10705 PF03449 Transcription elongation factor, N-terminal EL388_RS10705 PF01272 Transcription elongation factor, GreA/GreB, C-term EL388_RS10710 PF02142 MGS-like domain EL388_RS10710 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EL388_RS10710 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain EL388_RS10715 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain EL388_RS10715 PF00117 Glutamine amidotransferase class-I EL388_RS10750 PF00465 Iron-containing alcohol dehydrogenase EL388_RS10755 PF02631 RecX family EL388_RS10760 PF00154 recA bacterial DNA recombination protein EL388_RS10770 PF02464 Competence-damaged protein EL388_RS10775 PF04608 Phosphatidylglycerophosphatase A EL388_RS10780 PF00586 AIR synthase related protein, N-terminal domain EL388_RS10780 PF02769 AIR synthase related protein, C-terminal domain EL388_RS10785 PF01029 NusB family EL388_RS10790 PF00885 6,7-dimethyl-8-ribityllumazine synthase EL388_RS10795 PF00925 GTP cyclohydrolase II EL388_RS10795 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase EL388_RS10800 PF00677 Lumazine binding domain EL388_RS10805 PF01872 RibD C-terminal domain EL388_RS10805 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region EL388_RS10810 PF03477 ATP cone domain EL388_RS10815 PF00464 Serine hydroxymethyltransferase EL388_RS10820 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EL388_RS10825 PF00873 AcrB/AcrD/AcrF family EL388_RS10840 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus EL388_RS10840 PF00361 Proton-conducting membrane transporter EL388_RS10845 PF00361 Proton-conducting membrane transporter EL388_RS10850 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus EL388_RS10850 PF00361 Proton-conducting membrane transporter EL388_RS10855 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) EL388_RS10860 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus EL388_RS10860 PF00361 Proton-conducting membrane transporter EL388_RS10865 PF01740 STAS domain EL388_RS10865 PF00916 Sulfate permease family EL388_RS10870 PF02954 Bacterial regulatory protein, Fis family EL388_RS10870 PF00072 Response regulator receiver domain EL388_RS10870 PF00158 Sigma-54 interaction domain EL388_RS10875 PF00512 His Kinase A (phospho-acceptor) domain EL388_RS10875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EL388_RS10885 PF01740 STAS domain EL388_RS10885 PF00916 Sulfate permease family EL388_RS10890 PF00571 CBS domain EL388_RS10890 PF01743 Poly A polymerase head domain EL388_RS10910 PF00027 Cyclic nucleotide-binding domain EL388_RS10910 PF13302 Acetyltransferase (GNAT) domain EL388_RS10930 PF00027 Cyclic nucleotide-binding domain EL388_RS10930 PF13545 Crp-like helix-turn-helix domain EL388_RS10940 PF03741 Integral membrane protein TerC family EL388_RS10945 PF01435 Peptidase family M48 EL388_RS10950 PF03466 LysR substrate binding domain EL388_RS10950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EL388_RS10980 PF13614 AAA domain EL388_RS10995 PF00936 BMC domain EL388_RS11000 PF00936 BMC domain EL388_RS11005 PF00936 BMC domain EL388_RS11030 PF03466 LysR substrate binding domain EL388_RS11030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EL388_RS11045 PF00092 von Willebrand factor type A domain EL388_RS11055 PF08406 CbbQ/NirQ/NorQ C-terminal EL388_RS11055 PF07728 AAA domain (dynein-related subfamily) EL388_RS11060 PF00101 Ribulose bisphosphate carboxylase, small chain EL388_RS11065 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain EL388_RS11065 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain EL388_RS11070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EL388_RS11070 PF03466 LysR substrate binding domain EL388_RS11075 PF00092 von Willebrand factor type A domain EL388_RS11080 PF08406 CbbQ/NirQ/NorQ C-terminal EL388_RS11080 PF07728 AAA domain (dynein-related subfamily) EL388_RS11085 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain EL388_RS11085 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain EL388_RS11090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EL388_RS11090 PF03466 LysR substrate binding domain EL388_RS11095 PF01029 NusB family EL388_RS11095 PF01189 16S rRNA methyltransferase RsmB/F EL388_RS11100 PF13091 PLD-like domain EL388_RS11105 PF00924 Mechanosensitive ion channel EL388_RS11120 PF00471 Ribosomal protein L33 EL388_RS11125 PF00830 Ribosomal L28 family EL388_RS11130 PF04002 RadC-like JAB domain EL388_RS11135 PF02441 Flavoprotein EL388_RS11135 PF04127 DNA / pantothenate metabolism flavoprotein EL388_RS11140 PF00692 dUTPase EL388_RS11150 PF02310 B12 binding domain EL388_RS11150 PF00809 Pterin binding enzyme EL388_RS11150 PF02965 Vitamin B12 dependent methionine synthase, activation domain EL388_RS11150 PF02607 B12 binding domain EL388_RS11150 PF02574 Homocysteine S-methyltransferase EL388_RS11170 PF00795 Carbon-nitrogen hydrolase EL388_RS11175 PF01523 Putative modulator of DNA gyrase EL388_RS11185 PF00793 DAHP synthetase I family EL388_RS11195 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding EL388_RS11195 PF12169 DNA polymerase III subunits gamma and tau domain III EL388_RS11195 PF12170 DNA polymerase III tau subunit V interacting with alpha EL388_RS11200 PF02575 YbaB/EbfC DNA-binding family EL388_RS11205 PF02132 RecR protein EL388_RS11205 PF13662 Toprim domain EL388_RS11220 PF08328 Adenylosuccinate lyase C-terminal EL388_RS11220 PF00206 Lyase EL388_RS11225 PF00085 Thioredoxin EL388_RS11235 PF00132 Bacterial transferase hexapeptide (six repeats) EL388_RS11240 PF00311 Phosphoenolpyruvate carboxylase EL388_RS11265 PF01432 Peptidase family M3 EL388_RS11280 PF03477 ATP cone domain EL388_RS11280 PF02867 Ribonucleotide reductase, barrel domain EL388_RS11280 PF00317 Ribonucleotide reductase, all-alpha domain EL388_RS11295 PF00596 Class II Aldolase and Adducin N-terminal domain EL388_RS11300 PF01008 Initiation factor 2 subunit family EL388_RS11310 PF03109 ABC1 family EL388_RS11320 PF04480 Protein of unknown function (DUF559) EL388_RS11335 PF01202 Shikimate kinase EL388_RS11345 PF07516 SecA Wing and Scaffold domain EL388_RS11345 PF01043 SecA preprotein cross-linking domain EL388_RS11345 PF02810 SEC-C motif EL388_RS11345 PF07517 SecA DEAD-like domain EL388_RS11370 PF07992 Pyridine nucleotide-disulphide oxidoreductase EL388_RS11375 PF02719 Polysaccharide biosynthesis protein EL388_RS11380 PF02397 Bacterial sugar transferase EL388_RS11385 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family EL388_RS11390 PF02911 Formyl transferase, C-terminal domain EL388_RS11390 PF00551 Formyl transferase EL388_RS11395 PF02350 UDP-N-acetylglucosamine 2-epimerase EL388_RS11400 PF03102 NeuB family EL388_RS11400 PF08666 SAF domain EL388_RS11410 PF02348 Cytidylyltransferase EL388_RS11420 PF00117 Glutamine amidotransferase class-I EL388_RS11425 PF00977 Histidine biosynthesis protein EL388_RS11440 PF00535 Glycosyl transferase family 2 EL388_RS11450 PF05159 Capsule polysaccharide biosynthesis protein EL388_RS11500 PF00596 Class II Aldolase and Adducin N-terminal domain EL388_RS11520 PF02348 Cytidylyltransferase EL388_RS11525 PF08666 SAF domain EL388_RS11525 PF03102 NeuB family EL388_RS11535 PF13580 SIS domain EL388_RS11540 PF16363 GDP-mannose 4,6 dehydratase EL388_RS11545 PF01370 NAD dependent epimerase/dehydratase family EL388_RS11550 PF02357 Transcription termination factor nusG EL388_RS11560 PF02321 Outer membrane efflux protein EL388_RS11565 PF00581 Rhodanese-like domain EL388_RS11575 PF00689 Cation transporting ATPase, C-terminus EL388_RS11575 PF00690 Cation transporter/ATPase, N-terminus EL388_RS11580 PF01964 Radical SAM ThiC family EL388_RS11580 PF13667 ThiC-associated domain EL388_RS11585 PF00654 Voltage gated chloride channel EL388_RS11595 PF00156 Phosphoribosyl transferase domain EL388_RS11600 PF02673 Bacitracin resistance protein BacA EL388_RS11605 PF01627 Hpt domain EL388_RS11605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EL388_RS11605 PF02895 Signal transducing histidine kinase, homodimeric domain EL388_RS11605 PF01584 CheW-like domain EL388_RS11610 PF00301 Rubredoxin EL388_RS11615 PF08543 Phosphomethylpyrimidine kinase EL388_RS11620 PF02581 Thiamine monophosphate synthase EL388_RS11625 PF00202 Aminotransferase class-III EL388_RS11635 PF13442 Cytochrome C oxidase, cbb3-type, subunit III EL388_RS11640 PF01926 50S ribosome-binding GTPase EL388_RS11645 PF00490 Delta-aminolevulinic acid dehydratase EL388_RS11650 PF07238 PilZ domain EL388_RS11650 PF07317 Flagellar regulator YcgR EL388_RS11655 PF07238 PilZ domain EL388_RS11655 PF07317 Flagellar regulator YcgR EL388_RS11665 PF00905 Penicillin binding protein transpeptidase domain EL388_RS11665 PF00912 Transglycosylase EL388_RS11665 PF17092 Penicillin-binding protein OB-like domain EL388_RS11670 PF11104 Type IV pilus assembly protein PilM; EL388_RS11680 PF04350 Pilus assembly protein, PilO EL388_RS11690 PF00263 Bacterial type II and III secretion system protein EL388_RS11690 PF11741 AMIN domain EL388_RS11690 PF07660 Secretin and TonB N terminus short domain EL388_RS11690 PF03958 Bacterial type II/III secretion system short domain EL388_RS11700 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase EL388_RS11705 PF12327 FtsZ family, C-terminal domain EL388_RS11705 PF00091 Tubulin/FtsZ family, GTPase domain EL388_RS11710 PF02491 SHS2 domain inserted in FTSA EL388_RS11715 PF08478 POTRA domain, FtsQ-type EL388_RS11715 PF03799 Cell division protein FtsQ EL388_RS11720 PF07478 D-ala D-ala ligase C-terminus EL388_RS11720 PF01820 D-ala D-ala ligase N-terminus EL388_RS11725 PF01565 FAD binding domain EL388_RS11725 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain EL388_RS11730 PF02875 Mur ligase family, glutamate ligase domain EL388_RS11730 PF01225 Mur ligase family, catalytic domain EL388_RS11730 PF08245 Mur ligase middle domain EL388_RS11735 PF04101 Glycosyltransferase family 28 C-terminal domain EL388_RS11735 PF03033 Glycosyltransferase family 28 N-terminal domain EL388_RS11740 PF01098 Cell cycle protein EL388_RS11745 PF02875 Mur ligase family, glutamate ligase domain EL388_RS11745 PF08245 Mur ligase middle domain EL388_RS11750 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 EL388_RS11750 PF00953 Glycosyl transferase family 4 EL388_RS11755 PF01225 Mur ligase family, catalytic domain EL388_RS11755 PF08245 Mur ligase middle domain EL388_RS11755 PF02875 Mur ligase family, glutamate ligase domain EL388_RS11760 PF08245 Mur ligase middle domain EL388_RS11760 PF01225 Mur ligase family, catalytic domain EL388_RS11760 PF02875 Mur ligase family, glutamate ligase domain EL388_RS11765 PF00905 Penicillin binding protein transpeptidase domain EL388_RS11765 PF03717 Penicillin-binding Protein dimerisation domain EL388_RS11770 PF04999 Cell division protein FtsL EL388_RS11775 PF01795 MraW methylase family EL388_RS11780 PF02381 MraZ protein, putative antitoxin-like EL388_RS11790 PF01979 Amidohydrolase family EL388_RS11795 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EL388_RS11800 PF02021 Uncharacterised protein family UPF0102 EL388_RS11805 PF13580 SIS domain EL388_RS11810 PF04972 BON domain EL388_RS11815 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase EL388_RS11825 PF00581 Rhodanese-like domain EL388_RS11830 PF01263 Aldose 1-epimerase EL388_RS11835 PF00920 Dehydratase family EL388_RS11840 PF00512 His Kinase A (phospho-acceptor) domain EL388_RS11840 PF00672 HAMP domain EL388_RS11840 PF01627 Hpt domain EL388_RS11840 PF00072 Response regulator receiver domain EL388_RS11840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EL388_RS11840 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) EL388_RS11850 PF01790 Prolipoprotein diacylglyceryl transferase EL388_RS11870 PF01381 Helix-turn-helix EL388_RS11870 PF13521 AAA domain EL388_RS11875 PF06114 IrrE N-terminal-like domain EL388_RS11895 PF02796 Helix-turn-helix domain of resolvase EL388_RS11895 PF00239 Resolvase, N terminal domain EL388_RS11970 PF01555 DNA methylase EL388_RS11975 PF01555 DNA methylase EL388_RS11975 PF18755 Restriction Enzyme Adenine Methylase Associated EL388_RS12025 PF01343 Peptidase family S49 EL388_RS12145 PF18766 SWI2/SNF2 ATPase EL388_RS12145 PF11867 Domain of unknown function (DUF3387) EL388_RS12145 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) EL388_RS12155 PF12161 HsdM N-terminal domain EL388_RS12155 PF02384 N-6 DNA Methylase EL388_RS12170 PF00873 AcrB/AcrD/AcrF family EL388_RS12175 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EL388_RS12175 PF00529 HlyD membrane-fusion protein of T1SS EL388_RS12180 PF02321 Outer membrane efflux protein EL388_RS12195 PF00512 His Kinase A (phospho-acceptor) domain EL388_RS12195 PF00672 HAMP domain EL388_RS12195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EL388_RS12200 PF00072 Response regulator receiver domain EL388_RS12200 PF00486 Transcriptional regulatory protein, C terminal EL388_RS12205 PF00394 Multicopper oxidase EL388_RS12205 PF07731 Multicopper oxidase EL388_RS12205 PF07732 Multicopper oxidase EL388_RS12210 PF05275 Copper resistance protein B precursor (CopB) EL388_RS12235 PF11525 Copper resistance protein K EL388_RS12255 PF14667 Polysaccharide biosynthesis C-terminal domain EL388_RS12255 PF01943 Polysaccharide biosynthesis protein EL388_RS12265 PF00535 Glycosyl transferase family 2 EL388_RS12275 PF00534 Glycosyl transferases group 1 EL388_RS12275 PF13439 Glycosyltransferase Family 4 EL388_RS12280 PF00534 Glycosyl transferases group 1 EL388_RS12280 PF13439 Glycosyltransferase Family 4 EL388_RS12290 PF00535 Glycosyl transferase family 2 EL388_RS12300 PF13439 Glycosyltransferase Family 4 EL388_RS12300 PF00534 Glycosyl transferases group 1 EL388_RS12310 PF16363 GDP-mannose 4,6 dehydratase EL388_RS12335 PF13614 AAA domain EL388_RS12335 PF13807 G-rich domain on putative tyrosine kinase EL388_RS12335 PF02706 Chain length determinant protein EL388_RS12340 PF10531 SLBB domain EL388_RS12340 PF02563 Polysaccharide biosynthesis/export protein EL388_RS12340 PF18412 Outer-membrane lipoprotein Wza C-terminal domain EL388_RS12350 PF00953 Glycosyl transferase family 4 EL388_RS12355 PF00072 Response regulator receiver domain EL388_RS12355 PF00990 Diguanylate cyclase, GGDEF domain EL388_RS12355 PF00563 EAL domain EL388_RS12365 PF11953 Domain of unknown function (DUF3470) EL388_RS12365 PF00037 4Fe-4S binding domain EL388_RS12370 PF00085 Thioredoxin EL388_RS12375 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EL388_RS12375 PF07498 Rho termination factor, N-terminal domain EL388_RS12375 PF07497 Rho termination factor, RNA-binding domain EL388_RS12385 PF00005 ABC transporter EL388_RS12385 PF12848 ABC transporter EL388_RS12390 PF08448 PAS fold EL388_RS12390 PF00563 EAL domain EL388_RS12390 PF00990 Diguanylate cyclase, GGDEF domain EL388_RS12390 PF08447 PAS fold EL388_RS12400 PF00696 Amino acid kinase family EL388_RS12400 PF00583 Acetyltransferase (GNAT) family EL388_RS12405 PF04452 RNA methyltransferase EL388_RS12415 PF00459 Inositol monophosphatase family EL388_RS12420 PF02779 Transketolase, pyrimidine binding domain EL388_RS12420 PF00456 Transketolase, thiamine diphosphate binding domain EL388_RS12420 PF02780 Transketolase, C-terminal domain EL388_RS12425 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain EL388_RS12425 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain EL388_RS12430 PF00162 Phosphoglycerate kinase EL388_RS12435 PF00224 Pyruvate kinase, barrel domain EL388_RS12435 PF02887 Pyruvate kinase, alpha/beta domain EL388_RS12440 PF01116 Fructose-bisphosphate aldolase class-II EL388_RS12445 PF01259 SAICAR synthetase EL388_RS12450 PF00990 Diguanylate cyclase, GGDEF domain EL388_RS12450 PF00563 EAL domain EL388_RS12450 PF03707 Bacterial signalling protein N terminal repeat EL388_RS12455 PF01170 Putative RNA methylase family UPF0020 EL388_RS12455 PF02926 THUMP domain EL388_RS12460 PF08534 Redoxin EL388_RS12465 PF02424 ApbE family EL388_RS12470 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain EL388_RS12470 PF02951 Prokaryotic glutathione synthetase, N-terminal domain EL388_RS12485 PF13401 AAA domain EL388_RS12485 PF01471 Putative peptidoglycan binding domain EL388_RS12490 PF00263 Bacterial type II and III secretion system protein EL388_RS12490 PF03958 Bacterial type II/III secretion system short domain EL388_RS12540 PF07963 Prokaryotic N-terminal methylation motif EL388_RS12545 PF00482 Type II secretion system (T2SS), protein F EL388_RS12550 PF00437 Type II/IV secretion system protein EL388_RS12550 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain EL388_RS12555 PF00588 SpoU rRNA Methylase family EL388_RS12560 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus EL388_RS12560 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus EL388_RS12565 PF02556 Preprotein translocase subunit SecB EL388_RS12570 PF00462 Glutaredoxin EL388_RS12575 PF12368 Rhodanase C-terminal EL388_RS12575 PF00581 Rhodanese-like domain EL388_RS12575 PF17773 UPF0176 acylphosphatase like domain EL388_RS12585 PF00873 AcrB/AcrD/AcrF family EL388_RS12590 PF13533 Biotin-lipoyl like EL388_RS12605 PF01676 Metalloenzyme superfamily EL388_RS12605 PF06415 BPG-independent PGAM N-terminus (iPGM_N) EL388_RS12610 PF01551 Peptidase family M23 EL388_RS12615 PF13180 PDZ domain EL388_RS12615 PF03572 Peptidase family S41 EL388_RS12625 PF00899 ThiF family EL388_RS12635 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster EL388_RS12635 PF07992 Pyridine nucleotide-disulphide oxidoreductase EL388_RS12640 PF01493 GXGXG motif EL388_RS12640 PF01645 Conserved region in glutamate synthase EL388_RS12640 PF00310 Glutamine amidotransferases class-II EL388_RS12640 PF04898 Glutamate synthase central domain EL388_RS12650 PF00462 Glutaredoxin EL388_RS12655 PF17200 Single Cache domain 2 EL388_RS12655 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EL388_RS12655 PF00672 HAMP domain EL388_RS12665 PF00072 Response regulator receiver domain EL388_RS12670 PF09078 CheY binding EL388_RS12670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EL388_RS12670 PF01584 CheW-like domain EL388_RS12670 PF01627 Hpt domain EL388_RS12670 PF02895 Signal transducing histidine kinase, homodimeric domain EL388_RS12675 PF01584 CheW-like domain EL388_RS12680 PF08447 PAS fold EL388_RS12680 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EL388_RS12680 PF08447 PAS fold EL388_RS12680 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EL388_RS12695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EL388_RS12695 PF00672 HAMP domain EL388_RS12695 PF02203 Tar ligand binding domain homologue EL388_RS12700 PF01739 CheR methyltransferase, SAM binding domain EL388_RS12700 PF03705 CheR methyltransferase, all-alpha domain EL388_RS12705 PF03975 CheD chemotactic sensory transduction EL388_RS12710 PF01339 CheB methylesterase EL388_RS12710 PF00072 Response regulator receiver domain EL388_RS12715 PF13466 STAS domain EL388_RS12720 PF00072 Response regulator receiver domain EL388_RS12720 PF00486 Transcriptional regulatory protein, C terminal EL388_RS12725 PF02896 PEP-utilising enzyme, TIM barrel domain EL388_RS12725 PF00391 PEP-utilising enzyme, mobile domain EL388_RS12725 PF05524 PEP-utilising enzyme, N-terminal EL388_RS12730 PF00381 PTS HPr component phosphorylation site EL388_RS12735 PF03610 PTS system fructose IIA component EL388_RS12735 PF03830 PTS system sorbose subfamily IIB component EL388_RS12745 PF01565 FAD binding domain EL388_RS12745 PF02913 FAD linked oxidases, C-terminal domain EL388_RS12750 PF00440 Bacterial regulatory proteins, tetR family EL388_RS12760 PF01571 Aminomethyltransferase folate-binding domain EL388_RS12765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EL388_RS12765 PF00512 His Kinase A (phospho-acceptor) domain EL388_RS12765 PF00672 HAMP domain EL388_RS12765 PF01627 Hpt domain EL388_RS12765 PF00072 Response regulator receiver domain EL388_RS12765 PF17149 Periplasmic sensor domain found in signal transduction proteins EL388_RS12770 PF08029 HisG, C-terminal domain EL388_RS12770 PF01634 ATP phosphoribosyltransferase EL388_RS12775 PF03471 Transporter associated domain EL388_RS12775 PF00571 CBS domain EL388_RS12780 PF02130 Uncharacterized protein family UPF0054 EL388_RS12785 PF02562 PhoH-like protein EL388_RS12790 PF00919 Uncharacterized protein family UPF0004 EL388_RS12790 PF01938 TRAM domain EL388_RS12790 PF04055 Radical SAM superfamily EL388_RS12805 PF02628 Cytochrome oxidase assembly protein EL388_RS12810 PF00749 tRNA synthetases class I (E and Q), catalytic domain EL388_RS12815 PF00005 ABC transporter EL388_RS12815 PF00664 ABC transporter transmembrane region EL388_RS12825 PF05164 Cell division protein ZapA EL388_RS12835 PF01812 5-formyltetrahydrofolate cyclo-ligase family EL388_RS12840 PF00005 ABC transporter EL388_RS12845 PF12399 Branched-chain amino acid ATP-binding cassette transporter EL388_RS12845 PF00005 ABC transporter EL388_RS12850 PF02653 Branched-chain amino acid transport system / permease component EL388_RS12850 PF11862 Domain of unknown function (DUF3382) EL388_RS12855 PF02653 Branched-chain amino acid transport system / permease component EL388_RS12860 PF13458 Periplasmic binding protein EL388_RS12865 PF00034 Cytochrome c EL388_RS12870 PF00202 Aminotransferase class-III EL388_RS12875 PF02446 4-alpha-glucanotransferase EL388_RS12880 PF00034 Cytochrome c EL388_RS12880 PF03150 Di-haem cytochrome c peroxidase EL388_RS12880 PF14376 Haem-binding domain EL388_RS12895 PF00166 Chaperonin 10 Kd subunit EL388_RS12900 PF00118 TCP-1/cpn60 chaperonin family EL388_RS12905 PF07715 TonB-dependent Receptor Plug Domain EL388_RS12905 PF00593 TonB dependent receptor EL388_RS12915 PF00512 His Kinase A (phospho-acceptor) domain EL388_RS12915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EL388_RS12915 PF00072 Response regulator receiver domain EL388_RS12915 PF00989 PAS fold EL388_RS12915 PF00497 Bacterial extracellular solute-binding proteins, family 3 EL388_RS12915 PF01627 Hpt domain EL388_RS12920 PF01557 Fumarylacetoacetate (FAA) hydrolase family EL388_RS12930 PF00266 Aminotransferase class-V EL388_RS12955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EL388_RS12955 PF11808 Phosphate regulon sensor protein PhoR EL388_RS12955 PF00989 PAS fold EL388_RS12955 PF00512 His Kinase A (phospho-acceptor) domain EL388_RS12960 PF00486 Transcriptional regulatory protein, C terminal EL388_RS12960 PF00072 Response regulator receiver domain EL388_RS12970 PF05114 Protein of unknown function (DUF692) EL388_RS12990 PF07681 DoxX EL388_RS12995 PF00011 Hsp20/alpha crystallin family EL388_RS13000 PF00696 Amino acid kinase family EL388_RS13020 PF01925 Sulfite exporter TauE/SafE EL388_RS13030 PF00437 Type II/IV secretion system protein EL388_RS13035 PF01168 Alanine racemase, N-terminal domain EL388_RS13040 PF14748 Pyrroline-5-carboxylate reductase dimerisation EL388_RS13040 PF03807 NADP oxidoreductase coenzyme F420-dependent EL388_RS13045 PF02325 YGGT family EL388_RS13050 PF02594 Uncharacterised ACR, YggU family COG1872 EL388_RS13055 PF10150 Ribonuclease E/G family EL388_RS13055 PF00575 S1 RNA binding domain EL388_RS13060 PF02545 Maf-like protein EL388_RS13065 PF02590 Predicted SPOUT methyltransferase EL388_RS13070 PF00909 Ammonium Transporter Family EL388_RS13075 PF00543 Nitrogen regulatory protein P-II EL388_RS13085 PF04380 Membrane fusogenic activity EL388_RS13090 PF01435 Peptidase family M48 EL388_RS13095 PF13335 Magnesium chelatase, subunit ChlI C-terminal EL388_RS13095 PF01078 Magnesium chelatase, subunit ChlI EL388_RS13155 PF01078 Magnesium chelatase, subunit ChlI EL388_RS13155 PF13335 Magnesium chelatase, subunit ChlI C-terminal EL388_RS13175 PF02219 Methylenetetrahydrofolate reductase EL388_RS13185 PF17657 Bacterial DNA polymerase III alpha subunit finger domain EL388_RS13185 PF11490 DNA polymerase III polC-type N-terminus II EL388_RS13185 PF14480 DNA polymerase III polC-type N-terminus I EL388_RS13185 PF07733 Bacterial DNA polymerase III alpha NTPase domain EL388_RS13185 PF14579 Helix-hairpin-helix motif EL388_RS13185 PF00929 Exonuclease EL388_RS13185 PF02811 PHP domain EL388_RS13195 PF00474 Sodium:solute symporter family EL388_RS13210 PF01208 Uroporphyrinogen decarboxylase (URO-D) EL388_RS13215 PF00270 DEAD/DEAH box helicase EL388_RS13215 PF00271 Helicase conserved C-terminal domain EL388_RS13220 PF01479 S4 domain EL388_RS13220 PF01728 FtsJ-like methyltransferase EL388_RS13225 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain EL388_RS13225 PF05221 S-adenosyl-L-homocysteine hydrolase EL388_RS13235 PF01435 Peptidase family M48 EL388_RS13245 PF00438 S-adenosylmethionine synthetase, N-terminal domain EL388_RS13245 PF02772 S-adenosylmethionine synthetase, central domain EL388_RS13245 PF02773 S-adenosylmethionine synthetase, C-terminal domain EL388_RS13255 PF03279 Bacterial lipid A biosynthesis acyltransferase EL388_RS13260 PF00583 Acetyltransferase (GNAT) family EL388_RS13265 PF13380 CoA binding domain EL388_RS13270 PF01678 Diaminopimelate epimerase EL388_RS13280 PF02899 Phage integrase, N-terminal SAM-like domain EL388_RS13280 PF00589 Phage integrase family EL388_RS13285 PF03099 Biotin/lipoate A/B protein ligase family EL388_RS13300 PF04304 Protein of unknown function (DUF454) EL388_RS13310 PF04359 Protein of unknown function (DUF493) EL388_RS13315 PF01063 Amino-transferase class IV EL388_RS13320 PF07943 Penicillin-binding protein 5, C-terminal domain EL388_RS13320 PF00768 D-alanyl-D-alanine carboxypeptidase EL388_RS13325 PF05036 Sporulation related domain EL388_RS13325 PF03330 Lytic transglycolase EL388_RS13330 PF01098 Cell cycle protein EL388_RS13335 PF00905 Penicillin binding protein transpeptidase domain EL388_RS13335 PF03717 Penicillin-binding Protein dimerisation domain EL388_RS13355 PF02686 Glu-tRNAGln amidotransferase C subunit EL388_RS13360 PF01425 Amidase EL388_RS13370 PF02637 GatB domain EL388_RS13370 PF02934 GatB/GatE catalytic domain EL388_RS13380 PF00360 Phytochrome region EL388_RS13380 PF08446 PAS fold EL388_RS13380 PF00512 His Kinase A (phospho-acceptor) domain EL388_RS13380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EL388_RS13380 PF01590 GAF domain EL388_RS13390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EL388_RS13390 PF00512 His Kinase A (phospho-acceptor) domain EL388_RS13390 PF00989 PAS fold EL388_RS13395 PF00072 Response regulator receiver domain EL388_RS13400 PF00563 EAL domain EL388_RS13400 PF00990 Diguanylate cyclase, GGDEF domain EL388_RS13400 PF08448 PAS fold EL388_RS13405 PF00156 Phosphoribosyl transferase domain EL388_RS13410 PF03372 Endonuclease/Exonuclease/phosphatase family EL388_RS13415 PF07690 Major Facilitator Superfamily EL388_RS13420 PF00989 PAS fold EL388_RS13420 PF00563 EAL domain EL388_RS13420 PF00990 Diguanylate cyclase, GGDEF domain EL388_RS13420 PF01590 GAF domain EL388_RS13500 PF07030 Protein of unknown function (DUF1320) EL388_RS13510 PF10124 Mu-like prophage major head subunit gpT EL388_RS13525 PF04233 Phage Mu protein F like protein EL388_RS13535 PF06074 Protein of unknown function (DUF935) EL388_RS13540 PF03237 Terminase-like family EL388_RS13640 PF00563 EAL domain EL388_RS13640 PF00990 Diguanylate cyclase, GGDEF domain EL388_RS13640 PF03707 Bacterial signalling protein N terminal repeat EL388_RS13645 PF13614 AAA domain EL388_RS13650 PF01380 SIS domain EL388_RS13655 PF14602 Hexapeptide repeat of succinyl-transferase EL388_RS13655 PF12804 MobA-like NTP transferase domain EL388_RS13655 PF00132 Bacterial transferase hexapeptide (six repeats) EL388_RS13660 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain EL388_RS13660 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain EL388_RS13665 PF02874 ATP synthase alpha/beta family, beta-barrel domain EL388_RS13665 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EL388_RS13670 PF00231 ATP synthase EL388_RS13675 PF02874 ATP synthase alpha/beta family, beta-barrel domain EL388_RS13675 PF00306 ATP synthase alpha/beta chain, C terminal domain EL388_RS13675 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EL388_RS13680 PF00213 ATP synthase delta (OSCP) subunit EL388_RS13685 PF00430 ATP synthase B/B' CF(0) EL388_RS13690 PF00137 ATP synthase subunit C EL388_RS13695 PF00119 ATP synthase A chain EL388_RS13705 PF17762 HTH domain found in ParB protein EL388_RS13705 PF02195 ParB-like nuclease domain EL388_RS13710 PF13614 AAA domain EL388_RS13715 PF02527 rRNA small subunit methyltransferase G EL388_RS13720 PF13932 GidA associated domain EL388_RS13720 PF01134 Glucose inhibited division protein A EL388_RS13725 PF00563 EAL domain EL388_RS13725 PF08448 PAS fold EL388_RS13725 PF00990 Diguanylate cyclase, GGDEF domain EL388_RS13730 PF00005 ABC transporter EL388_RS13730 PF00664 ABC transporter transmembrane region EL388_RS13740 PF12631 MnmE helical domain EL388_RS13740 PF01926 50S ribosome-binding GTPase EL388_RS13740 PF10396 GTP-binding protein TrmE N-terminus EL388_RS13745 PF02096 60Kd inner membrane protein EL388_RS13745 PF14849 YidC periplasmic domain EL388_RS13750 PF00825 Ribonuclease P EL388_RS13755 PF00468 Ribosomal protein L34