SHALO_RS00025	PWY-6700	queuosine biosynthesis
SHALO_RS00435	PWY-5101	L-isoleucine biosynthesis II
SHALO_RS00435	PWY-5103	L-isoleucine biosynthesis III
SHALO_RS00435	PWY-5104	L-isoleucine biosynthesis IV
SHALO_RS00435	PWY-7111	pyruvate fermentation to isobutanol (engineered)
SHALO_RS00455	PWY-3801	sucrose degradation II (sucrose synthase)
SHALO_RS00455	PWY-6527	stachyose degradation
SHALO_RS00455	PWY-7238	sucrose biosynthesis II
SHALO_RS00455	PWY-7343	UDP-glucose biosynthesis
SHALO_RS00460	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
SHALO_RS00460	PWY-7177	UTP and CTP dephosphorylation II
SHALO_RS00460	PWY-7185	UTP and CTP dephosphorylation I
SHALO_RS00480	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
SHALO_RS00480	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
SHALO_RS00480	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
SHALO_RS00480	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
SHALO_RS00480	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
SHALO_RS00480	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
SHALO_RS00480	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
SHALO_RS00480	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
SHALO_RS00495	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
SHALO_RS00495	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
SHALO_RS00495	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
SHALO_RS00500	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
SHALO_RS00500	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
SHALO_RS00505	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
SHALO_RS00505	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
SHALO_RS00505	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
SHALO_RS00505	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
SHALO_RS00505	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
SHALO_RS00505	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
SHALO_RS00505	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
SHALO_RS00505	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
SHALO_RS00510	PWY-6123	inosine-5'-phosphate biosynthesis I
SHALO_RS00510	PWY-6124	inosine-5'-phosphate biosynthesis II
SHALO_RS00510	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
SHALO_RS00510	PWY-7234	inosine-5'-phosphate biosynthesis III
SHALO_RS00525	PWY-2201	folate transformations I
SHALO_RS00580	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
SHALO_RS00580	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
SHALO_RS00580	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
SHALO_RS00590	PWY-2941	L-lysine biosynthesis II
SHALO_RS00590	PWY-5097	L-lysine biosynthesis VI
SHALO_RS00620	PWY-6749	CMP-legionaminate biosynthesis I
SHALO_RS00695	PWY-7039	phosphatidate metabolism, as a signaling molecule
SHALO_RS00700	PWY-6728	methylaspartate cycle
SHALO_RS00700	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
SHALO_RS00700	PWY-7118	chitin degradation to ethanol
SHALO_RS00700	PWY-7294	xylose degradation IV
SHALO_RS00700	PWY-7295	L-arabinose degradation IV
SHALO_RS00830	PWY-5686	UMP biosynthesis
SHALO_RS01005	PWY-2781	<i>cis</i>-zeatin biosynthesis
SHALO_RS01035	PWY-6823	molybdenum cofactor biosynthesis
SHALO_RS01040	PWY-6823	molybdenum cofactor biosynthesis
SHALO_RS01050	PWY-2201	folate transformations I
SHALO_RS01060	PWY-2201	folate transformations I
SHALO_RS01105	PWY-2941	L-lysine biosynthesis II
SHALO_RS01105	PWY-2942	L-lysine biosynthesis III
SHALO_RS01105	PWY-5097	L-lysine biosynthesis VI
SHALO_RS01110	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
SHALO_RS01110	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
SHALO_RS01110	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
SHALO_RS01110	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
SHALO_RS01140	PWY-5057	L-valine degradation II
SHALO_RS01140	PWY-5076	L-leucine degradation III
SHALO_RS01140	PWY-5078	L-isoleucine degradation II
SHALO_RS01140	PWY-5101	L-isoleucine biosynthesis II
SHALO_RS01140	PWY-5103	L-isoleucine biosynthesis III
SHALO_RS01140	PWY-5104	L-isoleucine biosynthesis IV
SHALO_RS01140	PWY-5108	L-isoleucine biosynthesis V
SHALO_RS01165	PWY-5971	palmitate biosynthesis II (bacteria and plants)
SHALO_RS01165	PWY-5973	<i>cis</i>-vaccenate biosynthesis
SHALO_RS01165	PWY-5989	stearate biosynthesis II (bacteria and plants)
SHALO_RS01165	PWY-5994	palmitate biosynthesis I (animals and fungi)
SHALO_RS01165	PWY-6113	superpathway of mycolate biosynthesis
SHALO_RS01165	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
SHALO_RS01165	PWY-6519	8-amino-7-oxononanoate biosynthesis I
SHALO_RS01165	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
SHALO_RS01165	PWY-7663	gondoate biosynthesis (anaerobic)
SHALO_RS01165	PWY-7664	oleate biosynthesis IV (anaerobic)
SHALO_RS01165	PWYG-321	mycolate biosynthesis
SHALO_RS01190	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
SHALO_RS01190	PWY-5686	UMP biosynthesis
SHALO_RS01190	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
SHALO_RS01225	PWY-5381	pyridine nucleotide cycling (plants)
SHALO_RS01225	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
SHALO_RS01225	PWY-6596	adenosine nucleotides degradation I
SHALO_RS01225	PWY-6606	guanosine nucleotides degradation II
SHALO_RS01225	PWY-6607	guanosine nucleotides degradation I
SHALO_RS01225	PWY-6608	guanosine nucleotides degradation III
SHALO_RS01225	PWY-7185	UTP and CTP dephosphorylation I
SHALO_RS01230	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
SHALO_RS01230	PWY-622	starch biosynthesis
SHALO_RS01240	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
SHALO_RS01240	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
SHALO_RS01265	PWY-2201	folate transformations I
SHALO_RS01265	PWY-3841	folate transformations II
SHALO_RS01275	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
SHALO_RS01275	PWY-5723	Rubisco shunt
SHALO_RS01290	PWY-6308	L-cysteine biosynthesis II (tRNA-dependent)
SHALO_RS01300	PWY-2941	L-lysine biosynthesis II
SHALO_RS01300	PWY-2942	L-lysine biosynthesis III
SHALO_RS01300	PWY-5097	L-lysine biosynthesis VI
SHALO_RS01305	PWY-3461	L-tyrosine biosynthesis II
SHALO_RS01305	PWY-3462	L-phenylalanine biosynthesis II
SHALO_RS01305	PWY-6120	L-tyrosine biosynthesis III
SHALO_RS01305	PWY-6627	salinosporamide A biosynthesis
SHALO_RS01305	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
SHALO_RS01305	PWY-7626	bacilysin biosynthesis
SHALO_RS01345	PWY-6891	thiazole biosynthesis II (Bacillus)
SHALO_RS01345	PWY-6892	thiazole biosynthesis I (E. coli)
SHALO_RS01345	PWY-7560	methylerythritol phosphate pathway II
SHALO_RS01370	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
SHALO_RS01370	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
SHALO_RS01370	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
SHALO_RS01370	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
SHALO_RS01370	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
SHALO_RS01370	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
SHALO_RS01370	PWY-7205	CMP phosphorylation
SHALO_RS01370	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
SHALO_RS01370	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
SHALO_RS01370	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
SHALO_RS01370	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
SHALO_RS01370	PWY-7224	purine deoxyribonucleosides salvage
SHALO_RS01370	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
SHALO_RS01370	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
SHALO_RS01390	PWY-4381	fatty acid biosynthesis initiation I
SHALO_RS01395	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
SHALO_RS01425	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
SHALO_RS01425	PWY-6148	tetrahydromethanopterin biosynthesis
SHALO_RS01425	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
SHALO_RS01425	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
SHALO_RS01435	PWY-5316	nicotine biosynthesis
SHALO_RS01435	PWY-7342	superpathway of nicotine biosynthesis
SHALO_RS01440	PWY-5316	nicotine biosynthesis
SHALO_RS01440	PWY-5381	pyridine nucleotide cycling (plants)
SHALO_RS01440	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
SHALO_RS01440	PWY-7342	superpathway of nicotine biosynthesis
SHALO_RS01465	PWY-2201	folate transformations I
SHALO_RS01465	PWY-5497	purine nucleobases degradation II (anaerobic)
SHALO_RS01475	PWY-702	L-methionine biosynthesis II
SHALO_RS01500	PWY-5525	D-glucuronate degradation I
SHALO_RS01535	PWY-5674	nitrate reduction IV (dissimilatory)
SHALO_RS01630	PWY-5839	menaquinol-7 biosynthesis
SHALO_RS01630	PWY-5844	menaquinol-9 biosynthesis
SHALO_RS01630	PWY-5849	menaquinol-6 biosynthesis
SHALO_RS01630	PWY-5890	menaquinol-10 biosynthesis
SHALO_RS01630	PWY-5891	menaquinol-11 biosynthesis
SHALO_RS01630	PWY-5892	menaquinol-12 biosynthesis
SHALO_RS01630	PWY-5895	menaquinol-13 biosynthesis
SHALO_RS01655	PWY-6610	adenine and adenosine salvage IV
SHALO_RS01670	PWY-6167	flavin biosynthesis II (archaea)
SHALO_RS01670	PWY-6168	flavin biosynthesis III (fungi)
SHALO_RS01905	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
SHALO_RS01905	PWY-6416	quinate degradation II
SHALO_RS01905	PWY-6707	gallate biosynthesis
SHALO_RS01915	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
SHALO_RS01915	PWY-6148	tetrahydromethanopterin biosynthesis
SHALO_RS01915	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
SHALO_RS01915	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
SHALO_RS01970	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
SHALO_RS02035	PWY-2941	L-lysine biosynthesis II
SHALO_RS02035	PWY-2942	L-lysine biosynthesis III
SHALO_RS02035	PWY-5097	L-lysine biosynthesis VI
SHALO_RS02035	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
SHALO_RS02035	PWY-6559	spermidine biosynthesis II
SHALO_RS02035	PWY-6562	norspermidine biosynthesis
SHALO_RS02035	PWY-7153	grixazone biosynthesis
SHALO_RS02035	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
SHALO_RS02045	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
SHALO_RS02045	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
SHALO_RS02360	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
SHALO_RS02360	PWY-6853	ethylene biosynthesis II (microbes)
SHALO_RS02360	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
SHALO_RS02625	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
SHALO_RS02650	PWY-6854	ethylene biosynthesis III (microbes)
SHALO_RS02665	PWY-6168	flavin biosynthesis III (fungi)
SHALO_RS02665	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
SHALO_RS02670	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
SHALO_RS02670	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
SHALO_RS02675	PWY-4981	L-proline biosynthesis II (from arginine)
SHALO_RS02675	PWY-4984	urea cycle
SHALO_RS02675	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
SHALO_RS02755	PWY-3781	aerobic respiration I (cytochrome c)
SHALO_RS02755	PWY-4302	aerobic respiration III (alternative oxidase pathway)
SHALO_RS02755	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
SHALO_RS02755	PWY-5690	TCA cycle II (plants and fungi)
SHALO_RS02755	PWY-6728	methylaspartate cycle
SHALO_RS02755	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
SHALO_RS02755	PWY-7254	TCA cycle VII (acetate-producers)
SHALO_RS02755	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
SHALO_RS02760	PWY-3781	aerobic respiration I (cytochrome c)
SHALO_RS02760	PWY-4302	aerobic respiration III (alternative oxidase pathway)
SHALO_RS02760	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
SHALO_RS02760	PWY-5690	TCA cycle II (plants and fungi)
SHALO_RS02760	PWY-6728	methylaspartate cycle
SHALO_RS02760	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
SHALO_RS02760	PWY-7254	TCA cycle VII (acetate-producers)
SHALO_RS02760	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
SHALO_RS02790	PWY-6654	phosphopantothenate biosynthesis III
SHALO_RS02840	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
SHALO_RS02885	PWY-5381	pyridine nucleotide cycling (plants)
SHALO_RS02885	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
SHALO_RS02890	PWY-1042	glycolysis IV (plant cytosol)
SHALO_RS02890	PWY-5484	glycolysis II (from fructose 6-phosphate)
SHALO_RS02890	PWY-6901	superpathway of glucose and xylose degradation
SHALO_RS02890	PWY-7003	glycerol degradation to butanol
SHALO_RS02895	PWY-1042	glycolysis IV (plant cytosol)
SHALO_RS02895	PWY-5484	glycolysis II (from fructose 6-phosphate)
SHALO_RS02895	PWY-6886	1-butanol autotrophic biosynthesis
SHALO_RS02895	PWY-6901	superpathway of glucose and xylose degradation
SHALO_RS02895	PWY-7003	glycerol degradation to butanol
SHALO_RS02900	PWY-1042	glycolysis IV (plant cytosol)
SHALO_RS02900	PWY-5484	glycolysis II (from fructose 6-phosphate)
SHALO_RS02900	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
SHALO_RS02900	PWY-7003	glycerol degradation to butanol
SHALO_RS02905	PWY-5971	palmitate biosynthesis II (bacteria and plants)
SHALO_RS02905	PWY-5973	<i>cis</i>-vaccenate biosynthesis
SHALO_RS02905	PWY-5989	stearate biosynthesis II (bacteria and plants)
SHALO_RS02905	PWY-6113	superpathway of mycolate biosynthesis
SHALO_RS02905	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
SHALO_RS02905	PWY-6519	8-amino-7-oxononanoate biosynthesis I
SHALO_RS02905	PWY-7663	gondoate biosynthesis (anaerobic)
SHALO_RS02905	PWY-7664	oleate biosynthesis IV (anaerobic)
SHALO_RS02905	PWYG-321	mycolate biosynthesis
SHALO_RS02995	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
SHALO_RS03280	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
SHALO_RS03285	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
SHALO_RS03285	PWY-6596	adenosine nucleotides degradation I
SHALO_RS03285	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
SHALO_RS03290	PWY-5344	L-homocysteine biosynthesis
SHALO_RS03315	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
SHALO_RS03315	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
SHALO_RS03340	PWY-7254	TCA cycle VII (acetate-producers)
SHALO_RS03370	PWY-1042	glycolysis IV (plant cytosol)
SHALO_RS03370	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
SHALO_RS03370	PWY-5484	glycolysis II (from fructose 6-phosphate)
SHALO_RS03370	PWY-5723	Rubisco shunt
SHALO_RS03370	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
SHALO_RS03370	PWY-6886	1-butanol autotrophic biosynthesis
SHALO_RS03370	PWY-6901	superpathway of glucose and xylose degradation
SHALO_RS03370	PWY-7003	glycerol degradation to butanol
SHALO_RS03370	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
SHALO_RS03370	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
SHALO_RS03390	PWY-3341	L-proline biosynthesis III
SHALO_RS03390	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
SHALO_RS03430	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
SHALO_RS03440	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
SHALO_RS03490	PWY-4381	fatty acid biosynthesis initiation I
SHALO_RS03490	PWY-6799	fatty acid biosynthesis (plant mitochondria)
SHALO_RS03490	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
SHALO_RS03495	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
SHALO_RS03495	PWY-6153	autoinducer AI-2 biosynthesis I
SHALO_RS03495	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
SHALO_RS03525	PWY-4381	fatty acid biosynthesis initiation I
SHALO_RS03525	PWY-5743	3-hydroxypropanoate cycle
SHALO_RS03525	PWY-5744	glyoxylate assimilation
SHALO_RS03525	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
SHALO_RS03525	PWY-6679	jadomycin biosynthesis
SHALO_RS03525	PWY-6722	candicidin biosynthesis
SHALO_RS03525	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
SHALO_RS03530	PWY-6825	phosphatidylcholine biosynthesis V
SHALO_RS03590	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
SHALO_RS03590	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
SHALO_RS03610	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
SHALO_RS03730	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
SHALO_RS03735	PWY-5958	acridone alkaloid biosynthesis
SHALO_RS03735	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
SHALO_RS03735	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
SHALO_RS03750	PWY-1622	formaldehyde assimilation I (serine pathway)
SHALO_RS03750	PWY-181	photorespiration
SHALO_RS03750	PWY-2161	folate polyglutamylation
SHALO_RS03750	PWY-2201	folate transformations I
SHALO_RS03750	PWY-3661	glycine betaine degradation I
SHALO_RS03750	PWY-3661-1	glycine betaine degradation II (mammalian)
SHALO_RS03750	PWY-3841	folate transformations II
SHALO_RS03750	PWY-5497	purine nucleobases degradation II (anaerobic)
SHALO_RS03800	PWY-3961	phosphopantothenate biosynthesis II
SHALO_RS03840	PWY-5316	nicotine biosynthesis
SHALO_RS03840	PWY-7342	superpathway of nicotine biosynthesis
SHALO_RS03850	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
SHALO_RS03855	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
SHALO_RS03855	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
SHALO_RS03860	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
SHALO_RS03860	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
SHALO_RS03860	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
SHALO_RS03990	PWY-6339	syringate degradation
SHALO_RS04000	PWY-6339	syringate degradation
SHALO_RS04005	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
SHALO_RS04005	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
SHALO_RS04010	PWY-4983	L-citrulline-nitric oxide cycle
SHALO_RS04010	PWY-4984	urea cycle
SHALO_RS04010	PWY-5	canavanine biosynthesis
SHALO_RS04010	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
SHALO_RS04010	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
SHALO_RS04030	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
SHALO_RS04290	PWY-723	alkylnitronates degradation
SHALO_RS04305	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
SHALO_RS04325	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
SHALO_RS04325	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
SHALO_RS04325	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
SHALO_RS04365	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
SHALO_RS04365	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
SHALO_RS04425	PWY-5484	glycolysis II (from fructose 6-phosphate)
SHALO_RS04450	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
SHALO_RS04455	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
SHALO_RS04515	PWY-3781	aerobic respiration I (cytochrome c)
SHALO_RS04515	PWY-4302	aerobic respiration III (alternative oxidase pathway)
SHALO_RS04515	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
SHALO_RS04515	PWY-5690	TCA cycle II (plants and fungi)
SHALO_RS04515	PWY-6728	methylaspartate cycle
SHALO_RS04515	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
SHALO_RS04515	PWY-7254	TCA cycle VII (acetate-producers)
SHALO_RS04515	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
SHALO_RS04520	PWY-3781	aerobic respiration I (cytochrome c)
SHALO_RS04520	PWY-4302	aerobic respiration III (alternative oxidase pathway)
SHALO_RS04520	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
SHALO_RS04520	PWY-5690	TCA cycle II (plants and fungi)
SHALO_RS04520	PWY-6728	methylaspartate cycle
SHALO_RS04520	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
SHALO_RS04520	PWY-7254	TCA cycle VII (acetate-producers)
SHALO_RS04520	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
SHALO_RS04555	PWY-5674	nitrate reduction IV (dissimilatory)
SHALO_RS04685	PWY-5381	pyridine nucleotide cycling (plants)
SHALO_RS04745	PWY-3781	aerobic respiration I (cytochrome c)
SHALO_RS04745	PWY-4521	arsenite oxidation I (respiratory)
SHALO_RS04745	PWY-6692	Fe(II) oxidation
SHALO_RS04745	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
SHALO_RS04920	PWY-5669	phosphatidylethanolamine biosynthesis I
SHALO_RS04950	PWY-6871	3-methylbutanol biosynthesis
SHALO_RS05370	PWY-1622	formaldehyde assimilation I (serine pathway)
SHALO_RS05370	PWY-181	photorespiration
SHALO_RS05370	PWY-2161	folate polyglutamylation
SHALO_RS05370	PWY-2201	folate transformations I
SHALO_RS05370	PWY-3661	glycine betaine degradation I
SHALO_RS05370	PWY-3661-1	glycine betaine degradation II (mammalian)
SHALO_RS05370	PWY-3841	folate transformations II
SHALO_RS05370	PWY-5497	purine nucleobases degradation II (anaerobic)
SHALO_RS05405	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
SHALO_RS05405	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
SHALO_RS05405	PWY-6897	thiamin salvage II
SHALO_RS05405	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
SHALO_RS05405	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
SHALO_RS05405	PWY-7356	thiamin salvage IV (yeast)
SHALO_RS05405	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
SHALO_RS05480	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
SHALO_RS05480	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
SHALO_RS05480	PWY-6936	seleno-amino acid biosynthesis
SHALO_RS05480	PWY-702	L-methionine biosynthesis II
SHALO_RS05535	PWY-6605	adenine and adenosine salvage II
SHALO_RS05535	PWY-6610	adenine and adenosine salvage IV
SHALO_RS05560	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
SHALO_RS05560	PWY-2201	folate transformations I
SHALO_RS05560	PWY-3841	folate transformations II
SHALO_RS05560	PWY-5030	L-histidine degradation III
SHALO_RS05560	PWY-5497	purine nucleobases degradation II (anaerobic)
SHALO_RS05560	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
SHALO_RS05570	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
SHALO_RS05585	PWY-5198	factor 420 biosynthesis
SHALO_RS05585	PWY-7371	1,4-dihydroxy-6-naphthoate biosynthesis II
SHALO_RS05585	PWY-7374	1,4-dihydroxy-6-naphthoate biosynthesis I
SHALO_RS05670	PWY-5103	L-isoleucine biosynthesis III
SHALO_RS05670	PWY-7111	pyruvate fermentation to isobutanol (engineered)
SHALO_RS05745	PWY-6012	acyl carrier protein metabolism I
SHALO_RS05745	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
SHALO_RS05910	PWY-6167	flavin biosynthesis II (archaea)
SHALO_RS05910	PWY-6168	flavin biosynthesis III (fungi)
SHALO_RS05910	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
SHALO_RS05940	PWY-3781	aerobic respiration I (cytochrome c)
SHALO_RS05940	PWY-4521	arsenite oxidation I (respiratory)
SHALO_RS05940	PWY-6692	Fe(II) oxidation
SHALO_RS05940	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
SHALO_RS06020	PWY-3081	L-lysine biosynthesis V
SHALO_RS06020	PWY-6871	3-methylbutanol biosynthesis
SHALO_RS06020	PWY-7710	SHALO_RS06020
SHALO_RS06025	PWY-6823	molybdenum cofactor biosynthesis
SHALO_RS06305	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
SHALO_RS06305	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
SHALO_RS06435	PWY-7165	L-ascorbate biosynthesis VI (engineered pathway)
SHALO_RS06685	PWY-6910	hydroxymethylpyrimidine salvage
SHALO_RS06685	PWY-7356	thiamin salvage IV (yeast)
SHALO_RS06685	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
SHALO_RS06695	PWY-6897	thiamin salvage II
SHALO_RS06695	PWY-7356	thiamin salvage IV (yeast)
SHALO_RS06695	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
SHALO_RS06815	PWY-1341	phenylacetate degradation II (anaerobic)
SHALO_RS06815	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
SHALO_RS06815	PWY-7716	SHALO_RS06815
SHALO_RS06825	PWY-1341	phenylacetate degradation II (anaerobic)
SHALO_RS06825	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
SHALO_RS06825	PWY-7716	SHALO_RS06825
SHALO_RS06870	PWY-6825	phosphatidylcholine biosynthesis V
SHALO_RS06930	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
SHALO_RS06930	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
SHALO_RS06930	PWY-6897	thiamin salvage II
SHALO_RS06930	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
SHALO_RS06930	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
SHALO_RS06930	PWY-7356	thiamin salvage IV (yeast)
SHALO_RS06930	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
SHALO_RS06940	PWY-5667	CDP-diacylglycerol biosynthesis I
SHALO_RS06940	PWY-5981	CDP-diacylglycerol biosynthesis III
SHALO_RS06950	PWY-5704	urea degradation II
SHALO_RS06980	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
SHALO_RS06980	PWY-5667	CDP-diacylglycerol biosynthesis I
SHALO_RS06980	PWY-6453	stigma estolide biosynthesis
SHALO_RS06980	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
SHALO_RS06980	PWY-7587	oleate biosynthesis III (cyanobacteria)
SHALO_RS07025	PWY-3801	sucrose degradation II (sucrose synthase)
SHALO_RS07025	PWY-5054	sorbitol biosynthesis I
SHALO_RS07025	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
SHALO_RS07025	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
SHALO_RS07025	PWY-5659	GDP-mannose biosynthesis
SHALO_RS07025	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
SHALO_RS07025	PWY-621	sucrose degradation III (sucrose invertase)
SHALO_RS07025	PWY-622	starch biosynthesis
SHALO_RS07025	PWY-6981	chitin biosynthesis
SHALO_RS07025	PWY-6992	1,5-anhydrofructose degradation
SHALO_RS07025	PWY-7238	sucrose biosynthesis II
SHALO_RS07025	PWY-7347	sucrose biosynthesis III
SHALO_RS07025	PWY-7385	1,3-propanediol biosynthesis (engineered)
SHALO_RS07145	PWY-5913	TCA cycle VI (obligate autotrophs)
SHALO_RS07145	PWY-6549	L-glutamine biosynthesis III
SHALO_RS07145	PWY-6728	methylaspartate cycle
SHALO_RS07145	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
SHALO_RS07145	PWY-7124	ethylene biosynthesis V (engineered)
SHALO_RS07145	PWY-7254	TCA cycle VII (acetate-producers)
SHALO_RS07145	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
SHALO_RS07150	PWY-1622	formaldehyde assimilation I (serine pathway)
SHALO_RS07150	PWY-5392	reductive TCA cycle II
SHALO_RS07150	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
SHALO_RS07150	PWY-5690	TCA cycle II (plants and fungi)
SHALO_RS07150	PWY-5913	TCA cycle VI (obligate autotrophs)
SHALO_RS07150	PWY-6728	methylaspartate cycle
SHALO_RS07150	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
SHALO_RS07150	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
SHALO_RS07150	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
SHALO_RS07155	PWY-5392	reductive TCA cycle II
SHALO_RS07155	PWY-5537	pyruvate fermentation to acetate V
SHALO_RS07155	PWY-5538	pyruvate fermentation to acetate VI
SHALO_RS07155	PWY-5690	TCA cycle II (plants and fungi)
SHALO_RS07155	PWY-5913	TCA cycle VI (obligate autotrophs)
SHALO_RS07155	PWY-6728	methylaspartate cycle
SHALO_RS07155	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
SHALO_RS07155	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
SHALO_RS07160	PWY-5392	reductive TCA cycle II
SHALO_RS07160	PWY-5537	pyruvate fermentation to acetate V
SHALO_RS07160	PWY-5538	pyruvate fermentation to acetate VI
SHALO_RS07160	PWY-5690	TCA cycle II (plants and fungi)
SHALO_RS07160	PWY-5913	TCA cycle VI (obligate autotrophs)
SHALO_RS07160	PWY-6728	methylaspartate cycle
SHALO_RS07160	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
SHALO_RS07160	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
SHALO_RS07200	PWY-5392	reductive TCA cycle II
SHALO_RS07200	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
SHALO_RS07200	PWY-5690	TCA cycle II (plants and fungi)
SHALO_RS07200	PWY-5913	TCA cycle VI (obligate autotrophs)
SHALO_RS07200	PWY-6728	methylaspartate cycle
SHALO_RS07200	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
SHALO_RS07200	PWY-7254	TCA cycle VII (acetate-producers)
SHALO_RS07200	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
SHALO_RS07230	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
SHALO_RS07240	PWY-5269	cardiolipin biosynthesis II
SHALO_RS07240	PWY-5668	cardiolipin biosynthesis I
SHALO_RS07250	PWY-2941	L-lysine biosynthesis II
SHALO_RS07250	PWY-2942	L-lysine biosynthesis III
SHALO_RS07250	PWY-5097	L-lysine biosynthesis VI
SHALO_RS07260	PWY-5686	UMP biosynthesis
SHALO_RS07290	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
SHALO_RS07290	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
SHALO_RS07315	PWY-1281	sulfoacetaldehyde degradation I
SHALO_RS07315	PWY-5482	pyruvate fermentation to acetate II
SHALO_RS07315	PWY-5485	pyruvate fermentation to acetate IV
SHALO_RS07315	PWY-5497	purine nucleobases degradation II (anaerobic)
SHALO_RS07315	PWY-6637	sulfolactate degradation II
SHALO_RS07320	PWY-5482	pyruvate fermentation to acetate II
SHALO_RS07320	PWY-5485	pyruvate fermentation to acetate IV
SHALO_RS07320	PWY-5497	purine nucleobases degradation II (anaerobic)
SHALO_RS07405	PWY-4983	L-citrulline-nitric oxide cycle
SHALO_RS07405	PWY-4984	urea cycle
SHALO_RS07405	PWY-5	canavanine biosynthesis
SHALO_RS07405	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
SHALO_RS07405	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
SHALO_RS07510	PWY-6168	flavin biosynthesis III (fungi)
SHALO_RS07510	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
SHALO_RS07515	PWY-6167	flavin biosynthesis II (archaea)
SHALO_RS07515	PWY-6168	flavin biosynthesis III (fungi)
SHALO_RS07515	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
SHALO_RS07520	PWY-6167	flavin biosynthesis II (archaea)
SHALO_RS07520	PWY-6168	flavin biosynthesis III (fungi)
SHALO_RS07600	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
SHALO_RS07600	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
SHALO_RS07600	PWY-6269	adenosylcobalamin salvage from cobinamide II
SHALO_RS07610	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
SHALO_RS07610	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
SHALO_RS07610	PWY-6269	adenosylcobalamin salvage from cobinamide II
SHALO_RS07620	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
SHALO_RS07620	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
SHALO_RS07620	PWY-6269	adenosylcobalamin salvage from cobinamide II
SHALO_RS07630	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
SHALO_RS07655	PWY-2201	folate transformations I
SHALO_RS07655	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
SHALO_RS07665	PWY-2201	folate transformations I
SHALO_RS07665	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
SHALO_RS07675	PWY-5194	siroheme biosynthesis
SHALO_RS07675	PWY-5441	S-methyl-L-methionine cycle
SHALO_RS07675	PWY-702	L-methionine biosynthesis II
SHALO_RS07675	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
SHALO_RS07680	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
SHALO_RS07685	PWY-5194	siroheme biosynthesis
SHALO_RS07685	PWY-5441	S-methyl-L-methionine cycle
SHALO_RS07685	PWY-702	L-methionine biosynthesis II
SHALO_RS07685	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
SHALO_RS07690	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
SHALO_RS07690	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
SHALO_RS07690	PWY-5194	siroheme biosynthesis
SHALO_RS07690	PWY-5441	S-methyl-L-methionine cycle
SHALO_RS07690	PWY-702	L-methionine biosynthesis II
SHALO_RS07690	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
SHALO_RS07715	PWY-5194	siroheme biosynthesis
SHALO_RS07715	PWY-5441	S-methyl-L-methionine cycle
SHALO_RS07715	PWY-702	L-methionine biosynthesis II
SHALO_RS07715	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
SHALO_RS07735	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
SHALO_RS07735	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
SHALO_RS07850	PWY-5747	2-methylcitrate cycle II
SHALO_RS07860	PWY-5484	glycolysis II (from fructose 6-phosphate)
SHALO_RS07930	PWY-6164	3-dehydroquinate biosynthesis I
SHALO_RS07955	PWY-3341	L-proline biosynthesis III
SHALO_RS07955	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
SHALO_RS08025	PWY-7294	xylose degradation IV
SHALO_RS08025	PWY-7295	L-arabinose degradation IV
SHALO_RS08060	PWY-5101	L-isoleucine biosynthesis II
SHALO_RS08060	PWY-5103	L-isoleucine biosynthesis III
SHALO_RS08060	PWY-5104	L-isoleucine biosynthesis IV
SHALO_RS08060	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
SHALO_RS08060	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
SHALO_RS08060	PWY-6389	(<i>S</i>)-acetoin biosynthesis
SHALO_RS08060	PWY-7111	pyruvate fermentation to isobutanol (engineered)
SHALO_RS08065	PWY-5101	L-isoleucine biosynthesis II
SHALO_RS08065	PWY-5103	L-isoleucine biosynthesis III
SHALO_RS08065	PWY-5104	L-isoleucine biosynthesis IV
SHALO_RS08065	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
SHALO_RS08065	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
SHALO_RS08065	PWY-6389	(<i>S</i>)-acetoin biosynthesis
SHALO_RS08065	PWY-7111	pyruvate fermentation to isobutanol (engineered)
SHALO_RS08120	PWY-6936	seleno-amino acid biosynthesis
SHALO_RS08120	PWY-7274	D-cycloserine biosynthesis
SHALO_RS08125	PWY-40	putrescine biosynthesis I
SHALO_RS08125	PWY-43	putrescine biosynthesis II
SHALO_RS08125	PWY-6305	putrescine biosynthesis IV
SHALO_RS08125	PWY-6834	spermidine biosynthesis III
SHALO_RS08135	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
SHALO_RS08135	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
SHALO_RS08135	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
SHALO_RS08135	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
SHALO_RS08135	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
SHALO_RS08135	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
SHALO_RS08165	PWY-6823	molybdenum cofactor biosynthesis
SHALO_RS08170	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
SHALO_RS08170	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
SHALO_RS08270	PWY-6700	queuosine biosynthesis
SHALO_RS08280	PWY-6164	3-dehydroquinate biosynthesis I
SHALO_RS08425	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
SHALO_RS08425	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
SHALO_RS08425	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
SHALO_RS08425	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
SHALO_RS08425	PWY-6978	plastoquinol-9 biosynthesis II
SHALO_RS08430	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
SHALO_RS08430	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
SHALO_RS08450	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
SHALO_RS08470	PWY-5344	L-homocysteine biosynthesis
SHALO_RS08470	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
SHALO_RS08480	PWY-6936	seleno-amino acid biosynthesis
SHALO_RS08505	PWY-6654	phosphopantothenate biosynthesis III
SHALO_RS08520	PWY-1042	glycolysis IV (plant cytosol)
SHALO_RS08520	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
SHALO_RS08520	PWY-5484	glycolysis II (from fructose 6-phosphate)
SHALO_RS08520	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
SHALO_RS08520	PWY-7385	1,3-propanediol biosynthesis (engineered)
SHALO_RS08580	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
SHALO_RS08580	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
SHALO_RS08590	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
SHALO_RS08670	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
SHALO_RS08670	PWY-6167	flavin biosynthesis II (archaea)
SHALO_RS08670	PWY-6168	flavin biosynthesis III (fungi)
SHALO_RS08695	PWY-6614	tetrahydrofolate biosynthesis
SHALO_RS08710	PWY-2941	L-lysine biosynthesis II
SHALO_RS08710	PWY-2942	L-lysine biosynthesis III
SHALO_RS08710	PWY-5097	L-lysine biosynthesis VI
SHALO_RS08710	PWY-6559	spermidine biosynthesis II
SHALO_RS08710	PWY-6562	norspermidine biosynthesis
SHALO_RS08710	PWY-7153	grixazone biosynthesis
SHALO_RS08820	PWY-5087	L-glutamate degradation VI (to pyruvate)
SHALO_RS08820	PWY-5103	L-isoleucine biosynthesis III
SHALO_RS08820	PWY-6728	methylaspartate cycle
SHALO_RS08860	PWY-6123	inosine-5'-phosphate biosynthesis I
SHALO_RS08860	PWY-6124	inosine-5'-phosphate biosynthesis II
SHALO_RS08860	PWY-7234	inosine-5'-phosphate biosynthesis III
SHALO_RS08865	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
SHALO_RS08865	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
SHALO_RS08865	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
SHALO_RS08870	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
SHALO_RS08870	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
SHALO_RS08870	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
SHALO_RS08880	PWY-5667	CDP-diacylglycerol biosynthesis I
SHALO_RS08880	PWY-5981	CDP-diacylglycerol biosynthesis III
SHALO_RS08880	PWY-6453	stigma estolide biosynthesis
SHALO_RS08880	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
SHALO_RS08880	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
SHALO_RS08880	PWY-7587	oleate biosynthesis III (cyanobacteria)
SHALO_RS08880	PWY-7589	palmitoleate biosynthesis III (cyanobacteria)
SHALO_RS08995	PWY-2201	folate transformations I
SHALO_RS09060	PWY-3781	aerobic respiration I (cytochrome c)
SHALO_RS09060	PWY-4521	arsenite oxidation I (respiratory)
SHALO_RS09060	PWY-6692	Fe(II) oxidation
SHALO_RS09060	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
SHALO_RS09075	PWY-6123	inosine-5'-phosphate biosynthesis I
SHALO_RS09075	PWY-6124	inosine-5'-phosphate biosynthesis II
SHALO_RS09075	PWY-7234	inosine-5'-phosphate biosynthesis III
SHALO_RS09100	PWY-6936	seleno-amino acid biosynthesis
SHALO_RS09125	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
SHALO_RS09125	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
SHALO_RS09125	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
SHALO_RS09145	PWY-6700	queuosine biosynthesis
SHALO_RS09300	PWY-6823	molybdenum cofactor biosynthesis
SHALO_RS09405	PWY-622	starch biosynthesis
SHALO_RS09445	PWY-2201	folate transformations I
SHALO_RS09445	PWY-3841	folate transformations II
SHALO_RS09515	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
SHALO_RS09515	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
SHALO_RS09515	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
SHALO_RS09515	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
SHALO_RS09540	PWY-6004	glycine betaine biosynthesis V (from glycine)
SHALO_RS09545	PWY-2201	folate transformations I
SHALO_RS09545	PWY-5497	purine nucleobases degradation II (anaerobic)
SHALO_RS09565	PWY-7396	butanol and isobutanol biosynthesis (engineered)
SHALO_RS09740	PWY-6672	<i>cis</i>-genanyl-CoA degradation
SHALO_RS09740	PWY-7118	chitin degradation to ethanol
SHALO_RS09745	PWY-5747	2-methylcitrate cycle II
SHALO_RS09820	PWY-6672	<i>cis</i>-genanyl-CoA degradation
SHALO_RS09820	PWY-7118	chitin degradation to ethanol
SHALO_RS09845	PWY-43	putrescine biosynthesis II
SHALO_RS09985	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
SHALO_RS09985	PWY-5723	Rubisco shunt
SHALO_RS09995	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
SHALO_RS10030	PWY-2161	folate polyglutamylation
SHALO_RS10070	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
SHALO_RS10070	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
SHALO_RS10105	PWY-7560	methylerythritol phosphate pathway II
SHALO_RS10145	PWY-5958	acridone alkaloid biosynthesis
SHALO_RS10145	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
SHALO_RS10145	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
SHALO_RS10150	PWY-5686	UMP biosynthesis
SHALO_RS10160	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
SHALO_RS10200	PWY-6829	tRNA methylation (yeast)
SHALO_RS10200	PWY-7285	methylwyosine biosynthesis
SHALO_RS10200	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
SHALO_RS10230	PWY-7675	Kdo transfer to lipid IV<sub>A</sub> II
SHALO_RS10255	PWY-6123	inosine-5'-phosphate biosynthesis I
SHALO_RS10255	PWY-7234	inosine-5'-phosphate biosynthesis III
SHALO_RS10275	PWY-381	nitrate reduction II (assimilatory)
SHALO_RS10275	PWY-5675	nitrate reduction V (assimilatory)
SHALO_RS10275	PWY-6549	L-glutamine biosynthesis III
SHALO_RS10275	PWY-6963	ammonia assimilation cycle I
SHALO_RS10275	PWY-6964	ammonia assimilation cycle II
SHALO_RS10395	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
SHALO_RS10395	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
SHALO_RS10395	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
SHALO_RS10395	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
SHALO_RS10460	PWY-5958	acridone alkaloid biosynthesis
SHALO_RS10460	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
SHALO_RS10460	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
SHALO_RS10490	PWY-5796	malonate decarboxylase activation
SHALO_RS10495	PWY-6038	citrate degradation
SHALO_RS10575	PWY-5198	factor 420 biosynthesis
SHALO_RS10575	PWY-7371	1,4-dihydroxy-6-naphthoate biosynthesis II
SHALO_RS10575	PWY-7374	1,4-dihydroxy-6-naphthoate biosynthesis I
SHALO_RS10605	PWY-6749	CMP-legionaminate biosynthesis I
SHALO_RS10795	PWY-7560	methylerythritol phosphate pathway II
SHALO_RS10805	PWY-5278	sulfite oxidation III
SHALO_RS10805	PWY-5340	sulfate activation for sulfonation
SHALO_RS10805	PWY-6683	sulfate reduction III (assimilatory)
SHALO_RS10805	PWY-6932	selenate reduction
SHALO_RS10815	PWY-5269	cardiolipin biosynthesis II
SHALO_RS10815	PWY-5668	cardiolipin biosynthesis I
SHALO_RS10830	PWY-5381	pyridine nucleotide cycling (plants)
SHALO_RS10875	PWY-3341	L-proline biosynthesis III
SHALO_RS10875	PWY-4981	L-proline biosynthesis II (from arginine)
SHALO_RS10875	PWY-6344	L-ornithine degradation II (Stickland reaction)
SHALO_RS10975	PWY-5686	UMP biosynthesis
SHALO_RS10985	PWY-6167	flavin biosynthesis II (archaea)
SHALO_RS10985	PWY-6168	flavin biosynthesis III (fungi)
SHALO_RS11000	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
SHALO_RS11000	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
SHALO_RS11020	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
SHALO_RS11030	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
SHALO_RS11040	PWY-6871	3-methylbutanol biosynthesis
SHALO_RS11045	PWY-5669	phosphatidylethanolamine biosynthesis I
SHALO_RS11050	PWY-5669	phosphatidylethanolamine biosynthesis I
SHALO_RS11095	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
SHALO_RS11095	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
SHALO_RS11095	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
SHALO_RS11150	PWY-5162	2-oxopentenoate degradation
SHALO_RS11155	PWY-5162	2-oxopentenoate degradation
SHALO_RS11155	PWY-5436	L-threonine degradation IV
SHALO_RS11155	PWY-5480	pyruvate fermentation to ethanol I
SHALO_RS11155	PWY-6587	pyruvate fermentation to ethanol III
SHALO_RS11155	PWY-7085	triethylamine degradation
SHALO_RS11155	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
SHALO_RS11165	PWY-5833	CDP-4-dehydro-3,6-dideoxy-D-glucose biosynthesis
SHALO_RS11170	PWY-5833	CDP-4-dehydro-3,6-dideoxy-D-glucose biosynthesis
SHALO_RS11170	PWY-5940	streptomycin biosynthesis
SHALO_RS11175	PWY-5481	pyruvate fermentation to lactate
SHALO_RS11175	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
SHALO_RS11175	PWY-6901	superpathway of glucose and xylose degradation
SHALO_RS11185	PWY-5738	GDP-6-deoxy-D-talose biosynthesis
SHALO_RS11185	PWY-5739	GDP-D-perosamine biosynthesis
SHALO_RS11185	PWY-5740	GDP-L-colitose biosynthesis
SHALO_RS11185	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
SHALO_RS11185	PWY-7573	GDP-mycosamine biosynthesis
SHALO_RS11190	PWY-5659	GDP-mannose biosynthesis
SHALO_RS11190	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
SHALO_RS11195	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
SHALO_RS11205	PWY-3221	dTDP-L-rhamnose biosynthesis II
SHALO_RS11205	PWY-6808	dTDP-D-forosamine biosynthesis
SHALO_RS11205	PWY-6942	dTDP-D-desosamine biosynthesis
SHALO_RS11205	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
SHALO_RS11205	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
SHALO_RS11205	PWY-6974	dTDP-L-olivose biosynthesis
SHALO_RS11205	PWY-6976	dTDP-L-mycarose biosynthesis
SHALO_RS11205	PWY-7104	dTDP-L-megosamine biosynthesis
SHALO_RS11205	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
SHALO_RS11205	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
SHALO_RS11205	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
SHALO_RS11205	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
SHALO_RS11205	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
SHALO_RS11205	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
SHALO_RS11205	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
SHALO_RS11205	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
SHALO_RS11205	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
SHALO_RS11205	PWY-7688	SHALO_RS11205
SHALO_RS11210	PWY-3221	dTDP-L-rhamnose biosynthesis II
SHALO_RS11210	PWY-6808	dTDP-D-forosamine biosynthesis
SHALO_RS11210	PWY-6942	dTDP-D-desosamine biosynthesis
SHALO_RS11210	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
SHALO_RS11210	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
SHALO_RS11210	PWY-6974	dTDP-L-olivose biosynthesis
SHALO_RS11210	PWY-6976	dTDP-L-mycarose biosynthesis
SHALO_RS11210	PWY-7104	dTDP-L-megosamine biosynthesis
SHALO_RS11210	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
SHALO_RS11210	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
SHALO_RS11210	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
SHALO_RS11210	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
SHALO_RS11210	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
SHALO_RS11210	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
SHALO_RS11210	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
SHALO_RS11210	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
SHALO_RS11210	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
SHALO_RS11210	PWY-7688	SHALO_RS11210
SHALO_RS11215	PWY-6749	CMP-legionaminate biosynthesis I
SHALO_RS11265	PWY-6478	GDP-D-<i>glycero</i>-&alpha;-D-<i>manno</i>-heptose biosynthesis
SHALO_RS11330	PWY-6167	flavin biosynthesis II (archaea)
SHALO_RS11330	PWY-6168	flavin biosynthesis III (fungi)
SHALO_RS11330	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
SHALO_RS11385	PWY-3781	aerobic respiration I (cytochrome c)
SHALO_RS11385	PWY-6692	Fe(II) oxidation
SHALO_RS11385	PWY-7082	ammonia oxidation IV (autotrophic ammonia oxidizers)
SHALO_RS11385	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
SHALO_RS11405	PWY-4381	fatty acid biosynthesis initiation I
SHALO_RS11405	PWY-5743	3-hydroxypropanoate cycle
SHALO_RS11405	PWY-5744	glyoxylate assimilation
SHALO_RS11405	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
SHALO_RS11405	PWY-6679	jadomycin biosynthesis
SHALO_RS11405	PWY-6722	candicidin biosynthesis
SHALO_RS11405	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
SHALO_RS11420	PWY-5367	petroselinate biosynthesis
SHALO_RS11420	PWY-5515	L-arabinose degradation II
SHALO_RS11420	PWY-5525	D-glucuronate degradation I
SHALO_RS11420	PWY-5971	palmitate biosynthesis II (bacteria and plants)
SHALO_RS11420	PWY-5973	<i>cis</i>-vaccenate biosynthesis
SHALO_RS11420	PWY-5989	stearate biosynthesis II (bacteria and plants)
SHALO_RS11420	PWY-5994	palmitate biosynthesis I (animals and fungi)
SHALO_RS11420	PWY-6113	superpathway of mycolate biosynthesis
SHALO_RS11420	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
SHALO_RS11420	PWY-6519	8-amino-7-oxononanoate biosynthesis I
SHALO_RS11420	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
SHALO_RS11420	PWY-7663	gondoate biosynthesis (anaerobic)
SHALO_RS11420	PWY-7664	oleate biosynthesis IV (anaerobic)
SHALO_RS11420	PWYG-321	mycolate biosynthesis
SHALO_RS11425	PWY-1042	glycolysis IV (plant cytosol)
SHALO_RS11425	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
SHALO_RS11425	PWY-5484	glycolysis II (from fructose 6-phosphate)
SHALO_RS11425	PWY-5723	Rubisco shunt
SHALO_RS11425	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
SHALO_RS11425	PWY-6886	1-butanol autotrophic biosynthesis
SHALO_RS11425	PWY-6901	superpathway of glucose and xylose degradation
SHALO_RS11425	PWY-7003	glycerol degradation to butanol
SHALO_RS11425	PWY-7124	ethylene biosynthesis V (engineered)
SHALO_RS11425	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
SHALO_RS11430	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
SHALO_RS11430	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
SHALO_RS11430	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
SHALO_RS11435	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
SHALO_RS11435	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
SHALO_RS11470	PWY-3221	dTDP-L-rhamnose biosynthesis II
SHALO_RS11470	PWY-6808	dTDP-D-forosamine biosynthesis
SHALO_RS11470	PWY-6942	dTDP-D-desosamine biosynthesis
SHALO_RS11470	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
SHALO_RS11470	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
SHALO_RS11470	PWY-6974	dTDP-L-olivose biosynthesis
SHALO_RS11470	PWY-6976	dTDP-L-mycarose biosynthesis
SHALO_RS11470	PWY-7104	dTDP-L-megosamine biosynthesis
SHALO_RS11470	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
SHALO_RS11470	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
SHALO_RS11470	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
SHALO_RS11470	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
SHALO_RS11470	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
SHALO_RS11470	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
SHALO_RS11470	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
SHALO_RS11470	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
SHALO_RS11470	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
SHALO_RS11470	PWY-7688	SHALO_RS11470
SHALO_RS11485	PWY-3221	dTDP-L-rhamnose biosynthesis II
SHALO_RS11485	PWY-6808	dTDP-D-forosamine biosynthesis
SHALO_RS11485	PWY-6942	dTDP-D-desosamine biosynthesis
SHALO_RS11485	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
SHALO_RS11485	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
SHALO_RS11485	PWY-6974	dTDP-L-olivose biosynthesis
SHALO_RS11485	PWY-6976	dTDP-L-mycarose biosynthesis
SHALO_RS11485	PWY-7104	dTDP-L-megosamine biosynthesis
SHALO_RS11485	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
SHALO_RS11485	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
SHALO_RS11485	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
SHALO_RS11485	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
SHALO_RS11485	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
SHALO_RS11485	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
SHALO_RS11485	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
SHALO_RS11485	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
SHALO_RS11485	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
SHALO_RS11485	PWY-7688	SHALO_RS11485
SHALO_RS11490	PWY-3821	galactose degradation III
SHALO_RS11490	PWY-6317	galactose degradation I (Leloir pathway)
SHALO_RS11490	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
SHALO_RS11490	PWY-6527	stachyose degradation
SHALO_RS11490	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
SHALO_RS11490	PWY-7344	UDP-D-galactose biosynthesis
SHALO_RS11670	PWY-6854	ethylene biosynthesis III (microbes)
SHALO_RS11695	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
SHALO_RS11695	PWY-6153	autoinducer AI-2 biosynthesis I
SHALO_RS11695	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
SHALO_RS11705	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
SHALO_RS11705	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
SHALO_RS11785	PWY-6703	preQ<sub>0</sub> biosynthesis
SHALO_RS11790	PWY-6703	preQ<sub>0</sub> biosynthesis
SHALO_RS11985	PWY-3781	aerobic respiration I (cytochrome c)
SHALO_RS11985	PWY-4521	arsenite oxidation I (respiratory)
SHALO_RS11985	PWY-6692	Fe(II) oxidation
SHALO_RS11985	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
SHALO_RS12005	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
SHALO_RS12005	PWY-5686	UMP biosynthesis
SHALO_RS12005	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
SHALO_RS12025	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
SHALO_RS12035	PWY-6832	2-aminoethylphosphonate degradation II
SHALO_RS12055	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
SHALO_RS12055	PWY-5723	Rubisco shunt
SHALO_RS12055	PWY-6891	thiazole biosynthesis II (Bacillus)
SHALO_RS12055	PWY-6892	thiazole biosynthesis I (E. coli)
SHALO_RS12055	PWY-6901	superpathway of glucose and xylose degradation
SHALO_RS12055	PWY-7560	methylerythritol phosphate pathway II
SHALO_RS12075	PWY-5155	&beta;-alanine biosynthesis III
SHALO_RS12305	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
SHALO_RS12330	PWY-4983	L-citrulline-nitric oxide cycle
SHALO_RS12330	PWY-4984	urea cycle
SHALO_RS12330	PWY-5	canavanine biosynthesis
SHALO_RS12330	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
SHALO_RS12330	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
SHALO_RS12555	PWY-7205	CMP phosphorylation
SHALO_RS12940	PWY-5785	di-<i>trans</i>,poly-<i>cis</i>-undecaprenyl phosphate biosynthesis
SHALO_RS12945	PWY-1042	glycolysis IV (plant cytosol)
SHALO_RS12945	PWY-1622	formaldehyde assimilation I (serine pathway)
SHALO_RS12945	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
SHALO_RS12945	PWY-5484	glycolysis II (from fructose 6-phosphate)
SHALO_RS12945	PWY-5723	Rubisco shunt
SHALO_RS12945	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
SHALO_RS12945	PWY-6886	1-butanol autotrophic biosynthesis
SHALO_RS12945	PWY-6901	superpathway of glucose and xylose degradation
SHALO_RS12945	PWY-7003	glycerol degradation to butanol
SHALO_RS12945	PWY-7124	ethylene biosynthesis V (engineered)
SHALO_RS12945	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
SHALO_RS13050	PWY-5392	reductive TCA cycle II
SHALO_RS13050	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
SHALO_RS13050	PWY-5690	TCA cycle II (plants and fungi)
SHALO_RS13050	PWY-5913	TCA cycle VI (obligate autotrophs)
SHALO_RS13050	PWY-6728	methylaspartate cycle
SHALO_RS13050	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
SHALO_RS13050	PWY-7254	TCA cycle VII (acetate-producers)
SHALO_RS13050	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
SHALO_RS13055	PWY-5392	reductive TCA cycle II
SHALO_RS13055	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
SHALO_RS13055	PWY-5690	TCA cycle II (plants and fungi)
SHALO_RS13055	PWY-5913	TCA cycle VI (obligate autotrophs)
SHALO_RS13055	PWY-6728	methylaspartate cycle
SHALO_RS13055	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
SHALO_RS13055	PWY-7254	TCA cycle VII (acetate-producers)
SHALO_RS13055	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
SHALO_RS13160	PWY-5674	nitrate reduction IV (dissimilatory)
SHALO_RS13230	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
SHALO_RS13520	PWY-3781	aerobic respiration I (cytochrome c)
SHALO_RS13520	PWY-4302	aerobic respiration III (alternative oxidase pathway)
SHALO_RS13520	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
SHALO_RS13520	PWY-5690	TCA cycle II (plants and fungi)
SHALO_RS13520	PWY-6728	methylaspartate cycle
SHALO_RS13520	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
SHALO_RS13520	PWY-7254	TCA cycle VII (acetate-producers)
SHALO_RS13520	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
SHALO_RS13525	PWY-3781	aerobic respiration I (cytochrome c)
SHALO_RS13525	PWY-4302	aerobic respiration III (alternative oxidase pathway)
SHALO_RS13525	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
SHALO_RS13525	PWY-5690	TCA cycle II (plants and fungi)
SHALO_RS13525	PWY-6728	methylaspartate cycle
SHALO_RS13525	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
SHALO_RS13525	PWY-7254	TCA cycle VII (acetate-producers)
SHALO_RS13525	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
SHALO_RS13740	PWY-5169	cyanurate degradation
SHALO_RS13740	PWY-5703	urea degradation I
SHALO_RS13740	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
SHALO_RS13745	PWY-5169	cyanurate degradation
SHALO_RS13745	PWY-5703	urea degradation I
SHALO_RS13835	PWY-6562	norspermidine biosynthesis
SHALO_RS13860	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
SHALO_RS13895	PWY-6823	molybdenum cofactor biosynthesis
SHALO_RS13900	PWY-6823	molybdenum cofactor biosynthesis
SHALO_RS13915	PWY-6823	molybdenum cofactor biosynthesis
SHALO_RS13915	PWY-6891	thiazole biosynthesis II (Bacillus)
SHALO_RS13915	PWY-6892	thiazole biosynthesis I (E. coli)
SHALO_RS13915	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
SHALO_RS13920	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
SHALO_RS13925	PWY-5663	tetrahydrobiopterin biosynthesis I
SHALO_RS13925	PWY-5664	tetrahydrobiopterin biosynthesis II
SHALO_RS13925	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
SHALO_RS13925	PWY-6703	preQ<sub>0</sub> biosynthesis
SHALO_RS13925	PWY-6983	tetrahydrobiopterin biosynthesis III
SHALO_RS13925	PWY-7442	drosopterin and aurodrosopterin biosynthesis
SHALO_RS13955	PWY-6938	NADH repair
SHALO_RS13960	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
SHALO_RS13960	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
SHALO_RS13965	PWY-6891	thiazole biosynthesis II (Bacillus)
SHALO_RS13965	PWY-6892	thiazole biosynthesis I (E. coli)
SHALO_RS14300	PWY-6854	ethylene biosynthesis III (microbes)
SHALO_RS14320	PWY-5278	sulfite oxidation III
SHALO_RS14320	PWY-5340	sulfate activation for sulfonation
SHALO_RS14320	PWY-6683	sulfate reduction III (assimilatory)
SHALO_RS14320	PWY-6932	selenate reduction
SHALO_RS14340	PWY-6683	sulfate reduction III (assimilatory)
SHALO_RS14345	PWY-5194	siroheme biosynthesis
SHALO_RS14345	PWY-5441	S-methyl-L-methionine cycle
SHALO_RS14345	PWY-702	L-methionine biosynthesis II
SHALO_RS14345	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
SHALO_RS14435	PWY-7429	arsenite oxidation II (respiratory)
SHALO_RS14440	PWY-7429	arsenite oxidation II (respiratory)
SHALO_RS14515	PWY-7371	1,4-dihydroxy-6-naphthoate biosynthesis II
SHALO_RS14515	PWY-7374	1,4-dihydroxy-6-naphthoate biosynthesis I
SHALO_RS14525	PWY-7183	pyrimidine nucleobases salvage I
SHALO_RS14535	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
SHALO_RS14555	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
SHALO_RS14590	PWY-1042	glycolysis IV (plant cytosol)
SHALO_RS14590	PWY-1622	formaldehyde assimilation I (serine pathway)
SHALO_RS14590	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
SHALO_RS14590	PWY-5484	glycolysis II (from fructose 6-phosphate)
SHALO_RS14590	PWY-5723	Rubisco shunt
SHALO_RS14590	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
SHALO_RS14590	PWY-6143	CMP-pseudaminate biosynthesis
SHALO_RS14590	PWY-6886	1-butanol autotrophic biosynthesis
SHALO_RS14590	PWY-6901	superpathway of glucose and xylose degradation
SHALO_RS14590	PWY-7003	glycerol degradation to butanol
SHALO_RS14590	PWY-7124	ethylene biosynthesis V (engineered)
SHALO_RS14590	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
SHALO_RS14590	PWY-7330	UDP-<i>N</i>-acetyl-&beta;-L-fucosamine biosynthesis
SHALO_RS14590	PWY-7331	UDP-<i>N</i>-acetyl-&beta;-L-quinovosamine biosynthesis
SHALO_RS14590	PWY-7332	superpathway of UDP-<I>N</i>-acetylglucosamine-derived O-antigen building blocks biosynthesis
SHALO_RS14590	PWY-7719	SHALO_RS14590
SHALO_RS14600	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
SHALO_RS14600	PWY-6143	CMP-pseudaminate biosynthesis
SHALO_RS14615	PWY-6143	CMP-pseudaminate biosynthesis
SHALO_RS14715	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
SHALO_RS14735	PWY-1042	glycolysis IV (plant cytosol)
SHALO_RS14735	PWY-1622	formaldehyde assimilation I (serine pathway)
SHALO_RS14735	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
SHALO_RS14735	PWY-5484	glycolysis II (from fructose 6-phosphate)
SHALO_RS14735	PWY-5723	Rubisco shunt
SHALO_RS14735	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
SHALO_RS14735	PWY-6886	1-butanol autotrophic biosynthesis
SHALO_RS14735	PWY-6901	superpathway of glucose and xylose degradation
SHALO_RS14735	PWY-7003	glycerol degradation to butanol
SHALO_RS14735	PWY-7124	ethylene biosynthesis V (engineered)
SHALO_RS14735	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
SHALO_RS14755	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
SHALO_RS14755	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
SHALO_RS14760	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
SHALO_RS14760	PWY-5368	dimorphecolate biosynthesis
SHALO_RS14760	PWY-5995	linoleate biosynthesis I (plants)
SHALO_RS14760	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
SHALO_RS14760	PWY-6803	phosphatidylcholine acyl editing
SHALO_RS14760	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
SHALO_RS14760	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
SHALO_RS14760	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
SHALO_RS14760	PWY-7470	phosphatidylcholine biosynthesis VII
SHALO_RS14760	PWY-7618	ricinoleate biosynthesis
SHALO_RS14805	PWY-7294	xylose degradation IV
SHALO_RS14805	PWY-7295	L-arabinose degradation IV
SHALO_RS14805	PWY-7560	methylerythritol phosphate pathway II
SHALO_RS14810	PWY-5667	CDP-diacylglycerol biosynthesis I
SHALO_RS14810	PWY-5981	CDP-diacylglycerol biosynthesis III
SHALO_RS14870	PWY-5964	guanylyl molybdenum cofactor biosynthesis
SHALO_RS14870	PWY-7639	bis(guanylyl molybdenum cofactor) biosynthesis
SHALO_RS14895	PWY-6803	phosphatidylcholine acyl editing
SHALO_RS14895	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
SHALO_RS14895	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
SHALO_RS14895	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
SHALO_RS15105	PWY-5686	UMP biosynthesis
SHALO_RS15170	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
SHALO_RS15170	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
SHALO_RS15170	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
SHALO_RS15170	PWY-6936	seleno-amino acid biosynthesis
SHALO_RS15170	PWY-702	L-methionine biosynthesis II
