locus-tag class description SDEL_RS00010 PF02511 Thymidylate synthase complementing protein SDEL_RS00015 PF02075 Crossover junction endodeoxyribonuclease RuvC SDEL_RS00020 PF00308 Bacterial dnaA protein SDEL_RS00020 PF11638 DnaA N-terminal domain SDEL_RS00020 PF08299 Bacterial dnaA protein helix-turn-helix SDEL_RS00025 PF00712 DNA polymerase III beta subunit, N-terminal domain SDEL_RS00025 PF02767 DNA polymerase III beta subunit, central domain SDEL_RS00025 PF02768 DNA polymerase III beta subunit, C-terminal domain SDEL_RS00030 PF00204 DNA gyrase B SDEL_RS00030 PF00986 DNA gyrase B subunit, carboxyl terminus SDEL_RS00030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SDEL_RS00030 PF01751 Toprim domain SDEL_RS00035 PF00990 Diguanylate cyclase, GGDEF domain SDEL_RS00035 PF00563 EAL domain SDEL_RS00035 PF08448 PAS fold SDEL_RS00035 PF08447 PAS fold SDEL_RS00040 PF14489 QueF-like protein SDEL_RS00050 PF03167 Uracil DNA glycosylase superfamily SDEL_RS00055 PF14815 NUDIX domain SDEL_RS00055 PF00633 Helix-hairpin-helix motif SDEL_RS00055 PF00730 HhH-GPD superfamily base excision DNA repair protein SDEL_RS00060 PF07690 Major Facilitator Superfamily SDEL_RS00085 PF02743 Cache domain SDEL_RS00085 PF00672 HAMP domain SDEL_RS00085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SDEL_RS00095 PF06826 Predicted Permease Membrane Region SDEL_RS00095 PF02080 TrkA-C domain SDEL_RS00105 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SDEL_RS00110 PF00528 Binding-protein-dependent transport system inner membrane component SDEL_RS00115 PF12911 N-terminal TM domain of oligopeptide transport permease C SDEL_RS00115 PF00528 Binding-protein-dependent transport system inner membrane component SDEL_RS00120 PF00005 ABC transporter SDEL_RS00125 PF00005 ABC transporter SDEL_RS00130 PF01554 MatE SDEL_RS00145 PF00266 Aminotransferase class-V SDEL_RS00155 PF03475 3-alpha domain SDEL_RS00155 PF03473 MOSC domain SDEL_RS00165 PF02463 RecF/RecN/SMC N terminal domain SDEL_RS00170 PF01875 Memo-like protein SDEL_RS00185 PF00892 EamA-like transporter family SDEL_RS00200 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SDEL_RS00200 PF00384 Molybdopterin oxidoreductase SDEL_RS00200 PF01568 Molydopterin dinucleotide binding domain SDEL_RS00210 PF05973 Phage derived protein Gp49-like (DUF891) SDEL_RS00235 PF00920 Dehydratase family SDEL_RS00240 PF01914 MarC family integral membrane protein SDEL_RS00250 PF00483 Nucleotidyl transferase SDEL_RS00255 PF06418 CTP synthase N-terminus SDEL_RS00255 PF00117 Glutamine amidotransferase class-I SDEL_RS00260 PF02272 DHHA1 domain SDEL_RS00260 PF01368 DHH family SDEL_RS00260 PF17768 RecJ OB domain SDEL_RS00270 PF00795 Carbon-nitrogen hydrolase SDEL_RS00275 PF00268 Ribonucleotide reductase, small chain SDEL_RS00295 PF01177 Asp/Glu/Hydantoin racemase SDEL_RS00300 PF02867 Ribonucleotide reductase, barrel domain SDEL_RS00300 PF00317 Ribonucleotide reductase, all-alpha domain SDEL_RS00300 PF03477 ATP cone domain SDEL_RS00305 PF10397 Adenylosuccinate lyase C-terminus SDEL_RS00305 PF00206 Lyase SDEL_RS00310 PF01479 S4 domain SDEL_RS00310 PF00849 RNA pseudouridylate synthase SDEL_RS00315 PF01557 Fumarylacetoacetate (FAA) hydrolase family SDEL_RS00320 PF04055 Radical SAM superfamily SDEL_RS00330 PF00977 Histidine biosynthesis protein SDEL_RS00335 PF00398 Ribosomal RNA adenine dimethylase SDEL_RS00340 PF00753 Metallo-beta-lactamase superfamily SDEL_RS00340 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain SDEL_RS00340 PF17770 Ribonuclease J C-terminal domain SDEL_RS00345 PF00571 CBS domain SDEL_RS00345 PF01380 SIS domain SDEL_RS00350 PF00849 RNA pseudouridylate synthase SDEL_RS00350 PF01479 S4 domain SDEL_RS00355 PF01661 Macro domain SDEL_RS00355 PF16193 AAA C-terminal domain SDEL_RS00355 PF12002 MgsA AAA+ ATPase C terminal SDEL_RS00355 PF05496 Holliday junction DNA helicase RuvB P-loop domain SDEL_RS00365 PF01312 FlhB HrpN YscU SpaS Family SDEL_RS00375 PF02769 AIR synthase related protein, C-terminal domain SDEL_RS00375 PF00586 AIR synthase related protein, N-terminal domain SDEL_RS00380 PF01121 Dephospho-CoA kinase SDEL_RS00385 PF01678 Diaminopimelate epimerase SDEL_RS00395 PF00472 RF-1 domain SDEL_RS00395 PF03462 PCRF domain SDEL_RS00400 PF01649 Ribosomal protein S20 SDEL_RS00415 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SDEL_RS00415 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SDEL_RS00415 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SDEL_RS00415 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SDEL_RS00420 PF01252 Signal peptidase (SPase) II SDEL_RS00425 PF00884 Sulfatase SDEL_RS00435 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SDEL_RS00435 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SDEL_RS00435 PF03129 Anticodon binding domain SDEL_RS00440 PF00707 Translation initiation factor IF-3, C-terminal domain SDEL_RS00440 PF05198 Translation initiation factor IF-3, N-terminal domain SDEL_RS00445 PF01632 Ribosomal protein L35 SDEL_RS00450 PF00453 Ribosomal protein L20 SDEL_RS00455 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase SDEL_RS00455 PF12801 4Fe-4S binding domain SDEL_RS00455 PF13746 4Fe-4S dicluster domain SDEL_RS00465 PF01165 Ribosomal protein S21 SDEL_RS00480 PF03738 Glutathionylspermidine synthase preATP-grasp SDEL_RS00485 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SDEL_RS00485 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SDEL_RS00490 PF04461 Protein of unknown function (DUF520) SDEL_RS00500 PF01219 Prokaryotic diacylglycerol kinase SDEL_RS00510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SDEL_RS00515 PF00486 Transcriptional regulatory protein, C terminal SDEL_RS00515 PF00072 Response regulator receiver domain SDEL_RS00535 PF00005 ABC transporter SDEL_RS00540 PF02405 Permease MlaE SDEL_RS00545 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 SDEL_RS00545 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) SDEL_RS00550 PF00543 Nitrogen regulatory protein P-II SDEL_RS00555 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SDEL_RS00560 PF08769 Sporulation initiation factor Spo0A C terminal SDEL_RS00560 PF00072 Response regulator receiver domain SDEL_RS00565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SDEL_RS00565 PF00512 His Kinase A (phospho-acceptor) domain SDEL_RS00590 PF17200 Single Cache domain 2 SDEL_RS00590 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SDEL_RS00590 PF00672 HAMP domain SDEL_RS00595 PF17200 Single Cache domain 2 SDEL_RS00595 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SDEL_RS00595 PF00672 HAMP domain SDEL_RS00600 PF08543 Phosphomethylpyrimidine kinase SDEL_RS00605 PF03653 Uncharacterised protein family (UPF0093) SDEL_RS00615 PF00033 Cytochrome b/b6/petB SDEL_RS00615 PF00032 Cytochrome b(C-terminal)/b6/petD SDEL_RS00620 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal SDEL_RS00620 PF00355 Rieske [2Fe-2S] domain SDEL_RS00625 PF00248 Aldo/keto reductase family SDEL_RS00630 PF00072 Response regulator receiver domain SDEL_RS00630 PF00486 Transcriptional regulatory protein, C terminal SDEL_RS00645 PF00528 Binding-protein-dependent transport system inner membrane component SDEL_RS00650 PF00497 Bacterial extracellular solute-binding proteins, family 3 SDEL_RS00655 PF00005 ABC transporter SDEL_RS00675 PF00950 ABC 3 transport family SDEL_RS00680 PF00005 ABC transporter SDEL_RS00700 PF01261 Xylose isomerase-like TIM barrel SDEL_RS00710 PF00501 AMP-binding enzyme SDEL_RS00710 PF13193 AMP-binding enzyme C-terminal domain SDEL_RS00715 PF17862 AAA+ lid domain SDEL_RS00715 PF01434 Peptidase family M41 SDEL_RS00715 PF06480 FtsH Extracellular SDEL_RS00715 PF00004 ATPase family associated with various cellular activities (AAA) SDEL_RS00720 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 SDEL_RS00725 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit SDEL_RS00730 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit SDEL_RS00735 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit SDEL_RS00750 PF13237 4Fe-4S dicluster domain SDEL_RS00750 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region SDEL_RS00750 PF01568 Molydopterin dinucleotide binding domain SDEL_RS00750 PF00384 Molybdopterin oxidoreductase SDEL_RS00750 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SDEL_RS00755 PF00146 NADH dehydrogenase SDEL_RS00760 PF12838 4Fe-4S dicluster domain SDEL_RS00765 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 SDEL_RS00770 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L SDEL_RS00775 PF00361 Proton-conducting membrane transporter SDEL_RS00775 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus SDEL_RS00780 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus SDEL_RS00780 PF00361 Proton-conducting membrane transporter SDEL_RS00785 PF00361 Proton-conducting membrane transporter SDEL_RS00815 PF00672 HAMP domain SDEL_RS00815 PF16591 Helical bimodular sensor domain SDEL_RS00815 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SDEL_RS00825 PF04055 Radical SAM superfamily SDEL_RS00825 PF06463 Molybdenum Cofactor Synthesis C SDEL_RS00830 PF00994 Probable molybdopterin binding domain SDEL_RS00830 PF03453 MoeA N-terminal region (domain I and II) SDEL_RS00830 PF03454 MoeA C-terminal region (domain IV) SDEL_RS00840 PF04452 RNA methyltransferase SDEL_RS00845 PF01197 Ribosomal protein L31 SDEL_RS00850 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SDEL_RS00855 PF00588 SpoU rRNA Methylase family SDEL_RS00855 PF08032 RNA 2'-O ribose methyltransferase substrate binding SDEL_RS00870 PF00155 Aminotransferase class I and II SDEL_RS00875 PF03447 Homoserine dehydrogenase, NAD binding domain SDEL_RS00875 PF00742 Homoserine dehydrogenase SDEL_RS00875 PF01842 ACT domain SDEL_RS00880 PF02021 Uncharacterised protein family UPF0102 SDEL_RS00885 PF00085 Thioredoxin SDEL_RS00890 PF07992 Pyridine nucleotide-disulphide oxidoreductase SDEL_RS00895 PF05173 Dihydrodipicolinate reductase, C-terminus SDEL_RS00895 PF01113 Dihydrodipicolinate reductase, N-terminus SDEL_RS00900 PF00156 Phosphoribosyl transferase domain SDEL_RS00905 PF16199 Radical_SAM C-terminal domain SDEL_RS00905 PF04055 Radical SAM superfamily SDEL_RS00920 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase SDEL_RS00920 PF01502 Phosphoribosyl-AMP cyclohydrolase SDEL_RS00930 PF01063 Amino-transferase class IV SDEL_RS00935 PF00578 AhpC/TSA family SDEL_RS00945 PF02677 Epoxyqueuosine reductase QueH SDEL_RS00950 PF07977 FabA-like domain SDEL_RS00955 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 SDEL_RS00955 PF00132 Bacterial transferase hexapeptide (six repeats) SDEL_RS00960 PF10431 C-terminal, D2-small domain, of ClpB protein SDEL_RS00960 PF07724 AAA domain (Cdc48 subfamily) SDEL_RS00960 PF06689 ClpX C4-type zinc finger SDEL_RS00975 PF02142 MGS-like domain SDEL_RS00975 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain SDEL_RS00975 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SDEL_RS01005 PF01883 Iron-sulfur cluster assembly protein SDEL_RS01005 PF10609 NUBPL iron-transfer P-loop NTPase SDEL_RS01015 PF02001 Protein of unknown function DUF134 SDEL_RS01020 PF00899 ThiF family SDEL_RS01025 PF01975 Survival protein SurE SDEL_RS01030 PF02684 Lipid-A-disaccharide synthetase SDEL_RS01035 PF01272 Transcription elongation factor, GreA/GreB, C-term SDEL_RS01035 PF03449 Transcription elongation factor, N-terminal SDEL_RS01040 PF02774 Semialdehyde dehydrogenase, dimerisation domain SDEL_RS01040 PF01118 Semialdehyde dehydrogenase, NAD binding domain SDEL_RS01045 PF12850 Calcineurin-like phosphoesterase superfamily domain SDEL_RS01050 PF01584 CheW-like domain SDEL_RS01050 PF00072 Response regulator receiver domain SDEL_RS01055 PF00072 Response regulator receiver domain SDEL_RS01055 PF02895 Signal transducing histidine kinase, homodimeric domain SDEL_RS01055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SDEL_RS01055 PF01627 Hpt domain SDEL_RS01055 PF01584 CheW-like domain SDEL_RS01060 PF01584 CheW-like domain SDEL_RS01075 PF00923 Transaldolase/Fructose-6-phosphate aldolase SDEL_RS01080 PF00437 Type II/IV secretion system protein SDEL_RS01085 PF01386 Ribosomal L25p family SDEL_RS01085 PF14693 Ribosomal protein TL5, C-terminal domain SDEL_RS01090 PF01195 Peptidyl-tRNA hydrolase SDEL_RS01100 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain SDEL_RS01100 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain SDEL_RS01110 PF01842 ACT domain SDEL_RS01110 PF01817 Chorismate mutase type II SDEL_RS01110 PF00800 Prephenate dehydratase SDEL_RS01115 PF00155 Aminotransferase class I and II SDEL_RS01120 PF08345 Flagellar M-ring protein C-terminal SDEL_RS01120 PF01514 Secretory protein of YscJ/FliF family SDEL_RS01125 PF14842 FliG N-terminal domain SDEL_RS01125 PF14841 FliG middle domain SDEL_RS01125 PF01706 FliG C-terminal domain SDEL_RS01135 PF02779 Transketolase, pyrimidine binding domain SDEL_RS01135 PF02780 Transketolase, C-terminal domain SDEL_RS01135 PF13292 1-deoxy-D-xylulose-5-phosphate synthase SDEL_RS01145 PF00578 AhpC/TSA family SDEL_RS01145 PF10417 C-terminal domain of 1-Cys peroxiredoxin SDEL_RS01150 PF00037 4Fe-4S binding domain SDEL_RS01155 PF00334 Nucleoside diphosphate kinase SDEL_RS01165 PF01783 Ribosomal L32p protein family SDEL_RS01170 PF02504 Fatty acid synthesis protein SDEL_RS01175 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal SDEL_RS01175 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III SDEL_RS01180 PF02153 Prephenate dehydrogenase SDEL_RS01185 PF01103 Surface antigen SDEL_RS01185 PF07244 Surface antigen variable number repeat SDEL_RS01195 PF00037 4Fe-4S binding domain SDEL_RS01200 PF00512 His Kinase A (phospho-acceptor) domain SDEL_RS01200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SDEL_RS01205 PF00072 Response regulator receiver domain SDEL_RS01205 PF00486 Transcriptional regulatory protein, C terminal SDEL_RS01215 PF02660 Glycerol-3-phosphate acyltransferase SDEL_RS01220 PF02445 Quinolinate synthetase A protein SDEL_RS01225 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain SDEL_RS01225 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain SDEL_RS01230 PF01312 FlhB HrpN YscU SpaS Family SDEL_RS01240 PF01551 Peptidase family M23 SDEL_RS01240 PF01476 LysM domain SDEL_RS01245 PF03775 Septum formation inhibitor MinC, C-terminal domain SDEL_RS01250 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase SDEL_RS01260 PF08544 GHMP kinases C terminal SDEL_RS01260 PF00288 GHMP kinases N terminal domain SDEL_RS01270 PF00009 Elongation factor Tu GTP binding domain SDEL_RS01270 PF11987 Translation-initiation factor 2 SDEL_RS01270 PF04760 Translation initiation factor IF-2, N-terminal region SDEL_RS01275 PF02033 Ribosome-binding factor A SDEL_RS01280 PF02576 RimP N-terminal domain SDEL_RS01280 PF17384 RimP C-terminal SH3 domain SDEL_RS01285 PF01872 RibD C-terminal domain SDEL_RS01285 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SDEL_RS01305 PF00313 'Cold-shock' DNA-binding domain SDEL_RS01310 PF13426 PAS domain SDEL_RS01310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SDEL_RS01310 PF00512 His Kinase A (phospho-acceptor) domain SDEL_RS01310 PF00672 HAMP domain SDEL_RS01315 PF00072 Response regulator receiver domain SDEL_RS01315 PF00486 Transcriptional regulatory protein, C terminal SDEL_RS01325 PF13442 Cytochrome C oxidase, cbb3-type, subunit III SDEL_RS01335 PF04055 Radical SAM superfamily SDEL_RS01335 PF16199 Radical_SAM C-terminal domain SDEL_RS01340 PF00672 HAMP domain SDEL_RS01340 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SDEL_RS01340 PF16591 Helical bimodular sensor domain SDEL_RS01345 PF01075 Glycosyltransferase family 9 (heptosyltransferase) SDEL_RS01350 PF00132 Bacterial transferase hexapeptide (six repeats) SDEL_RS01350 PF12464 Maltose acetyltransferase SDEL_RS01355 PF10518 TAT (twin-arginine translocation) pathway signal sequence SDEL_RS01355 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SDEL_RS01355 PF01568 Molydopterin dinucleotide binding domain SDEL_RS01355 PF00384 Molybdopterin oxidoreductase SDEL_RS01360 PF13247 4Fe-4S dicluster domain SDEL_RS01365 PF03916 Polysulphide reductase, NrfD SDEL_RS01370 PF00990 Diguanylate cyclase, GGDEF domain SDEL_RS01370 PF08448 PAS fold SDEL_RS01370 PF00563 EAL domain SDEL_RS01375 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SDEL_RS01375 PF00384 Molybdopterin oxidoreductase SDEL_RS01375 PF01568 Molydopterin dinucleotide binding domain SDEL_RS01380 PF13247 4Fe-4S dicluster domain SDEL_RS01385 PF03916 Polysulphide reductase, NrfD SDEL_RS01390 PF00072 Response regulator receiver domain SDEL_RS01390 PF00486 Transcriptional regulatory protein, C terminal SDEL_RS01395 PF00672 HAMP domain SDEL_RS01395 PF13426 PAS domain SDEL_RS01395 PF00512 His Kinase A (phospho-acceptor) domain SDEL_RS01395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SDEL_RS01405 PF04055 Radical SAM superfamily SDEL_RS01405 PF06969 HemN C-terminal domain SDEL_RS01410 PF12823 Domain of unknown function (DUF3817) SDEL_RS01420 PF02833 DHHA2 domain SDEL_RS01420 PF01368 DHH family SDEL_RS01430 PF01209 ubiE/COQ5 methyltransferase family SDEL_RS01435 PF02601 Exonuclease VII, large subunit SDEL_RS01435 PF13742 OB-fold nucleic acid binding domain SDEL_RS01440 PF00962 Adenosine/AMP deaminase SDEL_RS01445 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase SDEL_RS01450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SDEL_RS01450 PF03466 LysR substrate binding domain SDEL_RS01455 PF03601 Conserved hypothetical protein 698 SDEL_RS01465 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) SDEL_RS01465 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 SDEL_RS01470 PF01343 Peptidase family S49 SDEL_RS01475 PF01979 Amidohydrolase family SDEL_RS01480 PF01220 Dehydroquinase class II SDEL_RS01485 PF00557 Metallopeptidase family M24 SDEL_RS01485 PF01321 Creatinase/Prolidase N-terminal domain SDEL_RS01490 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) SDEL_RS01495 PF00448 SRP54-type protein, GTPase domain SDEL_RS01500 PF10609 NUBPL iron-transfer P-loop NTPase SDEL_RS01510 PF04539 Sigma-70 region 3 SDEL_RS01510 PF04542 Sigma-70 region 2 SDEL_RS01510 PF04545 Sigma-70, region 4 SDEL_RS01515 PF02154 Flagellar motor switch protein FliM SDEL_RS01515 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term SDEL_RS01520 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term SDEL_RS01520 PF04509 CheC-like family SDEL_RS01525 PF03641 Possible lysine decarboxylase SDEL_RS01535 PF00535 Glycosyl transferase family 2 SDEL_RS01540 PF08889 WbqC-like protein family SDEL_RS01545 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family SDEL_RS01565 PF14572 Phosphoribosyl synthetase-associated domain SDEL_RS01565 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase SDEL_RS01570 PF00679 Elongation factor G C-terminus SDEL_RS01570 PF03144 Elongation factor Tu domain 2 SDEL_RS01570 PF00009 Elongation factor Tu GTP binding domain SDEL_RS01570 PF06421 GTP-binding protein LepA C-terminus SDEL_RS01575 PF00156 Phosphoribosyl transferase domain SDEL_RS01585 PF00083 Sugar (and other) transporter SDEL_RS01590 PF00171 Aldehyde dehydrogenase family SDEL_RS01605 PF16868 NMT1-like family SDEL_RS01615 PF04055 Radical SAM superfamily SDEL_RS01620 PF01208 Uroporphyrinogen decarboxylase (URO-D) SDEL_RS01630 PF01118 Semialdehyde dehydrogenase, NAD binding domain SDEL_RS01630 PF02774 Semialdehyde dehydrogenase, dimerisation domain SDEL_RS01635 PF00158 Sigma-54 interaction domain SDEL_RS01635 PF00072 Response regulator receiver domain SDEL_RS01650 PF00521 DNA gyrase/topoisomerase IV, subunit A SDEL_RS01650 PF03989 DNA gyrase C-terminal domain, beta-propeller SDEL_RS01660 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain SDEL_RS01660 PF00056 lactate/malate dehydrogenase, NAD binding domain SDEL_RS01665 PF01979 Amidohydrolase family SDEL_RS01670 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SDEL_RS01670 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SDEL_RS01685 PF08495 FIST N domain SDEL_RS01685 PF10442 FIST C domain SDEL_RS01685 PF00990 Diguanylate cyclase, GGDEF domain SDEL_RS01685 PF00563 EAL domain SDEL_RS01710 PF00085 Thioredoxin SDEL_RS01720 PF07286 Protein of unknown function (DUF1445) SDEL_RS01740 PF09905 DNA-binding protein VF530 SDEL_RS01745 PF00106 short chain dehydrogenase SDEL_RS01755 PF03883 Peroxide stress protein YaaA SDEL_RS01780 PF03144 Elongation factor Tu domain 2 SDEL_RS01780 PF00009 Elongation factor Tu GTP binding domain SDEL_RS01780 PF03143 Elongation factor Tu C-terminal domain SDEL_RS01785 PF00471 Ribosomal protein L33 SDEL_RS01800 PF02357 Transcription termination factor nusG SDEL_RS01805 PF03946 Ribosomal protein L11, N-terminal domain SDEL_RS01805 PF00298 Ribosomal protein L11, RNA binding domain SDEL_RS01810 PF00687 Ribosomal protein L1p/L10e family SDEL_RS01815 PF00466 Ribosomal protein L10 SDEL_RS01820 PF16320 Ribosomal protein L7/L12 dimerisation domain SDEL_RS01820 PF00542 Ribosomal protein L7/L12 C-terminal domain SDEL_RS01825 PF04565 RNA polymerase Rpb2, domain 3 SDEL_RS01825 PF00562 RNA polymerase Rpb2, domain 6 SDEL_RS01825 PF10385 RNA polymerase beta subunit external 1 domain SDEL_RS01825 PF04561 RNA polymerase Rpb2, domain 2 SDEL_RS01825 PF04563 RNA polymerase beta subunit SDEL_RS01825 PF04560 RNA polymerase Rpb2, domain 7 SDEL_RS01830 PF04997 RNA polymerase Rpb1, domain 1 SDEL_RS01830 PF04983 RNA polymerase Rpb1, domain 3 SDEL_RS01830 PF05000 RNA polymerase Rpb1, domain 4 SDEL_RS01830 PF04998 RNA polymerase Rpb1, domain 5 SDEL_RS01830 PF00623 RNA polymerase Rpb1, domain 2 SDEL_RS01835 PF00164 Ribosomal protein S12/S23 SDEL_RS01840 PF00177 Ribosomal protein S7p/S5e SDEL_RS01845 PF14492 Elongation Factor G, domain II SDEL_RS01845 PF03764 Elongation factor G, domain IV SDEL_RS01845 PF03144 Elongation factor Tu domain 2 SDEL_RS01845 PF00679 Elongation factor G C-terminus SDEL_RS01845 PF00009 Elongation factor Tu GTP binding domain SDEL_RS01850 PF00005 ABC transporter SDEL_RS01850 PF09383 NIL domain SDEL_RS01855 PF00528 Binding-protein-dependent transport system inner membrane component SDEL_RS01860 PF03180 NLPA lipoprotein SDEL_RS01870 PF00384 Molybdopterin oxidoreductase SDEL_RS01870 PF18364 Molybdopterin oxidoreductase N-terminal domain SDEL_RS01870 PF01568 Molydopterin dinucleotide binding domain SDEL_RS01880 PF00072 Response regulator receiver domain SDEL_RS01880 PF00486 Transcriptional regulatory protein, C terminal SDEL_RS01885 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SDEL_RS01890 PF08448 PAS fold SDEL_RS01890 PF08447 PAS fold SDEL_RS01890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SDEL_RS01900 PF16591 Helical bimodular sensor domain SDEL_RS01900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SDEL_RS01900 PF00672 HAMP domain SDEL_RS01905 PF08447 PAS fold SDEL_RS01905 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SDEL_RS01925 PF01168 Alanine racemase, N-terminal domain SDEL_RS01925 PF00842 Alanine racemase, C-terminal domain SDEL_RS01945 PF02527 rRNA small subunit methyltransferase G SDEL_RS01950 PF00672 HAMP domain SDEL_RS01950 PF12729 Four helix bundle sensory module for signal transduction SDEL_RS01950 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SDEL_RS01955 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain SDEL_RS01955 PF02777 Iron/manganese superoxide dismutases, C-terminal domain SDEL_RS01960 PF01741 Large-conductance mechanosensitive channel, MscL SDEL_RS01965 PF00925 GTP cyclohydrolase II SDEL_RS01970 PF00490 Delta-aminolevulinic acid dehydratase SDEL_RS01975 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SDEL_RS01975 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SDEL_RS01980 PF10788 Protein of unknown function (DUF2603) SDEL_RS01985 PF06969 HemN C-terminal domain SDEL_RS01985 PF04055 Radical SAM superfamily SDEL_RS01990 PF02754 Cysteine-rich domain SDEL_RS02005 PF07690 Major Facilitator Superfamily SDEL_RS02010 PF02810 SEC-C motif SDEL_RS02015 PF00027 Cyclic nucleotide-binding domain SDEL_RS02015 PF13545 Crp-like helix-turn-helix domain SDEL_RS02030 PF01790 Prolipoprotein diacylglyceryl transferase SDEL_RS02035 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit SDEL_RS02040 PF02910 Fumarate reductase flavoprotein C-term SDEL_RS02040 PF00890 FAD binding domain SDEL_RS02045 PF13183 4Fe-4S dicluster domain SDEL_RS02045 PF13085 2Fe-2S iron-sulfur cluster binding domain SDEL_RS02050 PF00350 Dynamin family SDEL_RS02055 PF00350 Dynamin family SDEL_RS02060 PF01594 AI-2E family transporter SDEL_RS02065 PF05491 RuvB C-terminal winged helix domain SDEL_RS02065 PF05496 Holliday junction DNA helicase RuvB P-loop domain SDEL_RS02065 PF17864 RuvB AAA lid domain SDEL_RS02070 PF02548 Ketopantoate hydroxymethyltransferase SDEL_RS02080 PF00290 Tryptophan synthase alpha chain SDEL_RS02090 PF04333 MlaA lipoprotein SDEL_RS02095 PF00318 Ribosomal protein S2 SDEL_RS02100 PF00889 Elongation factor TS SDEL_RS02105 PF00005 ABC transporter SDEL_RS02110 PF01311 Bacterial export proteins, family 1 SDEL_RS02120 PF00625 Guanylate kinase SDEL_RS02125 PF02416 mttA/Hcf106 family SDEL_RS02130 PF05746 DALR anticodon binding domain SDEL_RS02130 PF03485 Arginyl tRNA synthetase N terminal domain SDEL_RS02130 PF00750 tRNA synthetases class I (R) SDEL_RS02140 PF00990 Diguanylate cyclase, GGDEF domain SDEL_RS02140 PF00072 Response regulator receiver domain SDEL_RS02160 PF00034 Cytochrome c SDEL_RS02160 PF03150 Di-haem cytochrome c peroxidase SDEL_RS02165 PF01467 Cytidylyltransferase-like SDEL_RS02170 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SDEL_RS02170 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain SDEL_RS02175 PF00162 Phosphoglycerate kinase SDEL_RS02180 PF00121 Triosephosphate isomerase SDEL_RS02190 PF00528 Binding-protein-dependent transport system inner membrane component SDEL_RS02195 PF08529 NusA N-terminal domain SDEL_RS02195 PF13184 NusA-like KH domain SDEL_RS02205 PF04055 Radical SAM superfamily SDEL_RS02205 PF01938 TRAM domain SDEL_RS02205 PF00919 Uncharacterized protein family UPF0004 SDEL_RS02230 PF01171 PP-loop family SDEL_RS02235 PF04055 Radical SAM superfamily SDEL_RS02235 PF00919 Uncharacterized protein family UPF0004 SDEL_RS02240 PF02569 Pantoate-beta-alanine ligase SDEL_RS02245 PF00472 RF-1 domain SDEL_RS02245 PF03462 PCRF domain SDEL_RS02270 PF12169 DNA polymerase III subunits gamma and tau domain III SDEL_RS02270 PF12170 DNA polymerase III tau subunit V interacting with alpha SDEL_RS02270 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding SDEL_RS02275 PF07497 Rho termination factor, RNA-binding domain SDEL_RS02275 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SDEL_RS02275 PF07498 Rho termination factor, N-terminal domain SDEL_RS02280 PF01255 Putative undecaprenyl diphosphate synthase SDEL_RS02285 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component SDEL_RS02290 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component SDEL_RS02295 PF03480 Bacterial extracellular solute-binding protein, family 7 SDEL_RS02300 PF00486 Transcriptional regulatory protein, C terminal SDEL_RS02300 PF00072 Response regulator receiver domain SDEL_RS02305 PF08447 PAS fold SDEL_RS02305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SDEL_RS02305 PF08448 PAS fold SDEL_RS02315 PF13356 Arm DNA-binding domain SDEL_RS02315 PF00589 Phage integrase family SDEL_RS02355 PF02661 Fic/DOC family SDEL_RS02355 PF13784 Fic/DOC family N-terminal SDEL_RS02370 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding SDEL_RS02370 PF18381 YcaO cyclodehydratase C-terminal domain SDEL_RS02375 PF02447 GntP family permease SDEL_RS02380 PF00270 DEAD/DEAH box helicase SDEL_RS02380 PF00271 Helicase conserved C-terminal domain SDEL_RS02390 PF12792 CSS motif domain associated with EAL SDEL_RS02390 PF00563 EAL domain SDEL_RS02395 PF03063 Prismane/CO dehydrogenase family SDEL_RS02435 PF02653 Branched-chain amino acid transport system / permease component SDEL_RS02440 PF02653 Branched-chain amino acid transport system / permease component SDEL_RS02440 PF11862 Domain of unknown function (DUF3382) SDEL_RS02445 PF12399 Branched-chain amino acid ATP-binding cassette transporter SDEL_RS02445 PF00005 ABC transporter SDEL_RS02450 PF00005 ABC transporter SDEL_RS02455 PF05140 ResB-like family SDEL_RS02455 PF01578 Cytochrome C assembly protein SDEL_RS02495 PF18146 Damage-inducible protein CinA KH domain SDEL_RS02495 PF02464 Competence-damaged protein SDEL_RS02495 PF00994 Probable molybdopterin binding domain SDEL_RS02500 PF00133 tRNA synthetases class I (I, L, M and V) SDEL_RS02500 PF08264 Anticodon-binding domain of tRNA SDEL_RS02505 PF01425 Amidase SDEL_RS02510 PF00571 CBS domain SDEL_RS02510 PF00478 IMP dehydrogenase / GMP reductase domain SDEL_RS02515 PF00561 alpha/beta hydrolase fold SDEL_RS02520 PF02609 Exonuclease VII small subunit SDEL_RS02530 PF00899 ThiF family SDEL_RS02535 PF00155 Aminotransferase class I and II SDEL_RS02540 PF01225 Mur ligase family, catalytic domain SDEL_RS02540 PF02875 Mur ligase family, glutamate ligase domain SDEL_RS02540 PF08245 Mur ligase middle domain SDEL_RS02550 PF00488 MutS domain V SDEL_RS02550 PF01713 Smr domain SDEL_RS02555 PF07687 Peptidase dimerisation domain SDEL_RS02555 PF01546 Peptidase family M20/M25/M40 SDEL_RS02560 PF01042 Endoribonuclease L-PSP SDEL_RS02565 PF06039 Malate:quinone oxidoreductase (Mqo) SDEL_RS02585 PF00391 PEP-utilising enzyme, mobile domain SDEL_RS02585 PF00224 Pyruvate kinase, barrel domain SDEL_RS02585 PF02887 Pyruvate kinase, alpha/beta domain SDEL_RS02590 PF00829 Ribosomal prokaryotic L21 protein SDEL_RS02595 PF01016 Ribosomal L27 protein SDEL_RS02600 PF01018 GTP1/OBG SDEL_RS02600 PF01926 50S ribosome-binding GTPase SDEL_RS02605 PF00696 Amino acid kinase family SDEL_RS02610 PF00551 Formyl transferase SDEL_RS02610 PF02911 Formyl transferase, C-terminal domain SDEL_RS02620 PF13614 AAA domain SDEL_RS02625 PF17762 HTH domain found in ParB protein SDEL_RS02625 PF02195 ParB-like nuclease domain SDEL_RS02635 PF00430 ATP synthase B/B' CF(0) SDEL_RS02640 PF00213 ATP synthase delta (OSCP) subunit SDEL_RS02645 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SDEL_RS02645 PF00306 ATP synthase alpha/beta chain, C terminal domain SDEL_RS02645 PF02874 ATP synthase alpha/beta family, beta-barrel domain SDEL_RS02650 PF00231 ATP synthase SDEL_RS02655 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SDEL_RS02655 PF02874 ATP synthase alpha/beta family, beta-barrel domain SDEL_RS02660 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain SDEL_RS02665 PF01618 MotA/TolQ/ExbB proton channel family SDEL_RS02670 PF02472 Biopolymer transport protein ExbD/TolR SDEL_RS02680 PF04052 TolB amino-terminal domain SDEL_RS02685 PF01389 OmpA-like transmembrane domain SDEL_RS02685 PF00691 OmpA family SDEL_RS02695 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SDEL_RS02700 PF06505 Activator of aromatic catabolism SDEL_RS02700 PF00158 Sigma-54 interaction domain SDEL_RS02700 PF02830 V4R domain SDEL_RS02700 PF02954 Bacterial regulatory protein, Fis family SDEL_RS02705 PF00698 Acyl transferase domain SDEL_RS02710 PF01048 Phosphorylase superfamily SDEL_RS02715 PF01171 PP-loop family SDEL_RS02725 PF01645 Conserved region in glutamate synthase SDEL_RS02725 PF01493 GXGXG motif SDEL_RS02725 PF04898 Glutamate synthase central domain SDEL_RS02725 PF00310 Glutamine amidotransferases class-II SDEL_RS02730 PF07992 Pyridine nucleotide-disulphide oxidoreductase SDEL_RS02730 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster SDEL_RS02740 PF01039 Carboxyl transferase domain SDEL_RS02740 PF17848 Acetyl-coA carboxylase zinc finger domain SDEL_RS02745 PF02590 Predicted SPOUT methyltransferase SDEL_RS02750 PF01258 Prokaryotic dksA/traR C4-type zinc finger SDEL_RS02760 PF01207 Dihydrouridine synthase (Dus) SDEL_RS02780 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term SDEL_RS02780 PF04509 CheC-like family SDEL_RS02785 PF03372 Endonuclease/Exonuclease/phosphatase family SDEL_RS02800 PF01047 MarR family SDEL_RS02830 PF01964 Radical SAM ThiC family SDEL_RS02830 PF13667 ThiC-associated domain SDEL_RS02840 PF00324 Amino acid permease SDEL_RS02845 PF01925 Sulfite exporter TauE/SafE SDEL_RS02850 PF17755 UvrA DNA-binding domain SDEL_RS02850 PF17760 UvrA interaction domain SDEL_RS02850 PF00005 ABC transporter SDEL_RS02855 PF00375 Sodium:dicarboxylate symporter family SDEL_RS02860 PF00375 Sodium:dicarboxylate symporter family SDEL_RS02870 PF00476 DNA polymerase family A SDEL_RS02870 PF01367 5'-3' exonuclease, C-terminal SAM fold SDEL_RS02870 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain SDEL_RS02875 PF02659 Putative manganese efflux pump SDEL_RS02890 PF00684 DnaJ central domain SDEL_RS02890 PF01556 DnaJ C terminal domain SDEL_RS02890 PF00226 DnaJ domain SDEL_RS02900 PF00486 Transcriptional regulatory protein, C terminal SDEL_RS02900 PF00072 Response regulator receiver domain SDEL_RS02910 PF13662 Toprim domain SDEL_RS02910 PF02132 RecR protein SDEL_RS02915 PF00465 Iron-containing alcohol dehydrogenase SDEL_RS02920 PF00563 EAL domain SDEL_RS02920 PF00990 Diguanylate cyclase, GGDEF domain SDEL_RS02920 PF03707 Bacterial signalling protein N terminal repeat SDEL_RS02930 PF13193 AMP-binding enzyme C-terminal domain SDEL_RS02930 PF00501 AMP-binding enzyme SDEL_RS02935 PF08501 Shikimate dehydrogenase substrate binding domain SDEL_RS02940 PF00425 chorismate binding enzyme SDEL_RS02940 PF04715 Anthranilate synthase component I, N terminal region SDEL_RS02955 PF00464 Serine hydroxymethyltransferase SDEL_RS02960 PF01336 OB-fold nucleic acid binding domain SDEL_RS02960 PF00152 tRNA synthetases class II (D, K and N) SDEL_RS02965 PF01475 Ferric uptake regulator family SDEL_RS02975 PF00990 Diguanylate cyclase, GGDEF domain SDEL_RS02980 PF00437 Type II/IV secretion system protein SDEL_RS02985 PF02686 Glu-tRNAGln amidotransferase C subunit SDEL_RS02995 PF15437 Plasminogen-binding protein pgbA C-terminal SDEL_RS03005 PF03309 Type III pantothenate kinase SDEL_RS03010 PF01634 ATP phosphoribosyltransferase SDEL_RS03015 PF00072 Response regulator receiver domain SDEL_RS03020 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) SDEL_RS03020 PF00072 Response regulator receiver domain SDEL_RS03020 PF00512 His Kinase A (phospho-acceptor) domain SDEL_RS03020 PF01627 Hpt domain SDEL_RS03020 PF00672 HAMP domain SDEL_RS03020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SDEL_RS03035 PF02151 UvrB/uvrC motif SDEL_RS03035 PF08459 UvrC Helix-hairpin-helix N-terminal SDEL_RS03035 PF01541 GIY-YIG catalytic domain SDEL_RS03045 PF00890 FAD binding domain SDEL_RS03050 PF03600 Citrate transporter SDEL_RS03055 PF02540 NAD synthase SDEL_RS03055 PF00117 Glutamine amidotransferase class-I SDEL_RS03055 PF00958 GMP synthase C terminal domain SDEL_RS03065 PF02843 Phosphoribosylglycinamide synthetase, C domain SDEL_RS03065 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain SDEL_RS03065 PF02844 Phosphoribosylglycinamide synthetase, N domain SDEL_RS03075 PF04453 LPS transport system D SDEL_RS03075 PF03968 OstA-like protein SDEL_RS03080 PF00575 S1 RNA binding domain SDEL_RS03080 PF03725 3' exoribonuclease family, domain 2 SDEL_RS03080 PF00013 KH domain SDEL_RS03080 PF01138 3' exoribonuclease family, domain 1 SDEL_RS03080 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain SDEL_RS03085 PF00137 ATP synthase subunit C SDEL_RS03105 PF00364 Biotin-requiring enzyme SDEL_RS03110 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit SDEL_RS03115 PF01293 Phosphoenolpyruvate carboxykinase SDEL_RS03120 PF14698 Argininosuccinate lyase C-terminal SDEL_RS03120 PF00206 Lyase SDEL_RS03125 PF01230 HIT domain SDEL_RS03130 PF01409 tRNA synthetases class II core domain (F) SDEL_RS03130 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain SDEL_RS03135 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain SDEL_RS03135 PF03147 Ferredoxin-fold anticodon binding domain SDEL_RS03135 PF03484 tRNA synthetase B5 domain SDEL_RS03135 PF01588 Putative tRNA binding domain SDEL_RS03140 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SDEL_RS03145 PF02401 LytB protein SDEL_RS03150 PF00575 S1 RNA binding domain SDEL_RS03160 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SDEL_RS03160 PF01842 ACT domain SDEL_RS03160 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SDEL_RS03175 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SDEL_RS03180 PF00873 AcrB/AcrD/AcrF family SDEL_RS03185 PF00873 AcrB/AcrD/AcrF family SDEL_RS03195 PF09285 Elongation factor P, C-terminal SDEL_RS03195 PF08207 Elongation factor P (EF-P) KOW-like domain SDEL_RS03195 PF01132 Elongation factor P (EF-P) OB domain SDEL_RS03205 PF05190 MutS family domain IV SDEL_RS03205 PF01624 MutS domain I SDEL_RS03205 PF05192 MutS domain III SDEL_RS03205 PF00488 MutS domain V SDEL_RS03205 PF05188 MutS domain II SDEL_RS03225 PF03653 Uncharacterised protein family (UPF0093) SDEL_RS03240 PF00672 HAMP domain SDEL_RS03240 PF02743 Cache domain SDEL_RS03240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SDEL_RS03245 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SDEL_RS03245 PF14579 Helix-hairpin-helix motif SDEL_RS03245 PF02811 PHP domain SDEL_RS03245 PF07733 Bacterial DNA polymerase III alpha NTPase domain SDEL_RS03250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SDEL_RS03250 PF00512 His Kinase A (phospho-acceptor) domain SDEL_RS03260 PF02386 Cation transport protein SDEL_RS03265 PF02080 TrkA-C domain SDEL_RS03265 PF02254 TrkA-N domain SDEL_RS03280 PF01098 Cell cycle protein SDEL_RS03285 PF00849 RNA pseudouridylate synthase SDEL_RS03285 PF01479 S4 domain SDEL_RS03290 PF02903 Alpha amylase, N-terminal ig-like domain SDEL_RS03290 PF00128 Alpha amylase, catalytic domain SDEL_RS03295 PF02390 Putative methyltransferase SDEL_RS03300 PF00005 ABC transporter SDEL_RS03315 PF00696 Amino acid kinase family SDEL_RS03320 PF01192 RNA polymerase Rpb6 SDEL_RS03325 PF02824 TGS domain SDEL_RS03325 PF04607 Region found in RelA / SpoT proteins SDEL_RS03325 PF13291 ACT domain SDEL_RS03330 PF00579 tRNA synthetases class I (W and Y) SDEL_RS03335 PF03060 Nitronate monooxygenase SDEL_RS03340 PF01520 N-acetylmuramoyl-L-alanine amidase SDEL_RS03355 PF00152 tRNA synthetases class II (D, K and N) SDEL_RS03355 PF01336 OB-fold nucleic acid binding domain SDEL_RS03355 PF02938 GAD domain SDEL_RS03365 PF00990 Diguanylate cyclase, GGDEF domain SDEL_RS03365 PF00072 Response regulator receiver domain SDEL_RS03375 PF01513 ATP-NAD kinase SDEL_RS03380 PF13476 AAA domain SDEL_RS03385 PF05230 MASE2 domain SDEL_RS03385 PF00990 Diguanylate cyclase, GGDEF domain SDEL_RS03390 PF01026 TatD related DNase SDEL_RS03395 PF05257 CHAP domain SDEL_RS03395 PF01476 LysM domain SDEL_RS03400 PF03330 Lytic transglycolase SDEL_RS03400 PF05036 Sporulation related domain SDEL_RS03405 PF00475 Imidazoleglycerol-phosphate dehydratase SDEL_RS03425 PF01926 50S ribosome-binding GTPase SDEL_RS03440 PF03717 Penicillin-binding Protein dimerisation domain SDEL_RS03440 PF00905 Penicillin binding protein transpeptidase domain SDEL_RS03445 PF02130 Uncharacterized protein family UPF0054 SDEL_RS03455 PF01588 Putative tRNA binding domain SDEL_RS03455 PF09334 tRNA synthetases class I (M) SDEL_RS03455 PF00133 tRNA synthetases class I (I, L, M and V) SDEL_RS03465 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain SDEL_RS03490 PF00749 tRNA synthetases class I (E and Q), catalytic domain SDEL_RS03495 PF00749 tRNA synthetases class I (E and Q), catalytic domain SDEL_RS03495 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain SDEL_RS03520 PF00486 Transcriptional regulatory protein, C terminal SDEL_RS03520 PF00072 Response regulator receiver domain SDEL_RS03525 PF00939 Sodium:sulfate symporter transmembrane region SDEL_RS03545 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB SDEL_RS03545 PF17287 POTRA domain SDEL_RS03545 PF08479 POTRA domain, ShlB-type SDEL_RS03570 PF00005 ABC transporter SDEL_RS03570 PF12704 MacB-like periplasmic core domain SDEL_RS03570 PF02687 FtsX-like permease family SDEL_RS03595 PF05140 ResB-like family SDEL_RS03595 PF01578 Cytochrome C assembly protein SDEL_RS03600 PF03916 Polysulphide reductase, NrfD SDEL_RS03605 PF13247 4Fe-4S dicluster domain SDEL_RS03605 PF00037 4Fe-4S binding domain SDEL_RS03610 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase SDEL_RS03610 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SDEL_RS03620 PF00512 His Kinase A (phospho-acceptor) domain SDEL_RS03620 PF00672 HAMP domain SDEL_RS03620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SDEL_RS03625 PF00072 Response regulator receiver domain SDEL_RS03625 PF00486 Transcriptional regulatory protein, C terminal SDEL_RS03630 PF03264 NapC/NirT cytochrome c family, N-terminal region SDEL_RS03635 PF02335 Cytochrome c552 SDEL_RS03640 PF05140 ResB-like family SDEL_RS03640 PF01578 Cytochrome C assembly protein SDEL_RS03665 PF04172 LrgB-like family SDEL_RS03670 PF03788 LrgA family SDEL_RS03685 PF02472 Biopolymer transport protein ExbD/TolR SDEL_RS03690 PF01618 MotA/TolQ/ExbB proton channel family SDEL_RS03725 PF00384 Molybdopterin oxidoreductase SDEL_RS03725 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SDEL_RS03725 PF10518 TAT (twin-arginine translocation) pathway signal sequence SDEL_RS03725 PF01568 Molydopterin dinucleotide binding domain SDEL_RS03730 PF12800 4Fe-4S binding domain SDEL_RS03730 PF12838 4Fe-4S dicluster domain SDEL_RS03735 PF12801 4Fe-4S binding domain SDEL_RS03735 PF00037 4Fe-4S binding domain SDEL_RS03740 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) SDEL_RS03745 PF13187 4Fe-4S dicluster domain SDEL_RS03745 PF12800 4Fe-4S binding domain SDEL_RS03745 PF00037 4Fe-4S binding domain SDEL_RS03760 PF01926 50S ribosome-binding GTPase SDEL_RS03760 PF06071 Protein of unknown function (DUF933) SDEL_RS03780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SDEL_RS03780 PF00512 His Kinase A (phospho-acceptor) domain SDEL_RS03780 PF00989 PAS fold SDEL_RS03785 PF00486 Transcriptional regulatory protein, C terminal SDEL_RS03785 PF00072 Response regulator receiver domain SDEL_RS03785 PF01627 Hpt domain SDEL_RS03795 PF00384 Molybdopterin oxidoreductase SDEL_RS03795 PF01568 Molydopterin dinucleotide binding domain SDEL_RS03795 PF18364 Molybdopterin oxidoreductase N-terminal domain SDEL_RS03805 PF00355 Rieske [2Fe-2S] domain SDEL_RS03805 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal SDEL_RS03810 PF00033 Cytochrome b/b6/petB SDEL_RS03810 PF00032 Cytochrome b(C-terminal)/b6/petD SDEL_RS03815 PF02167 Cytochrome C1 family SDEL_RS03820 PF00486 Transcriptional regulatory protein, C terminal SDEL_RS03820 PF00072 Response regulator receiver domain SDEL_RS03825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SDEL_RS03825 PF00512 His Kinase A (phospho-acceptor) domain SDEL_RS03825 PF00989 PAS fold SDEL_RS03830 PF01546 Peptidase family M20/M25/M40 SDEL_RS03830 PF07687 Peptidase dimerisation domain SDEL_RS03835 PF07687 Peptidase dimerisation domain SDEL_RS03835 PF01546 Peptidase family M20/M25/M40 SDEL_RS03840 PF03606 C4-dicarboxylate anaerobic carrier SDEL_RS03845 PF00563 EAL domain SDEL_RS03845 PF08495 FIST N domain SDEL_RS03845 PF00990 Diguanylate cyclase, GGDEF domain SDEL_RS03845 PF10442 FIST C domain SDEL_RS03850 PF02666 Phosphatidylserine decarboxylase SDEL_RS03855 PF00271 Helicase conserved C-terminal domain SDEL_RS03855 PF00270 DEAD/DEAH box helicase SDEL_RS03855 PF03880 DbpA RNA binding domain SDEL_RS03865 PF01709 Transcriptional regulator SDEL_RS03880 PF00118 TCP-1/cpn60 chaperonin family SDEL_RS03885 PF00166 Chaperonin 10 Kd subunit SDEL_RS03895 PF13356 Arm DNA-binding domain SDEL_RS03895 PF00589 Phage integrase family SDEL_RS03940 PF03432 Relaxase/Mobilisation nuclease domain SDEL_RS03940 PF18821 Large polyvalent protein-associated domain 7 SDEL_RS04000 PF01695 IstB-like ATP binding protein SDEL_RS04020 PF05016 ParE toxin of type II toxin-antitoxin system, parDE SDEL_RS04045 PF00665 Integrase core domain SDEL_RS04045 PF02796 Helix-turn-helix domain of resolvase SDEL_RS04050 PF05981 CreA protein SDEL_RS04065 PF00672 HAMP domain SDEL_RS04065 PF00563 EAL domain SDEL_RS04065 PF00990 Diguanylate cyclase, GGDEF domain SDEL_RS04065 PF17154 Gammaproteobacterial periplasmic sensor domain SDEL_RS04070 PF00664 ABC transporter transmembrane region SDEL_RS04070 PF00005 ABC transporter SDEL_RS04070 PF03412 Peptidase C39 family SDEL_RS04080 PF00196 Bacterial regulatory proteins, luxR family SDEL_RS04080 PF00072 Response regulator receiver domain SDEL_RS04095 PF06738 Putative threonine/serine exporter SDEL_RS04100 PF12821 Threonine/Serine exporter, ThrE SDEL_RS04105 PF00403 Heavy-metal-associated domain SDEL_RS04110 PF01022 Bacterial regulatory protein, arsR family SDEL_RS04125 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SDEL_RS04125 PF12838 4Fe-4S dicluster domain SDEL_RS04125 PF00384 Molybdopterin oxidoreductase SDEL_RS04125 PF01568 Molydopterin dinucleotide binding domain SDEL_RS04125 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region SDEL_RS04130 PF01568 Molydopterin dinucleotide binding domain SDEL_RS04130 PF00384 Molybdopterin oxidoreductase SDEL_RS04130 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SDEL_RS04135 PF13247 4Fe-4S dicluster domain SDEL_RS04150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SDEL_RS04150 PF03459 TOBE domain SDEL_RS04160 PF02537 CrcB-like protein, Camphor Resistance (CrcB) SDEL_RS04170 PF00005 ABC transporter SDEL_RS04175 PF01032 FecCD transport family SDEL_RS04190 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SDEL_RS04190 PF08447 PAS fold SDEL_RS04190 PF13426 PAS domain SDEL_RS04195 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SDEL_RS04195 PF00672 HAMP domain SDEL_RS04195 PF02743 Cache domain SDEL_RS04200 PF02581 Thiamine monophosphate synthase SDEL_RS04215 PF01810 LysE type translocator SDEL_RS04220 PF00892 EamA-like transporter family SDEL_RS04225 PF13472 GDSL-like Lipase/Acylhydrolase family SDEL_RS04240 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SDEL_RS04240 PF07733 Bacterial DNA polymerase III alpha NTPase domain SDEL_RS04240 PF14579 Helix-hairpin-helix motif SDEL_RS04240 PF02811 PHP domain SDEL_RS04240 PF11490 DNA polymerase III polC-type N-terminus II SDEL_RS04240 PF00929 Exonuclease SDEL_RS04255 PF01717 Cobalamin-independent synthase, Catalytic domain SDEL_RS04255 PF08267 Cobalamin-independent synthase, N-terminal domain SDEL_RS04265 PF01435 Peptidase family M48 SDEL_RS04275 PF01739 CheR methyltransferase, SAM binding domain SDEL_RS04280 PF00072 Response regulator receiver domain SDEL_RS04280 PF01339 CheB methylesterase SDEL_RS04285 PF00883 Cytosol aminopeptidase family, catalytic domain SDEL_RS04285 PF02789 Cytosol aminopeptidase family, N-terminal domain SDEL_RS04290 PF09335 SNARE associated Golgi protein SDEL_RS04295 PF00291 Pyridoxal-phosphate dependent enzyme SDEL_RS04300 PF00156 Phosphoribosyl transferase domain SDEL_RS04310 PF02502 Ribose/Galactose Isomerase SDEL_RS04315 PF02163 Peptidase family M50 SDEL_RS04320 PF10502 Signal peptidase, peptidase S26 SDEL_RS04325 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain SDEL_RS04325 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain SDEL_RS04335 PF00202 Aminotransferase class-III SDEL_RS04350 PF04055 Radical SAM superfamily SDEL_RS04355 PF05193 Peptidase M16 inactive domain SDEL_RS04360 PF04851 Type III restriction enzyme, res subunit SDEL_RS04360 PF00271 Helicase conserved C-terminal domain SDEL_RS04390 PF02623 FliW protein SDEL_RS04395 PF13525 Outer membrane lipoprotein SDEL_RS04400 PF02190 ATP-dependent protease La (LON) substrate-binding domain SDEL_RS04400 PF00004 ATPase family associated with various cellular activities (AAA) SDEL_RS04400 PF05362 Lon protease (S16) C-terminal proteolytic domain SDEL_RS04405 PF01084 Ribosomal protein S18 SDEL_RS04410 PF00436 Single-strand binding protein family SDEL_RS04415 PF01250 Ribosomal protein S6 SDEL_RS04420 PF06144 DNA polymerase III, delta subunit SDEL_RS04425 PF00773 RNB domain SDEL_RS04435 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain SDEL_RS04435 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain SDEL_RS04440 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain SDEL_RS04445 PF03776 Septum formation topological specificity factor MinE SDEL_RS04465 PF03652 Holliday junction resolvase SDEL_RS04470 PF03458 UPF0126 domain SDEL_RS04475 PF00202 Aminotransferase class-III SDEL_RS04490 PF01648 4'-phosphopantetheinyl transferase superfamily SDEL_RS04495 PF03748 Flagellar basal body-associated protein FliL SDEL_RS04500 PF18073 Rubredoxin metal binding domain SDEL_RS04505 PF00448 SRP54-type protein, GTPase domain SDEL_RS04510 PF00578 AhpC/TSA family SDEL_RS04520 PF01966 HD domain SDEL_RS04520 PF12072 Domain of unknown function (DUF3552) SDEL_RS04520 PF00013 KH domain SDEL_RS04525 PF00005 ABC transporter SDEL_RS04525 PF00664 ABC transporter transmembrane region SDEL_RS04545 PF01758 Sodium Bile acid symporter family SDEL_RS04550 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SDEL_RS04555 PF00072 Response regulator receiver domain SDEL_RS04555 PF00158 Sigma-54 interaction domain SDEL_RS04560 PF00563 EAL domain SDEL_RS04560 PF00990 Diguanylate cyclase, GGDEF domain SDEL_RS04560 PF08448 PAS fold SDEL_RS04565 PF08448 PAS fold SDEL_RS04565 PF08447 PAS fold SDEL_RS04565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SDEL_RS04575 PF04073 Aminoacyl-tRNA editing domain SDEL_RS04600 PF18019 HD domain SDEL_RS04600 PF00270 DEAD/DEAH box helicase SDEL_RS04600 PF18395 Cas3 C-terminal domain SDEL_RS04610 PF01867 CRISPR associated protein Cas1 SDEL_RS04635 PF00925 GTP cyclohydrolase II SDEL_RS04635 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase SDEL_RS04640 PF02254 TrkA-N domain SDEL_RS04640 PF00999 Sodium/hydrogen exchanger family SDEL_RS04665 PF00072 Response regulator receiver domain SDEL_RS04700 PF02146 Sir2 family SDEL_RS04715 PF00665 Integrase core domain SDEL_RS04715 PF02796 Helix-turn-helix domain of resolvase SDEL_RS04720 PF01695 IstB-like ATP binding protein SDEL_RS04770 PF01695 IstB-like ATP binding protein SDEL_RS04775 PF02796 Helix-turn-helix domain of resolvase SDEL_RS04775 PF00665 Integrase core domain SDEL_RS04820 PF00665 Integrase core domain SDEL_RS04820 PF02796 Helix-turn-helix domain of resolvase SDEL_RS04825 PF01695 IstB-like ATP binding protein SDEL_RS04850 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system SDEL_RS04900 PF01966 HD domain SDEL_RS04935 PF00589 Phage integrase family SDEL_RS04935 PF14659 Phage integrase, N-terminal SAM-like domain SDEL_RS04945 PF00216 Bacterial DNA-binding protein SDEL_RS04955 PF09397 Ftsk gamma domain SDEL_RS04955 PF17854 FtsK alpha domain SDEL_RS04955 PF01580 FtsK/SpoIIIE family SDEL_RS04960 PF00330 Aconitase family (aconitate hydratase) SDEL_RS04960 PF06434 Aconitate hydratase 2 N-terminus SDEL_RS04960 PF11791 Aconitate B N-terminal domain SDEL_RS04965 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SDEL_RS04970 PF02896 PEP-utilising enzyme, TIM barrel domain SDEL_RS04970 PF00391 PEP-utilising enzyme, mobile domain SDEL_RS04970 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain SDEL_RS04980 PF01636 Phosphotransferase enzyme family SDEL_RS04985 PF01327 Polypeptide deformylase SDEL_RS04990 PF08359 YsiA-like protein, C-terminal region SDEL_RS04990 PF00440 Bacterial regulatory proteins, tetR family SDEL_RS05005 PF00873 AcrB/AcrD/AcrF family SDEL_RS05020 PF16591 Helical bimodular sensor domain SDEL_RS05020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SDEL_RS05020 PF00672 HAMP domain SDEL_RS05030 PF00664 ABC transporter transmembrane region SDEL_RS05030 PF03412 Peptidase C39 family SDEL_RS05030 PF00005 ABC transporter SDEL_RS05040 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) SDEL_RS05040 PF06594 Haemolysin-type calcium binding protein related domain SDEL_RS05110 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) SDEL_RS05110 PF06594 Haemolysin-type calcium binding protein related domain SDEL_RS05125 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB SDEL_RS05125 PF08479 POTRA domain, ShlB-type SDEL_RS05130 PF01695 IstB-like ATP binding protein SDEL_RS05135 PF02796 Helix-turn-helix domain of resolvase SDEL_RS05135 PF00665 Integrase core domain SDEL_RS05145 PF01695 IstB-like ATP binding protein SDEL_RS05150 PF00665 Integrase core domain SDEL_RS05150 PF02796 Helix-turn-helix domain of resolvase SDEL_RS05185 PF00291 Pyridoxal-phosphate dependent enzyme SDEL_RS05185 PF13291 ACT domain SDEL_RS05190 PF13380 CoA binding domain SDEL_RS05195 PF05958 tRNA (Uracil-5-)-methyltransferase SDEL_RS05215 PF04376 Arginine-tRNA-protein transferase, N terminus SDEL_RS05215 PF04377 Arginine-tRNA-protein transferase, C terminus SDEL_RS05225 PF04552 Sigma-54, DNA binding domain SDEL_RS05225 PF00309 Sigma-54 factor, Activator interacting domain (AID) SDEL_RS05225 PF04963 Sigma-54 factor, core binding domain SDEL_RS05230 PF00005 ABC transporter SDEL_RS05230 PF12399 Branched-chain amino acid ATP-binding cassette transporter SDEL_RS05235 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE SDEL_RS05240 PF02885 Glycosyl transferase family, helical bundle domain SDEL_RS05240 PF00591 Glycosyl transferase family, a/b domain SDEL_RS05245 PF01479 S4 domain SDEL_RS05250 PF00764 Arginosuccinate synthase SDEL_RS05260 PF01281 Ribosomal protein L9, N-terminal domain SDEL_RS05260 PF03948 Ribosomal protein L9, C-terminal domain SDEL_RS05265 PF00227 Proteasome subunit SDEL_RS05270 PF10431 C-terminal, D2-small domain, of ClpB protein SDEL_RS05270 PF07724 AAA domain (Cdc48 subfamily) SDEL_RS05275 PF07650 KH domain SDEL_RS05275 PF01926 50S ribosome-binding GTPase SDEL_RS05295 PF03958 Bacterial type II/III secretion system short domain SDEL_RS05295 PF00263 Bacterial type II and III secretion system protein SDEL_RS05310 PF00437 Type II/IV secretion system protein SDEL_RS05310 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain SDEL_RS05315 PF00482 Type II secretion system (T2SS), protein F SDEL_RS05325 PF02107 Flagellar L-ring protein SDEL_RS05335 PF00871 Acetokinase family SDEL_RS05340 PF07085 DRTGG domain SDEL_RS05340 PF01515 Phosphate acetyl/butaryl transferase SDEL_RS05345 PF08245 Mur ligase middle domain SDEL_RS05345 PF02875 Mur ligase family, glutamate ligase domain SDEL_RS05345 PF01225 Mur ligase family, catalytic domain SDEL_RS05350 PF00708 Acylphosphatase SDEL_RS05355 PF12697 Alpha/beta hydrolase family SDEL_RS05355 PF08241 Methyltransferase domain SDEL_RS05365 PF01820 D-ala D-ala ligase N-terminus SDEL_RS05365 PF07478 D-ala D-ala ligase C-terminus SDEL_RS05370 PF07499 RuvA, C-terminal domain SDEL_RS05370 PF01330 RuvA N terminal domain SDEL_RS05380 PF03023 Lipid II flippase MurJ SDEL_RS05385 PF01406 tRNA synthetases class I (C) catalytic domain SDEL_RS05385 PF09190 DALR domain SDEL_RS05390 PF00664 ABC transporter transmembrane region SDEL_RS05390 PF00005 ABC transporter SDEL_RS05395 PF01180 Dihydroorotate dehydrogenase SDEL_RS05405 PF00701 Dihydrodipicolinate synthetase family SDEL_RS05415 PF01066 CDP-alcohol phosphatidyltransferase SDEL_RS05420 PF02163 Peptidase family M50 SDEL_RS05420 PF17820 PDZ domain SDEL_RS05425 PF01168 Alanine racemase, N-terminal domain SDEL_RS05430 PF17158 Membrane-associated sensor, integral membrane domain SDEL_RS05430 PF00990 Diguanylate cyclase, GGDEF domain SDEL_RS05445 PF01914 MarC family integral membrane protein SDEL_RS05450 PF00375 Sodium:dicarboxylate symporter family SDEL_RS05455 PF13726 Na+-H+ antiporter family SDEL_RS05455 PF03553 Na+/H+ antiporter family SDEL_RS05460 PF09364 XFP N-terminal domain SDEL_RS05460 PF09363 XFP C-terminal domain SDEL_RS05460 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase SDEL_RS05465 PF01638 HxlR-like helix-turn-helix SDEL_RS05470 PF02525 Flavodoxin-like fold SDEL_RS05475 PF00881 Nitroreductase family SDEL_RS05480 PF02743 Cache domain SDEL_RS05480 PF00672 HAMP domain SDEL_RS05480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SDEL_RS05505 PF17674 HHH domain SDEL_RS05505 PF00575 S1 RNA binding domain SDEL_RS05505 PF09371 Tex-like protein N-terminal domain SDEL_RS05505 PF16921 Tex protein YqgF-like domain SDEL_RS05520 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SDEL_RS05520 PF00205 Thiamine pyrophosphate enzyme, central domain SDEL_RS05520 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SDEL_RS05525 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg SDEL_RS05525 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase SDEL_RS05525 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II SDEL_RS05540 PF00549 CoA-ligase SDEL_RS05540 PF02629 CoA binding domain SDEL_RS05545 PF08442 ATP-grasp domain SDEL_RS05545 PF00549 CoA-ligase SDEL_RS05550 PF00056 lactate/malate dehydrogenase, NAD binding domain SDEL_RS05550 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain SDEL_RS05555 PF03971 Monomeric isocitrate dehydrogenase SDEL_RS05570 PF13419 Haloacid dehalogenase-like hydrolase SDEL_RS05580 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA SDEL_RS05585 PF02769 AIR synthase related protein, C-terminal domain SDEL_RS05585 PF00586 AIR synthase related protein, N-terminal domain SDEL_RS05590 PF01924 Hydrogenase formation hypA family SDEL_RS05595 PF01455 HupF/HypC family SDEL_RS05600 PF02492 CobW/HypB/UreG, nucleotide-binding domain SDEL_RS05610 PF01402 Ribbon-helix-helix protein, copG family SDEL_RS05610 PF08753 NikR C terminal nickel binding domain SDEL_RS05615 PF00708 Acylphosphatase SDEL_RS05615 PF17788 HypF Kae1-like domain SDEL_RS05615 PF01300 Telomere recombination SDEL_RS05615 PF07503 HypF finger SDEL_RS05625 PF01750 Hydrogenase maturation protease SDEL_RS05630 PF01292 Prokaryotic cytochrome b561 SDEL_RS05635 PF00374 Nickel-dependent hydrogenase SDEL_RS05640 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit SDEL_RS05640 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal SDEL_RS05640 PF10518 TAT (twin-arginine translocation) pathway signal sequence SDEL_RS05650 PF00342 Phosphoglucose isomerase SDEL_RS05655 PF04055 Radical SAM superfamily SDEL_RS05655 PF08497 Radical SAM N-terminal SDEL_RS05665 PF00589 Phage integrase family SDEL_RS05665 PF14659 Phage integrase, N-terminal SAM-like domain SDEL_RS05710 PF00813 FliP family SDEL_RS05715 PF12804 MobA-like NTP transferase domain SDEL_RS05715 PF00132 Bacterial transferase hexapeptide (six repeats) SDEL_RS05720 PF02441 Flavoprotein SDEL_RS05720 PF04127 DNA / pantothenate metabolism flavoprotein SDEL_RS05730 PF01478 Type IV leader peptidase family SDEL_RS05730 PF06750 Bacterial Peptidase A24 N-terminal domain SDEL_RS05740 PF01416 tRNA pseudouridine synthase SDEL_RS05745 PF00933 Glycosyl hydrolase family 3 N terminal domain SDEL_RS05750 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus SDEL_RS05750 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus SDEL_RS05755 PF02637 GatB domain SDEL_RS05755 PF02934 GatB/GatE catalytic domain SDEL_RS05770 PF00119 ATP synthase A chain SDEL_RS05775 PF01361 Tautomerase enzyme SDEL_RS05780 PF00916 Sulfate permease family SDEL_RS05780 PF01740 STAS domain SDEL_RS05790 PF00528 Binding-protein-dependent transport system inner membrane component SDEL_RS05790 PF12911 N-terminal TM domain of oligopeptide transport permease C SDEL_RS05795 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SDEL_RS05795 PF07196 Flagellin hook IN motif SDEL_RS05815 PF02119 Flagellar P-ring protein SDEL_RS05835 PF02465 Flagellar hook-associated protein 2 N-terminus SDEL_RS05835 PF07195 Flagellar hook-associated protein 2 C-terminus SDEL_RS05835 PF07196 Flagellin hook IN motif SDEL_RS05840 PF02561 Flagellar protein FliS SDEL_RS05855 PF00875 DNA photolyase SDEL_RS05855 PF03441 FAD binding domain of DNA photolyase SDEL_RS05865 PF03109 ABC1 family SDEL_RS05870 PF00881 Nitroreductase family SDEL_RS05885 PF00465 Iron-containing alcohol dehydrogenase SDEL_RS05895 PF07690 Major Facilitator Superfamily SDEL_RS05905 PF02129 X-Pro dipeptidyl-peptidase (S15 family) SDEL_RS05910 PF06719 AraC-type transcriptional regulator N-terminus SDEL_RS05910 PF12833 Helix-turn-helix domain SDEL_RS05915 PF02321 Outer membrane efflux protein SDEL_RS05920 PF00873 AcrB/AcrD/AcrF family SDEL_RS05925 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SDEL_RS05930 PF00440 Bacterial regulatory proteins, tetR family SDEL_RS05935 PF01618 MotA/TolQ/ExbB proton channel family SDEL_RS05940 PF13677 Membrane MotB of proton-channel complex MotA/MotB SDEL_RS05940 PF00691 OmpA family SDEL_RS05945 PF00005 ABC transporter SDEL_RS05945 PF16326 ABC transporter C-terminal domain SDEL_RS05945 PF12848 ABC transporter SDEL_RS05955 PF01625 Peptide methionine sulfoxide reductase SDEL_RS05960 PF00753 Metallo-beta-lactamase superfamily SDEL_RS05960 PF12706 Beta-lactamase superfamily domain SDEL_RS05965 PF02535 ZIP Zinc transporter SDEL_RS05970 PF02110 Hydroxyethylthiazole kinase family SDEL_RS05975 PF08543 Phosphomethylpyrimidine kinase SDEL_RS05980 PF02254 TrkA-N domain SDEL_RS05980 PF00999 Sodium/hydrogen exchanger family SDEL_RS05980 PF02080 TrkA-C domain SDEL_RS05985 PF17763 Glutaminase/Asparaginase C-terminal domain SDEL_RS05985 PF00710 Asparaginase, N-terminal SDEL_RS06000 PF00072 Response regulator receiver domain SDEL_RS06000 PF00486 Transcriptional regulatory protein, C terminal SDEL_RS06005 PF01142 tRNA pseudouridine synthase D (TruD) SDEL_RS06010 PF02769 AIR synthase related protein, C-terminal domain SDEL_RS06010 PF00586 AIR synthase related protein, N-terminal domain SDEL_RS06030 PF13722 5TM C-terminal transporter carbon starvation CstA SDEL_RS06030 PF02554 Carbon starvation protein CstA SDEL_RS06035 PF04328 Selenoprotein, putative SDEL_RS06040 PF02492 CobW/HypB/UreG, nucleotide-binding domain SDEL_RS06040 PF07683 Cobalamin synthesis protein cobW C-terminal domain SDEL_RS06045 PF00155 Aminotransferase class I and II SDEL_RS06070 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit SDEL_RS06080 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit SDEL_RS06080 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit SDEL_RS06080 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit SDEL_RS06085 PF00374 Nickel-dependent hydrogenase SDEL_RS06085 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit SDEL_RS06090 PF13247 4Fe-4S dicluster domain SDEL_RS06095 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA SDEL_RS06100 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster SDEL_RS06100 PF07992 Pyridine nucleotide-disulphide oxidoreductase SDEL_RS06105 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SDEL_RS06105 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SDEL_RS06105 PF01842 ACT domain SDEL_RS06110 PF00672 HAMP domain SDEL_RS06110 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SDEL_RS06110 PF12729 Four helix bundle sensory module for signal transduction SDEL_RS06120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SDEL_RS06120 PF00672 HAMP domain SDEL_RS06140 PF01063 Amino-transferase class IV SDEL_RS06145 PF17158 Membrane-associated sensor, integral membrane domain SDEL_RS06145 PF00990 Diguanylate cyclase, GGDEF domain SDEL_RS06155 PF01863 Protein of unknown function DUF45 SDEL_RS06185 PF01594 AI-2E family transporter SDEL_RS06200 PF00005 ABC transporter SDEL_RS06205 PF05193 Peptidase M16 inactive domain SDEL_RS06205 PF00675 Insulinase (Peptidase family M16) SDEL_RS06225 PF03707 Bacterial signalling protein N terminal repeat SDEL_RS06225 PF00990 Diguanylate cyclase, GGDEF domain SDEL_RS06225 PF00563 EAL domain SDEL_RS06230 PF18389 TrmO C-terminal domain SDEL_RS06230 PF01980 tRNA-methyltransferase O SDEL_RS06240 PF02574 Homocysteine S-methyltransferase SDEL_RS06255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SDEL_RS06255 PF08447 PAS fold SDEL_RS06255 PF08448 PAS fold SDEL_RS06260 PF00563 EAL domain SDEL_RS06260 PF08495 FIST N domain SDEL_RS06260 PF10442 FIST C domain SDEL_RS06260 PF00990 Diguanylate cyclase, GGDEF domain SDEL_RS06265 PF00486 Transcriptional regulatory protein, C terminal SDEL_RS06265 PF00072 Response regulator receiver domain SDEL_RS06270 PF03167 Uracil DNA glycosylase superfamily SDEL_RS06280 PF03061 Thioesterase superfamily SDEL_RS06285 PF00589 Phage integrase family SDEL_RS06285 PF14659 Phage integrase, N-terminal SAM-like domain SDEL_RS06315 PF01695 IstB-like ATP binding protein SDEL_RS06320 PF00665 Integrase core domain SDEL_RS06320 PF02796 Helix-turn-helix domain of resolvase SDEL_RS06335 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) SDEL_RS06335 PF06594 Haemolysin-type calcium binding protein related domain SDEL_RS06355 PF02796 Helix-turn-helix domain of resolvase SDEL_RS06355 PF00665 Integrase core domain SDEL_RS06360 PF01695 IstB-like ATP binding protein SDEL_RS06370 PF01695 IstB-like ATP binding protein SDEL_RS06375 PF00665 Integrase core domain SDEL_RS06375 PF02796 Helix-turn-helix domain of resolvase SDEL_RS06395 PF00004 ATPase family associated with various cellular activities (AAA) SDEL_RS06395 PF01434 Peptidase family M41 SDEL_RS06395 PF17862 AAA+ lid domain SDEL_RS06400 PF00919 Uncharacterized protein family UPF0004 SDEL_RS06400 PF04055 Radical SAM superfamily SDEL_RS06410 PF01761 3-dehydroquinate synthase SDEL_RS06420 PF01702 Queuine tRNA-ribosyltransferase SDEL_RS06425 PF00589 Phage integrase family SDEL_RS06425 PF18644 Phage integrase SAM-like domain SDEL_RS06435 PF00300 Histidine phosphatase superfamily (branch 1) SDEL_RS06445 PF00486 Transcriptional regulatory protein, C terminal SDEL_RS06445 PF00072 Response regulator receiver domain SDEL_RS06450 PF00512 His Kinase A (phospho-acceptor) domain SDEL_RS06450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SDEL_RS06455 PF00939 Sodium:sulfate symporter transmembrane region SDEL_RS06460 PF05681 Fumarate hydratase (Fumerase) SDEL_RS06460 PF05683 Fumarase C-terminus SDEL_RS06465 PF05683 Fumarase C-terminus SDEL_RS06465 PF05681 Fumarate hydratase (Fumerase) SDEL_RS06470 PF09861 Lactate racemase N-terminal domain SDEL_RS06475 PF01969 Protein of unknown function DUF111 SDEL_RS06480 PF02540 NAD synthase SDEL_RS06485 PF00731 AIR carboxylase SDEL_RS06495 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SDEL_RS06500 PF00994 Probable molybdopterin binding domain SDEL_RS06500 PF03454 MoeA C-terminal region (domain IV) SDEL_RS06500 PF03453 MoeA N-terminal region (domain I and II) SDEL_RS06515 PF02441 Flavoprotein SDEL_RS06520 PF01467 Cytidylyltransferase-like SDEL_RS06525 PF02223 Thymidylate kinase SDEL_RS06530 PF03129 Anticodon binding domain SDEL_RS06530 PF13393 Histidyl-tRNA synthetase SDEL_RS06535 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain SDEL_RS06535 PF17944 Arginine decarboxylase C-terminal helical extension SDEL_RS06535 PF17810 Arginine decarboxylase helical bundle domain SDEL_RS06540 PF00132 Bacterial transferase hexapeptide (six repeats) SDEL_RS06545 PF00155 Aminotransferase class I and II SDEL_RS06550 PF07992 Pyridine nucleotide-disulphide oxidoreductase SDEL_RS06550 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster SDEL_RS06560 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD SDEL_RS06560 PF00132 Bacterial transferase hexapeptide (six repeats) SDEL_RS06565 PF10369 Small subunit of acetolactate synthase SDEL_RS06570 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SDEL_RS06570 PF00205 Thiamine pyrophosphate enzyme, central domain SDEL_RS06570 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SDEL_RS06585 PF07992 Pyridine nucleotide-disulphide oxidoreductase SDEL_RS06600 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ SDEL_RS06605 PF04166 Pyridoxal phosphate biosynthetic protein PdxA SDEL_RS06620 PF00218 Indole-3-glycerol phosphate synthase SDEL_RS06630 PF03692 Putative zinc- or iron-chelating domain SDEL_RS06635 PF08468 Methyltransferase small domain N-terminal SDEL_RS06635 PF05175 Methyltransferase small domain SDEL_RS06645 PF07992 Pyridine nucleotide-disulphide oxidoreductase SDEL_RS06650 PF00171 Aldehyde dehydrogenase family SDEL_RS06655 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SDEL_RS06655 PF00005 ABC transporter SDEL_RS06660 PF09335 SNARE associated Golgi protein SDEL_RS06665 PF01474 Class-II DAHP synthetase family SDEL_RS06670 PF13426 PAS domain SDEL_RS06670 PF08447 PAS fold SDEL_RS06670 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SDEL_RS06685 PF02915 Rubrerythrin SDEL_RS06695 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase SDEL_RS06700 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain SDEL_RS06700 PF03900 Porphobilinogen deaminase, C-terminal domain SDEL_RS06710 PF04186 FxsA cytoplasmic membrane protein SDEL_RS06715 PF03129 Anticodon binding domain SDEL_RS06715 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SDEL_RS06715 PF04073 Aminoacyl-tRNA editing domain SDEL_RS06720 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain SDEL_RS06720 PF01488 Shikimate / quinate 5-dehydrogenase SDEL_RS06720 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain SDEL_RS06725 PF00348 Polyprenyl synthetase SDEL_RS06740 PF01053 Cys/Met metabolism PLP-dependent enzyme SDEL_RS06745 PF02082 Transcriptional regulator SDEL_RS06750 PF00291 Pyridoxal-phosphate dependent enzyme SDEL_RS06755 PF00990 Diguanylate cyclase, GGDEF domain SDEL_RS06755 PF05230 MASE2 domain SDEL_RS06760 PF00255 Glutathione peroxidase SDEL_RS06765 PF08264 Anticodon-binding domain of tRNA SDEL_RS06765 PF10458 Valyl tRNA synthetase tRNA binding arm SDEL_RS06765 PF00133 tRNA synthetases class I (I, L, M and V) SDEL_RS06770 PF00994 Probable molybdopterin binding domain SDEL_RS06775 PF00815 Histidinol dehydrogenase SDEL_RS06785 PF01116 Fructose-bisphosphate aldolase class-II SDEL_RS06795 PF00633 Helix-hairpin-helix motif SDEL_RS06795 PF10576 Iron-sulfur binding domain of endonuclease III SDEL_RS06795 PF00730 HhH-GPD superfamily base excision DNA repair protein SDEL_RS06805 PF01546 Peptidase family M20/M25/M40 SDEL_RS06805 PF07687 Peptidase dimerisation domain SDEL_RS06815 PF08003 Protein of unknown function (DUF1698) SDEL_RS06820 PF01008 Initiation factor 2 subunit family SDEL_RS06820 PF03061 Thioesterase superfamily SDEL_RS06825 PF00753 Metallo-beta-lactamase superfamily SDEL_RS06830 PF02540 NAD synthase SDEL_RS06835 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family SDEL_RS06840 PF02606 Tetraacyldisaccharide-1-P 4'-kinase SDEL_RS06845 PF00696 Amino acid kinase family SDEL_RS06850 PF00291 Pyridoxal-phosphate dependent enzyme SDEL_RS06855 PF02348 Cytidylyltransferase SDEL_RS06865 PF00085 Thioredoxin SDEL_RS06865 PF11412 Disulphide bond corrector protein DsbC SDEL_RS06865 PF02683 Cytochrome C biogenesis protein transmembrane region SDEL_RS06870 PF03976 Polyphosphate kinase 2 (PPK2) SDEL_RS06875 PF00072 Response regulator receiver domain SDEL_RS06880 PF00012 Hsp70 protein SDEL_RS06885 PF01025 GrpE SDEL_RS06900 PF00312 Ribosomal protein S15 SDEL_RS06905 PF02082 Transcriptional regulator SDEL_RS06910 PF00771 FHIPEP family SDEL_RS06925 PF13649 Methyltransferase domain SDEL_RS06930 PF01687 Riboflavin kinase SDEL_RS06930 PF06574 FAD synthetase SDEL_RS06935 PF00163 Ribosomal protein S4/S9 N-terminal domain SDEL_RS06935 PF01479 S4 domain SDEL_RS06940 PF12826 Helix-hairpin-helix motif SDEL_RS06940 PF01653 NAD-dependent DNA ligase adenylation domain SDEL_RS06940 PF03120 NAD-dependent DNA ligase OB-fold domain SDEL_RS06940 PF00533 BRCA1 C Terminus (BRCT) domain SDEL_RS06945 PF01925 Sulfite exporter TauE/SafE SDEL_RS06955 PF00809 Pterin binding enzyme SDEL_RS06960 PF12169 DNA polymerase III subunits gamma and tau domain III SDEL_RS06970 PF00696 Amino acid kinase family SDEL_RS06970 PF01842 ACT domain SDEL_RS06970 PF13840 ACT domain SDEL_RS06975 PF00293 NUDIX domain SDEL_RS06980 PF06969 HemN C-terminal domain SDEL_RS06980 PF04055 Radical SAM superfamily SDEL_RS06985 PF02254 TrkA-N domain SDEL_RS06985 PF00999 Sodium/hydrogen exchanger family SDEL_RS06990 PF13411 MerR HTH family regulatory protein SDEL_RS06995 PF01556 DnaJ C terminal domain SDEL_RS06995 PF00226 DnaJ domain SDEL_RS07000 PF17820 PDZ domain SDEL_RS07000 PF13180 PDZ domain SDEL_RS07005 PF00486 Transcriptional regulatory protein, C terminal SDEL_RS07005 PF00072 Response regulator receiver domain SDEL_RS07025 PF00271 Helicase conserved C-terminal domain SDEL_RS07025 PF02810 SEC-C motif SDEL_RS07025 PF07517 SecA DEAD-like domain SDEL_RS07025 PF01043 SecA preprotein cross-linking domain SDEL_RS07025 PF07516 SecA Wing and Scaffold domain SDEL_RS07035 PF06965 Na+/H+ antiporter 1 SDEL_RS07040 PF10396 GTP-binding protein TrmE N-terminus SDEL_RS07040 PF12631 MnmE helical domain SDEL_RS07040 PF01926 50S ribosome-binding GTPase SDEL_RS07050 PF02096 60Kd inner membrane protein SDEL_RS07050 PF14849 YidC periplasmic domain SDEL_RS07055 PF01809 Putative membrane protein insertion efficiency factor SDEL_RS07060 PF00468 Ribosomal protein L34 SDEL_RS07080 PF02861 Clp amino terminal domain, pathogenicity island component SDEL_RS07080 PF17871 AAA lid domain SDEL_RS07080 PF07724 AAA domain (Cdc48 subfamily) SDEL_RS07080 PF10431 C-terminal, D2-small domain, of ClpB protein SDEL_RS07080 PF00004 ATPase family associated with various cellular activities (AAA) SDEL_RS07085 PF03572 Peptidase family S41 SDEL_RS07085 PF13180 PDZ domain SDEL_RS07090 PF01259 SAICAR synthetase SDEL_RS07095 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase SDEL_RS07110 PF01553 Acyltransferase SDEL_RS07115 PF00183 Hsp90 protein SDEL_RS07120 PF04471 Restriction endonuclease SDEL_RS07120 PF14338 Mrr N-terminal domain SDEL_RS07125 PF03190 Protein of unknown function, DUF255 SDEL_RS07130 PF00580 UvrD/REP helicase N-terminal domain SDEL_RS07130 PF13361 UvrD-like helicase C-terminal domain SDEL_RS07160 PF05970 PIF1-like helicase SDEL_RS07160 PF02689 Helicase SDEL_RS07175 PF07693 KAP family P-loop domain SDEL_RS07190 PF02646 RmuC family SDEL_RS07200 PF01795 MraW methylase family SDEL_RS07205 PF00202 Aminotransferase class-III SDEL_RS07215 PF02491 SHS2 domain inserted in FTSA SDEL_RS07220 PF12327 FtsZ family, C-terminal domain SDEL_RS07220 PF00091 Tubulin/FtsZ family, GTPase domain SDEL_RS07230 PF05175 Methyltransferase small domain SDEL_RS07230 PF02390 Putative methyltransferase SDEL_RS07230 PF17827 PrmC N-terminal domain SDEL_RS07235 PF01435 Peptidase family M48 SDEL_RS07240 PF12729 Four helix bundle sensory module for signal transduction SDEL_RS07240 PF00672 HAMP domain SDEL_RS07240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SDEL_RS07245 PF00005 ABC transporter SDEL_RS07245 PF16326 ABC transporter C-terminal domain SDEL_RS07245 PF12848 ABC transporter SDEL_RS07250 PF00672 HAMP domain SDEL_RS07250 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SDEL_RS07255 PF01883 Iron-sulfur cluster assembly protein SDEL_RS07270 PF01808 AICARFT/IMPCHase bienzyme SDEL_RS07270 PF02142 MGS-like domain SDEL_RS07275 PF02600 Disulfide bond formation protein DsbB SDEL_RS07280 PF13462 Thioredoxin SDEL_RS07280 PF06965 Na+/H+ antiporter 1 SDEL_RS07285 PF03061 Thioesterase superfamily SDEL_RS07295 PF00486 Transcriptional regulatory protein, C terminal SDEL_RS07295 PF00072 Response regulator receiver domain SDEL_RS07300 PF00890 FAD binding domain SDEL_RS07300 PF14537 Cytochrome c3 SDEL_RS07315 PF00155 Aminotransferase class I and II SDEL_RS07330 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain SDEL_RS07330 PF02769 AIR synthase related protein, C-terminal domain SDEL_RS07330 PF00586 AIR synthase related protein, N-terminal domain SDEL_RS07335 PF03707 Bacterial signalling protein N terminal repeat SDEL_RS07335 PF00563 EAL domain SDEL_RS07335 PF00990 Diguanylate cyclase, GGDEF domain SDEL_RS07340 PF02416 mttA/Hcf106 family SDEL_RS07345 PF00902 Sec-independent protein translocase protein (TatC) SDEL_RS07350 PF02547 Queuosine biosynthesis protein SDEL_RS07360 PF00753 Metallo-beta-lactamase superfamily SDEL_RS07360 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain SDEL_RS07360 PF10996 Beta-Casp domain SDEL_RS07365 PF00501 AMP-binding enzyme SDEL_RS07375 PF07715 TonB-dependent Receptor Plug Domain SDEL_RS07375 PF00593 TonB dependent receptor SDEL_RS07380 PF13493 Domain of unknown function (DUF4118) SDEL_RS07380 PF13492 GAF domain SDEL_RS07380 PF00512 His Kinase A (phospho-acceptor) domain SDEL_RS07380 PF02702 Osmosensitive K+ channel His kinase sensor domain SDEL_RS07380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SDEL_RS07385 PF00072 Response regulator receiver domain SDEL_RS07385 PF00486 Transcriptional regulatory protein, C terminal SDEL_RS07390 PF02386 Cation transport protein SDEL_RS07395 PF02254 TrkA-N domain SDEL_RS07395 PF02080 TrkA-C domain SDEL_RS07400 PF01641 SelR domain SDEL_RS07405 PF00571 CBS domain SDEL_RS07405 PF03471 Transporter associated domain SDEL_RS07405 PF01595 Cyclin M transmembrane N-terminal domain SDEL_RS07415 PF12804 MobA-like NTP transferase domain SDEL_RS07420 PF13478 XdhC Rossmann domain SDEL_RS07420 PF02625 XdhC and CoxI family SDEL_RS07425 PF14535 AMP-binding enzyme C-terminal domain SDEL_RS07425 PF00501 AMP-binding enzyme SDEL_RS07430 PF04055 Radical SAM superfamily SDEL_RS07430 PF13186 Iron-sulfur cluster-binding domain SDEL_RS07450 PF01593 Flavin containing amine oxidoreductase SDEL_RS07450 PF02027 RolB/RolC glucosidase family SDEL_RS07455 PF01799 [2Fe-2S] binding domain SDEL_RS07455 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain SDEL_RS07455 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase SDEL_RS07455 PF00111 2Fe-2S iron-sulfur cluster binding domain SDEL_RS07460 PF13426 PAS domain SDEL_RS07460 PF00512 His Kinase A (phospho-acceptor) domain SDEL_RS07460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SDEL_RS07460 PF00672 HAMP domain SDEL_RS07465 PF00486 Transcriptional regulatory protein, C terminal SDEL_RS07465 PF00072 Response regulator receiver domain SDEL_RS07480 PF03824 High-affinity nickel-transport protein SDEL_RS07495 PF14437 MafB19-like deaminase SDEL_RS07515 PF02146 Sir2 family SDEL_RS07520 PF02607 B12 binding domain SDEL_RS07520 PF00809 Pterin binding enzyme SDEL_RS07520 PF02574 Homocysteine S-methyltransferase SDEL_RS07520 PF02310 B12 binding domain SDEL_RS07520 PF02965 Vitamin B12 dependent methionine synthase, activation domain SDEL_RS07530 PF13458 Periplasmic binding protein SDEL_RS07535 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SDEL_RS07535 PF00672 HAMP domain SDEL_RS07535 PF02743 Cache domain SDEL_RS07540 PF00884 Sulfatase SDEL_RS07545 PF00909 Ammonium Transporter Family SDEL_RS07550 PF00543 Nitrogen regulatory protein P-II SDEL_RS07595 PF02092 Glycyl-tRNA synthetase beta subunit SDEL_RS07610 PF00484 Carbonic anhydrase SDEL_RS07615 PF06865 Pyrimidine/purine nucleoside phosphorylase SDEL_RS07630 PF00588 SpoU rRNA Methylase family SDEL_RS07635 PF00551 Formyl transferase SDEL_RS07635 PF01842 ACT domain SDEL_RS07640 PF13735 tRNA nucleotidyltransferase domain 2 putative SDEL_RS07640 PF01743 Poly A polymerase head domain SDEL_RS07640 PF12627 Probable RNA and SrmB- binding site of polymerase A SDEL_RS07655 PF00180 Isocitrate/isopropylmalate dehydrogenase SDEL_RS07660 PF00694 Aconitase C-terminal domain SDEL_RS07685 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system SDEL_RS07695 PF01479 S4 domain SDEL_RS07695 PF00849 RNA pseudouridylate synthase SDEL_RS07700 PF00005 ABC transporter SDEL_RS07705 PF01022 Bacterial regulatory protein, arsR family SDEL_RS07710 PF02040 Arsenical pump membrane protein SDEL_RS07715 PF00174 Oxidoreductase molybdopterin binding domain SDEL_RS07720 PF01794 Ferric reductase like transmembrane component SDEL_RS07725 PF06044 Dam-replacing family SDEL_RS07725 PF17726 Dam-replacing HTH domain SDEL_RS07735 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) SDEL_RS07740 PF09962 Uncharacterized conserved protein (DUF2196) SDEL_RS07745 PF00271 Helicase conserved C-terminal domain SDEL_RS07745 PF00270 DEAD/DEAH box helicase SDEL_RS07745 PF16124 RecQ zinc-binding SDEL_RS07745 PF00570 HRDC domain SDEL_RS07745 PF09382 RQC domain SDEL_RS07760 PF00270 DEAD/DEAH box helicase SDEL_RS07760 PF00271 Helicase conserved C-terminal domain SDEL_RS07770 PF03831 PhnA domain SDEL_RS07770 PF08274 PhnA Zinc-Ribbon SDEL_RS07780 PF03591 AzlC protein SDEL_RS07785 PF00460 Flagella basal body rod protein SDEL_RS07785 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SDEL_RS07790 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SDEL_RS07790 PF00460 Flagella basal body rod protein SDEL_RS07795 PF00140 Sigma-70 factor, region 1.2 SDEL_RS07795 PF04542 Sigma-70 region 2 SDEL_RS07795 PF04539 Sigma-70 region 3 SDEL_RS07795 PF04545 Sigma-70, region 4 SDEL_RS07810 PF00210 Ferritin-like domain SDEL_RS07825 PF02421 Ferrous iron transport protein B SDEL_RS07825 PF17910 FeoB cytosolic helical domain SDEL_RS07825 PF07664 Ferrous iron transport protein B C terminus SDEL_RS07825 PF04023 FeoA domain SDEL_RS07825 PF07670 Nucleoside recognition SDEL_RS07830 PF04023 FeoA domain SDEL_RS07840 PF00005 ABC transporter SDEL_RS07845 PF00528 Binding-protein-dependent transport system inner membrane component SDEL_RS07855 PF00593 TonB dependent receptor SDEL_RS07855 PF07715 TonB-dependent Receptor Plug Domain SDEL_RS07865 PF00593 TonB dependent receptor SDEL_RS07865 PF07715 TonB-dependent Receptor Plug Domain SDEL_RS07880 PF00593 TonB dependent receptor SDEL_RS07880 PF07715 TonB-dependent Receptor Plug Domain SDEL_RS07900 PF02472 Biopolymer transport protein ExbD/TolR SDEL_RS07905 PF01618 MotA/TolQ/ExbB proton channel family SDEL_RS07910 PF07690 Major Facilitator Superfamily SDEL_RS07920 PF00005 ABC transporter SDEL_RS07920 PF00664 ABC transporter transmembrane region SDEL_RS07925 PF00005 ABC transporter SDEL_RS07925 PF00664 ABC transporter transmembrane region SDEL_RS07925 PF04954 Siderophore-interacting protein SDEL_RS07925 PF08021 Siderophore-interacting FAD-binding domain SDEL_RS07930 PF00593 TonB dependent receptor SDEL_RS07930 PF07715 TonB-dependent Receptor Plug Domain SDEL_RS07940 PF00501 AMP-binding enzyme SDEL_RS07940 PF13193 AMP-binding enzyme C-terminal domain SDEL_RS07940 PF16177 Acetyl-coenzyme A synthetase N-terminus SDEL_RS07945 PF00474 Sodium:solute symporter family SDEL_RS07950 PF04341 Protein of unknown function, DUF485 SDEL_RS07955 PF00486 Transcriptional regulatory protein, C terminal SDEL_RS07955 PF00072 Response regulator receiver domain SDEL_RS07960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SDEL_RS07965 PF04371 Porphyromonas-type peptidyl-arginine deiminase SDEL_RS07970 PF01545 Cation efflux family SDEL_RS07970 PF16916 Dimerisation domain of Zinc Transporter SDEL_RS07975 PF07670 Nucleoside recognition SDEL_RS07975 PF02421 Ferrous iron transport protein B SDEL_RS07975 PF07664 Ferrous iron transport protein B C terminus SDEL_RS07980 PF04023 FeoA domain SDEL_RS07985 PF00795 Carbon-nitrogen hydrolase SDEL_RS08000 PF00293 NUDIX domain SDEL_RS08005 PF01544 CorA-like Mg2+ transporter protein SDEL_RS08010 PF01476 LysM domain SDEL_RS08010 PF01551 Peptidase family M23 SDEL_RS08010 PF08525 Opacity-associated protein A N-terminal motif SDEL_RS08020 PF01565 FAD binding domain SDEL_RS08020 PF02913 FAD linked oxidases, C-terminal domain SDEL_RS08025 PF03631 Virulence factor BrkB SDEL_RS08035 PF03796 DnaB-like helicase C terminal domain SDEL_RS08035 PF00772 DnaB-like helicase N terminal domain SDEL_RS08040 PF04551 GcpE protein SDEL_RS08045 PF17764 3′ DNA-binding domain (3′BD) SDEL_RS08045 PF00270 DEAD/DEAH box helicase SDEL_RS08045 PF00271 Helicase conserved C-terminal domain SDEL_RS08045 PF18074 Primosomal protein N C-terminal domain SDEL_RS08045 PF18319 PriA DNA helicase Cys-rich region (CRR) domain SDEL_RS08050 PF00114 Pilin (bacterial filament) SDEL_RS08050 PF07963 Prokaryotic N-terminal methylation motif SDEL_RS08070 PF12344 Ultra-violet resistance protein B SDEL_RS08070 PF02151 UvrB/uvrC motif SDEL_RS08070 PF04851 Type III restriction enzyme, res subunit SDEL_RS08070 PF00271 Helicase conserved C-terminal domain SDEL_RS08070 PF17757 UvrB interaction domain SDEL_RS08075 PF02503 Polyphosphate kinase middle domain SDEL_RS08075 PF17941 Polyphosphate kinase C-terminal domain 1 SDEL_RS08075 PF13090 Polyphosphate kinase C-terminal domain 2 SDEL_RS08075 PF13089 Polyphosphate kinase N-terminal domain SDEL_RS08080 PF00132 Bacterial transferase hexapeptide (six repeats) SDEL_RS08085 PF02811 PHP domain SDEL_RS08085 PF00929 Exonuclease SDEL_RS08085 PF01336 OB-fold nucleic acid binding domain SDEL_RS08085 PF11490 DNA polymerase III polC-type N-terminus II SDEL_RS08085 PF07733 Bacterial DNA polymerase III alpha NTPase domain SDEL_RS08085 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SDEL_RS08085 PF14579 Helix-hairpin-helix motif SDEL_RS08090 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase SDEL_RS08095 PF00834 Ribulose-phosphate 3 epimerase family SDEL_RS08100 PF00830 Ribosomal L28 family SDEL_RS08105 PF01960 ArgJ family SDEL_RS08120 PF13277 YmdB-like protein SDEL_RS08125 PF03461 TRCF domain SDEL_RS08125 PF00271 Helicase conserved C-terminal domain SDEL_RS08125 PF02559 CarD-like/TRCF domain SDEL_RS08125 PF00270 DEAD/DEAH box helicase SDEL_RS08125 PF17757 UvrB interaction domain SDEL_RS08135 PF04225 Opacity-associated protein A LysM-like domain SDEL_RS08135 PF01551 Peptidase family M23 SDEL_RS08140 PF08245 Mur ligase middle domain SDEL_RS08145 PF00990 Diguanylate cyclase, GGDEF domain SDEL_RS08155 PF00133 tRNA synthetases class I (I, L, M and V) SDEL_RS08155 PF13603 Leucyl-tRNA synthetase, Domain 2 SDEL_RS08155 PF09334 tRNA synthetases class I (M) SDEL_RS08160 PF07549 SecD/SecF GG Motif SDEL_RS08160 PF02355 Protein export membrane protein SDEL_RS08165 PF02355 Protein export membrane protein SDEL_RS08170 PF02699 Preprotein translocase subunit SDEL_RS08180 PF02772 S-adenosylmethionine synthetase, central domain SDEL_RS08180 PF00438 S-adenosylmethionine synthetase, N-terminal domain SDEL_RS08180 PF02773 S-adenosylmethionine synthetase, C-terminal domain SDEL_RS08185 PF03588 Leucyl/phenylalanyl-tRNA protein transferase SDEL_RS08190 PF02861 Clp amino terminal domain, pathogenicity island component SDEL_RS08190 PF00004 ATPase family associated with various cellular activities (AAA) SDEL_RS08190 PF17871 AAA lid domain SDEL_RS08190 PF07724 AAA domain (Cdc48 subfamily) SDEL_RS08190 PF10431 C-terminal, D2-small domain, of ClpB protein SDEL_RS08195 PF02617 ATP-dependent Clp protease adaptor protein ClpS SDEL_RS08205 PF01668 SmpB protein SDEL_RS08210 PF00288 GHMP kinases N terminal domain SDEL_RS08215 PF02599 Global regulator protein family SDEL_RS08220 PF01509 TruB family pseudouridylate synthase (N terminal domain) SDEL_RS08225 PF00580 UvrD/REP helicase N-terminal domain SDEL_RS08225 PF13361 UvrD-like helicase C-terminal domain SDEL_RS08230 PF03466 LysR substrate binding domain SDEL_RS08230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SDEL_RS08250 PF00425 chorismate binding enzyme SDEL_RS08265 PF12833 Helix-turn-helix domain SDEL_RS08270 PF00155 Aminotransferase class I and II SDEL_RS08270 PF00392 Bacterial regulatory proteins, gntR family SDEL_RS08280 PF00109 Beta-ketoacyl synthase, N-terminal domain SDEL_RS08280 PF02801 Beta-ketoacyl synthase, C-terminal domain SDEL_RS08285 PF01245 Ribosomal protein L19 SDEL_RS08290 PF01746 tRNA (Guanine-1)-methyltransferase SDEL_RS08295 PF01782 RimM N-terminal domain SDEL_RS08305 PF00886 Ribosomal protein S16 SDEL_RS08310 PF00448 SRP54-type protein, GTPase domain SDEL_RS08310 PF02881 SRP54-type protein, helical bundle domain SDEL_RS08310 PF02978 Signal peptide binding domain SDEL_RS08315 PF00849 RNA pseudouridylate synthase SDEL_RS08320 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) SDEL_RS08320 PF02390 Putative methyltransferase SDEL_RS08330 PF01784 NIF3 (NGG1p interacting factor 3) SDEL_RS08335 PF02091 Glycyl-tRNA synthetase alpha subunit SDEL_RS08345 PF00731 AIR carboxylase SDEL_RS08350 PF01136 Peptidase family U32 SDEL_RS08360 PF02811 PHP domain SDEL_RS08365 PF00120 Glutamine synthetase, catalytic domain SDEL_RS08365 PF03951 Glutamine synthetase, beta-Grasp domain SDEL_RS08370 PF00905 Penicillin binding protein transpeptidase domain SDEL_RS08370 PF17092 Penicillin-binding protein OB-like domain SDEL_RS08370 PF00912 Transglycosylase SDEL_RS08375 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SDEL_RS08375 PF00005 ABC transporter SDEL_RS08380 PF00155 Aminotransferase class I and II SDEL_RS08385 PF02545 Maf-like protein SDEL_RS08395 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SDEL_RS08395 PF01411 tRNA synthetases class II (A) SDEL_RS08395 PF02272 DHHA1 domain SDEL_RS08410 PF00762 Ferrochelatase SDEL_RS08415 PF03717 Penicillin-binding Protein dimerisation domain SDEL_RS08415 PF00905 Penicillin binding protein transpeptidase domain SDEL_RS08420 PF02049 Flagellar hook-basal body complex protein FliE SDEL_RS08425 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SDEL_RS08425 PF00460 Flagella basal body rod protein SDEL_RS08430 PF00460 Flagella basal body rod protein SDEL_RS08435 PF01098 Cell cycle protein SDEL_RS08440 PF03033 Glycosyltransferase family 28 N-terminal domain SDEL_RS08440 PF04101 Glycosyltransferase family 28 C-terminal domain SDEL_RS08480 PF10531 SLBB domain SDEL_RS08520 PF00117 Glutamine amidotransferase class-I SDEL_RS08525 PF00672 HAMP domain SDEL_RS08525 PF00512 His Kinase A (phospho-acceptor) domain SDEL_RS08525 PF01627 Hpt domain SDEL_RS08525 PF00072 Response regulator receiver domain SDEL_RS08525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SDEL_RS08525 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) SDEL_RS08540 PF00860 Permease family SDEL_RS08545 PF04055 Radical SAM superfamily SDEL_RS08550 PF00291 Pyridoxal-phosphate dependent enzyme SDEL_RS08555 PF01966 HD domain SDEL_RS08555 PF01842 ACT domain SDEL_RS08555 PF01909 Nucleotidyltransferase domain SDEL_RS08555 PF08335 GlnD PII-uridylyltransferase SDEL_RS08560 PF01380 SIS domain SDEL_RS08595 PF00005 ABC transporter SDEL_RS08595 PF12848 ABC transporter SDEL_RS08600 PF00990 Diguanylate cyclase, GGDEF domain SDEL_RS08600 PF00563 EAL domain SDEL_RS08600 PF03707 Bacterial signalling protein N terminal repeat SDEL_RS08625 PF00899 ThiF family SDEL_RS08630 PF00072 Response regulator receiver domain SDEL_RS08630 PF00990 Diguanylate cyclase, GGDEF domain SDEL_RS08640 PF14602 Hexapeptide repeat of succinyl-transferase SDEL_RS08640 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle SDEL_RS08645 PF10609 NUBPL iron-transfer P-loop NTPase SDEL_RS08645 PF01883 Iron-sulfur cluster assembly protein SDEL_RS08650 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase SDEL_RS08650 PF02542 YgbB family SDEL_RS08655 PF00486 Transcriptional regulatory protein, C terminal SDEL_RS08655 PF00072 Response regulator receiver domain SDEL_RS08660 PF01747 ATP-sulfurylase SDEL_RS08660 PF14306 PUA-like domain SDEL_RS08665 PF04608 Phosphatidylglycerophosphatase A SDEL_RS08670 PF04264 YceI-like domain SDEL_RS08675 PF09186 Domain of unknown function (DUF1949) SDEL_RS08675 PF01205 Uncharacterized protein family UPF0029 SDEL_RS08680 PF00005 ABC transporter SDEL_RS08680 PF17912 MalK OB fold domain SDEL_RS08695 PF08402 TOBE domain SDEL_RS08695 PF00005 ABC transporter SDEL_RS08700 PF00528 Binding-protein-dependent transport system inner membrane component SDEL_RS08715 PF00768 D-alanyl-D-alanine carboxypeptidase SDEL_RS08715 PF07943 Penicillin-binding protein 5, C-terminal domain SDEL_RS08720 PF09521 NgoPII restriction endonuclease SDEL_RS08725 PF00145 C-5 cytosine-specific DNA methylase SDEL_RS08730 PF14748 Pyrroline-5-carboxylate reductase dimerisation SDEL_RS08730 PF03807 NADP oxidoreductase coenzyme F420-dependent SDEL_RS08735 PF00005 ABC transporter SDEL_RS08735 PF02687 FtsX-like permease family SDEL_RS08735 PF12704 MacB-like periplasmic core domain SDEL_RS08740 PF00005 ABC transporter SDEL_RS08745 PF00529 HlyD membrane-fusion protein of T1SS SDEL_RS08745 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SDEL_RS08750 PF02321 Outer membrane efflux protein SDEL_RS08765 PF00924 Mechanosensitive ion channel SDEL_RS08765 PF05552 Conserved TM helix SDEL_RS08785 PF01654 Cytochrome bd terminal oxidase subunit I SDEL_RS08790 PF02322 Cytochrome bd terminal oxidase subunit II SDEL_RS08795 PF17158 Membrane-associated sensor, integral membrane domain SDEL_RS08795 PF00990 Diguanylate cyclase, GGDEF domain SDEL_RS08805 PF00690 Cation transporter/ATPase, N-terminus SDEL_RS08805 PF00689 Cation transporting ATPase, C-terminus SDEL_RS08815 PF08212 Lipocalin-like domain SDEL_RS08840 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family SDEL_RS08845 PF01029 NusB family SDEL_RS08850 PF00885 6,7-dimethyl-8-ribityllumazine synthase SDEL_RS08855 PF12867 DinB superfamily SDEL_RS08855 PF03781 Sulfatase-modifying factor enzyme 1 SDEL_RS08860 PF00793 DAHP synthetase I family SDEL_RS08865 PF00892 EamA-like transporter family SDEL_RS08870 PF00924 Mechanosensitive ion channel SDEL_RS08875 PF01926 50S ribosome-binding GTPase SDEL_RS08875 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal SDEL_RS08880 PF01202 Shikimate kinase SDEL_RS08885 PF00579 tRNA synthetases class I (W and Y) SDEL_RS08890 PF02403 Seryl-tRNA synthetase N-terminal domain SDEL_RS08890 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SDEL_RS08900 PF08502 LeuA allosteric (dimerisation) domain SDEL_RS08900 PF00682 HMGL-like SDEL_RS08905 PF01066 CDP-alcohol phosphatidyltransferase SDEL_RS08910 PF02666 Phosphatidylserine decarboxylase SDEL_RS08915 PF01434 Peptidase family M41 SDEL_RS08915 PF17862 AAA+ lid domain SDEL_RS08915 PF00004 ATPase family associated with various cellular activities (AAA) SDEL_RS08925 PF00072 Response regulator receiver domain SDEL_RS08930 PF00977 Histidine biosynthesis protein SDEL_RS08935 PF00117 Glutamine amidotransferase class-I SDEL_RS08945 PF02516 Oligosaccharyl transferase STT3 subunit SDEL_RS08945 PF18527 STT3/PglB C-terminal beta-barrel domain SDEL_RS08955 PF02719 Polysaccharide biosynthesis protein SDEL_RS08960 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase SDEL_RS08965 PF00953 Glycosyl transferase family 4 SDEL_RS08970 PF01370 NAD dependent epimerase/dehydratase family SDEL_RS08975 PF00535 Glycosyl transferase family 2 SDEL_RS09000 PF00535 Glycosyl transferase family 2 SDEL_RS09015 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family SDEL_RS09025 PF00132 Bacterial transferase hexapeptide (six repeats) SDEL_RS09030 PF05523 WxcM-like, C-terminal SDEL_RS09035 PF16363 GDP-mannose 4,6 dehydratase SDEL_RS09040 PF00483 Nucleotidyl transferase SDEL_RS09050 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family SDEL_RS09055 PF01370 NAD dependent epimerase/dehydratase family SDEL_RS09060 PF16363 GDP-mannose 4,6 dehydratase SDEL_RS09065 PF01050 Mannose-6-phosphate isomerase SDEL_RS09065 PF00483 Nucleotidyl transferase SDEL_RS09070 PF01370 NAD dependent epimerase/dehydratase family SDEL_RS09075 PF16363 GDP-mannose 4,6 dehydratase SDEL_RS09085 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain SDEL_RS09085 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain SDEL_RS09090 PF14743 DNA ligase OB-like domain SDEL_RS09090 PF01068 ATP dependent DNA ligase domain SDEL_RS09095 PF16363 GDP-mannose 4,6 dehydratase SDEL_RS09100 PF00483 Nucleotidyl transferase SDEL_RS09105 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SDEL_RS09105 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SDEL_RS09105 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SDEL_RS09105 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SDEL_RS09125 PF00535 Glycosyl transferase family 2 SDEL_RS09135 PF01075 Glycosyltransferase family 9 (heptosyltransferase) SDEL_RS09150 PF01075 Glycosyltransferase family 9 (heptosyltransferase) SDEL_RS09170 PF13580 SIS domain SDEL_RS09175 PF00294 pfkB family carbohydrate kinase SDEL_RS09175 PF01467 Cytidylyltransferase-like SDEL_RS09180 PF01370 NAD dependent epimerase/dehydratase family SDEL_RS09205 PF00403 Heavy-metal-associated domain SDEL_RS09210 PF00563 EAL domain SDEL_RS09210 PF00990 Diguanylate cyclase, GGDEF domain SDEL_RS09210 PF08448 PAS fold SDEL_RS09215 PF00512 His Kinase A (phospho-acceptor) domain SDEL_RS09215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SDEL_RS09220 PF08534 Redoxin SDEL_RS09230 PF02578 Multi-copper polyphenol oxidoreductase laccase SDEL_RS09235 PF00677 Lumazine binding domain SDEL_RS09240 PF00672 HAMP domain SDEL_RS09240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SDEL_RS09245 PF02626 Carboxyltransferase domain, subdomain A and B SDEL_RS09250 PF02682 Carboxyltransferase domain, subdomain C and D SDEL_RS09255 PF03746 LamB/YcsF family SDEL_RS09260 PF13932 GidA associated domain SDEL_RS09260 PF01134 Glucose inhibited division protein A SDEL_RS09265 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal SDEL_RS09265 PF00355 Rieske [2Fe-2S] domain SDEL_RS09270 PF00033 Cytochrome b/b6/petB SDEL_RS09270 PF00032 Cytochrome b(C-terminal)/b6/petD SDEL_RS09275 PF02167 Cytochrome C1 family SDEL_RS09280 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit SDEL_RS09285 PF00109 Beta-ketoacyl synthase, N-terminal domain SDEL_RS09285 PF02801 Beta-ketoacyl synthase, C-terminal domain SDEL_RS09290 PF00550 Phosphopantetheine attachment site SDEL_RS09300 PF06415 BPG-independent PGAM N-terminus (iPGM_N) SDEL_RS09300 PF01676 Metalloenzyme superfamily SDEL_RS09305 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 SDEL_RS09305 PF00953 Glycosyl transferase family 4 SDEL_RS09310 PF08245 Mur ligase middle domain SDEL_RS09320 PF01434 Peptidase family M41 SDEL_RS09320 PF00004 ATPase family associated with various cellular activities (AAA) SDEL_RS09320 PF17862 AAA+ lid domain SDEL_RS09320 PF06480 FtsH Extracellular SDEL_RS09325 PF12792 CSS motif domain associated with EAL SDEL_RS09325 PF00563 EAL domain SDEL_RS09345 PF03649 Uncharacterised protein family (UPF0014) SDEL_RS09350 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SDEL_RS09350 PF00289 Biotin carboxylase, N-terminal domain SDEL_RS09350 PF02785 Biotin carboxylase C-terminal domain SDEL_RS09365 PF01384 Phosphate transporter family SDEL_RS09370 PF00271 Helicase conserved C-terminal domain SDEL_RS09370 PF00270 DEAD/DEAH box helicase SDEL_RS09375 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 SDEL_RS09385 PF12729 Four helix bundle sensory module for signal transduction SDEL_RS09385 PF00672 HAMP domain SDEL_RS09385 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SDEL_RS09395 PF00005 ABC transporter SDEL_RS09400 PF00528 Binding-protein-dependent transport system inner membrane component SDEL_RS09405 PF00528 Binding-protein-dependent transport system inner membrane component SDEL_RS09410 PF12849 PBP superfamily domain SDEL_RS09415 PF00672 HAMP domain SDEL_RS09415 PF12729 Four helix bundle sensory module for signal transduction SDEL_RS09415 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SDEL_RS09420 PF13247 4Fe-4S dicluster domain SDEL_RS09425 PF00361 Proton-conducting membrane transporter SDEL_RS09430 PF00146 NADH dehydrogenase SDEL_RS09435 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L SDEL_RS09440 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus SDEL_RS09440 PF00361 Proton-conducting membrane transporter SDEL_RS09445 PF00374 Nickel-dependent hydrogenase SDEL_RS09445 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit SDEL_RS09445 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit SDEL_RS09455 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit SDEL_RS09475 PF01895 PhoU domain SDEL_RS09480 PF00072 Response regulator receiver domain SDEL_RS09480 PF00486 Transcriptional regulatory protein, C terminal SDEL_RS09485 PF18698 Histidine kinase sensor domain SDEL_RS09485 PF00512 His Kinase A (phospho-acceptor) domain SDEL_RS09485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SDEL_RS09485 PF00672 HAMP domain SDEL_RS09490 PF03061 Thioesterase superfamily SDEL_RS09495 PF00989 PAS fold SDEL_RS09495 PF00512 His Kinase A (phospho-acceptor) domain SDEL_RS09495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SDEL_RS09500 PF06508 Queuosine biosynthesis protein QueC SDEL_RS09505 PF04055 Radical SAM superfamily SDEL_RS09530 PF02562 PhoH-like protein SDEL_RS09535 PF02321 Outer membrane efflux protein SDEL_RS09540 PF00873 AcrB/AcrD/AcrF family SDEL_RS09545 PF00529 HlyD membrane-fusion protein of T1SS SDEL_RS09545 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SDEL_RS09560 PF00375 Sodium:dicarboxylate symporter family SDEL_RS09565 PF02664 S-Ribosylhomocysteinase (LuxS) SDEL_RS09585 PF02635 DsrE/DsrF-like family SDEL_RS09600 PF02777 Iron/manganese superoxide dismutases, C-terminal domain SDEL_RS09600 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain SDEL_RS09605 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II SDEL_RS09605 PF10371 Domain of unknown function SDEL_RS09605 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg SDEL_RS09605 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SDEL_RS09605 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase SDEL_RS09610 PF13419 Haloacid dehalogenase-like hydrolase SDEL_RS09620 PF05736 OprF membrane domain SDEL_RS09620 PF00691 OmpA family SDEL_RS09625 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SDEL_RS09640 PF02222 ATP-grasp domain SDEL_RS09655 PF00380 Ribosomal protein S9/S16 SDEL_RS09660 PF00572 Ribosomal protein L13 SDEL_RS09665 PF12705 PD-(D/E)XK nuclease superfamily SDEL_RS09665 PF13361 UvrD-like helicase C-terminal domain SDEL_RS09665 PF00580 UvrD/REP helicase N-terminal domain SDEL_RS09690 PF13442 Cytochrome C oxidase, cbb3-type, subunit III SDEL_RS09690 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP SDEL_RS09705 PF00115 Cytochrome C and Quinol oxidase polypeptide I SDEL_RS09710 PF01627 Hpt domain SDEL_RS09710 PF00486 Transcriptional regulatory protein, C terminal SDEL_RS09710 PF00072 Response regulator receiver domain SDEL_RS09715 PF08448 PAS fold SDEL_RS09715 PF08447 PAS fold SDEL_RS09715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SDEL_RS09725 PF00117 Glutamine amidotransferase class-I SDEL_RS09725 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain SDEL_RS09745 PF00709 Adenylosuccinate synthetase SDEL_RS09750 PF13393 Histidyl-tRNA synthetase SDEL_RS09755 PF00266 Aminotransferase class-V SDEL_RS09760 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SDEL_RS09760 PF00672 HAMP domain SDEL_RS09760 PF02743 Cache domain SDEL_RS09765 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SDEL_RS09765 PF00672 HAMP domain SDEL_RS09765 PF02743 Cache domain SDEL_RS09770 PF13419 Haloacid dehalogenase-like hydrolase SDEL_RS09775 PF02779 Transketolase, pyrimidine binding domain SDEL_RS09775 PF00456 Transketolase, thiamine diphosphate binding domain SDEL_RS09775 PF02780 Transketolase, C-terminal domain SDEL_RS09780 PF00348 Polyprenyl synthetase SDEL_RS09790 PF02575 YbaB/EbfC DNA-binding family SDEL_RS09795 PF02261 Aspartate decarboxylase SDEL_RS09800 PF02875 Mur ligase family, glutamate ligase domain SDEL_RS09800 PF08245 Mur ligase middle domain SDEL_RS09815 PF01196 Ribosomal protein L17 SDEL_RS09820 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain SDEL_RS09820 PF01000 RNA polymerase Rpb3/RpoA insert domain SDEL_RS09820 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain SDEL_RS09825 PF00163 Ribosomal protein S4/S9 N-terminal domain SDEL_RS09825 PF01479 S4 domain SDEL_RS09830 PF00411 Ribosomal protein S11 SDEL_RS09835 PF00416 Ribosomal protein S13/S18 SDEL_RS09840 PF00444 Ribosomal protein L36 SDEL_RS09845 PF01176 Translation initiation factor 1A / IF-1 SDEL_RS09850 PF00557 Metallopeptidase family M24 SDEL_RS09855 PF00344 SecY translocase SDEL_RS09860 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A SDEL_RS09865 PF03719 Ribosomal protein S5, C-terminal domain SDEL_RS09865 PF00333 Ribosomal protein S5, N-terminal domain SDEL_RS09870 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast SDEL_RS09875 PF00347 Ribosomal protein L6 SDEL_RS09880 PF00410 Ribosomal protein S8 SDEL_RS09885 PF00253 Ribosomal protein S14p/S29e SDEL_RS09890 PF00281 Ribosomal protein L5 SDEL_RS09890 PF00673 ribosomal L5P family C-terminus SDEL_RS09895 PF00467 KOW motif SDEL_RS09895 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 SDEL_RS09900 PF00238 Ribosomal protein L14p/L23e SDEL_RS09905 PF00366 Ribosomal protein S17 SDEL_RS09910 PF00831 Ribosomal L29 protein SDEL_RS09915 PF00252 Ribosomal protein L16p/L10e SDEL_RS09920 PF07650 KH domain SDEL_RS09920 PF00189 Ribosomal protein S3, C-terminal domain SDEL_RS09925 PF00237 Ribosomal protein L22p/L17e SDEL_RS09930 PF00203 Ribosomal protein S19 SDEL_RS09935 PF00181 Ribosomal Proteins L2, RNA binding domain SDEL_RS09935 PF03947 Ribosomal Proteins L2, C-terminal domain SDEL_RS09940 PF00276 Ribosomal protein L23 SDEL_RS09945 PF00573 Ribosomal protein L4/L1 family SDEL_RS09950 PF00297 Ribosomal protein L3 SDEL_RS09955 PF00338 Ribosomal protein S10p/S20e SDEL_RS09965 PF01351 Ribonuclease HII SDEL_RS09975 PF07670 Nucleoside recognition SDEL_RS09975 PF07664 Ferrous iron transport protein B C terminus SDEL_RS09975 PF02421 Ferrous iron transport protein B SDEL_RS09980 PF01264 Chorismate synthase SDEL_RS09985 PF14622 Ribonuclease-III-like SDEL_RS09985 PF00035 Double-stranded RNA binding motif SDEL_RS09990 PF00075 RNase H SDEL_RS10000 PF16730 DnaG-primase C-terminal, helicase-binding domain SDEL_RS10000 PF13662 Toprim domain SDEL_RS10000 PF01807 CHC2 zinc finger SDEL_RS10000 PF08275 DNA primase catalytic core, N-terminal domain SDEL_RS10010 PF00072 Response regulator receiver domain SDEL_RS10020 PF00990 Diguanylate cyclase, GGDEF domain SDEL_RS10020 PF03707 Bacterial signalling protein N terminal repeat SDEL_RS10020 PF00563 EAL domain SDEL_RS10025 PF00486 Transcriptional regulatory protein, C terminal SDEL_RS10025 PF00072 Response regulator receiver domain SDEL_RS10030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SDEL_RS10030 PF00512 His Kinase A (phospho-acceptor) domain SDEL_RS10035 PF01339 CheB methylesterase SDEL_RS10035 PF00072 Response regulator receiver domain SDEL_RS10040 PF03975 CheD chemotactic sensory transduction SDEL_RS10045 PF00672 HAMP domain SDEL_RS10045 PF18698 Histidine kinase sensor domain SDEL_RS10045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SDEL_RS10045 PF00989 PAS fold SDEL_RS10045 PF00512 His Kinase A (phospho-acceptor) domain SDEL_RS10050 PF01739 CheR methyltransferase, SAM binding domain SDEL_RS10050 PF03705 CheR methyltransferase, all-alpha domain SDEL_RS10055 PF01584 CheW-like domain SDEL_RS10055 PF01627 Hpt domain SDEL_RS10055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SDEL_RS10055 PF02895 Signal transducing histidine kinase, homodimeric domain SDEL_RS10055 PF09078 CheY binding SDEL_RS10065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SDEL_RS10065 PF00672 HAMP domain SDEL_RS10065 PF02203 Tar ligand binding domain homologue SDEL_RS10070 PF01584 CheW-like domain SDEL_RS10075 PF00072 Response regulator receiver domain SDEL_RS10090 PF00589 Phage integrase family SDEL_RS10090 PF12167 Arm DNA-binding domain SDEL_RS10105 PF01695 IstB-like ATP binding protein SDEL_RS10110 PF02796 Helix-turn-helix domain of resolvase SDEL_RS10110 PF00665 Integrase core domain SDEL_RS10130 PF00486 Transcriptional regulatory protein, C terminal SDEL_RS10130 PF00072 Response regulator receiver domain SDEL_RS10135 PF00989 PAS fold SDEL_RS10135 PF00512 His Kinase A (phospho-acceptor) domain SDEL_RS10135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SDEL_RS10140 PF17763 Glutaminase/Asparaginase C-terminal domain SDEL_RS10140 PF00710 Asparaginase, N-terminal SDEL_RS10145 PF03605 Anaerobic c4-dicarboxylate membrane transporter SDEL_RS10150 PF10415 Fumarase C C-terminus SDEL_RS10150 PF00206 Lyase SDEL_RS10155 PF10415 Fumarase C C-terminus SDEL_RS10155 PF00206 Lyase SDEL_RS10160 PF00106 short chain dehydrogenase SDEL_RS10170 PF00145 C-5 cytosine-specific DNA methylase SDEL_RS10200 PF00005 ABC transporter SDEL_RS10205 PF12704 MacB-like periplasmic core domain SDEL_RS10205 PF02687 FtsX-like permease family SDEL_RS10220 PF01869 BadF/BadG/BcrA/BcrD ATPase family SDEL_RS10225 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component SDEL_RS10230 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SDEL_RS10230 PF13426 PAS domain SDEL_RS10230 PF08447 PAS fold SDEL_RS10235 PF00072 Response regulator receiver domain SDEL_RS10235 PF08769 Sporulation initiation factor Spo0A C terminal SDEL_RS10240 PF00512 His Kinase A (phospho-acceptor) domain SDEL_RS10240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SDEL_RS10245 PF02673 Bacitracin resistance protein BacA SDEL_RS10250 PF02001 Protein of unknown function DUF134 SDEL_RS10260 PF12792 CSS motif domain associated with EAL SDEL_RS10260 PF00563 EAL domain SDEL_RS10265 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SDEL_RS10270 PF00528 Binding-protein-dependent transport system inner membrane component SDEL_RS10275 PF00528 Binding-protein-dependent transport system inner membrane component SDEL_RS10275 PF12911 N-terminal TM domain of oligopeptide transport permease C SDEL_RS10285 PF08019 Phosphoethanolamine transferase EptA/EptB SDEL_RS10285 PF00884 Sulfatase SDEL_RS10290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SDEL_RS10290 PF00512 His Kinase A (phospho-acceptor) domain SDEL_RS10290 PF18719 ArlS sensor domain SDEL_RS10295 PF00486 Transcriptional regulatory protein, C terminal SDEL_RS10295 PF00072 Response regulator receiver domain SDEL_RS10305 PF01810 LysE type translocator SDEL_RS10310 PF01370 NAD dependent epimerase/dehydratase family SDEL_RS10310 PF08338 Domain of unknown function (DUF1731) SDEL_RS10315 PF01810 LysE type translocator SDEL_RS10325 PF00258 Flavodoxin SDEL_RS10335 PF03824 High-affinity nickel-transport protein SDEL_RS10360 PF00586 AIR synthase related protein, N-terminal domain SDEL_RS10360 PF02769 AIR synthase related protein, C-terminal domain SDEL_RS10365 PF01206 Sulfurtransferase TusA SDEL_RS10380 PF08402 TOBE domain SDEL_RS10380 PF00005 ABC transporter SDEL_RS10395 PF02634 FdhD/NarQ family SDEL_RS10410 PF00005 ABC transporter SDEL_RS10415 PF01032 FecCD transport family SDEL_RS10425 PF02472 Biopolymer transport protein ExbD/TolR SDEL_RS10430 PF01618 MotA/TolQ/ExbB proton channel family SDEL_RS10435 PF03459 TOBE domain SDEL_RS10435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SDEL_RS10440 PF01497 Periplasmic binding protein SDEL_RS10460 PF13247 4Fe-4S dicluster domain SDEL_RS10465 PF12838 4Fe-4S dicluster domain SDEL_RS10465 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SDEL_RS10465 PF00384 Molybdopterin oxidoreductase SDEL_RS10465 PF01568 Molydopterin dinucleotide binding domain SDEL_RS10465 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region SDEL_RS10470 PF00384 Molybdopterin oxidoreductase SDEL_RS10470 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SDEL_RS10470 PF01568 Molydopterin dinucleotide binding domain SDEL_RS10495 PF08448 PAS fold SDEL_RS10495 PF08447 PAS fold SDEL_RS10495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SDEL_RS10500 PF00486 Transcriptional regulatory protein, C terminal SDEL_RS10500 PF00072 Response regulator receiver domain SDEL_RS10505 PF03841 L-seryl-tRNA selenium transferase SDEL_RS10510 PF09107 Elongation factor SelB, winged helix SDEL_RS10510 PF00009 Elongation factor Tu GTP binding domain SDEL_RS10510 PF09105 Elongation factor SelB, winged helix SDEL_RS10510 PF03144 Elongation factor Tu domain 2 SDEL_RS10510 PF09106 Elongation factor SelB, winged helix SDEL_RS10515 PF04205 FMN-binding domain SDEL_RS10515 PF00890 FAD binding domain SDEL_RS10540 PF04205 FMN-binding domain SDEL_RS10540 PF00890 FAD binding domain SDEL_RS10565 PF00072 Response regulator receiver domain SDEL_RS10565 PF00486 Transcriptional regulatory protein, C terminal SDEL_RS10580 PF07977 FabA-like domain SDEL_RS10595 PF00221 Aromatic amino acid lyase SDEL_RS10630 PF00005 ABC transporter SDEL_RS10645 PF02801 Beta-ketoacyl synthase, C-terminal domain SDEL_RS10645 PF00109 Beta-ketoacyl synthase, N-terminal domain SDEL_RS10695 PF00561 alpha/beta hydrolase fold SDEL_RS10695 PF08386 TAP-like protein SDEL_RS10710 PF00109 Beta-ketoacyl synthase, N-terminal domain SDEL_RS10710 PF02801 Beta-ketoacyl synthase, C-terminal domain SDEL_RS10715 PF00550 Phosphopantetheine attachment site SDEL_RS10720 PF00270 DEAD/DEAH box helicase SDEL_RS10720 PF00271 Helicase conserved C-terminal domain SDEL_RS10730 PF02411 MerT mercuric transport protein SDEL_RS10735 PF01841 Transglutaminase-like superfamily SDEL_RS10740 PF02086 D12 class N6 adenine-specific DNA methyltransferase SDEL_RS10750 PF00072 Response regulator receiver domain SDEL_RS10750 PF00486 Transcriptional regulatory protein, C terminal SDEL_RS10770 PF07683 Cobalamin synthesis protein cobW C-terminal domain SDEL_RS10770 PF02492 CobW/HypB/UreG, nucleotide-binding domain SDEL_RS10790 PF00486 Transcriptional regulatory protein, C terminal SDEL_RS10790 PF00072 Response regulator receiver domain SDEL_RS10795 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain SDEL_RS10800 PF02743 Cache domain SDEL_RS10800 PF00672 HAMP domain SDEL_RS10800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SDEL_RS10805 PF16653 Saccharopine dehydrogenase C-terminal domain SDEL_RS10805 PF03435 Saccharopine dehydrogenase NADP binding domain SDEL_RS10810 PF01725 Ham1 family SDEL_RS10815 PF03562 MltA specific insert domain SDEL_RS10815 PF06725 3D domain SDEL_RS10820 PF07690 Major Facilitator Superfamily SDEL_RS10840 PF00994 Probable molybdopterin binding domain SDEL_RS10840 PF03454 MoeA C-terminal region (domain IV) SDEL_RS10840 PF03453 MoeA N-terminal region (domain I and II) SDEL_RS10845 PF02391 MoaE protein SDEL_RS10855 PF04324 BFD-like [2Fe-2S] binding domain SDEL_RS10855 PF01106 NifU-like domain SDEL_RS10855 PF01592 NifU-like N terminal domain SDEL_RS10860 PF00266 Aminotransferase class-V SDEL_RS10865 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SDEL_RS10865 PF18269 T3SS EscN ATPase C-terminal domain SDEL_RS10870 PF01227 GTP cyclohydrolase I SDEL_RS10875 PF05697 Bacterial trigger factor protein (TF) SDEL_RS10875 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SDEL_RS10875 PF05698 Bacterial trigger factor protein (TF) C-terminus SDEL_RS10880 PF00574 Clp protease SDEL_RS10890 PF01327 Polypeptide deformylase SDEL_RS10895 PF01078 Magnesium chelatase, subunit ChlI SDEL_RS10895 PF13335 Magnesium chelatase, subunit ChlI C-terminal SDEL_RS10900 PF03853 YjeF-related protein N-terminus SDEL_RS10900 PF01256 Carbohydrate kinase SDEL_RS10905 PF00551 Formyl transferase SDEL_RS10910 PF05690 Thiazole biosynthesis protein ThiG SDEL_RS10955 PF00520 Ion transport protein SDEL_RS10955 PF00027 Cyclic nucleotide-binding domain SDEL_RS10975 PF02687 FtsX-like permease family SDEL_RS10975 PF12704 MacB-like periplasmic core domain SDEL_RS10975 PF00005 ABC transporter SDEL_RS10990 PF00892 EamA-like transporter family SDEL_RS10995 PF00360 Phytochrome region SDEL_RS10995 PF00990 Diguanylate cyclase, GGDEF domain SDEL_RS10995 PF00563 EAL domain SDEL_RS10995 PF01590 GAF domain SDEL_RS11005 PF00990 Diguanylate cyclase, GGDEF domain SDEL_RS11025 PF01451 Low molecular weight phosphotyrosine protein phosphatase SDEL_RS11040 PF03741 Integral membrane protein TerC family SDEL_RS11045 PF02621 Menaquinone biosynthesis SDEL_RS11050 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain SDEL_RS11050 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase SDEL_RS11055 PF00583 Acetyltransferase (GNAT) family SDEL_RS11060 PF01554 MatE SDEL_RS11080 PF03949 Malic enzyme, NAD binding domain SDEL_RS11080 PF01515 Phosphate acetyl/butaryl transferase SDEL_RS11080 PF00390 Malic enzyme, N-terminal domain SDEL_RS11085 PF00749 tRNA synthetases class I (E and Q), catalytic domain SDEL_RS11090 PF00639 PPIC-type PPIASE domain SDEL_RS11090 PF09312 SurA N-terminal domain SDEL_RS11095 PF00289 Biotin carboxylase, N-terminal domain SDEL_RS11095 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SDEL_RS11095 PF02785 Biotin carboxylase C-terminal domain SDEL_RS11100 PF00364 Biotin-requiring enzyme SDEL_RS11105 PF00692 dUTPase SDEL_RS11125 PF10672 S-adenosylmethionine-dependent methyltransferase SDEL_RS11125 PF17785 PUA-like domain SDEL_RS11130 PF12146 Serine aminopeptidase, S33 SDEL_RS11140 PF00669 Bacterial flagellin N-terminal helical region SDEL_RS11140 PF00700 Bacterial flagellin C-terminal helical region SDEL_RS11140 PF07196 Flagellin hook IN motif SDEL_RS11145 PF02719 Polysaccharide biosynthesis protein SDEL_RS11150 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family SDEL_RS11155 PF02348 Cytidylyltransferase SDEL_RS11165 PF13302 Acetyltransferase (GNAT) domain SDEL_RS11170 PF08666 SAF domain SDEL_RS11170 PF03102 NeuB family SDEL_RS11180 PF01596 O-methyltransferase SDEL_RS11185 PF00733 Asparagine synthase SDEL_RS11185 PF13537 Glutamine amidotransferase domain SDEL_RS11190 PF13579 Glycosyl transferase 4-like domain SDEL_RS11190 PF00534 Glycosyl transferases group 1 SDEL_RS11195 PF08241 Methyltransferase domain SDEL_RS11205 PF08241 Methyltransferase domain SDEL_RS11215 PF16363 GDP-mannose 4,6 dehydratase SDEL_RS11225 PF06463 Molybdenum Cofactor Synthesis C SDEL_RS11225 PF04055 Radical SAM superfamily SDEL_RS11250 PF00669 Bacterial flagellin N-terminal helical region SDEL_RS11250 PF00700 Bacterial flagellin C-terminal helical region SDEL_RS11250 PF07196 Flagellin hook IN motif SDEL_RS11255 PF01131 DNA topoisomerase SDEL_RS11255 PF01396 Topoisomerase DNA binding C4 zinc finger SDEL_RS11255 PF01751 Toprim domain SDEL_RS11260 PF04055 Radical SAM superfamily SDEL_RS11260 PF06968 Biotin and Thiamin Synthesis associated domain SDEL_RS11265 PF00285 Citrate synthase, C-terminal domain SDEL_RS11280 PF00113 Enolase, C-terminal TIM barrel domain SDEL_RS11280 PF03952 Enolase, N-terminal domain SDEL_RS11285 PF00154 recA bacterial DNA recombination protein SDEL_RS11290 PF02621 Menaquinone biosynthesis SDEL_RS11295 PF01313 Bacterial export proteins, family 3 SDEL_RS11300 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain SDEL_RS11305 PF00814 Glycoprotease family SDEL_RS11315 PF00563 EAL domain SDEL_RS11315 PF03707 Bacterial signalling protein N terminal repeat SDEL_RS11315 PF00990 Diguanylate cyclase, GGDEF domain SDEL_RS11335 PF00149 Calcineurin-like phosphoesterase SDEL_RS11340 PF01235 Sodium:alanine symporter family SDEL_RS11345 PF00860 Permease family SDEL_RS11350 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase SDEL_RS11350 PF13288 DXP reductoisomerase C-terminal domain SDEL_RS11350 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain SDEL_RS11370 PF02595 Glycerate kinase family SDEL_RS11375 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain SDEL_RS11375 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain SDEL_RS11385 PF00672 HAMP domain SDEL_RS11385 PF12729 Four helix bundle sensory module for signal transduction SDEL_RS11385 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SDEL_RS11390 PF10417 C-terminal domain of 1-Cys peroxiredoxin SDEL_RS11390 PF00578 AhpC/TSA family SDEL_RS11400 PF00330 Aconitase family (aconitate hydratase) SDEL_RS11405 PF12804 MobA-like NTP transferase domain SDEL_RS11410 PF00990 Diguanylate cyclase, GGDEF domain SDEL_RS11410 PF10442 FIST C domain SDEL_RS11410 PF08495 FIST N domain SDEL_RS11410 PF00563 EAL domain SDEL_RS11420 PF02253 Phospholipase A1 SDEL_RS11425 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) SDEL_RS11430 PF01967 MoaC family SDEL_RS11480 PF01027 Inhibitor of apoptosis-promoting Bax1 SDEL_RS11505 PF13247 4Fe-4S dicluster domain SDEL_RS11510 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SDEL_RS11510 PF00384 Molybdopterin oxidoreductase SDEL_RS11510 PF01568 Molydopterin dinucleotide binding domain SDEL_RS11520 PF03840 Preprotein translocase SecG subunit SDEL_RS11530 PF01765 Ribosome recycling factor SDEL_RS11535 PF00156 Phosphoribosyl transferase domain SDEL_RS11560 PF04011 LemA family SDEL_RS11565 PF00679 Elongation factor G C-terminus SDEL_RS11565 PF00009 Elongation factor Tu GTP binding domain SDEL_RS11565 PF03144 Elongation factor Tu domain 2 SDEL_RS11575 PF13861 FlgD Tudor-like domain SDEL_RS11575 PF03963 Flagellar hook capping protein - N-terminal region SDEL_RS11575 PF13860 FlgD Ig-like domain SDEL_RS11580 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SDEL_RS11580 PF07196 Flagellin hook IN motif SDEL_RS11580 PF07559 Flagellar basal body protein FlaE SDEL_RS11580 PF00460 Flagella basal body rod protein SDEL_RS11585 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SDEL_RS11585 PF07559 Flagellar basal body protein FlaE SDEL_RS11585 PF07196 Flagellin hook IN motif SDEL_RS11585 PF00460 Flagella basal body rod protein SDEL_RS11595 PF00563 EAL domain SDEL_RS11595 PF00990 Diguanylate cyclase, GGDEF domain SDEL_RS11595 PF08447 PAS fold SDEL_RS11595 PF08448 PAS fold SDEL_RS11605 PF00990 Diguanylate cyclase, GGDEF domain SDEL_RS11605 PF08448 PAS fold SDEL_RS11610 PF00512 His Kinase A (phospho-acceptor) domain SDEL_RS11610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SDEL_RS11610 PF18698 Histidine kinase sensor domain SDEL_RS11610 PF00672 HAMP domain SDEL_RS11640 PF00672 HAMP domain SDEL_RS11640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SDEL_RS11640 PF00512 His Kinase A (phospho-acceptor) domain SDEL_RS11640 PF01627 Hpt domain SDEL_RS11640 PF00072 Response regulator receiver domain SDEL_RS11640 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) SDEL_RS11650 PF06594 Haemolysin-type calcium binding protein related domain SDEL_RS11650 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) SDEL_RS11655 PF06594 Haemolysin-type calcium binding protein related domain SDEL_RS11655 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) SDEL_RS11660 PF06594 Haemolysin-type calcium binding protein related domain SDEL_RS11660 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) SDEL_RS11690 PF00512 His Kinase A (phospho-acceptor) domain SDEL_RS11690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SDEL_RS11715 PF07669 Eco57I restriction-modification methylase SDEL_RS11715 PF12950 TaqI-like C-terminal specificity domain SDEL_RS11720 PF00114 Pilin (bacterial filament) SDEL_RS11720 PF07963 Prokaryotic N-terminal methylation motif SDEL_RS11725 PF01531 Glycosyl transferase family 11 SDEL_RS11730 PF08448 PAS fold SDEL_RS11730 PF08447 PAS fold SDEL_RS11730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SDEL_RS11735 PF03707 Bacterial signalling protein N terminal repeat SDEL_RS11735 PF00990 Diguanylate cyclase, GGDEF domain SDEL_RS11735 PF00563 EAL domain