SHALO_RS00005	PF00308	Bacterial dnaA  protein
SHALO_RS00005	PF08299	Bacterial dnaA protein helix-turn-helix
SHALO_RS00005	PF11638	DnaA N-terminal domain
SHALO_RS00010	PF00712	DNA polymerase III beta subunit, N-terminal domain
SHALO_RS00010	PF02767	DNA polymerase III beta subunit, central domain
SHALO_RS00010	PF02768	DNA polymerase III beta subunit, C-terminal domain
SHALO_RS00015	PF00204	DNA gyrase B
SHALO_RS00015	PF00986	DNA gyrase B subunit, carboxyl terminus
SHALO_RS00015	PF01751	Toprim domain
SHALO_RS00015	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SHALO_RS00020	PF00563	EAL domain
SHALO_RS00020	PF00990	GGDEF domain
SHALO_RS00025	PF14489	QueF-like protein
SHALO_RS00030	PF13023	HD domain
SHALO_RS00040	PF03167	Uracil DNA glycosylase superfamily
SHALO_RS00045	PF00730	HhH-GPD superfamily base excision DNA repair protein
SHALO_RS00045	PF14815	NUDIX domain
SHALO_RS00050	PF00005	ABC transporter
SHALO_RS00050	PF00571	CBS domain
SHALO_RS00055	PF00528	Binding-protein-dependent transport system inner membrane component
SHALO_RS00060	PF04069	Substrate binding domain of ABC-type glycine betaine transport system
SHALO_RS00065	PF07690	Major Facilitator Superfamily
SHALO_RS00070	PF05681	SHALO_RS00070
SHALO_RS00075	PF05683	Fumarase C-terminus
SHALO_RS00080	PF00392	Bacterial regulatory proteins, gntR family
SHALO_RS00080	PF07729	FCD domain
SHALO_RS00085	PF00330	Aconitase family (aconitate hydratase)
SHALO_RS00090	PF00694	Aconitase C-terminal domain
SHALO_RS00100	PF08238	Sel1 repeat
SHALO_RS00120	PF00990	GGDEF domain
SHALO_RS00120	PF02743	Cache domain
SHALO_RS00120	PF08447	PAS fold
SHALO_RS00130	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
SHALO_RS00130	PF13682	Chemoreceptor zinc-binding domain
SHALO_RS00140	PF06826	SHALO_RS00140
SHALO_RS00145	PF05538	SHALO_RS00145
SHALO_RS00150	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SHALO_RS00150	PF02743	Cache domain
SHALO_RS00155	PF00072	Response regulator receiver domain
SHALO_RS00155	PF00486	Transcriptional regulatory protein, C terminal
SHALO_RS00160	PF05935	Arylsulfotransferase (ASST)
SHALO_RS00165	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
SHALO_RS00165	PF00672	HAMP domain
SHALO_RS00165	PF02743	Cache domain
SHALO_RS00170	PF02600	Disulfide bond formation protein DsbB
SHALO_RS00175	PF01323	DSBA-like thioredoxin domain
SHALO_RS00185	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
SHALO_RS00185	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
SHALO_RS00190	PF00857	Isochorismatase family
SHALO_RS00195	PF00440	Bacterial regulatory proteins, tetR family
SHALO_RS00195	PF16925	SHALO_RS00195
SHALO_RS00200	PF00583	Acetyltransferase (GNAT) family
SHALO_RS00205	PF06445	GyrI-like small molecule binding domain
SHALO_RS00205	PF12833	Helix-turn-helix domain
SHALO_RS00210	PF13489	Methyltransferase domain
SHALO_RS00220	PF01875	Memo-like protein
SHALO_RS00225	PF04055	Radical SAM superfamily
SHALO_RS00230	PF01871	AMMECR1
SHALO_RS00240	PF02311	AraC-like ligand binding domain
SHALO_RS00240	PF12833	Helix-turn-helix domain
SHALO_RS00245	PF00892	EamA-like transporter family
SHALO_RS00250	PF05728	Uncharacterised protein family (UPF0227)
SHALO_RS00255	PF01946	Thi4 family
SHALO_RS00265	PF00384	Molybdopterin oxidoreductase
SHALO_RS00265	PF01568	Molydopterin dinucleotide binding domain
SHALO_RS00265	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
SHALO_RS00270	PF00589	Phage integrase family
SHALO_RS00275	PF13589	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SHALO_RS00280	PF10593	SHALO_RS00280
SHALO_RS00285	PF14390	SHALO_RS00285
SHALO_RS00290	PF10592	SHALO_RS00290
SHALO_RS00300	PF00145	C-5 cytosine-specific DNA methylase
SHALO_RS00310	PF02810	SEC-C motif
SHALO_RS00310	PF13374	Tetratricopeptide repeat
SHALO_RS00310	PF13424	Tetratricopeptide repeat
SHALO_RS00320	PF02661	Fic/DOC family
SHALO_RS00325	PF09565	SHALO_RS00325
SHALO_RS00350	PF07022	Bacteriophage CI repressor helix-turn-helix domain
SHALO_RS00355	PF09681	SHALO_RS00355
SHALO_RS00385	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
SHALO_RS00395	PF08751	TrwC relaxase
SHALO_RS00395	PF13604	AAA domain
SHALO_RS00400	PF10412	Type IV secretion-system coupling protein DNA-binding domain
SHALO_RS00405	PF13744	Helix-turn-helix domain
SHALO_RS00410	PF05973	SHALO_RS00410
SHALO_RS00435	PF00920	Dehydratase family
SHALO_RS00440	PF01914	SHALO_RS00440
SHALO_RS00450	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
SHALO_RS00455	PF00483	Nucleotidyl transferase
SHALO_RS00460	PF00117	Glutamine amidotransferase class-I
SHALO_RS00460	PF06418	CTP synthase N-terminus
SHALO_RS00465	PF01368	DHH family
SHALO_RS00465	PF02272	DHHA1 domain
SHALO_RS00470	PF01135	Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
SHALO_RS00475	PF00795	Carbon-nitrogen hydrolase
SHALO_RS00480	PF00268	Ribonucleotide reductase, small chain
SHALO_RS00485	PF00515	Tetratricopeptide repeat
SHALO_RS00485	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
SHALO_RS00485	PF13424	Tetratricopeptide repeat
SHALO_RS00490	PF04055	Radical SAM superfamily
SHALO_RS00490	PF13353	4Fe-4S single cluster domain
SHALO_RS00495	PF03477	ATP cone domain
SHALO_RS00495	PF13597	Anaerobic ribonucleoside-triphosphate reductase
SHALO_RS00500	PF01177	Asp/Glu/Hydantoin racemase
SHALO_RS00505	PF00317	Ribonucleotide reductase, all-alpha domain
SHALO_RS00505	PF02867	Ribonucleotide reductase, barrel domain
SHALO_RS00505	PF03477	ATP cone domain
SHALO_RS00510	PF00206	Lyase
SHALO_RS00510	PF10397	Adenylosuccinate lyase C-terminus
SHALO_RS00515	PF00849	RNA pseudouridylate synthase
SHALO_RS00520	PF01557	Fumarylacetoacetate (FAA) hydrolase family
SHALO_RS00525	PF04055	Radical SAM superfamily
SHALO_RS00535	PF00977	Histidine biosynthesis protein
SHALO_RS00540	PF00398	Ribosomal RNA adenine dimethylase
SHALO_RS00545	PF00753	Metallo-beta-lactamase superfamily
SHALO_RS00545	PF07521	RNA-metabolising metallo-beta-lactamase
SHALO_RS00550	PF00571	CBS domain
SHALO_RS00550	PF01380	SIS domain
SHALO_RS00555	PF00849	RNA pseudouridylate synthase
SHALO_RS00555	PF01479	S4 domain
SHALO_RS00560	PF05496	Holliday junction DNA helicase ruvB N-terminus
SHALO_RS00560	PF12002	MgsA AAA+ ATPase C terminal
SHALO_RS00560	PF16193	SHALO_RS00560
SHALO_RS00565	PF02120	Flagellar hook-length control protein FliK
SHALO_RS00570	PF01312	FlhB HrpN YscU SpaS Family
SHALO_RS00575	PF02698	DUF218 domain
SHALO_RS00580	PF00586	AIR synthase related protein, N-terminal domain
SHALO_RS00580	PF02769	AIR synthase related protein, C-terminal domain
SHALO_RS00585	PF01121	Dephospho-CoA kinase
SHALO_RS00590	PF01678	Diaminopimelate epimerase
SHALO_RS00595	PF01832	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
SHALO_RS00600	PF00472	RF-1 domain
SHALO_RS00600	PF03462	PCRF domain
SHALO_RS00605	PF01649	Ribosomal protein S20
SHALO_RS00610	PF02254	TrkA-N domain
SHALO_RS00620	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
SHALO_RS00620	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
SHALO_RS00620	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
SHALO_RS00620	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
SHALO_RS00625	PF01252	SHALO_RS00625
SHALO_RS00635	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
SHALO_RS00635	PF03129	Anticodon binding domain
SHALO_RS00635	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
SHALO_RS00640	PF00707	Translation initiation factor IF-3, C-terminal domain
SHALO_RS00640	PF05198	Translation initiation factor IF-3, N-terminal domain
SHALO_RS00645	PF01632	Ribosomal protein L35
SHALO_RS00650	PF00453	Ribosomal protein L20
SHALO_RS00655	PF11614	IG-like fold at C-terminal of FixG, putative oxidoreductase
SHALO_RS00655	PF12801	SHALO_RS00655
SHALO_RS00655	PF13746	4Fe-4S dicluster domain
SHALO_RS00660	PF00239	Resolvase, N terminal domain
SHALO_RS00665	PF01165	Ribosomal protein S21
SHALO_RS00680	PF03738	Glutathionylspermidine synthase preATP-grasp
SHALO_RS00685	PF04461	Protein of unknown function (DUF520)
SHALO_RS00695	PF01219	Prokaryotic diacylglycerol kinase
SHALO_RS00700	PF01274	Malate synthase
SHALO_RS00715	PF00034	Cytochrome c
SHALO_RS00725	PF00512	His Kinase A (phospho-acceptor) domain
SHALO_RS00725	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SHALO_RS00730	PF00072	Response regulator receiver domain
SHALO_RS00730	PF00486	Transcriptional regulatory protein, C terminal
SHALO_RS00740	PF03886	Protein of unknown function (DUF330)
SHALO_RS00745	PF02470	SHALO_RS00745
SHALO_RS00750	PF00005	ABC transporter
SHALO_RS00755	PF02405	SHALO_RS00755
SHALO_RS00760	PF01625	Peptide methionine sulfoxide reductase
SHALO_RS00765	PF01914	SHALO_RS00765
SHALO_RS00770	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
SHALO_RS00770	PF00672	HAMP domain
SHALO_RS00770	PF08269	Cache domain
SHALO_RS00775	PF07690	Major Facilitator Superfamily
SHALO_RS00780	PF01966	HD domain
SHALO_RS00790	PF13489	Methyltransferase domain
SHALO_RS00795	PF13458	Periplasmic binding protein
SHALO_RS00800	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SHALO_RS00800	PF12729	SHALO_RS00800
SHALO_RS00805	PF00072	Response regulator receiver domain
SHALO_RS00805	PF05732	SHALO_RS00805
SHALO_RS00810	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
SHALO_RS00815	PF00543	Nitrogen regulatory protein P-II
SHALO_RS00820	PF00909	Ammonium Transporter Family
SHALO_RS00825	PF00248	Aldo/keto reductase family
SHALO_RS00830	PF01979	Amidohydrolase family
SHALO_RS00835	PF00072	Response regulator receiver domain
SHALO_RS00835	PF00486	Transcriptional regulatory protein, C terminal
SHALO_RS00840	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SHALO_RS00845	PF07238	PilZ domain
SHALO_RS00850	PF00528	Binding-protein-dependent transport system inner membrane component
SHALO_RS00855	PF00497	Bacterial extracellular solute-binding proteins, family 3
SHALO_RS00860	PF00005	ABC transporter
SHALO_RS00870	PF00034	Cytochrome c
SHALO_RS00875	PF00892	EamA-like transporter family
SHALO_RS00880	PF00950	SHALO_RS00880
SHALO_RS00885	PF00005	ABC transporter
SHALO_RS00890	PF01297	Periplasmic solute binding protein family
SHALO_RS00895	PF01475	Ferric uptake regulator family
SHALO_RS00905	PF01261	Xylose isomerase-like TIM barrel
SHALO_RS00910	PF03349	Outer membrane protein transport protein (OMPP1/FadL/TodX)
SHALO_RS00915	PF00501	AMP-binding enzyme
SHALO_RS00915	PF13193	AMP-binding enzyme C-terminal domain
SHALO_RS00920	PF00004	ATPase family associated with various cellular activities (AAA)
SHALO_RS00925	PF00507	NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
SHALO_RS00930	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
SHALO_RS00935	PF00329	Respiratory-chain NADH dehydrogenase, 30 Kd subunit
SHALO_RS00940	PF00346	Respiratory-chain NADH dehydrogenase, 49 Kd subunit
SHALO_RS00945	PF16514	SHALO_RS00945
SHALO_RS00955	PF10588	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
SHALO_RS00955	PF13510	2Fe-2S iron-sulfur cluster binding domain
SHALO_RS00960	PF00146	NADH dehydrogenase
SHALO_RS00965	PF12838	4Fe-4S dicluster domain
SHALO_RS00970	PF00499	NADH-ubiquinone/plastoquinone oxidoreductase chain 6
SHALO_RS00975	PF00420	NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
SHALO_RS00980	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
SHALO_RS00980	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
SHALO_RS00985	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
SHALO_RS00990	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
SHALO_RS01000	PF00171	Aldehyde dehydrogenase family
SHALO_RS01005	PF01715	IPP transferase
SHALO_RS01010	PF01040	UbiA prenyltransferase family
SHALO_RS01025	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
SHALO_RS01025	PF13682	Chemoreceptor zinc-binding domain
SHALO_RS01030	PF08447	PAS fold
SHALO_RS01035	PF04055	Radical SAM superfamily
SHALO_RS01035	PF06463	Molybdenum Cofactor Synthesis C
SHALO_RS01035	PF13353	4Fe-4S single cluster domain
SHALO_RS01040	PF00994	Probable molybdopterin binding domain
SHALO_RS01040	PF03453	MoeA N-terminal region (domain I and II)
SHALO_RS01050	PF04452	RNA methyltransferase
SHALO_RS01055	PF01197	Ribosomal protein L31
SHALO_RS01060	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
SHALO_RS01065	PF00588	SpoU rRNA Methylase family
SHALO_RS01065	PF08032	RNA 2'-O ribose methyltransferase substrate binding
SHALO_RS01080	PF00155	Aminotransferase class I and II
SHALO_RS01085	PF00742	Homoserine dehydrogenase
SHALO_RS01085	PF01842	ACT domain
SHALO_RS01085	PF03447	Homoserine dehydrogenase, NAD binding domain
SHALO_RS01090	PF02021	Uncharacterised protein family UPF0102
SHALO_RS01095	PF00085	Thioredoxin
SHALO_RS01100	PF07992	Pyridine nucleotide-disulphide oxidoreductase
SHALO_RS01105	PF01113	Dihydrodipicolinate reductase, N-terminus
SHALO_RS01105	PF05173	Dihydrodipicolinate reductase, C-terminus
SHALO_RS01110	PF00156	Phosphoribosyl transferase domain
SHALO_RS01110	PF13537	Glutamine amidotransferase domain
SHALO_RS01115	PF04055	Radical SAM superfamily
SHALO_RS01115	PF16199	SHALO_RS01115
SHALO_RS01120	PF09624	SHALO_RS01120
SHALO_RS01125	PF09624	SHALO_RS01125
SHALO_RS01130	PF01502	Phosphoribosyl-AMP cyclohydrolase
SHALO_RS01130	PF01503	Phosphoribosyl-ATP pyrophosphohydrolase
SHALO_RS01135	PF01145	SPFH domain / Band 7 family
SHALO_RS01140	PF01063	Aminotransferase class IV
SHALO_RS01145	PF00171	Aldehyde dehydrogenase family
SHALO_RS01150	PF00578	AhpC/TSA family
SHALO_RS01155	PF05359	SHALO_RS01155
SHALO_RS01160	PF02677	SHALO_RS01160
SHALO_RS01165	PF07977	FabA-like domain
SHALO_RS01170	PF00132	Bacterial transferase hexapeptide (six repeats)
SHALO_RS01170	PF13720	Udp N-acetylglucosamine O-acyltransferase; Domain 2
SHALO_RS01175	PF06689	ClpX C4-type zinc finger
SHALO_RS01175	PF07724	AAA domain (Cdc48 subfamily)
SHALO_RS01175	PF10431	C-terminal, D2-small domain, of ClpB protein
SHALO_RS01180	PF06723	MreB/Mbl protein
SHALO_RS01185	PF04085	rod shape-determining protein MreC
SHALO_RS01190	PF02142	MGS-like domain
SHALO_RS01190	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
SHALO_RS01190	PF02787	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
SHALO_RS01200	PF04365	Protein of unknown function (DUF497)
SHALO_RS01205	PF14384	SHALO_RS01205
SHALO_RS01220	PF00899	ThiF family
SHALO_RS01225	PF01975	Survival protein SurE
SHALO_RS01230	PF02684	SHALO_RS01230
SHALO_RS01235	PF01272	Transcription elongation factor, GreA/GreB, C-term
SHALO_RS01235	PF03449	Transcription elongation factor, N-terminal
SHALO_RS01240	PF01118	Semialdehyde dehydrogenase, NAD binding domain
SHALO_RS01240	PF02774	Semialdehyde dehydrogenase, dimerisation domain
SHALO_RS01245	PF00149	Calcineurin-like phosphoesterase
SHALO_RS01250	PF00072	Response regulator receiver domain
SHALO_RS01250	PF01584	CheW-like domain
SHALO_RS01255	PF00072	Response regulator receiver domain
SHALO_RS01255	PF01584	CheW-like domain
SHALO_RS01255	PF01627	Hpt domain
SHALO_RS01255	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SHALO_RS01255	PF02895	Signal transducing histidine kinase, homodimeric domain
SHALO_RS01260	PF01584	CheW-like domain
SHALO_RS01265	PF02219	Methylenetetrahydrofolate reductase
SHALO_RS01270	PF12710	haloacid dehalogenase-like hydrolase
SHALO_RS01275	PF00923	Transaldolase
SHALO_RS01280	PF00437	Type II/IV secretion system protein
SHALO_RS01285	PF01386	Ribosomal L25p family
SHALO_RS01285	PF14693	Ribosomal protein TL5, C-terminal domain
SHALO_RS01290	PF01195	Peptidyl-tRNA hydrolase
SHALO_RS01295	PF03739	SHALO_RS01295
SHALO_RS01300	PF00278	Pyridoxal-dependent decarboxylase, C-terminal sheet domain
SHALO_RS01300	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
SHALO_RS01305	PF00800	Prephenate dehydratase
SHALO_RS01305	PF01817	Chorismate mutase type II
SHALO_RS01305	PF01842	ACT domain
SHALO_RS01310	PF00155	Aminotransferase class I and II
SHALO_RS01315	PF01514	Secretory protein of YscJ/FliF family
SHALO_RS01315	PF08345	SHALO_RS01315
SHALO_RS01320	PF01706	FliG C-terminal domain
SHALO_RS01320	PF14841	FliG middle domain
SHALO_RS01320	PF14842	FliG N-terminal domain
SHALO_RS01330	PF13613	SHALO_RS01330
SHALO_RS01335	PF13359	SHALO_RS01335
SHALO_RS01340	PF02108	SHALO_RS01340
SHALO_RS01345	PF02779	Transketolase, pyrimidine binding domain
SHALO_RS01345	PF02780	Transketolase, C-terminal domain
SHALO_RS01345	PF13292	1-deoxy-D-xylulose-5-phosphate synthase
SHALO_RS01350	PF01475	Ferric uptake regulator family
SHALO_RS01355	PF00578	AhpC/TSA family
SHALO_RS01355	PF10417	C-terminal domain of 1-Cys peroxiredoxin
SHALO_RS01360	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
SHALO_RS01360	PF00672	HAMP domain
SHALO_RS01360	PF17201	SHALO_RS01360
SHALO_RS01365	PF12838	4Fe-4S dicluster domain
SHALO_RS01370	PF00334	Nucleoside diphosphate kinase
SHALO_RS01380	PF01783	Ribosomal L32p protein family
SHALO_RS01385	PF02504	Fatty acid synthesis protein
SHALO_RS01390	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
SHALO_RS01390	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
SHALO_RS01395	PF02153	Prephenate dehydrogenase
SHALO_RS01400	PF01103	Surface antigen
SHALO_RS01400	PF07244	Surface antigen variable number repeat
SHALO_RS01405	PF02541	Ppx/GppA phosphatase family
SHALO_RS01410	PF00037	4Fe-4S binding domain
SHALO_RS01415	PF00512	His Kinase A (phospho-acceptor) domain
SHALO_RS01415	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SHALO_RS01420	PF00072	Response regulator receiver domain
SHALO_RS01420	PF00486	Transcriptional regulatory protein, C terminal
SHALO_RS01425	PF02152	Dihydroneopterin aldolase
SHALO_RS01430	PF02660	SHALO_RS01430
SHALO_RS01435	PF02445	Quinolinate synthetase A protein
SHALO_RS01440	PF01729	Quinolinate phosphoribosyl transferase, C-terminal domain
SHALO_RS01440	PF02749	Quinolinate phosphoribosyl transferase, N-terminal domain
SHALO_RS01445	PF01312	FlhB HrpN YscU SpaS Family
SHALO_RS01450	PF01368	DHH family
SHALO_RS01450	PF02272	DHHA1 domain
SHALO_RS01455	PF01551	Peptidase family M23
SHALO_RS01460	PF03775	Septum formation inhibitor MinC, C-terminal domain
SHALO_RS01465	PF03331	UDP-3-O-acyl N-acetylglycosamine deacetylase
SHALO_RS01475	PF00288	GHMP kinases N terminal domain
SHALO_RS01480	PF04296	Protein of unknown function (DUF448)
SHALO_RS01485	PF00009	Elongation factor Tu GTP binding domain
SHALO_RS01485	PF04760	Translation initiation factor IF-2, N-terminal region
SHALO_RS01485	PF11987	Translation-initiation factor 2
SHALO_RS01490	PF02033	Ribosome-binding factor A
SHALO_RS01495	PF02576	Uncharacterised BCR, YhbC family COG0779
SHALO_RS01500	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
SHALO_RS01505	PF03745	Domain of unknown function (DUF309)
SHALO_RS01510	PF00563	EAL domain
SHALO_RS01510	PF00990	GGDEF domain
SHALO_RS01510	PF05228	SHALO_RS01510
SHALO_RS01510	PF08447	PAS fold
SHALO_RS01515	PF00313	'Cold-shock' DNA-binding domain
SHALO_RS01520	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SHALO_RS01525	PF00072	Response regulator receiver domain
SHALO_RS01525	PF00486	Transcriptional regulatory protein, C terminal
SHALO_RS01530	PF14827	Sensory domain of two-component sensor kinase
SHALO_RS01535	PF00034	Cytochrome c
SHALO_RS01540	PF11756	SHALO_RS01540
SHALO_RS01545	PF04055	Radical SAM superfamily
SHALO_RS01545	PF05430	S-adenosyl-L-methionine-dependent methyltransferase
SHALO_RS01545	PF16199	SHALO_RS01545
SHALO_RS01555	PF00384	Molybdopterin oxidoreductase
SHALO_RS01555	PF01568	Molydopterin dinucleotide binding domain
SHALO_RS01555	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
SHALO_RS01560	PF13247	4Fe-4S dicluster domain
SHALO_RS01565	PF03916	SHALO_RS01565
SHALO_RS01570	PF00563	EAL domain
SHALO_RS01570	PF00990	GGDEF domain
SHALO_RS01570	PF08495	SHALO_RS01570
SHALO_RS01570	PF10442	SHALO_RS01570
SHALO_RS01570	PF13426	PAS domain
SHALO_RS01575	PF00384	Molybdopterin oxidoreductase
SHALO_RS01575	PF01568	Molydopterin dinucleotide binding domain
SHALO_RS01575	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
SHALO_RS01580	PF13247	4Fe-4S dicluster domain
SHALO_RS01585	PF03916	SHALO_RS01585
SHALO_RS01590	PF00072	Response regulator receiver domain
SHALO_RS01590	PF00486	Transcriptional regulatory protein, C terminal
SHALO_RS01595	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SHALO_RS01600	PF14827	Sensory domain of two-component sensor kinase
SHALO_RS01605	PF04055	Radical SAM superfamily
SHALO_RS01605	PF13394	4Fe-4S single cluster domain
SHALO_RS01615	PF01368	DHH family
SHALO_RS01615	PF02833	DHHA2 domain
SHALO_RS01625	PF05818	SHALO_RS01625
SHALO_RS01630	PF01209	ubiE/COQ5 methyltransferase family
SHALO_RS01635	PF02601	SHALO_RS01635
SHALO_RS01635	PF13742	SHALO_RS01635
SHALO_RS01640	PF05082	Rop-like
SHALO_RS01645	PF00990	GGDEF domain
SHALO_RS01650	PF00497	Bacterial extracellular solute-binding proteins, family 3
SHALO_RS01650	PF00990	GGDEF domain
SHALO_RS01650	PF13185	GAF domain
SHALO_RS01650	PF13426	PAS domain
SHALO_RS01655	PF00962	Adenosine/AMP deaminase
SHALO_RS01660	PF13561	Enoyl-(Acyl carrier protein) reductase
SHALO_RS01665	PF06719	SHALO_RS01665
SHALO_RS01665	PF12833	Helix-turn-helix domain
SHALO_RS01670	PF00926	3,4-dihydroxy-2-butanone 4-phosphate synthase
SHALO_RS01675	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SHALO_RS01675	PF03466	LysR substrate binding domain
SHALO_RS01680	PF03601	SHALO_RS01680
SHALO_RS01685	PF00255	Glutathione peroxidase
SHALO_RS01690	PF00149	Calcineurin-like phosphoesterase
SHALO_RS01700	PF00117	Glutamine amidotransferase class-I
SHALO_RS01705	PF00593	TonB dependent receptor
SHALO_RS01705	PF07715	TonB-dependent Receptor Plug Domain
SHALO_RS01710	PF12974	ABC transporter, phosphonate, periplasmic substrate-binding protein
SHALO_RS01720	PF00528	Binding-protein-dependent transport system inner membrane component
SHALO_RS01725	PF00005	ABC transporter
SHALO_RS01730	PF05940	SHALO_RS01730
SHALO_RS01735	PF05573	NosL
SHALO_RS01740	PF12679	SHALO_RS01740
SHALO_RS01755	PF00005	ABC transporter
SHALO_RS01760	PF02687	SHALO_RS01760
SHALO_RS01770	PF05573	NosL
SHALO_RS01775	PF00005	ABC transporter
SHALO_RS01780	PF12801	SHALO_RS01780
SHALO_RS01780	PF12838	4Fe-4S dicluster domain
SHALO_RS01785	PF00034	Cytochrome c
SHALO_RS01795	PF12838	4Fe-4S dicluster domain
SHALO_RS01800	PF05048	Periplasmic copper-binding protein (NosD)
SHALO_RS01810	PF00034	Cytochrome c
SHALO_RS01810	PF13473	Cupredoxin-like domain
SHALO_RS01815	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SHALO_RS01815	PF13426	PAS domain
SHALO_RS01820	PF00072	Response regulator receiver domain
SHALO_RS01820	PF00486	Transcriptional regulatory protein, C terminal
SHALO_RS01825	PF13442	Cytochrome C oxidase, cbb3-type, subunit III
SHALO_RS01830	PF00355	Rieske [2Fe-2S] domain
SHALO_RS01835	PF00032	Cytochrome b(C-terminal)/b6/petD
SHALO_RS01835	PF00033	Cytochrome b(N-terminal)/b6/petB
SHALO_RS01840	PF00034	Cytochrome c
SHALO_RS01845	PF00027	Cyclic nucleotide-binding domain
SHALO_RS01850	PF00589	Phage integrase family
SHALO_RS01860	PF00589	Phage integrase family
SHALO_RS01870	PF00255	Glutathione peroxidase
SHALO_RS01875	PF01402	Ribbon-helix-helix protein, copG family
SHALO_RS01880	PF05016	Plasmid stabilisation system protein
SHALO_RS01890	PF02588	SHALO_RS01890
SHALO_RS01890	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
SHALO_RS01895	PF01343	Peptidase family S49
SHALO_RS01900	PF01979	Amidohydrolase family
SHALO_RS01905	PF01220	Dehydroquinase class II
SHALO_RS01910	PF00557	Metallopeptidase family M24
SHALO_RS01915	PF01288	7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
SHALO_RS01920	PF00448	SRP54-type protein, GTPase domain
SHALO_RS01925	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
SHALO_RS01935	PF04542	Sigma-70 region 2
SHALO_RS01935	PF04545	Sigma-70, region 4
SHALO_RS01940	PF01052	Surface presentation of antigens (SPOA)
SHALO_RS01940	PF02154	Flagellar motor switch protein FliM
SHALO_RS01945	PF01052	Surface presentation of antigens (SPOA)
SHALO_RS01950	PF03641	Possible lysine decarboxylase
SHALO_RS01960	PF00535	Glycosyl transferase family 2
SHALO_RS01965	PF08889	SHALO_RS01965
SHALO_RS01970	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
SHALO_RS01975	PF00893	Small Multidrug Resistance protein
SHALO_RS01980	PF13202	EF hand
SHALO_RS01985	PF14358	SHALO_RS01985
SHALO_RS01990	PF13793	N-terminal domain of ribose phosphate pyrophosphokinase
SHALO_RS01990	PF14572	Phosphoribosyl synthetase-associated domain
SHALO_RS01995	PF00009	Elongation factor Tu GTP binding domain
SHALO_RS01995	PF00679	Elongation factor G C-terminus
SHALO_RS01995	PF03144	Elongation factor Tu domain 2
SHALO_RS01995	PF06421	GTP-binding protein LepA C-terminus
SHALO_RS02000	PF00156	Phosphoribosyl transferase domain
SHALO_RS02010	PF01797	Transposase IS200 like
SHALO_RS02015	PF00521	DNA gyrase/topoisomerase IV, subunit A
SHALO_RS02015	PF03989	DNA gyrase C-terminal domain, beta-propeller
SHALO_RS02030	PF00072	Response regulator receiver domain
SHALO_RS02030	PF00158	Sigma-54 interaction domain
SHALO_RS02035	PF01118	Semialdehyde dehydrogenase, NAD binding domain
SHALO_RS02035	PF02774	Semialdehyde dehydrogenase, dimerisation domain
SHALO_RS02040	PF03350	SHALO_RS02040
SHALO_RS02045	PF01208	Uroporphyrinogen decarboxylase (URO-D)
SHALO_RS02050	PF04055	Radical SAM superfamily
SHALO_RS02050	PF13353	4Fe-4S single cluster domain
SHALO_RS02055	PF06808	SHALO_RS02055
SHALO_RS02060	PF16868	SHALO_RS02060
SHALO_RS02070	PF00589	Phage integrase family
SHALO_RS02070	PF13356	Domain of unknown function (DUF4102)
SHALO_RS02075	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SHALO_RS02075	PF13589	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SHALO_RS02090	PF02384	N-6 DNA Methylase
SHALO_RS02095	PF01381	Helix-turn-helix
SHALO_RS02120	PF00353	Hemolysin-type calcium-binding repeat (2 copies)
SHALO_RS02120	PF06594	SHALO_RS02120
SHALO_RS02125	PF00353	Hemolysin-type calcium-binding repeat (2 copies)
SHALO_RS02125	PF06594	SHALO_RS02125
SHALO_RS02130	PF02321	Outer membrane efflux protein
SHALO_RS02135	PF00005	ABC transporter
SHALO_RS02135	PF00664	ABC transporter transmembrane region
SHALO_RS02135	PF03412	Peptidase C39 family
SHALO_RS02140	PF13437	HlyD family secretion protein
SHALO_RS02140	PF13533	Biotin-lipoyl like
SHALO_RS02145	PF00239	Resolvase, N terminal domain
SHALO_RS02155	PF01381	Helix-turn-helix
SHALO_RS02160	PF09681	SHALO_RS02160
SHALO_RS02180	PF00149	Calcineurin-like phosphoesterase
SHALO_RS02185	PF13476	AAA domain
SHALO_RS02190	PF01844	HNH endonuclease
SHALO_RS02195	PF01909	Nucleotidyltransferase domain
SHALO_RS02200	PF11074	SHALO_RS02200
SHALO_RS02205	PF00056	lactate/malate dehydrogenase, NAD binding domain
SHALO_RS02205	PF02866	lactate/malate dehydrogenase, alpha/beta C-terminal domain
SHALO_RS02210	PF07661	SHALO_RS02210
SHALO_RS02215	PF03894	D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase
SHALO_RS02215	PF09363	XFP C-terminal domain
SHALO_RS02215	PF09364	XFP N-terminal domain
SHALO_RS02225	PF02274	Amidinotransferase
SHALO_RS02230	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
SHALO_RS02235	PF01965	DJ-1/PfpI family
SHALO_RS02245	PF05787	Bacterial protein of unknown function (DUF839)
SHALO_RS02250	PF01738	Dienelactone hydrolase family
SHALO_RS02265	PF00563	EAL domain
SHALO_RS02265	PF00990	GGDEF domain
SHALO_RS02280	PF00085	Thioredoxin
SHALO_RS02285	PF14336	Domain of unknown function (DUF4392)
SHALO_RS02290	PF07286	Protein of unknown function (DUF1445)
SHALO_RS02305	PF07366	SnoaL-like polyketide cyclase
SHALO_RS02310	PF00892	EamA-like transporter family
SHALO_RS02315	PF09905	Uncharacterized conserved protein (DUF2132)
SHALO_RS02320	PF00106	short chain dehydrogenase
SHALO_RS02335	PF13458	Periplasmic binding protein
SHALO_RS02340	PF02653	SHALO_RS02340
SHALO_RS02345	PF02653	SHALO_RS02345
SHALO_RS02350	PF00005	ABC transporter
SHALO_RS02350	PF12399	Branched-chain amino acid ATP-binding cassette transporter
SHALO_RS02355	PF00005	ABC transporter
SHALO_RS02360	PF00171	Aldehyde dehydrogenase family
SHALO_RS02360	PF01619	Proline dehydrogenase
SHALO_RS02370	PF03883	SHALO_RS02370
SHALO_RS02395	PF00009	Elongation factor Tu GTP binding domain
SHALO_RS02395	PF03143	Elongation factor Tu C-terminal domain
SHALO_RS02395	PF03144	Elongation factor Tu domain 2
SHALO_RS02400	PF00471	Ribosomal protein L33
SHALO_RS02410	PF02357	Transcription termination factor nusG
SHALO_RS02415	PF00298	Ribosomal protein L11, RNA binding domain
SHALO_RS02415	PF03946	Ribosomal protein L11, N-terminal domain
SHALO_RS02420	PF00687	Ribosomal protein L1p/L10e family
SHALO_RS02425	PF00466	Ribosomal protein L10
SHALO_RS02430	PF00542	Ribosomal protein L7/L12 C-terminal domain
SHALO_RS02430	PF16320	SHALO_RS02430
SHALO_RS02435	PF00562	RNA polymerase Rpb2, domain 6
SHALO_RS02435	PF04560	RNA polymerase Rpb2, domain 7
SHALO_RS02435	PF04561	RNA polymerase Rpb2, domain 2
SHALO_RS02435	PF04563	RNA polymerase beta subunit
SHALO_RS02435	PF04565	RNA polymerase Rpb2, domain 3
SHALO_RS02435	PF10385	RNA polymerase beta subunit external 1 domain
SHALO_RS02440	PF00623	RNA polymerase Rpb1, domain 2
SHALO_RS02440	PF04983	RNA polymerase Rpb1, domain 3
SHALO_RS02440	PF04997	RNA polymerase Rpb1, domain 1
SHALO_RS02440	PF04998	RNA polymerase Rpb1, domain 5
SHALO_RS02440	PF05000	RNA polymerase Rpb1, domain 4
SHALO_RS02445	PF00164	Ribosomal protein S12/S23
SHALO_RS02450	PF00177	Ribosomal protein S7p/S5e
SHALO_RS02455	PF00009	Elongation factor Tu GTP binding domain
SHALO_RS02455	PF00679	Elongation factor G C-terminus
SHALO_RS02455	PF03144	Elongation factor Tu domain 2
SHALO_RS02455	PF03764	Elongation factor G, domain IV
SHALO_RS02455	PF14492	Elongation Factor G, domain II
SHALO_RS02460	PF00005	ABC transporter
SHALO_RS02460	PF09383	NIL domain
SHALO_RS02465	PF00528	Binding-protein-dependent transport system inner membrane component
SHALO_RS02470	PF03180	NLPA lipoprotein
SHALO_RS02480	PF01037	AsnC family
SHALO_RS02480	PF13412	Winged helix-turn-helix DNA-binding
SHALO_RS02485	PF00892	EamA-like transporter family
SHALO_RS02490	PF00248	Aldo/keto reductase family
SHALO_RS02495	PF00881	Nitroreductase family
SHALO_RS02500	PF01554	MatE
SHALO_RS02505	PF00384	Molybdopterin oxidoreductase
SHALO_RS02505	PF01568	Molydopterin dinucleotide binding domain
SHALO_RS02515	PF00072	Response regulator receiver domain
SHALO_RS02515	PF00486	Transcriptional regulatory protein, C terminal
SHALO_RS02520	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
SHALO_RS02525	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SHALO_RS02530	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
SHALO_RS02530	PF13682	Chemoreceptor zinc-binding domain
SHALO_RS02535	PF08447	PAS fold
SHALO_RS02545	PF10588	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
SHALO_RS02545	PF13510	2Fe-2S iron-sulfur cluster binding domain
SHALO_RS02550	PF00146	NADH dehydrogenase
SHALO_RS02555	PF12838	4Fe-4S dicluster domain
SHALO_RS02560	PF00499	NADH-ubiquinone/plastoquinone oxidoreductase chain 6
SHALO_RS02565	PF00420	NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
SHALO_RS02570	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
SHALO_RS02570	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
SHALO_RS02575	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
SHALO_RS02580	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
SHALO_RS02585	PF13643	SHALO_RS02585
SHALO_RS02590	PF01512	Respiratory-chain NADH dehydrogenase 51 Kd subunit
SHALO_RS02590	PF10531	SLBB domain
SHALO_RS02590	PF10589	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
SHALO_RS02595	PF01257	Thioredoxin-like [2Fe-2S] ferredoxin
SHALO_RS02600	PF00329	Respiratory-chain NADH dehydrogenase, 30 Kd subunit
SHALO_RS02600	PF00346	Respiratory-chain NADH dehydrogenase, 49 Kd subunit
SHALO_RS02605	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
SHALO_RS02610	PF00507	NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
SHALO_RS02615	PF03734	L,D-transpeptidase catalytic domain
SHALO_RS02625	PF00842	Alanine racemase, C-terminal domain
SHALO_RS02625	PF01168	Alanine racemase, N-terminal domain
SHALO_RS02630	PF00990	GGDEF domain
SHALO_RS02640	PF02069	Prokaryotic metallothionein
SHALO_RS02645	PF02527	rRNA small subunit methyltransferase G
SHALO_RS02650	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
SHALO_RS02650	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
SHALO_RS02655	PF01741	Large-conductance mechanosensitive channel, MscL
SHALO_RS02655	PF10571	SHALO_RS02655
SHALO_RS02660	PF00583	Acetyltransferase (GNAT) family
SHALO_RS02665	PF00925	GTP cyclohydrolase II
SHALO_RS02670	PF00490	Delta-aminolevulinic acid dehydratase
SHALO_RS02675	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
SHALO_RS02675	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
SHALO_RS02680	PF10788	SHALO_RS02680
SHALO_RS02685	PF04055	Radical SAM superfamily
SHALO_RS02685	PF06969	HemN C-terminal domain
SHALO_RS02690	PF02754	SHALO_RS02690
SHALO_RS02690	PF13534	4Fe-4S dicluster domain
SHALO_RS02695	PF10543	SHALO_RS02695
SHALO_RS02700	PF13289	SHALO_RS02700
SHALO_RS02710	PF02604	Antitoxin Phd_YefM, type II toxin-antitoxin system
SHALO_RS02715	PF05016	Plasmid stabilisation system protein
SHALO_RS02720	PF00497	Bacterial extracellular solute-binding proteins, family 3
SHALO_RS02720	PF00990	GGDEF domain
SHALO_RS02725	PF07690	Major Facilitator Superfamily
SHALO_RS02730	PF02810	SEC-C motif
SHALO_RS02735	PF00027	Cyclic nucleotide-binding domain
SHALO_RS02735	PF13545	Crp-like helix-turn-helix domain
SHALO_RS02740	PF00011	Hsp20/alpha crystallin family
SHALO_RS02745	PF01790	SHALO_RS02745
SHALO_RS02750	PF01127	Succinate dehydrogenase/Fumarate reductase transmembrane subunit
SHALO_RS02755	PF00890	FAD binding domain
SHALO_RS02755	PF02910	Fumarate reductase flavoprotein C-term
SHALO_RS02760	PF13085	2Fe-2S iron-sulfur cluster binding domain
SHALO_RS02760	PF13183	4Fe-4S dicluster domain
SHALO_RS02765	PF00350	Dynamin family
SHALO_RS02770	PF00350	Dynamin family
SHALO_RS02780	PF01594	SHALO_RS02780
SHALO_RS02785	PF05491	Holliday junction DNA helicase ruvB C-terminus
SHALO_RS02785	PF05496	Holliday junction DNA helicase ruvB N-terminus
SHALO_RS02790	PF02548	Ketopantoate hydroxymethyltransferase
SHALO_RS02795	PF01627	Hpt domain
SHALO_RS02800	PF00290	Tryptophan synthase alpha chain
SHALO_RS02805	PF05494	Toluene tolerance, Ttg2
SHALO_RS02810	PF04333	SHALO_RS02810
SHALO_RS02815	PF00318	Ribosomal protein S2
SHALO_RS02820	PF00889	Elongation factor TS
SHALO_RS02825	PF00005	ABC transporter
SHALO_RS02830	PF01311	SHALO_RS02830
SHALO_RS02840	PF00625	Guanylate kinase
SHALO_RS02845	PF02416	mttA/Hcf106 family
SHALO_RS02850	PF00750	tRNA synthetases class I (R)
SHALO_RS02850	PF03485	Arginyl tRNA synthetase N terminal domain
SHALO_RS02850	PF05746	DALR anticodon binding domain
SHALO_RS02855	PF01223	DNA/RNA non-specific endonuclease
SHALO_RS02860	PF00563	EAL domain
SHALO_RS02860	PF00990	GGDEF domain
SHALO_RS02870	PF07715	TonB-dependent Receptor Plug Domain
SHALO_RS02875	PF01475	Ferric uptake regulator family
SHALO_RS02880	PF00034	Cytochrome c
SHALO_RS02880	PF03150	Di-haem cytochrome c peroxidase
SHALO_RS02885	PF01467	Cytidylyltransferase
SHALO_RS02885	PF02410	Oligomerisation domain
SHALO_RS02890	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
SHALO_RS02890	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
SHALO_RS02895	PF00162	Phosphoglycerate kinase
SHALO_RS02900	PF00121	Triosephosphate isomerase
SHALO_RS02905	PF13561	Enoyl-(Acyl carrier protein) reductase
SHALO_RS02910	PF00528	Binding-protein-dependent transport system inner membrane component
SHALO_RS02915	PF08529	NusA N-terminal domain
SHALO_RS02915	PF13184	NusA-like KH domain
SHALO_RS02925	PF00919	Uncharacterized protein family UPF0004
SHALO_RS02925	PF01938	TRAM domain
SHALO_RS02925	PF04055	Radical SAM superfamily
SHALO_RS02930	PF04028	SHALO_RS02930
SHALO_RS02950	PF01171	PP-loop family
SHALO_RS02955	PF00919	Uncharacterized protein family UPF0004
SHALO_RS02955	PF04055	Radical SAM superfamily
SHALO_RS02960	PF02569	Pantoate-beta-alanine ligase
SHALO_RS02965	PF00472	RF-1 domain
SHALO_RS02965	PF03462	PCRF domain
SHALO_RS02980	PF07264	Etoposide-induced protein 2
SHALO_RS02985	PF00710	Asparaginase
SHALO_RS02990	PF13177	DNA polymerase III, delta subunit
SHALO_RS02995	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
SHALO_RS02995	PF07497	Rho termination factor, RNA-binding domain
SHALO_RS02995	PF07498	Rho termination factor, N-terminal domain
SHALO_RS03000	PF01255	Putative undecaprenyl diphosphate synthase
SHALO_RS03005	PF00563	EAL domain
SHALO_RS03005	PF00990	GGDEF domain
SHALO_RS03005	PF08448	PAS fold
SHALO_RS03005	PF12974	ABC transporter, phosphonate, periplasmic substrate-binding protein
SHALO_RS03005	PF13426	PAS domain
SHALO_RS03010	PF03063	Prismane/CO dehydrogenase family
SHALO_RS03015	PF04255	Protein of unknown function (DUF433)
SHALO_RS03030	PF01396	SHALO_RS03030
SHALO_RS03030	PF08378	SHALO_RS03030
SHALO_RS03035	PF03976	Polyphosphate kinase 2 (PPK2)
SHALO_RS03040	PF13275	S4 domain
SHALO_RS03045	PF00355	Rieske [2Fe-2S] domain
SHALO_RS03050	PF00032	Cytochrome b(C-terminal)/b6/petD
SHALO_RS03050	PF00033	Cytochrome b(N-terminal)/b6/petB
SHALO_RS03060	PF03653	SHALO_RS03060
SHALO_RS03065	PF00270	DEAD/DEAH box helicase
SHALO_RS03065	PF00271	Helicase conserved C-terminal domain
SHALO_RS03070	PF02447	SHALO_RS03070
SHALO_RS03075	PF02624	YcaO-like family
SHALO_RS03080	PF00440	Bacterial regulatory proteins, tetR family
SHALO_RS03080	PF14246	AefR-like transcriptional repressor, C-terminal region
SHALO_RS03085	PF02321	Outer membrane efflux protein
SHALO_RS03095	PF07690	Major Facilitator Superfamily
SHALO_RS03100	PF00582	Universal stress protein family
SHALO_RS03115	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SHALO_RS03115	PF08269	Cache domain
SHALO_RS03120	PF00072	Response regulator receiver domain
SHALO_RS03120	PF00486	Transcriptional regulatory protein, C terminal
SHALO_RS03125	PF03480	Bacterial extracellular solute-binding protein, family 7
SHALO_RS03130	PF04290	SHALO_RS03130
SHALO_RS03135	PF06808	SHALO_RS03135
SHALO_RS03140	PF01909	Nucleotidyltransferase domain
SHALO_RS03145	PF01934	Protein of unknown function DUF86
SHALO_RS03150	PF03573	outer membrane porin, OprD family
SHALO_RS03155	PF02604	Antitoxin Phd_YefM, type II toxin-antitoxin system
SHALO_RS03160	PF05016	Plasmid stabilisation system protein
SHALO_RS03165	PF10049	SHALO_RS03165
SHALO_RS03175	PF05016	Plasmid stabilisation system protein
SHALO_RS03180	PF02604	Antitoxin Phd_YefM, type II toxin-antitoxin system
SHALO_RS03185	PF06769	Plasmid encoded toxin Txe
SHALO_RS03190	PF05538	SHALO_RS03190
SHALO_RS03195	PF01909	Nucleotidyltransferase domain
SHALO_RS03205	PF13458	Periplasmic binding protein
SHALO_RS03210	PF02653	SHALO_RS03210
SHALO_RS03215	PF02653	SHALO_RS03215
SHALO_RS03220	PF00005	ABC transporter
SHALO_RS03220	PF12399	Branched-chain amino acid ATP-binding cassette transporter
SHALO_RS03225	PF00005	ABC transporter
SHALO_RS03230	PF01578	SHALO_RS03230
SHALO_RS03230	PF05140	SHALO_RS03230
SHALO_RS03270	PF02464	Competence-damaged protein
SHALO_RS03275	PF00133	tRNA synthetases class I (I, L, M and V)
SHALO_RS03275	PF08264	Anticodon-binding domain of tRNA
SHALO_RS03280	PF01425	Amidase
SHALO_RS03285	PF00478	IMP dehydrogenase / GMP reductase domain
SHALO_RS03285	PF00571	CBS domain
SHALO_RS03290	PF00561	alpha/beta hydrolase fold
SHALO_RS03295	PF02609	Exonuclease VII small subunit
SHALO_RS03300	PF00795	Carbon-nitrogen hydrolase
SHALO_RS03305	PF00899	ThiF family
SHALO_RS03310	PF00155	Aminotransferase class I and II
SHALO_RS03315	PF01225	Mur ligase family, catalytic domain
SHALO_RS03315	PF02875	Mur ligase family, glutamate ligase domain
SHALO_RS03315	PF08245	Mur ligase middle domain
SHALO_RS03325	PF00488	MutS domain V
SHALO_RS03325	PF01713	Smr domain
SHALO_RS03330	PF01546	Peptidase family M20/M25/M40
SHALO_RS03330	PF07687	Peptidase dimerisation domain
SHALO_RS03335	PF01042	Endoribonuclease L-PSP
SHALO_RS03340	PF06039	SHALO_RS03340
SHALO_RS03345	PF13649	Methyltransferase domain
SHALO_RS03355	PF00583	Acetyltransferase (GNAT) family
SHALO_RS03360	PF00595	PDZ domain (Also known as DHR or GLGF)
SHALO_RS03360	PF03572	Peptidase family S41
SHALO_RS03365	PF13690	Chemotaxis phosphatase CheX
SHALO_RS03370	PF00224	Pyruvate kinase, barrel domain
SHALO_RS03370	PF02887	Pyruvate kinase, alpha/beta domain
SHALO_RS03375	PF00829	Ribosomal prokaryotic L21 protein
SHALO_RS03380	PF01016	Ribosomal L27 protein
SHALO_RS03385	PF01018	GTP1/OBG
SHALO_RS03385	PF01926	50S ribosome-binding GTPase
SHALO_RS03390	PF00696	Amino acid kinase family
SHALO_RS03395	PF00551	Formyl transferase
SHALO_RS03395	PF02911	Formyl transferase, C-terminal domain
SHALO_RS03400	PF03099	Biotin/lipoate A/B protein ligase family
SHALO_RS03405	PF13614	AAA domain
SHALO_RS03410	PF02195	ParB-like nuclease domain
SHALO_RS03415	PF00430	ATP synthase B/B' CF(0)
SHALO_RS03420	PF00430	ATP synthase B/B' CF(0)
SHALO_RS03425	PF00213	ATP synthase delta (OSCP) subunit
SHALO_RS03430	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
SHALO_RS03430	PF00306	ATP synthase alpha/beta chain, C terminal domain
SHALO_RS03430	PF02874	ATP synthase alpha/beta family, beta-barrel domain
SHALO_RS03435	PF00231	ATP synthase
SHALO_RS03440	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
SHALO_RS03440	PF02874	ATP synthase alpha/beta family, beta-barrel domain
SHALO_RS03445	PF02823	ATP synthase, Delta/Epsilon chain, beta-sandwich domain
SHALO_RS03450	PF01618	SHALO_RS03450
SHALO_RS03455	PF02472	Biopolymer transport protein ExbD/TolR
SHALO_RS03460	PF13103	TonB C terminal
SHALO_RS03465	PF04052	TolB amino-terminal domain
SHALO_RS03465	PF07676	WD40-like Beta Propeller Repeat
SHALO_RS03470	PF00691	OmpA family
SHALO_RS03475	PF13174	Tetratricopeptide repeat
SHALO_RS03475	PF13432	Tetratricopeptide repeat
SHALO_RS03480	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
SHALO_RS03490	PF00698	Acyl transferase domain
SHALO_RS03495	PF01048	Phosphorylase superfamily
SHALO_RS03500	PF01171	PP-loop family
SHALO_RS03505	PF13114	SHALO_RS03505
SHALO_RS03510	PF00310	Glutamine amidotransferases class-II
SHALO_RS03510	PF01493	GXGXG motif
SHALO_RS03510	PF01645	Conserved region in glutamate synthase
SHALO_RS03510	PF04898	Glutamate synthase central domain
SHALO_RS03515	PF07992	Pyridine nucleotide-disulphide oxidoreductase
SHALO_RS03515	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
SHALO_RS03520	PF00459	Inositol monophosphatase family
SHALO_RS03525	PF01039	Carboxyl transferase domain
SHALO_RS03530	PF02590	Predicted SPOUT methyltransferase
SHALO_RS03535	PF01258	Prokaryotic dksA/traR C4-type zinc finger
SHALO_RS03545	PF01207	Dihydrouridine synthase (Dus)
SHALO_RS03555	PF03547	SHALO_RS03555
SHALO_RS03565	PF01052	Surface presentation of antigens (SPOA)
SHALO_RS03570	PF03960	ArsC family
SHALO_RS03580	PF00132	Bacterial transferase hexapeptide (six repeats)
SHALO_RS03585	PF03547	SHALO_RS03585
SHALO_RS03590	PF01243	Pyridoxamine 5'-phosphate oxidase
SHALO_RS03595	PF04229	GrpB protein
SHALO_RS03610	PF01964	ThiC family
SHALO_RS03610	PF13667	ThiC-associated domain
SHALO_RS03615	PF13690	Chemotaxis phosphatase CheX
SHALO_RS03620	PF00324	Amino acid permease
SHALO_RS03625	PF01925	SHALO_RS03625
SHALO_RS03630	PF00005	ABC transporter
SHALO_RS03635	PF00375	Sodium:dicarboxylate symporter family
SHALO_RS03640	PF00375	Sodium:dicarboxylate symporter family
SHALO_RS03645	PF08668	HDOD domain
SHALO_RS03650	PF00476	DNA polymerase family A
SHALO_RS03650	PF01367	5'-3' exonuclease, C-terminal SAM fold
SHALO_RS03650	PF01612	3'-5' exonuclease
SHALO_RS03650	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
SHALO_RS03655	PF02659	SHALO_RS03655
SHALO_RS03660	PF01863	Protein of unknown function DUF45
SHALO_RS03665	PF00226	DnaJ domain
SHALO_RS03665	PF00684	DnaJ central domain
SHALO_RS03665	PF01556	DnaJ C terminal domain
SHALO_RS03670	PF07813	LTXXQ motif family protein
SHALO_RS03675	PF03595	Voltage-dependent anion channel
SHALO_RS03685	PF14899	SHALO_RS03685
SHALO_RS03690	PF01654	SHALO_RS03690
SHALO_RS03695	PF02322	SHALO_RS03695
SHALO_RS03700	PF00072	Response regulator receiver domain
SHALO_RS03700	PF00486	Transcriptional regulatory protein, C terminal
SHALO_RS03705	PF00672	HAMP domain
SHALO_RS03705	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SHALO_RS03710	PF02132	RecR protein
SHALO_RS03710	PF13662	Toprim domain
SHALO_RS03715	PF00989	PAS fold
SHALO_RS03715	PF00990	GGDEF domain
SHALO_RS03715	PF08448	PAS fold
SHALO_RS03715	PF13426	PAS domain
SHALO_RS03720	PF13453	SHALO_RS03720
SHALO_RS03725	PF00501	AMP-binding enzyme
SHALO_RS03725	PF13193	AMP-binding enzyme C-terminal domain
SHALO_RS03730	PF08501	Shikimate dehydrogenase substrate binding domain
SHALO_RS03735	PF00425	chorismate binding enzyme
SHALO_RS03735	PF04715	Anthranilate synthase component I, N terminal region
SHALO_RS03740	PF05036	Sporulation related domain
SHALO_RS03745	PF08966	Domain of unknown function (DUF1882)
SHALO_RS03750	PF00464	Serine hydroxymethyltransferase
SHALO_RS03755	PF00152	tRNA synthetases class II (D, K and N)
SHALO_RS03755	PF01336	OB-fold nucleic acid binding domain
SHALO_RS03760	PF01475	Ferric uptake regulator family
SHALO_RS03765	PF02674	SHALO_RS03765
SHALO_RS03770	PF00990	GGDEF domain
SHALO_RS03775	PF00437	Type II/IV secretion system protein
SHALO_RS03780	PF02686	Glu-tRNAGln amidotransferase C subunit
SHALO_RS03790	PF13360	PQQ-like domain
SHALO_RS03800	PF03309	Type III pantothenate kinase
SHALO_RS03805	PF01634	ATP phosphoribosyltransferase
SHALO_RS03810	PF00072	Response regulator receiver domain
SHALO_RS03815	PF00072	Response regulator receiver domain
SHALO_RS03815	PF00512	His Kinase A (phospho-acceptor) domain
SHALO_RS03815	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SHALO_RS03815	PF08376	Nitrate and nitrite sensing
SHALO_RS03830	PF01541	GIY-YIG catalytic domain
SHALO_RS03830	PF02151	UvrB/uvrC motif
SHALO_RS03830	PF08459	UvrC Helix-hairpin-helix N-terminal
SHALO_RS03830	PF14520	Helix-hairpin-helix domain
SHALO_RS03840	PF00890	FAD binding domain
SHALO_RS03845	PF03600	Citrate transporter
SHALO_RS03850	PF00117	Glutamine amidotransferase class-I
SHALO_RS03850	PF00958	GMP synthase C terminal domain
SHALO_RS03850	PF02540	NAD synthase
SHALO_RS03855	PF02602	Uroporphyrinogen-III synthase HemD
SHALO_RS03860	PF01071	Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
SHALO_RS03860	PF02843	Phosphoribosylglycinamide synthetase, C domain
SHALO_RS03860	PF02844	Phosphoribosylglycinamide synthetase, N domain
SHALO_RS03865	PF06271	SHALO_RS03865
SHALO_RS03870	PF04453	Organic solvent tolerance protein
SHALO_RS03875	PF00013	KH domain
SHALO_RS03875	PF00575	S1 RNA binding domain
SHALO_RS03875	PF01138	3' exoribonuclease family, domain 1
SHALO_RS03875	PF03725	3' exoribonuclease family, domain 2
SHALO_RS03875	PF03726	Polyribonucleotide nucleotidyltransferase, RNA binding domain
SHALO_RS03880	PF00137	ATP synthase subunit C
SHALO_RS03895	PF00589	Phage integrase family
SHALO_RS03895	PF14659	Phage integrase, N-terminal SAM-like domain
SHALO_RS03900	PF00145	C-5 cytosine-specific DNA methylase
SHALO_RS03910	PF05840	SHALO_RS03910
SHALO_RS03920	PF00263	SHALO_RS03920
SHALO_RS03925	PF05707	Zonular occludens toxin (Zot)
SHALO_RS03965	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SHALO_RS03965	PF04392	ABC transporter substrate binding protein
SHALO_RS03965	PF08448	PAS fold
SHALO_RS03970	PF00072	Response regulator receiver domain
SHALO_RS03970	PF00486	Transcriptional regulatory protein, C terminal
SHALO_RS03975	PF04290	SHALO_RS03975
SHALO_RS03980	PF06808	SHALO_RS03980
SHALO_RS03985	PF01565	FAD binding domain
SHALO_RS03985	PF02754	SHALO_RS03985
SHALO_RS03985	PF02913	FAD linked oxidases, C-terminal domain
SHALO_RS03985	PF13183	4Fe-4S dicluster domain
SHALO_RS03990	PF04277	SHALO_RS03990
SHALO_RS03995	PF00364	Biotin-requiring enzyme
SHALO_RS03995	PF00682	HMGL-like
SHALO_RS03995	PF02436	Conserved carboxylase domain
SHALO_RS04000	PF03977	SHALO_RS04000
SHALO_RS04005	PF01293	Phosphoenolpyruvate carboxykinase
SHALO_RS04010	PF00206	Lyase
SHALO_RS04010	PF14698	Argininosuccinate lyase C-terminal
SHALO_RS04015	PF01230	HIT domain
SHALO_RS04020	PF01409	tRNA synthetases class II core domain (F)
SHALO_RS04020	PF02912	Aminoacyl tRNA synthetase class II, N-terminal domain
SHALO_RS04025	PF01588	Putative tRNA binding domain
SHALO_RS04025	PF03147	Ferredoxin-fold anticodon binding domain
SHALO_RS04025	PF03484	tRNA synthetase B5 domain
SHALO_RS04030	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
SHALO_RS04035	PF02401	LytB protein
SHALO_RS04040	PF00575	S1 RNA binding domain
SHALO_RS04050	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
SHALO_RS04050	PF01842	ACT domain
SHALO_RS04050	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
SHALO_RS04055	PF02321	Outer membrane efflux protein
SHALO_RS04060	PF16576	SHALO_RS04060
SHALO_RS04065	PF00873	AcrB/AcrD/AcrF family
SHALO_RS04070	PF00873	AcrB/AcrD/AcrF family
SHALO_RS04080	PF01132	Elongation factor P (EF-P) OB domain
SHALO_RS04080	PF08207	Elongation factor P (EF-P) KOW-like domain
SHALO_RS04080	PF09285	Elongation factor P, C-terminal
SHALO_RS04085	PF01965	DJ-1/PfpI family
SHALO_RS04090	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
SHALO_RS04090	PF00672	HAMP domain
SHALO_RS04095	PF00488	MutS domain V
SHALO_RS04095	PF01624	MutS domain I
SHALO_RS04095	PF05192	MutS domain III
SHALO_RS04100	PF11026	SHALO_RS04100
SHALO_RS04105	PF13509	S1 domain
SHALO_RS04110	PF03486	HI0933-like protein
SHALO_RS04120	PF03797	Autotransporter beta-domain
SHALO_RS04125	PF00990	GGDEF domain
SHALO_RS04125	PF02743	Cache domain
SHALO_RS04130	PF03653	SHALO_RS04130
SHALO_RS04140	PF01934	Protein of unknown function DUF86
SHALO_RS04145	PF01909	Nucleotidyltransferase domain
SHALO_RS04150	PF00563	EAL domain
SHALO_RS04150	PF00990	GGDEF domain
SHALO_RS04155	PF07859	alpha/beta hydrolase fold
SHALO_RS04160	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
SHALO_RS04165	PF02321	Outer membrane efflux protein
SHALO_RS04175	PF16576	SHALO_RS04175
SHALO_RS04180	PF08447	PAS fold
SHALO_RS04185	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
SHALO_RS04185	PF08269	Cache domain
SHALO_RS04195	PF02811	PHP domain
SHALO_RS04195	PF07733	Bacterial DNA polymerase III alpha subunit
SHALO_RS04195	PF14579	Helix-hairpin-helix motif
SHALO_RS04205	PF00512	His Kinase A (phospho-acceptor) domain
SHALO_RS04205	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SHALO_RS04210	PF00266	Aminotransferase class-V
SHALO_RS04215	PF02386	Cation transport protein
SHALO_RS04220	PF02254	TrkA-N domain
SHALO_RS04235	PF01098	SHALO_RS04235
SHALO_RS04240	PF00849	RNA pseudouridylate synthase
SHALO_RS04240	PF01479	S4 domain
SHALO_RS04250	PF02390	Putative methyltransferase
SHALO_RS04255	PF00005	ABC transporter
SHALO_RS04260	PF02687	SHALO_RS04260
SHALO_RS04265	PF01551	Peptidase family M23
SHALO_RS04270	PF00696	Amino acid kinase family
SHALO_RS04275	PF01192	RNA polymerase Rpb6
SHALO_RS04280	PF02824	TGS domain
SHALO_RS04280	PF04607	Region found in RelA / SpoT proteins
SHALO_RS04280	PF13328	HD domain
SHALO_RS04285	PF00579	tRNA synthetases class I (W and Y)
SHALO_RS04285	PF01479	S4 domain
SHALO_RS04290	PF03060	Nitronate monooxygenase
SHALO_RS04295	PF01520	N-acetylmuramoyl-L-alanine amidase
SHALO_RS04300	PF00994	Probable molybdopterin binding domain
SHALO_RS04305	PF00406	Adenylate kinase
SHALO_RS04310	PF00152	tRNA synthetases class II (D, K and N)
SHALO_RS04310	PF01336	OB-fold nucleic acid binding domain
SHALO_RS04310	PF02938	GAD domain
SHALO_RS04315	PF00990	GGDEF domain
SHALO_RS04320	PF03923	SHALO_RS04320
SHALO_RS04325	PF01513	ATP-NAD kinase
SHALO_RS04330	PF02463	RecF/RecN/SMC N terminal domain
SHALO_RS04335	PF02652	SHALO_RS04335
SHALO_RS04340	PF00072	Response regulator receiver domain
SHALO_RS04340	PF00990	GGDEF domain
SHALO_RS04345	PF01026	TatD related DNase
SHALO_RS04350	PF01464	Transglycosylase SLT domain
SHALO_RS04350	PF01476	LysM domain
SHALO_RS04355	PF03330	Rare lipoprotein A (RlpA)-like double-psi beta-barrel
SHALO_RS04355	PF05036	Sporulation related domain
SHALO_RS04360	PF00475	Imidazoleglycerol-phosphate dehydratase
SHALO_RS04365	PF08282	haloacid dehalogenase-like hydrolase
SHALO_RS04375	PF03968	OstA-like protein
SHALO_RS04380	PF01926	50S ribosome-binding GTPase
SHALO_RS04385	PF00583	Acetyltransferase (GNAT) family
SHALO_RS04395	PF00905	Penicillin binding protein transpeptidase domain
SHALO_RS04395	PF03717	Penicillin-binding Protein dimerisation domain
SHALO_RS04400	PF01965	DJ-1/PfpI family
SHALO_RS04405	PF02130	Uncharacterized protein family UPF0054
SHALO_RS04415	PF01406	tRNA synthetases class I (C) catalytic domain
SHALO_RS04415	PF01588	Putative tRNA binding domain
SHALO_RS04415	PF09334	tRNA synthetases class I (M)
SHALO_RS04425	PF00316	Fructose-1-6-bisphosphatase
SHALO_RS04430	PF03205	Molybdopterin guanine dinucleotide synthesis protein B
SHALO_RS04440	PF01464	Transglycosylase SLT domain
SHALO_RS04445	PF02325	SHALO_RS04445
SHALO_RS04450	PF00749	tRNA synthetases class I (E and Q), catalytic domain
SHALO_RS04455	PF00749	tRNA synthetases class I (E and Q), catalytic domain
SHALO_RS04455	PF02637	GatB domain
SHALO_RS04455	PF03950	tRNA synthetases class I (E and Q), anti-codon binding domain
SHALO_RS04465	PF05538	SHALO_RS04465
SHALO_RS04470	PF00072	Response regulator receiver domain
SHALO_RS04470	PF00486	Transcriptional regulatory protein, C terminal
SHALO_RS04475	PF00939	Sodium:sulfate symporter transmembrane region
SHALO_RS04480	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SHALO_RS04485	PF02743	Cache domain
SHALO_RS04495	PF00072	Response regulator receiver domain
SHALO_RS04495	PF00486	Transcriptional regulatory protein, C terminal
SHALO_RS04500	PF07568	SHALO_RS04500
SHALO_RS04510	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SHALO_RS04510	PF03466	LysR substrate binding domain
SHALO_RS04515	PF00890	FAD binding domain
SHALO_RS04515	PF02910	Fumarate reductase flavoprotein C-term
SHALO_RS04520	PF13085	2Fe-2S iron-sulfur cluster binding domain
SHALO_RS04520	PF13183	4Fe-4S dicluster domain
SHALO_RS04525	PF02754	SHALO_RS04525
SHALO_RS04530	PF13531	Bacterial extracellular solute-binding protein
SHALO_RS04535	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
SHALO_RS04535	PF12729	SHALO_RS04535
SHALO_RS04540	PF01925	SHALO_RS04540
SHALO_RS04545	PF00027	Cyclic nucleotide-binding domain
SHALO_RS04545	PF13545	Crp-like helix-turn-helix domain
SHALO_RS04550	PF03264	NapC/NirT cytochrome c family, N-terminal region
SHALO_RS04555	PF02335	Cytochrome c552
SHALO_RS04560	PF01578	SHALO_RS04560
SHALO_RS04560	PF05140	SHALO_RS04560
SHALO_RS04570	PF00027	Cyclic nucleotide-binding domain
SHALO_RS04570	PF13545	Crp-like helix-turn-helix domain
SHALO_RS04575	PF13675	Type IV pili methyl-accepting chemotaxis transducer N-term
SHALO_RS04580	PF06821	Serine hydrolase
SHALO_RS04585	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SHALO_RS04590	PF00072	Response regulator receiver domain
SHALO_RS04590	PF00486	Transcriptional regulatory protein, C terminal
SHALO_RS04600	PF00890	FAD binding domain
SHALO_RS04605	PF03264	NapC/NirT cytochrome c family, N-terminal region
SHALO_RS04610	PF00239	Resolvase, N terminal domain
SHALO_RS04610	PF02796	Helix-turn-helix domain of resolvase
SHALO_RS04615	PF04172	SHALO_RS04615
SHALO_RS04620	PF03788	SHALO_RS04620
SHALO_RS04625	PF00515	Tetratricopeptide repeat
SHALO_RS04625	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
SHALO_RS04625	PF13181	Tetratricopeptide repeat
SHALO_RS04625	PF13414	TPR repeat
SHALO_RS04630	PF00535	Glycosyl transferase family 2
SHALO_RS04630	PF09837	Uncharacterized protein conserved in bacteria (DUF2064)
SHALO_RS04635	PF01636	Phosphotransferase enzyme family
SHALO_RS04640	PF00581	Rhodanese-like domain
SHALO_RS04645	PF09335	SHALO_RS04645
SHALO_RS04650	PF02754	SHALO_RS04650
SHALO_RS04655	PF09335	SHALO_RS04655
SHALO_RS04660	PF04055	Radical SAM superfamily
SHALO_RS04660	PF13394	4Fe-4S single cluster domain
SHALO_RS04660	PF13847	Methyltransferase domain
SHALO_RS04665	PF00892	EamA-like transporter family
SHALO_RS04670	PF12838	4Fe-4S dicluster domain
SHALO_RS04675	PF06719	SHALO_RS04675
SHALO_RS04675	PF12833	Helix-turn-helix domain
SHALO_RS04680	PF05368	NmrA-like family
SHALO_RS04690	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
SHALO_RS04690	PF12833	Helix-turn-helix domain
SHALO_RS04695	PF00892	EamA-like transporter family
SHALO_RS04700	PF00583	Acetyltransferase (GNAT) family
SHALO_RS04700	PF12802	MarR family
SHALO_RS04705	PF00583	Acetyltransferase (GNAT) family
SHALO_RS04710	PF01411	tRNA synthetases class II (A)
SHALO_RS04710	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
SHALO_RS04720	PF05175	Methyltransferase small domain
SHALO_RS04725	PF01040	UbiA prenyltransferase family
SHALO_RS04730	PF00034	Cytochrome c
SHALO_RS04730	PF00116	Cytochrome C oxidase subunit II, periplasmic domain
SHALO_RS04730	PF02790	Cytochrome C oxidase subunit II, transmembrane domain
SHALO_RS04735	PF03626	SHALO_RS04735
SHALO_RS04740	PF00510	Cytochrome c oxidase subunit III
SHALO_RS04745	PF00115	Cytochrome C and Quinol oxidase polypeptide I
SHALO_RS04755	PF03573	outer membrane porin, OprD family
SHALO_RS04770	PF00384	Molybdopterin oxidoreductase
SHALO_RS04770	PF01568	Molydopterin dinucleotide binding domain
SHALO_RS04770	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
SHALO_RS04770	PF10518	TAT (twin-arginine translocation) pathway signal sequence
SHALO_RS04775	PF12800	4Fe-4S binding domain
SHALO_RS04775	PF12838	4Fe-4S dicluster domain
SHALO_RS04780	PF12801	SHALO_RS04780
SHALO_RS04780	PF13237	4Fe-4S dicluster domain
SHALO_RS04785	PF03892	Nitrate reductase cytochrome c-type subunit (NapB)
SHALO_RS04790	PF00037	4Fe-4S binding domain
SHALO_RS04790	PF12838	4Fe-4S dicluster domain
SHALO_RS04800	PF03927	NapD protein
SHALO_RS04805	PF08447	PAS fold
SHALO_RS04810	PF01926	50S ribosome-binding GTPase
SHALO_RS04810	PF06071	Protein of unknown function (DUF933)
SHALO_RS04820	PF03929	SHALO_RS04820
SHALO_RS04830	PF00593	TonB dependent receptor
SHALO_RS04830	PF07715	TonB-dependent Receptor Plug Domain
SHALO_RS04835	PF04773	FecR protein
SHALO_RS04835	PF16344	SHALO_RS04835
SHALO_RS04840	PF04542	Sigma-70 region 2
SHALO_RS04840	PF08281	Sigma-70, region 4
SHALO_RS04845	PF00581	Rhodanese-like domain
SHALO_RS04845	PF02943	Ferredoxin thioredoxin reductase catalytic beta chain
SHALO_RS04850	PF02613	Nitrate reductase delta subunit
SHALO_RS04855	PF00384	Molybdopterin oxidoreductase
SHALO_RS04855	PF01568	Molydopterin dinucleotide binding domain
SHALO_RS04855	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
SHALO_RS04860	PF13247	4Fe-4S dicluster domain
SHALO_RS04870	PF00072	Response regulator receiver domain
SHALO_RS04870	PF00486	Transcriptional regulatory protein, C terminal
SHALO_RS04875	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
SHALO_RS04880	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SHALO_RS04885	PF00034	Cytochrome c
SHALO_RS04890	PF00355	Rieske [2Fe-2S] domain
SHALO_RS04895	PF00032	Cytochrome b(C-terminal)/b6/petD
SHALO_RS04895	PF00033	Cytochrome b(N-terminal)/b6/petB
SHALO_RS04900	PF00034	Cytochrome c
SHALO_RS04905	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
SHALO_RS04910	PF03573	outer membrane porin, OprD family
SHALO_RS04915	PF00563	EAL domain
SHALO_RS04915	PF08447	PAS fold
SHALO_RS04920	PF02666	SHALO_RS04920
SHALO_RS04925	PF00270	DEAD/DEAH box helicase
SHALO_RS04925	PF00271	Helicase conserved C-terminal domain
SHALO_RS04925	PF03880	DbpA RNA binding domain
SHALO_RS04930	PF12746	GNAT acetyltransferase
SHALO_RS04935	PF08348	SHALO_RS04935
SHALO_RS04935	PF13309	SHALO_RS04935
SHALO_RS04940	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
SHALO_RS04940	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
SHALO_RS04945	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
SHALO_RS04950	PF00682	HMGL-like
SHALO_RS04955	PF08241	Methyltransferase domain
SHALO_RS04960	PF01810	SHALO_RS04960
SHALO_RS04965	PF00072	Response regulator receiver domain
SHALO_RS04965	PF01966	HD domain
SHALO_RS04965	PF08447	PAS fold
SHALO_RS04970	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
SHALO_RS04970	PF12729	SHALO_RS04970
SHALO_RS04975	PF12844	Helix-turn-helix domain
SHALO_RS04980	PF06629	SHALO_RS04980
SHALO_RS04985	PF07730	Histidine kinase
SHALO_RS04985	PF13581	Histidine kinase-like ATPase domain
SHALO_RS04990	PF00072	Response regulator receiver domain
SHALO_RS04990	PF00196	Bacterial regulatory proteins, luxR family
SHALO_RS04995	PF00753	Metallo-beta-lactamase superfamily
SHALO_RS04995	PF14863	Alkyl sulfatase dimerisation
SHALO_RS05000	PF02525	Flavodoxin-like fold
SHALO_RS05005	PF01047	MarR family
SHALO_RS05010	PF01709	Transcriptional regulator
SHALO_RS05015	PF02589	Uncharacterised ACR, YkgG family COG1556
SHALO_RS05020	PF16868	SHALO_RS05020
SHALO_RS05025	PF06808	SHALO_RS05025
SHALO_RS05030	PF08905	SHALO_RS05030
SHALO_RS05035	PF02588	SHALO_RS05035
SHALO_RS05035	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
SHALO_RS05045	PF00118	TCP-1/cpn60 chaperonin family
SHALO_RS05050	PF00166	Chaperonin 10 Kd subunit
SHALO_RS05060	PF00589	Phage integrase family
SHALO_RS05070	PF14297	SHALO_RS05070
SHALO_RS05110	PF00004	ATPase family associated with various cellular activities (AAA)
SHALO_RS05115	PF00082	Subtilase family
SHALO_RS05125	PF00589	Phage integrase family
SHALO_RS05165	PF04471	Restriction endonuclease
SHALO_RS05190	PF02661	Fic/DOC family
SHALO_RS05195	PF01381	Helix-turn-helix
SHALO_RS05205	PF05981	SHALO_RS05205
SHALO_RS05210	PF00563	EAL domain
SHALO_RS05210	PF00990	GGDEF domain
SHALO_RS05215	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
SHALO_RS05220	PF00072	Response regulator receiver domain
SHALO_RS05220	PF00486	Transcriptional regulatory protein, C terminal
SHALO_RS05225	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SHALO_RS05225	PF07695	SHALO_RS05225
SHALO_RS05225	PF07696	7TMR-DISM extracellular 2
SHALO_RS05230	PF02321	Outer membrane efflux protein
SHALO_RS05235	PF06035	Bacterial transglutaminase-like cysteine proteinase BTLCP
SHALO_RS05240	PF00563	EAL domain
SHALO_RS05240	PF00990	GGDEF domain
SHALO_RS05240	PF16448	SHALO_RS05240
SHALO_RS05245	PF00005	ABC transporter
SHALO_RS05245	PF00664	ABC transporter transmembrane region
SHALO_RS05250	PF13437	HlyD family secretion protein
SHALO_RS05250	PF13533	Biotin-lipoyl like
SHALO_RS05255	PF00196	Bacterial regulatory proteins, luxR family
SHALO_RS05260	PF00353	Hemolysin-type calcium-binding repeat (2 copies)
SHALO_RS05265	PF06035	Bacterial transglutaminase-like cysteine proteinase BTLCP
SHALO_RS05270	PF01841	Transglutaminase-like superfamily
SHALO_RS05270	PF08379	SHALO_RS05270
SHALO_RS05270	PF09899	SHALO_RS05270
SHALO_RS05275	PF04168	SHALO_RS05275
SHALO_RS05275	PF14403	SHALO_RS05275
SHALO_RS05280	PF01841	Transglutaminase-like superfamily
SHALO_RS05280	PF08379	SHALO_RS05280
SHALO_RS05285	PF05015	Plasmid maintenance system killer protein
SHALO_RS05290	PF01381	Helix-turn-helix
SHALO_RS05300	PF04952	Succinylglutamate desuccinylase / Aspartoacylase family
SHALO_RS05305	PF04952	Succinylglutamate desuccinylase / Aspartoacylase family
SHALO_RS05310	PF01841	Transglutaminase-like superfamily
SHALO_RS05310	PF08379	SHALO_RS05310
SHALO_RS05315	PF04168	SHALO_RS05315
SHALO_RS05320	PF14403	SHALO_RS05320
SHALO_RS05335	PF06738	SHALO_RS05335
SHALO_RS05340	PF12821	SHALO_RS05340
SHALO_RS05345	PF01814	Hemerythrin HHE cation binding domain
SHALO_RS05350	PF00122	E1-E2 ATPase
SHALO_RS05350	PF00702	haloacid dehalogenase-like hydrolase
SHALO_RS05355	PF01022	Bacterial regulatory protein, arsR family
SHALO_RS05365	PF13250	SHALO_RS05365
SHALO_RS05365	PF13455	SHALO_RS05365
SHALO_RS05370	PF00464	Serine hydroxymethyltransferase
SHALO_RS05375	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
SHALO_RS05375	PF12833	Helix-turn-helix domain
SHALO_RS05380	PF12833	Helix-turn-helix domain
SHALO_RS05385	PF02627	Carboxymuconolactone decarboxylase family
SHALO_RS05390	PF06739	SHALO_RS05390
SHALO_RS05395	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
SHALO_RS05400	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
SHALO_RS05400	PF00672	HAMP domain
SHALO_RS05400	PF02743	Cache domain
SHALO_RS05405	PF02581	Thiamine monophosphate synthase/TENI
SHALO_RS05410	PF01757	SHALO_RS05410
SHALO_RS05415	PF02915	Rubrerythrin
SHALO_RS05420	PF03006	SHALO_RS05420
SHALO_RS05430	PF01810	SHALO_RS05430
SHALO_RS05435	PF02754	SHALO_RS05435
SHALO_RS05440	PF02589	Uncharacterised ACR, YkgG family COG1556
SHALO_RS05440	PF13183	4Fe-4S dicluster domain
SHALO_RS05445	PF02589	Uncharacterised ACR, YkgG family COG1556
SHALO_RS05450	PF00892	EamA-like transporter family
SHALO_RS05455	PF13472	GDSL-like Lipase/Acylhydrolase family
SHALO_RS05465	PF00027	Cyclic nucleotide-binding domain
SHALO_RS05465	PF00571	CBS domain
SHALO_RS05465	PF03445	SHALO_RS05465
SHALO_RS05465	PF10335	SHALO_RS05465
SHALO_RS05470	PF00929	Exonuclease
SHALO_RS05480	PF01717	Cobalamin-independent synthase, Catalytic domain
SHALO_RS05480	PF08267	Cobalamin-independent synthase, N-terminal domain
SHALO_RS05490	PF01435	Peptidase family M48
SHALO_RS05495	PF07883	Cupin domain
SHALO_RS05500	PF06821	Serine hydrolase
SHALO_RS05505	PF00857	Isochorismatase family
SHALO_RS05510	PF01739	CheR methyltransferase, SAM binding domain
SHALO_RS05515	PF01339	CheB methylesterase
SHALO_RS05520	PF00883	Cytosol aminopeptidase family, catalytic domain
SHALO_RS05520	PF02789	Cytosol aminopeptidase family, N-terminal domain
SHALO_RS05525	PF09335	SHALO_RS05525
SHALO_RS05530	PF00291	Pyridoxal-phosphate dependent enzyme
SHALO_RS05535	PF00156	Phosphoribosyl transferase domain
SHALO_RS05545	PF02502	Ribose/Galactose Isomerase
SHALO_RS05550	PF02163	Peptidase family M50
SHALO_RS05555	PF00717	Peptidase S24-like
SHALO_RS05560	PF00763	Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
SHALO_RS05560	PF02882	Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
SHALO_RS05570	PF00202	Aminotransferase class-III
SHALO_RS05575	PF09527	SHALO_RS05575
SHALO_RS05585	PF04055	Radical SAM superfamily
SHALO_RS05590	PF00675	Insulinase (Peptidase family M16)
SHALO_RS05590	PF05193	Peptidase M16 inactive domain
SHALO_RS05595	PF00270	DEAD/DEAH box helicase
SHALO_RS05595	PF00271	Helicase conserved C-terminal domain
SHALO_RS05600	PF02482	Sigma 54 modulation protein / S30EA ribosomal protein
SHALO_RS05600	PF16321	SHALO_RS05600
SHALO_RS05610	PF07963	Prokaryotic N-terminal methylation motif
SHALO_RS05620	PF03160	Calx-beta domain
SHALO_RS05625	PF02623	FliW protein
SHALO_RS05630	PF13525	Outer membrane lipoprotein
SHALO_RS05635	PF00004	ATPase family associated with various cellular activities (AAA)
SHALO_RS05635	PF02190	ATP-dependent protease La (LON) domain
SHALO_RS05635	PF05362	Lon protease (S16) C-terminal proteolytic domain
SHALO_RS05640	PF01084	Ribosomal protein S18
SHALO_RS05645	PF00436	Single-strand binding protein family
SHALO_RS05650	PF01250	Ribosomal protein S6
SHALO_RS05655	PF06144	DNA polymerase III, delta subunit
SHALO_RS05660	PF00773	RNB domain
SHALO_RS05665	PF08668	HDOD domain
SHALO_RS05670	PF01450	Acetohydroxy acid isomeroreductase, catalytic domain
SHALO_RS05670	PF07991	Acetohydroxy acid isomeroreductase, catalytic domain
SHALO_RS05675	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
SHALO_RS05680	PF03776	Septum formation topological specificity factor MinE
SHALO_RS05685	PF04748	Divergent polysaccharide deacetylase
SHALO_RS05690	PF02481	DNA recombination-mediator protein A
SHALO_RS05695	PF01925	SHALO_RS05695
SHALO_RS05700	PF04073	Aminoacyl-tRNA editing domain
SHALO_RS05715	PF03313	SHALO_RS05715
SHALO_RS05715	PF03315	Serine dehydratase beta chain
SHALO_RS05720	PF03652	Uncharacterised protein family (UPF0081)
SHALO_RS05725	PF03458	SHALO_RS05725
SHALO_RS05730	PF00202	Aminotransferase class-III
SHALO_RS05735	PF02636	Putative S-adenosyl-L-methionine-dependent methyltransferase
SHALO_RS05740	PF02597	ThiS family
SHALO_RS05745	PF01648	4'-phosphopantetheinyl transferase superfamily
SHALO_RS05750	PF03748	SHALO_RS05750
SHALO_RS05755	PF13481	AAA domain
SHALO_RS05755	PF13541	Subunit ChlI of Mg-chelatase
SHALO_RS05760	PF00448	SRP54-type protein, GTPase domain
SHALO_RS05765	PF13905	Thioredoxin-like
SHALO_RS05770	PF01812	5-formyltetrahydrofolate cyclo-ligase family
SHALO_RS05775	PF01966	HD domain
SHALO_RS05775	PF12072	SHALO_RS05775
SHALO_RS05780	PF00005	ABC transporter
SHALO_RS05780	PF00664	ABC transporter transmembrane region
SHALO_RS05785	PF04366	SHALO_RS05785
SHALO_RS05790	PF09335	SHALO_RS05790
SHALO_RS05795	PF00717	Peptidase S24-like
SHALO_RS05800	PF01758	Sodium Bile acid symporter family
SHALO_RS05805	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
SHALO_RS05815	PF00072	Response regulator receiver domain
SHALO_RS05815	PF00989	PAS fold
SHALO_RS05820	PF00072	Response regulator receiver domain
SHALO_RS05820	PF00486	Transcriptional regulatory protein, C terminal
SHALO_RS05825	PF00072	Response regulator receiver domain
SHALO_RS05825	PF00563	EAL domain
SHALO_RS05825	PF00990	GGDEF domain
SHALO_RS05830	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SHALO_RS05830	PF02743	Cache domain
SHALO_RS05835	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SHALO_RS05840	PF08495	SHALO_RS05840
SHALO_RS05840	PF10442	SHALO_RS05840
SHALO_RS05845	PF04073	Aminoacyl-tRNA editing domain
SHALO_RS05870	PF12833	Helix-turn-helix domain
SHALO_RS05880	PF01850	PIN domain
SHALO_RS05890	PF00145	C-5 cytosine-specific DNA methylase
SHALO_RS05895	PF00589	Phage integrase family
SHALO_RS05895	PF14659	Phage integrase, N-terminal SAM-like domain
SHALO_RS05910	PF00925	GTP cyclohydrolase II
SHALO_RS05910	PF00926	3,4-dihydroxy-2-butanone 4-phosphate synthase
SHALO_RS05915	PF00999	Sodium/hydrogen exchanger family
SHALO_RS05915	PF02254	TrkA-N domain
SHALO_RS05920	PF00512	His Kinase A (phospho-acceptor) domain
SHALO_RS05920	PF00672	HAMP domain
SHALO_RS05925	PF00149	Calcineurin-like phosphoesterase
SHALO_RS05930	PF04264	YceI-like domain
SHALO_RS05940	PF00115	Cytochrome C and Quinol oxidase polypeptide I
SHALO_RS05945	PF00005	ABC transporter
SHALO_RS05950	PF02687	SHALO_RS05950
SHALO_RS05950	PF12704	MacB-like periplasmic core domain
SHALO_RS05955	PF00929	Exonuclease
SHALO_RS05960	PF13589	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SHALO_RS05965	PF00872	SHALO_RS05965
SHALO_RS05970	PF07804	HipA-like C-terminal domain
SHALO_RS05970	PF07805	HipA-like N-terminal domain
SHALO_RS05970	PF13657	HipA N-terminal domain
SHALO_RS05975	PF12844	Helix-turn-helix domain
SHALO_RS05985	PF13899	Thioredoxin-like
SHALO_RS05990	PF01327	Polypeptide deformylase
SHALO_RS05995	PF03061	Thioesterase superfamily
SHALO_RS06005	PF03167	Uracil DNA glycosylase superfamily
SHALO_RS06010	PF13855	Leucine rich repeat
SHALO_RS06020	PF00682	HMGL-like
SHALO_RS06025	PF02579	Dinitrogenase iron-molybdenum cofactor
SHALO_RS06025	PF04055	Radical SAM superfamily
SHALO_RS06030	PF01966	HD domain
SHALO_RS06030	PF13185	GAF domain
SHALO_RS06035	PF00072	Response regulator receiver domain
SHALO_RS06035	PF00486	Transcriptional regulatory protein, C terminal
SHALO_RS06040	PF00072	Response regulator receiver domain
SHALO_RS06040	PF00563	EAL domain
SHALO_RS06040	PF00990	GGDEF domain
SHALO_RS06045	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SHALO_RS06045	PF13426	PAS domain
SHALO_RS06050	PF00072	Response regulator receiver domain
SHALO_RS06055	PF00258	Flavodoxin
SHALO_RS06055	PF00753	Metallo-beta-lactamase superfamily
SHALO_RS06060	PF02579	Dinitrogenase iron-molybdenum cofactor
SHALO_RS06065	PF13187	4Fe-4S dicluster domain
SHALO_RS06070	PF00148	Nitrogenase component 1 type Oxidoreductase
SHALO_RS06075	PF00148	Nitrogenase component 1 type Oxidoreductase
SHALO_RS06080	PF02574	Homocysteine S-methyltransferase
SHALO_RS06085	PF00171	Aldehyde dehydrogenase family
SHALO_RS06090	PF00924	Mechanosensitive ion channel
SHALO_RS06095	PF00210	Ferritin-like domain
SHALO_RS06100	PF01584	CheW-like domain
SHALO_RS06105	PF02579	Dinitrogenase iron-molybdenum cofactor
SHALO_RS06110	PF03270	Protein of unknown function, DUF269
SHALO_RS06115	PF00258	Flavodoxin
SHALO_RS06120	PF03206	SHALO_RS06120
SHALO_RS06125	PF04319	SHALO_RS06125
SHALO_RS06135	PF00111	2Fe-2S iron-sulfur cluster binding domain
SHALO_RS06140	PF00309	SHALO_RS06140
SHALO_RS06140	PF04552	Sigma-54, DNA binding domain
SHALO_RS06140	PF04963	Sigma-54 factor, core binding domain
SHALO_RS06145	PF04891	SHALO_RS06145
SHALO_RS06150	PF13420	Acetyltransferase (GNAT) domain
SHALO_RS06160	PF01850	PIN domain
SHALO_RS06170	PF02498	SHALO_RS06170
SHALO_RS06175	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
SHALO_RS06185	PF05167	Uncharacterised ACR (DUF711)
SHALO_RS06190	PF10136	SHALO_RS06190
SHALO_RS06195	PF00905	Penicillin binding protein transpeptidase domain
SHALO_RS06200	PF00563	EAL domain
SHALO_RS06200	PF00990	GGDEF domain
SHALO_RS06200	PF02743	Cache domain
SHALO_RS06210	PF00691	OmpA family
SHALO_RS06215	PF01618	SHALO_RS06215
SHALO_RS06220	PF05235	CHAD domain
SHALO_RS06225	PF01863	Protein of unknown function DUF45
SHALO_RS06230	PF00583	Acetyltransferase (GNAT) family
SHALO_RS06235	PF04221	RelB antitoxin
SHALO_RS06240	PF15738	SHALO_RS06240
SHALO_RS06250	PF02567	Phenazine biosynthesis-like protein
SHALO_RS06255	PF04773	FecR protein
SHALO_RS06260	PF00691	OmpA family
SHALO_RS06270	PF00561	alpha/beta hydrolase fold
SHALO_RS06275	PF00892	EamA-like transporter family
SHALO_RS06280	PF13536	Multidrug resistance efflux transporter
SHALO_RS06290	PF00990	GGDEF domain
SHALO_RS06295	PF00990	GGDEF domain
SHALO_RS06300	PF00155	Aminotransferase class I and II
SHALO_RS06300	PF00392	Bacterial regulatory proteins, gntR family
SHALO_RS06305	PF01243	Pyridoxamine 5'-phosphate oxidase
SHALO_RS06310	PF12900	Pyridoxamine 5'-phosphate oxidase
SHALO_RS06315	PF11059	SHALO_RS06315
SHALO_RS06320	PF01063	Aminotransferase class IV
SHALO_RS06330	PF14022	SHALO_RS06330
SHALO_RS06340	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
SHALO_RS06340	PF00672	HAMP domain
SHALO_RS06340	PF02743	Cache domain
SHALO_RS06345	PF00384	Molybdopterin oxidoreductase
SHALO_RS06345	PF01568	Molydopterin dinucleotide binding domain
SHALO_RS06355	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SHALO_RS06360	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
SHALO_RS06365	PF00072	Response regulator receiver domain
SHALO_RS06365	PF00486	Transcriptional regulatory protein, C terminal
SHALO_RS06370	PF01042	Endoribonuclease L-PSP
SHALO_RS06375	PF13302	Acetyltransferase (GNAT) domain
SHALO_RS06385	PF00142	4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family
SHALO_RS06395	PF00148	Nitrogenase component 1 type Oxidoreductase
SHALO_RS06400	PF00148	Nitrogenase component 1 type Oxidoreductase
SHALO_RS06400	PF11844	Domain of unknown function (DUF3364)
SHALO_RS06410	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SHALO_RS06415	PF00072	Response regulator receiver domain
SHALO_RS06425	PF00072	Response regulator receiver domain
SHALO_RS06430	PF00732	GMC oxidoreductase
SHALO_RS06430	PF05199	GMC oxidoreductase
SHALO_RS06435	PF13618	SHALO_RS06435
SHALO_RS06445	PF07681	SHALO_RS06445
SHALO_RS06450	PF00072	Response regulator receiver domain
SHALO_RS06450	PF00486	Transcriptional regulatory protein, C terminal
SHALO_RS06455	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SHALO_RS06460	PF00583	Acetyltransferase (GNAT) family
SHALO_RS06460	PF00795	Carbon-nitrogen hydrolase
SHALO_RS06465	PF00075	RNase H
SHALO_RS06475	PF04972	BON domain
SHALO_RS06480	PF13181	Tetratricopeptide repeat
SHALO_RS06490	PF00072	Response regulator receiver domain
SHALO_RS06490	PF00486	Transcriptional regulatory protein, C terminal
SHALO_RS06495	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SHALO_RS06495	PF08495	SHALO_RS06495
SHALO_RS06495	PF10442	SHALO_RS06495
SHALO_RS06505	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
SHALO_RS06510	PF07992	Pyridine nucleotide-disulphide oxidoreductase
SHALO_RS06510	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
SHALO_RS06515	PF01155	Hydrogenase expression/synthesis hypA family
SHALO_RS06520	PF13247	4Fe-4S dicluster domain
SHALO_RS06525	PF00346	Respiratory-chain NADH dehydrogenase, 49 Kd subunit
SHALO_RS06525	PF00374	Nickel-dependent hydrogenase
SHALO_RS06530	PF00329	Respiratory-chain NADH dehydrogenase, 30 Kd subunit
SHALO_RS06535	PF13187	4Fe-4S dicluster domain
SHALO_RS06540	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
SHALO_RS06545	PF01966	HD domain
SHALO_RS06550	PF01936	NYN domain
SHALO_RS06550	PF12872	OST-HTH/LOTUS domain
SHALO_RS06555	PF05977	Transmembrane secretion effector
SHALO_RS06560	PF04365	Protein of unknown function (DUF497)
SHALO_RS06570	PF02589	Uncharacterised ACR, YkgG family COG1556
SHALO_RS06575	PF02589	Uncharacterised ACR, YkgG family COG1556
SHALO_RS06575	PF02754	SHALO_RS06575
SHALO_RS06575	PF13183	4Fe-4S dicluster domain
SHALO_RS06585	PF00155	Aminotransferase class I and II
SHALO_RS06590	PF02492	CobW/HypB/UreG, nucleotide-binding domain
SHALO_RS06590	PF07683	Cobalamin synthesis protein cobW C-terminal domain
SHALO_RS06595	PF04328	SHALO_RS06595
SHALO_RS06600	PF02554	SHALO_RS06600
SHALO_RS06600	PF13722	SHALO_RS06600
SHALO_RS06605	PF00248	Aldo/keto reductase family
SHALO_RS06610	PF00890	FAD binding domain
SHALO_RS06610	PF02910	Fumarate reductase flavoprotein C-term
SHALO_RS06615	PF06988	NifT/FixU protein
SHALO_RS06620	PF00158	Sigma-54 interaction domain
SHALO_RS06620	PF13185	GAF domain
SHALO_RS06625	PF13289	SHALO_RS06625
SHALO_RS06630	PF01880	Desulfoferrodoxin
SHALO_RS06645	PF00586	AIR synthase related protein, N-terminal domain
SHALO_RS06650	PF01142	tRNA pseudouridine synthase D (TruD)
SHALO_RS06660	PF00999	Sodium/hydrogen exchanger family
SHALO_RS06665	PF00563	EAL domain
SHALO_RS06665	PF00990	GGDEF domain
SHALO_RS06665	PF08269	Cache domain
SHALO_RS06665	PF08448	PAS fold
SHALO_RS06670	PF01381	Helix-turn-helix
SHALO_RS06675	PF00990	GGDEF domain
SHALO_RS06685	PF08543	Phosphomethylpyrimidine kinase
SHALO_RS06690	PF02133	Permease for cytosine/purines, uracil, thiamine, allantoin
SHALO_RS06695	PF02110	Hydroxyethylthiazole kinase family
SHALO_RS06700	PF00210	Ferritin-like domain
SHALO_RS06705	PF02535	SHALO_RS06705
SHALO_RS06710	PF01381	Helix-turn-helix
SHALO_RS06715	PF00990	GGDEF domain
SHALO_RS06715	PF01966	HD domain
SHALO_RS06720	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
SHALO_RS06720	PF13682	Chemoreceptor zinc-binding domain
SHALO_RS06725	PF12706	Beta-lactamase superfamily domain
SHALO_RS06735	PF00005	ABC transporter
SHALO_RS06735	PF12848	ABC transporter
SHALO_RS06740	PF00691	OmpA family
SHALO_RS06740	PF13677	SHALO_RS06740
SHALO_RS06745	PF01618	SHALO_RS06745
SHALO_RS06750	PF00440	Bacterial regulatory proteins, tetR family
SHALO_RS06750	PF14246	AefR-like transcriptional repressor, C-terminal region
SHALO_RS06755	PF16576	SHALO_RS06755
SHALO_RS06760	PF00873	AcrB/AcrD/AcrF family
SHALO_RS06765	PF02321	Outer membrane efflux protein
SHALO_RS06770	PF13566	SHALO_RS06770
SHALO_RS06780	PF00881	Nitroreductase family
SHALO_RS06785	PF00881	Nitroreductase family
SHALO_RS06800	PF00875	DNA photolyase
SHALO_RS06800	PF03441	FAD binding domain of DNA photolyase
SHALO_RS06805	PF04463	SHALO_RS06805
SHALO_RS06805	PF08349	SHALO_RS06805
SHALO_RS06815	PF00501	AMP-binding enzyme
SHALO_RS06815	PF14535	AMP-binding enzyme C-terminal domain
SHALO_RS06825	PF00501	AMP-binding enzyme
SHALO_RS06825	PF14535	AMP-binding enzyme C-terminal domain
SHALO_RS06830	PF01558	Pyruvate ferredoxin/flavodoxin oxidoreductase
SHALO_RS06835	PF01855	Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg
SHALO_RS06835	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
SHALO_RS06840	PF00474	Sodium:solute symporter family
SHALO_RS06850	PF02561	Flagellar protein FliS
SHALO_RS06855	PF02465	SHALO_RS06855
SHALO_RS06855	PF07195	SHALO_RS06855
SHALO_RS06860	PF03646	FlaG protein
SHALO_RS06870	PF03602	Conserved hypothetical protein 95
SHALO_RS06875	PF02119	SHALO_RS06875
SHALO_RS06880	PF10135	SHALO_RS06880
SHALO_RS06885	PF04316	Anti-sigma-28 factor, FlgM
SHALO_RS06895	PF00460	Flagella basal body rod protein
SHALO_RS06895	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
SHALO_RS06900	PF00528	Binding-protein-dependent transport system inner membrane component
SHALO_RS06905	PF09674	SHALO_RS06905
SHALO_RS06910	PF00916	SHALO_RS06910
SHALO_RS06910	PF01740	STAS domain
SHALO_RS06915	PF01361	Tautomerase enzyme
SHALO_RS06920	PF00119	ATP synthase A chain
SHALO_RS06930	PF02581	Thiamine monophosphate synthase/TENI
SHALO_RS06935	PF02637	GatB domain
SHALO_RS06935	PF02934	GatB/GatE catalytic domain
SHALO_RS06940	PF01210	NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
SHALO_RS06940	PF07479	NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
SHALO_RS06945	PF00933	Glycosyl hydrolase family 3 N terminal domain
SHALO_RS06950	PF00449	Urease alpha-subunit, N-terminal domain
SHALO_RS06950	PF01979	Amidohydrolase family
SHALO_RS06955	PF01416	tRNA pseudouridine synthase
SHALO_RS06960	PF03739	SHALO_RS06960
SHALO_RS06965	PF01478	Type IV leader peptidase family
SHALO_RS06965	PF06750	SHALO_RS06965
SHALO_RS06975	PF02441	Flavoprotein
SHALO_RS06975	PF04127	DNA / pantothenate metabolism flavoprotein
SHALO_RS06980	PF00132	Bacterial transferase hexapeptide (six repeats)
SHALO_RS06980	PF12804	MobA-like NTP transferase domain
SHALO_RS06985	PF00813	SHALO_RS06985
SHALO_RS06990	PF01263	Aldose 1-epimerase
SHALO_RS06995	PF01638	HxlR-like helix-turn-helix
SHALO_RS07000	PF02525	Flavodoxin-like fold
SHALO_RS07010	PF01910	Domain of unknown function DUF77
SHALO_RS07015	PF02308	SHALO_RS07015
SHALO_RS07015	PF13194	SHALO_RS07015
SHALO_RS07020	PF04055	Radical SAM superfamily
SHALO_RS07020	PF08497	SHALO_RS07020
SHALO_RS07025	PF00342	Phosphoglucose isomerase
SHALO_RS07035	PF00440	Bacterial regulatory proteins, tetR family
SHALO_RS07040	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
SHALO_RS07040	PF14720	NiFe/NiFeSe hydrogenase small subunit C-terminal
SHALO_RS07045	PF00374	Nickel-dependent hydrogenase
SHALO_RS07050	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
SHALO_RS07050	PF10518	TAT (twin-arginine translocation) pathway signal sequence
SHALO_RS07050	PF14720	NiFe/NiFeSe hydrogenase small subunit C-terminal
SHALO_RS07055	PF00374	Nickel-dependent hydrogenase
SHALO_RS07060	PF01292	Prokaryotic cytochrome b561
SHALO_RS07065	PF01750	Hydrogenase maturation protease
SHALO_RS07075	PF00708	Acylphosphatase
SHALO_RS07075	PF01300	Telomere recombination
SHALO_RS07075	PF07503	HypF finger
SHALO_RS07080	PF01402	Ribbon-helix-helix protein, copG family
SHALO_RS07080	PF08753	NikR C terminal nickel binding domain
SHALO_RS07085	PF00593	TonB dependent receptor
SHALO_RS07085	PF07715	TonB-dependent Receptor Plug Domain
SHALO_RS07090	PF13520	Amino acid permease
SHALO_RS07100	PF02492	CobW/HypB/UreG, nucleotide-binding domain
SHALO_RS07105	PF01455	HupF/HypC family
SHALO_RS07110	PF01924	Hydrogenase formation hypA family
SHALO_RS07115	PF00586	AIR synthase related protein, N-terminal domain
SHALO_RS07115	PF02769	AIR synthase related protein, C-terminal domain
SHALO_RS07120	PF01155	Hydrogenase expression/synthesis hypA family
SHALO_RS07125	PF13420	Acetyltransferase (GNAT) domain
SHALO_RS07130	PF13419	Haloacid dehalogenase-like hydrolase
SHALO_RS07135	PF13109	SHALO_RS07135
SHALO_RS07135	PF13116	SHALO_RS07135
SHALO_RS07140	PF02618	YceG-like family
SHALO_RS07145	PF03971	Monomeric isocitrate dehydrogenase
SHALO_RS07150	PF00056	lactate/malate dehydrogenase, NAD binding domain
SHALO_RS07150	PF02866	lactate/malate dehydrogenase, alpha/beta C-terminal domain
SHALO_RS07155	PF00549	CoA-ligase
SHALO_RS07155	PF08442	ATP-grasp domain
SHALO_RS07160	PF00549	CoA-ligase
SHALO_RS07160	PF02629	CoA binding domain
SHALO_RS07165	PF12838	4Fe-4S dicluster domain
SHALO_RS07170	PF01855	Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg
SHALO_RS07170	PF17147	SHALO_RS07170
SHALO_RS07175	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
SHALO_RS07180	PF01558	Pyruvate ferredoxin/flavodoxin oxidoreductase
SHALO_RS07200	PF00206	Lyase
SHALO_RS07200	PF10415	Fumarase C C-terminus
SHALO_RS07210	PF00023	Ankyrin repeat
SHALO_RS07210	PF12796	Ankyrin repeats (3 copies)
SHALO_RS07215	PF01914	SHALO_RS07215
SHALO_RS07225	PF08901	SHALO_RS07225
SHALO_RS07230	PF01168	Alanine racemase, N-terminal domain
SHALO_RS07235	PF00595	PDZ domain (Also known as DHR or GLGF)
SHALO_RS07235	PF02163	Peptidase family M50
SHALO_RS07240	PF01066	CDP-alcohol phosphatidyltransferase
SHALO_RS07245	PF13561	Enoyl-(Acyl carrier protein) reductase
SHALO_RS07250	PF00701	Dihydrodipicolinate synthetase family
SHALO_RS07255	PF00675	Insulinase (Peptidase family M16)
SHALO_RS07255	PF05193	Peptidase M16 inactive domain
SHALO_RS07260	PF01180	Dihydroorotate dehydrogenase
SHALO_RS07265	PF00005	ABC transporter
SHALO_RS07265	PF00664	ABC transporter transmembrane region
SHALO_RS07270	PF01406	tRNA synthetases class I (C) catalytic domain
SHALO_RS07275	PF03023	SHALO_RS07275
SHALO_RS07280	PF03961	SHALO_RS07280
SHALO_RS07285	PF01330	RuvA N terminal domain
SHALO_RS07285	PF07499	RuvA, C-terminal domain
SHALO_RS07285	PF14520	Helix-hairpin-helix domain
SHALO_RS07290	PF01820	D-ala D-ala ligase N-terminus
SHALO_RS07290	PF07478	D-ala D-ala ligase C-terminus
SHALO_RS07295	PF02604	Antitoxin Phd_YefM, type II toxin-antitoxin system
SHALO_RS07300	PF12697	Alpha/beta hydrolase family
SHALO_RS07305	PF00708	Acylphosphatase
SHALO_RS07310	PF08245	Mur ligase middle domain
SHALO_RS07315	PF01515	Phosphate acetyl/butaryl transferase
SHALO_RS07315	PF07085	DRTGG domain
SHALO_RS07315	PF13500	AAA domain
SHALO_RS07320	PF00871	Acetokinase family
SHALO_RS07325	PF09424	Yqey-like protein
SHALO_RS07330	PF02107	SHALO_RS07330
SHALO_RS07340	PF00482	Type II secretion system (T2SS), protein F
SHALO_RS07345	PF00437	Type II/IV secretion system protein
SHALO_RS07345	PF05157	Type II secretion system (T2SS), protein E, N-terminal domain
SHALO_RS07350	PF12895	Anaphase-promoting complex, cyclosome, subunit 3
SHALO_RS07355	PF13401	AAA domain
SHALO_RS07360	PF00263	SHALO_RS07360
SHALO_RS07380	PF01926	50S ribosome-binding GTPase
SHALO_RS07380	PF07650	KH domain
SHALO_RS07385	PF07724	AAA domain (Cdc48 subfamily)
SHALO_RS07385	PF10431	C-terminal, D2-small domain, of ClpB protein
SHALO_RS07390	PF00227	Proteasome subunit
SHALO_RS07395	PF01281	Ribosomal protein L9, N-terminal domain
SHALO_RS07395	PF03948	Ribosomal protein L9, C-terminal domain
SHALO_RS07400	PF00581	Rhodanese-like domain
SHALO_RS07405	PF00764	Arginosuccinate synthase
SHALO_RS07410	PF01479	S4 domain
SHALO_RS07415	PF00591	Glycosyl transferase family, a/b domain
SHALO_RS07415	PF02885	Glycosyl transferase family, helical bundle domain
SHALO_RS07420	PF02367	Uncharacterised P-loop hydrolase UPF0079
SHALO_RS07425	PF00005	ABC transporter
SHALO_RS07430	PF00309	SHALO_RS07430
SHALO_RS07430	PF04552	Sigma-54, DNA binding domain
SHALO_RS07430	PF04963	Sigma-54 factor, core binding domain
SHALO_RS07435	PF00226	DnaJ domain
SHALO_RS07440	PF04376	SHALO_RS07440
SHALO_RS07440	PF04377	SHALO_RS07440
SHALO_RS07450	PF03573	outer membrane porin, OprD family
SHALO_RS07455	PF00672	HAMP domain
SHALO_RS07455	PF02743	Cache domain
SHALO_RS07460	PF13359	SHALO_RS07460
SHALO_RS07465	PF13613	SHALO_RS07465
SHALO_RS07470	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
SHALO_RS07475	PF13487	HD domain
SHALO_RS07485	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SHALO_RS07485	PF02743	Cache domain
SHALO_RS07490	PF00072	Response regulator receiver domain
SHALO_RS07490	PF00486	Transcriptional regulatory protein, C terminal
SHALO_RS07495	PF14537	Cytochrome c3
SHALO_RS07500	PF03264	NapC/NirT cytochrome c family, N-terminal region
SHALO_RS07505	PF00890	FAD binding domain
SHALO_RS07510	PF00925	GTP cyclohydrolase II
SHALO_RS07515	PF00925	GTP cyclohydrolase II
SHALO_RS07515	PF00926	3,4-dihydroxy-2-butanone 4-phosphate synthase
SHALO_RS07520	PF00885	6,7-dimethyl-8-ribityllumazine synthase
SHALO_RS07525	PF02627	Carboxymuconolactone decarboxylase family
SHALO_RS07530	PF13484	SHALO_RS07530
SHALO_RS07530	PF13486	SHALO_RS07530
SHALO_RS07540	PF01592	NifU-like N terminal domain
SHALO_RS07545	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SHALO_RS07545	PF07695	SHALO_RS07545
SHALO_RS07550	PF00072	Response regulator receiver domain
SHALO_RS07550	PF00486	Transcriptional regulatory protein, C terminal
SHALO_RS07555	PF13484	SHALO_RS07555
SHALO_RS07555	PF13486	SHALO_RS07555
SHALO_RS07565	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SHALO_RS07565	PF07695	SHALO_RS07565
SHALO_RS07570	PF00072	Response regulator receiver domain
SHALO_RS07570	PF00486	Transcriptional regulatory protein, C terminal
SHALO_RS07575	PF14358	SHALO_RS07575
SHALO_RS07580	PF00037	4Fe-4S binding domain
SHALO_RS07580	PF12800	4Fe-4S binding domain
SHALO_RS07580	PF12838	4Fe-4S dicluster domain
SHALO_RS07585	PF00037	4Fe-4S binding domain
SHALO_RS07585	PF12801	SHALO_RS07585
SHALO_RS07590	PF03186	SHALO_RS07590
SHALO_RS07595	PF00155	Aminotransferase class I and II
SHALO_RS07600	PF02283	Cobinamide kinase / cobinamide phosphate guanyltransferase
SHALO_RS07605	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
SHALO_RS07605	PF07685	CobB/CobQ-like glutamine amidotransferase domain
SHALO_RS07610	PF02277	Phosphoribosyltransferase
SHALO_RS07615	PF04071	SHALO_RS07615
SHALO_RS07620	PF02654	SHALO_RS07620
SHALO_RS07625	PF00300	Histidine phosphatase superfamily (branch 1)
SHALO_RS07630	PF06180	Cobalt chelatase (CbiK)
SHALO_RS07635	PF01032	FecCD transport family
SHALO_RS07640	PF00005	ABC transporter
SHALO_RS07645	PF01497	Periplasmic binding protein
SHALO_RS07650	PF02570	Precorrin-8X methylmutase
SHALO_RS07655	PF01888	CbiD
SHALO_RS07660	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
SHALO_RS07665	PF13847	Methyltransferase domain
SHALO_RS07670	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
SHALO_RS07675	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
SHALO_RS07680	PF01890	Cobalamin synthesis G C-terminus
SHALO_RS07680	PF11760	Cobalamin synthesis G N-terminal
SHALO_RS07680	PF11761	SHALO_RS07680
SHALO_RS07685	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
SHALO_RS07690	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
SHALO_RS07690	PF02602	Uroporphyrinogen-III synthase HemD
SHALO_RS07695	PF02571	SHALO_RS07695
SHALO_RS07700	PF00005	ABC transporter
SHALO_RS07700	PF00664	ABC transporter transmembrane region
SHALO_RS07705	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
SHALO_RS07705	PF07685	CobB/CobQ-like glutamine amidotransferase domain
SHALO_RS07710	PF14375	SHALO_RS07710
SHALO_RS07715	PF13241	Putative NAD(P)-binding
SHALO_RS07720	PF00440	Bacterial regulatory proteins, tetR family
SHALO_RS07725	PF03358	NADPH-dependent FMN reductase
SHALO_RS07730	PF00355	Rieske [2Fe-2S] domain
SHALO_RS07735	PF01243	Pyridoxamine 5'-phosphate oxidase
SHALO_RS07790	PF01863	Protein of unknown function DUF45
SHALO_RS07825	PF00589	Phage integrase family
SHALO_RS07825	PF13356	Domain of unknown function (DUF4102)
SHALO_RS07835	PF00216	Bacterial DNA-binding protein
SHALO_RS07840	PF00669	Bacterial flagellin N-terminal helical region
SHALO_RS07840	PF00700	Bacterial flagellin C-terminal helical region
SHALO_RS07845	PF01580	FtsK/SpoIIIE family
SHALO_RS07845	PF09397	Ftsk gamma domain
SHALO_RS07845	PF13491	SHALO_RS07845
SHALO_RS07850	PF00330	Aconitase family (aconitate hydratase)
SHALO_RS07850	PF06434	Aconitate hydratase 2 N-terminus
SHALO_RS07850	PF11791	Aconitate B N-terminal domain
SHALO_RS07860	PF00391	PEP-utilising enzyme, mobile domain
SHALO_RS07860	PF01326	Pyruvate phosphate dikinase, PEP/pyruvate binding domain
SHALO_RS07860	PF02896	PEP-utilising enzyme, TIM barrel domain
SHALO_RS07865	PF07690	Major Facilitator Superfamily
SHALO_RS07875	PF02310	B12 binding domain
SHALO_RS07875	PF04055	Radical SAM superfamily
SHALO_RS07875	PF13311	SHALO_RS07875
SHALO_RS07885	PF05958	tRNA (Uracil-5-)-methyltransferase
SHALO_RS07890	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
SHALO_RS07890	PF00672	HAMP domain
SHALO_RS07895	PF13380	CoA binding domain
SHALO_RS07900	PF00291	Pyridoxal-phosphate dependent enzyme
SHALO_RS07910	PF00005	ABC transporter
SHALO_RS07915	PF00528	Binding-protein-dependent transport system inner membrane component
SHALO_RS07920	PF00528	Binding-protein-dependent transport system inner membrane component
SHALO_RS07925	PF00497	Bacterial extracellular solute-binding proteins, family 3
SHALO_RS07930	PF01474	Class-II DAHP synthetase family
SHALO_RS07935	PF00226	DnaJ domain
SHALO_RS07940	PF09335	SHALO_RS07940
SHALO_RS07945	PF01880	Desulfoferrodoxin
SHALO_RS07950	PF00005	ABC transporter
SHALO_RS07955	PF00171	Aldehyde dehydrogenase family
SHALO_RS07960	PF13738	Pyridine nucleotide-disulphide oxidoreductase
SHALO_RS07970	PF05175	Methyltransferase small domain
SHALO_RS07975	PF03692	SHALO_RS07975
SHALO_RS07985	PF00218	Indole-3-glycerol phosphate synthase
SHALO_RS07990	PF01230	HIT domain
SHALO_RS07995	PF00581	Rhodanese-like domain
SHALO_RS08000	PF10670	SHALO_RS08000
SHALO_RS08005	PF01891	Cobalt uptake substrate-specific transmembrane region
SHALO_RS08015	PF02361	Cobalt transport protein
SHALO_RS08020	PF00005	ABC transporter
SHALO_RS08025	PF04166	Pyridoxal phosphate biosynthetic protein PdxA
SHALO_RS08030	PF03740	Pyridoxal phosphate biosynthesis protein PdxJ
SHALO_RS08035	PF01292	Prokaryotic cytochrome b561
SHALO_RS08035	PF09626	Dihaem cytochrome c
SHALO_RS08040	PF00034	Cytochrome c
SHALO_RS08045	PF07992	Pyridine nucleotide-disulphide oxidoreductase
SHALO_RS08055	PF02541	Ppx/GppA phosphatase family
SHALO_RS08060	PF00205	Thiamine pyrophosphate enzyme, central domain
SHALO_RS08060	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
SHALO_RS08060	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
SHALO_RS08065	PF01842	ACT domain
SHALO_RS08065	PF10369	Small subunit of acetolactate synthase
SHALO_RS08070	PF00132	Bacterial transferase hexapeptide (six repeats)
SHALO_RS08070	PF04613	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD
SHALO_RS08080	PF07992	Pyridine nucleotide-disulphide oxidoreductase
SHALO_RS08080	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
SHALO_RS08085	PF00155	Aminotransferase class I and II
SHALO_RS08090	PF00148	Nitrogenase component 1 type Oxidoreductase
SHALO_RS08095	PF00158	Sigma-54 interaction domain
SHALO_RS08095	PF02954	Bacterial regulatory protein, Fis family
SHALO_RS08095	PF13185	GAF domain
SHALO_RS08105	PF00148	Nitrogenase component 1 type Oxidoreductase
SHALO_RS08110	PF03139	SHALO_RS08110
SHALO_RS08115	PF00148	Nitrogenase component 1 type Oxidoreductase
SHALO_RS08120	PF00132	Bacterial transferase hexapeptide (six repeats)
SHALO_RS08125	PF00278	Pyridoxal-dependent decarboxylase, C-terminal sheet domain
SHALO_RS08125	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
SHALO_RS08130	PF03129	Anticodon binding domain
SHALO_RS08130	PF13393	Histidyl-tRNA synthetase
SHALO_RS08135	PF02223	Thymidylate kinase
SHALO_RS08140	PF01467	Cytidylyltransferase
SHALO_RS08145	PF02441	Flavoprotein
SHALO_RS08150	PF13144	SAF-like
SHALO_RS08160	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
SHALO_RS08160	PF00672	HAMP domain
SHALO_RS08165	PF00994	Probable molybdopterin binding domain
SHALO_RS08165	PF03453	MoeA N-terminal region (domain I and II)
SHALO_RS08170	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
SHALO_RS08180	PF11381	SHALO_RS08180
SHALO_RS08190	PF00939	Sodium:sulfate symporter transmembrane region
SHALO_RS08200	PF00731	AIR carboxylase
SHALO_RS08210	PF01969	Protein of unknown function DUF111
SHALO_RS08215	PF09861	Domain of unknown function (DUF2088)
SHALO_RS08220	PF05683	Fumarase C-terminus
SHALO_RS08225	PF05681	SHALO_RS08225
SHALO_RS08230	PF03605	SHALO_RS08230
SHALO_RS08235	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SHALO_RS08235	PF04392	ABC transporter substrate binding protein
SHALO_RS08235	PF13426	PAS domain
SHALO_RS08240	PF00072	Response regulator receiver domain
SHALO_RS08240	PF00486	Transcriptional regulatory protein, C terminal
SHALO_RS08245	PF07690	Major Facilitator Superfamily
SHALO_RS08255	PF00300	Histidine phosphatase superfamily (branch 1)
SHALO_RS08260	PF01544	CorA-like Mg2+ transporter protein
SHALO_RS08265	PF00589	Phage integrase family
SHALO_RS08270	PF01702	Queuine tRNA-ribosyltransferase
SHALO_RS08275	PF02080	TrkA-C domain
SHALO_RS08280	PF01761	3-dehydroquinate synthase
SHALO_RS08285	PF00924	Mechanosensitive ion channel
SHALO_RS08290	PF00919	Uncharacterized protein family UPF0004
SHALO_RS08290	PF04055	Radical SAM superfamily
SHALO_RS08295	PF00004	ATPase family associated with various cellular activities (AAA)
SHALO_RS08295	PF01434	Peptidase family M41
SHALO_RS08305	PF00085	Thioredoxin
SHALO_RS08315	PF00296	Luciferase-like monooxygenase
SHALO_RS08320	PF04471	Restriction endonuclease
SHALO_RS08320	PF06114	Domain of unknown function (DUF955)
SHALO_RS08325	PF13561	Enoyl-(Acyl carrier protein) reductase
SHALO_RS08335	PF08279	HTH domain
SHALO_RS08335	PF13280	SHALO_RS08335
SHALO_RS08340	PF00849	RNA pseudouridylate synthase
SHALO_RS08350	PF00205	Thiamine pyrophosphate enzyme, central domain
SHALO_RS08350	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
SHALO_RS08350	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
SHALO_RS08355	PF01323	DSBA-like thioredoxin domain
SHALO_RS08365	PF04960	Glutaminase
SHALO_RS08370	PF00563	EAL domain
SHALO_RS08370	PF00990	GGDEF domain
SHALO_RS08370	PF02743	Cache domain
SHALO_RS08375	PF12625	SHALO_RS08375
SHALO_RS08375	PF12833	Helix-turn-helix domain
SHALO_RS08380	PF03653	SHALO_RS08380
SHALO_RS08385	PF00440	Bacterial regulatory proteins, tetR family
SHALO_RS08390	PF02321	Outer membrane efflux protein
SHALO_RS08395	PF16576	SHALO_RS08395
SHALO_RS08400	PF00873	AcrB/AcrD/AcrF family
SHALO_RS08410	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
SHALO_RS08410	PF08495	SHALO_RS08410
SHALO_RS08410	PF10442	SHALO_RS08410
SHALO_RS08415	PF02915	Rubrerythrin
SHALO_RS08415	PF06397	Desulfoferrodoxin, N-terminal domain
SHALO_RS08425	PF01977	3-octaprenyl-4-hydroxybenzoate carboxy-lyase
SHALO_RS08430	PF01379	Porphobilinogen deaminase, dipyromethane cofactor binding domain
SHALO_RS08430	PF03900	Porphobilinogen deaminase, C-terminal domain
SHALO_RS08435	PF13462	Thioredoxin
SHALO_RS08440	PF04186	SHALO_RS08440
SHALO_RS08445	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
SHALO_RS08445	PF03129	Anticodon binding domain
SHALO_RS08445	PF04073	Aminoacyl-tRNA editing domain
SHALO_RS08450	PF00745	Glutamyl-tRNAGlu reductase, dimerisation domain
SHALO_RS08450	PF01488	Shikimate / quinate 5-dehydrogenase
SHALO_RS08450	PF05201	Glutamyl-tRNAGlu reductase, N-terminal domain
SHALO_RS08455	PF00348	Polyprenyl synthetase
SHALO_RS08465	PF09442	Domain of unknown function (DUF2018)
SHALO_RS08470	PF01053	Cys/Met metabolism PLP-dependent enzyme
SHALO_RS08475	PF02082	Transcriptional regulator
SHALO_RS08480	PF00291	Pyridoxal-phosphate dependent enzyme
SHALO_RS08485	PF00990	GGDEF domain
SHALO_RS08490	PF00133	tRNA synthetases class I (I, L, M and V)
SHALO_RS08490	PF08264	Anticodon-binding domain of tRNA
SHALO_RS08490	PF10458	Valyl tRNA synthetase tRNA binding arm
SHALO_RS08495	PF03480	Bacterial extracellular solute-binding protein, family 7
SHALO_RS08500	PF00994	Probable molybdopterin binding domain
SHALO_RS08505	PF02558	Ketopantoate reductase PanE/ApbA
SHALO_RS08505	PF08546	Ketopantoate reductase PanE/ApbA C terminal
SHALO_RS08510	PF00815	Histidinol dehydrogenase
SHALO_RS08520	PF01116	Fructose-bisphosphate aldolase class-II
SHALO_RS08525	PF13616	PPIC-type PPIASE domain
SHALO_RS08530	PF00730	HhH-GPD superfamily base excision DNA repair protein
SHALO_RS08535	PF00578	AhpC/TSA family
SHALO_RS08540	PF01546	Peptidase family M20/M25/M40
SHALO_RS08550	PF08003	Protein of unknown function (DUF1698)
SHALO_RS08560	PF00753	Metallo-beta-lactamase superfamily
SHALO_RS08565	PF02540	NAD synthase
SHALO_RS08570	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
SHALO_RS08575	PF02606	Tetraacyldisaccharide-1-P 4'-kinase
SHALO_RS08580	PF00696	Amino acid kinase family
SHALO_RS08585	PF00291	Pyridoxal-phosphate dependent enzyme
SHALO_RS08585	PF14821	Threonine synthase N terminus
SHALO_RS08590	PF02348	Cytidylyltransferase
SHALO_RS08605	PF02683	SHALO_RS08605
SHALO_RS08605	PF11412	Disulphide bond corrector protein DsbC
SHALO_RS08605	PF13899	Thioredoxin-like
SHALO_RS08610	PF03976	Polyphosphate kinase 2 (PPK2)
SHALO_RS08615	PF00012	Hsp70 protein
SHALO_RS08620	PF01025	GrpE
SHALO_RS08635	PF00312	Ribosomal protein S15
SHALO_RS08640	PF02082	Transcriptional regulator
SHALO_RS08645	PF00771	FHIPEP family
SHALO_RS08660	PF13649	Methyltransferase domain
SHALO_RS08665	PF00990	GGDEF domain
SHALO_RS08670	PF01687	Riboflavin kinase
SHALO_RS08670	PF06574	FAD synthetase
SHALO_RS08675	PF01479	S4 domain
SHALO_RS08675	PF01728	FtsJ-like methyltransferase
SHALO_RS08680	PF00533	BRCA1 C Terminus (BRCT) domain
SHALO_RS08680	PF01653	NAD-dependent DNA ligase adenylation domain
SHALO_RS08680	PF03119	NAD-dependent DNA ligase C4 zinc finger domain
SHALO_RS08680	PF03120	NAD-dependent DNA ligase OB-fold domain
SHALO_RS08680	PF12826	Helix-hairpin-helix motif
SHALO_RS08680	PF14520	Helix-hairpin-helix domain
SHALO_RS08685	PF01925	SHALO_RS08685
SHALO_RS08695	PF00809	Pterin binding enzyme
SHALO_RS08700	PF13177	DNA polymerase III, delta subunit
SHALO_RS08705	PF12163	DNA replication regulator
SHALO_RS08710	PF00696	Amino acid kinase family
SHALO_RS08710	PF01842	ACT domain
SHALO_RS08710	PF13840	ACT domain
SHALO_RS08715	PF00293	NUDIX domain
SHALO_RS08720	PF04055	Radical SAM superfamily
SHALO_RS08725	PF00999	Sodium/hydrogen exchanger family
SHALO_RS08725	PF02254	TrkA-N domain
SHALO_RS08730	PF13411	MerR HTH family regulatory protein
SHALO_RS08735	PF00226	DnaJ domain
SHALO_RS08735	PF01556	DnaJ C terminal domain
SHALO_RS08740	PF13180	PDZ domain
SHALO_RS08740	PF13365	Trypsin-like peptidase domain
SHALO_RS08745	PF00072	Response regulator receiver domain
SHALO_RS08745	PF00486	Transcriptional regulatory protein, C terminal
SHALO_RS08750	PF00672	HAMP domain
SHALO_RS08750	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SHALO_RS08760	PF02687	SHALO_RS08760
SHALO_RS08765	PF01043	SecA preprotein cross-linking domain
SHALO_RS08765	PF02810	SEC-C motif
SHALO_RS08765	PF07516	SecA Wing and Scaffold domain
SHALO_RS08765	PF07517	SecA DEAD-like domain
SHALO_RS08770	PF03548	Outer membrane lipoprotein carrier protein LolA
SHALO_RS08775	PF00563	EAL domain
SHALO_RS08775	PF00990	GGDEF domain
SHALO_RS08775	PF11845	SHALO_RS08775
SHALO_RS08780	PF06965	Na+/H+ antiporter 1
SHALO_RS08785	PF01926	50S ribosome-binding GTPase
SHALO_RS08785	PF10396	GTP-binding protein TrmE N-terminus
SHALO_RS08785	PF12631	Catalytic cysteine-containing C-terminus of GTPase, MnmE
SHALO_RS08790	PF14804	Jag N-terminus
SHALO_RS08795	PF02096	60Kd inner membrane protein
SHALO_RS08795	PF14849	YidC periplasmic domain
SHALO_RS08800	PF01809	SHALO_RS08800
SHALO_RS08805	PF00468	Ribosomal protein L34
SHALO_RS08810	PF00501	AMP-binding enzyme
SHALO_RS08815	PF13941	SHALO_RS08815
SHALO_RS08820	PF06368	Methylaspartate mutase E chain (MutE)
SHALO_RS08825	PF02310	B12 binding domain
SHALO_RS08835	PF03737	Demethylmenaquinone methyltransferase
SHALO_RS08850	PF00004	ATPase family associated with various cellular activities (AAA)
SHALO_RS08850	PF02861	Clp amino terminal domain
SHALO_RS08850	PF07724	AAA domain (Cdc48 subfamily)
SHALO_RS08850	PF10431	C-terminal, D2-small domain, of ClpB protein
SHALO_RS08855	PF03572	Peptidase family S41
SHALO_RS08855	PF13180	PDZ domain
SHALO_RS08860	PF01259	SAICAR synthetase
SHALO_RS08865	PF02700	Phosphoribosylformylglycinamidine (FGAM) synthase
SHALO_RS08870	PF13507	CobB/CobQ-like glutamine amidotransferase domain
SHALO_RS08880	PF01553	Acyltransferase
SHALO_RS08885	PF00183	Hsp90 protein
SHALO_RS08885	PF13589	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SHALO_RS08895	PF03190	Protein of unknown function, DUF255
SHALO_RS08900	PF00581	Rhodanese-like domain
SHALO_RS08905	PF00580	UvrD/REP helicase N-terminal domain
SHALO_RS08905	PF13361	UvrD-like helicase C-terminal domain
SHALO_RS08915	PF12895	Anaphase-promoting complex, cyclosome, subunit 3
SHALO_RS08920	PF13401	AAA domain
SHALO_RS08925	PF02579	Dinitrogenase iron-molybdenum cofactor
SHALO_RS08940	PF02689	SHALO_RS08940
SHALO_RS08940	PF05970	SHALO_RS08940
SHALO_RS08945	PF00877	NlpC/P60 family
SHALO_RS08945	PF12912	NLPC_P60 stabilising domain, N term
SHALO_RS08945	PF12913	SH3 domain of the SH3b1 type
SHALO_RS08945	PF12914	SH3 domain of SH3b2 type
SHALO_RS08945	PF13539	D-alanyl-D-alanine carboxypeptidase
SHALO_RS08950	PF00857	Isochorismatase family
SHALO_RS08955	PF08410	SHALO_RS08955
SHALO_RS08960	PF08534	Redoxin
SHALO_RS08965	PF05940	SHALO_RS08965
SHALO_RS08970	PF00403	Heavy-metal-associated domain
SHALO_RS08975	PF00122	E1-E2 ATPase
SHALO_RS08975	PF00403	Heavy-metal-associated domain
SHALO_RS08975	PF00702	haloacid dehalogenase-like hydrolase
SHALO_RS08980	PF01966	HD domain
SHALO_RS08980	PF02743	Cache domain
SHALO_RS08980	PF13487	HD domain
SHALO_RS08985	PF02646	SHALO_RS08985
SHALO_RS08995	PF01795	MraW methylase family
SHALO_RS09000	PF00202	Aminotransferase class-III
SHALO_RS09005	PF13145	PPIC-type PPIASE domain
SHALO_RS09005	PF13624	SurA N-terminal domain
SHALO_RS09010	PF02491	SHS2 domain inserted in FTSA
SHALO_RS09010	PF14450	Cell division protein FtsA
SHALO_RS09015	PF00091	Tubulin/FtsZ family, GTPase domain
SHALO_RS09015	PF12327	FtsZ family, C-terminal domain
SHALO_RS09020	PF13664	SHALO_RS09020
SHALO_RS09025	PF05175	Methyltransferase small domain
SHALO_RS09030	PF01435	Peptidase family M48
SHALO_RS09030	PF16491	SHALO_RS09030
SHALO_RS09035	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
SHALO_RS09035	PF12729	SHALO_RS09035
SHALO_RS09040	PF00005	ABC transporter
SHALO_RS09040	PF12848	ABC transporter
SHALO_RS09040	PF16326	SHALO_RS09040
SHALO_RS09045	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
SHALO_RS09045	PF00672	HAMP domain
SHALO_RS09055	PF01883	Domain of unknown function DUF59
SHALO_RS09070	PF02705	SHALO_RS09070
SHALO_RS09075	PF01808	AICARFT/IMPCHase bienzyme
SHALO_RS09075	PF02142	MGS-like domain
SHALO_RS09080	PF02600	Disulfide bond formation protein DsbB
SHALO_RS09085	PF13462	Thioredoxin
SHALO_RS09090	PF03061	Thioesterase superfamily
SHALO_RS09095	PF00226	DnaJ domain
SHALO_RS09095	PF05099	Tellurite resistance protein TerB
SHALO_RS09100	PF00155	Aminotransferase class I and II
SHALO_RS09105	PF00149	Calcineurin-like phosphoesterase
SHALO_RS09110	PF00877	NlpC/P60 family
SHALO_RS09120	PF09997	SHALO_RS09120
SHALO_RS09125	PF00586	AIR synthase related protein, N-terminal domain
SHALO_RS09125	PF02769	AIR synthase related protein, C-terminal domain
SHALO_RS09130	PF00563	EAL domain
SHALO_RS09130	PF00990	GGDEF domain
SHALO_RS09130	PF08447	PAS fold
SHALO_RS09135	PF02416	mttA/Hcf106 family
SHALO_RS09140	PF00902	Sec-independent protein translocase protein (TatC)
SHALO_RS09145	PF02547	Queuosine biosynthesis protein
SHALO_RS09150	PF03865	Haemolysin secretion/activation protein ShlB/FhaC/HecB
SHALO_RS09150	PF08479	POTRA domain, ShlB-type
SHALO_RS09155	PF05860	haemagglutination activity domain
SHALO_RS09155	PF13332	SHALO_RS09155
SHALO_RS09190	PF05656	SHALO_RS09190
SHALO_RS09210	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
SHALO_RS09215	PF00497	Bacterial extracellular solute-binding proteins, family 3
SHALO_RS09220	PF00072	Response regulator receiver domain
SHALO_RS09220	PF01966	HD domain
SHALO_RS09225	PF00072	Response regulator receiver domain
SHALO_RS09225	PF00512	His Kinase A (phospho-acceptor) domain
SHALO_RS09225	PF00672	HAMP domain
SHALO_RS09225	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SHALO_RS09230	PF07521	RNA-metabolising metallo-beta-lactamase
SHALO_RS09230	PF10996	Beta-Casp domain
SHALO_RS09230	PF16661	SHALO_RS09230
SHALO_RS09235	PF00501	AMP-binding enzyme
SHALO_RS09245	PF07715	TonB-dependent Receptor Plug Domain
SHALO_RS09250	PF00512	His Kinase A (phospho-acceptor) domain
SHALO_RS09250	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SHALO_RS09250	PF13493	Domain of unknown function (DUF4118)
SHALO_RS09255	PF00072	Response regulator receiver domain
SHALO_RS09255	PF00486	Transcriptional regulatory protein, C terminal
SHALO_RS09260	PF02386	Cation transport protein
SHALO_RS09265	PF02254	TrkA-N domain
SHALO_RS09270	PF01641	SelR domain
SHALO_RS09275	PF00571	CBS domain
SHALO_RS09275	PF01595	SHALO_RS09275
SHALO_RS09280	PF00300	Histidine phosphatase superfamily (branch 1)
SHALO_RS09285	PF12804	MobA-like NTP transferase domain
SHALO_RS09290	PF02625	XdhC and CoxI family
SHALO_RS09290	PF13478	XdhC Rossmann domain
SHALO_RS09295	PF00501	AMP-binding enzyme
SHALO_RS09300	PF04055	Radical SAM superfamily
SHALO_RS09300	PF13353	4Fe-4S single cluster domain
SHALO_RS09305	PF09719	Putative redox-active protein (C_GCAxxG_C_C)
SHALO_RS09310	PF08241	Methyltransferase domain
SHALO_RS09320	PF02754	SHALO_RS09320
SHALO_RS09320	PF13450	NAD(P)-binding Rossmann-like domain
SHALO_RS09320	PF13534	4Fe-4S dicluster domain
SHALO_RS09320	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
SHALO_RS09325	PF00111	2Fe-2S iron-sulfur cluster binding domain
SHALO_RS09325	PF01315	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
SHALO_RS09325	PF01799	[2Fe-2S] binding domain
SHALO_RS09325	PF02738	Molybdopterin-binding domain of aldehyde dehydrogenase
SHALO_RS09330	PF00512	His Kinase A (phospho-acceptor) domain
SHALO_RS09330	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SHALO_RS09330	PF08495	SHALO_RS09330
SHALO_RS09330	PF10442	SHALO_RS09330
SHALO_RS09335	PF00072	Response regulator receiver domain
SHALO_RS09335	PF00486	Transcriptional regulatory protein, C terminal
SHALO_RS09345	PF01292	Prokaryotic cytochrome b561
SHALO_RS09355	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SHALO_RS09360	PF00072	Response regulator receiver domain
SHALO_RS09360	PF00486	Transcriptional regulatory protein, C terminal
SHALO_RS09365	PF02583	Metal-sensitive transcriptional repressor
SHALO_RS09370	PF01545	Cation efflux family
SHALO_RS09380	PF03929	SHALO_RS09380
SHALO_RS09390	PF00593	TonB dependent receptor
SHALO_RS09390	PF07715	TonB-dependent Receptor Plug Domain
SHALO_RS09395	PF12833	Helix-turn-helix domain
SHALO_RS09400	PF00924	Mechanosensitive ion channel
SHALO_RS09405	PF00982	Glycosyltransferase family 20
SHALO_RS09405	PF05116	Sucrose-6F-phosphate phosphohydrolase
SHALO_RS09410	PF01909	Nucleotidyltransferase domain
SHALO_RS09420	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
SHALO_RS09435	PF02146	Sir2 family
SHALO_RS09440	PF00561	alpha/beta hydrolase fold
SHALO_RS09445	PF00809	Pterin binding enzyme
SHALO_RS09445	PF02310	B12 binding domain
SHALO_RS09445	PF02574	Homocysteine S-methyltransferase
SHALO_RS09445	PF02607	B12 binding domain
SHALO_RS09445	PF02965	Vitamin B12 dependent methionine synthase, activation domain
SHALO_RS09450	PF13458	Periplasmic binding protein
SHALO_RS09455	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
SHALO_RS09460	PF01810	SHALO_RS09460
SHALO_RS09465	PF00892	EamA-like transporter family
SHALO_RS09470	PF00884	Sulfatase
SHALO_RS09475	PF00909	Ammonium Transporter Family
SHALO_RS09480	PF00543	Nitrogen regulatory protein P-II
SHALO_RS09490	PF00384	Molybdopterin oxidoreductase
SHALO_RS09495	PF00990	GGDEF domain
SHALO_RS09495	PF01966	HD domain
SHALO_RS09495	PF11845	SHALO_RS09495
SHALO_RS09500	PF02092	SHALO_RS09500
SHALO_RS09510	PF03372	Endonuclease/Exonuclease/phosphatase family
SHALO_RS09515	PF00484	Carbonic anhydrase
SHALO_RS09520	PF06865	Protein of unknown function (DUF1255)
SHALO_RS09525	PF00563	EAL domain
SHALO_RS09525	PF00990	GGDEF domain
SHALO_RS09525	PF03924	CHASE domain
SHALO_RS09525	PF08448	PAS fold
SHALO_RS09530	PF03486	HI0933-like protein
SHALO_RS09535	PF04402	Protein of unknown function (DUF541)
SHALO_RS09540	PF00588	SpoU rRNA Methylase family
SHALO_RS09545	PF00551	Formyl transferase
SHALO_RS09550	PF01743	Poly A polymerase head domain
SHALO_RS09565	PF00180	Isocitrate/isopropylmalate dehydrogenase
SHALO_RS09570	PF00694	Aconitase C-terminal domain
SHALO_RS09575	PF00005	ABC transporter
SHALO_RS09580	PF10543	SHALO_RS09580
SHALO_RS09585	PF00873	AcrB/AcrD/AcrF family
SHALO_RS09590	PF01810	SHALO_RS09590
SHALO_RS09595	PF01022	Bacterial regulatory protein, arsR family
SHALO_RS09600	PF03372	Endonuclease/Exonuclease/phosphatase family
SHALO_RS09605	PF08447	PAS fold
SHALO_RS09610	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
SHALO_RS09615	PF00293	NUDIX domain
SHALO_RS09620	PF00174	Oxidoreductase molybdopterin binding domain
SHALO_RS09625	PF01794	SHALO_RS09625
SHALO_RS09630	PF01810	SHALO_RS09630
SHALO_RS09635	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
SHALO_RS09635	PF12729	SHALO_RS09635
SHALO_RS09640	PF06719	SHALO_RS09640
SHALO_RS09640	PF12833	Helix-turn-helix domain
SHALO_RS09645	PF03358	NADPH-dependent FMN reductase
SHALO_RS09650	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
SHALO_RS09655	PF12974	ABC transporter, phosphonate, periplasmic substrate-binding protein
SHALO_RS09660	PF00990	GGDEF domain
SHALO_RS09660	PF14827	Sensory domain of two-component sensor kinase
SHALO_RS09665	PF12974	ABC transporter, phosphonate, periplasmic substrate-binding protein
SHALO_RS09670	PF09962	SHALO_RS09670
SHALO_RS09675	PF00270	DEAD/DEAH box helicase
SHALO_RS09675	PF00271	Helicase conserved C-terminal domain
SHALO_RS09675	PF00570	HRDC domain
SHALO_RS09675	PF09382	RQC domain
SHALO_RS09675	PF16124	SHALO_RS09675
SHALO_RS09680	PF03061	Thioesterase superfamily
SHALO_RS09690	PF00270	DEAD/DEAH box helicase
SHALO_RS09690	PF00271	Helicase conserved C-terminal domain
SHALO_RS09695	PF12974	ABC transporter, phosphonate, periplasmic substrate-binding protein
SHALO_RS09700	PF00990	GGDEF domain
SHALO_RS09700	PF13426	PAS domain
SHALO_RS09700	PF14827	Sensory domain of two-component sensor kinase
SHALO_RS09705	PF00512	His Kinase A (phospho-acceptor) domain
SHALO_RS09705	PF00672	HAMP domain
SHALO_RS09705	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SHALO_RS09710	PF00072	Response regulator receiver domain
SHALO_RS09710	PF00486	Transcriptional regulatory protein, C terminal
SHALO_RS09715	PF07813	LTXXQ motif family protein
SHALO_RS09720	PF01292	Prokaryotic cytochrome b561
SHALO_RS09720	PF09626	Dihaem cytochrome c
SHALO_RS09725	PF09626	Dihaem cytochrome c
SHALO_RS09730	PF09086	Domain of unknown function (DUF1924)
SHALO_RS09740	PF00501	AMP-binding enzyme
SHALO_RS09740	PF13193	AMP-binding enzyme C-terminal domain
SHALO_RS09740	PF16177	SHALO_RS09740
SHALO_RS09745	PF13714	Phosphoenolpyruvate phosphomutase
SHALO_RS09750	PF00285	Citrate synthase
SHALO_RS09755	PF03972	MmgE/PrpD family
SHALO_RS09765	PF03831	PhnA protein
SHALO_RS09765	PF08274	PhnA Zinc-Ribbon
SHALO_RS09770	PF05437	SHALO_RS09770
SHALO_RS09775	PF03591	SHALO_RS09775
SHALO_RS09780	PF00460	Flagella basal body rod protein
SHALO_RS09780	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
SHALO_RS09785	PF00460	Flagella basal body rod protein
SHALO_RS09785	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
SHALO_RS09790	PF00140	Sigma-70 factor, region 1
SHALO_RS09790	PF04539	Sigma-70 region 3
SHALO_RS09790	PF04542	Sigma-70 region 2
SHALO_RS09790	PF04545	Sigma-70, region 4
SHALO_RS09800	PF01638	HxlR-like helix-turn-helix
SHALO_RS09805	PF07978	NIPSNAP
SHALO_RS09810	PF03358	NADPH-dependent FMN reductase
SHALO_RS09815	PF07277	SHALO_RS09815
SHALO_RS09820	PF00501	AMP-binding enzyme
SHALO_RS09820	PF13193	AMP-binding enzyme C-terminal domain
SHALO_RS09820	PF16177	SHALO_RS09820
SHALO_RS09825	PF00474	Sodium:solute symporter family
SHALO_RS09830	PF04341	SHALO_RS09830
SHALO_RS09835	PF00072	Response regulator receiver domain
SHALO_RS09835	PF00486	Transcriptional regulatory protein, C terminal
SHALO_RS09845	PF04371	Porphyromonas-type peptidyl-arginine deiminase
SHALO_RS09850	PF01545	Cation efflux family
SHALO_RS09850	PF16916	SHALO_RS09850
SHALO_RS09855	PF02421	Ferrous iron transport protein B
SHALO_RS09855	PF07664	SHALO_RS09855
SHALO_RS09855	PF07670	Nucleoside recognition
SHALO_RS09860	PF04023	FeoA domain
SHALO_RS09865	PF00795	Carbon-nitrogen hydrolase
SHALO_RS09870	PF13304	AAA domain
SHALO_RS09885	PF03459	TOBE domain
SHALO_RS09895	PF01544	CorA-like Mg2+ transporter protein
SHALO_RS09900	PF01551	Peptidase family M23
SHALO_RS09905	PF15436	SHALO_RS09905
SHALO_RS09910	PF01565	FAD binding domain
SHALO_RS09910	PF02913	FAD linked oxidases, C-terminal domain
SHALO_RS09915	PF03631	SHALO_RS09915
SHALO_RS09920	PF03772	SHALO_RS09920
SHALO_RS09925	PF00772	DnaB-like helicase N terminal domain
SHALO_RS09925	PF03796	DnaB-like helicase C terminal domain
SHALO_RS09925	PF05203	Hom_end-associated Hint
SHALO_RS09925	PF05204	Homing endonuclease
SHALO_RS09930	PF04551	GcpE protein
SHALO_RS09935	PF00270	DEAD/DEAH box helicase
SHALO_RS09935	PF00271	Helicase conserved C-terminal domain
SHALO_RS09945	PF13633	Prokaryotic N-terminal methylation site
SHALO_RS09960	PF00271	Helicase conserved C-terminal domain
SHALO_RS09960	PF02151	UvrB/uvrC motif
SHALO_RS09960	PF04851	Type III restriction enzyme, res subunit
SHALO_RS09960	PF12344	Ultra-violet resistance protein B
SHALO_RS09965	PF02503	Polyphosphate kinase middle domain
SHALO_RS09965	PF13089	Polyphosphate kinase N-terminal domain
SHALO_RS09965	PF13090	Polyphosphate kinase C-terminal domain
SHALO_RS09970	PF00132	Bacterial transferase hexapeptide (six repeats)
SHALO_RS09975	PF00929	Exonuclease
SHALO_RS09980	PF00697	N-(5'phosphoribosyl)anthranilate (PRA) isomerase
SHALO_RS09985	PF00834	Ribulose-phosphate 3 epimerase family
SHALO_RS09990	PF00830	Ribosomal L28 family
SHALO_RS09995	PF01960	ArgJ family
SHALO_RS10000	PF04325	Protein of unknown function (DUF465)
SHALO_RS10005	PF00633	Helix-hairpin-helix motif
SHALO_RS10005	PF00730	HhH-GPD superfamily base excision DNA repair protein
SHALO_RS10010	PF13277	YmdB-like protein
SHALO_RS10015	PF00270	DEAD/DEAH box helicase
SHALO_RS10015	PF00271	Helicase conserved C-terminal domain
SHALO_RS10015	PF02559	CarD-like/TRCF domain
SHALO_RS10015	PF03461	TRCF domain
SHALO_RS10020	PF04519	SHALO_RS10020
SHALO_RS10025	PF01551	Peptidase family M23
SHALO_RS10035	PF00990	GGDEF domain
SHALO_RS10040	PF04390	Lipopolysaccharide-assembly
SHALO_RS10045	PF00133	tRNA synthetases class I (I, L, M and V)
SHALO_RS10045	PF09334	tRNA synthetases class I (M)
SHALO_RS10045	PF13603	Leucyl-tRNA synthetase, Domain 2
SHALO_RS10050	PF02355	Protein export membrane protein
SHALO_RS10050	PF07549	SecD/SecF GG Motif
SHALO_RS10055	PF02355	Protein export membrane protein
SHALO_RS10060	PF02699	Preprotein translocase subunit
SHALO_RS10065	PF00795	Carbon-nitrogen hydrolase
SHALO_RS10070	PF00438	S-adenosylmethionine synthetase, N-terminal domain
SHALO_RS10070	PF02772	S-adenosylmethionine synthetase, central domain
SHALO_RS10070	PF02773	S-adenosylmethionine synthetase, C-terminal domain
SHALO_RS10075	PF03547	SHALO_RS10075
SHALO_RS10080	PF03588	Leucyl/phenylalanyl-tRNA protein transferase
SHALO_RS10085	PF00004	ATPase family associated with various cellular activities (AAA)
SHALO_RS10085	PF02861	Clp amino terminal domain
SHALO_RS10085	PF07724	AAA domain (Cdc48 subfamily)
SHALO_RS10085	PF10431	C-terminal, D2-small domain, of ClpB protein
SHALO_RS10090	PF02617	ATP-dependent Clp protease adaptor protein ClpS
SHALO_RS10100	PF01668	SmpB protein
SHALO_RS10105	PF00288	GHMP kinases N terminal domain
SHALO_RS10110	PF02599	Global regulator protein family
SHALO_RS10115	PF01509	TruB family pseudouridylate synthase (N terminal domain)
SHALO_RS10120	PF00580	UvrD/REP helicase N-terminal domain
SHALO_RS10120	PF13361	UvrD-like helicase C-terminal domain
SHALO_RS10125	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SHALO_RS10125	PF03466	LysR substrate binding domain
SHALO_RS10135	PF01432	Peptidase family M3
SHALO_RS10135	PF08439	Oligopeptidase F
SHALO_RS10140	PF01063	Aminotransferase class IV
SHALO_RS10145	PF00425	chorismate binding enzyme
SHALO_RS10150	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
SHALO_RS10150	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
SHALO_RS10155	PF05433	SHALO_RS10155
SHALO_RS10160	PF13500	AAA domain
SHALO_RS10170	PF06445	GyrI-like small molecule binding domain
SHALO_RS10170	PF12833	Helix-turn-helix domain
SHALO_RS10175	PF00155	Aminotransferase class I and II
SHALO_RS10185	PF10670	SHALO_RS10185
SHALO_RS10190	PF01937	Protein of unknown function DUF89
SHALO_RS10195	PF01245	Ribosomal protein L19
SHALO_RS10200	PF01746	tRNA (Guanine-1)-methyltransferase
SHALO_RS10205	PF01782	RimM N-terminal domain
SHALO_RS10210	PF13083	KH domain
SHALO_RS10215	PF00886	Ribosomal protein S16
SHALO_RS10220	PF00448	SRP54-type protein, GTPase domain
SHALO_RS10220	PF02881	SRP54-type protein, helical bundle domain
SHALO_RS10220	PF02978	Signal peptide binding domain
SHALO_RS10225	PF00849	RNA pseudouridylate synthase
SHALO_RS10230	PF04413	3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase)
SHALO_RS10235	PF02591	Putative zinc ribbon domain
SHALO_RS10240	PF01784	NIF3 (NGG1p interacting factor 3)
SHALO_RS10245	PF02091	Glycyl-tRNA synthetase alpha subunit
SHALO_RS10250	PF13118	SHALO_RS10250
SHALO_RS10255	PF00731	AIR carboxylase
SHALO_RS10260	PF01136	SHALO_RS10260
SHALO_RS10270	PF02811	PHP domain
SHALO_RS10275	PF00120	Glutamine synthetase, catalytic domain
SHALO_RS10275	PF03951	Glutamine synthetase, beta-Grasp domain
SHALO_RS10280	PF00905	Penicillin binding protein transpeptidase domain
SHALO_RS10280	PF00912	Transglycosylase
SHALO_RS10285	PF00005	ABC transporter
SHALO_RS10290	PF00155	Aminotransferase class I and II
SHALO_RS10295	PF02545	Maf-like protein
SHALO_RS10305	PF01411	tRNA synthetases class II (A)
SHALO_RS10305	PF02272	DHHA1 domain
SHALO_RS10305	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
SHALO_RS10315	PF00072	Response regulator receiver domain
SHALO_RS10315	PF00486	Transcriptional regulatory protein, C terminal
SHALO_RS10320	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SHALO_RS10320	PF13426	PAS domain
SHALO_RS10325	PF00384	Molybdopterin oxidoreductase
SHALO_RS10325	PF01568	Molydopterin dinucleotide binding domain
SHALO_RS10325	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
SHALO_RS10330	PF12800	4Fe-4S binding domain
SHALO_RS10330	PF13247	4Fe-4S dicluster domain
SHALO_RS10335	PF04976	SHALO_RS10335
SHALO_RS10340	PF02613	Nitrate reductase delta subunit
SHALO_RS10350	PF07603	SHALO_RS10350
SHALO_RS10355	PF13561	Enoyl-(Acyl carrier protein) reductase
SHALO_RS10365	PF00762	Ferrochelatase
SHALO_RS10370	PF00905	Penicillin binding protein transpeptidase domain
SHALO_RS10370	PF03717	Penicillin-binding Protein dimerisation domain
SHALO_RS10375	PF02049	SHALO_RS10375
SHALO_RS10380	PF00460	Flagella basal body rod protein
SHALO_RS10380	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
SHALO_RS10385	PF00460	Flagella basal body rod protein
SHALO_RS10390	PF01098	SHALO_RS10390
SHALO_RS10395	PF03033	Glycosyltransferase family 28 N-terminal domain
SHALO_RS10395	PF04101	Glycosyltransferase family 28 C-terminal domain
SHALO_RS10415	PF13899	Thioredoxin-like
SHALO_RS10420	PF00892	EamA-like transporter family
SHALO_RS10455	PF13231	SHALO_RS10455
SHALO_RS10460	PF00117	Glutamine amidotransferase class-I
SHALO_RS10465	PF07690	Major Facilitator Superfamily
SHALO_RS10470	PF00501	AMP-binding enzyme
SHALO_RS10470	PF01553	Acyltransferase
SHALO_RS10475	PF12840	Helix-turn-helix domain
SHALO_RS10485	PF04909	Amidohydrolase
SHALO_RS10490	PF01874	ATP:dephospho-CoA triphosphoribosyl transferase
SHALO_RS10490	PF03802	SHALO_RS10490
SHALO_RS10495	PF04223	Citrate lyase, alpha subunit (CitF)
SHALO_RS10500	PF03328	HpcH/HpaI aldolase/citrate lyase family
SHALO_RS10505	PF06857	SHALO_RS10505
SHALO_RS10510	PF08218	Citrate lyase ligase C-terminal domain
SHALO_RS10510	PF13673	Acetyltransferase (GNAT) domain
SHALO_RS10515	PF05145	SHALO_RS10515
SHALO_RS10520	PF03573	outer membrane porin, OprD family
SHALO_RS10525	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SHALO_RS10525	PF14689	Sensor_kinase_SpoOB-type, alpha-helical domain
SHALO_RS10525	PF17203	SHALO_RS10525
SHALO_RS10530	PF00072	Response regulator receiver domain
SHALO_RS10530	PF08279	HTH domain
SHALO_RS10535	PF01970	SHALO_RS10535
SHALO_RS10540	PF07331	SHALO_RS10540
SHALO_RS10545	PF03401	Tripartite tricarboxylate transporter family receptor
SHALO_RS10550	PF00072	Response regulator receiver domain
SHALO_RS10550	PF00497	Bacterial extracellular solute-binding proteins, family 3
SHALO_RS10550	PF00512	His Kinase A (phospho-acceptor) domain
SHALO_RS10550	PF01627	Hpt domain
SHALO_RS10550	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SHALO_RS10555	PF00072	Response regulator receiver domain
SHALO_RS10555	PF01966	HD domain
SHALO_RS10560	PF07690	Major Facilitator Superfamily
SHALO_RS10565	PF00156	Phosphoribosyl transferase domain
SHALO_RS10570	PF00860	Permease family
SHALO_RS10575	PF04055	Radical SAM superfamily
SHALO_RS10580	PF03994	SHALO_RS10580
SHALO_RS10585	PF13599	Pentapeptide repeats (9 copies)
SHALO_RS10590	PF00291	Pyridoxal-phosphate dependent enzyme
SHALO_RS10600	PF01966	HD domain
SHALO_RS10600	PF08335	GlnD PII-uridylyltransferase
SHALO_RS10605	PF01380	SIS domain
SHALO_RS10605	PF13522	Glutamine amidotransferase domain
SHALO_RS10610	PF13613	SHALO_RS10610
SHALO_RS10620	PF00990	GGDEF domain
SHALO_RS10625	PF04055	Radical SAM superfamily
SHALO_RS10625	PF13186	Iron-sulfur cluster-binding domain
SHALO_RS10630	PF01230	HIT domain
SHALO_RS10635	PF17033	SHALO_RS10635
SHALO_RS10635	PF17129	SHALO_RS10635
SHALO_RS10640	PF00563	EAL domain
SHALO_RS10640	PF08668	HDOD domain
SHALO_RS10645	PF10262	Rdx family
SHALO_RS10650	PF00520	Ion transport protein
SHALO_RS10650	PF02254	TrkA-N domain
SHALO_RS10655	PF02254	TrkA-N domain
SHALO_RS10660	PF03547	SHALO_RS10660
SHALO_RS10665	PF01253	Translation initiation factor SUI1
SHALO_RS10670	PF00005	ABC transporter
SHALO_RS10670	PF12848	ABC transporter
SHALO_RS10675	PF00563	EAL domain
SHALO_RS10675	PF00990	GGDEF domain
SHALO_RS10680	PF12838	4Fe-4S dicluster domain
SHALO_RS10690	PF13359	SHALO_RS10690
SHALO_RS10695	PF13613	SHALO_RS10695
SHALO_RS10700	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
SHALO_RS10705	PF00146	NADH dehydrogenase
SHALO_RS10710	PF00420	NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
SHALO_RS10715	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
SHALO_RS10715	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
SHALO_RS10720	PF00329	Respiratory-chain NADH dehydrogenase, 30 Kd subunit
SHALO_RS10720	PF00346	Respiratory-chain NADH dehydrogenase, 49 Kd subunit
SHALO_RS10720	PF00374	Nickel-dependent hydrogenase
SHALO_RS10725	PF12838	4Fe-4S dicluster domain
SHALO_RS10730	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
SHALO_RS10735	PF07450	SHALO_RS10735
SHALO_RS10745	PF13641	Glycosyltransferase like family 2
SHALO_RS10750	PF01314	Aldehyde ferredoxin oxidoreductase, domains 2 & 3
SHALO_RS10750	PF02730	Aldehyde ferredoxin oxidoreductase, N-terminal domain
SHALO_RS10755	PF02597	ThiS family
SHALO_RS10760	PF02597	ThiS family
SHALO_RS10765	PF00899	ThiF family
SHALO_RS10770	PF00990	GGDEF domain
SHALO_RS10785	PF14602	Hexapeptide repeat of succinyl-transferase
SHALO_RS10785	PF14789	Tetrahydrodipicolinate N-succinyltransferase middle
SHALO_RS10785	PF14790	Tetrahydrodipicolinate N-succinyltransferase N-terminal
SHALO_RS10790	PF01883	Domain of unknown function DUF59
SHALO_RS10790	PF10609	ParA/MinD ATPase like
SHALO_RS10795	PF01128	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
SHALO_RS10795	PF02542	YgbB family
SHALO_RS10800	PF00072	Response regulator receiver domain
SHALO_RS10805	PF01747	ATP-sulfurylase
SHALO_RS10805	PF14306	PUA-like domain
SHALO_RS10810	PF07238	PilZ domain
SHALO_RS10815	PF04608	Phosphatidylglycerophosphatase A
SHALO_RS10820	PF04264	YceI-like domain
SHALO_RS10825	PF01205	Uncharacterized protein family UPF0029
SHALO_RS10830	PF01729	Quinolinate phosphoribosyl transferase, C-terminal domain
SHALO_RS10830	PF02749	Quinolinate phosphoribosyl transferase, N-terminal domain
SHALO_RS10835	PF00528	Binding-protein-dependent transport system inner membrane component
SHALO_RS10840	PF13531	Bacterial extracellular solute-binding protein
SHALO_RS10845	PF00005	ABC transporter
SHALO_RS10850	PF00528	Binding-protein-dependent transport system inner membrane component
SHALO_RS10855	PF03459	TOBE domain
SHALO_RS10860	PF13531	Bacterial extracellular solute-binding protein
SHALO_RS10865	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SHALO_RS10865	PF03459	TOBE domain
SHALO_RS10870	PF00768	D-alanyl-D-alanine carboxypeptidase
SHALO_RS10875	PF03807	NADP oxidoreductase coenzyme F420-dependent
SHALO_RS10875	PF14748	Pyrroline-5-carboxylate reductase dimerisation
SHALO_RS10880	PF02687	SHALO_RS10880
SHALO_RS10880	PF12704	MacB-like periplasmic core domain
SHALO_RS10885	PF00005	ABC transporter
SHALO_RS10890	PF16576	SHALO_RS10890
SHALO_RS10895	PF02321	Outer membrane efflux protein
SHALO_RS10900	PF02582	SHALO_RS10900
SHALO_RS10905	PF11391	SHALO_RS10905
SHALO_RS10910	PF00924	Mechanosensitive ion channel
SHALO_RS10910	PF05552	Conserved TM helix
SHALO_RS10915	PF07883	Cupin domain
SHALO_RS10930	PF03364	Polyketide cyclase / dehydrase and lipid transport
SHALO_RS10935	PF08238	Sel1 repeat
SHALO_RS10940	PF02311	AraC-like ligand binding domain
SHALO_RS10940	PF12833	Helix-turn-helix domain
SHALO_RS10945	PF01810	SHALO_RS10945
SHALO_RS10955	PF03176	MMPL family
SHALO_RS10960	PF09982	Uncharacterized protein conserved in bacteria (DUF2219)
SHALO_RS10970	PF05170	SHALO_RS10970
SHALO_RS10970	PF13502	SHALO_RS10970
SHALO_RS10975	PF00215	Orotidine 5'-phosphate decarboxylase / HUMPS family
SHALO_RS10980	PF01029	NusB family
SHALO_RS10985	PF00885	6,7-dimethyl-8-ribityllumazine synthase
SHALO_RS10990	PF01184	SHALO_RS10990
SHALO_RS10995	PF03781	Sulfatase-modifying factor enzyme 1
SHALO_RS10995	PF08241	Methyltransferase domain
SHALO_RS10995	PF12867	DinB superfamily
SHALO_RS11000	PF00793	DAHP synthetase I family
SHALO_RS11005	PF00892	EamA-like transporter family
SHALO_RS11010	PF00924	Mechanosensitive ion channel
SHALO_RS11015	PF01926	50S ribosome-binding GTPase
SHALO_RS11015	PF14714	KH-domain-like of EngA bacterial GTPase enzymes, C-terminal
SHALO_RS11020	PF01202	Shikimate kinase
SHALO_RS11025	PF00579	tRNA synthetases class I (W and Y)
SHALO_RS11030	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
SHALO_RS11030	PF02403	Seryl-tRNA synthetase N-terminal domain
SHALO_RS11035	PF13181	Tetratricopeptide repeat
SHALO_RS11035	PF13432	Tetratricopeptide repeat
SHALO_RS11040	PF00682	HMGL-like
SHALO_RS11040	PF08502	LeuA allosteric (dimerisation) domain
SHALO_RS11045	PF01066	CDP-alcohol phosphatidyltransferase
SHALO_RS11050	PF02666	SHALO_RS11050
SHALO_RS11055	PF00004	ATPase family associated with various cellular activities (AAA)
SHALO_RS11055	PF01434	Peptidase family M41
SHALO_RS11055	PF06480	FtsH Extracellular
SHALO_RS11060	PF06325	Ribosomal protein L11 methyltransferase (PrmA)
SHALO_RS11065	PF00072	Response regulator receiver domain
SHALO_RS11070	PF00977	Histidine biosynthesis protein
SHALO_RS11075	PF00117	Glutamine amidotransferase class-I
SHALO_RS11085	PF02516	Oligosaccharyl transferase STT3 subunit
SHALO_RS11090	PF02719	Polysaccharide biosynthesis protein
SHALO_RS11095	PF00953	Glycosyl transferase family 4
SHALO_RS11105	PF01370	NAD dependent epimerase/dehydratase family
SHALO_RS11110	PF14602	Hexapeptide repeat of succinyl-transferase
SHALO_RS11120	PF00132	Bacterial transferase hexapeptide (six repeats)
SHALO_RS11120	PF14602	Hexapeptide repeat of succinyl-transferase
SHALO_RS11125	PF00535	Glycosyl transferase family 2
SHALO_RS11135	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
SHALO_RS11140	PF01370	NAD dependent epimerase/dehydratase family
SHALO_RS11145	PF01370	NAD dependent epimerase/dehydratase family
SHALO_RS11150	PF00682	HMGL-like
SHALO_RS11150	PF07836	DmpG-like communication domain
SHALO_RS11155	PF01118	Semialdehyde dehydrogenase, NAD binding domain
SHALO_RS11155	PF09290	Prokaryotic acetaldehyde dehydrogenase, dimerisation
SHALO_RS11160	PF00205	Thiamine pyrophosphate enzyme, central domain
SHALO_RS11160	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
SHALO_RS11160	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
SHALO_RS11165	PF16363	SHALO_RS11165
SHALO_RS11170	PF00483	Nucleotidyl transferase
SHALO_RS11175	PF01370	NAD dependent epimerase/dehydratase family
SHALO_RS11185	PF16363	SHALO_RS11185
SHALO_RS11190	PF00483	Nucleotidyl transferase
SHALO_RS11190	PF01050	Mannose-6-phosphate isomerase
SHALO_RS11195	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
SHALO_RS11195	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
SHALO_RS11195	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
SHALO_RS11200	PF01068	ATP dependent DNA ligase domain
SHALO_RS11200	PF14743	DNA ligase OB-like domain
SHALO_RS11205	PF16363	SHALO_RS11205
SHALO_RS11210	PF00483	Nucleotidyl transferase
SHALO_RS11215	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
SHALO_RS11215	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
SHALO_RS11215	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
SHALO_RS11215	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
SHALO_RS11220	PF10108	Predicted 3'-5' exonuclease related to the exonuclease domain of PolB
SHALO_RS11225	PF03279	SHALO_RS11225
SHALO_RS11230	PF03279	SHALO_RS11230
SHALO_RS11235	PF06258	SHALO_RS11235
SHALO_RS11240	PF00534	Glycosyl transferases group 1
SHALO_RS11240	PF13439	Glycosyltransferase Family 4
SHALO_RS11245	PF04932	SHALO_RS11245
SHALO_RS11250	PF00534	Glycosyl transferases group 1
SHALO_RS11255	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
SHALO_RS11260	PF00852	Glycosyltransferase family 10 (fucosyltransferase)
SHALO_RS11265	PF13580	SIS domain
SHALO_RS11270	PF00294	pfkB family carbohydrate kinase
SHALO_RS11270	PF01467	Cytidylyltransferase
SHALO_RS11275	PF13242	HAD-hyrolase-like
SHALO_RS11280	PF13181	Tetratricopeptide repeat
SHALO_RS11285	PF13442	Cytochrome C oxidase, cbb3-type, subunit III
SHALO_RS11290	PF03597	SHALO_RS11290
SHALO_RS11295	PF00122	E1-E2 ATPase
SHALO_RS11295	PF00403	Heavy-metal-associated domain
SHALO_RS11295	PF00702	haloacid dehalogenase-like hydrolase
SHALO_RS11295	PF12156	SHALO_RS11295
SHALO_RS11300	PF00563	EAL domain
SHALO_RS11300	PF00990	GGDEF domain
SHALO_RS11305	PF00892	EamA-like transporter family
SHALO_RS11310	PF01966	HD domain
SHALO_RS11315	PF08534	Redoxin
SHALO_RS11325	PF02578	Multi-copper polyphenol oxidoreductase laccase
SHALO_RS11330	PF00677	Lumazine binding domain
SHALO_RS11335	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
SHALO_RS11335	PF00672	HAMP domain
SHALO_RS11335	PF14827	Sensory domain of two-component sensor kinase
SHALO_RS11340	PF02626	Allophanate hydrolase subunit 2
SHALO_RS11345	PF02682	Allophanate hydrolase subunit 1
SHALO_RS11350	PF03746	LamB/YcsF family
SHALO_RS11355	PF06808	SHALO_RS11355
SHALO_RS11360	PF04290	SHALO_RS11360
SHALO_RS11365	PF03480	Bacterial extracellular solute-binding protein, family 7
SHALO_RS11370	PF00072	Response regulator receiver domain
SHALO_RS11370	PF00486	Transcriptional regulatory protein, C terminal
SHALO_RS11375	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SHALO_RS11375	PF08269	Cache domain
SHALO_RS11380	PF01134	Glucose inhibited division protein A
SHALO_RS11380	PF13932	GidA associated domain 3
SHALO_RS11385	PF00355	Rieske [2Fe-2S] domain
SHALO_RS11390	PF00032	Cytochrome b(C-terminal)/b6/petD
SHALO_RS11390	PF00033	Cytochrome b(N-terminal)/b6/petB
SHALO_RS11395	PF00034	Cytochrome c
SHALO_RS11405	PF03255	Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit
SHALO_RS11410	PF00109	Beta-ketoacyl synthase, N-terminal domain
SHALO_RS11410	PF02801	Beta-ketoacyl synthase, C-terminal domain
SHALO_RS11415	PF00550	Phosphopantetheine attachment site
SHALO_RS11420	PF13561	Enoyl-(Acyl carrier protein) reductase
SHALO_RS11425	PF01676	Metalloenzyme superfamily
SHALO_RS11425	PF06415	BPG-independent PGAM N-terminus (iPGM_N)
SHALO_RS11430	PF00953	Glycosyl transferase family 4
SHALO_RS11435	PF08245	Mur ligase middle domain
SHALO_RS11445	PF02397	SHALO_RS11445
SHALO_RS11450	PF01695	IstB-like ATP binding protein
SHALO_RS11455	PF00665	Integrase core domain
SHALO_RS11455	PF13384	Homeodomain-like domain
SHALO_RS11460	PF10543	SHALO_RS11460
SHALO_RS11465	PF01061	SHALO_RS11465
SHALO_RS11470	PF16363	SHALO_RS11470
SHALO_RS11475	PF04321	RmlD substrate binding domain
SHALO_RS11480	PF00908	dTDP-4-dehydrorhamnose 3,5-epimerase
SHALO_RS11485	PF00483	Nucleotidyl transferase
SHALO_RS11490	PF16363	SHALO_RS11490
SHALO_RS11495	PF00384	Molybdopterin oxidoreductase
SHALO_RS11495	PF01568	Molydopterin dinucleotide binding domain
SHALO_RS11500	PF03916	SHALO_RS11500
SHALO_RS11505	PF12800	4Fe-4S binding domain
SHALO_RS11505	PF13247	4Fe-4S dicluster domain
SHALO_RS11510	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SHALO_RS11515	PF00072	Response regulator receiver domain
SHALO_RS11515	PF00486	Transcriptional regulatory protein, C terminal
SHALO_RS11530	PF00563	EAL domain
SHALO_RS11530	PF00990	GGDEF domain
SHALO_RS11540	PF00497	Bacterial extracellular solute-binding proteins, family 3
SHALO_RS11545	PF03649	SHALO_RS11545
SHALO_RS11550	PF00289	Carbamoyl-phosphate synthase L chain, N-terminal domain
SHALO_RS11550	PF02785	Biotin carboxylase C-terminal domain
SHALO_RS11550	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
SHALO_RS11565	PF01384	SHALO_RS11565
SHALO_RS11570	PF00270	DEAD/DEAH box helicase
SHALO_RS11570	PF00271	Helicase conserved C-terminal domain
SHALO_RS11575	PF02639	SHALO_RS11575
SHALO_RS11580	PF01609	Transposase DDE domain
SHALO_RS11595	PF00892	EamA-like transporter family
SHALO_RS11600	PF02222	ATP-grasp domain
SHALO_RS11605	PF00654	Voltage gated chloride channel
SHALO_RS11610	PF04463	SHALO_RS11610
SHALO_RS11615	PF00465	Iron-containing alcohol dehydrogenase
SHALO_RS11620	PF01841	Transglutaminase-like superfamily
SHALO_RS11625	PF04237	YjbR
SHALO_RS11630	PF03352	Methyladenine glycosylase
SHALO_RS11640	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
SHALO_RS11645	PF00691	OmpA family
SHALO_RS11645	PF13505	Outer membrane protein beta-barrel domain
SHALO_RS11650	PF00924	Mechanosensitive ion channel
SHALO_RS11655	PF13852	SHALO_RS11655
SHALO_RS11660	PF13419	Haloacid dehalogenase-like hydrolase
SHALO_RS11665	PF01558	Pyruvate ferredoxin/flavodoxin oxidoreductase
SHALO_RS11665	PF01855	Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg
SHALO_RS11665	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
SHALO_RS11665	PF10371	Domain of unknown function
SHALO_RS11665	PF13484	SHALO_RS11665
SHALO_RS11665	PF17147	SHALO_RS11665
SHALO_RS11670	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
SHALO_RS11670	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
SHALO_RS11690	PF02690	SHALO_RS11690
SHALO_RS11695	PF02664	S-Ribosylhomocysteinase (LuxS)
SHALO_RS11700	PF00375	Sodium:dicarboxylate symporter family
SHALO_RS11705	PF01243	Pyridoxamine 5'-phosphate oxidase
SHALO_RS11710	PF00581	Rhodanese-like domain
SHALO_RS11715	PF01814	Hemerythrin HHE cation binding domain
SHALO_RS11720	PF00529	HlyD family secretion protein
SHALO_RS11720	PF16576	SHALO_RS11720
SHALO_RS11725	PF00873	AcrB/AcrD/AcrF family
SHALO_RS11730	PF02321	Outer membrane efflux protein
SHALO_RS11735	PF07690	Major Facilitator Superfamily
SHALO_RS11745	PF07690	Major Facilitator Superfamily
SHALO_RS11750	PF12833	Helix-turn-helix domain
SHALO_RS11755	PF00999	Sodium/hydrogen exchanger family
SHALO_RS11760	PF02562	PhoH-like protein
SHALO_RS11760	PF13638	PIN domain
SHALO_RS11765	PF00149	Calcineurin-like phosphoesterase
SHALO_RS11770	PF01734	Patatin-like phospholipase
SHALO_RS11775	PF08761	dUTPase
SHALO_RS11780	PF01242	6-pyruvoyl tetrahydropterin synthase
SHALO_RS11785	PF04055	Radical SAM superfamily
SHALO_RS11785	PF13353	4Fe-4S single cluster domain
SHALO_RS11790	PF06508	Queuosine biosynthesis protein QueC
SHALO_RS11795	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SHALO_RS11795	PF05228	SHALO_RS11795
SHALO_RS11800	PF02525	Flavodoxin-like fold
SHALO_RS11805	PF01638	HxlR-like helix-turn-helix
SHALO_RS11815	PF04120	SHALO_RS11815
SHALO_RS11820	PF03061	Thioesterase superfamily
SHALO_RS11825	PF00512	His Kinase A (phospho-acceptor) domain
SHALO_RS11825	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SHALO_RS11830	PF00072	Response regulator receiver domain
SHALO_RS11830	PF00486	Transcriptional regulatory protein, C terminal
SHALO_RS11835	PF01895	PhoU domain
SHALO_RS11840	PF01553	Acyltransferase
SHALO_RS11840	PF13444	Acetyltransferase (GNAT) domain
SHALO_RS11845	PF13173	AAA domain
SHALO_RS11845	PF13635	SHALO_RS11845
SHALO_RS11850	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
SHALO_RS11855	PF02900	Catalytic LigB subunit of aromatic ring-opening dioxygenase
SHALO_RS11860	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
SHALO_RS11860	PF00672	HAMP domain
SHALO_RS11865	PF12849	PBP superfamily domain
SHALO_RS11870	PF00528	Binding-protein-dependent transport system inner membrane component
SHALO_RS11870	PF12501	SHALO_RS11870
SHALO_RS11875	PF00528	Binding-protein-dependent transport system inner membrane component
SHALO_RS11875	PF11812	SHALO_RS11875
SHALO_RS11880	PF00005	ABC transporter
SHALO_RS11885	PF03692	SHALO_RS11885
SHALO_RS11885	PF07277	SHALO_RS11885
SHALO_RS11890	PF00486	Transcriptional regulatory protein, C terminal
SHALO_RS11895	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
SHALO_RS11895	PF00672	HAMP domain
SHALO_RS11895	PF02743	Cache domain
SHALO_RS11900	PF05538	SHALO_RS11900
SHALO_RS11905	PF03264	NapC/NirT cytochrome c family, N-terminal region
SHALO_RS11910	PF14537	Cytochrome c3
SHALO_RS11915	PF00890	FAD binding domain
SHALO_RS11920	PF01609	Transposase DDE domain
SHALO_RS11930	PF09907	SHALO_RS11930
SHALO_RS11935	PF00380	Ribosomal protein S9/S16
SHALO_RS11940	PF00572	Ribosomal protein L13
SHALO_RS11945	PF00580	UvrD/REP helicase N-terminal domain
SHALO_RS11945	PF12705	PD-(D/E)XK nuclease superfamily
SHALO_RS11945	PF13361	UvrD-like helicase C-terminal domain
SHALO_RS11950	PF12705	PD-(D/E)XK nuclease superfamily
SHALO_RS11955	PF05751	SHALO_RS11955
SHALO_RS11965	PF13179	SHALO_RS11965
SHALO_RS11970	PF13442	Cytochrome C oxidase, cbb3-type, subunit III
SHALO_RS11970	PF14715	N-terminal domain of cytochrome oxidase-cbb3, FixP
SHALO_RS11975	PF05545	SHALO_RS11975
SHALO_RS11980	PF02433	Cytochrome C oxidase, mono-heme subunit/FixO
SHALO_RS11985	PF00115	Cytochrome C and Quinol oxidase polypeptide I
SHALO_RS11990	PF00072	Response regulator receiver domain
SHALO_RS11990	PF00486	Transcriptional regulatory protein, C terminal
SHALO_RS11995	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SHALO_RS11995	PF08447	PAS fold
SHALO_RS12000	PF13386	SHALO_RS12000
SHALO_RS12005	PF00117	Glutamine amidotransferase class-I
SHALO_RS12005	PF00988	Carbamoyl-phosphate synthase small chain, CPSase domain
SHALO_RS12010	PF04368	SHALO_RS12010
SHALO_RS12020	PF02050	Flagellar FliJ protein
SHALO_RS12025	PF00709	Adenylosuccinate synthetase
SHALO_RS12030	PF13393	Histidyl-tRNA synthetase
SHALO_RS12035	PF00266	Aminotransferase class-V
SHALO_RS12040	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
SHALO_RS12040	PF00672	HAMP domain
SHALO_RS12040	PF02743	Cache domain
SHALO_RS12045	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
SHALO_RS12045	PF00672	HAMP domain
SHALO_RS12045	PF02743	Cache domain
SHALO_RS12050	PF13419	Haloacid dehalogenase-like hydrolase
SHALO_RS12055	PF00456	Transketolase, thiamine diphosphate binding domain
SHALO_RS12055	PF02779	Transketolase, pyrimidine binding domain
SHALO_RS12060	PF00348	Polyprenyl synthetase
SHALO_RS12065	PF00595	PDZ domain (Also known as DHR or GLGF)
SHALO_RS12065	PF13180	PDZ domain
SHALO_RS12070	PF02575	YbaB/EbfC DNA-binding family
SHALO_RS12075	PF02261	Aspartate decarboxylase
SHALO_RS12080	PF02875	Mur ligase family, glutamate ligase domain
SHALO_RS12080	PF08245	Mur ligase middle domain
SHALO_RS12090	PF01106	NifU-like domain
SHALO_RS12095	PF01196	Ribosomal protein L17
SHALO_RS12100	PF01000	RNA polymerase Rpb3/RpoA insert domain
SHALO_RS12100	PF01193	RNA polymerase Rpb3/Rpb11 dimerisation domain
SHALO_RS12100	PF03118	Bacterial RNA polymerase, alpha chain C terminal domain
SHALO_RS12105	PF00163	Ribosomal protein S4/S9 N-terminal domain
SHALO_RS12105	PF01479	S4 domain
SHALO_RS12110	PF00411	Ribosomal protein S11
SHALO_RS12115	PF00416	Ribosomal protein S13/S18
SHALO_RS12120	PF00444	Ribosomal protein L36
SHALO_RS12125	PF01176	Translation initiation factor 1A / IF-1
SHALO_RS12130	PF00557	Metallopeptidase family M24
SHALO_RS12135	PF00344	SecY translocase
SHALO_RS12140	PF00828	Ribosomal protein L18e/L15
SHALO_RS12145	PF00333	Ribosomal protein S5, N-terminal domain
SHALO_RS12145	PF03719	Ribosomal protein S5, C-terminal domain
SHALO_RS12150	PF00861	Ribosomal L18p/L5e family
SHALO_RS12155	PF00347	Ribosomal protein L6
SHALO_RS12160	PF00410	Ribosomal protein S8
SHALO_RS12165	PF00253	Ribosomal protein S14p/S29e
SHALO_RS12170	PF00281	Ribosomal protein L5
SHALO_RS12170	PF00673	ribosomal L5P family C-terminus
SHALO_RS12175	PF00467	KOW motif
SHALO_RS12175	PF17136	SHALO_RS12175
SHALO_RS12180	PF00238	Ribosomal protein L14p/L23e
SHALO_RS12185	PF00366	Ribosomal protein S17
SHALO_RS12190	PF00831	Ribosomal L29 protein
SHALO_RS12195	PF00252	Ribosomal protein L16p/L10e
SHALO_RS12200	PF00189	Ribosomal protein S3, C-terminal domain
SHALO_RS12200	PF07650	KH domain
SHALO_RS12205	PF00237	Ribosomal protein L22p/L17e
SHALO_RS12210	PF00203	Ribosomal protein S19
SHALO_RS12215	PF00181	Ribosomal Proteins L2, RNA binding domain
SHALO_RS12215	PF03947	Ribosomal Proteins L2, C-terminal domain
SHALO_RS12220	PF00276	Ribosomal protein L23
SHALO_RS12225	PF00573	Ribosomal protein L4/L1 family
SHALO_RS12230	PF00297	Ribosomal protein L3
SHALO_RS12235	PF00338	Ribosomal protein S10p/S20e
SHALO_RS12245	PF07228	Stage II sporulation protein E (SpoIIE)
SHALO_RS12245	PF13581	Histidine kinase-like ATPase domain
SHALO_RS12250	PF01351	Ribonuclease HII
SHALO_RS12255	PF03239	SHALO_RS12255
SHALO_RS12260	PF10634	Fe2+ transport protein
SHALO_RS12265	PF04945	YHS domain
SHALO_RS12265	PF10080	SHALO_RS12265
SHALO_RS12270	PF02687	SHALO_RS12270
SHALO_RS12270	PF12704	MacB-like periplasmic core domain
SHALO_RS12275	PF02687	SHALO_RS12275
SHALO_RS12280	PF00005	ABC transporter
SHALO_RS12285	PF00578	AhpC/TSA family
SHALO_RS12290	PF00578	AhpC/TSA family
SHALO_RS12295	PF04023	FeoA domain
SHALO_RS12300	PF02421	Ferrous iron transport protein B
SHALO_RS12300	PF07664	SHALO_RS12300
SHALO_RS12300	PF07670	Nucleoside recognition
SHALO_RS12305	PF01264	Chorismate synthase
SHALO_RS12310	PF00035	Double-stranded RNA binding motif
SHALO_RS12310	PF14622	Ribonuclease-III-like
SHALO_RS12315	PF00075	RNase H
SHALO_RS12320	PF13176	Tetratricopeptide repeat
SHALO_RS12325	PF01807	CHC2 zinc finger
SHALO_RS12325	PF08275	DNA primase catalytic core, N-terminal domain
SHALO_RS12325	PF10410	DnaB-helicase binding domain of primase
SHALO_RS12325	PF13662	Toprim domain
SHALO_RS12325	PF16730	SHALO_RS12325
SHALO_RS12330	PF00764	Arginosuccinate synthase
SHALO_RS12335	PF00072	Response regulator receiver domain
SHALO_RS12345	PF00989	PAS fold
SHALO_RS12345	PF00990	GGDEF domain
SHALO_RS12350	PF00072	Response regulator receiver domain
SHALO_RS12355	PF00512	His Kinase A (phospho-acceptor) domain
SHALO_RS12355	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SHALO_RS12355	PF13426	PAS domain
SHALO_RS12360	PF00072	Response regulator receiver domain
SHALO_RS12360	PF01339	CheB methylesterase
SHALO_RS12365	PF03975	CheD chemotactic sensory transduction
SHALO_RS12370	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SHALO_RS12375	PF01739	CheR methyltransferase, SAM binding domain
SHALO_RS12375	PF03705	CheR methyltransferase, all-alpha domain
SHALO_RS12380	PF01584	CheW-like domain
SHALO_RS12380	PF01627	Hpt domain
SHALO_RS12380	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SHALO_RS12380	PF02895	Signal transducing histidine kinase, homodimeric domain
SHALO_RS12390	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
SHALO_RS12395	PF01584	CheW-like domain
SHALO_RS12400	PF00072	Response regulator receiver domain
SHALO_RS12405	PF00226	DnaJ domain
SHALO_RS12420	PF02635	DsrE/DsrF-like family
SHALO_RS12425	PF02872	5'-nucleotidase, C-terminal domain
SHALO_RS12440	PF08770	Sulphur oxidation protein SoxZ
SHALO_RS12445	PF13501	Sulfur oxidation protein SoxY
SHALO_RS12450	PF13442	Cytochrome C oxidase, cbb3-type, subunit III
SHALO_RS12455	PF13442	Cytochrome C oxidase, cbb3-type, subunit III
SHALO_RS12460	PF00174	Oxidoreductase molybdopterin binding domain
SHALO_RS12460	PF03404	Mo-co oxidoreductase dimerisation domain
SHALO_RS12465	PF05448	Acetyl xylan esterase (AXE1)
SHALO_RS12470	PF00805	Pentapeptide repeats (8 copies)
SHALO_RS12475	PF13899	Thioredoxin-like
SHALO_RS12480	PF02683	SHALO_RS12480
SHALO_RS12485	PF01966	HD domain
SHALO_RS12485	PF13286	Phosphohydrolase-associated domain
SHALO_RS12490	PF01841	Transglutaminase-like superfamily
SHALO_RS12495	PF03994	SHALO_RS12495
SHALO_RS12505	PF13310	SHALO_RS12505
SHALO_RS12510	PF13310	SHALO_RS12510
SHALO_RS12520	PF04245	SHALO_RS12520
SHALO_RS12525	PF04266	ASCH domain
SHALO_RS12540	PF04012	SHALO_RS12540
SHALO_RS12545	PF07290	SHALO_RS12545
SHALO_RS12550	PF01145	SPFH domain / Band 7 family
SHALO_RS12550	PF15975	SHALO_RS12550
SHALO_RS12555	PF13189	Cytidylate kinase-like family
SHALO_RS12565	PF00122	E1-E2 ATPase
SHALO_RS12565	PF00702	haloacid dehalogenase-like hydrolase
SHALO_RS12595	PF01475	Ferric uptake regulator family
SHALO_RS12600	PF13609	Gram-negative porin
SHALO_RS12610	PF03929	SHALO_RS12610
SHALO_RS12620	PF00593	TonB dependent receptor
SHALO_RS12620	PF07715	TonB-dependent Receptor Plug Domain
SHALO_RS12625	PF00072	Response regulator receiver domain
SHALO_RS12625	PF00486	Transcriptional regulatory protein, C terminal
SHALO_RS12630	PF00672	HAMP domain
SHALO_RS12630	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SHALO_RS12630	PF07568	SHALO_RS12630
SHALO_RS12630	PF08269	Cache domain
SHALO_RS12635	PF02421	Ferrous iron transport protein B
SHALO_RS12635	PF07664	SHALO_RS12635
SHALO_RS12635	PF07670	Nucleoside recognition
SHALO_RS12640	PF04023	FeoA domain
SHALO_RS12650	PF00593	TonB dependent receptor
SHALO_RS12650	PF07660	Secretin and TonB N terminus short domain
SHALO_RS12650	PF07715	TonB-dependent Receptor Plug Domain
SHALO_RS12655	PF04773	FecR protein
SHALO_RS12655	PF16220	SHALO_RS12655
SHALO_RS12655	PF16344	SHALO_RS12655
SHALO_RS12660	PF04542	Sigma-70 region 2
SHALO_RS12660	PF08281	Sigma-70, region 4
SHALO_RS12665	PF00756	Putative esterase
SHALO_RS12665	PF11806	Domain of unknown function (DUF3327)
SHALO_RS12670	PF00593	TonB dependent receptor
SHALO_RS12670	PF07715	TonB-dependent Receptor Plug Domain
SHALO_RS12675	PF03544	Gram-negative bacterial TonB protein C-terminal
SHALO_RS12680	PF02472	Biopolymer transport protein ExbD/TolR
SHALO_RS12685	PF01618	SHALO_RS12685
SHALO_RS12690	PF01545	Cation efflux family
SHALO_RS12695	PF02659	SHALO_RS12695
SHALO_RS12700	PF07690	Major Facilitator Superfamily
SHALO_RS12705	PF07690	Major Facilitator Superfamily
SHALO_RS12710	PF00005	ABC transporter
SHALO_RS12710	PF00664	ABC transporter transmembrane region
SHALO_RS12715	PF00005	ABC transporter
SHALO_RS12715	PF00664	ABC transporter transmembrane region
SHALO_RS12720	PF00593	TonB dependent receptor
SHALO_RS12720	PF07715	TonB-dependent Receptor Plug Domain
SHALO_RS12725	PF00593	TonB dependent receptor
SHALO_RS12725	PF07715	TonB-dependent Receptor Plug Domain
SHALO_RS12730	PF12833	Helix-turn-helix domain
SHALO_RS12735	PF12833	Helix-turn-helix domain
SHALO_RS12740	PF00990	GGDEF domain
SHALO_RS12750	PF00563	EAL domain
SHALO_RS12755	PF10087	SHALO_RS12755
SHALO_RS12760	PF12974	ABC transporter, phosphonate, periplasmic substrate-binding protein
SHALO_RS12765	PF00005	ABC transporter
SHALO_RS12770	PF00528	Binding-protein-dependent transport system inner membrane component
SHALO_RS12775	PF00528	Binding-protein-dependent transport system inner membrane component
SHALO_RS12780	PF13242	HAD-hyrolase-like
SHALO_RS12780	PF13344	Haloacid dehalogenase-like hydrolase
SHALO_RS12785	PF02694	SHALO_RS12785
SHALO_RS12790	PF06226	SHALO_RS12790
SHALO_RS12795	PF03824	SHALO_RS12795
SHALO_RS12800	PF03824	SHALO_RS12800
SHALO_RS12805	PF06226	SHALO_RS12805
SHALO_RS12810	PF00258	Flavodoxin
SHALO_RS12820	PF01810	SHALO_RS12820
SHALO_RS12825	PF01370	NAD dependent epimerase/dehydratase family
SHALO_RS12825	PF08338	Domain of unknown function (DUF1731)
SHALO_RS12840	PF00005	ABC transporter
SHALO_RS12845	PF02687	SHALO_RS12845
SHALO_RS12855	PF01810	SHALO_RS12855
SHALO_RS12860	PF03960	ArsC family
SHALO_RS12865	PF00672	HAMP domain
SHALO_RS12865	PF00990	GGDEF domain
SHALO_RS12865	PF08448	PAS fold
SHALO_RS12870	PF00892	EamA-like transporter family
SHALO_RS12875	PF00072	Response regulator receiver domain
SHALO_RS12875	PF00486	Transcriptional regulatory protein, C terminal
SHALO_RS12880	PF00512	His Kinase A (phospho-acceptor) domain
SHALO_RS12880	PF00672	HAMP domain
SHALO_RS12880	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SHALO_RS12885	PF00884	Sulfatase
SHALO_RS12885	PF08019	SHALO_RS12885
SHALO_RS12890	PF03167	Uracil DNA glycosylase superfamily
SHALO_RS12895	PF00563	EAL domain
SHALO_RS12905	PF05016	Plasmid stabilisation system protein
SHALO_RS12910	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SHALO_RS12910	PF08448	PAS fold
SHALO_RS12910	PF13426	PAS domain
SHALO_RS12915	PF00512	His Kinase A (phospho-acceptor) domain
SHALO_RS12915	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SHALO_RS12915	PF08448	PAS fold
SHALO_RS12915	PF13426	PAS domain
SHALO_RS12920	PF00072	Response regulator receiver domain
SHALO_RS12925	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
SHALO_RS12925	PF13682	Chemoreceptor zinc-binding domain
SHALO_RS12930	PF02579	Dinitrogenase iron-molybdenum cofactor
SHALO_RS12935	PF02001	SHALO_RS12935
SHALO_RS12940	PF02673	SHALO_RS12940
SHALO_RS12945	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
SHALO_RS12945	PF13378	Enolase C-terminal domain-like
SHALO_RS12950	PF03180	NLPA lipoprotein
SHALO_RS12955	PF00528	Binding-protein-dependent transport system inner membrane component
SHALO_RS12960	PF00005	ABC transporter
SHALO_RS12965	PF06050	2-hydroxyglutaryl-CoA dehydratase, D-component
SHALO_RS12970	PF06050	2-hydroxyglutaryl-CoA dehydratase, D-component
SHALO_RS12975	PF01869	BadF/BadG/BcrA/BcrD ATPase family
SHALO_RS12990	PF15738	SHALO_RS12990
SHALO_RS12995	PF13437	HlyD family secretion protein
SHALO_RS13000	PF00005	ABC transporter
SHALO_RS13000	PF00664	ABC transporter transmembrane region
SHALO_RS13000	PF03412	Peptidase C39 family
SHALO_RS13005	PF00353	Hemolysin-type calcium-binding repeat (2 copies)
SHALO_RS13015	PF00515	Tetratricopeptide repeat
SHALO_RS13015	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
SHALO_RS13015	PF13181	Tetratricopeptide repeat
SHALO_RS13015	PF13432	Tetratricopeptide repeat
SHALO_RS13020	PF02321	Outer membrane efflux protein
SHALO_RS13030	PF01618	SHALO_RS13030
SHALO_RS13035	PF01497	Periplasmic binding protein
SHALO_RS13040	PF13649	Methyltransferase domain
SHALO_RS13045	PF07715	TonB-dependent Receptor Plug Domain
SHALO_RS13050	PF00206	Lyase
SHALO_RS13050	PF10415	Fumarase C C-terminus
SHALO_RS13055	PF00206	Lyase
SHALO_RS13055	PF10415	Fumarase C C-terminus
SHALO_RS13060	PF03605	SHALO_RS13060
SHALO_RS13065	PF00710	Asparaginase
SHALO_RS13070	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SHALO_RS13070	PF04392	ABC transporter substrate binding protein
SHALO_RS13075	PF00072	Response regulator receiver domain
SHALO_RS13075	PF00486	Transcriptional regulatory protein, C terminal
SHALO_RS13080	PF01464	Transglycosylase SLT domain
SHALO_RS13085	PF00497	Bacterial extracellular solute-binding proteins, family 3
SHALO_RS13090	PF00528	Binding-protein-dependent transport system inner membrane component
SHALO_RS13100	PF02661	Fic/DOC family
SHALO_RS13100	PF08279	HTH domain
SHALO_RS13100	PF13784	Fic/DOC family N-terminal
SHALO_RS13115	PF00005	ABC transporter
SHALO_RS13120	PF02687	SHALO_RS13120
SHALO_RS13130	PF05573	NosL
SHALO_RS13135	PF08238	Sel1 repeat
SHALO_RS13140	PF01578	SHALO_RS13140
SHALO_RS13140	PF05140	SHALO_RS13140
SHALO_RS13145	PF03916	SHALO_RS13145
SHALO_RS13150	PF13247	4Fe-4S dicluster domain
SHALO_RS13155	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
SHALO_RS13155	PF01346	Domain amino terminal to FKBP-type peptidyl-prolyl isomerase
SHALO_RS13165	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SHALO_RS13165	PF11845	SHALO_RS13165
SHALO_RS13170	PF00072	Response regulator receiver domain
SHALO_RS13170	PF00486	Transcriptional regulatory protein, C terminal
SHALO_RS13175	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
SHALO_RS13175	PF00672	HAMP domain
SHALO_RS13185	PF01638	HxlR-like helix-turn-helix
SHALO_RS13190	PF02525	Flavodoxin-like fold
SHALO_RS13195	PF00817	impB/mucB/samB family
SHALO_RS13200	PF09335	SHALO_RS13200
SHALO_RS13210	PF00593	TonB dependent receptor
SHALO_RS13210	PF07715	TonB-dependent Receptor Plug Domain
SHALO_RS13215	PF03544	Gram-negative bacterial TonB protein C-terminal
SHALO_RS13220	PF02472	Biopolymer transport protein ExbD/TolR
SHALO_RS13225	PF01618	SHALO_RS13225
SHALO_RS13230	PF00586	AIR synthase related protein, N-terminal domain
SHALO_RS13230	PF02769	AIR synthase related protein, C-terminal domain
SHALO_RS13235	PF01206	Sulfurtransferase TusA
SHALO_RS13235	PF02635	DsrE/DsrF-like family
SHALO_RS13245	PF00497	Bacterial extracellular solute-binding proteins, family 3
SHALO_RS13255	PF00990	GGDEF domain
SHALO_RS13255	PF08447	PAS fold
SHALO_RS13255	PF13426	PAS domain
SHALO_RS13260	PF12802	MarR family
SHALO_RS13265	PF07690	Major Facilitator Superfamily
SHALO_RS13280	PF01594	SHALO_RS13280
SHALO_RS13285	PF00005	ABC transporter
SHALO_RS13290	PF00528	Binding-protein-dependent transport system inner membrane component
SHALO_RS13295	PF12849	PBP superfamily domain
SHALO_RS13300	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SHALO_RS13305	PF02634	FdhD/NarQ family
SHALO_RS13310	PF01292	Prokaryotic cytochrome b561
SHALO_RS13315	PF13247	4Fe-4S dicluster domain
SHALO_RS13320	PF00384	Molybdopterin oxidoreductase
SHALO_RS13320	PF01568	Molydopterin dinucleotide binding domain
SHALO_RS13325	PF00384	Molybdopterin oxidoreductase
SHALO_RS13325	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
SHALO_RS13335	PF02613	Nitrate reductase delta subunit
SHALO_RS13340	PF00593	TonB dependent receptor
SHALO_RS13340	PF07715	TonB-dependent Receptor Plug Domain
SHALO_RS13345	PF00005	ABC transporter
SHALO_RS13350	PF01032	FecCD transport family
SHALO_RS13355	PF01497	Periplasmic binding protein
SHALO_RS13360	PF00296	Luciferase-like monooxygenase
SHALO_RS13365	PF01152	Bacterial-like globin
SHALO_RS13370	PF03544	Gram-negative bacterial TonB protein C-terminal
SHALO_RS13375	PF02472	Biopolymer transport protein ExbD/TolR
SHALO_RS13380	PF01618	SHALO_RS13380
SHALO_RS13385	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SHALO_RS13385	PF03459	TOBE domain
SHALO_RS13390	PF01152	Bacterial-like globin
SHALO_RS13395	PF00593	TonB dependent receptor
SHALO_RS13395	PF07715	TonB-dependent Receptor Plug Domain
SHALO_RS13400	PF01497	Periplasmic binding protein
SHALO_RS13405	PF01497	Periplasmic binding protein
SHALO_RS13405	PF04055	Radical SAM superfamily
SHALO_RS13410	PF13649	Methyltransferase domain
SHALO_RS13415	PF03459	TOBE domain
SHALO_RS13420	PF02537	SHALO_RS13420
SHALO_RS13425	PF02641	Uncharacterized ACR, COG1993
SHALO_RS13430	PF02311	AraC-like ligand binding domain
SHALO_RS13430	PF12833	Helix-turn-helix domain
SHALO_RS13440	PF04264	YceI-like domain
SHALO_RS13445	PF02311	AraC-like ligand binding domain
SHALO_RS13445	PF12833	Helix-turn-helix domain
SHALO_RS13450	PF01292	Prokaryotic cytochrome b561
SHALO_RS13455	PF13247	4Fe-4S dicluster domain
SHALO_RS13460	PF00384	Molybdopterin oxidoreductase
SHALO_RS13460	PF01568	Molydopterin dinucleotide binding domain
SHALO_RS13465	PF00384	Molybdopterin oxidoreductase
SHALO_RS13465	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
SHALO_RS13480	PF02613	Nitrate reductase delta subunit
SHALO_RS13485	PF12838	4Fe-4S dicluster domain
SHALO_RS13485	PF13237	4Fe-4S dicluster domain
SHALO_RS13490	PF13458	Periplasmic binding protein
SHALO_RS13495	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SHALO_RS13500	PF00072	Response regulator receiver domain
SHALO_RS13500	PF05732	SHALO_RS13500
SHALO_RS13505	PF03841	L-seryl-tRNA selenium transferase
SHALO_RS13510	PF00009	Elongation factor Tu GTP binding domain
SHALO_RS13510	PF09107	Elongation factor SelB, winged helix
SHALO_RS13515	PF02754	SHALO_RS13515
SHALO_RS13520	PF13085	2Fe-2S iron-sulfur cluster binding domain
SHALO_RS13520	PF13183	4Fe-4S dicluster domain
SHALO_RS13525	PF00890	FAD binding domain
SHALO_RS13525	PF02910	Fumarate reductase flavoprotein C-term
SHALO_RS13535	PF01047	MarR family
SHALO_RS13540	PF04264	YceI-like domain
SHALO_RS13545	PF02678	Pirin
SHALO_RS13550	PF09360	Iron-binding zinc finger CDGSH type
SHALO_RS13555	PF03008	SHALO_RS13555
SHALO_RS13560	PF13328	HD domain
SHALO_RS13570	PF13098	Thioredoxin-like domain
SHALO_RS13575	PF08447	PAS fold
SHALO_RS13575	PF08448	PAS fold
SHALO_RS13580	PF00072	Response regulator receiver domain
SHALO_RS13580	PF00486	Transcriptional regulatory protein, C terminal
SHALO_RS13585	PF00672	HAMP domain
SHALO_RS13590	PF01965	DJ-1/PfpI family
SHALO_RS13595	PF00891	O-methyltransferase
SHALO_RS13605	PF00535	Glycosyl transferase family 2
SHALO_RS13610	PF03279	SHALO_RS13610
SHALO_RS13615	PF00221	Aromatic amino acid lyase
SHALO_RS13620	PF13561	Enoyl-(Acyl carrier protein) reductase
SHALO_RS13640	PF00501	AMP-binding enzyme
SHALO_RS13655	PF00561	alpha/beta hydrolase fold
SHALO_RS13665	PF13723	SHALO_RS13665
SHALO_RS13670	PF00109	Beta-ketoacyl synthase, N-terminal domain
SHALO_RS13670	PF02801	Beta-ketoacyl synthase, C-terminal domain
SHALO_RS13675	PF00550	Phosphopantetheine attachment site
SHALO_RS13680	PF00270	DEAD/DEAH box helicase
SHALO_RS13680	PF00271	Helicase conserved C-terminal domain
SHALO_RS13690	PF01810	SHALO_RS13690
SHALO_RS13695	PF01810	SHALO_RS13695
SHALO_RS13705	PF00403	Heavy-metal-associated domain
SHALO_RS13710	PF02411	SHALO_RS13710
SHALO_RS13715	PF01841	Transglutaminase-like superfamily
SHALO_RS13725	PF02086	D12 class N6 adenine-specific DNA methyltransferase
SHALO_RS13730	PF00072	Response regulator receiver domain
SHALO_RS13740	PF01425	Amidase
SHALO_RS13745	PF00289	Carbamoyl-phosphate synthase L chain, N-terminal domain
SHALO_RS13745	PF00364	Biotin-requiring enzyme
SHALO_RS13745	PF02626	Allophanate hydrolase subunit 2
SHALO_RS13745	PF02682	Allophanate hydrolase subunit 1
SHALO_RS13745	PF02785	Biotin carboxylase C-terminal domain
SHALO_RS13745	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
SHALO_RS13750	PF09347	Domain of unknown function (DUF1989)
SHALO_RS13755	PF09347	Domain of unknown function (DUF1989)
SHALO_RS13760	PF00005	ABC transporter
SHALO_RS13765	PF00528	Binding-protein-dependent transport system inner membrane component
SHALO_RS13770	PF09084	NMT1/THI5 like
SHALO_RS13775	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SHALO_RS13780	PF00072	Response regulator receiver domain
SHALO_RS13780	PF00486	Transcriptional regulatory protein, C terminal
SHALO_RS13785	PF13202	EF hand
SHALO_RS13785	PF13499	EF-hand domain pair
SHALO_RS13790	PF00593	TonB dependent receptor
SHALO_RS13790	PF07715	TonB-dependent Receptor Plug Domain
SHALO_RS13795	PF04773	FecR protein
SHALO_RS13795	PF16220	SHALO_RS13795
SHALO_RS13795	PF16344	SHALO_RS13795
SHALO_RS13800	PF04542	Sigma-70 region 2
SHALO_RS13800	PF08281	Sigma-70, region 4
SHALO_RS13805	PF00072	Response regulator receiver domain
SHALO_RS13805	PF00486	Transcriptional regulatory protein, C terminal
SHALO_RS13810	PF00512	His Kinase A (phospho-acceptor) domain
SHALO_RS13810	PF00582	Universal stress protein family
SHALO_RS13810	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SHALO_RS13810	PF02702	Osmosensitive K+ channel His kinase sensor domain
SHALO_RS13810	PF13493	Domain of unknown function (DUF4118)
SHALO_RS13815	PF02669	SHALO_RS13815
SHALO_RS13820	PF00122	E1-E2 ATPase
SHALO_RS13820	PF00702	haloacid dehalogenase-like hydrolase
SHALO_RS13825	PF03814	SHALO_RS13825
SHALO_RS13830	PF13561	Enoyl-(Acyl carrier protein) reductase
SHALO_RS13835	PF00278	Pyridoxal-dependent decarboxylase, C-terminal sheet domain
SHALO_RS13840	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
SHALO_RS13840	PF00672	HAMP domain
SHALO_RS13840	PF08269	Cache domain
SHALO_RS13845	PF00106	short chain dehydrogenase
SHALO_RS13855	PF03435	Saccharopine dehydrogenase
SHALO_RS13855	PF16653	SHALO_RS13855
SHALO_RS13860	PF01725	Ham1 family
SHALO_RS13865	PF03562	MltA specific insert domain
SHALO_RS13865	PF06725	3D domain
SHALO_RS13870	PF07690	Major Facilitator Superfamily
SHALO_RS13875	PF09335	SHALO_RS13875
SHALO_RS13885	PF03734	L,D-transpeptidase catalytic domain
SHALO_RS13890	PF14255	SHALO_RS13890
SHALO_RS13895	PF00994	Probable molybdopterin binding domain
SHALO_RS13895	PF03453	MoeA N-terminal region (domain I and II)
SHALO_RS13895	PF03454	MoeA C-terminal region (domain IV)
SHALO_RS13900	PF02391	MoaE protein
SHALO_RS13905	PF02597	ThiS family
SHALO_RS13910	PF01106	NifU-like domain
SHALO_RS13910	PF01592	NifU-like N terminal domain
SHALO_RS13910	PF04324	BFD-like [2Fe-2S] binding domain
SHALO_RS13915	PF00266	Aminotransferase class-V
SHALO_RS13920	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
SHALO_RS13925	PF01227	GTP cyclohydrolase I
SHALO_RS13930	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
SHALO_RS13930	PF05697	Bacterial trigger factor protein (TF)
SHALO_RS13930	PF05698	Bacterial trigger factor protein (TF) C-terminus
SHALO_RS13935	PF00574	Clp protease
SHALO_RS13940	PF00990	GGDEF domain
SHALO_RS13945	PF01327	Polypeptide deformylase
SHALO_RS13950	PF01078	Magnesium chelatase, subunit ChlI
SHALO_RS13950	PF13335	SHALO_RS13950
SHALO_RS13950	PF13541	Subunit ChlI of Mg-chelatase
SHALO_RS13955	PF01256	Carbohydrate kinase
SHALO_RS13955	PF03853	YjeF-related protein N-terminus
SHALO_RS13960	PF00551	Formyl transferase
SHALO_RS13965	PF05690	Thiazole biosynthesis protein ThiG
SHALO_RS13995	PF03573	outer membrane porin, OprD family
SHALO_RS14000	PF01527	Transposase
SHALO_RS14005	PF00037	4Fe-4S binding domain
SHALO_RS14005	PF12838	4Fe-4S dicluster domain
SHALO_RS14010	PF00037	4Fe-4S binding domain
SHALO_RS14010	PF12801	SHALO_RS14010
SHALO_RS14015	PF12838	4Fe-4S dicluster domain
SHALO_RS14020	PF02613	Nitrate reductase delta subunit
SHALO_RS14025	PF04976	SHALO_RS14025
SHALO_RS14030	PF12800	4Fe-4S binding domain
SHALO_RS14030	PF13247	4Fe-4S dicluster domain
SHALO_RS14035	PF00384	Molybdopterin oxidoreductase
SHALO_RS14035	PF01568	Molydopterin dinucleotide binding domain
SHALO_RS14035	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
SHALO_RS14045	PF01527	Transposase
SHALO_RS14045	PF13276	SHALO_RS14045
SHALO_RS14050	PF01527	Transposase
SHALO_RS14055	PF00072	Response regulator receiver domain
SHALO_RS14055	PF00486	Transcriptional regulatory protein, C terminal
SHALO_RS14060	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SHALO_RS14065	PF05014	Nucleoside 2-deoxyribosyltransferase
SHALO_RS14070	PF00171	Aldehyde dehydrogenase family
SHALO_RS14075	PF05610	SHALO_RS14075
SHALO_RS14085	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
SHALO_RS14085	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
SHALO_RS14095	PF09851	SHALO_RS14095
SHALO_RS14100	PF02583	Metal-sensitive transcriptional repressor
SHALO_RS14105	PF03824	SHALO_RS14105
SHALO_RS14110	PF00575	S1 RNA binding domain
SHALO_RS14110	PF09371	Tex-like protein N-terminal domain
SHALO_RS14110	PF12836	Helix-hairpin-helix motif
SHALO_RS14110	PF16921	SHALO_RS14110
SHALO_RS14125	PF00881	Nitroreductase family
SHALO_RS14130	PF03992	Antibiotic biosynthesis monooxygenase
SHALO_RS14135	PF00939	Sodium:sulfate symporter transmembrane region
SHALO_RS14140	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
SHALO_RS14140	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
SHALO_RS14145	PF01925	SHALO_RS14145
SHALO_RS14150	PF12698	ABC-2 family transporter protein
SHALO_RS14155	PF12698	ABC-2 family transporter protein
SHALO_RS14160	PF00005	ABC transporter
SHALO_RS14165	PF13437	HlyD family secretion protein
SHALO_RS14170	PF00440	Bacterial regulatory proteins, tetR family
SHALO_RS14170	PF09209	Domain of unknown function (DUF1956)
SHALO_RS14175	PF04607	Region found in RelA / SpoT proteins
SHALO_RS14180	PF00486	Transcriptional regulatory protein, C terminal
SHALO_RS14190	PF05538	SHALO_RS14190
SHALO_RS14195	PF03264	NapC/NirT cytochrome c family, N-terminal region
SHALO_RS14200	PF14537	Cytochrome c3
SHALO_RS14205	PF00890	FAD binding domain
SHALO_RS14210	PF03942	SHALO_RS14210
SHALO_RS14215	PF01810	SHALO_RS14215
SHALO_RS14220	PF00881	Nitroreductase family
SHALO_RS14225	PF03733	SHALO_RS14225
SHALO_RS14230	PF13673	Acetyltransferase (GNAT) domain
SHALO_RS14235	PF03358	NADPH-dependent FMN reductase
SHALO_RS14245	PF00873	AcrB/AcrD/AcrF family
SHALO_RS14250	PF16576	SHALO_RS14250
SHALO_RS14255	PF02321	Outer membrane efflux protein
SHALO_RS14260	PF13115	SHALO_RS14260
SHALO_RS14270	PF07731	Multicopper oxidase
SHALO_RS14275	PF00072	Response regulator receiver domain
SHALO_RS14275	PF00486	Transcriptional regulatory protein, C terminal
SHALO_RS14280	PF00512	His Kinase A (phospho-acceptor) domain
SHALO_RS14280	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SHALO_RS14285	PF00005	ABC transporter
SHALO_RS14290	PF00528	Binding-protein-dependent transport system inner membrane component
SHALO_RS14295	PF13343	Bacterial extracellular solute-binding protein
SHALO_RS14300	PF00080	Copper/zinc superoxide dismutase (SODC)
SHALO_RS14305	PF09834	SHALO_RS14305
SHALO_RS14310	PF01507	Phosphoadenosine phosphosulfate reductase family
SHALO_RS14315	PF01507	Phosphoadenosine phosphosulfate reductase family
SHALO_RS14320	PF00009	Elongation factor Tu GTP binding domain
SHALO_RS14325	PF02597	ThiS family
SHALO_RS14330	PF00899	ThiF family
SHALO_RS14335	PF14464	Prokaryotic homologs of the JAB domain
SHALO_RS14340	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
SHALO_RS14340	PF01206	Sulfurtransferase TusA
SHALO_RS14340	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
SHALO_RS14345	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
SHALO_RS14345	PF13241	Putative NAD(P)-binding
SHALO_RS14345	PF14824	Sirohaem biosynthesis protein central
SHALO_RS14350	PF01053	Cys/Met metabolism PLP-dependent enzyme
SHALO_RS14360	PF03054	tRNA methyl transferase
SHALO_RS14370	PF09459	Ethylbenzene dehydrogenase
SHALO_RS14375	PF00072	Response regulator receiver domain
SHALO_RS14375	PF00486	Transcriptional regulatory protein, C terminal
SHALO_RS14380	PF00512	His Kinase A (phospho-acceptor) domain
SHALO_RS14380	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SHALO_RS14385	PF09719	Putative redox-active protein (C_GCAxxG_C_C)
SHALO_RS14390	PF00990	GGDEF domain
SHALO_RS14395	PF13192	Thioredoxin domain
SHALO_RS14400	PF00581	Rhodanese-like domain
SHALO_RS14405	PF03773	SHALO_RS14405
SHALO_RS14410	PF00085	Thioredoxin
SHALO_RS14415	PF02683	SHALO_RS14415
SHALO_RS14420	PF01451	Low molecular weight phosphotyrosine protein phosphatase
SHALO_RS14425	PF02040	SHALO_RS14425
SHALO_RS14430	PF01451	Low molecular weight phosphotyrosine protein phosphatase
SHALO_RS14435	PF00355	Rieske [2Fe-2S] domain
SHALO_RS14440	PF00384	Molybdopterin oxidoreductase
SHALO_RS14440	PF01568	Molydopterin dinucleotide binding domain
SHALO_RS14450	PF17131	SHALO_RS14450
SHALO_RS14455	PF02687	SHALO_RS14455
SHALO_RS14455	PF12704	MacB-like periplasmic core domain
SHALO_RS14460	PF00005	ABC transporter
SHALO_RS14465	PF00072	Response regulator receiver domain
SHALO_RS14465	PF00158	Sigma-54 interaction domain
SHALO_RS14470	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SHALO_RS14475	PF12974	ABC transporter, phosphonate, periplasmic substrate-binding protein
SHALO_RS14480	PF03916	SHALO_RS14480
SHALO_RS14485	PF00384	Molybdopterin oxidoreductase
SHALO_RS14485	PF01568	Molydopterin dinucleotide binding domain
SHALO_RS14485	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
SHALO_RS14490	PF13247	4Fe-4S dicluster domain
SHALO_RS14495	PF12849	PBP superfamily domain
SHALO_RS14500	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
SHALO_RS14505	PF06723	MreB/Mbl protein
SHALO_RS14510	PF03741	SHALO_RS14510
SHALO_RS14515	PF02621	Menaquinone biosynthesis
SHALO_RS14520	PF00208	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
SHALO_RS14520	PF02812	Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
SHALO_RS14525	PF14681	Uracil phosphoribosyltransferase
SHALO_RS14530	PF00390	Malic enzyme, N-terminal domain
SHALO_RS14530	PF03949	Malic enzyme, NAD binding domain
SHALO_RS14535	PF00749	tRNA synthetases class I (E and Q), catalytic domain
SHALO_RS14545	PF00289	Carbamoyl-phosphate synthase L chain, N-terminal domain
SHALO_RS14545	PF02785	Biotin carboxylase C-terminal domain
SHALO_RS14545	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
SHALO_RS14550	PF00364	Biotin-requiring enzyme
SHALO_RS14555	PF00692	dUTPase
SHALO_RS14560	PF00583	Acetyltransferase (GNAT) family
SHALO_RS14570	PF10672	S-adenosylmethionine-dependent methyltransferase
SHALO_RS14575	PF00561	alpha/beta hydrolase fold
SHALO_RS14580	PF13649	Methyltransferase domain
SHALO_RS14585	PF00669	Bacterial flagellin N-terminal helical region
SHALO_RS14590	PF02719	Polysaccharide biosynthesis protein
SHALO_RS14595	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
SHALO_RS14600	PF02348	Cytidylyltransferase
SHALO_RS14610	PF13302	Acetyltransferase (GNAT) domain
SHALO_RS14615	PF03102	NeuB family
SHALO_RS14615	PF08666	SAF domain
SHALO_RS14620	PF01370	NAD dependent epimerase/dehydratase family
SHALO_RS14625	PF04007	SHALO_RS14625
SHALO_RS14630	PF13578	Methyltransferase domain
SHALO_RS14635	PF00733	Asparagine synthase
SHALO_RS14635	PF13537	Glutamine amidotransferase domain
SHALO_RS14640	PF00534	Glycosyl transferases group 1
SHALO_RS14645	PF08241	Methyltransferase domain
SHALO_RS14650	PF05050	Methyltransferase FkbM domain
SHALO_RS14655	PF08241	Methyltransferase domain
SHALO_RS14660	PF16363	SHALO_RS14660
SHALO_RS14665	PF04055	Radical SAM superfamily
SHALO_RS14665	PF13186	Iron-sulfur cluster-binding domain
SHALO_RS14665	PF13394	4Fe-4S single cluster domain
SHALO_RS14670	PF04055	Radical SAM superfamily
SHALO_RS14670	PF13186	Iron-sulfur cluster-binding domain
SHALO_RS14675	PF00733	Asparagine synthase
SHALO_RS14675	PF13537	Glutamine amidotransferase domain
SHALO_RS14680	PF13522	Glutamine amidotransferase domain
SHALO_RS14700	PF01973	SHALO_RS14700
SHALO_RS14705	PF00669	Bacterial flagellin N-terminal helical region
SHALO_RS14705	PF00700	Bacterial flagellin C-terminal helical region
SHALO_RS14705	PF07196	Flagellin hook IN motif
SHALO_RS14710	PF01131	DNA topoisomerase
SHALO_RS14710	PF01396	SHALO_RS14710
SHALO_RS14710	PF01751	Toprim domain
SHALO_RS14715	PF04055	Radical SAM superfamily
SHALO_RS14715	PF06968	Biotin and Thiamin Synthesis associated domain
SHALO_RS14720	PF00285	Citrate synthase
SHALO_RS14725	PF11741	AMIN domain
SHALO_RS14735	PF00113	Enolase, C-terminal TIM barrel domain
SHALO_RS14735	PF03952	Enolase, N-terminal domain
SHALO_RS14740	PF00154	recA bacterial DNA recombination protein
SHALO_RS14745	PF02621	Menaquinone biosynthesis
SHALO_RS14750	PF01313	SHALO_RS14750
SHALO_RS14755	PF02873	UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain
SHALO_RS14760	PF00814	Glycoprotease family
SHALO_RS14765	PF02557	D-alanyl-D-alanine carboxypeptidase
SHALO_RS14770	PF00563	EAL domain
SHALO_RS14770	PF00990	GGDEF domain
SHALO_RS14770	PF08269	Cache domain
SHALO_RS14770	PF13426	PAS domain
SHALO_RS14780	PF13649	Methyltransferase domain
SHALO_RS14790	PF00149	Calcineurin-like phosphoesterase
SHALO_RS14795	PF01235	SHALO_RS14795
SHALO_RS14800	PF00860	Permease family
SHALO_RS14805	PF02670	1-deoxy-D-xylulose 5-phosphate reductoisomerase
SHALO_RS14805	PF08436	1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal
SHALO_RS14805	PF13288	DXP reductoisomerase C-terminal domain
SHALO_RS14810	PF01148	Cytidylyltransferase family
SHALO_RS14820	PF05670	SHALO_RS14820
SHALO_RS14820	PF05833	Fibronectin-binding protein A N-terminus (FbpA)
SHALO_RS14825	PF02595	Glycerate kinase family
SHALO_RS14830	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
SHALO_RS14830	PF02870	6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
SHALO_RS14835	PF00583	Acetyltransferase (GNAT) family
SHALO_RS14840	PF06094	AIG2-like family
SHALO_RS14845	PF12796	Ankyrin repeats (3 copies)
SHALO_RS14850	PF00199	Catalase
SHALO_RS14850	PF06628	Catalase-related immune-responsive
SHALO_RS14855	PF13545	Crp-like helix-turn-helix domain
SHALO_RS14860	PF11127	Protein of unknown function (DUF2892)
SHALO_RS14865	PF00330	Aconitase family (aconitate hydratase)
SHALO_RS14870	PF12804	MobA-like NTP transferase domain
SHALO_RS14875	PF00563	EAL domain
SHALO_RS14875	PF00990	GGDEF domain
SHALO_RS14880	PF05573	NosL
SHALO_RS14885	PF07876	Stress responsive A/B Barrel Domain
SHALO_RS14890	PF00892	EamA-like transporter family
SHALO_RS14895	PF02253	Phospholipase A1
SHALO_RS14900	PF00076	RNA recognition motif
SHALO_RS14905	PF01967	MoaC family
SHALO_RS14910	PF04359	Protein of unknown function (DUF493)
SHALO_RS14920	PF14358	SHALO_RS14920
SHALO_RS14925	PF07467	Beta-lactamase inhibitor (BLIP)
SHALO_RS14930	PF00037	4Fe-4S binding domain
SHALO_RS14930	PF13187	4Fe-4S dicluster domain
SHALO_RS14935	PF02613	Nitrate reductase delta subunit
SHALO_RS14945	PF00034	Cytochrome c
SHALO_RS14945	PF09459	Ethylbenzene dehydrogenase
SHALO_RS14950	PF13247	4Fe-4S dicluster domain
SHALO_RS14955	PF00384	Molybdopterin oxidoreductase
SHALO_RS14955	PF01568	Molydopterin dinucleotide binding domain
SHALO_RS14960	PF00581	Rhodanese-like domain
SHALO_RS14970	PF10609	ParA/MinD ATPase like
SHALO_RS14975	PF11853	SHALO_RS14975
SHALO_RS15015	PF01027	Inhibitor of apoptosis-promoting Bax1
SHALO_RS15020	PF00581	Rhodanese-like domain
SHALO_RS15025	PF03916	SHALO_RS15025
SHALO_RS15030	PF13247	4Fe-4S dicluster domain
SHALO_RS15035	PF00384	Molybdopterin oxidoreductase
SHALO_RS15035	PF01568	Molydopterin dinucleotide binding domain
SHALO_RS15035	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
SHALO_RS15045	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SHALO_RS15045	PF03466	LysR substrate binding domain
SHALO_RS15055	PF00581	Rhodanese-like domain
SHALO_RS15060	PF03916	SHALO_RS15060
SHALO_RS15065	PF13247	4Fe-4S dicluster domain
SHALO_RS15070	PF00384	Molybdopterin oxidoreductase
SHALO_RS15070	PF01568	Molydopterin dinucleotide binding domain
SHALO_RS15070	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
SHALO_RS15075	PF13489	Methyltransferase domain
SHALO_RS15080	PF00211	Adenylate and Guanylate cyclase catalytic domain
SHALO_RS15080	PF05226	SHALO_RS15080
SHALO_RS15085	PF01590	GAF domain
SHALO_RS15085	PF01966	HD domain
SHALO_RS15085	PF12706	Beta-lactamase superfamily domain
SHALO_RS15085	PF13487	HD domain
SHALO_RS15090	PF03840	Preprotein translocase SecG subunit
SHALO_RS15095	PF01522	Polysaccharide deacetylase
SHALO_RS15100	PF01765	Ribosome recycling factor
SHALO_RS15105	PF00156	Phosphoribosyl transferase domain
SHALO_RS15110	PF06271	SHALO_RS15110
SHALO_RS15115	PF12832	MFS_1 like family
SHALO_RS15120	PF03748	SHALO_RS15120
SHALO_RS15125	PF11335	SHALO_RS15125
SHALO_RS15130	PF04011	LemA family
SHALO_RS15135	PF00009	Elongation factor Tu GTP binding domain
SHALO_RS15135	PF00679	Elongation factor G C-terminus
SHALO_RS15135	PF03144	Elongation factor Tu domain 2
SHALO_RS15140	PF02120	Flagellar hook-length control protein FliK
SHALO_RS15145	PF03963	SHALO_RS15145
SHALO_RS15145	PF13860	FlgD Ig-like domain
SHALO_RS15150	PF00460	Flagella basal body rod protein
SHALO_RS15150	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
SHALO_RS15155	PF00460	Flagella basal body rod protein
SHALO_RS15155	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
SHALO_RS15155	PF07196	Flagellin hook IN motif
SHALO_RS15155	PF07559	Flagellar basal body protein FlaE
SHALO_RS15160	PF13711	SHALO_RS15160
SHALO_RS15165	PF10387	Protein of unknown function (DUF2442)
SHALO_RS15170	PF02511	Thymidylate synthase complementing protein
SHALO_RS15175	PF02075	Crossover junction endodeoxyribonuclease RuvC