locus-tag class description UCH003_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix UCH003_RS00005 PF11638 DnaA N-terminal domain UCH003_RS00005 PF00308 Bacterial dnaA protein UCH003_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain UCH003_RS00010 PF02767 DNA polymerase III beta subunit, central domain UCH003_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain UCH003_RS00015 PF00204 DNA gyrase B UCH003_RS00015 PF00986 DNA gyrase B subunit, carboxyl terminus UCH003_RS00015 PF01751 Toprim domain UCH003_RS00015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UCH003_RS00025 PF14489 QueF-like protein UCH003_RS00040 PF03167 Uracil DNA glycosylase superfamily UCH003_RS00045 PF14815 NUDIX domain UCH003_RS00045 PF00730 HhH-GPD superfamily base excision DNA repair protein UCH003_RS00050 PF07690 Major Facilitator Superfamily UCH003_RS00085 PF00920 Dehydratase family UCH003_RS00090 PF01914 MarC family integral membrane protein UCH003_RS00105 PF02472 Biopolymer transport protein ExbD/TolR UCH003_RS00110 PF01618 MotA/TolQ/ExbB proton channel family UCH003_RS00125 PF00005 ABC transporter UCH003_RS00130 PF01032 FecCD transport family UCH003_RS00140 PF08241 Methyltransferase domain UCH003_RS00145 PF08447 PAS fold UCH003_RS00145 PF13426 PAS domain UCH003_RS00145 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UCH003_RS00150 PF00483 Nucleotidyl transferase UCH003_RS00155 PF00117 Glutamine amidotransferase class-I UCH003_RS00155 PF06418 CTP synthase N-terminus UCH003_RS00160 PF17768 RecJ OB domain UCH003_RS00160 PF01368 DHH family UCH003_RS00160 PF02272 DHHA1 domain UCH003_RS00170 PF00795 Carbon-nitrogen hydrolase UCH003_RS00175 PF00268 Ribonucleotide reductase, small chain UCH003_RS00185 PF00384 Molybdopterin oxidoreductase UCH003_RS00185 PF10518 TAT (twin-arginine translocation) pathway signal sequence UCH003_RS00185 PF04879 Molybdopterin oxidoreductase Fe4S4 domain UCH003_RS00185 PF01568 Molydopterin dinucleotide binding domain UCH003_RS00190 PF13247 4Fe-4S dicluster domain UCH003_RS00190 PF00037 4Fe-4S binding domain UCH003_RS00210 PF03466 LysR substrate binding domain UCH003_RS00210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UCH003_RS00220 PF01568 Molydopterin dinucleotide binding domain UCH003_RS00220 PF00384 Molybdopterin oxidoreductase UCH003_RS00220 PF04879 Molybdopterin oxidoreductase Fe4S4 domain UCH003_RS00225 PF13247 4Fe-4S dicluster domain UCH003_RS00240 PF01027 Inhibitor of apoptosis-promoting Bax1 UCH003_RS00305 PF01967 MoaC family UCH003_RS00310 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) UCH003_RS00315 PF02253 Phospholipase A1 UCH003_RS00325 PF05573 NosL UCH003_RS00335 PF12804 MobA-like NTP transferase domain UCH003_RS00340 PF00330 Aconitase family (aconitate hydratase) UCH003_RS00350 PF00578 AhpC/TSA family UCH003_RS00350 PF10417 C-terminal domain of 1-Cys peroxiredoxin UCH003_RS00365 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain UCH003_RS00365 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain UCH003_RS00370 PF02595 Glycerate kinase family UCH003_RS00390 PF13288 DXP reductoisomerase C-terminal domain UCH003_RS00390 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase UCH003_RS00390 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain UCH003_RS00395 PF00860 Permease family UCH003_RS00400 PF01235 Sodium:alanine symporter family UCH003_RS00405 PF00149 Calcineurin-like phosphoesterase UCH003_RS00430 PF00990 Diguanylate cyclase, GGDEF domain UCH003_RS00430 PF00563 EAL domain UCH003_RS00430 PF03707 Bacterial signalling protein N terminal repeat UCH003_RS00440 PF00814 Glycoprotease family UCH003_RS00450 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain UCH003_RS00455 PF01313 Bacterial export proteins, family 3 UCH003_RS00460 PF02621 Menaquinone biosynthesis UCH003_RS00465 PF00154 recA bacterial DNA recombination protein UCH003_RS00470 PF03952 Enolase, N-terminal domain UCH003_RS00470 PF00113 Enolase, C-terminal TIM barrel domain UCH003_RS00485 PF00285 Citrate synthase, C-terminal domain UCH003_RS00490 PF06968 Biotin and Thiamin Synthesis associated domain UCH003_RS00490 PF04055 Radical SAM superfamily UCH003_RS00495 PF01751 Toprim domain UCH003_RS00495 PF01131 DNA topoisomerase UCH003_RS00495 PF01396 Topoisomerase DNA binding C4 zinc finger UCH003_RS00500 PF00700 Bacterial flagellin C-terminal helical region UCH003_RS00500 PF00669 Bacterial flagellin N-terminal helical region UCH003_RS00500 PF00700 Bacterial flagellin C-terminal helical region UCH003_RS00500 PF00669 Bacterial flagellin N-terminal helical region UCH003_RS00500 PF07196 Flagellin hook IN motif UCH003_RS00500 PF07196 Flagellin hook IN motif UCH003_RS00525 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family UCH003_RS00540 PF03102 NeuB family UCH003_RS00540 PF08666 SAF domain UCH003_RS00545 PF13302 Acetyltransferase (GNAT) domain UCH003_RS00555 PF02348 Cytidylyltransferase UCH003_RS00560 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family UCH003_RS00565 PF02719 Polysaccharide biosynthesis protein UCH003_RS00570 PF00700 Bacterial flagellin C-terminal helical region UCH003_RS00570 PF07196 Flagellin hook IN motif UCH003_RS00570 PF00669 Bacterial flagellin N-terminal helical region UCH003_RS00580 PF12146 Serine aminopeptidase, S33 UCH003_RS00585 PF10672 S-adenosylmethionine-dependent methyltransferase UCH003_RS00585 PF17785 PUA-like domain UCH003_RS00595 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ UCH003_RS00615 PF00692 dUTPase UCH003_RS00620 PF00364 Biotin-requiring enzyme UCH003_RS00625 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain UCH003_RS00625 PF00289 Biotin carboxylase, N-terminal domain UCH003_RS00625 PF02785 Biotin carboxylase C-terminal domain UCH003_RS00635 PF00749 tRNA synthetases class I (E and Q), catalytic domain UCH003_RS00640 PF03949 Malic enzyme, NAD binding domain UCH003_RS00640 PF00390 Malic enzyme, N-terminal domain UCH003_RS00640 PF01515 Phosphate acetyl/butaryl transferase UCH003_RS00650 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain UCH003_RS00650 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase UCH003_RS00655 PF02621 Menaquinone biosynthesis UCH003_RS00660 PF03741 Integral membrane protein TerC family UCH003_RS00670 PF01451 Low molecular weight phosphotyrosine protein phosphatase UCH003_RS00680 PF17773 UPF0176 acylphosphatase like domain UCH003_RS00680 PF12368 Rhodanase C-terminal UCH003_RS00680 PF00581 Rhodanese-like domain UCH003_RS00685 PF00990 Diguanylate cyclase, GGDEF domain UCH003_RS00685 PF08448 PAS fold UCH003_RS00705 PF01053 Cys/Met metabolism PLP-dependent enzyme UCH003_RS00710 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases UCH003_RS00710 PF14824 Sirohaem biosynthesis protein central UCH003_RS00710 PF10414 Sirohaem synthase dimerisation region UCH003_RS00715 PF01077 Nitrite and sulphite reductase 4Fe-4S domain UCH003_RS00715 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain UCH003_RS00725 PF00899 ThiF family UCH003_RS00735 PF00009 Elongation factor Tu GTP binding domain UCH003_RS00740 PF01507 Phosphoadenosine phosphosulfate reductase family UCH003_RS00745 PF01507 Phosphoadenosine phosphosulfate reductase family UCH003_RS00755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UCH003_RS00760 PF00072 Response regulator receiver domain UCH003_RS00760 PF00486 Transcriptional regulatory protein, C terminal UCH003_RS00780 PF00873 AcrB/AcrD/AcrF family UCH003_RS00805 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain UCH003_RS00805 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain UCH003_RS00805 PF00205 Thiamine pyrophosphate enzyme, central domain UCH003_RS00810 PF18665 Tetracyclin repressor-like, C-terminal domain UCH003_RS00810 PF00440 Bacterial regulatory proteins, tetR family UCH003_RS00830 PF00005 ABC transporter UCH003_RS00835 PF02687 FtsX-like permease family UCH003_RS00875 PF01638 HxlR-like helix-turn-helix UCH003_RS00880 PF02525 Flavodoxin-like fold UCH003_RS00885 PF00881 Nitroreductase family UCH003_RS00900 PF09371 Tex-like protein N-terminal domain UCH003_RS00900 PF16921 Tex protein YqgF-like domain UCH003_RS00900 PF00575 S1 RNA binding domain UCH003_RS00900 PF17674 HHH domain UCH003_RS00905 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain UCH003_RS00905 PF01842 ACT domain UCH003_RS00905 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain UCH003_RS00920 PF00171 Aldehyde dehydrogenase family UCH003_RS00925 PF11799 impB/mucB/samB family C-terminal domain UCH003_RS00925 PF00817 impB/mucB/samB family UCH003_RS00940 PF13333 Integrase core domain UCH003_RS00940 PF13276 HTH-like domain UCH003_RS00940 PF00665 Integrase core domain UCH003_RS00995 PF01580 FtsK/SpoIIIE family UCH003_RS00995 PF09397 Ftsk gamma domain UCH003_RS00995 PF17854 FtsK alpha domain UCH003_RS00995 PF13491 4TM region of DNA translocase FtsK/SpoIIIE UCH003_RS01035 PF05690 Thiazole biosynthesis protein ThiG UCH003_RS01040 PF00551 Formyl transferase UCH003_RS01045 PF03853 YjeF-related protein N-terminus UCH003_RS01045 PF01256 Carbohydrate kinase UCH003_RS01050 PF01078 Magnesium chelatase, subunit ChlI UCH003_RS01050 PF13335 Magnesium chelatase, subunit ChlI C-terminal UCH003_RS01055 PF01327 Polypeptide deformylase UCH003_RS01065 PF00574 Clp protease UCH003_RS01070 PF05698 Bacterial trigger factor protein (TF) C-terminus UCH003_RS01070 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase UCH003_RS01070 PF05697 Bacterial trigger factor protein (TF) UCH003_RS01075 PF01227 GTP cyclohydrolase I UCH003_RS01080 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain UCH003_RS01080 PF18269 T3SS EscN ATPase C-terminal domain UCH003_RS01085 PF00266 Aminotransferase class-V UCH003_RS01090 PF01106 NifU-like domain UCH003_RS01090 PF01592 NifU-like N terminal domain UCH003_RS01090 PF04324 BFD-like [2Fe-2S] binding domain UCH003_RS01100 PF02391 MoaE protein UCH003_RS01105 PF00994 Probable molybdopterin binding domain UCH003_RS01105 PF03454 MoeA C-terminal region (domain IV) UCH003_RS01105 PF03453 MoeA N-terminal region (domain I and II) UCH003_RS01115 PF01497 Periplasmic binding protein UCH003_RS01120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UCH003_RS01120 PF17202 Single cache domain 3 UCH003_RS01120 PF00672 HAMP domain UCH003_RS01140 PF02254 TrkA-N domain UCH003_RS01140 PF00999 Sodium/hydrogen exchanger family UCH003_RS01155 PF09335 SNARE associated Golgi protein UCH003_RS01160 PF07690 Major Facilitator Superfamily UCH003_RS01170 PF01725 Ham1 family UCH003_RS01175 PF16653 Saccharopine dehydrogenase C-terminal domain UCH003_RS01175 PF03435 Saccharopine dehydrogenase NADP binding domain UCH003_RS01185 PF00106 short chain dehydrogenase UCH003_RS01190 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UCH003_RS01190 PF17202 Single cache domain 3 UCH003_RS01190 PF00672 HAMP domain UCH003_RS01195 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain UCH003_RS01200 PF00528 Binding-protein-dependent transport system inner membrane component UCH003_RS01205 PF00005 ABC transporter UCH003_RS01220 PF00266 Aminotransferase class-V UCH003_RS01225 PF13419 Haloacid dehalogenase-like hydrolase UCH003_RS01225 PF00266 Aminotransferase class-V UCH003_RS01230 PF12008 Type I restriction and modification enzyme - subunit R C terminal UCH003_RS01230 PF18766 SWI2/SNF2 ATPase UCH003_RS01230 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) UCH003_RS01250 PF12161 HsdM N-terminal domain UCH003_RS01250 PF02384 N-6 DNA Methylase UCH003_RS01260 PF00486 Transcriptional regulatory protein, C terminal UCH003_RS01260 PF00072 Response regulator receiver domain UCH003_RS01270 PF00072 Response regulator receiver domain UCH003_RS01280 PF01841 Transglutaminase-like superfamily UCH003_RS01305 PF00270 DEAD/DEAH box helicase UCH003_RS01305 PF00271 Helicase conserved C-terminal domain UCH003_RS01310 PF01568 Molydopterin dinucleotide binding domain UCH003_RS01310 PF00384 Molybdopterin oxidoreductase UCH003_RS01310 PF04879 Molybdopterin oxidoreductase Fe4S4 domain UCH003_RS01315 PF05728 Uncharacterised protein family (UPF0227) UCH003_RS01325 PF12833 Helix-turn-helix domain UCH003_RS01345 PF01875 Memo-like protein UCH003_RS01350 PF12833 Helix-turn-helix domain UCH003_RS01350 PF06445 GyrI-like small molecule binding domain UCH003_RS01360 PF00440 Bacterial regulatory proteins, tetR family UCH003_RS01360 PF16925 Tetracyclin repressor-like, C-terminal domain UCH003_RS01370 PF02080 TrkA-C domain UCH003_RS01370 PF06826 Predicted Permease Membrane Region UCH003_RS01380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UCH003_RS01435 PF02086 D12 class N6 adenine-specific DNA methyltransferase UCH003_RS01445 PF00486 Transcriptional regulatory protein, C terminal UCH003_RS01445 PF00072 Response regulator receiver domain UCH003_RS01475 PF04264 YceI-like domain UCH003_RS01490 PF00990 Diguanylate cyclase, GGDEF domain UCH003_RS01490 PF13188 PAS domain UCH003_RS01490 PF00563 EAL domain UCH003_RS01490 PF03707 Bacterial signalling protein N terminal repeat UCH003_RS01495 PF03144 Elongation factor Tu domain 2 UCH003_RS01495 PF09107 Elongation factor SelB, winged helix UCH003_RS01495 PF09106 Elongation factor SelB, winged helix UCH003_RS01495 PF00009 Elongation factor Tu GTP binding domain UCH003_RS01500 PF03841 L-seryl-tRNA selenium transferase UCH003_RS01510 PF00512 His Kinase A (phospho-acceptor) domain UCH003_RS01510 PF00989 PAS fold UCH003_RS01510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UCH003_RS01535 PF01568 Molydopterin dinucleotide binding domain UCH003_RS01535 PF04879 Molybdopterin oxidoreductase Fe4S4 domain UCH003_RS01535 PF00384 Molybdopterin oxidoreductase UCH003_RS01540 PF12838 4Fe-4S dicluster domain UCH003_RS01540 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region UCH003_RS01540 PF01568 Molydopterin dinucleotide binding domain UCH003_RS01540 PF00384 Molybdopterin oxidoreductase UCH003_RS01540 PF04879 Molybdopterin oxidoreductase Fe4S4 domain UCH003_RS01545 PF13247 4Fe-4S dicluster domain UCH003_RS01560 PF02537 CrcB-like protein, Camphor Resistance (CrcB) UCH003_RS01575 PF03459 TOBE domain UCH003_RS01580 PF05175 Methyltransferase small domain UCH003_RS01580 PF17827 PrmC N-terminal domain UCH003_RS01590 PF13649 Methyltransferase domain UCH003_RS01595 PF01497 Periplasmic binding protein UCH003_RS01605 PF03459 TOBE domain UCH003_RS01605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UCH003_RS01610 PF01618 MotA/TolQ/ExbB proton channel family UCH003_RS01615 PF02472 Biopolymer transport protein ExbD/TolR UCH003_RS01625 PF01497 Periplasmic binding protein UCH003_RS01630 PF01497 Periplasmic binding protein UCH003_RS01640 PF08241 Methyltransferase domain UCH003_RS01650 PF00296 Luciferase-like monooxygenase UCH003_RS01655 PF01032 FecCD transport family UCH003_RS01660 PF00005 ABC transporter UCH003_RS01665 PF07715 TonB-dependent Receptor Plug Domain UCH003_RS01665 PF07660 Secretin and TonB N terminus short domain UCH003_RS01665 PF00593 TonB dependent receptor UCH003_RS01670 PF13536 Putative multidrug resistance efflux transporter UCH003_RS01675 PF07690 Major Facilitator Superfamily UCH003_RS01685 PF05231 MASE1 UCH003_RS01685 PF00990 Diguanylate cyclase, GGDEF domain UCH003_RS01685 PF08448 PAS fold UCH003_RS01685 PF00563 EAL domain UCH003_RS01685 PF13426 PAS domain UCH003_RS01685 PF08447 PAS fold UCH003_RS01690 PF00497 Bacterial extracellular solute-binding proteins, family 3 UCH003_RS01700 PF01206 Sulfurtransferase TusA UCH003_RS01705 PF00586 AIR synthase related protein, N-terminal domain UCH003_RS01705 PF02769 AIR synthase related protein, C-terminal domain UCH003_RS01720 PF00528 Binding-protein-dependent transport system inner membrane component UCH003_RS01725 PF00005 ABC transporter UCH003_RS01725 PF08402 TOBE domain UCH003_RS01735 PF09347 Domain of unknown function (DUF1989) UCH003_RS01740 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain UCH003_RS01740 PF02785 Biotin carboxylase C-terminal domain UCH003_RS01740 PF00289 Biotin carboxylase, N-terminal domain UCH003_RS01750 PF01425 Amidase UCH003_RS01755 PF01425 Amidase UCH003_RS01780 PF00145 C-5 cytosine-specific DNA methylase UCH003_RS01790 PF00072 Response regulator receiver domain UCH003_RS01790 PF00486 Transcriptional regulatory protein, C terminal UCH003_RS01795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UCH003_RS01795 PF00512 His Kinase A (phospho-acceptor) domain UCH003_RS01795 PF00989 PAS fold UCH003_RS01800 PF17763 Glutaminase/Asparaginase C-terminal domain UCH003_RS01800 PF00710 Asparaginase, N-terminal UCH003_RS01805 PF03605 Anaerobic c4-dicarboxylate membrane transporter UCH003_RS01810 PF00206 Lyase UCH003_RS01810 PF10415 Fumarase C C-terminus UCH003_RS01815 PF00206 Lyase UCH003_RS01815 PF10415 Fumarase C C-terminus UCH003_RS01820 PF07715 TonB-dependent Receptor Plug Domain UCH003_RS01820 PF00593 TonB dependent receptor UCH003_RS01825 PF05958 tRNA (Uracil-5-)-methyltransferase UCH003_RS01825 PF01938 TRAM domain UCH003_RS01830 PF01497 Periplasmic binding protein UCH003_RS01835 PF00106 short chain dehydrogenase UCH003_RS01855 PF03824 High-affinity nickel-transport protein UCH003_RS01860 PF00072 Response regulator receiver domain UCH003_RS01860 PF00486 Transcriptional regulatory protein, C terminal UCH003_RS01885 PF01869 BadF/BadG/BcrA/BcrD ATPase family UCH003_RS01890 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component UCH003_RS01895 PF02673 Bacitracin resistance protein BacA UCH003_RS01900 PF02001 Protein of unknown function DUF134 UCH003_RS01910 PF02743 Cache domain UCH003_RS01910 PF00672 HAMP domain UCH003_RS01910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UCH003_RS01915 PF00158 Sigma-54 interaction domain UCH003_RS01915 PF02954 Bacterial regulatory protein, Fis family UCH003_RS01915 PF00072 Response regulator receiver domain UCH003_RS01920 PF02743 Cache domain UCH003_RS01920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UCH003_RS01920 PF00512 His Kinase A (phospho-acceptor) domain UCH003_RS01925 PF05231 MASE1 UCH003_RS01925 PF00563 EAL domain UCH003_RS01930 PF03167 Uracil DNA glycosylase superfamily UCH003_RS01935 PF08019 Phosphoethanolamine transferase EptA/EptB UCH003_RS01935 PF00884 Sulfatase UCH003_RS01940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UCH003_RS01940 PF00512 His Kinase A (phospho-acceptor) domain UCH003_RS01940 PF18719 ArlS sensor domain UCH003_RS01945 PF00072 Response regulator receiver domain UCH003_RS01945 PF00486 Transcriptional regulatory protein, C terminal UCH003_RS01950 PF00892 EamA-like transporter family UCH003_RS01955 PF08448 PAS fold UCH003_RS01955 PF00990 Diguanylate cyclase, GGDEF domain UCH003_RS01960 PF03960 ArsC family UCH003_RS01965 PF01810 LysE type translocator UCH003_RS01980 PF00005 ABC transporter UCH003_RS01980 PF12704 MacB-like periplasmic core domain UCH003_RS01980 PF02687 FtsX-like permease family UCH003_RS01995 PF08338 Domain of unknown function (DUF1731) UCH003_RS01995 PF01370 NAD dependent epimerase/dehydratase family UCH003_RS02000 PF01810 LysE type translocator UCH003_RS02010 PF00258 Flavodoxin UCH003_RS02025 PF03824 High-affinity nickel-transport protein UCH003_RS02035 PF02694 Uncharacterised BCR, YnfA/UPF0060 family UCH003_RS02050 PF00684 DnaJ central domain UCH003_RS02050 PF01556 DnaJ C terminal domain UCH003_RS02050 PF00226 DnaJ domain UCH003_RS02055 PF00072 Response regulator receiver domain UCH003_RS02060 PF01584 CheW-like domain UCH003_RS02065 PF02203 Tar ligand binding domain homologue UCH003_RS02065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UCH003_RS02065 PF00672 HAMP domain UCH003_RS02075 PF01627 Hpt domain UCH003_RS02075 PF01584 CheW-like domain UCH003_RS02075 PF09078 CheY binding UCH003_RS02075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UCH003_RS02075 PF02895 Signal transducing histidine kinase, homodimeric domain UCH003_RS02080 PF03705 CheR methyltransferase, all-alpha domain UCH003_RS02080 PF01739 CheR methyltransferase, SAM binding domain UCH003_RS02085 PF00512 His Kinase A (phospho-acceptor) domain UCH003_RS02085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UCH003_RS02090 PF03975 CheD chemotactic sensory transduction UCH003_RS02095 PF00072 Response regulator receiver domain UCH003_RS02095 PF01339 CheB methylesterase UCH003_RS02100 PF00512 His Kinase A (phospho-acceptor) domain UCH003_RS02100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UCH003_RS02105 PF00486 Transcriptional regulatory protein, C terminal UCH003_RS02105 PF00072 Response regulator receiver domain UCH003_RS02110 PF00563 EAL domain UCH003_RS02110 PF00990 Diguanylate cyclase, GGDEF domain UCH003_RS02110 PF03707 Bacterial signalling protein N terminal repeat UCH003_RS02120 PF00072 Response regulator receiver domain UCH003_RS02130 PF01807 CHC2 zinc finger UCH003_RS02130 PF08275 DNA primase catalytic core, N-terminal domain UCH003_RS02130 PF16730 DnaG-primase C-terminal, helicase-binding domain UCH003_RS02130 PF13662 Toprim domain UCH003_RS02140 PF00075 RNase H UCH003_RS02145 PF00035 Double-stranded RNA binding motif UCH003_RS02145 PF14622 Ribonuclease-III-like UCH003_RS02150 PF01264 Chorismate synthase UCH003_RS02155 PF08448 PAS fold UCH003_RS02155 PF08447 PAS fold UCH003_RS02155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UCH003_RS02160 PF07670 Nucleoside recognition UCH003_RS02160 PF02421 Ferrous iron transport protein B UCH003_RS02160 PF07664 Ferrous iron transport protein B C terminus UCH003_RS02170 PF01351 Ribonuclease HII UCH003_RS02185 PF00338 Ribosomal protein S10p/S20e UCH003_RS02190 PF00297 Ribosomal protein L3 UCH003_RS02195 PF00573 Ribosomal protein L4/L1 family UCH003_RS02200 PF00276 Ribosomal protein L23 UCH003_RS02205 PF03947 Ribosomal Proteins L2, C-terminal domain UCH003_RS02205 PF00181 Ribosomal Proteins L2, RNA binding domain UCH003_RS02210 PF00203 Ribosomal protein S19 UCH003_RS02215 PF00237 Ribosomal protein L22p/L17e UCH003_RS02220 PF00189 Ribosomal protein S3, C-terminal domain UCH003_RS02220 PF07650 KH domain UCH003_RS02225 PF00252 Ribosomal protein L16p/L10e UCH003_RS02230 PF00831 Ribosomal L29 protein UCH003_RS02235 PF00366 Ribosomal protein S17 UCH003_RS02240 PF00238 Ribosomal protein L14p/L23e UCH003_RS02245 PF00467 KOW motif UCH003_RS02245 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 UCH003_RS02250 PF00281 Ribosomal protein L5 UCH003_RS02250 PF00673 ribosomal L5P family C-terminus UCH003_RS02255 PF00253 Ribosomal protein S14p/S29e UCH003_RS02260 PF00410 Ribosomal protein S8 UCH003_RS02265 PF00347 Ribosomal protein L6 UCH003_RS02270 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast UCH003_RS02275 PF03719 Ribosomal protein S5, C-terminal domain UCH003_RS02275 PF00333 Ribosomal protein S5, N-terminal domain UCH003_RS02280 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A UCH003_RS02285 PF00344 SecY translocase UCH003_RS02290 PF00557 Metallopeptidase family M24 UCH003_RS02295 PF01176 Translation initiation factor 1A / IF-1 UCH003_RS02300 PF00444 Ribosomal protein L36 UCH003_RS02305 PF00416 Ribosomal protein S13/S18 UCH003_RS02310 PF00411 Ribosomal protein S11 UCH003_RS02315 PF00163 Ribosomal protein S4/S9 N-terminal domain UCH003_RS02315 PF01479 S4 domain UCH003_RS02320 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain UCH003_RS02320 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain UCH003_RS02320 PF01000 RNA polymerase Rpb3/RpoA insert domain UCH003_RS02325 PF01196 Ribosomal protein L17 UCH003_RS02340 PF08245 Mur ligase middle domain UCH003_RS02340 PF02875 Mur ligase family, glutamate ligase domain UCH003_RS02345 PF02261 Aspartate decarboxylase UCH003_RS02350 PF02575 YbaB/EbfC DNA-binding family UCH003_RS02360 PF00348 Polyprenyl synthetase UCH003_RS02365 PF00456 Transketolase, thiamine diphosphate binding domain UCH003_RS02365 PF02780 Transketolase, C-terminal domain UCH003_RS02365 PF02779 Transketolase, pyrimidine binding domain UCH003_RS02370 PF13419 Haloacid dehalogenase-like hydrolase UCH003_RS02375 PF02743 Cache domain UCH003_RS02375 PF00672 HAMP domain UCH003_RS02375 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UCH003_RS02380 PF00266 Aminotransferase class-V UCH003_RS02385 PF13393 Histidyl-tRNA synthetase UCH003_RS02390 PF00709 Adenylosuccinate synthetase UCH003_RS02410 PF00117 Glutamine amidotransferase class-I UCH003_RS02410 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain UCH003_RS02420 PF08447 PAS fold UCH003_RS02420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UCH003_RS02420 PF08448 PAS fold UCH003_RS02425 PF00072 Response regulator receiver domain UCH003_RS02425 PF00486 Transcriptional regulatory protein, C terminal UCH003_RS02430 PF00115 Cytochrome C and Quinol oxidase polypeptide I UCH003_RS02445 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP UCH003_RS02445 PF13442 Cytochrome C oxidase, cbb3-type, subunit III UCH003_RS02470 PF13361 UvrD-like helicase C-terminal domain UCH003_RS02470 PF12705 PD-(D/E)XK nuclease superfamily UCH003_RS02470 PF00580 UvrD/REP helicase N-terminal domain UCH003_RS02475 PF00572 Ribosomal protein L13 UCH003_RS02480 PF00380 Ribosomal protein S9/S16 UCH003_RS02490 PF02222 ATP-grasp domain UCH003_RS02495 PF00654 Voltage gated chloride channel UCH003_RS02505 PF00465 Iron-containing alcohol dehydrogenase UCH003_RS02510 PF06719 AraC-type transcriptional regulator N-terminus UCH003_RS02510 PF12833 Helix-turn-helix domain UCH003_RS02530 PF03352 Methyladenine glycosylase UCH003_RS02530 PF00117 Glutamine amidotransferase class-I UCH003_RS02530 PF13302 Acetyltransferase (GNAT) domain UCH003_RS02530 PF13673 Acetyltransferase (GNAT) domain UCH003_RS02530 PF00958 GMP synthase C terminal domain UCH003_RS02535 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle UCH003_RS02540 PF05736 OprF membrane domain UCH003_RS02540 PF00691 OmpA family UCH003_RS02545 PF05552 Conserved TM helix UCH003_RS02545 PF00924 Mechanosensitive ion channel UCH003_RS02555 PF13419 Haloacid dehalogenase-like hydrolase UCH003_RS02560 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II UCH003_RS02560 PF10371 Domain of unknown function UCH003_RS02560 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase UCH003_RS02560 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg UCH003_RS02560 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain UCH003_RS02590 PF02664 S-Ribosylhomocysteinase (LuxS) UCH003_RS02595 PF00375 Sodium:dicarboxylate symporter family UCH003_RS02600 PF01243 Pyridoxamine 5'-phosphate oxidase UCH003_RS02615 PF07690 Major Facilitator Superfamily UCH003_RS02620 PF07690 Major Facilitator Superfamily UCH003_RS02630 PF02562 PhoH-like protein UCH003_RS02660 PF06508 Queuosine biosynthesis protein QueC UCH003_RS02695 PF03061 Thioesterase superfamily UCH003_RS02700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UCH003_RS02700 PF00512 His Kinase A (phospho-acceptor) domain UCH003_RS02705 PF00486 Transcriptional regulatory protein, C terminal UCH003_RS02705 PF00072 Response regulator receiver domain UCH003_RS02710 PF01895 PhoU domain UCH003_RS02720 PF09382 RQC domain UCH003_RS02720 PF00570 HRDC domain UCH003_RS02720 PF00271 Helicase conserved C-terminal domain UCH003_RS02720 PF00270 DEAD/DEAH box helicase UCH003_RS02720 PF16124 RecQ zinc-binding UCH003_RS02730 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase UCH003_RS02735 PF00005 ABC transporter UCH003_RS02740 PF00528 Binding-protein-dependent transport system inner membrane component UCH003_RS02745 PF00528 Binding-protein-dependent transport system inner membrane component UCH003_RS02750 PF12849 PBP superfamily domain UCH003_RS02765 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 UCH003_RS02775 PF01053 Cys/Met metabolism PLP-dependent enzyme UCH003_RS02785 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain UCH003_RS02785 PF00289 Biotin carboxylase, N-terminal domain UCH003_RS02785 PF02785 Biotin carboxylase C-terminal domain UCH003_RS02790 PF03649 Uncharacterised protein family (UPF0014) UCH003_RS02805 PF12792 CSS motif domain associated with EAL UCH003_RS02805 PF00563 EAL domain UCH003_RS02810 PF16363 GDP-mannose 4,6 dehydratase UCH003_RS02815 PF00483 Nucleotidyl transferase UCH003_RS02820 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase UCH003_RS02825 PF04321 RmlD substrate binding domain UCH003_RS02830 PF16363 GDP-mannose 4,6 dehydratase UCH003_RS02835 PF01061 ABC-2 type transporter UCH003_RS02840 PF00005 ABC transporter UCH003_RS02850 PF14307 Glycosyltransferase WbsX UCH003_RS02850 PF05045 Rhamnan synthesis protein F UCH003_RS02855 PF03407 Nucleotide-diphospho-sugar transferase UCH003_RS02865 PF00483 Nucleotidyl transferase UCH003_RS02870 PF16363 GDP-mannose 4,6 dehydratase UCH003_RS02875 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain UCH003_RS02875 PF00205 Thiamine pyrophosphate enzyme, central domain UCH003_RS02875 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain UCH003_RS02880 PF01118 Semialdehyde dehydrogenase, NAD binding domain UCH003_RS02880 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation UCH003_RS02885 PF07836 DmpG-like communication domain UCH003_RS02885 PF00682 HMGL-like UCH003_RS02890 PF16363 GDP-mannose 4,6 dehydratase UCH003_RS02895 PF01370 NAD dependent epimerase/dehydratase family UCH003_RS02900 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family UCH003_RS02910 PF00535 Glycosyl transferase family 2 UCH003_RS02915 PF00535 Glycosyl transferase family 2 UCH003_RS02925 PF02397 Bacterial sugar transferase UCH003_RS02935 PF08245 Mur ligase middle domain UCH003_RS02940 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 UCH003_RS02940 PF00953 Glycosyl transferase family 4 UCH003_RS02945 PF01676 Metalloenzyme superfamily UCH003_RS02945 PF06415 BPG-independent PGAM N-terminus (iPGM_N) UCH003_RS02955 PF00550 Phosphopantetheine attachment site UCH003_RS02960 PF02801 Beta-ketoacyl synthase, C-terminal domain UCH003_RS02960 PF00109 Beta-ketoacyl synthase, N-terminal domain UCH003_RS02965 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit UCH003_RS02975 PF00032 Cytochrome b(C-terminal)/b6/petD UCH003_RS02975 PF00033 Cytochrome b/b6/petB UCH003_RS02980 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal UCH003_RS02980 PF00355 Rieske [2Fe-2S] domain UCH003_RS02985 PF01134 Glucose inhibited division protein A UCH003_RS02985 PF13932 GidA associated domain UCH003_RS02990 PF03746 LamB/YcsF family UCH003_RS02995 PF02682 Carboxyltransferase domain, subdomain C and D UCH003_RS03000 PF02626 Carboxyltransferase domain, subdomain A and B UCH003_RS03005 PF00672 HAMP domain UCH003_RS03005 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UCH003_RS03005 PF17202 Single cache domain 3 UCH003_RS03010 PF00677 Lumazine binding domain UCH003_RS03015 PF02578 Multi-copper polyphenol oxidoreductase laccase UCH003_RS03025 PF08534 Redoxin UCH003_RS03035 PF08448 PAS fold UCH003_RS03035 PF00563 EAL domain UCH003_RS03035 PF00990 Diguanylate cyclase, GGDEF domain UCH003_RS03040 PF00403 Heavy-metal-associated domain UCH003_RS03060 PF08645 Polynucleotide kinase 3 phosphatase UCH003_RS03065 PF01370 NAD dependent epimerase/dehydratase family UCH003_RS03070 PF01467 Cytidylyltransferase-like UCH003_RS03070 PF00294 pfkB family carbohydrate kinase UCH003_RS03075 PF13580 SIS domain UCH003_RS03110 PF00534 Glycosyl transferases group 1 UCH003_RS03110 PF00862 Sucrose synthase UCH003_RS03120 PF03279 Bacterial lipid A biosynthesis acyltransferase UCH003_RS03130 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I UCH003_RS03130 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II UCH003_RS03130 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III UCH003_RS03130 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain UCH003_RS03135 PF14743 DNA ligase OB-like domain UCH003_RS03135 PF01068 ATP dependent DNA ligase domain UCH003_RS03140 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain UCH003_RS03140 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain UCH003_RS03140 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain UCH003_RS03145 PF00483 Nucleotidyl transferase UCH003_RS03145 PF01050 Mannose-6-phosphate isomerase UCH003_RS03150 PF16363 GDP-mannose 4,6 dehydratase UCH003_RS03155 PF01370 NAD dependent epimerase/dehydratase family UCH003_RS03160 PF02894 Oxidoreductase family, C-terminal alpha/beta domain UCH003_RS03160 PF01408 Oxidoreductase family, NAD-binding Rossmann fold UCH003_RS03165 PF00132 Bacterial transferase hexapeptide (six repeats) UCH003_RS03170 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family UCH003_RS03185 PF02540 NAD synthase UCH003_RS03185 PF00958 GMP synthase C terminal domain UCH003_RS03185 PF00117 Glutamine amidotransferase class-I UCH003_RS03190 PF00117 Glutamine amidotransferase class-I UCH003_RS03195 PF00977 Histidine biosynthesis protein UCH003_RS03200 PF00117 Glutamine amidotransferase class-I UCH003_RS03200 PF02568 Thiamine biosynthesis protein (ThiI) UCH003_RS03200 PF00958 GMP synthase C terminal domain UCH003_RS03210 PF02350 UDP-N-acetylglucosamine 2-epimerase UCH003_RS03220 PF00953 Glycosyl transferase family 4 UCH003_RS03225 PF02516 Oligosaccharyl transferase STT3 subunit UCH003_RS03225 PF18527 STT3/PglB C-terminal beta-barrel domain UCH003_RS03235 PF00117 Glutamine amidotransferase class-I UCH003_RS03240 PF00977 Histidine biosynthesis protein UCH003_RS03245 PF00072 Response regulator receiver domain UCH003_RS03255 PF01434 Peptidase family M41 UCH003_RS03255 PF17862 AAA+ lid domain UCH003_RS03255 PF00004 ATPase family associated with various cellular activities (AAA) UCH003_RS03260 PF02666 Phosphatidylserine decarboxylase UCH003_RS03265 PF01066 CDP-alcohol phosphatidyltransferase UCH003_RS03270 PF08502 LeuA allosteric (dimerisation) domain UCH003_RS03270 PF00682 HMGL-like UCH003_RS03280 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) UCH003_RS03280 PF02403 Seryl-tRNA synthetase N-terminal domain UCH003_RS03285 PF00579 tRNA synthetases class I (W and Y) UCH003_RS03290 PF01202 Shikimate kinase UCH003_RS03295 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal UCH003_RS03295 PF01926 50S ribosome-binding GTPase UCH003_RS03300 PF00924 Mechanosensitive ion channel UCH003_RS03305 PF00892 EamA-like transporter family UCH003_RS03310 PF00793 DAHP synthetase I family UCH003_RS03315 PF03781 Sulfatase-modifying factor enzyme 1 UCH003_RS03315 PF12867 DinB superfamily UCH003_RS03320 PF00885 6,7-dimethyl-8-ribityllumazine synthase UCH003_RS03325 PF01029 NusB family UCH003_RS03330 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family UCH003_RS03375 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion UCH003_RS03380 PF00005 ABC transporter UCH003_RS03385 PF12704 MacB-like periplasmic core domain UCH003_RS03385 PF02687 FtsX-like permease family UCH003_RS03385 PF00005 ABC transporter UCH003_RS03410 PF13426 PAS domain UCH003_RS03410 PF00990 Diguanylate cyclase, GGDEF domain UCH003_RS03410 PF00563 EAL domain UCH003_RS03415 PF02322 Cytochrome bd terminal oxidase subunit II UCH003_RS03420 PF01654 Cytochrome bd terminal oxidase subunit I UCH003_RS03435 PF00924 Mechanosensitive ion channel UCH003_RS03435 PF05552 Conserved TM helix UCH003_RS03450 PF03807 NADP oxidoreductase coenzyme F420-dependent UCH003_RS03450 PF14748 Pyrroline-5-carboxylate reductase dimerisation UCH003_RS03455 PF00768 D-alanyl-D-alanine carboxypeptidase UCH003_RS03455 PF07943 Penicillin-binding protein 5, C-terminal domain UCH003_RS03460 PF03459 TOBE domain UCH003_RS03460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UCH003_RS03475 PF00528 Binding-protein-dependent transport system inner membrane component UCH003_RS03480 PF08402 TOBE domain UCH003_RS03480 PF00005 ABC transporter UCH003_RS03490 PF00528 Binding-protein-dependent transport system inner membrane component UCH003_RS03495 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain UCH003_RS03495 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain UCH003_RS03500 PF01205 Uncharacterized protein family UPF0029 UCH003_RS03500 PF09186 Domain of unknown function (DUF1949) UCH003_RS03505 PF04264 YceI-like domain UCH003_RS03510 PF04608 Phosphatidylglycerophosphatase A UCH003_RS03545 PF14659 Phage integrase, N-terminal SAM-like domain UCH003_RS03545 PF00589 Phage integrase family UCH003_RS03550 PF14306 PUA-like domain UCH003_RS03550 PF01747 ATP-sulfurylase UCH003_RS03555 PF00486 Transcriptional regulatory protein, C terminal UCH003_RS03555 PF00072 Response regulator receiver domain UCH003_RS03560 PF02542 YgbB family UCH003_RS03560 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase UCH003_RS03565 PF01883 Iron-sulfur cluster assembly protein UCH003_RS03565 PF10609 NUBPL iron-transfer P-loop NTPase UCH003_RS03570 PF14602 Hexapeptide repeat of succinyl-transferase UCH003_RS03570 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle UCH003_RS03575 PF00990 Diguanylate cyclase, GGDEF domain UCH003_RS03575 PF00072 Response regulator receiver domain UCH003_RS03590 PF07568 Histidine kinase UCH003_RS03590 PF12282 Signal transduction histidine kinase UCH003_RS03590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UCH003_RS03595 PF00072 Response regulator receiver domain UCH003_RS03610 PF12848 ABC transporter UCH003_RS03610 PF00005 ABC transporter UCH003_RS03630 PF02254 TrkA-N domain UCH003_RS03630 PF07885 Ion channel UCH003_RS03640 PF08668 HDOD domain UCH003_RS03640 PF00563 EAL domain UCH003_RS03660 PF00990 Diguanylate cyclase, GGDEF domain UCH003_RS03665 PF01380 SIS domain UCH003_RS03670 PF08335 GlnD PII-uridylyltransferase UCH003_RS03670 PF01966 HD domain UCH003_RS03680 PF00291 Pyridoxal-phosphate dependent enzyme UCH003_RS03695 PF04055 Radical SAM superfamily UCH003_RS03700 PF00860 Permease family UCH003_RS03715 PF00583 Acetyltransferase (GNAT) family UCH003_RS03715 PF08218 Citrate lyase ligase C-terminal domain UCH003_RS03720 PF06857 Malonate decarboxylase delta subunit (MdcD) UCH003_RS03725 PF03328 HpcH/HpaI aldolase/citrate lyase family UCH003_RS03730 PF04223 Citrate lyase, alpha subunit (CitF) UCH003_RS03735 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase UCH003_RS03735 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase UCH003_RS03775 PF08463 EcoEI R protein C-terminal UCH003_RS03775 PF04851 Type III restriction enzyme, res subunit UCH003_RS03775 PF00271 Helicase conserved C-terminal domain UCH003_RS03775 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) UCH003_RS03785 PF02384 N-6 DNA Methylase UCH003_RS03785 PF12161 HsdM N-terminal domain UCH003_RS03790 PF01420 Type I restriction modification DNA specificity domain UCH003_RS03795 PF13538 UvrD-like helicase C-terminal domain UCH003_RS03805 PF00117 Glutamine amidotransferase class-I UCH003_RS03850 PF13276 HTH-like domain UCH003_RS03850 PF13333 Integrase core domain UCH003_RS03850 PF00665 Integrase core domain UCH003_RS03890 PF07670 Nucleoside recognition UCH003_RS03905 PF03033 Glycosyltransferase family 28 N-terminal domain UCH003_RS03905 PF04101 Glycosyltransferase family 28 C-terminal domain UCH003_RS03910 PF01098 Cell cycle protein UCH003_RS03915 PF00460 Flagella basal body rod protein UCH003_RS03920 PF06429 Flagellar basal body rod FlgEFG protein C-terminal UCH003_RS03920 PF00460 Flagella basal body rod protein UCH003_RS03925 PF02049 Flagellar hook-basal body complex protein FliE UCH003_RS03935 PF00762 Ferrochelatase UCH003_RS03955 PF01411 tRNA synthetases class II (A) UCH003_RS03955 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain UCH003_RS03955 PF02272 DHHA1 domain UCH003_RS03965 PF02545 Maf-like protein UCH003_RS03970 PF00155 Aminotransferase class I and II UCH003_RS03975 PF00005 ABC transporter UCH003_RS03975 PF08352 Oligopeptide/dipeptide transporter, C-terminal region UCH003_RS03980 PF00905 Penicillin binding protein transpeptidase domain UCH003_RS03980 PF00912 Transglycosylase UCH003_RS03980 PF17092 Penicillin-binding protein OB-like domain UCH003_RS03985 PF00120 Glutamine synthetase, catalytic domain UCH003_RS03985 PF03951 Glutamine synthetase, beta-Grasp domain UCH003_RS03990 PF02811 PHP domain UCH003_RS04000 PF01136 Peptidase family U32 UCH003_RS04005 PF00731 AIR carboxylase UCH003_RS04015 PF02091 Glycyl-tRNA synthetase alpha subunit UCH003_RS04020 PF01784 NIF3 (NGG1p interacting factor 3) UCH003_RS04030 PF00534 Glycosyl transferases group 1 UCH003_RS04030 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) UCH003_RS04035 PF00849 RNA pseudouridylate synthase UCH003_RS04040 PF00448 SRP54-type protein, GTPase domain UCH003_RS04040 PF02881 SRP54-type protein, helical bundle domain UCH003_RS04040 PF02978 Signal peptide binding domain UCH003_RS04045 PF00886 Ribosomal protein S16 UCH003_RS04055 PF01782 RimM N-terminal domain UCH003_RS04060 PF01746 tRNA (Guanine-1)-methyltransferase UCH003_RS04065 PF01245 Ribosomal protein L19 UCH003_RS04075 PF00155 Aminotransferase class I and II UCH003_RS04095 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain UCH003_RS04095 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain UCH003_RS04100 PF00425 chorismate binding enzyme UCH003_RS04120 PF03466 LysR substrate binding domain UCH003_RS04120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UCH003_RS04125 PF13361 UvrD-like helicase C-terminal domain UCH003_RS04125 PF00580 UvrD/REP helicase N-terminal domain UCH003_RS04130 PF01509 TruB family pseudouridylate synthase (N terminal domain) UCH003_RS04135 PF02599 Global regulator protein family UCH003_RS04140 PF00288 GHMP kinases N terminal domain UCH003_RS04145 PF01668 SmpB protein UCH003_RS04155 PF02617 ATP-dependent Clp protease adaptor protein ClpS UCH003_RS04160 PF00004 ATPase family associated with various cellular activities (AAA) UCH003_RS04160 PF07724 AAA domain (Cdc48 subfamily) UCH003_RS04160 PF17871 AAA lid domain UCH003_RS04160 PF02861 Clp amino terminal domain, pathogenicity island component UCH003_RS04160 PF10431 C-terminal, D2-small domain, of ClpB protein UCH003_RS04165 PF03588 Leucyl/phenylalanyl-tRNA protein transferase UCH003_RS04170 PF02772 S-adenosylmethionine synthetase, central domain UCH003_RS04170 PF00438 S-adenosylmethionine synthetase, N-terminal domain UCH003_RS04170 PF02773 S-adenosylmethionine synthetase, C-terminal domain UCH003_RS04180 PF02699 Preprotein translocase subunit UCH003_RS04185 PF02355 Protein export membrane protein UCH003_RS04190 PF07549 SecD/SecF GG Motif UCH003_RS04190 PF02355 Protein export membrane protein UCH003_RS04195 PF08264 Anticodon-binding domain of tRNA UCH003_RS04195 PF00133 tRNA synthetases class I (I, L, M and V) UCH003_RS04195 PF09334 tRNA synthetases class I (M) UCH003_RS04195 PF13603 Leucyl-tRNA synthetase, Domain 2 UCH003_RS04205 PF00990 Diguanylate cyclase, GGDEF domain UCH003_RS04210 PF08245 Mur ligase middle domain UCH003_RS04215 PF01551 Peptidase family M23 UCH003_RS04215 PF04225 Opacity-associated protein A LysM-like domain UCH003_RS04225 PF17757 UvrB interaction domain UCH003_RS04225 PF00271 Helicase conserved C-terminal domain UCH003_RS04225 PF00270 DEAD/DEAH box helicase UCH003_RS04225 PF03461 TRCF domain UCH003_RS04225 PF02559 CarD-like/TRCF domain UCH003_RS04230 PF13277 YmdB-like protein UCH003_RS04245 PF01960 ArgJ family UCH003_RS04250 PF00830 Ribosomal L28 family UCH003_RS04255 PF00834 Ribulose-phosphate 3 epimerase family UCH003_RS04260 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase UCH003_RS04265 PF14579 Helix-hairpin-helix motif UCH003_RS04265 PF17657 Bacterial DNA polymerase III alpha subunit finger domain UCH003_RS04265 PF07733 Bacterial DNA polymerase III alpha NTPase domain UCH003_RS04265 PF02811 PHP domain UCH003_RS04265 PF00929 Exonuclease UCH003_RS04270 PF00132 Bacterial transferase hexapeptide (six repeats) UCH003_RS04275 PF02503 Polyphosphate kinase middle domain UCH003_RS04275 PF13090 Polyphosphate kinase C-terminal domain 2 UCH003_RS04275 PF17941 Polyphosphate kinase C-terminal domain 1 UCH003_RS04275 PF13089 Polyphosphate kinase N-terminal domain UCH003_RS04285 PF12344 Ultra-violet resistance protein B UCH003_RS04285 PF00271 Helicase conserved C-terminal domain UCH003_RS04285 PF04851 Type III restriction enzyme, res subunit UCH003_RS04285 PF02151 UvrB/uvrC motif UCH003_RS04285 PF17757 UvrB interaction domain UCH003_RS04305 PF07963 Prokaryotic N-terminal methylation motif UCH003_RS04310 PF18319 PriA DNA helicase Cys-rich region (CRR) domain UCH003_RS04310 PF00271 Helicase conserved C-terminal domain UCH003_RS04310 PF00270 DEAD/DEAH box helicase UCH003_RS04310 PF18074 Primosomal protein N C-terminal domain UCH003_RS04315 PF04551 GcpE protein UCH003_RS04320 PF03796 DnaB-like helicase C terminal domain UCH003_RS04320 PF00772 DnaB-like helicase N terminal domain UCH003_RS04320 PF00772 DnaB-like helicase N terminal domain UCH003_RS04320 PF03796 DnaB-like helicase C terminal domain UCH003_RS04330 PF03631 Virulence factor BrkB UCH003_RS04335 PF02913 FAD linked oxidases, C-terminal domain UCH003_RS04335 PF01565 FAD binding domain UCH003_RS04345 PF01551 Peptidase family M23 UCH003_RS04345 PF04225 Opacity-associated protein A LysM-like domain UCH003_RS04350 PF01544 CorA-like Mg2+ transporter protein UCH003_RS04355 PF00293 NUDIX domain UCH003_RS04360 PF03459 TOBE domain UCH003_RS04375 PF00795 Carbon-nitrogen hydrolase UCH003_RS04380 PF04023 FeoA domain UCH003_RS04385 PF07670 Nucleoside recognition UCH003_RS04385 PF07664 Ferrous iron transport protein B C terminus UCH003_RS04385 PF02421 Ferrous iron transport protein B UCH003_RS04390 PF01545 Cation efflux family UCH003_RS04390 PF16916 Dimerisation domain of Zinc Transporter UCH003_RS04395 PF04371 Porphyromonas-type peptidyl-arginine deiminase UCH003_RS04400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UCH003_RS04405 PF00072 Response regulator receiver domain UCH003_RS04405 PF00486 Transcriptional regulatory protein, C terminal UCH003_RS04410 PF04341 Protein of unknown function, DUF485 UCH003_RS04415 PF00474 Sodium:solute symporter family UCH003_RS04420 PF13193 AMP-binding enzyme C-terminal domain UCH003_RS04420 PF00501 AMP-binding enzyme UCH003_RS04420 PF16177 Acetyl-coenzyme A synthetase N-terminus UCH003_RS04440 PF00140 Sigma-70 factor, region 1.2 UCH003_RS04440 PF04542 Sigma-70 region 2 UCH003_RS04440 PF04539 Sigma-70 region 3 UCH003_RS04440 PF04545 Sigma-70, region 4 UCH003_RS04445 PF06429 Flagellar basal body rod FlgEFG protein C-terminal UCH003_RS04445 PF00460 Flagella basal body rod protein UCH003_RS04450 PF06429 Flagellar basal body rod FlgEFG protein C-terminal UCH003_RS04450 PF00460 Flagella basal body rod protein UCH003_RS04455 PF03591 AzlC protein UCH003_RS04465 PF03831 PhnA domain UCH003_RS04465 PF08274 PhnA Zinc-Ribbon UCH003_RS04495 PF00486 Transcriptional regulatory protein, C terminal UCH003_RS04495 PF00072 Response regulator receiver domain UCH003_RS04505 PF03707 Bacterial signalling protein N terminal repeat UCH003_RS04505 PF00563 EAL domain UCH003_RS04505 PF00990 Diguanylate cyclase, GGDEF domain UCH003_RS04515 PF00270 DEAD/DEAH box helicase UCH003_RS04515 PF00271 Helicase conserved C-terminal domain UCH003_RS04530 PF09382 RQC domain UCH003_RS04530 PF00570 HRDC domain UCH003_RS04530 PF00270 DEAD/DEAH box helicase UCH003_RS04530 PF16124 RecQ zinc-binding UCH003_RS04530 PF00271 Helicase conserved C-terminal domain UCH003_RS04535 PF09962 Uncharacterized conserved protein (DUF2196) UCH003_RS04545 PF00072 Response regulator receiver domain UCH003_RS04545 PF00990 Diguanylate cyclase, GGDEF domain UCH003_RS04560 PF13247 4Fe-4S dicluster domain UCH003_RS04565 PF00384 Molybdopterin oxidoreductase UCH003_RS04565 PF04879 Molybdopterin oxidoreductase Fe4S4 domain UCH003_RS04565 PF01568 Molydopterin dinucleotide binding domain UCH003_RS04570 PF13333 Integrase core domain UCH003_RS04570 PF13276 HTH-like domain UCH003_RS04570 PF00665 Integrase core domain UCH003_RS04590 PF01810 LysE type translocator UCH003_RS04595 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UCH003_RS04610 PF01794 Ferric reductase like transmembrane component UCH003_RS04615 PF00174 Oxidoreductase molybdopterin binding domain UCH003_RS04620 PF00732 GMC oxidoreductase UCH003_RS04620 PF05199 GMC oxidoreductase UCH003_RS04635 PF00486 Transcriptional regulatory protein, C terminal UCH003_RS04635 PF00072 Response regulator receiver domain UCH003_RS04640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UCH003_RS04645 PF00293 NUDIX domain UCH003_RS04645 PF09297 NADH pyrophosphatase zinc ribbon domain UCH003_RS04645 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain UCH003_RS04650 PF02040 Arsenical pump membrane protein UCH003_RS04660 PF00873 AcrB/AcrD/AcrF family UCH003_RS04665 PF00005 ABC transporter UCH003_RS04670 PF00694 Aconitase C-terminal domain UCH003_RS04675 PF00180 Isocitrate/isopropylmalate dehydrogenase UCH003_RS04690 PF13735 tRNA nucleotidyltransferase domain 2 putative UCH003_RS04690 PF12627 Probable RNA and SrmB- binding site of polymerase A UCH003_RS04690 PF01743 Poly A polymerase head domain UCH003_RS04695 PF00551 Formyl transferase UCH003_RS04695 PF01842 ACT domain UCH003_RS04700 PF00588 SpoU rRNA Methylase family UCH003_RS04715 PF03707 Bacterial signalling protein N terminal repeat UCH003_RS04715 PF00990 Diguanylate cyclase, GGDEF domain UCH003_RS04715 PF00563 EAL domain UCH003_RS04720 PF06865 Pyrimidine/purine nucleoside phosphorylase UCH003_RS04725 PF00484 Carbonic anhydrase UCH003_RS04740 PF02092 Glycyl-tRNA synthetase beta subunit UCH003_RS04745 PF01966 HD domain UCH003_RS04745 PF00072 Response regulator receiver domain UCH003_RS04770 PF00543 Nitrogen regulatory protein P-II UCH003_RS04775 PF00909 Ammonium Transporter Family UCH003_RS04780 PF00884 Sulfatase UCH003_RS04785 PF00892 EamA-like transporter family UCH003_RS04790 PF01810 LysE type translocator UCH003_RS04795 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UCH003_RS04795 PF02743 Cache domain UCH003_RS04795 PF00672 HAMP domain UCH003_RS04800 PF00672 HAMP domain UCH003_RS04800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UCH003_RS04805 PF02965 Vitamin B12 dependent methionine synthase, activation domain UCH003_RS04805 PF00809 Pterin binding enzyme UCH003_RS04805 PF02310 B12 binding domain UCH003_RS04805 PF02574 Homocysteine S-methyltransferase UCH003_RS04805 PF02607 B12 binding domain UCH003_RS04810 PF02146 Sir2 family UCH003_RS04855 PF01545 Cation efflux family UCH003_RS04865 PF00072 Response regulator receiver domain UCH003_RS04865 PF00486 Transcriptional regulatory protein, C terminal UCH003_RS04865 PF01627 Hpt domain UCH003_RS04870 PF13426 PAS domain UCH003_RS04870 PF00512 His Kinase A (phospho-acceptor) domain UCH003_RS04870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UCH003_RS04870 PF00672 HAMP domain UCH003_RS04875 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain UCH003_RS04875 PF01799 [2Fe-2S] binding domain UCH003_RS04875 PF00111 2Fe-2S iron-sulfur cluster binding domain UCH003_RS04875 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase UCH003_RS04880 PF01593 Flavin containing amine oxidoreductase UCH003_RS04900 PF06463 Molybdenum Cofactor Synthesis C UCH003_RS04900 PF04055 Radical SAM superfamily UCH003_RS04905 PF00501 AMP-binding enzyme UCH003_RS04905 PF14535 AMP-binding enzyme C-terminal domain UCH003_RS04910 PF13478 XdhC Rossmann domain UCH003_RS04910 PF02625 XdhC and CoxI family UCH003_RS04925 PF01595 Cyclin M transmembrane N-terminal domain UCH003_RS04925 PF03471 Transporter associated domain UCH003_RS04925 PF00571 CBS domain UCH003_RS04930 PF01641 SelR domain UCH003_RS04935 PF02080 TrkA-C domain UCH003_RS04935 PF02254 TrkA-N domain UCH003_RS04940 PF02386 Cation transport protein UCH003_RS04945 PF00072 Response regulator receiver domain UCH003_RS04945 PF00486 Transcriptional regulatory protein, C terminal UCH003_RS04950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UCH003_RS04950 PF02702 Osmosensitive K+ channel His kinase sensor domain UCH003_RS04950 PF13492 GAF domain UCH003_RS04950 PF13493 Domain of unknown function (DUF4118) UCH003_RS04950 PF00512 His Kinase A (phospho-acceptor) domain UCH003_RS04955 PF00593 TonB dependent receptor UCH003_RS04955 PF07715 TonB-dependent Receptor Plug Domain UCH003_RS04965 PF00501 AMP-binding enzyme UCH003_RS04970 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain UCH003_RS04970 PF00753 Metallo-beta-lactamase superfamily UCH003_RS04970 PF10996 Beta-Casp domain UCH003_RS04975 PF00512 His Kinase A (phospho-acceptor) domain UCH003_RS04975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UCH003_RS04975 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) UCH003_RS04975 PF00072 Response regulator receiver domain UCH003_RS04975 PF01627 Hpt domain UCH003_RS04975 PF00672 HAMP domain UCH003_RS04980 PF00072 Response regulator receiver domain UCH003_RS05010 PF02547 Queuosine biosynthesis protein UCH003_RS05015 PF00902 Sec-independent protein translocase protein (TatC) UCH003_RS05020 PF02416 mttA/Hcf106 family UCH003_RS05025 PF00563 EAL domain UCH003_RS05025 PF00990 Diguanylate cyclase, GGDEF domain UCH003_RS05025 PF03707 Bacterial signalling protein N terminal repeat UCH003_RS05030 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain UCH003_RS05030 PF02769 AIR synthase related protein, C-terminal domain UCH003_RS05030 PF00586 AIR synthase related protein, N-terminal domain UCH003_RS05050 PF00155 Aminotransferase class I and II UCH003_RS05055 PF00226 DnaJ domain UCH003_RS05055 PF05099 Tellurite resistance protein TerB UCH003_RS05060 PF03061 Thioesterase superfamily UCH003_RS05070 PF02600 Disulfide bond formation protein DsbB UCH003_RS05075 PF01808 AICARFT/IMPCHase bienzyme UCH003_RS05075 PF02142 MGS-like domain UCH003_RS05080 PF02705 K+ potassium transporter UCH003_RS05095 PF01883 Iron-sulfur cluster assembly protein UCH003_RS05105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UCH003_RS05105 PF00672 HAMP domain UCH003_RS05110 PF16326 ABC transporter C-terminal domain UCH003_RS05110 PF00005 ABC transporter UCH003_RS05110 PF12848 ABC transporter UCH003_RS05115 PF00672 HAMP domain UCH003_RS05115 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UCH003_RS05115 PF17202 Single cache domain 3 UCH003_RS05120 PF16491 CAAX prenyl protease N-terminal, five membrane helices UCH003_RS05120 PF01435 Peptidase family M48 UCH003_RS05125 PF02390 Putative methyltransferase UCH003_RS05125 PF05175 Methyltransferase small domain UCH003_RS05125 PF17827 PrmC N-terminal domain UCH003_RS05135 PF00091 Tubulin/FtsZ family, GTPase domain UCH003_RS05135 PF12327 FtsZ family, C-terminal domain UCH003_RS05140 PF02491 SHS2 domain inserted in FTSA UCH003_RS05145 PF13145 PPIC-type PPIASE domain UCH003_RS05150 PF00202 Aminotransferase class-III UCH003_RS05155 PF01795 MraW methylase family UCH003_RS05165 PF02646 RmuC family UCH003_RS05170 PF00403 Heavy-metal-associated domain UCH003_RS05185 PF08534 Redoxin UCH003_RS05205 PF05970 PIF1-like helicase UCH003_RS05205 PF02689 Helicase UCH003_RS05235 PF00580 UvrD/REP helicase N-terminal domain UCH003_RS05235 PF13361 UvrD-like helicase C-terminal domain UCH003_RS05240 PF00581 Rhodanese-like domain UCH003_RS05245 PF03190 Protein of unknown function, DUF255 UCH003_RS05255 PF00183 Hsp90 protein UCH003_RS05260 PF01553 Acyltransferase UCH003_RS05275 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase UCH003_RS05280 PF01259 SAICAR synthetase UCH003_RS05285 PF13180 PDZ domain UCH003_RS05285 PF03572 Peptidase family S41 UCH003_RS05290 PF17871 AAA lid domain UCH003_RS05290 PF07724 AAA domain (Cdc48 subfamily) UCH003_RS05290 PF02861 Clp amino terminal domain, pathogenicity island component UCH003_RS05290 PF00004 ATPase family associated with various cellular activities (AAA) UCH003_RS05290 PF10431 C-terminal, D2-small domain, of ClpB protein UCH003_RS05305 PF03737 Aldolase/RraA UCH003_RS05315 PF02310 B12 binding domain UCH003_RS05320 PF06368 Methylaspartate mutase E chain (MutE) UCH003_RS05325 PF13941 MutL protein UCH003_RS05330 PF00550 Phosphopantetheine attachment site UCH003_RS05330 PF00668 Condensation domain UCH003_RS05330 PF13193 AMP-binding enzyme C-terminal domain UCH003_RS05330 PF00501 AMP-binding enzyme UCH003_RS05335 PF00468 Ribosomal protein L34 UCH003_RS05340 PF00825 Ribonuclease P UCH003_RS05345 PF01809 Putative membrane protein insertion efficiency factor UCH003_RS05350 PF02096 60Kd inner membrane protein UCH003_RS05350 PF14849 YidC periplasmic domain UCH003_RS05360 PF10396 GTP-binding protein TrmE N-terminus UCH003_RS05360 PF12631 MnmE helical domain UCH003_RS05360 PF01926 50S ribosome-binding GTPase UCH003_RS05365 PF06965 Na+/H+ antiporter 1 UCH003_RS05370 PF00563 EAL domain UCH003_RS05370 PF03707 Bacterial signalling protein N terminal repeat UCH003_RS05370 PF00990 Diguanylate cyclase, GGDEF domain UCH003_RS05380 PF07516 SecA Wing and Scaffold domain UCH003_RS05380 PF01043 SecA preprotein cross-linking domain UCH003_RS05380 PF02810 SEC-C motif UCH003_RS05380 PF07517 SecA DEAD-like domain UCH003_RS05400 PF00072 Response regulator receiver domain UCH003_RS05400 PF00486 Transcriptional regulatory protein, C terminal UCH003_RS05405 PF13180 PDZ domain UCH003_RS05405 PF17820 PDZ domain UCH003_RS05410 PF00226 DnaJ domain UCH003_RS05410 PF01556 DnaJ C terminal domain UCH003_RS05410 PF00684 DnaJ central domain UCH003_RS05415 PF13411 MerR HTH family regulatory protein UCH003_RS05420 PF02254 TrkA-N domain UCH003_RS05420 PF00999 Sodium/hydrogen exchanger family UCH003_RS05425 PF06969 HemN C-terminal domain UCH003_RS05425 PF04055 Radical SAM superfamily UCH003_RS05430 PF00293 NUDIX domain UCH003_RS05435 PF00696 Amino acid kinase family UCH003_RS05435 PF01842 ACT domain UCH003_RS05435 PF13840 ACT domain UCH003_RS05445 PF12169 DNA polymerase III subunits gamma and tau domain III UCH003_RS05450 PF00809 Pterin binding enzyme UCH003_RS05460 PF01925 Sulfite exporter TauE/SafE UCH003_RS05465 PF12826 Helix-hairpin-helix motif UCH003_RS05465 PF03120 NAD-dependent DNA ligase OB-fold domain UCH003_RS05465 PF01653 NAD-dependent DNA ligase adenylation domain UCH003_RS05465 PF00533 BRCA1 C Terminus (BRCT) domain UCH003_RS05470 PF01479 S4 domain UCH003_RS05470 PF01728 FtsJ-like methyltransferase UCH003_RS05475 PF01687 Riboflavin kinase UCH003_RS05475 PF06574 FAD synthetase UCH003_RS05480 PF13847 Methyltransferase domain UCH003_RS05495 PF00771 FHIPEP family UCH003_RS05500 PF02082 Transcriptional regulator UCH003_RS05505 PF00312 Ribosomal protein S15 UCH003_RS05530 PF01025 GrpE UCH003_RS05535 PF00012 Hsp70 protein UCH003_RS05540 PF01966 HD domain UCH003_RS05545 PF03976 Polyphosphate kinase 2 (PPK2) UCH003_RS05550 PF02683 Cytochrome C biogenesis protein transmembrane region UCH003_RS05550 PF11412 Disulphide bond corrector protein DsbC UCH003_RS05560 PF02348 Cytidylyltransferase UCH003_RS05565 PF00291 Pyridoxal-phosphate dependent enzyme UCH003_RS05570 PF00696 Amino acid kinase family UCH003_RS05575 PF02606 Tetraacyldisaccharide-1-P 4'-kinase UCH003_RS05580 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family UCH003_RS05585 PF02540 NAD synthase UCH003_RS05595 PF01008 Initiation factor 2 subunit family UCH003_RS05595 PF03061 Thioesterase superfamily UCH003_RS05600 PF08003 Protein of unknown function (DUF1698) UCH003_RS05610 PF01546 Peptidase family M20/M25/M40 UCH003_RS05610 PF07687 Peptidase dimerisation domain UCH003_RS05620 PF10576 Iron-sulfur binding domain of endonuclease III UCH003_RS05620 PF00633 Helix-hairpin-helix motif UCH003_RS05620 PF00730 HhH-GPD superfamily base excision DNA repair protein UCH003_RS05630 PF01116 Fructose-bisphosphate aldolase class-II UCH003_RS05640 PF00815 Histidinol dehydrogenase UCH003_RS05645 PF08546 Ketopantoate reductase PanE/ApbA C terminal UCH003_RS05645 PF02558 Ketopantoate reductase PanE/ApbA UCH003_RS05650 PF00994 Probable molybdopterin binding domain UCH003_RS05655 PF03480 Bacterial extracellular solute-binding protein, family 7 UCH003_RS05660 PF00133 tRNA synthetases class I (I, L, M and V) UCH003_RS05660 PF10458 Valyl tRNA synthetase tRNA binding arm UCH003_RS05660 PF08264 Anticodon-binding domain of tRNA UCH003_RS05665 PF05230 MASE2 domain UCH003_RS05665 PF00990 Diguanylate cyclase, GGDEF domain UCH003_RS05670 PF00291 Pyridoxal-phosphate dependent enzyme UCH003_RS05675 PF02082 Transcriptional regulator UCH003_RS05680 PF01053 Cys/Met metabolism PLP-dependent enzyme UCH003_RS05695 PF00348 Polyprenyl synthetase UCH003_RS05700 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain UCH003_RS05700 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain UCH003_RS05700 PF01488 Shikimate / quinate 5-dehydrogenase UCH003_RS05705 PF04073 Aminoacyl-tRNA editing domain UCH003_RS05705 PF03129 Anticodon binding domain UCH003_RS05705 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) UCH003_RS05715 PF06965 Na+/H+ antiporter 1 UCH003_RS05715 PF13462 Thioredoxin UCH003_RS05720 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain UCH003_RS05720 PF03900 Porphobilinogen deaminase, C-terminal domain UCH003_RS05725 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UCH003_RS05740 PF02915 Rubrerythrin UCH003_RS05745 PF18644 Phage integrase SAM-like domain UCH003_RS05745 PF00589 Phage integrase family UCH003_RS05750 PF09424 Yqey-like protein UCH003_RS05755 PF00871 Acetokinase family UCH003_RS05760 PF01515 Phosphate acetyl/butaryl transferase UCH003_RS05760 PF07085 DRTGG domain UCH003_RS05765 PF01225 Mur ligase family, catalytic domain UCH003_RS05765 PF08245 Mur ligase middle domain UCH003_RS05765 PF02875 Mur ligase family, glutamate ligase domain UCH003_RS05770 PF00708 Acylphosphatase UCH003_RS05785 PF07478 D-ala D-ala ligase C-terminus UCH003_RS05785 PF01820 D-ala D-ala ligase N-terminus UCH003_RS05790 PF07499 RuvA, C-terminal domain UCH003_RS05790 PF01330 RuvA N terminal domain UCH003_RS05800 PF03023 Lipid II flippase MurJ UCH003_RS05805 PF01406 tRNA synthetases class I (C) catalytic domain UCH003_RS05805 PF09190 DALR domain UCH003_RS05810 PF00664 ABC transporter transmembrane region UCH003_RS05810 PF00005 ABC transporter UCH003_RS05815 PF01180 Dihydroorotate dehydrogenase UCH003_RS05825 PF00701 Dihydrodipicolinate synthetase family UCH003_RS05835 PF01066 CDP-alcohol phosphatidyltransferase UCH003_RS05840 PF02163 Peptidase family M50 UCH003_RS05840 PF17820 PDZ domain UCH003_RS05845 PF01168 Alanine racemase, N-terminal domain UCH003_RS05865 PF11849 Domain of unknown function (DUF3369) UCH003_RS05875 PF13247 4Fe-4S dicluster domain UCH003_RS05880 PF01568 Molydopterin dinucleotide binding domain UCH003_RS05880 PF12838 4Fe-4S dicluster domain UCH003_RS05880 PF04879 Molybdopterin oxidoreductase Fe4S4 domain UCH003_RS05880 PF00384 Molybdopterin oxidoreductase UCH003_RS05880 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region UCH003_RS05885 PF00384 Molybdopterin oxidoreductase UCH003_RS05885 PF01568 Molydopterin dinucleotide binding domain UCH003_RS05885 PF04879 Molybdopterin oxidoreductase Fe4S4 domain UCH003_RS05900 PF01914 MarC family integral membrane protein UCH003_RS05915 PF00005 ABC transporter UCH003_RS05955 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UCH003_RS05955 PF12729 Four helix bundle sensory module for signal transduction UCH003_RS05955 PF00672 HAMP domain UCH003_RS05965 PF00205 Thiamine pyrophosphate enzyme, central domain UCH003_RS05965 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain UCH003_RS05965 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain UCH003_RS05970 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II UCH003_RS05970 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase UCH003_RS05970 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg UCH003_RS05980 PF02629 CoA binding domain UCH003_RS05980 PF00549 CoA-ligase UCH003_RS05985 PF08442 ATP-grasp domain UCH003_RS05985 PF00549 CoA-ligase UCH003_RS05990 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain UCH003_RS05990 PF00056 lactate/malate dehydrogenase, NAD binding domain UCH003_RS05995 PF03971 Monomeric isocitrate dehydrogenase UCH003_RS06010 PF13419 Haloacid dehalogenase-like hydrolase UCH003_RS06020 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA UCH003_RS06025 PF02769 AIR synthase related protein, C-terminal domain UCH003_RS06025 PF00586 AIR synthase related protein, N-terminal domain UCH003_RS06030 PF01924 Hydrogenase formation hypA family UCH003_RS06035 PF01455 HupF/HypC family UCH003_RS06040 PF02492 CobW/HypB/UreG, nucleotide-binding domain UCH003_RS06065 PF01434 Peptidase family M41 UCH003_RS06065 PF06480 FtsH Extracellular UCH003_RS06065 PF17862 AAA+ lid domain UCH003_RS06065 PF00004 ATPase family associated with various cellular activities (AAA) UCH003_RS06070 PF04055 Radical SAM superfamily UCH003_RS06070 PF00919 Uncharacterized protein family UPF0004 UCH003_RS06080 PF01761 3-dehydroquinate synthase UCH003_RS06090 PF01702 Queuine tRNA-ribosyltransferase UCH003_RS06115 PF00072 Response regulator receiver domain UCH003_RS06115 PF00486 Transcriptional regulatory protein, C terminal UCH003_RS06120 PF00512 His Kinase A (phospho-acceptor) domain UCH003_RS06120 PF13188 PAS domain UCH003_RS06120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UCH003_RS06125 PF00939 Sodium:sulfate symporter transmembrane region UCH003_RS06130 PF05681 Fumarate hydratase (Fumerase) UCH003_RS06130 PF05683 Fumarase C-terminus UCH003_RS06135 PF05683 Fumarase C-terminus UCH003_RS06135 PF05681 Fumarate hydratase (Fumerase) UCH003_RS06145 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) UCH003_RS06150 PF03454 MoeA C-terminal region (domain IV) UCH003_RS06150 PF00994 Probable molybdopterin binding domain UCH003_RS06150 PF03453 MoeA N-terminal region (domain I and II) UCH003_RS06155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UCH003_RS06155 PF02743 Cache domain UCH003_RS06155 PF00672 HAMP domain UCH003_RS06170 PF02441 Flavoprotein UCH003_RS06175 PF01467 Cytidylyltransferase-like UCH003_RS06180 PF02223 Thymidylate kinase UCH003_RS06185 PF03129 Anticodon binding domain UCH003_RS06185 PF13393 Histidyl-tRNA synthetase UCH003_RS06190 PF17944 Arginine decarboxylase C-terminal helical extension UCH003_RS06190 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain UCH003_RS06190 PF17810 Arginine decarboxylase helical bundle domain UCH003_RS06195 PF00132 Bacterial transferase hexapeptide (six repeats) UCH003_RS06195 PF06426 Serine acetyltransferase, N-terminal UCH003_RS06200 PF00148 Nitrogenase component 1 type Oxidoreductase UCH003_RS06205 PF03139 Vanadium/alternative nitrogenase delta subunit UCH003_RS06210 PF00148 Nitrogenase component 1 type Oxidoreductase UCH003_RS06220 PF01590 GAF domain UCH003_RS06220 PF02954 Bacterial regulatory protein, Fis family UCH003_RS06220 PF00158 Sigma-54 interaction domain UCH003_RS06225 PF00148 Nitrogenase component 1 type Oxidoreductase UCH003_RS06230 PF00155 Aminotransferase class I and II UCH003_RS06235 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster UCH003_RS06235 PF07992 Pyridine nucleotide-disulphide oxidoreductase UCH003_RS06245 PF00132 Bacterial transferase hexapeptide (six repeats) UCH003_RS06245 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD UCH003_RS06250 PF10369 Small subunit of acetolactate synthase UCH003_RS06255 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain UCH003_RS06255 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain UCH003_RS06255 PF00205 Thiamine pyrophosphate enzyme, central domain UCH003_RS06260 PF02541 Ppx/GppA phosphatase family UCH003_RS06265 PF07992 Pyridine nucleotide-disulphide oxidoreductase UCH003_RS06280 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ UCH003_RS06285 PF04166 Pyridoxal phosphate biosynthetic protein PdxA UCH003_RS06290 PF08241 Methyltransferase domain UCH003_RS06295 PF00005 ABC transporter UCH003_RS06310 PF01891 Cobalt uptake substrate-specific transmembrane region UCH003_RS06310 PF13190 PDGLE domain UCH003_RS06330 PF00218 Indole-3-glycerol phosphate synthase UCH003_RS06340 PF03692 Putative zinc- or iron-chelating domain UCH003_RS06345 PF05175 Methyltransferase small domain UCH003_RS06355 PF07992 Pyridine nucleotide-disulphide oxidoreductase UCH003_RS06360 PF00171 Aldehyde dehydrogenase family UCH003_RS06365 PF00005 ABC transporter UCH003_RS06370 PF09335 SNARE associated Golgi protein UCH003_RS06385 PF01474 Class-II DAHP synthetase family UCH003_RS06390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UCH003_RS06390 PF00672 HAMP domain UCH003_RS06390 PF05227 CHASE3 domain UCH003_RS06395 PF00497 Bacterial extracellular solute-binding proteins, family 3 UCH003_RS06400 PF00528 Binding-protein-dependent transport system inner membrane component UCH003_RS06405 PF00528 Binding-protein-dependent transport system inner membrane component UCH003_RS06410 PF00005 ABC transporter UCH003_RS06420 PF13291 ACT domain UCH003_RS06420 PF00291 Pyridoxal-phosphate dependent enzyme UCH003_RS06425 PF13380 CoA binding domain UCH003_RS06430 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UCH003_RS06430 PF00672 HAMP domain UCH003_RS06430 PF02743 Cache domain UCH003_RS06435 PF05958 tRNA (Uracil-5-)-methyltransferase UCH003_RS06480 PF00486 Transcriptional regulatory protein, C terminal UCH003_RS06480 PF00072 Response regulator receiver domain UCH003_RS06485 PF00072 Response regulator receiver domain UCH003_RS06485 PF00512 His Kinase A (phospho-acceptor) domain UCH003_RS06485 PF00497 Bacterial extracellular solute-binding proteins, family 3 UCH003_RS06485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UCH003_RS06490 PF04879 Molybdopterin oxidoreductase Fe4S4 domain UCH003_RS06490 PF00384 Molybdopterin oxidoreductase UCH003_RS06490 PF01568 Molydopterin dinucleotide binding domain UCH003_RS06500 PF13247 4Fe-4S dicluster domain UCH003_RS06505 PF08448 PAS fold UCH003_RS06505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UCH003_RS06505 PF08447 PAS fold UCH003_RS06510 PF00486 Transcriptional regulatory protein, C terminal UCH003_RS06510 PF00072 Response regulator receiver domain UCH003_RS06515 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase UCH003_RS06520 PF00330 Aconitase family (aconitate hydratase) UCH003_RS06520 PF06434 Aconitate hydratase 2 N-terminus UCH003_RS06520 PF11791 Aconitate B N-terminal domain UCH003_RS06525 PF01580 FtsK/SpoIIIE family UCH003_RS06525 PF09397 Ftsk gamma domain UCH003_RS06525 PF17854 FtsK alpha domain UCH003_RS06530 PF00700 Bacterial flagellin C-terminal helical region UCH003_RS06530 PF00669 Bacterial flagellin N-terminal helical region UCH003_RS06535 PF00216 Bacterial DNA-binding protein UCH003_RS06540 PF01384 Phosphate transporter family UCH003_RS06555 PF13276 HTH-like domain UCH003_RS06555 PF13333 Integrase core domain UCH003_RS06555 PF00665 Integrase core domain UCH003_RS06565 PF07690 Major Facilitator Superfamily UCH003_RS06570 PF00501 AMP-binding enzyme UCH003_RS06570 PF01553 Acyltransferase UCH003_RS06575 PF01022 Bacterial regulatory protein, arsR family UCH003_RS06585 PF12147 Putative methyltransferase UCH003_RS06585 PF12146 Serine aminopeptidase, S33 UCH003_RS06590 PF01553 Acyltransferase UCH003_RS06600 PF01066 CDP-alcohol phosphatidyltransferase UCH003_RS06625 PF00999 Sodium/hydrogen exchanger family UCH003_RS06625 PF02254 TrkA-N domain UCH003_RS06630 PF00925 GTP cyclohydrolase II UCH003_RS06630 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase UCH003_RS06785 PF04233 Phage Mu protein F like protein UCH003_RS06800 PF13333 Integrase core domain UCH003_RS06800 PF00665 Integrase core domain UCH003_RS06800 PF13276 HTH-like domain UCH003_RS06815 PF04376 Arginine-tRNA-protein transferase, N terminus UCH003_RS06815 PF04377 Arginine-tRNA-protein transferase, C terminus UCH003_RS06825 PF04963 Sigma-54 factor, core binding domain UCH003_RS06825 PF00309 Sigma-54 factor, Activator interacting domain (AID) UCH003_RS06825 PF04552 Sigma-54, DNA binding domain UCH003_RS06830 PF12399 Branched-chain amino acid ATP-binding cassette transporter UCH003_RS06830 PF00005 ABC transporter UCH003_RS06840 PF00591 Glycosyl transferase family, a/b domain UCH003_RS06840 PF02885 Glycosyl transferase family, helical bundle domain UCH003_RS06845 PF01479 S4 domain UCH003_RS06850 PF00764 Arginosuccinate synthase UCH003_RS06855 PF00581 Rhodanese-like domain UCH003_RS06855 PF17773 UPF0176 acylphosphatase like domain UCH003_RS06860 PF01281 Ribosomal protein L9, N-terminal domain UCH003_RS06860 PF03948 Ribosomal protein L9, C-terminal domain UCH003_RS06865 PF00227 Proteasome subunit UCH003_RS06870 PF10431 C-terminal, D2-small domain, of ClpB protein UCH003_RS06870 PF07724 AAA domain (Cdc48 subfamily) UCH003_RS06875 PF07650 KH domain UCH003_RS06875 PF01926 50S ribosome-binding GTPase UCH003_RS06895 PF00263 Bacterial type II and III secretion system protein UCH003_RS06895 PF03958 Bacterial type II/III secretion system short domain UCH003_RS06910 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain UCH003_RS06910 PF00437 Type II/IV secretion system protein UCH003_RS06915 PF00482 Type II secretion system (T2SS), protein F UCH003_RS06925 PF02107 Flagellar L-ring protein UCH003_RS06940 PF02574 Homocysteine S-methyltransferase UCH003_RS06950 PF00873 AcrB/AcrD/AcrF family UCH003_RS06965 PF00440 Bacterial regulatory proteins, tetR family UCH003_RS06965 PF08359 YsiA-like protein, C-terminal region UCH003_RS06970 PF01327 Polypeptide deformylase UCH003_RS06985 PF12833 Helix-turn-helix domain UCH003_RS07000 PF05016 ParE toxin of type II toxin-antitoxin system, parDE UCH003_RS07005 PF00849 RNA pseudouridylate synthase UCH003_RS07005 PF01479 S4 domain UCH003_RS07010 PF08753 NikR C terminal nickel binding domain UCH003_RS07010 PF01402 Ribbon-helix-helix protein, copG family UCH003_RS07015 PF00708 Acylphosphatase UCH003_RS07015 PF17788 HypF Kae1-like domain UCH003_RS07015 PF07503 HypF finger UCH003_RS07015 PF01300 Telomere recombination UCH003_RS07025 PF01750 Hydrogenase maturation protease UCH003_RS07030 PF01292 Prokaryotic cytochrome b561 UCH003_RS07035 PF00374 Nickel-dependent hydrogenase UCH003_RS07040 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal UCH003_RS07040 PF10518 TAT (twin-arginine translocation) pathway signal sequence UCH003_RS07040 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit UCH003_RS07045 PF00374 Nickel-dependent hydrogenase UCH003_RS07065 PF00342 Phosphoglucose isomerase UCH003_RS07070 PF04055 Radical SAM superfamily UCH003_RS07070 PF08497 Radical SAM N-terminal UCH003_RS07090 PF03707 Bacterial signalling protein N terminal repeat UCH003_RS07090 PF00990 Diguanylate cyclase, GGDEF domain UCH003_RS07090 PF00563 EAL domain UCH003_RS07105 PF00813 FliP family UCH003_RS07110 PF12804 MobA-like NTP transferase domain UCH003_RS07110 PF00132 Bacterial transferase hexapeptide (six repeats) UCH003_RS07115 PF04127 DNA / pantothenate metabolism flavoprotein UCH003_RS07115 PF02441 Flavoprotein UCH003_RS07125 PF06750 Bacterial Peptidase A24 N-terminal domain UCH003_RS07125 PF01478 Type IV leader peptidase family UCH003_RS07135 PF01416 tRNA pseudouridine synthase UCH003_RS07140 PF01979 Amidohydrolase family UCH003_RS07145 PF00933 Glycosyl hydrolase family 3 N terminal domain UCH003_RS07150 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus UCH003_RS07150 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus UCH003_RS07155 PF02637 GatB domain UCH003_RS07155 PF02934 GatB/GatE catalytic domain UCH003_RS07160 PF02581 Thiamine monophosphate synthase UCH003_RS07170 PF00119 ATP synthase A chain UCH003_RS07175 PF01361 Tautomerase enzyme UCH003_RS07180 PF01740 STAS domain UCH003_RS07180 PF00916 Sulfate permease family UCH003_RS07190 PF12911 N-terminal TM domain of oligopeptide transport permease C UCH003_RS07190 PF00528 Binding-protein-dependent transport system inner membrane component UCH003_RS07195 PF07196 Flagellin hook IN motif UCH003_RS07195 PF06429 Flagellar basal body rod FlgEFG protein C-terminal UCH003_RS07215 PF02119 Flagellar P-ring protein UCH003_RS07235 PF07196 Flagellin hook IN motif UCH003_RS07235 PF07195 Flagellar hook-associated protein 2 C-terminus UCH003_RS07235 PF02465 Flagellar hook-associated protein 2 N-terminus UCH003_RS07240 PF02561 Flagellar protein FliS UCH003_RS07250 PF00474 Sodium:solute symporter family UCH003_RS07265 PF14535 AMP-binding enzyme C-terminal domain UCH003_RS07265 PF00501 AMP-binding enzyme UCH003_RS07275 PF00501 AMP-binding enzyme UCH003_RS07275 PF14535 AMP-binding enzyme C-terminal domain UCH003_RS07285 PF02463 RecF/RecN/SMC N terminal domain UCH003_RS07295 PF00672 HAMP domain UCH003_RS07295 PF17202 Single cache domain 3 UCH003_RS07295 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UCH003_RS07300 PF03441 FAD binding domain of DNA photolyase UCH003_RS07300 PF00875 DNA photolyase UCH003_RS07305 PF00881 Nitroreductase family UCH003_RS07320 PF02321 Outer membrane efflux protein UCH003_RS07325 PF00873 AcrB/AcrD/AcrF family UCH003_RS07330 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion UCH003_RS07340 PF01618 MotA/TolQ/ExbB proton channel family UCH003_RS07345 PF13677 Membrane MotB of proton-channel complex MotA/MotB UCH003_RS07345 PF00691 OmpA family UCH003_RS07350 PF16326 ABC transporter C-terminal domain UCH003_RS07350 PF12848 ABC transporter UCH003_RS07350 PF00005 ABC transporter UCH003_RS07360 PF00753 Metallo-beta-lactamase superfamily UCH003_RS07360 PF12706 Beta-lactamase superfamily domain UCH003_RS07365 PF00672 HAMP domain UCH003_RS07365 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UCH003_RS07365 PF12729 Four helix bundle sensory module for signal transduction UCH003_RS07375 PF11849 Domain of unknown function (DUF3369) UCH003_RS07390 PF02535 ZIP Zinc transporter UCH003_RS07395 PF02110 Hydroxyethylthiazole kinase family UCH003_RS07405 PF02581 Thiamine monophosphate synthase UCH003_RS07405 PF08543 Phosphomethylpyrimidine kinase UCH003_RS07410 PF00990 Diguanylate cyclase, GGDEF domain UCH003_RS07420 PF00990 Diguanylate cyclase, GGDEF domain UCH003_RS07420 PF00563 EAL domain UCH003_RS07420 PF03707 Bacterial signalling protein N terminal repeat UCH003_RS07425 PF00999 Sodium/hydrogen exchanger family UCH003_RS07425 PF02254 TrkA-N domain UCH003_RS07425 PF02080 TrkA-C domain UCH003_RS07435 PF00672 HAMP domain UCH003_RS07435 PF12729 Four helix bundle sensory module for signal transduction UCH003_RS07435 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UCH003_RS07440 PF01142 tRNA pseudouridine synthase D (TruD) UCH003_RS07445 PF00586 AIR synthase related protein, N-terminal domain UCH003_RS07445 PF02769 AIR synthase related protein, C-terminal domain UCH003_RS07470 PF13185 GAF domain UCH003_RS07470 PF00158 Sigma-54 interaction domain UCH003_RS07470 PF02954 Bacterial regulatory protein, Fis family UCH003_RS07475 PF06988 NifT/FixU protein UCH003_RS07480 PF00890 FAD binding domain UCH003_RS07480 PF02910 Fumarate reductase flavoprotein C-term UCH003_RS07490 PF00155 Aminotransferase class I and II UCH003_RS07495 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase UCH003_RS07500 PF11870 Domain of unknown function (DUF3390) UCH003_RS07500 PF13183 4Fe-4S dicluster domain UCH003_RS07500 PF02589 LUD domain UCH003_RS07505 PF02589 LUD domain UCH003_RS07525 PF05977 Transmembrane secretion effector UCH003_RS07540 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit UCH003_RS07550 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit UCH003_RS07555 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit UCH003_RS07555 PF00374 Nickel-dependent hydrogenase UCH003_RS07560 PF13247 4Fe-4S dicluster domain UCH003_RS07565 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA UCH003_RS07570 PF07992 Pyridine nucleotide-disulphide oxidoreductase UCH003_RS07570 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster UCH003_RS07570 PF13247 4Fe-4S dicluster domain UCH003_RS07575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UCH003_RS07575 PF03466 LysR substrate binding domain UCH003_RS07580 PF00330 Aconitase family (aconitate hydratase) UCH003_RS07585 PF00694 Aconitase C-terminal domain UCH003_RS07590 PF00561 alpha/beta hydrolase fold UCH003_RS07595 PF00795 Carbon-nitrogen hydrolase UCH003_RS07595 PF00583 Acetyltransferase (GNAT) family UCH003_RS07605 PF00072 Response regulator receiver domain UCH003_RS07605 PF00486 Transcriptional regulatory protein, C terminal UCH003_RS07610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UCH003_RS07620 PF11844 Domain of unknown function (DUF3364) UCH003_RS07620 PF00148 Nitrogenase component 1 type Oxidoreductase UCH003_RS07625 PF00148 Nitrogenase component 1 type Oxidoreductase UCH003_RS07635 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family UCH003_RS07650 PF00072 Response regulator receiver domain UCH003_RS07655 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle UCH003_RS07660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UCH003_RS07660 PF08448 PAS fold UCH003_RS07660 PF08447 PAS fold UCH003_RS07670 PF01568 Molydopterin dinucleotide binding domain UCH003_RS07670 PF00384 Molybdopterin oxidoreductase UCH003_RS07670 PF18364 Molybdopterin oxidoreductase N-terminal domain UCH003_RS07675 PF00672 HAMP domain UCH003_RS07675 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UCH003_RS07690 PF01063 Amino-transferase class IV UCH003_RS07695 PF00990 Diguanylate cyclase, GGDEF domain UCH003_RS07705 PF00324 Amino acid permease UCH003_RS07715 PF02567 Phenazine biosynthesis-like protein UCH003_RS07720 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ UCH003_RS07730 PF01863 Protein of unknown function DUF45 UCH003_RS07750 PF00563 EAL domain UCH003_RS07750 PF00990 Diguanylate cyclase, GGDEF domain UCH003_RS07750 PF03707 Bacterial signalling protein N terminal repeat UCH003_RS07755 PF00905 Penicillin binding protein transpeptidase domain UCH003_RS07790 PF04963 Sigma-54 factor, core binding domain UCH003_RS07790 PF00309 Sigma-54 factor, Activator interacting domain (AID) UCH003_RS07790 PF04552 Sigma-54, DNA binding domain UCH003_RS07805 PF04319 NifZ domain UCH003_RS07810 PF03206 Nitrogen fixation protein NifW UCH003_RS07815 PF00258 Flavodoxin UCH003_RS07820 PF03270 Protein of unknown function, DUF269 UCH003_RS07825 PF02579 Dinitrogenase iron-molybdenum cofactor UCH003_RS07830 PF01980 tRNA-methyltransferase O UCH003_RS07830 PF18389 TrmO C-terminal domain UCH003_RS07845 PF00148 Nitrogenase component 1 type Oxidoreductase UCH003_RS07850 PF00148 Nitrogenase component 1 type Oxidoreductase UCH003_RS07860 PF02579 Dinitrogenase iron-molybdenum cofactor UCH003_RS07865 PF00753 Metallo-beta-lactamase superfamily UCH003_RS07865 PF00258 Flavodoxin UCH003_RS07870 PF10442 FIST C domain UCH003_RS07870 PF00990 Diguanylate cyclase, GGDEF domain UCH003_RS07870 PF08495 FIST N domain UCH003_RS07870 PF00563 EAL domain UCH003_RS07875 PF00072 Response regulator receiver domain UCH003_RS07875 PF00486 Transcriptional regulatory protein, C terminal UCH003_RS07880 PF04055 Radical SAM superfamily UCH003_RS07880 PF02579 Dinitrogenase iron-molybdenum cofactor UCH003_RS07885 PF00682 HMGL-like UCH003_RS07900 PF03167 Uracil DNA glycosylase superfamily UCH003_RS07910 PF03061 Thioesterase superfamily UCH003_RS07915 PF18764 Nitrous oxide reductase propeller repeat UCH003_RS07915 PF00116 Cytochrome C oxidase subunit II, periplasmic domain UCH003_RS07915 PF18793 Nitrous oxide reductase propeller repeat 2 UCH003_RS07930 PF08212 Lipocalin-like domain UCH003_RS07935 PF00528 Binding-protein-dependent transport system inner membrane component UCH003_RS07940 PF00005 ABC transporter UCH003_RS07940 PF08402 TOBE domain UCH003_RS07955 PF02634 FdhD/NarQ family UCH003_RS07965 PF13247 4Fe-4S dicluster domain UCH003_RS07970 PF04879 Molybdopterin oxidoreductase Fe4S4 domain UCH003_RS07970 PF01568 Molydopterin dinucleotide binding domain UCH003_RS07970 PF00384 Molybdopterin oxidoreductase UCH003_RS07975 PF04879 Molybdopterin oxidoreductase Fe4S4 domain UCH003_RS07975 PF12838 4Fe-4S dicluster domain UCH003_RS07975 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region UCH003_RS07975 PF01568 Molydopterin dinucleotide binding domain UCH003_RS07975 PF00384 Molybdopterin oxidoreductase UCH003_RS07990 PF00899 ThiF family UCH003_RS08025 PF00005 ABC transporter UCH003_RS08050 PF06969 HemN C-terminal domain UCH003_RS08050 PF04055 Radical SAM superfamily UCH003_RS08055 PF03653 Uncharacterised protein family (UPF0093) UCH003_RS08060 PF05140 ResB-like family UCH003_RS08060 PF01578 Cytochrome C assembly protein UCH003_RS08065 PF03916 Polysulphide reductase, NrfD UCH003_RS08070 PF13247 4Fe-4S dicluster domain UCH003_RS08070 PF00037 4Fe-4S binding domain UCH003_RS08075 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase UCH003_RS08075 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase UCH003_RS08085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UCH003_RS08085 PF08447 PAS fold UCH003_RS08085 PF08448 PAS fold UCH003_RS08090 PF00486 Transcriptional regulatory protein, C terminal UCH003_RS08090 PF00072 Response regulator receiver domain UCH003_RS08095 PF13419 Haloacid dehalogenase-like hydrolase UCH003_RS08100 PF13649 Methyltransferase domain UCH003_RS08105 PF00440 Bacterial regulatory proteins, tetR family UCH003_RS08110 PF03109 ABC1 family UCH003_RS08130 PF13649 Methyltransferase domain UCH003_RS08160 PF02687 FtsX-like permease family UCH003_RS08165 PF00005 ABC transporter UCH003_RS08180 PF04264 YceI-like domain UCH003_RS08185 PF00149 Calcineurin-like phosphoesterase UCH003_RS08190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UCH003_RS08190 PF00672 HAMP domain UCH003_RS08190 PF00512 His Kinase A (phospho-acceptor) domain UCH003_RS08200 PF00717 Peptidase S24-like UCH003_RS08200 PF01726 LexA DNA binding domain UCH003_RS08315 PF04233 Phage Mu protein F like protein UCH003_RS08335 PF13333 Integrase core domain UCH003_RS08335 PF13276 HTH-like domain UCH003_RS08335 PF00665 Integrase core domain UCH003_RS08480 PF01867 CRISPR associated protein Cas1 UCH003_RS08495 PF18395 Cas3 C-terminal domain UCH003_RS08495 PF00270 DEAD/DEAH box helicase UCH003_RS08495 PF18019 HD domain UCH003_RS08520 PF04073 Aminoacyl-tRNA editing domain UCH003_RS08535 PF08447 PAS fold UCH003_RS08535 PF08448 PAS fold UCH003_RS08535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UCH003_RS08555 PF10442 FIST C domain UCH003_RS08555 PF00563 EAL domain UCH003_RS08555 PF08495 FIST N domain UCH003_RS08555 PF00990 Diguanylate cyclase, GGDEF domain UCH003_RS08560 PF00486 Transcriptional regulatory protein, C terminal UCH003_RS08560 PF00072 Response regulator receiver domain UCH003_RS08565 PF12833 Helix-turn-helix domain UCH003_RS08565 PF00072 Response regulator receiver domain UCH003_RS08575 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD UCH003_RS08580 PF01758 Sodium Bile acid symporter family UCH003_RS08590 PF09335 SNARE associated Golgi protein UCH003_RS08600 PF00005 ABC transporter UCH003_RS08600 PF00664 ABC transporter transmembrane region UCH003_RS08605 PF01966 HD domain UCH003_RS08605 PF12072 Domain of unknown function (DUF3552) UCH003_RS08615 PF00578 AhpC/TSA family UCH003_RS08620 PF00448 SRP54-type protein, GTPase domain UCH003_RS08625 PF18073 Rubredoxin metal binding domain UCH003_RS08630 PF03748 Flagellar basal body-associated protein FliL UCH003_RS08635 PF01648 4'-phosphopantetheinyl transferase superfamily UCH003_RS08650 PF00202 Aminotransferase class-III UCH003_RS08655 PF03458 UPF0126 domain UCH003_RS08660 PF03652 Holliday junction resolvase UCH003_RS08670 PF04073 Aminoacyl-tRNA editing domain UCH003_RS08675 PF01925 Sulfite exporter TauE/SafE UCH003_RS08690 PF03776 Septum formation topological specificity factor MinE UCH003_RS08695 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain UCH003_RS08700 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain UCH003_RS08700 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain UCH003_RS08710 PF00773 RNB domain UCH003_RS08715 PF06144 DNA polymerase III, delta subunit UCH003_RS08720 PF01250 Ribosomal protein S6 UCH003_RS08725 PF00436 Single-strand binding protein family UCH003_RS08730 PF01084 Ribosomal protein S18 UCH003_RS08735 PF02190 ATP-dependent protease La (LON) substrate-binding domain UCH003_RS08735 PF05362 Lon protease (S16) C-terminal proteolytic domain UCH003_RS08735 PF00004 ATPase family associated with various cellular activities (AAA) UCH003_RS08740 PF13525 Outer membrane lipoprotein UCH003_RS08745 PF02623 FliW protein UCH003_RS08770 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein UCH003_RS08770 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus UCH003_RS08775 PF04851 Type III restriction enzyme, res subunit UCH003_RS08775 PF00271 Helicase conserved C-terminal domain UCH003_RS08780 PF05193 Peptidase M16 inactive domain UCH003_RS08785 PF04055 Radical SAM superfamily UCH003_RS08800 PF00202 Aminotransferase class-III UCH003_RS08810 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain UCH003_RS08810 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain UCH003_RS08815 PF10502 Signal peptidase, peptidase S26 UCH003_RS08820 PF02163 Peptidase family M50 UCH003_RS08825 PF02502 Ribose/Galactose Isomerase UCH003_RS08835 PF00156 Phosphoribosyl transferase domain UCH003_RS08840 PF00291 Pyridoxal-phosphate dependent enzyme UCH003_RS08850 PF02789 Cytosol aminopeptidase family, N-terminal domain UCH003_RS08850 PF00883 Cytosol aminopeptidase family, catalytic domain UCH003_RS08855 PF00072 Response regulator receiver domain UCH003_RS08855 PF01339 CheB methylesterase UCH003_RS08860 PF01739 CheR methyltransferase, SAM binding domain UCH003_RS08880 PF01435 Peptidase family M48 UCH003_RS08885 PF08267 Cobalamin-independent synthase, N-terminal domain UCH003_RS08885 PF01717 Cobalamin-independent synthase, Catalytic domain UCH003_RS08905 PF01336 OB-fold nucleic acid binding domain UCH003_RS08905 PF00929 Exonuclease UCH003_RS08905 PF11490 DNA polymerase III polC-type N-terminus II UCH003_RS08905 PF07733 Bacterial DNA polymerase III alpha NTPase domain UCH003_RS08905 PF17657 Bacterial DNA polymerase III alpha subunit finger domain UCH003_RS08905 PF14579 Helix-hairpin-helix motif UCH003_RS08905 PF02811 PHP domain UCH003_RS08920 PF07683 Cobalamin synthesis protein cobW C-terminal domain UCH003_RS08920 PF02492 CobW/HypB/UreG, nucleotide-binding domain UCH003_RS08925 PF04328 Selenoprotein, putative UCH003_RS08930 PF02554 Carbon starvation protein CstA UCH003_RS08930 PF13722 5TM C-terminal transporter carbon starvation CstA UCH003_RS08935 PF00072 Response regulator receiver domain UCH003_RS08935 PF00486 Transcriptional regulatory protein, C terminal UCH003_RS08945 PF13472 GDSL-like Lipase/Acylhydrolase family UCH003_RS08950 PF00892 EamA-like transporter family UCH003_RS08955 PF02589 LUD domain UCH003_RS08960 PF13183 4Fe-4S dicluster domain UCH003_RS08960 PF02589 LUD domain UCH003_RS08960 PF11870 Domain of unknown function (DUF3390) UCH003_RS08965 PF02754 Cysteine-rich domain UCH003_RS08970 PF01810 LysE type translocator UCH003_RS08980 PF03006 Haemolysin-III related UCH003_RS08990 PF02581 Thiamine monophosphate synthase UCH003_RS08995 PF02743 Cache domain UCH003_RS08995 PF00672 HAMP domain UCH003_RS08995 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UCH003_RS09000 PF12833 Helix-turn-helix domain UCH003_RS09000 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain UCH003_RS09000 PF02805 Metal binding domain of Ada UCH003_RS09000 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain UCH003_RS09005 PF00464 Serine hydroxymethyltransferase UCH003_RS09010 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UCH003_RS09010 PF00672 HAMP domain UCH003_RS09010 PF02743 Cache domain UCH003_RS09015 PF01022 Bacterial regulatory protein, arsR family UCH003_RS09020 PF00403 Heavy-metal-associated domain UCH003_RS09030 PF12821 Threonine/Serine exporter, ThrE UCH003_RS09035 PF06738 Putative threonine/serine exporter UCH003_RS09045 PF00117 Glutamine amidotransferase class-I UCH003_RS09050 PF14403 Circularly permuted ATP-grasp type 2 UCH003_RS09075 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UCH003_RS09075 PF00672 HAMP domain UCH003_RS09075 PF02743 Cache domain UCH003_RS09080 PF08379 Bacterial transglutaminase-like N-terminal region UCH003_RS09080 PF01841 Transglutaminase-like superfamily UCH003_RS09085 PF04174 A circularly permuted ATPgrasp UCH003_RS09095 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion UCH003_RS09095 PF00529 HlyD membrane-fusion protein of T1SS UCH003_RS09100 PF00664 ABC transporter transmembrane region UCH003_RS09100 PF00005 ABC transporter UCH003_RS09100 PF03412 Peptidase C39 family UCH003_RS09155 PF00196 Bacterial regulatory proteins, luxR family UCH003_RS09155 PF00072 Response regulator receiver domain UCH003_RS09165 PF00664 ABC transporter transmembrane region UCH003_RS09165 PF00005 ABC transporter UCH003_RS09165 PF03412 Peptidase C39 family UCH003_RS09205 PF00005 ABC transporter UCH003_RS09225 PF00005 ABC transporter UCH003_RS09230 PF13237 4Fe-4S dicluster domain UCH003_RS09230 PF12801 4Fe-4S binding domain UCH003_RS09245 PF12838 4Fe-4S dicluster domain UCH003_RS09245 PF12800 4Fe-4S binding domain UCH003_RS09260 PF18793 Nitrous oxide reductase propeller repeat 2 UCH003_RS09260 PF18764 Nitrous oxide reductase propeller repeat UCH003_RS09260 PF00116 Cytochrome C oxidase subunit II, periplasmic domain UCH003_RS09265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UCH003_RS09265 PF00989 PAS fold UCH003_RS09265 PF00512 His Kinase A (phospho-acceptor) domain UCH003_RS09270 PF00486 Transcriptional regulatory protein, C terminal UCH003_RS09270 PF00072 Response regulator receiver domain UCH003_RS09275 PF00034 Cytochrome c UCH003_RS09280 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal UCH003_RS09280 PF00355 Rieske [2Fe-2S] domain UCH003_RS09285 PF00033 Cytochrome b/b6/petB UCH003_RS09285 PF00032 Cytochrome b(C-terminal)/b6/petD UCH003_RS09310 PF00004 ATPase family associated with various cellular activities (AAA) UCH003_RS09310 PF01434 Peptidase family M41 UCH003_RS09310 PF06480 FtsH Extracellular UCH003_RS09310 PF17862 AAA+ lid domain UCH003_RS09355 PF00990 Diguanylate cyclase, GGDEF domain UCH003_RS09355 PF00072 Response regulator receiver domain UCH003_RS09370 PF00166 Chaperonin 10 Kd subunit UCH003_RS09375 PF00118 TCP-1/cpn60 chaperonin family UCH003_RS09385 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) UCH003_RS09385 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 UCH003_RS09400 PF16868 NMT1-like family UCH003_RS09410 PF01709 Transcriptional regulator UCH003_RS09420 PF00672 HAMP domain UCH003_RS09420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UCH003_RS09420 PF12729 Four helix bundle sensory module for signal transduction UCH003_RS09425 PF03707 Bacterial signalling protein N terminal repeat UCH003_RS09425 PF00990 Diguanylate cyclase, GGDEF domain UCH003_RS09425 PF00563 EAL domain UCH003_RS09430 PF11849 Domain of unknown function (DUF3369) UCH003_RS09440 PF03475 3-alpha domain UCH003_RS09440 PF03473 MOSC domain UCH003_RS09445 PF01209 ubiE/COQ5 methyltransferase family UCH003_RS09450 PF00682 HMGL-like UCH003_RS09450 PF08502 LeuA allosteric (dimerisation) domain UCH003_RS09455 PF01926 50S ribosome-binding GTPase UCH003_RS09455 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal UCH003_RS09460 PF06968 Biotin and Thiamin Synthesis associated domain UCH003_RS09460 PF04055 Radical SAM superfamily UCH003_RS09465 PF10415 Fumarase C C-terminus UCH003_RS09465 PF00206 Lyase UCH003_RS09485 PF02906 Iron only hydrogenase large subunit, C-terminal domain UCH003_RS09485 PF00037 4Fe-4S binding domain UCH003_RS09495 PF13309 HTH domain UCH003_RS09495 PF08348 YheO-like PAS domain UCH003_RS09520 PF06123 Inner membrane protein CreD UCH003_RS09525 PF00270 DEAD/DEAH box helicase UCH003_RS09525 PF00271 Helicase conserved C-terminal domain UCH003_RS09525 PF03880 DbpA RNA binding domain UCH003_RS09530 PF00990 Diguanylate cyclase, GGDEF domain UCH003_RS09530 PF00072 Response regulator receiver domain UCH003_RS09535 PF02666 Phosphatidylserine decarboxylase UCH003_RS09540 PF10442 FIST C domain UCH003_RS09540 PF00990 Diguanylate cyclase, GGDEF domain UCH003_RS09540 PF00563 EAL domain UCH003_RS09540 PF08495 FIST N domain UCH003_RS09555 PF00032 Cytochrome b(C-terminal)/b6/petD UCH003_RS09555 PF00033 Cytochrome b/b6/petB UCH003_RS09560 PF00355 Rieske [2Fe-2S] domain UCH003_RS09560 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal UCH003_RS09565 PF00034 Cytochrome c UCH003_RS09570 PF08447 PAS fold UCH003_RS09570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UCH003_RS09570 PF08448 PAS fold UCH003_RS09575 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle UCH003_RS09580 PF00072 Response regulator receiver domain UCH003_RS09580 PF00486 Transcriptional regulatory protein, C terminal UCH003_RS09595 PF00384 Molybdopterin oxidoreductase UCH003_RS09595 PF18364 Molybdopterin oxidoreductase N-terminal domain UCH003_RS09595 PF01568 Molydopterin dinucleotide binding domain UCH003_RS09605 PF06071 Protein of unknown function (DUF933) UCH003_RS09605 PF01926 50S ribosome-binding GTPase UCH003_RS09625 PF00037 4Fe-4S binding domain UCH003_RS09625 PF12800 4Fe-4S binding domain UCH003_RS09625 PF13187 4Fe-4S dicluster domain UCH003_RS09630 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) UCH003_RS09635 PF13237 4Fe-4S dicluster domain UCH003_RS09635 PF12801 4Fe-4S binding domain UCH003_RS09640 PF12800 4Fe-4S binding domain UCH003_RS09640 PF12838 4Fe-4S dicluster domain UCH003_RS09645 PF01568 Molydopterin dinucleotide binding domain UCH003_RS09645 PF10518 TAT (twin-arginine translocation) pathway signal sequence UCH003_RS09645 PF04879 Molybdopterin oxidoreductase Fe4S4 domain UCH003_RS09645 PF00384 Molybdopterin oxidoreductase UCH003_RS09650 PF00293 NUDIX domain UCH003_RS09680 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family UCH003_RS09680 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain UCH003_RS09680 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain UCH003_RS09685 PF00892 EamA-like transporter family UCH003_RS09690 PF13247 4Fe-4S dicluster domain UCH003_RS09695 PF00361 Proton-conducting membrane transporter UCH003_RS09700 PF00146 NADH dehydrogenase UCH003_RS09705 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L UCH003_RS09710 PF00361 Proton-conducting membrane transporter UCH003_RS09710 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus UCH003_RS09715 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit UCH003_RS09715 PF00374 Nickel-dependent hydrogenase UCH003_RS09715 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit UCH003_RS09725 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit UCH003_RS09740 PF00005 ABC transporter UCH003_RS09745 PF00528 Binding-protein-dependent transport system inner membrane component UCH003_RS09755 PF13847 Methyltransferase domain UCH003_RS09760 PF09335 SNARE associated Golgi protein UCH003_RS09770 PF09335 SNARE associated Golgi protein UCH003_RS09785 PF01636 Phosphotransferase enzyme family UCH003_RS09800 PF04172 LrgB-like family UCH003_RS09820 PF01578 Cytochrome C assembly protein UCH003_RS09820 PF05140 ResB-like family UCH003_RS09825 PF02335 Cytochrome c552 UCH003_RS09830 PF03264 NapC/NirT cytochrome c family, N-terminal region UCH003_RS09840 PF00072 Response regulator receiver domain UCH003_RS09840 PF00196 Bacterial regulatory proteins, luxR family UCH003_RS09850 PF13333 Integrase core domain UCH003_RS09850 PF13276 HTH-like domain UCH003_RS09850 PF00665 Integrase core domain UCH003_RS09865 PF00749 tRNA synthetases class I (E and Q), catalytic domain UCH003_RS09865 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain UCH003_RS09870 PF00749 tRNA synthetases class I (E and Q), catalytic domain UCH003_RS09895 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain UCH003_RS09905 PF01588 Putative tRNA binding domain UCH003_RS09905 PF09334 tRNA synthetases class I (M) UCH003_RS09905 PF00133 tRNA synthetases class I (I, L, M and V) UCH003_RS09915 PF02130 Uncharacterized protein family UPF0054 UCH003_RS09920 PF01965 DJ-1/PfpI family UCH003_RS09925 PF00905 Penicillin binding protein transpeptidase domain UCH003_RS09925 PF03717 Penicillin-binding Protein dimerisation domain UCH003_RS09940 PF01926 50S ribosome-binding GTPase UCH003_RS09960 PF00475 Imidazoleglycerol-phosphate dehydratase UCH003_RS09965 PF05036 Sporulation related domain UCH003_RS09965 PF03330 Lytic transglycolase UCH003_RS09975 PF01026 TatD related DNase UCH003_RS09980 PF00990 Diguanylate cyclase, GGDEF domain UCH003_RS09985 PF02652 L-lactate permease UCH003_RS09990 PF13476 AAA domain UCH003_RS09995 PF01513 ATP-NAD kinase UCH003_RS10005 PF00990 Diguanylate cyclase, GGDEF domain UCH003_RS10010 PF02938 GAD domain UCH003_RS10010 PF00152 tRNA synthetases class II (D, K and N) UCH003_RS10010 PF01336 OB-fold nucleic acid binding domain UCH003_RS10025 PF01520 N-acetylmuramoyl-L-alanine amidase UCH003_RS10035 PF01479 S4 domain UCH003_RS10035 PF00579 tRNA synthetases class I (W and Y) UCH003_RS10040 PF13291 ACT domain UCH003_RS10040 PF04607 Region found in RelA / SpoT proteins UCH003_RS10040 PF02824 TGS domain UCH003_RS10045 PF01192 RNA polymerase Rpb6 UCH003_RS10050 PF00696 Amino acid kinase family UCH003_RS10065 PF00005 ABC transporter UCH003_RS10070 PF02390 Putative methyltransferase UCH003_RS10075 PF02903 Alpha amylase, N-terminal ig-like domain UCH003_RS10075 PF00128 Alpha amylase, catalytic domain UCH003_RS10080 PF00849 RNA pseudouridylate synthase UCH003_RS10080 PF01479 S4 domain UCH003_RS10085 PF01098 Cell cycle protein UCH003_RS10100 PF02254 TrkA-N domain UCH003_RS10100 PF02080 TrkA-C domain UCH003_RS10105 PF02386 Cation transport protein UCH003_RS10110 PF03788 LrgA family UCH003_RS10115 PF04172 LrgB-like family UCH003_RS10125 PF00512 His Kinase A (phospho-acceptor) domain UCH003_RS10125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UCH003_RS10130 PF14579 Helix-hairpin-helix motif UCH003_RS10130 PF02811 PHP domain UCH003_RS10130 PF07733 Bacterial DNA polymerase III alpha NTPase domain UCH003_RS10130 PF17657 Bacterial DNA polymerase III alpha subunit finger domain UCH003_RS10140 PF00672 HAMP domain UCH003_RS10140 PF17200 Single Cache domain 2 UCH003_RS10140 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UCH003_RS10140 PF00672 HAMP domain UCH003_RS10140 PF17200 Single Cache domain 2 UCH003_RS10140 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UCH003_RS10145 PF08447 PAS fold UCH003_RS10145 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UCH003_RS10150 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion UCH003_RS10150 PF00529 HlyD membrane-fusion protein of T1SS UCH003_RS10155 PF02321 Outer membrane efflux protein UCH003_RS10160 PF00724 NADH:flavin oxidoreductase / NADH oxidase family UCH003_RS10165 PF00135 Carboxylesterase family UCH003_RS10170 PF00990 Diguanylate cyclase, GGDEF domain UCH003_RS10170 PF10442 FIST C domain UCH003_RS10170 PF08495 FIST N domain UCH003_RS10170 PF00563 EAL domain UCH003_RS10175 PF00528 Binding-protein-dependent transport system inner membrane component UCH003_RS10180 PF00497 Bacterial extracellular solute-binding proteins, family 3 UCH003_RS10195 PF03653 Uncharacterised protein family (UPF0093) UCH003_RS10210 PF00563 EAL domain UCH003_RS10210 PF00990 Diguanylate cyclase, GGDEF domain UCH003_RS10210 PF03707 Bacterial signalling protein N terminal repeat UCH003_RS10220 PF13509 S1 domain UCH003_RS10220 PF17783 CvfB-like winged helix domain UCH003_RS10230 PF05192 MutS domain III UCH003_RS10230 PF05190 MutS family domain IV UCH003_RS10230 PF00488 MutS domain V UCH003_RS10230 PF05188 MutS domain II UCH003_RS10230 PF01624 MutS domain I UCH003_RS10235 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UCH003_RS10240 PF01965 DJ-1/PfpI family UCH003_RS10245 PF09285 Elongation factor P, C-terminal UCH003_RS10245 PF01132 Elongation factor P (EF-P) OB domain UCH003_RS10245 PF08207 Elongation factor P (EF-P) KOW-like domain UCH003_RS10255 PF00873 AcrB/AcrD/AcrF family UCH003_RS10260 PF00873 AcrB/AcrD/AcrF family UCH003_RS10265 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion UCH003_RS10280 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain UCH003_RS10280 PF01842 ACT domain UCH003_RS10280 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain UCH003_RS10290 PF00575 S1 RNA binding domain UCH003_RS10295 PF02401 LytB protein UCH003_RS10300 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) UCH003_RS10305 PF03147 Ferredoxin-fold anticodon binding domain UCH003_RS10305 PF03484 tRNA synthetase B5 domain UCH003_RS10305 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain UCH003_RS10305 PF01588 Putative tRNA binding domain UCH003_RS10310 PF01409 tRNA synthetases class II core domain (F) UCH003_RS10310 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain UCH003_RS10315 PF01230 HIT domain UCH003_RS10320 PF14698 Argininosuccinate lyase C-terminal UCH003_RS10320 PF00206 Lyase UCH003_RS10325 PF01293 Phosphoenolpyruvate carboxykinase UCH003_RS10330 PF00364 Biotin-requiring enzyme UCH003_RS10330 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain UCH003_RS10330 PF02785 Biotin carboxylase C-terminal domain UCH003_RS10330 PF00289 Biotin carboxylase, N-terminal domain UCH003_RS10340 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component UCH003_RS10350 PF03480 Bacterial extracellular solute-binding protein, family 7 UCH003_RS10355 PF00486 Transcriptional regulatory protein, C terminal UCH003_RS10355 PF00072 Response regulator receiver domain UCH003_RS10360 PF00989 PAS fold UCH003_RS10360 PF01627 Hpt domain UCH003_RS10360 PF00512 His Kinase A (phospho-acceptor) domain UCH003_RS10360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UCH003_RS10360 PF00497 Bacterial extracellular solute-binding proteins, family 3 UCH003_RS10360 PF00072 Response regulator receiver domain UCH003_RS10375 PF00137 ATP synthase subunit C UCH003_RS10380 PF00575 S1 RNA binding domain UCH003_RS10380 PF01138 3' exoribonuclease family, domain 1 UCH003_RS10380 PF00013 KH domain UCH003_RS10380 PF03725 3' exoribonuclease family, domain 2 UCH003_RS10380 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain UCH003_RS10395 PF02844 Phosphoribosylglycinamide synthetase, N domain UCH003_RS10395 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain UCH003_RS10395 PF02843 Phosphoribosylglycinamide synthetase, C domain UCH003_RS10405 PF00117 Glutamine amidotransferase class-I UCH003_RS10405 PF00958 GMP synthase C terminal domain UCH003_RS10405 PF02540 NAD synthase UCH003_RS10410 PF03600 Citrate transporter UCH003_RS10415 PF00890 FAD binding domain UCH003_RS10415 PF02910 Fumarate reductase flavoprotein C-term UCH003_RS10425 PF01541 GIY-YIG catalytic domain UCH003_RS10425 PF08459 UvrC Helix-hairpin-helix N-terminal UCH003_RS10425 PF02151 UvrB/uvrC motif UCH003_RS10440 PF00512 His Kinase A (phospho-acceptor) domain UCH003_RS10440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UCH003_RS10440 PF00672 HAMP domain UCH003_RS10440 PF01627 Hpt domain UCH003_RS10440 PF00072 Response regulator receiver domain UCH003_RS10440 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) UCH003_RS10445 PF00072 Response regulator receiver domain UCH003_RS10450 PF01634 ATP phosphoribosyltransferase UCH003_RS10455 PF03309 Type III pantothenate kinase UCH003_RS10465 PF15437 Plasminogen-binding protein pgbA C-terminal UCH003_RS10475 PF02686 Glu-tRNAGln amidotransferase C subunit UCH003_RS10480 PF00437 Type II/IV secretion system protein UCH003_RS10485 PF00990 Diguanylate cyclase, GGDEF domain UCH003_RS10495 PF01475 Ferric uptake regulator family UCH003_RS10500 PF01336 OB-fold nucleic acid binding domain UCH003_RS10500 PF00152 tRNA synthetases class II (D, K and N) UCH003_RS10505 PF00464 Serine hydroxymethyltransferase UCH003_RS10520 PF00425 chorismate binding enzyme UCH003_RS10520 PF04715 Anthranilate synthase component I, N terminal region UCH003_RS10525 PF08501 Shikimate dehydrogenase substrate binding domain UCH003_RS10530 PF13193 AMP-binding enzyme C-terminal domain UCH003_RS10530 PF00501 AMP-binding enzyme UCH003_RS10535 PF02132 RecR protein UCH003_RS10535 PF13662 Toprim domain UCH003_RS10545 PF00486 Transcriptional regulatory protein, C terminal UCH003_RS10545 PF00072 Response regulator receiver domain UCH003_RS10555 PF01556 DnaJ C terminal domain UCH003_RS10555 PF00226 DnaJ domain UCH003_RS10555 PF00684 DnaJ central domain UCH003_RS10570 PF02659 Putative manganese efflux pump UCH003_RS10575 PF01367 5'-3' exonuclease, C-terminal SAM fold UCH003_RS10575 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain UCH003_RS10575 PF00476 DNA polymerase family A UCH003_RS10585 PF00375 Sodium:dicarboxylate symporter family UCH003_RS10590 PF00375 Sodium:dicarboxylate symporter family UCH003_RS10595 PF17760 UvrA interaction domain UCH003_RS10595 PF17755 UvrA DNA-binding domain UCH003_RS10595 PF00005 ABC transporter UCH003_RS10605 PF13667 ThiC-associated domain UCH003_RS10605 PF01964 Radical SAM ThiC family UCH003_RS10610 PF01243 Pyridoxamine 5'-phosphate oxidase UCH003_RS10625 PF03960 ArsC family UCH003_RS10630 PF03372 Endonuclease/Exonuclease/phosphatase family UCH003_RS10635 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term UCH003_RS10655 PF03707 Bacterial signalling protein N terminal repeat UCH003_RS10655 PF00990 Diguanylate cyclase, GGDEF domain UCH003_RS10655 PF00563 EAL domain UCH003_RS10660 PF01207 Dihydrouridine synthase (Dus) UCH003_RS10670 PF01258 Prokaryotic dksA/traR C4-type zinc finger UCH003_RS10675 PF02590 Predicted SPOUT methyltransferase UCH003_RS10680 PF01039 Carboxyl transferase domain UCH003_RS10680 PF17848 Acetyl-coA carboxylase zinc finger domain UCH003_RS10690 PF07992 Pyridine nucleotide-disulphide oxidoreductase UCH003_RS10690 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster UCH003_RS10695 PF01645 Conserved region in glutamate synthase UCH003_RS10695 PF04898 Glutamate synthase central domain UCH003_RS10695 PF01493 GXGXG motif UCH003_RS10695 PF00310 Glutamine amidotransferases class-II UCH003_RS10705 PF01171 PP-loop family UCH003_RS10710 PF01048 Phosphorylase superfamily UCH003_RS10715 PF00698 Acyl transferase domain UCH003_RS10725 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase UCH003_RS10735 PF01389 OmpA-like transmembrane domain UCH003_RS10735 PF00691 OmpA family UCH003_RS10740 PF04052 TolB amino-terminal domain UCH003_RS10750 PF02472 Biopolymer transport protein ExbD/TolR UCH003_RS10755 PF01618 MotA/TolQ/ExbB proton channel family UCH003_RS10760 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain UCH003_RS10765 PF02874 ATP synthase alpha/beta family, beta-barrel domain UCH003_RS10765 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain UCH003_RS10770 PF00231 ATP synthase UCH003_RS10775 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain UCH003_RS10775 PF02874 ATP synthase alpha/beta family, beta-barrel domain UCH003_RS10775 PF00306 ATP synthase alpha/beta chain, C terminal domain UCH003_RS10780 PF00213 ATP synthase delta (OSCP) subunit UCH003_RS10785 PF00430 ATP synthase B/B' CF(0) UCH003_RS10790 PF00430 ATP synthase B/B' CF(0) UCH003_RS10795 PF17762 HTH domain found in ParB protein UCH003_RS10795 PF02195 ParB-like nuclease domain UCH003_RS10800 PF13614 AAA domain UCH003_RS10810 PF00551 Formyl transferase UCH003_RS10810 PF02911 Formyl transferase, C-terminal domain UCH003_RS10815 PF00696 Amino acid kinase family UCH003_RS10820 PF01018 GTP1/OBG UCH003_RS10820 PF01926 50S ribosome-binding GTPase UCH003_RS10825 PF01016 Ribosomal L27 protein UCH003_RS10830 PF00829 Ribosomal prokaryotic L21 protein UCH003_RS10835 PF00391 PEP-utilising enzyme, mobile domain UCH003_RS10835 PF02887 Pyruvate kinase, alpha/beta domain UCH003_RS10835 PF00224 Pyruvate kinase, barrel domain UCH003_RS10870 PF06039 Malate:quinone oxidoreductase (Mqo) UCH003_RS10875 PF01042 Endoribonuclease L-PSP UCH003_RS10880 PF01546 Peptidase family M20/M25/M40 UCH003_RS10880 PF07687 Peptidase dimerisation domain UCH003_RS10885 PF01713 Smr domain UCH003_RS10885 PF00488 MutS domain V UCH003_RS10895 PF08245 Mur ligase middle domain UCH003_RS10895 PF02875 Mur ligase family, glutamate ligase domain UCH003_RS10895 PF01225 Mur ligase family, catalytic domain UCH003_RS10900 PF00155 Aminotransferase class I and II UCH003_RS10910 PF00899 ThiF family UCH003_RS10920 PF02609 Exonuclease VII small subunit UCH003_RS10925 PF00561 alpha/beta hydrolase fold UCH003_RS10930 PF00478 IMP dehydrogenase / GMP reductase domain UCH003_RS10930 PF00571 CBS domain UCH003_RS10935 PF01425 Amidase UCH003_RS10940 PF00133 tRNA synthetases class I (I, L, M and V) UCH003_RS10940 PF08264 Anticodon-binding domain of tRNA UCH003_RS10945 PF02464 Competence-damaged protein UCH003_RS10945 PF18146 Damage-inducible protein CinA KH domain UCH003_RS10945 PF00994 Probable molybdopterin binding domain UCH003_RS10985 PF01578 Cytochrome C assembly protein UCH003_RS10985 PF05140 ResB-like family UCH003_RS10990 PF00005 ABC transporter UCH003_RS10995 PF00005 ABC transporter UCH003_RS10995 PF12399 Branched-chain amino acid ATP-binding cassette transporter UCH003_RS11000 PF02653 Branched-chain amino acid transport system / permease component UCH003_RS11000 PF11862 Domain of unknown function (DUF3382) UCH003_RS11005 PF02653 Branched-chain amino acid transport system / permease component UCH003_RS11025 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component UCH003_RS11030 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component UCH003_RS11035 PF03480 Bacterial extracellular solute-binding protein, family 7 UCH003_RS11040 PF12833 Helix-turn-helix domain UCH003_RS11040 PF00072 Response regulator receiver domain UCH003_RS11045 PF08448 PAS fold UCH003_RS11045 PF08447 PAS fold UCH003_RS11045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UCH003_RS11075 PF18381 YcaO cyclodehydratase C-terminal domain UCH003_RS11075 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding UCH003_RS11080 PF00270 DEAD/DEAH box helicase UCH003_RS11080 PF00271 Helicase conserved C-terminal domain UCH003_RS11095 PF03992 Antibiotic biosynthesis monooxygenase UCH003_RS11130 PF03063 Prismane/CO dehydrogenase family UCH003_RS11135 PF01255 Putative undecaprenyl diphosphate synthase UCH003_RS11140 PF07497 Rho termination factor, RNA-binding domain UCH003_RS11140 PF07498 Rho termination factor, N-terminal domain UCH003_RS11140 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain UCH003_RS11145 PF12170 DNA polymerase III tau subunit V interacting with alpha UCH003_RS11145 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding UCH003_RS11145 PF12169 DNA polymerase III subunits gamma and tau domain III UCH003_RS11170 PF00472 RF-1 domain UCH003_RS11170 PF03462 PCRF domain UCH003_RS11175 PF02569 Pantoate-beta-alanine ligase UCH003_RS11180 PF18693 TRAM domain UCH003_RS11180 PF00919 Uncharacterized protein family UPF0004 UCH003_RS11180 PF04055 Radical SAM superfamily UCH003_RS11185 PF01171 PP-loop family UCH003_RS11210 PF01938 TRAM domain UCH003_RS11210 PF04055 Radical SAM superfamily UCH003_RS11210 PF00919 Uncharacterized protein family UPF0004 UCH003_RS11220 PF13184 NusA-like KH domain UCH003_RS11220 PF08529 NusA N-terminal domain UCH003_RS11225 PF00528 Binding-protein-dependent transport system inner membrane component UCH003_RS11235 PF00121 Triosephosphate isomerase UCH003_RS11240 PF00162 Phosphoglycerate kinase UCH003_RS11245 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain UCH003_RS11245 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain UCH003_RS11250 PF01467 Cytidylyltransferase-like UCH003_RS11255 PF00034 Cytochrome c UCH003_RS11255 PF03150 Di-haem cytochrome c peroxidase UCH003_RS11275 PF00072 Response regulator receiver domain UCH003_RS11275 PF00990 Diguanylate cyclase, GGDEF domain UCH003_RS11285 PF00750 tRNA synthetases class I (R) UCH003_RS11285 PF05746 DALR anticodon binding domain UCH003_RS11285 PF03485 Arginyl tRNA synthetase N terminal domain UCH003_RS11290 PF02416 mttA/Hcf106 family UCH003_RS11295 PF02416 mttA/Hcf106 family UCH003_RS11300 PF00625 Guanylate kinase UCH003_RS11310 PF01311 Bacterial export proteins, family 1 UCH003_RS11315 PF00005 ABC transporter UCH003_RS11320 PF00889 Elongation factor TS UCH003_RS11325 PF00318 Ribosomal protein S2 UCH003_RS11340 PF00290 Tryptophan synthase alpha chain UCH003_RS11350 PF02548 Ketopantoate hydroxymethyltransferase UCH003_RS11355 PF05491 RuvB C-terminal winged helix domain UCH003_RS11355 PF05496 Holliday junction DNA helicase RuvB P-loop domain UCH003_RS11355 PF17864 RuvB AAA lid domain UCH003_RS11360 PF01594 AI-2E family transporter UCH003_RS11365 PF00350 Dynamin family UCH003_RS11370 PF00350 Dynamin family UCH003_RS11375 PF13183 4Fe-4S dicluster domain UCH003_RS11375 PF13085 2Fe-2S iron-sulfur cluster binding domain UCH003_RS11380 PF02910 Fumarate reductase flavoprotein C-term UCH003_RS11380 PF00890 FAD binding domain UCH003_RS11385 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit UCH003_RS11390 PF01790 Prolipoprotein diacylglyceryl transferase UCH003_RS11395 PF00990 Diguanylate cyclase, GGDEF domain UCH003_RS11395 PF08448 PAS fold UCH003_RS11410 PF00072 Response regulator receiver domain UCH003_RS11415 PF02810 SEC-C motif UCH003_RS11420 PF07690 Major Facilitator Superfamily UCH003_RS11425 PF00990 Diguanylate cyclase, GGDEF domain UCH003_RS11425 PF08448 PAS fold UCH003_RS11430 PF01810 LysE type translocator UCH003_RS11465 PF00145 C-5 cytosine-specific DNA methylase UCH003_RS11470 PF02754 Cysteine-rich domain UCH003_RS11475 PF06969 HemN C-terminal domain UCH003_RS11475 PF04055 Radical SAM superfamily UCH003_RS11480 PF10788 Protein of unknown function (DUF2603) UCH003_RS11485 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain UCH003_RS11485 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain UCH003_RS11490 PF00490 Delta-aminolevulinic acid dehydratase UCH003_RS11495 PF00925 GTP cyclohydrolase II UCH003_RS11505 PF01741 Large-conductance mechanosensitive channel, MscL UCH003_RS11510 PF02777 Iron/manganese superoxide dismutases, C-terminal domain UCH003_RS11510 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain UCH003_RS11520 PF02743 Cache domain UCH003_RS11520 PF00672 HAMP domain UCH003_RS11520 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UCH003_RS11525 PF02527 rRNA small subunit methyltransferase G UCH003_RS11545 PF00842 Alanine racemase, C-terminal domain UCH003_RS11545 PF01168 Alanine racemase, N-terminal domain UCH003_RS11560 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 UCH003_RS11565 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit UCH003_RS11570 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit UCH003_RS11570 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit UCH003_RS11580 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region UCH003_RS11580 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit UCH003_RS11580 PF10531 SLBB domain UCH003_RS11595 PF00361 Proton-conducting membrane transporter UCH003_RS11600 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus UCH003_RS11600 PF00361 Proton-conducting membrane transporter UCH003_RS11605 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus UCH003_RS11605 PF00361 Proton-conducting membrane transporter UCH003_RS11610 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L UCH003_RS11615 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 UCH003_RS11620 PF12838 4Fe-4S dicluster domain UCH003_RS11625 PF00146 NADH dehydrogenase UCH003_RS11630 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region UCH003_RS11630 PF00384 Molybdopterin oxidoreductase UCH003_RS11630 PF01568 Molydopterin dinucleotide binding domain UCH003_RS11630 PF04879 Molybdopterin oxidoreductase Fe4S4 domain UCH003_RS11640 PF08447 PAS fold UCH003_RS11640 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UCH003_RS11645 PF02743 Cache domain UCH003_RS11645 PF00672 HAMP domain UCH003_RS11645 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UCH003_RS11650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UCH003_RS11650 PF08448 PAS fold UCH003_RS11650 PF08447 PAS fold UCH003_RS11655 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle UCH003_RS11660 PF00072 Response regulator receiver domain UCH003_RS11660 PF00486 Transcriptional regulatory protein, C terminal UCH003_RS11670 PF00384 Molybdopterin oxidoreductase UCH003_RS11670 PF18364 Molybdopterin oxidoreductase N-terminal domain UCH003_RS11670 PF01568 Molydopterin dinucleotide binding domain UCH003_RS11685 PF00892 EamA-like transporter family UCH003_RS11695 PF03180 NLPA lipoprotein UCH003_RS11700 PF00528 Binding-protein-dependent transport system inner membrane component UCH003_RS11705 PF00005 ABC transporter UCH003_RS11705 PF09383 NIL domain UCH003_RS11710 PF00679 Elongation factor G C-terminus UCH003_RS11710 PF00009 Elongation factor Tu GTP binding domain UCH003_RS11710 PF14492 Elongation Factor G, domain II UCH003_RS11710 PF03764 Elongation factor G, domain IV UCH003_RS11710 PF03144 Elongation factor Tu domain 2 UCH003_RS11715 PF00177 Ribosomal protein S7p/S5e UCH003_RS11720 PF00164 Ribosomal protein S12/S23 UCH003_RS11725 PF04997 RNA polymerase Rpb1, domain 1 UCH003_RS11725 PF00623 RNA polymerase Rpb1, domain 2 UCH003_RS11725 PF04983 RNA polymerase Rpb1, domain 3 UCH003_RS11725 PF05000 RNA polymerase Rpb1, domain 4 UCH003_RS11725 PF04998 RNA polymerase Rpb1, domain 5 UCH003_RS11730 PF04560 RNA polymerase Rpb2, domain 7 UCH003_RS11730 PF00562 RNA polymerase Rpb2, domain 6 UCH003_RS11730 PF04565 RNA polymerase Rpb2, domain 3 UCH003_RS11730 PF04561 RNA polymerase Rpb2, domain 2 UCH003_RS11730 PF04563 RNA polymerase beta subunit UCH003_RS11730 PF10385 RNA polymerase beta subunit external 1 domain UCH003_RS11735 PF00542 Ribosomal protein L7/L12 C-terminal domain UCH003_RS11735 PF16320 Ribosomal protein L7/L12 dimerisation domain UCH003_RS11740 PF00466 Ribosomal protein L10 UCH003_RS11745 PF00687 Ribosomal protein L1p/L10e family UCH003_RS11750 PF03946 Ribosomal protein L11, N-terminal domain UCH003_RS11750 PF00298 Ribosomal protein L11, RNA binding domain UCH003_RS11755 PF02357 Transcription termination factor nusG UCH003_RS11765 PF00471 Ribosomal protein L33 UCH003_RS11770 PF00009 Elongation factor Tu GTP binding domain UCH003_RS11770 PF03143 Elongation factor Tu C-terminal domain UCH003_RS11770 PF03144 Elongation factor Tu domain 2 UCH003_RS11795 PF03883 Peroxide stress protein YaaA UCH003_RS11805 PF00990 Diguanylate cyclase, GGDEF domain UCH003_RS11805 PF00563 EAL domain UCH003_RS11805 PF03707 Bacterial signalling protein N terminal repeat UCH003_RS11810 PF00171 Aldehyde dehydrogenase family UCH003_RS11810 PF18327 Proline utilization A proline dehydrogenase N-terminal domain UCH003_RS11810 PF01619 Proline dehydrogenase UCH003_RS11810 PF14850 DNA-binding domain of Proline dehydrogenase UCH003_RS11815 PF00005 ABC transporter UCH003_RS11820 PF00005 ABC transporter UCH003_RS11820 PF12399 Branched-chain amino acid ATP-binding cassette transporter UCH003_RS11830 PF02653 Branched-chain amino acid transport system / permease component UCH003_RS11835 PF13458 Periplasmic binding protein UCH003_RS11850 PF00106 short chain dehydrogenase UCH003_RS11855 PF09905 DNA-binding protein VF530 UCH003_RS11880 PF07286 Protein of unknown function (DUF1445) UCH003_RS11890 PF00085 Thioredoxin UCH003_RS11910 PF00990 Diguanylate cyclase, GGDEF domain UCH003_RS11910 PF10442 FIST C domain UCH003_RS11910 PF08495 FIST N domain UCH003_RS11910 PF00563 EAL domain UCH003_RS11935 PF01965 DJ-1/PfpI family UCH003_RS11940 PF01965 DJ-1/PfpI family UCH003_RS11960 PF00350 Dynamin family UCH003_RS11970 PF01734 Patatin-like phospholipase UCH003_RS12010 PF09364 XFP N-terminal domain UCH003_RS12010 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase UCH003_RS12010 PF09363 XFP C-terminal domain UCH003_RS12020 PF00056 lactate/malate dehydrogenase, NAD binding domain UCH003_RS12020 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain UCH003_RS12025 PF03707 Bacterial signalling protein N terminal repeat UCH003_RS12025 PF00990 Diguanylate cyclase, GGDEF domain UCH003_RS12025 PF00563 EAL domain UCH003_RS12030 PF00672 HAMP domain UCH003_RS12030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UCH003_RS12030 PF17202 Single cache domain 3 UCH003_RS12035 PF00486 Transcriptional regulatory protein, C terminal UCH003_RS12035 PF00072 Response regulator receiver domain UCH003_RS12045 PF00672 HAMP domain UCH003_RS12045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UCH003_RS12055 PF16868 NMT1-like family UCH003_RS12065 PF04055 Radical SAM superfamily UCH003_RS12070 PF01208 Uroporphyrinogen decarboxylase (URO-D) UCH003_RS12080 PF02774 Semialdehyde dehydrogenase, dimerisation domain UCH003_RS12080 PF01118 Semialdehyde dehydrogenase, NAD binding domain UCH003_RS12085 PF00158 Sigma-54 interaction domain UCH003_RS12085 PF00072 Response regulator receiver domain UCH003_RS12100 PF03989 DNA gyrase C-terminal domain, beta-propeller UCH003_RS12100 PF00521 DNA gyrase/topoisomerase IV, subunit A UCH003_RS12120 PF00156 Phosphoribosyl transferase domain UCH003_RS12125 PF00679 Elongation factor G C-terminus UCH003_RS12125 PF00009 Elongation factor Tu GTP binding domain UCH003_RS12125 PF03144 Elongation factor Tu domain 2 UCH003_RS12125 PF06421 GTP-binding protein LepA C-terminus UCH003_RS12130 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase UCH003_RS12130 PF14572 Phosphoribosyl synthetase-associated domain UCH003_RS12150 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family UCH003_RS12155 PF08889 WbqC-like protein family UCH003_RS12160 PF00535 Glycosyl transferase family 2 UCH003_RS12175 PF04509 CheC-like family UCH003_RS12175 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term UCH003_RS12180 PF02154 Flagellar motor switch protein FliM UCH003_RS12180 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term UCH003_RS12185 PF04539 Sigma-70 region 3 UCH003_RS12185 PF04545 Sigma-70, region 4 UCH003_RS12185 PF04542 Sigma-70 region 2 UCH003_RS12195 PF10609 NUBPL iron-transfer P-loop NTPase UCH003_RS12200 PF00448 SRP54-type protein, GTPase domain UCH003_RS12205 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) UCH003_RS12210 PF00557 Metallopeptidase family M24 UCH003_RS12210 PF01321 Creatinase/Prolidase N-terminal domain UCH003_RS12215 PF01220 Dehydroquinase class II UCH003_RS12220 PF01979 Amidohydrolase family UCH003_RS12225 PF01343 Peptidase family S49 UCH003_RS12230 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) UCH003_RS12230 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 UCH003_RS12235 PF03601 Conserved hypothetical protein 698 UCH003_RS12240 PF03466 LysR substrate binding domain UCH003_RS12240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UCH003_RS12245 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase UCH003_RS12250 PF00892 EamA-like transporter family UCH003_RS12255 PF00962 Adenosine/AMP deaminase UCH003_RS12290 PF02601 Exonuclease VII, large subunit UCH003_RS12290 PF13742 OB-fold nucleic acid binding domain UCH003_RS12295 PF01209 ubiE/COQ5 methyltransferase family UCH003_RS12305 PF01368 DHH family UCH003_RS12305 PF02833 DHHA2 domain UCH003_RS12310 PF07715 TonB-dependent Receptor Plug Domain UCH003_RS12310 PF00593 TonB dependent receptor UCH003_RS12320 PF01618 MotA/TolQ/ExbB proton channel family UCH003_RS12325 PF02472 Biopolymer transport protein ExbD/TolR UCH003_RS12345 PF06969 HemN C-terminal domain UCH003_RS12345 PF04055 Radical SAM superfamily UCH003_RS12355 PF00512 His Kinase A (phospho-acceptor) domain UCH003_RS12355 PF00672 HAMP domain UCH003_RS12355 PF13426 PAS domain UCH003_RS12355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UCH003_RS12360 PF00486 Transcriptional regulatory protein, C terminal UCH003_RS12360 PF00072 Response regulator receiver domain UCH003_RS12365 PF03916 Polysulphide reductase, NrfD UCH003_RS12370 PF13247 4Fe-4S dicluster domain UCH003_RS12375 PF00384 Molybdopterin oxidoreductase UCH003_RS12375 PF04879 Molybdopterin oxidoreductase Fe4S4 domain UCH003_RS12375 PF01568 Molydopterin dinucleotide binding domain UCH003_RS12380 PF00563 EAL domain UCH003_RS12380 PF00990 Diguanylate cyclase, GGDEF domain UCH003_RS12380 PF10442 FIST C domain UCH003_RS12380 PF08495 FIST N domain UCH003_RS12385 PF03916 Polysulphide reductase, NrfD UCH003_RS12390 PF13247 4Fe-4S dicluster domain UCH003_RS12395 PF10518 TAT (twin-arginine translocation) pathway signal sequence UCH003_RS12395 PF04879 Molybdopterin oxidoreductase Fe4S4 domain UCH003_RS12395 PF00384 Molybdopterin oxidoreductase UCH003_RS12395 PF01568 Molydopterin dinucleotide binding domain UCH003_RS12400 PF00155 Aminotransferase class I and II UCH003_RS12400 PF00392 Bacterial regulatory proteins, gntR family UCH003_RS12405 PF01243 Pyridoxamine 5'-phosphate oxidase UCH003_RS12415 PF08448 PAS fold UCH003_RS12415 PF00990 Diguanylate cyclase, GGDEF domain UCH003_RS12420 PF00023 Ankyrin repeat UCH003_RS12420 PF12796 Ankyrin repeats (3 copies) UCH003_RS12425 PF05430 S-adenosyl-L-methionine-dependent methyltransferase UCH003_RS12425 PF01266 FAD dependent oxidoreductase UCH003_RS12435 PF13442 Cytochrome C oxidase, cbb3-type, subunit III UCH003_RS12445 PF00486 Transcriptional regulatory protein, C terminal UCH003_RS12445 PF00072 Response regulator receiver domain UCH003_RS12450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UCH003_RS12455 PF00313 'Cold-shock' DNA-binding domain UCH003_RS12460 PF08448 PAS fold UCH003_RS12460 PF08447 PAS fold UCH003_RS12460 PF00990 Diguanylate cyclase, GGDEF domain UCH003_RS12460 PF00563 EAL domain UCH003_RS12470 PF01872 RibD C-terminal domain UCH003_RS12470 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region UCH003_RS12475 PF02576 RimP N-terminal domain UCH003_RS12475 PF17384 RimP C-terminal SH3 domain UCH003_RS12480 PF02033 Ribosome-binding factor A UCH003_RS12485 PF11987 Translation-initiation factor 2 UCH003_RS12485 PF04760 Translation initiation factor IF-2, N-terminal region UCH003_RS12485 PF00009 Elongation factor Tu GTP binding domain UCH003_RS12495 PF00288 GHMP kinases N terminal domain UCH003_RS12495 PF08544 GHMP kinases C terminal UCH003_RS12505 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase UCH003_RS12510 PF03775 Septum formation inhibitor MinC, C-terminal domain UCH003_RS12525 PF01312 FlhB HrpN YscU SpaS Family UCH003_RS12530 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain UCH003_RS12530 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain UCH003_RS12535 PF02445 Quinolinate synthetase A protein UCH003_RS12540 PF02660 Glycerol-3-phosphate acyltransferase UCH003_RS12550 PF00486 Transcriptional regulatory protein, C terminal UCH003_RS12550 PF00072 Response regulator receiver domain UCH003_RS12555 PF00512 His Kinase A (phospho-acceptor) domain UCH003_RS12555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UCH003_RS12560 PF00037 4Fe-4S binding domain UCH003_RS12565 PF02541 Ppx/GppA phosphatase family UCH003_RS12570 PF01103 Surface antigen UCH003_RS12570 PF07244 Surface antigen variable number repeat UCH003_RS12575 PF01842 ACT domain UCH003_RS12575 PF02153 Prephenate dehydrogenase UCH003_RS12580 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal UCH003_RS12580 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III UCH003_RS12585 PF02504 Fatty acid synthesis protein UCH003_RS12590 PF01783 Ribosomal L32p protein family UCH003_RS12600 PF00334 Nucleoside diphosphate kinase UCH003_RS12605 PF00037 4Fe-4S binding domain UCH003_RS12615 PF10417 C-terminal domain of 1-Cys peroxiredoxin UCH003_RS12615 PF00578 AhpC/TSA family UCH003_RS12620 PF01475 Ferric uptake regulator family UCH003_RS12625 PF02779 Transketolase, pyrimidine binding domain UCH003_RS12625 PF02780 Transketolase, C-terminal domain UCH003_RS12625 PF13292 1-deoxy-D-xylulose-5-phosphate synthase UCH003_RS12635 PF14841 FliG middle domain UCH003_RS12635 PF01706 FliG C-terminal domain UCH003_RS12635 PF14842 FliG N-terminal domain UCH003_RS12640 PF08345 Flagellar M-ring protein C-terminal UCH003_RS12640 PF01514 Secretory protein of YscJ/FliF family UCH003_RS12645 PF00155 Aminotransferase class I and II UCH003_RS12650 PF00800 Prephenate dehydratase UCH003_RS12650 PF01817 Chorismate mutase type II UCH003_RS12650 PF01842 ACT domain UCH003_RS12655 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain UCH003_RS12655 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain UCH003_RS12665 PF01195 Peptidyl-tRNA hydrolase UCH003_RS12670 PF14693 Ribosomal protein TL5, C-terminal domain UCH003_RS12670 PF01386 Ribosomal L25p family UCH003_RS12675 PF00437 Type II/IV secretion system protein UCH003_RS12680 PF00923 Transaldolase/Fructose-6-phosphate aldolase UCH003_RS12690 PF01814 Hemerythrin HHE cation binding domain UCH003_RS12700 PF01584 CheW-like domain UCH003_RS12705 PF00072 Response regulator receiver domain UCH003_RS12705 PF01584 CheW-like domain UCH003_RS12705 PF02895 Signal transducing histidine kinase, homodimeric domain UCH003_RS12705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UCH003_RS12705 PF01627 Hpt domain UCH003_RS12710 PF01584 CheW-like domain UCH003_RS12710 PF00072 Response regulator receiver domain UCH003_RS12715 PF00149 Calcineurin-like phosphoesterase UCH003_RS12720 PF02774 Semialdehyde dehydrogenase, dimerisation domain UCH003_RS12720 PF01118 Semialdehyde dehydrogenase, NAD binding domain UCH003_RS12725 PF01272 Transcription elongation factor, GreA/GreB, C-term UCH003_RS12725 PF03449 Transcription elongation factor, N-terminal UCH003_RS12730 PF02684 Lipid-A-disaccharide synthetase UCH003_RS12735 PF01975 Survival protein SurE UCH003_RS12740 PF00899 ThiF family UCH003_RS12760 PF02142 MGS-like domain UCH003_RS12760 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain UCH003_RS12760 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain UCH003_RS12775 PF10431 C-terminal, D2-small domain, of ClpB protein UCH003_RS12775 PF06689 ClpX C4-type zinc finger UCH003_RS12775 PF07724 AAA domain (Cdc48 subfamily) UCH003_RS12780 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 UCH003_RS12780 PF00132 Bacterial transferase hexapeptide (six repeats) UCH003_RS12785 PF07977 FabA-like domain UCH003_RS12790 PF02677 Epoxyqueuosine reductase QueH UCH003_RS12800 PF00578 AhpC/TSA family UCH003_RS12805 PF01063 Amino-transferase class IV UCH003_RS12815 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase UCH003_RS12815 PF01502 Phosphoribosyl-AMP cyclohydrolase UCH003_RS12830 PF16199 Radical_SAM C-terminal domain UCH003_RS12830 PF04055 Radical SAM superfamily UCH003_RS12835 PF00156 Phosphoribosyl transferase domain UCH003_RS12840 PF01113 Dihydrodipicolinate reductase, N-terminus UCH003_RS12840 PF05173 Dihydrodipicolinate reductase, C-terminus UCH003_RS12845 PF07992 Pyridine nucleotide-disulphide oxidoreductase UCH003_RS12850 PF00085 Thioredoxin UCH003_RS12855 PF02021 Uncharacterised protein family UPF0102 UCH003_RS12860 PF03447 Homoserine dehydrogenase, NAD binding domain UCH003_RS12860 PF01842 ACT domain UCH003_RS12860 PF00742 Homoserine dehydrogenase UCH003_RS12865 PF00155 Aminotransferase class I and II UCH003_RS12880 PF08032 RNA 2'-O ribose methyltransferase substrate binding UCH003_RS12880 PF00588 SpoU rRNA Methylase family UCH003_RS12885 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases UCH003_RS12890 PF01197 Ribosomal protein L31 UCH003_RS12895 PF04452 RNA methyltransferase UCH003_RS12905 PF03454 MoeA C-terminal region (domain IV) UCH003_RS12905 PF03453 MoeA N-terminal region (domain I and II) UCH003_RS12905 PF00994 Probable molybdopterin binding domain UCH003_RS12910 PF04055 Radical SAM superfamily UCH003_RS12910 PF06463 Molybdenum Cofactor Synthesis C UCH003_RS12915 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UCH003_RS12915 PF08447 PAS fold UCH003_RS12920 PF00672 HAMP domain UCH003_RS12920 PF16591 Helical bimodular sensor domain UCH003_RS12920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UCH003_RS12945 PF00171 Aldehyde dehydrogenase family UCH003_RS12955 PF00361 Proton-conducting membrane transporter UCH003_RS12960 PF00361 Proton-conducting membrane transporter UCH003_RS12965 PF00361 Proton-conducting membrane transporter UCH003_RS12965 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus UCH003_RS12970 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L UCH003_RS12975 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 UCH003_RS12980 PF12838 4Fe-4S dicluster domain UCH003_RS12985 PF00146 NADH dehydrogenase UCH003_RS12990 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region UCH003_RS12990 PF01568 Molydopterin dinucleotide binding domain UCH003_RS12990 PF00384 Molybdopterin oxidoreductase UCH003_RS12990 PF04879 Molybdopterin oxidoreductase Fe4S4 domain UCH003_RS12990 PF13237 4Fe-4S dicluster domain UCH003_RS13005 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit UCH003_RS13010 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit UCH003_RS13015 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit UCH003_RS13020 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 UCH003_RS13025 PF00004 ATPase family associated with various cellular activities (AAA) UCH003_RS13025 PF17862 AAA+ lid domain UCH003_RS13025 PF06480 FtsH Extracellular UCH003_RS13025 PF01434 Peptidase family M41 UCH003_RS13030 PF13193 AMP-binding enzyme C-terminal domain UCH003_RS13030 PF00501 AMP-binding enzyme UCH003_RS13040 PF01261 Xylose isomerase-like TIM barrel UCH003_RS13060 PF00005 ABC transporter UCH003_RS13065 PF00950 ABC 3 transport family UCH003_RS13085 PF00005 ABC transporter UCH003_RS13090 PF00497 Bacterial extracellular solute-binding proteins, family 3 UCH003_RS13095 PF00528 Binding-protein-dependent transport system inner membrane component UCH003_RS13105 PF13426 PAS domain UCH003_RS13105 PF00512 His Kinase A (phospho-acceptor) domain UCH003_RS13105 PF00989 PAS fold UCH003_RS13105 PF13188 PAS domain UCH003_RS13105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UCH003_RS13110 PF00486 Transcriptional regulatory protein, C terminal UCH003_RS13110 PF00072 Response regulator receiver domain UCH003_RS13120 PF00248 Aldo/keto reductase family UCH003_RS13125 PF00909 Ammonium Transporter Family UCH003_RS13130 PF00543 Nitrogen regulatory protein P-II UCH003_RS13135 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD UCH003_RS13140 PF00072 Response regulator receiver domain UCH003_RS13140 PF00486 Transcriptional regulatory protein, C terminal UCH003_RS13145 PF08448 PAS fold UCH003_RS13145 PF08447 PAS fold UCH003_RS13145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UCH003_RS13170 PF00672 HAMP domain UCH003_RS13170 PF16591 Helical bimodular sensor domain UCH003_RS13170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UCH003_RS13175 PF01914 MarC family integral membrane protein UCH003_RS13195 PF01625 Peptide methionine sulfoxide reductase UCH003_RS13200 PF02405 Permease MlaE UCH003_RS13205 PF00005 ABC transporter UCH003_RS13225 PF00072 Response regulator receiver domain UCH003_RS13225 PF00486 Transcriptional regulatory protein, C terminal UCH003_RS13230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UCH003_RS13255 PF01274 Malate synthase UCH003_RS13275 PF04461 Protein of unknown function (DUF520) UCH003_RS13280 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain UCH003_RS13280 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain UCH003_RS13285 PF03738 Glutathionylspermidine synthase preATP-grasp UCH003_RS13300 PF01165 Ribosomal protein S21 UCH003_RS13310 PF13746 4Fe-4S dicluster domain UCH003_RS13310 PF12801 4Fe-4S binding domain UCH003_RS13310 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase UCH003_RS13315 PF03595 Voltage-dependent anion channel UCH003_RS13325 PF00453 Ribosomal protein L20 UCH003_RS13330 PF01632 Ribosomal protein L35 UCH003_RS13335 PF05198 Translation initiation factor IF-3, N-terminal domain UCH003_RS13335 PF00707 Translation initiation factor IF-3, C-terminal domain UCH003_RS13340 PF03129 Anticodon binding domain UCH003_RS13340 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) UCH003_RS13340 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain UCH003_RS13350 PF01252 Signal peptidase (SPase) II UCH003_RS13355 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I UCH003_RS13355 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II UCH003_RS13355 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III UCH003_RS13355 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain UCH003_RS13370 PF01649 Ribosomal protein S20 UCH003_RS13375 PF03462 PCRF domain UCH003_RS13375 PF00472 RF-1 domain UCH003_RS13385 PF01678 Diaminopimelate epimerase UCH003_RS13390 PF01121 Dephospho-CoA kinase UCH003_RS13395 PF00586 AIR synthase related protein, N-terminal domain UCH003_RS13395 PF02769 AIR synthase related protein, C-terminal domain UCH003_RS13405 PF01312 FlhB HrpN YscU SpaS Family UCH003_RS13415 PF00004 ATPase family associated with various cellular activities (AAA) UCH003_RS13415 PF16193 AAA C-terminal domain UCH003_RS13415 PF12002 MgsA AAA+ ATPase C terminal UCH003_RS13420 PF00849 RNA pseudouridylate synthase UCH003_RS13420 PF01479 S4 domain UCH003_RS13425 PF00571 CBS domain UCH003_RS13425 PF01380 SIS domain UCH003_RS13430 PF17770 Ribonuclease J C-terminal domain UCH003_RS13430 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain UCH003_RS13430 PF00753 Metallo-beta-lactamase superfamily UCH003_RS13435 PF00398 Ribosomal RNA adenine dimethylase UCH003_RS13440 PF00977 Histidine biosynthesis protein UCH003_RS13450 PF04055 Radical SAM superfamily UCH003_RS13455 PF01557 Fumarylacetoacetate (FAA) hydrolase family UCH003_RS13460 PF00849 RNA pseudouridylate synthase UCH003_RS13465 PF10397 Adenylosuccinate lyase C-terminus UCH003_RS13465 PF00206 Lyase UCH003_RS13470 PF03477 ATP cone domain UCH003_RS13470 PF00317 Ribonucleotide reductase, all-alpha domain UCH003_RS13470 PF02867 Ribonucleotide reductase, barrel domain UCH003_RS13475 PF01177 Asp/Glu/Hydantoin racemase UCH003_RS13490 PF03840 Preprotein translocase SecG subunit UCH003_RS13500 PF01765 Ribosome recycling factor UCH003_RS13505 PF00156 Phosphoribosyl transferase domain UCH003_RS13530 PF04011 LemA family UCH003_RS13535 PF03144 Elongation factor Tu domain 2 UCH003_RS13535 PF00009 Elongation factor Tu GTP binding domain UCH003_RS13535 PF00679 Elongation factor G C-terminus UCH003_RS13545 PF03963 Flagellar hook capping protein - N-terminal region UCH003_RS13550 PF00460 Flagella basal body rod protein UCH003_RS13550 PF07196 Flagellin hook IN motif UCH003_RS13550 PF06429 Flagellar basal body rod FlgEFG protein C-terminal UCH003_RS13550 PF07559 Flagellar basal body protein FlaE UCH003_RS13555 PF00460 Flagella basal body rod protein UCH003_RS13555 PF07196 Flagellin hook IN motif UCH003_RS13555 PF07559 Flagellar basal body protein FlaE UCH003_RS13555 PF06429 Flagellar basal body rod FlgEFG protein C-terminal UCH003_RS13560 PF02511 Thymidylate synthase complementing protein UCH003_RS13565 PF02075 Crossover junction endodeoxyribonuclease RuvC