SHALO_RS12245 2edac11d6014553330f3811d81510f24 416 SMART SM00331 38 247 9.6E-8 T 11-11-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 SHALO_RS12245 2edac11d6014553330f3811d81510f24 416 Pfam PF13581 Histidine kinase-like ATPase domain 259 408 1.3E-12 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS12245 2edac11d6014553330f3811d81510f24 416 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 62 245 2.8E-20 T 11-11-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 SHALO_RS05805 ee32181d5dd6a64306cbfbd1b84cb796 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 99 114 5.1E-21 T 11-11-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SHALO_RS05805 ee32181d5dd6a64306cbfbd1b84cb796 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 127 142 5.1E-21 T 11-11-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SHALO_RS05805 ee32181d5dd6a64306cbfbd1b84cb796 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 59 71 5.1E-21 T 11-11-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SHALO_RS05805 ee32181d5dd6a64306cbfbd1b84cb796 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 114 126 5.1E-21 T 11-11-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SHALO_RS05805 ee32181d5dd6a64306cbfbd1b84cb796 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 33 48 5.1E-21 T 11-11-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SHALO_RS05805 ee32181d5dd6a64306cbfbd1b84cb796 164 PIRSF PIRSF001467 3 163 5.8E-38 T 11-11-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 SHALO_RS05805 ee32181d5dd6a64306cbfbd1b84cb796 164 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 21 152 5.4E-40 T 11-11-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SHALO_RS05805 ee32181d5dd6a64306cbfbd1b84cb796 164 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 54 71 - T 11-11-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 SHALO_RS05805 ee32181d5dd6a64306cbfbd1b84cb796 164 Gene3D G3DSA:2.40.100.10 10 152 3.6E-48 T 11-11-2016 IPR029000 Cyclophilin-like domain SHALO_RS05805 ee32181d5dd6a64306cbfbd1b84cb796 164 SUPERFAMILY SSF50891 19 153 2.92E-46 T 11-11-2016 IPR029000 Cyclophilin-like domain SHALO_RS03065 973caec08a6f7622ba28c6a683cd0a01 413 SMART SM00490 259 340 1.1E-32 T 11-11-2016 IPR001650 Helicase, C-terminal SHALO_RS03065 973caec08a6f7622ba28c6a683cd0a01 413 SMART SM00487 20 223 4.0E-55 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SHALO_RS03065 973caec08a6f7622ba28c6a683cd0a01 413 Pfam PF00271 Helicase conserved C-terminal domain 236 340 8.2E-27 T 11-11-2016 IPR001650 Helicase, C-terminal SHALO_RS03065 973caec08a6f7622ba28c6a683cd0a01 413 Pfam PF00270 DEAD/DEAH box helicase 25 195 3.1E-47 T 11-11-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SHALO_RS03065 973caec08a6f7622ba28c6a683cd0a01 413 SUPERFAMILY SSF52540 74 360 1.6E-67 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS03065 973caec08a6f7622ba28c6a683cd0a01 413 Gene3D G3DSA:3.40.50.300 220 381 1.6E-50 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS03065 973caec08a6f7622ba28c6a683cd0a01 413 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 11-11-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site SHALO_RS03065 973caec08a6f7622ba28c6a683cd0a01 413 Gene3D G3DSA:3.40.50.300 2 219 1.0E-71 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS01355 e9dff097aeb2583f5f02c9ba81e05892 198 Gene3D G3DSA:3.30.1020.10 160 193 2.4E-12 T 11-11-2016 SHALO_RS01355 e9dff097aeb2583f5f02c9ba81e05892 198 Pfam PF00578 AhpC/TSA family 4 137 6.2E-33 T 11-11-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 SHALO_RS01355 e9dff097aeb2583f5f02c9ba81e05892 198 SUPERFAMILY SSF52833 2 195 2.91E-64 T 11-11-2016 IPR012336 Thioredoxin-like fold SHALO_RS01355 e9dff097aeb2583f5f02c9ba81e05892 198 Gene3D G3DSA:3.40.30.10 3 159 3.9E-60 T 11-11-2016 IPR012336 Thioredoxin-like fold SHALO_RS01355 e9dff097aeb2583f5f02c9ba81e05892 198 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 161 191 1.2E-9 T 11-11-2016 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 SHALO_RS01355 e9dff097aeb2583f5f02c9ba81e05892 198 PIRSF PIRSF000239 1 197 1.0E-57 T 11-11-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 SHALO_RS09250 97114f91d94ce26d7e12b4a13a07c253 339 SUPERFAMILY SSF55874 165 327 7.33E-32 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS09250 97114f91d94ce26d7e12b4a13a07c253 339 Gene3D G3DSA:1.20.120.620 8 105 1.6E-20 T 11-11-2016 SHALO_RS09250 97114f91d94ce26d7e12b4a13a07c253 339 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 220 327 3.2E-14 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS09250 97114f91d94ce26d7e12b4a13a07c253 339 PRINTS PR00344 Bacterial sensor protein C-terminal signature 290 308 2.8E-7 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS09250 97114f91d94ce26d7e12b4a13a07c253 339 PRINTS PR00344 Bacterial sensor protein C-terminal signature 313 326 2.8E-7 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS09250 97114f91d94ce26d7e12b4a13a07c253 339 PRINTS PR00344 Bacterial sensor protein C-terminal signature 275 285 2.8E-7 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS09250 97114f91d94ce26d7e12b4a13a07c253 339 SUPERFAMILY SSF47384 95 175 1.2E-16 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS09250 97114f91d94ce26d7e12b4a13a07c253 339 Gene3D G3DSA:1.10.287.130 106 161 4.2E-15 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS09250 97114f91d94ce26d7e12b4a13a07c253 339 SMART SM00388 109 176 2.6E-14 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS09250 97114f91d94ce26d7e12b4a13a07c253 339 Pfam PF13493 Domain of unknown function (DUF4118) 9 107 4.6E-19 T 11-11-2016 IPR025201 Sensor protein KdpD, transmembrane domain SHALO_RS09250 97114f91d94ce26d7e12b4a13a07c253 339 Gene3D G3DSA:3.30.565.10 162 329 5.4E-34 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS09250 97114f91d94ce26d7e12b4a13a07c253 339 SMART SM00387 220 329 7.6E-23 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS09250 97114f91d94ce26d7e12b4a13a07c253 339 Pfam PF00512 His Kinase A (phospho-acceptor) domain 113 173 3.9E-14 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS06040 52bd235a3fc6092dff3a3ad3a7d97c76 593 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 174 332 3.5E-14 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS06040 52bd235a3fc6092dff3a3ad3a7d97c76 593 Pfam PF00072 Response regulator receiver domain 18 142 4.1E-20 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS06040 52bd235a3fc6092dff3a3ad3a7d97c76 593 SUPERFAMILY SSF52172 15 176 3.7E-29 T 11-11-2016 IPR011006 CheY-like superfamily SHALO_RS06040 52bd235a3fc6092dff3a3ad3a7d97c76 593 SMART SM00052 344 590 6.4E-38 T 11-11-2016 IPR001633 EAL domain SHALO_RS06040 52bd235a3fc6092dff3a3ad3a7d97c76 593 Pfam PF00990 Diguanylate cyclase, GGDEF domain 179 327 5.6E-18 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS06040 52bd235a3fc6092dff3a3ad3a7d97c76 593 SMART SM00448 16 143 2.2E-22 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS06040 52bd235a3fc6092dff3a3ad3a7d97c76 593 Pfam PF00563 EAL domain 353 585 2.9E-50 T 11-11-2016 IPR001633 EAL domain SHALO_RS06040 52bd235a3fc6092dff3a3ad3a7d97c76 593 SUPERFAMILY SSF55073 183 333 6.36E-20 T 11-11-2016 IPR029787 Nucleotide cyclase SHALO_RS06040 52bd235a3fc6092dff3a3ad3a7d97c76 593 SMART SM00267 167 333 1.5E-12 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS06040 52bd235a3fc6092dff3a3ad3a7d97c76 593 SUPERFAMILY SSF141868 352 586 1.57E-55 T 11-11-2016 IPR001633 EAL domain SHALO_RS06040 52bd235a3fc6092dff3a3ad3a7d97c76 593 Gene3D G3DSA:3.30.70.270 180 337 1.9E-19 T 11-11-2016 SHALO_RS06040 52bd235a3fc6092dff3a3ad3a7d97c76 593 Gene3D G3DSA:3.40.50.2300 14 158 6.3E-28 T 11-11-2016 SHALO_RS06040 52bd235a3fc6092dff3a3ad3a7d97c76 593 Gene3D G3DSA:3.20.20.450 349 585 1.5E-53 T 11-11-2016 IPR001633 EAL domain SHALO_RS00680 fa9352fe0016773333cd2bf94b144694 392 SUPERFAMILY SSF52440 179 288 6.91E-16 T 11-11-2016 IPR016185 Pre-ATP-grasp domain SHALO_RS00680 fa9352fe0016773333cd2bf94b144694 392 SUPERFAMILY SSF56059 12 163 1.45E-59 T 11-11-2016 SHALO_RS00680 fa9352fe0016773333cd2bf94b144694 392 SUPERFAMILY SSF56059 275 389 1.45E-59 T 11-11-2016 SHALO_RS00680 fa9352fe0016773333cd2bf94b144694 392 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 12 390 5.3E-121 T 11-11-2016 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain SHALO_RS00920 2ebc39b13f99af2a275b4a483b127099 577 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 359 491 2.4E-28 T 11-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SHALO_RS00920 2ebc39b13f99af2a275b4a483b127099 577 SMART SM00382 355 494 1.1E-13 T 11-11-2016 IPR003593 AAA+ ATPase domain SHALO_RS00920 2ebc39b13f99af2a275b4a483b127099 577 Gene3D G3DSA:3.40.50.300 309 523 2.3E-41 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS00920 2ebc39b13f99af2a275b4a483b127099 577 SUPERFAMILY SSF52540 311 564 7.13E-39 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS01840 bc93611d18a581d54b585d2d9c6013c8 289 SUPERFAMILY SSF46626 30 157 3.49E-19 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS01840 bc93611d18a581d54b585d2d9c6013c8 289 Gene3D G3DSA:1.10.760.10 173 252 2.3E-13 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS01840 bc93611d18a581d54b585d2d9c6013c8 289 SUPERFAMILY SSF46626 165 272 5.67E-21 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS01840 bc93611d18a581d54b585d2d9c6013c8 289 Gene3D G3DSA:1.20.5.100 257 289 1.3E-7 T 11-11-2016 SHALO_RS01840 bc93611d18a581d54b585d2d9c6013c8 289 Gene3D G3DSA:1.10.760.10 6 172 1.5E-14 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS01840 bc93611d18a581d54b585d2d9c6013c8 289 Pfam PF00034 Cytochrome c 52 156 5.0E-14 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS02760 a3e7bbe03adfeeb515edf828204a3d98 239 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 11 230 2.9E-50 T 11-11-2016 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_RS02760 a3e7bbe03adfeeb515edf828204a3d98 239 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 6 111 3.5E-29 T 11-11-2016 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_RS02760 a3e7bbe03adfeeb515edf828204a3d98 239 SUPERFAMILY SSF54292 2 106 3.28E-25 T 11-11-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 SHALO_RS02760 a3e7bbe03adfeeb515edf828204a3d98 239 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 57 65 - T 11-11-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 SHALO_RS02760 a3e7bbe03adfeeb515edf828204a3d98 239 Gene3D G3DSA:3.10.20.30 3 106 1.8E-31 T 11-11-2016 IPR012675 Beta-grasp domain SHALO_RS02760 a3e7bbe03adfeeb515edf828204a3d98 239 Pfam PF13183 4Fe-4S dicluster domain 147 221 5.5E-9 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_RS02760 a3e7bbe03adfeeb515edf828204a3d98 239 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 151 162 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_RS02760 a3e7bbe03adfeeb515edf828204a3d98 239 Gene3D G3DSA:1.10.1060.10 111 237 2.8E-28 T 11-11-2016 SHALO_RS02760 a3e7bbe03adfeeb515edf828204a3d98 239 SUPERFAMILY SSF46548 109 236 3.49E-25 T 11-11-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 SHALO_RS02605 07923e9250b81e9fd104e0fd089a3006 172 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 39 147 3.1E-23 T 11-11-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS02605 07923e9250b81e9fd104e0fd089a3006 172 SUPERFAMILY SSF56770 12 154 5.49E-62 T 11-11-2016 SHALO_RS02605 07923e9250b81e9fd104e0fd089a3006 172 Gene3D G3DSA:3.40.50.700 24 157 2.0E-32 T 11-11-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS02605 07923e9250b81e9fd104e0fd089a3006 172 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 3 153 41.111 T 11-11-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS02605 07923e9250b81e9fd104e0fd089a3006 172 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 13 150 2.0E-65 T 11-11-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS00205 9c532d425f984ce8d0b8fd080aa92eae 281 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 64 105 - T 11-11-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 SHALO_RS00205 9c532d425f984ce8d0b8fd080aa92eae 281 SUPERFAMILY SSF46689 64 109 1.12E-8 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 SHALO_RS00205 9c532d425f984ce8d0b8fd080aa92eae 281 Pfam PF12833 Helix-turn-helix domain 33 109 1.1E-18 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SHALO_RS00205 9c532d425f984ce8d0b8fd080aa92eae 281 Gene3D G3DSA:3.20.80.10 123 280 2.9E-34 T 11-11-2016 IPR011256 Regulatory factor, effector binding domain SHALO_RS00205 9c532d425f984ce8d0b8fd080aa92eae 281 SMART SM00342 27 109 2.3E-24 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SHALO_RS00205 9c532d425f984ce8d0b8fd080aa92eae 281 Pfam PF06445 GyrI-like small molecule binding domain 122 280 1.1E-29 T 11-11-2016 IPR029442 GyrI-like small molecule binding domain SHALO_RS00205 9c532d425f984ce8d0b8fd080aa92eae 281 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 93 109 1.2E-6 T 11-11-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SHALO_RS00205 9c532d425f984ce8d0b8fd080aa92eae 281 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 78 93 1.2E-6 T 11-11-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SHALO_RS00205 9c532d425f984ce8d0b8fd080aa92eae 281 SUPERFAMILY SSF46689 11 60 2.63E-9 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 SHALO_RS00205 9c532d425f984ce8d0b8fd080aa92eae 281 Gene3D G3DSA:1.10.10.60 7 63 4.6E-18 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 SHALO_RS00205 9c532d425f984ce8d0b8fd080aa92eae 281 SMART SM00871 121 281 1.3E-29 T 11-11-2016 IPR010499 Bacterial transcription activator, effector binding SHALO_RS00205 9c532d425f984ce8d0b8fd080aa92eae 281 SUPERFAMILY SSF55136 122 280 1.43E-27 T 11-11-2016 IPR011256 Regulatory factor, effector binding domain SHALO_RS00205 9c532d425f984ce8d0b8fd080aa92eae 281 Gene3D G3DSA:1.10.10.60 64 108 3.3E-14 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 SHALO_RS03385 c9c7468d7aca1e89baa61c7938425412 368 Gene3D G3DSA:2.70.210.12 1 155 1.4E-55 T 11-11-2016 IPR006169 GTP1/OBG domain GO:0005525 SHALO_RS03385 c9c7468d7aca1e89baa61c7938425412 368 Pfam PF01926 50S ribosome-binding GTPase 160 279 5.9E-23 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 SHALO_RS03385 c9c7468d7aca1e89baa61c7938425412 368 Gene3D G3DSA:3.40.50.300 333 366 1.1E-44 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS03385 c9c7468d7aca1e89baa61c7938425412 368 Gene3D G3DSA:3.40.50.300 159 286 1.1E-44 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS03385 c9c7468d7aca1e89baa61c7938425412 368 SUPERFAMILY SSF82051 1 157 4.05E-52 T 11-11-2016 IPR006169 GTP1/OBG domain GO:0005525 SHALO_RS03385 c9c7468d7aca1e89baa61c7938425412 368 SUPERFAMILY SSF52540 150 307 3.88E-39 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS03385 c9c7468d7aca1e89baa61c7938425412 368 PIRSF PIRSF002401 1 332 6.8E-124 T 11-11-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 SHALO_RS03385 c9c7468d7aca1e89baa61c7938425412 368 Hamap MF_01454 GTPase Obg [obg]. 1 359 44.219 T 11-11-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 SHALO_RS03385 c9c7468d7aca1e89baa61c7938425412 368 Pfam PF01018 GTP1/OBG 2 157 5.0E-57 T 11-11-2016 IPR006169 GTP1/OBG domain GO:0005525 SHALO_RS03385 c9c7468d7aca1e89baa61c7938425412 368 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 2 319 1.5E-124 T 11-11-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 SHALO_RS03385 c9c7468d7aca1e89baa61c7938425412 368 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 210 225 2.0E-33 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 SHALO_RS03385 c9c7468d7aca1e89baa61c7938425412 368 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 161 181 2.0E-33 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 SHALO_RS03385 c9c7468d7aca1e89baa61c7938425412 368 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 227 245 2.0E-33 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 SHALO_RS03385 c9c7468d7aca1e89baa61c7938425412 368 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 182 200 2.0E-33 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 SHALO_RS11600 c1a1f5d7ebd4aa1d747b992ec2920996 386 SUPERFAMILY SSF56059 112 311 4.07E-57 T 11-11-2016 SHALO_RS11600 c1a1f5d7ebd4aa1d747b992ec2920996 386 Gene3D G3DSA:3.30.1490.20 122 196 6.4E-22 T 11-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SHALO_RS11600 c1a1f5d7ebd4aa1d747b992ec2920996 386 Gene3D G3DSA:3.40.50.20 4 119 2.8E-33 T 11-11-2016 IPR016185 Pre-ATP-grasp domain SHALO_RS11600 c1a1f5d7ebd4aa1d747b992ec2920996 386 Gene3D G3DSA:3.30.470.20 197 381 7.1E-63 T 11-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SHALO_RS11600 c1a1f5d7ebd4aa1d747b992ec2920996 386 SUPERFAMILY SSF51246 332 382 8.63E-7 T 11-11-2016 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780|Reactome: R-HSA-3371599 SHALO_RS11600 c1a1f5d7ebd4aa1d747b992ec2920996 386 Pfam PF02222 ATP-grasp domain 122 292 2.3E-56 T 11-11-2016 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type SHALO_RS11600 c1a1f5d7ebd4aa1d747b992ec2920996 386 SUPERFAMILY SSF52440 3 111 1.87E-28 T 11-11-2016 IPR016185 Pre-ATP-grasp domain SHALO_RS11600 c1a1f5d7ebd4aa1d747b992ec2920996 386 Hamap MF_01643 Phosphoribosylglycinamide formyltransferase 2 [purT]. 7 386 46.041 T 11-11-2016 IPR005862 Phosphoribosylglycinamide formyltransferase 2 GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 SHALO_RS09750 69af0cd655da308460671dde02a36c6c 375 PIRSF PIRSF001369 2 375 1.4E-117 T 11-11-2016 IPR024176 Citrate synthase, bacterial-type SHALO_RS09750 69af0cd655da308460671dde02a36c6c 375 Gene3D G3DSA:1.10.230.10 237 322 1.4E-29 T 11-11-2016 IPR016143 Citrate synthase-like, small alpha subdomain Reactome: R-HSA-163765|Reactome: R-HSA-75105 SHALO_RS09750 69af0cd655da308460671dde02a36c6c 375 Pfam PF00285 Citrate synthase, C-terminal domain 11 357 3.0E-110 T 11-11-2016 IPR002020 Citrate synthase GO:0046912 SHALO_RS09750 69af0cd655da308460671dde02a36c6c 375 Gene3D G3DSA:1.10.580.10 17 236 1.4E-71 T 11-11-2016 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 SHALO_RS09750 69af0cd655da308460671dde02a36c6c 375 PRINTS PR00143 Citrate synthase signature 328 342 3.0E-39 T 11-11-2016 IPR002020 Citrate synthase GO:0046912 SHALO_RS09750 69af0cd655da308460671dde02a36c6c 375 PRINTS PR00143 Citrate synthase signature 198 226 3.0E-39 T 11-11-2016 IPR002020 Citrate synthase GO:0046912 SHALO_RS09750 69af0cd655da308460671dde02a36c6c 375 PRINTS PR00143 Citrate synthase signature 126 139 3.0E-39 T 11-11-2016 IPR002020 Citrate synthase GO:0046912 SHALO_RS09750 69af0cd655da308460671dde02a36c6c 375 PRINTS PR00143 Citrate synthase signature 308 324 3.0E-39 T 11-11-2016 IPR002020 Citrate synthase GO:0046912 SHALO_RS09750 69af0cd655da308460671dde02a36c6c 375 PRINTS PR00143 Citrate synthase signature 176 191 3.0E-39 T 11-11-2016 IPR002020 Citrate synthase GO:0046912 SHALO_RS09750 69af0cd655da308460671dde02a36c6c 375 PRINTS PR00143 Citrate synthase signature 251 271 3.0E-39 T 11-11-2016 IPR002020 Citrate synthase GO:0046912 SHALO_RS09750 69af0cd655da308460671dde02a36c6c 375 SUPERFAMILY SSF48256 8 375 3.01E-121 T 11-11-2016 IPR002020 Citrate synthase GO:0046912 SHALO_RS09750 69af0cd655da308460671dde02a36c6c 375 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 11 375 2.9E-146 T 11-11-2016 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 SHALO_RS11025 861a70d40ac5f7c100fb090c9fed6102 321 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 138 159 1.3E-23 T 11-11-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 SHALO_RS11025 861a70d40ac5f7c100fb090c9fed6102 321 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 189 199 1.3E-23 T 11-11-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 SHALO_RS11025 861a70d40ac5f7c100fb090c9fed6102 321 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 63 82 1.3E-23 T 11-11-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 SHALO_RS11025 861a70d40ac5f7c100fb090c9fed6102 321 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 13 29 1.3E-23 T 11-11-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 SHALO_RS11025 861a70d40ac5f7c100fb090c9fed6102 321 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 2 319 1.8E-81 T 11-11-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 SHALO_RS11025 861a70d40ac5f7c100fb090c9fed6102 321 SUPERFAMILY SSF52374 2 319 1.1E-76 T 11-11-2016 SHALO_RS11025 861a70d40ac5f7c100fb090c9fed6102 321 Gene3D G3DSA:3.40.50.620 2 197 1.3E-74 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHALO_RS11025 861a70d40ac5f7c100fb090c9fed6102 321 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 18 - T 11-11-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 SHALO_RS11025 861a70d40ac5f7c100fb090c9fed6102 321 Pfam PF00579 tRNA synthetases class I (W and Y) 1 268 7.1E-53 T 11-11-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 SHALO_RS11025 861a70d40ac5f7c100fb090c9fed6102 321 Gene3D G3DSA:1.10.240.10 198 285 2.6E-27 T 11-11-2016 SHALO_RS10330 f4ef08bc7ef4fd8dd30bc83e1c3f34e1 217 TIGRFAM TIGR02951 DMSO_dmsB: dimethylsulfoxide reductase, chain B 7 167 3.3E-74 T 11-11-2016 IPR014297 Dimethylsulphoxide reductase, chain B SHALO_RS10330 f4ef08bc7ef4fd8dd30bc83e1c3f34e1 217 SUPERFAMILY SSF54862 1 202 2.09E-65 T 11-11-2016 SHALO_RS10330 f4ef08bc7ef4fd8dd30bc83e1c3f34e1 217 Gene3D G3DSA:3.30.70.20 5 83 4.4E-16 T 11-11-2016 SHALO_RS10330 f4ef08bc7ef4fd8dd30bc83e1c3f34e1 217 Gene3D G3DSA:3.30.70.20 84 122 2.5E-24 T 11-11-2016 SHALO_RS10330 f4ef08bc7ef4fd8dd30bc83e1c3f34e1 217 Pfam PF12800 4Fe-4S binding domain 13 27 0.029 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_RS10330 f4ef08bc7ef4fd8dd30bc83e1c3f34e1 217 Pfam PF13247 4Fe-4S dicluster domain 63 157 9.9E-23 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_RS10330 f4ef08bc7ef4fd8dd30bc83e1c3f34e1 217 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 103 114 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_RS10330 f4ef08bc7ef4fd8dd30bc83e1c3f34e1 217 Gene3D G3DSA:3.30.70.20 123 174 1.4E-15 T 11-11-2016 SHALO_RS09130 b21e3de4f457cde6902dd48ad15afaa7 628 Gene3D G3DSA:3.30.70.270 212 371 8.4E-52 T 11-11-2016 SHALO_RS09130 b21e3de4f457cde6902dd48ad15afaa7 628 Gene3D G3DSA:3.30.450.20 60 205 4.4E-33 T 11-11-2016 SHALO_RS09130 b21e3de4f457cde6902dd48ad15afaa7 628 Pfam PF00563 EAL domain 380 615 1.4E-72 T 11-11-2016 IPR001633 EAL domain SHALO_RS09130 b21e3de4f457cde6902dd48ad15afaa7 628 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 81 204 7.9E-12 T 11-11-2016 IPR000014 PAS domain SHALO_RS09130 b21e3de4f457cde6902dd48ad15afaa7 628 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 209 359 9.1E-42 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS09130 b21e3de4f457cde6902dd48ad15afaa7 628 SMART SM00091 81 149 0.0038 T 11-11-2016 IPR000014 PAS domain SHALO_RS09130 b21e3de4f457cde6902dd48ad15afaa7 628 SMART SM00086 155 199 6.5E-10 T 11-11-2016 IPR001610 PAC motif SHALO_RS09130 b21e3de4f457cde6902dd48ad15afaa7 628 SMART SM00052 374 620 1.0E-99 T 11-11-2016 IPR001633 EAL domain SHALO_RS09130 b21e3de4f457cde6902dd48ad15afaa7 628 Gene3D G3DSA:3.20.20.450 379 627 3.2E-91 T 11-11-2016 IPR001633 EAL domain SHALO_RS09130 b21e3de4f457cde6902dd48ad15afaa7 628 SUPERFAMILY SSF141868 380 627 1.16E-85 T 11-11-2016 IPR001633 EAL domain SHALO_RS09130 b21e3de4f457cde6902dd48ad15afaa7 628 Pfam PF00990 Diguanylate cyclase, GGDEF domain 210 358 5.5E-47 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS09130 b21e3de4f457cde6902dd48ad15afaa7 628 SUPERFAMILY SSF55785 87 201 1.24E-22 T 11-11-2016 IPR000014 PAS domain SHALO_RS09130 b21e3de4f457cde6902dd48ad15afaa7 628 Pfam PF08447 PAS fold 106 193 8.7E-21 T 11-11-2016 IPR013655 PAS fold-3 GO:0005515 SHALO_RS09130 b21e3de4f457cde6902dd48ad15afaa7 628 SUPERFAMILY SSF55073 215 366 8.63E-45 T 11-11-2016 IPR029787 Nucleotide cyclase SHALO_RS09130 b21e3de4f457cde6902dd48ad15afaa7 628 SMART SM00267 200 364 1.4E-56 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS11715 4cbe19d8415a6c5a36d219a2104694be 142 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 4 126 2.3E-29 T 11-11-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 SHALO_RS11715 4cbe19d8415a6c5a36d219a2104694be 142 Pfam PF01814 Hemerythrin HHE cation binding domain 14 120 2.8E-10 T 11-11-2016 IPR012312 Haemerythrin-like Reactome: R-HSA-390471 SHALO_RS11715 4cbe19d8415a6c5a36d219a2104694be 142 ProSitePatterns PS00550 Hemerythrin family signature. 57 80 - T 11-11-2016 IPR016131 Haemerythrin, iron-binding site GO:0046872 SHALO_RS11715 4cbe19d8415a6c5a36d219a2104694be 142 Gene3D G3DSA:1.20.120.50 2 126 3.0E-29 T 11-11-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 SHALO_RS11715 4cbe19d8415a6c5a36d219a2104694be 142 SUPERFAMILY SSF47188 2 125 2.09E-27 T 11-11-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 SHALO_RS06850 fe353e2b714b8a38465ff0e4af0e73cd 125 Gene3D G3DSA:1.20.120.340 6 118 6.0E-32 T 11-11-2016 IPR003713 Flagellar protein FliS GO:0044780 SHALO_RS06850 fe353e2b714b8a38465ff0e4af0e73cd 125 TIGRFAM TIGR00208 fliS: flagellar protein FliS 1 119 4.5E-41 T 11-11-2016 IPR003713 Flagellar protein FliS GO:0044780 SHALO_RS06850 fe353e2b714b8a38465ff0e4af0e73cd 125 Pfam PF02561 Flagellar protein FliS 7 118 1.7E-33 T 11-11-2016 IPR003713 Flagellar protein FliS GO:0044780 SHALO_RS06850 fe353e2b714b8a38465ff0e4af0e73cd 125 PIRSF PIRSF039090 1 124 7.3E-31 T 11-11-2016 IPR003713 Flagellar protein FliS GO:0044780 SHALO_RS06850 fe353e2b714b8a38465ff0e4af0e73cd 125 SUPERFAMILY SSF101116 6 118 2.22E-32 T 11-11-2016 IPR003713 Flagellar protein FliS GO:0044780 SHALO_RS06840 0fcae59380c207bdd4cc8ca4b9839254 546 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 33 472 3.9E-58 T 11-11-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 SHALO_RS06840 0fcae59380c207bdd4cc8ca4b9839254 546 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 454 474 - T 11-11-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 SHALO_RS06840 0fcae59380c207bdd4cc8ca4b9839254 546 Pfam PF00474 Sodium:solute symporter family 33 472 1.3E-56 T 11-11-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 SHALO_RS03815 c512c4e5fa0d7c27f04300598e93fa0b 1067 Pfam PF08376 Nitrate and nitrite sensing 55 283 4.3E-21 T 11-11-2016 IPR013587 Nitrate/nitrite sensing protein SHALO_RS03815 c512c4e5fa0d7c27f04300598e93fa0b 1067 PRINTS PR00344 Bacterial sensor protein C-terminal signature 560 570 2.0E-11 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS03815 c512c4e5fa0d7c27f04300598e93fa0b 1067 PRINTS PR00344 Bacterial sensor protein C-terminal signature 542 556 2.0E-11 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS03815 c512c4e5fa0d7c27f04300598e93fa0b 1067 PRINTS PR00344 Bacterial sensor protein C-terminal signature 601 614 2.0E-11 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS03815 c512c4e5fa0d7c27f04300598e93fa0b 1067 PRINTS PR00344 Bacterial sensor protein C-terminal signature 577 595 2.0E-11 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS03815 c512c4e5fa0d7c27f04300598e93fa0b 1067 SUPERFAMILY SSF52172 770 888 5.98E-34 T 11-11-2016 IPR011006 CheY-like superfamily SHALO_RS03815 c512c4e5fa0d7c27f04300598e93fa0b 1067 Gene3D G3DSA:3.40.50.2300 950 1066 1.5E-4 T 11-11-2016 SHALO_RS03815 c512c4e5fa0d7c27f04300598e93fa0b 1067 Gene3D G3DSA:3.40.50.2300 770 891 9.9E-39 T 11-11-2016 SHALO_RS03815 c512c4e5fa0d7c27f04300598e93fa0b 1067 Pfam PF00512 His Kinase A (phospho-acceptor) domain 388 451 1.8E-20 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS03815 c512c4e5fa0d7c27f04300598e93fa0b 1067 SMART SM00448 770 886 3.2E-30 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS03815 c512c4e5fa0d7c27f04300598e93fa0b 1067 SMART SM00387 499 617 1.5E-31 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS03815 c512c4e5fa0d7c27f04300598e93fa0b 1067 Gene3D G3DSA:3.30.565.10 438 617 2.7E-40 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS03815 c512c4e5fa0d7c27f04300598e93fa0b 1067 SUPERFAMILY SSF55874 441 614 5.24E-40 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS03815 c512c4e5fa0d7c27f04300598e93fa0b 1067 Pfam PF00072 Response regulator receiver domain 772 886 1.4E-24 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS03815 c512c4e5fa0d7c27f04300598e93fa0b 1067 SUPERFAMILY SSF47384 375 453 1.0E-21 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS03815 c512c4e5fa0d7c27f04300598e93fa0b 1067 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 499 615 1.1E-23 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS03815 c512c4e5fa0d7c27f04300598e93fa0b 1067 SMART SM00388 387 452 1.4E-26 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS03815 c512c4e5fa0d7c27f04300598e93fa0b 1067 Gene3D G3DSA:1.10.287.130 379 437 4.2E-21 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS11940 25aa6fdce1c629722841e2e7667c690b 142 PIRSF PIRSF002181 1 142 1.3E-45 T 11-11-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 SHALO_RS11940 25aa6fdce1c629722841e2e7667c690b 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 16 140 26.591 T 11-11-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 SHALO_RS11940 25aa6fdce1c629722841e2e7667c690b 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 7 137 4.5E-58 T 11-11-2016 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS11940 25aa6fdce1c629722841e2e7667c690b 142 Pfam PF00572 Ribosomal protein L13 16 136 1.1E-51 T 11-11-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 SHALO_RS11940 25aa6fdce1c629722841e2e7667c690b 142 Gene3D G3DSA:3.90.1180.10 7 141 9.4E-56 T 11-11-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 SHALO_RS11940 25aa6fdce1c629722841e2e7667c690b 142 SUPERFAMILY SSF52161 4 138 4.71E-52 T 11-11-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 SHALO_RS12820 d3f3ee4fa9a812e4c53191510ec8e5d8 208 PIRSF PIRSF006324 1 208 1.0E-52 T 11-11-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 SHALO_RS12820 d3f3ee4fa9a812e4c53191510ec8e5d8 208 Pfam PF01810 LysE type translocator 15 206 1.8E-34 T 11-11-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 SHALO_RS10870 bd57c542ad4e136e06949ef6ea18e3c6 304 Gene3D G3DSA:3.40.710.10 12 268 1.0E-69 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like SHALO_RS10870 bd57c542ad4e136e06949ef6ea18e3c6 304 SUPERFAMILY SSF56601 1 267 8.08E-58 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like SHALO_RS10870 bd57c542ad4e136e06949ef6ea18e3c6 304 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 62 73 7.4E-14 T 11-11-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 SHALO_RS10870 bd57c542ad4e136e06949ef6ea18e3c6 304 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 138 151 7.4E-14 T 11-11-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 SHALO_RS10870 bd57c542ad4e136e06949ef6ea18e3c6 304 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 110 127 7.4E-14 T 11-11-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 SHALO_RS10870 bd57c542ad4e136e06949ef6ea18e3c6 304 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 33 255 3.1E-46 T 11-11-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 SHALO_RS13885 af6bd6fada19af0d3c05ec7ba6d17180 161 Gene3D G3DSA:2.40.440.10 24 160 7.7E-14 T 11-11-2016 SHALO_RS13885 af6bd6fada19af0d3c05ec7ba6d17180 161 SUPERFAMILY SSF141523 27 159 1.44E-20 T 11-11-2016 SHALO_RS13885 af6bd6fada19af0d3c05ec7ba6d17180 161 Pfam PF03734 L,D-transpeptidase catalytic domain 28 159 3.3E-14 T 11-11-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 SHALO_RS14925 46bf4ec42e2c33f800291843293cd504 82 Gene3D G3DSA:3.30.1450.10 19 55 2.3E-4 T 11-11-2016 IPR024221 Beta-lactamase-inhibitor protein BLIP, structural domain SHALO_RS14925 46bf4ec42e2c33f800291843293cd504 82 Pfam PF07467 Beta-lactamase inhibitor (BLIP) 17 54 1.8E-5 T 11-11-2016 IPR009099 Beta-lactamase-inhibitor protein BLIP SHALO_RS00025 b7a9b4523a45744cf933ed8c618e2500 131 PIRSF PIRSF027377 1 130 6.0E-49 T 11-11-2016 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 SHALO_RS00025 b7a9b4523a45744cf933ed8c618e2500 131 Pfam PF14489 QueF-like protein 47 124 1.2E-30 T 11-11-2016 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 SHALO_RS00025 b7a9b4523a45744cf933ed8c618e2500 131 Hamap MF_00818 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 131 45.035 T 11-11-2016 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 SHALO_RS00025 b7a9b4523a45744cf933ed8c618e2500 131 Gene3D G3DSA:3.30.1130.10 8 125 4.9E-37 T 11-11-2016 SHALO_RS00025 b7a9b4523a45744cf933ed8c618e2500 131 TIGRFAM TIGR03139 QueF-II: 7-cyano-7-deazaguanine reductase 15 123 1.7E-38 T 11-11-2016 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 SHALO_RS00025 b7a9b4523a45744cf933ed8c618e2500 131 SUPERFAMILY SSF55620 11 116 1.45E-31 T 11-11-2016 SHALO_RS01490 6c45e0344d53763105bf09045374622d 125 Gene3D G3DSA:3.30.300.20 4 116 1.7E-17 T 11-11-2016 IPR015946 K homology domain-like, alpha/beta SHALO_RS01490 6c45e0344d53763105bf09045374622d 125 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 5 115 7.5E-18 T 11-11-2016 IPR000238 Ribosome-binding factor A GO:0006364 SHALO_RS01490 6c45e0344d53763105bf09045374622d 125 ProSitePatterns PS01319 Ribosome-binding factor A signature. 76 97 - T 11-11-2016 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 SHALO_RS01490 6c45e0344d53763105bf09045374622d 125 Pfam PF02033 Ribosome-binding factor A 8 110 8.5E-13 T 11-11-2016 IPR000238 Ribosome-binding factor A GO:0006364 SHALO_RS01490 6c45e0344d53763105bf09045374622d 125 SUPERFAMILY SSF89919 7 101 7.85E-16 T 11-11-2016 IPR023799 Ribosome-binding factor A domain SHALO_RS07285 868239b01c57370c5ed5f1353ccdd765 185 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 185 25.619 T 11-11-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 SHALO_RS07285 868239b01c57370c5ed5f1353ccdd765 185 SUPERFAMILY SSF46929 144 184 6.67E-5 T 11-11-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 SHALO_RS07285 868239b01c57370c5ed5f1353ccdd765 185 Gene3D G3DSA:2.40.50.140 1 64 6.9E-14 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold SHALO_RS07285 868239b01c57370c5ed5f1353ccdd765 185 Pfam PF14520 Helix-hairpin-helix domain 71 129 3.3E-17 T 11-11-2016 SHALO_RS07285 868239b01c57370c5ed5f1353ccdd765 185 SMART SM00278 72 91 84.0 T 11-11-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 SHALO_RS07285 868239b01c57370c5ed5f1353ccdd765 185 SMART SM00278 107 126 0.23 T 11-11-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 SHALO_RS07285 868239b01c57370c5ed5f1353ccdd765 185 Pfam PF01330 RuvA N terminal domain 1 61 1.4E-10 T 11-11-2016 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 SHALO_RS07285 868239b01c57370c5ed5f1353ccdd765 185 Pfam PF07499 RuvA, C-terminal domain 146 185 1.4E-9 T 11-11-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 SHALO_RS07285 868239b01c57370c5ed5f1353ccdd765 185 Gene3D G3DSA:1.10.150.20 66 129 2.2E-23 T 11-11-2016 SHALO_RS07285 868239b01c57370c5ed5f1353ccdd765 185 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 184 4.2E-42 T 11-11-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 SHALO_RS07285 868239b01c57370c5ed5f1353ccdd765 185 SUPERFAMILY SSF50249 1 62 1.37E-7 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold SHALO_RS07285 868239b01c57370c5ed5f1353ccdd765 185 SUPERFAMILY SSF47781 65 134 1.11E-17 T 11-11-2016 IPR010994 RuvA domain 2-like SHALO_RS07285 868239b01c57370c5ed5f1353ccdd765 185 Gene3D G3DSA:1.10.8.10 146 184 2.3E-7 T 11-11-2016 SHALO_RS13355 147faa4bfcb4a77148fd05626f916eb4 338 Pfam PF01497 Periplasmic binding protein 89 276 5.0E-18 T 11-11-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 SHALO_RS13355 147faa4bfcb4a77148fd05626f916eb4 338 Gene3D G3DSA:3.40.50.1980 36 158 5.1E-12 T 11-11-2016 SHALO_RS13355 147faa4bfcb4a77148fd05626f916eb4 338 Gene3D G3DSA:3.40.50.1980 159 302 1.5E-20 T 11-11-2016 SHALO_RS13355 147faa4bfcb4a77148fd05626f916eb4 338 SUPERFAMILY SSF53807 18 302 8.24E-40 T 11-11-2016 SHALO_RS00790 09793a8d3fc00c2b7384cafe550a5bff 212 Pfam PF13489 Methyltransferase domain 65 200 1.5E-20 T 11-11-2016 SHALO_RS00790 09793a8d3fc00c2b7384cafe550a5bff 212 Gene3D G3DSA:3.40.50.150 102 204 4.4E-19 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS00790 09793a8d3fc00c2b7384cafe550a5bff 212 SUPERFAMILY SSF53335 65 202 2.87E-22 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS08965 3671ad5986476672f10b637430f98748 399 Pfam PF05940 NnrS protein 21 398 1.6E-62 T 11-11-2016 IPR010266 NnrS SHALO_RS06615 7a3176c6c9f75ad36c6c37a13ef2c1b0 69 TIGRFAM TIGR02934 nifT_nitrog: probable nitrogen fixation protein FixT 2 67 2.2E-19 T 11-11-2016 IPR009727 NifT/FixU GO:0009399 SHALO_RS06615 7a3176c6c9f75ad36c6c37a13ef2c1b0 69 Gene3D G3DSA:2.40.50.240 3 66 3.2E-20 T 11-11-2016 IPR024044 NifT/FixU barrel-like domain SHALO_RS06615 7a3176c6c9f75ad36c6c37a13ef2c1b0 69 Pfam PF06988 NifT/FixU protein 1 60 1.1E-18 T 11-11-2016 IPR009727 NifT/FixU GO:0009399 SHALO_RS06615 7a3176c6c9f75ad36c6c37a13ef2c1b0 69 SUPERFAMILY SSF159203 3 59 1.31E-15 T 11-11-2016 IPR024044 NifT/FixU barrel-like domain SHALO_RS05345 4d5554dee9451e9ff83b098b16b2b740 152 SUPERFAMILY SSF47188 1 126 2.22E-30 T 11-11-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 SHALO_RS05345 4d5554dee9451e9ff83b098b16b2b740 152 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 5 126 6.1E-35 T 11-11-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 SHALO_RS05345 4d5554dee9451e9ff83b098b16b2b740 152 Gene3D G3DSA:1.20.120.50 2 126 1.3E-33 T 11-11-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 SHALO_RS05345 4d5554dee9451e9ff83b098b16b2b740 152 Pfam PF01814 Hemerythrin HHE cation binding domain 13 123 6.3E-10 T 11-11-2016 IPR012312 Haemerythrin-like Reactome: R-HSA-390471 SHALO_RS05635 d4cd3b463f8ef946c00ce2649613aadc 807 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 362 500 2.0E-22 T 11-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SHALO_RS05635 d4cd3b463f8ef946c00ce2649613aadc 807 SMART SM00464 12 203 9.7E-33 T 11-11-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 SHALO_RS05635 d4cd3b463f8ef946c00ce2649613aadc 807 Gene3D G3DSA:3.30.230.10 601 805 7.2E-70 T 11-11-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SHALO_RS05635 d4cd3b463f8ef946c00ce2649613aadc 807 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 709 717 - T 11-11-2016 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 SHALO_RS05635 d4cd3b463f8ef946c00ce2649613aadc 807 SUPERFAMILY SSF52540 315 582 2.61E-46 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS05635 d4cd3b463f8ef946c00ce2649613aadc 807 PIRSF PIRSF001174 1 807 1.4E-298 T 11-11-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 SHALO_RS05635 d4cd3b463f8ef946c00ce2649613aadc 807 SMART SM00382 358 506 5.1E-13 T 11-11-2016 IPR003593 AAA+ ATPase domain SHALO_RS05635 d4cd3b463f8ef946c00ce2649613aadc 807 Gene3D G3DSA:3.40.50.300 316 511 6.0E-32 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS05635 d4cd3b463f8ef946c00ce2649613aadc 807 SUPERFAMILY SSF54211 606 804 2.62E-48 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SHALO_RS05635 d4cd3b463f8ef946c00ce2649613aadc 807 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 759 777 8.8E-50 T 11-11-2016 SHALO_RS05635 d4cd3b463f8ef946c00ce2649613aadc 807 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 366 385 8.8E-50 T 11-11-2016 SHALO_RS05635 d4cd3b463f8ef946c00ce2649613aadc 807 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 706 725 8.8E-50 T 11-11-2016 SHALO_RS05635 d4cd3b463f8ef946c00ce2649613aadc 807 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 606 622 8.8E-50 T 11-11-2016 SHALO_RS05635 d4cd3b463f8ef946c00ce2649613aadc 807 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 736 755 8.8E-50 T 11-11-2016 SHALO_RS05635 d4cd3b463f8ef946c00ce2649613aadc 807 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 581 665 3.8E-26 T 11-11-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 SHALO_RS05635 d4cd3b463f8ef946c00ce2649613aadc 807 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 684 806 2.9E-52 T 11-11-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 SHALO_RS05635 d4cd3b463f8ef946c00ce2649613aadc 807 Hamap MF_01973 Lon protease [lon]. 13 806 60.591 T 11-11-2016 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 SHALO_RS05635 d4cd3b463f8ef946c00ce2649613aadc 807 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 13 199 2.6E-19 T 11-11-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 SHALO_RS05635 d4cd3b463f8ef946c00ce2649613aadc 807 Gene3D G3DSA:1.10.8.60 512 594 5.0E-31 T 11-11-2016 SHALO_RS05635 d4cd3b463f8ef946c00ce2649613aadc 807 SUPERFAMILY SSF88697 10 113 1.39E-19 T 11-11-2016 IPR015947 PUA-like domain SHALO_RS05635 d4cd3b463f8ef946c00ce2649613aadc 807 TIGRFAM TIGR00763 lon: endopeptidase La 15 805 1.3E-271 T 11-11-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 SHALO_RS01105 1ec1a8de9f66735447f9b841d7b0f6f0 255 Gene3D G3DSA:3.40.50.720 4 124 1.5E-9 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS01105 1ec1a8de9f66735447f9b841d7b0f6f0 255 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 1 254 1.4E-71 T 11-11-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 SHALO_RS01105 1ec1a8de9f66735447f9b841d7b0f6f0 255 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 118 253 2.4E-39 T 11-11-2016 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 SHALO_RS01105 1ec1a8de9f66735447f9b841d7b0f6f0 255 SUPERFAMILY SSF51735 225 255 1.32E-34 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS01105 1ec1a8de9f66735447f9b841d7b0f6f0 255 SUPERFAMILY SSF51735 1 116 1.32E-34 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS01105 1ec1a8de9f66735447f9b841d7b0f6f0 255 PIRSF PIRSF000161 1 255 3.1E-77 T 11-11-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 SHALO_RS01105 1ec1a8de9f66735447f9b841d7b0f6f0 255 Gene3D G3DSA:3.30.360.10 125 223 3.4E-33 T 11-11-2016 SHALO_RS01105 1ec1a8de9f66735447f9b841d7b0f6f0 255 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 139 156 - T 11-11-2016 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 SHALO_RS01105 1ec1a8de9f66735447f9b841d7b0f6f0 255 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 2 254 30.406 T 11-11-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 SHALO_RS01105 1ec1a8de9f66735447f9b841d7b0f6f0 255 SUPERFAMILY SSF55347 117 225 8.94E-33 T 11-11-2016 SHALO_RS01105 1ec1a8de9f66735447f9b841d7b0f6f0 255 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 2 115 8.1E-21 T 11-11-2016 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 SHALO_RS02590 3827ada2bfac0827cae919895d2b95f0 414 SUPERFAMILY SSF140490 324 413 2.22E-29 T 11-11-2016 SHALO_RS02590 3827ada2bfac0827cae919895d2b95f0 414 SMART SM00928 327 372 7.2E-23 T 11-11-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS02590 3827ada2bfac0827cae919895d2b95f0 414 SUPERFAMILY SSF142019 4 237 2.75E-72 T 11-11-2016 SHALO_RS02590 3827ada2bfac0827cae919895d2b95f0 414 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 340 351 - T 11-11-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS02590 3827ada2bfac0827cae919895d2b95f0 414 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 329 410 5.7E-27 T 11-11-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS02590 3827ada2bfac0827cae919895d2b95f0 414 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 45 216 1.2E-43 T 11-11-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS02590 3827ada2bfac0827cae919895d2b95f0 414 SUPERFAMILY SSF142984 239 322 1.15E-23 T 11-11-2016 SHALO_RS02590 3827ada2bfac0827cae919895d2b95f0 414 Pfam PF10531 SLBB domain 241 289 6.2E-11 T 11-11-2016 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS05715 c0360b1fe2906b821341ee84a48b330b 396 SUPERFAMILY SSF143548 16 114 8.37E-23 T 11-11-2016 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 SHALO_RS05715 c0360b1fe2906b821341ee84a48b330b 396 Pfam PF03313 Serine dehydratase alpha chain 143 392 1.2E-79 T 11-11-2016 IPR005130 Serine dehydratase-like, alpha subunit SHALO_RS05715 c0360b1fe2906b821341ee84a48b330b 396 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 71 393 1.3E-104 T 11-11-2016 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 SHALO_RS05715 c0360b1fe2906b821341ee84a48b330b 396 Pfam PF03315 Serine dehydratase beta chain 70 112 2.3E-5 T 11-11-2016 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 SHALO_RS05715 c0360b1fe2906b821341ee84a48b330b 396 Pfam PF03315 Serine dehydratase beta chain 6 64 5.5E-15 T 11-11-2016 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 SHALO_RS05715 c0360b1fe2906b821341ee84a48b330b 396 Gene3D G3DSA:3.30.1330.90 67 116 2.3E-8 T 11-11-2016 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 SHALO_RS05715 c0360b1fe2906b821341ee84a48b330b 396 Gene3D G3DSA:3.30.1330.90 10 65 3.1E-18 T 11-11-2016 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 SHALO_RS01505 ae5894a65c58e5dbeeea2956ea1d6b60 104 SUPERFAMILY SSF140663 6 70 6.93E-9 T 11-11-2016 IPR023203 TTHA0068-like domain SHALO_RS01505 ae5894a65c58e5dbeeea2956ea1d6b60 104 Gene3D G3DSA:1.10.3450.10 5 69 6.5E-7 T 11-11-2016 IPR023203 TTHA0068-like domain SHALO_RS01505 ae5894a65c58e5dbeeea2956ea1d6b60 104 Pfam PF03745 Domain of unknown function (DUF309) 5 67 1.1E-14 T 11-11-2016 IPR005500 Protein of unknown function DUF309 SHALO_RS12170 fcd040cdb226e80f7d151c25e85d1f3e 181 PIRSF PIRSF002161 1 181 3.9E-58 T 11-11-2016 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_RS12170 fcd040cdb226e80f7d151c25e85d1f3e 181 Pfam PF00673 ribosomal L5P family C-terminus 84 177 6.5E-36 T 11-11-2016 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_RS12170 fcd040cdb226e80f7d151c25e85d1f3e 181 SUPERFAMILY SSF55282 3 178 2.35E-64 T 11-11-2016 IPR022803 Ribosomal protein L5 domain Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_RS12170 fcd040cdb226e80f7d151c25e85d1f3e 181 Gene3D G3DSA:3.30.1440.10 1 178 6.8E-65 T 11-11-2016 IPR022803 Ribosomal protein L5 domain Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_RS12170 fcd040cdb226e80f7d151c25e85d1f3e 181 Pfam PF00281 Ribosomal protein L5 24 80 4.8E-20 T 11-11-2016 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_RS12170 fcd040cdb226e80f7d151c25e85d1f3e 181 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 38.499 T 11-11-2016 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_RS12400 8071aad21b43c2dfb50eb73ed1ec74b7 128 SUPERFAMILY SSF52172 3 127 5.12E-25 T 11-11-2016 IPR011006 CheY-like superfamily SHALO_RS12400 8071aad21b43c2dfb50eb73ed1ec74b7 128 Gene3D G3DSA:3.40.50.2300 3 126 3.8E-25 T 11-11-2016 SHALO_RS12400 8071aad21b43c2dfb50eb73ed1ec74b7 128 SMART SM00448 3 122 6.0E-24 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS12400 8071aad21b43c2dfb50eb73ed1ec74b7 128 Pfam PF00072 Response regulator receiver domain 5 122 2.0E-19 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS11645 89ecd60b538ce692ed42c0d95a13fa5c 337 PRINTS PR01021 OMPA domain signature 235 257 7.6E-17 T 11-11-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SHALO_RS11645 89ecd60b538ce692ed42c0d95a13fa5c 337 PRINTS PR01021 OMPA domain signature 265 280 7.6E-17 T 11-11-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SHALO_RS11645 89ecd60b538ce692ed42c0d95a13fa5c 337 PRINTS PR01021 OMPA domain signature 280 296 7.6E-17 T 11-11-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SHALO_RS11645 89ecd60b538ce692ed42c0d95a13fa5c 337 SUPERFAMILY SSF103647 194 236 6.15E-10 T 11-11-2016 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 SHALO_RS11645 89ecd60b538ce692ed42c0d95a13fa5c 337 Pfam PF13505 Outer membrane protein beta-barrel domain 9 161 3.6E-8 T 11-11-2016 IPR027385 Outer membrane protein beta-barrel SHALO_RS11645 89ecd60b538ce692ed42c0d95a13fa5c 337 SUPERFAMILY SSF56925 24 171 6.54E-16 T 11-11-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 SHALO_RS11645 89ecd60b538ce692ed42c0d95a13fa5c 337 Gene3D G3DSA:3.30.1330.60 225 335 7.2E-39 T 11-11-2016 IPR006665 OmpA-like domain SHALO_RS11645 89ecd60b538ce692ed42c0d95a13fa5c 337 Pfam PF00691 OmpA family 234 329 2.0E-25 T 11-11-2016 IPR006665 OmpA-like domain SHALO_RS11645 89ecd60b538ce692ed42c0d95a13fa5c 337 Gene3D G3DSA:4.10.1080.10 197 224 4.8E-6 T 11-11-2016 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 SHALO_RS11645 89ecd60b538ce692ed42c0d95a13fa5c 337 Gene3D G3DSA:2.40.160.20 37 192 7.9E-16 T 11-11-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 SHALO_RS11645 89ecd60b538ce692ed42c0d95a13fa5c 337 SUPERFAMILY SSF103088 223 335 1.16E-36 T 11-11-2016 IPR006665 OmpA-like domain SHALO_RS09925 7dab9071bfe2e8c12722eba85b1e7f44 815 Gene3D G3DSA:3.40.50.300 545 787 1.1E-74 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS09925 7dab9071bfe2e8c12722eba85b1e7f44 815 Gene3D G3DSA:3.40.50.300 169 207 4.1E-8 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS09925 7dab9071bfe2e8c12722eba85b1e7f44 815 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 4 787 6.3E-138 T 11-11-2016 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 SHALO_RS09925 7dab9071bfe2e8c12722eba85b1e7f44 815 SUPERFAMILY SSF51294 205 329 3.14E-35 T 11-11-2016 IPR028992 Hedgehog/Intein (Hint) domain SHALO_RS09925 7dab9071bfe2e8c12722eba85b1e7f44 815 SUPERFAMILY SSF51294 508 547 3.14E-35 T 11-11-2016 IPR028992 Hedgehog/Intein (Hint) domain SHALO_RS09925 7dab9071bfe2e8c12722eba85b1e7f44 815 Gene3D G3DSA:3.10.28.10 404 491 5.1E-15 T 11-11-2016 IPR027434 Homing endonuclease GO:0004519 SHALO_RS09925 7dab9071bfe2e8c12722eba85b1e7f44 815 Pfam PF05204 Homing endonuclease 403 483 4.5E-6 T 11-11-2016 IPR007869 Homing endonuclease PI-Sce GO:0003677|GO:0004519|GO:0030908 SHALO_RS09925 7dab9071bfe2e8c12722eba85b1e7f44 815 Pfam PF03796 DnaB-like helicase C terminal domain 512 786 1.4E-82 T 11-11-2016 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 SHALO_RS09925 7dab9071bfe2e8c12722eba85b1e7f44 815 Pfam PF03796 DnaB-like helicase C terminal domain 174 206 2.9E-8 T 11-11-2016 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 SHALO_RS09925 7dab9071bfe2e8c12722eba85b1e7f44 815 Pfam PF00772 DnaB-like helicase N terminal domain 4 99 1.8E-21 T 11-11-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 SHALO_RS09925 7dab9071bfe2e8c12722eba85b1e7f44 815 Gene3D G3DSA:2.170.16.10 208 347 2.2E-27 T 11-11-2016 IPR028992 Hedgehog/Intein (Hint) domain SHALO_RS09925 7dab9071bfe2e8c12722eba85b1e7f44 815 SUPERFAMILY SSF52540 753 778 4.09E-35 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS09925 7dab9071bfe2e8c12722eba85b1e7f44 815 SUPERFAMILY SSF52540 545 724 4.09E-35 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS09925 7dab9071bfe2e8c12722eba85b1e7f44 815 Pfam PF05203 Hom_end-associated Hint 206 279 4.4E-20 T 11-11-2016 IPR007868 Hom-end-associated Hint GO:0030908 SHALO_RS09925 7dab9071bfe2e8c12722eba85b1e7f44 815 SUPERFAMILY SSF48024 4 107 1.23E-20 T 11-11-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 SHALO_RS09925 7dab9071bfe2e8c12722eba85b1e7f44 815 SUPERFAMILY SSF55608 400 489 3.16E-14 T 11-11-2016 IPR027434 Homing endonuclease GO:0004519 SHALO_RS09925 7dab9071bfe2e8c12722eba85b1e7f44 815 Gene3D G3DSA:1.10.860.10 5 99 9.9E-17 T 11-11-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal SHALO_RS08325 a5712efe803fe0de99d870c40a34d836 260 SUPERFAMILY SSF51735 9 256 6.37E-59 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS08325 a5712efe803fe0de99d870c40a34d836 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 4.2E-32 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_RS08325 a5712efe803fe0de99d870c40a34d836 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 220 240 4.2E-32 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_RS08325 a5712efe803fe0de99d870c40a34d836 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 4.2E-32 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_RS08325 a5712efe803fe0de99d870c40a34d836 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 4.2E-32 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_RS08325 a5712efe803fe0de99d870c40a34d836 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 4.2E-32 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_RS08325 a5712efe803fe0de99d870c40a34d836 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 4.2E-32 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_RS08325 a5712efe803fe0de99d870c40a34d836 260 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 255 4.3E-38 T 11-11-2016 SHALO_RS08325 a5712efe803fe0de99d870c40a34d836 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 76 87 4.8E-8 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_RS08325 a5712efe803fe0de99d870c40a34d836 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 4.8E-8 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_RS08325 a5712efe803fe0de99d870c40a34d836 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 4.8E-8 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_RS08325 a5712efe803fe0de99d870c40a34d836 260 Gene3D G3DSA:3.40.50.720 6 256 1.0E-57 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS08325 a5712efe803fe0de99d870c40a34d836 260 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 11-11-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 SHALO_RS12880 19b271bbb5d1afaedb95223517c3d3e2 465 SUPERFAMILY SSF47384 234 313 1.86E-13 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS12880 19b271bbb5d1afaedb95223517c3d3e2 465 Gene3D G3DSA:1.10.287.130 243 312 4.6E-9 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS12880 19b271bbb5d1afaedb95223517c3d3e2 465 SMART SM00388 251 317 3.1E-10 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS12880 19b271bbb5d1afaedb95223517c3d3e2 465 PRINTS PR00344 Bacterial sensor protein C-terminal signature 395 409 9.1E-10 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS12880 19b271bbb5d1afaedb95223517c3d3e2 465 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 423 9.1E-10 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS12880 19b271bbb5d1afaedb95223517c3d3e2 465 PRINTS PR00344 Bacterial sensor protein C-terminal signature 429 447 9.1E-10 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS12880 19b271bbb5d1afaedb95223517c3d3e2 465 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 365 463 1.4E-19 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS12880 19b271bbb5d1afaedb95223517c3d3e2 465 Gene3D G3DSA:3.30.565.10 320 463 2.6E-34 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS12880 19b271bbb5d1afaedb95223517c3d3e2 465 SMART SM00387 362 465 1.3E-23 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS12880 19b271bbb5d1afaedb95223517c3d3e2 465 Pfam PF00672 HAMP domain 178 247 1.8E-6 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SHALO_RS12880 19b271bbb5d1afaedb95223517c3d3e2 465 SUPERFAMILY SSF55874 307 465 6.68E-34 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS12880 19b271bbb5d1afaedb95223517c3d3e2 465 Pfam PF00512 His Kinase A (phospho-acceptor) domain 253 314 1.3E-8 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS01630 256272bfd4b1dddbc2d2eafa9e1d7f5b 226 Gene3D G3DSA:3.40.50.150 1 218 7.4E-33 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS01630 256272bfd4b1dddbc2d2eafa9e1d7f5b 226 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 1 225 1.6E-64 T 11-11-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 SHALO_RS01630 256272bfd4b1dddbc2d2eafa9e1d7f5b 226 Pfam PF01209 ubiE/COQ5 methyltransferase family 1 220 2.9E-38 T 11-11-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 SHALO_RS01630 256272bfd4b1dddbc2d2eafa9e1d7f5b 226 SUPERFAMILY SSF53335 1 215 1.49E-28 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS01630 256272bfd4b1dddbc2d2eafa9e1d7f5b 226 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 9 24 - T 11-11-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 SHALO_RS01500 19c130faadc4fcaec1767d9e6d4a9346 337 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 7 130 7.3E-14 T 11-11-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 SHALO_RS01500 19c130faadc4fcaec1767d9e6d4a9346 337 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 10 254 3.3E-60 T 11-11-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525 SHALO_RS01500 19c130faadc4fcaec1767d9e6d4a9346 337 Gene3D G3DSA:3.40.430.10 175 282 1.8E-17 T 11-11-2016 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 SHALO_RS01500 19c130faadc4fcaec1767d9e6d4a9346 337 SUPERFAMILY SSF53597 175 332 5.13E-25 T 11-11-2016 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 SHALO_RS01500 19c130faadc4fcaec1767d9e6d4a9346 337 SUPERFAMILY SSF53927 6 63 5.38E-29 T 11-11-2016 IPR016193 Cytidine deaminase-like GO:0003824 SHALO_RS01500 19c130faadc4fcaec1767d9e6d4a9346 337 SUPERFAMILY SSF53927 91 172 5.38E-29 T 11-11-2016 IPR016193 Cytidine deaminase-like GO:0003824 SHALO_RS01500 19c130faadc4fcaec1767d9e6d4a9346 337 Gene3D G3DSA:3.40.140.10 6 174 4.8E-21 T 11-11-2016 SHALO_RS14380 b056b5c5a572dfc2d9affc78302ef256 473 Gene3D G3DSA:3.30.565.10 303 471 8.9E-40 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS14380 b056b5c5a572dfc2d9affc78302ef256 473 SUPERFAMILY SSF55874 306 471 4.32E-40 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS14380 b056b5c5a572dfc2d9affc78302ef256 473 Gene3D G3DSA:1.10.287.130 244 302 5.2E-13 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS14380 b056b5c5a572dfc2d9affc78302ef256 473 SMART SM00387 361 473 2.9E-35 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS14380 b056b5c5a572dfc2d9affc78302ef256 473 SMART SM00388 250 316 5.2E-14 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS14380 b056b5c5a572dfc2d9affc78302ef256 473 PRINTS PR00344 Bacterial sensor protein C-terminal signature 416 426 2.4E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS14380 b056b5c5a572dfc2d9affc78302ef256 473 PRINTS PR00344 Bacterial sensor protein C-terminal signature 398 412 2.4E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS14380 b056b5c5a572dfc2d9affc78302ef256 473 PRINTS PR00344 Bacterial sensor protein C-terminal signature 433 451 2.4E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS14380 b056b5c5a572dfc2d9affc78302ef256 473 PRINTS PR00344 Bacterial sensor protein C-terminal signature 457 470 2.4E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS14380 b056b5c5a572dfc2d9affc78302ef256 473 Pfam PF00512 His Kinase A (phospho-acceptor) domain 252 314 2.1E-12 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS14380 b056b5c5a572dfc2d9affc78302ef256 473 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 361 471 6.2E-23 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS14380 b056b5c5a572dfc2d9affc78302ef256 473 SUPERFAMILY SSF47384 242 315 7.26E-14 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS08060 a9c3fc4af5051f69099f7c4f32c15e18 563 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 166 1.4E-58 T 11-11-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 SHALO_RS08060 a9c3fc4af5051f69099f7c4f32c15e18 563 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 3 559 3.4E-247 T 11-11-2016 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 SHALO_RS08060 a9c3fc4af5051f69099f7c4f32c15e18 563 SUPERFAMILY SSF52467 185 356 2.55E-60 T 11-11-2016 IPR029035 DHS-like NAD/FAD-binding domain SHALO_RS08060 a9c3fc4af5051f69099f7c4f32c15e18 563 SUPERFAMILY SSF52518 2 182 4.32E-64 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold SHALO_RS08060 a9c3fc4af5051f69099f7c4f32c15e18 563 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 388 536 2.9E-53 T 11-11-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 SHALO_RS08060 a9c3fc4af5051f69099f7c4f32c15e18 563 Gene3D G3DSA:3.40.50.1220 187 358 1.8E-63 T 11-11-2016 IPR029035 DHS-like NAD/FAD-binding domain SHALO_RS08060 a9c3fc4af5051f69099f7c4f32c15e18 563 SUPERFAMILY SSF52518 366 562 2.66E-71 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold SHALO_RS08060 a9c3fc4af5051f69099f7c4f32c15e18 563 Gene3D G3DSA:3.40.50.970 2 176 6.1E-74 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold SHALO_RS08060 a9c3fc4af5051f69099f7c4f32c15e18 563 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 425 444 - T 11-11-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 SHALO_RS08060 a9c3fc4af5051f69099f7c4f32c15e18 563 Gene3D G3DSA:3.40.50.970 359 562 3.6E-79 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold SHALO_RS08060 a9c3fc4af5051f69099f7c4f32c15e18 563 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 193 327 3.7E-46 T 11-11-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 SHALO_RS05380 138b4baef982b91ff337a19170c46ae6 289 Pfam PF12833 Helix-turn-helix domain 210 284 6.5E-17 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SHALO_RS05380 138b4baef982b91ff337a19170c46ae6 289 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 237 279 - T 11-11-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 SHALO_RS05380 138b4baef982b91ff337a19170c46ae6 289 SUPERFAMILY SSF46689 236 286 3.23E-13 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 SHALO_RS05380 138b4baef982b91ff337a19170c46ae6 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 252 267 5.9E-5 T 11-11-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SHALO_RS05380 138b4baef982b91ff337a19170c46ae6 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 267 283 5.9E-5 T 11-11-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SHALO_RS05380 138b4baef982b91ff337a19170c46ae6 289 SMART SM00342 200 283 4.4E-19 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SHALO_RS05380 138b4baef982b91ff337a19170c46ae6 289 Gene3D G3DSA:1.10.10.60 236 286 5.9E-16 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 SHALO_RS08480 ca1073686c8bb736f606363eebe76d6e 309 SUPERFAMILY SSF53686 2 303 1.96E-102 T 11-11-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SHALO_RS08480 ca1073686c8bb736f606363eebe76d6e 309 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 7 293 1.3E-69 T 11-11-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SHALO_RS08480 ca1073686c8bb736f606363eebe76d6e 309 TIGRFAM TIGR01139 cysK: cysteine synthase A 7 304 9.4E-136 T 11-11-2016 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 SHALO_RS08480 ca1073686c8bb736f606363eebe76d6e 309 Gene3D G3DSA:3.40.50.1100 134 304 1.5E-79 T 11-11-2016 SHALO_RS08480 ca1073686c8bb736f606363eebe76d6e 309 Gene3D G3DSA:3.40.50.1100 37 133 2.6E-38 T 11-11-2016 SHALO_RS08480 ca1073686c8bb736f606363eebe76d6e 309 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 32 50 - T 11-11-2016 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 SHALO_RS08480 ca1073686c8bb736f606363eebe76d6e 309 TIGRFAM TIGR01136 cysKM: cysteine synthase 7 304 3.9E-131 T 11-11-2016 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 SHALO_RS09605 526c4faafdafad69cf30aa1d2e5d054b 133 SMART SM00086 78 121 4.5E-7 T 11-11-2016 IPR001610 PAC motif SHALO_RS09605 526c4faafdafad69cf30aa1d2e5d054b 133 SUPERFAMILY SSF55785 8 122 1.45E-21 T 11-11-2016 IPR000014 PAS domain SHALO_RS09605 526c4faafdafad69cf30aa1d2e5d054b 133 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 3 124 1.4E-9 T 11-11-2016 IPR000014 PAS domain SHALO_RS09605 526c4faafdafad69cf30aa1d2e5d054b 133 Pfam PF08447 PAS fold 26 115 2.6E-23 T 11-11-2016 IPR013655 PAS fold-3 GO:0005515 SHALO_RS09605 526c4faafdafad69cf30aa1d2e5d054b 133 Gene3D G3DSA:3.30.450.20 4 127 3.6E-30 T 11-11-2016 SHALO_RS01040 d60b8a79711d13df929b1d817f692e5d 384 Pfam PF00994 Probable molybdopterin binding domain 171 299 9.1E-17 T 11-11-2016 IPR001453 MoaB/Mog domain SHALO_RS01040 d60b8a79711d13df929b1d817f692e5d 384 SUPERFAMILY SSF63882 3 165 1.31E-30 T 11-11-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 SHALO_RS01040 d60b8a79711d13df929b1d817f692e5d 384 Pfam PF03453 MoeA N-terminal region (domain I and II) 3 157 4.5E-24 T 11-11-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 SHALO_RS01040 d60b8a79711d13df929b1d817f692e5d 384 SMART SM00852 170 299 6.2E-14 T 11-11-2016 IPR001453 MoaB/Mog domain SHALO_RS01040 d60b8a79711d13df929b1d817f692e5d 384 Gene3D G3DSA:2.170.190.11 64 120 3.7E-7 T 11-11-2016 SHALO_RS01040 d60b8a79711d13df929b1d817f692e5d 384 Gene3D G3DSA:3.40.980.10 151 304 2.3E-32 T 11-11-2016 IPR001453 MoaB/Mog domain SHALO_RS01040 d60b8a79711d13df929b1d817f692e5d 384 SUPERFAMILY SSF53218 166 308 2.75E-25 T 11-11-2016 IPR001453 MoaB/Mog domain SHALO_RS01040 d60b8a79711d13df929b1d817f692e5d 384 Gene3D G3DSA:3.90.105.10 121 150 1.0E-12 T 11-11-2016 SHALO_RS09285 8aac20670764c107122da4dcd959f924 368 SUPERFAMILY SSF109604 207 314 8.37E-12 T 11-11-2016 SHALO_RS09285 8aac20670764c107122da4dcd959f924 368 Gene3D G3DSA:3.90.550.10 2 196 3.0E-28 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases SHALO_RS09285 8aac20670764c107122da4dcd959f924 368 Gene3D G3DSA:1.10.3210.10 207 313 1.9E-9 T 11-11-2016 IPR006674 HD domain SHALO_RS09285 8aac20670764c107122da4dcd959f924 368 SUPERFAMILY SSF53448 6 197 1.78E-25 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases SHALO_RS09285 8aac20670764c107122da4dcd959f924 368 Pfam PF12804 MobA-like NTP transferase domain 8 166 3.6E-31 T 11-11-2016 IPR025877 MobA-like NTP transferase SHALO_RS00510 8092e0651d31a3886187130f1391262e 442 Gene3D G3DSA:1.10.40.30 356 441 2.2E-34 T 11-11-2016 SHALO_RS00510 8092e0651d31a3886187130f1391262e 442 PRINTS PR00149 Fumarate lyase superfamily signature 133 151 4.5E-23 T 11-11-2016 IPR000362 Fumarate lyase family SHALO_RS00510 8092e0651d31a3886187130f1391262e 442 PRINTS PR00149 Fumarate lyase superfamily signature 88 106 4.5E-23 T 11-11-2016 IPR000362 Fumarate lyase family SHALO_RS00510 8092e0651d31a3886187130f1391262e 442 PRINTS PR00149 Fumarate lyase superfamily signature 216 243 4.5E-23 T 11-11-2016 IPR000362 Fumarate lyase family SHALO_RS00510 8092e0651d31a3886187130f1391262e 442 PRINTS PR00149 Fumarate lyase superfamily signature 261 277 4.5E-23 T 11-11-2016 IPR000362 Fumarate lyase family SHALO_RS00510 8092e0651d31a3886187130f1391262e 442 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 1 441 2.1E-170 T 11-11-2016 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 SHALO_RS00510 8092e0651d31a3886187130f1391262e 442 Gene3D G3DSA:1.10.275.10 3 90 5.4E-32 T 11-11-2016 IPR024083 Fumarase/histidase, N-terminal SHALO_RS00510 8092e0651d31a3886187130f1391262e 442 SMART SM00998 349 441 2.9E-35 T 11-11-2016 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 SHALO_RS00510 8092e0651d31a3886187130f1391262e 442 ProSitePatterns PS00163 Fumarate lyases signature. 261 270 - T 11-11-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 SHALO_RS00510 8092e0651d31a3886187130f1391262e 442 SUPERFAMILY SSF48557 3 441 4.24E-126 T 11-11-2016 IPR008948 L-Aspartase-like GO:0003824 SHALO_RS00510 8092e0651d31a3886187130f1391262e 442 PRINTS PR00145 Argininosuccinate lyase family signature 261 277 4.3E-7 T 11-11-2016 SHALO_RS00510 8092e0651d31a3886187130f1391262e 442 PRINTS PR00145 Argininosuccinate lyase family signature 87 109 4.3E-7 T 11-11-2016 SHALO_RS00510 8092e0651d31a3886187130f1391262e 442 PRINTS PR00145 Argininosuccinate lyase family signature 128 148 4.3E-7 T 11-11-2016 SHALO_RS00510 8092e0651d31a3886187130f1391262e 442 PRINTS PR00145 Argininosuccinate lyase family signature 216 240 4.3E-7 T 11-11-2016 SHALO_RS00510 8092e0651d31a3886187130f1391262e 442 Gene3D G3DSA:1.20.200.10 91 355 4.9E-89 T 11-11-2016 SHALO_RS00510 8092e0651d31a3886187130f1391262e 442 Pfam PF10397 Adenylosuccinate lyase C-terminus 350 440 3.3E-26 T 11-11-2016 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 SHALO_RS00510 8092e0651d31a3886187130f1391262e 442 Pfam PF00206 Lyase 7 284 4.4E-52 T 11-11-2016 IPR022761 Fumarate lyase, N-terminal SHALO_RS08570 0b8b7a862903b435492b249b79871980 377 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 16 369 1.1E-88 T 11-11-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase SHALO_RS08570 0b8b7a862903b435492b249b79871980 377 SUPERFAMILY SSF53383 4 373 1.27E-87 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase SHALO_RS08570 0b8b7a862903b435492b249b79871980 377 PIRSF PIRSF000390 1 376 1.6E-80 T 11-11-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase SHALO_RS08570 0b8b7a862903b435492b249b79871980 377 Gene3D G3DSA:3.90.1150.10 255 375 2.0E-33 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SHALO_RS08570 0b8b7a862903b435492b249b79871980 377 Gene3D G3DSA:3.40.640.10 4 252 5.5E-62 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SHALO_RS01410 852a56319b80a8451ef6714bced7a202 83 Gene3D G3DSA:3.30.70.20 4 74 8.5E-19 T 11-11-2016 SHALO_RS01410 852a56319b80a8451ef6714bced7a202 83 Pfam PF00037 4Fe-4S binding domain 6 25 8.6E-6 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_RS01410 852a56319b80a8451ef6714bced7a202 83 SUPERFAMILY SSF54862 5 77 1.06E-18 T 11-11-2016 SHALO_RS01410 852a56319b80a8451ef6714bced7a202 83 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_RS11040 1367519befb84550864c49e0796f3c51 519 SUPERFAMILY SSF51569 3 291 5.13E-97 T 11-11-2016 SHALO_RS11040 1367519befb84550864c49e0796f3c51 519 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 13 29 - T 11-11-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 SHALO_RS11040 1367519befb84550864c49e0796f3c51 519 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 198 211 - T 11-11-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 SHALO_RS11040 1367519befb84550864c49e0796f3c51 519 SMART SM00917 369 502 1.6E-29 T 11-11-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 SHALO_RS11040 1367519befb84550864c49e0796f3c51 519 Gene3D G3DSA:3.20.20.70 3 347 1.4E-146 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_RS11040 1367519befb84550864c49e0796f3c51 519 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 3 511 42.307 T 11-11-2016 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 SHALO_RS11040 1367519befb84550864c49e0796f3c51 519 Pfam PF08502 LeuA allosteric (dimerisation) domain 369 501 3.8E-25 T 11-11-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 SHALO_RS11040 1367519befb84550864c49e0796f3c51 519 Pfam PF00682 HMGL-like 5 273 1.7E-100 T 11-11-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 SHALO_RS11040 1367519befb84550864c49e0796f3c51 519 SUPERFAMILY SSF110921 401 500 2.75E-19 T 11-11-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 SHALO_RS11040 1367519befb84550864c49e0796f3c51 519 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 5 499 2.7E-211 T 11-11-2016 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 SHALO_RS09015 5ac4325a9b2fd9e71690328e50a36ddf 372 SUPERFAMILY SSF55307 208 323 7.33E-39 T 11-11-2016 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 SHALO_RS09015 5ac4325a9b2fd9e71690328e50a36ddf 372 Gene3D G3DSA:3.40.50.1440 15 217 2.9E-80 T 11-11-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 SHALO_RS09015 5ac4325a9b2fd9e71690328e50a36ddf 372 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 16 173 1.6E-38 T 11-11-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 SHALO_RS09015 5ac4325a9b2fd9e71690328e50a36ddf 372 Pfam PF12327 FtsZ family, C-terminal domain 224 320 5.3E-24 T 11-11-2016 IPR024757 Cell division protein FtsZ, C-terminal SHALO_RS09015 5ac4325a9b2fd9e71690328e50a36ddf 372 SMART SM00865 209 328 7.5E-46 T 11-11-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-1445148|Reactome: R-HSA-190840|Reactome: R-HSA-190861|Reactome: R-HSA-2132295|Reactome: R-HSA-2467813|Reactome: R-HSA-2500257|Reactome: R-HSA-380320|Reactome: R-HSA-437239|Reactome: R-HSA-5617833|Reactome: R-HSA-5626467|Reactome: R-HSA-5663220|Reactome: R-HSA-6807878|Reactome: R-HSA-6811434|Reactome: R-HSA-6811436|Reactome: R-HSA-68877|Reactome: R-HSA-8852276|Reactome: R-HSA-983189 SHALO_RS09015 5ac4325a9b2fd9e71690328e50a36ddf 372 Gene3D G3DSA:3.30.1330.20 218 323 1.2E-40 T 11-11-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-1445148|Reactome: R-HSA-190840|Reactome: R-HSA-190861|Reactome: R-HSA-2132295|Reactome: R-HSA-2467813|Reactome: R-HSA-2500257|Reactome: R-HSA-380320|Reactome: R-HSA-437239|Reactome: R-HSA-5617833|Reactome: R-HSA-5626467|Reactome: R-HSA-5663220|Reactome: R-HSA-6807878|Reactome: R-HSA-6811434|Reactome: R-HSA-6811436|Reactome: R-HSA-68877|Reactome: R-HSA-8852276|Reactome: R-HSA-983189 SHALO_RS09015 5ac4325a9b2fd9e71690328e50a36ddf 372 SMART SM00864 16 205 9.8E-100 T 11-11-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 SHALO_RS09015 5ac4325a9b2fd9e71690328e50a36ddf 372 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 12 352 34.642 T 11-11-2016 IPR000158 Cell division protein FtsZ GO:0005525 SHALO_RS09015 5ac4325a9b2fd9e71690328e50a36ddf 372 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 11 340 4.4E-114 T 11-11-2016 IPR000158 Cell division protein FtsZ GO:0005525 SHALO_RS09015 5ac4325a9b2fd9e71690328e50a36ddf 372 PRINTS PR00423 Cell division protein FtsZ signature 126 147 2.8E-38 T 11-11-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 SHALO_RS09015 5ac4325a9b2fd9e71690328e50a36ddf 372 PRINTS PR00423 Cell division protein FtsZ signature 98 118 2.8E-38 T 11-11-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 SHALO_RS09015 5ac4325a9b2fd9e71690328e50a36ddf 372 PRINTS PR00423 Cell division protein FtsZ signature 189 211 2.8E-38 T 11-11-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 SHALO_RS09015 5ac4325a9b2fd9e71690328e50a36ddf 372 PRINTS PR00423 Cell division protein FtsZ signature 214 235 2.8E-38 T 11-11-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 SHALO_RS09015 5ac4325a9b2fd9e71690328e50a36ddf 372 SUPERFAMILY SSF52490 15 206 1.96E-60 T 11-11-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 SHALO_RS09015 5ac4325a9b2fd9e71690328e50a36ddf 372 ProSitePatterns PS01135 FtsZ protein signature 2. 97 118 - T 11-11-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 SHALO_RS10550 e79a8ceb5294ac0fd56b061b707cfb0f 1023 SUPERFAMILY SSF52172 563 693 9.39E-26 T 11-11-2016 IPR011006 CheY-like superfamily SHALO_RS10550 e79a8ceb5294ac0fd56b061b707cfb0f 1023 Gene3D G3DSA:1.10.287.130 312 380 8.3E-18 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS10550 e79a8ceb5294ac0fd56b061b707cfb0f 1023 Gene3D G3DSA:3.30.565.10 385 547 2.0E-41 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS10550 e79a8ceb5294ac0fd56b061b707cfb0f 1023 Gene3D G3DSA:3.40.190.10 27 113 1.5E-8 T 11-11-2016 SHALO_RS10550 e79a8ceb5294ac0fd56b061b707cfb0f 1023 Gene3D G3DSA:3.40.190.10 207 248 1.5E-8 T 11-11-2016 SHALO_RS10550 e79a8ceb5294ac0fd56b061b707cfb0f 1023 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 431 545 1.7E-25 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS10550 e79a8ceb5294ac0fd56b061b707cfb0f 1023 Gene3D G3DSA:1.20.120.160 853 945 1.3E-15 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SHALO_RS10550 e79a8ceb5294ac0fd56b061b707cfb0f 1023 Pfam PF00512 His Kinase A (phospho-acceptor) domain 319 383 2.3E-19 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS10550 e79a8ceb5294ac0fd56b061b707cfb0f 1023 Gene3D G3DSA:3.40.50.2300 562 697 5.2E-25 T 11-11-2016 SHALO_RS10550 e79a8ceb5294ac0fd56b061b707cfb0f 1023 SMART SM00387 431 547 6.8E-35 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS10550 e79a8ceb5294ac0fd56b061b707cfb0f 1023 Gene3D G3DSA:3.40.190.10 138 203 7.0E-5 T 11-11-2016 SHALO_RS10550 e79a8ceb5294ac0fd56b061b707cfb0f 1023 SMART SM00073 856 947 0.0076 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SHALO_RS10550 e79a8ceb5294ac0fd56b061b707cfb0f 1023 SUPERFAMILY SSF52172 704 827 3.27E-37 T 11-11-2016 IPR011006 CheY-like superfamily SHALO_RS10550 e79a8ceb5294ac0fd56b061b707cfb0f 1023 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 35 244 8.9E-19 T 11-11-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SHALO_RS10550 e79a8ceb5294ac0fd56b061b707cfb0f 1023 SUPERFAMILY SSF55874 373 549 2.23E-43 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS10550 e79a8ceb5294ac0fd56b061b707cfb0f 1023 SUPERFAMILY SSF47226 802 921 7.46E-15 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SHALO_RS10550 e79a8ceb5294ac0fd56b061b707cfb0f 1023 Pfam PF00072 Response regulator receiver domain 708 819 7.1E-26 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS10550 e79a8ceb5294ac0fd56b061b707cfb0f 1023 Pfam PF00072 Response regulator receiver domain 565 676 3.8E-16 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS10550 e79a8ceb5294ac0fd56b061b707cfb0f 1023 Pfam PF01627 Hpt domain 880 936 2.6E-9 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SHALO_RS10550 e79a8ceb5294ac0fd56b061b707cfb0f 1023 SUPERFAMILY SSF47384 303 385 1.29E-21 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS10550 e79a8ceb5294ac0fd56b061b707cfb0f 1023 Gene3D G3DSA:3.40.50.2300 701 825 1.4E-39 T 11-11-2016 SHALO_RS10550 e79a8ceb5294ac0fd56b061b707cfb0f 1023 SMART SM00062 29 247 7.7E-8 T 11-11-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SHALO_RS10550 e79a8ceb5294ac0fd56b061b707cfb0f 1023 SMART SM00448 706 819 4.7E-37 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS10550 e79a8ceb5294ac0fd56b061b707cfb0f 1023 SMART SM00448 563 677 2.5E-20 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS10550 e79a8ceb5294ac0fd56b061b707cfb0f 1023 SMART SM00388 319 384 1.4E-24 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS10550 e79a8ceb5294ac0fd56b061b707cfb0f 1023 PRINTS PR00344 Bacterial sensor protein C-terminal signature 472 486 3.2E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS10550 e79a8ceb5294ac0fd56b061b707cfb0f 1023 PRINTS PR00344 Bacterial sensor protein C-terminal signature 507 525 3.2E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS10550 e79a8ceb5294ac0fd56b061b707cfb0f 1023 PRINTS PR00344 Bacterial sensor protein C-terminal signature 531 544 3.2E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS10550 e79a8ceb5294ac0fd56b061b707cfb0f 1023 SUPERFAMILY SSF53850 35 247 8.36E-28 T 11-11-2016 SHALO_RS05375 a0a71b36fe1700dcadc37a501ad1240e 274 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 193 269 5.7E-25 T 11-11-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 SHALO_RS05375 a0a71b36fe1700dcadc37a501ad1240e 274 SUPERFAMILY SSF53155 114 177 2.55E-14 T 11-11-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 SHALO_RS05375 a0a71b36fe1700dcadc37a501ad1240e 274 SUPERFAMILY SSF46689 8 58 7.35E-12 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 SHALO_RS05375 a0a71b36fe1700dcadc37a501ad1240e 274 Pfam PF12833 Helix-turn-helix domain 32 108 9.6E-15 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SHALO_RS05375 a0a71b36fe1700dcadc37a501ad1240e 274 Gene3D G3DSA:1.10.10.60 64 106 3.7E-5 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 SHALO_RS05375 a0a71b36fe1700dcadc37a501ad1240e 274 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 240 246 - T 11-11-2016 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 SHALO_RS05375 a0a71b36fe1700dcadc37a501ad1240e 274 Gene3D G3DSA:3.30.160.70 107 190 5.3E-21 T 11-11-2016 SHALO_RS05375 a0a71b36fe1700dcadc37a501ad1240e 274 SUPERFAMILY SSF46767 189 270 1.57E-26 T 11-11-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 SHALO_RS05375 a0a71b36fe1700dcadc37a501ad1240e 274 SMART SM00342 25 107 5.5E-17 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SHALO_RS05375 a0a71b36fe1700dcadc37a501ad1240e 274 Gene3D G3DSA:1.10.10.10 191 270 5.0E-27 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS05375 a0a71b36fe1700dcadc37a501ad1240e 274 Gene3D G3DSA:1.10.10.60 7 63 1.3E-17 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 SHALO_RS05375 a0a71b36fe1700dcadc37a501ad1240e 274 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 190 269 2.5E-29 T 11-11-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 SHALO_RS02885 086fab66147c584bb31372f736bc0138 293 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 184 277 4.9E-25 T 11-11-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS SHALO_RS02885 086fab66147c584bb31372f736bc0138 293 Pfam PF01467 Cytidylyltransferase-like 5 156 6.0E-19 T 11-11-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 SHALO_RS02885 086fab66147c584bb31372f736bc0138 293 Pfam PF02410 Ribosomal silencing factor during starvation 186 276 1.3E-19 T 11-11-2016 SHALO_RS02885 086fab66147c584bb31372f736bc0138 293 SUPERFAMILY SSF52374 3 160 4.02E-35 T 11-11-2016 SHALO_RS02885 086fab66147c584bb31372f736bc0138 293 SUPERFAMILY SSF81301 182 277 2.13E-23 T 11-11-2016 SHALO_RS02885 086fab66147c584bb31372f736bc0138 293 Gene3D G3DSA:3.30.460.10 182 278 1.0E-23 T 11-11-2016 SHALO_RS02885 086fab66147c584bb31372f736bc0138 293 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 1 178 21.386 T 11-11-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: R-HSA-196807 SHALO_RS02885 086fab66147c584bb31372f736bc0138 293 Gene3D G3DSA:3.40.50.620 2 172 1.3E-41 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHALO_RS02885 086fab66147c584bb31372f736bc0138 293 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 176 280 17.369 T 11-11-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS SHALO_RS02885 086fab66147c584bb31372f736bc0138 293 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 5 172 1.1E-37 T 11-11-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: R-HSA-196807 SHALO_RS02885 086fab66147c584bb31372f736bc0138 293 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 3 53 4.7E-8 T 11-11-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 SHALO_RS07170 de73f936a17f07ef61a695ba0e9b32b7 377 SUPERFAMILY SSF52518 6 260 1.86E-67 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold SHALO_RS07170 de73f936a17f07ef61a695ba0e9b32b7 377 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 16 243 5.9E-63 T 11-11-2016 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 SHALO_RS07170 de73f936a17f07ef61a695ba0e9b32b7 377 SUPERFAMILY SSF52922 268 376 3.01E-23 T 11-11-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 SHALO_RS07170 de73f936a17f07ef61a695ba0e9b32b7 377 Gene3D G3DSA:3.40.50.920 268 376 5.6E-21 T 11-11-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 SHALO_RS07170 de73f936a17f07ef61a695ba0e9b32b7 377 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 276 367 1.2E-22 T 11-11-2016 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II SHALO_RS07170 de73f936a17f07ef61a695ba0e9b32b7 377 Gene3D G3DSA:3.40.50.970 4 190 1.6E-74 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold SHALO_RS09400 070be31effbb31e182e6ae9582c9a176 355 Gene3D G3DSA:2.30.30.60 197 246 7.7E-12 T 11-11-2016 SHALO_RS09400 070be31effbb31e182e6ae9582c9a176 355 SUPERFAMILY SSF82861 100 180 6.93E-10 T 11-11-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 SHALO_RS09400 070be31effbb31e182e6ae9582c9a176 355 SUPERFAMILY SSF82689 248 350 1.83E-18 T 11-11-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 SHALO_RS09400 070be31effbb31e182e6ae9582c9a176 355 Gene3D G3DSA:3.30.70.100 250 337 2.1E-11 T 11-11-2016 SHALO_RS09400 070be31effbb31e182e6ae9582c9a176 355 SUPERFAMILY SSF50182 182 246 5.56E-13 T 11-11-2016 IPR010920 LSM domain SHALO_RS09400 070be31effbb31e182e6ae9582c9a176 355 Pfam PF00924 Mechanosensitive ion channel 139 339 4.7E-47 T 11-11-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 SHALO_RS07580 b2ae06370dd32a414e4665a4063965a8 215 SUPERFAMILY SSF54862 30 211 1.19E-23 T 11-11-2016 SHALO_RS07580 b2ae06370dd32a414e4665a4063965a8 215 Pfam PF12800 4Fe-4S binding domain 127 140 0.23 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_RS07580 b2ae06370dd32a414e4665a4063965a8 215 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 50 61 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_RS07580 b2ae06370dd32a414e4665a4063965a8 215 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 129 140 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_RS07580 b2ae06370dd32a414e4665a4063965a8 215 Pfam PF12838 4Fe-4S dicluster domain 49 107 1.3E-8 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_RS07580 b2ae06370dd32a414e4665a4063965a8 215 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 183 194 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_RS07580 b2ae06370dd32a414e4665a4063965a8 215 Gene3D G3DSA:3.30.70.20 99 128 4.6E-8 T 11-11-2016 SHALO_RS07580 b2ae06370dd32a414e4665a4063965a8 215 Pfam PF00037 4Fe-4S binding domain 176 198 1.0E-5 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_RS07580 b2ae06370dd32a414e4665a4063965a8 215 Gene3D G3DSA:3.30.70.20 129 211 8.2E-12 T 11-11-2016 SHALO_RS07580 b2ae06370dd32a414e4665a4063965a8 215 Gene3D G3DSA:3.30.70.20 48 98 5.0E-10 T 11-11-2016 SHALO_RS07150 0b1e5a9e421b7541cd691b8c26d51660 322 SUPERFAMILY SSF51735 6 146 1.06E-47 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS07150 0b1e5a9e421b7541cd691b8c26d51660 322 SUPERFAMILY SSF56327 146 308 1.73E-48 T 11-11-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 SHALO_RS07150 0b1e5a9e421b7541cd691b8c26d51660 322 Hamap MF_00487 Malate dehydrogenase [mdh]. 5 309 42.155 T 11-11-2016 IPR011275 Malate dehydrogenase, type 3 GO:0016616|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 SHALO_RS07150 0b1e5a9e421b7541cd691b8c26d51660 322 Gene3D G3DSA:3.90.110.10 147 309 1.4E-50 T 11-11-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 SHALO_RS07150 0b1e5a9e421b7541cd691b8c26d51660 322 PRINTS PR00086 L-lactate dehydrogenase signature 31 55 3.3E-23 T 11-11-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SHALO_RS07150 0b1e5a9e421b7541cd691b8c26d51660 322 PRINTS PR00086 L-lactate dehydrogenase signature 119 139 3.3E-23 T 11-11-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SHALO_RS07150 0b1e5a9e421b7541cd691b8c26d51660 322 PRINTS PR00086 L-lactate dehydrogenase signature 6 30 3.3E-23 T 11-11-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SHALO_RS07150 0b1e5a9e421b7541cd691b8c26d51660 322 PRINTS PR00086 L-lactate dehydrogenase signature 143 161 3.3E-23 T 11-11-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SHALO_RS07150 0b1e5a9e421b7541cd691b8c26d51660 322 PRINTS PR00086 L-lactate dehydrogenase signature 173 186 3.3E-23 T 11-11-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SHALO_RS07150 0b1e5a9e421b7541cd691b8c26d51660 322 PIRSF PIRSF000102 2 315 1.9E-106 T 11-11-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SHALO_RS07150 0b1e5a9e421b7541cd691b8c26d51660 322 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 150 307 5.2E-28 T 11-11-2016 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 SHALO_RS07150 0b1e5a9e421b7541cd691b8c26d51660 322 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 6 145 7.3E-41 T 11-11-2016 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 SHALO_RS07150 0b1e5a9e421b7541cd691b8c26d51660 322 TIGRFAM TIGR01763 MalateDH_bact: malate dehydrogenase, NAD-dependent 5 308 2.4E-116 T 11-11-2016 IPR011275 Malate dehydrogenase, type 3 GO:0016616|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 SHALO_RS07150 0b1e5a9e421b7541cd691b8c26d51660 322 Gene3D G3DSA:3.40.50.720 3 146 2.5E-50 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS07925 5383175ca6817fcc47c84f9aa7c09a3b 343 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 40 253 4.2E-31 T 11-11-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SHALO_RS07925 5383175ca6817fcc47c84f9aa7c09a3b 343 Gene3D G3DSA:3.40.190.10 130 226 3.3E-16 T 11-11-2016 SHALO_RS07925 5383175ca6817fcc47c84f9aa7c09a3b 343 SUPERFAMILY SSF53850 30 256 1.3E-46 T 11-11-2016 SHALO_RS07925 5383175ca6817fcc47c84f9aa7c09a3b 343 SMART SM00062 39 268 5.5E-51 T 11-11-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SHALO_RS07925 5383175ca6817fcc47c84f9aa7c09a3b 343 Gene3D G3DSA:3.40.190.10 36 129 3.0E-16 T 11-11-2016 SHALO_RS07925 5383175ca6817fcc47c84f9aa7c09a3b 343 Gene3D G3DSA:3.40.190.10 228 249 3.0E-16 T 11-11-2016 SHALO_RS07925 5383175ca6817fcc47c84f9aa7c09a3b 343 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 62 75 - T 11-11-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 SHALO_RS06350 067c0adf2aa17f4c752cde5494a2656b 188 SUPERFAMILY SSF46626 114 181 1.89E-6 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS06350 067c0adf2aa17f4c752cde5494a2656b 188 Gene3D G3DSA:1.10.760.10 124 184 3.8E-5 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS15115 993af44b533f8c845c16abe967fad1c8 363 Pfam PF12832 MFS_1 like family 5 340 7.4E-35 T 11-11-2016 IPR024989 Major facilitator superfamily associated domain SHALO_RS15115 993af44b533f8c845c16abe967fad1c8 363 PIRSF PIRSF004925 1 363 9.3E-67 T 11-11-2016 IPR026032 Probable 3-phenylpropionic acid transporter SHALO_RS15115 993af44b533f8c845c16abe967fad1c8 363 Gene3D G3DSA:1.20.1250.20 7 175 1.5E-10 T 11-11-2016 SHALO_RS15115 993af44b533f8c845c16abe967fad1c8 363 Gene3D G3DSA:1.20.1250.20 194 359 2.2E-16 T 11-11-2016 SHALO_RS15115 993af44b533f8c845c16abe967fad1c8 363 SUPERFAMILY SSF103473 3 361 9.42E-28 T 11-11-2016 IPR020846 Major facilitator superfamily domain SHALO_RS11870 a86461a3ffa006fd1983e74c79a25002 418 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 112 409 1.4E-85 T 11-11-2016 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 SHALO_RS11870 a86461a3ffa006fd1983e74c79a25002 418 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 201 403 1.9E-17 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHALO_RS11870 a86461a3ffa006fd1983e74c79a25002 418 Pfam PF12501 Phosphate ATP-binding cassette transporter 17 61 2.8E-8 T 11-11-2016 IPR022182 ABC transporter phosphate permease PstC, N-terminal domain GO:0006817 SHALO_RS11870 a86461a3ffa006fd1983e74c79a25002 418 SUPERFAMILY SSF161098 175 401 1.83E-29 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHALO_RS11870 a86461a3ffa006fd1983e74c79a25002 418 Gene3D G3DSA:1.10.3720.10 122 414 7.0E-36 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHALO_RS04280 f3f05d0ff97c34fde316cfde3d074ac7 718 SUPERFAMILY SSF109604 27 205 2.35E-57 T 11-11-2016 SHALO_RS04280 f3f05d0ff97c34fde316cfde3d074ac7 718 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 37 689 1.0E-198 T 11-11-2016 IPR004811 RelA/SpoT family GO:0015969 SHALO_RS04280 f3f05d0ff97c34fde316cfde3d074ac7 718 SMART SM00471 49 169 3.0E-8 T 11-11-2016 IPR003607 HD/PDEase domain SHALO_RS04280 f3f05d0ff97c34fde316cfde3d074ac7 718 Gene3D G3DSA:3.30.460.10 208 342 9.0E-39 T 11-11-2016 SHALO_RS04280 f3f05d0ff97c34fde316cfde3d074ac7 718 Gene3D G3DSA:3.10.20.30 400 461 3.9E-13 T 11-11-2016 IPR012675 Beta-grasp domain SHALO_RS04280 f3f05d0ff97c34fde316cfde3d074ac7 718 SUPERFAMILY SSF81301 208 369 1.96E-51 T 11-11-2016 SHALO_RS04280 f3f05d0ff97c34fde316cfde3d074ac7 718 Gene3D G3DSA:3.30.70.260 635 708 2.4E-5 T 11-11-2016 SHALO_RS04280 f3f05d0ff97c34fde316cfde3d074ac7 718 Pfam PF02824 TGS domain 400 459 4.8E-17 T 11-11-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 SHALO_RS04280 f3f05d0ff97c34fde316cfde3d074ac7 718 Pfam PF13328 HD domain 34 191 1.1E-40 T 11-11-2016 IPR003607 HD/PDEase domain SHALO_RS04280 f3f05d0ff97c34fde316cfde3d074ac7 718 SUPERFAMILY SSF55021 634 709 2.68E-6 T 11-11-2016 SHALO_RS04280 f3f05d0ff97c34fde316cfde3d074ac7 718 SMART SM00954 254 363 1.8E-58 T 11-11-2016 IPR007685 RelA/SpoT GO:0015969 SHALO_RS04280 f3f05d0ff97c34fde316cfde3d074ac7 718 SUPERFAMILY SSF81271 387 460 9.81E-18 T 11-11-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 SHALO_RS04280 f3f05d0ff97c34fde316cfde3d074ac7 718 Pfam PF04607 Region found in RelA / SpoT proteins 254 362 7.2E-34 T 11-11-2016 IPR007685 RelA/SpoT GO:0015969 SHALO_RS02545 62c5801752badf1b3c6fa5509fe8664f 504 Gene3D G3DSA:3.40.50.740 405 499 1.6E-4 T 11-11-2016 SHALO_RS02545 62c5801752badf1b3c6fa5509fe8664f 504 SUPERFAMILY SSF54292 1 123 1.52E-28 T 11-11-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 SHALO_RS02545 62c5801752badf1b3c6fa5509fe8664f 504 Gene3D G3DSA:2.20.25.90 225 270 3.4E-5 T 11-11-2016 SHALO_RS02545 62c5801752badf1b3c6fa5509fe8664f 504 SUPERFAMILY SSF54862 80 210 2.34E-28 T 11-11-2016 SHALO_RS02545 62c5801752badf1b3c6fa5509fe8664f 504 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 84 122 2.6E-15 T 11-11-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS02545 62c5801752badf1b3c6fa5509fe8664f 504 Gene3D G3DSA:3.10.20.30 6 56 1.6E-4 T 11-11-2016 IPR012675 Beta-grasp domain SHALO_RS02545 62c5801752badf1b3c6fa5509fe8664f 504 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 31 48 - T 11-11-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS02545 62c5801752badf1b3c6fa5509fe8664f 504 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 3 75 4.7E-13 T 11-11-2016 SHALO_RS02545 62c5801752badf1b3c6fa5509fe8664f 504 SMART SM00929 83 123 4.6E-16 T 11-11-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS02545 62c5801752badf1b3c6fa5509fe8664f 504 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 146 156 - T 11-11-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS02545 62c5801752badf1b3c6fa5509fe8664f 504 SUPERFAMILY SSF53706 214 334 1.83E-14 T 11-11-2016 SHALO_RS02545 62c5801752badf1b3c6fa5509fe8664f 504 Gene3D G3DSA:3.30.70.20 194 224 5.6E-5 T 11-11-2016 SHALO_RS02545 62c5801752badf1b3c6fa5509fe8664f 504 Gene3D G3DSA:3.30.70.20 140 153 5.6E-5 T 11-11-2016 SHALO_RS06935 ca29459c8fcd9aef9680f34b1d551c93 476 Pfam PF02637 GatB domain 328 474 2.2E-45 T 11-11-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 SHALO_RS06935 ca29459c8fcd9aef9680f34b1d551c93 476 SUPERFAMILY SSF55931 4 292 1.18E-120 T 11-11-2016 SHALO_RS06935 ca29459c8fcd9aef9680f34b1d551c93 476 SMART SM00845 328 474 2.1E-67 T 11-11-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 SHALO_RS06935 ca29459c8fcd9aef9680f34b1d551c93 476 SUPERFAMILY SSF89095 297 400 3.79E-28 T 11-11-2016 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 SHALO_RS06935 ca29459c8fcd9aef9680f34b1d551c93 476 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 142 156 - T 11-11-2016 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 SHALO_RS06935 ca29459c8fcd9aef9680f34b1d551c93 476 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 2 475 38.045 T 11-11-2016 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 SHALO_RS06935 ca29459c8fcd9aef9680f34b1d551c93 476 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 1 474 4.0E-185 T 11-11-2016 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 SHALO_RS06935 ca29459c8fcd9aef9680f34b1d551c93 476 Pfam PF02934 GatB/GatE catalytic domain 5 289 4.6E-114 T 11-11-2016 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 SHALO_RS09475 68225d911ff7e3cb71d4ece59baae9bb 438 Pfam PF00909 Ammonium Transporter Family 40 435 1.6E-122 T 11-11-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 SHALO_RS09475 68225d911ff7e3cb71d4ece59baae9bb 438 SUPERFAMILY SSF111352 34 411 5.23E-124 T 11-11-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 SHALO_RS09475 68225d911ff7e3cb71d4ece59baae9bb 438 Gene3D G3DSA:1.10.3430.10 33 411 1.7E-134 T 11-11-2016 IPR029020 Ammonium/urea transporter SHALO_RS09475 68225d911ff7e3cb71d4ece59baae9bb 438 PRINTS PR00342 Rhesus blood group protein signature 135 151 6.8E-8 T 11-11-2016 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 SHALO_RS09475 68225d911ff7e3cb71d4ece59baae9bb 438 PRINTS PR00342 Rhesus blood group protein signature 229 247 6.8E-8 T 11-11-2016 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 SHALO_RS09475 68225d911ff7e3cb71d4ece59baae9bb 438 PRINTS PR00342 Rhesus blood group protein signature 315 333 6.8E-8 T 11-11-2016 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 SHALO_RS09475 68225d911ff7e3cb71d4ece59baae9bb 438 ProSitePatterns PS01219 Ammonium transporters signature. 191 216 - T 11-11-2016 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 SHALO_RS09475 68225d911ff7e3cb71d4ece59baae9bb 438 TIGRFAM TIGR00836 amt: ammonium transporter 38 434 8.5E-137 T 11-11-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 SHALO_RS10505 1a783918583f77d03be8eae2229c6b83 98 TIGRFAM TIGR01608 citD: citrate lyase acyl carrier protein 7 95 7.9E-29 T 11-11-2016 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 SHALO_RS10505 1a783918583f77d03be8eae2229c6b83 98 Hamap MF_00805 Citrate lyase acyl carrier protein [citD]. 2 98 21.818 T 11-11-2016 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 SHALO_RS10505 1a783918583f77d03be8eae2229c6b83 98 ProDom PD015389 LYASE CITRATE ACYL CARRIER GAMMA CHAIN CITD PRECURSOR SIGNAL DIRECT 6 81 4.0E-10 T 11-11-2016 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 SHALO_RS10505 1a783918583f77d03be8eae2229c6b83 98 Pfam PF06857 Malonate decarboxylase delta subunit (MdcD) 6 87 3.0E-28 T 11-11-2016 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein SHALO_RS10505 1a783918583f77d03be8eae2229c6b83 98 PIRSF PIRSF002736 2 98 4.3E-32 T 11-11-2016 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 SHALO_RS14680 543baef3f8c4b2c38a804670ff1a1e31 107 Pfam PF13522 Glutamine amidotransferase domain 28 106 5.7E-16 T 11-11-2016 SHALO_RS14680 543baef3f8c4b2c38a804670ff1a1e31 107 SUPERFAMILY SSF56235 1 106 7.12E-23 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SHALO_RS14680 543baef3f8c4b2c38a804670ff1a1e31 107 Gene3D G3DSA:3.60.20.10 1 106 7.6E-28 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SHALO_RS12125 ba9e13e38a39468efcb44639f1d109bc 72 Gene3D G3DSA:2.40.50.140 1 72 8.0E-36 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold SHALO_RS12125 ba9e13e38a39468efcb44639f1d109bc 72 SUPERFAMILY SSF50249 1 71 9.55E-27 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold SHALO_RS12125 ba9e13e38a39468efcb44639f1d109bc 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 1.4E-26 T 11-11-2016 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 SHALO_RS12125 ba9e13e38a39468efcb44639f1d109bc 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 71 5.2E-33 T 11-11-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 SHALO_RS12125 ba9e13e38a39468efcb44639f1d109bc 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 25.322 T 11-11-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 SHALO_RS05830 cc00c6396bb5b61451b61056b5027796 724 SUPERFAMILY SSF55874 568 717 3.14E-30 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS05830 cc00c6396bb5b61451b61056b5027796 724 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 611 718 9.7E-17 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS05830 cc00c6396bb5b61451b61056b5027796 724 Pfam PF02743 Cache domain 48 359 2.3E-12 T 11-11-2016 IPR033479 Double Cache domain 1 SHALO_RS05830 cc00c6396bb5b61451b61056b5027796 724 Gene3D G3DSA:3.30.565.10 571 717 4.0E-31 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS05830 cc00c6396bb5b61451b61056b5027796 724 Gene3D G3DSA:3.30.450.20 327 375 7.4E-17 T 11-11-2016 SHALO_RS05830 cc00c6396bb5b61451b61056b5027796 724 Gene3D G3DSA:3.30.450.20 212 293 7.4E-17 T 11-11-2016 SHALO_RS05830 cc00c6396bb5b61451b61056b5027796 724 SUPERFAMILY SSF47384 484 569 6.87E-6 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS05830 cc00c6396bb5b61451b61056b5027796 724 SMART SM00387 609 721 1.6E-23 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS05830 cc00c6396bb5b61451b61056b5027796 724 PRINTS PR00344 Bacterial sensor protein C-terminal signature 681 699 1.4E-7 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS05830 cc00c6396bb5b61451b61056b5027796 724 PRINTS PR00344 Bacterial sensor protein C-terminal signature 650 664 1.4E-7 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS05830 cc00c6396bb5b61451b61056b5027796 724 PRINTS PR00344 Bacterial sensor protein C-terminal signature 668 678 1.4E-7 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS04055 7141562e7d91d26b11843e4196e155a5 445 Pfam PF02321 Outer membrane efflux protein 261 439 1.2E-21 T 11-11-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SHALO_RS04055 7141562e7d91d26b11843e4196e155a5 445 Pfam PF02321 Outer membrane efflux protein 22 232 5.0E-9 T 11-11-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SHALO_RS04055 7141562e7d91d26b11843e4196e155a5 445 Gene3D G3DSA:1.20.1600.10 20 439 2.1E-41 T 11-11-2016 SHALO_RS04055 7141562e7d91d26b11843e4196e155a5 445 SUPERFAMILY SSF56954 109 439 1.06E-51 T 11-11-2016 SHALO_RS04055 7141562e7d91d26b11843e4196e155a5 445 SUPERFAMILY SSF56954 3 79 1.06E-51 T 11-11-2016 SHALO_RS02735 b50f917d4b2eb2fde425457325bd9c69 218 SMART SM00100 3 125 4.0E-5 T 11-11-2016 IPR000595 Cyclic nucleotide-binding domain SHALO_RS02735 b50f917d4b2eb2fde425457325bd9c69 218 Pfam PF13545 Crp-like helix-turn-helix domain 144 213 8.8E-12 T 11-11-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 SHALO_RS02735 b50f917d4b2eb2fde425457325bd9c69 218 SMART SM00419 155 207 0.0024 T 11-11-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 SHALO_RS02735 b50f917d4b2eb2fde425457325bd9c69 218 Gene3D G3DSA:2.60.120.10 7 137 1.1E-24 T 11-11-2016 IPR014710 RmlC-like jelly roll fold SHALO_RS02735 b50f917d4b2eb2fde425457325bd9c69 218 Gene3D G3DSA:1.10.10.10 139 215 5.1E-15 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS02735 b50f917d4b2eb2fde425457325bd9c69 218 SUPERFAMILY SSF46785 141 215 2.67E-13 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS02735 b50f917d4b2eb2fde425457325bd9c69 218 SUPERFAMILY SSF51206 4 137 7.86E-26 T 11-11-2016 IPR018490 Cyclic nucleotide-binding-like SHALO_RS02735 b50f917d4b2eb2fde425457325bd9c69 218 Pfam PF00027 Cyclic nucleotide-binding domain 22 108 1.8E-13 T 11-11-2016 IPR000595 Cyclic nucleotide-binding domain SHALO_RS06025 3a6d5c49c5b5a239d8fc6b214fe05255 476 SUPERFAMILY SSF102114 34 266 5.89E-34 T 11-11-2016 SHALO_RS06025 3a6d5c49c5b5a239d8fc6b214fe05255 476 Gene3D G3DSA:3.30.420.130 358 463 2.6E-24 T 11-11-2016 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis SHALO_RS06025 3a6d5c49c5b5a239d8fc6b214fe05255 476 Pfam PF04055 Radical SAM superfamily 44 221 1.0E-24 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SHALO_RS06025 3a6d5c49c5b5a239d8fc6b214fe05255 476 Gene3D G3DSA:3.20.20.70 34 324 3.8E-41 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_RS06025 3a6d5c49c5b5a239d8fc6b214fe05255 476 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 44 55 - T 11-11-2016 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|Reactome: R-HSA-947581 SHALO_RS06025 3a6d5c49c5b5a239d8fc6b214fe05255 476 SMART SM00729 38 267 0.0082 T 11-11-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 SHALO_RS06025 3a6d5c49c5b5a239d8fc6b214fe05255 476 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 371 461 1.2E-11 T 11-11-2016 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis SHALO_RS06025 3a6d5c49c5b5a239d8fc6b214fe05255 476 TIGRFAM TIGR01290 nifB: nitrogenase cofactor biosynthesis protein NifB 18 468 3.0E-171 T 11-11-2016 IPR005980 Nitrogenase cofactor biosynthesis protein NifB GO:0009108|GO:0009399 SHALO_RS06025 3a6d5c49c5b5a239d8fc6b214fe05255 476 SUPERFAMILY SSF53146 359 461 4.06E-21 T 11-11-2016 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis SHALO_RS06900 5510b489ccf9097349db44b1af540e0c 272 SUPERFAMILY SSF161098 63 250 1.98E-14 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHALO_RS06900 5510b489ccf9097349db44b1af540e0c 272 Gene3D G3DSA:1.10.3720.10 13 266 8.1E-6 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHALO_RS06900 5510b489ccf9097349db44b1af540e0c 272 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 262 1.1E-18 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHALO_RS04375 6f01f867271ba96661da8e55c9de27bf 154 Pfam PF03968 OstA-like protein 21 131 6.4E-20 T 11-11-2016 IPR005653 Organic solvent tolerance-like, N-terminal SHALO_RS04375 6f01f867271ba96661da8e55c9de27bf 154 Gene3D G3DSA:2.60.450.10 18 146 9.8E-25 T 11-11-2016 SHALO_RS04375 6f01f867271ba96661da8e55c9de27bf 154 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 18 148 6.2E-22 T 11-11-2016 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 SHALO_RS13100 fd6f76c0e100f87293689258d953c3ff 359 Gene3D G3DSA:1.10.3290.10 25 280 7.9E-51 T 11-11-2016 IPR003812 Fido domain SHALO_RS13100 fd6f76c0e100f87293689258d953c3ff 359 SUPERFAMILY SSF46785 273 346 2.67E-9 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS13100 fd6f76c0e100f87293689258d953c3ff 359 Pfam PF08279 HTH domain 294 335 7.4E-6 T 11-11-2016 IPR013196 Helix-turn-helix, type 11 SHALO_RS13100 fd6f76c0e100f87293689258d953c3ff 359 Gene3D G3DSA:1.10.10.10 283 345 2.4E-7 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS13100 fd6f76c0e100f87293689258d953c3ff 359 Pfam PF02661 Fic/DOC family 113 210 1.1E-20 T 11-11-2016 IPR003812 Fido domain SHALO_RS13100 fd6f76c0e100f87293689258d953c3ff 359 Pfam PF13784 Fic/DOC family N-terminal 22 101 2.6E-26 T 11-11-2016 IPR025758 Fic/DOC N-terminal SHALO_RS13100 fd6f76c0e100f87293689258d953c3ff 359 SUPERFAMILY SSF140931 87 276 8.63E-34 T 11-11-2016 IPR003812 Fido domain SHALO_RS13100 fd6f76c0e100f87293689258d953c3ff 359 PIRSF PIRSF038925 1 357 3.0E-117 T 11-11-2016 IPR026287 Adenosine monophosphate-protein transferase SHALO_RS05780 151d8db7b81d5d7ddc0f5d60d40887e8 601 SMART SM00382 381 566 1.0E-13 T 11-11-2016 IPR003593 AAA+ ATPase domain SHALO_RS05780 151d8db7b81d5d7ddc0f5d60d40887e8 601 Pfam PF00664 ABC transporter transmembrane region 57 308 4.5E-21 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SHALO_RS05780 151d8db7b81d5d7ddc0f5d60d40887e8 601 ProSitePatterns PS00211 ABC transporters family signature. 492 506 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHALO_RS05780 151d8db7b81d5d7ddc0f5d60d40887e8 601 Gene3D G3DSA:3.40.50.300 356 598 6.8E-77 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS05780 151d8db7b81d5d7ddc0f5d60d40887e8 601 SUPERFAMILY SSF90123 8 336 1.44E-49 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SHALO_RS05780 151d8db7b81d5d7ddc0f5d60d40887e8 601 Pfam PF00005 ABC transporter 372 520 6.0E-30 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_RS05780 151d8db7b81d5d7ddc0f5d60d40887e8 601 SUPERFAMILY SSF52540 349 587 4.99E-81 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS05780 151d8db7b81d5d7ddc0f5d60d40887e8 601 Gene3D G3DSA:1.20.1560.10 8 335 2.3E-45 T 11-11-2016 SHALO_RS03975 9e79483b3b77877ae6a75ac774d599a7 177 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 27 159 5.1E-24 T 11-11-2016 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component SHALO_RS08560 9a4e46eff344b7295c7563a3f6a6f029 198 Pfam PF00753 Metallo-beta-lactamase superfamily 10 177 1.6E-24 T 11-11-2016 IPR001279 Metallo-beta-lactamase SHALO_RS08560 9a4e46eff344b7295c7563a3f6a6f029 198 SUPERFAMILY SSF56281 7 182 1.31E-44 T 11-11-2016 IPR001279 Metallo-beta-lactamase SHALO_RS08560 9a4e46eff344b7295c7563a3f6a6f029 198 SMART SM00849 12 177 8.1E-34 T 11-11-2016 IPR001279 Metallo-beta-lactamase SHALO_RS08560 9a4e46eff344b7295c7563a3f6a6f029 198 Gene3D G3DSA:3.60.15.10 4 181 4.4E-41 T 11-11-2016 IPR001279 Metallo-beta-lactamase SHALO_RS14825 4317a11efbc8016f7454558ef91c062b 381 Gene3D G3DSA:3.90.1510.10 42 274 1.1E-88 T 11-11-2016 IPR018193 Glycerate kinase, flavodoxin-like domain GO:0008887|GO:0031388 SHALO_RS14825 4317a11efbc8016f7454558ef91c062b 381 Pfam PF02595 Glycerate kinase family 3 374 2.9E-136 T 11-11-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 SHALO_RS14825 4317a11efbc8016f7454558ef91c062b 381 PIRSF PIRSF006078 1 378 3.0E-133 T 11-11-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 SHALO_RS14825 4317a11efbc8016f7454558ef91c062b 381 SUPERFAMILY SSF110738 1 375 6.54E-117 T 11-11-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 SHALO_RS14825 4317a11efbc8016f7454558ef91c062b 381 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 3 375 2.5E-139 T 11-11-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 SHALO_RS12970 94777eed215eb3d780beca429e0df499 441 Pfam PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component 80 428 1.3E-82 T 11-11-2016 IPR010327 FldB/FldC dehydratase alpha/beta subunit SHALO_RS12235 13c53374dfb145487568aaf3ed736fcb 103 Pfam PF00338 Ribosomal protein S10p/S20e 5 98 1.9E-35 T 11-11-2016 IPR027486 Ribosomal protein S10 domain SHALO_RS12235 13c53374dfb145487568aaf3ed736fcb 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 2 99 5.0E-43 T 11-11-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_RS12235 13c53374dfb145487568aaf3ed736fcb 103 Gene3D G3DSA:3.30.70.600 2 99 5.9E-43 T 11-11-2016 IPR027486 Ribosomal protein S10 domain SHALO_RS12235 13c53374dfb145487568aaf3ed736fcb 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 27 42 - T 11-11-2016 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_RS12235 13c53374dfb145487568aaf3ed736fcb 103 SMART SM01403 5 99 3.4E-51 T 11-11-2016 IPR027486 Ribosomal protein S10 domain SHALO_RS12235 13c53374dfb145487568aaf3ed736fcb 103 PRINTS PR00971 Ribosomal protein S10 family signature 59 73 3.6E-20 T 11-11-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_RS12235 13c53374dfb145487568aaf3ed736fcb 103 PRINTS PR00971 Ribosomal protein S10 family signature 3 16 3.6E-20 T 11-11-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_RS12235 13c53374dfb145487568aaf3ed736fcb 103 PRINTS PR00971 Ribosomal protein S10 family signature 38 53 3.6E-20 T 11-11-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_RS12235 13c53374dfb145487568aaf3ed736fcb 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 1 100 26.304 T 11-11-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_RS12235 13c53374dfb145487568aaf3ed736fcb 103 SUPERFAMILY SSF54999 3 98 7.06E-38 T 11-11-2016 IPR027486 Ribosomal protein S10 domain SHALO_RS14865 792d903e0e88078ec7745d36d16482c2 421 SUPERFAMILY SSF53732 1 420 4.19E-140 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 SHALO_RS14865 792d903e0e88078ec7745d36d16482c2 421 Gene3D G3DSA:3.40.1060.10 149 272 5.2E-29 T 11-11-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 SHALO_RS14865 792d903e0e88078ec7745d36d16482c2 421 TIGRFAM TIGR02083 LEU2: 3-isopropylmalate dehydratase, large subunit 4 420 3.8E-189 T 11-11-2016 IPR011823 3-isopropylmalate dehydratase, large subunit, bacteria GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 SHALO_RS14865 792d903e0e88078ec7745d36d16482c2 421 ProSitePatterns PS00450 Aconitase family signature 1. 294 310 - T 11-11-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 SHALO_RS14865 792d903e0e88078ec7745d36d16482c2 421 Gene3D G3DSA:3.30.499.10 274 420 3.7E-53 T 11-11-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 SHALO_RS14865 792d903e0e88078ec7745d36d16482c2 421 Gene3D G3DSA:3.30.499.10 1 148 1.8E-37 T 11-11-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 SHALO_RS14865 792d903e0e88078ec7745d36d16482c2 421 Pfam PF00330 Aconitase family (aconitate hydratase) 7 413 2.5E-91 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 SHALO_RS14865 792d903e0e88078ec7745d36d16482c2 421 PRINTS PR00415 Aconitase family signature 189 202 1.1E-22 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 SHALO_RS14865 792d903e0e88078ec7745d36d16482c2 421 PRINTS PR00415 Aconitase family signature 203 216 1.1E-22 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 SHALO_RS14865 792d903e0e88078ec7745d36d16482c2 421 PRINTS PR00415 Aconitase family signature 298 309 1.1E-22 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 SHALO_RS14865 792d903e0e88078ec7745d36d16482c2 421 PRINTS PR00415 Aconitase family signature 354 367 1.1E-22 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 SHALO_RS14865 792d903e0e88078ec7745d36d16482c2 421 PRINTS PR00415 Aconitase family signature 113 126 1.1E-22 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 SHALO_RS14865 792d903e0e88078ec7745d36d16482c2 421 PRINTS PR00415 Aconitase family signature 127 142 1.1E-22 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 SHALO_RS14865 792d903e0e88078ec7745d36d16482c2 421 TIGRFAM TIGR01343 hacA_fam: homoaconitate hydratase family protein 4 419 1.7E-171 T 11-11-2016 IPR006251 Homoaconitase/3-isopropylmalate dehydratase, large subunit GO:0008652|GO:0016836|GO:0051539 KEGG: 00290+4.2.1.33 SHALO_RS14865 792d903e0e88078ec7745d36d16482c2 421 Hamap MF_01027 3-isopropylmalate dehydratase large subunit [leuC]. 3 421 47.25 T 11-11-2016 IPR011826 Homoaconitase/3-isopropylmalate dehydratase, large subunit, prokaryotic GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 SHALO_RS14865 792d903e0e88078ec7745d36d16482c2 421 TIGRFAM TIGR02086 IPMI_arch: 3-isopropylmalate dehydratase, large subunit 3 419 2.4E-156 T 11-11-2016 IPR011826 Homoaconitase/3-isopropylmalate dehydratase, large subunit, prokaryotic GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 SHALO_RS13500 edc917037e12e5584694bfb69580f9f3 224 SUPERFAMILY SSF52172 11 139 1.57E-26 T 11-11-2016 IPR011006 CheY-like superfamily SHALO_RS13500 edc917037e12e5584694bfb69580f9f3 224 Pfam PF05732 Firmicute plasmid replication protein (RepL) 142 212 7.9E-7 T 11-11-2016 IPR008813 Plasmid replication protein, RepL GO:0006260|GO:0006276 SHALO_RS13500 edc917037e12e5584694bfb69580f9f3 224 Gene3D G3DSA:1.10.10.10 174 211 3.5E-6 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS13500 edc917037e12e5584694bfb69580f9f3 224 SMART SM00448 12 124 3.2E-17 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS13500 edc917037e12e5584694bfb69580f9f3 224 Pfam PF00072 Response regulator receiver domain 14 124 9.0E-18 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS13500 edc917037e12e5584694bfb69580f9f3 224 Gene3D G3DSA:3.40.50.2300 13 130 7.7E-24 T 11-11-2016 SHALO_RS09710 e7f2fc3e16f6c9de63f77ed7da97140b 223 Pfam PF00072 Response regulator receiver domain 5 115 2.6E-23 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS09710 e7f2fc3e16f6c9de63f77ed7da97140b 223 SUPERFAMILY SSF46894 124 222 1.59E-28 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SHALO_RS09710 e7f2fc3e16f6c9de63f77ed7da97140b 223 SUPERFAMILY SSF52172 3 127 2.56E-33 T 11-11-2016 IPR011006 CheY-like superfamily SHALO_RS09710 e7f2fc3e16f6c9de63f77ed7da97140b 223 Gene3D G3DSA:3.40.50.2300 3 125 1.6E-33 T 11-11-2016 SHALO_RS09710 e7f2fc3e16f6c9de63f77ed7da97140b 223 Gene3D G3DSA:1.10.10.10 126 222 4.1E-32 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS09710 e7f2fc3e16f6c9de63f77ed7da97140b 223 SMART SM00448 3 115 1.4E-32 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS09710 e7f2fc3e16f6c9de63f77ed7da97140b 223 SMART SM00862 145 221 5.9E-24 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS09710 e7f2fc3e16f6c9de63f77ed7da97140b 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 221 1.6E-23 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS01190 90b04fb87629bc9d154b962e7bda6b88 1085 Gene3D G3DSA:3.40.50.20 3 108 4.5E-43 T 11-11-2016 IPR016185 Pre-ATP-grasp domain SHALO_RS01190 90b04fb87629bc9d154b962e7bda6b88 1085 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 418 541 9.6E-38 T 11-11-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 SHALO_RS01190 90b04fb87629bc9d154b962e7bda6b88 1085 Gene3D G3DSA:3.30.1490.20 142 199 5.9E-20 T 11-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SHALO_RS01190 90b04fb87629bc9d154b962e7bda6b88 1085 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 708 722 - T 11-11-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SHALO_RS01190 90b04fb87629bc9d154b962e7bda6b88 1085 Pfam PF02142 MGS-like domain 972 1054 3.2E-20 T 11-11-2016 IPR011607 Methylglyoxal synthase-like domain SHALO_RS01190 90b04fb87629bc9d154b962e7bda6b88 1085 SUPERFAMILY SSF56059 126 397 6.54E-102 T 11-11-2016 SHALO_RS01190 90b04fb87629bc9d154b962e7bda6b88 1085 Gene3D G3DSA:1.10.1030.10 396 532 1.4E-45 T 11-11-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 SHALO_RS01190 90b04fb87629bc9d154b962e7bda6b88 1085 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1075 12.815 T 11-11-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 SHALO_RS01190 90b04fb87629bc9d154b962e7bda6b88 1085 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1065 0.0 T 11-11-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 SHALO_RS01190 90b04fb87629bc9d154b962e7bda6b88 1085 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 295 302 - T 11-11-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SHALO_RS01190 90b04fb87629bc9d154b962e7bda6b88 1085 SUPERFAMILY SSF56059 672 946 1.63E-102 T 11-11-2016 SHALO_RS01190 90b04fb87629bc9d154b962e7bda6b88 1085 SMART SM01096 415 542 4.5E-60 T 11-11-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 SHALO_RS01190 90b04fb87629bc9d154b962e7bda6b88 1085 Gene3D G3DSA:3.30.470.20 200 395 3.1E-72 T 11-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SHALO_RS01190 90b04fb87629bc9d154b962e7bda6b88 1085 Gene3D G3DSA:3.30.470.20 744 946 5.5E-74 T 11-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SHALO_RS01190 90b04fb87629bc9d154b962e7bda6b88 1085 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 837 844 - T 11-11-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SHALO_RS01190 90b04fb87629bc9d154b962e7bda6b88 1085 SMART SM00851 968 1054 2.3E-30 T 11-11-2016 IPR011607 Methylglyoxal synthase-like domain SHALO_RS01190 90b04fb87629bc9d154b962e7bda6b88 1085 SUPERFAMILY SSF52335 950 1084 1.7E-33 T 11-11-2016 IPR011607 Methylglyoxal synthase-like domain SHALO_RS01190 90b04fb87629bc9d154b962e7bda6b88 1085 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 166 178 2.9E-63 T 11-11-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 SHALO_RS01190 90b04fb87629bc9d154b962e7bda6b88 1085 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 202 221 2.9E-63 T 11-11-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 SHALO_RS01190 90b04fb87629bc9d154b962e7bda6b88 1085 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 376 394 2.9E-63 T 11-11-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 SHALO_RS01190 90b04fb87629bc9d154b962e7bda6b88 1085 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 237 254 2.9E-63 T 11-11-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 SHALO_RS01190 90b04fb87629bc9d154b962e7bda6b88 1085 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 295 324 2.9E-63 T 11-11-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 SHALO_RS01190 90b04fb87629bc9d154b962e7bda6b88 1085 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 2.9E-63 T 11-11-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 SHALO_RS01190 90b04fb87629bc9d154b962e7bda6b88 1085 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 2.9E-63 T 11-11-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 SHALO_RS01190 90b04fb87629bc9d154b962e7bda6b88 1085 Gene3D G3DSA:3.30.1490.20 685 743 6.2E-29 T 11-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SHALO_RS01190 90b04fb87629bc9d154b962e7bda6b88 1085 SUPERFAMILY SSF48108 392 543 1.22E-41 T 11-11-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 SHALO_RS01190 90b04fb87629bc9d154b962e7bda6b88 1085 Gene3D G3DSA:3.40.50.20 533 661 5.9E-57 T 11-11-2016 IPR016185 Pre-ATP-grasp domain SHALO_RS01190 90b04fb87629bc9d154b962e7bda6b88 1085 SUPERFAMILY SSF52440 556 674 1.08E-46 T 11-11-2016 IPR016185 Pre-ATP-grasp domain SHALO_RS01190 90b04fb87629bc9d154b962e7bda6b88 1085 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 126 332 1.6E-65 T 11-11-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SHALO_RS01190 90b04fb87629bc9d154b962e7bda6b88 1085 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 672 873 1.9E-37 T 11-11-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SHALO_RS01190 90b04fb87629bc9d154b962e7bda6b88 1085 SUPERFAMILY SSF52440 1 125 4.17E-44 T 11-11-2016 IPR016185 Pre-ATP-grasp domain SHALO_RS01190 90b04fb87629bc9d154b962e7bda6b88 1085 Gene3D G3DSA:3.40.50.1380 951 1083 1.4E-33 T 11-11-2016 IPR011607 Methylglyoxal synthase-like domain SHALO_RS12135 fa036c03a3f3e55845d0da9fee1b7b95 420 SUPERFAMILY SSF103491 4 407 2.48E-108 T 11-11-2016 IPR023201 SecY subunit domain Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 SHALO_RS12135 fa036c03a3f3e55845d0da9fee1b7b95 420 ProSitePatterns PS00755 Protein secY signature 1. 62 81 - T 11-11-2016 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 SHALO_RS12135 fa036c03a3f3e55845d0da9fee1b7b95 420 Hamap MF_01465 Protein translocase subunit SecY [secY]. 1 416 26.877 T 11-11-2016 IPR026593 Protein translocase subunit SecY SHALO_RS12135 fa036c03a3f3e55845d0da9fee1b7b95 420 PRINTS PR00303 Preprotein translocase SecY subunit signature 259 278 1.1E-85 T 11-11-2016 SHALO_RS12135 fa036c03a3f3e55845d0da9fee1b7b95 420 PRINTS PR00303 Preprotein translocase SecY subunit signature 353 371 1.1E-85 T 11-11-2016 SHALO_RS12135 fa036c03a3f3e55845d0da9fee1b7b95 420 PRINTS PR00303 Preprotein translocase SecY subunit signature 101 124 1.1E-85 T 11-11-2016 SHALO_RS12135 fa036c03a3f3e55845d0da9fee1b7b95 420 PRINTS PR00303 Preprotein translocase SecY subunit signature 385 403 1.1E-85 T 11-11-2016 SHALO_RS12135 fa036c03a3f3e55845d0da9fee1b7b95 420 PRINTS PR00303 Preprotein translocase SecY subunit signature 298 320 1.1E-85 T 11-11-2016 SHALO_RS12135 fa036c03a3f3e55845d0da9fee1b7b95 420 PRINTS PR00303 Preprotein translocase SecY subunit signature 9 27 1.1E-85 T 11-11-2016 SHALO_RS12135 fa036c03a3f3e55845d0da9fee1b7b95 420 PRINTS PR00303 Preprotein translocase SecY subunit signature 61 81 1.1E-85 T 11-11-2016 SHALO_RS12135 fa036c03a3f3e55845d0da9fee1b7b95 420 PRINTS PR00303 Preprotein translocase SecY subunit signature 141 166 1.1E-85 T 11-11-2016 SHALO_RS12135 fa036c03a3f3e55845d0da9fee1b7b95 420 PRINTS PR00303 Preprotein translocase SecY subunit signature 167 190 1.1E-85 T 11-11-2016 SHALO_RS12135 fa036c03a3f3e55845d0da9fee1b7b95 420 ProSitePatterns PS00756 Protein secY signature 2. 160 177 - T 11-11-2016 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 SHALO_RS12135 fa036c03a3f3e55845d0da9fee1b7b95 420 Pfam PF00344 SecY translocase 62 400 9.2E-99 T 11-11-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 SHALO_RS12135 fa036c03a3f3e55845d0da9fee1b7b95 420 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 7 411 9.7E-105 T 11-11-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 SHALO_RS12135 fa036c03a3f3e55845d0da9fee1b7b95 420 Gene3D G3DSA:1.10.3370.10 3 415 1.1E-134 T 11-11-2016 IPR023201 SecY subunit domain Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 SHALO_RS12135 fa036c03a3f3e55845d0da9fee1b7b95 420 PIRSF PIRSF004557 1 419 1.3E-119 T 11-11-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 SHALO_RS10855 df0feaa74cb0d8563b97a26fbc4a45d7 133 Gene3D G3DSA:2.40.50.100 64 127 1.1E-13 T 11-11-2016 SHALO_RS10855 df0feaa74cb0d8563b97a26fbc4a45d7 133 Pfam PF03459 TOBE domain 68 125 5.5E-8 T 11-11-2016 IPR005116 Transport-associated OB, type 1 SHALO_RS10855 df0feaa74cb0d8563b97a26fbc4a45d7 133 SUPERFAMILY SSF50331 1 128 2.96E-18 T 11-11-2016 IPR008995 Molybdate/tungstate binding, C-terminal SHALO_RS08210 1bb74ecea0d455555837d6c61bdb3335 395 TIGRFAM TIGR00299 TIGR00299: TIGR00299 family protein 3 383 9.1E-102 T 11-11-2016 IPR002822 Uncharacterised protein family UPF0272 SHALO_RS08210 1bb74ecea0d455555837d6c61bdb3335 395 Pfam PF01969 Protein of unknown function DUF111 4 383 3.8E-141 T 11-11-2016 IPR002822 Uncharacterised protein family UPF0272 SHALO_RS08210 1bb74ecea0d455555837d6c61bdb3335 395 Gene3D G3DSA:3.30.70.1380 245 333 5.0E-25 T 11-11-2016 SHALO_RS08210 1bb74ecea0d455555837d6c61bdb3335 395 Hamap MF_01074 UPF0272 protein . 1 393 38.727 T 11-11-2016 IPR002822 Uncharacterised protein family UPF0272 SHALO_RS08210 1bb74ecea0d455555837d6c61bdb3335 395 Gene3D G3DSA:3.10.20.300 334 390 8.4E-14 T 11-11-2016 SHALO_RS01310 804d93181e7b4605e70c77469d0e4b4d 366 Gene3D G3DSA:3.90.1150.10 268 364 3.4E-17 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SHALO_RS01310 804d93181e7b4605e70c77469d0e4b4d 366 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 7 363 3.7E-105 T 11-11-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 SHALO_RS01310 804d93181e7b4605e70c77469d0e4b4d 366 Gene3D G3DSA:3.40.640.10 46 267 1.9E-57 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SHALO_RS01310 804d93181e7b4605e70c77469d0e4b4d 366 Pfam PF00155 Aminotransferase class I and II 31 358 3.5E-46 T 11-11-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SHALO_RS01310 804d93181e7b4605e70c77469d0e4b4d 366 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 2 365 56.066 T 11-11-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 SHALO_RS01310 804d93181e7b4605e70c77469d0e4b4d 366 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 224 233 - T 11-11-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 SHALO_RS01310 804d93181e7b4605e70c77469d0e4b4d 366 SUPERFAMILY SSF53383 13 362 1.17E-67 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase SHALO_RS04860 4ace8e3430fcbdf454adb05458b3e0f1 212 SUPERFAMILY SSF54862 1 171 9.63E-51 T 11-11-2016 SHALO_RS04860 4ace8e3430fcbdf454adb05458b3e0f1 212 Gene3D G3DSA:3.30.70.20 116 151 3.4E-13 T 11-11-2016 SHALO_RS04860 4ace8e3430fcbdf454adb05458b3e0f1 212 Gene3D G3DSA:3.30.70.20 84 115 2.6E-11 T 11-11-2016 SHALO_RS04860 4ace8e3430fcbdf454adb05458b3e0f1 212 Gene3D G3DSA:3.30.70.20 2 83 2.3E-24 T 11-11-2016 SHALO_RS04860 4ace8e3430fcbdf454adb05458b3e0f1 212 Gene3D G3DSA:3.30.70.20 152 192 2.3E-24 T 11-11-2016 SHALO_RS04860 4ace8e3430fcbdf454adb05458b3e0f1 212 Pfam PF13247 4Fe-4S dicluster domain 70 164 7.9E-25 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_RS04860 4ace8e3430fcbdf454adb05458b3e0f1 212 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 111 122 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_RS12960 1e226bad5347495ffeebea6d6e5aa166 322 Pfam PF00005 ABC transporter 17 165 2.3E-39 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_RS12960 1e226bad5347495ffeebea6d6e5aa166 322 SMART SM00382 26 214 1.8E-16 T 11-11-2016 IPR003593 AAA+ ATPase domain SHALO_RS12960 1e226bad5347495ffeebea6d6e5aa166 322 Gene3D G3DSA:3.40.50.300 1 228 2.2E-83 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS12960 1e226bad5347495ffeebea6d6e5aa166 322 SUPERFAMILY SSF52540 1 227 5.32E-77 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS12960 1e226bad5347495ffeebea6d6e5aa166 322 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHALO_RS10170 9b6450a80e34f1cb17a383cea170c710 287 Pfam PF06445 GyrI-like small molecule binding domain 133 285 4.6E-21 T 11-11-2016 IPR029442 GyrI-like small molecule binding domain SHALO_RS10170 9b6450a80e34f1cb17a383cea170c710 287 SUPERFAMILY SSF46689 12 63 4.39E-8 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 SHALO_RS10170 9b6450a80e34f1cb17a383cea170c710 287 SUPERFAMILY SSF55136 132 285 3.14E-25 T 11-11-2016 IPR011256 Regulatory factor, effector binding domain SHALO_RS10170 9b6450a80e34f1cb17a383cea170c710 287 Pfam PF12833 Helix-turn-helix domain 37 114 1.0E-21 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SHALO_RS10170 9b6450a80e34f1cb17a383cea170c710 287 SMART SM00871 131 285 1.6E-20 T 11-11-2016 IPR010499 Bacterial transcription activator, effector binding SHALO_RS10170 9b6450a80e34f1cb17a383cea170c710 287 Gene3D G3DSA:1.10.10.60 8 65 2.0E-15 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 SHALO_RS10170 9b6450a80e34f1cb17a383cea170c710 287 Gene3D G3DSA:3.20.80.10 133 285 4.3E-31 T 11-11-2016 IPR011256 Regulatory factor, effector binding domain SHALO_RS10170 9b6450a80e34f1cb17a383cea170c710 287 Gene3D G3DSA:1.10.10.60 66 115 3.3E-16 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 SHALO_RS10170 9b6450a80e34f1cb17a383cea170c710 287 SMART SM00342 29 113 2.0E-22 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SHALO_RS10170 9b6450a80e34f1cb17a383cea170c710 287 SUPERFAMILY SSF46689 67 114 1.34E-10 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 SHALO_RS10170 9b6450a80e34f1cb17a383cea170c710 287 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 97 113 2.1E-6 T 11-11-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SHALO_RS10170 9b6450a80e34f1cb17a383cea170c710 287 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 82 97 2.1E-6 T 11-11-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SHALO_RS03030 8bf405bddd74673202be3c412cb49e28 259 Pfam PF08378 Nuclease-related domain 22 134 5.4E-28 T 11-11-2016 IPR011528 Nuclease-related domain, NERD SHALO_RS03030 8bf405bddd74673202be3c412cb49e28 259 SUPERFAMILY SSF57783 210 247 4.42E-6 T 11-11-2016 SHALO_RS03030 8bf405bddd74673202be3c412cb49e28 259 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 213 249 2.0E-10 T 11-11-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 SHALO_RS03030 8bf405bddd74673202be3c412cb49e28 259 Gene3D G3DSA:3.30.65.10 212 247 2.3E-8 T 11-11-2016 SHALO_RS10605 36ee2cce6f8c7921155e6db5f641896b 603 Gene3D G3DSA:3.40.50.10490 244 442 1.3E-66 T 11-11-2016 SHALO_RS10605 36ee2cce6f8c7921155e6db5f641896b 603 SUPERFAMILY SSF56235 2 228 4.8E-62 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SHALO_RS10605 36ee2cce6f8c7921155e6db5f641896b 603 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 603 9.8E-233 T 11-11-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 SHALO_RS10605 36ee2cce6f8c7921155e6db5f641896b 603 Gene3D G3DSA:3.40.50.10490 449 603 2.9E-46 T 11-11-2016 SHALO_RS10605 36ee2cce6f8c7921155e6db5f641896b 603 Pfam PF13522 Glutamine amidotransferase domain 64 193 5.9E-20 T 11-11-2016 SHALO_RS10605 36ee2cce6f8c7921155e6db5f641896b 603 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 603 36.822 T 11-11-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 SHALO_RS10605 36ee2cce6f8c7921155e6db5f641896b 603 Gene3D G3DSA:3.60.20.10 2 224 7.8E-66 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SHALO_RS10605 36ee2cce6f8c7921155e6db5f641896b 603 Pfam PF01380 SIS domain 466 553 9.2E-10 T 11-11-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 SHALO_RS10605 36ee2cce6f8c7921155e6db5f641896b 603 Pfam PF01380 SIS domain 289 412 2.5E-29 T 11-11-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 SHALO_RS10605 36ee2cce6f8c7921155e6db5f641896b 603 SUPERFAMILY SSF53697 245 603 3.53E-92 T 11-11-2016 SHALO_RS00300 c419fa5f20cad40fdaa71237a2aa760e 421 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 201 214 6.1E-15 T 11-11-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 SHALO_RS00300 c419fa5f20cad40fdaa71237a2aa760e 421 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 154 168 6.1E-15 T 11-11-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 SHALO_RS00300 c419fa5f20cad40fdaa71237a2aa760e 421 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 2 18 6.1E-15 T 11-11-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 SHALO_RS00300 c419fa5f20cad40fdaa71237a2aa760e 421 SUPERFAMILY SSF53335 3 46 5.72E-74 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS00300 c419fa5f20cad40fdaa71237a2aa760e 421 SUPERFAMILY SSF53335 81 415 5.72E-74 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS00300 c419fa5f20cad40fdaa71237a2aa760e 421 Gene3D G3DSA:3.40.50.150 77 254 1.5E-50 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS00300 c419fa5f20cad40fdaa71237a2aa760e 421 Gene3D G3DSA:3.40.50.150 3 41 1.5E-50 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS00300 c419fa5f20cad40fdaa71237a2aa760e 421 Pfam PF00145 C-5 cytosine-specific DNA methylase 101 416 4.7E-54 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS00300 c419fa5f20cad40fdaa71237a2aa760e 421 Pfam PF00145 C-5 cytosine-specific DNA methylase 3 42 3.7E-5 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS00300 c419fa5f20cad40fdaa71237a2aa760e 421 Gene3D G3DSA:3.90.120.10 343 402 1.8E-9 T 11-11-2016 SHALO_RS00300 c419fa5f20cad40fdaa71237a2aa760e 421 ProSitePatterns PS00095 C-5 cytosine-specific DNA methylases C-terminal signature. 396 414 - T 11-11-2016 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site KEGG: 00270+2.1.1.37 SHALO_RS00300 c419fa5f20cad40fdaa71237a2aa760e 421 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 111 123 - T 11-11-2016 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37|Reactome: R-HSA-212300|Reactome: R-HSA-5334118 SHALO_RS00300 c419fa5f20cad40fdaa71237a2aa760e 421 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 101 414 8.2E-48 T 11-11-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 SHALO_RS04710 ba5faadfcbacc95d91bee5116b9d2e31 213 SMART SM00863 166 208 3.0E-7 T 11-11-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 SHALO_RS04710 ba5faadfcbacc95d91bee5116b9d2e31 213 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 178 208 2.6E-6 T 11-11-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 SHALO_RS04710 ba5faadfcbacc95d91bee5116b9d2e31 213 SUPERFAMILY SSF50447 3 83 5.65E-15 T 11-11-2016 IPR009000 Translation protein, beta-barrel domain SHALO_RS04710 ba5faadfcbacc95d91bee5116b9d2e31 213 SUPERFAMILY SSF55186 84 210 6.15E-28 T 11-11-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 SHALO_RS04710 ba5faadfcbacc95d91bee5116b9d2e31 213 Pfam PF01411 tRNA synthetases class II (A) 14 87 1.2E-8 T 11-11-2016 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 SHALO_RS05495 bfce19b26e12caa9f7d52cb1868a6d39 127 Pfam PF07883 Cupin domain 41 106 8.1E-12 T 11-11-2016 IPR013096 Cupin 2, conserved barrel SHALO_RS05495 bfce19b26e12caa9f7d52cb1868a6d39 127 Gene3D G3DSA:2.60.120.10 5 111 2.3E-23 T 11-11-2016 IPR014710 RmlC-like jelly roll fold SHALO_RS05495 bfce19b26e12caa9f7d52cb1868a6d39 127 SUPERFAMILY SSF51182 12 109 1.15E-21 T 11-11-2016 IPR011051 RmlC-like cupin domain SHALO_RS15070 30e458cfdd54ed0b1090344aece18674 779 SUPERFAMILY SSF53706 44 644 1.03E-136 T 11-11-2016 SHALO_RS15070 30e458cfdd54ed0b1090344aece18674 779 Pfam PF01568 Molydopterin dinucleotide binding domain 657 772 1.9E-17 T 11-11-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 SHALO_RS15070 30e458cfdd54ed0b1090344aece18674 779 Gene3D G3DSA:3.40.228.10 179 366 1.7E-56 T 11-11-2016 SHALO_RS15070 30e458cfdd54ed0b1090344aece18674 779 Gene3D G3DSA:3.40.50.740 618 628 6.6E-53 T 11-11-2016 SHALO_RS15070 30e458cfdd54ed0b1090344aece18674 779 Gene3D G3DSA:3.40.50.740 367 586 6.6E-53 T 11-11-2016 SHALO_RS15070 30e458cfdd54ed0b1090344aece18674 779 Gene3D G3DSA:3.40.50.740 104 178 6.6E-53 T 11-11-2016 SHALO_RS15070 30e458cfdd54ed0b1090344aece18674 779 Gene3D G3DSA:2.20.25.90 44 103 8.4E-17 T 11-11-2016 SHALO_RS15070 30e458cfdd54ed0b1090344aece18674 779 Gene3D G3DSA:2.40.40.20 642 779 6.6E-30 T 11-11-2016 SHALO_RS15070 30e458cfdd54ed0b1090344aece18674 779 Pfam PF00384 Molybdopterin oxidoreductase 102 519 3.6E-65 T 11-11-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS15070 30e458cfdd54ed0b1090344aece18674 779 SMART SM00926 45 99 1.7E-9 T 11-11-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS15070 30e458cfdd54ed0b1090344aece18674 779 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 46 98 2.8E-8 T 11-11-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS15070 30e458cfdd54ed0b1090344aece18674 779 SUPERFAMILY SSF50692 618 779 4.75E-28 T 11-11-2016 IPR009010 Aspartate decarboxylase-like domain SHALO_RS07960 d1330a29c453fe818a071dc1cdb6a1d9 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 157 181 8.6E-19 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SHALO_RS07960 d1330a29c453fe818a071dc1cdb6a1d9 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 122 130 8.6E-19 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SHALO_RS07960 d1330a29c453fe818a071dc1cdb6a1d9 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 280 298 8.6E-19 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SHALO_RS07960 d1330a29c453fe818a071dc1cdb6a1d9 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 6 28 8.6E-19 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SHALO_RS07960 d1330a29c453fe818a071dc1cdb6a1d9 317 Gene3D G3DSA:3.50.50.60 131 315 8.3E-23 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHALO_RS07960 d1330a29c453fe818a071dc1cdb6a1d9 317 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 8 289 1.4E-57 T 11-11-2016 SHALO_RS07960 d1330a29c453fe818a071dc1cdb6a1d9 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 270 292 1.1E-20 T 11-11-2016 SHALO_RS07960 d1330a29c453fe818a071dc1cdb6a1d9 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 1.1E-20 T 11-11-2016 SHALO_RS07960 d1330a29c453fe818a071dc1cdb6a1d9 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 243 259 1.1E-20 T 11-11-2016 SHALO_RS07960 d1330a29c453fe818a071dc1cdb6a1d9 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 161 179 1.1E-20 T 11-11-2016 SHALO_RS07960 d1330a29c453fe818a071dc1cdb6a1d9 317 SUPERFAMILY SSF51905 1 315 5.87E-34 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHALO_RS07960 d1330a29c453fe818a071dc1cdb6a1d9 317 Gene3D G3DSA:3.50.50.60 2 130 2.7E-17 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHALO_RS03440 fe7d7b840007f0f788f1e97967e3e60d 465 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 132 345 5.4E-64 T 11-11-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SHALO_RS03440 fe7d7b840007f0f788f1e97967e3e60d 465 Gene3D G3DSA:3.40.50.300 78 347 3.7E-109 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS03440 fe7d7b840007f0f788f1e97967e3e60d 465 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 336 345 - T 11-11-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SHALO_RS03440 fe7d7b840007f0f788f1e97967e3e60d 465 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 463 54.911 T 11-11-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201 SHALO_RS03440 fe7d7b840007f0f788f1e97967e3e60d 465 Gene3D G3DSA:2.40.10.170 2 77 1.4E-26 T 11-11-2016 SHALO_RS03440 fe7d7b840007f0f788f1e97967e3e60d 465 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 5 75 1.7E-17 T 11-11-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SHALO_RS03440 fe7d7b840007f0f788f1e97967e3e60d 465 SUPERFAMILY SSF52540 79 350 7.07E-91 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS03440 fe7d7b840007f0f788f1e97967e3e60d 465 Gene3D G3DSA:1.10.1140.10 348 464 1.4E-56 T 11-11-2016 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SHALO_RS03440 fe7d7b840007f0f788f1e97967e3e60d 465 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 2 463 2.0E-253 T 11-11-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201 SHALO_RS03440 fe7d7b840007f0f788f1e97967e3e60d 465 SUPERFAMILY SSF50615 2 77 2.2E-21 T 11-11-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SHALO_RS03440 fe7d7b840007f0f788f1e97967e3e60d 465 SMART SM00382 144 322 1.7E-4 T 11-11-2016 IPR003593 AAA+ ATPase domain SHALO_RS03440 fe7d7b840007f0f788f1e97967e3e60d 465 SUPERFAMILY SSF47917 348 464 1.26E-52 T 11-11-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SHALO_RS11305 85bfc5d70ceb118a018580b619a46039 298 SUPERFAMILY SSF103481 188 288 9.81E-16 T 11-11-2016 SHALO_RS11305 85bfc5d70ceb118a018580b619a46039 298 SUPERFAMILY SSF103481 42 139 2.22E-12 T 11-11-2016 SHALO_RS11305 85bfc5d70ceb118a018580b619a46039 298 Pfam PF00892 EamA-like transporter family 4 136 5.9E-23 T 11-11-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SHALO_RS11305 85bfc5d70ceb118a018580b619a46039 298 Pfam PF00892 EamA-like transporter family 151 286 1.7E-23 T 11-11-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SHALO_RS00760 29f3f73e4e595cff3cf477f2ea398734 192 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 21 172 7.3E-63 T 11-11-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 SHALO_RS00760 29f3f73e4e595cff3cf477f2ea398734 192 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 20 177 38.345 T 11-11-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 SHALO_RS00760 29f3f73e4e595cff3cf477f2ea398734 192 Pfam PF01625 Peptide methionine sulfoxide reductase 23 172 1.9E-67 T 11-11-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 SHALO_RS00760 29f3f73e4e595cff3cf477f2ea398734 192 Gene3D G3DSA:3.30.1060.10 10 172 3.5E-77 T 11-11-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 SHALO_RS00760 29f3f73e4e595cff3cf477f2ea398734 192 SUPERFAMILY SSF55068 12 183 6.8E-79 T 11-11-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 SHALO_RS08115 2ee71846cf27106554c758f6569ee861 522 SUPERFAMILY SSF53807 5 453 1.78E-118 T 11-11-2016 SHALO_RS08115 2ee71846cf27106554c758f6569ee861 522 Gene3D G3DSA:3.40.50.1980 190 301 4.1E-36 T 11-11-2016 SHALO_RS08115 2ee71846cf27106554c758f6569ee861 522 ProSitePatterns PS00699 Nitrogenases component 1 alpha and beta subunits signature 1. 68 75 - T 11-11-2016 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 SHALO_RS08115 2ee71846cf27106554c758f6569ee861 522 ProSitePatterns PS00090 Nitrogenases component 1 alpha and beta subunits signature 2. 136 150 - T 11-11-2016 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 SHALO_RS08115 2ee71846cf27106554c758f6569ee861 522 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 49 446 1.7E-93 T 11-11-2016 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 SHALO_RS08115 2ee71846cf27106554c758f6569ee861 522 TIGRFAM TIGR01862 N2-ase-Ialpha: nitrogenase component I, alpha chain 14 454 1.5E-202 T 11-11-2016 IPR010143 Nitrogenase component 1, alpha chain GO:0009399|GO:0016163|GO:0051536|GO:0055114 KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 SHALO_RS08115 2ee71846cf27106554c758f6569ee861 522 Gene3D G3DSA:3.40.50.1980 325 467 2.5E-38 T 11-11-2016 SHALO_RS08115 2ee71846cf27106554c758f6569ee861 522 TIGRFAM TIGR01284 alt_nitrog_alph: nitrogenase alpha chain 4 459 3.9E-245 T 11-11-2016 IPR005974 Nitrogenase alpha chain GO:0009399|GO:0016163|GO:0051536|GO:0055114 KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 SHALO_RS08115 2ee71846cf27106554c758f6569ee861 522 Gene3D G3DSA:3.40.50.1980 49 188 3.1E-41 T 11-11-2016 SHALO_RS08115 2ee71846cf27106554c758f6569ee861 522 TIGRFAM TIGR01861 ANFD: nitrogenase iron-iron protein, alpha chain 1 510 0.0 T 11-11-2016 IPR011290 Nitrogenase iron-iron protein, alpha chain GO:0009399|GO:0016163|GO:0051536|GO:0055114 KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 SHALO_RS12780 7772a9ac539bbad3c8309e7f69dcd491 306 Pfam PF13344 Haloacid dehalogenase-like hydrolase 45 130 4.3E-14 T 11-11-2016 IPR006357 HAD-superfamily hydrolase, subfamily IIA SHALO_RS12780 7772a9ac539bbad3c8309e7f69dcd491 306 Gene3D G3DSA:3.40.50.1000 219 303 1.5E-29 T 11-11-2016 IPR023214 HAD-like domain SHALO_RS12780 7772a9ac539bbad3c8309e7f69dcd491 306 Gene3D G3DSA:3.40.50.1000 32 110 1.5E-29 T 11-11-2016 IPR023214 HAD-like domain SHALO_RS12780 7772a9ac539bbad3c8309e7f69dcd491 306 SUPERFAMILY SSF56784 42 300 3.04E-37 T 11-11-2016 IPR023214 HAD-like domain SHALO_RS12780 7772a9ac539bbad3c8309e7f69dcd491 306 Pfam PF13242 HAD-hyrolase-like 221 271 3.9E-11 T 11-11-2016 SHALO_RS04065 86119be541fe0806a03fe0e56d10bd92 527 SUPERFAMILY SSF82866 315 515 2.22E-34 T 11-11-2016 SHALO_RS04065 86119be541fe0806a03fe0e56d10bd92 527 Pfam PF00873 AcrB/AcrD/AcrF family 13 523 2.0E-75 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SHALO_RS04065 86119be541fe0806a03fe0e56d10bd92 527 Gene3D G3DSA:3.30.2090.10 194 277 6.4E-11 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SHALO_RS04065 86119be541fe0806a03fe0e56d10bd92 527 Gene3D G3DSA:1.20.1640.10 306 522 6.2E-40 T 11-11-2016 SHALO_RS04065 86119be541fe0806a03fe0e56d10bd92 527 PRINTS PR00702 Acriflavin resistance protein family signature 46 64 1.7E-25 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SHALO_RS04065 86119be541fe0806a03fe0e56d10bd92 527 PRINTS PR00702 Acriflavin resistance protein family signature 488 511 1.7E-25 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SHALO_RS04065 86119be541fe0806a03fe0e56d10bd92 527 PRINTS PR00702 Acriflavin resistance protein family signature 18 42 1.7E-25 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SHALO_RS04065 86119be541fe0806a03fe0e56d10bd92 527 PRINTS PR00702 Acriflavin resistance protein family signature 352 375 1.7E-25 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SHALO_RS04065 86119be541fe0806a03fe0e56d10bd92 527 PRINTS PR00702 Acriflavin resistance protein family signature 406 430 1.7E-25 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SHALO_RS04065 86119be541fe0806a03fe0e56d10bd92 527 SUPERFAMILY SSF82714 194 276 5.23E-10 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SHALO_RS04065 86119be541fe0806a03fe0e56d10bd92 527 Gene3D G3DSA:3.30.70.1430 53 142 7.5E-15 T 11-11-2016 SHALO_RS04065 86119be541fe0806a03fe0e56d10bd92 527 SUPERFAMILY SSF82693 54 142 7.32E-17 T 11-11-2016 SHALO_RS04550 75f8e4811659fb6a365f5a6804fa682f 177 PIRSF PIRSF000013 2 170 2.3E-9 T 11-11-2016 IPR024717 Denitrification system component NapC/NirT/NrfH GO:0016021|GO:0019333|GO:0020037 SHALO_RS04550 75f8e4811659fb6a365f5a6804fa682f 177 SUPERFAMILY SSF48695 9 158 2.1E-26 T 11-11-2016 IPR011031 Multihaem cytochrome SHALO_RS04550 75f8e4811659fb6a365f5a6804fa682f 177 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 8 160 5.4E-19 T 11-11-2016 IPR005126 NapC/NirT cytochrome c, N-terminal SHALO_RS04550 75f8e4811659fb6a365f5a6804fa682f 177 TIGRFAM TIGR03153 cytochr_NrfH: cytochrome c nitrite reductase, small subunit 14 158 7.8E-53 T 11-11-2016 IPR017571 Cytochrome c nitrite reductase, small subunit GO:0016021|GO:0022900 SHALO_RS04550 75f8e4811659fb6a365f5a6804fa682f 177 Gene3D G3DSA:1.10.3820.10 4 161 7.2E-25 T 11-11-2016 SHALO_RS01175 4b9eb51be31198a7238b2f2d2e66d804 410 SMART SM00994 3 42 8.7E-14 T 11-11-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 SHALO_RS01175 4b9eb51be31198a7238b2f2d2e66d804 410 SUPERFAMILY SSF52540 58 394 7.83E-73 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS01175 4b9eb51be31198a7238b2f2d2e66d804 410 SUPERFAMILY SSF57716 5 38 8.55E-8 T 11-11-2016 SHALO_RS01175 4b9eb51be31198a7238b2f2d2e66d804 410 Gene3D G3DSA:1.10.8.60 309 408 5.0E-37 T 11-11-2016 SHALO_RS01175 4b9eb51be31198a7238b2f2d2e66d804 410 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 310 380 9.8E-15 T 11-11-2016 IPR019489 Clp ATPase, C-terminal SHALO_RS01175 4b9eb51be31198a7238b2f2d2e66d804 410 Pfam PF07724 AAA domain (Cdc48 subfamily) 108 302 3.1E-47 T 11-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SHALO_RS01175 4b9eb51be31198a7238b2f2d2e66d804 410 SMART SM00382 107 269 8.0E-13 T 11-11-2016 IPR003593 AAA+ ATPase domain SHALO_RS01175 4b9eb51be31198a7238b2f2d2e66d804 410 SMART SM01086 309 403 1.0E-31 T 11-11-2016 IPR019489 Clp ATPase, C-terminal SHALO_RS01175 4b9eb51be31198a7238b2f2d2e66d804 410 Gene3D G3DSA:3.40.50.300 286 301 1.5E-49 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS01175 4b9eb51be31198a7238b2f2d2e66d804 410 Gene3D G3DSA:3.40.50.300 62 249 1.5E-49 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS01175 4b9eb51be31198a7238b2f2d2e66d804 410 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 406 48.02 T 11-11-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 SHALO_RS01175 4b9eb51be31198a7238b2f2d2e66d804 410 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 4 401 2.1E-185 T 11-11-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 SHALO_RS01175 4b9eb51be31198a7238b2f2d2e66d804 410 Pfam PF06689 ClpX C4-type zinc finger 5 39 3.3E-11 T 11-11-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 SHALO_RS00200 bab4d8b28255dd95d5641df3172bd13e 144 Gene3D G3DSA:3.40.630.30 1 136 1.4E-30 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase SHALO_RS00200 bab4d8b28255dd95d5641df3172bd13e 144 SUPERFAMILY SSF55729 1 135 3.66E-23 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase SHALO_RS00200 bab4d8b28255dd95d5641df3172bd13e 144 Pfam PF00583 Acetyltransferase (GNAT) family 50 131 3.5E-12 T 11-11-2016 IPR000182 GNAT domain GO:0008080 SHALO_RS10590 68410d710a7bc63451c16b295e271357 402 PIRSF PIRSF001413 2 401 4.3E-149 T 11-11-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 SHALO_RS10590 68410d710a7bc63451c16b295e271357 402 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 9 396 47.483 T 11-11-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 SHALO_RS10590 68410d710a7bc63451c16b295e271357 402 Gene3D G3DSA:3.40.50.1100 179 393 2.2E-73 T 11-11-2016 SHALO_RS10590 68410d710a7bc63451c16b295e271357 402 SUPERFAMILY SSF53686 10 392 3.01E-128 T 11-11-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SHALO_RS10590 68410d710a7bc63451c16b295e271357 402 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 88 102 - T 11-11-2016 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 SHALO_RS10590 68410d710a7bc63451c16b295e271357 402 Gene3D G3DSA:3.40.50.1100 107 178 1.1E-16 T 11-11-2016 SHALO_RS10590 68410d710a7bc63451c16b295e271357 402 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 60 383 3.7E-38 T 11-11-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SHALO_RS10590 68410d710a7bc63451c16b295e271357 402 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 14 393 2.9E-155 T 11-11-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 SHALO_RS00040 f033a16ae9b2ba1a0b976457431b4b01 224 SMART SM00986 51 211 1.3E-35 T 11-11-2016 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 SHALO_RS00040 f033a16ae9b2ba1a0b976457431b4b01 224 SUPERFAMILY SSF52141 5 223 8.29E-91 T 11-11-2016 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 SHALO_RS00040 f033a16ae9b2ba1a0b976457431b4b01 224 SMART SM00987 51 211 1.3E-35 T 11-11-2016 SHALO_RS00040 f033a16ae9b2ba1a0b976457431b4b01 224 Gene3D G3DSA:3.40.470.10 5 223 1.3E-97 T 11-11-2016 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 SHALO_RS00040 f033a16ae9b2ba1a0b976457431b4b01 224 Pfam PF03167 Uracil DNA glycosylase superfamily 56 210 7.3E-20 T 11-11-2016 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 SHALO_RS00040 f033a16ae9b2ba1a0b976457431b4b01 224 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 8 215 1.2E-81 T 11-11-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 SHALO_RS00040 f033a16ae9b2ba1a0b976457431b4b01 224 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 7 222 40.094 T 11-11-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 SHALO_RS02925 3118256df83ff2b1f9ee11bcd152cdee 421 Pfam PF00919 Uncharacterized protein family UPF0004 1 89 1.3E-19 T 11-11-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 SHALO_RS02925 3118256df83ff2b1f9ee11bcd152cdee 421 Pfam PF04055 Radical SAM superfamily 131 306 1.3E-26 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SHALO_RS02925 3118256df83ff2b1f9ee11bcd152cdee 421 Pfam PF01938 TRAM domain 364 420 8.1E-8 T 11-11-2016 IPR002792 TRAM domain SHALO_RS02925 3118256df83ff2b1f9ee11bcd152cdee 421 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 1 420 4.3E-163 T 11-11-2016 SHALO_RS02925 3118256df83ff2b1f9ee11bcd152cdee 421 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 131 151 - T 11-11-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 SHALO_RS02925 3118256df83ff2b1f9ee11bcd152cdee 421 Gene3D G3DSA:3.80.30.20 127 357 3.5E-72 T 11-11-2016 IPR023404 Radical SAM, alpha/beta horseshoe SHALO_RS02925 3118256df83ff2b1f9ee11bcd152cdee 421 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 1 417 1.1E-129 T 11-11-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 SHALO_RS02925 3118256df83ff2b1f9ee11bcd152cdee 421 SMART SM00729 127 349 1.2E-51 T 11-11-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 SHALO_RS02925 3118256df83ff2b1f9ee11bcd152cdee 421 SUPERFAMILY SSF102114 98 353 2.49E-55 T 11-11-2016 SHALO_RS05260 044ce3486c11f246816ae08a38cc6725 3111 SUPERFAMILY SSF51120 2895 3016 1.7E-22 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_RS05260 044ce3486c11f246816ae08a38cc6725 3111 PRINTS PR00313 NodO calcium binding signature 2934 2942 1.3E-9 T 11-11-2016 SHALO_RS05260 044ce3486c11f246816ae08a38cc6725 3111 PRINTS PR00313 NodO calcium binding signature 2979 2988 1.3E-9 T 11-11-2016 SHALO_RS05260 044ce3486c11f246816ae08a38cc6725 3111 PRINTS PR00313 NodO calcium binding signature 2952 2960 1.3E-9 T 11-11-2016 SHALO_RS05260 044ce3486c11f246816ae08a38cc6725 3111 PRINTS PR00313 NodO calcium binding signature 2922 2933 1.3E-9 T 11-11-2016 SHALO_RS05260 044ce3486c11f246816ae08a38cc6725 3111 Gene3D G3DSA:2.60.40.60 1356 1463 1.3E-4 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 SHALO_RS05260 044ce3486c11f246816ae08a38cc6725 3111 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 2948 2966 - T 11-11-2016 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_RS05260 044ce3486c11f246816ae08a38cc6725 3111 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2951 2968 0.0043 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS05260 044ce3486c11f246816ae08a38cc6725 3111 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2969 2986 0.033 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS05260 044ce3486c11f246816ae08a38cc6725 3111 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2924 2941 8.9E-5 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS05260 044ce3486c11f246816ae08a38cc6725 3111 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 2939 2957 - T 11-11-2016 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_RS05260 044ce3486c11f246816ae08a38cc6725 3111 SMART SM00112 636 740 1.6 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 SHALO_RS05260 044ce3486c11f246816ae08a38cc6725 3111 SMART SM00112 1377 1464 0.023 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 SHALO_RS05260 044ce3486c11f246816ae08a38cc6725 3111 SMART SM00112 509 611 0.44 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 SHALO_RS05260 044ce3486c11f246816ae08a38cc6725 3111 SMART SM00112 205 302 0.45 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 SHALO_RS05260 044ce3486c11f246816ae08a38cc6725 3111 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 1535 1618 8.3E-15 T 11-11-2016 IPR010221 VCBS repeat SHALO_RS05260 044ce3486c11f246816ae08a38cc6725 3111 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 1032 1108 4.4E-11 T 11-11-2016 IPR010221 VCBS repeat SHALO_RS05260 044ce3486c11f246816ae08a38cc6725 3111 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 1288 1370 3.4E-9 T 11-11-2016 IPR010221 VCBS repeat SHALO_RS05260 044ce3486c11f246816ae08a38cc6725 3111 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 877 988 7.9E-12 T 11-11-2016 IPR010221 VCBS repeat SHALO_RS05260 044ce3486c11f246816ae08a38cc6725 3111 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 760 871 4.3E-13 T 11-11-2016 IPR010221 VCBS repeat SHALO_RS05260 044ce3486c11f246816ae08a38cc6725 3111 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 1375 1474 8.1E-14 T 11-11-2016 IPR010221 VCBS repeat SHALO_RS05260 044ce3486c11f246816ae08a38cc6725 3111 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 1168 1257 4.0E-6 T 11-11-2016 IPR010221 VCBS repeat SHALO_RS05260 044ce3486c11f246816ae08a38cc6725 3111 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 1683 1754 4.2E-4 T 11-11-2016 IPR010221 VCBS repeat SHALO_RS06300 d02634c6c692d355c1eb2e811f659741 461 Gene3D G3DSA:1.10.10.10 3 75 5.8E-23 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS06300 d02634c6c692d355c1eb2e811f659741 461 SUPERFAMILY SSF46785 5 77 5.62E-16 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS06300 d02634c6c692d355c1eb2e811f659741 461 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 74 4.3E-12 T 11-11-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SHALO_RS06300 d02634c6c692d355c1eb2e811f659741 461 Pfam PF00155 Aminotransferase class I and II 128 449 4.6E-19 T 11-11-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SHALO_RS06300 d02634c6c692d355c1eb2e811f659741 461 Gene3D G3DSA:3.90.1150.10 322 454 3.3E-6 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SHALO_RS06300 d02634c6c692d355c1eb2e811f659741 461 SMART SM00345 16 74 1.1E-10 T 11-11-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SHALO_RS06300 d02634c6c692d355c1eb2e811f659741 461 Gene3D G3DSA:3.40.640.10 133 321 8.2E-50 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SHALO_RS06300 d02634c6c692d355c1eb2e811f659741 461 SUPERFAMILY SSF53383 68 455 1.32E-76 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase SHALO_RS13465 03ae5299d0f3a89469ed0e55bfa49c8e 186 Gene3D G3DSA:3.40.50.740 114 182 2.9E-21 T 11-11-2016 SHALO_RS13465 03ae5299d0f3a89469ed0e55bfa49c8e 186 SUPERFAMILY SSF53706 54 186 1.07E-45 T 11-11-2016 SHALO_RS13465 03ae5299d0f3a89469ed0e55bfa49c8e 186 Gene3D G3DSA:2.20.25.90 55 113 7.8E-16 T 11-11-2016 SHALO_RS13465 03ae5299d0f3a89469ed0e55bfa49c8e 186 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 56 101 1.0E-10 T 11-11-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS13465 03ae5299d0f3a89469ed0e55bfa49c8e 186 SMART SM00926 55 109 2.4E-12 T 11-11-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS13465 03ae5299d0f3a89469ed0e55bfa49c8e 186 Pfam PF00384 Molybdopterin oxidoreductase 112 181 8.3E-11 T 11-11-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS11070 a4400d2a6520ee3e4fc4a86864a68ea3 240 SUPERFAMILY SSF51366 1 234 1.21E-68 T 11-11-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 SHALO_RS11070 a4400d2a6520ee3e4fc4a86864a68ea3 240 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 3 230 2.7E-80 T 11-11-2016 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 SHALO_RS11070 a4400d2a6520ee3e4fc4a86864a68ea3 240 Gene3D G3DSA:3.20.20.70 1 235 2.5E-80 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_RS11070 a4400d2a6520ee3e4fc4a86864a68ea3 240 Pfam PF00977 Histidine biosynthesis protein 3 226 1.4E-75 T 11-11-2016 IPR006062 Histidine biosynthesis GO:0000105 SHALO_RS11070 a4400d2a6520ee3e4fc4a86864a68ea3 240 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 2 234 35.545 T 11-11-2016 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 SHALO_RS03080 b26309c525d48946d704a74d70b7109d 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 2.5E-8 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SHALO_RS03080 b26309c525d48946d704a74d70b7109d 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 2.5E-8 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SHALO_RS03080 b26309c525d48946d704a74d70b7109d 200 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 57 3.5E-16 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SHALO_RS03080 b26309c525d48946d704a74d70b7109d 200 Gene3D G3DSA:1.10.10.60 1 53 3.5E-21 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 SHALO_RS03080 b26309c525d48946d704a74d70b7109d 200 SUPERFAMILY SSF46689 2 79 1.7E-19 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 SHALO_RS03080 b26309c525d48946d704a74d70b7109d 200 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 146 198 6.8E-11 T 11-11-2016 SHALO_RS03080 b26309c525d48946d704a74d70b7109d 200 Gene3D G3DSA:1.10.357.10 54 199 1.0E-31 T 11-11-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SHALO_RS02180 303c387a093d3bb90b5da1a6dbfd6285 372 Pfam PF00149 Calcineurin-like phosphoesterase 2 201 2.9E-15 T 11-11-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 SHALO_RS02180 303c387a093d3bb90b5da1a6dbfd6285 372 Gene3D G3DSA:3.60.21.10 2 251 7.4E-41 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like SHALO_RS02180 303c387a093d3bb90b5da1a6dbfd6285 372 SUPERFAMILY SSF56300 2 293 2.39E-44 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like SHALO_RS01305 67155278d6daf32128940afc27b49d4c 355 Gene3D G3DSA:3.30.70.260 272 351 5.5E-25 T 11-11-2016 SHALO_RS01305 67155278d6daf32128940afc27b49d4c 355 Gene3D G3DSA:3.40.190.10 172 252 1.0E-24 T 11-11-2016 SHALO_RS01305 67155278d6daf32128940afc27b49d4c 355 SUPERFAMILY SSF48600 4 86 2.14E-20 T 11-11-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 SHALO_RS01305 67155278d6daf32128940afc27b49d4c 355 TIGRFAM TIGR01807 CM_P2: chorismate mutase 6 77 1.8E-24 T 11-11-2016 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626 SHALO_RS01305 67155278d6daf32128940afc27b49d4c 355 SMART SM00830 8 87 1.8E-26 T 11-11-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 SHALO_RS01305 67155278d6daf32128940afc27b49d4c 355 SUPERFAMILY SSF55021 259 351 1.73E-20 T 11-11-2016 SHALO_RS01305 67155278d6daf32128940afc27b49d4c 355 Gene3D G3DSA:3.40.190.10 86 171 3.7E-27 T 11-11-2016 SHALO_RS01305 67155278d6daf32128940afc27b49d4c 355 Pfam PF01817 Chorismate mutase type II 8 84 1.1E-23 T 11-11-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 SHALO_RS01305 67155278d6daf32128940afc27b49d4c 355 PIRSF PIRSF001500 1 354 1.8E-120 T 11-11-2016 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 SHALO_RS01305 67155278d6daf32128940afc27b49d4c 355 Pfam PF00800 Prephenate dehydratase 89 264 6.9E-59 T 11-11-2016 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 SHALO_RS01305 67155278d6daf32128940afc27b49d4c 355 Gene3D G3DSA:1.20.59.10 3 84 3.7E-22 T 11-11-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 SHALO_RS01305 67155278d6daf32128940afc27b49d4c 355 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 302 309 - T 11-11-2016 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 SHALO_RS01305 67155278d6daf32128940afc27b49d4c 355 Pfam PF01842 ACT domain 277 337 3.7E-8 T 11-11-2016 IPR002912 ACT domain GO:0008152|GO:0016597 SHALO_RS01305 67155278d6daf32128940afc27b49d4c 355 SUPERFAMILY SSF53850 88 265 4.88E-54 T 11-11-2016 SHALO_RS00590 3731401059b4f82f247da9f088a1f7bf 247 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 1 247 24.797 T 11-11-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 SHALO_RS00590 3731401059b4f82f247da9f088a1f7bf 247 Gene3D G3DSA:3.10.310.10 1 129 8.2E-37 T 11-11-2016 SHALO_RS00590 3731401059b4f82f247da9f088a1f7bf 247 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 2 245 6.3E-57 T 11-11-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 SHALO_RS00590 3731401059b4f82f247da9f088a1f7bf 247 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 60 74 - T 11-11-2016 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 SHALO_RS00590 3731401059b4f82f247da9f088a1f7bf 247 Gene3D G3DSA:3.10.310.10 130 226 2.4E-21 T 11-11-2016 SHALO_RS00590 3731401059b4f82f247da9f088a1f7bf 247 SUPERFAMILY SSF54506 1 118 2.69E-30 T 11-11-2016 SHALO_RS00590 3731401059b4f82f247da9f088a1f7bf 247 Pfam PF01678 Diaminopimelate epimerase 4 106 1.5E-22 T 11-11-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 SHALO_RS00590 3731401059b4f82f247da9f088a1f7bf 247 Pfam PF01678 Diaminopimelate epimerase 133 228 1.0E-9 T 11-11-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 SHALO_RS00590 3731401059b4f82f247da9f088a1f7bf 247 SUPERFAMILY SSF54506 124 246 6.28E-23 T 11-11-2016 SHALO_RS08270 d8e97dc4e2630661dfb28756db027d09 373 Gene3D G3DSA:3.20.20.105 1 371 1.0E-152 T 11-11-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 SHALO_RS08270 d8e97dc4e2630661dfb28756db027d09 373 Pfam PF01702 Queuine tRNA-ribosyltransferase 128 367 1.5E-88 T 11-11-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 SHALO_RS08270 d8e97dc4e2630661dfb28756db027d09 373 SUPERFAMILY SSF51713 1 370 4.58E-147 T 11-11-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 SHALO_RS08270 d8e97dc4e2630661dfb28756db027d09 373 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 3 371 3.6E-157 T 11-11-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 SHALO_RS08270 d8e97dc4e2630661dfb28756db027d09 373 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 3 370 7.7E-150 T 11-11-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 SHALO_RS08270 d8e97dc4e2630661dfb28756db027d09 373 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 1 365 53.714 T 11-11-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 SHALO_RS08390 e5a99a97a469bf44a4273dbbef3ac27d 409 Gene3D G3DSA:1.20.1600.10 26 401 4.4E-44 T 11-11-2016 SHALO_RS08390 e5a99a97a469bf44a4273dbbef3ac27d 409 SUPERFAMILY SSF56954 5 401 1.14E-54 T 11-11-2016 SHALO_RS08390 e5a99a97a469bf44a4273dbbef3ac27d 409 Pfam PF02321 Outer membrane efflux protein 224 401 2.0E-23 T 11-11-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SHALO_RS08390 e5a99a97a469bf44a4273dbbef3ac27d 409 Pfam PF02321 Outer membrane efflux protein 21 201 3.3E-19 T 11-11-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SHALO_RS01650 1c98b8a18b517f192677ed24917191a1 792 SUPERFAMILY SSF55073 619 790 1.33E-44 T 11-11-2016 IPR029787 Nucleotide cyclase SHALO_RS01650 1c98b8a18b517f192677ed24917191a1 792 Gene3D G3DSA:3.40.190.10 125 221 3.7E-14 T 11-11-2016 SHALO_RS01650 1c98b8a18b517f192677ed24917191a1 792 SUPERFAMILY SSF55781 316 470 8.29E-21 T 11-11-2016 IPR029016 GAF domain-like SHALO_RS01650 1c98b8a18b517f192677ed24917191a1 792 Pfam PF00990 Diguanylate cyclase, GGDEF domain 614 784 1.5E-42 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS01650 1c98b8a18b517f192677ed24917191a1 792 Gene3D G3DSA:3.30.450.20 479 600 1.1E-19 T 11-11-2016 SHALO_RS01650 1c98b8a18b517f192677ed24917191a1 792 SMART SM00091 483 549 1.2E-5 T 11-11-2016 IPR000014 PAS domain SHALO_RS01650 1c98b8a18b517f192677ed24917191a1 792 SUPERFAMILY SSF55785 489 605 1.27E-19 T 11-11-2016 IPR000014 PAS domain SHALO_RS01650 1c98b8a18b517f192677ed24917191a1 792 SMART SM00065 327 479 3.2E-8 T 11-11-2016 IPR003018 GAF domain GO:0005515 SHALO_RS01650 1c98b8a18b517f192677ed24917191a1 792 Gene3D G3DSA:3.40.190.10 44 124 1.1E-31 T 11-11-2016 SHALO_RS01650 1c98b8a18b517f192677ed24917191a1 792 Gene3D G3DSA:3.40.190.10 227 267 1.1E-31 T 11-11-2016 SHALO_RS01650 1c98b8a18b517f192677ed24917191a1 792 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 479 608 5.1E-20 T 11-11-2016 IPR000014 PAS domain SHALO_RS01650 1c98b8a18b517f192677ed24917191a1 792 SMART SM00086 561 603 1.2E-5 T 11-11-2016 IPR001610 PAC motif SHALO_RS01650 1c98b8a18b517f192677ed24917191a1 792 SUPERFAMILY SSF53850 40 268 5.66E-51 T 11-11-2016 SHALO_RS01650 1c98b8a18b517f192677ed24917191a1 792 Pfam PF13426 PAS domain 494 602 2.9E-8 T 11-11-2016 IPR000014 PAS domain SHALO_RS01650 1c98b8a18b517f192677ed24917191a1 792 Gene3D G3DSA:3.30.450.40 318 478 4.3E-16 T 11-11-2016 IPR029016 GAF domain-like SHALO_RS01650 1c98b8a18b517f192677ed24917191a1 792 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 611 786 1.8E-41 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS01650 1c98b8a18b517f192677ed24917191a1 792 Gene3D G3DSA:3.30.70.270 616 791 5.3E-52 T 11-11-2016 SHALO_RS01650 1c98b8a18b517f192677ed24917191a1 792 Pfam PF13185 GAF domain 330 470 4.1E-11 T 11-11-2016 IPR003018 GAF domain GO:0005515 SHALO_RS01650 1c98b8a18b517f192677ed24917191a1 792 SMART SM00062 47 267 1.2E-34 T 11-11-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SHALO_RS01650 1c98b8a18b517f192677ed24917191a1 792 SMART SM00267 603 788 1.7E-54 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS01650 1c98b8a18b517f192677ed24917191a1 792 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 48 265 2.1E-46 T 11-11-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SHALO_RS08350 2a0248a84f0cb0a291c460babc279e58 574 SUPERFAMILY SSF52518 359 554 2.47E-54 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold SHALO_RS08350 2a0248a84f0cb0a291c460babc279e58 574 SUPERFAMILY SSF52467 182 351 4.16E-40 T 11-11-2016 IPR029035 DHS-like NAD/FAD-binding domain SHALO_RS08350 2a0248a84f0cb0a291c460babc279e58 574 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 418 437 - T 11-11-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 SHALO_RS08350 2a0248a84f0cb0a291c460babc279e58 574 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 171 1.3E-39 T 11-11-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 SHALO_RS08350 2a0248a84f0cb0a291c460babc279e58 574 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 191 319 3.1E-28 T 11-11-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 SHALO_RS08350 2a0248a84f0cb0a291c460babc279e58 574 SUPERFAMILY SSF52518 4 176 8.08E-41 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold SHALO_RS08350 2a0248a84f0cb0a291c460babc279e58 574 Gene3D G3DSA:3.40.50.1220 186 340 4.6E-40 T 11-11-2016 IPR029035 DHS-like NAD/FAD-binding domain SHALO_RS08350 2a0248a84f0cb0a291c460babc279e58 574 Gene3D G3DSA:3.40.50.970 354 548 7.7E-56 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold SHALO_RS08350 2a0248a84f0cb0a291c460babc279e58 574 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 381 527 3.6E-38 T 11-11-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 SHALO_RS08350 2a0248a84f0cb0a291c460babc279e58 574 Gene3D G3DSA:3.40.50.970 4 174 1.2E-48 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold SHALO_RS03290 e15ea821810990dcb4c386d489b8f416 369 TIGRFAM TIGR01392 homoserO_Ac_trn: homoserine O-acetyltransferase 11 365 1.1E-112 T 11-11-2016 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344 SHALO_RS03290 e15ea821810990dcb4c386d489b8f416 369 PIRSF PIRSF000443 2 369 3.1E-119 T 11-11-2016 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344 SHALO_RS03290 e15ea821810990dcb4c386d489b8f416 369 Pfam PF00561 alpha/beta hydrolase fold 41 353 9.6E-25 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 SHALO_RS03290 e15ea821810990dcb4c386d489b8f416 369 SUPERFAMILY SSF53474 9 366 3.45E-82 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold SHALO_RS03290 e15ea821810990dcb4c386d489b8f416 369 Gene3D G3DSA:3.40.50.1820 23 365 4.8E-27 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold SHALO_RS08520 ab15cd7be3a7bd57d481f42cce2227ab 358 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 100 111 - T 11-11-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 SHALO_RS08520 ab15cd7be3a7bd57d481f42cce2227ab 358 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 171 182 - T 11-11-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 SHALO_RS08520 ab15cd7be3a7bd57d481f42cce2227ab 358 TIGRFAM TIGR01520 FruBisAldo_II_A: fructose-bisphosphate aldolase, class II 6 357 1.2E-164 T 11-11-2016 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 SHALO_RS08520 ab15cd7be3a7bd57d481f42cce2227ab 358 PIRSF PIRSF001359 15 358 2.0E-90 T 11-11-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 SHALO_RS08520 ab15cd7be3a7bd57d481f42cce2227ab 358 Gene3D G3DSA:3.20.20.70 13 357 3.6E-117 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_RS08520 ab15cd7be3a7bd57d481f42cce2227ab 358 SUPERFAMILY SSF51569 6 357 4.1E-125 T 11-11-2016 SHALO_RS08520 ab15cd7be3a7bd57d481f42cce2227ab 358 Pfam PF01116 Fructose-bisphosphate aldolase class-II 20 356 5.1E-87 T 11-11-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 SHALO_RS08520 ab15cd7be3a7bd57d481f42cce2227ab 358 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 16 357 3.4E-106 T 11-11-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 SHALO_RS02725 e24fff49ff03f373a3086180954977b8 392 SUPERFAMILY SSF103473 7 385 1.96E-49 T 11-11-2016 IPR020846 Major facilitator superfamily domain SHALO_RS02725 e24fff49ff03f373a3086180954977b8 392 Pfam PF07690 Major Facilitator Superfamily 19 348 2.1E-33 T 11-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SHALO_RS02725 e24fff49ff03f373a3086180954977b8 392 Gene3D G3DSA:1.20.1250.20 15 190 4.6E-26 T 11-11-2016 SHALO_RS02725 e24fff49ff03f373a3086180954977b8 392 Gene3D G3DSA:1.20.1250.20 207 386 1.5E-10 T 11-11-2016 SHALO_RS14470 90735d10b8f9b21d0fccfbd4fd70655c 455 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 352 451 8.1E-12 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS14470 90735d10b8f9b21d0fccfbd4fd70655c 455 PRINTS PR00344 Bacterial sensor protein C-terminal signature 414 432 1.4E-5 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS14470 90735d10b8f9b21d0fccfbd4fd70655c 455 PRINTS PR00344 Bacterial sensor protein C-terminal signature 403 413 1.4E-5 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS14470 90735d10b8f9b21d0fccfbd4fd70655c 455 PRINTS PR00344 Bacterial sensor protein C-terminal signature 437 450 1.4E-5 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS14470 90735d10b8f9b21d0fccfbd4fd70655c 455 Gene3D G3DSA:3.30.565.10 308 452 5.6E-26 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS14470 90735d10b8f9b21d0fccfbd4fd70655c 455 SMART SM00387 346 453 3.2E-19 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS14470 90735d10b8f9b21d0fccfbd4fd70655c 455 SUPERFAMILY SSF55874 309 450 5.24E-25 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS01340 48caccebcdf9020e49e0766682e18ff4 164 Pfam PF02108 Flagellar assembly protein FliH 43 157 2.4E-21 T 11-11-2016 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE SHALO_RS01340 48caccebcdf9020e49e0766682e18ff4 164 SUPERFAMILY SSF160527 68 158 8.11E-5 T 11-11-2016 SHALO_RS11135 442ec036d4bd9c23764dd07dcf59bff7 444 SUPERFAMILY SSF53383 39 442 2.24E-101 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase SHALO_RS11135 442ec036d4bd9c23764dd07dcf59bff7 444 Gene3D G3DSA:3.90.1150.10 309 437 2.8E-48 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SHALO_RS11135 442ec036d4bd9c23764dd07dcf59bff7 444 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 49 437 4.0E-94 T 11-11-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase SHALO_RS11135 442ec036d4bd9c23764dd07dcf59bff7 444 PIRSF PIRSF000390 19 443 4.6E-109 T 11-11-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase SHALO_RS11135 442ec036d4bd9c23764dd07dcf59bff7 444 Gene3D G3DSA:3.40.640.10 39 308 2.7E-74 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SHALO_RS04880 f4c04ebd8519e2a8a218b99da29d7e2e 553 SUPERFAMILY SSF55874 400 551 3.27E-30 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS04880 f4c04ebd8519e2a8a218b99da29d7e2e 553 PRINTS PR00344 Bacterial sensor protein C-terminal signature 514 532 1.4E-10 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS04880 f4c04ebd8519e2a8a218b99da29d7e2e 553 PRINTS PR00344 Bacterial sensor protein C-terminal signature 483 497 1.4E-10 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS04880 f4c04ebd8519e2a8a218b99da29d7e2e 553 PRINTS PR00344 Bacterial sensor protein C-terminal signature 538 551 1.4E-10 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS04880 f4c04ebd8519e2a8a218b99da29d7e2e 553 PRINTS PR00344 Bacterial sensor protein C-terminal signature 501 511 1.4E-10 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS04880 f4c04ebd8519e2a8a218b99da29d7e2e 553 SMART SM00387 442 553 9.0E-16 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS04880 f4c04ebd8519e2a8a218b99da29d7e2e 553 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 445 551 2.4E-15 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS04880 f4c04ebd8519e2a8a218b99da29d7e2e 553 SUPERFAMILY SSF47384 326 400 4.32E-6 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS04880 f4c04ebd8519e2a8a218b99da29d7e2e 553 Gene3D G3DSA:3.30.565.10 403 550 1.2E-31 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS10475 2a9b2ed6cd0d01547094d7c18ef86c13 102 Gene3D G3DSA:1.10.10.10 14 99 6.2E-20 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS10475 2a9b2ed6cd0d01547094d7c18ef86c13 102 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 53 68 1.1E-6 T 11-11-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SHALO_RS10475 2a9b2ed6cd0d01547094d7c18ef86c13 102 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 68 83 1.1E-6 T 11-11-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SHALO_RS10475 2a9b2ed6cd0d01547094d7c18ef86c13 102 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 20 35 1.1E-6 T 11-11-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SHALO_RS10475 2a9b2ed6cd0d01547094d7c18ef86c13 102 SUPERFAMILY SSF46785 14 98 1.82E-17 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS10475 2a9b2ed6cd0d01547094d7c18ef86c13 102 SMART SM00418 18 97 7.3E-10 T 11-11-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SHALO_RS10475 2a9b2ed6cd0d01547094d7c18ef86c13 102 Pfam PF12840 Helix-turn-helix domain 18 76 2.5E-8 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS14280 2eb12af27eab5111c9b267155a8c5388 393 PRINTS PR00344 Bacterial sensor protein C-terminal signature 326 340 2.2E-7 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS14280 2eb12af27eab5111c9b267155a8c5388 393 PRINTS PR00344 Bacterial sensor protein C-terminal signature 357 375 2.2E-7 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS14280 2eb12af27eab5111c9b267155a8c5388 393 PRINTS PR00344 Bacterial sensor protein C-terminal signature 381 393 2.2E-7 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS14280 2eb12af27eab5111c9b267155a8c5388 393 SMART SM00387 293 393 1.3E-12 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS14280 2eb12af27eab5111c9b267155a8c5388 393 SUPERFAMILY SSF47384 179 245 8.83E-7 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS14280 2eb12af27eab5111c9b267155a8c5388 393 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 295 391 1.5E-15 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS14280 2eb12af27eab5111c9b267155a8c5388 393 Gene3D G3DSA:3.30.565.10 252 392 8.1E-27 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS14280 2eb12af27eab5111c9b267155a8c5388 393 Gene3D G3DSA:1.10.287.130 185 243 5.9E-7 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS14280 2eb12af27eab5111c9b267155a8c5388 393 SUPERFAMILY SSF55874 255 393 3.67E-25 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS14280 2eb12af27eab5111c9b267155a8c5388 393 Pfam PF00512 His Kinase A (phospho-acceptor) domain 193 242 6.4E-7 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS14280 2eb12af27eab5111c9b267155a8c5388 393 SMART SM00388 191 251 0.0031 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS05440 3a3ab987cbe5aea82ffb65897599e328 457 Gene3D G3DSA:3.40.50.10420 185 281 3.0E-41 T 11-11-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain SHALO_RS05440 3a3ab987cbe5aea82ffb65897599e328 457 Gene3D G3DSA:3.40.50.10420 60 123 3.0E-41 T 11-11-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain SHALO_RS05440 3a3ab987cbe5aea82ffb65897599e328 457 SUPERFAMILY SSF100950 60 84 2.72E-34 T 11-11-2016 SHALO_RS05440 3a3ab987cbe5aea82ffb65897599e328 457 SUPERFAMILY SSF100950 130 285 2.72E-34 T 11-11-2016 SHALO_RS05440 3a3ab987cbe5aea82ffb65897599e328 457 Gene3D G3DSA:1.10.1060.10 284 382 3.1E-10 T 11-11-2016 SHALO_RS05440 3a3ab987cbe5aea82ffb65897599e328 457 SUPERFAMILY SSF54862 281 384 3.68E-14 T 11-11-2016 SHALO_RS05440 3a3ab987cbe5aea82ffb65897599e328 457 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 303 314 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_RS05440 3a3ab987cbe5aea82ffb65897599e328 457 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 352 363 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_RS05440 3a3ab987cbe5aea82ffb65897599e328 457 Pfam PF13183 4Fe-4S dicluster domain 301 366 2.7E-9 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_RS05440 3a3ab987cbe5aea82ffb65897599e328 457 Pfam PF02589 Uncharacterised ACR, YkgG family COG1556 65 282 2.7E-44 T 11-11-2016 IPR003741 LUD domain SHALO_RS09930 fe4f8af65bce0b28e89b484cbcf01f12 354 PIRSF PIRSF004640 1 354 1.3E-145 T 11-11-2016 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 SHALO_RS09930 fe4f8af65bce0b28e89b484cbcf01f12 354 SUPERFAMILY SSF56014 259 345 6.08E-9 T 11-11-2016 SHALO_RS09930 fe4f8af65bce0b28e89b484cbcf01f12 354 Gene3D G3DSA:3.20.20.70 33 126 1.4E-6 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_RS09930 fe4f8af65bce0b28e89b484cbcf01f12 354 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 2 350 34.068 T 11-11-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 SHALO_RS09930 fe4f8af65bce0b28e89b484cbcf01f12 354 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 4 345 5.2E-121 T 11-11-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 SHALO_RS09930 fe4f8af65bce0b28e89b484cbcf01f12 354 SUPERFAMILY SSF51717 13 207 3.06E-11 T 11-11-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 SHALO_RS09930 fe4f8af65bce0b28e89b484cbcf01f12 354 Pfam PF04551 GcpE protein 7 346 3.4E-132 T 11-11-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 SHALO_RS08495 0a9d9c00286f411b5f79afdb86904063 354 SUPERFAMILY SSF53850 146 230 7.97E-8 T 11-11-2016 SHALO_RS08495 0a9d9c00286f411b5f79afdb86904063 354 SUPERFAMILY SSF53850 73 107 7.97E-8 T 11-11-2016 SHALO_RS08495 0a9d9c00286f411b5f79afdb86904063 354 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 32 319 8.8E-55 T 11-11-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 SHALO_RS08495 0a9d9c00286f411b5f79afdb86904063 354 PIRSF PIRSF039026 1 354 6.5E-118 T 11-11-2016 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like SHALO_RS10110 2e6eeb66973f0609937607bda31120e5 75 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 47 5.0E-11 T 11-11-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 SHALO_RS10110 2e6eeb66973f0609937607bda31120e5 75 Pfam PF02599 Global regulator protein family 1 53 1.4E-19 T 11-11-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 SHALO_RS10110 2e6eeb66973f0609937607bda31120e5 75 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 64 2.6E-24 T 11-11-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 SHALO_RS10110 2e6eeb66973f0609937607bda31120e5 75 SUPERFAMILY SSF117130 1 54 3.53E-16 T 11-11-2016 SHALO_RS06800 4dfc05d7b6f090be9c5ba7cd732d6987 452 Gene3D G3DSA:1.10.579.10 270 450 1.4E-59 T 11-11-2016 SHALO_RS06800 4dfc05d7b6f090be9c5ba7cd732d6987 452 Gene3D G3DSA:3.40.50.620 2 133 5.2E-33 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHALO_RS06800 4dfc05d7b6f090be9c5ba7cd732d6987 452 SUPERFAMILY SSF48173 205 450 5.89E-82 T 11-11-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-1368108|Reactome: R-HSA-400253 SHALO_RS06800 4dfc05d7b6f090be9c5ba7cd732d6987 452 Gene3D G3DSA:1.25.40.80 134 148 1.1E-28 T 11-11-2016 SHALO_RS06800 4dfc05d7b6f090be9c5ba7cd732d6987 452 Gene3D G3DSA:1.25.40.80 194 269 1.1E-28 T 11-11-2016 SHALO_RS06800 4dfc05d7b6f090be9c5ba7cd732d6987 452 Pfam PF00875 DNA photolyase 4 148 4.0E-32 T 11-11-2016 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-1368108|Reactome: R-HSA-400253 SHALO_RS06800 4dfc05d7b6f090be9c5ba7cd732d6987 452 SUPERFAMILY SSF52425 4 153 1.07E-35 T 11-11-2016 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-1368108|Reactome: R-HSA-400253 SHALO_RS06800 4dfc05d7b6f090be9c5ba7cd732d6987 452 PRINTS PR00147 DNA photolyase signature 129 145 1.8E-20 T 11-11-2016 IPR002081 Cryptochrome/DNA photolyase class 1 SHALO_RS06800 4dfc05d7b6f090be9c5ba7cd732d6987 452 PRINTS PR00147 DNA photolyase signature 366 380 1.8E-20 T 11-11-2016 IPR002081 Cryptochrome/DNA photolyase class 1 SHALO_RS06800 4dfc05d7b6f090be9c5ba7cd732d6987 452 PRINTS PR00147 DNA photolyase signature 327 345 1.8E-20 T 11-11-2016 IPR002081 Cryptochrome/DNA photolyase class 1 SHALO_RS06800 4dfc05d7b6f090be9c5ba7cd732d6987 452 PRINTS PR00147 DNA photolyase signature 307 323 1.8E-20 T 11-11-2016 IPR002081 Cryptochrome/DNA photolyase class 1 SHALO_RS06800 4dfc05d7b6f090be9c5ba7cd732d6987 452 Pfam PF03441 FAD binding domain of DNA photolyase 261 448 1.5E-60 T 11-11-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-1368108|Reactome: R-HSA-400253 SHALO_RS04640 717fc0213c46acf77da60a1c0d0c244b 148 SMART SM00450 34 141 6.1E-5 T 11-11-2016 IPR001763 Rhodanese-like domain SHALO_RS04640 717fc0213c46acf77da60a1c0d0c244b 148 Gene3D G3DSA:3.40.250.10 25 137 5.7E-15 T 11-11-2016 IPR001763 Rhodanese-like domain SHALO_RS04640 717fc0213c46acf77da60a1c0d0c244b 148 SUPERFAMILY SSF52821 26 137 1.65E-13 T 11-11-2016 IPR001763 Rhodanese-like domain SHALO_RS04640 717fc0213c46acf77da60a1c0d0c244b 148 Pfam PF00581 Rhodanese-like domain 35 135 5.7E-8 T 11-11-2016 IPR001763 Rhodanese-like domain SHALO_RS00515 11fe867d3242034b33a3879b05a822b9 282 Pfam PF00849 RNA pseudouridylate synthase 59 206 1.5E-29 T 11-11-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 SHALO_RS00515 11fe867d3242034b33a3879b05a822b9 282 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 96 110 - T 11-11-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 SHALO_RS00515 11fe867d3242034b33a3879b05a822b9 282 SUPERFAMILY SSF55120 48 258 4.32E-47 T 11-11-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SHALO_RS09390 3d57484905652708fe4555c7df793a7c 643 Pfam PF00593 TonB dependent receptor 408 642 9.0E-19 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SHALO_RS09390 3d57484905652708fe4555c7df793a7c 643 Gene3D G3DSA:2.40.170.20 132 643 8.5E-70 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SHALO_RS09390 3d57484905652708fe4555c7df793a7c 643 Gene3D G3DSA:2.170.130.10 2 131 2.5E-28 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SHALO_RS09390 3d57484905652708fe4555c7df793a7c 643 SUPERFAMILY SSF56935 2 643 1.92E-103 T 11-11-2016 SHALO_RS09390 3d57484905652708fe4555c7df793a7c 643 Pfam PF07715 TonB-dependent Receptor Plug Domain 17 129 1.8E-12 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SHALO_RS09390 3d57484905652708fe4555c7df793a7c 643 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 626 643 - T 11-11-2016 IPR010917 TonB-dependent receptor, conserved site SHALO_RS02415 dfb97cc39aba8e4e3b929808ec66415d 141 Pfam PF00298 Ribosomal protein L11, RNA binding domain 71 139 6.8E-19 T 11-11-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 SHALO_RS02415 dfb97cc39aba8e4e3b929808ec66415d 141 Gene3D G3DSA:1.10.10.250 72 140 6.6E-24 T 11-11-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 SHALO_RS02415 dfb97cc39aba8e4e3b929808ec66415d 141 SUPERFAMILY SSF46906 67 139 1.22E-21 T 11-11-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 SHALO_RS02415 dfb97cc39aba8e4e3b929808ec66415d 141 SMART SM00649 9 140 8.9E-76 T 11-11-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 SHALO_RS02415 dfb97cc39aba8e4e3b929808ec66415d 141 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 141 28.742 T 11-11-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 SHALO_RS02415 dfb97cc39aba8e4e3b929808ec66415d 141 SUPERFAMILY SSF54747 3 71 1.31E-29 T 11-11-2016 IPR020784 Ribosomal protein L11, N-terminal SHALO_RS02415 dfb97cc39aba8e4e3b929808ec66415d 141 Gene3D G3DSA:3.30.1550.10 2 71 2.4E-37 T 11-11-2016 IPR020784 Ribosomal protein L11, N-terminal SHALO_RS02415 dfb97cc39aba8e4e3b929808ec66415d 141 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 6.8E-60 T 11-11-2016 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS02415 dfb97cc39aba8e4e3b929808ec66415d 141 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 73 4.0E-15 T 11-11-2016 SHALO_RS02415 dfb97cc39aba8e4e3b929808ec66415d 141 ProSitePatterns PS00359 Ribosomal protein L11 signature. 126 141 - T 11-11-2016 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_RS02415 dfb97cc39aba8e4e3b929808ec66415d 141 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 66 7.9E-30 T 11-11-2016 IPR020784 Ribosomal protein L11, N-terminal SHALO_RS09525 ecac0e143665f75e11123af35c003c1e 868 Pfam PF03924 CHASE domain 110 196 1.7E-13 T 11-11-2016 IPR006189 CHASE domain SHALO_RS09525 ecac0e143665f75e11123af35c003c1e 868 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 431 592 6.9E-47 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS09525 ecac0e143665f75e11123af35c003c1e 868 SMART SM00052 604 850 4.9E-115 T 11-11-2016 IPR001633 EAL domain SHALO_RS09525 ecac0e143665f75e11123af35c003c1e 868 Pfam PF00990 Diguanylate cyclase, GGDEF domain 435 590 6.5E-50 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS09525 ecac0e143665f75e11123af35c003c1e 868 Pfam PF08448 PAS fold 314 425 6.1E-17 T 11-11-2016 IPR013656 PAS fold-4 SHALO_RS09525 ecac0e143665f75e11123af35c003c1e 868 Gene3D G3DSA:3.20.20.450 607 857 5.5E-96 T 11-11-2016 IPR001633 EAL domain SHALO_RS09525 ecac0e143665f75e11123af35c003c1e 868 SUPERFAMILY SSF55785 313 425 6.63E-20 T 11-11-2016 IPR000014 PAS domain SHALO_RS09525 ecac0e143665f75e11123af35c003c1e 868 SUPERFAMILY SSF55073 439 596 9.42E-52 T 11-11-2016 IPR029787 Nucleotide cyclase SHALO_RS09525 ecac0e143665f75e11123af35c003c1e 868 SMART SM01079 63 225 7.3E-26 T 11-11-2016 IPR006189 CHASE domain SHALO_RS09525 ecac0e143665f75e11123af35c003c1e 868 Gene3D G3DSA:3.30.450.20 308 434 7.2E-19 T 11-11-2016 SHALO_RS09525 ecac0e143665f75e11123af35c003c1e 868 Pfam PF00563 EAL domain 610 845 1.5E-71 T 11-11-2016 IPR001633 EAL domain SHALO_RS09525 ecac0e143665f75e11123af35c003c1e 868 Gene3D G3DSA:3.30.70.270 435 600 8.4E-59 T 11-11-2016 SHALO_RS09525 ecac0e143665f75e11123af35c003c1e 868 SUPERFAMILY SSF141868 609 856 1.83E-90 T 11-11-2016 IPR001633 EAL domain SHALO_RS09525 ecac0e143665f75e11123af35c003c1e 868 SMART SM00267 423 594 4.1E-68 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS09525 ecac0e143665f75e11123af35c003c1e 868 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 309 429 1.7E-14 T 11-11-2016 IPR000014 PAS domain SHALO_RS09525 ecac0e143665f75e11123af35c003c1e 868 SMART SM00091 308 374 2.7E-9 T 11-11-2016 IPR000014 PAS domain SHALO_RS09265 531410da00e09670d72c743685973667 117 Pfam PF02254 TrkA-N domain 4 113 2.5E-20 T 11-11-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 SHALO_RS09265 531410da00e09670d72c743685973667 117 Gene3D G3DSA:3.40.50.720 2 113 5.2E-28 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS09265 531410da00e09670d72c743685973667 117 SUPERFAMILY SSF51735 3 113 5.04E-25 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS14855 d9d9970e8199dbce8ba7f08dbbdbb4ef 204 Gene3D G3DSA:2.60.120.10 5 143 2.2E-16 T 11-11-2016 IPR014710 RmlC-like jelly roll fold SHALO_RS14855 d9d9970e8199dbce8ba7f08dbbdbb4ef 204 SUPERFAMILY SSF46785 148 204 2.97E-10 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS14855 d9d9970e8199dbce8ba7f08dbbdbb4ef 204 Pfam PF13545 Crp-like helix-turn-helix domain 152 204 9.2E-10 T 11-11-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 SHALO_RS14855 d9d9970e8199dbce8ba7f08dbbdbb4ef 204 SUPERFAMILY SSF51206 4 144 1.2E-19 T 11-11-2016 IPR018490 Cyclic nucleotide-binding-like SHALO_RS14855 d9d9970e8199dbce8ba7f08dbbdbb4ef 204 Gene3D G3DSA:1.10.10.10 163 204 9.6E-13 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS14855 d9d9970e8199dbce8ba7f08dbbdbb4ef 204 SMART SM00419 156 204 8.1E-7 T 11-11-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 SHALO_RS01485 83c24d0d0ed1aed5d482b3851e72c78e 885 Gene3D G3DSA:3.40.50.10050 685 764 3.1E-23 T 11-11-2016 IPR023115 Translation initiation factor IF- 2, domain 3 SHALO_RS01485 83c24d0d0ed1aed5d482b3851e72c78e 885 Pfam PF11987 Translation-initiation factor 2 671 774 3.6E-35 T 11-11-2016 IPR023115 Translation initiation factor IF- 2, domain 3 SHALO_RS01485 83c24d0d0ed1aed5d482b3851e72c78e 885 Gene3D G3DSA:2.40.30.10 787 882 4.0E-35 T 11-11-2016 SHALO_RS01485 83c24d0d0ed1aed5d482b3851e72c78e 885 ProSitePatterns PS01176 Initiation factor 2 signature. 836 858 - T 11-11-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 SHALO_RS01485 83c24d0d0ed1aed5d482b3851e72c78e 885 Gene3D G3DSA:3.40.50.300 383 543 2.6E-48 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS01485 83c24d0d0ed1aed5d482b3851e72c78e 885 Pfam PF00009 Elongation factor Tu GTP binding domain 388 544 3.1E-35 T 11-11-2016 SHALO_RS01485 83c24d0d0ed1aed5d482b3851e72c78e 885 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 300 882 2.0E-252 T 11-11-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 SHALO_RS01485 83c24d0d0ed1aed5d482b3851e72c78e 885 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 305 354 2.5E-14 T 11-11-2016 IPR006847 Translation initiation factor IF-2, N-terminal SHALO_RS01485 83c24d0d0ed1aed5d482b3851e72c78e 885 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 1 49 1.8E-13 T 11-11-2016 IPR006847 Translation initiation factor IF-2, N-terminal SHALO_RS01485 83c24d0d0ed1aed5d482b3851e72c78e 885 SUPERFAMILY SSF50447 787 882 5.11E-30 T 11-11-2016 IPR009000 Translation protein, beta-barrel domain SHALO_RS01485 83c24d0d0ed1aed5d482b3851e72c78e 885 Gene3D G3DSA:2.40.30.10 555 648 1.7E-19 T 11-11-2016 SHALO_RS01485 83c24d0d0ed1aed5d482b3851e72c78e 885 SUPERFAMILY SSF52156 661 792 3.01E-34 T 11-11-2016 IPR023115 Translation initiation factor IF- 2, domain 3 SHALO_RS01485 83c24d0d0ed1aed5d482b3851e72c78e 885 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 387 543 7.3E-36 T 11-11-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SHALO_RS01485 83c24d0d0ed1aed5d482b3851e72c78e 885 PRINTS PR00449 Transforming protein P21 ras signature 426 448 4.4E-5 T 11-11-2016 SHALO_RS01485 83c24d0d0ed1aed5d482b3851e72c78e 885 PRINTS PR00449 Transforming protein P21 ras signature 387 408 4.4E-5 T 11-11-2016 SHALO_RS01485 83c24d0d0ed1aed5d482b3851e72c78e 885 PRINTS PR00449 Transforming protein P21 ras signature 525 547 4.4E-5 T 11-11-2016 SHALO_RS01485 83c24d0d0ed1aed5d482b3851e72c78e 885 PRINTS PR00449 Transforming protein P21 ras signature 484 497 4.4E-5 T 11-11-2016 SHALO_RS01485 83c24d0d0ed1aed5d482b3851e72c78e 885 SUPERFAMILY SSF52540 378 556 1.04E-52 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS01485 83c24d0d0ed1aed5d482b3851e72c78e 885 SUPERFAMILY SSF50447 557 639 1.69E-22 T 11-11-2016 IPR009000 Translation protein, beta-barrel domain SHALO_RS01485 83c24d0d0ed1aed5d482b3851e72c78e 885 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 883 16.653 T 11-11-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 SHALO_RS05350 e4bfafe2e61abd45896f204d90946c80 661 SUPERFAMILY SSF81665 260 355 4.32E-10 T 11-11-2016 SHALO_RS05350 e4bfafe2e61abd45896f204d90946c80 661 SUPERFAMILY SSF81665 604 653 4.32E-10 T 11-11-2016 SHALO_RS05350 e4bfafe2e61abd45896f204d90946c80 661 SUPERFAMILY SSF81665 110 163 4.32E-10 T 11-11-2016 SHALO_RS05350 e4bfafe2e61abd45896f204d90946c80 661 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 554 570 1.9E-5 T 11-11-2016 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 SHALO_RS05350 e4bfafe2e61abd45896f204d90946c80 661 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 586 611 1.9E-5 T 11-11-2016 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 SHALO_RS05350 e4bfafe2e61abd45896f204d90946c80 661 Gene3D G3DSA:3.40.1110.10 352 386 9.8E-4 T 11-11-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 SHALO_RS05350 e4bfafe2e61abd45896f204d90946c80 661 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 110 656 4.8E-166 T 11-11-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 SHALO_RS05350 e4bfafe2e61abd45896f204d90946c80 661 SUPERFAMILY SSF81653 172 259 7.45E-21 T 11-11-2016 SHALO_RS05350 e4bfafe2e61abd45896f204d90946c80 661 Pfam PF00122 E1-E2 ATPase 131 352 4.2E-57 T 11-11-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 SHALO_RS05350 e4bfafe2e61abd45896f204d90946c80 661 Gene3D G3DSA:2.70.150.10 121 260 1.1E-22 T 11-11-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 SHALO_RS05350 e4bfafe2e61abd45896f204d90946c80 661 Gene3D G3DSA:3.40.50.1000 477 625 1.0E-43 T 11-11-2016 IPR023214 HAD-like domain SHALO_RS05350 e4bfafe2e61abd45896f204d90946c80 661 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 361 375 3.9E-24 T 11-11-2016 SHALO_RS05350 e4bfafe2e61abd45896f204d90946c80 661 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 554 573 3.9E-24 T 11-11-2016 SHALO_RS05350 e4bfafe2e61abd45896f204d90946c80 661 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 578 590 3.9E-24 T 11-11-2016 SHALO_RS05350 e4bfafe2e61abd45896f204d90946c80 661 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 209 223 3.9E-24 T 11-11-2016 SHALO_RS05350 e4bfafe2e61abd45896f204d90946c80 661 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 475 486 3.9E-24 T 11-11-2016 SHALO_RS05350 e4bfafe2e61abd45896f204d90946c80 661 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 498 508 3.9E-24 T 11-11-2016 SHALO_RS05350 e4bfafe2e61abd45896f204d90946c80 661 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 131 634 6.4E-67 T 11-11-2016 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 SHALO_RS05350 e4bfafe2e61abd45896f204d90946c80 661 SUPERFAMILY SSF56784 359 379 1.1E-55 T 11-11-2016 IPR023214 HAD-like domain SHALO_RS05350 e4bfafe2e61abd45896f204d90946c80 661 SUPERFAMILY SSF56784 416 654 1.1E-55 T 11-11-2016 IPR023214 HAD-like domain SHALO_RS05350 e4bfafe2e61abd45896f204d90946c80 661 Pfam PF00702 haloacid dehalogenase-like hydrolase 357 568 7.0E-33 T 11-11-2016 SHALO_RS05350 e4bfafe2e61abd45896f204d90946c80 661 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 363 369 - T 11-11-2016 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 SHALO_RS05350 e4bfafe2e61abd45896f204d90946c80 661 Gene3D G3DSA:3.40.1110.10 387 476 8.1E-9 T 11-11-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 SHALO_RS05350 e4bfafe2e61abd45896f204d90946c80 661 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 110 658 2.6E-153 T 11-11-2016 SHALO_RS07850 00709e2ebc5fd93da889aa71411f8ae7 852 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 4 849 0.0 T 11-11-2016 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 SHALO_RS07850 00709e2ebc5fd93da889aa71411f8ae7 852 SUPERFAMILY SSF53732 369 848 2.09E-139 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 SHALO_RS07850 00709e2ebc5fd93da889aa71411f8ae7 852 SUPERFAMILY SSF52016 164 362 5.1E-54 T 11-11-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel SHALO_RS07850 00709e2ebc5fd93da889aa71411f8ae7 852 ProSitePatterns PS01244 Aconitase family signature 2. 756 769 - T 11-11-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 SHALO_RS07850 00709e2ebc5fd93da889aa71411f8ae7 852 Pfam PF11791 Aconitate B N-terminal domain 6 158 6.3E-62 T 11-11-2016 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 SHALO_RS07850 00709e2ebc5fd93da889aa71411f8ae7 852 Pfam PF06434 Aconitate hydratase 2 N-terminus 170 371 1.4E-89 T 11-11-2016 IPR015929 Aconitase B, N-terminal GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 SHALO_RS07850 00709e2ebc5fd93da889aa71411f8ae7 852 Gene3D G3DSA:3.20.19.10 164 350 1.1E-79 T 11-11-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel SHALO_RS07850 00709e2ebc5fd93da889aa71411f8ae7 852 SUPERFAMILY SSF74778 3 162 9.02E-60 T 11-11-2016 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 SHALO_RS07850 00709e2ebc5fd93da889aa71411f8ae7 852 Gene3D G3DSA:3.40.1060.10 511 673 2.4E-81 T 11-11-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 SHALO_RS07850 00709e2ebc5fd93da889aa71411f8ae7 852 Gene3D G3DSA:3.30.499.10 394 510 3.1E-57 T 11-11-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 SHALO_RS07850 00709e2ebc5fd93da889aa71411f8ae7 852 Gene3D G3DSA:3.30.499.10 674 848 2.3E-47 T 11-11-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 SHALO_RS07850 00709e2ebc5fd93da889aa71411f8ae7 852 PIRSF PIRSF036687 1 852 0.0 T 11-11-2016 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 SHALO_RS07850 00709e2ebc5fd93da889aa71411f8ae7 852 Pfam PF00330 Aconitase family (aconitate hydratase) 463 813 4.5E-43 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 SHALO_RS05740 031cef1a7afcb34073bab89132cdbce3 66 Pfam PF02597 ThiS family 9 65 6.3E-14 T 11-11-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 Reactome: R-HSA-947581 SHALO_RS05740 031cef1a7afcb34073bab89132cdbce3 66 SUPERFAMILY SSF54285 2 64 1.64E-15 T 11-11-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp SHALO_RS05740 031cef1a7afcb34073bab89132cdbce3 66 Gene3D G3DSA:3.10.20.30 1 65 1.3E-20 T 11-11-2016 IPR012675 Beta-grasp domain SHALO_RS05740 031cef1a7afcb34073bab89132cdbce3 66 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 4 65 1.0E-18 T 11-11-2016 IPR010035 ThiS, thiamine-biosynthesis SHALO_RS01875 ab0e3ed6214aceaa9013921af96583d4 76 SUPERFAMILY SSF47598 4 43 1.73E-6 T 11-11-2016 IPR010985 Ribbon-helix-helix GO:0006355 SHALO_RS01875 ab0e3ed6214aceaa9013921af96583d4 76 Pfam PF01402 Ribbon-helix-helix protein, copG family 5 39 9.9E-7 T 11-11-2016 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 SHALO_RS02855 ac443a4c28158a1bd938e28e8281abb2 277 SMART SM00892 63 262 5.7E-47 T 11-11-2016 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 SHALO_RS02855 ac443a4c28158a1bd938e28e8281abb2 277 Gene3D G3DSA:3.40.570.10 58 276 6.3E-49 T 11-11-2016 IPR020821 Extracellular Endonuclease, subunit A GO:0003676|GO:0016787|GO:0046872 SHALO_RS02855 ac443a4c28158a1bd938e28e8281abb2 277 Pfam PF01223 DNA/RNA non-specific endonuclease 61 261 6.2E-35 T 11-11-2016 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 SHALO_RS02855 ac443a4c28158a1bd938e28e8281abb2 277 SMART SM00477 64 262 2.8E-35 T 11-11-2016 IPR020821 Extracellular Endonuclease, subunit A GO:0003676|GO:0016787|GO:0046872 SHALO_RS02855 ac443a4c28158a1bd938e28e8281abb2 277 SUPERFAMILY SSF54060 57 271 1.24E-49 T 11-11-2016 SHALO_RS08505 571aee797d966bada94ca9fa08c7a522 313 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 157 9.7E-31 T 11-11-2016 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 SHALO_RS08505 571aee797d966bada94ca9fa08c7a522 313 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 308 5.3E-68 T 11-11-2016 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0015940|GO:0016491|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 SHALO_RS08505 571aee797d966bada94ca9fa08c7a522 313 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 186 306 1.8E-25 T 11-11-2016 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 SHALO_RS08505 571aee797d966bada94ca9fa08c7a522 313 Gene3D G3DSA:1.10.1040.10 195 308 5.7E-29 T 11-11-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 SHALO_RS08505 571aee797d966bada94ca9fa08c7a522 313 SUPERFAMILY SSF51735 1 191 4.6E-13 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS08505 571aee797d966bada94ca9fa08c7a522 313 Gene3D G3DSA:3.40.50.720 1 194 2.2E-41 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS08505 571aee797d966bada94ca9fa08c7a522 313 SUPERFAMILY SSF48179 186 307 2.99E-23 T 11-11-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SHALO_RS04475 07c3295702fa65ac5885162b8e8786d0 478 PIRSF PIRSF002457 1 478 2.3E-134 T 11-11-2016 IPR030676 Citrate carrier CitT-related SHALO_RS04475 07c3295702fa65ac5885162b8e8786d0 478 Pfam PF00939 Sodium:sulfate symporter transmembrane region 10 477 1.5E-125 T 11-11-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 SHALO_RS04475 07c3295702fa65ac5885162b8e8786d0 478 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 25 472 1.2E-116 T 11-11-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 SHALO_RS13935 e8f554b1011d1435df5d6d1229267277 196 PRINTS PR00127 Clp protease catalytic subunit P signature 20 35 4.4E-54 T 11-11-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SHALO_RS13935 e8f554b1011d1435df5d6d1229267277 196 PRINTS PR00127 Clp protease catalytic subunit P signature 91 108 4.4E-54 T 11-11-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SHALO_RS13935 e8f554b1011d1435df5d6d1229267277 196 PRINTS PR00127 Clp protease catalytic subunit P signature 112 131 4.4E-54 T 11-11-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SHALO_RS13935 e8f554b1011d1435df5d6d1229267277 196 PRINTS PR00127 Clp protease catalytic subunit P signature 169 188 4.4E-54 T 11-11-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SHALO_RS13935 e8f554b1011d1435df5d6d1229267277 196 PRINTS PR00127 Clp protease catalytic subunit P signature 60 80 4.4E-54 T 11-11-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SHALO_RS13935 e8f554b1011d1435df5d6d1229267277 196 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 113 126 - T 11-11-2016 IPR033135 ClpP, histidine active site SHALO_RS13935 e8f554b1011d1435df5d6d1229267277 196 SUPERFAMILY SSF52096 12 192 1.12E-70 T 11-11-2016 IPR029045 ClpP/crotonase-like domain SHALO_RS13935 e8f554b1011d1435df5d6d1229267277 196 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 4 193 1.8E-105 T 11-11-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SHALO_RS13935 e8f554b1011d1435df5d6d1229267277 196 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 91 102 - T 11-11-2016 IPR018215 ClpP, Ser active site SHALO_RS13935 e8f554b1011d1435df5d6d1229267277 196 Pfam PF00574 Clp protease 14 193 9.0E-86 T 11-11-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA SHALO_RS13935 e8f554b1011d1435df5d6d1229267277 196 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 4 194 43.362 T 11-11-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SHALO_RS13935 e8f554b1011d1435df5d6d1229267277 196 Gene3D G3DSA:3.90.226.10 5 192 2.1E-86 T 11-11-2016 IPR029045 ClpP/crotonase-like domain SHALO_RS06830 a98f458ec41b75f48e2cf21fb1f30d01 178 Gene3D G3DSA:3.40.920.10 1 175 3.3E-24 T 11-11-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 SHALO_RS06830 a98f458ec41b75f48e2cf21fb1f30d01 178 SUPERFAMILY SSF53323 1 175 1.83E-24 T 11-11-2016 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 SHALO_RS06830 a98f458ec41b75f48e2cf21fb1f30d01 178 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 11 171 2.4E-27 T 11-11-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 SHALO_RS05835 66724e361ab01a6bdf29da782c9aa9cc 405 Gene3D G3DSA:3.30.565.10 254 402 1.3E-31 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS05835 66724e361ab01a6bdf29da782c9aa9cc 405 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 298 404 5.1E-18 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS05835 66724e361ab01a6bdf29da782c9aa9cc 405 SUPERFAMILY SSF47384 169 252 8.04E-6 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS05835 66724e361ab01a6bdf29da782c9aa9cc 405 SMART SM00387 294 405 1.9E-17 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS05835 66724e361ab01a6bdf29da782c9aa9cc 405 PRINTS PR00344 Bacterial sensor protein C-terminal signature 335 349 3.8E-14 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS05835 66724e361ab01a6bdf29da782c9aa9cc 405 PRINTS PR00344 Bacterial sensor protein C-terminal signature 366 384 3.8E-14 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS05835 66724e361ab01a6bdf29da782c9aa9cc 405 PRINTS PR00344 Bacterial sensor protein C-terminal signature 353 363 3.8E-14 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS05835 66724e361ab01a6bdf29da782c9aa9cc 405 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 403 3.8E-14 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS05835 66724e361ab01a6bdf29da782c9aa9cc 405 SUPERFAMILY SSF55874 254 402 3.93E-30 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS03395 15e653f131247662d8bf6a1e6dc543aa 305 Pfam PF02911 Formyl transferase, C-terminal domain 202 296 4.2E-18 T 11-11-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SHALO_RS03395 15e653f131247662d8bf6a1e6dc543aa 305 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 1 301 4.5E-74 T 11-11-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 SHALO_RS03395 15e653f131247662d8bf6a1e6dc543aa 305 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 1 299 30.106 T 11-11-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 SHALO_RS03395 15e653f131247662d8bf6a1e6dc543aa 305 Gene3D G3DSA:3.10.25.10 205 304 5.1E-18 T 11-11-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SHALO_RS03395 15e653f131247662d8bf6a1e6dc543aa 305 SUPERFAMILY SSF53328 1 204 2.09E-50 T 11-11-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SHALO_RS03395 15e653f131247662d8bf6a1e6dc543aa 305 Gene3D G3DSA:3.40.50.170 1 203 1.7E-53 T 11-11-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SHALO_RS03395 15e653f131247662d8bf6a1e6dc543aa 305 Pfam PF00551 Formyl transferase 1 177 1.7E-35 T 11-11-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SHALO_RS03395 15e653f131247662d8bf6a1e6dc543aa 305 SUPERFAMILY SSF50486 203 304 3.14E-20 T 11-11-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 SHALO_RS06290 591a2e7d358a18599a364ad665ff8f96 374 SUPERFAMILY SSF55073 219 373 3.06E-46 T 11-11-2016 IPR029787 Nucleotide cyclase SHALO_RS06290 591a2e7d358a18599a364ad665ff8f96 374 Pfam PF00990 Diguanylate cyclase, GGDEF domain 214 371 2.2E-46 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS06290 591a2e7d358a18599a364ad665ff8f96 374 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 210 373 9.6E-52 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS06290 591a2e7d358a18599a364ad665ff8f96 374 Gene3D G3DSA:3.30.70.270 215 374 2.5E-51 T 11-11-2016 SHALO_RS06290 591a2e7d358a18599a364ad665ff8f96 374 SMART SM00267 203 374 3.0E-56 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS07525 487ece0709cf8849631647223b98152e 177 SUPERFAMILY SSF69118 1 174 3.48E-33 T 11-11-2016 IPR029032 AhpD-like Reactome: R-HSA-5628897 SHALO_RS07525 487ece0709cf8849631647223b98152e 177 Gene3D G3DSA:1.20.1290.10 1 94 3.6E-21 T 11-11-2016 IPR029032 AhpD-like Reactome: R-HSA-5628897 SHALO_RS07525 487ece0709cf8849631647223b98152e 177 Gene3D G3DSA:1.20.1290.10 147 173 3.6E-21 T 11-11-2016 IPR029032 AhpD-like Reactome: R-HSA-5628897 SHALO_RS07525 487ece0709cf8849631647223b98152e 177 Pfam PF02627 Carboxymuconolactone decarboxylase family 56 120 2.3E-7 T 11-11-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 SHALO_RS07525 487ece0709cf8849631647223b98152e 177 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 61 107 2.5E-17 T 11-11-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 SHALO_RS01635 f28296d2ebbb2a203442957531880703 417 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 6 410 6.3E-127 T 11-11-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 SHALO_RS01635 f28296d2ebbb2a203442957531880703 417 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 2 412 25.854 T 11-11-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 SHALO_RS01635 f28296d2ebbb2a203442957531880703 417 Pfam PF13742 OB-fold nucleic acid binding domain 5 97 4.2E-29 T 11-11-2016 IPR025824 OB-fold nucleic acid binding domain GO:0003676 SHALO_RS01635 f28296d2ebbb2a203442957531880703 417 Pfam PF02601 Exonuclease VII, large subunit 121 381 4.6E-72 T 11-11-2016 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 SHALO_RS05555 32a22f69a124f06051ee096ecd0f1fb6 275 ProSitePatterns PS00761 Signal peptidases I signature 3. 215 228 - T 11-11-2016 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 SHALO_RS05555 32a22f69a124f06051ee096ecd0f1fb6 275 Pfam PF00717 Peptidase S24-like 35 125 7.9E-17 T 11-11-2016 IPR019759 Peptidase S24/S26A/S26B SHALO_RS05555 32a22f69a124f06051ee096ecd0f1fb6 275 SUPERFAMILY SSF51306 27 264 3.71E-56 T 11-11-2016 IPR015927 Peptidase S24/S26A/S26B/S26C SHALO_RS05555 32a22f69a124f06051ee096ecd0f1fb6 275 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 17 250 4.6E-39 T 11-11-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SHALO_RS05555 32a22f69a124f06051ee096ecd0f1fb6 275 Gene3D G3DSA:2.10.109.10 26 115 1.2E-47 T 11-11-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain SHALO_RS05555 32a22f69a124f06051ee096ecd0f1fb6 275 Gene3D G3DSA:2.10.109.10 210 257 1.2E-47 T 11-11-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain SHALO_RS05555 32a22f69a124f06051ee096ecd0f1fb6 275 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 210 229 1.9E-15 T 11-11-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SHALO_RS05555 32a22f69a124f06051ee096ecd0f1fb6 275 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 105 117 1.9E-15 T 11-11-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SHALO_RS05555 32a22f69a124f06051ee096ecd0f1fb6 275 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 28 44 1.9E-15 T 11-11-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SHALO_RS08850 beebdcf4563455f1db97e176521943d7 857 Gene3D G3DSA:1.10.8.60 344 427 5.5E-33 T 11-11-2016 SHALO_RS08850 beebdcf4563455f1db97e176521943d7 857 Gene3D G3DSA:3.40.50.300 553 775 3.0E-58 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS08850 beebdcf4563455f1db97e176521943d7 857 Pfam PF07724 AAA domain (Cdc48 subfamily) 599 759 4.9E-55 T 11-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SHALO_RS08850 beebdcf4563455f1db97e176521943d7 857 SUPERFAMILY SSF52540 549 852 6.92E-78 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS08850 beebdcf4563455f1db97e176521943d7 857 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 204 316 2.1E-15 T 11-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SHALO_RS08850 beebdcf4563455f1db97e176521943d7 857 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 765 844 1.2E-22 T 11-11-2016 IPR019489 Clp ATPase, C-terminal SHALO_RS08850 beebdcf4563455f1db97e176521943d7 857 SUPERFAMILY SSF81923 6 156 1.22E-27 T 11-11-2016 IPR004176 Clp, N-terminal GO:0019538 SHALO_RS08850 beebdcf4563455f1db97e176521943d7 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 711 725 3.8E-41 T 11-11-2016 IPR001270 ClpA/B family GO:0005524 SHALO_RS08850 beebdcf4563455f1db97e176521943d7 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 604 622 3.8E-41 T 11-11-2016 IPR001270 ClpA/B family GO:0005524 SHALO_RS08850 beebdcf4563455f1db97e176521943d7 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 649 667 3.8E-41 T 11-11-2016 IPR001270 ClpA/B family GO:0005524 SHALO_RS08850 beebdcf4563455f1db97e176521943d7 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 678 696 3.8E-41 T 11-11-2016 IPR001270 ClpA/B family GO:0005524 SHALO_RS08850 beebdcf4563455f1db97e176521943d7 857 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 11-11-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 SHALO_RS08850 beebdcf4563455f1db97e176521943d7 857 Gene3D G3DSA:1.10.8.60 776 855 3.0E-27 T 11-11-2016 SHALO_RS08850 beebdcf4563455f1db97e176521943d7 857 Gene3D G3DSA:1.10.1780.10 5 149 2.2E-28 T 11-11-2016 IPR004176 Clp, N-terminal GO:0019538 SHALO_RS08850 beebdcf4563455f1db97e176521943d7 857 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 634 652 - T 11-11-2016 IPR028299 ClpA/B, conserved site 2 SHALO_RS08850 beebdcf4563455f1db97e176521943d7 857 Gene3D G3DSA:3.40.50.300 160 342 5.0E-48 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS08850 beebdcf4563455f1db97e176521943d7 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 97 146 0.0046 T 11-11-2016 IPR004176 Clp, N-terminal GO:0019538 SHALO_RS08850 beebdcf4563455f1db97e176521943d7 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 21 69 0.006 T 11-11-2016 IPR004176 Clp, N-terminal GO:0019538 SHALO_RS08850 beebdcf4563455f1db97e176521943d7 857 SUPERFAMILY SSF52540 160 548 1.66E-90 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS08850 beebdcf4563455f1db97e176521943d7 857 SMART SM01086 765 854 1.8E-31 T 11-11-2016 IPR019489 Clp ATPase, C-terminal SHALO_RS08850 beebdcf4563455f1db97e176521943d7 857 SMART SM00382 199 344 3.5E-11 T 11-11-2016 IPR003593 AAA+ ATPase domain SHALO_RS08850 beebdcf4563455f1db97e176521943d7 857 SMART SM00382 600 747 3.8E-11 T 11-11-2016 IPR003593 AAA+ ATPase domain SHALO_RS06495 4936416894a7eb91d71b6baacfdd47bd 681 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 559 665 3.7E-13 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS06495 4936416894a7eb91d71b6baacfdd47bd 681 SMART SM00387 555 668 2.4E-16 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS06495 4936416894a7eb91d71b6baacfdd47bd 681 SMART SM01204 219 348 7.6E-29 T 11-11-2016 IPR019494 FIST, C-domain SHALO_RS06495 4936416894a7eb91d71b6baacfdd47bd 681 SMART SM00897 26 218 2.8E-28 T 11-11-2016 IPR013702 FIST domain, N-terminal SHALO_RS06495 4936416894a7eb91d71b6baacfdd47bd 681 PRINTS PR00344 Bacterial sensor protein C-terminal signature 598 612 6.5E-5 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS06495 4936416894a7eb91d71b6baacfdd47bd 681 PRINTS PR00344 Bacterial sensor protein C-terminal signature 616 626 6.5E-5 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS06495 4936416894a7eb91d71b6baacfdd47bd 681 PRINTS PR00344 Bacterial sensor protein C-terminal signature 628 646 6.5E-5 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS06495 4936416894a7eb91d71b6baacfdd47bd 681 Pfam PF08495 FIST N domain 31 216 1.6E-25 T 11-11-2016 IPR013702 FIST domain, N-terminal SHALO_RS06495 4936416894a7eb91d71b6baacfdd47bd 681 SUPERFAMILY SSF47384 440 514 1.31E-7 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS06495 4936416894a7eb91d71b6baacfdd47bd 681 Pfam PF10442 FIST C domain 220 347 1.6E-20 T 11-11-2016 IPR019494 FIST, C-domain SHALO_RS06495 4936416894a7eb91d71b6baacfdd47bd 681 SUPERFAMILY SSF55874 512 668 1.2E-23 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS06495 4936416894a7eb91d71b6baacfdd47bd 681 Gene3D G3DSA:3.30.565.10 517 667 5.1E-25 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS09740 98936acd793379d7c15a42509419ebf6 638 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 7 60 3.9E-19 T 11-11-2016 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 SHALO_RS09740 98936acd793379d7c15a42509419ebf6 638 Gene3D G3DSA:3.40.50.980 244 412 3.2E-30 T 11-11-2016 SHALO_RS09740 98936acd793379d7c15a42509419ebf6 638 Pfam PF13193 AMP-binding enzyme C-terminal domain 512 591 2.3E-23 T 11-11-2016 IPR025110 AMP-binding enzyme C-terminal domain SHALO_RS09740 98936acd793379d7c15a42509419ebf6 638 Gene3D G3DSA:3.40.50.980 59 243 2.1E-38 T 11-11-2016 SHALO_RS09740 98936acd793379d7c15a42509419ebf6 638 Gene3D G3DSA:3.30.300.30 500 604 4.8E-24 T 11-11-2016 SHALO_RS09740 98936acd793379d7c15a42509419ebf6 638 Gene3D G3DSA:2.30.38.10 419 497 6.5E-12 T 11-11-2016 SHALO_RS09740 98936acd793379d7c15a42509419ebf6 638 Pfam PF00501 AMP-binding enzyme 69 503 8.0E-85 T 11-11-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 SHALO_RS09740 98936acd793379d7c15a42509419ebf6 638 ProSitePatterns PS00455 Putative AMP-binding domain signature. 239 250 - T 11-11-2016 IPR020845 AMP-binding, conserved site SHALO_RS09740 98936acd793379d7c15a42509419ebf6 638 SUPERFAMILY SSF56801 7 619 3.79E-160 T 11-11-2016 SHALO_RS13495 968e21985dff535761dd689f0ee6f370 543 SMART SM00387 407 529 4.6E-16 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS13495 968e21985dff535761dd689f0ee6f370 543 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 410 509 2.9E-16 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS13495 968e21985dff535761dd689f0ee6f370 543 PRINTS PR00344 Bacterial sensor protein C-terminal signature 449 463 6.8E-8 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS13495 968e21985dff535761dd689f0ee6f370 543 PRINTS PR00344 Bacterial sensor protein C-terminal signature 480 498 6.8E-8 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS13495 968e21985dff535761dd689f0ee6f370 543 PRINTS PR00344 Bacterial sensor protein C-terminal signature 467 477 6.8E-8 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS13495 968e21985dff535761dd689f0ee6f370 543 SUPERFAMILY SSF55874 367 527 2.75E-28 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS13495 968e21985dff535761dd689f0ee6f370 543 SUPERFAMILY SSF47384 292 363 1.0E-5 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS13495 968e21985dff535761dd689f0ee6f370 543 Gene3D G3DSA:3.30.565.10 368 526 4.3E-31 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS01935 ba1ccc41dd350de4dc1fa67dcd1fabe5 239 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 22 234 3.3E-29 T 11-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SHALO_RS01935 ba1ccc41dd350de4dc1fa67dcd1fabe5 239 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 204 230 - T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SHALO_RS01935 ba1ccc41dd350de4dc1fa67dcd1fabe5 239 Pfam PF04542 Sigma-70 region 2 25 95 2.1E-9 T 11-11-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SHALO_RS01935 ba1ccc41dd350de4dc1fa67dcd1fabe5 239 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 25 234 2.5E-59 T 11-11-2016 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 SHALO_RS01935 ba1ccc41dd350de4dc1fa67dcd1fabe5 239 PRINTS PR00046 Major sigma-70 factor signature 204 219 3.3E-6 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SHALO_RS01935 ba1ccc41dd350de4dc1fa67dcd1fabe5 239 PRINTS PR00046 Major sigma-70 factor signature 219 230 3.3E-6 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SHALO_RS01935 ba1ccc41dd350de4dc1fa67dcd1fabe5 239 PRINTS PR00046 Major sigma-70 factor signature 96 109 3.3E-6 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SHALO_RS01935 ba1ccc41dd350de4dc1fa67dcd1fabe5 239 PRINTS PR00046 Major sigma-70 factor signature 187 199 3.3E-6 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SHALO_RS01935 ba1ccc41dd350de4dc1fa67dcd1fabe5 239 Pfam PF04545 Sigma-70, region 4 184 232 3.7E-16 T 11-11-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SHALO_RS01935 ba1ccc41dd350de4dc1fa67dcd1fabe5 239 SUPERFAMILY SSF88946 21 96 1.26E-15 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SHALO_RS01935 ba1ccc41dd350de4dc1fa67dcd1fabe5 239 Gene3D G3DSA:1.10.10.10 171 235 2.2E-11 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS01935 ba1ccc41dd350de4dc1fa67dcd1fabe5 239 SUPERFAMILY SSF88659 165 234 2.24E-17 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SHALO_RS01935 ba1ccc41dd350de4dc1fa67dcd1fabe5 239 SUPERFAMILY SSF88659 99 159 3.92E-6 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SHALO_RS11735 0b341e379eae2ffaf16bab6c54031a10 434 Gene3D G3DSA:1.20.1250.20 2 125 1.6E-21 T 11-11-2016 SHALO_RS11735 0b341e379eae2ffaf16bab6c54031a10 434 Pfam PF07690 Major Facilitator Superfamily 2 334 5.8E-39 T 11-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SHALO_RS11735 0b341e379eae2ffaf16bab6c54031a10 434 PRINTS PR01036 Tetracycline resistance protein TetB signature 64 88 3.9E-6 T 11-11-2016 SHALO_RS11735 0b341e379eae2ffaf16bab6c54031a10 434 PRINTS PR01036 Tetracycline resistance protein TetB signature 2 24 3.9E-6 T 11-11-2016 SHALO_RS11735 0b341e379eae2ffaf16bab6c54031a10 434 PRINTS PR01036 Tetracycline resistance protein TetB signature 326 345 3.9E-6 T 11-11-2016 SHALO_RS11735 0b341e379eae2ffaf16bab6c54031a10 434 Gene3D G3DSA:1.20.1250.20 189 346 2.1E-15 T 11-11-2016 SHALO_RS11735 0b341e379eae2ffaf16bab6c54031a10 434 Gene3D G3DSA:1.20.1250.20 398 426 2.1E-15 T 11-11-2016 SHALO_RS11735 0b341e379eae2ffaf16bab6c54031a10 434 SUPERFAMILY SSF103473 397 426 3.14E-53 T 11-11-2016 IPR020846 Major facilitator superfamily domain SHALO_RS11735 0b341e379eae2ffaf16bab6c54031a10 434 SUPERFAMILY SSF103473 173 345 3.14E-53 T 11-11-2016 IPR020846 Major facilitator superfamily domain SHALO_RS11735 0b341e379eae2ffaf16bab6c54031a10 434 SUPERFAMILY SSF103473 2 123 3.14E-53 T 11-11-2016 IPR020846 Major facilitator superfamily domain SHALO_RS00230 12bc398922d3b3ba00e68d789b256450 180 Pfam PF01871 AMMECR1 7 178 1.8E-41 T 11-11-2016 IPR002733 AMMECR1 domain SHALO_RS00230 12bc398922d3b3ba00e68d789b256450 180 SUPERFAMILY SSF143447 3 180 5.76E-52 T 11-11-2016 IPR002733 AMMECR1 domain SHALO_RS00230 12bc398922d3b3ba00e68d789b256450 180 TIGRFAM TIGR00296 TIGR00296: uncharacterized protein, PH0010 family 7 174 2.2E-31 T 11-11-2016 IPR023473 AMMECR1 SHALO_RS00230 12bc398922d3b3ba00e68d789b256450 180 TIGRFAM TIGR04335 AmmeMemoSam_A: AmmeMemoRadiSam system protein A 4 178 2.8E-58 T 11-11-2016 IPR027623 AmmeMemoRadiSam system protein A SHALO_RS00230 12bc398922d3b3ba00e68d789b256450 180 Gene3D G3DSA:3.30.700.20 3 120 1.3E-33 T 11-11-2016 IPR027485 AMMECR1, N-terminal SHALO_RS00230 12bc398922d3b3ba00e68d789b256450 180 Gene3D G3DSA:3.30.1490.150 121 174 3.1E-20 T 11-11-2016 SHALO_RS05775 02cca9b3ef8f9fe257f6ac8ba9c8afed 516 Gene3D G3DSA:1.10.3210.10 312 491 3.7E-37 T 11-11-2016 IPR006674 HD domain SHALO_RS05775 02cca9b3ef8f9fe257f6ac8ba9c8afed 516 SUPERFAMILY SSF109604 309 468 3.81E-29 T 11-11-2016 SHALO_RS05775 02cca9b3ef8f9fe257f6ac8ba9c8afed 516 Pfam PF01966 HD domain 334 424 2.5E-17 T 11-11-2016 IPR006674 HD domain SHALO_RS05775 02cca9b3ef8f9fe257f6ac8ba9c8afed 516 TIGRFAM TIGR00277 HDIG: HDIG domain 328 405 3.3E-22 T 11-11-2016 IPR006675 HDIG domain SHALO_RS05775 02cca9b3ef8f9fe257f6ac8ba9c8afed 516 Pfam PF12072 Domain of unknown function (DUF3552) 13 200 8.3E-14 T 11-11-2016 IPR022711 Ribonuclease Y, N-terminal SHALO_RS05775 02cca9b3ef8f9fe257f6ac8ba9c8afed 516 Gene3D G3DSA:3.30.1370.10 216 271 4.2E-6 T 11-11-2016 IPR004088 K Homology domain, type 1 GO:0003723 SHALO_RS05775 02cca9b3ef8f9fe257f6ac8ba9c8afed 516 Hamap MF_00335 Ribonuclease Y [rny]. 3 516 22.493 T 11-11-2016 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 SHALO_RS05775 02cca9b3ef8f9fe257f6ac8ba9c8afed 516 SUPERFAMILY SSF54791 205 301 8.3E-13 T 11-11-2016 IPR004088 K Homology domain, type 1 GO:0003723 SHALO_RS05775 02cca9b3ef8f9fe257f6ac8ba9c8afed 516 TIGRFAM TIGR03319 RNase_Y: ribonuclease Y 15 516 7.8E-179 T 11-11-2016 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 SHALO_RS05775 02cca9b3ef8f9fe257f6ac8ba9c8afed 516 SMART SM00322 204 271 0.0092 T 11-11-2016 IPR004087 K Homology domain GO:0003676 SHALO_RS05775 02cca9b3ef8f9fe257f6ac8ba9c8afed 516 SMART SM00471 328 434 3.6E-12 T 11-11-2016 IPR003607 HD/PDEase domain SHALO_RS09895 177361108922207a2159ae57f7245de4 320 TIGRFAM TIGR00383 corA: magnesium and cobalt transport protein CorA 6 320 2.5E-71 T 11-11-2016 IPR004488 Magnesium/cobalt transport protein CorA GO:0006824|GO:0015087|GO:0015095|GO:0015693|GO:0016020 SHALO_RS09895 177361108922207a2159ae57f7245de4 320 SUPERFAMILY SSF144083 255 318 1.44E-20 T 11-11-2016 SHALO_RS09895 177361108922207a2159ae57f7245de4 320 SUPERFAMILY SSF143865 1 259 7.72E-38 T 11-11-2016 SHALO_RS09895 177361108922207a2159ae57f7245de4 320 Gene3D G3DSA:1.20.58.340 245 320 3.4E-26 T 11-11-2016 SHALO_RS09895 177361108922207a2159ae57f7245de4 320 Pfam PF01544 CorA-like Mg2+ transporter protein 30 316 3.3E-55 T 11-11-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 SHALO_RS10795 7ed534258ca8d2e2b93df4f339e4c21d 374 Hamap MF_01520 Bifunctional enzyme IspD/IspF [ispDF]. 2 369 34.903 T 11-11-2016 IPR026596 Bifunctional enzyme IspD/IspF KEGG: 00900+4.6.1.12+2.7.7.60|MetaCyc: PWY-7560 SHALO_RS10795 7ed534258ca8d2e2b93df4f339e4c21d 374 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 6 202 8.1E-56 T 11-11-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 SHALO_RS10795 7ed534258ca8d2e2b93df4f339e4c21d 374 SUPERFAMILY SSF69765 213 371 2.09E-55 T 11-11-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 SHALO_RS10795 7ed534258ca8d2e2b93df4f339e4c21d 374 Gene3D G3DSA:3.90.550.10 4 203 1.0E-56 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases SHALO_RS10795 7ed534258ca8d2e2b93df4f339e4c21d 374 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 6 201 3.7E-34 T 11-11-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 SHALO_RS10795 7ed534258ca8d2e2b93df4f339e4c21d 374 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 213 368 30.42 T 11-11-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 SHALO_RS10795 7ed534258ca8d2e2b93df4f339e4c21d 374 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 247 262 - T 11-11-2016 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 SHALO_RS10795 7ed534258ca8d2e2b93df4f339e4c21d 374 Pfam PF02542 YgbB family 214 366 7.8E-54 T 11-11-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 SHALO_RS10795 7ed534258ca8d2e2b93df4f339e4c21d 374 SUPERFAMILY SSF53448 4 202 1.99E-45 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases SHALO_RS10795 7ed534258ca8d2e2b93df4f339e4c21d 374 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 215 366 3.2E-52 T 11-11-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 SHALO_RS10795 7ed534258ca8d2e2b93df4f339e4c21d 374 Gene3D G3DSA:3.30.1330.50 212 368 6.0E-59 T 11-11-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 SHALO_RS09245 d2f362b4fadb42351a3b129e0861ae4b 617 Gene3D G3DSA:2.40.170.20 130 617 5.3E-61 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SHALO_RS09245 d2f362b4fadb42351a3b129e0861ae4b 617 Pfam PF07715 TonB-dependent Receptor Plug Domain 23 130 9.1E-17 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SHALO_RS09245 d2f362b4fadb42351a3b129e0861ae4b 617 Gene3D G3DSA:2.170.130.10 9 129 1.8E-23 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SHALO_RS09245 d2f362b4fadb42351a3b129e0861ae4b 617 SUPERFAMILY SSF56935 9 617 5.29E-85 T 11-11-2016 SHALO_RS07605 d5dcf7a57a1edbfadd40833c33f8a483 494 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 6 486 2.0E-156 T 11-11-2016 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 SHALO_RS07605 d5dcf7a57a1edbfadd40833c33f8a483 494 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 6 231 1.4E-30 T 11-11-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain SHALO_RS07605 d5dcf7a57a1edbfadd40833c33f8a483 494 SUPERFAMILY SSF52540 1 230 6.31E-53 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS07605 d5dcf7a57a1edbfadd40833c33f8a483 494 Gene3D G3DSA:3.40.50.880 252 449 6.8E-34 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like SHALO_RS07605 d5dcf7a57a1edbfadd40833c33f8a483 494 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 494 165.922 T 11-11-2016 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 SHALO_RS07605 d5dcf7a57a1edbfadd40833c33f8a483 494 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 252 439 3.8E-54 T 11-11-2016 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 SHALO_RS07605 d5dcf7a57a1edbfadd40833c33f8a483 494 Gene3D G3DSA:3.40.50.300 3 235 1.4E-46 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS07605 d5dcf7a57a1edbfadd40833c33f8a483 494 SUPERFAMILY SSF52317 192 431 1.12E-35 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like SHALO_RS11370 bd7ef9cef34841ab976b7933e2805d5d 225 SUPERFAMILY SSF52172 9 179 9.25E-36 T 11-11-2016 IPR011006 CheY-like superfamily SHALO_RS11370 bd7ef9cef34841ab976b7933e2805d5d 225 Gene3D G3DSA:1.10.10.10 153 223 1.1E-11 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS11370 bd7ef9cef34841ab976b7933e2805d5d 225 SMART SM00862 153 223 1.9E-9 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS11370 bd7ef9cef34841ab976b7933e2805d5d 225 SMART SM00448 11 122 2.6E-29 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS11370 bd7ef9cef34841ab976b7933e2805d5d 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 223 2.1E-9 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS11370 bd7ef9cef34841ab976b7933e2805d5d 225 Pfam PF00072 Response regulator receiver domain 13 122 8.6E-26 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS11370 bd7ef9cef34841ab976b7933e2805d5d 225 Gene3D G3DSA:3.40.50.2300 9 152 8.3E-35 T 11-11-2016 SHALO_RS11020 51d94d3f4bcd0c4c7b4dcb8aaad1d104 165 Pfam PF01202 Shikimate kinase 1 158 6.2E-28 T 11-11-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 SHALO_RS11020 51d94d3f4bcd0c4c7b4dcb8aaad1d104 165 Gene3D G3DSA:3.40.50.300 1 159 1.6E-40 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS11020 51d94d3f4bcd0c4c7b4dcb8aaad1d104 165 SUPERFAMILY SSF52540 1 158 6.2E-17 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS11020 51d94d3f4bcd0c4c7b4dcb8aaad1d104 165 Hamap MF_00109 Shikimate kinase [aroK]. 1 159 17.134 T 11-11-2016 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 SHALO_RS11020 51d94d3f4bcd0c4c7b4dcb8aaad1d104 165 PRINTS PR01100 Shikimate kinase family signature 47 55 4.0E-10 T 11-11-2016 SHALO_RS11020 51d94d3f4bcd0c4c7b4dcb8aaad1d104 165 PRINTS PR01100 Shikimate kinase family signature 66 75 4.0E-10 T 11-11-2016 SHALO_RS11020 51d94d3f4bcd0c4c7b4dcb8aaad1d104 165 PRINTS PR01100 Shikimate kinase family signature 19 32 4.0E-10 T 11-11-2016 SHALO_RS11020 51d94d3f4bcd0c4c7b4dcb8aaad1d104 165 PRINTS PR01100 Shikimate kinase family signature 83 100 4.0E-10 T 11-11-2016 SHALO_RS02890 aca82aae708c4c21ae80c9c89d996217 332 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 145 163 2.0E-33 T 11-11-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 SHALO_RS02890 aca82aae708c4c21ae80c9c89d996217 332 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 172 188 2.0E-33 T 11-11-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 SHALO_RS02890 aca82aae708c4c21ae80c9c89d996217 332 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 110 123 2.0E-33 T 11-11-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 SHALO_RS02890 aca82aae708c4c21ae80c9c89d996217 332 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 229 246 2.0E-33 T 11-11-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 SHALO_RS02890 aca82aae708c4c21ae80c9c89d996217 332 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 269 284 2.0E-33 T 11-11-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 SHALO_RS02890 aca82aae708c4c21ae80c9c89d996217 332 PIRSF PIRSF000149 1 332 3.2E-130 T 11-11-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 SHALO_RS02890 aca82aae708c4c21ae80c9c89d996217 332 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 4 151 5.6E-52 T 11-11-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 SHALO_RS02890 aca82aae708c4c21ae80c9c89d996217 332 SUPERFAMILY SSF51735 1 178 3.76E-54 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS02890 aca82aae708c4c21ae80c9c89d996217 332 SMART SM00846 3 151 5.5E-68 T 11-11-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 SHALO_RS02890 aca82aae708c4c21ae80c9c89d996217 332 SUPERFAMILY SSF55347 151 314 1.09E-68 T 11-11-2016 SHALO_RS02890 aca82aae708c4c21ae80c9c89d996217 332 Gene3D G3DSA:3.40.50.720 1 159 1.6E-63 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS02890 aca82aae708c4c21ae80c9c89d996217 332 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 325 5.7E-128 T 11-11-2016 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SHALO_RS02890 aca82aae708c4c21ae80c9c89d996217 332 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 156 313 3.7E-65 T 11-11-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 SHALO_RS02890 aca82aae708c4c21ae80c9c89d996217 332 Gene3D G3DSA:3.30.360.10 160 315 1.1E-72 T 11-11-2016 SHALO_RS02890 aca82aae708c4c21ae80c9c89d996217 332 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 149 156 - T 11-11-2016 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 SHALO_RS13080 9465bf03df7858e11617a294b8c6dbb5 206 Gene3D G3DSA:1.10.530.10 17 67 1.0E-12 T 11-11-2016 SHALO_RS13080 9465bf03df7858e11617a294b8c6dbb5 206 Gene3D G3DSA:1.10.530.10 115 171 1.0E-12 T 11-11-2016 SHALO_RS13080 9465bf03df7858e11617a294b8c6dbb5 206 Pfam PF01464 Transglycosylase SLT domain 27 171 1.9E-14 T 11-11-2016 IPR008258 Transglycosylase SLT domain 1 SHALO_RS13080 9465bf03df7858e11617a294b8c6dbb5 206 SUPERFAMILY SSF53955 112 190 2.51E-19 T 11-11-2016 IPR023346 Lysozyme-like domain SHALO_RS13080 9465bf03df7858e11617a294b8c6dbb5 206 SUPERFAMILY SSF53955 26 61 2.51E-19 T 11-11-2016 IPR023346 Lysozyme-like domain SHALO_RS08205 01a56e0aa3c6d4833353e8f990f5652b 267 PIRSF PIRSF006661 1 265 1.2E-90 T 11-11-2016 IPR005232 Conserved hypothetical protein CHP00268 SHALO_RS08205 01a56e0aa3c6d4833353e8f990f5652b 267 Gene3D G3DSA:3.40.50.620 12 167 2.1E-25 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHALO_RS08205 01a56e0aa3c6d4833353e8f990f5652b 267 TIGRFAM TIGR00268 TIGR00268: TIGR00268 family protein 4 256 2.1E-73 T 11-11-2016 IPR005232 Conserved hypothetical protein CHP00268 SHALO_RS08205 01a56e0aa3c6d4833353e8f990f5652b 267 SUPERFAMILY SSF52402 18 199 4.41E-32 T 11-11-2016 SHALO_RS00165 4e2b5f2b9b1fa9133508cf06b39cd555 622 SMART SM00283 346 621 3.9E-29 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SHALO_RS00165 4e2b5f2b9b1fa9133508cf06b39cd555 622 Gene3D G3DSA:3.30.450.20 145 265 2.3E-20 T 11-11-2016 SHALO_RS00165 4e2b5f2b9b1fa9133508cf06b39cd555 622 SMART SM00304 291 345 5.4E-6 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SHALO_RS00165 4e2b5f2b9b1fa9133508cf06b39cd555 622 Gene3D G3DSA:1.10.287.950 374 610 2.4E-39 T 11-11-2016 SHALO_RS00165 4e2b5f2b9b1fa9133508cf06b39cd555 622 SUPERFAMILY SSF58104 313 622 1.14E-53 T 11-11-2016 SHALO_RS00165 4e2b5f2b9b1fa9133508cf06b39cd555 622 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 438 620 3.0E-36 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SHALO_RS00165 4e2b5f2b9b1fa9133508cf06b39cd555 622 Pfam PF02743 Cache domain 37 252 2.2E-16 T 11-11-2016 IPR033479 Double Cache domain 1 SHALO_RS00165 4e2b5f2b9b1fa9133508cf06b39cd555 622 Pfam PF00672 HAMP domain 272 341 2.1E-8 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SHALO_RS04455 5fd1ea27edd799e4e9c4d87e42e0978a 750 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 338 522 2.9E-53 T 11-11-2016 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 SHALO_RS04455 5fd1ea27edd799e4e9c4d87e42e0978a 750 SUPERFAMILY SSF50715 337 542 2.41E-62 T 11-11-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 SHALO_RS04455 5fd1ea27edd799e4e9c4d87e42e0978a 750 Pfam PF02637 GatB domain 605 747 9.7E-41 T 11-11-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 SHALO_RS04455 5fd1ea27edd799e4e9c4d87e42e0978a 750 SUPERFAMILY SSF52374 10 334 2.17E-90 T 11-11-2016 SHALO_RS04455 5fd1ea27edd799e4e9c4d87e42e0978a 750 SUPERFAMILY SSF89095 636 747 4.88E-19 T 11-11-2016 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 SHALO_RS04455 5fd1ea27edd799e4e9c4d87e42e0978a 750 Gene3D G3DSA:2.40.240.10 345 458 3.8E-43 T 11-11-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: R-HSA-2408517|Reactome: R-HSA-379716 SHALO_RS04455 5fd1ea27edd799e4e9c4d87e42e0978a 750 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 25 545 3.0E-210 T 11-11-2016 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 SHALO_RS04455 5fd1ea27edd799e4e9c4d87e42e0978a 750 Gene3D G3DSA:2.40.240.10 459 541 1.7E-26 T 11-11-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: R-HSA-2408517|Reactome: R-HSA-379716 SHALO_RS04455 5fd1ea27edd799e4e9c4d87e42e0978a 750 Gene3D G3DSA:3.40.50.620 208 253 2.4E-39 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHALO_RS04455 5fd1ea27edd799e4e9c4d87e42e0978a 750 Gene3D G3DSA:3.40.50.620 24 92 2.4E-39 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHALO_RS04455 5fd1ea27edd799e4e9c4d87e42e0978a 750 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 30 41 - T 11-11-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 SHALO_RS04455 5fd1ea27edd799e4e9c4d87e42e0978a 750 SMART SM00845 604 747 5.0E-56 T 11-11-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 SHALO_RS04455 5fd1ea27edd799e4e9c4d87e42e0978a 750 Gene3D G3DSA:1.10.1160.10 258 335 1.1E-34 T 11-11-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 SHALO_RS04455 5fd1ea27edd799e4e9c4d87e42e0978a 750 Gene3D G3DSA:3.90.800.10 97 205 8.7E-41 T 11-11-2016 SHALO_RS04455 5fd1ea27edd799e4e9c4d87e42e0978a 750 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 24 334 9.7E-102 T 11-11-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 SHALO_RS04455 5fd1ea27edd799e4e9c4d87e42e0978a 750 PRINTS PR00987 Glutamyl-tRNA synthetase signature 27 39 8.0E-8 T 11-11-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 SHALO_RS04455 5fd1ea27edd799e4e9c4d87e42e0978a 750 PRINTS PR00987 Glutamyl-tRNA synthetase signature 56 69 8.0E-8 T 11-11-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 SHALO_RS04455 5fd1ea27edd799e4e9c4d87e42e0978a 750 PRINTS PR00987 Glutamyl-tRNA synthetase signature 206 216 8.0E-8 T 11-11-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 SHALO_RS04455 5fd1ea27edd799e4e9c4d87e42e0978a 750 PRINTS PR00987 Glutamyl-tRNA synthetase signature 41 52 8.0E-8 T 11-11-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 SHALO_RS04455 5fd1ea27edd799e4e9c4d87e42e0978a 750 SUPERFAMILY SSF89095 577 675 1.92E-17 T 11-11-2016 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 SHALO_RS10945 47f96a6996eb3a05f353b4b625f7ce4d 202 Pfam PF01810 LysE type translocator 16 199 6.9E-29 T 11-11-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 SHALO_RS13305 8290f8e95699d470796ee851fb3d9ea5 260 Gene3D G3DSA:3.40.140.10 123 259 9.2E-46 T 11-11-2016 SHALO_RS13305 8290f8e95699d470796ee851fb3d9ea5 260 Gene3D G3DSA:3.10.20.10 27 108 3.8E-18 T 11-11-2016 SHALO_RS13305 8290f8e95699d470796ee851fb3d9ea5 260 SUPERFAMILY SSF53927 4 258 7.52E-69 T 11-11-2016 IPR016193 Cytidine deaminase-like GO:0003824 SHALO_RS13305 8290f8e95699d470796ee851fb3d9ea5 260 PIRSF PIRSF015626 2 260 6.0E-80 T 11-11-2016 IPR003786 Protein FdhD GO:0016783 SHALO_RS13305 8290f8e95699d470796ee851fb3d9ea5 260 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 21 259 1.3E-56 T 11-11-2016 IPR003786 Protein FdhD GO:0016783 SHALO_RS13305 8290f8e95699d470796ee851fb3d9ea5 260 Pfam PF02634 FdhD/NarQ family 25 259 1.2E-72 T 11-11-2016 IPR003786 Protein FdhD GO:0016783 SHALO_RS13305 8290f8e95699d470796ee851fb3d9ea5 260 Hamap MF_00187 Sulfurtransferase FdhD [fdhD]. 2 259 28.449 T 11-11-2016 IPR003786 Protein FdhD GO:0016783 SHALO_RS00020 c6a690bdf94c1ba536d220a36de119ad 471 SMART SM00052 223 465 2.3E-32 T 11-11-2016 IPR001633 EAL domain SHALO_RS00020 c6a690bdf94c1ba536d220a36de119ad 471 SMART SM00267 58 230 8.6E-4 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS00020 c6a690bdf94c1ba536d220a36de119ad 471 Gene3D G3DSA:3.20.20.450 231 466 9.8E-48 T 11-11-2016 IPR001633 EAL domain SHALO_RS00020 c6a690bdf94c1ba536d220a36de119ad 471 SUPERFAMILY SSF55073 85 199 1.33E-8 T 11-11-2016 IPR029787 Nucleotide cyclase SHALO_RS00020 c6a690bdf94c1ba536d220a36de119ad 471 Gene3D G3DSA:3.30.70.270 71 205 6.5E-11 T 11-11-2016 SHALO_RS00020 c6a690bdf94c1ba536d220a36de119ad 471 Pfam PF00990 Diguanylate cyclase, GGDEF domain 78 207 3.0E-11 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS00020 c6a690bdf94c1ba536d220a36de119ad 471 Pfam PF00563 EAL domain 231 460 8.4E-49 T 11-11-2016 IPR001633 EAL domain SHALO_RS00020 c6a690bdf94c1ba536d220a36de119ad 471 SUPERFAMILY SSF141868 231 466 2.22E-48 T 11-11-2016 IPR001633 EAL domain SHALO_RS10320 3fc8b5c76543f74ede0300e4a5db5850 730 SUPERFAMILY SSF47384 489 564 7.46E-5 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS10320 3fc8b5c76543f74ede0300e4a5db5850 730 SUPERFAMILY SSF55785 359 475 3.43E-15 T 11-11-2016 IPR000014 PAS domain SHALO_RS10320 3fc8b5c76543f74ede0300e4a5db5850 730 PRINTS PR00344 Bacterial sensor protein C-terminal signature 681 699 1.1E-6 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS10320 3fc8b5c76543f74ede0300e4a5db5850 730 PRINTS PR00344 Bacterial sensor protein C-terminal signature 652 666 1.1E-6 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS10320 3fc8b5c76543f74ede0300e4a5db5850 730 PRINTS PR00344 Bacterial sensor protein C-terminal signature 670 680 1.1E-6 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS10320 3fc8b5c76543f74ede0300e4a5db5850 730 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 380 481 2.4E-7 T 11-11-2016 IPR000014 PAS domain SHALO_RS10320 3fc8b5c76543f74ede0300e4a5db5850 730 Gene3D G3DSA:3.30.450.20 361 475 3.0E-11 T 11-11-2016 SHALO_RS10320 3fc8b5c76543f74ede0300e4a5db5850 730 Gene3D G3DSA:3.40.50.2300 149 289 5.3E-7 T 11-11-2016 SHALO_RS10320 3fc8b5c76543f74ede0300e4a5db5850 730 Pfam PF13426 PAS domain 388 476 4.6E-6 T 11-11-2016 IPR000014 PAS domain SHALO_RS10320 3fc8b5c76543f74ede0300e4a5db5850 730 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 609 720 9.0E-17 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS10320 3fc8b5c76543f74ede0300e4a5db5850 730 SMART SM00387 607 721 7.5E-21 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS10320 3fc8b5c76543f74ede0300e4a5db5850 730 SMART SM00091 374 440 4.5E-5 T 11-11-2016 IPR000014 PAS domain SHALO_RS10320 3fc8b5c76543f74ede0300e4a5db5850 730 Gene3D G3DSA:3.30.565.10 566 719 4.1E-29 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS10320 3fc8b5c76543f74ede0300e4a5db5850 730 SUPERFAMILY SSF55874 564 719 3.41E-28 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS14615 dd4c2c0ab62b8b91125d2c7353b9908d 353 SUPERFAMILY SSF51569 10 299 1.71E-86 T 11-11-2016 SHALO_RS14615 dd4c2c0ab62b8b91125d2c7353b9908d 353 SUPERFAMILY SSF51269 285 344 8.79E-18 T 11-11-2016 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal Reactome: R-HSA-4085001 SHALO_RS14615 dd4c2c0ab62b8b91125d2c7353b9908d 353 Pfam PF03102 NeuB family 34 271 3.1E-94 T 11-11-2016 IPR013132 N-acetylneuraminic acid synthase, N-terminal GO:0016051 Reactome: R-HSA-4085001 SHALO_RS14615 dd4c2c0ab62b8b91125d2c7353b9908d 353 Gene3D G3DSA:3.20.20.70 10 271 1.3E-104 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_RS14615 dd4c2c0ab62b8b91125d2c7353b9908d 353 TIGRFAM TIGR03586 PseI: pseudaminic acid synthase 13 339 7.8E-153 T 11-11-2016 IPR020030 Pseudaminic acid biosynthesis, PseI KEGG: 00520+2.5.1.97|MetaCyc: PWY-6143 SHALO_RS14615 dd4c2c0ab62b8b91125d2c7353b9908d 353 Gene3D G3DSA:3.90.1210.10 288 344 8.3E-25 T 11-11-2016 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal Reactome: R-HSA-4085001 SHALO_RS14615 dd4c2c0ab62b8b91125d2c7353b9908d 353 Pfam PF08666 SAF domain 288 344 1.6E-7 T 11-11-2016 IPR013974 SAF domain Reactome: R-HSA-4085001 SHALO_RS14615 dd4c2c0ab62b8b91125d2c7353b9908d 353 SMART SM00858 287 345 2.9E-5 T 11-11-2016 IPR013974 SAF domain Reactome: R-HSA-4085001 SHALO_RS09495 56c5e57fe5e97ea5a41621e6776195ad 557 SMART SM00471 237 371 1.4E-10 T 11-11-2016 IPR003607 HD/PDEase domain SHALO_RS09495 56c5e57fe5e97ea5a41621e6776195ad 557 Gene3D G3DSA:1.10.3210.10 229 403 1.3E-22 T 11-11-2016 IPR006674 HD domain SHALO_RS09495 56c5e57fe5e97ea5a41621e6776195ad 557 Pfam PF01966 HD domain 242 362 1.8E-18 T 11-11-2016 IPR006674 HD domain SHALO_RS09495 56c5e57fe5e97ea5a41621e6776195ad 557 SUPERFAMILY SSF109604 217 400 2.15E-39 T 11-11-2016 SHALO_RS09495 56c5e57fe5e97ea5a41621e6776195ad 557 SUPERFAMILY SSF55073 431 536 1.02E-9 T 11-11-2016 IPR029787 Nucleotide cyclase SHALO_RS09495 56c5e57fe5e97ea5a41621e6776195ad 557 Pfam PF11845 Protein of unknown function (DUF3365) 21 165 7.5E-7 T 11-11-2016 IPR021796 Protein of unknown function DUF3365 SHALO_RS09495 56c5e57fe5e97ea5a41621e6776195ad 557 Gene3D G3DSA:3.30.70.270 428 527 1.6E-8 T 11-11-2016 SHALO_RS09495 56c5e57fe5e97ea5a41621e6776195ad 557 Pfam PF00990 Diguanylate cyclase, GGDEF domain 427 517 5.3E-8 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS12860 bec394d4e7403b9384980c22a4d107fc 113 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 2 111 1.5E-24 T 11-11-2016 IPR006504 Transcriptional regulator Spx/MgsR SHALO_RS12860 bec394d4e7403b9384980c22a4d107fc 113 Pfam PF03960 ArsC family 49 110 1.3E-11 T 11-11-2016 IPR006660 Arsenate reductase-like SHALO_RS12860 bec394d4e7403b9384980c22a4d107fc 113 SUPERFAMILY SSF52833 1 111 4.41E-24 T 11-11-2016 IPR012336 Thioredoxin-like fold SHALO_RS12860 bec394d4e7403b9384980c22a4d107fc 113 Gene3D G3DSA:3.40.30.10 1 112 3.3E-29 T 11-11-2016 IPR012336 Thioredoxin-like fold SHALO_RS06195 6931bf3f10c51ac16be5fd89428a7870 256 Gene3D G3DSA:3.40.710.10 19 255 3.7E-75 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like SHALO_RS06195 6931bf3f10c51ac16be5fd89428a7870 256 Pfam PF00905 Penicillin binding protein transpeptidase domain 48 234 1.4E-33 T 11-11-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 SHALO_RS06195 6931bf3f10c51ac16be5fd89428a7870 256 SUPERFAMILY SSF56601 20 230 3.59E-32 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like SHALO_RS06195 6931bf3f10c51ac16be5fd89428a7870 256 ProSitePatterns PS00337 Beta-lactamase class-D active site. 59 69 - T 11-11-2016 IPR002137 Beta-lactamase, class-D active site GO:0008800|GO:0017001 KEGG: 00311+3.5.2.6 SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 SUPERFAMILY SSF51120 1302 1418 4.71E-10 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 2095 2113 - T 11-11-2016 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1888 1906 - T 11-11-2016 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 578 596 - T 11-11-2016 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 SUPERFAMILY SSF51120 419 496 2.09E-11 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 771 789 - T 11-11-2016 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 2441 2459 - T 11-11-2016 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1780 1798 - T 11-11-2016 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 SUPERFAMILY SSF51120 1720 1820 7.85E-18 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 SUPERFAMILY SSF51120 764 889 1.36E-14 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 2432 2450 - T 11-11-2016 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 SUPERFAMILY SSF51120 1407 1498 5.89E-9 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 SUPERFAMILY SSF51120 2342 2425 3.14E-9 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 2708 2726 - T 11-11-2016 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1879 1897 - T 11-11-2016 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 SUPERFAMILY SSF51120 2872 2945 2.79E-14 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 SUPERFAMILY SSF51120 605 754 5.75E-9 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 SUPERFAMILY SSF51120 905 1071 2.02E-24 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 SUPERFAMILY SSF51120 1170 1327 1.57E-20 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1005 1023 - T 11-11-2016 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1023 1041 - T 11-11-2016 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 SUPERFAMILY SSF51120 1048 1183 7.72E-8 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 SUPERFAMILY SSF51120 1923 2037 1.96E-11 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 Gene3D G3DSA:2.150.10.10 2041 2153 1.6E-35 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 Gene3D G3DSA:2.150.10.10 1961 2007 1.6E-35 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 Gene3D G3DSA:2.150.10.10 2786 2831 4.3E-23 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 Gene3D G3DSA:2.150.10.10 1360 1507 2.8E-13 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 Gene3D G3DSA:2.150.10.10 906 1076 9.6E-22 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 Gene3D G3DSA:2.150.10.10 1254 1357 1.1E-13 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 Gene3D G3DSA:2.150.10.10 2952 3112 2.7E-12 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 Gene3D G3DSA:2.150.10.10 1078 1233 1.5E-12 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 Gene3D G3DSA:2.150.10.10 2865 2945 4.3E-23 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 Gene3D G3DSA:2.150.10.10 2297 2422 2.0E-15 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 Gene3D G3DSA:2.150.10.10 657 733 3.3E-13 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 Gene3D G3DSA:2.150.10.10 514 637 4.6E-13 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 Gene3D G3DSA:2.150.10.10 2535 2679 7.9E-20 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 Gene3D G3DSA:2.150.10.10 418 492 8.0E-10 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 Gene3D G3DSA:2.150.10.10 1760 1940 7.1E-29 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 Gene3D G3DSA:2.150.10.10 2166 2274 4.4E-12 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 Gene3D G3DSA:2.150.10.10 2427 2534 9.7E-19 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 Gene3D G3DSA:2.150.10.10 3453 3650 1.3E-19 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 Gene3D G3DSA:2.150.10.10 1524 1699 1.0E-19 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 Gene3D G3DSA:2.150.10.10 768 821 3.3E-13 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 2077 2095 - T 11-11-2016 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 SUPERFAMILY SSF51120 1518 1712 3.21E-25 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 2068 2086 - T 11-11-2016 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1620 1638 - T 11-11-2016 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 SUPERFAMILY SSF51120 2159 2242 1.83E-12 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2590 2607 2.7 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1189 1206 13.0 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2306 2323 0.081 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 3811 3819 52.0 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 3039 3055 4.5 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 3569 3583 12.0 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 685 700 0.34 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1742 1758 0.014 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1981 1997 11.0 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2472 2488 0.071 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1382 1398 41.0 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2814 2830 1.2 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1444 1456 41.0 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2684 2701 5.7 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 4055 4066 31.0 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2610 2625 0.0069 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1008 1025 0.0047 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 3480 3497 1.1 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1724 1740 35.0 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2214 2230 0.0025 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 3463 3479 0.32 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1096 1111 3.1 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2090 2106 0.17 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 451 468 0.072 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2796 2812 7.7 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1624 1640 0.033 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2436 2452 0.12 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2072 2088 0.33 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2730 2746 0.057 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 3509 3519 15.0 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1258 1274 0.48 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2895 2912 0.034 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 470 486 9.0 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 3397 3409 32.0 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2397 2413 0.062 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2326 2337 45.0 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1774 1791 0.06 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1026 1041 2.8 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2923 2939 0.16 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 3557 3568 3.0 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1170 1184 12.0 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2956 2968 4.6 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 3237 3249 0.081 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 716 730 44.0 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1611 1622 54.0 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 4028 4044 3.6 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2453 2470 0.16 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 4011 4026 47.0 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2703 2719 0.26 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 847 863 7.6 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 573 589 0.23 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1882 1899 0.05 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1962 1979 0.44 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1793 1809 0.06 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2125 2141 8.0 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1276 1292 0.31 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 906 919 4.6 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1293 1310 0.032 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2492 2506 0.33 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2196 2212 10.0 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1641 1658 0.13 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2572 2589 0.036 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1864 1881 0.72 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 591 603 12.0 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2045 2061 2.7 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 768 782 0.088 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2107 2123 0.016 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 SUPERFAMILY SSF51120 2764 2849 5.23E-11 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 SUPERFAMILY SSF51120 2955 3114 2.09E-11 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 2919 2937 - T 11-11-2016 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 SUPERFAMILY SSF51120 3129 3256 5.93E-6 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 2210 2228 - T 11-11-2016 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1762 1780 - T 11-11-2016 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 2726 2744 - T 11-11-2016 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 1036 1057 3.4E-5 T 11-11-2016 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 1775 1796 3.4E-5 T 11-11-2016 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1771 1789 - T 11-11-2016 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 2901 2919 - T 11-11-2016 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 SUPERFAMILY SSF51120 2247 2336 6.41E-10 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 2219 2237 - T 11-11-2016 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 SUPERFAMILY SSF51120 2493 2650 4.41E-19 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 2810 2828 - T 11-11-2016 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 SUPERFAMILY SSF51120 3237 3412 2.62E-8 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 2104 2122 - T 11-11-2016 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 PRINTS PR00313 NodO calcium binding signature 573 581 2.1E-6 T 11-11-2016 SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 PRINTS PR00313 NodO calcium binding signature 591 599 2.1E-6 T 11-11-2016 SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 PRINTS PR00313 NodO calcium binding signature 693 702 2.1E-6 T 11-11-2016 SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 PRINTS PR00313 NodO calcium binding signature 458 469 2.1E-6 T 11-11-2016 SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 2578 2596 - T 11-11-2016 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 SUPERFAMILY SSF51120 3365 3547 9.94E-17 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 SUPERFAMILY SSF51120 2609 2765 3.4E-21 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 SUPERFAMILY SSF51120 1823 1946 1.57E-15 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 SUPERFAMILY SSF51120 3509 3643 2.09E-7 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 SUPERFAMILY SSF51120 519 649 8.72E-14 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 SUPERFAMILY SSF51120 2031 2172 3.98E-21 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 SUPERFAMILY SSF51120 3916 4102 1.16E-5 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1014 1032 - T 11-11-2016 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_RS13005 2eba0646a27f28c803d230d953a28d96 4176 SUPERFAMILY SSF51120 2429 2513 6.28E-16 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_RS06020 c64cce9052862a2fcaa5a1d4e37f4eba 370 Pfam PF00682 HMGL-like 2 239 3.8E-66 T 11-11-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 SHALO_RS06020 c64cce9052862a2fcaa5a1d4e37f4eba 370 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 187 200 - T 11-11-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 SHALO_RS06020 c64cce9052862a2fcaa5a1d4e37f4eba 370 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 8 24 - T 11-11-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 SHALO_RS06020 c64cce9052862a2fcaa5a1d4e37f4eba 370 TIGRFAM TIGR02660 nifV_homocitr: homocitrate synthase 2 364 3.6E-144 T 11-11-2016 IPR013477 Homocitrate synthase NifV-type GO:0004410|GO:0051188 KEGG: 00300+2.3.3.14|KEGG: 00620+2.3.3.14|MetaCyc: PWY-3081|MetaCyc: PWY-7710 SHALO_RS06020 c64cce9052862a2fcaa5a1d4e37f4eba 370 Gene3D G3DSA:3.20.20.70 2 331 1.2E-91 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_RS06020 c64cce9052862a2fcaa5a1d4e37f4eba 370 SUPERFAMILY SSF51569 2 276 7.51E-69 T 11-11-2016 SHALO_RS14085 e192e438307e53ceca7d8ee288a2e1de 304 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 222 238 - T 11-11-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site SHALO_RS14085 e192e438307e53ceca7d8ee288a2e1de 304 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 193 215 - T 11-11-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site SHALO_RS14085 e192e438307e53ceca7d8ee288a2e1de 304 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 26 302 2.3E-19 T 11-11-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 SHALO_RS14085 e192e438307e53ceca7d8ee288a2e1de 304 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 282 3.5E-54 T 11-11-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 SHALO_RS14085 e192e438307e53ceca7d8ee288a2e1de 304 Gene3D G3DSA:3.40.50.720 114 283 7.4E-60 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS14085 e192e438307e53ceca7d8ee288a2e1de 304 SUPERFAMILY SSF51735 104 283 5.01E-51 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS14085 e192e438307e53ceca7d8ee288a2e1de 304 Gene3D G3DSA:3.40.50.720 1 113 2.0E-27 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS14085 e192e438307e53ceca7d8ee288a2e1de 304 SUPERFAMILY SSF52283 1 135 2.76E-24 T 11-11-2016 SHALO_RS07245 f8f5926536df16731a8ac38a92b797d0 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 8.8E-32 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_RS07245 f8f5926536df16731a8ac38a92b797d0 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 8.8E-32 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_RS07245 f8f5926536df16731a8ac38a92b797d0 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 8.8E-32 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_RS07245 f8f5926536df16731a8ac38a92b797d0 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 8.8E-32 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_RS07245 f8f5926536df16731a8ac38a92b797d0 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 8.8E-32 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_RS07245 f8f5926536df16731a8ac38a92b797d0 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 8.8E-32 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_RS07245 f8f5926536df16731a8ac38a92b797d0 255 SUPERFAMILY SSF51735 2 253 1.1E-66 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS07245 f8f5926536df16731a8ac38a92b797d0 255 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 253 9.4E-60 T 11-11-2016 SHALO_RS07245 f8f5926536df16731a8ac38a92b797d0 255 Gene3D G3DSA:3.40.50.720 1 254 1.0E-66 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS10470 bc01a31fda7a2c34d35c2e05f76dc920 711 SUPERFAMILY SSF56801 202 708 1.83E-89 T 11-11-2016 SHALO_RS10470 bc01a31fda7a2c34d35c2e05f76dc920 711 Gene3D G3DSA:3.40.50.980 209 377 5.6E-19 T 11-11-2016 SHALO_RS10470 bc01a31fda7a2c34d35c2e05f76dc920 711 ProSitePatterns PS00455 Putative AMP-binding domain signature. 371 382 - T 11-11-2016 IPR020845 AMP-binding, conserved site SHALO_RS10470 bc01a31fda7a2c34d35c2e05f76dc920 711 Gene3D G3DSA:2.30.38.10 535 608 3.6E-11 T 11-11-2016 SHALO_RS10470 bc01a31fda7a2c34d35c2e05f76dc920 711 Pfam PF01553 Acyltransferase 15 137 3.7E-20 T 11-11-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 SHALO_RS10470 bc01a31fda7a2c34d35c2e05f76dc920 711 Gene3D G3DSA:3.40.1130.10 23 139 2.5E-9 T 11-11-2016 SHALO_RS10470 bc01a31fda7a2c34d35c2e05f76dc920 711 SMART SM00563 30 140 9.4E-30 T 11-11-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 SHALO_RS10470 bc01a31fda7a2c34d35c2e05f76dc920 711 Gene3D G3DSA:3.40.50.980 378 534 2.4E-37 T 11-11-2016 SHALO_RS10470 bc01a31fda7a2c34d35c2e05f76dc920 711 Pfam PF00501 AMP-binding enzyme 214 615 2.2E-64 T 11-11-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 SHALO_RS10470 bc01a31fda7a2c34d35c2e05f76dc920 711 Gene3D G3DSA:3.30.300.30 613 709 1.3E-7 T 11-11-2016 SHALO_RS10470 bc01a31fda7a2c34d35c2e05f76dc920 711 SUPERFAMILY SSF69593 8 180 2.22E-27 T 11-11-2016 SHALO_RS01570 505d887501b0362a19c0923fec0ec88e 933 Pfam PF08495 FIST N domain 29 215 5.0E-28 T 11-11-2016 IPR013702 FIST domain, N-terminal SHALO_RS01570 505d887501b0362a19c0923fec0ec88e 933 Pfam PF00563 EAL domain 700 927 4.8E-55 T 11-11-2016 IPR001633 EAL domain SHALO_RS01570 505d887501b0362a19c0923fec0ec88e 933 Pfam PF00990 Diguanylate cyclase, GGDEF domain 532 675 6.3E-20 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS01570 505d887501b0362a19c0923fec0ec88e 933 SMART SM00052 693 932 1.2E-54 T 11-11-2016 IPR001633 EAL domain SHALO_RS01570 505d887501b0362a19c0923fec0ec88e 933 SMART SM00267 519 681 1.5E-10 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS01570 505d887501b0362a19c0923fec0ec88e 933 Pfam PF13426 PAS domain 416 518 5.0E-10 T 11-11-2016 IPR000014 PAS domain SHALO_RS01570 505d887501b0362a19c0923fec0ec88e 933 SUPERFAMILY SSF141868 699 929 1.7E-62 T 11-11-2016 IPR001633 EAL domain SHALO_RS01570 505d887501b0362a19c0923fec0ec88e 933 SMART SM01204 217 346 4.6E-33 T 11-11-2016 IPR019494 FIST, C-domain SHALO_RS01570 505d887501b0362a19c0923fec0ec88e 933 Gene3D G3DSA:3.30.70.270 531 682 4.0E-25 T 11-11-2016 SHALO_RS01570 505d887501b0362a19c0923fec0ec88e 933 SUPERFAMILY SSF55785 418 516 4.19E-20 T 11-11-2016 IPR000014 PAS domain SHALO_RS01570 505d887501b0362a19c0923fec0ec88e 933 SMART SM00897 27 216 3.0E-29 T 11-11-2016 IPR013702 FIST domain, N-terminal SHALO_RS01570 505d887501b0362a19c0923fec0ec88e 933 Gene3D G3DSA:3.20.20.450 696 930 1.7E-62 T 11-11-2016 IPR001633 EAL domain SHALO_RS01570 505d887501b0362a19c0923fec0ec88e 933 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 421 524 1.1E-12 T 11-11-2016 IPR000014 PAS domain SHALO_RS01570 505d887501b0362a19c0923fec0ec88e 933 Pfam PF10442 FIST C domain 219 345 2.0E-20 T 11-11-2016 IPR019494 FIST, C-domain SHALO_RS01570 505d887501b0362a19c0923fec0ec88e 933 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 528 664 1.6E-16 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS01570 505d887501b0362a19c0923fec0ec88e 933 Gene3D G3DSA:3.30.450.20 421 518 1.6E-18 T 11-11-2016 SHALO_RS01570 505d887501b0362a19c0923fec0ec88e 933 SUPERFAMILY SSF55073 534 679 1.18E-22 T 11-11-2016 IPR029787 Nucleotide cyclase SHALO_RS10800 ca82fbbe4d7f08b5d36106cd86c4b2da 295 Gene3D G3DSA:3.40.50.2300 1 120 4.8E-15 T 11-11-2016 SHALO_RS10800 ca82fbbe4d7f08b5d36106cd86c4b2da 295 PIRSF PIRSF016788 1 295 4.0E-97 T 11-11-2016 IPR014483 Fis-like DNA-binding domain-containing signal transduction response regulator, predicted SHALO_RS10800 ca82fbbe4d7f08b5d36106cd86c4b2da 295 Gene3D G3DSA:1.10.10.60 270 293 5.0E-5 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 SHALO_RS10800 ca82fbbe4d7f08b5d36106cd86c4b2da 295 SMART SM00448 1 105 1.4E-7 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS10800 ca82fbbe4d7f08b5d36106cd86c4b2da 295 SUPERFAMILY SSF52172 1 128 1.31E-18 T 11-11-2016 IPR011006 CheY-like superfamily SHALO_RS10800 ca82fbbe4d7f08b5d36106cd86c4b2da 295 Pfam PF00072 Response regulator receiver domain 3 105 1.4E-7 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS09100 a55f25e9f6f87b9ea3f8cf8ccaaeaeaf 377 Gene3D G3DSA:3.90.1150.10 247 375 4.9E-30 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SHALO_RS09100 a55f25e9f6f87b9ea3f8cf8ccaaeaeaf 377 SUPERFAMILY SSF53383 1 376 1.29E-87 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase SHALO_RS09100 a55f25e9f6f87b9ea3f8cf8ccaaeaeaf 377 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 4 374 4.9E-131 T 11-11-2016 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936 SHALO_RS09100 a55f25e9f6f87b9ea3f8cf8ccaaeaeaf 377 Pfam PF00155 Aminotransferase class I and II 37 369 4.8E-35 T 11-11-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SHALO_RS09100 a55f25e9f6f87b9ea3f8cf8ccaaeaeaf 377 Gene3D G3DSA:3.40.640.10 39 246 6.1E-50 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SHALO_RS03285 d23396b661a6e3f99f617ed251702c52 482 SMART SM00116 156 204 3.1E-10 T 11-11-2016 IPR000644 CBS domain SHALO_RS03285 d23396b661a6e3f99f617ed251702c52 482 SMART SM00116 95 143 7.4E-10 T 11-11-2016 IPR000644 CBS domain SHALO_RS03285 d23396b661a6e3f99f617ed251702c52 482 PIRSF PIRSF000130 1 482 1.4E-206 T 11-11-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-73817 SHALO_RS03285 d23396b661a6e3f99f617ed251702c52 482 Pfam PF00571 CBS domain 95 139 6.2E-11 T 11-11-2016 IPR000644 CBS domain SHALO_RS03285 d23396b661a6e3f99f617ed251702c52 482 Pfam PF00571 CBS domain 148 201 1.3E-10 T 11-11-2016 IPR000644 CBS domain SHALO_RS03285 d23396b661a6e3f99f617ed251702c52 482 SUPERFAMILY SSF54631 73 201 3.66E-32 T 11-11-2016 SHALO_RS03285 d23396b661a6e3f99f617ed251702c52 482 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 7 448 2.2E-188 T 11-11-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-73817 SHALO_RS03285 d23396b661a6e3f99f617ed251702c52 482 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 7 468 5.6E-161 T 11-11-2016 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 SHALO_RS03285 d23396b661a6e3f99f617ed251702c52 482 SMART SM01240 6 468 0.0 T 11-11-2016 SHALO_RS03285 d23396b661a6e3f99f617ed251702c52 482 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 7 481 83.362 T 11-11-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-73817 SHALO_RS03285 d23396b661a6e3f99f617ed251702c52 482 SUPERFAMILY SSF51412 2 89 1.23E-122 T 11-11-2016 SHALO_RS03285 d23396b661a6e3f99f617ed251702c52 482 SUPERFAMILY SSF51412 215 472 1.23E-122 T 11-11-2016 SHALO_RS03285 d23396b661a6e3f99f617ed251702c52 482 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 290 302 - T 11-11-2016 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 SHALO_RS03285 d23396b661a6e3f99f617ed251702c52 482 Gene3D G3DSA:3.20.20.70 3 480 1.3E-197 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_RS10865 3072cc5d267ba7df21a3609ec40f777e 259 SUPERFAMILY SSF46785 18 102 3.48E-23 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS10865 3072cc5d267ba7df21a3609ec40f777e 259 Pfam PF03459 TOBE domain 194 255 2.9E-11 T 11-11-2016 IPR005116 Transport-associated OB, type 1 SHALO_RS10865 3072cc5d267ba7df21a3609ec40f777e 259 Pfam PF03459 TOBE domain 124 185 6.4E-11 T 11-11-2016 IPR005116 Transport-associated OB, type 1 SHALO_RS10865 3072cc5d267ba7df21a3609ec40f777e 259 SUPERFAMILY SSF50331 193 258 9.96E-17 T 11-11-2016 IPR008995 Molybdate/tungstate binding, C-terminal SHALO_RS10865 3072cc5d267ba7df21a3609ec40f777e 259 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 19 81 4.0E-14 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SHALO_RS10865 3072cc5d267ba7df21a3609ec40f777e 259 Gene3D G3DSA:1.10.10.10 12 123 5.4E-38 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS10865 3072cc5d267ba7df21a3609ec40f777e 259 PIRSF PIRSF005763 8 259 5.8E-77 T 11-11-2016 IPR016462 Molybdate-dependent transcriptional regulator ModE GO:0006355|GO:0015689|GO:0030151 SHALO_RS10865 3072cc5d267ba7df21a3609ec40f777e 259 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 121 187 9.3E-19 T 11-11-2016 IPR004606 Molybdenum-pterin binding GO:0006810|GO:0030151 SHALO_RS10865 3072cc5d267ba7df21a3609ec40f777e 259 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 194 258 1.1E-16 T 11-11-2016 IPR004606 Molybdenum-pterin binding GO:0006810|GO:0030151 SHALO_RS10865 3072cc5d267ba7df21a3609ec40f777e 259 Gene3D G3DSA:2.40.50.100 124 187 7.2E-23 T 11-11-2016 SHALO_RS10865 3072cc5d267ba7df21a3609ec40f777e 259 Gene3D G3DSA:2.40.50.100 192 258 1.0E-21 T 11-11-2016 SHALO_RS10865 3072cc5d267ba7df21a3609ec40f777e 259 SUPERFAMILY SSF50331 121 187 1.04E-17 T 11-11-2016 IPR008995 Molybdate/tungstate binding, C-terminal SHALO_RS15130 c24065d9d69ec8c63868ccb4d40d5631 185 SUPERFAMILY SSF140478 22 170 3.14E-47 T 11-11-2016 IPR023353 LemA-like domain SHALO_RS15130 c24065d9d69ec8c63868ccb4d40d5631 185 Gene3D G3DSA:1.20.1440.20 10 180 1.9E-56 T 11-11-2016 IPR023353 LemA-like domain SHALO_RS15130 c24065d9d69ec8c63868ccb4d40d5631 185 Pfam PF04011 LemA family 7 180 3.8E-60 T 11-11-2016 IPR007156 LemA SHALO_RS04415 e144c0cc641badd34be88a13db564739 645 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 6 507 6.0E-160 T 11-11-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 SHALO_RS04415 e144c0cc641badd34be88a13db564739 645 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 14 136 2.5E-6 T 11-11-2016 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 SHALO_RS04415 e144c0cc641badd34be88a13db564739 645 Hamap MF_01228 Methionine--tRNA ligase [metG]. 1 506 46.468 T 11-11-2016 IPR023457 Methionine-tRNA synthetase, type 2 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 SHALO_RS04415 e144c0cc641badd34be88a13db564739 645 Gene3D G3DSA:2.40.50.140 538 644 4.4E-35 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold SHALO_RS04415 e144c0cc641badd34be88a13db564739 645 Pfam PF01588 Putative tRNA binding domain 550 641 9.1E-26 T 11-11-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 SHALO_RS04415 e144c0cc641badd34be88a13db564739 645 Pfam PF09334 tRNA synthetases class I (M) 143 361 2.4E-66 T 11-11-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 SHALO_RS04415 e144c0cc641badd34be88a13db564739 645 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 525 644 7.1E-36 T 11-11-2016 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 SHALO_RS04415 e144c0cc641badd34be88a13db564739 645 SUPERFAMILY SSF50249 544 644 7.59E-30 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold SHALO_RS04415 e144c0cc641badd34be88a13db564739 645 Gene3D G3DSA:1.10.730.10 339 507 5.0E-35 T 11-11-2016 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 SHALO_RS04415 e144c0cc641badd34be88a13db564739 645 SUPERFAMILY SSF52374 3 348 9.38E-110 T 11-11-2016 SHALO_RS04415 e144c0cc641badd34be88a13db564739 645 PRINTS PR01041 Methionyl-tRNA synthetase signature 7 20 7.1E-36 T 11-11-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 SHALO_RS04415 e144c0cc641badd34be88a13db564739 645 PRINTS PR01041 Methionyl-tRNA synthetase signature 349 360 7.1E-36 T 11-11-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 SHALO_RS04415 e144c0cc641badd34be88a13db564739 645 PRINTS PR01041 Methionyl-tRNA synthetase signature 39 53 7.1E-36 T 11-11-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 SHALO_RS04415 e144c0cc641badd34be88a13db564739 645 PRINTS PR01041 Methionyl-tRNA synthetase signature 226 237 7.1E-36 T 11-11-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 SHALO_RS04415 e144c0cc641badd34be88a13db564739 645 PRINTS PR01041 Methionyl-tRNA synthetase signature 257 272 7.1E-36 T 11-11-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 SHALO_RS04415 e144c0cc641badd34be88a13db564739 645 PRINTS PR01041 Methionyl-tRNA synthetase signature 87 98 7.1E-36 T 11-11-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 SHALO_RS04415 e144c0cc641badd34be88a13db564739 645 Gene3D G3DSA:3.40.50.620 3 113 6.3E-76 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHALO_RS04415 e144c0cc641badd34be88a13db564739 645 Gene3D G3DSA:3.40.50.620 228 337 6.3E-76 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHALO_RS04415 e144c0cc641badd34be88a13db564739 645 Gene3D G3DSA:2.170.220.10 116 227 3.0E-43 T 11-11-2016 SHALO_RS04415 e144c0cc641badd34be88a13db564739 645 SUPERFAMILY SSF47323 354 516 3.18E-30 T 11-11-2016 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 SHALO_RS00855 eb857d014b544a2febc6ed8bfde4b5c4 266 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 38 257 1.8E-61 T 11-11-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SHALO_RS00855 eb857d014b544a2febc6ed8bfde4b5c4 266 Gene3D G3DSA:3.40.190.10 115 219 7.1E-14 T 11-11-2016 SHALO_RS00855 eb857d014b544a2febc6ed8bfde4b5c4 266 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 60 73 - T 11-11-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 SHALO_RS00855 eb857d014b544a2febc6ed8bfde4b5c4 266 Gene3D G3DSA:3.40.190.10 220 258 4.7E-47 T 11-11-2016 SHALO_RS00855 eb857d014b544a2febc6ed8bfde4b5c4 266 Gene3D G3DSA:3.40.190.10 34 114 4.7E-47 T 11-11-2016 SHALO_RS00855 eb857d014b544a2febc6ed8bfde4b5c4 266 SMART SM00079 37 258 1.1E-5 T 11-11-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 SHALO_RS00855 eb857d014b544a2febc6ed8bfde4b5c4 266 SUPERFAMILY SSF53850 2 257 1.2E-69 T 11-11-2016 SHALO_RS00855 eb857d014b544a2febc6ed8bfde4b5c4 266 SMART SM00062 37 258 1.6E-63 T 11-11-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SHALO_RS14655 906a889eb9c6d841f333229ad3f2b3a9 314 Gene3D G3DSA:2.20.25.10 9 56 3.2E-4 T 11-11-2016 SHALO_RS14655 906a889eb9c6d841f333229ad3f2b3a9 314 SUPERFAMILY SSF53335 77 300 2.79E-29 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS14655 906a889eb9c6d841f333229ad3f2b3a9 314 Gene3D G3DSA:3.40.50.150 252 299 2.1E-30 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS14655 906a889eb9c6d841f333229ad3f2b3a9 314 Gene3D G3DSA:3.40.50.150 97 202 2.1E-30 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS14655 906a889eb9c6d841f333229ad3f2b3a9 314 SUPERFAMILY SSF158997 3 66 4.97E-9 T 11-11-2016 SHALO_RS14655 906a889eb9c6d841f333229ad3f2b3a9 314 Pfam PF08241 Methyltransferase domain 102 196 8.8E-17 T 11-11-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 SHALO_RS04545 0a4734e12ca2641f1665cfcc29f3da66 212 Gene3D G3DSA:1.10.10.10 161 211 1.1E-12 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS04545 0a4734e12ca2641f1665cfcc29f3da66 212 SMART SM00100 9 127 2.6E-16 T 11-11-2016 IPR000595 Cyclic nucleotide-binding domain SHALO_RS04545 0a4734e12ca2641f1665cfcc29f3da66 212 SUPERFAMILY SSF51206 3 137 3.14E-30 T 11-11-2016 IPR018490 Cyclic nucleotide-binding-like SHALO_RS04545 0a4734e12ca2641f1665cfcc29f3da66 212 Gene3D G3DSA:2.60.120.10 5 135 1.8E-30 T 11-11-2016 IPR014710 RmlC-like jelly roll fold SHALO_RS04545 0a4734e12ca2641f1665cfcc29f3da66 212 Pfam PF00027 Cyclic nucleotide-binding domain 28 109 6.1E-17 T 11-11-2016 IPR000595 Cyclic nucleotide-binding domain SHALO_RS04545 0a4734e12ca2641f1665cfcc29f3da66 212 SMART SM00419 154 204 3.8E-8 T 11-11-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 SHALO_RS04545 0a4734e12ca2641f1665cfcc29f3da66 212 Pfam PF13545 Crp-like helix-turn-helix domain 148 210 1.9E-12 T 11-11-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 SHALO_RS04545 0a4734e12ca2641f1665cfcc29f3da66 212 SUPERFAMILY SSF46785 145 211 1.97E-9 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS13015 4f9fa8fc24552a8ab0ab0395944c8fff 598 Gene3D G3DSA:1.25.40.10 8 218 2.2E-46 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SHALO_RS13015 4f9fa8fc24552a8ab0ab0395944c8fff 598 Gene3D G3DSA:3.40.50.2000 504 566 1.2E-9 T 11-11-2016 SHALO_RS13015 4f9fa8fc24552a8ab0ab0395944c8fff 598 SUPERFAMILY SSF53756 337 568 6.28E-15 T 11-11-2016 SHALO_RS13015 4f9fa8fc24552a8ab0ab0395944c8fff 598 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 504 565 8.2E-5 T 11-11-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 SHALO_RS13015 4f9fa8fc24552a8ab0ab0395944c8fff 598 Pfam PF00515 Tetratricopeptide repeat 183 215 1.5E-11 T 11-11-2016 IPR001440 Tetratricopeptide repeat 1 GO:0005515 SHALO_RS13015 4f9fa8fc24552a8ab0ab0395944c8fff 598 Pfam PF00515 Tetratricopeptide repeat 217 249 5.2E-7 T 11-11-2016 IPR001440 Tetratricopeptide repeat 1 GO:0005515 SHALO_RS13015 4f9fa8fc24552a8ab0ab0395944c8fff 598 Pfam PF00515 Tetratricopeptide repeat 250 283 1.1E-10 T 11-11-2016 IPR001440 Tetratricopeptide repeat 1 GO:0005515 SHALO_RS13015 4f9fa8fc24552a8ab0ab0395944c8fff 598 SMART SM00028 81 114 260.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SHALO_RS13015 4f9fa8fc24552a8ab0ab0395944c8fff 598 SMART SM00028 148 181 7.2E-4 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SHALO_RS13015 4f9fa8fc24552a8ab0ab0395944c8fff 598 SMART SM00028 216 249 1.5E-5 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SHALO_RS13015 4f9fa8fc24552a8ab0ab0395944c8fff 598 SMART SM00028 250 283 2.2E-9 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SHALO_RS13015 4f9fa8fc24552a8ab0ab0395944c8fff 598 SMART SM00028 10 43 350.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SHALO_RS13015 4f9fa8fc24552a8ab0ab0395944c8fff 598 SMART SM00028 182 215 3.3E-9 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SHALO_RS13015 4f9fa8fc24552a8ab0ab0395944c8fff 598 SMART SM00028 47 80 2.9E-4 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SHALO_RS13015 4f9fa8fc24552a8ab0ab0395944c8fff 598 SUPERFAMILY SSF48452 14 314 1.9E-48 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SHALO_RS13015 4f9fa8fc24552a8ab0ab0395944c8fff 598 Pfam PF13432 Tetratricopeptide repeat 128 180 7.9E-4 T 11-11-2016 SHALO_RS13015 4f9fa8fc24552a8ab0ab0395944c8fff 598 Gene3D G3DSA:1.25.40.10 219 308 1.1E-24 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SHALO_RS13015 4f9fa8fc24552a8ab0ab0395944c8fff 598 Pfam PF13181 Tetratricopeptide repeat 48 78 4.4E-4 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SHALO_RS03705 7a3aec4b1526dbe60621fa1b5d4c6c28 414 SUPERFAMILY SSF47384 191 262 5.69E-6 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS03705 7a3aec4b1526dbe60621fa1b5d4c6c28 414 SUPERFAMILY SSF55874 266 406 2.88E-18 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS03705 7a3aec4b1526dbe60621fa1b5d4c6c28 414 Gene3D G3DSA:1.10.287.130 198 239 1.3E-6 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS03705 7a3aec4b1526dbe60621fa1b5d4c6c28 414 SMART SM00304 154 206 7.2E-6 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SHALO_RS03705 7a3aec4b1526dbe60621fa1b5d4c6c28 414 Pfam PF00672 HAMP domain 135 202 9.5E-11 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SHALO_RS03705 7a3aec4b1526dbe60621fa1b5d4c6c28 414 SUPERFAMILY SSF158472 157 205 5.89E-7 T 11-11-2016 SHALO_RS03705 7a3aec4b1526dbe60621fa1b5d4c6c28 414 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 318 395 1.5E-8 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS03705 7a3aec4b1526dbe60621fa1b5d4c6c28 414 Gene3D G3DSA:3.30.565.10 267 407 1.1E-15 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS03705 7a3aec4b1526dbe60621fa1b5d4c6c28 414 SMART SM00387 310 412 1.9E-9 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS07555 58cc96f9367c790b5e7a742405106492 493 Gene3D G3DSA:3.30.70.20 355 422 2.0E-8 T 11-11-2016 SHALO_RS07555 58cc96f9367c790b5e7a742405106492 493 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 358 369 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_RS07555 58cc96f9367c790b5e7a742405106492 493 TIGRFAM TIGR02486 RDH: reductive dehalogenase 168 456 3.7E-86 T 11-11-2016 IPR012832 Reductive dehalogenase SHALO_RS07555 58cc96f9367c790b5e7a742405106492 493 SUPERFAMILY SSF54862 347 422 8.38E-11 T 11-11-2016 SHALO_RS07555 58cc96f9367c790b5e7a742405106492 493 Pfam PF13486 Reductive dehalogenase subunit 177 344 1.7E-31 T 11-11-2016 IPR028894 Reductive dehalogenase domain SHALO_RS07555 58cc96f9367c790b5e7a742405106492 493 Pfam PF13484 4Fe-4S double cluster binding domain 357 421 1.1E-11 T 11-11-2016 SHALO_RS12720 d04a8de30b7a0bf07ec9a6d4b366ddf3 692 Pfam PF00593 TonB dependent receptor 441 691 2.0E-28 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SHALO_RS12720 d04a8de30b7a0bf07ec9a6d4b366ddf3 692 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 675 692 - T 11-11-2016 IPR010917 TonB-dependent receptor, conserved site SHALO_RS12720 d04a8de30b7a0bf07ec9a6d4b366ddf3 692 Gene3D G3DSA:2.40.170.20 147 692 6.3E-91 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SHALO_RS12720 d04a8de30b7a0bf07ec9a6d4b366ddf3 692 Pfam PF07715 TonB-dependent Receptor Plug Domain 33 136 5.2E-17 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SHALO_RS12720 d04a8de30b7a0bf07ec9a6d4b366ddf3 692 Gene3D G3DSA:2.170.130.10 14 146 8.6E-33 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SHALO_RS12720 d04a8de30b7a0bf07ec9a6d4b366ddf3 692 SUPERFAMILY SSF56935 14 692 2.24E-120 T 11-11-2016 SHALO_RS07620 97e1403c8f228ea192a95968f4beaa93 240 TIGRFAM TIGR00317 cobS: cobalamin 5'-phosphate synthase 7 234 1.0E-43 T 11-11-2016 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 SHALO_RS07620 97e1403c8f228ea192a95968f4beaa93 240 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 240 38.228 T 11-11-2016 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 SHALO_RS07620 97e1403c8f228ea192a95968f4beaa93 240 Pfam PF02654 Cobalamin-5-phosphate synthase 8 234 1.6E-53 T 11-11-2016 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 SHALO_RS04730 faa69353c0501ec041ef3a9c7b12c30f 443 SUPERFAMILY SSF49503 91 252 1.49E-39 T 11-11-2016 IPR008972 Cupredoxin SHALO_RS04730 faa69353c0501ec041ef3a9c7b12c30f 443 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 141 189 - T 11-11-2016 IPR001505 Copper centre Cu(A) GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_RS04730 faa69353c0501ec041ef3a9c7b12c30f 443 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 122 194 7.4E-14 T 11-11-2016 IPR002429 Cytochrome c oxidase subunit II C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_RS04730 faa69353c0501ec041ef3a9c7b12c30f 443 Gene3D G3DSA:1.10.760.10 221 315 6.6E-16 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS04730 faa69353c0501ec041ef3a9c7b12c30f 443 Gene3D G3DSA:1.10.760.10 348 441 1.9E-20 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS04730 faa69353c0501ec041ef3a9c7b12c30f 443 Pfam PF00034 Cytochrome c 349 441 7.8E-9 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS04730 faa69353c0501ec041ef3a9c7b12c30f 443 Pfam PF00034 Cytochrome c 221 315 2.1E-6 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS04730 faa69353c0501ec041ef3a9c7b12c30f 443 Gene3D G3DSA:1.10.287.90 7 86 5.5E-14 T 11-11-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_RS04730 faa69353c0501ec041ef3a9c7b12c30f 443 SUPERFAMILY SSF46626 338 442 1.09E-16 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS04730 faa69353c0501ec041ef3a9c7b12c30f 443 SUPERFAMILY SSF46626 217 321 2.66E-12 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS04730 faa69353c0501ec041ef3a9c7b12c30f 443 Gene3D G3DSA:2.60.40.420 96 206 3.3E-31 T 11-11-2016 IPR008972 Cupredoxin SHALO_RS04730 faa69353c0501ec041ef3a9c7b12c30f 443 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 5 82 1.7E-7 T 11-11-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_RS04730 faa69353c0501ec041ef3a9c7b12c30f 443 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 10 205 1.6E-52 T 11-11-2016 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_RS04730 faa69353c0501ec041ef3a9c7b12c30f 443 SUPERFAMILY SSF81464 5 86 2.78E-14 T 11-11-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_RS07885 c8eedf53c5d21503faa03a9e2dbbc47b 367 Gene3D G3DSA:3.40.50.150 159 366 7.0E-46 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS07885 c8eedf53c5d21503faa03a9e2dbbc47b 367 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 18 366 1.0E-133 T 11-11-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 SHALO_RS07885 c8eedf53c5d21503faa03a9e2dbbc47b 367 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 300 329 - T 11-11-2016 IPR030390 RNA methyltransferase TrmA, active site SHALO_RS07885 c8eedf53c5d21503faa03a9e2dbbc47b 367 SUPERFAMILY SSF53335 3 366 8.94E-64 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS07885 c8eedf53c5d21503faa03a9e2dbbc47b 367 TIGRFAM TIGR02143 trmA_only: tRNA (uracil(54)-C(5))-methyltransferase 18 366 1.1E-134 T 11-11-2016 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 SHALO_RS07885 c8eedf53c5d21503faa03a9e2dbbc47b 367 Hamap MF_01011 tRNA/tmRNA (uracil-C(5))-methyltransferase [trmA]. 12 367 38.11 T 11-11-2016 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 SHALO_RS03445 69d2b256a506730f2b36b04cea6e3ccb 131 Gene3D G3DSA:2.60.15.10 1 85 1.5E-28 T 11-11-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 SHALO_RS03445 69d2b256a506730f2b36b04cea6e3ccb 131 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 4 83 1.9E-27 T 11-11-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 SHALO_RS03445 69d2b256a506730f2b36b04cea6e3ccb 131 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 3 124 2.6E-37 T 11-11-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 SHALO_RS03445 69d2b256a506730f2b36b04cea6e3ccb 131 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 2 124 18.479 T 11-11-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 SHALO_RS03445 69d2b256a506730f2b36b04cea6e3ccb 131 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 9 84 3.0E-22 T 11-11-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 SHALO_RS03445 69d2b256a506730f2b36b04cea6e3ccb 131 SUPERFAMILY SSF51344 2 84 1.12E-24 T 11-11-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 SHALO_RS11515 294f5da645ec91e7c296646dc0116be7 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 161 227 4.4E-14 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS11515 294f5da645ec91e7c296646dc0116be7 230 Gene3D G3DSA:1.10.10.10 143 228 7.0E-16 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS11515 294f5da645ec91e7c296646dc0116be7 230 Pfam PF00072 Response regulator receiver domain 13 122 1.8E-26 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS11515 294f5da645ec91e7c296646dc0116be7 230 SUPERFAMILY SSF46894 142 228 2.75E-15 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SHALO_RS11515 294f5da645ec91e7c296646dc0116be7 230 SUPERFAMILY SSF52172 10 171 2.13E-35 T 11-11-2016 IPR011006 CheY-like superfamily SHALO_RS11515 294f5da645ec91e7c296646dc0116be7 230 SMART SM00448 11 122 3.2E-32 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS11515 294f5da645ec91e7c296646dc0116be7 230 Gene3D G3DSA:3.40.50.2300 10 127 5.9E-35 T 11-11-2016 SHALO_RS11515 294f5da645ec91e7c296646dc0116be7 230 SMART SM00862 157 227 1.2E-14 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS09850 5ef4b7a941e573b6cee394c3f47c3fba 302 Pfam PF16916 Dimerisation domain of Zinc Transporter 206 285 2.0E-19 T 11-11-2016 IPR027470 Cation efflux protein, cytoplasmic domain SHALO_RS09850 5ef4b7a941e573b6cee394c3f47c3fba 302 Pfam PF01545 Cation efflux family 9 202 8.1E-38 T 11-11-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 SHALO_RS09850 5ef4b7a941e573b6cee394c3f47c3fba 302 SUPERFAMILY SSF160240 205 287 3.14E-17 T 11-11-2016 SHALO_RS09850 5ef4b7a941e573b6cee394c3f47c3fba 302 SUPERFAMILY SSF161111 4 203 5.89E-49 T 11-11-2016 SHALO_RS09850 5ef4b7a941e573b6cee394c3f47c3fba 302 Gene3D G3DSA:1.20.1510.10 5 202 1.7E-42 T 11-11-2016 IPR027469 Cation efflux protein transmembrane domain SHALO_RS09850 5ef4b7a941e573b6cee394c3f47c3fba 302 Gene3D G3DSA:3.30.70.1350 203 287 2.7E-19 T 11-11-2016 IPR027470 Cation efflux protein, cytoplasmic domain SHALO_RS09850 5ef4b7a941e573b6cee394c3f47c3fba 302 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 5 275 1.2E-66 T 11-11-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 SHALO_RS02645 0a2ab9575d86976d4a1b2edf0c6d8d54 189 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 3 183 21.898 T 11-11-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 SHALO_RS02645 0a2ab9575d86976d4a1b2edf0c6d8d54 189 SUPERFAMILY SSF53335 10 169 2.67E-22 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS02645 0a2ab9575d86976d4a1b2edf0c6d8d54 189 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 16 171 4.8E-39 T 11-11-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 SHALO_RS02645 0a2ab9575d86976d4a1b2edf0c6d8d54 189 Pfam PF02527 rRNA small subunit methyltransferase G 14 170 1.4E-38 T 11-11-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 SHALO_RS02645 0a2ab9575d86976d4a1b2edf0c6d8d54 189 Gene3D G3DSA:3.40.50.150 6 169 2.9E-37 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS02645 0a2ab9575d86976d4a1b2edf0c6d8d54 189 PIRSF PIRSF003078 3 186 6.5E-41 T 11-11-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 SHALO_RS10675 c6e7758255be57d02fb7b2c4d9ef8802 763 SUPERFAMILY SSF55073 343 494 1.26E-39 T 11-11-2016 IPR029787 Nucleotide cyclase SHALO_RS10675 c6e7758255be57d02fb7b2c4d9ef8802 763 SUPERFAMILY SSF141868 509 757 4.58E-85 T 11-11-2016 IPR001633 EAL domain SHALO_RS10675 c6e7758255be57d02fb7b2c4d9ef8802 763 Gene3D G3DSA:3.20.20.450 507 757 5.2E-92 T 11-11-2016 IPR001633 EAL domain SHALO_RS10675 c6e7758255be57d02fb7b2c4d9ef8802 763 Pfam PF00990 Diguanylate cyclase, GGDEF domain 338 488 3.0E-38 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS10675 c6e7758255be57d02fb7b2c4d9ef8802 763 SMART SM00052 504 749 4.8E-110 T 11-11-2016 IPR001633 EAL domain SHALO_RS10675 c6e7758255be57d02fb7b2c4d9ef8802 763 Pfam PF00563 EAL domain 510 744 2.6E-71 T 11-11-2016 IPR001633 EAL domain SHALO_RS10675 c6e7758255be57d02fb7b2c4d9ef8802 763 Gene3D G3DSA:3.30.450.20 93 176 7.3E-4 T 11-11-2016 SHALO_RS10675 c6e7758255be57d02fb7b2c4d9ef8802 763 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 337 491 2.1E-34 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS10675 c6e7758255be57d02fb7b2c4d9ef8802 763 SMART SM00267 327 494 1.9E-50 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS10675 c6e7758255be57d02fb7b2c4d9ef8802 763 Gene3D G3DSA:3.30.70.270 340 500 1.7E-43 T 11-11-2016 SHALO_RS09480 4f69f45ab9483ccecff09723588a891f 112 Gene3D G3DSA:3.30.70.120 1 112 1.3E-48 T 11-11-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal SHALO_RS09480 4f69f45ab9483ccecff09723588a891f 112 SMART SM00938 4 105 3.3E-66 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SHALO_RS09480 4f69f45ab9483ccecff09723588a891f 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 11-11-2016 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 SHALO_RS09480 4f69f45ab9483ccecff09723588a891f 112 SUPERFAMILY SSF54913 1 112 3.18E-45 T 11-11-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta SHALO_RS09480 4f69f45ab9483ccecff09723588a891f 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 11-11-2016 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 SHALO_RS09480 4f69f45ab9483ccecff09723588a891f 112 PRINTS PR00340 P-II protein signature 52 75 3.8E-42 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SHALO_RS09480 4f69f45ab9483ccecff09723588a891f 112 PRINTS PR00340 P-II protein signature 2 17 3.8E-42 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SHALO_RS09480 4f69f45ab9483ccecff09723588a891f 112 PRINTS PR00340 P-II protein signature 23 41 3.8E-42 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SHALO_RS09480 4f69f45ab9483ccecff09723588a891f 112 PRINTS PR00340 P-II protein signature 83 103 3.8E-42 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SHALO_RS09480 4f69f45ab9483ccecff09723588a891f 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 1.0E-42 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SHALO_RS09480 4f69f45ab9483ccecff09723588a891f 112 PIRSF PIRSF039144 1 112 5.9E-55 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SHALO_RS07345 847349f9bc268bfd80067b15e71ff094 583 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 76 173 4.3E-23 T 11-11-2016 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 SHALO_RS07345 847349f9bc268bfd80067b15e71ff094 583 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 403 417 - T 11-11-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 SHALO_RS07345 847349f9bc268bfd80067b15e71ff094 583 SMART SM00382 336 457 7.4E-4 T 11-11-2016 IPR003593 AAA+ ATPase domain SHALO_RS07345 847349f9bc268bfd80067b15e71ff094 583 Pfam PF00437 Type II/IV secretion system protein 217 475 1.9E-80 T 11-11-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 SHALO_RS07345 847349f9bc268bfd80067b15e71ff094 583 SUPERFAMILY SSF52540 200 580 6.35E-98 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS07345 847349f9bc268bfd80067b15e71ff094 583 SUPERFAMILY SSF160246 6 76 6.02E-5 T 11-11-2016 SHALO_RS07345 847349f9bc268bfd80067b15e71ff094 583 SUPERFAMILY SSF160246 76 169 6.28E-16 T 11-11-2016 SHALO_RS07345 847349f9bc268bfd80067b15e71ff094 583 Gene3D G3DSA:3.30.450.90 186 308 6.8E-43 T 11-11-2016 SHALO_RS07345 847349f9bc268bfd80067b15e71ff094 583 Gene3D G3DSA:3.40.50.300 313 581 3.6E-96 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS02435 e2360b07734b1338173de5a6ca9b0e77 1385 Gene3D G3DSA:2.30.150.10 609 673 2.6E-19 T 11-11-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHALO_RS02435 e2360b07734b1338173de5a6ca9b0e77 1385 Pfam PF00562 RNA polymerase Rpb2, domain 6 735 1296 9.0E-145 T 11-11-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHALO_RS02435 e2360b07734b1338173de5a6ca9b0e77 1385 Pfam PF10385 RNA polymerase beta subunit external 1 domain 608 673 1.9E-17 T 11-11-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHALO_RS02435 e2360b07734b1338173de5a6ca9b0e77 1385 Pfam PF04565 RNA polymerase Rpb2, domain 3 530 598 2.4E-31 T 11-11-2016 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHALO_RS02435 e2360b07734b1338173de5a6ca9b0e77 1385 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1375 11.545 T 11-11-2016 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHALO_RS02435 e2360b07734b1338173de5a6ca9b0e77 1385 Gene3D G3DSA:2.40.50.100 732 805 8.3E-23 T 11-11-2016 SHALO_RS02435 e2360b07734b1338173de5a6ca9b0e77 1385 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 10 1372 0.0 T 11-11-2016 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHALO_RS02435 e2360b07734b1338173de5a6ca9b0e77 1385 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1094 1106 - T 11-11-2016 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHALO_RS02435 e2360b07734b1338173de5a6ca9b0e77 1385 Gene3D G3DSA:3.90.1100.10 20 155 9.9E-135 T 11-11-2016 SHALO_RS02435 e2360b07734b1338173de5a6ca9b0e77 1385 Gene3D G3DSA:3.90.1100.10 459 608 9.9E-135 T 11-11-2016 SHALO_RS02435 e2360b07734b1338173de5a6ca9b0e77 1385 Gene3D G3DSA:3.90.1100.10 676 730 9.9E-135 T 11-11-2016 SHALO_RS02435 e2360b07734b1338173de5a6ca9b0e77 1385 Pfam PF04560 RNA polymerase Rpb2, domain 7 1299 1374 5.8E-24 T 11-11-2016 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHALO_RS02435 e2360b07734b1338173de5a6ca9b0e77 1385 Gene3D G3DSA:2.40.50.150 841 950 3.8E-48 T 11-11-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHALO_RS02435 e2360b07734b1338173de5a6ca9b0e77 1385 Gene3D G3DSA:2.40.50.150 1076 1090 3.8E-48 T 11-11-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHALO_RS02435 e2360b07734b1338173de5a6ca9b0e77 1385 SUPERFAMILY SSF64484 1070 1375 0.0 T 11-11-2016 SHALO_RS02435 e2360b07734b1338173de5a6ca9b0e77 1385 SUPERFAMILY SSF64484 372 952 0.0 T 11-11-2016 SHALO_RS02435 e2360b07734b1338173de5a6ca9b0e77 1385 SUPERFAMILY SSF64484 12 229 0.0 T 11-11-2016 SHALO_RS02435 e2360b07734b1338173de5a6ca9b0e77 1385 Pfam PF04563 RNA polymerase beta subunit 27 517 1.6E-21 T 11-11-2016 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHALO_RS02435 e2360b07734b1338173de5a6ca9b0e77 1385 Pfam PF04561 RNA polymerase Rpb2, domain 2 155 228 2.7E-12 T 11-11-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHALO_RS02435 e2360b07734b1338173de5a6ca9b0e77 1385 Pfam PF04561 RNA polymerase Rpb2, domain 2 375 469 2.5E-17 T 11-11-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHALO_RS02435 e2360b07734b1338173de5a6ca9b0e77 1385 Gene3D G3DSA:2.40.270.10 806 833 5.8E-81 T 11-11-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHALO_RS02435 e2360b07734b1338173de5a6ca9b0e77 1385 Gene3D G3DSA:2.40.270.10 1091 1275 5.8E-81 T 11-11-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHALO_RS02435 e2360b07734b1338173de5a6ca9b0e77 1385 Gene3D G3DSA:3.90.1110.10 157 233 1.0E-57 T 11-11-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHALO_RS02435 e2360b07734b1338173de5a6ca9b0e77 1385 Gene3D G3DSA:3.90.1110.10 359 458 1.0E-57 T 11-11-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHALO_RS01400 024434b0bfe0f4a11a361fb33ff504cc 749 Gene3D G3DSA:2.40.160.50 461 749 5.0E-12 T 11-11-2016 SHALO_RS01400 024434b0bfe0f4a11a361fb33ff504cc 749 Pfam PF01103 Surface antigen 442 749 9.4E-62 T 11-11-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020 SHALO_RS01400 024434b0bfe0f4a11a361fb33ff504cc 749 Pfam PF07244 Surface antigen variable number repeat 277 337 3.4E-7 T 11-11-2016 IPR010827 Surface antigen variable number GO:0019867 SHALO_RS01400 024434b0bfe0f4a11a361fb33ff504cc 749 Pfam PF07244 Surface antigen variable number repeat 87 164 5.7E-10 T 11-11-2016 IPR010827 Surface antigen variable number GO:0019867 SHALO_RS01400 024434b0bfe0f4a11a361fb33ff504cc 749 Pfam PF07244 Surface antigen variable number repeat 343 414 7.2E-12 T 11-11-2016 IPR010827 Surface antigen variable number GO:0019867 SHALO_RS01400 024434b0bfe0f4a11a361fb33ff504cc 749 Pfam PF07244 Surface antigen variable number repeat 168 258 9.9E-5 T 11-11-2016 IPR010827 Surface antigen variable number GO:0019867 SHALO_RS01400 024434b0bfe0f4a11a361fb33ff504cc 749 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 20 749 1.8E-189 T 11-11-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 SHALO_RS01400 024434b0bfe0f4a11a361fb33ff504cc 749 PIRSF PIRSF006076 1 749 1.2E-194 T 11-11-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 SHALO_RS01400 024434b0bfe0f4a11a361fb33ff504cc 749 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 3 749 20.334 T 11-11-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 SHALO_RS06305 c6791bbef477e703f0506e41eaf94af6 122 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 3 94 2.5E-4 T 11-11-2016 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 SHALO_RS06305 c6791bbef477e703f0506e41eaf94af6 122 Gene3D G3DSA:2.30.110.10 1 121 8.8E-37 T 11-11-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 SHALO_RS06305 c6791bbef477e703f0506e41eaf94af6 122 SUPERFAMILY SSF50475 1 119 6.81E-22 T 11-11-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 SHALO_RS14530 5270ba7e25f62242c73d43dbaf761e0f 425 Pfam PF03949 Malic enzyme, NAD binding domain 165 355 2.1E-23 T 11-11-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 SHALO_RS14530 5270ba7e25f62242c73d43dbaf761e0f 425 Gene3D G3DSA:3.40.50.10380 10 160 3.6E-54 T 11-11-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 SHALO_RS14530 5270ba7e25f62242c73d43dbaf761e0f 425 SMART SM00919 163 397 6.0E-141 T 11-11-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 SHALO_RS14530 5270ba7e25f62242c73d43dbaf761e0f 425 SMART SM01274 18 151 1.5E-81 T 11-11-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 SHALO_RS14530 5270ba7e25f62242c73d43dbaf761e0f 425 PIRSF PIRSF000106 15 424 3.5E-73 T 11-11-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 SHALO_RS14530 5270ba7e25f62242c73d43dbaf761e0f 425 Pfam PF00390 Malic enzyme, N-terminal domain 20 114 2.6E-23 T 11-11-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 SHALO_RS14530 5270ba7e25f62242c73d43dbaf761e0f 425 SUPERFAMILY SSF53223 12 161 1.01E-53 T 11-11-2016 SHALO_RS14530 5270ba7e25f62242c73d43dbaf761e0f 425 SUPERFAMILY SSF51735 163 421 3.65E-84 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS14530 5270ba7e25f62242c73d43dbaf761e0f 425 Gene3D G3DSA:3.40.50.720 161 422 3.0E-83 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS06075 48d559bf4f6692f20c1e6f82bf990fa7 430 TIGRFAM TIGR01285 nifN: nitrogenase molybdenum-iron cofactor biosynthesis protein NifN 14 428 6.4E-111 T 11-11-2016 IPR005975 Nitrogenase molybdenum-iron cofactor biosynthesis protein GO:0006461|GO:0009399 SHALO_RS06075 48d559bf4f6692f20c1e6f82bf990fa7 430 Gene3D G3DSA:3.40.50.1980 26 163 1.9E-36 T 11-11-2016 SHALO_RS06075 48d559bf4f6692f20c1e6f82bf990fa7 430 Gene3D G3DSA:1.20.89.10 269 345 1.3E-14 T 11-11-2016 SHALO_RS06075 48d559bf4f6692f20c1e6f82bf990fa7 430 SUPERFAMILY SSF53807 7 429 9.48E-94 T 11-11-2016 SHALO_RS06075 48d559bf4f6692f20c1e6f82bf990fa7 430 Gene3D G3DSA:3.40.50.1980 166 261 3.4E-18 T 11-11-2016 SHALO_RS06075 48d559bf4f6692f20c1e6f82bf990fa7 430 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 26 427 7.4E-80 T 11-11-2016 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 SHALO_RS06075 48d559bf4f6692f20c1e6f82bf990fa7 430 ProSitePatterns PS00699 Nitrogenases component 1 alpha and beta subunits signature 1. 44 51 - T 11-11-2016 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 SHALO_RS13930 15f95251695220a28935929e11cd36b2 432 Hamap MF_00303 Trigger factor [tig]. 1 432 18.362 T 11-11-2016 IPR005215 Trigger factor GO:0015031 SHALO_RS13930 15f95251695220a28935929e11cd36b2 432 Gene3D G3DSA:1.10.3120.10 225 405 6.9E-34 T 11-11-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 SHALO_RS13930 15f95251695220a28935929e11cd36b2 432 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 270 428 1.8E-27 T 11-11-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 SHALO_RS13930 15f95251695220a28935929e11cd36b2 432 SUPERFAMILY SSF54534 134 252 1.08E-26 T 11-11-2016 SHALO_RS13930 15f95251695220a28935929e11cd36b2 432 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 159 242 3.9E-12 T 11-11-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 SHALO_RS13930 15f95251695220a28935929e11cd36b2 432 SUPERFAMILY SSF109998 257 431 7.65E-27 T 11-11-2016 IPR027304 Trigger factor/SurA domain SHALO_RS13930 15f95251695220a28935929e11cd36b2 432 Gene3D G3DSA:3.10.50.40 153 224 3.7E-7 T 11-11-2016 SHALO_RS13930 15f95251695220a28935929e11cd36b2 432 Gene3D G3DSA:3.30.70.1050 1 119 4.2E-24 T 11-11-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 SHALO_RS13930 15f95251695220a28935929e11cd36b2 432 PIRSF PIRSF003095 1 432 1.1E-92 T 11-11-2016 IPR005215 Trigger factor GO:0015031 SHALO_RS13930 15f95251695220a28935929e11cd36b2 432 TIGRFAM TIGR00115 tig: trigger factor 12 427 7.2E-102 T 11-11-2016 IPR005215 Trigger factor GO:0015031 SHALO_RS13930 15f95251695220a28935929e11cd36b2 432 SUPERFAMILY SSF102735 1 129 1.83E-23 T 11-11-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 SHALO_RS13930 15f95251695220a28935929e11cd36b2 432 Pfam PF05697 Bacterial trigger factor protein (TF) 1 145 5.0E-28 T 11-11-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 SHALO_RS05665 79c15bdb54e1bbb4e2907e3a8e9dddfb 270 Pfam PF08668 HDOD domain 12 212 3.1E-34 T 11-11-2016 IPR013976 Metal-dependent hydrolase HDOD SHALO_RS05665 79c15bdb54e1bbb4e2907e3a8e9dddfb 270 Gene3D G3DSA:1.10.3150.10 3 269 6.9E-57 T 11-11-2016 IPR013976 Metal-dependent hydrolase HDOD SHALO_RS05665 79c15bdb54e1bbb4e2907e3a8e9dddfb 270 SUPERFAMILY SSF109604 3 268 1.73E-48 T 11-11-2016 SHALO_RS04625 be02d78d77ae5d9d3e698a8d2b3b2bcd 555 Pfam PF13414 TPR repeat 173 211 4.6E-11 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SHALO_RS04625 be02d78d77ae5d9d3e698a8d2b3b2bcd 555 Gene3D G3DSA:1.25.40.10 2 98 3.0E-32 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SHALO_RS04625 be02d78d77ae5d9d3e698a8d2b3b2bcd 555 Pfam PF00515 Tetratricopeptide repeat 27 60 1.4E-10 T 11-11-2016 IPR001440 Tetratricopeptide repeat 1 GO:0005515 SHALO_RS04625 be02d78d77ae5d9d3e698a8d2b3b2bcd 555 Pfam PF00515 Tetratricopeptide repeat 95 128 2.3E-11 T 11-11-2016 IPR001440 Tetratricopeptide repeat 1 GO:0005515 SHALO_RS04625 be02d78d77ae5d9d3e698a8d2b3b2bcd 555 Pfam PF00515 Tetratricopeptide repeat 129 162 8.5E-11 T 11-11-2016 IPR001440 Tetratricopeptide repeat 1 GO:0005515 SHALO_RS04625 be02d78d77ae5d9d3e698a8d2b3b2bcd 555 SUPERFAMILY SSF53756 285 548 1.66E-24 T 11-11-2016 SHALO_RS04625 be02d78d77ae5d9d3e698a8d2b3b2bcd 555 Gene3D G3DSA:1.25.40.10 99 180 4.3E-34 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SHALO_RS04625 be02d78d77ae5d9d3e698a8d2b3b2bcd 555 SUPERFAMILY SSF48452 92 256 3.79E-44 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SHALO_RS04625 be02d78d77ae5d9d3e698a8d2b3b2bcd 555 SUPERFAMILY SSF48452 2 144 1.08E-37 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SHALO_RS04625 be02d78d77ae5d9d3e698a8d2b3b2bcd 555 Gene3D G3DSA:3.40.50.2000 423 522 2.5E-11 T 11-11-2016 SHALO_RS04625 be02d78d77ae5d9d3e698a8d2b3b2bcd 555 Pfam PF13181 Tetratricopeptide repeat 62 93 0.0012 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SHALO_RS04625 be02d78d77ae5d9d3e698a8d2b3b2bcd 555 SMART SM00028 129 162 5.1E-9 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SHALO_RS04625 be02d78d77ae5d9d3e698a8d2b3b2bcd 555 SMART SM00028 27 60 8.5E-9 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SHALO_RS04625 be02d78d77ae5d9d3e698a8d2b3b2bcd 555 SMART SM00028 197 230 3.5E-7 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SHALO_RS04625 be02d78d77ae5d9d3e698a8d2b3b2bcd 555 SMART SM00028 1 26 460.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SHALO_RS04625 be02d78d77ae5d9d3e698a8d2b3b2bcd 555 SMART SM00028 95 128 4.2E-9 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SHALO_RS04625 be02d78d77ae5d9d3e698a8d2b3b2bcd 555 SMART SM00028 163 196 1.5E-7 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SHALO_RS04625 be02d78d77ae5d9d3e698a8d2b3b2bcd 555 SMART SM00028 61 94 1.4E-4 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SHALO_RS04625 be02d78d77ae5d9d3e698a8d2b3b2bcd 555 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 471 501 5.3E-5 T 11-11-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 SHALO_RS04625 be02d78d77ae5d9d3e698a8d2b3b2bcd 555 Gene3D G3DSA:1.25.40.10 181 255 8.4E-22 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SHALO_RS08795 ef28c99d0fb071a58ebcf2e4683bbec1 520 Pfam PF14849 YidC periplasmic domain 228 316 2.7E-8 T 11-11-2016 IPR028053 Membrane insertase YidC, N-terminal SHALO_RS08795 ef28c99d0fb071a58ebcf2e4683bbec1 520 Pfam PF02096 60Kd inner membrane protein 328 507 1.4E-62 T 11-11-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 SHALO_RS08795 ef28c99d0fb071a58ebcf2e4683bbec1 520 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 2 326 1.2E-39 T 11-11-2016 IPR028053 Membrane insertase YidC, N-terminal SHALO_RS08795 ef28c99d0fb071a58ebcf2e4683bbec1 520 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 327 507 5.8E-69 T 11-11-2016 IPR028055 Membrane insertase YidC/Oxa1, C-terminal SHALO_RS08795 ef28c99d0fb071a58ebcf2e4683bbec1 520 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 1 509 20.698 T 11-11-2016 IPR019998 Membrane insertase YidC GO:0016021|GO:0051205 SHALO_RS08795 ef28c99d0fb071a58ebcf2e4683bbec1 520 PRINTS PR01900 YidC translocation/secretion protein signature 442 457 1.2E-27 T 11-11-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 SHALO_RS08795 ef28c99d0fb071a58ebcf2e4683bbec1 520 PRINTS PR01900 YidC translocation/secretion protein signature 462 486 1.2E-27 T 11-11-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 SHALO_RS08795 ef28c99d0fb071a58ebcf2e4683bbec1 520 PRINTS PR01900 YidC translocation/secretion protein signature 313 329 1.2E-27 T 11-11-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 SHALO_RS05445 29640c6c554837219e6851e4e2f76ffb 196 Pfam PF02589 Uncharacterised ACR, YkgG family COG1556 96 196 1.8E-16 T 11-11-2016 IPR003741 LUD domain SHALO_RS05445 29640c6c554837219e6851e4e2f76ffb 196 SUPERFAMILY SSF100950 32 196 6.28E-31 T 11-11-2016 SHALO_RS05445 29640c6c554837219e6851e4e2f76ffb 196 Gene3D G3DSA:3.40.50.10420 32 195 1.2E-33 T 11-11-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain SHALO_RS03450 e47567be2e1f208726ade99f86c815c4 196 Pfam PF01618 MotA/TolQ/ExbB proton channel family 83 179 1.6E-28 T 11-11-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 SHALO_RS10420 d8ac1173629bf229bacd5bf34018f117 296 SUPERFAMILY SSF103481 47 146 1.7E-10 T 11-11-2016 SHALO_RS10420 d8ac1173629bf229bacd5bf34018f117 296 SUPERFAMILY SSF103481 191 289 3.4E-5 T 11-11-2016 SHALO_RS10420 d8ac1173629bf229bacd5bf34018f117 296 Pfam PF00892 EamA-like transporter family 157 287 4.3E-14 T 11-11-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SHALO_RS10420 d8ac1173629bf229bacd5bf34018f117 296 Pfam PF00892 EamA-like transporter family 7 144 1.2E-16 T 11-11-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SHALO_RS14780 d93c54dfb7f567ad5f2d05db595180ec 207 Pfam PF13649 Methyltransferase domain 37 128 1.2E-8 T 11-11-2016 SHALO_RS14780 d93c54dfb7f567ad5f2d05db595180ec 207 Gene3D G3DSA:3.40.50.150 2 199 5.8E-20 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS14780 d93c54dfb7f567ad5f2d05db595180ec 207 SUPERFAMILY SSF53335 3 165 1.66E-19 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS08715 b1b807e661676543b4d57b90b443e898 156 Gene3D G3DSA:3.90.79.10 4 151 7.0E-26 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SHALO_RS08715 b1b807e661676543b4d57b90b443e898 156 Pfam PF00293 NUDIX domain 7 144 2.8E-21 T 11-11-2016 IPR000086 NUDIX hydrolase domain GO:0016787 SHALO_RS08715 b1b807e661676543b4d57b90b443e898 156 PRINTS PR00502 NUDIX hydrolase family signature 52 67 1.7E-6 T 11-11-2016 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 SHALO_RS08715 b1b807e661676543b4d57b90b443e898 156 PRINTS PR00502 NUDIX hydrolase family signature 38 52 1.7E-6 T 11-11-2016 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 SHALO_RS08715 b1b807e661676543b4d57b90b443e898 156 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 155 30.332 T 11-11-2016 IPR022927 RNA pyrophosphohydrolase RppH SHALO_RS08715 b1b807e661676543b4d57b90b443e898 156 SUPERFAMILY SSF55811 5 150 8.8E-25 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SHALO_RS08715 b1b807e661676543b4d57b90b443e898 156 ProSitePatterns PS00893 Nudix box signature. 43 64 - T 11-11-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 SHALO_RS00085 b9c552dcad5343ac61250d181198d40c 416 Gene3D G3DSA:3.30.499.10 4 156 6.3E-30 T 11-11-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 SHALO_RS00085 b9c552dcad5343ac61250d181198d40c 416 Hamap MF_01027 3-isopropylmalate dehydratase large subunit [leuC]. 1 415 43.691 T 11-11-2016 IPR011826 Homoaconitase/3-isopropylmalate dehydratase, large subunit, prokaryotic GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 SHALO_RS00085 b9c552dcad5343ac61250d181198d40c 416 SUPERFAMILY SSF53732 5 415 5.89E-129 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 SHALO_RS00085 b9c552dcad5343ac61250d181198d40c 416 Pfam PF00330 Aconitase family (aconitate hydratase) 44 407 1.1E-89 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 SHALO_RS00085 b9c552dcad5343ac61250d181198d40c 416 TIGRFAM TIGR01343 hacA_fam: homoaconitate hydratase family protein 4 412 2.7E-153 T 11-11-2016 IPR006251 Homoaconitase/3-isopropylmalate dehydratase, large subunit GO:0008652|GO:0016836|GO:0051539 KEGG: 00290+4.2.1.33 SHALO_RS00085 b9c552dcad5343ac61250d181198d40c 416 Gene3D G3DSA:3.40.1060.10 157 261 2.2E-27 T 11-11-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 SHALO_RS00085 b9c552dcad5343ac61250d181198d40c 416 Gene3D G3DSA:3.30.499.10 270 415 6.7E-50 T 11-11-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 SHALO_RS00085 b9c552dcad5343ac61250d181198d40c 416 PRINTS PR00415 Aconitase family signature 124 139 1.3E-17 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 SHALO_RS00085 b9c552dcad5343ac61250d181198d40c 416 PRINTS PR00415 Aconitase family signature 348 361 1.3E-17 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 SHALO_RS00085 b9c552dcad5343ac61250d181198d40c 416 PRINTS PR00415 Aconitase family signature 200 213 1.3E-17 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 SHALO_RS00085 b9c552dcad5343ac61250d181198d40c 416 PRINTS PR00415 Aconitase family signature 110 123 1.3E-17 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 SHALO_RS00085 b9c552dcad5343ac61250d181198d40c 416 TIGRFAM TIGR02086 IPMI_arch: 3-isopropylmalate dehydratase, large subunit 3 412 1.9E-151 T 11-11-2016 IPR011826 Homoaconitase/3-isopropylmalate dehydratase, large subunit, prokaryotic GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 SHALO_RS11880 30f1ef5760280ccec1013e26ceb2c8bd 272 Pfam PF00005 ABC transporter 40 197 2.0E-31 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_RS11880 30f1ef5760280ccec1013e26ceb2c8bd 272 ProSitePatterns PS00211 ABC transporters family signature. 169 183 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHALO_RS11880 30f1ef5760280ccec1013e26ceb2c8bd 272 SUPERFAMILY SSF52540 24 258 4.42E-60 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS11880 30f1ef5760280ccec1013e26ceb2c8bd 272 SMART SM00382 49 259 5.9E-14 T 11-11-2016 IPR003593 AAA+ ATPase domain SHALO_RS11880 30f1ef5760280ccec1013e26ceb2c8bd 272 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 25 272 2.7E-123 T 11-11-2016 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 SHALO_RS11880 30f1ef5760280ccec1013e26ceb2c8bd 272 Gene3D G3DSA:3.40.50.300 20 264 7.8E-69 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS13070 16c4328e0c7b98082180745a8e8737af 616 PRINTS PR00344 Bacterial sensor protein C-terminal signature 565 575 3.1E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS13070 16c4328e0c7b98082180745a8e8737af 616 PRINTS PR00344 Bacterial sensor protein C-terminal signature 576 594 3.1E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS13070 16c4328e0c7b98082180745a8e8737af 616 PRINTS PR00344 Bacterial sensor protein C-terminal signature 600 613 3.1E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS13070 16c4328e0c7b98082180745a8e8737af 616 PRINTS PR00344 Bacterial sensor protein C-terminal signature 547 561 3.1E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS13070 16c4328e0c7b98082180745a8e8737af 616 Gene3D G3DSA:3.30.565.10 462 612 1.7E-31 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS13070 16c4328e0c7b98082180745a8e8737af 616 Gene3D G3DSA:3.40.50.2300 151 290 1.0E-4 T 11-11-2016 SHALO_RS13070 16c4328e0c7b98082180745a8e8737af 616 SUPERFAMILY SSF47384 387 454 6.87E-8 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS13070 16c4328e0c7b98082180745a8e8737af 616 SUPERFAMILY SSF55874 459 612 1.57E-30 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS13070 16c4328e0c7b98082180745a8e8737af 616 SMART SM00387 502 616 8.6E-18 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS13070 16c4328e0c7b98082180745a8e8737af 616 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 504 612 5.8E-18 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS13070 16c4328e0c7b98082180745a8e8737af 616 Pfam PF04392 ABC transporter substrate binding protein 84 285 2.5E-6 T 11-11-2016 IPR007487 ABC transporter, substrate-binding protein SHALO_RS13070 16c4328e0c7b98082180745a8e8737af 616 Gene3D G3DSA:1.10.287.130 389 452 2.2E-4 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS08470 9e2add052ae572a8c8ce4c98a3d75cbf 420 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 3 419 7.4E-166 T 11-11-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 SHALO_RS08470 9e2add052ae572a8c8ce4c98a3d75cbf 420 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 4 419 7.1E-129 T 11-11-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 SHALO_RS08470 9e2add052ae572a8c8ce4c98a3d75cbf 420 PIRSF PIRSF001434 1 420 6.3E-122 T 11-11-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 SHALO_RS08470 9e2add052ae572a8c8ce4c98a3d75cbf 420 SUPERFAMILY SSF53383 1 419 3.36E-105 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase SHALO_RS08470 9e2add052ae572a8c8ce4c98a3d75cbf 420 Gene3D G3DSA:3.40.640.10 2 284 3.5E-96 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SHALO_RS08470 9e2add052ae572a8c8ce4c98a3d75cbf 420 Gene3D G3DSA:3.90.1150.10 286 419 3.4E-46 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SHALO_RS13325 0875666139fda095b005acfc9d35c940 186 Pfam PF00384 Molybdopterin oxidoreductase 112 181 1.7E-14 T 11-11-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS13325 0875666139fda095b005acfc9d35c940 186 SUPERFAMILY SSF53706 54 186 1.44E-50 T 11-11-2016 SHALO_RS13325 0875666139fda095b005acfc9d35c940 186 Gene3D G3DSA:2.20.25.90 55 113 3.9E-17 T 11-11-2016 SHALO_RS13325 0875666139fda095b005acfc9d35c940 186 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 56 107 2.2E-12 T 11-11-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS13325 0875666139fda095b005acfc9d35c940 186 Gene3D G3DSA:3.40.50.740 114 183 2.4E-23 T 11-11-2016 SHALO_RS13325 0875666139fda095b005acfc9d35c940 186 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 60 77 - T 11-11-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 SHALO_RS13325 0875666139fda095b005acfc9d35c940 186 SMART SM00926 55 109 5.6E-14 T 11-11-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS08290 8a5761ea5154cb8ef244900b12b3049a 414 Pfam PF04055 Radical SAM superfamily 137 300 3.5E-21 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SHALO_RS08290 8a5761ea5154cb8ef244900b12b3049a 414 TIGRFAM TIGR01579 MiaB-like-C: MiaB-like tRNA modifying enzyme 6 400 1.4E-121 T 11-11-2016 IPR006467 MiaB-like tRNA modifying enzyme GO:0016740 SHALO_RS08290 8a5761ea5154cb8ef244900b12b3049a 414 Pfam PF00919 Uncharacterized protein family UPF0004 3 89 1.1E-18 T 11-11-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 SHALO_RS08290 8a5761ea5154cb8ef244900b12b3049a 414 SUPERFAMILY SSF102114 117 354 4.19E-45 T 11-11-2016 SHALO_RS08290 8a5761ea5154cb8ef244900b12b3049a 414 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 136 156 - T 11-11-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 SHALO_RS08290 8a5761ea5154cb8ef244900b12b3049a 414 SMART SM00729 132 345 2.6E-41 T 11-11-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 SHALO_RS08290 8a5761ea5154cb8ef244900b12b3049a 414 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 3 411 4.1E-103 T 11-11-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 SHALO_RS08290 8a5761ea5154cb8ef244900b12b3049a 414 Gene3D G3DSA:3.80.30.20 131 357 1.1E-58 T 11-11-2016 IPR023404 Radical SAM, alpha/beta horseshoe SHALO_RS12175 f60314155eddd0d1f9e9cdbca0fc254e 78 SMART SM00739 6 33 3.0E-7 T 11-11-2016 IPR005824 KOW SHALO_RS12175 f60314155eddd0d1f9e9cdbca0fc254e 78 SUPERFAMILY SSF50104 4 75 8.28E-25 T 11-11-2016 IPR008991 Translation protein SH3-like domain SHALO_RS12175 f60314155eddd0d1f9e9cdbca0fc254e 78 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 4 76 8.8E-27 T 11-11-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS12175 f60314155eddd0d1f9e9cdbca0fc254e 78 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 5 78 15.719 T 11-11-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS12175 f60314155eddd0d1f9e9cdbca0fc254e 78 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 42 76 1.7E-8 T 11-11-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS12175 f60314155eddd0d1f9e9cdbca0fc254e 78 Gene3D G3DSA:2.30.30.30 3 76 5.8E-22 T 11-11-2016 IPR014722 Ribosomal protein L2 domain 2 SHALO_RS12175 f60314155eddd0d1f9e9cdbca0fc254e 78 Pfam PF00467 KOW motif 9 40 5.4E-9 T 11-11-2016 IPR005824 KOW SHALO_RS12175 f60314155eddd0d1f9e9cdbca0fc254e 78 ProSitePatterns PS01108 Ribosomal protein L24 signature. 10 27 - T 11-11-2016 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_RS03150 12565b5892526c335fa56883e4b18012 443 SUPERFAMILY SSF56935 192 443 5.95E-5 T 11-11-2016 SHALO_RS03150 12565b5892526c335fa56883e4b18012 443 SUPERFAMILY SSF56935 34 157 5.95E-5 T 11-11-2016 SHALO_RS03150 12565b5892526c335fa56883e4b18012 443 Pfam PF03573 outer membrane porin, OprD family 110 176 1.0E-8 T 11-11-2016 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 SHALO_RS03150 12565b5892526c335fa56883e4b18012 443 Gene3D G3DSA:2.40.160.10 34 443 1.8E-51 T 11-11-2016 IPR023614 Porin domain SHALO_RS14045 9b4a51b36a62b142e3c5268d4e6f399f 219 SUPERFAMILY SSF46689 4 81 3.94E-10 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 SHALO_RS14045 9b4a51b36a62b142e3c5268d4e6f399f 219 Gene3D G3DSA:1.10.10.60 9 81 8.5E-10 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 SHALO_RS14045 9b4a51b36a62b142e3c5268d4e6f399f 219 Pfam PF01527 Transposase 3 76 1.4E-7 T 11-11-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SHALO_RS14045 9b4a51b36a62b142e3c5268d4e6f399f 219 Pfam PF13276 HTH-like domain 144 196 5.8E-11 T 11-11-2016 IPR025948 HTH-like domain SHALO_RS09125 d7afc96382be3667cd98407afaa92f00 733 Gene3D G3DSA:3.30.1330.10 45 194 8.0E-47 T 11-11-2016 IPR016188 PurM-like, N-terminal domain SHALO_RS09125 d7afc96382be3667cd98407afaa92f00 733 Gene3D G3DSA:3.30.1330.10 415 561 5.0E-52 T 11-11-2016 IPR016188 PurM-like, N-terminal domain SHALO_RS09125 d7afc96382be3667cd98407afaa92f00 733 SUPERFAMILY SSF55326 10 196 1.79E-48 T 11-11-2016 SHALO_RS09125 d7afc96382be3667cd98407afaa92f00 733 Hamap MF_00420 Phosphoribosylformylglycinamidine synthase subunit PurL [purL]. 1 733 297.61 T 11-11-2016 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 SHALO_RS09125 d7afc96382be3667cd98407afaa92f00 733 Gene3D G3DSA:3.90.650.10 250 353 2.2E-4 T 11-11-2016 IPR010918 AIR synthase-related protein, C-terminal domain SHALO_RS09125 d7afc96382be3667cd98407afaa92f00 733 PIRSF PIRSF001587 1 732 5.6E-303 T 11-11-2016 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 SHALO_RS09125 d7afc96382be3667cd98407afaa92f00 733 SUPERFAMILY SSF56042 568 717 8.67E-23 T 11-11-2016 IPR010918 AIR synthase-related protein, C-terminal domain SHALO_RS09125 d7afc96382be3667cd98407afaa92f00 733 TIGRFAM TIGR01736 FGAM_synth_II: phosphoribosylformylglycinamidine synthase II 13 728 2.6E-289 T 11-11-2016 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 SHALO_RS09125 d7afc96382be3667cd98407afaa92f00 733 SUPERFAMILY SSF56042 201 425 2.24E-50 T 11-11-2016 IPR010918 AIR synthase-related protein, C-terminal domain SHALO_RS09125 d7afc96382be3667cd98407afaa92f00 733 Pfam PF02769 AIR synthase related protein, C-terminal domain 203 354 1.8E-30 T 11-11-2016 IPR010918 AIR synthase-related protein, C-terminal domain SHALO_RS09125 d7afc96382be3667cd98407afaa92f00 733 SUPERFAMILY SSF55326 396 565 1.7E-50 T 11-11-2016 SHALO_RS09125 d7afc96382be3667cd98407afaa92f00 733 Pfam PF00586 AIR synthase related protein, N-terminal domain 454 557 5.9E-19 T 11-11-2016 IPR016188 PurM-like, N-terminal domain SHALO_RS09125 d7afc96382be3667cd98407afaa92f00 733 Pfam PF00586 AIR synthase related protein, N-terminal domain 82 188 2.7E-22 T 11-11-2016 IPR016188 PurM-like, N-terminal domain SHALO_RS03710 c01ccb19dba084615167a090b424872d 189 SUPERFAMILY SSF111304 4 188 3.4E-57 T 11-11-2016 IPR023627 Recombination protein RecR SHALO_RS03710 c01ccb19dba084615167a090b424872d 189 ProSitePatterns PS01300 RecR protein signature. 58 79 - T 11-11-2016 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 SHALO_RS03710 c01ccb19dba084615167a090b424872d 189 Pfam PF13662 Toprim domain 82 161 1.8E-5 T 11-11-2016 IPR006171 Toprim domain SHALO_RS03710 c01ccb19dba084615167a090b424872d 189 TIGRFAM TIGR00615 recR: recombination protein RecR 6 187 2.7E-57 T 11-11-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 SHALO_RS03710 c01ccb19dba084615167a090b424872d 189 Pfam PF02132 RecR protein 41 79 6.3E-14 T 11-11-2016 IPR023628 Recombination protein RecR, C4-type zinc finger SHALO_RS03710 c01ccb19dba084615167a090b424872d 189 Hamap MF_00017 Recombination protein RecR [recR]. 1 189 61.626 T 11-11-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 SHALO_RS12800 97366df205a15d325d56c181295173a3 475 Pfam PF03824 High-affinity nickel-transport protein 383 446 5.3E-8 T 11-11-2016 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 SHALO_RS12800 97366df205a15d325d56c181295173a3 475 Pfam PF03824 High-affinity nickel-transport protein 257 359 1.5E-12 T 11-11-2016 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 SHALO_RS12800 97366df205a15d325d56c181295173a3 475 ProSitePatterns PS00018 EF-hand calcium-binding domain. 66 78 - T 11-11-2016 IPR018247 EF-Hand 1, calcium-binding site SHALO_RS12380 d887c3a9e4addb29539a30b4e0046144 673 Pfam PF01627 Hpt domain 6 93 1.1E-13 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SHALO_RS12380 d887c3a9e4addb29539a30b4e0046144 673 SMART SM00260 533 673 1.8E-26 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SHALO_RS12380 d887c3a9e4addb29539a30b4e0046144 673 SUPERFAMILY SSF47384 294 355 3.65E-8 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS12380 d887c3a9e4addb29539a30b4e0046144 673 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 294 353 1.4E-7 T 11-11-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 SHALO_RS12380 d887c3a9e4addb29539a30b4e0046144 673 Gene3D G3DSA:2.40.50.180 564 628 6.8E-10 T 11-11-2016 SHALO_RS12380 d887c3a9e4addb29539a30b4e0046144 673 Pfam PF01584 CheW-like domain 546 672 6.4E-18 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SHALO_RS12380 d887c3a9e4addb29539a30b4e0046144 673 SUPERFAMILY SSF47226 4 124 2.75E-26 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SHALO_RS12380 d887c3a9e4addb29539a30b4e0046144 673 SMART SM00073 2 100 2.7E-21 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SHALO_RS12380 d887c3a9e4addb29539a30b4e0046144 673 Gene3D G3DSA:3.30.565.10 355 540 2.1E-35 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS12380 d887c3a9e4addb29539a30b4e0046144 673 SMART SM01231 292 354 1.8E-7 T 11-11-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 SHALO_RS12380 d887c3a9e4addb29539a30b4e0046144 673 Gene3D G3DSA:1.20.120.160 3 131 1.3E-32 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SHALO_RS12380 d887c3a9e4addb29539a30b4e0046144 673 PRINTS PR00344 Bacterial sensor protein C-terminal signature 445 459 1.3E-13 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS12380 d887c3a9e4addb29539a30b4e0046144 673 PRINTS PR00344 Bacterial sensor protein C-terminal signature 501 519 1.3E-13 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS12380 d887c3a9e4addb29539a30b4e0046144 673 PRINTS PR00344 Bacterial sensor protein C-terminal signature 525 538 1.3E-13 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS12380 d887c3a9e4addb29539a30b4e0046144 673 SUPERFAMILY SSF55874 352 544 2.23E-38 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS12380 d887c3a9e4addb29539a30b4e0046144 673 SUPERFAMILY SSF50341 540 672 3.4E-25 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SHALO_RS12380 d887c3a9e4addb29539a30b4e0046144 673 SMART SM00387 399 541 6.8E-23 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS12380 d887c3a9e4addb29539a30b4e0046144 673 Gene3D G3DSA:1.10.287.560 294 354 1.3E-11 T 11-11-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 SHALO_RS12380 d887c3a9e4addb29539a30b4e0046144 673 Gene3D G3DSA:2.30.30.40 629 672 6.8E-21 T 11-11-2016 SHALO_RS12380 d887c3a9e4addb29539a30b4e0046144 673 Gene3D G3DSA:2.30.30.40 541 562 6.8E-21 T 11-11-2016 SHALO_RS12380 d887c3a9e4addb29539a30b4e0046144 673 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 401 540 6.2E-18 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS11380 3b308671c709604b774e2fa9133619e2 623 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 270 284 - T 11-11-2016 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 SHALO_RS11380 3b308671c709604b774e2fa9133619e2 623 SUPERFAMILY SSF51905 93 258 6.02E-44 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHALO_RS11380 3b308671c709604b774e2fa9133619e2 623 SUPERFAMILY SSF51905 1 62 6.02E-44 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHALO_RS11380 3b308671c709604b774e2fa9133619e2 623 Gene3D G3DSA:3.50.50.60 1 169 8.9E-33 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHALO_RS11380 3b308671c709604b774e2fa9133619e2 623 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 9.4E-5 T 11-11-2016 SHALO_RS11380 3b308671c709604b774e2fa9133619e2 623 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 144 162 9.4E-5 T 11-11-2016 SHALO_RS11380 3b308671c709604b774e2fa9133619e2 623 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 3 617 2.0E-268 T 11-11-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 SHALO_RS11380 3b308671c709604b774e2fa9133619e2 623 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 1 620 40.249 T 11-11-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 SHALO_RS11380 3b308671c709604b774e2fa9133619e2 623 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 365 388 - T 11-11-2016 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 SHALO_RS11380 3b308671c709604b774e2fa9133619e2 623 Pfam PF01134 Glucose inhibited division protein A 4 395 7.4E-159 T 11-11-2016 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 SHALO_RS11380 3b308671c709604b774e2fa9133619e2 623 Pfam PF13932 GidA associated domain 398 611 3.5E-65 T 11-11-2016 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 SHALO_RS11380 3b308671c709604b774e2fa9133619e2 623 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 9.5E-6 T 11-11-2016 SHALO_RS11380 3b308671c709604b774e2fa9133619e2 623 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 156 9.5E-6 T 11-11-2016 SHALO_RS11380 3b308671c709604b774e2fa9133619e2 623 SMART SM01228 542 613 1.0E-32 T 11-11-2016 SHALO_RS12360 fafbc022c4fc0bba0d007ba0bc299fa1 340 Pfam PF01339 CheB methylesterase 157 335 4.5E-59 T 11-11-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 SHALO_RS12360 fafbc022c4fc0bba0d007ba0bc299fa1 340 Gene3D G3DSA:3.40.50.2300 1 109 4.8E-28 T 11-11-2016 SHALO_RS12360 fafbc022c4fc0bba0d007ba0bc299fa1 340 PIRSF PIRSF000876 1 340 1.7E-129 T 11-11-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 SHALO_RS12360 fafbc022c4fc0bba0d007ba0bc299fa1 340 SMART SM00448 2 125 2.7E-23 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS12360 fafbc022c4fc0bba0d007ba0bc299fa1 340 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 2 340 39.109 T 11-11-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 SHALO_RS12360 fafbc022c4fc0bba0d007ba0bc299fa1 340 Gene3D G3DSA:3.40.50.180 150 339 1.4E-77 T 11-11-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 SHALO_RS12360 fafbc022c4fc0bba0d007ba0bc299fa1 340 Pfam PF00072 Response regulator receiver domain 4 107 7.2E-24 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS12360 fafbc022c4fc0bba0d007ba0bc299fa1 340 SUPERFAMILY SSF52172 1 108 4.98E-28 T 11-11-2016 IPR011006 CheY-like superfamily SHALO_RS12360 fafbc022c4fc0bba0d007ba0bc299fa1 340 SUPERFAMILY SSF52738 152 338 1.83E-69 T 11-11-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 SHALO_RS10875 a9b5266c8408166070595b0064ef65b3 248 SUPERFAMILY SSF48179 144 247 5.61E-26 T 11-11-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SHALO_RS10875 a9b5266c8408166070595b0064ef65b3 248 Gene3D G3DSA:3.40.50.720 2 140 6.3E-20 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS10875 a9b5266c8408166070595b0064ef65b3 248 Gene3D G3DSA:1.10.3730.10 144 244 2.4E-29 T 11-11-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 SHALO_RS10875 a9b5266c8408166070595b0064ef65b3 248 PIRSF PIRSF000193 1 248 8.2E-57 T 11-11-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 SHALO_RS10875 a9b5266c8408166070595b0064ef65b3 248 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 4 244 2.8E-60 T 11-11-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 SHALO_RS10875 a9b5266c8408166070595b0064ef65b3 248 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 4 85 8.0E-5 T 11-11-2016 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal SHALO_RS10875 a9b5266c8408166070595b0064ef65b3 248 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 1 246 22.564 T 11-11-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 SHALO_RS10875 a9b5266c8408166070595b0064ef65b3 248 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 144 245 8.7E-31 T 11-11-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 SHALO_RS10875 a9b5266c8408166070595b0064ef65b3 248 SUPERFAMILY SSF51735 1 141 1.64E-15 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS01665 d405d3e699d70a1a8567a2b477b34b03 299 Gene3D G3DSA:1.10.10.60 243 285 5.2E-12 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 SHALO_RS01665 d405d3e699d70a1a8567a2b477b34b03 299 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 242 284 - T 11-11-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 SHALO_RS01665 d405d3e699d70a1a8567a2b477b34b03 299 Pfam PF06719 AraC-type transcriptional regulator N-terminus 26 176 3.3E-46 T 11-11-2016 IPR009594 Transcription regulator HTH, AraC, N-terminal SHALO_RS01665 d405d3e699d70a1a8567a2b477b34b03 299 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 190 234 - T 11-11-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 SHALO_RS01665 d405d3e699d70a1a8567a2b477b34b03 299 SUPERFAMILY SSF46689 241 286 1.84E-9 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 SHALO_RS01665 d405d3e699d70a1a8567a2b477b34b03 299 SMART SM00342 205 288 3.5E-25 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SHALO_RS01665 d405d3e699d70a1a8567a2b477b34b03 299 SUPERFAMILY SSF46689 189 239 2.69E-9 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 SHALO_RS01665 d405d3e699d70a1a8567a2b477b34b03 299 Gene3D G3DSA:1.10.10.60 185 242 4.6E-16 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 SHALO_RS01665 d405d3e699d70a1a8567a2b477b34b03 299 Pfam PF12833 Helix-turn-helix domain 211 285 1.3E-20 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SHALO_RS08750 da1e2d5ef82459e3e767a7e64eb43093 410 SMART SM00388 209 267 4.4E-6 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS08750 da1e2d5ef82459e3e767a7e64eb43093 410 Pfam PF00672 HAMP domain 139 203 3.6E-12 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SHALO_RS08750 da1e2d5ef82459e3e767a7e64eb43093 410 SMART SM00304 156 208 5.6E-7 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SHALO_RS08750 da1e2d5ef82459e3e767a7e64eb43093 410 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 313 396 1.6E-5 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS08750 da1e2d5ef82459e3e767a7e64eb43093 410 Gene3D G3DSA:3.30.565.10 292 397 8.3E-14 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS08750 da1e2d5ef82459e3e767a7e64eb43093 410 SUPERFAMILY SSF55874 274 398 1.96E-16 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS08750 da1e2d5ef82459e3e767a7e64eb43093 410 SUPERFAMILY SSF158472 159 205 9.15E-8 T 11-11-2016 SHALO_RS08750 da1e2d5ef82459e3e767a7e64eb43093 410 SUPERFAMILY SSF47384 193 267 3.14E-8 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS08750 da1e2d5ef82459e3e767a7e64eb43093 410 Gene3D G3DSA:1.10.287.130 200 258 2.5E-9 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS08750 da1e2d5ef82459e3e767a7e64eb43093 410 SMART SM00387 308 409 7.7E-8 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS00645 e7e069ead4f12419c5a4b6055a4c8f65 64 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 62 1.5E-20 T 11-11-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 SHALO_RS00645 e7e069ead4f12419c5a4b6055a4c8f65 64 PRINTS PR00064 Ribosomal protein L35 signature 20 34 3.5E-11 T 11-11-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 SHALO_RS00645 e7e069ead4f12419c5a4b6055a4c8f65 64 PRINTS PR00064 Ribosomal protein L35 signature 3 20 3.5E-11 T 11-11-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 SHALO_RS00645 e7e069ead4f12419c5a4b6055a4c8f65 64 PRINTS PR00064 Ribosomal protein L35 signature 35 53 3.5E-11 T 11-11-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 SHALO_RS00645 e7e069ead4f12419c5a4b6055a4c8f65 64 SUPERFAMILY SSF143034 2 62 2.22E-15 T 11-11-2016 SHALO_RS00645 e7e069ead4f12419c5a4b6055a4c8f65 64 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 30 - T 11-11-2016 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_RS00645 e7e069ead4f12419c5a4b6055a4c8f65 64 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 63 15.505 T 11-11-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 SHALO_RS00645 e7e069ead4f12419c5a4b6055a4c8f65 64 Pfam PF01632 Ribosomal protein L35 2 61 5.0E-18 T 11-11-2016 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS13895 594d1fb9ad1acfa3acc8456dadefe9fb 404 Pfam PF03453 MoeA N-terminal region (domain I and II) 8 164 6.7E-26 T 11-11-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 SHALO_RS13895 594d1fb9ad1acfa3acc8456dadefe9fb 404 SMART SM00852 178 317 7.7E-26 T 11-11-2016 IPR001453 MoaB/Mog domain SHALO_RS13895 594d1fb9ad1acfa3acc8456dadefe9fb 404 SUPERFAMILY SSF63867 326 403 4.71E-9 T 11-11-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 SHALO_RS13895 594d1fb9ad1acfa3acc8456dadefe9fb 404 SUPERFAMILY SSF63882 5 172 1.3E-40 T 11-11-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 SHALO_RS13895 594d1fb9ad1acfa3acc8456dadefe9fb 404 Gene3D G3DSA:3.40.980.10 160 323 2.9E-46 T 11-11-2016 IPR001453 MoaB/Mog domain SHALO_RS13895 594d1fb9ad1acfa3acc8456dadefe9fb 404 Gene3D G3DSA:2.170.190.11 49 127 1.4E-19 T 11-11-2016 SHALO_RS13895 594d1fb9ad1acfa3acc8456dadefe9fb 404 Pfam PF00994 Probable molybdopterin binding domain 178 316 8.5E-17 T 11-11-2016 IPR001453 MoaB/Mog domain SHALO_RS13895 594d1fb9ad1acfa3acc8456dadefe9fb 404 Pfam PF03454 MoeA C-terminal region (domain IV) 334 402 2.8E-4 T 11-11-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 SHALO_RS13895 594d1fb9ad1acfa3acc8456dadefe9fb 404 Gene3D G3DSA:2.40.340.10 326 402 3.6E-4 T 11-11-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 SHALO_RS13895 594d1fb9ad1acfa3acc8456dadefe9fb 404 Gene3D G3DSA:3.90.105.10 128 159 2.6E-16 T 11-11-2016 SHALO_RS13895 594d1fb9ad1acfa3acc8456dadefe9fb 404 SUPERFAMILY SSF53218 174 318 4.32E-33 T 11-11-2016 IPR001453 MoaB/Mog domain SHALO_RS09080 1140d945994cc647a702a1f73ec78e6f 145 PIRSF PIRSF036659 5 144 4.4E-48 T 11-11-2016 IPR012187 Disulphide bond formation protein BdbC SHALO_RS09080 1140d945994cc647a702a1f73ec78e6f 145 Gene3D G3DSA:1.20.1550.10 14 105 8.2E-13 T 11-11-2016 IPR023380 Disulphide bond formation protein DsbB-like domain SHALO_RS09080 1140d945994cc647a702a1f73ec78e6f 145 SUPERFAMILY SSF158442 15 139 1.7E-29 T 11-11-2016 SHALO_RS09080 1140d945994cc647a702a1f73ec78e6f 145 Pfam PF02600 Disulfide bond formation protein DsbB 14 138 2.6E-10 T 11-11-2016 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 SHALO_RS09080 1140d945994cc647a702a1f73ec78e6f 145 Hamap MF_00287 Probable disulfide formation protein [bdbC]. 8 143 21.844 T 11-11-2016 IPR012187 Disulphide bond formation protein BdbC SHALO_RS10525 79c611cebce7737befa54fac8349cd01 528 PRINTS PR00344 Bacterial sensor protein C-terminal signature 456 470 7.8E-7 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS10525 79c611cebce7737befa54fac8349cd01 528 PRINTS PR00344 Bacterial sensor protein C-terminal signature 474 484 7.8E-7 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS10525 79c611cebce7737befa54fac8349cd01 528 PRINTS PR00344 Bacterial sensor protein C-terminal signature 509 522 7.8E-7 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS10525 79c611cebce7737befa54fac8349cd01 528 PRINTS PR00344 Bacterial sensor protein C-terminal signature 486 504 7.8E-7 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS10525 79c611cebce7737befa54fac8349cd01 528 Gene3D G3DSA:3.30.450.20 39 177 2.2E-45 T 11-11-2016 SHALO_RS10525 79c611cebce7737befa54fac8349cd01 528 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 321 363 3.2E-8 T 11-11-2016 SHALO_RS10525 79c611cebce7737befa54fac8349cd01 528 SUPERFAMILY SSF103190 44 175 1.06E-35 T 11-11-2016 IPR029151 Periplasmic sensor domain-like SHALO_RS10525 79c611cebce7737befa54fac8349cd01 528 Pfam PF17203 Single cache domain 3 44 176 8.5E-22 T 11-11-2016 IPR033463 Single cache domain 3 SHALO_RS10525 79c611cebce7737befa54fac8349cd01 528 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 419 523 2.9E-13 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS10525 79c611cebce7737befa54fac8349cd01 528 Gene3D G3DSA:3.30.565.10 353 377 1.4E-20 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS10525 79c611cebce7737befa54fac8349cd01 528 Gene3D G3DSA:3.30.565.10 411 524 1.4E-20 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS10525 79c611cebce7737befa54fac8349cd01 528 Gene3D G3DSA:1.10.287.130 308 352 1.8E-15 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS10525 79c611cebce7737befa54fac8349cd01 528 SMART SM00387 417 525 3.9E-18 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS10525 79c611cebce7737befa54fac8349cd01 528 SUPERFAMILY SSF55890 320 394 2.48E-10 T 11-11-2016 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 SHALO_RS10525 79c611cebce7737befa54fac8349cd01 528 SUPERFAMILY SSF55874 382 523 1.31E-21 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS04210 19fcab78048c4f0a422667cb4f4229d8 419 Gene3D G3DSA:3.90.1150.10 282 418 2.5E-29 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SHALO_RS04210 19fcab78048c4f0a422667cb4f4229d8 419 Pfam PF00266 Aminotransferase class-V 16 406 3.4E-44 T 11-11-2016 IPR000192 Aminotransferase class V domain SHALO_RS04210 19fcab78048c4f0a422667cb4f4229d8 419 Gene3D G3DSA:3.40.640.10 30 281 2.4E-46 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SHALO_RS04210 19fcab78048c4f0a422667cb4f4229d8 419 SUPERFAMILY SSF53383 4 415 1.81E-66 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase SHALO_RS03775 b7a51374c7eabda31d4aeeb15f1aa7a8 355 SMART SM00382 126 260 0.0029 T 11-11-2016 IPR003593 AAA+ ATPase domain SHALO_RS03775 b7a51374c7eabda31d4aeeb15f1aa7a8 355 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 6 348 1.9E-133 T 11-11-2016 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 SHALO_RS03775 b7a51374c7eabda31d4aeeb15f1aa7a8 355 Gene3D G3DSA:3.40.50.300 104 347 9.8E-70 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS03775 b7a51374c7eabda31d4aeeb15f1aa7a8 355 Pfam PF00437 Type II/IV secretion system protein 14 264 3.5E-44 T 11-11-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 SHALO_RS03775 b7a51374c7eabda31d4aeeb15f1aa7a8 355 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 197 211 - T 11-11-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 SHALO_RS03775 b7a51374c7eabda31d4aeeb15f1aa7a8 355 SUPERFAMILY SSF52540 7 342 5.4E-67 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS09870 e7c494f8615cd32f05856e7d37eac92b 536 SUPERFAMILY SSF52540 61 119 1.71E-21 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS09870 e7c494f8615cd32f05856e7d37eac92b 536 SUPERFAMILY SSF52540 276 424 1.71E-21 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS09870 e7c494f8615cd32f05856e7d37eac92b 536 SUPERFAMILY SSF52540 146 203 1.71E-21 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS09870 e7c494f8615cd32f05856e7d37eac92b 536 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 62 406 1.8E-17 T 11-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SHALO_RS09870 e7c494f8615cd32f05856e7d37eac92b 536 Gene3D G3DSA:3.40.50.300 61 187 5.4E-26 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS09870 e7c494f8615cd32f05856e7d37eac92b 536 Gene3D G3DSA:3.40.50.300 246 428 5.4E-26 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS09870 e7c494f8615cd32f05856e7d37eac92b 536 Gene3D G3DSA:3.40.50.300 1 23 5.4E-26 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS05960 8127601f235c92f343fd6277c5d344fa 556 Gene3D G3DSA:3.30.565.10 317 529 1.8E-34 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS05960 8127601f235c92f343fd6277c5d344fa 556 PRINTS PR00775 90kDa heat shock protein signature 420 442 7.0E-7 T 11-11-2016 IPR020575 Heat shock protein Hsp90, N-terminal SHALO_RS05960 8127601f235c92f343fd6277c5d344fa 556 PRINTS PR00775 90kDa heat shock protein signature 336 358 7.0E-7 T 11-11-2016 IPR020575 Heat shock protein Hsp90, N-terminal SHALO_RS05960 8127601f235c92f343fd6277c5d344fa 556 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 342 458 8.2E-16 T 11-11-2016 SHALO_RS05960 8127601f235c92f343fd6277c5d344fa 556 Gene3D G3DSA:1.10.3210.10 132 236 3.2E-8 T 11-11-2016 IPR006674 HD domain SHALO_RS05960 8127601f235c92f343fd6277c5d344fa 556 Gene3D G3DSA:1.10.3210.10 25 96 3.2E-8 T 11-11-2016 IPR006674 HD domain SHALO_RS05960 8127601f235c92f343fd6277c5d344fa 556 SUPERFAMILY SSF55874 320 482 1.96E-30 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS05960 8127601f235c92f343fd6277c5d344fa 556 SUPERFAMILY SSF109604 128 210 7.51E-7 T 11-11-2016 SHALO_RS05960 8127601f235c92f343fd6277c5d344fa 556 SUPERFAMILY SSF109604 25 92 7.51E-7 T 11-11-2016 SHALO_RS03535 2b858014e2bbb2cb8f9451405659435b 119 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 84 108 - T 11-11-2016 IPR020458 Zinc finger, DksA/TraR C4-type conserved site SHALO_RS03535 2b858014e2bbb2cb8f9451405659435b 119 SUPERFAMILY SSF109635 1 80 3.27E-16 T 11-11-2016 SHALO_RS03535 2b858014e2bbb2cb8f9451405659435b 119 SUPERFAMILY SSF57716 81 116 1.71E-8 T 11-11-2016 SHALO_RS03535 2b858014e2bbb2cb8f9451405659435b 119 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 79 114 8.8E-12 T 11-11-2016 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 SHALO_RS13065 1aff05b6076be86a79f6919002bad187 348 PIRSF PIRSF500176 20 348 1.7E-79 T 11-11-2016 SHALO_RS13065 1aff05b6076be86a79f6919002bad187 348 TIGRFAM TIGR00520 asnASE_II: L-asparaginase, type II 18 348 1.0E-137 T 11-11-2016 IPR004550 L-asparaginase, type II GO:0004067|GO:0006528 SHALO_RS13065 1aff05b6076be86a79f6919002bad187 348 SUPERFAMILY SSF53774 22 347 3.01E-101 T 11-11-2016 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 SHALO_RS13065 1aff05b6076be86a79f6919002bad187 348 Pfam PF00710 Asparaginase, N-terminal 24 215 4.5E-59 T 11-11-2016 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 SHALO_RS13065 1aff05b6076be86a79f6919002bad187 348 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 26 34 - T 11-11-2016 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 SHALO_RS13065 1aff05b6076be86a79f6919002bad187 348 PIRSF PIRSF001220 18 348 2.1E-91 T 11-11-2016 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 SHALO_RS13065 1aff05b6076be86a79f6919002bad187 348 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 104 114 - T 11-11-2016 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 SHALO_RS13065 1aff05b6076be86a79f6919002bad187 348 SMART SM00870 23 342 6.7E-140 T 11-11-2016 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 SHALO_RS13065 1aff05b6076be86a79f6919002bad187 348 PRINTS PR00139 Asparaginase/glutaminase family signature 24 35 9.2E-23 T 11-11-2016 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 SHALO_RS13065 1aff05b6076be86a79f6919002bad187 348 PRINTS PR00139 Asparaginase/glutaminase family signature 103 121 9.2E-23 T 11-11-2016 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 SHALO_RS13065 1aff05b6076be86a79f6919002bad187 348 PRINTS PR00139 Asparaginase/glutaminase family signature 282 300 9.2E-23 T 11-11-2016 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 SHALO_RS13065 1aff05b6076be86a79f6919002bad187 348 Gene3D G3DSA:3.40.50.40 235 345 1.0E-36 T 11-11-2016 IPR027473 L-asparaginase, C-terminal domain Reactome: R-HSA-70614 SHALO_RS13065 1aff05b6076be86a79f6919002bad187 348 Gene3D G3DSA:3.40.50.1170 20 230 3.2E-69 T 11-11-2016 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 SHALO_RS03750 14b433c8bfd876a091dd582de02c0f13 415 Pfam PF00464 Serine hydroxymethyltransferase 4 379 5.2E-174 T 11-11-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 SHALO_RS03750 14b433c8bfd876a091dd582de02c0f13 415 PIRSF PIRSF000412 1 410 1.2E-162 T 11-11-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 SHALO_RS03750 14b433c8bfd876a091dd582de02c0f13 415 SUPERFAMILY SSF53383 2 411 5.01E-175 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase SHALO_RS03750 14b433c8bfd876a091dd582de02c0f13 415 Gene3D G3DSA:3.40.640.10 33 279 2.2E-100 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SHALO_RS03750 14b433c8bfd876a091dd582de02c0f13 415 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 217 233 - T 11-11-2016 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0004372|GO:0006544|GO:0006563|GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 SHALO_RS03750 14b433c8bfd876a091dd582de02c0f13 415 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 3 411 50.621 T 11-11-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 SHALO_RS03750 14b433c8bfd876a091dd582de02c0f13 415 Gene3D G3DSA:3.90.1150.10 280 411 1.6E-49 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SHALO_RS03050 300f682a32a05e62bbe20a782487c987 386 Pfam PF00033 Cytochrome b/b6/petB 8 185 2.6E-48 T 11-11-2016 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 SHALO_RS03050 300f682a32a05e62bbe20a782487c987 386 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 259 365 3.2E-20 T 11-11-2016 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 SHALO_RS03050 300f682a32a05e62bbe20a782487c987 386 SUPERFAMILY SSF81342 6 261 2.04E-63 T 11-11-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 SHALO_RS03050 300f682a32a05e62bbe20a782487c987 386 SUPERFAMILY SSF81648 218 357 7.19E-28 T 11-11-2016 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 SHALO_RS03050 300f682a32a05e62bbe20a782487c987 386 Gene3D G3DSA:1.20.810.10 6 380 4.3E-96 T 11-11-2016 IPR027387 Cytochrome b/b6-like domain Reactome: R-HSA-611105 SHALO_RS01675 85aebbcd671843b5ac856e2a791bcdbd 296 SUPERFAMILY SSF46785 1 84 9.49E-16 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS01675 85aebbcd671843b5ac856e2a791bcdbd 296 Pfam PF03466 LysR substrate binding domain 87 289 4.2E-30 T 11-11-2016 IPR005119 LysR, substrate-binding SHALO_RS01675 85aebbcd671843b5ac856e2a791bcdbd 296 Gene3D G3DSA:3.40.190.10 87 221 1.0E-21 T 11-11-2016 SHALO_RS01675 85aebbcd671843b5ac856e2a791bcdbd 296 Gene3D G3DSA:1.10.10.10 1 83 1.8E-17 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS01675 85aebbcd671843b5ac856e2a791bcdbd 296 SUPERFAMILY SSF53850 87 292 9.34E-28 T 11-11-2016 SHALO_RS01675 85aebbcd671843b5ac856e2a791bcdbd 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 3.6E-13 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SHALO_RS01675 85aebbcd671843b5ac856e2a791bcdbd 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.3E-6 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SHALO_RS01675 85aebbcd671843b5ac856e2a791bcdbd 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.3E-6 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SHALO_RS01675 85aebbcd671843b5ac856e2a791bcdbd 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.3E-6 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SHALO_RS05480 9f3532452bf35d50833aab8cfd14bca3 731 SUPERFAMILY SSF51726 4 364 1.57E-90 T 11-11-2016 SHALO_RS05480 9f3532452bf35d50833aab8cfd14bca3 731 SUPERFAMILY SSF51726 381 729 4.19E-107 T 11-11-2016 SHALO_RS05480 9f3532452bf35d50833aab8cfd14bca3 731 Gene3D G3DSA:3.20.20.210 3 372 6.1E-120 T 11-11-2016 SHALO_RS05480 9f3532452bf35d50833aab8cfd14bca3 731 Gene3D G3DSA:3.20.20.210 386 728 4.3E-117 T 11-11-2016 SHALO_RS05480 9f3532452bf35d50833aab8cfd14bca3 731 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 406 726 3.1E-141 T 11-11-2016 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 SHALO_RS05480 9f3532452bf35d50833aab8cfd14bca3 731 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 4 309 2.2E-106 T 11-11-2016 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 SHALO_RS05480 9f3532452bf35d50833aab8cfd14bca3 731 PIRSF PIRSF000382 1 731 0.0 T 11-11-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 SHALO_RS05480 9f3532452bf35d50833aab8cfd14bca3 731 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 8 731 1.5E-293 T 11-11-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 SHALO_RS04025 473bc5e7562d5eb782be393501edbd00 779 Pfam PF03484 tRNA synthetase B5 domain 396 462 1.5E-12 T 11-11-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 SHALO_RS04025 473bc5e7562d5eb782be393501edbd00 779 Gene3D G3DSA:3.30.56.10 1 39 6.9E-20 T 11-11-2016 SHALO_RS04025 473bc5e7562d5eb782be393501edbd00 779 Gene3D G3DSA:3.30.70.380 690 779 5.0E-19 T 11-11-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 SHALO_RS04025 473bc5e7562d5eb782be393501edbd00 779 SUPERFAMILY SSF46955 394 467 2.2E-14 T 11-11-2016 IPR009061 Putative DNA-binding domain SHALO_RS04025 473bc5e7562d5eb782be393501edbd00 779 Pfam PF03147 Ferredoxin-fold anticodon binding domain 687 779 5.5E-20 T 11-11-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 SHALO_RS04025 473bc5e7562d5eb782be393501edbd00 779 Gene3D G3DSA:2.40.50.140 44 215 1.1E-46 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold SHALO_RS04025 473bc5e7562d5eb782be393501edbd00 779 Pfam PF01588 Putative tRNA binding domain 45 139 1.1E-24 T 11-11-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 SHALO_RS04025 473bc5e7562d5eb782be393501edbd00 779 Gene3D G3DSA:3.30.56.20 393 466 1.0E-18 T 11-11-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 SHALO_RS04025 473bc5e7562d5eb782be393501edbd00 779 SUPERFAMILY SSF54991 683 779 4.58E-22 T 11-11-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 SHALO_RS04025 473bc5e7562d5eb782be393501edbd00 779 SUPERFAMILY SSF55681 459 677 1.39E-25 T 11-11-2016 SHALO_RS04025 473bc5e7562d5eb782be393501edbd00 779 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 779 1.8E-184 T 11-11-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 SHALO_RS04025 473bc5e7562d5eb782be393501edbd00 779 Gene3D G3DSA:3.30.930.10 487 677 8.3E-35 T 11-11-2016 SHALO_RS04025 473bc5e7562d5eb782be393501edbd00 779 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 773 31.394 T 11-11-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 SHALO_RS04025 473bc5e7562d5eb782be393501edbd00 779 SUPERFAMILY SSF50249 44 193 5.63E-44 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold SHALO_RS04025 473bc5e7562d5eb782be393501edbd00 779 SMART SM00896 687 779 4.5E-25 T 11-11-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 SHALO_RS04025 473bc5e7562d5eb782be393501edbd00 779 SMART SM00874 393 463 4.6E-16 T 11-11-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 SHALO_RS14860 5521a0901eda21454212dd3d7ff59e79 75 Pfam PF11127 Protein of unknown function (DUF2892) 1 59 3.3E-20 T 11-11-2016 IPR021309 Protein of unknown function DUF2892 SHALO_RS01895 da838cc57efb98dd15ceff6109c96205 286 SUPERFAMILY SSF52096 178 238 3.07E-32 T 11-11-2016 IPR029045 ClpP/crotonase-like domain SHALO_RS01895 da838cc57efb98dd15ceff6109c96205 286 SUPERFAMILY SSF52096 29 149 3.07E-32 T 11-11-2016 IPR029045 ClpP/crotonase-like domain SHALO_RS01895 da838cc57efb98dd15ceff6109c96205 286 Pfam PF01343 Peptidase family S49 103 253 2.5E-47 T 11-11-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 SHALO_RS01895 da838cc57efb98dd15ceff6109c96205 286 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 46 250 1.7E-66 T 11-11-2016 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 SHALO_RS01895 da838cc57efb98dd15ceff6109c96205 286 Gene3D G3DSA:3.90.226.10 27 141 3.3E-46 T 11-11-2016 IPR029045 ClpP/crotonase-like domain SHALO_RS01895 da838cc57efb98dd15ceff6109c96205 286 Gene3D G3DSA:3.90.226.10 179 261 3.3E-46 T 11-11-2016 IPR029045 ClpP/crotonase-like domain SHALO_RS00985 405f1227a83d97f2a255146ed3d7caed 508 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 235 259 8.8E-40 T 11-11-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS00985 405f1227a83d97f2a255146ed3d7caed 508 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 160 184 8.8E-40 T 11-11-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS00985 405f1227a83d97f2a255146ed3d7caed 508 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 323 342 8.8E-40 T 11-11-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS00985 405f1227a83d97f2a255146ed3d7caed 508 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 375 401 8.8E-40 T 11-11-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS00985 405f1227a83d97f2a255146ed3d7caed 508 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 130 149 8.8E-40 T 11-11-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS00985 405f1227a83d97f2a255146ed3d7caed 508 Pfam PF00361 Proton-conducting membrane transporter 126 416 7.1E-68 T 11-11-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS00985 405f1227a83d97f2a255146ed3d7caed 508 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 5 482 2.2E-173 T 11-11-2016 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS06490 a3e2bb358bee66cb06512b3b4c60f15e 237 SUPERFAMILY SSF46894 142 230 4.54E-14 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SHALO_RS06490 a3e2bb358bee66cb06512b3b4c60f15e 237 Gene3D G3DSA:3.40.50.2300 12 167 3.4E-31 T 11-11-2016 SHALO_RS06490 a3e2bb358bee66cb06512b3b4c60f15e 237 SUPERFAMILY SSF52172 11 141 8.68E-33 T 11-11-2016 IPR011006 CheY-like superfamily SHALO_RS06490 a3e2bb358bee66cb06512b3b4c60f15e 237 Pfam PF00072 Response regulator receiver domain 15 124 5.9E-24 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS06490 a3e2bb358bee66cb06512b3b4c60f15e 237 SMART SM00862 160 230 1.0E-11 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS06490 a3e2bb358bee66cb06512b3b4c60f15e 237 Gene3D G3DSA:1.10.10.10 168 230 2.1E-12 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS06490 a3e2bb358bee66cb06512b3b4c60f15e 237 Pfam PF00486 Transcriptional regulatory protein, C terminal 163 229 1.0E-12 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS06490 a3e2bb358bee66cb06512b3b4c60f15e 237 SMART SM00448 13 124 1.2E-24 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS12190 6f83e49111eee4dab2fd459541edf4da 62 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 11-11-2016 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_RS12190 6f83e49111eee4dab2fd459541edf4da 62 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 59 5.8E-20 T 11-11-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_RS12190 6f83e49111eee4dab2fd459541edf4da 62 Gene3D G3DSA:1.10.287.310 1 60 1.8E-18 T 11-11-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_RS12190 6f83e49111eee4dab2fd459541edf4da 62 Pfam PF00831 Ribosomal L29 protein 5 58 1.1E-17 T 11-11-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_RS12190 6f83e49111eee4dab2fd459541edf4da 62 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 15.147 T 11-11-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_RS12190 6f83e49111eee4dab2fd459541edf4da 62 SUPERFAMILY SSF46561 1 59 2.88E-16 T 11-11-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_RS05110 f68ee2b048af219ca45baee385e0d578 350 SMART SM00382 98 234 1.3E-13 T 11-11-2016 IPR003593 AAA+ ATPase domain SHALO_RS05110 f68ee2b048af219ca45baee385e0d578 350 SUPERFAMILY SSF52540 74 294 2.93E-36 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS05110 f68ee2b048af219ca45baee385e0d578 350 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 103 231 7.7E-27 T 11-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SHALO_RS05110 f68ee2b048af219ca45baee385e0d578 350 Gene3D G3DSA:3.40.50.300 80 248 1.2E-34 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS05110 f68ee2b048af219ca45baee385e0d578 350 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 102 120 3.4E-5 T 11-11-2016 IPR001270 ClpA/B family GO:0005524 SHALO_RS05110 f68ee2b048af219ca45baee385e0d578 350 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 200 214 3.4E-5 T 11-11-2016 IPR001270 ClpA/B family GO:0005524 SHALO_RS13040 5b34c5a39979c353cb614f5ec294c89d 277 Pfam PF13649 Methyltransferase domain 61 131 1.1E-9 T 11-11-2016 SHALO_RS13040 5b34c5a39979c353cb614f5ec294c89d 277 SUPERFAMILY SSF53335 18 142 8.44E-21 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS13040 5b34c5a39979c353cb614f5ec294c89d 277 Gene3D G3DSA:3.40.50.150 45 160 5.2E-20 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS04340 d99c10d3e2e99c7832ee903bda219458 417 Pfam PF00990 Diguanylate cyclase, GGDEF domain 258 413 2.2E-42 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS04340 d99c10d3e2e99c7832ee903bda219458 417 SUPERFAMILY SSF52172 125 255 9.53E-30 T 11-11-2016 IPR011006 CheY-like superfamily SHALO_RS04340 d99c10d3e2e99c7832ee903bda219458 417 Gene3D G3DSA:3.40.50.2300 122 243 1.2E-31 T 11-11-2016 SHALO_RS04340 d99c10d3e2e99c7832ee903bda219458 417 Gene3D G3DSA:3.40.50.2300 3 105 2.7E-15 T 11-11-2016 SHALO_RS04340 d99c10d3e2e99c7832ee903bda219458 417 SMART SM00267 246 417 5.5E-49 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS04340 d99c10d3e2e99c7832ee903bda219458 417 Pfam PF00072 Response regulator receiver domain 6 105 7.2E-9 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS04340 d99c10d3e2e99c7832ee903bda219458 417 Pfam PF00072 Response regulator receiver domain 128 240 1.2E-21 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS04340 d99c10d3e2e99c7832ee903bda219458 417 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 254 416 1.8E-46 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS04340 d99c10d3e2e99c7832ee903bda219458 417 SMART SM00448 126 240 1.8E-27 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS04340 d99c10d3e2e99c7832ee903bda219458 417 SMART SM00448 4 120 2.4E-4 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS04340 d99c10d3e2e99c7832ee903bda219458 417 Gene3D G3DSA:3.30.70.270 260 416 7.2E-47 T 11-11-2016 SHALO_RS04340 d99c10d3e2e99c7832ee903bda219458 417 SUPERFAMILY SSF55073 262 416 7.85E-43 T 11-11-2016 IPR029787 Nucleotide cyclase SHALO_RS04340 d99c10d3e2e99c7832ee903bda219458 417 SUPERFAMILY SSF52172 3 121 2.42E-17 T 11-11-2016 IPR011006 CheY-like superfamily SHALO_RS02135 7c0c01162d42424b08998179025118e7 700 ProSitePatterns PS00211 ABC transporters family signature. 599 613 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHALO_RS02135 7c0c01162d42424b08998179025118e7 700 Pfam PF00664 ABC transporter transmembrane region 149 416 3.0E-53 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SHALO_RS02135 7c0c01162d42424b08998179025118e7 700 SMART SM00382 487 673 1.2E-18 T 11-11-2016 IPR003593 AAA+ ATPase domain SHALO_RS02135 7c0c01162d42424b08998179025118e7 700 Pfam PF03412 Peptidase C39 family 4 120 6.2E-8 T 11-11-2016 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 SHALO_RS02135 7c0c01162d42424b08998179025118e7 700 SUPERFAMILY SSF90123 134 445 8.76E-69 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SHALO_RS02135 7c0c01162d42424b08998179025118e7 700 Gene3D G3DSA:3.90.70.10 4 121 8.9E-15 T 11-11-2016 SHALO_RS02135 7c0c01162d42424b08998179025118e7 700 TIGRFAM TIGR01846 type_I_sec_HlyB: type I secretion system ATPase 5 697 3.3E-263 T 11-11-2016 IPR010132 ATPase, type I secretion system, HlyB GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 SHALO_RS02135 7c0c01162d42424b08998179025118e7 700 SUPERFAMILY SSF52540 449 697 1.15E-90 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS02135 7c0c01162d42424b08998179025118e7 700 Pfam PF00005 ABC transporter 478 627 2.3E-34 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_RS02135 7c0c01162d42424b08998179025118e7 700 Gene3D G3DSA:1.20.1560.10 134 445 3.1E-79 T 11-11-2016 SHALO_RS02135 7c0c01162d42424b08998179025118e7 700 Gene3D G3DSA:3.40.50.300 461 690 4.6E-81 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS14160 24cc21155c8e0c1855504de3b974e8ca 568 SMART SM00382 349 539 3.6E-13 T 11-11-2016 IPR003593 AAA+ ATPase domain SHALO_RS14160 24cc21155c8e0c1855504de3b974e8ca 568 SMART SM00382 30 256 7.1E-10 T 11-11-2016 IPR003593 AAA+ ATPase domain SHALO_RS14160 24cc21155c8e0c1855504de3b974e8ca 568 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHALO_RS14160 24cc21155c8e0c1855504de3b974e8ca 568 SUPERFAMILY SSF52540 324 545 6.52E-61 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS14160 24cc21155c8e0c1855504de3b974e8ca 568 Gene3D G3DSA:3.40.50.300 6 222 2.9E-60 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS14160 24cc21155c8e0c1855504de3b974e8ca 568 Gene3D G3DSA:3.40.50.300 316 551 1.1E-69 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS14160 24cc21155c8e0c1855504de3b974e8ca 568 Pfam PF00005 ABC transporter 21 161 1.0E-30 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_RS14160 24cc21155c8e0c1855504de3b974e8ca 568 Pfam PF00005 ABC transporter 341 484 3.9E-25 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_RS14160 24cc21155c8e0c1855504de3b974e8ca 568 SUPERFAMILY SSF52540 6 222 1.78E-54 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS10650 21d4695fafd1741ac6f43a78c096fc93 519 SUPERFAMILY SSF51735 288 423 5.58E-29 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS10650 21d4695fafd1741ac6f43a78c096fc93 519 Gene3D G3DSA:1.10.287.70 41 93 3.5E-44 T 11-11-2016 SHALO_RS10650 21d4695fafd1741ac6f43a78c096fc93 519 Gene3D G3DSA:1.10.287.70 125 272 3.5E-44 T 11-11-2016 SHALO_RS10650 21d4695fafd1741ac6f43a78c096fc93 519 Gene3D G3DSA:3.30.70.1450 443 512 2.4E-10 T 11-11-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SHALO_RS10650 21d4695fafd1741ac6f43a78c096fc93 519 PRINTS PR00169 Potassium channel signature 243 269 3.6E-21 T 11-11-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 SHALO_RS10650 21d4695fafd1741ac6f43a78c096fc93 519 PRINTS PR00169 Potassium channel signature 155 181 3.6E-21 T 11-11-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 SHALO_RS10650 21d4695fafd1741ac6f43a78c096fc93 519 PRINTS PR00169 Potassium channel signature 184 207 3.6E-21 T 11-11-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 SHALO_RS10650 21d4695fafd1741ac6f43a78c096fc93 519 PRINTS PR00169 Potassium channel signature 214 236 3.6E-21 T 11-11-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 SHALO_RS10650 21d4695fafd1741ac6f43a78c096fc93 519 PRINTS PR00169 Potassium channel signature 34 62 3.6E-21 T 11-11-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 SHALO_RS10650 21d4695fafd1741ac6f43a78c096fc93 519 PRINTS PR00169 Potassium channel signature 73 96 3.6E-21 T 11-11-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 SHALO_RS10650 21d4695fafd1741ac6f43a78c096fc93 519 Pfam PF00520 Ion transport protein 41 271 1.8E-23 T 11-11-2016 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 SHALO_RS10650 21d4695fafd1741ac6f43a78c096fc93 519 SUPERFAMILY SSF116726 431 512 1.7E-8 T 11-11-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SHALO_RS10650 21d4695fafd1741ac6f43a78c096fc93 519 Gene3D G3DSA:3.40.50.720 285 420 3.7E-31 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS10650 21d4695fafd1741ac6f43a78c096fc93 519 Pfam PF02254 TrkA-N domain 292 407 9.0E-26 T 11-11-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 SHALO_RS10650 21d4695fafd1741ac6f43a78c096fc93 519 SUPERFAMILY SSF81324 37 93 1.96E-39 T 11-11-2016 SHALO_RS10650 21d4695fafd1741ac6f43a78c096fc93 519 SUPERFAMILY SSF81324 125 272 1.96E-39 T 11-11-2016 SHALO_RS05765 3605c6efc13c402746478efc2f69036e 182 ProSitePatterns PS00194 Thioredoxin family active site. 72 90 - T 11-11-2016 IPR017937 Thioredoxin, conserved site GO:0045454 SHALO_RS05765 3605c6efc13c402746478efc2f69036e 182 SUPERFAMILY SSF52833 2 182 1.02E-29 T 11-11-2016 IPR012336 Thioredoxin-like fold SHALO_RS05765 3605c6efc13c402746478efc2f69036e 182 Gene3D G3DSA:3.40.30.10 2 182 1.5E-39 T 11-11-2016 IPR012336 Thioredoxin-like fold SHALO_RS05765 3605c6efc13c402746478efc2f69036e 182 Pfam PF13905 Thioredoxin-like 68 160 1.4E-14 T 11-11-2016 IPR012336 Thioredoxin-like fold SHALO_RS03310 628954119c95b1decc1127e935ac60fb 375 Gene3D G3DSA:3.40.640.10 38 250 6.6E-47 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SHALO_RS03310 628954119c95b1decc1127e935ac60fb 375 Pfam PF00155 Aminotransferase class I and II 27 366 1.6E-32 T 11-11-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SHALO_RS03310 628954119c95b1decc1127e935ac60fb 375 Gene3D G3DSA:3.90.1150.10 251 372 1.3E-17 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SHALO_RS03310 628954119c95b1decc1127e935ac60fb 375 SUPERFAMILY SSF53383 28 372 4.73E-69 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase SHALO_RS09320 98a0b63e854b1cb80cee8054424961f2 787 Pfam PF02754 Cysteine-rich domain 564 643 1.2E-5 T 11-11-2016 IPR004017 Cysteine-rich domain SHALO_RS09320 98a0b63e854b1cb80cee8054424961f2 787 Pfam PF02754 Cysteine-rich domain 443 529 0.0071 T 11-11-2016 IPR004017 Cysteine-rich domain SHALO_RS09320 98a0b63e854b1cb80cee8054424961f2 787 Gene3D G3DSA:1.10.1060.10 287 389 3.8E-13 T 11-11-2016 SHALO_RS09320 98a0b63e854b1cb80cee8054424961f2 787 Gene3D G3DSA:1.10.1060.10 10 107 2.8E-20 T 11-11-2016 SHALO_RS09320 98a0b63e854b1cb80cee8054424961f2 787 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 351 362 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_RS09320 98a0b63e854b1cb80cee8054424961f2 787 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 10 93 3.4E-16 T 11-11-2016 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 SHALO_RS09320 98a0b63e854b1cb80cee8054424961f2 787 SUPERFAMILY SSF51971 64 224 5.83E-19 T 11-11-2016 SHALO_RS09320 98a0b63e854b1cb80cee8054424961f2 787 Pfam PF13450 NAD(P)-binding Rossmann-like domain 113 151 1.6E-9 T 11-11-2016 SHALO_RS09320 98a0b63e854b1cb80cee8054424961f2 787 SUPERFAMILY SSF46548 291 385 6.28E-11 T 11-11-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 SHALO_RS09320 98a0b63e854b1cb80cee8054424961f2 787 Gene3D G3DSA:3.50.50.60 108 206 1.3E-21 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHALO_RS09320 98a0b63e854b1cb80cee8054424961f2 787 Pfam PF13534 4Fe-4S dicluster domain 301 365 9.3E-8 T 11-11-2016 SHALO_RS00170 8e38be115aa1c011401b97a762df60fe 220 SUPERFAMILY SSF158442 29 206 1.57E-26 T 11-11-2016 SHALO_RS00170 8e38be115aa1c011401b97a762df60fe 220 Gene3D G3DSA:1.20.1550.10 17 218 2.8E-56 T 11-11-2016 IPR023380 Disulphide bond formation protein DsbB-like domain SHALO_RS00170 8e38be115aa1c011401b97a762df60fe 220 Pfam PF02600 Disulfide bond formation protein DsbB 26 207 1.2E-38 T 11-11-2016 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 SHALO_RS03125 72901a47d7b8d15ef49185ff1806be1d 329 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 28 314 1.1E-99 T 11-11-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 SHALO_RS03125 72901a47d7b8d15ef49185ff1806be1d 329 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 28 281 2.3E-99 T 11-11-2016 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 SHALO_RS03125 72901a47d7b8d15ef49185ff1806be1d 329 PIRSF PIRSF006470 1 329 8.5E-120 T 11-11-2016 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 SHALO_RS15060 25417d7962f5ef54a1c5e4a9120420a7 388 Pfam PF03916 Polysulphide reductase, NrfD 50 328 5.7E-21 T 11-11-2016 IPR005614 NrfD family SHALO_RS08055 7bfe082d037cddcd726b7fe26a12d046 301 SUPERFAMILY SSF53067 5 117 1.12E-18 T 11-11-2016 SHALO_RS08055 7bfe082d037cddcd726b7fe26a12d046 301 Pfam PF02541 Ppx/GppA phosphatase family 24 294 2.3E-37 T 11-11-2016 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 SHALO_RS08055 7bfe082d037cddcd726b7fe26a12d046 301 Gene3D G3DSA:3.30.420.150 125 295 3.3E-34 T 11-11-2016 SHALO_RS08055 7bfe082d037cddcd726b7fe26a12d046 301 Gene3D G3DSA:3.30.420.40 5 116 1.1E-21 T 11-11-2016 SHALO_RS08055 7bfe082d037cddcd726b7fe26a12d046 301 SUPERFAMILY SSF53067 126 296 8.55E-27 T 11-11-2016 SHALO_RS09235 0a110e06d6d5cbb46407ff42788c7899 630 Gene3D G3DSA:3.40.50.980 4 190 4.8E-31 T 11-11-2016 SHALO_RS09235 0a110e06d6d5cbb46407ff42788c7899 630 SUPERFAMILY SSF56801 357 538 1.23E-104 T 11-11-2016 SHALO_RS09235 0a110e06d6d5cbb46407ff42788c7899 630 SUPERFAMILY SSF56801 5 285 1.23E-104 T 11-11-2016 SHALO_RS09235 0a110e06d6d5cbb46407ff42788c7899 630 SUPERFAMILY SSF56801 570 627 1.23E-104 T 11-11-2016 SHALO_RS09235 0a110e06d6d5cbb46407ff42788c7899 630 Gene3D G3DSA:2.30.38.10 417 491 1.0E-21 T 11-11-2016 SHALO_RS09235 0a110e06d6d5cbb46407ff42788c7899 630 ProSitePatterns PS00455 Putative AMP-binding domain signature. 184 195 - T 11-11-2016 IPR020845 AMP-binding, conserved site SHALO_RS09235 0a110e06d6d5cbb46407ff42788c7899 630 Pfam PF00501 AMP-binding enzyme 16 497 1.3E-94 T 11-11-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 SHALO_RS09235 0a110e06d6d5cbb46407ff42788c7899 630 Gene3D G3DSA:3.40.50.980 354 406 2.9E-33 T 11-11-2016 SHALO_RS09235 0a110e06d6d5cbb46407ff42788c7899 630 Gene3D G3DSA:3.40.50.980 191 280 2.9E-33 T 11-11-2016 SHALO_RS04125 1efef9ca519011fa9a379ac55d41b54f 545 Gene3D G3DSA:3.30.70.270 383 540 1.6E-47 T 11-11-2016 SHALO_RS04125 1efef9ca519011fa9a379ac55d41b54f 545 Pfam PF00990 Diguanylate cyclase, GGDEF domain 381 538 2.0E-45 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS04125 1efef9ca519011fa9a379ac55d41b54f 545 SMART SM00267 370 545 9.8E-48 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS04125 1efef9ca519011fa9a379ac55d41b54f 545 Gene3D G3DSA:3.30.450.20 98 180 5.4E-11 T 11-11-2016 SHALO_RS04125 1efef9ca519011fa9a379ac55d41b54f 545 SUPERFAMILY SSF55073 386 538 2.75E-41 T 11-11-2016 IPR029787 Nucleotide cyclase SHALO_RS04125 1efef9ca519011fa9a379ac55d41b54f 545 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 378 538 1.8E-36 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS04125 1efef9ca519011fa9a379ac55d41b54f 545 Gene3D G3DSA:3.30.450.20 181 293 3.1E-9 T 11-11-2016 SHALO_RS04125 1efef9ca519011fa9a379ac55d41b54f 545 Pfam PF02743 Cache domain 61 284 1.0E-18 T 11-11-2016 IPR033479 Double Cache domain 1 SHALO_RS15080 725a73fd578b1e82a4d086840f6aba52 738 SUPERFAMILY SSF55073 450 651 4.24E-52 T 11-11-2016 IPR029787 Nucleotide cyclase SHALO_RS15080 725a73fd578b1e82a4d086840f6aba52 738 Pfam PF05226 CHASE2 domain 22 354 8.6E-65 T 11-11-2016 IPR007890 CHASE2 SHALO_RS15080 725a73fd578b1e82a4d086840f6aba52 738 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 455 648 4.2E-29 T 11-11-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 SHALO_RS15080 725a73fd578b1e82a4d086840f6aba52 738 SMART SM00044 417 632 9.3E-7 T 11-11-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 SHALO_RS15080 725a73fd578b1e82a4d086840f6aba52 738 SMART SM01080 29 357 2.1E-82 T 11-11-2016 IPR007890 CHASE2 SHALO_RS15080 725a73fd578b1e82a4d086840f6aba52 738 Gene3D G3DSA:3.30.70.1230 454 652 1.9E-43 T 11-11-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 SHALO_RS12865 e814f62ccfb57bd1a78eb8d70b27229b 705 SMART SM00267 516 701 1.2E-55 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS12865 e814f62ccfb57bd1a78eb8d70b27229b 705 Gene3D G3DSA:3.30.70.270 528 703 6.1E-53 T 11-11-2016 SHALO_RS12865 e814f62ccfb57bd1a78eb8d70b27229b 705 Gene3D G3DSA:3.30.450.20 398 516 9.1E-17 T 11-11-2016 SHALO_RS12865 e814f62ccfb57bd1a78eb8d70b27229b 705 Pfam PF08448 PAS fold 407 517 3.0E-13 T 11-11-2016 IPR013656 PAS fold-4 SHALO_RS12865 e814f62ccfb57bd1a78eb8d70b27229b 705 SUPERFAMILY SSF55073 532 702 8.63E-45 T 11-11-2016 IPR029787 Nucleotide cyclase SHALO_RS12865 e814f62ccfb57bd1a78eb8d70b27229b 705 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 398 521 1.0E-8 T 11-11-2016 IPR000014 PAS domain SHALO_RS12865 e814f62ccfb57bd1a78eb8d70b27229b 705 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 524 700 9.8E-44 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS12865 e814f62ccfb57bd1a78eb8d70b27229b 705 Pfam PF00672 HAMP domain 314 379 2.0E-8 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SHALO_RS12865 e814f62ccfb57bd1a78eb8d70b27229b 705 SUPERFAMILY SSF55785 406 518 6.68E-17 T 11-11-2016 IPR000014 PAS domain SHALO_RS12865 e814f62ccfb57bd1a78eb8d70b27229b 705 SMART SM00304 331 383 0.0022 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SHALO_RS12865 e814f62ccfb57bd1a78eb8d70b27229b 705 SMART SM00091 401 467 1.4E-4 T 11-11-2016 IPR000014 PAS domain SHALO_RS12865 e814f62ccfb57bd1a78eb8d70b27229b 705 Pfam PF00990 Diguanylate cyclase, GGDEF domain 527 697 6.3E-43 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS12080 d2385afd72387c70a5d318581aea1c3b 437 Pfam PF02875 Mur ligase family, glutamate ligase domain 283 363 5.3E-22 T 11-11-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 SHALO_RS12080 d2385afd72387c70a5d318581aea1c3b 437 SUPERFAMILY SSF53244 283 433 5.49E-46 T 11-11-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 SHALO_RS12080 d2385afd72387c70a5d318581aea1c3b 437 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 1 430 28.138 T 11-11-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 SHALO_RS12080 d2385afd72387c70a5d318581aea1c3b 437 Gene3D G3DSA:3.40.1190.10 63 286 1.2E-57 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 SHALO_RS12080 d2385afd72387c70a5d318581aea1c3b 437 Gene3D G3DSA:3.90.190.20 287 423 1.3E-53 T 11-11-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 SHALO_RS12080 d2385afd72387c70a5d318581aea1c3b 437 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 67 91 - T 11-11-2016 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 SHALO_RS12080 d2385afd72387c70a5d318581aea1c3b 437 Pfam PF08245 Mur ligase middle domain 69 261 1.1E-41 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 SHALO_RS12080 d2385afd72387c70a5d318581aea1c3b 437 SUPERFAMILY SSF53623 63 281 8.5E-56 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 SHALO_RS12080 d2385afd72387c70a5d318581aea1c3b 437 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 62 430 3.0E-129 T 11-11-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 SHALO_RS06100 388fb194508a141e858080e4eec5baf8 834 Gene3D G3DSA:3.30.450.20 124 215 3.4E-5 T 11-11-2016 SHALO_RS06100 388fb194508a141e858080e4eec5baf8 834 SMART SM00260 682 824 0.0026 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SHALO_RS06100 388fb194508a141e858080e4eec5baf8 834 Pfam PF01584 CheW-like domain 689 823 6.3E-13 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SHALO_RS06100 388fb194508a141e858080e4eec5baf8 834 SUPERFAMILY SSF50341 682 823 1.12E-13 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SHALO_RS00525 dc026a9f5fdca0c46b837d8d45d5d76d 358 Pfam PF04055 Radical SAM superfamily 116 279 7.9E-14 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SHALO_RS00525 dc026a9f5fdca0c46b837d8d45d5d76d 358 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 3 354 69.078 T 11-11-2016 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SHALO_RS00525 dc026a9f5fdca0c46b837d8d45d5d76d 358 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 2 355 1.5E-134 T 11-11-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SHALO_RS00525 dc026a9f5fdca0c46b837d8d45d5d76d 358 SUPERFAMILY SSF102114 110 312 1.05E-10 T 11-11-2016 SHALO_RS00525 dc026a9f5fdca0c46b837d8d45d5d76d 358 PIRSF PIRSF006004 2 358 5.9E-132 T 11-11-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SHALO_RS00525 dc026a9f5fdca0c46b837d8d45d5d76d 358 Gene3D G3DSA:3.80.30.10 167 333 3.7E-8 T 11-11-2016 SHALO_RS11185 3ad23f8898bb018a9dcbdbb6675bfc34 372 TIGRFAM TIGR01472 gmd: GDP-mannose 4,6-dehydratase 4 354 5.0E-182 T 11-11-2016 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|Reactome: R-HSA-6787639 SHALO_RS11185 3ad23f8898bb018a9dcbdbb6675bfc34 372 Pfam PF16363 GDP-mannose 4,6 dehydratase 7 346 2.4E-156 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS11185 3ad23f8898bb018a9dcbdbb6675bfc34 372 SUPERFAMILY SSF51735 4 352 1.39E-80 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS11185 3ad23f8898bb018a9dcbdbb6675bfc34 372 Hamap MF_00955 GDP-mannose 4,6-dehydratase [gmd]. 4 356 55.452 T 11-11-2016 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|Reactome: R-HSA-6787639 SHALO_RS11185 3ad23f8898bb018a9dcbdbb6675bfc34 372 Gene3D G3DSA:3.90.25.10 194 248 5.1E-51 T 11-11-2016 SHALO_RS11185 3ad23f8898bb018a9dcbdbb6675bfc34 372 Gene3D G3DSA:3.90.25.10 304 362 5.1E-51 T 11-11-2016 SHALO_RS11185 3ad23f8898bb018a9dcbdbb6675bfc34 372 Gene3D G3DSA:3.40.50.720 2 191 8.3E-45 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS10085 188d6f0c96acffafb77c85e07e8a7389 732 SUPERFAMILY SSF52540 157 408 7.48E-65 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS10085 188d6f0c96acffafb77c85e07e8a7389 732 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 549 567 1.4E-39 T 11-11-2016 IPR001270 ClpA/B family GO:0005524 SHALO_RS10085 188d6f0c96acffafb77c85e07e8a7389 732 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 520 538 1.4E-39 T 11-11-2016 IPR001270 ClpA/B family GO:0005524 SHALO_RS10085 188d6f0c96acffafb77c85e07e8a7389 732 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 582 596 1.4E-39 T 11-11-2016 IPR001270 ClpA/B family GO:0005524 SHALO_RS10085 188d6f0c96acffafb77c85e07e8a7389 732 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 478 496 1.4E-39 T 11-11-2016 IPR001270 ClpA/B family GO:0005524 SHALO_RS10085 188d6f0c96acffafb77c85e07e8a7389 732 Pfam PF07724 AAA domain (Cdc48 subfamily) 474 631 5.2E-47 T 11-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SHALO_RS10085 188d6f0c96acffafb77c85e07e8a7389 732 Gene3D G3DSA:1.10.8.60 341 420 1.8E-25 T 11-11-2016 SHALO_RS10085 188d6f0c96acffafb77c85e07e8a7389 732 Gene3D G3DSA:1.10.8.60 649 728 1.2E-27 T 11-11-2016 SHALO_RS10085 188d6f0c96acffafb77c85e07e8a7389 732 Gene3D G3DSA:3.40.50.300 157 338 1.1E-45 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS10085 188d6f0c96acffafb77c85e07e8a7389 732 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 637 716 1.7E-21 T 11-11-2016 IPR019489 Clp ATPase, C-terminal SHALO_RS10085 188d6f0c96acffafb77c85e07e8a7389 732 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 718 0.0 T 11-11-2016 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0004176 SHALO_RS10085 188d6f0c96acffafb77c85e07e8a7389 732 Gene3D G3DSA:3.40.50.300 434 648 1.5E-55 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS10085 188d6f0c96acffafb77c85e07e8a7389 732 SUPERFAMILY SSF52540 423 728 1.32E-70 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS10085 188d6f0c96acffafb77c85e07e8a7389 732 SMART SM00382 474 639 2.1E-11 T 11-11-2016 IPR003593 AAA+ ATPase domain SHALO_RS10085 188d6f0c96acffafb77c85e07e8a7389 732 SMART SM00382 195 340 3.3E-12 T 11-11-2016 IPR003593 AAA+ ATPase domain SHALO_RS10085 188d6f0c96acffafb77c85e07e8a7389 732 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 505 523 - T 11-11-2016 IPR028299 ClpA/B, conserved site 2 SHALO_RS10085 188d6f0c96acffafb77c85e07e8a7389 732 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 200 330 5.3E-15 T 11-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SHALO_RS10085 188d6f0c96acffafb77c85e07e8a7389 732 SUPERFAMILY SSF81923 1 137 2.35E-31 T 11-11-2016 IPR004176 Clp, N-terminal GO:0019538 SHALO_RS10085 188d6f0c96acffafb77c85e07e8a7389 732 SMART SM01086 637 726 1.1E-31 T 11-11-2016 IPR019489 Clp ATPase, C-terminal SHALO_RS10085 188d6f0c96acffafb77c85e07e8a7389 732 Gene3D G3DSA:1.10.1780.10 1 138 5.2E-22 T 11-11-2016 IPR004176 Clp, N-terminal GO:0019538 SHALO_RS10085 188d6f0c96acffafb77c85e07e8a7389 732 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 107 130 2.1 T 11-11-2016 IPR004176 Clp, N-terminal GO:0019538 SHALO_RS10085 188d6f0c96acffafb77c85e07e8a7389 732 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 18 60 5.3E-5 T 11-11-2016 IPR004176 Clp, N-terminal GO:0019538 SHALO_RS07325 852f36091cb58ffce9175ad55274f19a 148 SUPERFAMILY SSF89095 4 147 3.87E-34 T 11-11-2016 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 SHALO_RS07325 852f36091cb58ffce9175ad55274f19a 148 Gene3D G3DSA:1.10.10.410 92 147 6.2E-15 T 11-11-2016 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal SHALO_RS07325 852f36091cb58ffce9175ad55274f19a 148 Pfam PF09424 Yqey-like protein 5 147 3.1E-45 T 11-11-2016 IPR019004 Uncharacterised domain YOR215C, mitochondrial SHALO_RS07325 852f36091cb58ffce9175ad55274f19a 148 Gene3D G3DSA:1.10.1510.10 3 91 3.6E-27 T 11-11-2016 SHALO_RS05770 7ebda5860c43c957075eb39b2bce260a 222 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 14 182 1.5E-19 T 11-11-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase SHALO_RS05770 7ebda5860c43c957075eb39b2bce260a 222 Gene3D G3DSA:3.40.50.10420 11 187 1.5E-32 T 11-11-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain SHALO_RS05770 7ebda5860c43c957075eb39b2bce260a 222 SUPERFAMILY SSF100950 11 188 1.02E-34 T 11-11-2016 SHALO_RS05770 7ebda5860c43c957075eb39b2bce260a 222 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 12 182 4.0E-32 T 11-11-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase SHALO_RS03875 d7b12560fa1c87fcc2381d7e6df3e72c 747 SUPERFAMILY SSF54791 584 652 4.24E-14 T 11-11-2016 IPR004088 K Homology domain, type 1 GO:0003723 SHALO_RS03875 d7b12560fa1c87fcc2381d7e6df3e72c 747 SUPERFAMILY SSF50249 675 744 3.36E-15 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold SHALO_RS03875 d7b12560fa1c87fcc2381d7e6df3e72c 747 Gene3D G3DSA:3.30.230.70 2 251 1.4E-69 T 11-11-2016 IPR027408 PNPase/RNase PH domain Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 SHALO_RS03875 d7b12560fa1c87fcc2381d7e6df3e72c 747 Gene3D G3DSA:3.30.230.70 344 571 3.3E-76 T 11-11-2016 IPR027408 PNPase/RNase PH domain Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 SHALO_RS03875 d7b12560fa1c87fcc2381d7e6df3e72c 747 SMART SM00316 677 746 2.4E-15 T 11-11-2016 IPR022967 RNA-binding domain, S1 SHALO_RS03875 d7b12560fa1c87fcc2381d7e6df3e72c 747 Gene3D G3DSA:1.10.10.400 264 343 1.4E-17 T 11-11-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 SHALO_RS03875 d7b12560fa1c87fcc2381d7e6df3e72c 747 PIRSF PIRSF005499 1 746 2.8E-255 T 11-11-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 SHALO_RS03875 d7b12560fa1c87fcc2381d7e6df3e72c 747 SUPERFAMILY SSF55666 141 256 9.35E-18 T 11-11-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 SHALO_RS03875 d7b12560fa1c87fcc2381d7e6df3e72c 747 Pfam PF01138 3' exoribonuclease family, domain 1 352 484 1.2E-18 T 11-11-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 SHALO_RS03875 d7b12560fa1c87fcc2381d7e6df3e72c 747 Pfam PF01138 3' exoribonuclease family, domain 1 19 139 9.9E-16 T 11-11-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 SHALO_RS03875 d7b12560fa1c87fcc2381d7e6df3e72c 747 SUPERFAMILY SSF55666 479 572 8.41E-24 T 11-11-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 SHALO_RS03875 d7b12560fa1c87fcc2381d7e6df3e72c 747 Gene3D G3DSA:3.30.1370.10 581 649 2.0E-17 T 11-11-2016 IPR004088 K Homology domain, type 1 GO:0003723 SHALO_RS03875 d7b12560fa1c87fcc2381d7e6df3e72c 747 Pfam PF00013 KH domain 586 642 4.0E-9 T 11-11-2016 IPR004088 K Homology domain, type 1 GO:0003723 SHALO_RS03875 d7b12560fa1c87fcc2381d7e6df3e72c 747 SMART SM00322 580 646 3.3E-7 T 11-11-2016 IPR004087 K Homology domain GO:0003676 SHALO_RS03875 d7b12560fa1c87fcc2381d7e6df3e72c 747 Gene3D G3DSA:2.40.50.140 674 746 3.0E-18 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold SHALO_RS03875 d7b12560fa1c87fcc2381d7e6df3e72c 747 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 273 349 1.6E-10 T 11-11-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 SHALO_RS03875 d7b12560fa1c87fcc2381d7e6df3e72c 747 SUPERFAMILY SSF54211 2 139 7.09E-41 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SHALO_RS03875 d7b12560fa1c87fcc2381d7e6df3e72c 747 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 1 746 26.361 T 11-11-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 SHALO_RS03875 d7b12560fa1c87fcc2381d7e6df3e72c 747 SUPERFAMILY SSF54211 320 516 2.38E-43 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SHALO_RS03875 d7b12560fa1c87fcc2381d7e6df3e72c 747 Pfam PF03725 3' exoribonuclease family, domain 2 143 196 7.2E-12 T 11-11-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 SHALO_RS03875 d7b12560fa1c87fcc2381d7e6df3e72c 747 Pfam PF03725 3' exoribonuclease family, domain 2 489 558 3.5E-7 T 11-11-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 SHALO_RS03875 d7b12560fa1c87fcc2381d7e6df3e72c 747 Pfam PF00575 S1 RNA binding domain 679 735 3.7E-13 T 11-11-2016 IPR003029 S1 domain GO:0003676 SHALO_RS01915 d34df2f82f666e5f0e7752d5f000d2f8 155 Gene3D G3DSA:3.30.70.560 21 150 9.7E-38 T 11-11-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 SHALO_RS01915 d34df2f82f666e5f0e7752d5f000d2f8 155 SUPERFAMILY SSF55083 21 150 7.85E-39 T 11-11-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 SHALO_RS01915 d34df2f82f666e5f0e7752d5f000d2f8 155 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 23 150 8.3E-37 T 11-11-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 SHALO_RS01915 d34df2f82f666e5f0e7752d5f000d2f8 155 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 24 150 3.8E-25 T 11-11-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 SHALO_RS01915 d34df2f82f666e5f0e7752d5f000d2f8 155 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 107 118 - T 11-11-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 SHALO_RS14345 c2292a438a906201f8e6b46d86938fb8 422 SUPERFAMILY SSF51735 6 106 1.81E-7 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS14345 c2292a438a906201f8e6b46d86938fb8 422 Gene3D G3DSA:3.40.1010.10 174 289 1.9E-30 T 11-11-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 SHALO_RS14345 c2292a438a906201f8e6b46d86938fb8 422 Gene3D G3DSA:3.30.160.110 107 141 9.4E-13 T 11-11-2016 SHALO_RS14345 c2292a438a906201f8e6b46d86938fb8 422 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 7 155 4.3E-27 T 11-11-2016 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 SHALO_RS14345 c2292a438a906201f8e6b46d86938fb8 422 SUPERFAMILY SSF53790 172 406 2.22E-49 T 11-11-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 SHALO_RS14345 c2292a438a906201f8e6b46d86938fb8 422 Gene3D G3DSA:3.30.950.10 297 409 1.3E-17 T 11-11-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 SHALO_RS14345 c2292a438a906201f8e6b46d86938fb8 422 Pfam PF14824 Sirohaem biosynthesis protein central 112 138 2.2E-10 T 11-11-2016 IPR028281 Siroheme synthase, central domain KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 SHALO_RS14345 c2292a438a906201f8e6b46d86938fb8 422 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 175 386 8.1E-28 T 11-11-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 SHALO_RS14345 c2292a438a906201f8e6b46d86938fb8 422 Pfam PF13241 Putative NAD(P)-binding 6 108 1.2E-13 T 11-11-2016 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 SHALO_RS14345 c2292a438a906201f8e6b46d86938fb8 422 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 254 287 - T 11-11-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 SHALO_RS14345 c2292a438a906201f8e6b46d86938fb8 422 Gene3D G3DSA:3.40.50.720 4 106 9.3E-13 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS14345 c2292a438a906201f8e6b46d86938fb8 422 SUPERFAMILY SSF75615 101 157 5.75E-15 T 11-11-2016 SHALO_RS14345 c2292a438a906201f8e6b46d86938fb8 422 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 174 407 1.0E-56 T 11-11-2016 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 SHALO_RS07040 ef787ad1b0f321fab84fcdca2f5b46c9 290 SUPERFAMILY SSF56770 1 241 1.57E-55 T 11-11-2016 SHALO_RS07040 ef787ad1b0f321fab84fcdca2f5b46c9 290 PIRSF PIRSF000310 1 290 1.4E-59 T 11-11-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SHALO_RS07040 ef787ad1b0f321fab84fcdca2f5b46c9 290 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 9 151 2.3E-21 T 11-11-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS07040 ef787ad1b0f321fab84fcdca2f5b46c9 290 Pfam PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal 169 242 2.1E-23 T 11-11-2016 IPR027394 Cytochrome-c3 hydrogenase, C-terminal SHALO_RS07040 ef787ad1b0f321fab84fcdca2f5b46c9 290 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 195 221 5.1E-11 T 11-11-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SHALO_RS07040 ef787ad1b0f321fab84fcdca2f5b46c9 290 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 222 235 5.1E-11 T 11-11-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SHALO_RS07040 ef787ad1b0f321fab84fcdca2f5b46c9 290 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 80 94 5.1E-11 T 11-11-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SHALO_RS07040 ef787ad1b0f321fab84fcdca2f5b46c9 290 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 131 154 5.1E-11 T 11-11-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SHALO_RS07040 ef787ad1b0f321fab84fcdca2f5b46c9 290 Gene3D G3DSA:4.10.480.10 170 242 2.9E-25 T 11-11-2016 IPR027394 Cytochrome-c3 hydrogenase, C-terminal SHALO_RS07040 ef787ad1b0f321fab84fcdca2f5b46c9 290 Gene3D G3DSA:3.40.50.700 1 167 9.9E-26 T 11-11-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS12250 78f147a0ac3bbafeae0a768632e7a0cc 182 Gene3D G3DSA:3.30.420.10 2 134 2.1E-31 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SHALO_RS12250 78f147a0ac3bbafeae0a768632e7a0cc 182 SUPERFAMILY SSF53098 2 173 1.82E-53 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SHALO_RS12250 78f147a0ac3bbafeae0a768632e7a0cc 182 Pfam PF01351 Ribonuclease HII 3 173 1.6E-29 T 11-11-2016 IPR024567 Ribonuclease HII/HIII domain SHALO_RS13950 bc6d98e25342fb75f03437cd81b17e34 511 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 418 509 3.2E-23 T 11-11-2016 IPR025158 Mg chelatase-related protein, C-terminal domain SHALO_RS13950 bc6d98e25342fb75f03437cd81b17e34 511 SUPERFAMILY SSF54211 17 173 1.18E-21 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SHALO_RS13950 bc6d98e25342fb75f03437cd81b17e34 511 Pfam PF01078 Magnesium chelatase, subunit ChlI 210 413 1.7E-78 T 11-11-2016 IPR000523 Magnesium chelatase ChlI domain SHALO_RS13950 bc6d98e25342fb75f03437cd81b17e34 511 Gene3D G3DSA:3.30.230.10 20 170 4.3E-21 T 11-11-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SHALO_RS13950 bc6d98e25342fb75f03437cd81b17e34 511 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 17 509 3.9E-136 T 11-11-2016 IPR004482 Mg chelatase-related protein SHALO_RS13950 bc6d98e25342fb75f03437cd81b17e34 511 SUPERFAMILY SSF52540 208 509 1.8E-34 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS13950 bc6d98e25342fb75f03437cd81b17e34 511 Gene3D G3DSA:3.40.50.300 209 405 5.0E-40 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS13950 bc6d98e25342fb75f03437cd81b17e34 511 Pfam PF13541 Subunit ChlI of Mg-chelatase 28 146 2.5E-34 T 11-11-2016 SHALO_RS05560 198a8cfb51c22d95bebda9567d99f4e4 280 SUPERFAMILY SSF51735 120 276 4.57E-51 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS05560 198a8cfb51c22d95bebda9567d99f4e4 280 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 3 118 1.0E-38 T 11-11-2016 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 SHALO_RS05560 198a8cfb51c22d95bebda9567d99f4e4 280 Gene3D G3DSA:3.40.192.10 5 137 3.0E-49 T 11-11-2016 SHALO_RS05560 198a8cfb51c22d95bebda9567d99f4e4 280 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 107 128 1.2E-82 T 11-11-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 SHALO_RS05560 198a8cfb51c22d95bebda9567d99f4e4 280 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 201 230 1.2E-82 T 11-11-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 SHALO_RS05560 198a8cfb51c22d95bebda9567d99f4e4 280 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 152 172 1.2E-82 T 11-11-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 SHALO_RS05560 198a8cfb51c22d95bebda9567d99f4e4 280 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 72 99 1.2E-82 T 11-11-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 SHALO_RS05560 198a8cfb51c22d95bebda9567d99f4e4 280 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 236 252 1.2E-82 T 11-11-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 SHALO_RS05560 198a8cfb51c22d95bebda9567d99f4e4 280 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 253 271 1.2E-82 T 11-11-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 SHALO_RS05560 198a8cfb51c22d95bebda9567d99f4e4 280 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 31 53 1.2E-82 T 11-11-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 SHALO_RS05560 198a8cfb51c22d95bebda9567d99f4e4 280 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 121 278 1.6E-69 T 11-11-2016 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 SHALO_RS05560 198a8cfb51c22d95bebda9567d99f4e4 280 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 73 98 - T 11-11-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 SHALO_RS05560 198a8cfb51c22d95bebda9567d99f4e4 280 Gene3D G3DSA:3.40.50.720 138 261 2.1E-52 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS05560 198a8cfb51c22d95bebda9567d99f4e4 280 SUPERFAMILY SSF53223 1 119 1.92E-37 T 11-11-2016 SHALO_RS05560 198a8cfb51c22d95bebda9567d99f4e4 280 Hamap MF_01576 Bifunctional protein FolD [folD]. 1 280 38.242 T 11-11-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 SHALO_RS05560 198a8cfb51c22d95bebda9567d99f4e4 280 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 257 265 - T 11-11-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 SHALO_RS04870 841dcddcceef6e23fe0c00c7257c21e0 230 SMART SM00862 157 227 8.7E-18 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS04870 841dcddcceef6e23fe0c00c7257c21e0 230 Gene3D G3DSA:3.40.50.2300 10 158 1.7E-32 T 11-11-2016 SHALO_RS04870 841dcddcceef6e23fe0c00c7257c21e0 230 SMART SM00448 12 123 3.7E-25 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS04870 841dcddcceef6e23fe0c00c7257c21e0 230 Gene3D G3DSA:1.10.10.10 159 228 4.2E-19 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS04870 841dcddcceef6e23fe0c00c7257c21e0 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 158 227 1.7E-15 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS04870 841dcddcceef6e23fe0c00c7257c21e0 230 SUPERFAMILY SSF52172 11 181 1.71E-34 T 11-11-2016 IPR011006 CheY-like superfamily SHALO_RS04870 841dcddcceef6e23fe0c00c7257c21e0 230 Pfam PF00072 Response regulator receiver domain 14 123 1.1E-25 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS00080 cdbc2123b2f1ed8de7d0e958213246c1 216 SUPERFAMILY SSF48008 81 212 1.49E-27 T 11-11-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal SHALO_RS00080 cdbc2123b2f1ed8de7d0e958213246c1 216 Gene3D G3DSA:1.10.10.10 2 75 7.1E-18 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS00080 cdbc2123b2f1ed8de7d0e958213246c1 216 SMART SM00895 84 206 1.4E-19 T 11-11-2016 IPR011711 GntR, C-terminal SHALO_RS00080 cdbc2123b2f1ed8de7d0e958213246c1 216 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 71 6.1E-12 T 11-11-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SHALO_RS00080 cdbc2123b2f1ed8de7d0e958213246c1 216 Gene3D G3DSA:1.20.120.530 77 213 6.9E-31 T 11-11-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal SHALO_RS00080 cdbc2123b2f1ed8de7d0e958213246c1 216 SUPERFAMILY SSF46785 10 100 7.39E-15 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS00080 cdbc2123b2f1ed8de7d0e958213246c1 216 SMART SM00345 16 74 6.7E-6 T 11-11-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SHALO_RS00080 cdbc2123b2f1ed8de7d0e958213246c1 216 Pfam PF07729 FCD domain 84 205 3.2E-25 T 11-11-2016 IPR011711 GntR, C-terminal SHALO_RS08110 1593a1ce3c38930930d876465ea8b255 118 ProDom PD006096 DELTA SUBUNIT NITROGENASE DINITROGENASE OXIDOREDUCTASE VANADIUM FIXATION METAL-BINDING IRON CHAIN 10 113 4.0E-33 T 11-11-2016 IPR004349 Vanadium/alternative nitrogenase delta subunit GO:0009399|GO:0016163|GO:0055114 KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 SHALO_RS08110 1593a1ce3c38930930d876465ea8b255 118 TIGRFAM TIGR02929 anfG_nitrog: Fe-only nitrogenase, delta subunit 10 118 3.3E-52 T 11-11-2016 IPR014278 Nitrogenase iron-iron, delta subunit GO:0005506|GO:0009399|GO:0016163|GO:0051536|GO:0055114 KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 SHALO_RS08110 1593a1ce3c38930930d876465ea8b255 118 Pfam PF03139 Vanadium/alternative nitrogenase delta subunit 9 118 2.3E-51 T 11-11-2016 IPR004349 Vanadium/alternative nitrogenase delta subunit GO:0009399|GO:0016163|GO:0055114 KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 SHALO_RS07315 5a4dc723982e70899c61f13abbf3f528 702 Gene3D G3DSA:3.40.50.10750 508 667 9.7E-68 T 11-11-2016 SHALO_RS07315 5a4dc723982e70899c61f13abbf3f528 702 Gene3D G3DSA:3.40.50.300 19 210 7.2E-7 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS07315 5a4dc723982e70899c61f13abbf3f528 702 Gene3D G3DSA:3.40.1390.20 211 348 1.9E-28 T 11-11-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like SHALO_RS07315 5a4dc723982e70899c61f13abbf3f528 702 PIRSF PIRSF006107 2 699 1.4E-186 T 11-11-2016 IPR016475 Phosphate acetyltransferase, bacteria GO:0008959 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 SHALO_RS07315 5a4dc723982e70899c61f13abbf3f528 702 Pfam PF07085 DRTGG domain 214 328 1.3E-24 T 11-11-2016 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 SHALO_RS07315 5a4dc723982e70899c61f13abbf3f528 702 SUPERFAMILY SSF53659 374 694 3.33E-97 T 11-11-2016 SHALO_RS07315 5a4dc723982e70899c61f13abbf3f528 702 SUPERFAMILY SSF52540 1 212 3.24E-11 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS07315 5a4dc723982e70899c61f13abbf3f528 702 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 390 691 1.8E-127 T 11-11-2016 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 SHALO_RS07315 5a4dc723982e70899c61f13abbf3f528 702 SUPERFAMILY SSF75138 210 328 1.53E-22 T 11-11-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like SHALO_RS07315 5a4dc723982e70899c61f13abbf3f528 702 Pfam PF01515 Phosphate acetyl/butaryl transferase 374 691 2.0E-132 T 11-11-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 SHALO_RS07315 5a4dc723982e70899c61f13abbf3f528 702 Pfam PF13500 AAA domain 4 207 7.5E-19 T 11-11-2016 SHALO_RS10910 1e39f11658da9088627be22b86d23307 280 SUPERFAMILY SSF82689 174 271 1.83E-24 T 11-11-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 SHALO_RS10910 1e39f11658da9088627be22b86d23307 280 Pfam PF05552 Conserved TM helix 17 59 3.9E-8 T 11-11-2016 IPR008910 Conserved TM helix SHALO_RS10910 1e39f11658da9088627be22b86d23307 280 SUPERFAMILY SSF82861 23 107 1.96E-14 T 11-11-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 SHALO_RS10910 1e39f11658da9088627be22b86d23307 280 Pfam PF00924 Mechanosensitive ion channel 67 261 5.4E-40 T 11-11-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 SHALO_RS10910 1e39f11658da9088627be22b86d23307 280 SUPERFAMILY SSF50182 109 172 2.26E-16 T 11-11-2016 IPR010920 LSM domain SHALO_RS10910 1e39f11658da9088627be22b86d23307 280 Gene3D G3DSA:2.30.30.60 124 172 7.3E-16 T 11-11-2016 SHALO_RS10910 1e39f11658da9088627be22b86d23307 280 Gene3D G3DSA:3.30.70.100 177 259 2.3E-17 T 11-11-2016 SHALO_RS08835 326bbaf64f16e353372fd37cfb852c4d 159 Pfam PF03737 Demethylmenaquinone methyltransferase 5 152 1.8E-35 T 11-11-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein SHALO_RS08835 326bbaf64f16e353372fd37cfb852c4d 159 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 153 2.4E-44 T 11-11-2016 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 SHALO_RS08835 326bbaf64f16e353372fd37cfb852c4d 159 Gene3D G3DSA:3.50.30.40 1 156 1.3E-42 T 11-11-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein SHALO_RS08835 326bbaf64f16e353372fd37cfb852c4d 159 SUPERFAMILY SSF89562 1 157 3.14E-37 T 11-11-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein SHALO_RS03430 366c2ef4cb53d5017348662eb7d42e87 501 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 147 362 3.0E-77 T 11-11-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SHALO_RS03430 366c2ef4cb53d5017348662eb7d42e87 501 SUPERFAMILY SSF52540 94 368 2.92E-100 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS03430 366c2ef4cb53d5017348662eb7d42e87 501 Gene3D G3DSA:2.40.30.20 2 89 9.2E-36 T 11-11-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210 SHALO_RS03430 366c2ef4cb53d5017348662eb7d42e87 501 Gene3D G3DSA:3.40.50.300 93 369 5.3E-120 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS03430 366c2ef4cb53d5017348662eb7d42e87 501 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 369 494 1.9E-47 T 11-11-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SHALO_RS03430 366c2ef4cb53d5017348662eb7d42e87 501 PIRSF PIRSF039088 1 501 4.8E-261 T 11-11-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210 SHALO_RS03430 366c2ef4cb53d5017348662eb7d42e87 501 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 499 52.001 T 11-11-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210 SHALO_RS03430 366c2ef4cb53d5017348662eb7d42e87 501 Gene3D G3DSA:1.20.150.20 370 498 4.5E-52 T 11-11-2016 SHALO_RS03430 366c2ef4cb53d5017348662eb7d42e87 501 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 2 499 8.8E-261 T 11-11-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210 SHALO_RS03430 366c2ef4cb53d5017348662eb7d42e87 501 SUPERFAMILY SSF50615 8 90 3.4E-28 T 11-11-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SHALO_RS03430 366c2ef4cb53d5017348662eb7d42e87 501 SUPERFAMILY SSF47917 370 498 1.67E-46 T 11-11-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SHALO_RS03430 366c2ef4cb53d5017348662eb7d42e87 501 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 353 362 - T 11-11-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SHALO_RS03430 366c2ef4cb53d5017348662eb7d42e87 501 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 24 89 5.0E-16 T 11-11-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SHALO_RS12910 d27416f30d3b623e5a1c91f865ea7f12 509 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 143 265 1.0E-24 T 11-11-2016 IPR000014 PAS domain SHALO_RS12910 d27416f30d3b623e5a1c91f865ea7f12 509 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 4 111 7.5E-16 T 11-11-2016 IPR000014 PAS domain SHALO_RS12910 d27416f30d3b623e5a1c91f865ea7f12 509 SMART SM00091 147 213 2.2E-11 T 11-11-2016 IPR000014 PAS domain SHALO_RS12910 d27416f30d3b623e5a1c91f865ea7f12 509 SMART SM00091 4 72 5.0E-9 T 11-11-2016 IPR000014 PAS domain SHALO_RS12910 d27416f30d3b623e5a1c91f865ea7f12 509 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 396 507 1.0E-15 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS12910 d27416f30d3b623e5a1c91f865ea7f12 509 PRINTS PR00344 Bacterial sensor protein C-terminal signature 452 462 5.1E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS12910 d27416f30d3b623e5a1c91f865ea7f12 509 PRINTS PR00344 Bacterial sensor protein C-terminal signature 465 483 5.1E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS12910 d27416f30d3b623e5a1c91f865ea7f12 509 PRINTS PR00344 Bacterial sensor protein C-terminal signature 434 448 5.1E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS12910 d27416f30d3b623e5a1c91f865ea7f12 509 PRINTS PR00344 Bacterial sensor protein C-terminal signature 494 507 5.1E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS12910 d27416f30d3b623e5a1c91f865ea7f12 509 SUPERFAMILY SSF47384 273 352 1.96E-9 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS12910 d27416f30d3b623e5a1c91f865ea7f12 509 SMART SM00387 393 509 1.4E-19 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS12910 d27416f30d3b623e5a1c91f865ea7f12 509 SUPERFAMILY SSF55785 138 259 7.41E-22 T 11-11-2016 IPR000014 PAS domain SHALO_RS12910 d27416f30d3b623e5a1c91f865ea7f12 509 Gene3D G3DSA:1.10.287.130 279 347 1.9E-4 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS12910 d27416f30d3b623e5a1c91f865ea7f12 509 SUPERFAMILY SSF55785 6 113 1.03E-19 T 11-11-2016 IPR000014 PAS domain SHALO_RS12910 d27416f30d3b623e5a1c91f865ea7f12 509 SUPERFAMILY SSF55874 343 508 9.82E-32 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS12910 d27416f30d3b623e5a1c91f865ea7f12 509 Gene3D G3DSA:3.30.450.20 142 259 2.6E-21 T 11-11-2016 SHALO_RS12910 d27416f30d3b623e5a1c91f865ea7f12 509 Gene3D G3DSA:3.30.565.10 354 508 2.6E-31 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS12910 d27416f30d3b623e5a1c91f865ea7f12 509 SMART SM00388 283 353 0.0099 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS12910 d27416f30d3b623e5a1c91f865ea7f12 509 Gene3D G3DSA:3.30.450.20 4 116 1.5E-20 T 11-11-2016 SHALO_RS12910 d27416f30d3b623e5a1c91f865ea7f12 509 Pfam PF13426 PAS domain 159 260 1.1E-9 T 11-11-2016 IPR000014 PAS domain SHALO_RS12910 d27416f30d3b623e5a1c91f865ea7f12 509 Pfam PF08448 PAS fold 11 116 3.8E-10 T 11-11-2016 IPR013656 PAS fold-4 SHALO_RS11985 0dea25e6ec96e1988e5e8947030bdee4 488 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 215 270 - T 11-11-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_RS11985 0dea25e6ec96e1988e5e8947030bdee4 488 SUPERFAMILY SSF81442 9 485 4.84E-114 T 11-11-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_RS11985 0dea25e6ec96e1988e5e8947030bdee4 488 Gene3D G3DSA:1.20.210.10 12 485 9.5E-72 T 11-11-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_RS11985 0dea25e6ec96e1988e5e8947030bdee4 488 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 13 454 8.8E-110 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_RS11985 0dea25e6ec96e1988e5e8947030bdee4 488 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 8 485 7.4E-217 T 11-11-2016 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 SHALO_RS05255 ab8c55f3a1b7e770a18f01042eed38e6 203 SMART SM00421 146 203 8.5E-18 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SHALO_RS05255 ab8c55f3a1b7e770a18f01042eed38e6 203 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 202 9.9E-15 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SHALO_RS05255 ab8c55f3a1b7e770a18f01042eed38e6 203 SUPERFAMILY SSF46894 133 202 2.72E-17 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SHALO_RS05255 ab8c55f3a1b7e770a18f01042eed38e6 203 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 8.2E-11 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SHALO_RS05255 ab8c55f3a1b7e770a18f01042eed38e6 203 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 8.2E-11 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SHALO_RS05255 ab8c55f3a1b7e770a18f01042eed38e6 203 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 8.2E-11 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SHALO_RS05255 ab8c55f3a1b7e770a18f01042eed38e6 203 Gene3D G3DSA:1.10.10.10 108 202 7.3E-20 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS14535 3f7a55e2af47a5bb5767089b62290cf3 467 Gene3D G3DSA:1.10.1160.10 232 314 6.5E-33 T 11-11-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 SHALO_RS14535 3f7a55e2af47a5bb5767089b62290cf3 467 SUPERFAMILY SSF52374 2 296 2.36E-105 T 11-11-2016 SHALO_RS14535 3f7a55e2af47a5bb5767089b62290cf3 467 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 2 456 1.6E-165 T 11-11-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 SHALO_RS14535 3f7a55e2af47a5bb5767089b62290cf3 467 SUPERFAMILY SSF48163 299 457 1.31E-30 T 11-11-2016 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 SHALO_RS14535 3f7a55e2af47a5bb5767089b62290cf3 467 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 8 19 - T 11-11-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 SHALO_RS14535 3f7a55e2af47a5bb5767089b62290cf3 467 PRINTS PR00987 Glutamyl-tRNA synthetase signature 5 17 1.8E-23 T 11-11-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 SHALO_RS14535 3f7a55e2af47a5bb5767089b62290cf3 467 PRINTS PR00987 Glutamyl-tRNA synthetase signature 19 30 1.8E-23 T 11-11-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 SHALO_RS14535 3f7a55e2af47a5bb5767089b62290cf3 467 PRINTS PR00987 Glutamyl-tRNA synthetase signature 195 203 1.8E-23 T 11-11-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 SHALO_RS14535 3f7a55e2af47a5bb5767089b62290cf3 467 PRINTS PR00987 Glutamyl-tRNA synthetase signature 34 47 1.8E-23 T 11-11-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 SHALO_RS14535 3f7a55e2af47a5bb5767089b62290cf3 467 PRINTS PR00987 Glutamyl-tRNA synthetase signature 179 189 1.8E-23 T 11-11-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 SHALO_RS14535 3f7a55e2af47a5bb5767089b62290cf3 467 Gene3D G3DSA:3.40.50.620 2 67 4.9E-48 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHALO_RS14535 3f7a55e2af47a5bb5767089b62290cf3 467 Gene3D G3DSA:3.40.50.620 181 230 4.9E-48 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHALO_RS14535 3f7a55e2af47a5bb5767089b62290cf3 467 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 2 305 1.0E-100 T 11-11-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 SHALO_RS14535 3f7a55e2af47a5bb5767089b62290cf3 467 Hamap MF_00022_B Glutamate--tRNA ligase [gltX]. 2 458 31.104 T 11-11-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 SHALO_RS14535 3f7a55e2af47a5bb5767089b62290cf3 467 Gene3D G3DSA:3.90.800.10 68 180 4.7E-31 T 11-11-2016 SHALO_RS14535 3f7a55e2af47a5bb5767089b62290cf3 467 Gene3D G3DSA:1.10.10.350 361 456 1.5E-21 T 11-11-2016 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 SHALO_RS00620 3e4fe40139e6535404aa3a104a01b529 446 SUPERFAMILY SSF53738 260 367 8.63E-26 T 11-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHALO_RS00620 3e4fe40139e6535404aa3a104a01b529 446 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 2 133 1.0E-41 T 11-11-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHALO_RS00620 3e4fe40139e6535404aa3a104a01b529 446 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 4 437 2.1E-156 T 11-11-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHALO_RS00620 3e4fe40139e6535404aa3a104a01b529 446 Gene3D G3DSA:3.40.120.10 177 251 1.1E-24 T 11-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHALO_RS00620 3e4fe40139e6535404aa3a104a01b529 446 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 260 366 2.5E-28 T 11-11-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHALO_RS00620 3e4fe40139e6535404aa3a104a01b529 446 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 1 443 40.483 T 11-11-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHALO_RS00620 3e4fe40139e6535404aa3a104a01b529 446 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 93 102 - T 11-11-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHALO_RS00620 3e4fe40139e6535404aa3a104a01b529 446 Gene3D G3DSA:3.40.120.10 2 137 2.0E-42 T 11-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHALO_RS00620 3e4fe40139e6535404aa3a104a01b529 446 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 158 255 4.3E-22 T 11-11-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHALO_RS00620 3e4fe40139e6535404aa3a104a01b529 446 SUPERFAMILY SSF53738 2 181 6.77E-44 T 11-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHALO_RS00620 3e4fe40139e6535404aa3a104a01b529 446 Gene3D G3DSA:3.30.310.50 364 439 1.9E-8 T 11-11-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHALO_RS00620 3e4fe40139e6535404aa3a104a01b529 446 Gene3D G3DSA:3.40.120.10 252 363 3.0E-31 T 11-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHALO_RS00620 3e4fe40139e6535404aa3a104a01b529 446 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 404 435 4.8E-6 T 11-11-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHALO_RS00620 3e4fe40139e6535404aa3a104a01b529 446 SUPERFAMILY SSF55957 359 445 1.96E-14 T 11-11-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHALO_RS00620 3e4fe40139e6535404aa3a104a01b529 446 SUPERFAMILY SSF53738 157 257 1.96E-28 T 11-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHALO_RS00620 3e4fe40139e6535404aa3a104a01b529 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 92 106 1.7E-13 T 11-11-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHALO_RS00620 3e4fe40139e6535404aa3a104a01b529 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 235 250 1.7E-13 T 11-11-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHALO_RS00620 3e4fe40139e6535404aa3a104a01b529 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 175 194 1.7E-13 T 11-11-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHALO_RS01390 23fe601228010d552f072fd55b155045 330 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 238 326 5.6E-35 T 11-11-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 SHALO_RS01390 23fe601228010d552f072fd55b155045 330 Gene3D G3DSA:3.40.47.10 162 326 3.8E-51 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SHALO_RS01390 23fe601228010d552f072fd55b155045 330 Gene3D G3DSA:3.40.47.10 5 161 1.1E-62 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SHALO_RS01390 23fe601228010d552f072fd55b155045 330 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 2 327 7.6E-139 T 11-11-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 SHALO_RS01390 23fe601228010d552f072fd55b155045 330 SUPERFAMILY SSF53901 7 327 6.89E-64 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SHALO_RS01390 23fe601228010d552f072fd55b155045 330 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 107 186 1.5E-30 T 11-11-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 SHALO_RS01390 23fe601228010d552f072fd55b155045 330 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 1 327 69.557 T 11-11-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 SHALO_RS02055 72bbd27ea3526adabcb6c29dd41b732a 691 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 32 659 1.2E-193 T 11-11-2016 IPR011853 TRAP transporter, 4TM/12TM fusion protein SHALO_RS02055 72bbd27ea3526adabcb6c29dd41b732a 691 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 129 583 4.8E-86 T 11-11-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit SHALO_RS12180 a350376e07e25bbb8e65c3380a51dab0 122 Gene3D G3DSA:2.40.150.20 1 122 2.1E-54 T 11-11-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 SHALO_RS12180 a350376e07e25bbb8e65c3380a51dab0 122 SMART SM01374 1 122 3.4E-84 T 11-11-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 SHALO_RS12180 a350376e07e25bbb8e65c3380a51dab0 122 SUPERFAMILY SSF50193 1 122 3.4E-52 T 11-11-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 SHALO_RS12180 a350376e07e25bbb8e65c3380a51dab0 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 2.0E-57 T 11-11-2016 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 SHALO_RS12180 a350376e07e25bbb8e65c3380a51dab0 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 2.6E-55 T 11-11-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 SHALO_RS12180 a350376e07e25bbb8e65c3380a51dab0 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 27.235 T 11-11-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 SHALO_RS12180 a350376e07e25bbb8e65c3380a51dab0 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 11-11-2016 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_RS01990 2c6b59af47d8d9bc1eb49229c982695b 309 Gene3D G3DSA:3.40.50.2020 1 159 8.2E-74 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like SHALO_RS01990 2c6b59af47d8d9bc1eb49229c982695b 309 SUPERFAMILY SSF53271 69 301 5.58E-67 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like SHALO_RS01990 2c6b59af47d8d9bc1eb49229c982695b 309 Pfam PF14572 Phosphoribosyl synthetase-associated domain 198 308 3.7E-28 T 11-11-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 SHALO_RS01990 2c6b59af47d8d9bc1eb49229c982695b 309 Hamap MF_00583_B Ribose-phosphate pyrophosphokinase [prs]. 4 309 48.65 T 11-11-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 SHALO_RS01990 2c6b59af47d8d9bc1eb49229c982695b 309 Gene3D G3DSA:3.40.50.2020 160 283 7.5E-53 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like SHALO_RS01990 2c6b59af47d8d9bc1eb49229c982695b 309 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 5 120 2.2E-49 T 11-11-2016 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 SHALO_RS01990 2c6b59af47d8d9bc1eb49229c982695b 309 SMART SM01400 4 120 2.8E-78 T 11-11-2016 SHALO_RS01990 2c6b59af47d8d9bc1eb49229c982695b 309 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 4 308 1.5E-126 T 11-11-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 SHALO_RS01990 2c6b59af47d8d9bc1eb49229c982695b 309 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 128 143 - T 11-11-2016 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 SHALO_RS14390 790f4e77a31e5e9b1ca8e427d622d0af 477 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 315 476 1.5E-45 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS14390 790f4e77a31e5e9b1ca8e427d622d0af 477 SMART SM00267 307 477 1.7E-52 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS14390 790f4e77a31e5e9b1ca8e427d622d0af 477 SUPERFAMILY SSF55073 322 476 4.0E-41 T 11-11-2016 IPR029787 Nucleotide cyclase SHALO_RS14390 790f4e77a31e5e9b1ca8e427d622d0af 477 Gene3D G3DSA:3.30.70.270 319 476 6.1E-47 T 11-11-2016 SHALO_RS14390 790f4e77a31e5e9b1ca8e427d622d0af 477 Gene3D G3DSA:3.30.450.20 155 283 4.0E-5 T 11-11-2016 SHALO_RS14390 790f4e77a31e5e9b1ca8e427d622d0af 477 Pfam PF00990 Diguanylate cyclase, GGDEF domain 317 472 3.2E-42 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS08530 e66a38da7bca7ac09ec47373cf756500 213 SUPERFAMILY SSF48150 8 208 2.2E-59 T 11-11-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 SHALO_RS08530 e66a38da7bca7ac09ec47373cf756500 213 SMART SM00478 41 187 1.0E-42 T 11-11-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 SHALO_RS08530 e66a38da7bca7ac09ec47373cf756500 213 Hamap MF_00942 Endonuclease III [nth]. 1 211 31.982 T 11-11-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 SHALO_RS08530 e66a38da7bca7ac09ec47373cf756500 213 PIRSF PIRSF001435 1 212 8.3E-41 T 11-11-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 SHALO_RS08530 e66a38da7bca7ac09ec47373cf756500 213 Gene3D G3DSA:1.10.1670.10 124 209 4.0E-27 T 11-11-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 SHALO_RS08530 e66a38da7bca7ac09ec47373cf756500 213 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 37 170 4.9E-22 T 11-11-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 SHALO_RS08530 e66a38da7bca7ac09ec47373cf756500 213 TIGRFAM TIGR01083 nth: endonuclease III 7 196 4.0E-65 T 11-11-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 SHALO_RS08530 e66a38da7bca7ac09ec47373cf756500 213 Gene3D G3DSA:1.10.340.30 25 123 7.2E-31 T 11-11-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 SHALO_RS14635 d6da89e381350e92b38ad0f0b5ce14a1 596 PIRSF PIRSF001589 1 595 2.6E-150 T 11-11-2016 SHALO_RS14635 d6da89e381350e92b38ad0f0b5ce14a1 596 SUPERFAMILY SSF52402 220 372 3.72E-71 T 11-11-2016 SHALO_RS14635 d6da89e381350e92b38ad0f0b5ce14a1 596 SUPERFAMILY SSF52402 451 582 3.72E-71 T 11-11-2016 SHALO_RS14635 d6da89e381350e92b38ad0f0b5ce14a1 596 Pfam PF00733 Asparagine synthase 229 591 1.6E-85 T 11-11-2016 IPR001962 Asparagine synthase GO:0004066|GO:0006529 SHALO_RS14635 d6da89e381350e92b38ad0f0b5ce14a1 596 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 530 2.2E-138 T 11-11-2016 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 SHALO_RS14635 d6da89e381350e92b38ad0f0b5ce14a1 596 Pfam PF13537 Glutamine amidotransferase domain 43 156 3.8E-40 T 11-11-2016 IPR017932 Glutamine amidotransferase type 2 domain SHALO_RS14635 d6da89e381350e92b38ad0f0b5ce14a1 596 SUPERFAMILY SSF56235 1 213 2.7E-58 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SHALO_RS14635 d6da89e381350e92b38ad0f0b5ce14a1 596 Gene3D G3DSA:3.60.20.10 1 211 1.8E-65 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SHALO_RS14635 d6da89e381350e92b38ad0f0b5ce14a1 596 Gene3D G3DSA:3.40.50.620 212 368 6.1E-81 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHALO_RS14635 d6da89e381350e92b38ad0f0b5ce14a1 596 Gene3D G3DSA:3.40.50.620 446 591 6.1E-81 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHALO_RS07025 cb3d97ebc8d070d458de849bb2a96b05 421 Gene3D G3DSA:3.40.50.10490 170 394 2.5E-65 T 11-11-2016 SHALO_RS07025 cb3d97ebc8d070d458de849bb2a96b05 421 Gene3D G3DSA:3.40.50.10490 53 169 2.0E-27 T 11-11-2016 SHALO_RS07025 cb3d97ebc8d070d458de849bb2a96b05 421 Pfam PF00342 Phosphoglucose isomerase 51 405 4.7E-39 T 11-11-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SHALO_RS07025 cb3d97ebc8d070d458de849bb2a96b05 421 PRINTS PR00662 Glucose-6-phosphate isomerase signature 168 186 4.5E-21 T 11-11-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SHALO_RS07025 cb3d97ebc8d070d458de849bb2a96b05 421 PRINTS PR00662 Glucose-6-phosphate isomerase signature 353 371 4.5E-21 T 11-11-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SHALO_RS07025 cb3d97ebc8d070d458de849bb2a96b05 421 PRINTS PR00662 Glucose-6-phosphate isomerase signature 242 263 4.5E-21 T 11-11-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SHALO_RS07025 cb3d97ebc8d070d458de849bb2a96b05 421 PRINTS PR00662 Glucose-6-phosphate isomerase signature 58 77 4.5E-21 T 11-11-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SHALO_RS07025 cb3d97ebc8d070d458de849bb2a96b05 421 PRINTS PR00662 Glucose-6-phosphate isomerase signature 371 385 4.5E-21 T 11-11-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SHALO_RS07025 cb3d97ebc8d070d458de849bb2a96b05 421 PRINTS PR00662 Glucose-6-phosphate isomerase signature 385 398 4.5E-21 T 11-11-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SHALO_RS07025 cb3d97ebc8d070d458de849bb2a96b05 421 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 2 412 22.562 T 11-11-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SHALO_RS07025 cb3d97ebc8d070d458de849bb2a96b05 421 SUPERFAMILY SSF53697 37 409 4.31E-98 T 11-11-2016 SHALO_RS07025 cb3d97ebc8d070d458de849bb2a96b05 421 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 385 402 - T 11-11-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SHALO_RS04915 079a9b51d9146f1bdc0c305c7fa2bd8f 502 Gene3D G3DSA:3.30.450.20 5 103 1.1E-25 T 11-11-2016 SHALO_RS04915 079a9b51d9146f1bdc0c305c7fa2bd8f 502 Pfam PF00563 EAL domain 270 499 1.1E-59 T 11-11-2016 IPR001633 EAL domain SHALO_RS04915 079a9b51d9146f1bdc0c305c7fa2bd8f 502 SUPERFAMILY SSF55785 2 101 8.72E-28 T 11-11-2016 IPR000014 PAS domain SHALO_RS04915 079a9b51d9146f1bdc0c305c7fa2bd8f 502 SUPERFAMILY SSF141868 269 499 1.11E-66 T 11-11-2016 IPR001633 EAL domain SHALO_RS04915 079a9b51d9146f1bdc0c305c7fa2bd8f 502 SMART SM00052 263 500 1.8E-54 T 11-11-2016 IPR001633 EAL domain SHALO_RS04915 079a9b51d9146f1bdc0c305c7fa2bd8f 502 Gene3D G3DSA:3.20.20.450 269 499 2.9E-66 T 11-11-2016 IPR001633 EAL domain SHALO_RS04915 079a9b51d9146f1bdc0c305c7fa2bd8f 502 Pfam PF08447 PAS fold 12 96 4.5E-16 T 11-11-2016 IPR013655 PAS fold-3 GO:0005515 SHALO_RS04915 079a9b51d9146f1bdc0c305c7fa2bd8f 502 SMART SM00086 62 104 5.4E-6 T 11-11-2016 IPR001610 PAC motif SHALO_RS04915 079a9b51d9146f1bdc0c305c7fa2bd8f 502 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 6 104 1.2E-16 T 11-11-2016 IPR000014 PAS domain SHALO_RS08005 a015cb24ea1599e67f1e1dd9df7e7e2f 207 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 2 194 1.6E-48 T 11-11-2016 IPR002751 Cobalamin (vitamin B12) biosynthesis CbiM family GO:0000041|GO:0016021 SHALO_RS00265 7c11c6bd58d1940e64f43656810fcf42 687 SUPERFAMILY SSF53706 5 559 8.51E-133 T 11-11-2016 SHALO_RS00265 7c11c6bd58d1940e64f43656810fcf42 687 Gene3D G3DSA:2.40.40.20 577 684 3.0E-18 T 11-11-2016 SHALO_RS00265 7c11c6bd58d1940e64f43656810fcf42 687 Pfam PF01568 Molydopterin dinucleotide binding domain 577 680 5.6E-13 T 11-11-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 SHALO_RS00265 7c11c6bd58d1940e64f43656810fcf42 687 Gene3D G3DSA:2.20.25.90 2 62 3.2E-18 T 11-11-2016 SHALO_RS00265 7c11c6bd58d1940e64f43656810fcf42 687 Gene3D G3DSA:3.40.50.740 345 552 2.4E-64 T 11-11-2016 SHALO_RS00265 7c11c6bd58d1940e64f43656810fcf42 687 Gene3D G3DSA:3.40.50.740 63 156 2.4E-64 T 11-11-2016 SHALO_RS00265 7c11c6bd58d1940e64f43656810fcf42 687 Gene3D G3DSA:3.40.228.10 157 344 2.3E-42 T 11-11-2016 SHALO_RS00265 7c11c6bd58d1940e64f43656810fcf42 687 SUPERFAMILY SSF50692 577 686 1.49E-17 T 11-11-2016 IPR009010 Aspartate decarboxylase-like domain SHALO_RS00265 7c11c6bd58d1940e64f43656810fcf42 687 SMART SM00926 4 58 2.3E-14 T 11-11-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS00265 7c11c6bd58d1940e64f43656810fcf42 687 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 6 57 1.4E-14 T 11-11-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS00265 7c11c6bd58d1940e64f43656810fcf42 687 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 9 27 - T 11-11-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 SHALO_RS00265 7c11c6bd58d1940e64f43656810fcf42 687 Pfam PF00384 Molybdopterin oxidoreductase 61 485 1.1E-43 T 11-11-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS06345 dcf1a28b1d12b81c4401ef8f81778930 847 Pfam PF01568 Molydopterin dinucleotide binding domain 704 822 5.8E-24 T 11-11-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 SHALO_RS06345 dcf1a28b1d12b81c4401ef8f81778930 847 Gene3D G3DSA:3.90.55.10 524 633 5.8E-27 T 11-11-2016 SHALO_RS06345 dcf1a28b1d12b81c4401ef8f81778930 847 Gene3D G3DSA:3.40.50.740 442 523 4.1E-41 T 11-11-2016 SHALO_RS06345 dcf1a28b1d12b81c4401ef8f81778930 847 Gene3D G3DSA:3.40.50.740 90 185 4.1E-41 T 11-11-2016 SHALO_RS06345 dcf1a28b1d12b81c4401ef8f81778930 847 SUPERFAMILY SSF50692 695 844 1.13E-41 T 11-11-2016 IPR009010 Aspartate decarboxylase-like domain SHALO_RS06345 dcf1a28b1d12b81c4401ef8f81778930 847 TIGRFAM TIGR00509 bisC_fam: molybdopterin guanine dinucleotide-containing S/N-oxide reductases 49 845 0.0 T 11-11-2016 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase GO:0016491|GO:0055114 SHALO_RS06345 dcf1a28b1d12b81c4401ef8f81778930 847 Gene3D G3DSA:2.40.40.20 679 840 5.0E-54 T 11-11-2016 SHALO_RS06345 dcf1a28b1d12b81c4401ef8f81778930 847 Gene3D G3DSA:3.40.228.10 186 416 8.0E-62 T 11-11-2016 SHALO_RS06345 dcf1a28b1d12b81c4401ef8f81778930 847 SUPERFAMILY SSF53706 50 701 3.93E-152 T 11-11-2016 SHALO_RS06345 dcf1a28b1d12b81c4401ef8f81778930 847 Pfam PF00384 Molybdopterin oxidoreductase 92 577 6.5E-85 T 11-11-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS02710 fedab4cd08ce1e21ebf099da0f91df69 83 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 9 67 6.6E-8 T 11-11-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM SHALO_RS02710 fedab4cd08ce1e21ebf099da0f91df69 83 SUPERFAMILY SSF143120 9 59 4.58E-6 T 11-11-2016 SHALO_RS10145 6d60989563e1edfc350a32f6f72ad531 318 SUPERFAMILY SSF56322 17 314 1.05E-69 T 11-11-2016 IPR005801 ADC synthase GO:0009058 SHALO_RS10145 6d60989563e1edfc350a32f6f72ad531 318 Pfam PF00425 chorismate binding enzyme 67 312 3.6E-62 T 11-11-2016 IPR015890 Chorismate-utilising enzyme, C-terminal SHALO_RS10145 6d60989563e1edfc350a32f6f72ad531 318 Gene3D G3DSA:3.60.120.10 53 313 6.9E-74 T 11-11-2016 IPR005801 ADC synthase GO:0009058 SHALO_RS10145 6d60989563e1edfc350a32f6f72ad531 318 PRINTS PR00095 Anthranilate synthase component I signature 171 184 5.7E-9 T 11-11-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 SHALO_RS10145 6d60989563e1edfc350a32f6f72ad531 318 PRINTS PR00095 Anthranilate synthase component I signature 255 269 5.7E-9 T 11-11-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 SHALO_RS10145 6d60989563e1edfc350a32f6f72ad531 318 PRINTS PR00095 Anthranilate synthase component I signature 269 283 5.7E-9 T 11-11-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 SHALO_RS10145 6d60989563e1edfc350a32f6f72ad531 318 PRINTS PR00095 Anthranilate synthase component I signature 157 170 5.7E-9 T 11-11-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 SHALO_RS08400 d742ad5894ed2204c5286688c5982cc1 1008 SUPERFAMILY SSF82714 688 774 5.36E-12 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SHALO_RS08400 d742ad5894ed2204c5286688c5982cc1 1008 PRINTS PR00702 Acriflavin resistance protein family signature 593 607 2.9E-64 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SHALO_RS08400 d742ad5894ed2204c5286688c5982cc1 1008 PRINTS PR00702 Acriflavin resistance protein family signature 347 368 2.9E-64 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SHALO_RS08400 d742ad5894ed2204c5286688c5982cc1 1008 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 2.9E-64 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SHALO_RS08400 d742ad5894ed2204c5286688c5982cc1 1008 PRINTS PR00702 Acriflavin resistance protein family signature 428 451 2.9E-64 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SHALO_RS08400 d742ad5894ed2204c5286688c5982cc1 1008 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 2.9E-64 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SHALO_RS08400 d742ad5894ed2204c5286688c5982cc1 1008 PRINTS PR00702 Acriflavin resistance protein family signature 375 399 2.9E-64 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SHALO_RS08400 d742ad5894ed2204c5286688c5982cc1 1008 PRINTS PR00702 Acriflavin resistance protein family signature 453 476 2.9E-64 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SHALO_RS08400 d742ad5894ed2204c5286688c5982cc1 1008 PRINTS PR00702 Acriflavin resistance protein family signature 527 544 2.9E-64 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SHALO_RS08400 d742ad5894ed2204c5286688c5982cc1 1008 PRINTS PR00702 Acriflavin resistance protein family signature 320 343 2.9E-64 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SHALO_RS08400 d742ad5894ed2204c5286688c5982cc1 1008 SUPERFAMILY SSF82693 540 632 5.75E-10 T 11-11-2016 SHALO_RS08400 d742ad5894ed2204c5286688c5982cc1 1008 Gene3D G3DSA:3.30.2090.10 687 771 1.4E-13 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SHALO_RS08400 d742ad5894ed2204c5286688c5982cc1 1008 Gene3D G3DSA:3.30.2090.10 177 253 1.0E-9 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SHALO_RS08400 d742ad5894ed2204c5286688c5982cc1 1008 Gene3D G3DSA:3.30.70.1430 545 632 2.3E-6 T 11-11-2016 SHALO_RS08400 d742ad5894ed2204c5286688c5982cc1 1008 Gene3D G3DSA:3.30.70.1320 133 173 1.5E-13 T 11-11-2016 SHALO_RS08400 d742ad5894ed2204c5286688c5982cc1 1008 Gene3D G3DSA:3.30.70.1320 260 287 1.5E-13 T 11-11-2016 SHALO_RS08400 d742ad5894ed2204c5286688c5982cc1 1008 Gene3D G3DSA:3.30.70.1430 38 130 2.4E-27 T 11-11-2016 SHALO_RS08400 d742ad5894ed2204c5286688c5982cc1 1008 Pfam PF00873 AcrB/AcrD/AcrF family 1 991 1.5E-272 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SHALO_RS08400 d742ad5894ed2204c5286688c5982cc1 1008 SUPERFAMILY SSF82714 177 255 4.58E-10 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SHALO_RS08400 d742ad5894ed2204c5286688c5982cc1 1008 SUPERFAMILY SSF82693 38 128 4.36E-25 T 11-11-2016 SHALO_RS08400 d742ad5894ed2204c5286688c5982cc1 1008 Gene3D G3DSA:1.10.3850.10 780 993 2.3E-64 T 11-11-2016 SHALO_RS08400 d742ad5894ed2204c5286688c5982cc1 1008 SUPERFAMILY SSF82693 133 176 3.49E-16 T 11-11-2016 SHALO_RS08400 d742ad5894ed2204c5286688c5982cc1 1008 SUPERFAMILY SSF82693 258 314 3.49E-16 T 11-11-2016 SHALO_RS08400 d742ad5894ed2204c5286688c5982cc1 1008 SUPERFAMILY SSF82866 280 479 1.27E-39 T 11-11-2016 SHALO_RS08400 d742ad5894ed2204c5286688c5982cc1 1008 SUPERFAMILY SSF82866 773 995 1.03E-51 T 11-11-2016 SHALO_RS08400 d742ad5894ed2204c5286688c5982cc1 1008 Gene3D G3DSA:1.20.1640.10 288 485 2.3E-47 T 11-11-2016 SHALO_RS02290 3deccd282ff2b13f055ceb07dab163ef 255 PIRSF PIRSF029755 1 255 3.5E-103 T 11-11-2016 IPR016938 Uncharacterised protein family UPF0317 SHALO_RS02290 3deccd282ff2b13f055ceb07dab163ef 255 Pfam PF07286 Protein of unknown function (DUF1445) 105 247 4.8E-64 T 11-11-2016 IPR009906 Protein of unknown function DUF1445 SHALO_RS02290 3deccd282ff2b13f055ceb07dab163ef 255 SUPERFAMILY SSF160920 1 248 2.22E-98 T 11-11-2016 SHALO_RS02290 3deccd282ff2b13f055ceb07dab163ef 255 Gene3D G3DSA:3.40.1640.10 1 157 4.6E-53 T 11-11-2016 SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1362 1380 - T 11-11-2016 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 SUPERFAMILY SSF51120 2366 2516 7.06E-13 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 SUPERFAMILY SSF51120 2030 2188 5.36E-22 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 2251 2269 - T 11-11-2016 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1610 1628 - T 11-11-2016 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 SUPERFAMILY SSF51120 1338 1496 4.19E-32 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 SUPERFAMILY SSF51120 2505 2608 3.92E-20 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 2564 2582 - T 11-11-2016 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1556 1574 - T 11-11-2016 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1220 1238 - T 11-11-2016 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1175 1193 - T 11-11-2016 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1619 1637 - T 11-11-2016 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 SUPERFAMILY SSF51120 1737 1844 6.8E-6 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1022 1040 - T 11-11-2016 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 837 855 - T 11-11-2016 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 SUPERFAMILY SSF51120 628 761 1.7E-6 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 Pfam PF06594 Haemolysin-type calcium binding protein related domain 2473 2518 1.2E-6 T 11-11-2016 IPR010566 Haemolysin-type calcium binding-related SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 Pfam PF06594 Haemolysin-type calcium binding protein related domain 1804 1846 1.4E-4 T 11-11-2016 IPR010566 Haemolysin-type calcium binding-related SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 Pfam PF06594 Haemolysin-type calcium binding protein related domain 1289 1329 3.2E-7 T 11-11-2016 IPR010566 Haemolysin-type calcium binding-related SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 Pfam PF06594 Haemolysin-type calcium binding protein related domain 723 761 1.1E-9 T 11-11-2016 IPR010566 Haemolysin-type calcium binding-related SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 Pfam PF06594 Haemolysin-type calcium binding protein related domain 1102 1143 2.4E-6 T 11-11-2016 IPR010566 Haemolysin-type calcium binding-related SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 Pfam PF06594 Haemolysin-type calcium binding protein related domain 2140 2187 6.1E-7 T 11-11-2016 IPR010566 Haemolysin-type calcium binding-related SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 Pfam PF06594 Haemolysin-type calcium binding protein related domain 1678 1722 1.0E-8 T 11-11-2016 IPR010566 Haemolysin-type calcium binding-related SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 Pfam PF06594 Haemolysin-type calcium binding protein related domain 2326 2385 2.5E-8 T 11-11-2016 IPR010566 Haemolysin-type calcium binding-related SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 Pfam PF06594 Haemolysin-type calcium binding protein related domain 1986 2023 6.9E-7 T 11-11-2016 IPR010566 Haemolysin-type calcium binding-related SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 SUPERFAMILY SSF51120 770 908 6.28E-26 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 Gene3D G3DSA:2.150.10.10 2188 2385 1.3E-37 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 Gene3D G3DSA:2.150.10.10 1736 1846 5.6E-8 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 Gene3D G3DSA:2.150.10.10 1150 1332 2.6E-29 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 Gene3D G3DSA:2.150.10.10 1339 1513 1.0E-37 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 Gene3D G3DSA:2.150.10.10 2025 2187 4.8E-26 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 Gene3D G3DSA:2.150.10.10 2525 2608 1.6E-19 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 Gene3D G3DSA:2.150.10.10 768 923 7.3E-30 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 Gene3D G3DSA:2.150.10.10 1868 2024 8.5E-26 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 Gene3D G3DSA:2.150.10.10 2391 2517 3.5E-17 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 Gene3D G3DSA:2.150.10.10 1532 1725 2.7E-35 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 Gene3D G3DSA:2.150.10.10 944 1147 9.8E-35 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1193 1211 - T 11-11-2016 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 2054 2072 - T 11-11-2016 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 SUPERFAMILY SSF51120 945 1146 6.8E-26 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1004 1022 - T 11-11-2016 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1211 1229 - T 11-11-2016 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 2582 2600 - T 11-11-2016 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1910 1928 - T 11-11-2016 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1574 1592 - T 11-11-2016 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1031 1049 - T 11-11-2016 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 SUPERFAMILY SSF51120 1134 1299 3.01E-24 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 2063 2081 - T 11-11-2016 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1425 1443 - T 11-11-2016 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 828 846 - T 11-11-2016 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 SUPERFAMILY SSF51120 1533 1721 4.32E-28 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 SUPERFAMILY SSF51120 1854 2024 2.88E-25 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1901 1919 - T 11-11-2016 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 SUPERFAMILY SSF51120 2186 2338 1.83E-28 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 PRINTS PR00313 NodO calcium binding signature 981 989 6.1E-9 T 11-11-2016 SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 PRINTS PR00313 NodO calcium binding signature 1017 1025 6.1E-9 T 11-11-2016 SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 PRINTS PR00313 NodO calcium binding signature 1044 1053 6.1E-9 T 11-11-2016 SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 PRINTS PR00313 NodO calcium binding signature 847 858 6.1E-9 T 11-11-2016 SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1172 1186 2.0 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2075 2092 0.15 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1205 1222 0.032 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1017 1033 0.029 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2408 2424 0.0019 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2550 2566 0.0042 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 840 856 0.019 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2219 2235 0.0053 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1187 1204 0.018 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2237 2253 0.0033 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1922 1938 2.0 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1359 1373 1.3 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2585 2602 0.1 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1410 1427 0.12 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1034 1050 0.24 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1889 1903 0.42 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2048 2065 0.25 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1428 1444 0.0084 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1569 1585 0.41 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2264 2279 0.041 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 798 811 0.27 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1550 1567 1.5 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 689 704 43.0 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1904 1921 1.1 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 999 1015 0.46 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1748 1761 39.0 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 962 979 3.1 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1623 1638 0.16 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1393 1409 0.079 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2568 2584 0.0018 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1375 1391 0.13 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1586 1603 1.5 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1604 1621 1.8 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 813 830 0.027 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1416 1434 - T 11-11-2016 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 968 986 - T 11-11-2016 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_RS02120 3801d290557c52947d26606f49cb9ff6 2628 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 2233 2251 - T 11-11-2016 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_RS08285 c14a23a801f1d885f5ba7a4e915c6ef8 536 Gene3D G3DSA:2.30.30.60 331 394 4.0E-7 T 11-11-2016 SHALO_RS08285 c14a23a801f1d885f5ba7a4e915c6ef8 536 SUPERFAMILY SSF50182 315 395 4.25E-7 T 11-11-2016 IPR010920 LSM domain SHALO_RS08285 c14a23a801f1d885f5ba7a4e915c6ef8 536 Pfam PF00924 Mechanosensitive ion channel 271 464 3.9E-37 T 11-11-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 SHALO_RS12005 d25b4156694f8441db764042e66a065e 376 SUPERFAMILY SSF52021 5 149 1.44E-48 T 11-11-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 SHALO_RS12005 d25b4156694f8441db764042e66a065e 376 Gene3D G3DSA:3.40.50.880 154 374 7.7E-58 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like SHALO_RS12005 d25b4156694f8441db764042e66a065e 376 PRINTS PR00096 Glutamine amidotransferase superfamily signature 239 248 1.2E-10 T 11-11-2016 SHALO_RS12005 d25b4156694f8441db764042e66a065e 376 PRINTS PR00096 Glutamine amidotransferase superfamily signature 267 278 1.2E-10 T 11-11-2016 SHALO_RS12005 d25b4156694f8441db764042e66a065e 376 PRINTS PR00096 Glutamine amidotransferase superfamily signature 351 364 1.2E-10 T 11-11-2016 SHALO_RS12005 d25b4156694f8441db764042e66a065e 376 Pfam PF00117 Glutamine amidotransferase class-I 196 373 2.7E-39 T 11-11-2016 IPR017926 Glutamine amidotransferase SHALO_RS12005 d25b4156694f8441db764042e66a065e 376 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 8 374 3.6E-129 T 11-11-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 SHALO_RS12005 d25b4156694f8441db764042e66a065e 376 Gene3D G3DSA:3.50.30.20 7 148 1.5E-48 T 11-11-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 SHALO_RS12005 d25b4156694f8441db764042e66a065e 376 SUPERFAMILY SSF52317 189 374 1.99E-47 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like SHALO_RS12005 d25b4156694f8441db764042e66a065e 376 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 7 129 6.0E-44 T 11-11-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 SHALO_RS12005 d25b4156694f8441db764042e66a065e 376 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 236 250 3.1E-30 T 11-11-2016 SHALO_RS12005 d25b4156694f8441db764042e66a065e 376 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 193 207 3.1E-30 T 11-11-2016 SHALO_RS12005 d25b4156694f8441db764042e66a065e 376 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 309 320 3.1E-30 T 11-11-2016 SHALO_RS12005 d25b4156694f8441db764042e66a065e 376 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 267 283 3.1E-30 T 11-11-2016 SHALO_RS12005 d25b4156694f8441db764042e66a065e 376 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 284 301 3.1E-30 T 11-11-2016 SHALO_RS12005 d25b4156694f8441db764042e66a065e 376 PRINTS PR00097 Anthranilate synthase component II signature 239 248 1.7E-5 T 11-11-2016 SHALO_RS12005 d25b4156694f8441db764042e66a065e 376 PRINTS PR00097 Anthranilate synthase component II signature 351 364 1.7E-5 T 11-11-2016 SHALO_RS12005 d25b4156694f8441db764042e66a065e 376 PRINTS PR00097 Anthranilate synthase component II signature 267 278 1.7E-5 T 11-11-2016 SHALO_RS12005 d25b4156694f8441db764042e66a065e 376 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 4 376 41.404 T 11-11-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 SHALO_RS12005 d25b4156694f8441db764042e66a065e 376 SMART SM01097 4 134 2.8E-68 T 11-11-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 SHALO_RS10805 dcde4b2adbe624cb2aedb7a4a79edc6b 397 Gene3D G3DSA:3.10.400.10 6 139 1.3E-16 T 11-11-2016 SHALO_RS10805 dcde4b2adbe624cb2aedb7a4a79edc6b 397 Pfam PF01747 ATP-sulfurylase 149 349 1.5E-47 T 11-11-2016 IPR024951 Sulphate adenylyltransferase catalytic domain GO:0004781 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 SHALO_RS10805 dcde4b2adbe624cb2aedb7a4a79edc6b 397 Gene3D G3DSA:3.40.50.620 155 360 1.9E-46 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHALO_RS10805 dcde4b2adbe624cb2aedb7a4a79edc6b 397 Pfam PF14306 PUA-like domain 6 137 8.8E-12 T 11-11-2016 IPR025980 ATP-sulfurylase PUA-like domain KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 SHALO_RS10805 dcde4b2adbe624cb2aedb7a4a79edc6b 397 SUPERFAMILY SSF88697 5 139 7.75E-19 T 11-11-2016 IPR015947 PUA-like domain SHALO_RS10805 dcde4b2adbe624cb2aedb7a4a79edc6b 397 SUPERFAMILY SSF52374 143 357 1.57E-52 T 11-11-2016 SHALO_RS10700 93f29456f09c90d8704980ba6e3461ac 500 Pfam PF00361 Proton-conducting membrane transporter 11 259 9.7E-46 T 11-11-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS10700 93f29456f09c90d8704980ba6e3461ac 500 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 231 257 2.3E-7 T 11-11-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS10700 93f29456f09c90d8704980ba6e3461ac 500 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 82 106 2.3E-7 T 11-11-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS10700 93f29456f09c90d8704980ba6e3461ac 500 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 13 37 2.3E-7 T 11-11-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS02505 4df7a5f49932567ba85ce667a2fce246 845 TIGRFAM TIGR00509 bisC_fam: molybdopterin guanine dinucleotide-containing S/N-oxide reductases 43 842 0.0 T 11-11-2016 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase GO:0016491|GO:0055114 SHALO_RS02505 4df7a5f49932567ba85ce667a2fce246 845 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 740 767 - T 11-11-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 SHALO_RS02505 4df7a5f49932567ba85ce667a2fce246 845 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 525 542 - T 11-11-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 SHALO_RS02505 4df7a5f49932567ba85ce667a2fce246 845 Pfam PF00384 Molybdopterin oxidoreductase 86 579 5.4E-86 T 11-11-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS02505 4df7a5f49932567ba85ce667a2fce246 845 Gene3D G3DSA:3.40.228.10 180 419 2.4E-63 T 11-11-2016 SHALO_RS02505 4df7a5f49932567ba85ce667a2fce246 845 Gene3D G3DSA:3.40.50.740 446 526 2.6E-45 T 11-11-2016 SHALO_RS02505 4df7a5f49932567ba85ce667a2fce246 845 Gene3D G3DSA:3.40.50.740 80 179 2.6E-45 T 11-11-2016 SHALO_RS02505 4df7a5f49932567ba85ce667a2fce246 845 SUPERFAMILY SSF50692 695 841 4.29E-44 T 11-11-2016 IPR009010 Aspartate decarboxylase-like domain SHALO_RS02505 4df7a5f49932567ba85ce667a2fce246 845 SUPERFAMILY SSF53706 45 701 3.27E-167 T 11-11-2016 SHALO_RS02505 4df7a5f49932567ba85ce667a2fce246 845 Gene3D G3DSA:2.40.40.20 675 833 9.5E-59 T 11-11-2016 SHALO_RS02505 4df7a5f49932567ba85ce667a2fce246 845 Gene3D G3DSA:3.90.55.10 527 632 1.6E-36 T 11-11-2016 SHALO_RS02505 4df7a5f49932567ba85ce667a2fce246 845 Pfam PF01568 Molydopterin dinucleotide binding domain 701 817 4.7E-28 T 11-11-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 SHALO_RS13815 788d44d9d019af34899d8105f03d0c50 192 PIRSF PIRSF001296 1 189 1.0E-63 T 11-11-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 SHALO_RS13815 788d44d9d019af34899d8105f03d0c50 192 TIGRFAM TIGR00681 kdpC: K+-transporting ATPase, C subunit 4 185 4.3E-57 T 11-11-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 SHALO_RS13815 788d44d9d019af34899d8105f03d0c50 192 Pfam PF02669 K+-transporting ATPase, c chain 6 185 6.1E-61 T 11-11-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 SHALO_RS13815 788d44d9d019af34899d8105f03d0c50 192 Hamap MF_00276 Potassium-transporting ATPase KdpC subunit [kdpC]. 1 186 30.944 T 11-11-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 SHALO_RS14660 e83ce7e87be02e185ce8f74f20e79eb2 344 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 312 1.0E-73 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS14660 e83ce7e87be02e185ce8f74f20e79eb2 344 Gene3D G3DSA:3.40.50.720 1 184 4.9E-58 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS14660 e83ce7e87be02e185ce8f74f20e79eb2 344 Gene3D G3DSA:3.90.25.10 185 324 6.1E-42 T 11-11-2016 SHALO_RS14660 e83ce7e87be02e185ce8f74f20e79eb2 344 SUPERFAMILY SSF51735 1 324 7.1E-89 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS10070 0e877b124856d0e30cb63ddc9e010059 404 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 126 136 - T 11-11-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 SHALO_RS10070 0e877b124856d0e30cb63ddc9e010059 404 Gene3D G3DSA:3.30.300.10 139 246 2.3E-21 T 11-11-2016 SHALO_RS10070 0e877b124856d0e30cb63ddc9e010059 404 SUPERFAMILY SSF55973 123 248 7.46E-31 T 11-11-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 SHALO_RS10070 0e877b124856d0e30cb63ddc9e010059 404 SUPERFAMILY SSF55973 254 401 1.49E-48 T 11-11-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 SHALO_RS10070 0e877b124856d0e30cb63ddc9e010059 404 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 7 111 8.5E-29 T 11-11-2016 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 SHALO_RS10070 0e877b124856d0e30cb63ddc9e010059 404 PIRSF PIRSF000497 1 404 1.5E-134 T 11-11-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 SHALO_RS10070 0e877b124856d0e30cb63ddc9e010059 404 SUPERFAMILY SSF55973 6 120 1.2E-31 T 11-11-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 SHALO_RS10070 0e877b124856d0e30cb63ddc9e010059 404 Pfam PF02772 S-adenosylmethionine synthetase, central domain 124 247 2.6E-28 T 11-11-2016 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 SHALO_RS10070 0e877b124856d0e30cb63ddc9e010059 404 Gene3D G3DSA:3.30.300.10 14 119 4.0E-40 T 11-11-2016 SHALO_RS10070 0e877b124856d0e30cb63ddc9e010059 404 Gene3D G3DSA:3.30.300.10 247 273 4.0E-40 T 11-11-2016 SHALO_RS10070 0e877b124856d0e30cb63ddc9e010059 404 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 254 392 2.8E-49 T 11-11-2016 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 SHALO_RS10070 0e877b124856d0e30cb63ddc9e010059 404 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 8 401 5.4E-109 T 11-11-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 SHALO_RS10070 0e877b124856d0e30cb63ddc9e010059 404 Gene3D G3DSA:3.30.300.10 274 401 9.0E-51 T 11-11-2016 SHALO_RS03665 c945641a16973ce346640e5a48e0068e 379 SUPERFAMILY SSF57938 141 214 1.83E-18 T 11-11-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 SHALO_RS03665 c945641a16973ce346640e5a48e0068e 379 SUPERFAMILY SSF46565 5 115 2.49E-33 T 11-11-2016 IPR001623 DnaJ domain SHALO_RS03665 c945641a16973ce346640e5a48e0068e 379 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 354 1.7E-124 T 11-11-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 SHALO_RS03665 c945641a16973ce346640e5a48e0068e 379 SUPERFAMILY SSF49493 126 159 3.4E-15 T 11-11-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 SHALO_RS03665 c945641a16973ce346640e5a48e0068e 379 SUPERFAMILY SSF49493 219 259 3.4E-15 T 11-11-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 SHALO_RS03665 c945641a16973ce346640e5a48e0068e 379 Gene3D G3DSA:2.60.260.20 126 150 2.6E-15 T 11-11-2016 SHALO_RS03665 c945641a16973ce346640e5a48e0068e 379 Gene3D G3DSA:2.60.260.20 219 259 2.6E-15 T 11-11-2016 SHALO_RS03665 c945641a16973ce346640e5a48e0068e 379 Gene3D G3DSA:2.60.260.20 262 339 8.6E-12 T 11-11-2016 SHALO_RS03665 c945641a16973ce346640e5a48e0068e 379 SMART SM00271 4 62 1.4E-32 T 11-11-2016 IPR001623 DnaJ domain SHALO_RS03665 c945641a16973ce346640e5a48e0068e 379 Gene3D G3DSA:1.10.287.110 4 105 5.8E-34 T 11-11-2016 IPR001623 DnaJ domain SHALO_RS03665 c945641a16973ce346640e5a48e0068e 379 PRINTS PR00625 DnaJ domain signature 42 62 1.2E-28 T 11-11-2016 IPR001623 DnaJ domain SHALO_RS03665 c945641a16973ce346640e5a48e0068e 379 PRINTS PR00625 DnaJ domain signature 62 81 1.2E-28 T 11-11-2016 IPR001623 DnaJ domain SHALO_RS03665 c945641a16973ce346640e5a48e0068e 379 PRINTS PR00625 DnaJ domain signature 7 25 1.2E-28 T 11-11-2016 IPR001623 DnaJ domain SHALO_RS03665 c945641a16973ce346640e5a48e0068e 379 PRINTS PR00625 DnaJ domain signature 25 40 1.2E-28 T 11-11-2016 IPR001623 DnaJ domain SHALO_RS03665 c945641a16973ce346640e5a48e0068e 379 Pfam PF00684 DnaJ central domain 154 213 2.7E-13 T 11-11-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 SHALO_RS03665 c945641a16973ce346640e5a48e0068e 379 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 377 35.062 T 11-11-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 SHALO_RS03665 c945641a16973ce346640e5a48e0068e 379 Pfam PF01556 DnaJ C terminal domain 127 338 1.5E-31 T 11-11-2016 IPR002939 Chaperone DnaJ, C-terminal SHALO_RS03665 c945641a16973ce346640e5a48e0068e 379 Pfam PF00226 DnaJ domain 5 67 1.8E-28 T 11-11-2016 IPR001623 DnaJ domain SHALO_RS03665 c945641a16973ce346640e5a48e0068e 379 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 11-11-2016 IPR018253 DnaJ domain, conserved site SHALO_RS03665 c945641a16973ce346640e5a48e0068e 379 Gene3D G3DSA:2.10.230.10 151 214 7.9E-20 T 11-11-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 SHALO_RS03665 c945641a16973ce346640e5a48e0068e 379 SUPERFAMILY SSF49493 264 349 1.06E-15 T 11-11-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 SHALO_RS10055 cb34751972ac9b91c878c221727da62b 527 Gene3D G3DSA:1.20.1640.10 345 513 1.2E-23 T 11-11-2016 SHALO_RS10055 cb34751972ac9b91c878c221727da62b 527 SUPERFAMILY SSF82866 313 510 5.1E-39 T 11-11-2016 SHALO_RS10055 cb34751972ac9b91c878c221727da62b 527 PRINTS PR00702 Acriflavin resistance protein family signature 405 429 2.6E-5 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SHALO_RS10055 cb34751972ac9b91c878c221727da62b 527 PRINTS PR00702 Acriflavin resistance protein family signature 352 375 2.6E-5 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SHALO_RS10055 cb34751972ac9b91c878c221727da62b 527 PRINTS PR00702 Acriflavin resistance protein family signature 480 503 2.6E-5 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SHALO_RS10055 cb34751972ac9b91c878c221727da62b 527 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 3 515 40.466 T 11-11-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 SHALO_RS10055 cb34751972ac9b91c878c221727da62b 527 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 266 496 2.9E-77 T 11-11-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial SHALO_RS10055 cb34751972ac9b91c878c221727da62b 527 Pfam PF02355 Protein export membrane protein 339 497 1.3E-14 T 11-11-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial SHALO_RS10055 cb34751972ac9b91c878c221727da62b 527 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 39 502 4.0E-137 T 11-11-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 SHALO_RS02685 cf39b9e26731c1c6dd1aae29111d65ec 457 Gene3D G3DSA:3.80.30.20 48 276 3.1E-32 T 11-11-2016 IPR023404 Radical SAM, alpha/beta horseshoe SHALO_RS02685 cf39b9e26731c1c6dd1aae29111d65ec 457 SUPERFAMILY SSF102114 4 443 3.4E-132 T 11-11-2016 SHALO_RS02685 cf39b9e26731c1c6dd1aae29111d65ec 457 SMART SM00729 47 269 2.2E-57 T 11-11-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 SHALO_RS02685 cf39b9e26731c1c6dd1aae29111d65ec 457 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 2 457 4.8E-193 T 11-11-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22 SHALO_RS02685 cf39b9e26731c1c6dd1aae29111d65ec 457 Pfam PF04055 Radical SAM superfamily 53 225 3.2E-20 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SHALO_RS02685 cf39b9e26731c1c6dd1aae29111d65ec 457 Pfam PF06969 HemN C-terminal domain 361 416 6.6E-7 T 11-11-2016 IPR010723 HemN, C-terminal SHALO_RS02685 cf39b9e26731c1c6dd1aae29111d65ec 457 PIRSF PIRSF000167 1 453 1.1E-164 T 11-11-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22 SHALO_RS06035 d603b9919d7b92f5af6d2db7d31acbd8 222 Pfam PF00072 Response regulator receiver domain 7 112 1.9E-21 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS06035 d603b9919d7b92f5af6d2db7d31acbd8 222 SMART SM00862 147 220 1.4E-15 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS06035 d603b9919d7b92f5af6d2db7d31acbd8 222 SMART SM00448 5 115 3.6E-28 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS06035 d603b9919d7b92f5af6d2db7d31acbd8 222 Gene3D G3DSA:3.40.50.2300 3 125 3.1E-31 T 11-11-2016 SHALO_RS06035 d603b9919d7b92f5af6d2db7d31acbd8 222 SUPERFAMILY SSF52172 3 168 5.69E-33 T 11-11-2016 IPR011006 CheY-like superfamily SHALO_RS06035 d603b9919d7b92f5af6d2db7d31acbd8 222 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 220 2.5E-17 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS06035 d603b9919d7b92f5af6d2db7d31acbd8 222 Gene3D G3DSA:1.10.10.10 130 221 1.4E-21 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS11030 73960b8a915ba2442fea5c5e90f04ddf 414 SUPERFAMILY SSF46589 1 113 2.82E-20 T 11-11-2016 IPR010978 tRNA-binding arm GO:0000166 SHALO_RS11030 73960b8a915ba2442fea5c5e90f04ddf 414 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 108 5.0E-22 T 11-11-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 SHALO_RS11030 73960b8a915ba2442fea5c5e90f04ddf 414 Gene3D G3DSA:3.30.930.10 106 414 3.6E-131 T 11-11-2016 SHALO_RS11030 73960b8a915ba2442fea5c5e90f04ddf 414 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 221 397 9.8E-36 T 11-11-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 SHALO_RS11030 73960b8a915ba2442fea5c5e90f04ddf 414 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 414 38.035 T 11-11-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 SHALO_RS11030 73960b8a915ba2442fea5c5e90f04ddf 414 PRINTS PR00981 Seryl-tRNA synthetase signature 263 275 6.7E-29 T 11-11-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 SHALO_RS11030 73960b8a915ba2442fea5c5e90f04ddf 414 PRINTS PR00981 Seryl-tRNA synthetase signature 275 288 6.7E-29 T 11-11-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 SHALO_RS11030 73960b8a915ba2442fea5c5e90f04ddf 414 PRINTS PR00981 Seryl-tRNA synthetase signature 315 328 6.7E-29 T 11-11-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 SHALO_RS11030 73960b8a915ba2442fea5c5e90f04ddf 414 PRINTS PR00981 Seryl-tRNA synthetase signature 350 366 6.7E-29 T 11-11-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 SHALO_RS11030 73960b8a915ba2442fea5c5e90f04ddf 414 PRINTS PR00981 Seryl-tRNA synthetase signature 332 348 6.7E-29 T 11-11-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 SHALO_RS11030 73960b8a915ba2442fea5c5e90f04ddf 414 SUPERFAMILY SSF55681 117 414 3.94E-92 T 11-11-2016 SHALO_RS11030 73960b8a915ba2442fea5c5e90f04ddf 414 PIRSF PIRSF001529 1 414 8.4E-163 T 11-11-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 SHALO_RS11030 73960b8a915ba2442fea5c5e90f04ddf 414 Gene3D G3DSA:1.10.287.40 1 105 3.5E-15 T 11-11-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 SHALO_RS11030 73960b8a915ba2442fea5c5e90f04ddf 414 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 414 3.0E-165 T 11-11-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 SHALO_RS08905 113dbd70ec48db708e1624eb05bb8621 676 Gene3D G3DSA:3.40.50.300 274 383 2.5E-48 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS08905 113dbd70ec48db708e1624eb05bb8621 676 Gene3D G3DSA:3.40.50.300 590 671 2.5E-48 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS08905 113dbd70ec48db708e1624eb05bb8621 676 Pfam PF13361 UvrD-like helicase C-terminal domain 271 654 3.0E-44 T 11-11-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 SHALO_RS08905 113dbd70ec48db708e1624eb05bb8621 676 Gene3D G3DSA:3.40.50.300 174 269 2.6E-58 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS08905 113dbd70ec48db708e1624eb05bb8621 676 Gene3D G3DSA:3.40.50.300 4 139 2.6E-58 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS08905 113dbd70ec48db708e1624eb05bb8621 676 Pfam PF00580 UvrD/REP helicase N-terminal domain 6 105 1.3E-25 T 11-11-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 SHALO_RS08905 113dbd70ec48db708e1624eb05bb8621 676 Pfam PF00580 UvrD/REP helicase N-terminal domain 167 264 1.1E-19 T 11-11-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 SHALO_RS08905 113dbd70ec48db708e1624eb05bb8621 676 SUPERFAMILY SSF52540 4 416 4.69E-109 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS08905 113dbd70ec48db708e1624eb05bb8621 676 SUPERFAMILY SSF52540 501 659 4.69E-109 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS10220 e8bebe30cecbaf4a376d88aab6da8d61 446 SMART SM00963 1 79 3.2E-4 T 11-11-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 SHALO_RS10220 e8bebe30cecbaf4a376d88aab6da8d61 446 Pfam PF02881 SRP54-type protein, helical bundle domain 5 58 3.0E-7 T 11-11-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 SHALO_RS10220 e8bebe30cecbaf4a376d88aab6da8d61 446 SMART SM00962 94 289 1.3E-100 T 11-11-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 SHALO_RS10220 e8bebe30cecbaf4a376d88aab6da8d61 446 TIGRFAM TIGR00959 ffh: signal recognition particle protein 3 423 8.5E-148 T 11-11-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 SHALO_RS10220 e8bebe30cecbaf4a376d88aab6da8d61 446 Pfam PF02978 Signal peptide binding domain 320 420 8.0E-31 T 11-11-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 SHALO_RS10220 e8bebe30cecbaf4a376d88aab6da8d61 446 Gene3D G3DSA:1.20.120.140 3 60 8.5E-9 T 11-11-2016 SHALO_RS10220 e8bebe30cecbaf4a376d88aab6da8d61 446 Gene3D G3DSA:3.40.50.300 89 289 4.5E-69 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS10220 e8bebe30cecbaf4a376d88aab6da8d61 446 SUPERFAMILY SSF52540 88 291 2.23E-49 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS10220 e8bebe30cecbaf4a376d88aab6da8d61 446 Pfam PF00448 SRP54-type protein, GTPase domain 95 288 3.7E-70 T 11-11-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 SHALO_RS10220 e8bebe30cecbaf4a376d88aab6da8d61 446 SUPERFAMILY SSF47446 291 424 1.31E-42 T 11-11-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 SHALO_RS10220 e8bebe30cecbaf4a376d88aab6da8d61 446 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 262 275 - T 11-11-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 SHALO_RS10220 e8bebe30cecbaf4a376d88aab6da8d61 446 Gene3D G3DSA:1.10.260.30 320 425 3.9E-36 T 11-11-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 SHALO_RS10220 e8bebe30cecbaf4a376d88aab6da8d61 446 SMART SM00382 93 237 1.4E-10 T 11-11-2016 IPR003593 AAA+ ATPase domain SHALO_RS10220 e8bebe30cecbaf4a376d88aab6da8d61 446 SUPERFAMILY SSF47364 2 80 2.62E-9 T 11-11-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 SHALO_RS05290 015b28e20dd677d8af00f58ff6a38641 96 Gene3D G3DSA:1.10.260.40 1 79 2.9E-27 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SHALO_RS05290 015b28e20dd677d8af00f58ff6a38641 96 SUPERFAMILY SSF47413 8 86 7.51E-20 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SHALO_RS05290 015b28e20dd677d8af00f58ff6a38641 96 SMART SM00530 12 68 0.0038 T 11-11-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SHALO_RS05290 015b28e20dd677d8af00f58ff6a38641 96 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 3 81 1.4E-26 T 11-11-2016 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 SHALO_RS05290 015b28e20dd677d8af00f58ff6a38641 96 Pfam PF01381 Helix-turn-helix 20 66 6.8E-6 T 11-11-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SHALO_RS08065 304cdcde3e4708373d09c4cd6a8a44d7 156 SUPERFAMILY SSF55021 5 77 2.06E-18 T 11-11-2016 SHALO_RS08065 304cdcde3e4708373d09c4cd6a8a44d7 156 Pfam PF10369 Small subunit of acetolactate synthase 85 154 2.8E-13 T 11-11-2016 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 SHALO_RS08065 304cdcde3e4708373d09c4cd6a8a44d7 156 SUPERFAMILY SSF55021 78 154 1.68E-16 T 11-11-2016 SHALO_RS08065 304cdcde3e4708373d09c4cd6a8a44d7 156 Gene3D G3DSA:3.30.70.1150 84 154 1.9E-13 T 11-11-2016 SHALO_RS08065 304cdcde3e4708373d09c4cd6a8a44d7 156 Gene3D G3DSA:3.30.70.260 4 77 4.9E-29 T 11-11-2016 SHALO_RS08065 304cdcde3e4708373d09c4cd6a8a44d7 156 Pfam PF01842 ACT domain 7 71 1.4E-12 T 11-11-2016 IPR002912 ACT domain GO:0008152|GO:0016597 SHALO_RS08065 304cdcde3e4708373d09c4cd6a8a44d7 156 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 5 154 2.3E-40 T 11-11-2016 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 SHALO_RS08065 304cdcde3e4708373d09c4cd6a8a44d7 156 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 4 78 2.0E-26 T 11-11-2016 SHALO_RS10850 07233ba6220485a850b2759e63b5dadc 232 SUPERFAMILY SSF161098 10 220 2.35E-42 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHALO_RS10850 07233ba6220485a850b2759e63b5dadc 232 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 15 222 1.4E-65 T 11-11-2016 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 SHALO_RS10850 07233ba6220485a850b2759e63b5dadc 232 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 29 224 2.3E-19 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHALO_RS10850 07233ba6220485a850b2759e63b5dadc 232 Gene3D G3DSA:1.10.3720.10 13 226 3.1E-35 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHALO_RS14715 8c286675e9e929be094ba2025e7602a0 281 Hamap MF_01694 Biotin synthase [bioB]. 2 276 32.479 T 11-11-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 SHALO_RS14715 8c286675e9e929be094ba2025e7602a0 281 Gene3D G3DSA:3.20.20.70 3 275 1.2E-65 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_RS14715 8c286675e9e929be094ba2025e7602a0 281 TIGRFAM TIGR00433 bioB: biotin synthase 2 273 7.4E-87 T 11-11-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 SHALO_RS14715 8c286675e9e929be094ba2025e7602a0 281 Pfam PF04055 Radical SAM superfamily 16 174 7.3E-16 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SHALO_RS14715 8c286675e9e929be094ba2025e7602a0 281 PIRSF PIRSF001619 1 280 4.2E-81 T 11-11-2016 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 SHALO_RS14715 8c286675e9e929be094ba2025e7602a0 281 SMART SM00729 8 213 1.5E-30 T 11-11-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 SHALO_RS14715 8c286675e9e929be094ba2025e7602a0 281 SMART SM00876 185 275 2.6E-15 T 11-11-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 SHALO_RS14715 8c286675e9e929be094ba2025e7602a0 281 SUPERFAMILY SSF102114 4 275 2.88E-53 T 11-11-2016 SHALO_RS14715 8c286675e9e929be094ba2025e7602a0 281 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 200 273 5.6E-11 T 11-11-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 SHALO_RS13845 58d9f77d5e007a582c4cf39c9670a948 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 6.9E-20 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_RS13845 58d9f77d5e007a582c4cf39c9670a948 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 6.9E-20 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_RS13845 58d9f77d5e007a582c4cf39c9670a948 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 6.9E-20 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_RS13845 58d9f77d5e007a582c4cf39c9670a948 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 6.9E-20 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_RS13845 58d9f77d5e007a582c4cf39c9670a948 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 6.9E-20 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_RS13845 58d9f77d5e007a582c4cf39c9670a948 275 Pfam PF00106 short chain dehydrogenase 3 187 8.2E-43 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_RS13845 58d9f77d5e007a582c4cf39c9670a948 275 Gene3D G3DSA:3.40.50.720 3 272 5.7E-66 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS13845 58d9f77d5e007a582c4cf39c9670a948 275 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 1.5E-6 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_RS13845 58d9f77d5e007a582c4cf39c9670a948 275 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 165 1.5E-6 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_RS13845 58d9f77d5e007a582c4cf39c9670a948 275 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 126 134 1.5E-6 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_RS13845 58d9f77d5e007a582c4cf39c9670a948 275 SUPERFAMILY SSF51735 3 270 5.35E-58 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS13845 58d9f77d5e007a582c4cf39c9670a948 275 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 133 161 - T 11-11-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 SHALO_RS14525 a7ab63e79a7803c2b2dadab653bf2e73 210 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 3 207 8.8E-82 T 11-11-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 SHALO_RS14525 a7ab63e79a7803c2b2dadab653bf2e73 210 Gene3D G3DSA:3.40.50.2020 3 207 5.8E-75 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like SHALO_RS14525 a7ab63e79a7803c2b2dadab653bf2e73 210 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 3 208 42.341 T 11-11-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 SHALO_RS14525 a7ab63e79a7803c2b2dadab653bf2e73 210 Pfam PF14681 Uracil phosphoribosyltransferase 6 207 4.0E-65 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like SHALO_RS14525 a7ab63e79a7803c2b2dadab653bf2e73 210 SUPERFAMILY SSF53271 3 206 8.0E-65 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like SHALO_RS00145 e797108b2ebd3e616916c8dc3c6cd62c 447 Pfam PF05538 Campylobacter major outer membrane protein 1 447 6.5E-13 T 11-11-2016 IPR008439 Campylobacter major outer membrane SHALO_RS00145 e797108b2ebd3e616916c8dc3c6cd62c 447 Gene3D G3DSA:2.40.160.10 33 447 9.4E-53 T 11-11-2016 IPR023614 Porin domain SHALO_RS12915 f1639632b70f635c46e17fcfa596d5ce 563 Gene3D G3DSA:3.30.565.10 381 558 1.7E-27 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS12915 f1639632b70f635c46e17fcfa596d5ce 563 Pfam PF08448 PAS fold 180 287 9.9E-11 T 11-11-2016 IPR013656 PAS fold-4 SHALO_RS12915 f1639632b70f635c46e17fcfa596d5ce 563 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 457 556 1.4E-13 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS12915 f1639632b70f635c46e17fcfa596d5ce 563 Gene3D G3DSA:3.30.450.20 168 285 1.3E-15 T 11-11-2016 SHALO_RS12915 f1639632b70f635c46e17fcfa596d5ce 563 SUPERFAMILY SSF55785 167 284 3.14E-14 T 11-11-2016 IPR000014 PAS domain SHALO_RS12915 f1639632b70f635c46e17fcfa596d5ce 563 SMART SM00091 41 108 0.0079 T 11-11-2016 IPR000014 PAS domain SHALO_RS12915 f1639632b70f635c46e17fcfa596d5ce 563 SMART SM00091 173 239 1.6E-8 T 11-11-2016 IPR000014 PAS domain SHALO_RS12915 f1639632b70f635c46e17fcfa596d5ce 563 SUPERFAMILY SSF55785 45 151 5.83E-17 T 11-11-2016 IPR000014 PAS domain SHALO_RS12915 f1639632b70f635c46e17fcfa596d5ce 563 PRINTS PR00344 Bacterial sensor protein C-terminal signature 506 516 4.0E-11 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS12915 f1639632b70f635c46e17fcfa596d5ce 563 PRINTS PR00344 Bacterial sensor protein C-terminal signature 488 502 4.0E-11 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS12915 f1639632b70f635c46e17fcfa596d5ce 563 PRINTS PR00344 Bacterial sensor protein C-terminal signature 518 536 4.0E-11 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS12915 f1639632b70f635c46e17fcfa596d5ce 563 PRINTS PR00344 Bacterial sensor protein C-terminal signature 541 554 4.0E-11 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS12915 f1639632b70f635c46e17fcfa596d5ce 563 SUPERFAMILY SSF55874 395 556 5.63E-24 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS12915 f1639632b70f635c46e17fcfa596d5ce 563 SMART SM00388 323 396 6.3E-9 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS12915 f1639632b70f635c46e17fcfa596d5ce 563 Gene3D G3DSA:1.10.287.130 324 380 3.1E-8 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS12915 f1639632b70f635c46e17fcfa596d5ce 563 Pfam PF13426 PAS domain 54 151 1.8E-12 T 11-11-2016 IPR000014 PAS domain SHALO_RS12915 f1639632b70f635c46e17fcfa596d5ce 563 SUPERFAMILY SSF47384 319 392 2.16E-9 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS12915 f1639632b70f635c46e17fcfa596d5ce 563 Gene3D G3DSA:3.30.450.20 34 151 7.5E-18 T 11-11-2016 SHALO_RS12915 f1639632b70f635c46e17fcfa596d5ce 563 SMART SM00387 446 557 3.2E-18 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS12915 f1639632b70f635c46e17fcfa596d5ce 563 Pfam PF00512 His Kinase A (phospho-acceptor) domain 325 392 1.8E-11 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS12915 f1639632b70f635c46e17fcfa596d5ce 563 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 45 159 6.7E-12 T 11-11-2016 IPR000014 PAS domain SHALO_RS12915 f1639632b70f635c46e17fcfa596d5ce 563 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 176 290 2.7E-10 T 11-11-2016 IPR000014 PAS domain SHALO_RS05825 eadd02aa5672e8254074bfcccbe8619c 576 Pfam PF00072 Response regulator receiver domain 15 126 1.1E-24 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS05825 eadd02aa5672e8254074bfcccbe8619c 576 Pfam PF00990 Diguanylate cyclase, GGDEF domain 170 313 1.9E-20 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS05825 eadd02aa5672e8254074bfcccbe8619c 576 Gene3D G3DSA:3.30.70.270 170 323 2.5E-21 T 11-11-2016 SHALO_RS05825 eadd02aa5672e8254074bfcccbe8619c 576 Pfam PF00563 EAL domain 340 568 2.6E-59 T 11-11-2016 IPR001633 EAL domain SHALO_RS05825 eadd02aa5672e8254074bfcccbe8619c 576 SMART SM00052 329 573 9.8E-50 T 11-11-2016 IPR001633 EAL domain SHALO_RS05825 eadd02aa5672e8254074bfcccbe8619c 576 SMART SM00448 13 126 7.3E-31 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS05825 eadd02aa5672e8254074bfcccbe8619c 576 SMART SM00267 156 321 1.5E-10 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS05825 eadd02aa5672e8254074bfcccbe8619c 576 SUPERFAMILY SSF52172 11 155 5.83E-34 T 11-11-2016 IPR011006 CheY-like superfamily SHALO_RS05825 eadd02aa5672e8254074bfcccbe8619c 576 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 169 313 8.3E-16 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS05825 eadd02aa5672e8254074bfcccbe8619c 576 Gene3D G3DSA:3.20.20.450 337 571 4.4E-62 T 11-11-2016 IPR001633 EAL domain SHALO_RS05825 eadd02aa5672e8254074bfcccbe8619c 576 SUPERFAMILY SSF141868 339 571 1.83E-62 T 11-11-2016 IPR001633 EAL domain SHALO_RS05825 eadd02aa5672e8254074bfcccbe8619c 576 SUPERFAMILY SSF55073 174 313 1.65E-20 T 11-11-2016 IPR029787 Nucleotide cyclase SHALO_RS05825 eadd02aa5672e8254074bfcccbe8619c 576 Gene3D G3DSA:3.40.50.2300 11 155 2.0E-32 T 11-11-2016 SHALO_RS09470 8bafa0407d8e47d3775364b6f4f69185 645 Pfam PF00884 Sulfatase 172 460 1.2E-21 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 SHALO_RS09470 8bafa0407d8e47d3775364b6f4f69185 645 Gene3D G3DSA:3.40.720.10 172 471 7.4E-22 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 SHALO_RS09470 8bafa0407d8e47d3775364b6f4f69185 645 SUPERFAMILY SSF53649 171 473 2.33E-30 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 SHALO_RS06805 e6ba7805ddbe8692e1d0e209f63576c2 315 Pfam PF04463 Protein of unknown function (DUF523) 4 143 1.8E-32 T 11-11-2016 IPR007553 Domain of unknown function DUF523 SHALO_RS06805 e6ba7805ddbe8692e1d0e209f63576c2 315 Pfam PF08349 Protein of unknown function (DUF1722) 186 302 2.6E-33 T 11-11-2016 IPR013560 Domain of unknown function DUF1722 SHALO_RS02125 a36fd74ce188eb2a7eb8f27e8c07905e 1196 SUPERFAMILY SSF51120 426 574 2.27E-24 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_RS02125 a36fd74ce188eb2a7eb8f27e8c07905e 1196 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 340 358 8.3E-6 T 11-11-2016 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 SHALO_RS02125 a36fd74ce188eb2a7eb8f27e8c07905e 1196 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 996 1017 8.3E-6 T 11-11-2016 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 SHALO_RS02125 a36fd74ce188eb2a7eb8f27e8c07905e 1196 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1028 1046 - T 11-11-2016 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_RS02125 a36fd74ce188eb2a7eb8f27e8c07905e 1196 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 473 491 - T 11-11-2016 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_RS02125 a36fd74ce188eb2a7eb8f27e8c07905e 1196 SUPERFAMILY SSF51120 1003 1135 2.62E-26 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_RS02125 a36fd74ce188eb2a7eb8f27e8c07905e 1196 SUPERFAMILY SSF51120 958 1021 1.96E-12 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_RS02125 a36fd74ce188eb2a7eb8f27e8c07905e 1196 SUPERFAMILY SSF51120 857 905 1.96E-12 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_RS02125 a36fd74ce188eb2a7eb8f27e8c07905e 1196 PRINTS PR00313 NodO calcium binding signature 1059 1068 2.7E-10 T 11-11-2016 SHALO_RS02125 a36fd74ce188eb2a7eb8f27e8c07905e 1196 PRINTS PR00313 NodO calcium binding signature 1050 1058 2.7E-10 T 11-11-2016 SHALO_RS02125 a36fd74ce188eb2a7eb8f27e8c07905e 1196 PRINTS PR00313 NodO calcium binding signature 1032 1040 2.7E-10 T 11-11-2016 SHALO_RS02125 a36fd74ce188eb2a7eb8f27e8c07905e 1196 PRINTS PR00313 NodO calcium binding signature 993 1004 2.7E-10 T 11-11-2016 SHALO_RS02125 a36fd74ce188eb2a7eb8f27e8c07905e 1196 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1019 1037 - T 11-11-2016 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_RS02125 a36fd74ce188eb2a7eb8f27e8c07905e 1196 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1037 1055 - T 11-11-2016 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_RS02125 a36fd74ce188eb2a7eb8f27e8c07905e 1196 Pfam PF06594 Haemolysin-type calcium binding protein related domain 532 577 7.5E-5 T 11-11-2016 IPR010566 Haemolysin-type calcium binding-related SHALO_RS02125 a36fd74ce188eb2a7eb8f27e8c07905e 1196 Pfam PF06594 Haemolysin-type calcium binding protein related domain 357 404 8.5E-11 T 11-11-2016 IPR010566 Haemolysin-type calcium binding-related SHALO_RS02125 a36fd74ce188eb2a7eb8f27e8c07905e 1196 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 977 994 0.15 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS02125 a36fd74ce188eb2a7eb8f27e8c07905e 1196 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1031 1048 4.9E-4 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS02125 a36fd74ce188eb2a7eb8f27e8c07905e 1196 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1050 1065 0.0023 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS02125 a36fd74ce188eb2a7eb8f27e8c07905e 1196 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 303 310 53.0 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS02125 a36fd74ce188eb2a7eb8f27e8c07905e 1196 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1004 1021 0.0025 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS02125 a36fd74ce188eb2a7eb8f27e8c07905e 1196 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 432 446 2.4 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS02125 a36fd74ce188eb2a7eb8f27e8c07905e 1196 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 477 492 4.2 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS02125 a36fd74ce188eb2a7eb8f27e8c07905e 1196 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 459 475 0.46 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS02125 a36fd74ce188eb2a7eb8f27e8c07905e 1196 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 960 976 1.0 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 SHALO_RS02125 a36fd74ce188eb2a7eb8f27e8c07905e 1196 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 983 1001 - T 11-11-2016 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_RS02125 a36fd74ce188eb2a7eb8f27e8c07905e 1196 Gene3D G3DSA:2.150.10.10 424 574 5.6E-27 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_RS02125 a36fd74ce188eb2a7eb8f27e8c07905e 1196 Gene3D G3DSA:2.150.10.10 958 1154 2.0E-44 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_RS02125 a36fd74ce188eb2a7eb8f27e8c07905e 1196 Gene3D G3DSA:2.150.10.10 282 405 3.9E-5 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal SHALO_RS02125 a36fd74ce188eb2a7eb8f27e8c07905e 1196 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 464 482 - T 11-11-2016 IPR018511 Hemolysin-type calcium-binding conserved site SHALO_RS02125 a36fd74ce188eb2a7eb8f27e8c07905e 1196 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 602 642 9.4E-5 T 11-11-2016 IPR010221 VCBS repeat SHALO_RS08275 9e2b02bd086e8af550070dddffbfe1b6 467 Pfam PF02080 TrkA-C domain 147 212 4.2E-7 T 11-11-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SHALO_RS08275 9e2b02bd086e8af550070dddffbfe1b6 467 SUPERFAMILY SSF116726 146 213 1.02E-7 T 11-11-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SHALO_RS08275 9e2b02bd086e8af550070dddffbfe1b6 467 Gene3D G3DSA:3.30.70.1450 147 213 3.4E-6 T 11-11-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SHALO_RS00650 17e6365c3d484712a0cbe1d3c6c74944 117 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 2.4E-50 T 11-11-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS00650 17e6365c3d484712a0cbe1d3c6c74944 117 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 20 70 9.0E-13 T 11-11-2016 SHALO_RS00650 17e6365c3d484712a0cbe1d3c6c74944 117 Gene3D G3DSA:1.10.1900.20 55 116 9.9E-31 T 11-11-2016 SHALO_RS00650 17e6365c3d484712a0cbe1d3c6c74944 117 SUPERFAMILY SSF74731 3 115 1.57E-46 T 11-11-2016 SHALO_RS00650 17e6365c3d484712a0cbe1d3c6c74944 117 Pfam PF00453 Ribosomal protein L20 3 108 4.7E-46 T 11-11-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS00650 17e6365c3d484712a0cbe1d3c6c74944 117 PRINTS PR00062 Ribosomal protein L20 signature 75 101 4.8E-39 T 11-11-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS00650 17e6365c3d484712a0cbe1d3c6c74944 117 PRINTS PR00062 Ribosomal protein L20 signature 42 71 4.8E-39 T 11-11-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS00650 17e6365c3d484712a0cbe1d3c6c74944 117 PRINTS PR00062 Ribosomal protein L20 signature 12 41 4.8E-39 T 11-11-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS00650 17e6365c3d484712a0cbe1d3c6c74944 117 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 29.257 T 11-11-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS00650 17e6365c3d484712a0cbe1d3c6c74944 117 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 11-11-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS00150 06075fe7813c27ed5691eb3acf00e5e6 573 Gene3D G3DSA:3.30.450.20 182 286 3.0E-15 T 11-11-2016 SHALO_RS00150 06075fe7813c27ed5691eb3acf00e5e6 573 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 454 555 2.7E-8 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS00150 06075fe7813c27ed5691eb3acf00e5e6 573 SMART SM00387 451 568 1.7E-9 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS00150 06075fe7813c27ed5691eb3acf00e5e6 573 Gene3D G3DSA:3.30.565.10 410 564 2.6E-19 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS00150 06075fe7813c27ed5691eb3acf00e5e6 573 SUPERFAMILY SSF55874 407 564 7.2E-18 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS00150 06075fe7813c27ed5691eb3acf00e5e6 573 Gene3D G3DSA:3.30.450.20 87 181 2.1E-6 T 11-11-2016 SHALO_RS00150 06075fe7813c27ed5691eb3acf00e5e6 573 Pfam PF02743 Cache domain 66 276 3.2E-17 T 11-11-2016 IPR033479 Double Cache domain 1 SHALO_RS05995 54c967a8e3b4d2e2107f329d5e6bbf8e 124 Gene3D G3DSA:3.10.129.10 2 122 3.7E-35 T 11-11-2016 IPR029069 HotDog domain SHALO_RS05995 54c967a8e3b4d2e2107f329d5e6bbf8e 124 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 2 104 1.0E-26 T 11-11-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 SHALO_RS05995 54c967a8e3b4d2e2107f329d5e6bbf8e 124 Pfam PF03061 Thioesterase superfamily 13 93 9.6E-17 T 11-11-2016 IPR006683 Thioesterase domain Reactome: R-HSA-75105 SHALO_RS05995 54c967a8e3b4d2e2107f329d5e6bbf8e 124 ProSitePatterns PS01328 4-hydroxybenzoyl-CoA thioesterase family active site. 4 21 - T 11-11-2016 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site GO:0016787 SHALO_RS05995 54c967a8e3b4d2e2107f329d5e6bbf8e 124 SUPERFAMILY SSF54637 2 122 1.87E-29 T 11-11-2016 IPR029069 HotDog domain SHALO_RS05995 54c967a8e3b4d2e2107f329d5e6bbf8e 124 PIRSF PIRSF003230 1 124 8.8E-37 T 11-11-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 SHALO_RS13345 3bb8cd239e138439ebab302277bc664a 262 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHALO_RS13345 3bb8cd239e138439ebab302277bc664a 262 SUPERFAMILY SSF52540 5 222 8.8E-55 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS13345 3bb8cd239e138439ebab302277bc664a 262 SMART SM00382 28 233 1.4E-8 T 11-11-2016 IPR003593 AAA+ ATPase domain SHALO_RS13345 3bb8cd239e138439ebab302277bc664a 262 Gene3D G3DSA:3.40.50.300 6 225 3.2E-53 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS13345 3bb8cd239e138439ebab302277bc664a 262 Pfam PF00005 ABC transporter 19 167 1.1E-29 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_RS11425 0e1b30b7487dccb250983c08fccc7cb6 496 SUPERFAMILY SSF64158 79 296 1.03E-71 T 11-11-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SHALO_RS11425 0e1b30b7487dccb250983c08fccc7cb6 496 SUPERFAMILY SSF53649 302 490 5.5E-65 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 SHALO_RS11425 0e1b30b7487dccb250983c08fccc7cb6 496 SUPERFAMILY SSF53649 7 79 5.5E-65 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 SHALO_RS11425 0e1b30b7487dccb250983c08fccc7cb6 496 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 6 491 4.5E-191 T 11-11-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SHALO_RS11425 0e1b30b7487dccb250983c08fccc7cb6 496 Pfam PF01676 Metalloenzyme superfamily 7 483 2.6E-68 T 11-11-2016 IPR006124 Metalloenzyme GO:0003824|GO:0046872 SHALO_RS11425 0e1b30b7487dccb250983c08fccc7cb6 496 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 6 496 42.497 T 11-11-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SHALO_RS11425 0e1b30b7487dccb250983c08fccc7cb6 496 Gene3D G3DSA:3.40.720.10 302 490 1.4E-74 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 SHALO_RS11425 0e1b30b7487dccb250983c08fccc7cb6 496 Gene3D G3DSA:3.40.720.10 7 79 1.4E-74 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 SHALO_RS11425 0e1b30b7487dccb250983c08fccc7cb6 496 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 84 286 3.3E-64 T 11-11-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SHALO_RS11425 0e1b30b7487dccb250983c08fccc7cb6 496 PIRSF PIRSF001492 2 495 3.3E-180 T 11-11-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SHALO_RS11425 0e1b30b7487dccb250983c08fccc7cb6 496 Gene3D G3DSA:3.40.1450.10 80 297 2.4E-72 T 11-11-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SHALO_RS13280 e3e69fa846feaf0a361d8f394fb8776d 357 Pfam PF01594 Domain of unknown function DUF20 12 346 1.0E-34 T 11-11-2016 IPR002549 Transmembrane protein TqsA-like SHALO_RS01775 c7af958013e41998b5680bf481bfae53 212 Gene3D G3DSA:3.40.50.300 1 208 2.0E-53 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS01775 c7af958013e41998b5680bf481bfae53 212 Pfam PF00005 ABC transporter 17 158 2.5E-26 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_RS01775 c7af958013e41998b5680bf481bfae53 212 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHALO_RS01775 c7af958013e41998b5680bf481bfae53 212 SMART SM00382 26 205 3.8E-14 T 11-11-2016 IPR003593 AAA+ ATPase domain SHALO_RS01775 c7af958013e41998b5680bf481bfae53 212 SUPERFAMILY SSF52540 2 208 6.18E-51 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS03545 6a133cf92573c09a337ceed4e099a603 312 SUPERFAMILY SSF51395 12 310 8.06E-71 T 11-11-2016 SHALO_RS03545 6a133cf92573c09a337ceed4e099a603 312 Pfam PF01207 Dihydrouridine synthase (Dus) 14 299 1.6E-71 T 11-11-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 SHALO_RS03545 6a133cf92573c09a337ceed4e099a603 312 Gene3D G3DSA:1.10.1200.80 248 312 1.0E-19 T 11-11-2016 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 SHALO_RS03545 6a133cf92573c09a337ceed4e099a603 312 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 95 113 - T 11-11-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 SHALO_RS03545 6a133cf92573c09a337ceed4e099a603 312 PIRSF PIRSF006621 1 312 2.4E-82 T 11-11-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 SHALO_RS03545 6a133cf92573c09a337ceed4e099a603 312 Gene3D G3DSA:3.20.20.70 11 242 1.0E-68 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_RS09705 4212d4b4bb62f556a1057a08e8ee26b4 406 SMART SM00388 205 263 2.8E-9 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS09705 4212d4b4bb62f556a1057a08e8ee26b4 406 Pfam PF00512 His Kinase A (phospho-acceptor) domain 205 262 2.7E-8 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS09705 4212d4b4bb62f556a1057a08e8ee26b4 406 SUPERFAMILY SSF55874 253 399 3.41E-21 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS09705 4212d4b4bb62f556a1057a08e8ee26b4 406 Gene3D G3DSA:3.30.565.10 250 400 3.6E-22 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS09705 4212d4b4bb62f556a1057a08e8ee26b4 406 SUPERFAMILY SSF47384 189 262 5.3E-10 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS09705 4212d4b4bb62f556a1057a08e8ee26b4 406 Gene3D G3DSA:1.10.287.130 195 249 2.2E-11 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS09705 4212d4b4bb62f556a1057a08e8ee26b4 406 SMART SM00304 152 204 1.1E-4 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SHALO_RS09705 4212d4b4bb62f556a1057a08e8ee26b4 406 SUPERFAMILY SSF158472 154 201 4.45E-6 T 11-11-2016 SHALO_RS09705 4212d4b4bb62f556a1057a08e8ee26b4 406 Pfam PF00672 HAMP domain 141 200 5.7E-8 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SHALO_RS09705 4212d4b4bb62f556a1057a08e8ee26b4 406 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 309 395 4.4E-11 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS09705 4212d4b4bb62f556a1057a08e8ee26b4 406 SMART SM00387 305 406 8.4E-12 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS11760 55d093005ee90367e71bb59964051a83 465 SUPERFAMILY SSF88723 105 157 1.05E-6 T 11-11-2016 IPR029060 PIN domain-like SHALO_RS11760 55d093005ee90367e71bb59964051a83 465 SUPERFAMILY SSF88723 5 69 1.05E-6 T 11-11-2016 IPR029060 PIN domain-like SHALO_RS11760 55d093005ee90367e71bb59964051a83 465 Pfam PF13638 PIN domain 7 154 2.9E-22 T 11-11-2016 IPR002716 PIN domain SHALO_RS11760 55d093005ee90367e71bb59964051a83 465 Gene3D G3DSA:3.40.50.300 232 455 2.9E-37 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS11760 55d093005ee90367e71bb59964051a83 465 Pfam PF02562 PhoH-like protein 233 451 3.9E-47 T 11-11-2016 IPR003714 PhoH-like protein GO:0005524 SHALO_RS11760 55d093005ee90367e71bb59964051a83 465 SUPERFAMILY SSF52540 232 305 1.6E-19 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS11760 55d093005ee90367e71bb59964051a83 465 SUPERFAMILY SSF52540 360 434 1.6E-19 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS11760 55d093005ee90367e71bb59964051a83 465 Gene3D G3DSA:3.40.50.1010 105 158 6.6E-11 T 11-11-2016 IPR029060 PIN domain-like SHALO_RS11760 55d093005ee90367e71bb59964051a83 465 Gene3D G3DSA:3.40.50.1010 6 68 6.6E-11 T 11-11-2016 IPR029060 PIN domain-like SHALO_RS14490 36c57f4b06fef36a356aacf698f5a4fb 232 Gene3D G3DSA:3.30.70.20 166 229 5.9E-41 T 11-11-2016 SHALO_RS14490 36c57f4b06fef36a356aacf698f5a4fb 232 Gene3D G3DSA:3.30.70.20 4 66 5.9E-41 T 11-11-2016 SHALO_RS14490 36c57f4b06fef36a356aacf698f5a4fb 232 Pfam PF13247 4Fe-4S dicluster domain 160 195 7.6E-8 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_RS14490 36c57f4b06fef36a356aacf698f5a4fb 232 Pfam PF13247 4Fe-4S dicluster domain 51 113 1.2E-12 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_RS14490 36c57f4b06fef36a356aacf698f5a4fb 232 SUPERFAMILY SSF54862 162 229 3.03E-65 T 11-11-2016 SHALO_RS14490 36c57f4b06fef36a356aacf698f5a4fb 232 SUPERFAMILY SSF54862 3 112 3.03E-65 T 11-11-2016 SHALO_RS14490 36c57f4b06fef36a356aacf698f5a4fb 232 Gene3D G3DSA:3.30.70.20 67 112 3.0E-22 T 11-11-2016 SHALO_RS01055 5cadd79c3fbae5a43836755877454646 66 SUPERFAMILY SSF143800 1 64 1.41E-25 T 11-11-2016 SHALO_RS01055 5cadd79c3fbae5a43836755877454646 66 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 66 29.411 T 11-11-2016 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_RS01055 5cadd79c3fbae5a43836755877454646 66 PRINTS PR01249 Ribosomal protein L31 signature 2 19 5.1E-23 T 11-11-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_RS01055 5cadd79c3fbae5a43836755877454646 66 PRINTS PR01249 Ribosomal protein L31 signature 45 63 5.1E-23 T 11-11-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_RS01055 5cadd79c3fbae5a43836755877454646 66 PRINTS PR01249 Ribosomal protein L31 signature 30 45 5.1E-23 T 11-11-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_RS01055 5cadd79c3fbae5a43836755877454646 66 Pfam PF01197 Ribosomal protein L31 1 63 1.6E-31 T 11-11-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_RS01055 5cadd79c3fbae5a43836755877454646 66 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 65 3.1E-31 T 11-11-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_RS01055 5cadd79c3fbae5a43836755877454646 66 ProSitePatterns PS01143 Ribosomal protein L31 signature. 34 55 - T 11-11-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_RS10120 f8caf978cf841ce4f3545ef5c9a9060f 681 Gene3D G3DSA:3.40.50.300 538 619 3.1E-61 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS10120 f8caf978cf841ce4f3545ef5c9a9060f 681 Gene3D G3DSA:3.40.50.300 272 379 3.1E-61 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS10120 f8caf978cf841ce4f3545ef5c9a9060f 681 Pfam PF13361 UvrD-like helicase C-terminal domain 269 598 2.7E-71 T 11-11-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 SHALO_RS10120 f8caf978cf841ce4f3545ef5c9a9060f 681 Gene3D G3DSA:1.10.486.10 380 528 3.3E-37 T 11-11-2016 SHALO_RS10120 f8caf978cf841ce4f3545ef5c9a9060f 681 Pfam PF00580 UvrD/REP helicase N-terminal domain 7 116 5.2E-26 T 11-11-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 SHALO_RS10120 f8caf978cf841ce4f3545ef5c9a9060f 681 Pfam PF00580 UvrD/REP helicase N-terminal domain 124 264 2.2E-41 T 11-11-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 SHALO_RS10120 f8caf978cf841ce4f3545ef5c9a9060f 681 SUPERFAMILY SSF52540 6 618 4.47E-153 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS10120 f8caf978cf841ce4f3545ef5c9a9060f 681 Gene3D G3DSA:3.40.50.300 7 267 9.7E-76 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS13485 06cb6e43d80b4c7b7aa9df563c18f278 560 SUPERFAMILY SSF54862 153 262 1.93E-31 T 11-11-2016 SHALO_RS13485 06cb6e43d80b4c7b7aa9df563c18f278 560 SUPERFAMILY SSF54862 425 522 1.93E-31 T 11-11-2016 SHALO_RS13485 06cb6e43d80b4c7b7aa9df563c18f278 560 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 241 252 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_RS13485 06cb6e43d80b4c7b7aa9df563c18f278 560 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 458 469 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_RS13485 06cb6e43d80b4c7b7aa9df563c18f278 560 Pfam PF12838 4Fe-4S dicluster domain 213 255 1.0E-6 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_RS13485 06cb6e43d80b4c7b7aa9df563c18f278 560 Gene3D G3DSA:3.30.70.20 191 261 3.8E-13 T 11-11-2016 SHALO_RS13485 06cb6e43d80b4c7b7aa9df563c18f278 560 Gene3D G3DSA:3.30.70.20 414 481 4.0E-13 T 11-11-2016 SHALO_RS13485 06cb6e43d80b4c7b7aa9df563c18f278 560 Pfam PF13237 4Fe-4S dicluster domain 420 469 1.3E-5 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_RS05280 36cba500de52bf1dace429f0694c055d 296 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 3 82 2.5E-18 T 11-11-2016 IPR013589 Bacterial transglutaminase-like, N-terminal SHALO_RS05280 36cba500de52bf1dace429f0694c055d 296 SUPERFAMILY SSF54001 7 277 3.78E-37 T 11-11-2016 SHALO_RS05280 36cba500de52bf1dace429f0694c055d 296 Pfam PF01841 Transglutaminase-like superfamily 139 249 4.6E-18 T 11-11-2016 IPR002931 Transglutaminase-like SHALO_RS05280 36cba500de52bf1dace429f0694c055d 296 SMART SM00460 181 251 2.5E-11 T 11-11-2016 IPR002931 Transglutaminase-like SHALO_RS05280 36cba500de52bf1dace429f0694c055d 296 Gene3D G3DSA:3.90.260.10 182 256 1.0E-8 T 11-11-2016 IPR002931 Transglutaminase-like SHALO_RS14110 4bf663318e9e6e17314fde492cca3cf0 704 SUPERFAMILY SSF50249 619 703 6.71E-21 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold SHALO_RS14110 4bf663318e9e6e17314fde492cca3cf0 704 Pfam PF00575 S1 RNA binding domain 629 702 1.6E-16 T 11-11-2016 IPR003029 S1 domain GO:0003676 SHALO_RS14110 4bf663318e9e6e17314fde492cca3cf0 704 Gene3D G3DSA:2.40.50.140 625 703 1.4E-24 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold SHALO_RS14110 4bf663318e9e6e17314fde492cca3cf0 704 Pfam PF12836 Helix-hairpin-helix motif 480 544 1.5E-23 T 11-11-2016 SHALO_RS14110 4bf663318e9e6e17314fde492cca3cf0 704 Gene3D G3DSA:3.30.420.140 315 439 2.8E-47 T 11-11-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 SHALO_RS14110 4bf663318e9e6e17314fde492cca3cf0 704 Pfam PF16921 Tex protein YqgF-like domain 315 439 3.2E-50 T 11-11-2016 IPR032639 Tex protein, YqgF-like domain SHALO_RS14110 4bf663318e9e6e17314fde492cca3cf0 704 SUPERFAMILY SSF158832 2 310 2.22E-84 T 11-11-2016 SHALO_RS14110 4bf663318e9e6e17314fde492cca3cf0 704 SUPERFAMILY SSF47781 550 612 4.0E-13 T 11-11-2016 IPR010994 RuvA domain 2-like SHALO_RS14110 4bf663318e9e6e17314fde492cca3cf0 704 SMART SM00316 630 702 2.4E-21 T 11-11-2016 IPR022967 RNA-binding domain, S1 SHALO_RS14110 4bf663318e9e6e17314fde492cca3cf0 704 SMART SM00732 315 413 4.7E-31 T 11-11-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 SHALO_RS14110 4bf663318e9e6e17314fde492cca3cf0 704 Gene3D G3DSA:1.10.3500.10 440 486 8.8E-67 T 11-11-2016 IPR023323 Tex-like domain SHALO_RS14110 4bf663318e9e6e17314fde492cca3cf0 704 Gene3D G3DSA:1.10.3500.10 109 311 8.8E-67 T 11-11-2016 IPR023323 Tex-like domain SHALO_RS14110 4bf663318e9e6e17314fde492cca3cf0 704 SUPERFAMILY SSF47781 459 547 5.67E-23 T 11-11-2016 IPR010994 RuvA domain 2-like SHALO_RS14110 4bf663318e9e6e17314fde492cca3cf0 704 Pfam PF09371 Tex-like protein N-terminal domain 9 189 5.1E-55 T 11-11-2016 IPR018974 Tex-like protein, N-terminal SHALO_RS14110 4bf663318e9e6e17314fde492cca3cf0 704 SUPERFAMILY SSF53098 311 458 9.86E-45 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SHALO_RS14110 4bf663318e9e6e17314fde492cca3cf0 704 Gene3D G3DSA:1.10.150.310 488 611 1.2E-38 T 11-11-2016 IPR023097 Tex RuvX-like domain SHALO_RS14110 4bf663318e9e6e17314fde492cca3cf0 704 Gene3D G3DSA:1.10.10.650 4 108 5.1E-35 T 11-11-2016 IPR023319 Tex-like protein, HTH domain SHALO_RS04690 acb12ddabf5facf0ede9f93d5f7b4e1b 278 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 196 274 6.3E-28 T 11-11-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 SHALO_RS04690 acb12ddabf5facf0ede9f93d5f7b4e1b 278 SUPERFAMILY SSF46689 14 63 3.63E-10 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 SHALO_RS04690 acb12ddabf5facf0ede9f93d5f7b4e1b 278 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 194 273 1.3E-30 T 11-11-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 SHALO_RS04690 acb12ddabf5facf0ede9f93d5f7b4e1b 278 Gene3D G3DSA:3.30.160.70 110 182 1.9E-16 T 11-11-2016 SHALO_RS04690 acb12ddabf5facf0ede9f93d5f7b4e1b 278 Gene3D G3DSA:1.10.10.60 11 67 8.7E-17 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 SHALO_RS04690 acb12ddabf5facf0ede9f93d5f7b4e1b 278 SUPERFAMILY SSF53155 117 181 1.26E-10 T 11-11-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 SHALO_RS04690 acb12ddabf5facf0ede9f93d5f7b4e1b 278 SUPERFAMILY SSF46767 193 275 7.85E-29 T 11-11-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 SHALO_RS04690 acb12ddabf5facf0ede9f93d5f7b4e1b 278 Gene3D G3DSA:1.10.10.10 192 276 3.3E-30 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS04690 acb12ddabf5facf0ede9f93d5f7b4e1b 278 Gene3D G3DSA:1.10.10.60 68 109 1.2E-4 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 SHALO_RS04690 acb12ddabf5facf0ede9f93d5f7b4e1b 278 Pfam PF12833 Helix-turn-helix domain 36 111 1.1E-15 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SHALO_RS04690 acb12ddabf5facf0ede9f93d5f7b4e1b 278 SMART SM00342 29 111 2.3E-18 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SHALO_RS04690 acb12ddabf5facf0ede9f93d5f7b4e1b 278 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 244 250 - T 11-11-2016 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 SHALO_RS10820 f9c145cdd3fa2a4b5903bb056b56e3a7 188 Pfam PF04264 YceI-like domain 25 185 1.5E-40 T 11-11-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like SHALO_RS10820 f9c145cdd3fa2a4b5903bb056b56e3a7 188 SUPERFAMILY SSF101874 22 187 6.93E-48 T 11-11-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like SHALO_RS10820 f9c145cdd3fa2a4b5903bb056b56e3a7 188 Gene3D G3DSA:2.40.128.110 22 187 2.8E-51 T 11-11-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like SHALO_RS10820 f9c145cdd3fa2a4b5903bb056b56e3a7 188 SMART SM00867 22 186 1.3E-59 T 11-11-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like SHALO_RS14850 ec93cb6246fdf721424fd8de3e70c9e0 478 SUPERFAMILY SSF56634 3 477 3.4E-201 T 11-11-2016 IPR020835 Catalase-like domain GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 SHALO_RS14850 ec93cb6246fdf721424fd8de3e70c9e0 478 Pfam PF06628 Catalase-related immune-responsive 417 476 4.0E-21 T 11-11-2016 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 SHALO_RS14850 ec93cb6246fdf721424fd8de3e70c9e0 478 PRINTS PR00067 Catalase signature 105 122 3.8E-69 T 11-11-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 SHALO_RS14850 ec93cb6246fdf721424fd8de3e70c9e0 478 PRINTS PR00067 Catalase signature 289 316 3.8E-69 T 11-11-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 SHALO_RS14850 ec93cb6246fdf721424fd8de3e70c9e0 478 PRINTS PR00067 Catalase signature 124 142 3.8E-69 T 11-11-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 SHALO_RS14850 ec93cb6246fdf721424fd8de3e70c9e0 478 PRINTS PR00067 Catalase signature 22 45 3.8E-69 T 11-11-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 SHALO_RS14850 ec93cb6246fdf721424fd8de3e70c9e0 478 PRINTS PR00067 Catalase signature 84 102 3.8E-69 T 11-11-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 SHALO_RS14850 ec93cb6246fdf721424fd8de3e70c9e0 478 PRINTS PR00067 Catalase signature 321 347 3.8E-69 T 11-11-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 SHALO_RS14850 ec93cb6246fdf721424fd8de3e70c9e0 478 PIRSF PIRSF038928 1 478 1.7E-221 T 11-11-2016 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 SHALO_RS14850 ec93cb6246fdf721424fd8de3e70c9e0 478 SMART SM01060 9 392 5.5E-276 T 11-11-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 SHALO_RS14850 ec93cb6246fdf721424fd8de3e70c9e0 478 Gene3D G3DSA:2.40.180.10 3 358 1.2E-170 T 11-11-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 SHALO_RS14850 ec93cb6246fdf721424fd8de3e70c9e0 478 Pfam PF00199 Catalase 9 389 2.9E-183 T 11-11-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 SHALO_RS14850 ec93cb6246fdf721424fd8de3e70c9e0 478 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 334 342 - T 11-11-2016 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 SHALO_RS02225 6f94e4f1bcdb83e876a97e7ee7cf7543 256 Gene3D G3DSA:3.75.10.10 4 251 2.3E-65 T 11-11-2016 SHALO_RS02225 6f94e4f1bcdb83e876a97e7ee7cf7543 256 Pfam PF02274 Amidinotransferase 22 250 4.0E-21 T 11-11-2016 SHALO_RS02225 6f94e4f1bcdb83e876a97e7ee7cf7543 256 SUPERFAMILY SSF55909 21 251 2.75E-47 T 11-11-2016 SHALO_RS13370 d53e819ab911731db037ff1fb7a85381 225 Gene3D G3DSA:3.30.1150.10 112 224 6.5E-22 T 11-11-2016 SHALO_RS13370 d53e819ab911731db037ff1fb7a85381 225 SUPERFAMILY SSF74653 123 224 3.01E-20 T 11-11-2016 SHALO_RS13370 d53e819ab911731db037ff1fb7a85381 225 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 148 223 1.3E-15 T 11-11-2016 IPR006260 TonB, C-terminal GO:0006810 SHALO_RS13370 d53e819ab911731db037ff1fb7a85381 225 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 149 224 2.3E-17 T 11-11-2016 IPR006260 TonB, C-terminal GO:0006810 SHALO_RS05370 47ea279ead71fc9c7332cc4a68389b95 420 Pfam PF00464 Serine hydroxymethyltransferase 10 384 6.9E-165 T 11-11-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 SHALO_RS05370 47ea279ead71fc9c7332cc4a68389b95 420 PIRSF PIRSF000412 1 418 2.9E-167 T 11-11-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 SHALO_RS05370 47ea279ead71fc9c7332cc4a68389b95 420 Gene3D G3DSA:3.40.640.10 38 284 9.1E-98 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SHALO_RS05370 47ea279ead71fc9c7332cc4a68389b95 420 SUPERFAMILY SSF53383 4 416 5.25E-171 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase SHALO_RS05370 47ea279ead71fc9c7332cc4a68389b95 420 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 8 416 49.545 T 11-11-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 SHALO_RS05370 47ea279ead71fc9c7332cc4a68389b95 420 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 222 238 - T 11-11-2016 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0004372|GO:0006544|GO:0006563|GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 SHALO_RS05370 47ea279ead71fc9c7332cc4a68389b95 420 Gene3D G3DSA:3.90.1150.10 285 416 4.4E-47 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SHALO_RS04855 2ebed66301e11f7fe33fbc916293152f 743 Pfam PF00384 Molybdopterin oxidoreductase 100 530 2.6E-64 T 11-11-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS04855 2ebed66301e11f7fe33fbc916293152f 743 Gene3D G3DSA:2.20.25.90 40 97 4.6E-14 T 11-11-2016 SHALO_RS04855 2ebed66301e11f7fe33fbc916293152f 743 Gene3D G3DSA:2.40.40.20 609 742 2.9E-30 T 11-11-2016 SHALO_RS04855 2ebed66301e11f7fe33fbc916293152f 743 Gene3D G3DSA:3.90.55.10 476 541 3.9E-8 T 11-11-2016 SHALO_RS04855 2ebed66301e11f7fe33fbc916293152f 743 Gene3D G3DSA:3.40.50.740 373 475 1.8E-25 T 11-11-2016 SHALO_RS04855 2ebed66301e11f7fe33fbc916293152f 743 Gene3D G3DSA:3.40.50.740 98 180 1.8E-25 T 11-11-2016 SHALO_RS04855 2ebed66301e11f7fe33fbc916293152f 743 SMART SM00926 42 97 9.5E-11 T 11-11-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS04855 2ebed66301e11f7fe33fbc916293152f 743 SUPERFAMILY SSF50692 620 743 2.49E-30 T 11-11-2016 IPR009010 Aspartate decarboxylase-like domain SHALO_RS04855 2ebed66301e11f7fe33fbc916293152f 743 Pfam PF01568 Molydopterin dinucleotide binding domain 624 720 1.7E-23 T 11-11-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 SHALO_RS04855 2ebed66301e11f7fe33fbc916293152f 743 Gene3D G3DSA:3.40.228.10 181 372 5.4E-57 T 11-11-2016 SHALO_RS04855 2ebed66301e11f7fe33fbc916293152f 743 SUPERFAMILY SSF53706 44 624 4.58E-145 T 11-11-2016 SHALO_RS04855 2ebed66301e11f7fe33fbc916293152f 743 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 43 97 6.0E-8 T 11-11-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS05680 bc8e5a76d6f2d400bfb5f4c1908b02d1 79 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 77 3.8E-24 T 11-11-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 SHALO_RS05680 bc8e5a76d6f2d400bfb5f4c1908b02d1 79 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 79 14.353 T 11-11-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 SHALO_RS05680 bc8e5a76d6f2d400bfb5f4c1908b02d1 79 Gene3D G3DSA:3.30.1070.10 30 77 6.7E-10 T 11-11-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 SHALO_RS05680 bc8e5a76d6f2d400bfb5f4c1908b02d1 79 SUPERFAMILY SSF55229 32 77 3.14E-7 T 11-11-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 SHALO_RS05680 bc8e5a76d6f2d400bfb5f4c1908b02d1 79 Pfam PF03776 Septum formation topological specificity factor MinE 14 77 1.6E-18 T 11-11-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 SHALO_RS06515 370d4b97e579ac0b602e0eaaa81ea48d 115 TIGRFAM TIGR00100 hypA: hydrogenase nickel insertion protein HypA 1 113 1.8E-26 T 11-11-2016 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 SHALO_RS06515 370d4b97e579ac0b602e0eaaa81ea48d 115 Hamap MF_00213 Probable hydrogenase nickel incorporation protein HypA [hypA]. 1 113 21.681 T 11-11-2016 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 SHALO_RS06515 370d4b97e579ac0b602e0eaaa81ea48d 115 ProSitePatterns PS01249 Hydrogenases expression/synthesis hypA family signature. 34 76 - T 11-11-2016 IPR020538 Hydrogenase nickel incorporation protein HypA/HybF, conserved site SHALO_RS06515 370d4b97e579ac0b602e0eaaa81ea48d 115 PIRSF PIRSF004761 1 115 1.2E-31 T 11-11-2016 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 SHALO_RS06515 370d4b97e579ac0b602e0eaaa81ea48d 115 Pfam PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA 1 112 2.5E-29 T 11-11-2016 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 SHALO_RS02275 ad1656d3b15a32649053e4f1b0bd644c 134 SUPERFAMILY SSF110857 9 100 2.16E-6 T 11-11-2016 IPR013024 Butirosin biosynthesis, BtrG-like SHALO_RS02275 ad1656d3b15a32649053e4f1b0bd644c 134 Gene3D G3DSA:3.10.490.10 11 132 4.0E-11 T 11-11-2016 IPR013024 Butirosin biosynthesis, BtrG-like SHALO_RS01975 8034d380abb1d49ef9ef223e49e202aa 120 Pfam PF00893 Small Multidrug Resistance protein 1 110 2.0E-5 T 11-11-2016 IPR000390 Small multidrug resistance protein family GO:0016021 SHALO_RS01975 8034d380abb1d49ef9ef223e49e202aa 120 SUPERFAMILY SSF103481 47 119 1.44E-10 T 11-11-2016 SHALO_RS12725 b5020e828c25cf5e3236a70aa9903c5b 672 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 655 672 - T 11-11-2016 IPR010917 TonB-dependent receptor, conserved site SHALO_RS12725 b5020e828c25cf5e3236a70aa9903c5b 672 Gene3D G3DSA:2.170.130.10 13 145 1.7E-24 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SHALO_RS12725 b5020e828c25cf5e3236a70aa9903c5b 672 Pfam PF07715 TonB-dependent Receptor Plug Domain 34 136 3.0E-11 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SHALO_RS12725 b5020e828c25cf5e3236a70aa9903c5b 672 Pfam PF00593 TonB dependent receptor 435 671 8.6E-26 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SHALO_RS12725 b5020e828c25cf5e3236a70aa9903c5b 672 SUPERFAMILY SSF56935 14 672 5.8E-114 T 11-11-2016 SHALO_RS12725 b5020e828c25cf5e3236a70aa9903c5b 672 Gene3D G3DSA:2.40.170.20 146 672 4.2E-86 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SHALO_RS14890 bc8df0535297ee56baa7aec147aeaf55 301 SUPERFAMILY SSF103481 194 285 2.62E-6 T 11-11-2016 SHALO_RS14890 bc8df0535297ee56baa7aec147aeaf55 301 SUPERFAMILY SSF103481 40 140 1.2E-10 T 11-11-2016 SHALO_RS14890 bc8df0535297ee56baa7aec147aeaf55 301 Pfam PF00892 EamA-like transporter family 153 283 7.8E-13 T 11-11-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SHALO_RS14890 bc8df0535297ee56baa7aec147aeaf55 301 Pfam PF00892 EamA-like transporter family 6 137 5.0E-16 T 11-11-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SHALO_RS05240 5d143da62fce1186cc1e6af1ce462e83 653 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 238 392 2.9E-12 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS05240 5d143da62fce1186cc1e6af1ce462e83 653 Pfam PF16448 LapD/MoxY periplasmic domain 23 146 4.4E-39 T 11-11-2016 IPR032244 LapD/MoxY, periplasmic domain SHALO_RS05240 5d143da62fce1186cc1e6af1ce462e83 653 Pfam PF00563 EAL domain 416 649 3.1E-31 T 11-11-2016 IPR001633 EAL domain SHALO_RS05240 5d143da62fce1186cc1e6af1ce462e83 653 Gene3D G3DSA:3.30.70.270 239 397 6.0E-20 T 11-11-2016 SHALO_RS05240 5d143da62fce1186cc1e6af1ce462e83 653 SMART SM00052 410 652 1.4E-8 T 11-11-2016 IPR001633 EAL domain SHALO_RS05240 5d143da62fce1186cc1e6af1ce462e83 653 Gene3D G3DSA:3.20.20.450 414 649 2.7E-30 T 11-11-2016 IPR001633 EAL domain SHALO_RS05240 5d143da62fce1186cc1e6af1ce462e83 653 SUPERFAMILY SSF55073 243 391 6.04E-18 T 11-11-2016 IPR029787 Nucleotide cyclase SHALO_RS05240 5d143da62fce1186cc1e6af1ce462e83 653 SMART SM00267 226 398 1.6E-7 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS05240 5d143da62fce1186cc1e6af1ce462e83 653 Pfam PF00990 Diguanylate cyclase, GGDEF domain 238 391 2.7E-20 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS05240 5d143da62fce1186cc1e6af1ce462e83 653 SUPERFAMILY SSF141868 416 649 9.55E-36 T 11-11-2016 IPR001633 EAL domain SHALO_RS02445 7ba1f8b902eda7ac1c478e82b7746219 125 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 11-11-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_RS02445 7ba1f8b902eda7ac1c478e82b7746219 125 PIRSF PIRSF002133 1 124 2.0E-53 T 11-11-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_RS02445 7ba1f8b902eda7ac1c478e82b7746219 125 PRINTS PR01034 Ribosomal protein S12 signature 77 94 2.5E-57 T 11-11-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_RS02445 7ba1f8b902eda7ac1c478e82b7746219 125 PRINTS PR01034 Ribosomal protein S12 signature 27 42 2.5E-57 T 11-11-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_RS02445 7ba1f8b902eda7ac1c478e82b7746219 125 PRINTS PR01034 Ribosomal protein S12 signature 58 77 2.5E-57 T 11-11-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_RS02445 7ba1f8b902eda7ac1c478e82b7746219 125 PRINTS PR01034 Ribosomal protein S12 signature 110 122 2.5E-57 T 11-11-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_RS02445 7ba1f8b902eda7ac1c478e82b7746219 125 PRINTS PR01034 Ribosomal protein S12 signature 42 57 2.5E-57 T 11-11-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_RS02445 7ba1f8b902eda7ac1c478e82b7746219 125 PRINTS PR01034 Ribosomal protein S12 signature 94 110 2.5E-57 T 11-11-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_RS02445 7ba1f8b902eda7ac1c478e82b7746219 125 Gene3D G3DSA:2.40.50.140 2 123 5.8E-63 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold SHALO_RS02445 7ba1f8b902eda7ac1c478e82b7746219 125 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.472 T 11-11-2016 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS02445 7ba1f8b902eda7ac1c478e82b7746219 125 SUPERFAMILY SSF50249 2 123 2.06E-50 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold SHALO_RS02445 7ba1f8b902eda7ac1c478e82b7746219 125 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 2 124 1.5E-68 T 11-11-2016 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS02445 7ba1f8b902eda7ac1c478e82b7746219 125 Pfam PF00164 Ribosomal protein S12/S23 6 123 3.2E-41 T 11-11-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_RS11660 9b185389fa4cca444cfae40906ae5534 214 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 64 182 5.2E-8 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SHALO_RS11660 9b185389fa4cca444cfae40906ae5534 214 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 94 176 3.8E-6 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SHALO_RS11660 9b185389fa4cca444cfae40906ae5534 214 Gene3D G3DSA:1.10.150.240 17 71 3.0E-11 T 11-11-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 SHALO_RS11660 9b185389fa4cca444cfae40906ae5534 214 SUPERFAMILY SSF56784 2 209 3.07E-49 T 11-11-2016 IPR023214 HAD-like domain SHALO_RS11660 9b185389fa4cca444cfae40906ae5534 214 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 182 2.6E-39 T 11-11-2016 IPR023214 HAD-like domain SHALO_RS11660 9b185389fa4cca444cfae40906ae5534 214 Gene3D G3DSA:3.40.50.1000 72 210 3.2E-34 T 11-11-2016 IPR023214 HAD-like domain SHALO_RS01220 4f33b812d6bd2b81a301ca82eba984fa 214 SUPERFAMILY SSF69572 2 213 5.76E-39 T 11-11-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 SHALO_RS01220 4f33b812d6bd2b81a301ca82eba984fa 214 Gene3D G3DSA:3.40.50.720 2 213 1.2E-28 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS01220 4f33b812d6bd2b81a301ca82eba984fa 214 Pfam PF00899 ThiF family 6 129 1.7E-23 T 11-11-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 SHALO_RS15020 92205ca09b4df229a996e9c8e06845dc 385 Gene3D G3DSA:3.40.250.10 260 345 1.4E-16 T 11-11-2016 IPR001763 Rhodanese-like domain SHALO_RS15020 92205ca09b4df229a996e9c8e06845dc 385 Gene3D G3DSA:3.40.250.10 136 235 1.3E-18 T 11-11-2016 IPR001763 Rhodanese-like domain SHALO_RS15020 92205ca09b4df229a996e9c8e06845dc 385 SMART SM00450 129 228 1.4E-9 T 11-11-2016 IPR001763 Rhodanese-like domain SHALO_RS15020 92205ca09b4df229a996e9c8e06845dc 385 SMART SM00450 27 127 1.8E-13 T 11-11-2016 IPR001763 Rhodanese-like domain SHALO_RS15020 92205ca09b4df229a996e9c8e06845dc 385 SMART SM00450 260 357 6.1E-8 T 11-11-2016 IPR001763 Rhodanese-like domain SHALO_RS15020 92205ca09b4df229a996e9c8e06845dc 385 SUPERFAMILY SSF52821 258 339 3.14E-18 T 11-11-2016 IPR001763 Rhodanese-like domain SHALO_RS15020 92205ca09b4df229a996e9c8e06845dc 385 Gene3D G3DSA:3.40.250.10 37 129 1.6E-19 T 11-11-2016 IPR001763 Rhodanese-like domain SHALO_RS15020 92205ca09b4df229a996e9c8e06845dc 385 Pfam PF00581 Rhodanese-like domain 136 225 1.0E-10 T 11-11-2016 IPR001763 Rhodanese-like domain SHALO_RS15020 92205ca09b4df229a996e9c8e06845dc 385 Pfam PF00581 Rhodanese-like domain 264 338 1.6E-10 T 11-11-2016 IPR001763 Rhodanese-like domain SHALO_RS15020 92205ca09b4df229a996e9c8e06845dc 385 Pfam PF00581 Rhodanese-like domain 40 123 6.7E-11 T 11-11-2016 IPR001763 Rhodanese-like domain SHALO_RS15020 92205ca09b4df229a996e9c8e06845dc 385 SUPERFAMILY SSF52821 36 126 1.06E-17 T 11-11-2016 IPR001763 Rhodanese-like domain SHALO_RS15020 92205ca09b4df229a996e9c8e06845dc 385 SUPERFAMILY SSF52821 137 233 2.23E-19 T 11-11-2016 IPR001763 Rhodanese-like domain SHALO_RS15085 c7ee56c92586b7dbe927399fabcca321 798 Pfam PF12706 Beta-lactamase superfamily domain 40 214 9.4E-14 T 11-11-2016 IPR001279 Metallo-beta-lactamase SHALO_RS15085 c7ee56c92586b7dbe927399fabcca321 798 SMART SM00471 480 741 1.4E-6 T 11-11-2016 IPR003607 HD/PDEase domain SHALO_RS15085 c7ee56c92586b7dbe927399fabcca321 798 SUPERFAMILY SSF109604 656 770 6.91E-12 T 11-11-2016 SHALO_RS15085 c7ee56c92586b7dbe927399fabcca321 798 SMART SM00065 290 463 2.7E-14 T 11-11-2016 IPR003018 GAF domain GO:0005515 SHALO_RS15085 c7ee56c92586b7dbe927399fabcca321 798 Pfam PF13487 HD domain 658 723 1.9E-21 T 11-11-2016 SHALO_RS15085 c7ee56c92586b7dbe927399fabcca321 798 SUPERFAMILY SSF56281 5 257 4.06E-33 T 11-11-2016 IPR001279 Metallo-beta-lactamase SHALO_RS15085 c7ee56c92586b7dbe927399fabcca321 798 Gene3D G3DSA:1.10.3210.10 659 756 2.1E-4 T 11-11-2016 IPR006674 HD domain SHALO_RS15085 c7ee56c92586b7dbe927399fabcca321 798 Gene3D G3DSA:1.10.3210.10 478 552 7.0E-7 T 11-11-2016 IPR006674 HD domain SHALO_RS15085 c7ee56c92586b7dbe927399fabcca321 798 Gene3D G3DSA:3.60.15.10 6 259 3.4E-28 T 11-11-2016 IPR001279 Metallo-beta-lactamase SHALO_RS15085 c7ee56c92586b7dbe927399fabcca321 798 SUPERFAMILY SSF55781 273 464 1.35E-27 T 11-11-2016 IPR029016 GAF domain-like SHALO_RS15085 c7ee56c92586b7dbe927399fabcca321 798 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 49 67 1.1E-9 T 11-11-2016 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 SHALO_RS15085 c7ee56c92586b7dbe927399fabcca321 798 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 198 211 1.1E-9 T 11-11-2016 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 SHALO_RS15085 c7ee56c92586b7dbe927399fabcca321 798 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 81 102 1.1E-9 T 11-11-2016 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 SHALO_RS15085 c7ee56c92586b7dbe927399fabcca321 798 Pfam PF01590 GAF domain 290 453 1.6E-12 T 11-11-2016 IPR003018 GAF domain GO:0005515 SHALO_RS15085 c7ee56c92586b7dbe927399fabcca321 798 SUPERFAMILY SSF109604 470 574 1.41E-9 T 11-11-2016 SHALO_RS15085 c7ee56c92586b7dbe927399fabcca321 798 Pfam PF01966 HD domain 485 567 1.4E-4 T 11-11-2016 IPR006674 HD domain SHALO_RS15085 c7ee56c92586b7dbe927399fabcca321 798 SMART SM00849 18 191 0.0084 T 11-11-2016 IPR001279 Metallo-beta-lactamase SHALO_RS15085 c7ee56c92586b7dbe927399fabcca321 798 Gene3D G3DSA:3.30.450.40 270 464 2.3E-36 T 11-11-2016 IPR029016 GAF domain-like SHALO_RS09545 1b0b8ffdc9d243f635110e73705a31b8 280 Gene3D G3DSA:3.30.70.260 3 69 1.5E-11 T 11-11-2016 SHALO_RS09545 1b0b8ffdc9d243f635110e73705a31b8 280 Gene3D G3DSA:3.40.50.170 87 279 2.5E-53 T 11-11-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SHALO_RS09545 1b0b8ffdc9d243f635110e73705a31b8 280 SUPERFAMILY SSF53328 87 280 6.41E-57 T 11-11-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SHALO_RS09545 1b0b8ffdc9d243f635110e73705a31b8 280 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 4 280 42.5 T 11-11-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 SHALO_RS09545 1b0b8ffdc9d243f635110e73705a31b8 280 Pfam PF00551 Formyl transferase 87 262 1.1E-45 T 11-11-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SHALO_RS09545 1b0b8ffdc9d243f635110e73705a31b8 280 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 8 280 2.7E-111 T 11-11-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 SHALO_RS09545 1b0b8ffdc9d243f635110e73705a31b8 280 PIRSF PIRSF036480 4 280 2.7E-108 T 11-11-2016 SHALO_RS09545 1b0b8ffdc9d243f635110e73705a31b8 280 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 232 254 6.7E-51 T 11-11-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 SHALO_RS09545 1b0b8ffdc9d243f635110e73705a31b8 280 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 254 279 6.7E-51 T 11-11-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 SHALO_RS09545 1b0b8ffdc9d243f635110e73705a31b8 280 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 9 35 6.7E-51 T 11-11-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 SHALO_RS09545 1b0b8ffdc9d243f635110e73705a31b8 280 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 86 108 6.7E-51 T 11-11-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 SHALO_RS09545 1b0b8ffdc9d243f635110e73705a31b8 280 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 108 135 6.7E-51 T 11-11-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 SHALO_RS09545 1b0b8ffdc9d243f635110e73705a31b8 280 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 41 53 6.7E-51 T 11-11-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 SHALO_RS09545 1b0b8ffdc9d243f635110e73705a31b8 280 SUPERFAMILY SSF55021 6 70 9.16E-8 T 11-11-2016 SHALO_RS01920 afd9c8038e624e773844ae36e7170ee9 426 SMART SM00382 217 375 1.4E-6 T 11-11-2016 IPR003593 AAA+ ATPase domain SHALO_RS01920 afd9c8038e624e773844ae36e7170ee9 426 Pfam PF00448 SRP54-type protein, GTPase domain 219 411 1.0E-40 T 11-11-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 SHALO_RS01920 afd9c8038e624e773844ae36e7170ee9 426 SUPERFAMILY SSF52540 215 412 7.17E-35 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS01920 afd9c8038e624e773844ae36e7170ee9 426 Gene3D G3DSA:3.40.50.300 215 412 4.7E-46 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS01920 afd9c8038e624e773844ae36e7170ee9 426 SMART SM00962 218 412 1.2E-61 T 11-11-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 SHALO_RS01920 afd9c8038e624e773844ae36e7170ee9 426 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 2 307 6.3E-70 T 11-11-2016 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 SHALO_RS12155 2d1a6b9a1af759dc38e79a4ee7c9e369 178 PRINTS PR00059 Ribosomal protein L6 signature 71 96 5.6E-32 T 11-11-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 SHALO_RS12155 2d1a6b9a1af759dc38e79a4ee7c9e369 178 PRINTS PR00059 Ribosomal protein L6 signature 99 115 5.6E-32 T 11-11-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 SHALO_RS12155 2d1a6b9a1af759dc38e79a4ee7c9e369 178 PRINTS PR00059 Ribosomal protein L6 signature 140 161 5.6E-32 T 11-11-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 SHALO_RS12155 2d1a6b9a1af759dc38e79a4ee7c9e369 178 SUPERFAMILY SSF56053 2 82 1.85E-16 T 11-11-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_RS12155 2d1a6b9a1af759dc38e79a4ee7c9e369 178 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 153 161 - T 11-11-2016 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_RS12155 2d1a6b9a1af759dc38e79a4ee7c9e369 178 Pfam PF00347 Ribosomal protein L6 11 82 5.0E-8 T 11-11-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_RS12155 2d1a6b9a1af759dc38e79a4ee7c9e369 178 Pfam PF00347 Ribosomal protein L6 91 163 6.0E-21 T 11-11-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_RS12155 2d1a6b9a1af759dc38e79a4ee7c9e369 178 PIRSF PIRSF002162 1 176 1.9E-41 T 11-11-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_RS12155 2d1a6b9a1af759dc38e79a4ee7c9e369 178 Gene3D G3DSA:3.90.930.12 83 176 6.2E-37 T 11-11-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_RS12155 2d1a6b9a1af759dc38e79a4ee7c9e369 178 SUPERFAMILY SSF56053 83 175 1.24E-33 T 11-11-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_RS12155 2d1a6b9a1af759dc38e79a4ee7c9e369 178 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 175 33.49 T 11-11-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 SHALO_RS12155 2d1a6b9a1af759dc38e79a4ee7c9e369 178 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 175 2.6E-65 T 11-11-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 SHALO_RS12155 2d1a6b9a1af759dc38e79a4ee7c9e369 178 Gene3D G3DSA:3.90.930.12 2 82 1.7E-19 T 11-11-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_RS09460 23e6dc268035f37b48ebba437d5c0ab9 206 Pfam PF01810 LysE type translocator 18 203 6.0E-36 T 11-11-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 SHALO_RS09460 23e6dc268035f37b48ebba437d5c0ab9 206 PIRSF PIRSF006324 1 206 2.4E-59 T 11-11-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 SHALO_RS12315 1c6a6265e19bb4b2eeacbf2f5b078eb2 143 Gene3D G3DSA:3.30.420.10 2 138 2.4E-43 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SHALO_RS12315 1c6a6265e19bb4b2eeacbf2f5b078eb2 143 Pfam PF00075 RNase H 2 135 3.7E-38 T 11-11-2016 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 SHALO_RS12315 1c6a6265e19bb4b2eeacbf2f5b078eb2 143 SUPERFAMILY SSF53098 1 136 2.53E-42 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SHALO_RS11330 5fb9a99ff91a8dad7bef138f1221b7b9 202 PIRSF PIRSF000498 1 199 3.9E-60 T 11-11-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 SHALO_RS11330 5fb9a99ff91a8dad7bef138f1221b7b9 202 SUPERFAMILY SSF63380 1 81 1.36E-12 T 11-11-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 SHALO_RS11330 5fb9a99ff91a8dad7bef138f1221b7b9 202 Gene3D G3DSA:2.40.30.20 28 92 3.7E-16 T 11-11-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210 SHALO_RS11330 5fb9a99ff91a8dad7bef138f1221b7b9 202 Pfam PF00677 Lumazine binding domain 90 174 1.4E-21 T 11-11-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 SHALO_RS11330 5fb9a99ff91a8dad7bef138f1221b7b9 202 Pfam PF00677 Lumazine binding domain 3 69 6.1E-10 T 11-11-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 SHALO_RS11330 5fb9a99ff91a8dad7bef138f1221b7b9 202 Gene3D G3DSA:2.40.30.20 93 175 4.9E-30 T 11-11-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210 SHALO_RS11330 5fb9a99ff91a8dad7bef138f1221b7b9 202 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 187 9.5E-58 T 11-11-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 SHALO_RS11330 5fb9a99ff91a8dad7bef138f1221b7b9 202 SUPERFAMILY SSF63380 83 185 2.47E-31 T 11-11-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 SHALO_RS04570 813490a99ad1a04acc1917bff5275878 220 SUPERFAMILY SSF51206 9 142 1.57E-23 T 11-11-2016 IPR018490 Cyclic nucleotide-binding-like SHALO_RS04570 813490a99ad1a04acc1917bff5275878 220 Pfam PF13545 Crp-like helix-turn-helix domain 156 218 1.2E-10 T 11-11-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 SHALO_RS04570 813490a99ad1a04acc1917bff5275878 220 Gene3D G3DSA:1.10.10.10 170 219 3.6E-11 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS04570 813490a99ad1a04acc1917bff5275878 220 Pfam PF00027 Cyclic nucleotide-binding domain 33 120 1.2E-8 T 11-11-2016 IPR000595 Cyclic nucleotide-binding domain SHALO_RS04570 813490a99ad1a04acc1917bff5275878 220 SUPERFAMILY SSF46785 155 219 1.6E-11 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS04570 813490a99ad1a04acc1917bff5275878 220 Gene3D G3DSA:2.60.120.10 11 142 2.9E-21 T 11-11-2016 IPR014710 RmlC-like jelly roll fold SHALO_RS03635 ca8ba1c98d02f8b7d23e6367b9b8a360 428 Pfam PF00375 Sodium:dicarboxylate symporter family 8 403 3.6E-93 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 SHALO_RS03635 ca8ba1c98d02f8b7d23e6367b9b8a360 428 SUPERFAMILY SSF118215 8 403 2.75E-91 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 SHALO_RS03635 ca8ba1c98d02f8b7d23e6367b9b8a360 428 Gene3D G3DSA:1.10.3860.10 6 408 2.7E-89 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 SHALO_RS03635 ca8ba1c98d02f8b7d23e6367b9b8a360 428 PRINTS PR00173 Glutamate-aspartate symporter signature 193 212 7.0E-18 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 SHALO_RS03635 ca8ba1c98d02f8b7d23e6367b9b8a360 428 PRINTS PR00173 Glutamate-aspartate symporter signature 328 347 7.0E-18 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 SHALO_RS03635 ca8ba1c98d02f8b7d23e6367b9b8a360 428 PRINTS PR00173 Glutamate-aspartate symporter signature 6 26 7.0E-18 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 SHALO_RS03635 ca8ba1c98d02f8b7d23e6367b9b8a360 428 PRINTS PR00173 Glutamate-aspartate symporter signature 293 319 7.0E-18 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 SHALO_RS03635 ca8ba1c98d02f8b7d23e6367b9b8a360 428 PRINTS PR00173 Glutamate-aspartate symporter signature 145 167 7.0E-18 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 SHALO_RS03635 ca8ba1c98d02f8b7d23e6367b9b8a360 428 PRINTS PR00173 Glutamate-aspartate symporter signature 73 98 7.0E-18 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 SHALO_RS02420 76d103a6513c666460c42454f72a2c55 234 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 140 - T 11-11-2016 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_RS02420 76d103a6513c666460c42454f72a2c55 234 PIRSF PIRSF002155 1 228 5.7E-80 T 11-11-2016 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_RS02420 76d103a6513c666460c42454f72a2c55 234 Pfam PF00687 Ribosomal protein L1p/L10e family 32 221 3.3E-57 T 11-11-2016 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein SHALO_RS02420 76d103a6513c666460c42454f72a2c55 234 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 4 229 2.5E-103 T 11-11-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 SHALO_RS02420 76d103a6513c666460c42454f72a2c55 234 SUPERFAMILY SSF56808 7 225 4.71E-82 T 11-11-2016 IPR023674 Ribosomal protein L1-like SHALO_RS02420 76d103a6513c666460c42454f72a2c55 234 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 3 230 42.77 T 11-11-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 SHALO_RS02420 76d103a6513c666460c42454f72a2c55 234 Gene3D G3DSA:3.40.50.790 70 160 3.8E-41 T 11-11-2016 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich SHALO_RS02420 76d103a6513c666460c42454f72a2c55 234 Gene3D G3DSA:3.30.190.20 162 226 1.8E-45 T 11-11-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 SHALO_RS02420 76d103a6513c666460c42454f72a2c55 234 Gene3D G3DSA:3.30.190.20 18 69 1.8E-45 T 11-11-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 SHALO_RS13810 1a8b8af70a3ee8b87454d55cb01c055b 897 PRINTS PR00344 Bacterial sensor protein C-terminal signature 841 851 7.9E-6 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS13810 1a8b8af70a3ee8b87454d55cb01c055b 897 PRINTS PR00344 Bacterial sensor protein C-terminal signature 857 875 7.9E-6 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS13810 1a8b8af70a3ee8b87454d55cb01c055b 897 Gene3D G3DSA:3.30.565.10 744 896 2.0E-30 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS13810 1a8b8af70a3ee8b87454d55cb01c055b 897 SUPERFAMILY SSF55874 731 893 1.05E-30 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS13810 1a8b8af70a3ee8b87454d55cb01c055b 897 Pfam PF00512 His Kinase A (phospho-acceptor) domain 680 741 1.2E-11 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS13810 1a8b8af70a3ee8b87454d55cb01c055b 897 Gene3D G3DSA:1.20.120.620 393 492 4.7E-21 T 11-11-2016 SHALO_RS13810 1a8b8af70a3ee8b87454d55cb01c055b 897 SUPERFAMILY SSF52402 250 357 2.51E-10 T 11-11-2016 SHALO_RS13810 1a8b8af70a3ee8b87454d55cb01c055b 897 Gene3D G3DSA:3.30.450.40 498 665 4.5E-5 T 11-11-2016 IPR029016 GAF domain-like SHALO_RS13810 1a8b8af70a3ee8b87454d55cb01c055b 897 SUPERFAMILY SSF47384 671 743 2.16E-14 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS13810 1a8b8af70a3ee8b87454d55cb01c055b 897 Pfam PF13493 Domain of unknown function (DUF4118) 398 492 1.0E-20 T 11-11-2016 IPR025201 Sensor protein KdpD, transmembrane domain SHALO_RS13810 1a8b8af70a3ee8b87454d55cb01c055b 897 Gene3D G3DSA:1.10.287.130 672 738 3.7E-14 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS13810 1a8b8af70a3ee8b87454d55cb01c055b 897 Gene3D G3DSA:3.40.50.620 244 354 6.1E-11 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHALO_RS13810 1a8b8af70a3ee8b87454d55cb01c055b 897 SMART SM00387 786 896 1.4E-22 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS13810 1a8b8af70a3ee8b87454d55cb01c055b 897 Gene3D G3DSA:3.40.50.300 21 228 4.2E-90 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS13810 1a8b8af70a3ee8b87454d55cb01c055b 897 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 791 883 3.7E-13 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS13810 1a8b8af70a3ee8b87454d55cb01c055b 897 SUPERFAMILY SSF52540 19 145 2.54E-8 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS13810 1a8b8af70a3ee8b87454d55cb01c055b 897 Pfam PF02702 Osmosensitive K+ channel His kinase sensor domain 22 230 1.1E-87 T 11-11-2016 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal GO:0000155|GO:0000160|GO:0004673|GO:0016020 SHALO_RS13810 1a8b8af70a3ee8b87454d55cb01c055b 897 Pfam PF00582 Universal stress protein family 250 296 1.3E-4 T 11-11-2016 IPR006016 UspA GO:0006950 SHALO_RS13810 1a8b8af70a3ee8b87454d55cb01c055b 897 SMART SM00388 675 742 7.9E-13 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS06050 cea24414ead499d8936236500f52265e 140 SUPERFAMILY SSF52172 9 123 2.28E-30 T 11-11-2016 IPR011006 CheY-like superfamily SHALO_RS06050 cea24414ead499d8936236500f52265e 140 Gene3D G3DSA:3.40.50.2300 9 123 5.1E-30 T 11-11-2016 SHALO_RS06050 cea24414ead499d8936236500f52265e 140 Pfam PF00072 Response regulator receiver domain 12 120 1.1E-23 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS06050 cea24414ead499d8936236500f52265e 140 SMART SM00448 9 120 6.1E-26 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS07155 f9cb8f6051bb65984bb75fc524cb1f4c 389 PIRSF PIRSF001554 1 389 7.4E-152 T 11-11-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 SHALO_RS07155 f9cb8f6051bb65984bb75fc524cb1f4c 389 SUPERFAMILY SSF52210 240 386 3.92E-48 T 11-11-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 SHALO_RS07155 f9cb8f6051bb65984bb75fc524cb1f4c 389 Gene3D G3DSA:3.40.50.261 241 384 2.8E-58 T 11-11-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 SHALO_RS07155 f9cb8f6051bb65984bb75fc524cb1f4c 389 SUPERFAMILY SSF56059 1 238 2.05E-82 T 11-11-2016 SHALO_RS07155 f9cb8f6051bb65984bb75fc524cb1f4c 389 Pfam PF08442 ATP-grasp domain 2 202 3.0E-80 T 11-11-2016 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 SHALO_RS07155 f9cb8f6051bb65984bb75fc524cb1f4c 389 Gene3D G3DSA:3.30.470.20 96 238 6.8E-58 T 11-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SHALO_RS07155 f9cb8f6051bb65984bb75fc524cb1f4c 389 Pfam PF00549 CoA-ligase 262 372 5.7E-20 T 11-11-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 SHALO_RS07155 f9cb8f6051bb65984bb75fc524cb1f4c 389 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 386 1.7E-156 T 11-11-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 SHALO_RS07155 f9cb8f6051bb65984bb75fc524cb1f4c 389 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 281 - T 11-11-2016 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 SHALO_RS07155 f9cb8f6051bb65984bb75fc524cb1f4c 389 Gene3D G3DSA:3.30.1490.20 22 95 7.6E-35 T 11-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SHALO_RS07155 f9cb8f6051bb65984bb75fc524cb1f4c 389 Hamap MF_00558 Succinyl-CoA ligase [ADP-forming] subunit beta [sucC]. 1 387 42.217 T 11-11-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 SHALO_RS10555 7a581232f87b4c3671fc4292e819ded8 349 Gene3D G3DSA:1.10.3210.10 143 327 2.0E-23 T 11-11-2016 IPR006674 HD domain SHALO_RS10555 7a581232f87b4c3671fc4292e819ded8 349 SUPERFAMILY SSF109604 141 326 3.45E-41 T 11-11-2016 SHALO_RS10555 7a581232f87b4c3671fc4292e819ded8 349 SMART SM00448 2 115 3.9E-36 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS10555 7a581232f87b4c3671fc4292e819ded8 349 SUPERFAMILY SSF52172 2 137 1.24E-37 T 11-11-2016 IPR011006 CheY-like superfamily SHALO_RS10555 7a581232f87b4c3671fc4292e819ded8 349 Pfam PF00072 Response regulator receiver domain 4 115 7.4E-26 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS10555 7a581232f87b4c3671fc4292e819ded8 349 Pfam PF01966 HD domain 162 284 6.0E-16 T 11-11-2016 IPR006674 HD domain SHALO_RS10555 7a581232f87b4c3671fc4292e819ded8 349 SMART SM00471 157 294 1.1E-9 T 11-11-2016 IPR003607 HD/PDEase domain SHALO_RS10555 7a581232f87b4c3671fc4292e819ded8 349 Gene3D G3DSA:3.40.50.2300 3 130 2.0E-40 T 11-11-2016 SHALO_RS11295 35e44290b4fe30e52d84fdbc21fd44bc 807 Pfam PF00702 haloacid dehalogenase-like hydrolase 504 710 1.1E-29 T 11-11-2016 SHALO_RS11295 35e44290b4fe30e52d84fdbc21fd44bc 807 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 228 801 3.2E-142 T 11-11-2016 SHALO_RS11295 35e44290b4fe30e52d84fdbc21fd44bc 807 PRINTS PR00943 Copper-transporting ATPase signature 732 746 2.9E-5 T 11-11-2016 SHALO_RS11295 35e44290b4fe30e52d84fdbc21fd44bc 807 PRINTS PR00943 Copper-transporting ATPase signature 490 505 2.9E-5 T 11-11-2016 SHALO_RS11295 35e44290b4fe30e52d84fdbc21fd44bc 807 PRINTS PR00943 Copper-transporting ATPase signature 675 692 2.9E-5 T 11-11-2016 SHALO_RS11295 35e44290b4fe30e52d84fdbc21fd44bc 807 PRINTS PR00943 Copper-transporting ATPase signature 277 296 2.9E-5 T 11-11-2016 SHALO_RS11295 35e44290b4fe30e52d84fdbc21fd44bc 807 PRINTS PR00943 Copper-transporting ATPase signature 136 156 2.9E-5 T 11-11-2016 SHALO_RS11295 35e44290b4fe30e52d84fdbc21fd44bc 807 SUPERFAMILY SSF55008 88 162 8.64E-19 T 11-11-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SHALO_RS11295 35e44290b4fe30e52d84fdbc21fd44bc 807 SUPERFAMILY SSF81653 310 406 5.89E-17 T 11-11-2016 SHALO_RS11295 35e44290b4fe30e52d84fdbc21fd44bc 807 Pfam PF00122 E1-E2 ATPase 279 498 2.2E-56 T 11-11-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 SHALO_RS11295 35e44290b4fe30e52d84fdbc21fd44bc 807 Gene3D G3DSA:2.70.150.10 257 408 1.9E-21 T 11-11-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 SHALO_RS11295 35e44290b4fe30e52d84fdbc21fd44bc 807 SUPERFAMILY SSF56784 505 525 4.71E-48 T 11-11-2016 IPR023214 HAD-like domain SHALO_RS11295 35e44290b4fe30e52d84fdbc21fd44bc 807 SUPERFAMILY SSF56784 562 798 4.71E-48 T 11-11-2016 IPR023214 HAD-like domain SHALO_RS11295 35e44290b4fe30e52d84fdbc21fd44bc 807 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 698 717 2.2E-18 T 11-11-2016 SHALO_RS11295 35e44290b4fe30e52d84fdbc21fd44bc 807 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 721 733 2.2E-18 T 11-11-2016 SHALO_RS11295 35e44290b4fe30e52d84fdbc21fd44bc 807 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 645 655 2.2E-18 T 11-11-2016 SHALO_RS11295 35e44290b4fe30e52d84fdbc21fd44bc 807 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 357 371 2.2E-18 T 11-11-2016 SHALO_RS11295 35e44290b4fe30e52d84fdbc21fd44bc 807 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 507 521 2.2E-18 T 11-11-2016 SHALO_RS11295 35e44290b4fe30e52d84fdbc21fd44bc 807 SUPERFAMILY SSF81665 408 501 1.83E-14 T 11-11-2016 SHALO_RS11295 35e44290b4fe30e52d84fdbc21fd44bc 807 SUPERFAMILY SSF81665 276 311 1.83E-14 T 11-11-2016 SHALO_RS11295 35e44290b4fe30e52d84fdbc21fd44bc 807 SUPERFAMILY SSF81665 747 782 1.83E-14 T 11-11-2016 SHALO_RS11295 35e44290b4fe30e52d84fdbc21fd44bc 807 Pfam PF00403 Heavy-metal-associated domain 96 154 6.0E-12 T 11-11-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SHALO_RS11295 35e44290b4fe30e52d84fdbc21fd44bc 807 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 509 515 - T 11-11-2016 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 SHALO_RS11295 35e44290b4fe30e52d84fdbc21fd44bc 807 Gene3D G3DSA:3.30.70.100 90 160 2.4E-17 T 11-11-2016 SHALO_RS11295 35e44290b4fe30e52d84fdbc21fd44bc 807 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 279 782 7.9E-79 T 11-11-2016 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 SHALO_RS11295 35e44290b4fe30e52d84fdbc21fd44bc 807 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 246 799 2.7E-150 T 11-11-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 SHALO_RS11295 35e44290b4fe30e52d84fdbc21fd44bc 807 Pfam PF12156 Putative metal-binding domain of cation transport ATPase 5 86 9.8E-19 T 11-11-2016 IPR021993 Putative metal-binding domain of cation transport ATPase SHALO_RS11295 35e44290b4fe30e52d84fdbc21fd44bc 807 Gene3D G3DSA:3.40.50.1000 618 766 3.6E-41 T 11-11-2016 IPR023214 HAD-like domain SHALO_RS11295 35e44290b4fe30e52d84fdbc21fd44bc 807 Gene3D G3DSA:3.40.50.1000 479 523 3.6E-41 T 11-11-2016 IPR023214 HAD-like domain SHALO_RS06365 a069941b97825315bdd591fe1e59bb0b 224 SUPERFAMILY SSF52172 8 187 1.28E-33 T 11-11-2016 IPR011006 CheY-like superfamily SHALO_RS06365 a069941b97825315bdd591fe1e59bb0b 224 Pfam PF00072 Response regulator receiver domain 11 120 5.9E-23 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS06365 a069941b97825315bdd591fe1e59bb0b 224 Gene3D G3DSA:1.10.10.10 157 224 9.9E-17 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS06365 a069941b97825315bdd591fe1e59bb0b 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 154 223 4.0E-13 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS06365 a069941b97825315bdd591fe1e59bb0b 224 SMART SM00448 9 120 1.4E-25 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS06365 a069941b97825315bdd591fe1e59bb0b 224 Gene3D G3DSA:3.40.50.2300 8 156 2.1E-32 T 11-11-2016 SHALO_RS06365 a069941b97825315bdd591fe1e59bb0b 224 SMART SM00862 153 223 3.7E-13 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS10575 50cd0838c91438b20907f16ff14e594a 354 TIGRFAM TIGR00423 TIGR00423: radical SAM domain protein, CofH subfamily 45 351 1.0E-115 T 11-11-2016 IPR020050 FO synthase, subunit 2 GO:0016765 KEGG: 00680+2.5.1.77|MetaCyc: PWY-5198 SHALO_RS10575 50cd0838c91438b20907f16ff14e594a 354 Hamap MF_00993 Aminodeoxyfutalosine synthase [mqnE]. 1 354 48.752 T 11-11-2016 IPR022432 Aminodeoxyfutalosine synthase GO:0009234 KEGG: 00130+2.5.1.120|MetaCyc: PWY-7371|MetaCyc: PWY-7374 SHALO_RS10575 50cd0838c91438b20907f16ff14e594a 354 SMART SM00729 49 267 0.0029 T 11-11-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 SHALO_RS10575 50cd0838c91438b20907f16ff14e594a 354 TIGRFAM TIGR03700 mena_SCO4494: putative menaquinone biosynthesis radical SAM enzyme, SCO4494 family 4 351 3.6E-146 T 11-11-2016 IPR022432 Aminodeoxyfutalosine synthase GO:0009234 KEGG: 00130+2.5.1.120|MetaCyc: PWY-7371|MetaCyc: PWY-7374 SHALO_RS10575 50cd0838c91438b20907f16ff14e594a 354 SUPERFAMILY SSF102114 13 305 5.49E-43 T 11-11-2016 SHALO_RS10575 50cd0838c91438b20907f16ff14e594a 354 Gene3D G3DSA:3.20.20.70 12 340 2.7E-53 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_RS10575 50cd0838c91438b20907f16ff14e594a 354 PIRSF PIRSF004762 2 354 7.4E-100 T 11-11-2016 IPR005244 FO synthase, subunit 2-like GO:0016765|GO:0051188|GO:0051539 KEGG: 00680+2.5.1.77|MetaCyc: PWY-5198 SHALO_RS10575 50cd0838c91438b20907f16ff14e594a 354 Pfam PF04055 Radical SAM superfamily 53 224 6.3E-16 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SHALO_RS02895 efdc706d8dbe229fc7f191ae32a2cfba 399 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 14 24 - T 11-11-2016 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SHALO_RS02895 efdc706d8dbe229fc7f191ae32a2cfba 399 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 7 395 39.478 T 11-11-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SHALO_RS02895 efdc706d8dbe229fc7f191ae32a2cfba 399 SUPERFAMILY SSF53748 3 395 1.65E-145 T 11-11-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SHALO_RS02895 efdc706d8dbe229fc7f191ae32a2cfba 399 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 2.6E-86 T 11-11-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SHALO_RS02895 efdc706d8dbe229fc7f191ae32a2cfba 399 PRINTS PR00477 Phosphoglycerate kinase family signature 315 340 2.6E-86 T 11-11-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SHALO_RS02895 efdc706d8dbe229fc7f191ae32a2cfba 399 PRINTS PR00477 Phosphoglycerate kinase family signature 371 388 2.6E-86 T 11-11-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SHALO_RS02895 efdc706d8dbe229fc7f191ae32a2cfba 399 PRINTS PR00477 Phosphoglycerate kinase family signature 348 359 2.6E-86 T 11-11-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SHALO_RS02895 efdc706d8dbe229fc7f191ae32a2cfba 399 PRINTS PR00477 Phosphoglycerate kinase family signature 109 124 2.6E-86 T 11-11-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SHALO_RS02895 efdc706d8dbe229fc7f191ae32a2cfba 399 PRINTS PR00477 Phosphoglycerate kinase family signature 9 25 2.6E-86 T 11-11-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SHALO_RS02895 efdc706d8dbe229fc7f191ae32a2cfba 399 PRINTS PR00477 Phosphoglycerate kinase family signature 137 159 2.6E-86 T 11-11-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SHALO_RS02895 efdc706d8dbe229fc7f191ae32a2cfba 399 PRINTS PR00477 Phosphoglycerate kinase family signature 170 192 2.6E-86 T 11-11-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SHALO_RS02895 efdc706d8dbe229fc7f191ae32a2cfba 399 PRINTS PR00477 Phosphoglycerate kinase family signature 193 212 2.6E-86 T 11-11-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SHALO_RS02895 efdc706d8dbe229fc7f191ae32a2cfba 399 Pfam PF00162 Phosphoglycerate kinase 5 385 3.3E-151 T 11-11-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SHALO_RS02895 efdc706d8dbe229fc7f191ae32a2cfba 399 Gene3D G3DSA:3.40.50.1270 183 383 4.5E-81 T 11-11-2016 IPR015901 Phosphoglycerate kinase, C-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SHALO_RS02895 efdc706d8dbe229fc7f191ae32a2cfba 399 PIRSF PIRSF000724 1 399 2.7E-146 T 11-11-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SHALO_RS02895 efdc706d8dbe229fc7f191ae32a2cfba 399 Gene3D G3DSA:3.40.50.1260 3 180 1.1E-68 T 11-11-2016 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SHALO_RS01360 aad93cb397c46e53f93dad10f318d148 656 Pfam PF00672 HAMP domain 305 374 1.1E-10 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SHALO_RS01360 aad93cb397c46e53f93dad10f318d148 656 SUPERFAMILY SSF103190 108 204 1.31E-11 T 11-11-2016 IPR029151 Periplasmic sensor domain-like SHALO_RS01360 aad93cb397c46e53f93dad10f318d148 656 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 454 654 2.1E-42 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SHALO_RS01360 aad93cb397c46e53f93dad10f318d148 656 Gene3D G3DSA:1.10.287.950 604 653 2.5E-42 T 11-11-2016 SHALO_RS01360 aad93cb397c46e53f93dad10f318d148 656 Gene3D G3DSA:1.10.287.950 415 568 2.5E-42 T 11-11-2016 SHALO_RS01360 aad93cb397c46e53f93dad10f318d148 656 Gene3D G3DSA:3.30.450.20 170 301 3.9E-16 T 11-11-2016 SHALO_RS01360 aad93cb397c46e53f93dad10f318d148 656 SMART SM00304 325 379 1.4E-6 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SHALO_RS01360 aad93cb397c46e53f93dad10f318d148 656 SMART SM00283 394 655 1.3E-40 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SHALO_RS01360 aad93cb397c46e53f93dad10f318d148 656 SUPERFAMILY SSF58104 347 655 2.09E-57 T 11-11-2016 SHALO_RS01360 aad93cb397c46e53f93dad10f318d148 656 Pfam PF17201 Cache 3/Cache 2 fusion domain 32 301 5.6E-83 T 11-11-2016 IPR033462 Cache 3/Cache 2 fusion domain SHALO_RS10665 0328d6bed8d2601398daa6543ee054e0 111 SUPERFAMILY SSF55159 39 110 1.15E-13 T 11-11-2016 IPR001950 Translation initiation factor SUI1 GO:0003743|GO:0006413 SHALO_RS10665 0328d6bed8d2601398daa6543ee054e0 111 PIRSF PIRSF037511 2 111 3.5E-21 T 11-11-2016 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 SHALO_RS10665 0328d6bed8d2601398daa6543ee054e0 111 Gene3D G3DSA:3.30.780.10 41 110 1.7E-18 T 11-11-2016 IPR001950 Translation initiation factor SUI1 GO:0003743|GO:0006413 SHALO_RS10665 0328d6bed8d2601398daa6543ee054e0 111 Pfam PF01253 Translation initiation factor SUI1 43 106 1.1E-6 T 11-11-2016 IPR001950 Translation initiation factor SUI1 GO:0003743|GO:0006413 SHALO_RS13780 6eef2815a235868c1da8d55108afdb73 223 Gene3D G3DSA:1.10.10.10 131 221 1.9E-23 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS13780 6eef2815a235868c1da8d55108afdb73 223 SMART SM00448 2 113 6.8E-29 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS13780 6eef2815a235868c1da8d55108afdb73 223 SUPERFAMILY SSF52172 1 128 2.85E-33 T 11-11-2016 IPR011006 CheY-like superfamily SHALO_RS13780 6eef2815a235868c1da8d55108afdb73 223 SMART SM00862 144 220 6.2E-14 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS13780 6eef2815a235868c1da8d55108afdb73 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 220 6.7E-18 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS13780 6eef2815a235868c1da8d55108afdb73 223 Pfam PF00072 Response regulator receiver domain 4 113 5.7E-21 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS13780 6eef2815a235868c1da8d55108afdb73 223 SUPERFAMILY SSF46894 131 221 4.54E-20 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SHALO_RS13780 6eef2815a235868c1da8d55108afdb73 223 Gene3D G3DSA:3.40.50.2300 1 123 1.5E-31 T 11-11-2016 SHALO_RS11730 6c8231177d1c9f7e1059d192d446170d 465 SUPERFAMILY SSF56954 2 460 7.98E-98 T 11-11-2016 SHALO_RS11730 6c8231177d1c9f7e1059d192d446170d 465 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 10 459 3.9E-106 T 11-11-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 SHALO_RS11730 6c8231177d1c9f7e1059d192d446170d 465 Gene3D G3DSA:2.20.200.10 94 133 1.8E-18 T 11-11-2016 SHALO_RS11730 6c8231177d1c9f7e1059d192d446170d 465 Gene3D G3DSA:2.20.200.10 308 344 1.8E-18 T 11-11-2016 SHALO_RS11730 6c8231177d1c9f7e1059d192d446170d 465 Pfam PF02321 Outer membrane efflux protein 278 457 2.7E-26 T 11-11-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SHALO_RS11730 6c8231177d1c9f7e1059d192d446170d 465 Pfam PF02321 Outer membrane efflux protein 58 246 3.1E-27 T 11-11-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SHALO_RS11730 6c8231177d1c9f7e1059d192d446170d 465 Gene3D G3DSA:1.20.1600.10 134 307 1.4E-82 T 11-11-2016 SHALO_RS11730 6c8231177d1c9f7e1059d192d446170d 465 Gene3D G3DSA:1.20.1600.10 46 84 1.4E-82 T 11-11-2016 SHALO_RS11730 6c8231177d1c9f7e1059d192d446170d 465 Gene3D G3DSA:1.20.1600.10 346 459 1.4E-82 T 11-11-2016 SHALO_RS12055 961d90f1eb8381e77d19cac7ac10aa28 664 Pfam PF02779 Transketolase, pyrimidine binding domain 345 510 7.8E-39 T 11-11-2016 IPR005475 Transketolase-like, pyrimidine-binding domain SHALO_RS12055 961d90f1eb8381e77d19cac7ac10aa28 664 TIGRFAM TIGR00232 tktlase_bact: transketolase 8 639 7.6E-238 T 11-11-2016 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 SHALO_RS12055 961d90f1eb8381e77d19cac7ac10aa28 664 SMART SM00861 345 511 5.1E-58 T 11-11-2016 IPR005475 Transketolase-like, pyrimidine-binding domain SHALO_RS12055 961d90f1eb8381e77d19cac7ac10aa28 664 Gene3D G3DSA:3.40.50.970 3 314 8.2E-116 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold SHALO_RS12055 961d90f1eb8381e77d19cac7ac10aa28 664 SUPERFAMILY SSF52518 338 511 4.16E-57 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold SHALO_RS12055 961d90f1eb8381e77d19cac7ac10aa28 664 ProSitePatterns PS00802 Transketolase signature 2. 454 470 - T 11-11-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 SHALO_RS12055 961d90f1eb8381e77d19cac7ac10aa28 664 Gene3D G3DSA:3.40.50.970 331 516 5.0E-63 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold SHALO_RS12055 961d90f1eb8381e77d19cac7ac10aa28 664 SUPERFAMILY SSF52518 2 314 7.5E-103 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold SHALO_RS12055 961d90f1eb8381e77d19cac7ac10aa28 664 ProSitePatterns PS00801 Transketolase signature 1. 15 35 - T 11-11-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 SHALO_RS12055 961d90f1eb8381e77d19cac7ac10aa28 664 SUPERFAMILY SSF52922 520 644 1.26E-34 T 11-11-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 SHALO_RS12055 961d90f1eb8381e77d19cac7ac10aa28 664 Gene3D G3DSA:3.40.50.920 524 640 2.5E-33 T 11-11-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 SHALO_RS12055 961d90f1eb8381e77d19cac7ac10aa28 664 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 8 315 1.2E-124 T 11-11-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 SHALO_RS08140 8ec3f06b6c8f4120a4476d642f94d8c4 160 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 2 158 33.984 T 11-11-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 SHALO_RS08140 8ec3f06b6c8f4120a4476d642f94d8c4 160 Pfam PF01467 Cytidylyltransferase-like 5 133 1.9E-21 T 11-11-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 SHALO_RS08140 8ec3f06b6c8f4120a4476d642f94d8c4 160 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 3 60 9.1E-18 T 11-11-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 SHALO_RS08140 8ec3f06b6c8f4120a4476d642f94d8c4 160 SUPERFAMILY SSF52374 1 154 4.56E-44 T 11-11-2016 SHALO_RS08140 8ec3f06b6c8f4120a4476d642f94d8c4 160 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 11 153 1.0E-4 T 11-11-2016 SHALO_RS08140 8ec3f06b6c8f4120a4476d642f94d8c4 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 112 134 4.1E-46 T 11-11-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 SHALO_RS08140 8ec3f06b6c8f4120a4476d642f94d8c4 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 20 41 4.1E-46 T 11-11-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 SHALO_RS08140 8ec3f06b6c8f4120a4476d642f94d8c4 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 49 73 4.1E-46 T 11-11-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 SHALO_RS08140 8ec3f06b6c8f4120a4476d642f94d8c4 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 2 20 4.1E-46 T 11-11-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 SHALO_RS08140 8ec3f06b6c8f4120a4476d642f94d8c4 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 85 101 4.1E-46 T 11-11-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 SHALO_RS08140 8ec3f06b6c8f4120a4476d642f94d8c4 160 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 3 156 8.5E-60 T 11-11-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 SHALO_RS08140 8ec3f06b6c8f4120a4476d642f94d8c4 160 Gene3D G3DSA:3.40.50.620 1 157 5.4E-52 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHALO_RS09035 7bd81be9c6c4decff8ebb4691df3978e 536 Pfam PF12729 Four helix bundle sensory module for signal transduction 1 176 1.1E-17 T 11-11-2016 IPR024478 4HB MCP domain SHALO_RS09035 7bd81be9c6c4decff8ebb4691df3978e 536 Gene3D G3DSA:1.10.287.950 293 448 1.4E-45 T 11-11-2016 SHALO_RS09035 7bd81be9c6c4decff8ebb4691df3978e 536 Gene3D G3DSA:1.10.287.950 484 527 1.4E-45 T 11-11-2016 SHALO_RS09035 7bd81be9c6c4decff8ebb4691df3978e 536 SMART SM00283 274 535 2.1E-49 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SHALO_RS09035 7bd81be9c6c4decff8ebb4691df3978e 536 SUPERFAMILY SSF58104 228 535 9.59E-60 T 11-11-2016 SHALO_RS09035 7bd81be9c6c4decff8ebb4691df3978e 536 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 372 399 1.2E-20 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SHALO_RS09035 7bd81be9c6c4decff8ebb4691df3978e 536 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 1 13 1.2E-20 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SHALO_RS09035 7bd81be9c6c4decff8ebb4691df3978e 536 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 401 430 1.2E-20 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SHALO_RS09035 7bd81be9c6c4decff8ebb4691df3978e 536 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 339 534 1.0E-43 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SHALO_RS07715 08d63ad12874c130f6e88a41d3bde2ff 201 Gene3D G3DSA:3.30.160.110 113 148 4.3E-13 T 11-11-2016 SHALO_RS07715 08d63ad12874c130f6e88a41d3bde2ff 201 Pfam PF13241 Putative NAD(P)-binding 7 115 5.1E-25 T 11-11-2016 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 SHALO_RS07715 08d63ad12874c130f6e88a41d3bde2ff 201 SUPERFAMILY SSF75615 108 184 1.07E-12 T 11-11-2016 SHALO_RS07715 08d63ad12874c130f6e88a41d3bde2ff 201 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 153 2.7E-33 T 11-11-2016 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 SHALO_RS07715 08d63ad12874c130f6e88a41d3bde2ff 201 Gene3D G3DSA:3.40.50.720 1 112 3.2E-30 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS07715 08d63ad12874c130f6e88a41d3bde2ff 201 SUPERFAMILY SSF51735 1 113 6.97E-21 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS08170 792f14f1afb96b4e87cd32ef177f65c6 422 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 8 409 9.1E-100 T 11-11-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 SHALO_RS08170 792f14f1afb96b4e87cd32ef177f65c6 422 Gene3D G3DSA:3.65.10.10 22 221 1.8E-59 T 11-11-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 SHALO_RS08170 792f14f1afb96b4e87cd32ef177f65c6 422 Gene3D G3DSA:3.65.10.10 228 420 1.8E-59 T 11-11-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 SHALO_RS08170 792f14f1afb96b4e87cd32ef177f65c6 422 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2 419 4.1E-177 T 11-11-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387 SHALO_RS08170 792f14f1afb96b4e87cd32ef177f65c6 422 SUPERFAMILY SSF55205 2 421 4.41E-132 T 11-11-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 SHALO_RS08170 792f14f1afb96b4e87cd32ef177f65c6 422 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 2 420 43.301 T 11-11-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387 SHALO_RS06190 787aca788b075ed434cfc77748541b98 659 Pfam PF10136 Site-specific recombinase 19 652 1.7E-211 T 11-11-2016 IPR011385 Site-specific recombinase Gcr SHALO_RS06190 787aca788b075ed434cfc77748541b98 659 PIRSF PIRSF015380 2 659 4.9E-183 T 11-11-2016 IPR011385 Site-specific recombinase Gcr SHALO_RS06190 787aca788b075ed434cfc77748541b98 659 Gene3D G3DSA:1.20.1080.10 338 414 4.7E-4 T 11-11-2016 IPR023271 Aquaporin-like Reactome: R-HSA-432047 SHALO_RS05510 2ce2134f0fde38695f4f3df67e61e062 280 Gene3D G3DSA:3.40.50.150 90 272 1.5E-50 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS05510 2ce2134f0fde38695f4f3df67e61e062 280 PRINTS PR00996 Glutamate methyltransferase family signature 47 60 7.2E-31 T 11-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SHALO_RS05510 2ce2134f0fde38695f4f3df67e61e062 280 PRINTS PR00996 Glutamate methyltransferase family signature 236 259 7.2E-31 T 11-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SHALO_RS05510 2ce2134f0fde38695f4f3df67e61e062 280 PRINTS PR00996 Glutamate methyltransferase family signature 84 96 7.2E-31 T 11-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SHALO_RS05510 2ce2134f0fde38695f4f3df67e61e062 280 PRINTS PR00996 Glutamate methyltransferase family signature 217 231 7.2E-31 T 11-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SHALO_RS05510 2ce2134f0fde38695f4f3df67e61e062 280 PRINTS PR00996 Glutamate methyltransferase family signature 149 165 7.2E-31 T 11-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SHALO_RS05510 2ce2134f0fde38695f4f3df67e61e062 280 PRINTS PR00996 Glutamate methyltransferase family signature 116 136 7.2E-31 T 11-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SHALO_RS05510 2ce2134f0fde38695f4f3df67e61e062 280 Pfam PF01739 CheR methyltransferase, SAM binding domain 91 266 1.9E-45 T 11-11-2016 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal SHALO_RS05510 2ce2134f0fde38695f4f3df67e61e062 280 SUPERFAMILY SSF53335 91 267 8.98E-43 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS05510 2ce2134f0fde38695f4f3df67e61e062 280 SUPERFAMILY SSF47757 24 90 5.75E-5 T 11-11-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal SHALO_RS05510 2ce2134f0fde38695f4f3df67e61e062 280 SMART SM00138 21 276 7.3E-52 T 11-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SHALO_RS03880 375177b3e03ba44946d84348ae675433 100 ProSitePatterns PS00605 ATP synthase c subunit signature. 58 79 - T 11-11-2016 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210 SHALO_RS03880 375177b3e03ba44946d84348ae675433 100 Hamap MF_01396 ATP synthase subunit c [atpH]. 27 95 16.012 T 11-11-2016 SHALO_RS03880 375177b3e03ba44946d84348ae675433 100 Gene3D G3DSA:1.20.20.10 27 94 2.8E-23 T 11-11-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210 SHALO_RS03880 375177b3e03ba44946d84348ae675433 100 Pfam PF00137 ATP synthase subunit C 29 92 4.0E-16 T 11-11-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 SHALO_RS03880 375177b3e03ba44946d84348ae675433 100 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 38 94 8.6E-16 T 11-11-2016 IPR005953 ATPase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 SHALO_RS03880 375177b3e03ba44946d84348ae675433 100 SUPERFAMILY SSF81333 23 97 1.02E-20 T 11-11-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 SHALO_RS03880 375177b3e03ba44946d84348ae675433 100 PRINTS PR00124 ATP synthase C subunit signature 68 93 1.4E-15 T 11-11-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210 SHALO_RS03880 375177b3e03ba44946d84348ae675433 100 PRINTS PR00124 ATP synthase C subunit signature 51 66 1.4E-15 T 11-11-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210 SHALO_RS03880 375177b3e03ba44946d84348ae675433 100 PRINTS PR00124 ATP synthase C subunit signature 30 49 1.4E-15 T 11-11-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210 SHALO_RS09745 7684a46dd4fa661bb3f94c20b8971d38 293 Gene3D G3DSA:3.20.20.60 5 281 1.7E-95 T 11-11-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SHALO_RS09745 7684a46dd4fa661bb3f94c20b8971d38 293 Pfam PF13714 Phosphoenolpyruvate phosphomutase 9 252 7.2E-51 T 11-11-2016 SHALO_RS09745 7684a46dd4fa661bb3f94c20b8971d38 293 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 5 288 6.1E-133 T 11-11-2016 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 SHALO_RS09745 7684a46dd4fa661bb3f94c20b8971d38 293 ProSitePatterns PS00161 Isocitrate lyase signature. 118 123 - T 11-11-2016 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824|GO:0008152 SHALO_RS09745 7684a46dd4fa661bb3f94c20b8971d38 293 SUPERFAMILY SSF51621 5 287 2.24E-98 T 11-11-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SHALO_RS09745 7684a46dd4fa661bb3f94c20b8971d38 293 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 2 289 47.876 T 11-11-2016 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 SHALO_RS12070 038e8122ba6dd738040d6779aa61c262 105 PIRSF PIRSF004555 3 105 4.7E-24 T 11-11-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family SHALO_RS12070 038e8122ba6dd738040d6779aa61c262 105 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 5 97 16.699 T 11-11-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family SHALO_RS12070 038e8122ba6dd738040d6779aa61c262 105 Gene3D G3DSA:3.30.1310.10 4 99 3.8E-30 T 11-11-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family SHALO_RS12070 038e8122ba6dd738040d6779aa61c262 105 Pfam PF02575 YbaB/EbfC DNA-binding family 14 98 8.6E-21 T 11-11-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family SHALO_RS12070 038e8122ba6dd738040d6779aa61c262 105 SUPERFAMILY SSF82607 9 97 6.15E-20 T 11-11-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family SHALO_RS12070 038e8122ba6dd738040d6779aa61c262 105 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 5 99 1.2E-21 T 11-11-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family SHALO_RS14770 ce823f9470394237ef46df35687ecbf1 961 Pfam PF00563 EAL domain 709 944 7.7E-69 T 11-11-2016 IPR001633 EAL domain SHALO_RS14770 ce823f9470394237ef46df35687ecbf1 961 Pfam PF13426 PAS domain 408 512 1.9E-10 T 11-11-2016 IPR000014 PAS domain SHALO_RS14770 ce823f9470394237ef46df35687ecbf1 961 SMART SM01049 74 168 2.2E-21 T 11-11-2016 IPR033480 Single Cache domain 2 SHALO_RS14770 ce823f9470394237ef46df35687ecbf1 961 SMART SM01049 190 277 4.0E-5 T 11-11-2016 IPR033480 Single Cache domain 2 SHALO_RS14770 ce823f9470394237ef46df35687ecbf1 961 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 394 520 8.8E-9 T 11-11-2016 IPR000014 PAS domain SHALO_RS14770 ce823f9470394237ef46df35687ecbf1 961 Gene3D G3DSA:3.30.450.20 221 327 7.6E-20 T 11-11-2016 SHALO_RS14770 ce823f9470394237ef46df35687ecbf1 961 Gene3D G3DSA:3.30.450.20 69 220 5.1E-35 T 11-11-2016 SHALO_RS14770 ce823f9470394237ef46df35687ecbf1 961 Gene3D G3DSA:3.20.20.450 706 957 5.4E-93 T 11-11-2016 IPR001633 EAL domain SHALO_RS14770 ce823f9470394237ef46df35687ecbf1 961 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 530 692 7.2E-47 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS14770 ce823f9470394237ef46df35687ecbf1 961 SMART SM00267 521 693 9.0E-68 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS14770 ce823f9470394237ef46df35687ecbf1 961 Gene3D G3DSA:3.30.450.20 389 512 3.0E-15 T 11-11-2016 SHALO_RS14770 ce823f9470394237ef46df35687ecbf1 961 SMART SM00052 703 949 2.5E-108 T 11-11-2016 IPR001633 EAL domain SHALO_RS14770 ce823f9470394237ef46df35687ecbf1 961 Pfam PF00990 Diguanylate cyclase, GGDEF domain 533 689 3.0E-53 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS14770 ce823f9470394237ef46df35687ecbf1 961 SUPERFAMILY SSF55073 537 695 1.45E-52 T 11-11-2016 IPR029787 Nucleotide cyclase SHALO_RS14770 ce823f9470394237ef46df35687ecbf1 961 SUPERFAMILY SSF141868 708 957 4.58E-85 T 11-11-2016 IPR001633 EAL domain SHALO_RS14770 ce823f9470394237ef46df35687ecbf1 961 Gene3D G3DSA:3.30.70.270 533 701 9.4E-60 T 11-11-2016 SHALO_RS14770 ce823f9470394237ef46df35687ecbf1 961 SUPERFAMILY SSF55785 389 512 2.44E-14 T 11-11-2016 IPR000014 PAS domain SHALO_RS14770 ce823f9470394237ef46df35687ecbf1 961 Pfam PF08269 Cache domain 38 327 1.5E-70 T 11-11-2016 IPR004010 Double Cache domain 2 SHALO_RS11720 7dd71a7acdf6d14492d2b92bcd20329a 377 Pfam PF00529 HlyD membrane-fusion protein of T1SS 32 351 1.1E-8 T 11-11-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 SHALO_RS11720 7dd71a7acdf6d14492d2b92bcd20329a 377 SUPERFAMILY SSF111369 45 289 5.49E-78 T 11-11-2016 SHALO_RS11720 7dd71a7acdf6d14492d2b92bcd20329a 377 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 34 366 9.6E-84 T 11-11-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 SHALO_RS11720 7dd71a7acdf6d14492d2b92bcd20329a 377 Gene3D G3DSA:2.40.50.100 60 91 2.0E-23 T 11-11-2016 SHALO_RS11720 7dd71a7acdf6d14492d2b92bcd20329a 377 Gene3D G3DSA:2.40.50.100 166 199 2.0E-23 T 11-11-2016 SHALO_RS11720 7dd71a7acdf6d14492d2b92bcd20329a 377 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 55 284 2.4E-14 T 11-11-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SHALO_RS13820 75dd0bcf9781339b675137d3b2724e64 678 Pfam PF00122 E1-E2 ATPase 72 293 3.3E-43 T 11-11-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 SHALO_RS13820 75dd0bcf9781339b675137d3b2724e64 678 Gene3D G3DSA:3.40.50.1000 440 559 1.1E-36 T 11-11-2016 IPR023214 HAD-like domain SHALO_RS13820 75dd0bcf9781339b675137d3b2724e64 678 Gene3D G3DSA:3.40.1110.10 313 439 1.9E-40 T 11-11-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 SHALO_RS13820 75dd0bcf9781339b675137d3b2724e64 678 SUPERFAMILY SSF81653 110 204 1.96E-22 T 11-11-2016 SHALO_RS13820 75dd0bcf9781339b675137d3b2724e64 678 SUPERFAMILY SSF56784 299 560 2.61E-37 T 11-11-2016 IPR023214 HAD-like domain SHALO_RS13820 75dd0bcf9781339b675137d3b2724e64 678 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 72 338 4.3E-31 T 11-11-2016 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 SHALO_RS13820 75dd0bcf9781339b675137d3b2724e64 678 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 368 597 2.7E-43 T 11-11-2016 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 SHALO_RS13820 75dd0bcf9781339b675137d3b2724e64 678 TIGRFAM TIGR01497 kdpB: K+-transporting ATPase, B subunit 8 672 2.2E-304 T 11-11-2016 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 SHALO_RS13820 75dd0bcf9781339b675137d3b2724e64 678 Gene3D G3DSA:2.70.150.10 38 205 7.9E-26 T 11-11-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 SHALO_RS13820 75dd0bcf9781339b675137d3b2724e64 678 SUPERFAMILY SSF81665 205 296 2.35E-11 T 11-11-2016 SHALO_RS13820 75dd0bcf9781339b675137d3b2724e64 678 SUPERFAMILY SSF81665 28 103 2.35E-11 T 11-11-2016 SHALO_RS13820 75dd0bcf9781339b675137d3b2724e64 678 Pfam PF00702 haloacid dehalogenase-like hydrolase 298 526 4.5E-30 T 11-11-2016 SHALO_RS13820 75dd0bcf9781339b675137d3b2724e64 678 Hamap MF_00285 Potassium-transporting ATPase ATP-binding subunit [kdpB]. 8 676 38.845 T 11-11-2016 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 SHALO_RS13820 75dd0bcf9781339b675137d3b2724e64 678 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 304 310 - T 11-11-2016 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 SHALO_RS13820 75dd0bcf9781339b675137d3b2724e64 678 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 302 316 2.4E-25 T 11-11-2016 SHALO_RS13820 75dd0bcf9781339b675137d3b2724e64 678 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 512 531 2.4E-25 T 11-11-2016 SHALO_RS13820 75dd0bcf9781339b675137d3b2724e64 678 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 459 469 2.4E-25 T 11-11-2016 SHALO_RS13820 75dd0bcf9781339b675137d3b2724e64 678 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 151 165 2.4E-25 T 11-11-2016 SHALO_RS13820 75dd0bcf9781339b675137d3b2724e64 678 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 535 547 2.4E-25 T 11-11-2016 SHALO_RS02860 22a0aa8a57beda4379f98aff9ab87aa0 634 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 224 384 3.1E-41 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS02860 22a0aa8a57beda4379f98aff9ab87aa0 634 SUPERFAMILY SSF55073 231 387 1.57E-36 T 11-11-2016 IPR029787 Nucleotide cyclase SHALO_RS02860 22a0aa8a57beda4379f98aff9ab87aa0 634 SUPERFAMILY SSF141868 399 631 4.58E-56 T 11-11-2016 IPR001633 EAL domain SHALO_RS02860 22a0aa8a57beda4379f98aff9ab87aa0 634 Pfam PF00563 EAL domain 399 628 1.1E-52 T 11-11-2016 IPR001633 EAL domain SHALO_RS02860 22a0aa8a57beda4379f98aff9ab87aa0 634 Gene3D G3DSA:3.20.20.450 399 631 1.8E-54 T 11-11-2016 IPR001633 EAL domain SHALO_RS02860 22a0aa8a57beda4379f98aff9ab87aa0 634 Pfam PF00990 Diguanylate cyclase, GGDEF domain 226 381 2.2E-35 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS02860 22a0aa8a57beda4379f98aff9ab87aa0 634 Gene3D G3DSA:3.30.70.270 228 390 1.3E-41 T 11-11-2016 SHALO_RS02860 22a0aa8a57beda4379f98aff9ab87aa0 634 SMART SM00052 393 633 7.8E-38 T 11-11-2016 IPR001633 EAL domain SHALO_RS02860 22a0aa8a57beda4379f98aff9ab87aa0 634 SMART SM00267 215 385 1.3E-41 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS10510 92677ea94fdecc8bb5d2a68fd5002063 339 Pfam PF08218 Citrate lyase ligase C-terminal domain 144 327 1.0E-77 T 11-11-2016 IPR013166 Citrate lyase ligase, C-terminal GO:0008771 SHALO_RS10510 92677ea94fdecc8bb5d2a68fd5002063 339 TIGRFAM TIGR00124 cit_ly_ligase: [citrate (pro-3S)-lyase] ligase 14 335 1.4E-127 T 11-11-2016 IPR005216 Citrate lyase ligase GO:0008771 SHALO_RS10510 92677ea94fdecc8bb5d2a68fd5002063 339 PIRSF PIRSF005751 2 339 1.3E-125 T 11-11-2016 IPR005216 Citrate lyase ligase GO:0008771 SHALO_RS10510 92677ea94fdecc8bb5d2a68fd5002063 339 SUPERFAMILY SSF55729 19 117 6.2E-14 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase SHALO_RS10510 92677ea94fdecc8bb5d2a68fd5002063 339 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 111 336 8.0E-65 T 11-11-2016 SHALO_RS10510 92677ea94fdecc8bb5d2a68fd5002063 339 Gene3D G3DSA:3.40.630.30 17 114 3.9E-13 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase SHALO_RS10510 92677ea94fdecc8bb5d2a68fd5002063 339 Gene3D G3DSA:3.40.50.620 128 330 9.3E-32 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHALO_RS10510 92677ea94fdecc8bb5d2a68fd5002063 339 SMART SM00764 144 329 1.3E-111 T 11-11-2016 IPR013166 Citrate lyase ligase, C-terminal GO:0008771 SHALO_RS10510 92677ea94fdecc8bb5d2a68fd5002063 339 Pfam PF13673 Acetyltransferase (GNAT) domain 24 113 8.8E-8 T 11-11-2016 IPR000182 GNAT domain GO:0008080 SHALO_RS10510 92677ea94fdecc8bb5d2a68fd5002063 339 SUPERFAMILY SSF52374 296 330 3.52E-21 T 11-11-2016 SHALO_RS10510 92677ea94fdecc8bb5d2a68fd5002063 339 SUPERFAMILY SSF52374 144 260 3.52E-21 T 11-11-2016 SHALO_RS14735 120fda3d78789c2ad2d2b781ab5d91d0 423 SMART SM01192 138 423 2.4E-199 T 11-11-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SHALO_RS14735 120fda3d78789c2ad2d2b781ab5d91d0 423 SUPERFAMILY SSF51604 137 411 1.35E-118 T 11-11-2016 IPR029065 Enolase C-terminal domain-like SHALO_RS14735 120fda3d78789c2ad2d2b781ab5d91d0 423 ProSitePatterns PS00164 Enolase signature. 333 346 - T 11-11-2016 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SHALO_RS14735 120fda3d78789c2ad2d2b781ab5d91d0 423 PRINTS PR00148 Enolase signature 333 347 1.3E-41 T 11-11-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SHALO_RS14735 120fda3d78789c2ad2d2b781ab5d91d0 423 PRINTS PR00148 Enolase signature 310 321 1.3E-41 T 11-11-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SHALO_RS14735 120fda3d78789c2ad2d2b781ab5d91d0 423 PRINTS PR00148 Enolase signature 106 122 1.3E-41 T 11-11-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SHALO_RS14735 120fda3d78789c2ad2d2b781ab5d91d0 423 PRINTS PR00148 Enolase signature 37 51 1.3E-41 T 11-11-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SHALO_RS14735 120fda3d78789c2ad2d2b781ab5d91d0 423 PRINTS PR00148 Enolase signature 160 173 1.3E-41 T 11-11-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SHALO_RS14735 120fda3d78789c2ad2d2b781ab5d91d0 423 PRINTS PR00148 Enolase signature 362 379 1.3E-41 T 11-11-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SHALO_RS14735 120fda3d78789c2ad2d2b781ab5d91d0 423 SMART SM01193 4 133 1.4E-86 T 11-11-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SHALO_RS14735 120fda3d78789c2ad2d2b781ab5d91d0 423 Pfam PF00113 Enolase, C-terminal TIM barrel domain 139 420 3.2E-115 T 11-11-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SHALO_RS14735 120fda3d78789c2ad2d2b781ab5d91d0 423 PIRSF PIRSF001400 1 423 8.0E-183 T 11-11-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SHALO_RS14735 120fda3d78789c2ad2d2b781ab5d91d0 423 Gene3D G3DSA:3.20.20.120 127 419 8.5E-126 T 11-11-2016 IPR029065 Enolase C-terminal domain-like SHALO_RS14735 120fda3d78789c2ad2d2b781ab5d91d0 423 Hamap MF_00318 Enolase [eno]. 2 410 42.631 T 11-11-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SHALO_RS14735 120fda3d78789c2ad2d2b781ab5d91d0 423 Pfam PF03952 Enolase, N-terminal domain 4 133 4.8E-55 T 11-11-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SHALO_RS14735 120fda3d78789c2ad2d2b781ab5d91d0 423 Gene3D G3DSA:3.30.390.10 4 125 4.2E-51 T 11-11-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SHALO_RS14735 120fda3d78789c2ad2d2b781ab5d91d0 423 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 422 1.0E-199 T 11-11-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SHALO_RS14735 120fda3d78789c2ad2d2b781ab5d91d0 423 SUPERFAMILY SSF54826 4 135 1.93E-51 T 11-11-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SHALO_RS12730 6d00fce85fb13df42beb997fc72f0f15 321 SUPERFAMILY SSF46689 216 265 3.05E-6 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 SHALO_RS12730 6d00fce85fb13df42beb997fc72f0f15 321 SMART SM00342 231 314 4.3E-27 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SHALO_RS12730 6d00fce85fb13df42beb997fc72f0f15 321 SUPERFAMILY SSF46689 268 313 7.62E-10 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 SHALO_RS12730 6d00fce85fb13df42beb997fc72f0f15 321 Gene3D G3DSA:1.10.10.60 268 313 2.3E-13 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 SHALO_RS12730 6d00fce85fb13df42beb997fc72f0f15 321 Gene3D G3DSA:1.10.10.60 217 267 1.5E-12 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 SHALO_RS12730 6d00fce85fb13df42beb997fc72f0f15 321 Pfam PF12833 Helix-turn-helix domain 237 313 5.2E-20 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SHALO_RS07230 aa6db41437b8e74ff4066c632b583bb9 225 PIRSF PIRSF004848 2 225 2.2E-66 T 11-11-2016 IPR011078 Uncharacterised protein family UPF0001 SHALO_RS07230 aa6db41437b8e74ff4066c632b583bb9 225 Pfam PF01168 Alanine racemase, N-terminal domain 11 224 7.2E-22 T 11-11-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 SHALO_RS07230 aa6db41437b8e74ff4066c632b583bb9 225 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 8 225 8.0E-66 T 11-11-2016 IPR011078 Uncharacterised protein family UPF0001 SHALO_RS07230 aa6db41437b8e74ff4066c632b583bb9 225 Gene3D G3DSA:3.20.20.10 3 224 1.6E-66 T 11-11-2016 IPR029066 PLP-binding barrel SHALO_RS07230 aa6db41437b8e74ff4066c632b583bb9 225 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 77 91 - T 11-11-2016 IPR011078 Uncharacterised protein family UPF0001 SHALO_RS07230 aa6db41437b8e74ff4066c632b583bb9 225 SUPERFAMILY SSF51419 4 224 1.16E-60 T 11-11-2016 IPR029066 PLP-binding barrel SHALO_RS10340 20293a3dd4a0a50d144df2c1063aabf8 211 SUPERFAMILY SSF89155 6 200 1.96E-33 T 11-11-2016 IPR020945 DMSO/Nitrate reductase chaperone SHALO_RS10340 20293a3dd4a0a50d144df2c1063aabf8 211 Gene3D G3DSA:1.10.3480.10 5 198 3.6E-36 T 11-11-2016 IPR020945 DMSO/Nitrate reductase chaperone SHALO_RS10340 20293a3dd4a0a50d144df2c1063aabf8 211 Pfam PF02613 Nitrate reductase delta subunit 57 166 6.9E-23 T 11-11-2016 IPR020945 DMSO/Nitrate reductase chaperone SHALO_RS01755 8846faa6a80c27c305862bea20a05f80 221 Gene3D G3DSA:3.40.50.300 1 221 4.0E-63 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS01755 8846faa6a80c27c305862bea20a05f80 221 SUPERFAMILY SSF52540 1 221 3.28E-60 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS01755 8846faa6a80c27c305862bea20a05f80 221 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHALO_RS01755 8846faa6a80c27c305862bea20a05f80 221 SMART SM00382 30 219 6.7E-17 T 11-11-2016 IPR003593 AAA+ ATPase domain SHALO_RS01755 8846faa6a80c27c305862bea20a05f80 221 Pfam PF00005 ABC transporter 21 170 1.6E-35 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_RS12840 8846faa6a80c27c305862bea20a05f80 221 Gene3D G3DSA:3.40.50.300 1 221 4.0E-63 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS12840 8846faa6a80c27c305862bea20a05f80 221 SUPERFAMILY SSF52540 1 221 3.28E-60 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS12840 8846faa6a80c27c305862bea20a05f80 221 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHALO_RS12840 8846faa6a80c27c305862bea20a05f80 221 SMART SM00382 30 219 6.7E-17 T 11-11-2016 IPR003593 AAA+ ATPase domain SHALO_RS12840 8846faa6a80c27c305862bea20a05f80 221 Pfam PF00005 ABC transporter 21 170 1.6E-35 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_RS05530 4db130f6d39539a5719b5df716e76448 401 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 88 102 - T 11-11-2016 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 SHALO_RS05530 4db130f6d39539a5719b5df716e76448 401 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 61 385 7.1E-45 T 11-11-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SHALO_RS05530 4db130f6d39539a5719b5df716e76448 401 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 15 394 6.5E-191 T 11-11-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 SHALO_RS05530 4db130f6d39539a5719b5df716e76448 401 Gene3D G3DSA:3.40.50.1100 185 399 8.0E-89 T 11-11-2016 SHALO_RS05530 4db130f6d39539a5719b5df716e76448 401 PIRSF PIRSF001413 5 400 4.1E-165 T 11-11-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 SHALO_RS05530 4db130f6d39539a5719b5df716e76448 401 SUPERFAMILY SSF53686 11 393 6.29E-145 T 11-11-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SHALO_RS05530 4db130f6d39539a5719b5df716e76448 401 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 10 398 51.974 T 11-11-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 SHALO_RS05530 4db130f6d39539a5719b5df716e76448 401 Gene3D G3DSA:3.40.50.1100 106 184 3.8E-21 T 11-11-2016 SHALO_RS14520 59004f000d7a178da086c7b097aeedf0 453 Gene3D G3DSA:3.40.192.10 68 188 2.0E-59 T 11-11-2016 SHALO_RS14520 59004f000d7a178da086c7b097aeedf0 453 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 122 135 - T 11-11-2016 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-70614 SHALO_RS14520 59004f000d7a178da086c7b097aeedf0 453 SUPERFAMILY SSF51735 202 451 1.79E-64 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS14520 59004f000d7a178da086c7b097aeedf0 453 Gene3D G3DSA:1.10.285.10 378 452 1.6E-22 T 11-11-2016 SHALO_RS14520 59004f000d7a178da086c7b097aeedf0 453 Gene3D G3DSA:1.10.285.10 6 67 8.7E-23 T 11-11-2016 SHALO_RS14520 59004f000d7a178da086c7b097aeedf0 453 SMART SM00839 204 451 7.0E-68 T 11-11-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 SHALO_RS14520 59004f000d7a178da086c7b097aeedf0 453 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 235 255 3.3E-28 T 11-11-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 SHALO_RS14520 59004f000d7a178da086c7b097aeedf0 453 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 193 215 3.3E-28 T 11-11-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 SHALO_RS14520 59004f000d7a178da086c7b097aeedf0 453 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 377 388 3.3E-28 T 11-11-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 SHALO_RS14520 59004f000d7a178da086c7b097aeedf0 453 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 114 128 3.3E-28 T 11-11-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 SHALO_RS14520 59004f000d7a178da086c7b097aeedf0 453 PIRSF PIRSF000185 22 453 1.9E-104 T 11-11-2016 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 SHALO_RS14520 59004f000d7a178da086c7b097aeedf0 453 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 202 451 1.3E-74 T 11-11-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 SHALO_RS14520 59004f000d7a178da086c7b097aeedf0 453 Gene3D G3DSA:3.40.50.720 209 377 9.8E-50 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS14520 59004f000d7a178da086c7b097aeedf0 453 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 57 185 3.7E-48 T 11-11-2016 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 SHALO_RS14520 59004f000d7a178da086c7b097aeedf0 453 SUPERFAMILY SSF53223 7 196 4.16E-71 T 11-11-2016 SHALO_RS12295 317fd26fb00f1b5a786b1f25c707fcd7 74 SMART SM00899 1 73 1.6E-14 T 11-11-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 SHALO_RS12295 317fd26fb00f1b5a786b1f25c707fcd7 74 Pfam PF04023 FeoA domain 1 72 5.4E-13 T 11-11-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 SHALO_RS12295 317fd26fb00f1b5a786b1f25c707fcd7 74 SUPERFAMILY SSF50037 3 73 1.01E-13 T 11-11-2016 IPR008988 Transcriptional repressor, C-terminal SHALO_RS08975 b6986a9438732ef7911c6bdd4c042a9e 719 Pfam PF00403 Heavy-metal-associated domain 8 66 3.8E-11 T 11-11-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SHALO_RS08975 b6986a9438732ef7911c6bdd4c042a9e 719 PRINTS PR00943 Copper-transporting ATPase signature 139 158 4.5E-10 T 11-11-2016 SHALO_RS08975 b6986a9438732ef7911c6bdd4c042a9e 719 PRINTS PR00943 Copper-transporting ATPase signature 399 414 4.5E-10 T 11-11-2016 SHALO_RS08975 b6986a9438732ef7911c6bdd4c042a9e 719 PRINTS PR00943 Copper-transporting ATPase signature 48 68 4.5E-10 T 11-11-2016 SHALO_RS08975 b6986a9438732ef7911c6bdd4c042a9e 719 PRINTS PR00943 Copper-transporting ATPase signature 588 605 4.5E-10 T 11-11-2016 SHALO_RS08975 b6986a9438732ef7911c6bdd4c042a9e 719 PRINTS PR00943 Copper-transporting ATPase signature 20 34 4.5E-10 T 11-11-2016 SHALO_RS08975 b6986a9438732ef7911c6bdd4c042a9e 719 PRINTS PR00943 Copper-transporting ATPase signature 339 353 4.5E-10 T 11-11-2016 SHALO_RS08975 b6986a9438732ef7911c6bdd4c042a9e 719 SUPERFAMILY SSF55008 4 69 3.27E-16 T 11-11-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SHALO_RS08975 b6986a9438732ef7911c6bdd4c042a9e 719 ProSitePatterns PS01047 Heavy-metal-associated domain. 10 38 - T 11-11-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 SHALO_RS08975 b6986a9438732ef7911c6bdd4c042a9e 719 SUPERFAMILY SSF81653 219 316 3.27E-27 T 11-11-2016 SHALO_RS08975 b6986a9438732ef7911c6bdd4c042a9e 719 SUPERFAMILY SSF81665 660 690 1.05E-17 T 11-11-2016 SHALO_RS08975 b6986a9438732ef7911c6bdd4c042a9e 719 SUPERFAMILY SSF81665 317 410 1.05E-17 T 11-11-2016 SHALO_RS08975 b6986a9438732ef7911c6bdd4c042a9e 719 SUPERFAMILY SSF81665 166 220 1.05E-17 T 11-11-2016 SHALO_RS08975 b6986a9438732ef7911c6bdd4c042a9e 719 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 416 430 3.8E-27 T 11-11-2016 SHALO_RS08975 b6986a9438732ef7911c6bdd4c042a9e 719 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 536 547 3.8E-27 T 11-11-2016 SHALO_RS08975 b6986a9438732ef7911c6bdd4c042a9e 719 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 634 646 3.8E-27 T 11-11-2016 SHALO_RS08975 b6986a9438732ef7911c6bdd4c042a9e 719 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 266 280 3.8E-27 T 11-11-2016 SHALO_RS08975 b6986a9438732ef7911c6bdd4c042a9e 719 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 558 568 3.8E-27 T 11-11-2016 SHALO_RS08975 b6986a9438732ef7911c6bdd4c042a9e 719 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 611 630 3.8E-27 T 11-11-2016 SHALO_RS08975 b6986a9438732ef7911c6bdd4c042a9e 719 Pfam PF00702 haloacid dehalogenase-like hydrolase 412 625 9.0E-44 T 11-11-2016 SHALO_RS08975 b6986a9438732ef7911c6bdd4c042a9e 719 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 136 714 7.0E-177 T 11-11-2016 SHALO_RS08975 b6986a9438732ef7911c6bdd4c042a9e 719 Gene3D G3DSA:3.40.1110.10 430 538 2.7E-14 T 11-11-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 SHALO_RS08975 b6986a9438732ef7911c6bdd4c042a9e 719 Gene3D G3DSA:2.70.150.10 153 317 2.9E-32 T 11-11-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 SHALO_RS08975 b6986a9438732ef7911c6bdd4c042a9e 719 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 154 713 9.3E-186 T 11-11-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 SHALO_RS08975 b6986a9438732ef7911c6bdd4c042a9e 719 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 190 690 1.7E-95 T 11-11-2016 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 SHALO_RS08975 b6986a9438732ef7911c6bdd4c042a9e 719 SUPERFAMILY SSF56784 471 711 3.75E-58 T 11-11-2016 IPR023214 HAD-like domain SHALO_RS08975 b6986a9438732ef7911c6bdd4c042a9e 719 SUPERFAMILY SSF56784 415 434 3.75E-58 T 11-11-2016 IPR023214 HAD-like domain SHALO_RS08975 b6986a9438732ef7911c6bdd4c042a9e 719 Gene3D G3DSA:3.40.50.1000 539 680 1.5E-53 T 11-11-2016 IPR023214 HAD-like domain SHALO_RS08975 b6986a9438732ef7911c6bdd4c042a9e 719 Gene3D G3DSA:3.40.50.1000 387 429 1.5E-53 T 11-11-2016 IPR023214 HAD-like domain SHALO_RS08975 b6986a9438732ef7911c6bdd4c042a9e 719 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 418 424 - T 11-11-2016 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 SHALO_RS08975 b6986a9438732ef7911c6bdd4c042a9e 719 Gene3D G3DSA:3.30.70.100 5 83 2.8E-19 T 11-11-2016 SHALO_RS08975 b6986a9438732ef7911c6bdd4c042a9e 719 Pfam PF00122 E1-E2 ATPase 189 407 4.1E-67 T 11-11-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 SHALO_RS03805 54e428aaa9cd8872c09cc3933f1b3fcb 206 Pfam PF01634 ATP phosphoribosyltransferase 47 199 5.5E-50 T 11-11-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 SHALO_RS03805 54e428aaa9cd8872c09cc3933f1b3fcb 206 SUPERFAMILY SSF53850 1 202 1.41E-61 T 11-11-2016 SHALO_RS03805 54e428aaa9cd8872c09cc3933f1b3fcb 206 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 2 179 2.1E-58 T 11-11-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 SHALO_RS03805 54e428aaa9cd8872c09cc3933f1b3fcb 206 Gene3D G3DSA:3.40.190.10 109 173 5.9E-29 T 11-11-2016 SHALO_RS03805 54e428aaa9cd8872c09cc3933f1b3fcb 206 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 138 159 - T 11-11-2016 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 SHALO_RS03805 54e428aaa9cd8872c09cc3933f1b3fcb 206 Gene3D G3DSA:3.40.190.10 1 108 1.2E-29 T 11-11-2016 SHALO_RS03805 54e428aaa9cd8872c09cc3933f1b3fcb 206 Hamap MF_01018 ATP phosphoribosyltransferase [hisG]. 1 203 49.757 T 11-11-2016 IPR024893 ATP phosphoribosyltransferase HisG, short form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 SHALO_RS12215 f608bc53a08e13d75a07585f48342ef0 276 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 1.5E-30 T 11-11-2016 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_RS12215 f608bc53a08e13d75a07585f48342ef0 276 Gene3D G3DSA:4.10.950.10 197 274 3.2E-32 T 11-11-2016 IPR014726 Ribosomal protein L2, domain 3 SHALO_RS12215 f608bc53a08e13d75a07585f48342ef0 276 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 126 251 2.8E-56 T 11-11-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 SHALO_RS12215 f608bc53a08e13d75a07585f48342ef0 276 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 274 5.9E-130 T 11-11-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS12215 f608bc53a08e13d75a07585f48342ef0 276 SUPERFAMILY SSF50249 2 119 3.29E-41 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold SHALO_RS12215 f608bc53a08e13d75a07585f48342ef0 276 Gene3D G3DSA:2.30.30.30 123 196 2.6E-34 T 11-11-2016 IPR014722 Ribosomal protein L2 domain 2 SHALO_RS12215 f608bc53a08e13d75a07585f48342ef0 276 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 274 44.996 T 11-11-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS12215 f608bc53a08e13d75a07585f48342ef0 276 SUPERFAMILY SSF50104 127 273 1.08E-60 T 11-11-2016 IPR008991 Translation protein SH3-like domain SHALO_RS12215 f608bc53a08e13d75a07585f48342ef0 276 PIRSF PIRSF002158 13 276 1.7E-95 T 11-11-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_RS12215 f608bc53a08e13d75a07585f48342ef0 276 ProSitePatterns PS00467 Ribosomal protein L2 signature. 219 230 - T 11-11-2016 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_RS12215 f608bc53a08e13d75a07585f48342ef0 276 SMART SM01382 125 253 1.0E-90 T 11-11-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 SHALO_RS12215 f608bc53a08e13d75a07585f48342ef0 276 Gene3D G3DSA:2.40.50.140 1 114 2.1E-44 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold SHALO_RS12215 f608bc53a08e13d75a07585f48342ef0 276 SMART SM01383 42 118 8.4E-44 T 11-11-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_RS04515 1e44c6dedb36f9a83dfbc7d174993597 616 SUPERFAMILY SSF56425 272 390 1.12E-37 T 11-11-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_RS04515 1e44c6dedb36f9a83dfbc7d174993597 616 Gene3D G3DSA:4.10.80.40 571 610 1.3E-14 T 11-11-2016 SHALO_RS04515 1e44c6dedb36f9a83dfbc7d174993597 616 Pfam PF02910 Fumarate reductase flavoprotein C-term 490 616 2.1E-30 T 11-11-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_RS04515 1e44c6dedb36f9a83dfbc7d174993597 616 SUPERFAMILY SSF51905 394 455 4.12E-68 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHALO_RS04515 1e44c6dedb36f9a83dfbc7d174993597 616 SUPERFAMILY SSF51905 38 294 4.12E-68 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHALO_RS04515 1e44c6dedb36f9a83dfbc7d174993597 616 Gene3D G3DSA:3.50.50.60 386 453 2.3E-91 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHALO_RS04515 1e44c6dedb36f9a83dfbc7d174993597 616 Gene3D G3DSA:3.50.50.60 45 277 2.3E-91 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHALO_RS04515 1e44c6dedb36f9a83dfbc7d174993597 616 Gene3D G3DSA:3.90.700.10 278 384 3.8E-36 T 11-11-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_RS04515 1e44c6dedb36f9a83dfbc7d174993597 616 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 49 616 1.4E-194 T 11-11-2016 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_RS04515 1e44c6dedb36f9a83dfbc7d174993597 616 Pfam PF00890 FAD binding domain 49 432 5.7E-94 T 11-11-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_RS04515 1e44c6dedb36f9a83dfbc7d174993597 616 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 50 69 3.5E-6 T 11-11-2016 SHALO_RS04515 1e44c6dedb36f9a83dfbc7d174993597 616 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 395 417 3.5E-6 T 11-11-2016 SHALO_RS04515 1e44c6dedb36f9a83dfbc7d174993597 616 SUPERFAMILY SSF46977 483 616 1.19E-35 T 11-11-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_RS04515 1e44c6dedb36f9a83dfbc7d174993597 616 PIRSF PIRSF000171 40 613 3.5E-41 T 11-11-2016 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_RS04515 1e44c6dedb36f9a83dfbc7d174993597 616 Gene3D G3DSA:1.20.58.100 482 570 1.3E-24 T 11-11-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_RS07840 467aa0f1987f2b88443cb993b28a8b26 800 Gene3D G3DSA:1.20.1330.10 705 757 3.8E-17 T 11-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SHALO_RS07840 467aa0f1987f2b88443cb993b28a8b26 800 Gene3D G3DSA:1.20.1330.10 53 137 3.8E-17 T 11-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SHALO_RS07840 467aa0f1987f2b88443cb993b28a8b26 800 Gene3D G3DSA:1.20.1330.10 312 313 3.8E-17 T 11-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SHALO_RS07840 467aa0f1987f2b88443cb993b28a8b26 800 Pfam PF00700 Bacterial flagellin C-terminal helical region 718 799 6.5E-6 T 11-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SHALO_RS07840 467aa0f1987f2b88443cb993b28a8b26 800 SUPERFAMILY SSF64518 1 183 2.48E-42 T 11-11-2016 SHALO_RS07840 467aa0f1987f2b88443cb993b28a8b26 800 SUPERFAMILY SSF64518 674 800 2.48E-42 T 11-11-2016 SHALO_RS07840 467aa0f1987f2b88443cb993b28a8b26 800 SUPERFAMILY SSF64518 342 375 2.48E-42 T 11-11-2016 SHALO_RS07840 467aa0f1987f2b88443cb993b28a8b26 800 SUPERFAMILY SSF64518 256 298 2.48E-42 T 11-11-2016 SHALO_RS07840 467aa0f1987f2b88443cb993b28a8b26 800 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 138 2.4E-17 T 11-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SHALO_RS14050 5a91c8a6ca404d51bfe5d8579d77915d 132 SUPERFAMILY SSF46689 6 80 4.66E-7 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 SHALO_RS14050 5a91c8a6ca404d51bfe5d8579d77915d 132 Gene3D G3DSA:1.10.10.10 7 63 1.6E-6 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS14050 5a91c8a6ca404d51bfe5d8579d77915d 132 Pfam PF01527 Transposase 7 82 1.1E-5 T 11-11-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SHALO_RS06780 4763424ee1d2c3ad2babf8b8e25a4ebe 209 Gene3D G3DSA:3.40.109.10 2 208 4.7E-69 T 11-11-2016 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 SHALO_RS06780 4763424ee1d2c3ad2babf8b8e25a4ebe 209 SUPERFAMILY SSF55469 4 206 1.27E-56 T 11-11-2016 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 SHALO_RS06780 4763424ee1d2c3ad2babf8b8e25a4ebe 209 Pfam PF00881 Nitroreductase family 10 188 2.9E-32 T 11-11-2016 IPR029479 Nitroreductase Reactome: R-HSA-209968 SHALO_RS01265 9d599b561a23130cfd548b9d077e4778 304 Gene3D G3DSA:3.20.20.220 3 303 1.1E-37 T 11-11-2016 IPR029041 FAD-linked oxidoreductase-like SHALO_RS01265 9d599b561a23130cfd548b9d077e4778 304 SUPERFAMILY SSF51730 13 303 6.87E-39 T 11-11-2016 IPR029041 FAD-linked oxidoreductase-like SHALO_RS01265 9d599b561a23130cfd548b9d077e4778 304 Pfam PF02219 Methylenetetrahydrofolate reductase 62 302 3.4E-17 T 11-11-2016 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 SHALO_RS12460 52fd7d0f437bc20d427749173074b628 431 Gene3D G3DSA:2.60.40.650 301 418 2.6E-23 T 11-11-2016 IPR005066 Moybdenum cofactor oxidoreductase, dimerisation GO:0016491|GO:0030151|GO:0055114 Reactome: R-HSA-1614517 SHALO_RS12460 52fd7d0f437bc20d427749173074b628 431 PRINTS PR00407 Eukaryotic molybdopterin domain signature 258 271 4.0E-15 T 11-11-2016 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 SHALO_RS12460 52fd7d0f437bc20d427749173074b628 431 PRINTS PR00407 Eukaryotic molybdopterin domain signature 338 350 4.0E-15 T 11-11-2016 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 SHALO_RS12460 52fd7d0f437bc20d427749173074b628 431 PRINTS PR00407 Eukaryotic molybdopterin domain signature 179 194 4.0E-15 T 11-11-2016 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 SHALO_RS12460 52fd7d0f437bc20d427749173074b628 431 PRINTS PR00407 Eukaryotic molybdopterin domain signature 242 255 4.0E-15 T 11-11-2016 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 SHALO_RS12460 52fd7d0f437bc20d427749173074b628 431 PRINTS PR00407 Eukaryotic molybdopterin domain signature 102 118 4.0E-15 T 11-11-2016 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 SHALO_RS12460 52fd7d0f437bc20d427749173074b628 431 SUPERFAMILY SSF56524 64 292 1.31E-62 T 11-11-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 SHALO_RS12460 52fd7d0f437bc20d427749173074b628 431 SUPERFAMILY SSF81296 301 417 1.54E-25 T 11-11-2016 IPR014756 Immunoglobulin E-set SHALO_RS12460 52fd7d0f437bc20d427749173074b628 431 Pfam PF00174 Oxidoreductase molybdopterin binding domain 114 273 5.0E-47 T 11-11-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 SHALO_RS12460 52fd7d0f437bc20d427749173074b628 431 Gene3D G3DSA:3.90.420.10 64 295 1.5E-63 T 11-11-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 SHALO_RS12460 52fd7d0f437bc20d427749173074b628 431 Pfam PF03404 Mo-co oxidoreductase dimerisation domain 298 414 7.3E-14 T 11-11-2016 IPR005066 Moybdenum cofactor oxidoreductase, dimerisation GO:0016491|GO:0030151|GO:0055114 Reactome: R-HSA-1614517 SHALO_RS12460 52fd7d0f437bc20d427749173074b628 431 TIGRFAM TIGR04555 sulfite_DH_soxC: sulfite dehydrogenase 10 426 5.8E-180 T 11-11-2016 IPR030835 Sulfite dehydrogenase SoxC SHALO_RS08940 02ad6b4ec29e557b0fd64236063825e2 442 Gene3D G3DSA:3.40.50.300 341 396 4.2E-18 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS08940 02ad6b4ec29e557b0fd64236063825e2 442 Gene3D G3DSA:3.40.50.300 139 241 4.2E-18 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS08940 02ad6b4ec29e557b0fd64236063825e2 442 Pfam PF05970 PIF1-like helicase 13 179 1.7E-22 T 11-11-2016 IPR010285 DNA helicase Pif1-like GO:0000723|GO:0003678|GO:0006281 SHALO_RS08940 02ad6b4ec29e557b0fd64236063825e2 442 SUPERFAMILY SSF52540 9 142 7.54E-25 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS08940 02ad6b4ec29e557b0fd64236063825e2 442 SUPERFAMILY SSF52540 338 414 5.54E-30 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS08940 02ad6b4ec29e557b0fd64236063825e2 442 SUPERFAMILY SSF52540 127 306 5.54E-30 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS08940 02ad6b4ec29e557b0fd64236063825e2 442 Pfam PF02689 Helicase 343 399 2.2E-5 T 11-11-2016 IPR003840 DNA helicase GO:0004386|GO:0005524 SHALO_RS08940 02ad6b4ec29e557b0fd64236063825e2 442 Gene3D G3DSA:3.40.50.300 9 138 4.3E-9 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS05590 df256dbec0b41ddcd1ddc1353615622f 433 Gene3D G3DSA:3.30.830.10 245 416 1.6E-30 T 11-11-2016 IPR011237 Peptidase M16 domain GO:0046872 SHALO_RS05590 df256dbec0b41ddcd1ddc1353615622f 433 Pfam PF05193 Peptidase M16 inactive domain 187 361 1.9E-26 T 11-11-2016 IPR007863 Peptidase M16, C-terminal SHALO_RS05590 df256dbec0b41ddcd1ddc1353615622f 433 Gene3D G3DSA:3.30.830.10 33 232 3.4E-31 T 11-11-2016 IPR011237 Peptidase M16 domain GO:0046872 SHALO_RS05590 df256dbec0b41ddcd1ddc1353615622f 433 SUPERFAMILY SSF63411 246 432 2.0E-36 T 11-11-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 SHALO_RS05590 df256dbec0b41ddcd1ddc1353615622f 433 SUPERFAMILY SSF63411 32 223 6.5E-33 T 11-11-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 SHALO_RS05590 df256dbec0b41ddcd1ddc1353615622f 433 Pfam PF00675 Insulinase (Peptidase family M16) 34 174 9.0E-13 T 11-11-2016 IPR011765 Peptidase M16, N-terminal SHALO_RS07060 e69ae159e83d01e75b5e50cd7c5a6224 225 Pfam PF01292 Prokaryotic cytochrome b561 9 215 2.4E-27 T 11-11-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 SHALO_RS07060 e69ae159e83d01e75b5e50cd7c5a6224 225 TIGRFAM TIGR02125 CytB-hydogenase: Ni/Fe-hydrogenase, b-type cytochrome subunit 8 220 9.9E-75 T 11-11-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 SHALO_RS07060 e69ae159e83d01e75b5e50cd7c5a6224 225 Gene3D G3DSA:1.20.950.20 8 223 1.9E-36 T 11-11-2016 SHALO_RS07060 e69ae159e83d01e75b5e50cd7c5a6224 225 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 11 34 4.1E-26 T 11-11-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 SHALO_RS07060 e69ae159e83d01e75b5e50cd7c5a6224 225 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 207 220 4.1E-26 T 11-11-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 SHALO_RS07060 e69ae159e83d01e75b5e50cd7c5a6224 225 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 176 198 4.1E-26 T 11-11-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 SHALO_RS07060 e69ae159e83d01e75b5e50cd7c5a6224 225 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 126 145 4.1E-26 T 11-11-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 SHALO_RS07060 e69ae159e83d01e75b5e50cd7c5a6224 225 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 50 74 4.1E-26 T 11-11-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 SHALO_RS07060 e69ae159e83d01e75b5e50cd7c5a6224 225 ProSitePatterns PS00882 Nickel-dependent hydrogenases b-type cytochrome subunit signature 1. 14 31 - T 11-11-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 SHALO_RS07060 e69ae159e83d01e75b5e50cd7c5a6224 225 SUPERFAMILY SSF81342 8 225 2.04E-33 T 11-11-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 SHALO_RS14800 bf50b905c90ad8202c63782c99f68ed8 416 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 14 406 2.4E-100 T 11-11-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 SHALO_RS14800 bf50b905c90ad8202c63782c99f68ed8 416 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 330 350 - T 11-11-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 SHALO_RS14800 bf50b905c90ad8202c63782c99f68ed8 416 Pfam PF00860 Permease family 14 385 8.3E-79 T 11-11-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 SHALO_RS00965 cc86156276876e769528a3f7969a3d6a 204 SUPERFAMILY SSF54862 64 163 6.28E-21 T 11-11-2016 SHALO_RS00965 cc86156276876e769528a3f7969a3d6a 204 Gene3D G3DSA:3.30.70.20 54 147 1.6E-16 T 11-11-2016 SHALO_RS00965 cc86156276876e769528a3f7969a3d6a 204 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 37 195 25.138 T 11-11-2016 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS00965 cc86156276876e769528a3f7969a3d6a 204 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 46 168 6.0E-40 T 11-11-2016 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS00965 cc86156276876e769528a3f7969a3d6a 204 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 131 142 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_RS00965 cc86156276876e769528a3f7969a3d6a 204 Pfam PF12838 4Fe-4S dicluster domain 91 143 2.8E-10 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_RS10095 ffe44fa5acb63a0d0491de031c372b87 199 Gene3D G3DSA:3.40.30.10 1 197 6.1E-19 T 11-11-2016 IPR012336 Thioredoxin-like fold SHALO_RS10095 ffe44fa5acb63a0d0491de031c372b87 199 ProSitePatterns PS00194 Thioredoxin family active site. 69 87 - T 11-11-2016 IPR017937 Thioredoxin, conserved site GO:0045454 SHALO_RS10095 ffe44fa5acb63a0d0491de031c372b87 199 SUPERFAMILY SSF52833 1 169 3.66E-13 T 11-11-2016 IPR012336 Thioredoxin-like fold SHALO_RS05630 913aed8fdafb25e882a272f70b008a49 215 Pfam PF13525 Outer membrane lipoprotein 29 182 5.0E-20 T 11-11-2016 SHALO_RS05630 913aed8fdafb25e882a272f70b008a49 215 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 6 183 5.5E-26 T 11-11-2016 IPR017689 Outer membrane protein assembly factor BamD SHALO_RS12905 45d7255a5052dea8e4af3f7a71493010 95 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 11 92 8.0E-11 T 11-11-2016 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family SHALO_RS12905 45d7255a5052dea8e4af3f7a71493010 95 SUPERFAMILY SSF143011 9 91 1.31E-20 T 11-11-2016 SHALO_RS12905 45d7255a5052dea8e4af3f7a71493010 95 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 11 92 2.1E-12 T 11-11-2016 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family SHALO_RS05890 19981c64e493da71f40b5914cf3f2519 259 Pfam PF00145 C-5 cytosine-specific DNA methylase 35 103 6.1E-8 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS05890 19981c64e493da71f40b5914cf3f2519 259 Gene3D G3DSA:3.90.120.10 167 201 3.7E-4 T 11-11-2016 SHALO_RS05890 19981c64e493da71f40b5914cf3f2519 259 SUPERFAMILY SSF53335 5 212 3.05E-23 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS05890 19981c64e493da71f40b5914cf3f2519 259 Gene3D G3DSA:3.40.50.150 4 153 6.8E-12 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS10295 b18505695426050c37823a79d862a549 184 PIRSF PIRSF006305 1 184 1.8E-37 T 11-11-2016 IPR003697 Maf-like protein GO:0005737 SHALO_RS10295 b18505695426050c37823a79d862a549 184 Gene3D G3DSA:3.90.950.10 2 182 4.6E-38 T 11-11-2016 IPR029001 Inosine triphosphate pyrophosphatase-like SHALO_RS10295 b18505695426050c37823a79d862a549 184 SUPERFAMILY SSF52972 2 182 2.62E-38 T 11-11-2016 IPR029001 Inosine triphosphate pyrophosphatase-like SHALO_RS10295 b18505695426050c37823a79d862a549 184 TIGRFAM TIGR00172 maf: septum formation protein Maf 2 182 1.8E-39 T 11-11-2016 IPR003697 Maf-like protein GO:0005737 SHALO_RS10295 b18505695426050c37823a79d862a549 184 Pfam PF02545 Maf-like protein 4 182 1.7E-27 T 11-11-2016 IPR003697 Maf-like protein GO:0005737 SHALO_RS06825 d6441c29210fad5dea5fbc47a892e9d9 431 Gene3D G3DSA:3.30.300.30 323 429 1.2E-34 T 11-11-2016 SHALO_RS06825 d6441c29210fad5dea5fbc47a892e9d9 431 PIRSF PIRSF006444 1 431 3.6E-197 T 11-11-2016 IPR011880 Phenylacetate-CoA ligase GO:0010124|GO:0047475 KEGG: 00360+6.2.1.30|MetaCyc: PWY-1341|MetaCyc: PWY-6318|MetaCyc: PWY-7716 SHALO_RS06825 d6441c29210fad5dea5fbc47a892e9d9 431 SUPERFAMILY SSF56801 18 393 1.1E-57 T 11-11-2016 SHALO_RS06825 d6441c29210fad5dea5fbc47a892e9d9 431 Gene3D G3DSA:3.40.50.980 82 239 2.4E-14 T 11-11-2016 SHALO_RS06825 d6441c29210fad5dea5fbc47a892e9d9 431 Pfam PF14535 AMP-binding enzyme C-terminal domain 333 429 1.9E-29 T 11-11-2016 IPR028154 AMP-dependent ligase, C-terminal SHALO_RS06825 d6441c29210fad5dea5fbc47a892e9d9 431 Pfam PF00501 AMP-binding enzyme 75 285 9.5E-14 T 11-11-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 SHALO_RS09960 3c3cb5624599b0c3f0cc9992705e5323 658 Pfam PF04851 Type III restriction enzyme, res subunit 15 118 1.7E-11 T 11-11-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 SHALO_RS09960 3c3cb5624599b0c3f0cc9992705e5323 658 Hamap MF_00204 UvrABC system protein B [uvrB]. 2 658 41.328 T 11-11-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 SHALO_RS09960 3c3cb5624599b0c3f0cc9992705e5323 658 Gene3D G3DSA:3.40.50.300 6 88 4.6E-45 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS09960 3c3cb5624599b0c3f0cc9992705e5323 658 Gene3D G3DSA:3.40.50.300 390 405 4.6E-45 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS09960 3c3cb5624599b0c3f0cc9992705e5323 658 Gene3D G3DSA:3.40.50.300 277 340 4.6E-45 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS09960 3c3cb5624599b0c3f0cc9992705e5323 658 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 3 656 1.9E-299 T 11-11-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 SHALO_RS09960 3c3cb5624599b0c3f0cc9992705e5323 658 SUPERFAMILY SSF52540 3 417 7.88E-126 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS09960 3c3cb5624599b0c3f0cc9992705e5323 658 Pfam PF12344 Ultra-violet resistance protein B 554 595 4.8E-18 T 11-11-2016 IPR024759 UvrB, YAD/RRR-motif-containing domain SHALO_RS09960 3c3cb5624599b0c3f0cc9992705e5323 658 SMART SM00490 462 548 1.1E-18 T 11-11-2016 IPR001650 Helicase, C-terminal SHALO_RS09960 3c3cb5624599b0c3f0cc9992705e5323 658 Gene3D G3DSA:4.10.860.10 606 658 3.5E-15 T 11-11-2016 IPR001943 UVR domain GO:0005515 SHALO_RS09960 3c3cb5624599b0c3f0cc9992705e5323 658 SMART SM00487 8 428 8.0E-25 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SHALO_RS09960 3c3cb5624599b0c3f0cc9992705e5323 658 Pfam PF00271 Helicase conserved C-terminal domain 444 547 2.4E-19 T 11-11-2016 IPR001650 Helicase, C-terminal SHALO_RS09960 3c3cb5624599b0c3f0cc9992705e5323 658 Gene3D G3DSA:3.30.2060.10 160 228 1.0E-11 T 11-11-2016 SHALO_RS09960 3c3cb5624599b0c3f0cc9992705e5323 658 Pfam PF02151 UvrB/uvrC motif 623 657 2.4E-10 T 11-11-2016 IPR001943 UVR domain GO:0005515 SHALO_RS09960 3c3cb5624599b0c3f0cc9992705e5323 658 Gene3D G3DSA:3.40.50.300 421 584 6.4E-39 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS09960 3c3cb5624599b0c3f0cc9992705e5323 658 SUPERFAMILY SSF52540 34 79 1.01E-35 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS09960 3c3cb5624599b0c3f0cc9992705e5323 658 SUPERFAMILY SSF52540 472 590 1.01E-35 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS09960 3c3cb5624599b0c3f0cc9992705e5323 658 SUPERFAMILY SSF46600 612 657 5.1E-11 T 11-11-2016 IPR001943 UVR domain GO:0005515 SHALO_RS01995 d946007d90c2f4ecfcbe9145fa554407 597 Gene3D G3DSA:3.30.70.870 296 370 2.0E-22 T 11-11-2016 SHALO_RS01995 d946007d90c2f4ecfcbe9145fa554407 597 Gene3D G3DSA:3.40.50.300 2 192 9.4E-60 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS01995 d946007d90c2f4ecfcbe9145fa554407 597 Pfam PF00679 Elongation factor G C-terminus 400 485 9.7E-22 T 11-11-2016 IPR000640 Translation elongation factor EFG, V domain SHALO_RS01995 d946007d90c2f4ecfcbe9145fa554407 597 Gene3D G3DSA:2.40.30.10 193 291 2.8E-26 T 11-11-2016 SHALO_RS01995 d946007d90c2f4ecfcbe9145fa554407 597 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 43 58 - T 11-11-2016 IPR031157 Tr-type G domain, conserved site SHALO_RS01995 d946007d90c2f4ecfcbe9145fa554407 597 Pfam PF03144 Elongation factor Tu domain 2 205 276 5.5E-13 T 11-11-2016 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 SHALO_RS01995 d946007d90c2f4ecfcbe9145fa554407 597 Gene3D G3DSA:3.30.70.240 402 489 3.6E-19 T 11-11-2016 IPR000640 Translation elongation factor EFG, V domain SHALO_RS01995 d946007d90c2f4ecfcbe9145fa554407 597 Hamap MF_00071 Elongation factor 4 [lepA]. 1 597 283.883 T 11-11-2016 IPR006297 Elongation factor 4 GO:0005525 SHALO_RS01995 d946007d90c2f4ecfcbe9145fa554407 597 PRINTS PR00315 GTP-binding elongation factor signature 50 58 1.9E-15 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SHALO_RS01995 d946007d90c2f4ecfcbe9145fa554407 597 PRINTS PR00315 GTP-binding elongation factor signature 126 135 1.9E-15 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SHALO_RS01995 d946007d90c2f4ecfcbe9145fa554407 597 PRINTS PR00315 GTP-binding elongation factor signature 90 101 1.9E-15 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SHALO_RS01995 d946007d90c2f4ecfcbe9145fa554407 597 PRINTS PR00315 GTP-binding elongation factor signature 74 84 1.9E-15 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SHALO_RS01995 d946007d90c2f4ecfcbe9145fa554407 597 PRINTS PR00315 GTP-binding elongation factor signature 7 20 1.9E-15 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SHALO_RS01995 d946007d90c2f4ecfcbe9145fa554407 597 SUPERFAMILY SSF54980 295 371 1.26E-15 T 11-11-2016 IPR009022 Elongation factor G, III-V domain SHALO_RS01995 d946007d90c2f4ecfcbe9145fa554407 597 Pfam PF00009 Elongation factor Tu GTP binding domain 3 181 2.1E-54 T 11-11-2016 SHALO_RS01995 d946007d90c2f4ecfcbe9145fa554407 597 TIGRFAM TIGR01393 lepA: elongation factor 4 3 597 2.9E-294 T 11-11-2016 IPR006297 Elongation factor 4 GO:0005525 SHALO_RS01995 d946007d90c2f4ecfcbe9145fa554407 597 Pfam PF06421 GTP-binding protein LepA C-terminus 489 595 1.7E-46 T 11-11-2016 IPR013842 GTP-binding protein LepA, C-terminal SHALO_RS01995 d946007d90c2f4ecfcbe9145fa554407 597 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 7 173 3.9E-20 T 11-11-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SHALO_RS01995 d946007d90c2f4ecfcbe9145fa554407 597 SUPERFAMILY SSF50447 166 289 9.86E-32 T 11-11-2016 IPR009000 Translation protein, beta-barrel domain SHALO_RS01995 d946007d90c2f4ecfcbe9145fa554407 597 SUPERFAMILY SSF54980 400 495 7.67E-23 T 11-11-2016 IPR009022 Elongation factor G, III-V domain SHALO_RS01995 d946007d90c2f4ecfcbe9145fa554407 597 SUPERFAMILY SSF52540 2 205 5.81E-57 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS14740 9b8ad4a94d68fd117a9e544c8a2f615a 347 Gene3D G3DSA:3.40.50.300 33 270 1.6E-78 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS14740 9b8ad4a94d68fd117a9e544c8a2f615a 347 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 6 327 3.4E-169 T 11-11-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SHALO_RS14740 9b8ad4a94d68fd117a9e544c8a2f615a 347 Pfam PF00154 recA bacterial DNA recombination protein 9 271 2.4E-136 T 11-11-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SHALO_RS14740 9b8ad4a94d68fd117a9e544c8a2f615a 347 Hamap MF_00268 Protein RecA [recA]. 7 332 50.992 T 11-11-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SHALO_RS14740 9b8ad4a94d68fd117a9e544c8a2f615a 347 ProSitePatterns PS00321 recA signature. 216 224 - T 11-11-2016 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 SHALO_RS14740 9b8ad4a94d68fd117a9e544c8a2f615a 347 SMART SM00382 59 231 1.9E-13 T 11-11-2016 IPR003593 AAA+ ATPase domain SHALO_RS14740 9b8ad4a94d68fd117a9e544c8a2f615a 347 SUPERFAMILY SSF54752 271 329 1.1E-20 T 11-11-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal SHALO_RS14740 9b8ad4a94d68fd117a9e544c8a2f615a 347 PRINTS PR00142 RecA protein signature 95 124 6.3E-84 T 11-11-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SHALO_RS14740 9b8ad4a94d68fd117a9e544c8a2f615a 347 PRINTS PR00142 RecA protein signature 129 158 6.3E-84 T 11-11-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SHALO_RS14740 9b8ad4a94d68fd117a9e544c8a2f615a 347 PRINTS PR00142 RecA protein signature 300 317 6.3E-84 T 11-11-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SHALO_RS14740 9b8ad4a94d68fd117a9e544c8a2f615a 347 PRINTS PR00142 RecA protein signature 246 275 6.3E-84 T 11-11-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SHALO_RS14740 9b8ad4a94d68fd117a9e544c8a2f615a 347 PRINTS PR00142 RecA protein signature 167 196 6.3E-84 T 11-11-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SHALO_RS14740 9b8ad4a94d68fd117a9e544c8a2f615a 347 PRINTS PR00142 RecA protein signature 213 241 6.3E-84 T 11-11-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SHALO_RS14740 9b8ad4a94d68fd117a9e544c8a2f615a 347 Gene3D G3DSA:3.30.250.10 271 329 5.0E-27 T 11-11-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal SHALO_RS14740 9b8ad4a94d68fd117a9e544c8a2f615a 347 SUPERFAMILY SSF52540 6 270 2.97E-62 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS11215 e7543fff135d81c7370aedbff8aa92f3 456 SUPERFAMILY SSF53738 3 177 2.5E-30 T 11-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHALO_RS11215 e7543fff135d81c7370aedbff8aa92f3 456 Gene3D G3DSA:3.40.120.10 3 135 1.7E-29 T 11-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHALO_RS11215 e7543fff135d81c7370aedbff8aa92f3 456 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 96 105 - T 11-11-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHALO_RS11215 e7543fff135d81c7370aedbff8aa92f3 456 Gene3D G3DSA:3.30.310.50 361 452 4.2E-25 T 11-11-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHALO_RS11215 e7543fff135d81c7370aedbff8aa92f3 456 SUPERFAMILY SSF55957 361 450 1.83E-18 T 11-11-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHALO_RS11215 e7543fff135d81c7370aedbff8aa92f3 456 SUPERFAMILY SSF53738 153 254 3.61E-23 T 11-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHALO_RS11215 e7543fff135d81c7370aedbff8aa92f3 456 Gene3D G3DSA:3.40.120.10 174 247 5.9E-23 T 11-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHALO_RS11215 e7543fff135d81c7370aedbff8aa92f3 456 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 256 349 1.5E-15 T 11-11-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHALO_RS11215 e7543fff135d81c7370aedbff8aa92f3 456 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 367 447 7.9E-10 T 11-11-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHALO_RS11215 e7543fff135d81c7370aedbff8aa92f3 456 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 116 2.8E-25 T 11-11-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHALO_RS11215 e7543fff135d81c7370aedbff8aa92f3 456 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 95 109 2.3E-20 T 11-11-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHALO_RS11215 e7543fff135d81c7370aedbff8aa92f3 456 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 170 189 2.3E-20 T 11-11-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHALO_RS11215 e7543fff135d81c7370aedbff8aa92f3 456 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 232 247 2.3E-20 T 11-11-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHALO_RS11215 e7543fff135d81c7370aedbff8aa92f3 456 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 204 217 2.3E-20 T 11-11-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHALO_RS11215 e7543fff135d81c7370aedbff8aa92f3 456 SUPERFAMILY SSF53738 258 345 9.42E-20 T 11-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHALO_RS11215 e7543fff135d81c7370aedbff8aa92f3 456 Gene3D G3DSA:3.40.120.10 253 358 2.8E-26 T 11-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHALO_RS11215 e7543fff135d81c7370aedbff8aa92f3 456 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 154 250 4.8E-18 T 11-11-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHALO_RS11975 edd8cf1ee0ecc94963dc3bc2d5c5b67d 71 Pfam PF05545 Cbb3-type cytochrome oxidase component FixQ 4 53 7.0E-16 T 11-11-2016 IPR008621 Cbb3-type cytochrome oxidase component SHALO_RS11975 edd8cf1ee0ecc94963dc3bc2d5c5b67d 71 TIGRFAM TIGR02736 cbb3_Q_epsi: cytochrome c oxidase, cbb3-type, CcoQ subunit 11 64 2.1E-25 T 11-11-2016 IPR014107 Cytochrome c oxidase cbb3-type, CcoQ SHALO_RS02655 6ba35ab5031f43bdb1490878f2f303bc 142 Pfam PF10571 Uncharacterised protein family UPF0547 118 138 1.4E-8 T 11-11-2016 IPR018886 Uncharacterised domain UPF0547 SHALO_RS02655 6ba35ab5031f43bdb1490878f2f303bc 142 SUPERFAMILY SSF81330 10 127 2.75E-28 T 11-11-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 SHALO_RS02655 6ba35ab5031f43bdb1490878f2f303bc 142 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 1 120 9.3E-33 T 11-11-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 SHALO_RS02655 6ba35ab5031f43bdb1490878f2f303bc 142 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 1 119 2.9E-29 T 11-11-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 SHALO_RS02655 6ba35ab5031f43bdb1490878f2f303bc 142 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 89 97 4.2E-8 T 11-11-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 SHALO_RS02655 6ba35ab5031f43bdb1490878f2f303bc 142 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 4 18 4.2E-8 T 11-11-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 SHALO_RS02655 6ba35ab5031f43bdb1490878f2f303bc 142 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 98 107 4.2E-8 T 11-11-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 SHALO_RS09845 ee63f231e680302328ff3bf58a6d3b50 330 Gene3D G3DSA:3.75.10.10 2 325 6.6E-111 T 11-11-2016 SHALO_RS09845 ee63f231e680302328ff3bf58a6d3b50 330 SUPERFAMILY SSF55909 2 324 1.46E-104 T 11-11-2016 SHALO_RS09845 ee63f231e680302328ff3bf58a6d3b50 330 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 4 323 6.0E-100 T 11-11-2016 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 SHALO_RS07165 a9bc70849e80e5a19cff8bd5d33a51f7 105 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 19 30 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_RS07165 a9bc70849e80e5a19cff8bd5d33a51f7 105 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 56 67 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_RS07165 a9bc70849e80e5a19cff8bd5d33a51f7 105 Pfam PF12838 4Fe-4S dicluster domain 18 67 3.9E-8 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_RS07165 a9bc70849e80e5a19cff8bd5d33a51f7 105 SUPERFAMILY SSF54862 8 88 1.15E-17 T 11-11-2016 SHALO_RS07165 a9bc70849e80e5a19cff8bd5d33a51f7 105 Gene3D G3DSA:3.30.70.20 13 80 8.8E-14 T 11-11-2016 SHALO_RS13210 630524060d86c91dc28a8686a426618b 668 Pfam PF00593 TonB dependent receptor 427 667 2.4E-19 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SHALO_RS13210 630524060d86c91dc28a8686a426618b 668 Pfam PF07715 TonB-dependent Receptor Plug Domain 37 123 1.2E-6 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SHALO_RS13210 630524060d86c91dc28a8686a426618b 668 Gene3D G3DSA:2.40.170.20 136 668 2.5E-66 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SHALO_RS13210 630524060d86c91dc28a8686a426618b 668 Gene3D G3DSA:2.170.130.10 23 135 3.6E-8 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SHALO_RS13210 630524060d86c91dc28a8686a426618b 668 SUPERFAMILY SSF56935 24 668 1.03E-81 T 11-11-2016 SHALO_RS00825 c356a1966d28345e52ecacbc4187e7bf 339 SUPERFAMILY SSF51430 1 335 2.88E-93 T 11-11-2016 IPR023210 NADP-dependent oxidoreductase domain SHALO_RS00825 c356a1966d28345e52ecacbc4187e7bf 339 Gene3D G3DSA:3.20.20.100 1 333 1.1E-92 T 11-11-2016 IPR023210 NADP-dependent oxidoreductase domain SHALO_RS00825 c356a1966d28345e52ecacbc4187e7bf 339 Pfam PF00248 Aldo/keto reductase family 15 330 6.5E-70 T 11-11-2016 IPR023210 NADP-dependent oxidoreductase domain SHALO_RS09770 559cd52dbc6e7849f3e3ad700f92d04a 107 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 7 102 2.7E-19 T 11-11-2016 IPR008407 Branched-chain amino acid transport, AzlD SHALO_RS09770 559cd52dbc6e7849f3e3ad700f92d04a 107 PIRSF PIRSF003203 1 107 1.1E-33 T 11-11-2016 IPR008407 Branched-chain amino acid transport, AzlD SHALO_RS01035 8fba95797cfda263d5a20bb584e3058f 322 SUPERFAMILY SSF102114 2 270 4.45E-69 T 11-11-2016 SHALO_RS01035 8fba95797cfda263d5a20bb584e3058f 322 SMART SM00729 11 212 1.8E-12 T 11-11-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 SHALO_RS01035 8fba95797cfda263d5a20bb584e3058f 322 Gene3D G3DSA:3.20.20.70 2 300 3.0E-71 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_RS01035 8fba95797cfda263d5a20bb584e3058f 322 Hamap MF_01225_B Cyclic pyranopterin monophosphate synthase [moaA]. 2 322 37.069 T 11-11-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|Reactome: R-HSA-947581 SHALO_RS01035 8fba95797cfda263d5a20bb584e3058f 322 Pfam PF04055 Radical SAM superfamily 15 175 4.0E-27 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SHALO_RS01035 8fba95797cfda263d5a20bb584e3058f 322 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 17 28 - T 11-11-2016 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|Reactome: R-HSA-947581 SHALO_RS01035 8fba95797cfda263d5a20bb584e3058f 322 Pfam PF13353 4Fe-4S single cluster domain 18 121 1.7E-8 T 11-11-2016 SHALO_RS01035 8fba95797cfda263d5a20bb584e3058f 322 Pfam PF06463 Molybdenum Cofactor Synthesis C 182 303 3.6E-28 T 11-11-2016 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|Reactome: R-HSA-947581 SHALO_RS01035 8fba95797cfda263d5a20bb584e3058f 322 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 2 322 5.1E-109 T 11-11-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|Reactome: R-HSA-947581 SHALO_RS09040 2d4e9ea23134383d8b8b1aafeb0cdc07 652 Pfam PF12848 ABC transporter 227 298 4.4E-7 T 11-11-2016 IPR032781 ABC-transporter extension domain SHALO_RS09040 2d4e9ea23134383d8b8b1aafeb0cdc07 652 Pfam PF16326 ABC transporter C-terminal domain 577 644 5.4E-12 T 11-11-2016 IPR032524 ABC transporter Uup, C-terminal GO:0003677 SHALO_RS09040 2d4e9ea23134383d8b8b1aafeb0cdc07 652 ProSitePatterns PS00211 ABC transporters family signature. 453 467 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHALO_RS09040 2d4e9ea23134383d8b8b1aafeb0cdc07 652 ProSitePatterns PS00211 ABC transporters family signature. 160 174 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHALO_RS09040 2d4e9ea23134383d8b8b1aafeb0cdc07 652 SMART SM00382 356 525 1.6E-10 T 11-11-2016 IPR003593 AAA+ ATPase domain SHALO_RS09040 2d4e9ea23134383d8b8b1aafeb0cdc07 652 SMART SM00382 28 235 4.2E-10 T 11-11-2016 IPR003593 AAA+ ATPase domain SHALO_RS09040 2d4e9ea23134383d8b8b1aafeb0cdc07 652 SUPERFAMILY SSF52540 334 530 1.19E-42 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS09040 2d4e9ea23134383d8b8b1aafeb0cdc07 652 Gene3D G3DSA:3.40.50.300 330 565 1.9E-40 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS09040 2d4e9ea23134383d8b8b1aafeb0cdc07 652 SUPERFAMILY SSF52540 9 237 1.24E-47 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS09040 2d4e9ea23134383d8b8b1aafeb0cdc07 652 Gene3D G3DSA:3.40.50.300 8 104 4.1E-51 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS09040 2d4e9ea23134383d8b8b1aafeb0cdc07 652 Gene3D G3DSA:3.40.50.300 137 283 4.1E-51 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS09040 2d4e9ea23134383d8b8b1aafeb0cdc07 652 Pfam PF00005 ABC transporter 348 481 1.0E-17 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_RS09040 2d4e9ea23134383d8b8b1aafeb0cdc07 652 Pfam PF00005 ABC transporter 19 188 1.4E-27 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_RS09325 dc757421141f83e0ff44b25aaff78ac3 906 SUPERFAMILY SSF56003 299 905 1.44E-142 T 11-11-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 SHALO_RS09325 dc757421141f83e0ff44b25aaff78ac3 906 Gene3D G3DSA:1.10.150.120 77 180 1.1E-34 T 11-11-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 SHALO_RS09325 dc757421141f83e0ff44b25aaff78ac3 906 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 324 845 7.0E-134 T 11-11-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 SHALO_RS09325 dc757421141f83e0ff44b25aaff78ac3 906 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 203 307 1.1E-20 T 11-11-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead SHALO_RS09325 dc757421141f83e0ff44b25aaff78ac3 906 Gene3D G3DSA:3.30.365.10 629 742 4.0E-20 T 11-11-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 SHALO_RS09325 dc757421141f83e0ff44b25aaff78ac3 906 Gene3D G3DSA:3.30.365.10 364 455 9.7E-19 T 11-11-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 SHALO_RS09325 dc757421141f83e0ff44b25aaff78ac3 906 Gene3D G3DSA:3.30.365.10 296 362 4.7E-31 T 11-11-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 SHALO_RS09325 dc757421141f83e0ff44b25aaff78ac3 906 Gene3D G3DSA:3.30.365.10 458 531 4.7E-31 T 11-11-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 SHALO_RS09325 dc757421141f83e0ff44b25aaff78ac3 906 SUPERFAMILY SSF54292 5 90 8.26E-20 T 11-11-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 SHALO_RS09325 dc757421141f83e0ff44b25aaff78ac3 906 Gene3D G3DSA:3.10.20.30 5 76 3.8E-22 T 11-11-2016 IPR012675 Beta-grasp domain SHALO_RS09325 dc757421141f83e0ff44b25aaff78ac3 906 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 40 48 - T 11-11-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 SHALO_RS09325 dc757421141f83e0ff44b25aaff78ac3 906 SUPERFAMILY SSF54665 166 329 2.88E-38 T 11-11-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead SHALO_RS09325 dc757421141f83e0ff44b25aaff78ac3 906 Gene3D G3DSA:3.30.365.10 746 905 2.4E-54 T 11-11-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 SHALO_RS09325 dc757421141f83e0ff44b25aaff78ac3 906 Gene3D G3DSA:3.30.365.10 532 566 2.4E-54 T 11-11-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 SHALO_RS09325 dc757421141f83e0ff44b25aaff78ac3 906 Gene3D G3DSA:3.90.1170.50 181 295 1.1E-32 T 11-11-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead SHALO_RS09325 dc757421141f83e0ff44b25aaff78ac3 906 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 7 60 1.5E-6 T 11-11-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 SHALO_RS09325 dc757421141f83e0ff44b25aaff78ac3 906 SMART SM01008 190 307 1.7E-32 T 11-11-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead SHALO_RS09325 dc757421141f83e0ff44b25aaff78ac3 906 Pfam PF01799 [2Fe-2S] binding domain 75 149 2.2E-26 T 11-11-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 SHALO_RS09325 dc757421141f83e0ff44b25aaff78ac3 906 SUPERFAMILY SSF47741 86 190 1.05E-34 T 11-11-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 SHALO_RS08735 72882b79d54b33ffb8dd122230c66e6c 295 Gene3D G3DSA:1.10.287.110 2 101 8.8E-34 T 11-11-2016 IPR001623 DnaJ domain SHALO_RS08735 72882b79d54b33ffb8dd122230c66e6c 295 ProSitePatterns PS00636 Nt-dnaJ domain signature. 45 64 - T 11-11-2016 IPR018253 DnaJ domain, conserved site SHALO_RS08735 72882b79d54b33ffb8dd122230c66e6c 295 Pfam PF00226 DnaJ domain 5 65 2.7E-26 T 11-11-2016 IPR001623 DnaJ domain SHALO_RS08735 72882b79d54b33ffb8dd122230c66e6c 295 SUPERFAMILY SSF49493 132 204 9.29E-10 T 11-11-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 SHALO_RS08735 72882b79d54b33ffb8dd122230c66e6c 295 SUPERFAMILY SSF46565 3 111 1.83E-32 T 11-11-2016 IPR001623 DnaJ domain SHALO_RS08735 72882b79d54b33ffb8dd122230c66e6c 295 PRINTS PR00625 DnaJ domain signature 60 79 3.5E-27 T 11-11-2016 IPR001623 DnaJ domain SHALO_RS08735 72882b79d54b33ffb8dd122230c66e6c 295 PRINTS PR00625 DnaJ domain signature 6 24 3.5E-27 T 11-11-2016 IPR001623 DnaJ domain SHALO_RS08735 72882b79d54b33ffb8dd122230c66e6c 295 PRINTS PR00625 DnaJ domain signature 40 60 3.5E-27 T 11-11-2016 IPR001623 DnaJ domain SHALO_RS08735 72882b79d54b33ffb8dd122230c66e6c 295 PRINTS PR00625 DnaJ domain signature 24 39 3.5E-27 T 11-11-2016 IPR001623 DnaJ domain SHALO_RS08735 72882b79d54b33ffb8dd122230c66e6c 295 SUPERFAMILY SSF49493 202 280 5.36E-15 T 11-11-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 SHALO_RS08735 72882b79d54b33ffb8dd122230c66e6c 295 Pfam PF01556 DnaJ C terminal domain 136 276 1.1E-31 T 11-11-2016 IPR002939 Chaperone DnaJ, C-terminal SHALO_RS08735 72882b79d54b33ffb8dd122230c66e6c 295 Gene3D G3DSA:2.60.260.20 133 196 1.2E-8 T 11-11-2016 SHALO_RS08735 72882b79d54b33ffb8dd122230c66e6c 295 Gene3D G3DSA:2.60.260.20 200 276 1.4E-14 T 11-11-2016 SHALO_RS08735 72882b79d54b33ffb8dd122230c66e6c 295 SMART SM00271 3 60 2.1E-28 T 11-11-2016 IPR001623 DnaJ domain SHALO_RS11825 14c98a318126e12b299217a247b6ca1a 466 Gene3D G3DSA:1.10.287.130 243 308 1.9E-10 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS11825 14c98a318126e12b299217a247b6ca1a 466 PRINTS PR00344 Bacterial sensor protein C-terminal signature 423 441 5.5E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS11825 14c98a318126e12b299217a247b6ca1a 466 PRINTS PR00344 Bacterial sensor protein C-terminal signature 447 460 5.5E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS11825 14c98a318126e12b299217a247b6ca1a 466 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 404 5.5E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS11825 14c98a318126e12b299217a247b6ca1a 466 Gene3D G3DSA:3.30.450.20 56 149 5.0E-5 T 11-11-2016 SHALO_RS11825 14c98a318126e12b299217a247b6ca1a 466 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 363 461 9.6E-17 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS11825 14c98a318126e12b299217a247b6ca1a 466 Gene3D G3DSA:3.30.565.10 319 461 5.8E-30 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS11825 14c98a318126e12b299217a247b6ca1a 466 SUPERFAMILY SSF55874 317 461 2.49E-30 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS11825 14c98a318126e12b299217a247b6ca1a 466 SUPERFAMILY SSF47384 238 317 8.24E-14 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS11825 14c98a318126e12b299217a247b6ca1a 466 SMART SM00388 249 316 1.5E-13 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS11825 14c98a318126e12b299217a247b6ca1a 466 Pfam PF00512 His Kinase A (phospho-acceptor) domain 250 314 1.7E-10 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS11825 14c98a318126e12b299217a247b6ca1a 466 SMART SM00387 359 463 3.0E-22 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS14910 1ef0551b960fb15fe167e078661b030f 89 ProDom PD061650 JHP0447 HP0495 CJ0253 14 89 2.0E-14 T 11-11-2016 SHALO_RS14910 1ef0551b960fb15fe167e078661b030f 89 Pfam PF04359 Protein of unknown function (DUF493) 12 89 2.6E-15 T 11-11-2016 IPR007454 Uncharacterised protein family UPF0250 SHALO_RS14910 1ef0551b960fb15fe167e078661b030f 89 Gene3D G3DSA:3.30.70.1460 11 89 2.2E-12 T 11-11-2016 IPR027471 YbeD-like domain SHALO_RS14910 1ef0551b960fb15fe167e078661b030f 89 SUPERFAMILY SSF117991 7 89 3.66E-21 T 11-11-2016 IPR027471 YbeD-like domain SHALO_RS00905 452911cbbc6fbae7f2f5cd8216973f55 280 Hamap MF_00152 Probable endonuclease 4 [nfo]. 2 279 41.533 T 11-11-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 SHALO_RS00905 452911cbbc6fbae7f2f5cd8216973f55 280 SMART SM00518 3 279 1.3E-117 T 11-11-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 SHALO_RS00905 452911cbbc6fbae7f2f5cd8216973f55 280 Gene3D G3DSA:3.20.20.150 1 280 1.2E-115 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain SHALO_RS00905 452911cbbc6fbae7f2f5cd8216973f55 280 ProSitePatterns PS00729 AP endonucleases family 2 signature 1. 69 77 - T 11-11-2016 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 SHALO_RS00905 452911cbbc6fbae7f2f5cd8216973f55 280 Pfam PF01261 Xylose isomerase-like TIM barrel 21 238 9.8E-37 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain SHALO_RS00905 452911cbbc6fbae7f2f5cd8216973f55 280 TIGRFAM TIGR00587 nfo: apurinic endonuclease (APN1) 3 276 6.3E-104 T 11-11-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 SHALO_RS00905 452911cbbc6fbae7f2f5cd8216973f55 280 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 175 182 - T 11-11-2016 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 SHALO_RS00905 452911cbbc6fbae7f2f5cd8216973f55 280 ProSitePatterns PS00731 AP endonucleases family 2 signature 3. 215 231 - T 11-11-2016 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 SHALO_RS00905 452911cbbc6fbae7f2f5cd8216973f55 280 SUPERFAMILY SSF51658 1 279 2.49E-95 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain SHALO_RS09140 88bc147709680554317415d6e983bbbe 253 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 5 222 1.1E-67 T 11-11-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 SHALO_RS09140 88bc147709680554317415d6e983bbbe 253 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 99 125 2.6E-40 T 11-11-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 SHALO_RS09140 88bc147709680554317415d6e983bbbe 253 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 81 99 2.6E-40 T 11-11-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 SHALO_RS09140 88bc147709680554317415d6e983bbbe 253 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 150 178 2.6E-40 T 11-11-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 SHALO_RS09140 88bc147709680554317415d6e983bbbe 253 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 4 31 2.6E-40 T 11-11-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 SHALO_RS09140 88bc147709680554317415d6e983bbbe 253 Pfam PF00902 Sec-independent protein translocase protein (TatC) 8 217 3.5E-68 T 11-11-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 SHALO_RS09140 88bc147709680554317415d6e983bbbe 253 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 2 245 18.698 T 11-11-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 SHALO_RS03340 03c44a14de16c2270c5f19ad16607ff2 446 Pfam PF06039 Malate:quinone oxidoreductase (Mqo) 5 413 6.9E-27 T 11-11-2016 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 SHALO_RS03340 03c44a14de16c2270c5f19ad16607ff2 446 Gene3D G3DSA:3.50.50.60 4 53 3.5E-21 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHALO_RS03340 03c44a14de16c2270c5f19ad16607ff2 446 Gene3D G3DSA:3.50.50.60 112 292 3.5E-21 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHALO_RS03340 03c44a14de16c2270c5f19ad16607ff2 446 SUPERFAMILY SSF51905 1 295 3.56E-24 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHALO_RS09135 973de3049735043a81c46a047389ca01 141 Pfam PF02416 mttA/Hcf106 family 4 49 9.9E-6 T 11-11-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 SHALO_RS09135 973de3049735043a81c46a047389ca01 141 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 69 2.7E-20 T 11-11-2016 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 SHALO_RS09135 973de3049735043a81c46a047389ca01 141 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 141 14.736 T 11-11-2016 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 SHALO_RS09135 973de3049735043a81c46a047389ca01 141 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 4.9E-14 T 11-11-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 SHALO_RS09135 973de3049735043a81c46a047389ca01 141 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 4.9E-14 T 11-11-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 SHALO_RS09135 973de3049735043a81c46a047389ca01 141 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 4.9E-14 T 11-11-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 SHALO_RS11895 21150050f55f65b31efea41950d2d33c 629 SMART SM00283 362 627 6.6E-30 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SHALO_RS11895 21150050f55f65b31efea41950d2d33c 629 SMART SM00304 297 351 4.8E-9 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SHALO_RS11895 21150050f55f65b31efea41950d2d33c 629 Gene3D G3DSA:1.10.287.950 385 620 7.7E-42 T 11-11-2016 SHALO_RS11895 21150050f55f65b31efea41950d2d33c 629 SUPERFAMILY SSF58104 319 628 7.46E-58 T 11-11-2016 SHALO_RS11895 21150050f55f65b31efea41950d2d33c 629 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 438 626 2.1E-38 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SHALO_RS11895 21150050f55f65b31efea41950d2d33c 629 Gene3D G3DSA:3.30.450.20 145 273 5.2E-15 T 11-11-2016 SHALO_RS11895 21150050f55f65b31efea41950d2d33c 629 Pfam PF02743 Cache domain 33 259 7.6E-18 T 11-11-2016 IPR033479 Double Cache domain 1 SHALO_RS11895 21150050f55f65b31efea41950d2d33c 629 Pfam PF00672 HAMP domain 277 347 9.2E-11 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SHALO_RS10365 c1c67a2bf7995b39e85f523858c7aa5c 311 Gene3D G3DSA:3.40.50.1400 193 310 3.1E-29 T 11-11-2016 SHALO_RS10365 c1c67a2bf7995b39e85f523858c7aa5c 311 ProSitePatterns PS00534 Ferrochelatase signature. 183 201 - T 11-11-2016 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 SHALO_RS10365 c1c67a2bf7995b39e85f523858c7aa5c 311 TIGRFAM TIGR00109 hemH: ferrochelatase 2 310 5.0E-89 T 11-11-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 SHALO_RS10365 c1c67a2bf7995b39e85f523858c7aa5c 311 Hamap MF_00323 Ferrochelatase [hemH]. 1 311 30.542 T 11-11-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 SHALO_RS10365 c1c67a2bf7995b39e85f523858c7aa5c 311 Gene3D G3DSA:3.40.50.1400 2 192 3.9E-57 T 11-11-2016 SHALO_RS10365 c1c67a2bf7995b39e85f523858c7aa5c 311 SUPERFAMILY SSF53800 2 310 1.83E-82 T 11-11-2016 SHALO_RS10365 c1c67a2bf7995b39e85f523858c7aa5c 311 Pfam PF00762 Ferrochelatase 2 310 1.9E-94 T 11-11-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 SHALO_RS08455 36d11dc9b980a58d01d5d47e85969db7 298 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 64 78 - T 11-11-2016 IPR000092 Polyprenyl synthetase GO:0008299 SHALO_RS08455 36d11dc9b980a58d01d5d47e85969db7 298 Pfam PF00348 Polyprenyl synthetase 28 247 1.3E-57 T 11-11-2016 IPR000092 Polyprenyl synthetase GO:0008299 SHALO_RS08455 36d11dc9b980a58d01d5d47e85969db7 298 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 182 194 - T 11-11-2016 IPR000092 Polyprenyl synthetase GO:0008299 SHALO_RS08455 36d11dc9b980a58d01d5d47e85969db7 298 Gene3D G3DSA:1.10.600.10 7 297 1.4E-84 T 11-11-2016 IPR008949 Isoprenoid synthase domain SHALO_RS08455 36d11dc9b980a58d01d5d47e85969db7 298 SUPERFAMILY SSF48576 25 283 2.88E-68 T 11-11-2016 IPR008949 Isoprenoid synthase domain SHALO_RS14030 cff275c7ef6faec31f28f6713fa72d59 212 Pfam PF13247 4Fe-4S dicluster domain 51 145 1.3E-22 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_RS14030 cff275c7ef6faec31f28f6713fa72d59 212 Gene3D G3DSA:3.30.70.20 3 61 8.1E-15 T 11-11-2016 SHALO_RS14030 cff275c7ef6faec31f28f6713fa72d59 212 SUPERFAMILY SSF54862 2 183 2.83E-60 T 11-11-2016 SHALO_RS14030 cff275c7ef6faec31f28f6713fa72d59 212 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 90 101 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_RS14030 cff275c7ef6faec31f28f6713fa72d59 212 Gene3D G3DSA:3.30.70.20 62 109 1.0E-24 T 11-11-2016 SHALO_RS14030 cff275c7ef6faec31f28f6713fa72d59 212 Pfam PF12800 4Fe-4S binding domain 10 24 6.1E-4 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_RS14030 cff275c7ef6faec31f28f6713fa72d59 212 Gene3D G3DSA:3.30.70.20 110 183 3.9E-19 T 11-11-2016 SHALO_RS09075 fc5d74116175bf56cb708bdab2a5ad75 510 Pfam PF01808 AICARFT/IMPCHase bienzyme 131 441 2.2E-95 T 11-11-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 SHALO_RS09075 fc5d74116175bf56cb708bdab2a5ad75 510 SMART SM00851 12 126 3.0E-52 T 11-11-2016 IPR011607 Methylglyoxal synthase-like domain SHALO_RS09075 fc5d74116175bf56cb708bdab2a5ad75 510 Gene3D G3DSA:3.40.50.1380 2 182 1.8E-76 T 11-11-2016 IPR011607 Methylglyoxal synthase-like domain SHALO_RS09075 fc5d74116175bf56cb708bdab2a5ad75 510 Gene3D G3DSA:3.40.140.20 233 346 1.5E-35 T 11-11-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 SHALO_RS09075 fc5d74116175bf56cb708bdab2a5ad75 510 PIRSF PIRSF000414 1 510 2.4E-191 T 11-11-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 SHALO_RS09075 fc5d74116175bf56cb708bdab2a5ad75 510 SMART SM00798 131 442 1.8E-144 T 11-11-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 SHALO_RS09075 fc5d74116175bf56cb708bdab2a5ad75 510 Pfam PF02142 MGS-like domain 12 125 2.2E-25 T 11-11-2016 IPR011607 Methylglyoxal synthase-like domain SHALO_RS09075 fc5d74116175bf56cb708bdab2a5ad75 510 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 1 510 38.965 T 11-11-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 SHALO_RS09075 fc5d74116175bf56cb708bdab2a5ad75 510 Gene3D G3DSA:3.40.140.20 357 500 2.0E-48 T 11-11-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 SHALO_RS09075 fc5d74116175bf56cb708bdab2a5ad75 510 SUPERFAMILY SSF52335 2 190 6.15E-66 T 11-11-2016 IPR011607 Methylglyoxal synthase-like domain SHALO_RS09075 fc5d74116175bf56cb708bdab2a5ad75 510 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 2 510 4.7E-169 T 11-11-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 SHALO_RS09075 fc5d74116175bf56cb708bdab2a5ad75 510 SUPERFAMILY SSF53927 203 510 6.42E-107 T 11-11-2016 IPR016193 Cytidine deaminase-like GO:0003824 SHALO_RS03610 27de2ebaf4eb6a073e519cdc081b89fb 622 Pfam PF13667 ThiC-associated domain 19 96 6.0E-34 T 11-11-2016 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 SHALO_RS03610 27de2ebaf4eb6a073e519cdc081b89fb 622 Pfam PF01964 Radical SAM ThiC family 136 584 2.2E-198 T 11-11-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 SHALO_RS03610 27de2ebaf4eb6a073e519cdc081b89fb 622 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 135 590 55.767 T 11-11-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 SHALO_RS03610 27de2ebaf4eb6a073e519cdc081b89fb 622 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 135 588 8.8E-216 T 11-11-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 SHALO_RS03755 e8d4167afe99330b2bc48e368352442b 508 Gene3D G3DSA:2.40.50.140 6 145 2.1E-38 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold SHALO_RS03755 e8d4167afe99330b2bc48e368352442b 508 Pfam PF01336 OB-fold nucleic acid binding domain 60 136 4.0E-14 T 11-11-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 SHALO_RS03755 e8d4167afe99330b2bc48e368352442b 508 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 5 493 2.5E-199 T 11-11-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 SHALO_RS03755 e8d4167afe99330b2bc48e368352442b 508 PRINTS PR00982 Lysyl-tRNA synthetase signature 253 270 3.4E-38 T 11-11-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 SHALO_RS03755 e8d4167afe99330b2bc48e368352442b 508 PRINTS PR00982 Lysyl-tRNA synthetase signature 376 392 3.4E-38 T 11-11-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 SHALO_RS03755 e8d4167afe99330b2bc48e368352442b 508 PRINTS PR00982 Lysyl-tRNA synthetase signature 235 248 3.4E-38 T 11-11-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 SHALO_RS03755 e8d4167afe99330b2bc48e368352442b 508 PRINTS PR00982 Lysyl-tRNA synthetase signature 190 200 3.4E-38 T 11-11-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 SHALO_RS03755 e8d4167afe99330b2bc48e368352442b 508 PRINTS PR00982 Lysyl-tRNA synthetase signature 206 222 3.4E-38 T 11-11-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 SHALO_RS03755 e8d4167afe99330b2bc48e368352442b 508 SUPERFAMILY SSF50249 5 146 2.45E-33 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold SHALO_RS03755 e8d4167afe99330b2bc48e368352442b 508 Gene3D G3DSA:3.30.930.10 148 490 1.5E-116 T 11-11-2016 SHALO_RS03755 e8d4167afe99330b2bc48e368352442b 508 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 10 496 42.318 T 11-11-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 SHALO_RS03755 e8d4167afe99330b2bc48e368352442b 508 Pfam PF00152 tRNA synthetases class II (D, K and N) 153 491 5.6E-80 T 11-11-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 SHALO_RS03755 e8d4167afe99330b2bc48e368352442b 508 SUPERFAMILY SSF55681 153 492 6.17E-116 T 11-11-2016 SHALO_RS03465 61ae883f754ebadce1499a7bd4940108 421 Pfam PF04052 TolB amino-terminal domain 20 116 3.9E-5 T 11-11-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 SHALO_RS03465 61ae883f754ebadce1499a7bd4940108 421 Pfam PF07676 WD40-like Beta Propeller Repeat 273 306 0.0047 T 11-11-2016 IPR011659 WD40-like Beta Propeller SHALO_RS03465 61ae883f754ebadce1499a7bd4940108 421 Gene3D G3DSA:2.130.10.10 145 408 1.3E-35 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 SHALO_RS03465 61ae883f754ebadce1499a7bd4940108 421 SUPERFAMILY SSF69304 174 421 5.89E-31 T 11-11-2016 SHALO_RS13335 f93163eb7a836550497386916a8a1d3f 247 Pfam PF02613 Nitrate reductase delta subunit 46 169 3.6E-14 T 11-11-2016 IPR020945 DMSO/Nitrate reductase chaperone SHALO_RS13335 f93163eb7a836550497386916a8a1d3f 247 SUPERFAMILY SSF89155 7 206 4.32E-30 T 11-11-2016 IPR020945 DMSO/Nitrate reductase chaperone SHALO_RS13335 f93163eb7a836550497386916a8a1d3f 247 Gene3D G3DSA:1.10.3480.10 4 202 4.5E-21 T 11-11-2016 IPR020945 DMSO/Nitrate reductase chaperone SHALO_RS02490 229e20115b3acec0c99270f7fbe7e09b 279 Pfam PF00248 Aldo/keto reductase family 17 277 1.9E-30 T 11-11-2016 IPR023210 NADP-dependent oxidoreductase domain SHALO_RS02490 229e20115b3acec0c99270f7fbe7e09b 279 SUPERFAMILY SSF51430 3 277 1.44E-53 T 11-11-2016 IPR023210 NADP-dependent oxidoreductase domain SHALO_RS02490 229e20115b3acec0c99270f7fbe7e09b 279 Gene3D G3DSA:3.20.20.100 4 277 5.8E-61 T 11-11-2016 IPR023210 NADP-dependent oxidoreductase domain SHALO_RS02490 229e20115b3acec0c99270f7fbe7e09b 279 PRINTS PR00069 Aldo-keto reductase signature 139 156 3.1E-10 T 11-11-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 SHALO_RS02490 229e20115b3acec0c99270f7fbe7e09b 279 PRINTS PR00069 Aldo-keto reductase signature 213 237 3.1E-10 T 11-11-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 SHALO_RS02490 229e20115b3acec0c99270f7fbe7e09b 279 PRINTS PR00069 Aldo-keto reductase signature 33 57 3.1E-10 T 11-11-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 SHALO_RS11060 3f370a10d7d069811f8aad05524533b5 275 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 49 274 2.5E-57 T 11-11-2016 SHALO_RS11060 3f370a10d7d069811f8aad05524533b5 275 SUPERFAMILY SSF53335 54 255 6.08E-30 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS11060 3f370a10d7d069811f8aad05524533b5 275 PIRSF PIRSF000401 5 275 2.0E-63 T 11-11-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 SHALO_RS11060 3f370a10d7d069811f8aad05524533b5 275 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 56 267 7.7E-57 T 11-11-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 SHALO_RS11060 3f370a10d7d069811f8aad05524533b5 275 Gene3D G3DSA:3.40.50.150 103 269 4.5E-31 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS11060 3f370a10d7d069811f8aad05524533b5 275 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 5 274 27.947 T 11-11-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 SHALO_RS15135 f3db145a2908e38c2f103ebb174b72b2 599 Gene3D G3DSA:3.40.50.300 2 204 3.2E-64 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS15135 f3db145a2908e38c2f103ebb174b72b2 599 SUPERFAMILY SSF54980 396 509 1.44E-26 T 11-11-2016 IPR009022 Elongation factor G, III-V domain SHALO_RS15135 f3db145a2908e38c2f103ebb174b72b2 599 Pfam PF03144 Elongation factor Tu domain 2 218 287 1.6E-11 T 11-11-2016 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 SHALO_RS15135 f3db145a2908e38c2f103ebb174b72b2 599 Gene3D G3DSA:3.30.70.870 303 397 2.1E-28 T 11-11-2016 SHALO_RS15135 f3db145a2908e38c2f103ebb174b72b2 599 Pfam PF00009 Elongation factor Tu GTP binding domain 3 194 1.4E-54 T 11-11-2016 SHALO_RS15135 f3db145a2908e38c2f103ebb174b72b2 599 Gene3D G3DSA:2.40.30.10 205 302 8.8E-28 T 11-11-2016 SHALO_RS15135 f3db145a2908e38c2f103ebb174b72b2 599 Gene3D G3DSA:3.30.70.240 398 479 8.0E-31 T 11-11-2016 IPR000640 Translation elongation factor EFG, V domain SHALO_RS15135 f3db145a2908e38c2f103ebb174b72b2 599 SMART SM00838 393 481 0.0042 T 11-11-2016 IPR000640 Translation elongation factor EFG, V domain SHALO_RS15135 f3db145a2908e38c2f103ebb174b72b2 599 SUPERFAMILY SSF50447 179 300 3.09E-31 T 11-11-2016 IPR009000 Translation protein, beta-barrel domain SHALO_RS15135 f3db145a2908e38c2f103ebb174b72b2 599 SUPERFAMILY SSF52540 3 218 1.33E-54 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS15135 f3db145a2908e38c2f103ebb174b72b2 599 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 43 58 - T 11-11-2016 IPR031157 Tr-type G domain, conserved site SHALO_RS15135 f3db145a2908e38c2f103ebb174b72b2 599 Gene3D G3DSA:2.40.50.250 480 574 1.9E-37 T 11-11-2016 SHALO_RS15135 f3db145a2908e38c2f103ebb174b72b2 599 PRINTS PR00315 GTP-binding elongation factor signature 122 131 1.4E-14 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SHALO_RS15135 f3db145a2908e38c2f103ebb174b72b2 599 PRINTS PR00315 GTP-binding elongation factor signature 86 97 1.4E-14 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SHALO_RS15135 f3db145a2908e38c2f103ebb174b72b2 599 PRINTS PR00315 GTP-binding elongation factor signature 6 19 1.4E-14 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SHALO_RS15135 f3db145a2908e38c2f103ebb174b72b2 599 PRINTS PR00315 GTP-binding elongation factor signature 50 58 1.4E-14 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SHALO_RS15135 f3db145a2908e38c2f103ebb174b72b2 599 PRINTS PR00315 GTP-binding elongation factor signature 70 80 1.4E-14 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SHALO_RS15135 f3db145a2908e38c2f103ebb174b72b2 599 Pfam PF00679 Elongation factor G C-terminus 394 479 4.8E-22 T 11-11-2016 IPR000640 Translation elongation factor EFG, V domain SHALO_RS15135 f3db145a2908e38c2f103ebb174b72b2 599 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 4 596 5.3E-285 T 11-11-2016 IPR006298 GTP-binding protein TypA GO:0005525 SHALO_RS15135 f3db145a2908e38c2f103ebb174b72b2 599 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 146 3.2E-25 T 11-11-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SHALO_RS15135 f3db145a2908e38c2f103ebb174b72b2 599 SUPERFAMILY SSF54980 302 385 1.37E-8 T 11-11-2016 IPR009022 Elongation factor G, III-V domain SHALO_RS04895 8742592e75e7b72fec723a443ca745f4 416 Gene3D G3DSA:1.20.810.10 12 409 5.7E-125 T 11-11-2016 IPR027387 Cytochrome b/b6-like domain Reactome: R-HSA-611105 SHALO_RS04895 8742592e75e7b72fec723a443ca745f4 416 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 287 396 3.1E-28 T 11-11-2016 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 SHALO_RS04895 8742592e75e7b72fec723a443ca745f4 416 Pfam PF00033 Cytochrome b/b6/petB 29 215 3.6E-58 T 11-11-2016 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 SHALO_RS04895 8742592e75e7b72fec723a443ca745f4 416 SUPERFAMILY SSF81342 12 289 2.22E-80 T 11-11-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 SHALO_RS04895 8742592e75e7b72fec723a443ca745f4 416 SUPERFAMILY SSF81648 241 389 1.83E-35 T 11-11-2016 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 SHALO_RS08425 99024eeb0fde582f11be5ad19b0e06f5 602 SUPERFAMILY SSF50475 1 317 4.71E-97 T 11-11-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 SHALO_RS08425 99024eeb0fde582f11be5ad19b0e06f5 602 TIGRFAM TIGR03701 mena_SCO4490: menaquinone biosynthesis decarboxylase, SCO4490 family 4 440 9.8E-190 T 11-11-2016 IPR022390 4-hydroxybenzoate decarboxylase subunit C GO:0016831 SHALO_RS08425 99024eeb0fde582f11be5ad19b0e06f5 602 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 468 548 1.9E-4 T 11-11-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 SHALO_RS08425 99024eeb0fde582f11be5ad19b0e06f5 602 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 5 417 1.4E-123 T 11-11-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 SHALO_RS08425 99024eeb0fde582f11be5ad19b0e06f5 602 SUPERFAMILY SSF143968 467 586 5.62E-10 T 11-11-2016 SHALO_RS08425 99024eeb0fde582f11be5ad19b0e06f5 602 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 1 446 5.8E-132 T 11-11-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 SHALO_RS08425 99024eeb0fde582f11be5ad19b0e06f5 602 SUPERFAMILY SSF143968 318 447 2.35E-38 T 11-11-2016 SHALO_RS08425 99024eeb0fde582f11be5ad19b0e06f5 602 Gene3D G3DSA:3.40.1670.10 332 446 2.6E-28 T 11-11-2016 SHALO_RS08425 99024eeb0fde582f11be5ad19b0e06f5 602 Gene3D G3DSA:3.40.1670.10 467 576 1.9E-19 T 11-11-2016 SHALO_RS04110 1d52a5dd09b1b22a157f7d6a92bc5e0c 405 Gene3D G3DSA:3.50.50.60 3 185 1.4E-49 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHALO_RS04110 1d52a5dd09b1b22a157f7d6a92bc5e0c 405 Gene3D G3DSA:3.50.50.60 349 404 1.4E-49 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHALO_RS04110 1d52a5dd09b1b22a157f7d6a92bc5e0c 405 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 4 402 2.4E-133 T 11-11-2016 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like SHALO_RS04110 1d52a5dd09b1b22a157f7d6a92bc5e0c 405 PRINTS PR00419 Adrenodoxin reductase family signature 26 39 2.5E-6 T 11-11-2016 SHALO_RS04110 1d52a5dd09b1b22a157f7d6a92bc5e0c 405 PRINTS PR00419 Adrenodoxin reductase family signature 3 25 2.5E-6 T 11-11-2016 SHALO_RS04110 1d52a5dd09b1b22a157f7d6a92bc5e0c 405 PRINTS PR00419 Adrenodoxin reductase family signature 153 167 2.5E-6 T 11-11-2016 SHALO_RS04110 1d52a5dd09b1b22a157f7d6a92bc5e0c 405 SUPERFAMILY SSF160996 188 350 1.19E-35 T 11-11-2016 SHALO_RS04110 1d52a5dd09b1b22a157f7d6a92bc5e0c 405 Gene3D G3DSA:2.40.30.10 187 278 4.5E-15 T 11-11-2016 SHALO_RS04110 1d52a5dd09b1b22a157f7d6a92bc5e0c 405 SUPERFAMILY SSF51905 347 404 1.25E-50 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHALO_RS04110 1d52a5dd09b1b22a157f7d6a92bc5e0c 405 SUPERFAMILY SSF51905 2 187 1.25E-50 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHALO_RS04110 1d52a5dd09b1b22a157f7d6a92bc5e0c 405 Pfam PF03486 HI0933-like protein 3 402 4.9E-121 T 11-11-2016 SHALO_RS10395 122fba3b42ea11f08b5854298cff126d 345 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 1 333 2.5E-76 T 11-11-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 SHALO_RS10395 122fba3b42ea11f08b5854298cff126d 345 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 171 314 1.3E-35 T 11-11-2016 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 SHALO_RS10395 122fba3b42ea11f08b5854298cff126d 345 SUPERFAMILY SSF53756 2 336 2.86E-83 T 11-11-2016 SHALO_RS10395 122fba3b42ea11f08b5854298cff126d 345 Gene3D G3DSA:3.40.50.2000 2 170 8.2E-41 T 11-11-2016 SHALO_RS10395 122fba3b42ea11f08b5854298cff126d 345 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 2 339 28.046 T 11-11-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 SHALO_RS10395 122fba3b42ea11f08b5854298cff126d 345 Gene3D G3DSA:3.40.50.2000 171 335 8.6E-29 T 11-11-2016 SHALO_RS10395 122fba3b42ea11f08b5854298cff126d 345 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 2 141 9.5E-26 T 11-11-2016 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 SHALO_RS04840 26fdde4386ef4368f18210bcda162643 158 Pfam PF08281 Sigma-70, region 4 97 143 1.8E-14 T 11-11-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SHALO_RS04840 26fdde4386ef4368f18210bcda162643 158 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 3 150 1.9E-18 T 11-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SHALO_RS04840 26fdde4386ef4368f18210bcda162643 158 Gene3D G3DSA:1.10.1740.10 3 64 3.6E-9 T 11-11-2016 SHALO_RS04840 26fdde4386ef4368f18210bcda162643 158 Pfam PF04542 Sigma-70 region 2 3 64 4.4E-6 T 11-11-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SHALO_RS04840 26fdde4386ef4368f18210bcda162643 158 SUPERFAMILY SSF88946 2 83 6.67E-10 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SHALO_RS04840 26fdde4386ef4368f18210bcda162643 158 SUPERFAMILY SSF88659 84 151 2.06E-14 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SHALO_RS04840 26fdde4386ef4368f18210bcda162643 158 Gene3D G3DSA:1.10.10.10 88 152 9.3E-18 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS13175 aa8760a54f0d29e1ce9045bbb96b5450 542 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 354 540 1.9E-40 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SHALO_RS13175 aa8760a54f0d29e1ce9045bbb96b5450 542 SMART SM00304 211 265 3.0E-8 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SHALO_RS13175 aa8760a54f0d29e1ce9045bbb96b5450 542 Gene3D G3DSA:1.10.287.950 298 497 4.0E-46 T 11-11-2016 SHALO_RS13175 aa8760a54f0d29e1ce9045bbb96b5450 542 SUPERFAMILY SSF58104 233 541 1.96E-59 T 11-11-2016 SHALO_RS13175 aa8760a54f0d29e1ce9045bbb96b5450 542 Pfam PF00672 HAMP domain 192 261 2.4E-10 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SHALO_RS13175 aa8760a54f0d29e1ce9045bbb96b5450 542 SMART SM00283 280 541 1.6E-43 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SHALO_RS12625 8a1c489472a4d5931c7489864ad45fe3 235 Gene3D G3DSA:3.40.50.2300 4 128 2.9E-27 T 11-11-2016 SHALO_RS12625 8a1c489472a4d5931c7489864ad45fe3 235 Gene3D G3DSA:1.10.10.10 151 234 5.6E-12 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS12625 8a1c489472a4d5931c7489864ad45fe3 235 Pfam PF00072 Response regulator receiver domain 10 120 1.3E-16 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS12625 8a1c489472a4d5931c7489864ad45fe3 235 SMART SM00448 8 120 3.6E-21 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS12625 8a1c489472a4d5931c7489864ad45fe3 235 SMART SM00862 163 233 5.0E-8 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS12625 8a1c489472a4d5931c7489864ad45fe3 235 SUPERFAMILY SSF52172 7 134 4.13E-29 T 11-11-2016 IPR011006 CheY-like superfamily SHALO_RS12625 8a1c489472a4d5931c7489864ad45fe3 235 SUPERFAMILY SSF46894 149 233 5.39E-13 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SHALO_RS12625 8a1c489472a4d5931c7489864ad45fe3 235 Pfam PF00486 Transcriptional regulatory protein, C terminal 164 233 3.4E-10 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS05535 d336a8980a30fdfcfa811e5c01b344f1 185 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 12 184 32.918 T 11-11-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|Reactome: R-HSA-74217 SHALO_RS05535 d336a8980a30fdfcfa811e5c01b344f1 185 Pfam PF00156 Phosphoribosyl transferase domain 51 161 6.9E-15 T 11-11-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 SHALO_RS05535 d336a8980a30fdfcfa811e5c01b344f1 185 Gene3D G3DSA:3.40.50.2020 9 184 4.6E-62 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like SHALO_RS05535 d336a8980a30fdfcfa811e5c01b344f1 185 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 12 183 8.2E-63 T 11-11-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|Reactome: R-HSA-74217 SHALO_RS05535 d336a8980a30fdfcfa811e5c01b344f1 185 SUPERFAMILY SSF53271 15 168 1.7E-42 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like SHALO_RS14010 550c80b84912d2969c094bd5cbc180cc 281 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 253 264 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_RS14010 550c80b84912d2969c094bd5cbc180cc 281 Gene3D G3DSA:3.30.70.20 184 278 9.6E-10 T 11-11-2016 SHALO_RS14010 550c80b84912d2969c094bd5cbc180cc 281 Pfam PF12801 4Fe-4S binding domain 62 96 5.5E-10 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_RS14010 550c80b84912d2969c094bd5cbc180cc 281 Pfam PF12801 4Fe-4S binding domain 169 209 4.4E-4 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_RS14010 550c80b84912d2969c094bd5cbc180cc 281 Pfam PF12801 4Fe-4S binding domain 45 51 410.0 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_RS14010 550c80b84912d2969c094bd5cbc180cc 281 Pfam PF12801 4Fe-4S binding domain 125 154 4.7 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_RS14010 550c80b84912d2969c094bd5cbc180cc 281 SUPERFAMILY SSF54862 72 93 3.24E-15 T 11-11-2016 SHALO_RS14010 550c80b84912d2969c094bd5cbc180cc 281 SUPERFAMILY SSF54862 138 270 3.24E-15 T 11-11-2016 SHALO_RS14010 550c80b84912d2969c094bd5cbc180cc 281 Pfam PF00037 4Fe-4S binding domain 251 269 1.2E-4 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_RS01720 33822e288e9eb8e9e461c357c0406501 260 Gene3D G3DSA:1.10.3720.10 63 243 7.0E-15 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHALO_RS01720 33822e288e9eb8e9e461c357c0406501 260 SUPERFAMILY SSF161098 67 245 1.28E-19 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHALO_RS01720 33822e288e9eb8e9e461c357c0406501 260 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 86 242 1.6E-10 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHALO_RS08240 4c0996f2268d7477bbdadc1a77aba734 216 SUPERFAMILY SSF52172 1 117 1.71E-28 T 11-11-2016 IPR011006 CheY-like superfamily SHALO_RS08240 4c0996f2268d7477bbdadc1a77aba734 216 SMART SM00448 1 111 1.3E-29 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS08240 4c0996f2268d7477bbdadc1a77aba734 216 Pfam PF00486 Transcriptional regulatory protein, C terminal 142 212 6.3E-13 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS08240 4c0996f2268d7477bbdadc1a77aba734 216 Gene3D G3DSA:1.10.10.10 139 213 3.7E-14 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS08240 4c0996f2268d7477bbdadc1a77aba734 216 SUPERFAMILY SSF46894 137 212 3.97E-14 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SHALO_RS08240 4c0996f2268d7477bbdadc1a77aba734 216 Pfam PF00072 Response regulator receiver domain 4 111 1.2E-24 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS08240 4c0996f2268d7477bbdadc1a77aba734 216 SMART SM00862 142 212 1.2E-11 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS08240 4c0996f2268d7477bbdadc1a77aba734 216 Gene3D G3DSA:3.40.50.2300 1 116 2.6E-31 T 11-11-2016 SHALO_RS10305 e0cfff0bbd21a6c25f21fd7d3145254b 848 SUPERFAMILY SSF55186 542 700 3.79E-48 T 11-11-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 SHALO_RS10305 e0cfff0bbd21a6c25f21fd7d3145254b 848 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 846 165.583 T 11-11-2016 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 SHALO_RS10305 e0cfff0bbd21a6c25f21fd7d3145254b 848 SMART SM00863 638 681 3.5E-20 T 11-11-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 SHALO_RS10305 e0cfff0bbd21a6c25f21fd7d3145254b 848 Gene3D G3DSA:3.30.930.10 2 234 5.0E-109 T 11-11-2016 SHALO_RS10305 e0cfff0bbd21a6c25f21fd7d3145254b 848 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 638 681 4.8E-18 T 11-11-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 SHALO_RS10305 e0cfff0bbd21a6c25f21fd7d3145254b 848 SUPERFAMILY SSF55681 2 239 1.74E-100 T 11-11-2016 SHALO_RS10305 e0cfff0bbd21a6c25f21fd7d3145254b 848 Pfam PF02272 DHHA1 domain 775 838 1.1E-13 T 11-11-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 SHALO_RS10305 e0cfff0bbd21a6c25f21fd7d3145254b 848 SUPERFAMILY SSF50447 447 538 1.55E-12 T 11-11-2016 IPR009000 Translation protein, beta-barrel domain SHALO_RS10305 e0cfff0bbd21a6c25f21fd7d3145254b 848 PRINTS PR00980 Alanyl-tRNA synthetase signature 220 233 6.6E-31 T 11-11-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 SHALO_RS10305 e0cfff0bbd21a6c25f21fd7d3145254b 848 PRINTS PR00980 Alanyl-tRNA synthetase signature 268 284 6.6E-31 T 11-11-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 SHALO_RS10305 e0cfff0bbd21a6c25f21fd7d3145254b 848 PRINTS PR00980 Alanyl-tRNA synthetase signature 292 305 6.6E-31 T 11-11-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 SHALO_RS10305 e0cfff0bbd21a6c25f21fd7d3145254b 848 PRINTS PR00980 Alanyl-tRNA synthetase signature 193 204 6.6E-31 T 11-11-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 SHALO_RS10305 e0cfff0bbd21a6c25f21fd7d3145254b 848 PRINTS PR00980 Alanyl-tRNA synthetase signature 71 82 6.6E-31 T 11-11-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 SHALO_RS10305 e0cfff0bbd21a6c25f21fd7d3145254b 848 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 2 825 3.0E-285 T 11-11-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 SHALO_RS10305 e0cfff0bbd21a6c25f21fd7d3145254b 848 Pfam PF01411 tRNA synthetases class II (A) 2 540 3.9E-202 T 11-11-2016 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 SHALO_RS10305 e0cfff0bbd21a6c25f21fd7d3145254b 848 SUPERFAMILY SSF101353 240 451 5.36E-59 T 11-11-2016 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 SHALO_RS02955 da57b1cc5bec96e56650e6ffb83fcf22 436 Gene3D G3DSA:2.40.50.140 367 433 3.2E-9 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold SHALO_RS02955 da57b1cc5bec96e56650e6ffb83fcf22 436 Pfam PF00919 Uncharacterized protein family UPF0004 3 98 3.2E-25 T 11-11-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 SHALO_RS02955 da57b1cc5bec96e56650e6ffb83fcf22 436 SMART SM00729 135 352 6.1E-41 T 11-11-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 SHALO_RS02955 da57b1cc5bec96e56650e6ffb83fcf22 436 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 2 432 54.414 T 11-11-2016 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 SHALO_RS02955 da57b1cc5bec96e56650e6ffb83fcf22 436 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 3 390 5.9E-100 T 11-11-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 SHALO_RS02955 da57b1cc5bec96e56650e6ffb83fcf22 436 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 3 427 2.7E-116 T 11-11-2016 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 SHALO_RS02955 da57b1cc5bec96e56650e6ffb83fcf22 436 Gene3D G3DSA:3.80.30.20 136 361 1.1E-64 T 11-11-2016 IPR023404 Radical SAM, alpha/beta horseshoe SHALO_RS02955 da57b1cc5bec96e56650e6ffb83fcf22 436 SUPERFAMILY SSF102114 114 355 3.27E-48 T 11-11-2016 SHALO_RS02955 da57b1cc5bec96e56650e6ffb83fcf22 436 Pfam PF04055 Radical SAM superfamily 141 309 8.0E-22 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SHALO_RS02955 da57b1cc5bec96e56650e6ffb83fcf22 436 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 139 159 - T 11-11-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 SHALO_RS14790 5504a35a48f3ea06d4b27974bbbed9e9 374 SUPERFAMILY SSF56300 152 369 4.88E-39 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like SHALO_RS14790 5504a35a48f3ea06d4b27974bbbed9e9 374 Pfam PF00149 Calcineurin-like phosphoesterase 151 313 1.4E-10 T 11-11-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 SHALO_RS14790 5504a35a48f3ea06d4b27974bbbed9e9 374 Gene3D G3DSA:3.60.21.10 150 320 1.7E-28 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like SHALO_RS02555 45f6f8d6a62ba52d234f635132622ef2 164 SUPERFAMILY SSF54862 53 161 1.76E-20 T 11-11-2016 SHALO_RS02555 45f6f8d6a62ba52d234f635132622ef2 164 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 16 164 27.414 T 11-11-2016 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS02555 45f6f8d6a62ba52d234f635132622ef2 164 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 117 128 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_RS02555 45f6f8d6a62ba52d234f635132622ef2 164 Gene3D G3DSA:3.30.70.20 58 135 9.7E-15 T 11-11-2016 SHALO_RS02555 45f6f8d6a62ba52d234f635132622ef2 164 Pfam PF12838 4Fe-4S dicluster domain 75 131 1.4E-8 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_RS02555 45f6f8d6a62ba52d234f635132622ef2 164 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 76 87 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_RS08485 cfe41e8a7dcb522cd94e1639b6d8f541 265 SUPERFAMILY SSF55073 105 262 1.65E-45 T 11-11-2016 IPR029787 Nucleotide cyclase SHALO_RS08485 cfe41e8a7dcb522cd94e1639b6d8f541 265 Gene3D G3DSA:3.30.70.270 102 263 1.3E-49 T 11-11-2016 SHALO_RS08485 cfe41e8a7dcb522cd94e1639b6d8f541 265 Pfam PF00990 Diguanylate cyclase, GGDEF domain 100 259 1.2E-44 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS08485 cfe41e8a7dcb522cd94e1639b6d8f541 265 SMART SM00267 89 264 8.3E-52 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS08485 cfe41e8a7dcb522cd94e1639b6d8f541 265 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 97 263 4.8E-46 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS00195 6fe239eeedbed2c8ab0a57f3d33d2f0e 188 ProSitePatterns PS01081 TetR-type HTH domain signature. 20 50 - T 11-11-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site SHALO_RS00195 6fe239eeedbed2c8ab0a57f3d33d2f0e 188 Pfam PF00440 Bacterial regulatory proteins, tetR family 9 53 3.3E-10 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SHALO_RS00195 6fe239eeedbed2c8ab0a57f3d33d2f0e 188 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 8 21 4.6E-5 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SHALO_RS00195 6fe239eeedbed2c8ab0a57f3d33d2f0e 188 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 29 52 4.6E-5 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SHALO_RS00195 6fe239eeedbed2c8ab0a57f3d33d2f0e 188 Pfam PF16925 Bacterial transcriptional repressor C-terminal 81 173 4.8E-12 T 11-11-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal SHALO_RS00195 6fe239eeedbed2c8ab0a57f3d33d2f0e 188 Gene3D G3DSA:1.10.357.10 4 185 3.2E-31 T 11-11-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SHALO_RS00195 6fe239eeedbed2c8ab0a57f3d33d2f0e 188 SUPERFAMILY SSF46689 3 68 1.33E-13 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 SHALO_RS00195 6fe239eeedbed2c8ab0a57f3d33d2f0e 188 SUPERFAMILY SSF48498 87 184 1.81E-16 T 11-11-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal SHALO_RS05755 3cc3fcc36656cbc08d5044c05651bba8 451 PRINTS PR01874 DNA repair protein radA signature 213 241 2.6E-88 T 11-11-2016 SHALO_RS05755 3cc3fcc36656cbc08d5044c05651bba8 451 PRINTS PR01874 DNA repair protein radA signature 124 141 2.6E-88 T 11-11-2016 SHALO_RS05755 3cc3fcc36656cbc08d5044c05651bba8 451 PRINTS PR01874 DNA repair protein radA signature 248 274 2.6E-88 T 11-11-2016 SHALO_RS05755 3cc3fcc36656cbc08d5044c05651bba8 451 PRINTS PR01874 DNA repair protein radA signature 321 344 2.6E-88 T 11-11-2016 SHALO_RS05755 3cc3fcc36656cbc08d5044c05651bba8 451 PRINTS PR01874 DNA repair protein radA signature 82 110 2.6E-88 T 11-11-2016 SHALO_RS05755 3cc3fcc36656cbc08d5044c05651bba8 451 PRINTS PR01874 DNA repair protein radA signature 10 34 2.6E-88 T 11-11-2016 SHALO_RS05755 3cc3fcc36656cbc08d5044c05651bba8 451 PRINTS PR01874 DNA repair protein radA signature 174 198 2.6E-88 T 11-11-2016 SHALO_RS05755 3cc3fcc36656cbc08d5044c05651bba8 451 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 447 1.4E-184 T 11-11-2016 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 SHALO_RS05755 3cc3fcc36656cbc08d5044c05651bba8 451 Hamap MF_01498 DNA repair protein RadA [radA]. 21 449 41.586 T 11-11-2016 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 SHALO_RS05755 3cc3fcc36656cbc08d5044c05651bba8 451 Pfam PF13481 AAA domain 68 222 7.6E-14 T 11-11-2016 SHALO_RS05755 3cc3fcc36656cbc08d5044c05651bba8 451 SUPERFAMILY SSF52540 68 288 5.89E-50 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS05755 3cc3fcc36656cbc08d5044c05651bba8 451 SUPERFAMILY SSF54211 302 450 5.69E-33 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SHALO_RS05755 3cc3fcc36656cbc08d5044c05651bba8 451 SUPERFAMILY SSF54211 255 269 5.69E-33 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SHALO_RS05755 3cc3fcc36656cbc08d5044c05651bba8 451 Pfam PF13541 Subunit ChlI of Mg-chelatase 346 427 3.7E-8 T 11-11-2016 SHALO_RS05755 3cc3fcc36656cbc08d5044c05651bba8 451 SMART SM00382 90 244 5.4E-14 T 11-11-2016 IPR003593 AAA+ ATPase domain SHALO_RS05755 3cc3fcc36656cbc08d5044c05651bba8 451 Gene3D G3DSA:3.40.50.300 61 276 3.5E-51 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS05755 3cc3fcc36656cbc08d5044c05651bba8 451 Gene3D G3DSA:3.30.230.10 288 450 4.9E-28 T 11-11-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SHALO_RS10045 88e7d3257561ea9039fb9c262e960451 815 SUPERFAMILY SSF47323 628 815 1.81E-19 T 11-11-2016 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 SHALO_RS10045 88e7d3257561ea9039fb9c262e960451 815 Gene3D G3DSA:1.10.730.10 613 737 1.5E-26 T 11-11-2016 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 SHALO_RS10045 88e7d3257561ea9039fb9c262e960451 815 SUPERFAMILY SSF52374 1 225 1.38E-139 T 11-11-2016 SHALO_RS10045 88e7d3257561ea9039fb9c262e960451 815 SUPERFAMILY SSF52374 421 632 1.38E-139 T 11-11-2016 SHALO_RS10045 88e7d3257561ea9039fb9c262e960451 815 PRINTS PR00985 Leucyl-tRNA synthetase signature 566 576 1.9E-40 T 11-11-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 SHALO_RS10045 88e7d3257561ea9039fb9c262e960451 815 PRINTS PR00985 Leucyl-tRNA synthetase signature 125 142 1.9E-40 T 11-11-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 SHALO_RS10045 88e7d3257561ea9039fb9c262e960451 815 PRINTS PR00985 Leucyl-tRNA synthetase signature 151 167 1.9E-40 T 11-11-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 SHALO_RS10045 88e7d3257561ea9039fb9c262e960451 815 PRINTS PR00985 Leucyl-tRNA synthetase signature 214 233 1.9E-40 T 11-11-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 SHALO_RS10045 88e7d3257561ea9039fb9c262e960451 815 PRINTS PR00985 Leucyl-tRNA synthetase signature 492 510 1.9E-40 T 11-11-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 SHALO_RS10045 88e7d3257561ea9039fb9c262e960451 815 PRINTS PR00985 Leucyl-tRNA synthetase signature 183 196 1.9E-40 T 11-11-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 SHALO_RS10045 88e7d3257561ea9039fb9c262e960451 815 PRINTS PR00985 Leucyl-tRNA synthetase signature 533 555 1.9E-40 T 11-11-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 SHALO_RS10045 88e7d3257561ea9039fb9c262e960451 815 Gene3D G3DSA:3.40.50.620 430 612 1.3E-144 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHALO_RS10045 88e7d3257561ea9039fb9c262e960451 815 Gene3D G3DSA:3.40.50.620 1 221 1.3E-144 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHALO_RS10045 88e7d3257561ea9039fb9c262e960451 815 Pfam PF09334 tRNA synthetases class I (M) 34 174 2.0E-21 T 11-11-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 SHALO_RS10045 88e7d3257561ea9039fb9c262e960451 815 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 422 623 5.1E-23 T 11-11-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 SHALO_RS10045 88e7d3257561ea9039fb9c262e960451 815 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 40 51 - T 11-11-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 SHALO_RS10045 88e7d3257561ea9039fb9c262e960451 815 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 220 408 7.0E-59 T 11-11-2016 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 SHALO_RS10045 88e7d3257561ea9039fb9c262e960451 815 SUPERFAMILY SSF50677 225 420 5.13E-44 T 11-11-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 SHALO_RS10045 88e7d3257561ea9039fb9c262e960451 815 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 3 580 3.4E-252 T 11-11-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 SHALO_RS10045 88e7d3257561ea9039fb9c262e960451 815 Gene3D G3DSA:3.90.740.10 222 429 4.9E-51 T 11-11-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 SHALO_RS10045 88e7d3257561ea9039fb9c262e960451 815 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 2 814 20.929 T 11-11-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 SHALO_RS14545 8b36ee538f8df9b3ab73e16f02efb8d9 443 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 3 442 2.2E-200 T 11-11-2016 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 SHALO_RS14545 8b36ee538f8df9b3ab73e16f02efb8d9 443 SUPERFAMILY SSF52440 2 114 3.24E-44 T 11-11-2016 IPR016185 Pre-ATP-grasp domain SHALO_RS14545 8b36ee538f8df9b3ab73e16f02efb8d9 443 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 322 1.0E-77 T 11-11-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SHALO_RS14545 8b36ee538f8df9b3ab73e16f02efb8d9 443 Gene3D G3DSA:3.30.470.20 204 441 1.5E-98 T 11-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SHALO_RS14545 8b36ee538f8df9b3ab73e16f02efb8d9 443 SMART SM00878 336 441 1.7E-60 T 11-11-2016 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 SHALO_RS14545 8b36ee538f8df9b3ab73e16f02efb8d9 443 Pfam PF00289 Biotin carboxylase, N-terminal domain 3 111 5.0E-41 T 11-11-2016 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 SHALO_RS14545 8b36ee538f8df9b3ab73e16f02efb8d9 443 SUPERFAMILY SSF56059 84 347 6.19E-66 T 11-11-2016 SHALO_RS14545 8b36ee538f8df9b3ab73e16f02efb8d9 443 Gene3D G3DSA:3.30.1490.20 131 203 9.3E-28 T 11-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SHALO_RS14545 8b36ee538f8df9b3ab73e16f02efb8d9 443 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 3.6E-39 T 11-11-2016 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 SHALO_RS14545 8b36ee538f8df9b3ab73e16f02efb8d9 443 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 287 294 - T 11-11-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SHALO_RS14545 8b36ee538f8df9b3ab73e16f02efb8d9 443 SUPERFAMILY SSF51246 331 442 1.2E-42 T 11-11-2016 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780|Reactome: R-HSA-3371599 SHALO_RS14545 8b36ee538f8df9b3ab73e16f02efb8d9 443 Gene3D G3DSA:3.40.50.20 3 130 7.9E-47 T 11-11-2016 IPR016185 Pre-ATP-grasp domain SHALO_RS03855 bceccb4e8e7f3d611303500ce98dcc8d 224 Gene3D G3DSA:3.40.50.10090 45 152 1.8E-14 T 11-11-2016 SHALO_RS03855 bceccb4e8e7f3d611303500ce98dcc8d 224 Pfam PF02602 Uroporphyrinogen-III synthase HemD 29 216 2.2E-24 T 11-11-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 SHALO_RS03855 bceccb4e8e7f3d611303500ce98dcc8d 224 SUPERFAMILY SSF69618 29 221 1.07E-32 T 11-11-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 SHALO_RS06510 c57f2cbe1fc4e5e0aa451dff24bfbdb5 474 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 154 451 4.5E-27 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHALO_RS06510 c57f2cbe1fc4e5e0aa451dff24bfbdb5 474 Gene3D G3DSA:1.10.1060.10 3 155 2.3E-33 T 11-11-2016 SHALO_RS06510 c57f2cbe1fc4e5e0aa451dff24bfbdb5 474 Gene3D G3DSA:3.50.50.60 156 249 2.7E-22 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHALO_RS06510 c57f2cbe1fc4e5e0aa451dff24bfbdb5 474 SUPERFAMILY SSF51971 153 399 1.47E-59 T 11-11-2016 SHALO_RS06510 c57f2cbe1fc4e5e0aa451dff24bfbdb5 474 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 22 141 1.0E-26 T 11-11-2016 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 SHALO_RS06510 c57f2cbe1fc4e5e0aa451dff24bfbdb5 474 SUPERFAMILY SSF46548 11 164 4.18E-27 T 11-11-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 SHALO_RS06510 c57f2cbe1fc4e5e0aa451dff24bfbdb5 474 Gene3D G3DSA:3.50.50.60 386 463 1.7E-11 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHALO_RS06510 c57f2cbe1fc4e5e0aa451dff24bfbdb5 474 Gene3D G3DSA:3.50.50.60 250 385 2.6E-42 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHALO_RS06510 c57f2cbe1fc4e5e0aa451dff24bfbdb5 474 PRINTS PR00419 Adrenodoxin reductase family signature 178 191 9.4E-27 T 11-11-2016 SHALO_RS06510 c57f2cbe1fc4e5e0aa451dff24bfbdb5 474 PRINTS PR00419 Adrenodoxin reductase family signature 293 307 9.4E-27 T 11-11-2016 SHALO_RS06510 c57f2cbe1fc4e5e0aa451dff24bfbdb5 474 PRINTS PR00419 Adrenodoxin reductase family signature 327 340 9.4E-27 T 11-11-2016 SHALO_RS06510 c57f2cbe1fc4e5e0aa451dff24bfbdb5 474 PRINTS PR00419 Adrenodoxin reductase family signature 155 177 9.4E-27 T 11-11-2016 SHALO_RS06510 c57f2cbe1fc4e5e0aa451dff24bfbdb5 474 PRINTS PR00419 Adrenodoxin reductase family signature 220 230 9.4E-27 T 11-11-2016 SHALO_RS06510 c57f2cbe1fc4e5e0aa451dff24bfbdb5 474 SUPERFAMILY SSF51971 338 463 4.36E-10 T 11-11-2016 SHALO_RS07260 a874abc77ce4f966776c5dc436089b0f 354 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 88 107 - T 11-11-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 SHALO_RS07260 a874abc77ce4f966776c5dc436089b0f 354 Gene3D G3DSA:3.20.20.70 6 352 4.7E-107 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_RS07260 a874abc77ce4f966776c5dc436089b0f 354 PIRSF PIRSF000164 19 354 1.6E-94 T 11-11-2016 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 SHALO_RS07260 a874abc77ce4f966776c5dc436089b0f 354 Pfam PF01180 Dihydroorotate dehydrogenase 53 337 7.5E-73 T 11-11-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 SHALO_RS07260 a874abc77ce4f966776c5dc436089b0f 354 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 289 309 - T 11-11-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 SHALO_RS07260 a874abc77ce4f966776c5dc436089b0f 354 SUPERFAMILY SSF51395 7 352 1.44E-88 T 11-11-2016 SHALO_RS07260 a874abc77ce4f966776c5dc436089b0f 354 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 7 354 1.7E-118 T 11-11-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 SHALO_RS00775 44019b9f8badf011e46d91c4d9c86958 396 Pfam PF07690 Major Facilitator Superfamily 18 352 4.2E-17 T 11-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SHALO_RS00775 44019b9f8badf011e46d91c4d9c86958 396 SUPERFAMILY SSF103473 10 389 3.4E-27 T 11-11-2016 IPR020846 Major facilitator superfamily domain SHALO_RS00775 44019b9f8badf011e46d91c4d9c86958 396 Gene3D G3DSA:1.20.1250.20 224 387 3.9E-6 T 11-11-2016 SHALO_RS00775 44019b9f8badf011e46d91c4d9c86958 396 Gene3D G3DSA:1.20.1250.20 18 190 3.8E-15 T 11-11-2016 SHALO_RS12025 152af9211576c536f92ee166fae12faa 415 SMART SM00788 3 414 2.9E-253 T 11-11-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 SHALO_RS12025 152af9211576c536f92ee166fae12faa 415 Gene3D G3DSA:3.90.170.10 261 415 1.2E-64 T 11-11-2016 SHALO_RS12025 152af9211576c536f92ee166fae12faa 415 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 415 181.134 T 11-11-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 SHALO_RS12025 152af9211576c536f92ee166fae12faa 415 Pfam PF00709 Adenylosuccinate synthetase 5 413 1.1E-166 T 11-11-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 SHALO_RS12025 152af9211576c536f92ee166fae12faa 415 SUPERFAMILY SSF52540 1 414 2.04E-157 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS12025 152af9211576c536f92ee166fae12faa 415 Gene3D G3DSA:1.10.300.10 97 189 1.5E-22 T 11-11-2016 SHALO_RS12025 152af9211576c536f92ee166fae12faa 415 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 128 139 - T 11-11-2016 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 SHALO_RS12025 152af9211576c536f92ee166fae12faa 415 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 415 1.7E-162 T 11-11-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 SHALO_RS12025 152af9211576c536f92ee166fae12faa 415 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 10 17 - T 11-11-2016 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 SHALO_RS12025 152af9211576c536f92ee166fae12faa 415 Gene3D G3DSA:3.40.440.10 1 93 8.4E-71 T 11-11-2016 SHALO_RS12025 152af9211576c536f92ee166fae12faa 415 Gene3D G3DSA:3.40.440.10 190 260 8.4E-71 T 11-11-2016 SHALO_RS06430 def5ca9d6bd5b9d6977a7a5c3632d3ce 552 Pfam PF00732 GMC oxidoreductase 7 297 9.2E-8 T 11-11-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 SHALO_RS06430 def5ca9d6bd5b9d6977a7a5c3632d3ce 552 Gene3D G3DSA:3.50.50.60 216 322 1.4E-61 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHALO_RS06430 def5ca9d6bd5b9d6977a7a5c3632d3ce 552 Gene3D G3DSA:3.50.50.60 477 544 1.4E-61 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHALO_RS06430 def5ca9d6bd5b9d6977a7a5c3632d3ce 552 Gene3D G3DSA:3.50.50.60 427 440 1.4E-61 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHALO_RS06430 def5ca9d6bd5b9d6977a7a5c3632d3ce 552 Gene3D G3DSA:3.50.50.60 2 144 1.4E-61 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHALO_RS06430 def5ca9d6bd5b9d6977a7a5c3632d3ce 552 Pfam PF05199 GMC oxidoreductase 417 537 1.2E-14 T 11-11-2016 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 SHALO_RS06430 def5ca9d6bd5b9d6977a7a5c3632d3ce 552 SUPERFAMILY SSF51905 1 325 7.63E-51 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHALO_RS06430 def5ca9d6bd5b9d6977a7a5c3632d3ce 552 SUPERFAMILY SSF51905 486 545 7.63E-51 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHALO_RS03045 730e05c45fbb5f04206e32e2a2d8a669 166 Gene3D G3DSA:2.102.10.10 9 154 9.3E-27 T 11-11-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 SHALO_RS03045 730e05c45fbb5f04206e32e2a2d8a669 166 SUPERFAMILY SSF50022 45 152 1.23E-23 T 11-11-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 SHALO_RS03045 730e05c45fbb5f04206e32e2a2d8a669 166 PRINTS PR00162 Rieske 2Fe-2S subunit signature 91 102 5.4E-7 T 11-11-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 SHALO_RS03045 730e05c45fbb5f04206e32e2a2d8a669 166 PRINTS PR00162 Rieske 2Fe-2S subunit signature 112 124 5.4E-7 T 11-11-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 SHALO_RS03045 730e05c45fbb5f04206e32e2a2d8a669 166 PRINTS PR00162 Rieske 2Fe-2S subunit signature 124 136 5.4E-7 T 11-11-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 SHALO_RS03045 730e05c45fbb5f04206e32e2a2d8a669 166 Pfam PF00355 Rieske [2Fe-2S] domain 57 139 6.9E-11 T 11-11-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 SHALO_RS07290 bdb921a1e9a3eaf6e5977ebd72cfe712 344 Gene3D G3DSA:3.30.1490.20 142 205 1.0E-17 T 11-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SHALO_RS07290 bdb921a1e9a3eaf6e5977ebd72cfe712 344 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 95 106 - T 11-11-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 SHALO_RS07290 bdb921a1e9a3eaf6e5977ebd72cfe712 344 SUPERFAMILY SSF56059 128 308 1.28E-32 T 11-11-2016 SHALO_RS07290 bdb921a1e9a3eaf6e5977ebd72cfe712 344 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 3 311 4.9E-86 T 11-11-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 SHALO_RS07290 bdb921a1e9a3eaf6e5977ebd72cfe712 344 Pfam PF01820 D-ala D-ala ligase N-terminus 3 117 5.6E-19 T 11-11-2016 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 SHALO_RS07290 bdb921a1e9a3eaf6e5977ebd72cfe712 344 SUPERFAMILY SSF52440 1 127 8.82E-27 T 11-11-2016 IPR016185 Pre-ATP-grasp domain SHALO_RS07290 bdb921a1e9a3eaf6e5977ebd72cfe712 344 Pfam PF07478 D-ala D-ala ligase C-terminus 137 302 2.4E-32 T 11-11-2016 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 SHALO_RS07290 bdb921a1e9a3eaf6e5977ebd72cfe712 344 Gene3D G3DSA:3.40.50.20 1 117 3.7E-20 T 11-11-2016 IPR016185 Pre-ATP-grasp domain SHALO_RS07290 bdb921a1e9a3eaf6e5977ebd72cfe712 344 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 274 301 - T 11-11-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 SHALO_RS07290 bdb921a1e9a3eaf6e5977ebd72cfe712 344 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 1 330 28.452 T 11-11-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 SHALO_RS07290 bdb921a1e9a3eaf6e5977ebd72cfe712 344 Gene3D G3DSA:3.30.470.20 208 305 5.4E-19 T 11-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SHALO_RS07290 bdb921a1e9a3eaf6e5977ebd72cfe712 344 Gene3D G3DSA:3.30.470.20 120 141 5.4E-19 T 11-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SHALO_RS04585 69bc81d293c5ae420226c89fbac27b37 423 Gene3D G3DSA:3.30.565.10 308 414 3.4E-11 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS04585 69bc81d293c5ae420226c89fbac27b37 423 SUPERFAMILY SSF55874 289 415 2.01E-13 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS04585 69bc81d293c5ae420226c89fbac27b37 423 Gene3D G3DSA:1.10.287.130 211 279 5.6E-4 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS04585 69bc81d293c5ae420226c89fbac27b37 423 SUPERFAMILY SSF47384 203 265 4.12E-6 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS04585 69bc81d293c5ae420226c89fbac27b37 423 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 333 413 9.9E-8 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS09595 693980af430c2995753caaa28c1743c5 106 SMART SM00418 7 84 1.3E-22 T 11-11-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SHALO_RS09595 693980af430c2995753caaa28c1743c5 106 Gene3D G3DSA:1.10.10.10 5 75 2.6E-25 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS09595 693980af430c2995753caaa28c1743c5 106 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 8 23 1.3E-16 T 11-11-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SHALO_RS09595 693980af430c2995753caaa28c1743c5 106 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 41 56 1.3E-16 T 11-11-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SHALO_RS09595 693980af430c2995753caaa28c1743c5 106 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 56 71 1.3E-16 T 11-11-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SHALO_RS09595 693980af430c2995753caaa28c1743c5 106 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 28 39 1.3E-16 T 11-11-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SHALO_RS09595 693980af430c2995753caaa28c1743c5 106 SUPERFAMILY SSF46785 4 85 2.0E-22 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS09595 693980af430c2995753caaa28c1743c5 106 Pfam PF01022 Bacterial regulatory protein, arsR family 13 59 1.4E-14 T 11-11-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SHALO_RS13235 763adaf1b52ccc01833c4caa1a125da2 195 Pfam PF02635 DsrE/DsrF-like family 127 170 2.8E-5 T 11-11-2016 IPR003787 Sulphur relay, DsrE/F-like protein SHALO_RS13235 763adaf1b52ccc01833c4caa1a125da2 195 Gene3D G3DSA:3.30.110.40 2 71 3.2E-16 T 11-11-2016 IPR001455 TusA-like domain SHALO_RS13235 763adaf1b52ccc01833c4caa1a125da2 195 TIGRFAM TIGR03527 selenium_YedF: selenium metabolism protein YedF 3 194 5.4E-56 T 11-11-2016 IPR019870 Selenium metabolism protein YedF SHALO_RS13235 763adaf1b52ccc01833c4caa1a125da2 195 SUPERFAMILY SSF75169 92 176 1.55E-10 T 11-11-2016 IPR027396 DsrEFH-like SHALO_RS13235 763adaf1b52ccc01833c4caa1a125da2 195 SUPERFAMILY SSF64307 2 70 1.18E-15 T 11-11-2016 IPR001455 TusA-like domain SHALO_RS13235 763adaf1b52ccc01833c4caa1a125da2 195 Gene3D G3DSA:3.40.1260.10 122 177 1.4E-8 T 11-11-2016 IPR027396 DsrEFH-like SHALO_RS13235 763adaf1b52ccc01833c4caa1a125da2 195 Pfam PF01206 Sulfurtransferase TusA 2 68 5.1E-16 T 11-11-2016 IPR001455 TusA-like domain SHALO_RS02045 261eb8b68c034bc2d932b6bb695bf8f4 340 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 3 335 2.7E-115 T 11-11-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 SHALO_RS02045 261eb8b68c034bc2d932b6bb695bf8f4 340 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 136 152 - T 11-11-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 SHALO_RS02045 261eb8b68c034bc2d932b6bb695bf8f4 340 SUPERFAMILY SSF51726 3 335 4.36E-106 T 11-11-2016 SHALO_RS02045 261eb8b68c034bc2d932b6bb695bf8f4 340 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 3 335 3.0E-129 T 11-11-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 SHALO_RS02045 261eb8b68c034bc2d932b6bb695bf8f4 340 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 5 338 45.805 T 11-11-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 SHALO_RS02045 261eb8b68c034bc2d932b6bb695bf8f4 340 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 16 25 - T 11-11-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 SHALO_RS02045 261eb8b68c034bc2d932b6bb695bf8f4 340 Gene3D G3DSA:3.20.20.210 3 336 3.3E-131 T 11-11-2016 SHALO_RS12455 accfbf9fab31b78290ba4617f7a16565 372 Gene3D G3DSA:1.10.760.10 105 235 2.1E-10 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS12455 accfbf9fab31b78290ba4617f7a16565 372 SUPERFAMILY SSF46626 103 204 2.84E-13 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS12455 accfbf9fab31b78290ba4617f7a16565 372 SUPERFAMILY SSF46626 5 21 2.84E-13 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS12455 accfbf9fab31b78290ba4617f7a16565 372 PRINTS PR00607 Class IE cytochrome C signature 357 368 5.0E-13 T 11-11-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 SHALO_RS12455 accfbf9fab31b78290ba4617f7a16565 372 PRINTS PR00607 Class IE cytochrome C signature 342 354 5.0E-13 T 11-11-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 SHALO_RS12455 accfbf9fab31b78290ba4617f7a16565 372 PRINTS PR00607 Class IE cytochrome C signature 303 314 5.0E-13 T 11-11-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 SHALO_RS12455 accfbf9fab31b78290ba4617f7a16565 372 PRINTS PR00607 Class IE cytochrome C signature 314 324 5.0E-13 T 11-11-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 SHALO_RS12455 accfbf9fab31b78290ba4617f7a16565 372 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 295 367 3.0E-14 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS12455 accfbf9fab31b78290ba4617f7a16565 372 SUPERFAMILY SSF46626 295 370 1.06E-13 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS12455 accfbf9fab31b78290ba4617f7a16565 372 Gene3D G3DSA:1.10.760.10 296 370 6.3E-27 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS13395 77886bbfb699ae608bd78603b3f401d3 692 Gene3D G3DSA:2.170.130.10 19 142 2.8E-16 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SHALO_RS13395 77886bbfb699ae608bd78603b3f401d3 692 SUPERFAMILY SSF56935 17 689 2.07E-65 T 11-11-2016 SHALO_RS13395 77886bbfb699ae608bd78603b3f401d3 692 Pfam PF07715 TonB-dependent Receptor Plug Domain 54 139 1.1E-9 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SHALO_RS13395 77886bbfb699ae608bd78603b3f401d3 692 Gene3D G3DSA:2.40.170.20 143 692 6.9E-53 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SHALO_RS13395 77886bbfb699ae608bd78603b3f401d3 692 Pfam PF00593 TonB dependent receptor 441 666 9.2E-19 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SHALO_RS08565 11f6dd43c4ad4756fc705c69e207dbc4 255 Pfam PF02540 NAD synthase 11 246 3.8E-76 T 11-11-2016 IPR022310 NAD/GMP synthase SHALO_RS08565 11f6dd43c4ad4756fc705c69e207dbc4 255 Hamap MF_00193 NH(3)-dependent NAD(+) synthetase [nadE]. 2 249 32.157 T 11-11-2016 IPR022926 NH(3)-dependent NAD(+) synthetase GO:0008795|GO:0009435 KEGG: 00760+6.3.1.5 SHALO_RS08565 11f6dd43c4ad4756fc705c69e207dbc4 255 Gene3D G3DSA:3.40.50.620 5 249 4.3E-70 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHALO_RS08565 11f6dd43c4ad4756fc705c69e207dbc4 255 TIGRFAM TIGR00552 nadE: NAD+ synthetase 5 249 9.0E-74 T 11-11-2016 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 SHALO_RS08565 11f6dd43c4ad4756fc705c69e207dbc4 255 SUPERFAMILY SSF52402 4 248 5.29E-68 T 11-11-2016 SHALO_RS06765 c9e598bb82910d6c763138079d526191 474 Pfam PF02321 Outer membrane efflux protein 275 458 4.0E-27 T 11-11-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SHALO_RS06765 c9e598bb82910d6c763138079d526191 474 Pfam PF02321 Outer membrane efflux protein 61 248 1.0E-26 T 11-11-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SHALO_RS06765 c9e598bb82910d6c763138079d526191 474 Gene3D G3DSA:1.20.1600.10 348 462 1.0E-93 T 11-11-2016 SHALO_RS06765 c9e598bb82910d6c763138079d526191 474 Gene3D G3DSA:1.20.1600.10 136 310 1.0E-93 T 11-11-2016 SHALO_RS06765 c9e598bb82910d6c763138079d526191 474 Gene3D G3DSA:1.20.1600.10 47 85 1.0E-93 T 11-11-2016 SHALO_RS06765 c9e598bb82910d6c763138079d526191 474 SUPERFAMILY SSF56954 2 463 4.84E-106 T 11-11-2016 SHALO_RS06765 c9e598bb82910d6c763138079d526191 474 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 10 461 1.3E-110 T 11-11-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 SHALO_RS06765 c9e598bb82910d6c763138079d526191 474 Gene3D G3DSA:2.20.200.10 311 346 9.1E-19 T 11-11-2016 SHALO_RS06765 c9e598bb82910d6c763138079d526191 474 Gene3D G3DSA:2.20.200.10 95 135 9.1E-19 T 11-11-2016 SHALO_RS02765 22e80d5504261a4243046323b53f9e26 790 Pfam PF00350 Dynamin family 197 394 9.3E-29 T 11-11-2016 IPR022812 Dynamin superfamily SHALO_RS02765 22e80d5504261a4243046323b53f9e26 790 SUPERFAMILY SSF52540 176 254 9.14E-30 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS02765 22e80d5504261a4243046323b53f9e26 790 SUPERFAMILY SSF52540 311 417 9.14E-30 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS02765 22e80d5504261a4243046323b53f9e26 790 Gene3D G3DSA:3.40.50.300 316 417 5.9E-23 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS02765 22e80d5504261a4243046323b53f9e26 790 Gene3D G3DSA:3.40.50.300 189 229 5.9E-23 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS01370 7a0c2d3f49161a0c31ea14132e7ef294 137 Gene3D G3DSA:3.30.70.141 2 136 2.2E-58 T 11-11-2016 SHALO_RS01370 7a0c2d3f49161a0c31ea14132e7ef294 137 Pfam PF00334 Nucleoside diphosphate kinase 2 136 3.6E-55 T 11-11-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SHALO_RS01370 7a0c2d3f49161a0c31ea14132e7ef294 137 SUPERFAMILY SSF54919 2 136 7.99E-57 T 11-11-2016 SHALO_RS01370 7a0c2d3f49161a0c31ea14132e7ef294 137 SMART SM00562 1 137 7.2E-79 T 11-11-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SHALO_RS01370 7a0c2d3f49161a0c31ea14132e7ef294 137 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 112 120 - T 11-11-2016 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SHALO_RS01370 7a0c2d3f49161a0c31ea14132e7ef294 137 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 1 136 34.308 T 11-11-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SHALO_RS01370 7a0c2d3f49161a0c31ea14132e7ef294 137 PRINTS PR01243 Nucleoside diphosphate kinase signature 68 85 2.6E-40 T 11-11-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SHALO_RS01370 7a0c2d3f49161a0c31ea14132e7ef294 137 PRINTS PR01243 Nucleoside diphosphate kinase signature 4 26 2.6E-40 T 11-11-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SHALO_RS01370 7a0c2d3f49161a0c31ea14132e7ef294 137 PRINTS PR01243 Nucleoside diphosphate kinase signature 48 67 2.6E-40 T 11-11-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SHALO_RS01370 7a0c2d3f49161a0c31ea14132e7ef294 137 PRINTS PR01243 Nucleoside diphosphate kinase signature 89 105 2.6E-40 T 11-11-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SHALO_RS01370 7a0c2d3f49161a0c31ea14132e7ef294 137 PRINTS PR01243 Nucleoside diphosphate kinase signature 112 131 2.6E-40 T 11-11-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SHALO_RS00220 4920663079d2cbaaa8bbee473561ad9a 264 Pfam PF01875 Memo-like protein 7 261 3.2E-49 T 11-11-2016 IPR002737 MEMO1 family Reactome: R-HSA-6785631 SHALO_RS00220 4920663079d2cbaaa8bbee473561ad9a 264 TIGRFAM TIGR04336 AmmeMemoSam_B: AmmeMemoRadiSam system protein B 5 262 5.4E-76 T 11-11-2016 IPR002737 MEMO1 family Reactome: R-HSA-6785631 SHALO_RS00220 4920663079d2cbaaa8bbee473561ad9a 264 Hamap MF_00055 MEMO1 family protein . 3 264 47.854 T 11-11-2016 IPR002737 MEMO1 family Reactome: R-HSA-6785631 SHALO_RS08300 3ff2a7e251ff2ccce8933d514b65f735 169 Gene3D G3DSA:3.40.50.1820 19 167 1.3E-9 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold SHALO_RS08300 3ff2a7e251ff2ccce8933d514b65f735 169 SUPERFAMILY SSF53474 114 168 1.55E-10 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold SHALO_RS08300 3ff2a7e251ff2ccce8933d514b65f735 169 SUPERFAMILY SSF53474 11 58 1.55E-10 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold SHALO_RS00255 24914f9c46382d098202440d53ec9b8d 428 SUPERFAMILY SSF51905 357 426 2.7E-26 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHALO_RS00255 24914f9c46382d098202440d53ec9b8d 428 SUPERFAMILY SSF51905 9 192 2.7E-26 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHALO_RS00255 24914f9c46382d098202440d53ec9b8d 428 Gene3D G3DSA:3.50.50.60 113 206 5.5E-25 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHALO_RS00255 24914f9c46382d098202440d53ec9b8d 428 Gene3D G3DSA:3.50.50.60 394 425 5.5E-25 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHALO_RS00255 24914f9c46382d098202440d53ec9b8d 428 Gene3D G3DSA:3.50.50.60 8 60 5.5E-25 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHALO_RS00255 24914f9c46382d098202440d53ec9b8d 428 Pfam PF01946 Thi4 family 10 57 1.2E-6 T 11-11-2016 SHALO_RS09300 80066ccff60fa5c5173a7661a6d5c2c7 444 Pfam PF13353 4Fe-4S single cluster domain 99 161 3.0E-6 T 11-11-2016 SHALO_RS09300 80066ccff60fa5c5173a7661a6d5c2c7 444 Gene3D G3DSA:3.20.20.70 79 342 1.5E-57 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_RS09300 80066ccff60fa5c5173a7661a6d5c2c7 444 Pfam PF04055 Radical SAM superfamily 96 256 1.4E-17 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SHALO_RS09300 80066ccff60fa5c5173a7661a6d5c2c7 444 SMART SM00729 92 299 0.0098 T 11-11-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 SHALO_RS09300 80066ccff60fa5c5173a7661a6d5c2c7 444 SUPERFAMILY SSF102114 81 303 1.31E-45 T 11-11-2016 SHALO_RS09300 80066ccff60fa5c5173a7661a6d5c2c7 444 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 98 109 - T 11-11-2016 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|Reactome: R-HSA-947581 SHALO_RS11915 31a03878cda98c652f3a0dca566c8c69 522 Gene3D G3DSA:3.50.50.60 463 522 1.1E-82 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHALO_RS11915 31a03878cda98c652f3a0dca566c8c69 522 Gene3D G3DSA:3.50.50.60 32 298 1.1E-82 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHALO_RS11915 31a03878cda98c652f3a0dca566c8c69 522 SUPERFAMILY SSF51905 36 315 3.63E-49 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHALO_RS11915 31a03878cda98c652f3a0dca566c8c69 522 SUPERFAMILY SSF51905 466 522 3.63E-49 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHALO_RS11915 31a03878cda98c652f3a0dca566c8c69 522 Gene3D G3DSA:3.90.700.10 316 458 4.6E-21 T 11-11-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_RS11915 31a03878cda98c652f3a0dca566c8c69 522 SUPERFAMILY SSF56425 300 467 8.37E-25 T 11-11-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_RS11915 31a03878cda98c652f3a0dca566c8c69 522 Pfam PF00890 FAD binding domain 47 507 1.4E-69 T 11-11-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_RS11915 31a03878cda98c652f3a0dca566c8c69 522 TIGRFAM TIGR01813 flavo_cyto_c: flavocytochrome c 47 520 7.2E-131 T 11-11-2016 IPR010960 Flavocytochrome c GO:0000104|GO:0055114 SHALO_RS01645 eb7ccaea86f65a59ff329021596039dd 350 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 186 346 2.1E-43 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS01645 eb7ccaea86f65a59ff329021596039dd 350 SUPERFAMILY SSF55073 195 348 1.41E-44 T 11-11-2016 IPR029787 Nucleotide cyclase SHALO_RS01645 eb7ccaea86f65a59ff329021596039dd 350 SMART SM00267 179 347 1.7E-48 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS01645 eb7ccaea86f65a59ff329021596039dd 350 Gene3D G3DSA:3.30.70.270 193 349 1.9E-48 T 11-11-2016 SHALO_RS01645 eb7ccaea86f65a59ff329021596039dd 350 Pfam PF00990 Diguanylate cyclase, GGDEF domain 192 342 1.3E-39 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS05045 0c5460030e29246441b565f94214bf90 546 SUPERFAMILY SSF54849 137 203 3.66E-25 T 11-11-2016 SHALO_RS05045 0c5460030e29246441b565f94214bf90 546 Gene3D G3DSA:1.10.560.10 366 516 1.6E-38 T 11-11-2016 IPR027413 GroEL-like equatorial domain SHALO_RS05045 0c5460030e29246441b565f94214bf90 546 SUPERFAMILY SSF48592 6 133 1.98E-75 T 11-11-2016 SHALO_RS05045 0c5460030e29246441b565f94214bf90 546 SUPERFAMILY SSF48592 405 519 1.98E-75 T 11-11-2016 SHALO_RS05045 0c5460030e29246441b565f94214bf90 546 ProSitePatterns PS00296 Chaperonins cpn60 signature. 404 415 - T 11-11-2016 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020 SHALO_RS05045 0c5460030e29246441b565f94214bf90 546 SUPERFAMILY SSF52029 184 375 4.01E-84 T 11-11-2016 IPR027409 GroEL-like apical domain SHALO_RS05045 0c5460030e29246441b565f94214bf90 546 PRINTS PR00298 60kDa chaperonin signature 82 109 8.9E-72 T 11-11-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 SHALO_RS05045 0c5460030e29246441b565f94214bf90 546 PRINTS PR00298 60kDa chaperonin signature 267 290 8.9E-72 T 11-11-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 SHALO_RS05045 0c5460030e29246441b565f94214bf90 546 PRINTS PR00298 60kDa chaperonin signature 349 374 8.9E-72 T 11-11-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 SHALO_RS05045 0c5460030e29246441b565f94214bf90 546 PRINTS PR00298 60kDa chaperonin signature 26 52 8.9E-72 T 11-11-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 SHALO_RS05045 0c5460030e29246441b565f94214bf90 546 PRINTS PR00298 60kDa chaperonin signature 397 418 8.9E-72 T 11-11-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 SHALO_RS05045 0c5460030e29246441b565f94214bf90 546 Gene3D G3DSA:1.10.560.10 3 187 8.1E-48 T 11-11-2016 IPR027413 GroEL-like equatorial domain SHALO_RS05045 0c5460030e29246441b565f94214bf90 546 TIGRFAM TIGR02348 GroEL: chaperonin GroL 2 525 1.1E-256 T 11-11-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 SHALO_RS05045 0c5460030e29246441b565f94214bf90 546 Hamap MF_00600 60 kDa chaperonin [groL]. 1 545 41.86 T 11-11-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 SHALO_RS05045 0c5460030e29246441b565f94214bf90 546 Gene3D G3DSA:3.50.7.10 188 365 2.8E-99 T 11-11-2016 IPR027409 GroEL-like apical domain SHALO_RS05045 0c5460030e29246441b565f94214bf90 546 Pfam PF00118 TCP-1/cpn60 chaperonin family 22 521 2.3E-101 T 11-11-2016 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 SHALO_RS11450 d4eec03a5b920d5f926dd48608c73ddc 272 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 103 116 - T 11-11-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 SHALO_RS11450 d4eec03a5b920d5f926dd48608c73ddc 272 Gene3D G3DSA:3.40.50.300 70 231 1.6E-29 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS11450 d4eec03a5b920d5f926dd48608c73ddc 272 Pfam PF01695 IstB-like ATP binding protein 55 232 2.1E-60 T 11-11-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 SHALO_RS11450 d4eec03a5b920d5f926dd48608c73ddc 272 PIRSF PIRSF003073 2 253 5.3E-81 T 11-11-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein SHALO_RS11450 d4eec03a5b920d5f926dd48608c73ddc 272 SMART SM00382 99 233 1.9E-8 T 11-11-2016 IPR003593 AAA+ ATPase domain SHALO_RS11450 d4eec03a5b920d5f926dd48608c73ddc 272 SUPERFAMILY SSF52540 66 231 5.34E-25 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS13795 cc337ce892d96b5e403cf06444466dd2 315 PIRSF PIRSF018266 1 314 1.1E-67 T 11-11-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component SHALO_RS13795 cc337ce892d96b5e403cf06444466dd2 315 Pfam PF16220 Domain of unknown function (DUF4880) 18 48 2.1E-8 T 11-11-2016 IPR032623 FecR, N-terminal SHALO_RS13795 cc337ce892d96b5e403cf06444466dd2 315 Pfam PF16344 Domain of unknown function (DUF4974) 212 307 8.0E-13 T 11-11-2016 IPR032508 Protein FecR, C-terminal SHALO_RS13795 cc337ce892d96b5e403cf06444466dd2 315 Pfam PF04773 FecR protein 111 199 5.9E-20 T 11-11-2016 IPR006860 FecR protein SHALO_RS00225 f1c2c0164b2f3b5b5e3e628d04249835 330 SUPERFAMILY SSF102114 46 307 4.84E-30 T 11-11-2016 SHALO_RS00225 f1c2c0164b2f3b5b5e3e628d04249835 330 Pfam PF04055 Radical SAM superfamily 76 222 2.7E-20 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SHALO_RS00225 f1c2c0164b2f3b5b5e3e628d04249835 330 PIRSF PIRSF004869 2 304 4.5E-92 T 11-11-2016 IPR016431 Pyruvate-formate lyase-activating enzyme, predicted SHALO_RS00225 f1c2c0164b2f3b5b5e3e628d04249835 330 TIGRFAM TIGR04337 AmmeMemoSam_rS: AmmeMemoRadiSam system radical SAM enzyme 5 329 2.6E-107 T 11-11-2016 IPR027596 AmmeMemoRadiSam system radical SAM enzyme SHALO_RS00225 f1c2c0164b2f3b5b5e3e628d04249835 330 Gene3D G3DSA:3.80.30.10 116 280 3.3E-33 T 11-11-2016 SHALO_RS07475 3dc75e782d46cb71a43489ee116bbfcf 210 Gene3D G3DSA:1.10.3210.10 34 200 1.8E-21 T 11-11-2016 IPR006674 HD domain SHALO_RS07475 3dc75e782d46cb71a43489ee116bbfcf 210 TIGRFAM TIGR00277 HDIG: HDIG domain 38 125 2.3E-7 T 11-11-2016 IPR006675 HDIG domain SHALO_RS07475 3dc75e782d46cb71a43489ee116bbfcf 210 SUPERFAMILY SSF109604 25 195 2.46E-36 T 11-11-2016 SHALO_RS07475 3dc75e782d46cb71a43489ee116bbfcf 210 Pfam PF13487 HD domain 88 148 1.1E-20 T 11-11-2016 SHALO_RS07475 3dc75e782d46cb71a43489ee116bbfcf 210 SMART SM00471 31 166 8.5E-9 T 11-11-2016 IPR003607 HD/PDEase domain SHALO_RS11550 006dbdacd92e2203ebffa84e8e72402b 481 SUPERFAMILY SSF56059 86 351 7.78E-67 T 11-11-2016 SHALO_RS11550 006dbdacd92e2203ebffa84e8e72402b 481 Gene3D G3DSA:3.40.50.20 6 132 8.8E-46 T 11-11-2016 IPR016185 Pre-ATP-grasp domain SHALO_RS11550 006dbdacd92e2203ebffa84e8e72402b 481 SUPERFAMILY SSF52440 4 115 1.15E-42 T 11-11-2016 IPR016185 Pre-ATP-grasp domain SHALO_RS11550 006dbdacd92e2203ebffa84e8e72402b 481 SUPERFAMILY SSF51246 334 451 6.28E-41 T 11-11-2016 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780|Reactome: R-HSA-3371599 SHALO_RS11550 006dbdacd92e2203ebffa84e8e72402b 481 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 289 296 - T 11-11-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SHALO_RS11550 006dbdacd92e2203ebffa84e8e72402b 481 SMART SM00878 339 445 1.2E-55 T 11-11-2016 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 SHALO_RS11550 006dbdacd92e2203ebffa84e8e72402b 481 Gene3D G3DSA:3.30.1490.20 133 205 2.2E-25 T 11-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SHALO_RS11550 006dbdacd92e2203ebffa84e8e72402b 481 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 156 170 - T 11-11-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SHALO_RS11550 006dbdacd92e2203ebffa84e8e72402b 481 Pfam PF02785 Biotin carboxylase C-terminal domain 339 445 2.0E-36 T 11-11-2016 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 SHALO_RS11550 006dbdacd92e2203ebffa84e8e72402b 481 Pfam PF00289 Biotin carboxylase, N-terminal domain 6 113 4.9E-40 T 11-11-2016 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 SHALO_RS11550 006dbdacd92e2203ebffa84e8e72402b 481 Gene3D G3DSA:3.30.470.20 206 449 4.2E-96 T 11-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SHALO_RS11550 006dbdacd92e2203ebffa84e8e72402b 481 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 118 326 8.6E-79 T 11-11-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SHALO_RS04070 f5852fa045695992e7651c74772d055c 551 SUPERFAMILY SSF82693 52 152 1.52E-7 T 11-11-2016 SHALO_RS04070 f5852fa045695992e7651c74772d055c 551 SUPERFAMILY SSF82866 365 545 5.89E-34 T 11-11-2016 SHALO_RS04070 f5852fa045695992e7651c74772d055c 551 Gene3D G3DSA:3.30.70.1430 54 163 2.0E-7 T 11-11-2016 SHALO_RS04070 f5852fa045695992e7651c74772d055c 551 Gene3D G3DSA:1.10.3850.10 315 546 5.0E-49 T 11-11-2016 SHALO_RS04070 f5852fa045695992e7651c74772d055c 551 Pfam PF00873 AcrB/AcrD/AcrF family 16 544 1.3E-43 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SHALO_RS04070 f5852fa045695992e7651c74772d055c 551 Gene3D G3DSA:3.30.2090.10 215 307 9.0E-4 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SHALO_RS10515 7e6135b21f4a7db1ca5c63f3310a80d7 351 PIRSF PIRSF038991 3 351 2.3E-92 T 11-11-2016 IPR007820 AbrB family GO:0010468|GO:0016021 SHALO_RS10515 7e6135b21f4a7db1ca5c63f3310a80d7 351 Pfam PF05145 Putative ammonia monooxygenase 33 345 2.6E-85 T 11-11-2016 IPR007820 AbrB family GO:0010468|GO:0016021 SHALO_RS10515 7e6135b21f4a7db1ca5c63f3310a80d7 351 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 190 345 7.3E-30 T 11-11-2016 IPR017516 AbrB duplication SHALO_RS10515 7e6135b21f4a7db1ca5c63f3310a80d7 351 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 11 165 5.0E-36 T 11-11-2016 IPR017516 AbrB duplication SHALO_RS07385 10aaf746c211dfb864a67b49f480ae1d 441 SMART SM00382 48 330 1.0E-10 T 11-11-2016 IPR003593 AAA+ ATPase domain SHALO_RS07385 10aaf746c211dfb864a67b49f480ae1d 441 Gene3D G3DSA:1.10.8.60 332 441 7.8E-34 T 11-11-2016 SHALO_RS07385 10aaf746c211dfb864a67b49f480ae1d 441 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 333 403 5.8E-7 T 11-11-2016 IPR019489 Clp ATPase, C-terminal SHALO_RS07385 10aaf746c211dfb864a67b49f480ae1d 441 Pfam PF07724 AAA domain (Cdc48 subfamily) 51 114 1.4E-6 T 11-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SHALO_RS07385 10aaf746c211dfb864a67b49f480ae1d 441 Pfam PF07724 AAA domain (Cdc48 subfamily) 200 326 1.4E-37 T 11-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SHALO_RS07385 10aaf746c211dfb864a67b49f480ae1d 441 SMART SM01086 333 429 2.1E-21 T 11-11-2016 IPR019489 Clp ATPase, C-terminal SHALO_RS07385 10aaf746c211dfb864a67b49f480ae1d 441 Gene3D G3DSA:3.40.50.300 242 329 5.1E-46 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS07385 10aaf746c211dfb864a67b49f480ae1d 441 Gene3D G3DSA:3.40.50.300 3 109 5.1E-46 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS07385 10aaf746c211dfb864a67b49f480ae1d 441 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 3 441 4.3E-192 T 11-11-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 SHALO_RS07385 10aaf746c211dfb864a67b49f480ae1d 441 Gene3D G3DSA:1.10.8.10 110 175 5.7E-22 T 11-11-2016 SHALO_RS07385 10aaf746c211dfb864a67b49f480ae1d 441 Gene3D G3DSA:1.10.8.10 210 240 5.7E-22 T 11-11-2016 SHALO_RS07385 10aaf746c211dfb864a67b49f480ae1d 441 SUPERFAMILY SSF52540 2 438 2.86E-73 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS03405 1ecf59e427ce25d69b4f610e91b92b24 261 SUPERFAMILY SSF52540 1 259 6.88E-61 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS03405 1ecf59e427ce25d69b4f610e91b92b24 261 Gene3D G3DSA:3.40.50.300 4 259 1.7E-69 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS03405 1ecf59e427ce25d69b4f610e91b92b24 261 Pfam PF13614 AAA domain 3 180 1.0E-66 T 11-11-2016 IPR025669 AAA domain SHALO_RS05060 8405518361e078571f4bd6c0d5730974 402 Gene3D G3DSA:1.10.443.10 180 382 6.7E-24 T 11-11-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 SHALO_RS05060 8405518361e078571f4bd6c0d5730974 402 Gene3D G3DSA:1.10.150.130 92 172 5.5E-8 T 11-11-2016 IPR023109 Integrase/recombinase, N-terminal SHALO_RS05060 8405518361e078571f4bd6c0d5730974 402 Pfam PF00589 Phage integrase family 186 374 2.2E-12 T 11-11-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 SHALO_RS05060 8405518361e078571f4bd6c0d5730974 402 SUPERFAMILY SSF56349 91 379 3.24E-37 T 11-11-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 SHALO_RS14435 1dd9e271d4708c6aad35fd6ac1e4c94f 161 SUPERFAMILY SSF50022 43 146 9.17E-22 T 11-11-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 SHALO_RS14435 1dd9e271d4708c6aad35fd6ac1e4c94f 161 TIGRFAM TIGR02694 arsenite_ox_S: arsenite oxidase, small subunit 45 158 1.6E-32 T 11-11-2016 IPR014067 Arsenite oxidase, small subunit MetaCyc: PWY-7429 SHALO_RS14435 1dd9e271d4708c6aad35fd6ac1e4c94f 161 Pfam PF00355 Rieske [2Fe-2S] domain 76 132 6.1E-11 T 11-11-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 SHALO_RS14435 1dd9e271d4708c6aad35fd6ac1e4c94f 161 Gene3D G3DSA:2.102.10.10 6 154 1.0E-25 T 11-11-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 SHALO_RS06225 8fa3568d7e3825cd9d383e78cf2c6dca 167 Pfam PF01863 Protein of unknown function DUF45 95 149 3.5E-11 T 11-11-2016 IPR002725 Protein of unknown function DUF45 SHALO_RS13525 4f82a3aee64476fe5b611ebab68c04a2 614 PIRSF PIRSF000171 37 613 4.6E-39 T 11-11-2016 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_RS13525 4f82a3aee64476fe5b611ebab68c04a2 614 Gene3D G3DSA:1.20.58.100 467 568 4.9E-26 T 11-11-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_RS13525 4f82a3aee64476fe5b611ebab68c04a2 614 Pfam PF00890 FAD binding domain 48 431 1.3E-94 T 11-11-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_RS13525 4f82a3aee64476fe5b611ebab68c04a2 614 Pfam PF02910 Fumarate reductase flavoprotein C-term 488 614 3.7E-32 T 11-11-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_RS13525 4f82a3aee64476fe5b611ebab68c04a2 614 Gene3D G3DSA:4.10.80.40 569 610 4.0E-14 T 11-11-2016 SHALO_RS13525 4f82a3aee64476fe5b611ebab68c04a2 614 Gene3D G3DSA:3.50.50.60 36 276 4.7E-93 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHALO_RS13525 4f82a3aee64476fe5b611ebab68c04a2 614 Gene3D G3DSA:3.50.50.60 385 452 4.7E-93 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHALO_RS13525 4f82a3aee64476fe5b611ebab68c04a2 614 SUPERFAMILY SSF46977 484 614 3.92E-37 T 11-11-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_RS13525 4f82a3aee64476fe5b611ebab68c04a2 614 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 48 614 1.8E-200 T 11-11-2016 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_RS13525 4f82a3aee64476fe5b611ebab68c04a2 614 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 394 416 3.3E-5 T 11-11-2016 SHALO_RS13525 4f82a3aee64476fe5b611ebab68c04a2 614 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 49 68 3.3E-5 T 11-11-2016 SHALO_RS13525 4f82a3aee64476fe5b611ebab68c04a2 614 Gene3D G3DSA:3.90.700.10 277 383 2.9E-36 T 11-11-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_RS13525 4f82a3aee64476fe5b611ebab68c04a2 614 SUPERFAMILY SSF56425 270 389 4.19E-39 T 11-11-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_RS13525 4f82a3aee64476fe5b611ebab68c04a2 614 SUPERFAMILY SSF51905 41 293 4.2E-64 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHALO_RS13525 4f82a3aee64476fe5b611ebab68c04a2 614 SUPERFAMILY SSF51905 393 454 4.2E-64 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHALO_RS06770 81672fa065bd21a914804fadcf5d78e0 243 TIGRFAM TIGR03915 SAM_7_link_chp: probable DNA metabolism protein 3 241 4.4E-62 T 11-11-2016 IPR023875 DNA metabolism protein, putative SHALO_RS06770 81672fa065bd21a914804fadcf5d78e0 243 Pfam PF13566 Domain of unknown function (DUF4130 82 240 1.0E-37 T 11-11-2016 IPR025404 Domain of unknown function DUF4130 SHALO_RS14055 f0bf6d16ce5596617abd42ace4a724a4 222 SMART SM00448 2 113 3.4E-31 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS14055 f0bf6d16ce5596617abd42ace4a724a4 222 SMART SM00862 143 219 5.4E-16 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS14055 f0bf6d16ce5596617abd42ace4a724a4 222 SUPERFAMILY SSF46894 130 220 1.62E-20 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SHALO_RS14055 f0bf6d16ce5596617abd42ace4a724a4 222 Pfam PF00072 Response regulator receiver domain 4 110 9.5E-23 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS14055 f0bf6d16ce5596617abd42ace4a724a4 222 SUPERFAMILY SSF52172 1 127 1.17E-34 T 11-11-2016 IPR011006 CheY-like superfamily SHALO_RS14055 f0bf6d16ce5596617abd42ace4a724a4 222 Gene3D G3DSA:1.10.10.10 145 220 3.9E-23 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS14055 f0bf6d16ce5596617abd42ace4a724a4 222 Pfam PF00486 Transcriptional regulatory protein, C terminal 144 219 2.8E-17 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS14055 f0bf6d16ce5596617abd42ace4a724a4 222 Gene3D G3DSA:3.40.50.2300 1 144 4.4E-35 T 11-11-2016 SHALO_RS13910 fd92280c64bf0a562707abd204304185 329 Pfam PF01592 NifU-like N terminal domain 14 149 4.8E-45 T 11-11-2016 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 SHALO_RS13910 fd92280c64bf0a562707abd204304185 329 Gene3D G3DSA:3.90.1010.10 14 150 5.2E-35 T 11-11-2016 SHALO_RS13910 fd92280c64bf0a562707abd204304185 329 Pfam PF04324 BFD-like [2Fe-2S] binding domain 159 201 1.3E-11 T 11-11-2016 IPR007419 BFD-like [2Fe-2S]-binding domain SHALO_RS13910 fd92280c64bf0a562707abd204304185 329 Pfam PF01106 NifU-like domain 256 326 8.9E-21 T 11-11-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 SHALO_RS13910 fd92280c64bf0a562707abd204304185 329 PIRSF PIRSF000375 12 329 2.3E-107 T 11-11-2016 IPR016217 Nitrogen fixation, NifU SHALO_RS13910 fd92280c64bf0a562707abd204304185 329 SUPERFAMILY SSF82649 14 156 1.86E-35 T 11-11-2016 SHALO_RS13910 fd92280c64bf0a562707abd204304185 329 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 262 326 7.0E-14 T 11-11-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 SHALO_RS13910 fd92280c64bf0a562707abd204304185 329 SUPERFAMILY SSF117916 246 329 1.57E-19 T 11-11-2016 SHALO_RS02430 8c564b3f8a6b5df911ada79f69fbae70 124 Gene3D G3DSA:3.30.1390.10 52 124 6.4E-32 T 11-11-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like SHALO_RS02430 8c564b3f8a6b5df911ada79f69fbae70 124 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 58 124 2.1E-29 T 11-11-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS02430 8c564b3f8a6b5df911ada79f69fbae70 124 SUPERFAMILY SSF54736 53 124 5.06E-24 T 11-11-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like SHALO_RS02430 8c564b3f8a6b5df911ada79f69fbae70 124 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 124 2.3E-48 T 11-11-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS02430 8c564b3f8a6b5df911ada79f69fbae70 124 SUPERFAMILY SSF48300 4 60 1.57E-15 T 11-11-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS02430 8c564b3f8a6b5df911ada79f69fbae70 124 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 124 24.259 T 11-11-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS02430 8c564b3f8a6b5df911ada79f69fbae70 124 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 59 124 4.0E-18 T 11-11-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS02430 8c564b3f8a6b5df911ada79f69fbae70 124 Gene3D G3DSA:1.20.5.710 2 51 5.0E-20 T 11-11-2016 SHALO_RS02430 8c564b3f8a6b5df911ada79f69fbae70 124 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 5 50 2.7E-19 T 11-11-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS14670 8ae38ec153e14bfee1fa4a6560e2ffe7 336 Gene3D G3DSA:3.20.20.70 24 301 9.6E-36 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_RS14670 8ae38ec153e14bfee1fa4a6560e2ffe7 336 Pfam PF13186 Iron-sulfur cluster-binding domain 233 301 5.6E-13 T 11-11-2016 IPR023885 4Fe4S-binding SPASM domain SHALO_RS14670 8ae38ec153e14bfee1fa4a6560e2ffe7 336 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 233 301 5.5E-7 T 11-11-2016 IPR023885 4Fe4S-binding SPASM domain SHALO_RS14670 8ae38ec153e14bfee1fa4a6560e2ffe7 336 SUPERFAMILY SSF102114 23 301 7.32E-40 T 11-11-2016 SHALO_RS14670 8ae38ec153e14bfee1fa4a6560e2ffe7 336 Pfam PF04055 Radical SAM superfamily 29 165 2.8E-9 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SHALO_RS11830 23d593ed0c32432eebc6e39c4f82cb8d 223 Gene3D G3DSA:3.40.50.2300 2 124 7.8E-29 T 11-11-2016 SHALO_RS11830 23d593ed0c32432eebc6e39c4f82cb8d 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 222 6.8E-23 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS11830 23d593ed0c32432eebc6e39c4f82cb8d 223 SUPERFAMILY SSF52172 3 178 4.87E-32 T 11-11-2016 IPR011006 CheY-like superfamily SHALO_RS11830 23d593ed0c32432eebc6e39c4f82cb8d 223 Gene3D G3DSA:1.10.10.10 125 222 8.0E-31 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS11830 23d593ed0c32432eebc6e39c4f82cb8d 223 SMART SM00448 3 114 3.5E-27 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS11830 23d593ed0c32432eebc6e39c4f82cb8d 223 Pfam PF00072 Response regulator receiver domain 5 114 5.4E-22 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS11830 23d593ed0c32432eebc6e39c4f82cb8d 223 SMART SM00862 147 222 4.0E-21 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS05745 2b7b17f46171d1e23bd0f2d676e0743c 124 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 1 114 3.5E-22 T 11-11-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 SHALO_RS05745 2b7b17f46171d1e23bd0f2d676e0743c 124 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 1 115 17.766 T 11-11-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 SHALO_RS05745 2b7b17f46171d1e23bd0f2d676e0743c 124 SUPERFAMILY SSF56214 2 114 1.26E-21 T 11-11-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 SHALO_RS05745 2b7b17f46171d1e23bd0f2d676e0743c 124 Gene3D G3DSA:3.90.470.20 2 115 1.4E-24 T 11-11-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 SHALO_RS05745 2b7b17f46171d1e23bd0f2d676e0743c 124 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 5 114 8.0E-27 T 11-11-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 SHALO_RS05745 2b7b17f46171d1e23bd0f2d676e0743c 124 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 1 110 1.5E-13 T 11-11-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 SHALO_RS05745 2b7b17f46171d1e23bd0f2d676e0743c 124 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 1 115 2.7E-32 T 11-11-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 SHALO_RS13090 f32305e21aad78f97bd1967f30b0a0f1 256 SUPERFAMILY SSF161098 54 243 1.07E-45 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHALO_RS13090 f32305e21aad78f97bd1967f30b0a0f1 256 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 74 255 1.8E-26 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHALO_RS13090 f32305e21aad78f97bd1967f30b0a0f1 256 Gene3D G3DSA:1.10.3720.10 51 255 6.8E-53 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHALO_RS13090 f32305e21aad78f97bd1967f30b0a0f1 256 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 53 149 3.2E-21 T 11-11-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 SHALO_RS01940 2bfd46391ac1b4edae2544388ffb780b 352 PRINTS PR00955 Flagellar motor switch protein FliM signature 211 229 1.9E-29 T 11-11-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 SHALO_RS01940 2bfd46391ac1b4edae2544388ffb780b 352 PRINTS PR00955 Flagellar motor switch protein FliM signature 115 134 1.9E-29 T 11-11-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 SHALO_RS01940 2bfd46391ac1b4edae2544388ffb780b 352 PRINTS PR00955 Flagellar motor switch protein FliM signature 2 15 1.9E-29 T 11-11-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 SHALO_RS01940 2bfd46391ac1b4edae2544388ffb780b 352 PRINTS PR00955 Flagellar motor switch protein FliM signature 90 106 1.9E-29 T 11-11-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 SHALO_RS01940 2bfd46391ac1b4edae2544388ffb780b 352 Gene3D G3DSA:2.30.330.10 241 326 4.4E-11 T 11-11-2016 SHALO_RS01940 2bfd46391ac1b4edae2544388ffb780b 352 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 253 322 6.0E-15 T 11-11-2016 IPR001543 Surface presentation of antigen (SpoA) SHALO_RS01940 2bfd46391ac1b4edae2544388ffb780b 352 SUPERFAMILY SSF103039 45 229 4.45E-27 T 11-11-2016 IPR028976 CheC-like domain SHALO_RS01940 2bfd46391ac1b4edae2544388ffb780b 352 PIRSF PIRSF002888 1 332 4.4E-109 T 11-11-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 SHALO_RS01940 2bfd46391ac1b4edae2544388ffb780b 352 SUPERFAMILY SSF101801 249 327 1.2E-13 T 11-11-2016 IPR001543 Surface presentation of antigen (SpoA) SHALO_RS01940 2bfd46391ac1b4edae2544388ffb780b 352 Pfam PF02154 Flagellar motor switch protein FliM 39 229 3.9E-76 T 11-11-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 SHALO_RS01940 2bfd46391ac1b4edae2544388ffb780b 352 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 3 321 2.5E-103 T 11-11-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 SHALO_RS01940 2bfd46391ac1b4edae2544388ffb780b 352 Gene3D G3DSA:3.40.1550.10 46 211 1.4E-4 T 11-11-2016 IPR028976 CheC-like domain SHALO_RS10530 3c572ee98b20dafd7be91a8d693f01aa 228 Pfam PF00072 Response regulator receiver domain 4 108 8.5E-21 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS10530 3c572ee98b20dafd7be91a8d693f01aa 228 SUPERFAMILY SSF52172 1 131 2.13E-29 T 11-11-2016 IPR011006 CheY-like superfamily SHALO_RS10530 3c572ee98b20dafd7be91a8d693f01aa 228 Gene3D G3DSA:1.10.10.10 162 202 7.7E-6 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS10530 3c572ee98b20dafd7be91a8d693f01aa 228 PIRSF PIRSF006171 1 228 6.6E-80 T 11-11-2016 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0001071|GO:0003677|GO:0005737|GO:0009605 SHALO_RS10530 3c572ee98b20dafd7be91a8d693f01aa 228 SMART SM00448 2 115 7.2E-21 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS10530 3c572ee98b20dafd7be91a8d693f01aa 228 Gene3D G3DSA:3.40.50.2300 1 125 1.1E-24 T 11-11-2016 SHALO_RS10530 3c572ee98b20dafd7be91a8d693f01aa 228 Pfam PF08279 HTH domain 163 201 3.3E-5 T 11-11-2016 IPR013196 Helix-turn-helix, type 11 SHALO_RS10530 3c572ee98b20dafd7be91a8d693f01aa 228 SUPERFAMILY SSF46785 163 207 5.01E-6 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS13595 03aedf565bd85f04a4d544833b008a87 356 PIRSF PIRSF005739 2 355 1.5E-5 T 11-11-2016 IPR016461 O-methyltransferase COMT-type GO:0008168 SHALO_RS13595 03aedf565bd85f04a4d544833b008a87 356 Gene3D G3DSA:1.10.10.10 41 105 3.7E-4 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS13595 03aedf565bd85f04a4d544833b008a87 356 SUPERFAMILY SSF46785 20 100 4.54E-8 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS13595 03aedf565bd85f04a4d544833b008a87 356 SUPERFAMILY SSF53335 100 347 2.13E-34 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS13595 03aedf565bd85f04a4d544833b008a87 356 Pfam PF00891 O-methyltransferase 182 336 4.2E-8 T 11-11-2016 IPR001077 O-methyltransferase, family 2 GO:0008171 SHALO_RS13595 03aedf565bd85f04a4d544833b008a87 356 Gene3D G3DSA:3.40.50.150 106 353 3.6E-30 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS04075 aaaf33006e627e1e936f1edaf82cb0df 82 Gene3D G3DSA:1.10.260.40 21 50 1.6E-5 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SHALO_RS06870 adc17370228bcdd82f3683c78cebb3df 191 Gene3D G3DSA:3.40.50.150 7 190 1.2E-46 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS06870 adc17370228bcdd82f3683c78cebb3df 191 SUPERFAMILY SSF53335 10 190 3.5E-28 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS06870 adc17370228bcdd82f3683c78cebb3df 191 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 9 190 1.0E-39 T 11-11-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SHALO_RS06870 adc17370228bcdd82f3683c78cebb3df 191 Pfam PF03602 Conserved hypothetical protein 95 10 190 1.7E-37 T 11-11-2016 SHALO_RS06870 adc17370228bcdd82f3683c78cebb3df 191 PIRSF PIRSF004553 7 191 8.0E-37 T 11-11-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SHALO_RS00655 5c06d48e9753a331c981c3212490deff 455 Pfam PF12801 4Fe-4S binding domain 67 109 1.8E-13 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_RS00655 5c06d48e9753a331c981c3212490deff 455 SUPERFAMILY SSF54862 156 319 1.67E-21 T 11-11-2016 SHALO_RS00655 5c06d48e9753a331c981c3212490deff 455 SUPERFAMILY SSF54862 78 100 1.67E-21 T 11-11-2016 SHALO_RS00655 5c06d48e9753a331c981c3212490deff 455 Gene3D G3DSA:3.30.70.20 253 281 6.4E-4 T 11-11-2016 SHALO_RS00655 5c06d48e9753a331c981c3212490deff 455 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 246 257 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_RS00655 5c06d48e9753a331c981c3212490deff 455 Pfam PF13746 4Fe-4S dicluster domain 191 297 1.2E-42 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_RS00655 5c06d48e9753a331c981c3212490deff 455 Gene3D G3DSA:2.60.40.10 333 448 3.1E-10 T 11-11-2016 IPR013783 Immunoglobulin-like fold SHALO_RS00655 5c06d48e9753a331c981c3212490deff 455 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 329 448 5.1E-22 T 11-11-2016 IPR032879 FixG, C-terminal immunoglobulin-like domain SHALO_RS00655 5c06d48e9753a331c981c3212490deff 455 Gene3D G3DSA:3.30.70.20 194 252 1.6E-7 T 11-11-2016 SHALO_RS00655 5c06d48e9753a331c981c3212490deff 455 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 14 448 2.1E-148 T 11-11-2016 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021 SHALO_RS11445 145c5e61deb2b079f6d0ab43d9347222 431 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 17 431 9.8E-100 T 11-11-2016 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase SHALO_RS11445 145c5e61deb2b079f6d0ab43d9347222 431 Pfam PF02397 Bacterial sugar transferase 234 425 7.3E-58 T 11-11-2016 IPR003362 Bacterial sugar transferase SHALO_RS02075 442ba10f9dac3fc79190e102c721b23a 734 Gene3D G3DSA:3.30.565.10 31 183 1.4E-25 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS02075 442ba10f9dac3fc79190e102c721b23a 734 PRINTS PR00344 Bacterial sensor protein C-terminal signature 644 658 1.1E-8 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS02075 442ba10f9dac3fc79190e102c721b23a 734 PRINTS PR00344 Bacterial sensor protein C-terminal signature 710 723 1.1E-8 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS02075 442ba10f9dac3fc79190e102c721b23a 734 PRINTS PR00344 Bacterial sensor protein C-terminal signature 685 703 1.1E-8 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS02075 442ba10f9dac3fc79190e102c721b23a 734 Gene3D G3DSA:3.30.565.10 555 727 7.8E-26 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS02075 442ba10f9dac3fc79190e102c721b23a 734 SUPERFAMILY SSF55874 16 195 5.02E-25 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS02075 442ba10f9dac3fc79190e102c721b23a 734 SMART SM00387 604 726 1.7E-18 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS02075 442ba10f9dac3fc79190e102c721b23a 734 SUPERFAMILY SSF55874 557 727 1.19E-24 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS02075 442ba10f9dac3fc79190e102c721b23a 734 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 611 725 9.1E-13 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS02075 442ba10f9dac3fc79190e102c721b23a 734 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 36 171 1.7E-23 T 11-11-2016 SHALO_RS03425 71b8cb6a5f070a77454f14e189894d9e 176 Hamap MF_01416 ATP synthase subunit delta [atpD]. 1 174 12.325 T 11-11-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 SHALO_RS03425 71b8cb6a5f070a77454f14e189894d9e 176 Pfam PF00213 ATP synthase delta (OSCP) subunit 5 166 5.6E-21 T 11-11-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 SHALO_RS03425 71b8cb6a5f070a77454f14e189894d9e 176 SUPERFAMILY SSF47928 4 101 8.11E-14 T 11-11-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain Reactome: R-HSA-163210 SHALO_RS03425 71b8cb6a5f070a77454f14e189894d9e 176 Gene3D G3DSA:1.10.520.20 5 94 1.6E-13 T 11-11-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain Reactome: R-HSA-163210 SHALO_RS08805 905c08f827811d9c6bed92817ea1fbac 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 42 1.0E-13 T 11-11-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS08805 905c08f827811d9c6bed92817ea1fbac 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 11-11-2016 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_RS08805 905c08f827811d9c6bed92817ea1fbac 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 44 4.0E-24 T 11-11-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS08805 905c08f827811d9c6bed92817ea1fbac 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 15.139 T 11-11-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS08805 905c08f827811d9c6bed92817ea1fbac 44 Pfam PF00468 Ribosomal protein L34 1 44 7.3E-22 T 11-11-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS14175 f80982e6758c095ea0b0ce5435bb69a8 388 SUPERFAMILY SSF81301 6 203 1.29E-36 T 11-11-2016 SHALO_RS14175 f80982e6758c095ea0b0ce5435bb69a8 388 Gene3D G3DSA:1.10.287.860 155 206 3.7E-15 T 11-11-2016 SHALO_RS14175 f80982e6758c095ea0b0ce5435bb69a8 388 Gene3D G3DSA:3.30.460.10 15 152 6.9E-22 T 11-11-2016 SHALO_RS14175 f80982e6758c095ea0b0ce5435bb69a8 388 SMART SM00954 46 172 4.9E-23 T 11-11-2016 IPR007685 RelA/SpoT GO:0015969 SHALO_RS14175 f80982e6758c095ea0b0ce5435bb69a8 388 Pfam PF04607 Region found in RelA / SpoT proteins 47 169 5.0E-25 T 11-11-2016 IPR007685 RelA/SpoT GO:0015969 SHALO_RS09435 900be5ffa2c3af135fb945ecc63dce33 231 Gene3D G3DSA:3.30.1600.10 108 150 1.0E-19 T 11-11-2016 IPR026591 Sirtuin family, catalytic core small domain SHALO_RS09435 900be5ffa2c3af135fb945ecc63dce33 231 Gene3D G3DSA:3.30.1600.10 19 57 1.0E-19 T 11-11-2016 IPR026591 Sirtuin family, catalytic core small domain SHALO_RS09435 900be5ffa2c3af135fb945ecc63dce33 231 SUPERFAMILY SSF52467 3 222 1.45E-57 T 11-11-2016 IPR029035 DHS-like NAD/FAD-binding domain SHALO_RS09435 900be5ffa2c3af135fb945ecc63dce33 231 Pfam PF02146 Sir2 family 9 178 1.3E-44 T 11-11-2016 IPR003000 Sirtuin family GO:0070403 SHALO_RS09435 900be5ffa2c3af135fb945ecc63dce33 231 Gene3D G3DSA:3.40.50.1220 65 107 1.3E-28 T 11-11-2016 IPR029035 DHS-like NAD/FAD-binding domain SHALO_RS09435 900be5ffa2c3af135fb945ecc63dce33 231 Gene3D G3DSA:3.40.50.1220 3 17 1.3E-28 T 11-11-2016 IPR029035 DHS-like NAD/FAD-binding domain SHALO_RS09435 900be5ffa2c3af135fb945ecc63dce33 231 Gene3D G3DSA:3.40.50.1220 158 222 1.3E-28 T 11-11-2016 IPR029035 DHS-like NAD/FAD-binding domain SHALO_RS14460 f8395e93356b9443abdba2a0dd2c3c5b 228 SUPERFAMILY SSF52540 1 225 1.3E-71 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS14460 f8395e93356b9443abdba2a0dd2c3c5b 228 Gene3D G3DSA:3.40.50.300 1 225 4.4E-72 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS14460 f8395e93356b9443abdba2a0dd2c3c5b 228 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHALO_RS14460 f8395e93356b9443abdba2a0dd2c3c5b 228 SMART SM00382 30 219 1.7E-14 T 11-11-2016 IPR003593 AAA+ ATPase domain SHALO_RS14460 f8395e93356b9443abdba2a0dd2c3c5b 228 Pfam PF00005 ABC transporter 22 171 1.2E-33 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_RS08145 c8614c2bb49a082505e0dc6ced56b525 175 Pfam PF02441 Flavoprotein 2 115 1.4E-24 T 11-11-2016 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 SHALO_RS08145 c8614c2bb49a082505e0dc6ced56b525 175 Gene3D G3DSA:3.40.50.1950 2 174 7.7E-67 T 11-11-2016 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 SHALO_RS08145 c8614c2bb49a082505e0dc6ced56b525 175 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 3 172 4.5E-49 T 11-11-2016 IPR004507 Flavin prenyltransferase UbiX/Pad1 SHALO_RS08145 c8614c2bb49a082505e0dc6ced56b525 175 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 2 174 30.954 T 11-11-2016 IPR004507 Flavin prenyltransferase UbiX/Pad1 SHALO_RS08145 c8614c2bb49a082505e0dc6ced56b525 175 SUPERFAMILY SSF52507 2 174 5.36E-53 T 11-11-2016 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 SHALO_RS01365 9dc7ae6d96c69ccf444180cc2c87d71d 94 Gene3D G3DSA:3.30.70.20 5 69 2.6E-14 T 11-11-2016 SHALO_RS01365 9dc7ae6d96c69ccf444180cc2c87d71d 94 Pfam PF12838 4Fe-4S dicluster domain 9 62 3.5E-7 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_RS01365 9dc7ae6d96c69ccf444180cc2c87d71d 94 SUPERFAMILY SSF54862 5 69 2.79E-15 T 11-11-2016 SHALO_RS01365 9dc7ae6d96c69ccf444180cc2c87d71d 94 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_RS07090 a3d8c42b100c5b0899c71a5d5b311d4c 396 Pfam PF13520 Amino acid permease 5 379 3.7E-21 T 11-11-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SHALO_RS07090 a3d8c42b100c5b0899c71a5d5b311d4c 396 PIRSF PIRSF006060 1 395 7.6E-31 T 11-11-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SHALO_RS15030 8c2547dfb64f584f1454ade709f9ace3 221 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 91 102 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_RS15030 8c2547dfb64f584f1454ade709f9ace3 221 Pfam PF13247 4Fe-4S dicluster domain 54 147 3.9E-20 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_RS15030 8c2547dfb64f584f1454ade709f9ace3 221 Gene3D G3DSA:3.30.70.20 66 98 4.5E-13 T 11-11-2016 SHALO_RS15030 8c2547dfb64f584f1454ade709f9ace3 221 Gene3D G3DSA:3.30.70.20 130 184 1.3E-15 T 11-11-2016 SHALO_RS15030 8c2547dfb64f584f1454ade709f9ace3 221 Gene3D G3DSA:3.30.70.20 2 65 1.0E-11 T 11-11-2016 SHALO_RS15030 8c2547dfb64f584f1454ade709f9ace3 221 Gene3D G3DSA:3.30.70.20 99 129 2.8E-9 T 11-11-2016 SHALO_RS15030 8c2547dfb64f584f1454ade709f9ace3 221 SUPERFAMILY SSF54862 1 187 9.52E-55 T 11-11-2016 SHALO_RS04090 22ebb46b1aa2e579f248a701009407e1 536 SUPERFAMILY SSF58104 225 535 6.1E-55 T 11-11-2016 SHALO_RS04090 22ebb46b1aa2e579f248a701009407e1 536 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 337 533 1.9E-38 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SHALO_RS04090 22ebb46b1aa2e579f248a701009407e1 536 Gene3D G3DSA:1.10.287.950 290 503 5.2E-42 T 11-11-2016 SHALO_RS04090 22ebb46b1aa2e579f248a701009407e1 536 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 399 428 3.2E-19 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SHALO_RS04090 22ebb46b1aa2e579f248a701009407e1 536 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 370 397 3.2E-19 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SHALO_RS04090 22ebb46b1aa2e579f248a701009407e1 536 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 183 203 3.2E-19 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SHALO_RS04090 22ebb46b1aa2e579f248a701009407e1 536 SMART SM00283 265 534 1.2E-40 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SHALO_RS04090 22ebb46b1aa2e579f248a701009407e1 536 Pfam PF00672 HAMP domain 186 249 2.2E-6 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SHALO_RS03650 bab5329e08153e08016a7cc51a7c5682 885 SUPERFAMILY SSF53098 302 482 1.46E-38 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SHALO_RS03650 bab5329e08153e08016a7cc51a7c5682 885 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 4 166 5.8E-44 T 11-11-2016 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 SHALO_RS03650 bab5329e08153e08016a7cc51a7c5682 885 Gene3D G3DSA:1.20.1060.10 506 625 1.2E-38 T 11-11-2016 SHALO_RS03650 bab5329e08153e08016a7cc51a7c5682 885 SMART SM00474 295 482 2.1E-29 T 11-11-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 SHALO_RS03650 bab5329e08153e08016a7cc51a7c5682 885 Pfam PF00476 DNA polymerase family A 515 883 7.2E-134 T 11-11-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHALO_RS03650 bab5329e08153e08016a7cc51a7c5682 885 TIGRFAM TIGR00593 pola: DNA polymerase I 4 885 5.7E-270 T 11-11-2016 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHALO_RS03650 bab5329e08153e08016a7cc51a7c5682 885 Pfam PF01612 3'-5' exonuclease 310 482 5.7E-32 T 11-11-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 SHALO_RS03650 bab5329e08153e08016a7cc51a7c5682 885 PRINTS PR00868 DNA-polymerase family A (pol I) signature 641 656 2.6E-67 T 11-11-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHALO_RS03650 bab5329e08153e08016a7cc51a7c5682 885 PRINTS PR00868 DNA-polymerase family A (pol I) signature 618 640 2.6E-67 T 11-11-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHALO_RS03650 bab5329e08153e08016a7cc51a7c5682 885 PRINTS PR00868 DNA-polymerase family A (pol I) signature 714 739 2.6E-67 T 11-11-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHALO_RS03650 bab5329e08153e08016a7cc51a7c5682 885 PRINTS PR00868 DNA-polymerase family A (pol I) signature 773 784 2.6E-67 T 11-11-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHALO_RS03650 bab5329e08153e08016a7cc51a7c5682 885 PRINTS PR00868 DNA-polymerase family A (pol I) signature 663 686 2.6E-67 T 11-11-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHALO_RS03650 bab5329e08153e08016a7cc51a7c5682 885 PRINTS PR00868 DNA-polymerase family A (pol I) signature 693 706 2.6E-67 T 11-11-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHALO_RS03650 bab5329e08153e08016a7cc51a7c5682 885 PRINTS PR00868 DNA-polymerase family A (pol I) signature 804 820 2.6E-67 T 11-11-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHALO_RS03650 bab5329e08153e08016a7cc51a7c5682 885 PRINTS PR00868 DNA-polymerase family A (pol I) signature 751 762 2.6E-67 T 11-11-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHALO_RS03650 bab5329e08153e08016a7cc51a7c5682 885 PRINTS PR00868 DNA-polymerase family A (pol I) signature 832 845 2.6E-67 T 11-11-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHALO_RS03650 bab5329e08153e08016a7cc51a7c5682 885 SMART SM00279 169 204 1.2E-11 T 11-11-2016 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 SHALO_RS03650 bab5329e08153e08016a7cc51a7c5682 885 SUPERFAMILY SSF56672 483 885 8.45E-133 T 11-11-2016 SHALO_RS03650 bab5329e08153e08016a7cc51a7c5682 885 ProSitePatterns PS00447 DNA polymerase family A signature. 714 733 - T 11-11-2016 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHALO_RS03650 bab5329e08153e08016a7cc51a7c5682 885 SUPERFAMILY SSF88723 2 166 5.89E-47 T 11-11-2016 IPR029060 PIN domain-like SHALO_RS03650 bab5329e08153e08016a7cc51a7c5682 885 SUPERFAMILY SSF47807 166 257 7.48E-25 T 11-11-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 SHALO_RS03650 bab5329e08153e08016a7cc51a7c5682 885 SMART SM00475 1 258 3.4E-100 T 11-11-2016 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 SHALO_RS03650 bab5329e08153e08016a7cc51a7c5682 885 Gene3D G3DSA:1.10.150.20 675 778 7.2E-35 T 11-11-2016 SHALO_RS03650 bab5329e08153e08016a7cc51a7c5682 885 Gene3D G3DSA:3.30.420.10 303 505 3.8E-57 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SHALO_RS03650 bab5329e08153e08016a7cc51a7c5682 885 Gene3D G3DSA:3.40.50.1010 2 164 3.7E-52 T 11-11-2016 IPR029060 PIN domain-like SHALO_RS03650 bab5329e08153e08016a7cc51a7c5682 885 Gene3D G3DSA:1.10.150.20 165 240 1.9E-27 T 11-11-2016 SHALO_RS03650 bab5329e08153e08016a7cc51a7c5682 885 Gene3D G3DSA:3.30.70.370 779 885 1.2E-59 T 11-11-2016 SHALO_RS03650 bab5329e08153e08016a7cc51a7c5682 885 Gene3D G3DSA:3.30.70.370 626 674 1.2E-59 T 11-11-2016 SHALO_RS03650 bab5329e08153e08016a7cc51a7c5682 885 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 167 257 1.6E-25 T 11-11-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 SHALO_RS03650 bab5329e08153e08016a7cc51a7c5682 885 SMART SM00482 649 849 2.6E-82 T 11-11-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHALO_RS05450 19fdcbe3813c29caa0132c4ab943895b 301 Pfam PF00892 EamA-like transporter family 155 288 3.8E-23 T 11-11-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SHALO_RS05450 19fdcbe3813c29caa0132c4ab943895b 301 Pfam PF00892 EamA-like transporter family 9 141 8.0E-23 T 11-11-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SHALO_RS05450 19fdcbe3813c29caa0132c4ab943895b 301 SUPERFAMILY SSF103481 44 144 3.53E-15 T 11-11-2016 SHALO_RS05450 19fdcbe3813c29caa0132c4ab943895b 301 SUPERFAMILY SSF103481 192 294 2.35E-16 T 11-11-2016 SHALO_RS00060 4615e4fbdc6756ef88c197059453a7d9 335 SUPERFAMILY SSF53850 27 331 4.61E-73 T 11-11-2016 SHALO_RS00060 4615e4fbdc6756ef88c197059453a7d9 335 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 39 317 1.1E-43 T 11-11-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 SHALO_RS00060 4615e4fbdc6756ef88c197059453a7d9 335 Gene3D G3DSA:3.40.190.10 26 119 2.0E-37 T 11-11-2016 SHALO_RS00060 4615e4fbdc6756ef88c197059453a7d9 335 Gene3D G3DSA:3.40.190.10 268 334 2.0E-37 T 11-11-2016 SHALO_RS00060 4615e4fbdc6756ef88c197059453a7d9 335 Gene3D G3DSA:3.40.190.100 121 267 2.5E-48 T 11-11-2016 SHALO_RS10140 e5f45010998760a3b4ca46b108763321 197 Pfam PF01063 Amino-transferase class IV 106 193 1.3E-11 T 11-11-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 SHALO_RS10140 e5f45010998760a3b4ca46b108763321 197 Gene3D G3DSA:3.20.10.10 90 187 3.5E-22 T 11-11-2016 SHALO_RS10140 e5f45010998760a3b4ca46b108763321 197 SUPERFAMILY SSF56752 10 190 2.49E-21 T 11-11-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 SHALO_RS10140 e5f45010998760a3b4ca46b108763321 197 Gene3D G3DSA:3.30.470.10 10 81 8.0E-20 T 11-11-2016 SHALO_RS03510 39fb01e252a5156a2eb8ff932d0aed19 1474 Pfam PF01493 GXGXG motif 1236 1418 1.4E-74 T 11-11-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 SHALO_RS03510 39fb01e252a5156a2eb8ff932d0aed19 1474 SUPERFAMILY SSF69336 1213 1466 4.05E-84 T 11-11-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 SHALO_RS03510 39fb01e252a5156a2eb8ff932d0aed19 1474 Gene3D G3DSA:2.160.20.60 1215 1467 6.6E-89 T 11-11-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 SHALO_RS03510 39fb01e252a5156a2eb8ff932d0aed19 1474 SUPERFAMILY SSF56235 11 424 7.14E-132 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SHALO_RS03510 39fb01e252a5156a2eb8ff932d0aed19 1474 Gene3D G3DSA:3.20.20.70 436 775 3.3E-76 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_RS03510 39fb01e252a5156a2eb8ff932d0aed19 1474 Pfam PF00310 Glutamine amidotransferases class-II 11 421 2.6E-151 T 11-11-2016 IPR017932 Glutamine amidotransferase type 2 domain SHALO_RS03510 39fb01e252a5156a2eb8ff932d0aed19 1474 SUPERFAMILY SSF51395 445 1184 2.75E-226 T 11-11-2016 SHALO_RS03510 39fb01e252a5156a2eb8ff932d0aed19 1474 Pfam PF01645 Conserved region in glutamate synthase 799 1160 3.3E-146 T 11-11-2016 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 SHALO_RS03510 39fb01e252a5156a2eb8ff932d0aed19 1474 Gene3D G3DSA:3.60.20.10 11 431 6.5E-152 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SHALO_RS03510 39fb01e252a5156a2eb8ff932d0aed19 1474 Pfam PF04898 Glutamate synthase central domain 452 736 1.6E-89 T 11-11-2016 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 SHALO_RS03510 39fb01e252a5156a2eb8ff932d0aed19 1474 Gene3D G3DSA:3.20.20.70 818 1188 1.4E-157 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_RS14880 d4ebd3fde73317471e87f8311c2824d2 376 Pfam PF05573 NosL 234 371 3.2E-31 T 11-11-2016 IPR008719 Nitrous oxide reductase accessory protein NosL SHALO_RS14880 d4ebd3fde73317471e87f8311c2824d2 376 Pfam PF05573 NosL 36 147 4.8E-21 T 11-11-2016 IPR008719 Nitrous oxide reductase accessory protein NosL SHALO_RS14880 d4ebd3fde73317471e87f8311c2824d2 376 SUPERFAMILY SSF160387 273 373 4.71E-24 T 11-11-2016 SHALO_RS14880 d4ebd3fde73317471e87f8311c2824d2 376 SUPERFAMILY SSF160387 60 160 1.39E-29 T 11-11-2016 SHALO_RS14375 835805c1af3678963bf4e0359c7ccb16 223 SUPERFAMILY SSF52172 1 175 5.71E-40 T 11-11-2016 IPR011006 CheY-like superfamily SHALO_RS14375 835805c1af3678963bf4e0359c7ccb16 223 Gene3D G3DSA:3.40.50.2300 1 120 1.1E-39 T 11-11-2016 SHALO_RS14375 835805c1af3678963bf4e0359c7ccb16 223 Pfam PF00072 Response regulator receiver domain 4 113 1.8E-29 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS14375 835805c1af3678963bf4e0359c7ccb16 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 220 5.2E-22 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS14375 835805c1af3678963bf4e0359c7ccb16 223 SMART SM00862 145 220 1.5E-21 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS14375 835805c1af3678963bf4e0359c7ccb16 223 SMART SM00448 1 112 7.9E-41 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS14375 835805c1af3678963bf4e0359c7ccb16 223 Gene3D G3DSA:1.10.10.10 125 221 1.8E-28 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS10670 217d383d10c896650f38aac58b6c8e16 531 Pfam PF00005 ABC transporter 337 468 3.7E-24 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_RS10670 217d383d10c896650f38aac58b6c8e16 531 Pfam PF00005 ABC transporter 18 186 9.0E-23 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_RS10670 217d383d10c896650f38aac58b6c8e16 531 Gene3D G3DSA:3.40.50.300 2 101 7.0E-48 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS10670 217d383d10c896650f38aac58b6c8e16 531 Gene3D G3DSA:3.40.50.300 134 283 7.0E-48 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS10670 217d383d10c896650f38aac58b6c8e16 531 Pfam PF12848 ABC transporter 226 309 1.4E-18 T 11-11-2016 IPR032781 ABC-transporter extension domain SHALO_RS10670 217d383d10c896650f38aac58b6c8e16 531 SUPERFAMILY SSF52540 302 523 7.69E-45 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS10670 217d383d10c896650f38aac58b6c8e16 531 SUPERFAMILY SSF52540 2 87 1.08E-41 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS10670 217d383d10c896650f38aac58b6c8e16 531 SUPERFAMILY SSF52540 127 241 1.08E-41 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS10670 217d383d10c896650f38aac58b6c8e16 531 Gene3D G3DSA:3.40.50.300 319 527 3.2E-39 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS10670 217d383d10c896650f38aac58b6c8e16 531 SMART SM00382 346 512 3.0E-13 T 11-11-2016 IPR003593 AAA+ ATPase domain SHALO_RS10670 217d383d10c896650f38aac58b6c8e16 531 SMART SM00382 26 231 3.7E-12 T 11-11-2016 IPR003593 AAA+ ATPase domain SHALO_RS04010 bacdd7817c8b7d9d0a7a2125825d6f9d 461 Gene3D G3DSA:1.10.275.10 3 107 5.2E-41 T 11-11-2016 IPR024083 Fumarase/histidase, N-terminal SHALO_RS04010 bacdd7817c8b7d9d0a7a2125825d6f9d 461 Pfam PF00206 Lyase 7 301 1.1E-77 T 11-11-2016 IPR022761 Fumarate lyase, N-terminal SHALO_RS04010 bacdd7817c8b7d9d0a7a2125825d6f9d 461 PRINTS PR00149 Fumarate lyase superfamily signature 276 292 7.3E-26 T 11-11-2016 IPR000362 Fumarate lyase family SHALO_RS04010 bacdd7817c8b7d9d0a7a2125825d6f9d 461 PRINTS PR00149 Fumarate lyase superfamily signature 232 259 7.3E-26 T 11-11-2016 IPR000362 Fumarate lyase family SHALO_RS04010 bacdd7817c8b7d9d0a7a2125825d6f9d 461 PRINTS PR00149 Fumarate lyase superfamily signature 103 121 7.3E-26 T 11-11-2016 IPR000362 Fumarate lyase family SHALO_RS04010 bacdd7817c8b7d9d0a7a2125825d6f9d 461 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 7.3E-26 T 11-11-2016 IPR000362 Fumarate lyase family SHALO_RS04010 bacdd7817c8b7d9d0a7a2125825d6f9d 461 Pfam PF14698 Argininosuccinate lyase C-terminal 366 432 8.4E-18 T 11-11-2016 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 SHALO_RS04010 bacdd7817c8b7d9d0a7a2125825d6f9d 461 ProSitePatterns PS00163 Fumarate lyases signature. 276 285 - T 11-11-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 SHALO_RS04010 bacdd7817c8b7d9d0a7a2125825d6f9d 461 Hamap MF_00006 Argininosuccinate lyase [argH]. 3 455 40.55 T 11-11-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 SHALO_RS04010 bacdd7817c8b7d9d0a7a2125825d6f9d 461 PRINTS PR00145 Argininosuccinate lyase family signature 232 256 1.0E-62 T 11-11-2016 SHALO_RS04010 bacdd7817c8b7d9d0a7a2125825d6f9d 461 PRINTS PR00145 Argininosuccinate lyase family signature 276 292 1.0E-62 T 11-11-2016 SHALO_RS04010 bacdd7817c8b7d9d0a7a2125825d6f9d 461 PRINTS PR00145 Argininosuccinate lyase family signature 194 210 1.0E-62 T 11-11-2016 SHALO_RS04010 bacdd7817c8b7d9d0a7a2125825d6f9d 461 PRINTS PR00145 Argininosuccinate lyase family signature 102 124 1.0E-62 T 11-11-2016 SHALO_RS04010 bacdd7817c8b7d9d0a7a2125825d6f9d 461 PRINTS PR00145 Argininosuccinate lyase family signature 143 163 1.0E-62 T 11-11-2016 SHALO_RS04010 bacdd7817c8b7d9d0a7a2125825d6f9d 461 PRINTS PR00145 Argininosuccinate lyase family signature 311 330 1.0E-62 T 11-11-2016 SHALO_RS04010 bacdd7817c8b7d9d0a7a2125825d6f9d 461 SUPERFAMILY SSF48557 7 458 2.98E-140 T 11-11-2016 IPR008948 L-Aspartase-like GO:0003824 SHALO_RS04010 bacdd7817c8b7d9d0a7a2125825d6f9d 461 TIGRFAM TIGR00838 argH: argininosuccinate lyase 4 454 1.2E-182 T 11-11-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 SHALO_RS04010 bacdd7817c8b7d9d0a7a2125825d6f9d 461 Gene3D G3DSA:1.20.200.10 108 374 1.5E-95 T 11-11-2016 SHALO_RS04010 bacdd7817c8b7d9d0a7a2125825d6f9d 461 Gene3D G3DSA:1.10.40.30 375 433 2.3E-23 T 11-11-2016 SHALO_RS02235 2cb4c19471bd4397e7b85fb3f8d3a401 193 Pfam PF01965 DJ-1/PfpI family 4 184 3.2E-52 T 11-11-2016 IPR002818 DJ-1/PfpI SHALO_RS02235 2cb4c19471bd4397e7b85fb3f8d3a401 193 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 5 187 3.7E-57 T 11-11-2016 IPR006286 Peptidase C56, PfpI SHALO_RS02235 2cb4c19471bd4397e7b85fb3f8d3a401 193 SUPERFAMILY SSF52317 4 188 9.17E-50 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like SHALO_RS02235 2cb4c19471bd4397e7b85fb3f8d3a401 193 Gene3D G3DSA:3.40.50.880 2 187 4.6E-59 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like SHALO_RS13580 fa223e22d556adaa09754e2c0a796258 226 Gene3D G3DSA:1.10.10.10 128 225 1.3E-26 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS13580 fa223e22d556adaa09754e2c0a796258 226 Pfam PF00072 Response regulator receiver domain 6 113 3.3E-23 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS13580 fa223e22d556adaa09754e2c0a796258 226 SUPERFAMILY SSF52172 3 127 1.22E-34 T 11-11-2016 IPR011006 CheY-like superfamily SHALO_RS13580 fa223e22d556adaa09754e2c0a796258 226 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 224 3.2E-21 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS13580 fa223e22d556adaa09754e2c0a796258 226 SUPERFAMILY SSF46894 127 224 3.12E-23 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SHALO_RS13580 fa223e22d556adaa09754e2c0a796258 226 Gene3D G3DSA:3.40.50.2300 3 127 4.2E-33 T 11-11-2016 SHALO_RS13580 fa223e22d556adaa09754e2c0a796258 226 SMART SM00862 148 224 1.4E-19 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS13580 fa223e22d556adaa09754e2c0a796258 226 SMART SM00448 3 113 1.2E-31 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS03175 661f9a11475a0739f3c9ab79ad50178c 84 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 5 83 2.7E-8 T 11-11-2016 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family SHALO_RS03175 661f9a11475a0739f3c9ab79ad50178c 84 SUPERFAMILY SSF143011 2 82 2.22E-20 T 11-11-2016 SHALO_RS14130 d80dbbc4df020c408351a33bdf1d4650 97 Gene3D G3DSA:3.30.70.900 4 96 1.6E-25 T 11-11-2016 SHALO_RS14130 d80dbbc4df020c408351a33bdf1d4650 97 Pfam PF03992 Antibiotic biosynthesis monooxygenase 4 78 2.8E-13 T 11-11-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain SHALO_RS14130 d80dbbc4df020c408351a33bdf1d4650 97 SUPERFAMILY SSF54909 2 91 1.32E-22 T 11-11-2016 IPR011008 Dimeric alpha-beta barrel SHALO_RS13960 0e8b17065312ec331fc28eb06a2e0db6 192 SUPERFAMILY SSF53328 4 191 9.29E-48 T 11-11-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SHALO_RS13960 0e8b17065312ec331fc28eb06a2e0db6 192 Gene3D G3DSA:3.40.50.170 4 191 3.4E-57 T 11-11-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SHALO_RS13960 0e8b17065312ec331fc28eb06a2e0db6 192 Pfam PF00551 Formyl transferase 4 185 8.0E-42 T 11-11-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SHALO_RS13960 0e8b17065312ec331fc28eb06a2e0db6 192 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 5 191 25.441 T 11-11-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 SHALO_RS13960 0e8b17065312ec331fc28eb06a2e0db6 192 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 4 191 7.7E-50 T 11-11-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 SHALO_RS11350 218ae4976c5aebda8ea7d35632cf7cb8 241 Pfam PF03746 LamB/YcsF family 1 240 1.4E-97 T 11-11-2016 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF SHALO_RS11350 218ae4976c5aebda8ea7d35632cf7cb8 241 SUPERFAMILY SSF88713 1 240 1.19E-93 T 11-11-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 SHALO_RS11350 218ae4976c5aebda8ea7d35632cf7cb8 241 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 1 241 40.747 T 11-11-2016 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF SHALO_RS03005 f625637a4a7f517c1a5420261fe46f76 1018 Gene3D G3DSA:3.30.450.20 348 456 8.2E-13 T 11-11-2016 SHALO_RS03005 f625637a4a7f517c1a5420261fe46f76 1018 Gene3D G3DSA:3.20.20.450 769 1012 8.7E-87 T 11-11-2016 IPR001633 EAL domain SHALO_RS03005 f625637a4a7f517c1a5420261fe46f76 1018 Gene3D G3DSA:3.30.70.270 592 755 6.1E-57 T 11-11-2016 SHALO_RS03005 f625637a4a7f517c1a5420261fe46f76 1018 SMART SM00052 761 1007 1.2E-99 T 11-11-2016 IPR001633 EAL domain SHALO_RS03005 f625637a4a7f517c1a5420261fe46f76 1018 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 347 464 5.6E-9 T 11-11-2016 IPR000014 PAS domain SHALO_RS03005 f625637a4a7f517c1a5420261fe46f76 1018 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 469 586 6.9E-18 T 11-11-2016 IPR000014 PAS domain SHALO_RS03005 f625637a4a7f517c1a5420261fe46f76 1018 SUPERFAMILY SSF53850 34 267 9.52E-21 T 11-11-2016 SHALO_RS03005 f625637a4a7f517c1a5420261fe46f76 1018 SUPERFAMILY SSF141868 768 1012 7.45E-84 T 11-11-2016 IPR001633 EAL domain SHALO_RS03005 f625637a4a7f517c1a5420261fe46f76 1018 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 586 750 9.3E-43 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS03005 f625637a4a7f517c1a5420261fe46f76 1018 SMART SM00267 579 751 1.7E-66 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS03005 f625637a4a7f517c1a5420261fe46f76 1018 Pfam PF13426 PAS domain 476 578 3.3E-15 T 11-11-2016 IPR000014 PAS domain SHALO_RS03005 f625637a4a7f517c1a5420261fe46f76 1018 SUPERFAMILY SSF55073 595 752 2.28E-51 T 11-11-2016 IPR029787 Nucleotide cyclase SHALO_RS03005 f625637a4a7f517c1a5420261fe46f76 1018 Pfam PF00563 EAL domain 768 1002 1.3E-69 T 11-11-2016 IPR001633 EAL domain SHALO_RS03005 f625637a4a7f517c1a5420261fe46f76 1018 Pfam PF08448 PAS fold 351 459 3.4E-8 T 11-11-2016 IPR013656 PAS fold-4 SHALO_RS03005 f625637a4a7f517c1a5420261fe46f76 1018 Gene3D G3DSA:3.40.190.10 114 216 5.8E-10 T 11-11-2016 SHALO_RS03005 f625637a4a7f517c1a5420261fe46f76 1018 SUPERFAMILY SSF55785 471 577 4.36E-25 T 11-11-2016 IPR000014 PAS domain SHALO_RS03005 f625637a4a7f517c1a5420261fe46f76 1018 Gene3D G3DSA:3.30.450.20 457 572 2.4E-24 T 11-11-2016 SHALO_RS03005 f625637a4a7f517c1a5420261fe46f76 1018 Pfam PF00990 Diguanylate cyclase, GGDEF domain 590 747 5.6E-50 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS03005 f625637a4a7f517c1a5420261fe46f76 1018 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 24 269 7.8E-48 T 11-11-2016 SHALO_RS03005 f625637a4a7f517c1a5420261fe46f76 1018 SUPERFAMILY SSF55785 356 465 1.77E-13 T 11-11-2016 IPR000014 PAS domain SHALO_RS03005 f625637a4a7f517c1a5420261fe46f76 1018 SMART SM00091 465 531 7.3E-4 T 11-11-2016 IPR000014 PAS domain SHALO_RS03005 f625637a4a7f517c1a5420261fe46f76 1018 SMART SM00091 345 411 8.1 T 11-11-2016 IPR000014 PAS domain SHALO_RS01300 438107ed44fd478d05ad6b20d994c8d9 401 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 3 397 2.2E-158 T 11-11-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 SHALO_RS01300 438107ed44fd478d05ad6b20d994c8d9 401 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 43 61 - T 11-11-2016 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site SHALO_RS01300 438107ed44fd478d05ad6b20d994c8d9 401 Gene3D G3DSA:3.20.20.10 21 252 3.9E-79 T 11-11-2016 IPR029066 PLP-binding barrel SHALO_RS01300 438107ed44fd478d05ad6b20d994c8d9 401 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 272 374 4.7E-18 T 11-11-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 SHALO_RS01300 438107ed44fd478d05ad6b20d994c8d9 401 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 256 275 3.7E-23 T 11-11-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 SHALO_RS01300 438107ed44fd478d05ad6b20d994c8d9 401 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 355 368 3.7E-23 T 11-11-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 SHALO_RS01300 438107ed44fd478d05ad6b20d994c8d9 401 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 63 75 3.7E-23 T 11-11-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 SHALO_RS01300 438107ed44fd478d05ad6b20d994c8d9 401 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 43 61 3.7E-23 T 11-11-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 SHALO_RS01300 438107ed44fd478d05ad6b20d994c8d9 401 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 176 189 3.7E-23 T 11-11-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 SHALO_RS01300 438107ed44fd478d05ad6b20d994c8d9 401 PRINTS PR01181 Diaminopimelate decarboxylase signature 150 159 1.1E-27 T 11-11-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 SHALO_RS01300 438107ed44fd478d05ad6b20d994c8d9 401 PRINTS PR01181 Diaminopimelate decarboxylase signature 61 78 1.1E-27 T 11-11-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 SHALO_RS01300 438107ed44fd478d05ad6b20d994c8d9 401 PRINTS PR01181 Diaminopimelate decarboxylase signature 284 302 1.1E-27 T 11-11-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 SHALO_RS01300 438107ed44fd478d05ad6b20d994c8d9 401 PRINTS PR01181 Diaminopimelate decarboxylase signature 365 387 1.1E-27 T 11-11-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 SHALO_RS01300 438107ed44fd478d05ad6b20d994c8d9 401 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 212 227 - T 11-11-2016 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site SHALO_RS01300 438107ed44fd478d05ad6b20d994c8d9 401 Gene3D G3DSA:2.40.37.10 253 398 1.2E-50 T 11-11-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 SHALO_RS01300 438107ed44fd478d05ad6b20d994c8d9 401 SUPERFAMILY SSF51419 12 268 1.21E-77 T 11-11-2016 IPR029066 PLP-binding barrel SHALO_RS01300 438107ed44fd478d05ad6b20d994c8d9 401 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 29 266 5.1E-61 T 11-11-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 SHALO_RS01300 438107ed44fd478d05ad6b20d994c8d9 401 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 1 398 41.583 T 11-11-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 SHALO_RS01300 438107ed44fd478d05ad6b20d994c8d9 401 SUPERFAMILY SSF50621 240 398 1.7E-54 T 11-11-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 SHALO_RS04355 a3abc02233d81b01efd31336d5f3a774 227 SUPERFAMILY SSF110997 154 215 6.28E-6 T 11-11-2016 IPR007730 Sporulation-related domain GO:0042834 SHALO_RS04355 a3abc02233d81b01efd31336d5f3a774 227 Pfam PF03330 Lytic transglycolase 43 129 1.2E-24 T 11-11-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain SHALO_RS04355 a3abc02233d81b01efd31336d5f3a774 227 SUPERFAMILY SSF50685 32 127 9.42E-12 T 11-11-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain SHALO_RS04355 a3abc02233d81b01efd31336d5f3a774 227 Gene3D G3DSA:2.40.40.10 79 126 1.0E-4 T 11-11-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain SHALO_RS04355 a3abc02233d81b01efd31336d5f3a774 227 Pfam PF05036 Sporulation related domain 153 218 5.7E-7 T 11-11-2016 IPR007730 Sporulation-related domain GO:0042834 SHALO_RS04355 a3abc02233d81b01efd31336d5f3a774 227 Gene3D G3DSA:3.30.70.1070 148 211 7.8E-5 T 11-11-2016 IPR007730 Sporulation-related domain GO:0042834 SHALO_RS04355 a3abc02233d81b01efd31336d5f3a774 227 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 44 175 5.0E-51 T 11-11-2016 IPR012997 Rare lipoprotein A SHALO_RS01235 2b653b5fa961906b08637ea9663a4e37 165 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 7 156 2.8E-53 T 11-11-2016 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 SHALO_RS01235 2b653b5fa961906b08637ea9663a4e37 165 SUPERFAMILY SSF46557 6 80 3.79E-25 T 11-11-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 SHALO_RS01235 2b653b5fa961906b08637ea9663a4e37 165 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 84 158 8.9E-26 T 11-11-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 SHALO_RS01235 2b653b5fa961906b08637ea9663a4e37 165 Pfam PF03449 Transcription elongation factor, N-terminal 7 76 6.4E-27 T 11-11-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 SHALO_RS01235 2b653b5fa961906b08637ea9663a4e37 165 Hamap MF_00105 Transcription elongation factor GreA [greA]. 4 157 28.976 T 11-11-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 SHALO_RS01235 2b653b5fa961906b08637ea9663a4e37 165 PIRSF PIRSF006092 1 160 1.7E-47 T 11-11-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 SHALO_RS01235 2b653b5fa961906b08637ea9663a4e37 165 Gene3D G3DSA:1.10.287.180 5 77 1.2E-28 T 11-11-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 SHALO_RS01235 2b653b5fa961906b08637ea9663a4e37 165 SUPERFAMILY SSF54534 83 158 2.22E-21 T 11-11-2016 SHALO_RS01235 2b653b5fa961906b08637ea9663a4e37 165 Gene3D G3DSA:3.10.50.30 78 158 6.2E-27 T 11-11-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 SHALO_RS14650 2e225ca79e33973cd14ccbdeb3879862 382 TIGRFAM TIGR01444 fkbM_fam: methyltransferase, FkbM family 206 338 7.2E-19 T 11-11-2016 IPR006342 Methyltransferase FkbM SHALO_RS14650 2e225ca79e33973cd14ccbdeb3879862 382 Gene3D G3DSA:3.40.50.150 193 377 7.7E-40 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS14650 2e225ca79e33973cd14ccbdeb3879862 382 SUPERFAMILY SSF53335 9 377 7.69E-55 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS14650 2e225ca79e33973cd14ccbdeb3879862 382 Gene3D G3DSA:3.40.50.720 16 82 2.3E-6 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS14650 2e225ca79e33973cd14ccbdeb3879862 382 Pfam PF05050 Methyltransferase FkbM domain 221 352 1.2E-15 T 11-11-2016 IPR006342 Methyltransferase FkbM SHALO_RS10750 876a566e9a05757330ab44d3ee24ab84 578 SMART SM00790 1 208 7.1E-85 T 11-11-2016 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 SHALO_RS10750 876a566e9a05757330ab44d3ee24ab84 578 Pfam PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain 5 205 7.4E-54 T 11-11-2016 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 SHALO_RS10750 876a566e9a05757330ab44d3ee24ab84 578 Pfam PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 225 559 8.7E-70 T 11-11-2016 IPR001203 Aldehyde ferredoxin oxidoreductase, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 SHALO_RS10750 876a566e9a05757330ab44d3ee24ab84 578 Gene3D G3DSA:3.60.9.10 3 207 4.3E-60 T 11-11-2016 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 SHALO_RS10750 876a566e9a05757330ab44d3ee24ab84 578 SUPERFAMILY SSF56228 2 208 1.7E-55 T 11-11-2016 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 SHALO_RS10750 876a566e9a05757330ab44d3ee24ab84 578 SUPERFAMILY SSF48310 214 576 9.68E-99 T 11-11-2016 IPR001203 Aldehyde ferredoxin oxidoreductase, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 SHALO_RS10750 876a566e9a05757330ab44d3ee24ab84 578 Gene3D G3DSA:1.10.569.10 245 422 2.1E-46 T 11-11-2016 IPR013984 Aldehyde ferredoxin oxidoreductase, domain 2 SHALO_RS14930 f9bb01f62f88aa8ce701efab801ab80d 339 Pfam PF00037 4Fe-4S binding domain 54 71 4.0E-6 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_RS14930 f9bb01f62f88aa8ce701efab801ab80d 339 Gene3D G3DSA:3.30.70.20 235 278 1.9E-11 T 11-11-2016 SHALO_RS14930 f9bb01f62f88aa8ce701efab801ab80d 339 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 56 67 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_RS14930 f9bb01f62f88aa8ce701efab801ab80d 339 Pfam PF13187 4Fe-4S dicluster domain 228 274 2.5E-7 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_RS14930 f9bb01f62f88aa8ce701efab801ab80d 339 SUPERFAMILY SSF54862 29 75 2.36E-10 T 11-11-2016 SHALO_RS14930 f9bb01f62f88aa8ce701efab801ab80d 339 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 228 239 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_RS14930 f9bb01f62f88aa8ce701efab801ab80d 339 Gene3D G3DSA:3.30.70.20 30 61 5.5E-7 T 11-11-2016 SHALO_RS14930 f9bb01f62f88aa8ce701efab801ab80d 339 SUPERFAMILY SSF54862 221 276 2.3E-13 T 11-11-2016 SHALO_RS14930 f9bb01f62f88aa8ce701efab801ab80d 339 Gene3D G3DSA:1.10.1060.10 62 89 7.5E-8 T 11-11-2016 SHALO_RS14930 f9bb01f62f88aa8ce701efab801ab80d 339 Gene3D G3DSA:1.10.1060.10 192 234 7.5E-8 T 11-11-2016 SHALO_RS00130 fe020892eab514e2b09fee23dba81974 358 Pfam PF13682 Chemoreceptor zinc-binding domain 257 318 1.2E-7 T 11-11-2016 IPR025991 Chemoreceptor zinc-binding domain SHALO_RS00130 fe020892eab514e2b09fee23dba81974 358 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 105 246 2.1E-36 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SHALO_RS00130 fe020892eab514e2b09fee23dba81974 358 SMART SM00283 37 296 1.1E-22 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SHALO_RS00130 fe020892eab514e2b09fee23dba81974 358 SUPERFAMILY SSF58104 60 259 7.06E-48 T 11-11-2016 SHALO_RS00130 fe020892eab514e2b09fee23dba81974 358 Gene3D G3DSA:1.10.287.950 64 258 8.4E-47 T 11-11-2016 SHALO_RS12230 f16346d7cb1aefb3f8a1b4182edf3be1 192 Pfam PF00297 Ribosomal protein L3 95 161 2.3E-8 T 11-11-2016 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_RS12230 f16346d7cb1aefb3f8a1b4182edf3be1 192 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 3 185 1.1E-51 T 11-11-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS12230 f16346d7cb1aefb3f8a1b4182edf3be1 192 SUPERFAMILY SSF50447 5 185 9.71E-45 T 11-11-2016 IPR009000 Translation protein, beta-barrel domain SHALO_RS12230 f16346d7cb1aefb3f8a1b4182edf3be1 192 Gene3D G3DSA:4.10.960.10 89 150 2.0E-20 T 11-11-2016 SHALO_RS07265 666bf0afe7ebf45df4eee822e5313411 571 Pfam PF00005 ABC transporter 352 500 1.5E-32 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_RS07265 666bf0afe7ebf45df4eee822e5313411 571 SUPERFAMILY SSF52540 332 570 2.44E-80 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS07265 666bf0afe7ebf45df4eee822e5313411 571 Pfam PF00664 ABC transporter transmembrane region 23 292 6.4E-47 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SHALO_RS07265 666bf0afe7ebf45df4eee822e5313411 571 SMART SM00382 361 562 9.2E-16 T 11-11-2016 IPR003593 AAA+ ATPase domain SHALO_RS07265 666bf0afe7ebf45df4eee822e5313411 571 Gene3D G3DSA:3.40.50.300 336 563 9.3E-76 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS07265 666bf0afe7ebf45df4eee822e5313411 571 SUPERFAMILY SSF90123 10 325 4.19E-77 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SHALO_RS07265 666bf0afe7ebf45df4eee822e5313411 571 Gene3D G3DSA:1.20.1560.10 10 321 7.7E-78 T 11-11-2016 SHALO_RS07265 666bf0afe7ebf45df4eee822e5313411 571 ProSitePatterns PS00211 ABC transporters family signature. 472 486 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHALO_RS03640 583a3508b3b8d4e52984b504e7369703 434 Gene3D G3DSA:1.10.3860.10 10 414 6.9E-92 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 SHALO_RS03640 583a3508b3b8d4e52984b504e7369703 434 Pfam PF00375 Sodium:dicarboxylate symporter family 14 409 5.4E-97 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 SHALO_RS03640 583a3508b3b8d4e52984b504e7369703 434 SUPERFAMILY SSF118215 14 409 2.22E-92 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 SHALO_RS03640 583a3508b3b8d4e52984b504e7369703 434 PRINTS PR00173 Glutamate-aspartate symporter signature 199 218 3.4E-23 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 SHALO_RS03640 583a3508b3b8d4e52984b504e7369703 434 PRINTS PR00173 Glutamate-aspartate symporter signature 8 28 3.4E-23 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 SHALO_RS03640 583a3508b3b8d4e52984b504e7369703 434 PRINTS PR00173 Glutamate-aspartate symporter signature 79 104 3.4E-23 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 SHALO_RS03640 583a3508b3b8d4e52984b504e7369703 434 PRINTS PR00173 Glutamate-aspartate symporter signature 299 325 3.4E-23 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 SHALO_RS03640 583a3508b3b8d4e52984b504e7369703 434 PRINTS PR00173 Glutamate-aspartate symporter signature 334 353 3.4E-23 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 SHALO_RS03640 583a3508b3b8d4e52984b504e7369703 434 PRINTS PR00173 Glutamate-aspartate symporter signature 49 69 3.4E-23 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 SHALO_RS09230 6920e4d64384efe1cc42d2b700f58cb8 464 Gene3D G3DSA:3.60.15.10 138 267 2.0E-45 T 11-11-2016 IPR001279 Metallo-beta-lactamase SHALO_RS09230 6920e4d64384efe1cc42d2b700f58cb8 464 Gene3D G3DSA:3.60.15.10 4 99 2.0E-45 T 11-11-2016 IPR001279 Metallo-beta-lactamase SHALO_RS09230 6920e4d64384efe1cc42d2b700f58cb8 464 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 394 455 7.6E-12 T 11-11-2016 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain SHALO_RS09230 6920e4d64384efe1cc42d2b700f58cb8 464 SUPERFAMILY SSF56281 3 463 3.28E-120 T 11-11-2016 IPR001279 Metallo-beta-lactamase SHALO_RS09230 6920e4d64384efe1cc42d2b700f58cb8 464 Pfam PF10996 Beta-Casp domain 255 380 1.3E-27 T 11-11-2016 IPR022712 Beta-Casp domain SHALO_RS09230 6920e4d64384efe1cc42d2b700f58cb8 464 SMART SM01027 255 380 2.6E-57 T 11-11-2016 IPR022712 Beta-Casp domain SHALO_RS09230 6920e4d64384efe1cc42d2b700f58cb8 464 Pfam PF16661 Metallo-beta-lactamase superfamily domain 19 185 9.0E-12 T 11-11-2016 IPR001279 Metallo-beta-lactamase SHALO_RS09230 6920e4d64384efe1cc42d2b700f58cb8 464 SMART SM00849 14 239 6.9E-12 T 11-11-2016 IPR001279 Metallo-beta-lactamase SHALO_RS12810 d6c2bcfa5ea64b2c40f7ffa8513a8aed 168 SUPERFAMILY SSF52218 1 164 9.25E-45 T 11-11-2016 IPR029039 Flavoprotein-like domain SHALO_RS12810 d6c2bcfa5ea64b2c40f7ffa8513a8aed 168 Gene3D G3DSA:3.40.50.360 1 164 2.5E-53 T 11-11-2016 IPR029039 Flavoprotein-like domain SHALO_RS12810 d6c2bcfa5ea64b2c40f7ffa8513a8aed 168 Pfam PF00258 Flavodoxin 5 156 5.6E-25 T 11-11-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 SHALO_RS12810 d6c2bcfa5ea64b2c40f7ffa8513a8aed 168 PIRSF PIRSF038996 1 168 9.4E-64 T 11-11-2016 IPR010086 Flavodoxin, long chain GO:0010181 SHALO_RS12810 d6c2bcfa5ea64b2c40f7ffa8513a8aed 168 TIGRFAM TIGR01752 flav_long: flavodoxin 2 164 4.9E-62 T 11-11-2016 IPR010086 Flavodoxin, long chain GO:0010181 SHALO_RS12810 d6c2bcfa5ea64b2c40f7ffa8513a8aed 168 ProSitePatterns PS00201 Flavodoxin signature. 5 21 - T 11-11-2016 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 SHALO_RS14970 bd5746a9219d687a0454ccf548387baf 268 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 22 264 1.4E-94 T 11-11-2016 IPR019591 Mrp/NBP35 ATP-binding protein SHALO_RS14970 bd5746a9219d687a0454ccf548387baf 268 ProSitePatterns PS01215 Mrp family signature. 129 145 - T 11-11-2016 IPR000808 Mrp, conserved site GO:0005524 SHALO_RS14970 bd5746a9219d687a0454ccf548387baf 268 SUPERFAMILY SSF52540 19 244 2.35E-53 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS14970 bd5746a9219d687a0454ccf548387baf 268 Gene3D G3DSA:3.40.50.300 13 264 3.0E-95 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS14970 bd5746a9219d687a0454ccf548387baf 268 Hamap MF_02040 Iron-sulfur cluster carrier protein. 15 265 35.374 T 11-11-2016 IPR019591 Mrp/NBP35 ATP-binding protein SHALO_RS04245 40067eea66a72c9c9a184a10060496c5 418 SUPERFAMILY SSF49265 47 125 2.18E-6 T 11-11-2016 IPR003961 Fibronectin type III GO:0005515 SHALO_RS04245 40067eea66a72c9c9a184a10060496c5 418 SUPERFAMILY SSF49265 151 310 4.1E-12 T 11-11-2016 IPR003961 Fibronectin type III GO:0005515 SHALO_RS04245 40067eea66a72c9c9a184a10060496c5 418 Gene3D G3DSA:2.60.40.10 152 232 6.4E-7 T 11-11-2016 IPR013783 Immunoglobulin-like fold SHALO_RS04245 40067eea66a72c9c9a184a10060496c5 418 SUPERFAMILY SSF49265 336 416 9.84E-7 T 11-11-2016 IPR003961 Fibronectin type III GO:0005515 SHALO_RS04245 40067eea66a72c9c9a184a10060496c5 418 Gene3D G3DSA:2.60.40.10 239 321 1.4E-12 T 11-11-2016 IPR013783 Immunoglobulin-like fold SHALO_RS04245 40067eea66a72c9c9a184a10060496c5 418 Gene3D G3DSA:2.60.40.10 334 412 1.2E-7 T 11-11-2016 IPR013783 Immunoglobulin-like fold SHALO_RS04245 40067eea66a72c9c9a184a10060496c5 418 Gene3D G3DSA:2.60.40.10 44 124 2.0E-8 T 11-11-2016 IPR013783 Immunoglobulin-like fold SHALO_RS04245 40067eea66a72c9c9a184a10060496c5 418 SMART SM00060 36 115 16.0 T 11-11-2016 IPR003961 Fibronectin type III GO:0005515 SHALO_RS04245 40067eea66a72c9c9a184a10060496c5 418 SMART SM00060 234 312 12.0 T 11-11-2016 IPR003961 Fibronectin type III GO:0005515 SHALO_RS04245 40067eea66a72c9c9a184a10060496c5 418 SMART SM00060 324 404 2.9 T 11-11-2016 IPR003961 Fibronectin type III GO:0005515 SHALO_RS04245 40067eea66a72c9c9a184a10060496c5 418 SMART SM00060 138 220 26.0 T 11-11-2016 IPR003961 Fibronectin type III GO:0005515 SHALO_RS13775 e010464a527a741caa24510cad709410 429 Gene3D G3DSA:3.30.565.10 310 421 2.6E-13 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS13775 e010464a527a741caa24510cad709410 429 Gene3D G3DSA:1.10.287.130 215 268 3.8E-5 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS13775 e010464a527a741caa24510cad709410 429 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 331 422 2.1E-9 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS13775 e010464a527a741caa24510cad709410 429 SUPERFAMILY SSF47384 207 273 1.08E-5 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS13775 e010464a527a741caa24510cad709410 429 SUPERFAMILY SSF55874 304 424 3.67E-17 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS13775 e010464a527a741caa24510cad709410 429 SMART SM00387 324 425 1.3E-9 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS11240 b95f596ea95e76b193efcf23c87f67c0 367 Pfam PF13439 Glycosyltransferase Family 4 13 161 2.0E-27 T 11-11-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 SHALO_RS11240 b95f596ea95e76b193efcf23c87f67c0 367 SUPERFAMILY SSF53756 3 361 1.06E-72 T 11-11-2016 SHALO_RS11240 b95f596ea95e76b193efcf23c87f67c0 367 Pfam PF00534 Glycosyl transferases group 1 180 334 3.3E-28 T 11-11-2016 IPR001296 Glycosyl transferase, family 1 SHALO_RS11240 b95f596ea95e76b193efcf23c87f67c0 367 Gene3D G3DSA:3.40.50.2000 144 343 1.3E-21 T 11-11-2016 SHALO_RS04775 b44dfcb2b7c6f5b0b5611ac7db334b09 271 Gene3D G3DSA:3.30.70.20 114 154 3.7E-6 T 11-11-2016 SHALO_RS04775 b44dfcb2b7c6f5b0b5611ac7db334b09 271 Pfam PF12800 4Fe-4S binding domain 148 165 0.0087 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_RS04775 b44dfcb2b7c6f5b0b5611ac7db334b09 271 Pfam PF12800 4Fe-4S binding domain 195 206 0.19 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_RS04775 b44dfcb2b7c6f5b0b5611ac7db334b09 271 TIGRFAM TIGR00397 mauM_napG: MauM/NapG family ferredoxin-type protein 12 227 4.2E-57 T 11-11-2016 IPR004494 MauM/NapG ferredoxin-type protein SHALO_RS04775 b44dfcb2b7c6f5b0b5611ac7db334b09 271 Gene3D G3DSA:3.30.70.20 70 113 1.3E-10 T 11-11-2016 SHALO_RS04775 b44dfcb2b7c6f5b0b5611ac7db334b09 271 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 62 73 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_RS04775 b44dfcb2b7c6f5b0b5611ac7db334b09 271 Gene3D G3DSA:3.30.70.20 155 209 9.5E-10 T 11-11-2016 SHALO_RS04775 b44dfcb2b7c6f5b0b5611ac7db334b09 271 Gene3D G3DSA:1.10.1060.10 42 69 2.0E-7 T 11-11-2016 SHALO_RS04775 b44dfcb2b7c6f5b0b5611ac7db334b09 271 SUPERFAMILY SSF54862 58 218 1.33E-21 T 11-11-2016 SHALO_RS04775 b44dfcb2b7c6f5b0b5611ac7db334b09 271 Pfam PF12838 4Fe-4S dicluster domain 62 116 8.3E-9 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_RS09225 cda3b385ceeea37b3dfdefef3c6d1036 969 SUPERFAMILY SSF47384 236 317 1.67E-21 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS09225 cda3b385ceeea37b3dfdefef3c6d1036 969 SUPERFAMILY SSF52172 493 618 2.56E-12 T 11-11-2016 IPR011006 CheY-like superfamily SHALO_RS09225 cda3b385ceeea37b3dfdefef3c6d1036 969 Pfam PF00512 His Kinase A (phospho-acceptor) domain 251 315 5.1E-18 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS09225 cda3b385ceeea37b3dfdefef3c6d1036 969 Gene3D G3DSA:3.40.50.2300 493 617 1.4E-13 T 11-11-2016 SHALO_RS09225 cda3b385ceeea37b3dfdefef3c6d1036 969 SMART SM00448 635 749 4.8E-34 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS09225 cda3b385ceeea37b3dfdefef3c6d1036 969 SMART SM00448 495 612 3.2E-7 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS09225 cda3b385ceeea37b3dfdefef3c6d1036 969 SUPERFAMILY SSF55874 304 475 1.26E-41 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS09225 cda3b385ceeea37b3dfdefef3c6d1036 969 Gene3D G3DSA:1.20.120.160 773 882 3.9E-11 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SHALO_RS09225 cda3b385ceeea37b3dfdefef3c6d1036 969 Pfam PF00672 HAMP domain 155 218 1.8E-8 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SHALO_RS09225 cda3b385ceeea37b3dfdefef3c6d1036 969 Pfam PF00072 Response regulator receiver domain 498 609 5.9E-9 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS09225 cda3b385ceeea37b3dfdefef3c6d1036 969 Pfam PF00072 Response regulator receiver domain 637 745 1.1E-23 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS09225 cda3b385ceeea37b3dfdefef3c6d1036 969 SMART SM00387 361 477 3.4E-32 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS09225 cda3b385ceeea37b3dfdefef3c6d1036 969 SMART SM00388 250 315 7.5E-23 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS09225 cda3b385ceeea37b3dfdefef3c6d1036 969 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 362 475 1.8E-24 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS09225 cda3b385ceeea37b3dfdefef3c6d1036 969 Gene3D G3DSA:3.30.565.10 316 478 1.2E-40 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS09225 cda3b385ceeea37b3dfdefef3c6d1036 969 Gene3D G3DSA:3.40.50.2300 633 759 1.7E-36 T 11-11-2016 SHALO_RS09225 cda3b385ceeea37b3dfdefef3c6d1036 969 SUPERFAMILY SSF52172 633 761 8.11E-36 T 11-11-2016 IPR011006 CheY-like superfamily SHALO_RS09225 cda3b385ceeea37b3dfdefef3c6d1036 969 SUPERFAMILY SSF47226 732 745 5.76E-14 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SHALO_RS09225 cda3b385ceeea37b3dfdefef3c6d1036 969 SUPERFAMILY SSF47226 773 856 5.76E-14 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SHALO_RS09225 cda3b385ceeea37b3dfdefef3c6d1036 969 Gene3D G3DSA:1.10.287.130 242 311 1.9E-16 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS09225 cda3b385ceeea37b3dfdefef3c6d1036 969 PRINTS PR00344 Bacterial sensor protein C-terminal signature 402 416 7.8E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS09225 cda3b385ceeea37b3dfdefef3c6d1036 969 PRINTS PR00344 Bacterial sensor protein C-terminal signature 420 430 7.8E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS09225 cda3b385ceeea37b3dfdefef3c6d1036 969 PRINTS PR00344 Bacterial sensor protein C-terminal signature 437 455 7.8E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS09225 cda3b385ceeea37b3dfdefef3c6d1036 969 PRINTS PR00344 Bacterial sensor protein C-terminal signature 461 474 7.8E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS12620 d32a40f07339288c79d3bea223fae2e2 671 Pfam PF07715 TonB-dependent Receptor Plug Domain 42 138 3.1E-12 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SHALO_RS12620 d32a40f07339288c79d3bea223fae2e2 671 Gene3D G3DSA:2.170.130.10 50 147 6.6E-16 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SHALO_RS12620 d32a40f07339288c79d3bea223fae2e2 671 Pfam PF00593 TonB dependent receptor 434 669 3.5E-24 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SHALO_RS12620 d32a40f07339288c79d3bea223fae2e2 671 SUPERFAMILY SSF56935 44 671 1.1E-85 T 11-11-2016 SHALO_RS12620 d32a40f07339288c79d3bea223fae2e2 671 Gene3D G3DSA:2.40.170.20 148 671 6.0E-72 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SHALO_RS12620 d32a40f07339288c79d3bea223fae2e2 671 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 654 671 - T 11-11-2016 IPR010917 TonB-dependent receptor, conserved site SHALO_RS08375 6a2773c945fef9945beca9cfe2712b91 341 SUPERFAMILY SSF46689 289 334 7.62E-8 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 SHALO_RS08375 6a2773c945fef9945beca9cfe2712b91 341 Pfam PF12833 Helix-turn-helix domain 260 336 5.2E-15 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SHALO_RS08375 6a2773c945fef9945beca9cfe2712b91 341 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 28 209 2.5E-30 T 11-11-2016 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal SHALO_RS08375 6a2773c945fef9945beca9cfe2712b91 341 Gene3D G3DSA:1.10.10.60 289 334 1.4E-7 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 SHALO_RS08375 6a2773c945fef9945beca9cfe2712b91 341 SMART SM00342 254 335 3.2E-15 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SHALO_RS12710 e92bbcd77a2668c753b48c243dd0656c 595 SUPERFAMILY SSF52540 340 582 3.91E-85 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS12710 e92bbcd77a2668c753b48c243dd0656c 595 Gene3D G3DSA:3.40.50.300 346 578 5.4E-75 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS12710 e92bbcd77a2668c753b48c243dd0656c 595 SMART SM00382 372 558 2.4E-14 T 11-11-2016 IPR003593 AAA+ ATPase domain SHALO_RS12710 e92bbcd77a2668c753b48c243dd0656c 595 SUPERFAMILY SSF90123 29 313 1.44E-31 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SHALO_RS12710 e92bbcd77a2668c753b48c243dd0656c 595 SUPERFAMILY SSF90123 488 497 1.44E-31 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SHALO_RS12710 e92bbcd77a2668c753b48c243dd0656c 595 Pfam PF00664 ABC transporter transmembrane region 68 302 2.4E-12 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SHALO_RS12710 e92bbcd77a2668c753b48c243dd0656c 595 Pfam PF00005 ABC transporter 363 512 5.2E-31 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_RS12710 e92bbcd77a2668c753b48c243dd0656c 595 ProSitePatterns PS00211 ABC transporters family signature. 484 498 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHALO_RS12710 e92bbcd77a2668c753b48c243dd0656c 595 Gene3D G3DSA:1.20.1560.10 32 331 1.0E-26 T 11-11-2016 SHALO_RS13510 b13a6d567d7f9b6df9ebeb597385cc80 611 TIGRFAM TIGR00475 selB: selenocysteine-specific translation elongation factor 5 610 2.3E-87 T 11-11-2016 IPR004535 Translation elongation factor, selenocysteine-specific GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 SHALO_RS13510 b13a6d567d7f9b6df9ebeb597385cc80 611 Gene3D G3DSA:1.10.10.10 555 610 3.0E-10 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS13510 b13a6d567d7f9b6df9ebeb597385cc80 611 Gene3D G3DSA:3.40.50.300 5 182 1.7E-41 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS13510 b13a6d567d7f9b6df9ebeb597385cc80 611 SUPERFAMILY SSF50447 174 263 3.34E-17 T 11-11-2016 IPR009000 Translation protein, beta-barrel domain SHALO_RS13510 b13a6d567d7f9b6df9ebeb597385cc80 611 Gene3D G3DSA:2.40.30.10 183 261 3.2E-21 T 11-11-2016 SHALO_RS13510 b13a6d567d7f9b6df9ebeb597385cc80 611 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 126 1.4E-12 T 11-11-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SHALO_RS13510 b13a6d567d7f9b6df9ebeb597385cc80 611 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 29 44 - T 11-11-2016 IPR031157 Tr-type G domain, conserved site SHALO_RS13510 b13a6d567d7f9b6df9ebeb597385cc80 611 SUPERFAMILY SSF46785 560 610 8.71E-7 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS13510 b13a6d567d7f9b6df9ebeb597385cc80 611 Pfam PF00009 Elongation factor Tu GTP binding domain 5 164 7.9E-30 T 11-11-2016 SHALO_RS13510 b13a6d567d7f9b6df9ebeb597385cc80 611 SUPERFAMILY SSF50465 280 354 4.32E-8 T 11-11-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal SHALO_RS13510 b13a6d567d7f9b6df9ebeb597385cc80 611 Pfam PF09107 Elongation factor SelB, winged helix 565 610 3.2E-10 T 11-11-2016 IPR015191 Translation elongation factor SelB, winged helix, type 3 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 SHALO_RS13510 b13a6d567d7f9b6df9ebeb597385cc80 611 SUPERFAMILY SSF52540 5 193 3.2E-40 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS12705 e0e827e21335aa821bfc570684d47c41 411 SUPERFAMILY SSF103473 12 396 1.7E-36 T 11-11-2016 IPR020846 Major facilitator superfamily domain SHALO_RS12705 e0e827e21335aa821bfc570684d47c41 411 PRINTS PR01035 Tetracycline resistance protein signature 137 159 1.9E-5 T 11-11-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 SHALO_RS12705 e0e827e21335aa821bfc570684d47c41 411 PRINTS PR01035 Tetracycline resistance protein signature 252 272 1.9E-5 T 11-11-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 SHALO_RS12705 e0e827e21335aa821bfc570684d47c41 411 PRINTS PR01035 Tetracycline resistance protein signature 47 66 1.9E-5 T 11-11-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 SHALO_RS12705 e0e827e21335aa821bfc570684d47c41 411 PRINTS PR01035 Tetracycline resistance protein signature 19 35 1.9E-5 T 11-11-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 SHALO_RS12705 e0e827e21335aa821bfc570684d47c41 411 Pfam PF07690 Major Facilitator Superfamily 17 337 1.5E-26 T 11-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SHALO_RS12705 e0e827e21335aa821bfc570684d47c41 411 Gene3D G3DSA:1.20.1250.20 216 394 4.3E-9 T 11-11-2016 SHALO_RS12705 e0e827e21335aa821bfc570684d47c41 411 Gene3D G3DSA:1.20.1250.20 14 194 8.8E-14 T 11-11-2016 SHALO_RS00050 c87727b52d968637e54c1df8eae51ad2 400 SUPERFAMILY SSF54631 275 391 1.05E-10 T 11-11-2016 SHALO_RS00050 c87727b52d968637e54c1df8eae51ad2 400 SUPERFAMILY SSF52540 41 270 5.66E-74 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS00050 c87727b52d968637e54c1df8eae51ad2 400 Pfam PF00571 CBS domain 344 392 0.0027 T 11-11-2016 IPR000644 CBS domain SHALO_RS00050 c87727b52d968637e54c1df8eae51ad2 400 Gene3D G3DSA:3.40.50.300 2 266 4.4E-78 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS00050 c87727b52d968637e54c1df8eae51ad2 400 Gene3D G3DSA:3.10.580.10 274 392 2.9E-17 T 11-11-2016 SHALO_RS00050 c87727b52d968637e54c1df8eae51ad2 400 SMART SM00382 54 251 1.8E-19 T 11-11-2016 IPR003593 AAA+ ATPase domain SHALO_RS00050 c87727b52d968637e54c1df8eae51ad2 400 Pfam PF00005 ABC transporter 46 193 2.3E-32 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_RS00050 c87727b52d968637e54c1df8eae51ad2 400 ProSitePatterns PS00211 ABC transporters family signature. 166 180 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHALO_RS00050 c87727b52d968637e54c1df8eae51ad2 400 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 38 392 3.3E-148 T 11-11-2016 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 SHALO_RS13020 6e7eccb22d92a745ca20e191f7017fb8 461 SUPERFAMILY SSF56954 53 456 1.18E-50 T 11-11-2016 SHALO_RS13020 6e7eccb22d92a745ca20e191f7017fb8 461 Gene3D G3DSA:1.20.1600.10 55 453 2.0E-43 T 11-11-2016 SHALO_RS13020 6e7eccb22d92a745ca20e191f7017fb8 461 Pfam PF02321 Outer membrane efflux protein 59 235 9.8E-18 T 11-11-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SHALO_RS13020 6e7eccb22d92a745ca20e191f7017fb8 461 Pfam PF02321 Outer membrane efflux protein 264 445 1.9E-14 T 11-11-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SHALO_RS02060 6b6c9abaa8affd41ab2477be8c917989 317 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 6 314 1.8E-109 T 11-11-2016 IPR011852 TRAP transporter solute receptor, TAXI family SHALO_RS02060 6b6c9abaa8affd41ab2477be8c917989 317 Gene3D G3DSA:3.40.190.10 247 315 6.7E-61 T 11-11-2016 SHALO_RS02060 6b6c9abaa8affd41ab2477be8c917989 317 Gene3D G3DSA:3.40.190.10 22 104 6.7E-61 T 11-11-2016 SHALO_RS02060 6b6c9abaa8affd41ab2477be8c917989 317 SUPERFAMILY SSF53850 22 316 7.0E-80 T 11-11-2016 SHALO_RS02060 6b6c9abaa8affd41ab2477be8c917989 317 Gene3D G3DSA:3.40.190.10 113 246 1.7E-34 T 11-11-2016 SHALO_RS02060 6b6c9abaa8affd41ab2477be8c917989 317 Pfam PF16868 NMT1-like family 26 314 4.8E-97 T 11-11-2016 IPR011852 TRAP transporter solute receptor, TAXI family SHALO_RS01120 1eb5af73a41c27a27937887319bb4b26 180 Pfam PF09624 Protein of unknown function (DUF2393) 21 180 3.6E-40 T 11-11-2016 IPR013417 Conserved hypothetical protein CHP02588 SHALO_RS08535 3ed9c099517eb5260cffc732bca1ef0d 187 Gene3D G3DSA:3.40.30.10 11 173 7.0E-21 T 11-11-2016 IPR012336 Thioredoxin-like fold SHALO_RS08535 3ed9c099517eb5260cffc732bca1ef0d 187 Pfam PF00578 AhpC/TSA family 12 135 7.5E-12 T 11-11-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 SHALO_RS08535 3ed9c099517eb5260cffc732bca1ef0d 187 SUPERFAMILY SSF52833 6 182 1.96E-37 T 11-11-2016 IPR012336 Thioredoxin-like fold SHALO_RS09865 396a79a3fca0e57ec85c0a72edfe3738 290 Pfam PF00795 Carbon-nitrogen hydrolase 3 267 2.8E-56 T 11-11-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 SHALO_RS09865 396a79a3fca0e57ec85c0a72edfe3738 290 Gene3D G3DSA:3.60.110.10 1 286 8.4E-98 T 11-11-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 SHALO_RS09865 396a79a3fca0e57ec85c0a72edfe3738 290 SUPERFAMILY SSF56317 1 286 1.06E-79 T 11-11-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 SHALO_RS12185 0b04ac66e436f6b01df85dd3f4e89908 83 Pfam PF00366 Ribosomal protein S17 9 74 9.0E-30 T 11-11-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_RS12185 0b04ac66e436f6b01df85dd3f4e89908 83 PRINTS PR00973 Ribosomal protein S17 family signature 55 65 1.2E-11 T 11-11-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_RS12185 0b04ac66e436f6b01df85dd3f4e89908 83 PRINTS PR00973 Ribosomal protein S17 family signature 65 72 1.2E-11 T 11-11-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_RS12185 0b04ac66e436f6b01df85dd3f4e89908 83 PRINTS PR00973 Ribosomal protein S17 family signature 23 46 1.2E-11 T 11-11-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_RS12185 0b04ac66e436f6b01df85dd3f4e89908 83 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 4 70 7.0E-18 T 11-11-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_RS12185 0b04ac66e436f6b01df85dd3f4e89908 83 Gene3D G3DSA:2.40.50.140 4 79 4.6E-30 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold SHALO_RS12185 0b04ac66e436f6b01df85dd3f4e89908 83 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 2 80 22.523 T 11-11-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_RS12185 0b04ac66e436f6b01df85dd3f4e89908 83 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 4 74 8.6E-33 T 11-11-2016 IPR019984 Ribosomal protein S17, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_RS12185 0b04ac66e436f6b01df85dd3f4e89908 83 ProSitePatterns PS00056 Ribosomal protein S17 signature. 55 67 - T 11-11-2016 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_RS12185 0b04ac66e436f6b01df85dd3f4e89908 83 SUPERFAMILY SSF50249 4 79 4.71E-28 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold SHALO_RS02455 6f0ae11ad9c95abc8c3c7ec0f88e25b3 692 Pfam PF03764 Elongation factor G, domain IV 478 597 5.0E-49 T 11-11-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 SHALO_RS02455 6f0ae11ad9c95abc8c3c7ec0f88e25b3 692 Pfam PF00679 Elongation factor G C-terminus 599 685 1.2E-33 T 11-11-2016 IPR000640 Translation elongation factor EFG, V domain SHALO_RS02455 6f0ae11ad9c95abc8c3c7ec0f88e25b3 692 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 11 180 2.1E-35 T 11-11-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SHALO_RS02455 6f0ae11ad9c95abc8c3c7ec0f88e25b3 692 PRINTS PR00315 GTP-binding elongation factor signature 78 88 3.8E-16 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SHALO_RS02455 6f0ae11ad9c95abc8c3c7ec0f88e25b3 692 PRINTS PR00315 GTP-binding elongation factor signature 12 25 3.8E-16 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SHALO_RS02455 6f0ae11ad9c95abc8c3c7ec0f88e25b3 692 PRINTS PR00315 GTP-binding elongation factor signature 94 105 3.8E-16 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SHALO_RS02455 6f0ae11ad9c95abc8c3c7ec0f88e25b3 692 PRINTS PR00315 GTP-binding elongation factor signature 58 66 3.8E-16 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SHALO_RS02455 6f0ae11ad9c95abc8c3c7ec0f88e25b3 692 PRINTS PR00315 GTP-binding elongation factor signature 130 139 3.8E-16 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SHALO_RS02455 6f0ae11ad9c95abc8c3c7ec0f88e25b3 692 SUPERFAMILY SSF50447 265 401 1.36E-33 T 11-11-2016 IPR009000 Translation protein, beta-barrel domain SHALO_RS02455 6f0ae11ad9c95abc8c3c7ec0f88e25b3 692 Gene3D G3DSA:3.40.50.300 9 286 8.2E-106 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS02455 6f0ae11ad9c95abc8c3c7ec0f88e25b3 692 SUPERFAMILY SSF52540 7 281 8.93E-109 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS02455 6f0ae11ad9c95abc8c3c7ec0f88e25b3 692 Gene3D G3DSA:3.30.70.870 404 479 6.0E-39 T 11-11-2016 SHALO_RS02455 6f0ae11ad9c95abc8c3c7ec0f88e25b3 692 Pfam PF00009 Elongation factor Tu GTP binding domain 10 281 1.3E-69 T 11-11-2016 SHALO_RS02455 6f0ae11ad9c95abc8c3c7ec0f88e25b3 692 SMART SM00889 479 597 2.2E-73 T 11-11-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 SHALO_RS02455 6f0ae11ad9c95abc8c3c7ec0f88e25b3 692 Gene3D G3DSA:2.40.30.10 305 403 2.2E-35 T 11-11-2016 SHALO_RS02455 6f0ae11ad9c95abc8c3c7ec0f88e25b3 692 SMART SM00838 599 686 3.5E-61 T 11-11-2016 IPR000640 Translation elongation factor EFG, V domain SHALO_RS02455 6f0ae11ad9c95abc8c3c7ec0f88e25b3 692 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 11-11-2016 IPR031157 Tr-type G domain, conserved site SHALO_RS02455 6f0ae11ad9c95abc8c3c7ec0f88e25b3 692 SUPERFAMILY SSF54980 602 689 4.6E-32 T 11-11-2016 IPR009022 Elongation factor G, III-V domain SHALO_RS02455 6f0ae11ad9c95abc8c3c7ec0f88e25b3 692 SUPERFAMILY SSF54211 478 598 9.1E-46 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SHALO_RS02455 6f0ae11ad9c95abc8c3c7ec0f88e25b3 692 Gene3D G3DSA:3.30.70.240 597 690 1.6E-36 T 11-11-2016 IPR000640 Translation elongation factor EFG, V domain SHALO_RS02455 6f0ae11ad9c95abc8c3c7ec0f88e25b3 692 Pfam PF14492 Elongation Factor G, domain II 403 477 1.4E-34 T 11-11-2016 IPR009022 Elongation factor G, III-V domain SHALO_RS02455 6f0ae11ad9c95abc8c3c7ec0f88e25b3 692 Gene3D G3DSA:3.30.230.10 483 596 2.8E-52 T 11-11-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SHALO_RS02455 6f0ae11ad9c95abc8c3c7ec0f88e25b3 692 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 691 0.0 T 11-11-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 SHALO_RS02455 6f0ae11ad9c95abc8c3c7ec0f88e25b3 692 Hamap MF_00054_B Elongation factor G [fusA]. 6 690 111.741 T 11-11-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 SHALO_RS02455 6f0ae11ad9c95abc8c3c7ec0f88e25b3 692 Pfam PF03144 Elongation factor Tu domain 2 323 390 3.5E-13 T 11-11-2016 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 SHALO_RS02455 6f0ae11ad9c95abc8c3c7ec0f88e25b3 692 SUPERFAMILY SSF54980 403 480 8.27E-25 T 11-11-2016 IPR009022 Elongation factor G, III-V domain SHALO_RS14135 81d51d29612afbd93d194ed036a0cbdf 491 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 27 481 2.6E-130 T 11-11-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 SHALO_RS14135 81d51d29612afbd93d194ed036a0cbdf 491 Pfam PF00939 Sodium:sulfate symporter transmembrane region 10 484 2.8E-133 T 11-11-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 SHALO_RS14135 81d51d29612afbd93d194ed036a0cbdf 491 PIRSF PIRSF002457 1 487 4.0E-132 T 11-11-2016 IPR030676 Citrate carrier CitT-related SHALO_RS03715 e4f167f134177faf2fc2b9060c3dc58e 731 SUPERFAMILY SSF55785 25 131 1.4E-17 T 11-11-2016 IPR000014 PAS domain SHALO_RS03715 e4f167f134177faf2fc2b9060c3dc58e 731 Pfam PF08448 PAS fold 26 132 1.1E-8 T 11-11-2016 IPR013656 PAS fold-4 SHALO_RS03715 e4f167f134177faf2fc2b9060c3dc58e 731 Gene3D G3DSA:3.30.450.40 280 435 1.5E-5 T 11-11-2016 IPR029016 GAF domain-like SHALO_RS03715 e4f167f134177faf2fc2b9060c3dc58e 731 SMART SM00086 223 265 1.4E-6 T 11-11-2016 IPR001610 PAC motif SHALO_RS03715 e4f167f134177faf2fc2b9060c3dc58e 731 SMART SM00086 91 131 8.0 T 11-11-2016 IPR001610 PAC motif SHALO_RS03715 e4f167f134177faf2fc2b9060c3dc58e 731 SMART SM00086 512 554 5.7E-4 T 11-11-2016 IPR001610 PAC motif SHALO_RS03715 e4f167f134177faf2fc2b9060c3dc58e 731 SUPERFAMILY SSF55781 309 440 1.28E-7 T 11-11-2016 IPR029016 GAF domain-like SHALO_RS03715 e4f167f134177faf2fc2b9060c3dc58e 731 Gene3D G3DSA:3.30.70.270 566 728 4.8E-55 T 11-11-2016 SHALO_RS03715 e4f167f134177faf2fc2b9060c3dc58e 731 Pfam PF13426 PAS domain 453 552 1.5E-12 T 11-11-2016 IPR000014 PAS domain SHALO_RS03715 e4f167f134177faf2fc2b9060c3dc58e 731 SUPERFAMILY SSF55073 570 727 4.08E-51 T 11-11-2016 IPR029787 Nucleotide cyclase SHALO_RS03715 e4f167f134177faf2fc2b9060c3dc58e 731 Pfam PF00990 Diguanylate cyclase, GGDEF domain 565 721 4.3E-49 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS03715 e4f167f134177faf2fc2b9060c3dc58e 731 Gene3D G3DSA:3.30.450.20 129 263 5.6E-24 T 11-11-2016 SHALO_RS03715 e4f167f134177faf2fc2b9060c3dc58e 731 Gene3D G3DSA:3.30.450.20 24 128 1.6E-14 T 11-11-2016 SHALO_RS03715 e4f167f134177faf2fc2b9060c3dc58e 731 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 24 138 2.4E-18 T 11-11-2016 IPR000014 PAS domain SHALO_RS03715 e4f167f134177faf2fc2b9060c3dc58e 731 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 147 270 1.4E-21 T 11-11-2016 IPR000014 PAS domain SHALO_RS03715 e4f167f134177faf2fc2b9060c3dc58e 731 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 444 561 8.4E-14 T 11-11-2016 IPR000014 PAS domain SHALO_RS03715 e4f167f134177faf2fc2b9060c3dc58e 731 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 561 724 8.3E-43 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS03715 e4f167f134177faf2fc2b9060c3dc58e 731 SMART SM00267 554 726 1.0E-69 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS03715 e4f167f134177faf2fc2b9060c3dc58e 731 SMART SM00091 20 86 1.5E-6 T 11-11-2016 IPR000014 PAS domain SHALO_RS03715 e4f167f134177faf2fc2b9060c3dc58e 731 SMART SM00091 440 506 2.7 T 11-11-2016 IPR000014 PAS domain SHALO_RS03715 e4f167f134177faf2fc2b9060c3dc58e 731 SMART SM00091 150 216 2.3E-9 T 11-11-2016 IPR000014 PAS domain SHALO_RS03715 e4f167f134177faf2fc2b9060c3dc58e 731 SUPERFAMILY SSF55785 137 262 5.96E-22 T 11-11-2016 IPR000014 PAS domain SHALO_RS03715 e4f167f134177faf2fc2b9060c3dc58e 731 Pfam PF00989 PAS fold 152 262 4.8E-17 T 11-11-2016 IPR013767 PAS fold GO:0006355 SHALO_RS03715 e4f167f134177faf2fc2b9060c3dc58e 731 SUPERFAMILY SSF55785 446 552 2.79E-25 T 11-11-2016 IPR000014 PAS domain SHALO_RS03715 e4f167f134177faf2fc2b9060c3dc58e 731 Gene3D G3DSA:3.30.450.20 450 552 9.5E-23 T 11-11-2016 SHALO_RS05920 ba5ae2e8103155e9294fd59d3dbe299e 201 SUPERFAMILY SSF158472 79 126 1.31E-6 T 11-11-2016 SHALO_RS05920 ba5ae2e8103155e9294fd59d3dbe299e 201 Gene3D G3DSA:1.10.287.130 122 188 2.9E-12 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS05920 ba5ae2e8103155e9294fd59d3dbe299e 201 Pfam PF00672 HAMP domain 61 125 1.9E-7 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SHALO_RS05920 ba5ae2e8103155e9294fd59d3dbe299e 201 Pfam PF00512 His Kinase A (phospho-acceptor) domain 133 189 1.7E-10 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS05920 ba5ae2e8103155e9294fd59d3dbe299e 201 SMART SM00304 76 129 2.4E-4 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SHALO_RS05920 ba5ae2e8103155e9294fd59d3dbe299e 201 SUPERFAMILY SSF47384 113 191 2.75E-16 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS05920 ba5ae2e8103155e9294fd59d3dbe299e 201 SMART SM00388 130 195 3.1E-7 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS02960 40f3528515b00322b4e9ccefaa0cd1a0 273 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 23 61 4.0E-7 T 11-11-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 SHALO_RS02960 40f3528515b00322b4e9ccefaa0cd1a0 273 SUPERFAMILY SSF52374 1 273 3.25E-92 T 11-11-2016 SHALO_RS02960 40f3528515b00322b4e9ccefaa0cd1a0 273 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 273 1.2E-95 T 11-11-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 SHALO_RS02960 40f3528515b00322b4e9ccefaa0cd1a0 273 Pfam PF02569 Pantoate-beta-alanine ligase 2 271 1.7E-89 T 11-11-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 SHALO_RS02960 40f3528515b00322b4e9ccefaa0cd1a0 273 Gene3D G3DSA:3.40.50.620 1 170 8.4E-65 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHALO_RS02960 40f3528515b00322b4e9ccefaa0cd1a0 273 Gene3D G3DSA:3.30.1300.10 172 273 2.0E-27 T 11-11-2016 SHALO_RS02960 40f3528515b00322b4e9ccefaa0cd1a0 273 Hamap MF_00158 Pantothenate synthetase [panC]. 2 273 35.517 T 11-11-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 SHALO_RS03890 6495cfac8cf0bdfc31812c465c21b18c 244 Gene3D G3DSA:3.40.50.150 7 175 5.3E-19 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS03890 6495cfac8cf0bdfc31812c465c21b18c 244 SUPERFAMILY SSF53335 7 189 5.75E-19 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS11270 b06641459074b9a202898d81c6925f9b 472 Pfam PF01467 Cytidylyltransferase-like 347 437 1.3E-15 T 11-11-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 SHALO_RS11270 b06641459074b9a202898d81c6925f9b 472 Hamap MF_01603 Bifunctional protein HldE [hldE]. 2 472 40.815 T 11-11-2016 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167 SHALO_RS11270 b06641459074b9a202898d81c6925f9b 472 Pfam PF00294 pfkB family carbohydrate kinase 10 304 1.0E-47 T 11-11-2016 IPR011611 Carbohydrate kinase PfkB SHALO_RS11270 b06641459074b9a202898d81c6925f9b 472 Gene3D G3DSA:3.40.50.620 342 452 2.3E-32 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHALO_RS11270 b06641459074b9a202898d81c6925f9b 472 SUPERFAMILY SSF52374 343 469 1.1E-25 T 11-11-2016 SHALO_RS11270 b06641459074b9a202898d81c6925f9b 472 Gene3D G3DSA:3.40.1190.20 10 313 6.3E-65 T 11-11-2016 IPR029056 Ribokinase-like SHALO_RS11270 b06641459074b9a202898d81c6925f9b 472 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 339 470 4.4E-57 T 11-11-2016 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167 SHALO_RS11270 b06641459074b9a202898d81c6925f9b 472 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 7 312 8.5E-115 T 11-11-2016 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167 SHALO_RS11270 b06641459074b9a202898d81c6925f9b 472 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 344 406 2.4E-14 T 11-11-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 SHALO_RS11270 b06641459074b9a202898d81c6925f9b 472 SUPERFAMILY SSF53613 10 315 2.34E-58 T 11-11-2016 IPR029056 Ribokinase-like SHALO_RS04205 2a00dbf10f25e6b2ed921cc00dcf6f92 338 SMART SM00387 235 338 8.3E-13 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS04205 2a00dbf10f25e6b2ed921cc00dcf6f92 338 SUPERFAMILY SSF55874 192 329 1.31E-24 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS04205 2a00dbf10f25e6b2ed921cc00dcf6f92 338 Gene3D G3DSA:1.10.287.130 125 191 9.8E-8 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS04205 2a00dbf10f25e6b2ed921cc00dcf6f92 338 SMART SM00388 131 195 3.0E-9 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS04205 2a00dbf10f25e6b2ed921cc00dcf6f92 338 SUPERFAMILY SSF47384 124 191 9.22E-9 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS04205 2a00dbf10f25e6b2ed921cc00dcf6f92 338 Gene3D G3DSA:3.30.565.10 195 335 4.6E-23 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS04205 2a00dbf10f25e6b2ed921cc00dcf6f92 338 PRINTS PR00344 Bacterial sensor protein C-terminal signature 276 290 8.3E-10 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS04205 2a00dbf10f25e6b2ed921cc00dcf6f92 338 PRINTS PR00344 Bacterial sensor protein C-terminal signature 303 321 8.3E-10 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS04205 2a00dbf10f25e6b2ed921cc00dcf6f92 338 PRINTS PR00344 Bacterial sensor protein C-terminal signature 292 302 8.3E-10 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS04205 2a00dbf10f25e6b2ed921cc00dcf6f92 338 Pfam PF00512 His Kinase A (phospho-acceptor) domain 131 191 7.7E-10 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS04205 2a00dbf10f25e6b2ed921cc00dcf6f92 338 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 240 332 3.4E-10 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS08630 f23e55e1f35d94d6daaa1edf236af632 82 SUPERFAMILY SSF47413 21 53 2.82E-6 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SHALO_RS08630 f23e55e1f35d94d6daaa1edf236af632 82 Gene3D G3DSA:1.10.260.40 21 54 8.7E-9 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SHALO_RS00250 65c194ab5d3ed87989afb898e1dd293b 188 SUPERFAMILY SSF53474 2 183 1.76E-19 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold SHALO_RS00250 65c194ab5d3ed87989afb898e1dd293b 188 Gene3D G3DSA:3.40.50.1820 2 181 2.4E-18 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold SHALO_RS00250 65c194ab5d3ed87989afb898e1dd293b 188 Pfam PF05728 Uncharacterised protein family (UPF0227) 1 182 2.2E-43 T 11-11-2016 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA SHALO_RS12355 63f20a0a00d20a2b16ef95e6812580cb 507 SMART SM00388 276 347 5.0E-6 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS12355 63f20a0a00d20a2b16ef95e6812580cb 507 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 394 500 1.1E-12 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS12355 63f20a0a00d20a2b16ef95e6812580cb 507 SUPERFAMILY SSF55785 151 250 3.06E-28 T 11-11-2016 IPR000014 PAS domain SHALO_RS12355 63f20a0a00d20a2b16ef95e6812580cb 507 Gene3D G3DSA:1.10.287.130 267 331 1.3E-10 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS12355 63f20a0a00d20a2b16ef95e6812580cb 507 SMART SM00091 136 204 4.9E-6 T 11-11-2016 IPR000014 PAS domain SHALO_RS12355 63f20a0a00d20a2b16ef95e6812580cb 507 SUPERFAMILY SSF55874 337 489 1.57E-23 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS12355 63f20a0a00d20a2b16ef95e6812580cb 507 SMART SM00086 210 253 0.0044 T 11-11-2016 IPR001610 PAC motif SHALO_RS12355 63f20a0a00d20a2b16ef95e6812580cb 507 Gene3D G3DSA:3.30.450.20 150 252 1.0E-28 T 11-11-2016 SHALO_RS12355 63f20a0a00d20a2b16ef95e6812580cb 507 Gene3D G3DSA:3.30.565.10 332 502 4.1E-23 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS12355 63f20a0a00d20a2b16ef95e6812580cb 507 Pfam PF13426 PAS domain 150 251 4.6E-17 T 11-11-2016 IPR000014 PAS domain SHALO_RS12355 63f20a0a00d20a2b16ef95e6812580cb 507 SUPERFAMILY SSF47384 262 348 3.14E-13 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS12355 63f20a0a00d20a2b16ef95e6812580cb 507 Pfam PF00512 His Kinase A (phospho-acceptor) domain 285 346 4.8E-7 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS12355 63f20a0a00d20a2b16ef95e6812580cb 507 SMART SM00387 393 503 4.6E-17 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS12355 63f20a0a00d20a2b16ef95e6812580cb 507 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 151 259 1.2E-18 T 11-11-2016 IPR000014 PAS domain SHALO_RS02035 978ab022201b5b8ea2df85d4ecc6e0d9 342 Gene3D G3DSA:3.30.360.10 145 320 3.1E-80 T 11-11-2016 SHALO_RS02035 978ab022201b5b8ea2df85d4ecc6e0d9 342 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 3 337 38.478 T 11-11-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 SHALO_RS02035 978ab022201b5b8ea2df85d4ecc6e0d9 342 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 5 121 2.5E-33 T 11-11-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 SHALO_RS02035 978ab022201b5b8ea2df85d4ecc6e0d9 342 PIRSF PIRSF000148 3 341 9.4E-125 T 11-11-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 SHALO_RS02035 978ab022201b5b8ea2df85d4ecc6e0d9 342 Gene3D G3DSA:3.40.50.720 1 144 1.0E-59 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS02035 978ab022201b5b8ea2df85d4ecc6e0d9 342 SMART SM00859 5 122 7.1E-44 T 11-11-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 SHALO_RS02035 978ab022201b5b8ea2df85d4ecc6e0d9 342 SUPERFAMILY SSF51735 3 159 2.55E-50 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS02035 978ab022201b5b8ea2df85d4ecc6e0d9 342 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 234 248 - T 11-11-2016 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 SHALO_RS02035 978ab022201b5b8ea2df85d4ecc6e0d9 342 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 5 338 1.2E-137 T 11-11-2016 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 SHALO_RS02035 978ab022201b5b8ea2df85d4ecc6e0d9 342 SUPERFAMILY SSF55347 132 324 2.16E-76 T 11-11-2016 SHALO_RS02035 978ab022201b5b8ea2df85d4ecc6e0d9 342 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 142 322 3.4E-60 T 11-11-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 SHALO_RS06535 7b47da0dd2578d2d9850058c4ec01548 140 SUPERFAMILY SSF54862 4 68 6.7E-16 T 11-11-2016 SHALO_RS06535 7b47da0dd2578d2d9850058c4ec01548 140 Gene3D G3DSA:3.30.70.20 4 52 8.2E-14 T 11-11-2016 SHALO_RS06535 7b47da0dd2578d2d9850058c4ec01548 140 Gene3D G3DSA:3.30.70.20 53 97 3.3E-5 T 11-11-2016 SHALO_RS06535 7b47da0dd2578d2d9850058c4ec01548 140 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 15 26 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_RS06535 7b47da0dd2578d2d9850058c4ec01548 140 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 49 60 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_RS06535 7b47da0dd2578d2d9850058c4ec01548 140 Pfam PF13187 4Fe-4S dicluster domain 14 64 2.6E-8 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_RS10935 649ad38d9ec8eed112c17ba7655d3cfc 227 Pfam PF08238 Sel1 repeat 112 142 2.3E-5 T 11-11-2016 IPR006597 Sel1-like repeat SHALO_RS10935 649ad38d9ec8eed112c17ba7655d3cfc 227 Pfam PF08238 Sel1 repeat 180 210 6.5E-5 T 11-11-2016 IPR006597 Sel1-like repeat SHALO_RS10935 649ad38d9ec8eed112c17ba7655d3cfc 227 Pfam PF08238 Sel1 repeat 75 102 0.0013 T 11-11-2016 IPR006597 Sel1-like repeat SHALO_RS10935 649ad38d9ec8eed112c17ba7655d3cfc 227 Pfam PF08238 Sel1 repeat 37 71 1.5E-5 T 11-11-2016 IPR006597 Sel1-like repeat SHALO_RS10935 649ad38d9ec8eed112c17ba7655d3cfc 227 Pfam PF08238 Sel1 repeat 145 173 160.0 T 11-11-2016 IPR006597 Sel1-like repeat SHALO_RS10935 649ad38d9ec8eed112c17ba7655d3cfc 227 SUPERFAMILY SSF81901 90 218 1.02E-29 T 11-11-2016 SHALO_RS10935 649ad38d9ec8eed112c17ba7655d3cfc 227 SMART SM00671 143 174 0.25 T 11-11-2016 IPR006597 Sel1-like repeat SHALO_RS10935 649ad38d9ec8eed112c17ba7655d3cfc 227 SMART SM00671 107 142 5.4E-8 T 11-11-2016 IPR006597 Sel1-like repeat SHALO_RS10935 649ad38d9ec8eed112c17ba7655d3cfc 227 SMART SM00671 72 106 1.7E-4 T 11-11-2016 IPR006597 Sel1-like repeat SHALO_RS10935 649ad38d9ec8eed112c17ba7655d3cfc 227 SMART SM00671 175 210 4.3E-6 T 11-11-2016 IPR006597 Sel1-like repeat SHALO_RS10935 649ad38d9ec8eed112c17ba7655d3cfc 227 SMART SM00671 36 71 1.4E-7 T 11-11-2016 IPR006597 Sel1-like repeat SHALO_RS10935 649ad38d9ec8eed112c17ba7655d3cfc 227 Gene3D G3DSA:1.25.40.10 28 217 2.7E-46 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SHALO_RS10935 649ad38d9ec8eed112c17ba7655d3cfc 227 SUPERFAMILY SSF81901 28 86 4.58E-13 T 11-11-2016 SHALO_RS02870 315428cab32341b2c493fe7a1925ccb6 634 Gene3D G3DSA:2.170.130.10 39 150 5.0E-11 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SHALO_RS02870 315428cab32341b2c493fe7a1925ccb6 634 SUPERFAMILY SSF56935 35 634 4.03E-33 T 11-11-2016 SHALO_RS02870 315428cab32341b2c493fe7a1925ccb6 634 Gene3D G3DSA:2.40.170.20 151 634 4.3E-17 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SHALO_RS02870 315428cab32341b2c493fe7a1925ccb6 634 Pfam PF07715 TonB-dependent Receptor Plug Domain 42 141 1.4E-8 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SHALO_RS04275 36b6945536963da9d2e7d0957a509a7e 71 Gene3D G3DSA:3.90.940.10 17 67 4.9E-10 T 11-11-2016 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 SHALO_RS04275 36b6945536963da9d2e7d0957a509a7e 71 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 4 66 13.615 T 11-11-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHALO_RS04275 36b6945536963da9d2e7d0957a509a7e 71 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 17 63 1.5E-9 T 11-11-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHALO_RS04275 36b6945536963da9d2e7d0957a509a7e 71 SUPERFAMILY SSF63562 15 68 2.35E-15 T 11-11-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 SHALO_RS04275 36b6945536963da9d2e7d0957a509a7e 71 SMART SM01409 10 65 1.9E-11 T 11-11-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 SHALO_RS04275 36b6945536963da9d2e7d0957a509a7e 71 Pfam PF01192 RNA polymerase Rpb6 18 64 2.5E-12 T 11-11-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 SHALO_RS04315 36e020febc32779b326001eba9736132 279 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 109 277 8.0E-55 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS04315 36e020febc32779b326001eba9736132 279 SUPERFAMILY SSF55073 118 276 3.53E-48 T 11-11-2016 IPR029787 Nucleotide cyclase SHALO_RS04315 36e020febc32779b326001eba9736132 279 Pfam PF00990 Diguanylate cyclase, GGDEF domain 114 273 5.4E-48 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS04315 36e020febc32779b326001eba9736132 279 SMART SM00267 102 277 2.7E-58 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS04315 36e020febc32779b326001eba9736132 279 Gene3D G3DSA:3.30.70.270 115 276 7.4E-53 T 11-11-2016 SHALO_RS06055 75656e8d4d84d88d9df47f90df4005c1 410 SUPERFAMILY SSF56281 6 244 1.24E-42 T 11-11-2016 IPR001279 Metallo-beta-lactamase SHALO_RS06055 75656e8d4d84d88d9df47f90df4005c1 410 Gene3D G3DSA:3.60.15.10 6 244 3.6E-77 T 11-11-2016 IPR001279 Metallo-beta-lactamase SHALO_RS06055 75656e8d4d84d88d9df47f90df4005c1 410 Pfam PF00258 Flavodoxin 259 391 4.1E-7 T 11-11-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 SHALO_RS06055 75656e8d4d84d88d9df47f90df4005c1 410 Pfam PF00753 Metallo-beta-lactamase superfamily 36 173 3.4E-10 T 11-11-2016 IPR001279 Metallo-beta-lactamase SHALO_RS06055 75656e8d4d84d88d9df47f90df4005c1 410 SUPERFAMILY SSF52218 257 400 4.05E-31 T 11-11-2016 IPR029039 Flavoprotein-like domain SHALO_RS06055 75656e8d4d84d88d9df47f90df4005c1 410 PIRSF PIRSF005243 2 404 3.5E-119 T 11-11-2016 IPR016440 Rubredoxin-oxygen oxidoreductase GO:0009055|GO:0010181|GO:0016491|GO:0046872 SHALO_RS06055 75656e8d4d84d88d9df47f90df4005c1 410 Gene3D G3DSA:3.40.50.360 258 398 6.8E-35 T 11-11-2016 IPR029039 Flavoprotein-like domain SHALO_RS06055 75656e8d4d84d88d9df47f90df4005c1 410 SMART SM00849 36 225 2.0E-26 T 11-11-2016 IPR001279 Metallo-beta-lactamase SHALO_RS01255 28feeae055b7d8524c25b493b5fbc875 776 Pfam PF01584 CheW-like domain 501 629 1.9E-25 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SHALO_RS01255 28feeae055b7d8524c25b493b5fbc875 776 SMART SM00260 489 628 8.5E-43 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SHALO_RS01255 28feeae055b7d8524c25b493b5fbc875 776 SUPERFAMILY SSF47226 4 114 9.94E-32 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SHALO_RS01255 28feeae055b7d8524c25b493b5fbc875 776 Gene3D G3DSA:1.10.287.560 241 310 8.2E-19 T 11-11-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 SHALO_RS01255 28feeae055b7d8524c25b493b5fbc875 776 Gene3D G3DSA:2.30.30.40 584 628 1.8E-24 T 11-11-2016 SHALO_RS01255 28feeae055b7d8524c25b493b5fbc875 776 Gene3D G3DSA:2.30.30.40 497 518 1.8E-24 T 11-11-2016 SHALO_RS01255 28feeae055b7d8524c25b493b5fbc875 776 SMART SM00448 655 770 1.4E-31 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS01255 28feeae055b7d8524c25b493b5fbc875 776 Gene3D G3DSA:3.30.565.10 311 496 4.0E-37 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS01255 28feeae055b7d8524c25b493b5fbc875 776 Gene3D G3DSA:2.40.50.180 521 583 3.6E-15 T 11-11-2016 SHALO_RS01255 28feeae055b7d8524c25b493b5fbc875 776 Pfam PF01627 Hpt domain 6 105 5.3E-18 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SHALO_RS01255 28feeae055b7d8524c25b493b5fbc875 776 SUPERFAMILY SSF55874 311 495 7.6E-39 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS01255 28feeae055b7d8524c25b493b5fbc875 776 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 357 496 6.1E-15 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS01255 28feeae055b7d8524c25b493b5fbc875 776 SUPERFAMILY SSF47384 242 310 1.18E-12 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS01255 28feeae055b7d8524c25b493b5fbc875 776 Pfam PF00072 Response regulator receiver domain 657 770 8.9E-23 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS01255 28feeae055b7d8524c25b493b5fbc875 776 Gene3D G3DSA:1.20.120.160 2 143 1.8E-43 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SHALO_RS01255 28feeae055b7d8524c25b493b5fbc875 776 SMART SM00073 4 101 1.4E-30 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SHALO_RS01255 28feeae055b7d8524c25b493b5fbc875 776 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 242 309 2.7E-17 T 11-11-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 SHALO_RS01255 28feeae055b7d8524c25b493b5fbc875 776 PRINTS PR00344 Bacterial sensor protein C-terminal signature 457 475 2.2E-11 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS01255 28feeae055b7d8524c25b493b5fbc875 776 PRINTS PR00344 Bacterial sensor protein C-terminal signature 481 494 2.2E-11 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS01255 28feeae055b7d8524c25b493b5fbc875 776 PRINTS PR00344 Bacterial sensor protein C-terminal signature 399 413 2.2E-11 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS01255 28feeae055b7d8524c25b493b5fbc875 776 SMART SM00387 354 497 2.2E-21 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS01255 28feeae055b7d8524c25b493b5fbc875 776 SUPERFAMILY SSF52172 654 774 1.28E-32 T 11-11-2016 IPR011006 CheY-like superfamily SHALO_RS01255 28feeae055b7d8524c25b493b5fbc875 776 SMART SM01231 241 309 1.3E-17 T 11-11-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 SHALO_RS01255 28feeae055b7d8524c25b493b5fbc875 776 SUPERFAMILY SSF50341 496 628 4.05E-33 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SHALO_RS01255 28feeae055b7d8524c25b493b5fbc875 776 Gene3D G3DSA:3.40.50.2300 656 772 6.0E-35 T 11-11-2016 SHALO_RS08430 0e1a354434c12908a97cc065213a97b2 314 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 230 246 - T 11-11-2016 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 SHALO_RS08430 0e1a354434c12908a97cc065213a97b2 314 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 3 296 36.941 T 11-11-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 SHALO_RS08430 0e1a354434c12908a97cc065213a97b2 314 SUPERFAMILY SSF53850 2 209 7.49E-75 T 11-11-2016 SHALO_RS08430 0e1a354434c12908a97cc065213a97b2 314 Gene3D G3DSA:3.40.190.10 109 198 5.5E-35 T 11-11-2016 SHALO_RS08430 0e1a354434c12908a97cc065213a97b2 314 Gene3D G3DSA:3.40.190.10 2 108 1.2E-46 T 11-11-2016 SHALO_RS08430 0e1a354434c12908a97cc065213a97b2 314 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 226 293 4.8E-13 T 11-11-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 SHALO_RS08430 0e1a354434c12908a97cc065213a97b2 314 SUPERFAMILY SSF54782 219 304 8.37E-21 T 11-11-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 SHALO_RS08430 0e1a354434c12908a97cc065213a97b2 314 PIRSF PIRSF001438 1 311 3.0E-108 T 11-11-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 SHALO_RS08430 0e1a354434c12908a97cc065213a97b2 314 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 4 208 5.5E-73 T 11-11-2016 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 SHALO_RS08430 0e1a354434c12908a97cc065213a97b2 314 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 4 296 3.3E-100 T 11-11-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 SHALO_RS08430 0e1a354434c12908a97cc065213a97b2 314 Gene3D G3DSA:3.30.160.40 220 304 1.3E-20 T 11-11-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 SHALO_RS08430 0e1a354434c12908a97cc065213a97b2 314 PRINTS PR00151 Porphobilinogen deaminase signature 43 63 8.9E-46 T 11-11-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 SHALO_RS08430 0e1a354434c12908a97cc065213a97b2 314 PRINTS PR00151 Porphobilinogen deaminase signature 229 246 8.9E-46 T 11-11-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 SHALO_RS08430 0e1a354434c12908a97cc065213a97b2 314 PRINTS PR00151 Porphobilinogen deaminase signature 141 158 8.9E-46 T 11-11-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 SHALO_RS08430 0e1a354434c12908a97cc065213a97b2 314 PRINTS PR00151 Porphobilinogen deaminase signature 122 139 8.9E-46 T 11-11-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 SHALO_RS08430 0e1a354434c12908a97cc065213a97b2 314 PRINTS PR00151 Porphobilinogen deaminase signature 74 93 8.9E-46 T 11-11-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 SHALO_RS09620 e4541da47c8aa5841bd026899c184660 305 SUPERFAMILY SSF56524 55 301 5.49E-76 T 11-11-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 SHALO_RS09620 e4541da47c8aa5841bd026899c184660 305 Pfam PF00174 Oxidoreductase molybdopterin binding domain 83 243 8.4E-24 T 11-11-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 SHALO_RS09620 e4541da47c8aa5841bd026899c184660 305 Gene3D G3DSA:3.90.420.10 57 302 9.6E-60 T 11-11-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 SHALO_RS04875 09d93b3169002228fa0ae4996c396f55 539 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 63 313 3.4E-37 T 11-11-2016 IPR000914 Solute-binding protein family 5 domain SHALO_RS04875 09d93b3169002228fa0ae4996c396f55 539 SUPERFAMILY SSF53850 40 509 1.52E-47 T 11-11-2016 SHALO_RS04875 09d93b3169002228fa0ae4996c396f55 539 Gene3D G3DSA:3.10.105.10 285 469 5.9E-5 T 11-11-2016 SHALO_RS04875 09d93b3169002228fa0ae4996c396f55 539 Gene3D G3DSA:3.40.190.10 180 284 2.3E-10 T 11-11-2016 SHALO_RS04875 09d93b3169002228fa0ae4996c396f55 539 Gene3D G3DSA:3.90.76.10 42 179 1.0E-20 T 11-11-2016 SHALO_RS05050 932a7e37efea7a7476bf3bd8f04f7d85 88 Gene3D G3DSA:2.30.33.40 2 88 2.0E-26 T 11-11-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SHALO_RS05050 932a7e37efea7a7476bf3bd8f04f7d85 88 Hamap MF_00580 10 kDa chaperonin [groS]. 2 88 18.602 T 11-11-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SHALO_RS05050 932a7e37efea7a7476bf3bd8f04f7d85 88 SMART SM00883 2 88 2.0E-39 T 11-11-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SHALO_RS05050 932a7e37efea7a7476bf3bd8f04f7d85 88 Pfam PF00166 Chaperonin 10 Kd subunit 3 87 4.5E-27 T 11-11-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SHALO_RS05050 932a7e37efea7a7476bf3bd8f04f7d85 88 PRINTS PR00297 10kDa chaperonin signature 25 46 1.1E-21 T 11-11-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SHALO_RS05050 932a7e37efea7a7476bf3bd8f04f7d85 88 PRINTS PR00297 10kDa chaperonin signature 75 88 1.1E-21 T 11-11-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SHALO_RS05050 932a7e37efea7a7476bf3bd8f04f7d85 88 PRINTS PR00297 10kDa chaperonin signature 54 66 1.1E-21 T 11-11-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SHALO_RS05050 932a7e37efea7a7476bf3bd8f04f7d85 88 PRINTS PR00297 10kDa chaperonin signature 3 18 1.1E-21 T 11-11-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SHALO_RS05050 932a7e37efea7a7476bf3bd8f04f7d85 88 SUPERFAMILY SSF50129 1 87 1.41E-24 T 11-11-2016 IPR011032 GroES-like SHALO_RS07550 56bf57e5f17337fb273e977dce554f03 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 219 3.4E-9 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS07550 56bf57e5f17337fb273e977dce554f03 223 SUPERFAMILY SSF52172 4 171 1.38E-32 T 11-11-2016 IPR011006 CheY-like superfamily SHALO_RS07550 56bf57e5f17337fb273e977dce554f03 223 Pfam PF00072 Response regulator receiver domain 7 116 2.6E-23 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS07550 56bf57e5f17337fb273e977dce554f03 223 SMART SM00862 150 219 3.3E-9 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS07550 56bf57e5f17337fb273e977dce554f03 223 Gene3D G3DSA:1.10.10.10 153 220 3.6E-11 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS07550 56bf57e5f17337fb273e977dce554f03 223 Gene3D G3DSA:3.40.50.2300 4 152 2.4E-31 T 11-11-2016 SHALO_RS07550 56bf57e5f17337fb273e977dce554f03 223 SMART SM00448 5 116 1.2E-23 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS02230 1983aa264baf6c5942556254a7efc7b2 129 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 122 6.1E-8 T 11-11-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain SHALO_RS02230 1983aa264baf6c5942556254a7efc7b2 129 Gene3D G3DSA:3.10.180.10 8 124 1.3E-27 T 11-11-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SHALO_RS02230 1983aa264baf6c5942556254a7efc7b2 129 SUPERFAMILY SSF54593 4 123 3.99E-21 T 11-11-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SHALO_RS05250 98cd9dce91f4326336a27444a75e586f 441 Pfam PF13437 HlyD family secretion protein 293 406 3.4E-16 T 11-11-2016 SHALO_RS05250 98cd9dce91f4326336a27444a75e586f 441 Pfam PF13533 Biotin-lipoyl like 75 101 4.8E-6 T 11-11-2016 SHALO_RS05250 98cd9dce91f4326336a27444a75e586f 441 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 305 326 2.3E-41 T 11-11-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 SHALO_RS05250 98cd9dce91f4326336a27444a75e586f 441 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 362 385 2.3E-41 T 11-11-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 SHALO_RS05250 98cd9dce91f4326336a27444a75e586f 441 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 338 362 2.3E-41 T 11-11-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 SHALO_RS05250 98cd9dce91f4326336a27444a75e586f 441 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 405 420 2.3E-41 T 11-11-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 SHALO_RS05250 98cd9dce91f4326336a27444a75e586f 441 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 78 98 2.3E-41 T 11-11-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 SHALO_RS05250 98cd9dce91f4326336a27444a75e586f 441 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 36 59 2.3E-41 T 11-11-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 SHALO_RS05250 98cd9dce91f4326336a27444a75e586f 441 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 420 440 2.3E-41 T 11-11-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 SHALO_RS05250 98cd9dce91f4326336a27444a75e586f 441 Gene3D G3DSA:2.40.50.100 70 100 3.8E-17 T 11-11-2016 SHALO_RS05250 98cd9dce91f4326336a27444a75e586f 441 Gene3D G3DSA:2.40.50.100 290 325 3.8E-17 T 11-11-2016 SHALO_RS05250 98cd9dce91f4326336a27444a75e586f 441 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 28 441 1.6E-121 T 11-11-2016 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 SHALO_RS05250 98cd9dce91f4326336a27444a75e586f 441 ProSitePatterns PS00543 HlyD family secretion proteins signature. 405 427 - T 11-11-2016 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 SHALO_RS06695 39919c3ce469b122a946604ccdcd057a 267 Pfam PF02110 Hydroxyethylthiazole kinase family 13 253 5.3E-80 T 11-11-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 SHALO_RS06695 39919c3ce469b122a946604ccdcd057a 267 TIGRFAM TIGR00694 thiM: hydroxyethylthiazole kinase 13 254 5.9E-82 T 11-11-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 SHALO_RS06695 39919c3ce469b122a946604ccdcd057a 267 Gene3D G3DSA:3.40.1190.20 7 264 2.9E-84 T 11-11-2016 IPR029056 Ribokinase-like SHALO_RS06695 39919c3ce469b122a946604ccdcd057a 267 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 19 26 8.3E-38 T 11-11-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 SHALO_RS06695 39919c3ce469b122a946604ccdcd057a 267 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 120 134 8.3E-38 T 11-11-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 SHALO_RS06695 39919c3ce469b122a946604ccdcd057a 267 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 89 106 8.3E-38 T 11-11-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 SHALO_RS06695 39919c3ce469b122a946604ccdcd057a 267 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 164 181 8.3E-38 T 11-11-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 SHALO_RS06695 39919c3ce469b122a946604ccdcd057a 267 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 32 53 8.3E-38 T 11-11-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 SHALO_RS06695 39919c3ce469b122a946604ccdcd057a 267 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 63 71 8.3E-38 T 11-11-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 SHALO_RS06695 39919c3ce469b122a946604ccdcd057a 267 SUPERFAMILY SSF53613 11 257 3.45E-53 T 11-11-2016 IPR029056 Ribokinase-like SHALO_RS06695 39919c3ce469b122a946604ccdcd057a 267 PIRSF PIRSF000513 5 266 1.1E-84 T 11-11-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 SHALO_RS06695 39919c3ce469b122a946604ccdcd057a 267 Hamap MF_00228 Hydroxyethylthiazole kinase [thiM]. 13 258 31.228 T 11-11-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 SHALO_RS01090 adfad9521c7b18fe23f814ed083661d3 108 Gene3D G3DSA:3.40.1350.10 9 106 2.3E-26 T 11-11-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 Reactome: R-HSA-6784531 SHALO_RS01090 adfad9521c7b18fe23f814ed083661d3 108 SUPERFAMILY SSF52980 8 103 1.29E-21 T 11-11-2016 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 SHALO_RS01090 adfad9521c7b18fe23f814ed083661d3 108 Hamap MF_00048 UPF0102 protein YraN [yraN]. 2 108 17.571 T 11-11-2016 IPR003509 Uncharacterised protein family UPF0102 SHALO_RS01090 adfad9521c7b18fe23f814ed083661d3 108 Pfam PF02021 Uncharacterised protein family UPF0102 9 95 1.2E-20 T 11-11-2016 IPR003509 Uncharacterised protein family UPF0102 SHALO_RS13915 2e8b7b277ce172f7c0cee880725c8c44 396 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 195 214 - T 11-11-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site SHALO_RS13915 2e8b7b277ce172f7c0cee880725c8c44 396 SUPERFAMILY SSF53383 3 375 2.08E-104 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase SHALO_RS13915 2e8b7b277ce172f7c0cee880725c8c44 396 TIGRFAM TIGR03403 nifS_epsilon: cysteine desulfurase, NifS family 3 384 1.5E-220 T 11-11-2016 IPR017773 Cysteine desulfurase NifS, proteobacteria GO:0006534|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 SHALO_RS13915 2e8b7b277ce172f7c0cee880725c8c44 396 Gene3D G3DSA:3.90.1150.10 250 373 8.4E-42 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SHALO_RS13915 2e8b7b277ce172f7c0cee880725c8c44 396 Gene3D G3DSA:3.40.640.10 15 249 5.0E-87 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SHALO_RS13915 2e8b7b277ce172f7c0cee880725c8c44 396 PIRSF PIRSF005572 1 382 3.8E-123 T 11-11-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 SHALO_RS13915 2e8b7b277ce172f7c0cee880725c8c44 396 Pfam PF00266 Aminotransferase class-V 3 365 9.7E-86 T 11-11-2016 IPR000192 Aminotransferase class V domain SHALO_RS06090 c6c80bbff2c9d63f6ff0278e7abd0348 618 Gene3D G3DSA:2.30.30.60 435 484 2.1E-13 T 11-11-2016 SHALO_RS06090 c6c80bbff2c9d63f6ff0278e7abd0348 618 SUPERFAMILY SSF82861 333 417 8.63E-12 T 11-11-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 SHALO_RS06090 c6c80bbff2c9d63f6ff0278e7abd0348 618 SUPERFAMILY SSF82689 488 592 6.8E-19 T 11-11-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 SHALO_RS06090 c6c80bbff2c9d63f6ff0278e7abd0348 618 Gene3D G3DSA:3.30.70.100 490 580 2.4E-9 T 11-11-2016 SHALO_RS06090 c6c80bbff2c9d63f6ff0278e7abd0348 618 SUPERFAMILY SSF50182 418 485 3.24E-14 T 11-11-2016 IPR010920 LSM domain SHALO_RS06090 c6c80bbff2c9d63f6ff0278e7abd0348 618 Pfam PF00924 Mechanosensitive ion channel 376 582 1.0E-41 T 11-11-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 SHALO_RS11695 8f9db1d262c018f3af7585294141812a 167 Gene3D G3DSA:3.30.1360.80 1 165 8.9E-71 T 11-11-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 SHALO_RS11695 8f9db1d262c018f3af7585294141812a 167 PIRSF PIRSF006160 1 162 4.1E-64 T 11-11-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 SHALO_RS11695 8f9db1d262c018f3af7585294141812a 167 SUPERFAMILY SSF63411 4 162 1.37E-64 T 11-11-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 SHALO_RS11695 8f9db1d262c018f3af7585294141812a 167 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 1 159 34.294 T 11-11-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 SHALO_RS11695 8f9db1d262c018f3af7585294141812a 167 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 77 95 1.1E-47 T 11-11-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 SHALO_RS11695 8f9db1d262c018f3af7585294141812a 167 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 5 23 1.1E-47 T 11-11-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 SHALO_RS11695 8f9db1d262c018f3af7585294141812a 167 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 121 140 1.1E-47 T 11-11-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 SHALO_RS11695 8f9db1d262c018f3af7585294141812a 167 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 28 46 1.1E-47 T 11-11-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 SHALO_RS11695 8f9db1d262c018f3af7585294141812a 167 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 49 67 1.1E-47 T 11-11-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 SHALO_RS11695 8f9db1d262c018f3af7585294141812a 167 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 9 153 2.0E-65 T 11-11-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 SHALO_RS11695 8f9db1d262c018f3af7585294141812a 167 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 4 154 6.5E-61 T 11-11-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 SHALO_RS01130 5993f247e161261e19b832b30d0a4f51 227 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 129 212 8.1E-15 T 11-11-2016 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 SHALO_RS01130 5993f247e161261e19b832b30d0a4f51 227 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 127 209 1.1E-28 T 11-11-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 SHALO_RS01130 5993f247e161261e19b832b30d0a4f51 227 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 54 107 1.0E-16 T 11-11-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 SHALO_RS01130 5993f247e161261e19b832b30d0a4f51 227 SUPERFAMILY SSF101386 125 213 1.33E-23 T 11-11-2016 SHALO_RS01130 5993f247e161261e19b832b30d0a4f51 227 SUPERFAMILY SSF141734 4 111 2.22E-48 T 11-11-2016 SHALO_RS01130 5993f247e161261e19b832b30d0a4f51 227 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 7 214 34.516 T 11-11-2016 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19 SHALO_RS01130 5993f247e161261e19b832b30d0a4f51 227 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 31 104 2.5E-35 T 11-11-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 SHALO_RS01130 5993f247e161261e19b832b30d0a4f51 227 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 5 108 31.622 T 11-11-2016 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 SHALO_RS01130 5993f247e161261e19b832b30d0a4f51 227 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 123 209 18.452 T 11-11-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 SHALO_RS02625 9db9bae64acfaf70b083609c9fbbc9a2 342 TIGRFAM TIGR00492 alr: alanine racemase 2 342 4.8E-52 T 11-11-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 SHALO_RS02625 9db9bae64acfaf70b083609c9fbbc9a2 342 PRINTS PR00992 Alanine racemase signature 143 154 5.7E-27 T 11-11-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 SHALO_RS02625 9db9bae64acfaf70b083609c9fbbc9a2 342 PRINTS PR00992 Alanine racemase signature 263 278 5.7E-27 T 11-11-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 SHALO_RS02625 9db9bae64acfaf70b083609c9fbbc9a2 342 PRINTS PR00992 Alanine racemase signature 190 217 5.7E-27 T 11-11-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 SHALO_RS02625 9db9bae64acfaf70b083609c9fbbc9a2 342 PRINTS PR00992 Alanine racemase signature 25 41 5.7E-27 T 11-11-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 SHALO_RS02625 9db9bae64acfaf70b083609c9fbbc9a2 342 PRINTS PR00992 Alanine racemase signature 110 122 5.7E-27 T 11-11-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 SHALO_RS02625 9db9bae64acfaf70b083609c9fbbc9a2 342 PRINTS PR00992 Alanine racemase signature 246 261 5.7E-27 T 11-11-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 SHALO_RS02625 9db9bae64acfaf70b083609c9fbbc9a2 342 SUPERFAMILY SSF50621 225 342 1.22E-23 T 11-11-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 SHALO_RS02625 9db9bae64acfaf70b083609c9fbbc9a2 342 Hamap MF_01201 Alanine racemase. 1 342 19.849 T 11-11-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 SHALO_RS02625 9db9bae64acfaf70b083609c9fbbc9a2 342 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 30 40 - T 11-11-2016 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 SHALO_RS02625 9db9bae64acfaf70b083609c9fbbc9a2 342 SUPERFAMILY SSF51419 7 231 1.6E-39 T 11-11-2016 IPR029066 PLP-binding barrel SHALO_RS02625 9db9bae64acfaf70b083609c9fbbc9a2 342 Gene3D G3DSA:2.40.37.10 213 342 3.8E-23 T 11-11-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 SHALO_RS02625 9db9bae64acfaf70b083609c9fbbc9a2 342 Pfam PF00842 Alanine racemase, C-terminal domain 233 340 3.4E-16 T 11-11-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 SHALO_RS02625 9db9bae64acfaf70b083609c9fbbc9a2 342 Gene3D G3DSA:3.20.20.10 11 212 5.3E-42 T 11-11-2016 IPR029066 PLP-binding barrel SHALO_RS02625 9db9bae64acfaf70b083609c9fbbc9a2 342 Pfam PF01168 Alanine racemase, N-terminal domain 7 216 1.4E-38 T 11-11-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 SHALO_RS02625 9db9bae64acfaf70b083609c9fbbc9a2 342 SMART SM01005 230 342 1.4E-18 T 11-11-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 SHALO_RS06950 82ba213a120c08ed6e4fa165eb6c5d54 409 SUPERFAMILY SSF51556 52 360 9.18E-61 T 11-11-2016 IPR032466 Metal-dependent hydrolase SHALO_RS06950 82ba213a120c08ed6e4fa165eb6c5d54 409 SUPERFAMILY SSF51338 360 407 1.62E-25 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SHALO_RS06950 82ba213a120c08ed6e4fa165eb6c5d54 409 SUPERFAMILY SSF51338 1 51 1.62E-25 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SHALO_RS06950 82ba213a120c08ed6e4fa165eb6c5d54 409 Gene3D G3DSA:3.20.20.140 60 380 2.7E-66 T 11-11-2016 SHALO_RS06950 82ba213a120c08ed6e4fa165eb6c5d54 409 Pfam PF01979 Amidohydrolase family 48 406 2.9E-18 T 11-11-2016 IPR006680 Amidohydrolase-related GO:0016787 SHALO_RS06950 82ba213a120c08ed6e4fa165eb6c5d54 409 Gene3D G3DSA:2.30.40.10 1 59 6.2E-18 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SHALO_RS06950 82ba213a120c08ed6e4fa165eb6c5d54 409 Pfam PF00449 Urease alpha-subunit, N-terminal domain 2 41 1.2E-4 T 11-11-2016 IPR011612 Urease alpha-subunit, N-terminal domain KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 SHALO_RS04080 4ce985cf71fa7b3aca3b9c4be1ec4521 187 SMART SM00841 131 185 1.3E-26 T 11-11-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 SHALO_RS04080 4ce985cf71fa7b3aca3b9c4be1ec4521 187 Gene3D G3DSA:2.30.30.30 5 64 1.2E-28 T 11-11-2016 IPR014722 Ribosomal protein L2 domain 2 SHALO_RS04080 4ce985cf71fa7b3aca3b9c4be1ec4521 187 Gene3D G3DSA:2.40.50.140 66 129 1.0E-23 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold SHALO_RS04080 4ce985cf71fa7b3aca3b9c4be1ec4521 187 SUPERFAMILY SSF50249 130 186 3.64E-14 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold SHALO_RS04080 4ce985cf71fa7b3aca3b9c4be1ec4521 187 Pfam PF09285 Elongation factor P, C-terminal 131 185 3.4E-21 T 11-11-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 SHALO_RS04080 4ce985cf71fa7b3aca3b9c4be1ec4521 187 SUPERFAMILY SSF50249 67 131 2.14E-17 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold SHALO_RS04080 4ce985cf71fa7b3aca3b9c4be1ec4521 187 SUPERFAMILY SSF50104 2 65 3.36E-21 T 11-11-2016 IPR008991 Translation protein SH3-like domain SHALO_RS04080 4ce985cf71fa7b3aca3b9c4be1ec4521 187 TIGRFAM TIGR00038 efp: translation elongation factor P 6 186 1.5E-70 T 11-11-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 SHALO_RS04080 4ce985cf71fa7b3aca3b9c4be1ec4521 187 Hamap MF_00141 Elongation factor P [efp]. 3 186 46.398 T 11-11-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 SHALO_RS04080 4ce985cf71fa7b3aca3b9c4be1ec4521 187 ProSitePatterns PS01275 Elongation factor P signature. 151 170 - T 11-11-2016 IPR013852 Translation elongation factor P/YeiP, conserved site SHALO_RS04080 4ce985cf71fa7b3aca3b9c4be1ec4521 187 Pfam PF01132 Elongation factor P (EF-P) OB domain 72 123 4.5E-21 T 11-11-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 SHALO_RS04080 4ce985cf71fa7b3aca3b9c4be1ec4521 187 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 7 61 1.5E-25 T 11-11-2016 IPR013185 Translation elongation factor, KOW-like SHALO_RS04080 4ce985cf71fa7b3aca3b9c4be1ec4521 187 SMART SM01185 69 123 1.1E-23 T 11-11-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 SHALO_RS04080 4ce985cf71fa7b3aca3b9c4be1ec4521 187 Gene3D G3DSA:2.40.50.140 130 186 6.4E-22 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold SHALO_RS04080 4ce985cf71fa7b3aca3b9c4be1ec4521 187 PIRSF PIRSF005901 2 187 5.4E-60 T 11-11-2016 IPR020599 Translation elongation factor P/YeiP SHALO_RS00890 a3240e15177f01d005d3adf8d0d9110b 294 SUPERFAMILY SSF53807 21 293 2.89E-78 T 11-11-2016 SHALO_RS00890 a3240e15177f01d005d3adf8d0d9110b 294 Gene3D G3DSA:3.40.50.1980 194 294 3.7E-31 T 11-11-2016 SHALO_RS00890 a3240e15177f01d005d3adf8d0d9110b 294 Pfam PF01297 Zinc-uptake complex component A periplasmic 22 274 1.5E-60 T 11-11-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 SHALO_RS00890 a3240e15177f01d005d3adf8d0d9110b 294 Gene3D G3DSA:3.40.50.1980 21 192 3.7E-47 T 11-11-2016 SHALO_RS08785 7be347351de3806eef7ff097a68328f3 445 Gene3D G3DSA:3.30.1360.120 2 118 1.5E-42 T 11-11-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 SHALO_RS08785 7be347351de3806eef7ff097a68328f3 445 SUPERFAMILY SSF52540 69 149 2.12E-39 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS08785 7be347351de3806eef7ff097a68328f3 445 SUPERFAMILY SSF52540 185 347 2.12E-39 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS08785 7be347351de3806eef7ff097a68328f3 445 SUPERFAMILY SSF103025 2 117 2.04E-41 T 11-11-2016 SHALO_RS08785 7be347351de3806eef7ff097a68328f3 445 Pfam PF01926 50S ribosome-binding GTPase 215 332 3.3E-25 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 SHALO_RS08785 7be347351de3806eef7ff097a68328f3 445 Gene3D G3DSA:3.40.50.300 283 344 7.2E-7 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS08785 7be347351de3806eef7ff097a68328f3 445 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 283 301 3.5E-5 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 SHALO_RS08785 7be347351de3806eef7ff097a68328f3 445 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 216 236 3.5E-5 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 SHALO_RS08785 7be347351de3806eef7ff097a68328f3 445 Pfam PF12631 MnmE helical domain 120 442 9.4E-40 T 11-11-2016 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 SHALO_RS08785 7be347351de3806eef7ff097a68328f3 445 Pfam PF10396 GTP-binding protein TrmE N-terminus 3 117 1.6E-38 T 11-11-2016 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 SHALO_RS08785 7be347351de3806eef7ff097a68328f3 445 Gene3D G3DSA:1.20.120.430 245 268 4.6E-43 T 11-11-2016 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 SHALO_RS08785 7be347351de3806eef7ff097a68328f3 445 Gene3D G3DSA:1.20.120.430 376 445 4.6E-43 T 11-11-2016 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 SHALO_RS08785 7be347351de3806eef7ff097a68328f3 445 Gene3D G3DSA:1.20.120.430 119 179 4.6E-43 T 11-11-2016 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 SHALO_RS08785 7be347351de3806eef7ff097a68328f3 445 Gene3D G3DSA:3.40.50.300 211 244 2.6E-6 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS08785 7be347351de3806eef7ff097a68328f3 445 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 211 342 3.9E-24 T 11-11-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SHALO_RS08785 7be347351de3806eef7ff097a68328f3 445 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 8 445 1.5E-118 T 11-11-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 SHALO_RS08785 7be347351de3806eef7ff097a68328f3 445 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 2 445 30.576 T 11-11-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 SHALO_RS15105 bcdc2c0e3f688d93a870a55bf2954829 202 SUPERFAMILY SSF53271 6 150 2.35E-38 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like SHALO_RS15105 bcdc2c0e3f688d93a870a55bf2954829 202 Pfam PF00156 Phosphoribosyl transferase domain 40 146 1.2E-9 T 11-11-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 SHALO_RS15105 bcdc2c0e3f688d93a870a55bf2954829 202 Gene3D G3DSA:3.40.50.2020 3 200 1.4E-44 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like SHALO_RS15105 bcdc2c0e3f688d93a870a55bf2954829 202 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 202 24.893 T 11-11-2016 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|Reactome: R-HSA-500753 SHALO_RS15105 bcdc2c0e3f688d93a870a55bf2954829 202 TIGRFAM TIGR01367 pyrE_Therm: orotate phosphoribosyltransferase 3 200 1.7E-77 T 11-11-2016 IPR006273 Orotate phosphoribosyltransferase, bacterial GO:0004588|GO:0019856 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686 SHALO_RS07110 57e685e3bc36d63ec2b04179d749905b 374 TIGRFAM TIGR00075 hypD: hydrogenase expression/formation protein HypD 1 367 3.3E-152 T 11-11-2016 IPR002780 Hydrogenase formation HypD protein GO:0046872 SHALO_RS07110 57e685e3bc36d63ec2b04179d749905b 374 Pfam PF01924 Hydrogenase formation hypA family 16 365 3.5E-153 T 11-11-2016 IPR002780 Hydrogenase formation HypD protein GO:0046872 SHALO_RS07110 57e685e3bc36d63ec2b04179d749905b 374 PIRSF PIRSF005622 4 370 9.9E-163 T 11-11-2016 IPR002780 Hydrogenase formation HypD protein GO:0046872 SHALO_RS13050 301f7b51482375d8439e76753fd7d723 476 TIGRFAM TIGR00839 aspA: aspartate ammonia-lyase 4 463 1.8E-228 T 11-11-2016 IPR004708 Aspartate ammonia-lyase GO:0006531|GO:0008797 KEGG: 00250+4.3.1.1 SHALO_RS13050 301f7b51482375d8439e76753fd7d723 476 Pfam PF00206 Lyase 17 342 3.4E-104 T 11-11-2016 IPR022761 Fumarate lyase, N-terminal SHALO_RS13050 301f7b51482375d8439e76753fd7d723 476 PRINTS PR00145 Argininosuccinate lyase family signature 134 156 1.7E-6 T 11-11-2016 SHALO_RS13050 301f7b51482375d8439e76753fd7d723 476 PRINTS PR00145 Argininosuccinate lyase family signature 317 333 1.7E-6 T 11-11-2016 SHALO_RS13050 301f7b51482375d8439e76753fd7d723 476 PRINTS PR00145 Argininosuccinate lyase family signature 175 195 1.7E-6 T 11-11-2016 SHALO_RS13050 301f7b51482375d8439e76753fd7d723 476 ProSitePatterns PS00163 Fumarate lyases signature. 317 326 - T 11-11-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 SHALO_RS13050 301f7b51482375d8439e76753fd7d723 476 SUPERFAMILY SSF48557 3 460 1.15E-144 T 11-11-2016 IPR008948 L-Aspartase-like GO:0003824 SHALO_RS13050 301f7b51482375d8439e76753fd7d723 476 Gene3D G3DSA:1.10.40.30 408 463 2.9E-22 T 11-11-2016 SHALO_RS13050 301f7b51482375d8439e76753fd7d723 476 Gene3D G3DSA:1.10.275.10 3 139 2.2E-53 T 11-11-2016 IPR024083 Fumarase/histidase, N-terminal SHALO_RS13050 301f7b51482375d8439e76753fd7d723 476 PRINTS PR00149 Fumarate lyase superfamily signature 135 153 3.5E-29 T 11-11-2016 IPR000362 Fumarate lyase family SHALO_RS13050 301f7b51482375d8439e76753fd7d723 476 PRINTS PR00149 Fumarate lyase superfamily signature 271 298 3.5E-29 T 11-11-2016 IPR000362 Fumarate lyase family SHALO_RS13050 301f7b51482375d8439e76753fd7d723 476 PRINTS PR00149 Fumarate lyase superfamily signature 180 198 3.5E-29 T 11-11-2016 IPR000362 Fumarate lyase family SHALO_RS13050 301f7b51482375d8439e76753fd7d723 476 PRINTS PR00149 Fumarate lyase superfamily signature 317 333 3.5E-29 T 11-11-2016 IPR000362 Fumarate lyase family SHALO_RS13050 301f7b51482375d8439e76753fd7d723 476 Pfam PF10415 Fumarase C C-terminus 408 460 1.7E-20 T 11-11-2016 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 SHALO_RS13050 301f7b51482375d8439e76753fd7d723 476 Gene3D G3DSA:1.20.200.10 140 401 3.7E-88 T 11-11-2016 SHALO_RS04345 b88c8be8aef83ec5c97f713ee10fd57d 266 PIRSF PIRSF005902 1 260 7.5E-77 T 11-11-2016 IPR001130 TatD family GO:0016788 SHALO_RS04345 b88c8be8aef83ec5c97f713ee10fd57d 266 Pfam PF01026 TatD related DNase 3 256 1.9E-71 T 11-11-2016 IPR001130 TatD family GO:0016788 SHALO_RS04345 b88c8be8aef83ec5c97f713ee10fd57d 266 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 128 138 - T 11-11-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 SHALO_RS04345 b88c8be8aef83ec5c97f713ee10fd57d 266 SUPERFAMILY SSF51556 2 256 1.01E-80 T 11-11-2016 IPR032466 Metal-dependent hydrolase SHALO_RS04345 b88c8be8aef83ec5c97f713ee10fd57d 266 Gene3D G3DSA:3.20.20.140 1 256 1.3E-82 T 11-11-2016 SHALO_RS04345 b88c8be8aef83ec5c97f713ee10fd57d 266 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 192 208 - T 11-11-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 SHALO_RS04345 b88c8be8aef83ec5c97f713ee10fd57d 266 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 256 2.5E-80 T 11-11-2016 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 SHALO_RS04345 b88c8be8aef83ec5c97f713ee10fd57d 266 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 11-11-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 SHALO_RS07105 5c8dc60e7675a65b8c8808c7bf12d2d7 89 TIGRFAM TIGR00074 hypC_hupF: hydrogenase assembly chaperone HypC/HupF 1 78 1.8E-26 T 11-11-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC SHALO_RS07105 5c8dc60e7675a65b8c8808c7bf12d2d7 89 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 18 34 1.1E-13 T 11-11-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC SHALO_RS07105 5c8dc60e7675a65b8c8808c7bf12d2d7 89 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 40 56 1.1E-13 T 11-11-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC SHALO_RS07105 5c8dc60e7675a65b8c8808c7bf12d2d7 89 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 58 70 1.1E-13 T 11-11-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC SHALO_RS07105 5c8dc60e7675a65b8c8808c7bf12d2d7 89 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 2 9 1.1E-13 T 11-11-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC SHALO_RS07105 5c8dc60e7675a65b8c8808c7bf12d2d7 89 SUPERFAMILY SSF159127 1 78 1.18E-25 T 11-11-2016 SHALO_RS07105 5c8dc60e7675a65b8c8808c7bf12d2d7 89 Pfam PF01455 HupF/HypC family 1 66 7.4E-26 T 11-11-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC SHALO_RS09600 eb1fddefe7906f329120a554abff4742 254 Gene3D G3DSA:3.60.10.10 1 253 2.0E-88 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase SHALO_RS09600 eb1fddefe7906f329120a554abff4742 254 ProSitePatterns PS00727 AP endonucleases family 1 signature 2. 187 203 - T 11-11-2016 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Reactome: R-HSA-110357|Reactome: R-HSA-110362|Reactome: R-HSA-110373|Reactome: R-HSA-5651801|Reactome: R-HSA-73930|Reactome: R-HSA-73933 SHALO_RS09600 eb1fddefe7906f329120a554abff4742 254 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 252 3.7E-80 T 11-11-2016 SHALO_RS09600 eb1fddefe7906f329120a554abff4742 254 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 28 37 - T 11-11-2016 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 SHALO_RS09600 eb1fddefe7906f329120a554abff4742 254 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 245 1.5E-28 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase SHALO_RS09600 eb1fddefe7906f329120a554abff4742 254 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 253 1.4E-83 T 11-11-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 SHALO_RS09600 eb1fddefe7906f329120a554abff4742 254 SUPERFAMILY SSF56219 1 254 9.55E-73 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase SHALO_RS03990 d4b511c86db1a01866283ea8f4618ac6 81 TIGRFAM TIGR01195 oadG_fam: sodium pump decarboxylases, gamma subunit 5 79 7.3E-10 T 11-11-2016 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0071436 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 SHALO_RS03990 d4b511c86db1a01866283ea8f4618ac6 81 Pfam PF04277 Oxaloacetate decarboxylase, gamma chain 8 75 1.9E-11 T 11-11-2016 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0071436 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 SHALO_RS04940 b259791c2ffe84a11dac49683c1b82ff 283 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 156 1.3E-32 T 11-11-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 SHALO_RS04940 b259791c2ffe84a11dac49683c1b82ff 283 PIRSF PIRSF000103 1 283 1.9E-72 T 11-11-2016 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 SHALO_RS04940 b259791c2ffe84a11dac49683c1b82ff 283 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 162 280 1.9E-22 T 11-11-2016 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 SHALO_RS04940 b259791c2ffe84a11dac49683c1b82ff 283 Gene3D G3DSA:1.10.1040.10 161 282 2.2E-29 T 11-11-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 SHALO_RS04940 b259791c2ffe84a11dac49683c1b82ff 283 Gene3D G3DSA:3.40.50.720 1 157 1.6E-38 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS04940 b259791c2ffe84a11dac49683c1b82ff 283 SUPERFAMILY SSF51735 1 159 6.54E-36 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS04940 b259791c2ffe84a11dac49683c1b82ff 283 SUPERFAMILY SSF48179 159 282 7.14E-27 T 11-11-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SHALO_RS01535 1c06fe66fdd40db424b5013f2586dd12 331 SUPERFAMILY SSF46626 57 170 6.36E-22 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS01535 1c06fe66fdd40db424b5013f2586dd12 331 Gene3D G3DSA:1.10.760.10 50 168 1.8E-31 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS01535 1c06fe66fdd40db424b5013f2586dd12 331 Pfam PF00034 Cytochrome c 194 279 3.5E-9 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS01535 1c06fe66fdd40db424b5013f2586dd12 331 Gene3D G3DSA:1.10.760.10 208 289 6.6E-14 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS01535 1c06fe66fdd40db424b5013f2586dd12 331 SUPERFAMILY SSF46626 185 283 1.86E-18 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS01535 1c06fe66fdd40db424b5013f2586dd12 331 Gene3D G3DSA:1.10.710.10 169 207 5.5E-4 T 11-11-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 SHALO_RS12765 59a192598a898fbcd9e43d31f1dad041 274 SMART SM00382 27 223 4.6E-15 T 11-11-2016 IPR003593 AAA+ ATPase domain SHALO_RS12765 59a192598a898fbcd9e43d31f1dad041 274 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHALO_RS12765 59a192598a898fbcd9e43d31f1dad041 274 TIGRFAM TIGR02315 ABC_phnC: phosphonate ABC transporter, ATP-binding protein 1 243 6.0E-100 T 11-11-2016 IPR012693 ABC transporter, phosphonate import, PhnC GO:0005524|GO:0015416|GO:0015716|GO:0016020 SHALO_RS12765 59a192598a898fbcd9e43d31f1dad041 274 SUPERFAMILY SSF52540 2 235 8.95E-67 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS12765 59a192598a898fbcd9e43d31f1dad041 274 Gene3D G3DSA:3.40.50.300 1 235 5.7E-74 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS12765 59a192598a898fbcd9e43d31f1dad041 274 Pfam PF00005 ABC transporter 18 174 3.0E-38 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_RS03860 9aaa967bcb983417698f58034779ea3a 423 Gene3D G3DSA:3.40.50.20 2 90 2.3E-28 T 11-11-2016 IPR016185 Pre-ATP-grasp domain SHALO_RS03860 9aaa967bcb983417698f58034779ea3a 423 SUPERFAMILY SSF56059 100 318 6.19E-58 T 11-11-2016 SHALO_RS03860 9aaa967bcb983417698f58034779ea3a 423 Gene3D G3DSA:3.90.600.10 326 419 1.5E-22 T 11-11-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 SHALO_RS03860 9aaa967bcb983417698f58034779ea3a 423 Gene3D G3DSA:3.30.470.20 187 321 5.4E-54 T 11-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SHALO_RS03860 9aaa967bcb983417698f58034779ea3a 423 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 420 1.8E-147 T 11-11-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 SHALO_RS03860 9aaa967bcb983417698f58034779ea3a 423 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 420 39.197 T 11-11-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 SHALO_RS03860 9aaa967bcb983417698f58034779ea3a 423 SMART SM01210 325 420 6.9E-33 T 11-11-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 SHALO_RS03860 9aaa967bcb983417698f58034779ea3a 423 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 285 292 - T 11-11-2016 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 SHALO_RS03860 9aaa967bcb983417698f58034779ea3a 423 SUPERFAMILY SSF51246 323 420 7.46E-24 T 11-11-2016 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780|Reactome: R-HSA-3371599 SHALO_RS03860 9aaa967bcb983417698f58034779ea3a 423 Gene3D G3DSA:3.30.1490.20 120 186 6.9E-26 T 11-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SHALO_RS03860 9aaa967bcb983417698f58034779ea3a 423 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 99 291 8.2E-76 T 11-11-2016 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 SHALO_RS03860 9aaa967bcb983417698f58034779ea3a 423 SUPERFAMILY SSF52440 1 99 2.73E-28 T 11-11-2016 IPR016185 Pre-ATP-grasp domain SHALO_RS03860 9aaa967bcb983417698f58034779ea3a 423 SMART SM01209 99 291 1.5E-123 T 11-11-2016 SHALO_RS03860 9aaa967bcb983417698f58034779ea3a 423 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 326 417 2.1E-18 T 11-11-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 SHALO_RS03860 9aaa967bcb983417698f58034779ea3a 423 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 98 7.6E-30 T 11-11-2016 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 SHALO_RS12110 df4c8ab1af410563317865d2e7ab991a 130 PIRSF PIRSF002131 1 130 4.5E-47 T 11-11-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 SHALO_RS12110 df4c8ab1af410563317865d2e7ab991a 130 Gene3D G3DSA:3.30.420.80 9 130 5.7E-49 T 11-11-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 SHALO_RS12110 df4c8ab1af410563317865d2e7ab991a 130 Pfam PF00411 Ribosomal protein S11 19 129 2.0E-42 T 11-11-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 SHALO_RS12110 df4c8ab1af410563317865d2e7ab991a 130 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 12 127 2.0E-52 T 11-11-2016 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_RS12110 df4c8ab1af410563317865d2e7ab991a 130 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 130 32.323 T 11-11-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 SHALO_RS12110 df4c8ab1af410563317865d2e7ab991a 130 SUPERFAMILY SSF53137 13 130 7.85E-43 T 11-11-2016 SHALO_RS14795 9b259350dfed6b30466ff4b0d0ef3bb7 443 Pfam PF01235 Sodium:alanine symporter family 51 442 1.9E-143 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SHALO_RS14795 9b259350dfed6b30466ff4b0d0ef3bb7 443 TIGRFAM TIGR00835 agcS: amino acid carrier protein 16 438 2.9E-162 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SHALO_RS14795 9b259350dfed6b30466ff4b0d0ef3bb7 443 PRINTS PR00175 Sodium/alanine symporter signature 209 228 1.5E-56 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SHALO_RS14795 9b259350dfed6b30466ff4b0d0ef3bb7 443 PRINTS PR00175 Sodium/alanine symporter signature 348 370 1.5E-56 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SHALO_RS14795 9b259350dfed6b30466ff4b0d0ef3bb7 443 PRINTS PR00175 Sodium/alanine symporter signature 304 322 1.5E-56 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SHALO_RS14795 9b259350dfed6b30466ff4b0d0ef3bb7 443 PRINTS PR00175 Sodium/alanine symporter signature 181 199 1.5E-56 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SHALO_RS14795 9b259350dfed6b30466ff4b0d0ef3bb7 443 PRINTS PR00175 Sodium/alanine symporter signature 90 112 1.5E-56 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SHALO_RS14795 9b259350dfed6b30466ff4b0d0ef3bb7 443 PRINTS PR00175 Sodium/alanine symporter signature 407 427 1.5E-56 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SHALO_RS14675 e745181a7191a52b4c79b4caf57c2d13 464 Gene3D G3DSA:3.40.50.620 308 456 5.0E-72 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHALO_RS14675 e745181a7191a52b4c79b4caf57c2d13 464 Gene3D G3DSA:3.40.50.620 102 257 5.0E-72 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHALO_RS14675 e745181a7191a52b4c79b4caf57c2d13 464 Gene3D G3DSA:3.60.20.10 1 101 3.0E-25 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SHALO_RS14675 e745181a7191a52b4c79b4caf57c2d13 464 SUPERFAMILY SSF56235 1 102 1.72E-19 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SHALO_RS14675 e745181a7191a52b4c79b4caf57c2d13 464 PIRSF PIRSF001589 1 462 9.5E-104 T 11-11-2016 SHALO_RS14675 e745181a7191a52b4c79b4caf57c2d13 464 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 1 393 1.0E-84 T 11-11-2016 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 SHALO_RS14675 e745181a7191a52b4c79b4caf57c2d13 464 Pfam PF13537 Glutamine amidotransferase domain 1 45 1.3E-12 T 11-11-2016 IPR017932 Glutamine amidotransferase type 2 domain SHALO_RS14675 e745181a7191a52b4c79b4caf57c2d13 464 Pfam PF00733 Asparagine synthase 120 456 2.5E-71 T 11-11-2016 IPR001962 Asparagine synthase GO:0004066|GO:0006529 SHALO_RS14675 e745181a7191a52b4c79b4caf57c2d13 464 SUPERFAMILY SSF52402 313 448 2.71E-58 T 11-11-2016 SHALO_RS14675 e745181a7191a52b4c79b4caf57c2d13 464 SUPERFAMILY SSF52402 110 261 2.71E-58 T 11-11-2016 SHALO_RS12105 abd06fbe5323b812b5151a97a7004ca5 208 SMART SM01390 3 97 4.2E-45 T 11-11-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 SHALO_RS12105 abd06fbe5323b812b5151a97a7004ca5 208 Gene3D G3DSA:3.10.290.10 105 193 1.2E-30 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 SHALO_RS12105 abd06fbe5323b812b5151a97a7004ca5 208 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 208 1.0E-82 T 11-11-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 SHALO_RS12105 abd06fbe5323b812b5151a97a7004ca5 208 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 208 36.133 T 11-11-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 SHALO_RS12105 abd06fbe5323b812b5151a97a7004ca5 208 SUPERFAMILY SSF55174 2 208 1.57E-69 T 11-11-2016 SHALO_RS12105 abd06fbe5323b812b5151a97a7004ca5 208 ProSitePatterns PS00632 Ribosomal protein S4 signature. 96 120 - T 11-11-2016 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_RS12105 abd06fbe5323b812b5151a97a7004ca5 208 Gene3D G3DSA:1.10.1050.10 1 104 4.5E-41 T 11-11-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 SHALO_RS12105 abd06fbe5323b812b5151a97a7004ca5 208 Pfam PF01479 S4 domain 98 145 6.0E-20 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 SHALO_RS12105 abd06fbe5323b812b5151a97a7004ca5 208 SMART SM00363 98 162 7.2E-19 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 SHALO_RS12105 abd06fbe5323b812b5151a97a7004ca5 208 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 97 8.0E-26 T 11-11-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 SHALO_RS08015 7222f15e67320be3a40feddcc42975ec 225 Pfam PF02361 Cobalt transport protein 21 191 4.4E-12 T 11-11-2016 IPR003339 ABC/ECF transporter, transmembrane component SHALO_RS00435 67b4d130917d237c90222661d68282ba 559 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 14 556 1.5E-229 T 11-11-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 SHALO_RS00435 67b4d130917d237c90222661d68282ba 559 SUPERFAMILY SSF52016 377 556 1.18E-57 T 11-11-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel SHALO_RS00435 67b4d130917d237c90222661d68282ba 559 Pfam PF00920 Dehydratase family 31 553 2.8E-216 T 11-11-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 SHALO_RS00435 67b4d130917d237c90222661d68282ba 559 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 1 556 44.649 T 11-11-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 SHALO_RS00435 67b4d130917d237c90222661d68282ba 559 SUPERFAMILY SSF143975 1 376 2.09E-134 T 11-11-2016 SHALO_RS00435 67b4d130917d237c90222661d68282ba 559 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 464 475 - T 11-11-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 SHALO_RS00435 67b4d130917d237c90222661d68282ba 559 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 119 129 - T 11-11-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 SHALO_RS02995 ef10c3d53966800269144fc6e8c576ae 413 SMART SM00382 165 323 5.9E-8 T 11-11-2016 IPR003593 AAA+ ATPase domain SHALO_RS02995 ef10c3d53966800269144fc6e8c576ae 413 SUPERFAMILY SSF50249 47 120 2.63E-23 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold SHALO_RS02995 ef10c3d53966800269144fc6e8c576ae 413 Gene3D G3DSA:1.10.720.10 2 45 2.7E-16 T 11-11-2016 SHALO_RS02995 ef10c3d53966800269144fc6e8c576ae 413 SUPERFAMILY SSF52540 89 366 7.4E-65 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS02995 ef10c3d53966800269144fc6e8c576ae 413 SUPERFAMILY SSF68912 2 45 4.71E-9 T 11-11-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 SHALO_RS02995 ef10c3d53966800269144fc6e8c576ae 413 Pfam PF07498 Rho termination factor, N-terminal domain 4 45 2.7E-15 T 11-11-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 SHALO_RS02995 ef10c3d53966800269144fc6e8c576ae 413 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 413 217.842 T 11-11-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 SHALO_RS02995 ef10c3d53966800269144fc6e8c576ae 413 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 155 358 3.3E-21 T 11-11-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SHALO_RS02995 ef10c3d53966800269144fc6e8c576ae 413 Gene3D G3DSA:3.40.50.300 129 411 9.1E-97 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS02995 ef10c3d53966800269144fc6e8c576ae 413 Gene3D G3DSA:2.40.50.140 47 115 9.3E-29 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold SHALO_RS02995 ef10c3d53966800269144fc6e8c576ae 413 SMART SM00959 3 45 1.5E-14 T 11-11-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 SHALO_RS02995 ef10c3d53966800269144fc6e8c576ae 413 Pfam PF07497 Rho termination factor, RNA-binding domain 50 120 3.4E-27 T 11-11-2016 IPR011113 Rho termination factor, RNA-binding GO:0003723|GO:0006353 SHALO_RS02995 ef10c3d53966800269144fc6e8c576ae 413 SMART SM00357 50 116 1.5E-11 T 11-11-2016 IPR011129 Cold shock protein GO:0003676 SHALO_RS02995 ef10c3d53966800269144fc6e8c576ae 413 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 412 9.3E-202 T 11-11-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 SHALO_RS11015 82c6fe2e74fb166e10bd0014df69bb75 484 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 466 3.3E-144 T 11-11-2016 IPR016484 GTP-binding protein EngA GO:0005525 SHALO_RS11015 82c6fe2e74fb166e10bd0014df69bb75 484 SUPERFAMILY SSF52540 190 469 3.23E-53 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS11015 82c6fe2e74fb166e10bd0014df69bb75 484 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 88 2.7E-6 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 SHALO_RS11015 82c6fe2e74fb166e10bd0014df69bb75 484 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 4 24 2.7E-6 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 SHALO_RS11015 82c6fe2e74fb166e10bd0014df69bb75 484 Gene3D G3DSA:3.30.300.20 394 470 8.4E-29 T 11-11-2016 IPR015946 K homology domain-like, alpha/beta SHALO_RS11015 82c6fe2e74fb166e10bd0014df69bb75 484 PIRSF PIRSF006485 1 476 2.3E-141 T 11-11-2016 IPR016484 GTP-binding protein EngA GO:0005525 SHALO_RS11015 82c6fe2e74fb166e10bd0014df69bb75 484 Pfam PF01926 50S ribosome-binding GTPase 216 333 2.7E-23 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 SHALO_RS11015 82c6fe2e74fb166e10bd0014df69bb75 484 Pfam PF01926 50S ribosome-binding GTPase 3 117 5.9E-22 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 SHALO_RS11015 82c6fe2e74fb166e10bd0014df69bb75 484 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 2 153 8.2E-26 T 11-11-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SHALO_RS11015 82c6fe2e74fb166e10bd0014df69bb75 484 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 213 378 1.6E-26 T 11-11-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SHALO_RS11015 82c6fe2e74fb166e10bd0014df69bb75 484 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 389 466 2.9E-26 T 11-11-2016 IPR032859 GTPase Der, C-terminal KH-domain-like SHALO_RS11015 82c6fe2e74fb166e10bd0014df69bb75 484 Gene3D G3DSA:3.40.50.300 3 169 5.4E-38 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS11015 82c6fe2e74fb166e10bd0014df69bb75 484 Gene3D G3DSA:3.40.50.300 211 393 6.6E-49 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS11015 82c6fe2e74fb166e10bd0014df69bb75 484 SUPERFAMILY SSF52540 3 166 2.4E-37 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS11015 82c6fe2e74fb166e10bd0014df69bb75 484 Hamap MF_00195 GTPase Der [der]. 1 471 32.19 T 11-11-2016 IPR016484 GTP-binding protein EngA GO:0005525 SHALO_RS13520 2e0d18ae807696f06f00be53eb87c718 319 SUPERFAMILY SSF54292 2 105 2.49E-18 T 11-11-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 SHALO_RS13520 2e0d18ae807696f06f00be53eb87c718 319 Gene3D G3DSA:3.10.20.30 1 105 3.1E-24 T 11-11-2016 IPR012675 Beta-grasp domain SHALO_RS13520 2e0d18ae807696f06f00be53eb87c718 319 Pfam PF13183 4Fe-4S dicluster domain 147 218 2.6E-7 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_RS13520 2e0d18ae807696f06f00be53eb87c718 319 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 5 227 1.9E-49 T 11-11-2016 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_RS13520 2e0d18ae807696f06f00be53eb87c718 319 Gene3D G3DSA:1.10.1060.10 106 234 1.3E-21 T 11-11-2016 SHALO_RS13520 2e0d18ae807696f06f00be53eb87c718 319 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 3 110 5.0E-25 T 11-11-2016 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_RS13520 2e0d18ae807696f06f00be53eb87c718 319 SUPERFAMILY SSF46548 107 235 4.71E-23 T 11-11-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 SHALO_RS14955 19a6743d6237e3e0eceaefbc9bcbe779 939 Gene3D G3DSA:3.40.50.740 111 189 3.6E-26 T 11-11-2016 SHALO_RS14955 19a6743d6237e3e0eceaefbc9bcbe779 939 Gene3D G3DSA:3.40.50.740 455 482 3.6E-26 T 11-11-2016 SHALO_RS14955 19a6743d6237e3e0eceaefbc9bcbe779 939 Gene3D G3DSA:3.40.50.740 523 683 3.6E-26 T 11-11-2016 SHALO_RS14955 19a6743d6237e3e0eceaefbc9bcbe779 939 SUPERFAMILY SSF53706 27 645 1.15E-108 T 11-11-2016 SHALO_RS14955 19a6743d6237e3e0eceaefbc9bcbe779 939 Pfam PF01568 Molydopterin dinucleotide binding domain 805 901 1.2E-13 T 11-11-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 SHALO_RS14955 19a6743d6237e3e0eceaefbc9bcbe779 939 Gene3D G3DSA:3.40.228.10 389 454 2.9E-45 T 11-11-2016 SHALO_RS14955 19a6743d6237e3e0eceaefbc9bcbe779 939 Gene3D G3DSA:3.40.228.10 198 301 2.9E-45 T 11-11-2016 SHALO_RS14955 19a6743d6237e3e0eceaefbc9bcbe779 939 SUPERFAMILY SSF50692 800 937 1.47E-24 T 11-11-2016 IPR009010 Aspartate decarboxylase-like domain SHALO_RS14955 19a6743d6237e3e0eceaefbc9bcbe779 939 Gene3D G3DSA:2.40.40.20 781 938 8.1E-24 T 11-11-2016 SHALO_RS14955 19a6743d6237e3e0eceaefbc9bcbe779 939 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 843 870 - T 11-11-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 SHALO_RS14955 19a6743d6237e3e0eceaefbc9bcbe779 939 Gene3D G3DSA:2.20.25.90 55 100 7.3E-20 T 11-11-2016 SHALO_RS14955 19a6743d6237e3e0eceaefbc9bcbe779 939 Pfam PF00384 Molybdopterin oxidoreductase 111 651 6.4E-38 T 11-11-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS06940 f1f8687219c47da7a11372a365ebff37 299 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 154 289 1.8E-45 T 11-11-2016 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 SHALO_RS06940 f1f8687219c47da7a11372a365ebff37 299 Gene3D G3DSA:1.10.1040.10 158 298 7.4E-48 T 11-11-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 SHALO_RS06940 f1f8687219c47da7a11372a365ebff37 299 PIRSF PIRSF000114 32 299 1.5E-70 T 11-11-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 SHALO_RS06940 f1f8687219c47da7a11372a365ebff37 299 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 5 295 29.988 T 11-11-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 SHALO_RS06940 f1f8687219c47da7a11372a365ebff37 299 Gene3D G3DSA:3.40.50.720 44 157 1.9E-24 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS06940 f1f8687219c47da7a11372a365ebff37 299 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 43 134 5.1E-17 T 11-11-2016 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 SHALO_RS06940 f1f8687219c47da7a11372a365ebff37 299 SUPERFAMILY SSF48179 153 297 3.23E-46 T 11-11-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SHALO_RS06940 f1f8687219c47da7a11372a365ebff37 299 SUPERFAMILY SSF51735 6 143 1.81E-20 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS06940 f1f8687219c47da7a11372a365ebff37 299 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 162 183 - T 11-11-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 SHALO_RS08490 7b26664eaca168f5b066c1d7bb78b764 876 TIGRFAM TIGR00422 valS: valine--tRNA ligase 6 855 0.0 T 11-11-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 SHALO_RS08490 7b26664eaca168f5b066c1d7bb78b764 876 SUPERFAMILY SSF52374 345 586 2.13E-129 T 11-11-2016 SHALO_RS08490 7b26664eaca168f5b066c1d7bb78b764 876 SUPERFAMILY SSF52374 5 197 2.13E-129 T 11-11-2016 SHALO_RS08490 7b26664eaca168f5b066c1d7bb78b764 876 Pfam PF08264 Anticodon-binding domain of tRNA 620 752 1.5E-27 T 11-11-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 SHALO_RS08490 7b26664eaca168f5b066c1d7bb78b764 876 Gene3D G3DSA:3.90.740.10 199 341 5.7E-48 T 11-11-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 SHALO_RS08490 7b26664eaca168f5b066c1d7bb78b764 876 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 815 873 1.3E-12 T 11-11-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 SHALO_RS08490 7b26664eaca168f5b066c1d7bb78b764 876 SUPERFAMILY SSF50677 196 345 1.96E-59 T 11-11-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 SHALO_RS08490 7b26664eaca168f5b066c1d7bb78b764 876 Gene3D G3DSA:3.40.50.620 8 198 3.8E-134 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHALO_RS08490 7b26664eaca168f5b066c1d7bb78b764 876 Gene3D G3DSA:3.40.50.620 345 574 3.8E-134 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHALO_RS08490 7b26664eaca168f5b066c1d7bb78b764 876 SUPERFAMILY SSF47323 588 795 3.55E-42 T 11-11-2016 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 SHALO_RS08490 7b26664eaca168f5b066c1d7bb78b764 876 SUPERFAMILY SSF46589 810 873 5.23E-12 T 11-11-2016 IPR010978 tRNA-binding arm GO:0000166 SHALO_RS08490 7b26664eaca168f5b066c1d7bb78b764 876 PRINTS PR00986 Valyl-tRNA synthetase signature 448 469 1.3E-28 T 11-11-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 SHALO_RS08490 7b26664eaca168f5b066c1d7bb78b764 876 PRINTS PR00986 Valyl-tRNA synthetase signature 350 363 1.3E-28 T 11-11-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 SHALO_RS08490 7b26664eaca168f5b066c1d7bb78b764 876 PRINTS PR00986 Valyl-tRNA synthetase signature 235 252 1.3E-28 T 11-11-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 SHALO_RS08490 7b26664eaca168f5b066c1d7bb78b764 876 PRINTS PR00986 Valyl-tRNA synthetase signature 42 53 1.3E-28 T 11-11-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 SHALO_RS08490 7b26664eaca168f5b066c1d7bb78b764 876 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 17 576 1.8E-185 T 11-11-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 SHALO_RS08490 7b26664eaca168f5b066c1d7bb78b764 876 Gene3D G3DSA:1.10.730.10 577 745 2.7E-40 T 11-11-2016 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 SHALO_RS08490 7b26664eaca168f5b066c1d7bb78b764 876 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 49 60 - T 11-11-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 SHALO_RS08490 7b26664eaca168f5b066c1d7bb78b764 876 Hamap MF_02004 Valine--tRNA ligase [valS]. 1 875 14.741 T 11-11-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 SHALO_RS10205 bbc95136aa61452f997943ebbccc5b8f 180 SUPERFAMILY SSF50447 7 85 1.27E-9 T 11-11-2016 IPR009000 Translation protein, beta-barrel domain SHALO_RS10205 bbc95136aa61452f997943ebbccc5b8f 180 Gene3D G3DSA:2.40.30.60 1 83 3.6E-11 T 11-11-2016 IPR002676 RimM protein GO:0006364 SHALO_RS10205 bbc95136aa61452f997943ebbccc5b8f 180 Pfam PF01782 RimM N-terminal domain 9 84 2.6E-13 T 11-11-2016 IPR002676 RimM protein GO:0006364 SHALO_RS10205 bbc95136aa61452f997943ebbccc5b8f 180 SUPERFAMILY SSF50346 98 168 9.02E-10 T 11-11-2016 IPR011033 PRC-barrel-like SHALO_RS10205 bbc95136aa61452f997943ebbccc5b8f 180 Gene3D G3DSA:2.30.30.240 98 169 1.6E-11 T 11-11-2016 SHALO_RS10205 bbc95136aa61452f997943ebbccc5b8f 180 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 8 171 6.0E-31 T 11-11-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 SHALO_RS10205 bbc95136aa61452f997943ebbccc5b8f 180 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 7 176 17.733 T 11-11-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 SHALO_RS08500 3d44b2f876bad7c69c008972d8b64314 175 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 68 81 - T 11-11-2016 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 SHALO_RS08500 3d44b2f876bad7c69c008972d8b64314 175 Pfam PF00994 Probable molybdopterin binding domain 6 149 1.0E-31 T 11-11-2016 IPR001453 MoaB/Mog domain SHALO_RS08500 3d44b2f876bad7c69c008972d8b64314 175 SUPERFAMILY SSF53218 3 164 2.36E-46 T 11-11-2016 IPR001453 MoaB/Mog domain SHALO_RS08500 3d44b2f876bad7c69c008972d8b64314 175 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 3 146 5.0E-40 T 11-11-2016 IPR001453 MoaB/Mog domain SHALO_RS08500 3d44b2f876bad7c69c008972d8b64314 175 Gene3D G3DSA:3.40.980.10 3 162 5.4E-57 T 11-11-2016 IPR001453 MoaB/Mog domain SHALO_RS08500 3d44b2f876bad7c69c008972d8b64314 175 SMART SM00852 6 152 2.6E-27 T 11-11-2016 IPR001453 MoaB/Mog domain SHALO_RS07455 eb402da062b37ae9584c270498e42e2f 459 Gene3D G3DSA:3.30.450.20 150 272 1.4E-17 T 11-11-2016 SHALO_RS07455 eb402da062b37ae9584c270498e42e2f 459 Pfam PF00672 HAMP domain 278 347 1.5E-8 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SHALO_RS07455 eb402da062b37ae9584c270498e42e2f 459 SMART SM00304 297 351 3.3E-8 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SHALO_RS07455 eb402da062b37ae9584c270498e42e2f 459 Pfam PF02743 Cache domain 48 259 2.3E-16 T 11-11-2016 IPR033479 Double Cache domain 1 SHALO_RS07455 eb402da062b37ae9584c270498e42e2f 459 SUPERFAMILY SSF58104 319 436 3.4E-5 T 11-11-2016 SHALO_RS07420 046e890ff346ab7cf4e126b18b722122 143 Gene3D G3DSA:3.40.50.300 9 139 6.3E-26 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS07420 046e890ff346ab7cf4e126b18b722122 143 SUPERFAMILY SSF52540 28 106 5.32E-7 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS07420 046e890ff346ab7cf4e126b18b722122 143 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 10 116 1.2E-24 T 11-11-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 SHALO_RS07420 046e890ff346ab7cf4e126b18b722122 143 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 12 128 5.7E-23 T 11-11-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 SHALO_RS00010 b70f0d35e157f170865af625f09d59bc 355 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 241 353 2.9E-13 T 11-11-2016 IPR022635 DNA polymerase III, beta chain, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHALO_RS00010 b70f0d35e157f170865af625f09d59bc 355 Gene3D G3DSA:3.10.150.10 244 354 2.0E-17 T 11-11-2016 SHALO_RS00010 b70f0d35e157f170865af625f09d59bc 355 SMART SM00480 17 354 1.3E-70 T 11-11-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHALO_RS00010 b70f0d35e157f170865af625f09d59bc 355 SUPERFAMILY SSF55979 126 239 8.79E-23 T 11-11-2016 SHALO_RS00010 b70f0d35e157f170865af625f09d59bc 355 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 353 1.2E-79 T 11-11-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHALO_RS00010 b70f0d35e157f170865af625f09d59bc 355 PIRSF PIRSF000804 1 355 2.1E-73 T 11-11-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHALO_RS00010 b70f0d35e157f170865af625f09d59bc 355 SUPERFAMILY SSF55979 240 354 1.45E-20 T 11-11-2016 SHALO_RS00010 b70f0d35e157f170865af625f09d59bc 355 Gene3D G3DSA:3.10.150.10 1 121 1.3E-17 T 11-11-2016 SHALO_RS00010 b70f0d35e157f170865af625f09d59bc 355 Gene3D G3DSA:3.10.150.10 123 243 3.2E-28 T 11-11-2016 SHALO_RS00010 b70f0d35e157f170865af625f09d59bc 355 Pfam PF02767 DNA polymerase III beta subunit, central domain 129 238 7.3E-20 T 11-11-2016 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHALO_RS00010 b70f0d35e157f170865af625f09d59bc 355 SUPERFAMILY SSF55979 1 119 6.29E-21 T 11-11-2016 SHALO_RS00010 b70f0d35e157f170865af625f09d59bc 355 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 117 3.9E-16 T 11-11-2016 IPR022634 DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHALO_RS06835 f4ba85a5f067a46dc423df962702cf53 603 SUPERFAMILY SSF52518 352 528 1.98E-29 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold SHALO_RS06835 f4ba85a5f067a46dc423df962702cf53 603 Gene3D G3DSA:3.30.70.20 559 600 2.3E-7 T 11-11-2016 SHALO_RS06835 f4ba85a5f067a46dc423df962702cf53 603 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 14 179 6.4E-7 T 11-11-2016 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 SHALO_RS06835 f4ba85a5f067a46dc423df962702cf53 603 PIRSF PIRSF006439 1 603 1.6E-214 T 11-11-2016 IPR017721 Indolepyruvate ferredoxin oxidoreductase, alpha subunit GO:0043805|GO:0055114 SHALO_RS06835 f4ba85a5f067a46dc423df962702cf53 603 Gene3D G3DSA:3.40.50.920 241 294 7.0E-4 T 11-11-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 SHALO_RS06835 f4ba85a5f067a46dc423df962702cf53 603 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 385 514 6.5E-23 T 11-11-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 SHALO_RS06835 f4ba85a5f067a46dc423df962702cf53 603 SUPERFAMILY SSF54862 525 600 4.19E-11 T 11-11-2016 SHALO_RS06835 f4ba85a5f067a46dc423df962702cf53 603 SUPERFAMILY SSF52518 3 196 8.83E-48 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold SHALO_RS06835 f4ba85a5f067a46dc423df962702cf53 603 SUPERFAMILY SSF52922 234 296 8.83E-9 T 11-11-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 SHALO_RS06835 f4ba85a5f067a46dc423df962702cf53 603 Gene3D G3DSA:3.40.50.970 2 184 2.7E-47 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold SHALO_RS06835 f4ba85a5f067a46dc423df962702cf53 603 Gene3D G3DSA:3.40.50.970 348 558 4.3E-24 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold SHALO_RS12690 b685cced5dad8aa62d2363338b960f2c 314 SUPERFAMILY SSF160240 233 305 1.7E-6 T 11-11-2016 SHALO_RS12690 b685cced5dad8aa62d2363338b960f2c 314 Gene3D G3DSA:1.20.1510.10 33 226 8.0E-53 T 11-11-2016 IPR027469 Cation efflux protein transmembrane domain SHALO_RS12690 b685cced5dad8aa62d2363338b960f2c 314 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 35 307 2.2E-80 T 11-11-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 SHALO_RS12690 b685cced5dad8aa62d2363338b960f2c 314 SUPERFAMILY SSF161111 33 227 1.44E-51 T 11-11-2016 SHALO_RS12690 b685cced5dad8aa62d2363338b960f2c 314 Pfam PF01545 Cation efflux family 35 226 9.3E-44 T 11-11-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 SHALO_RS13085 83a0d6f2725e2baca315f6ac80d826be 261 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 26 246 5.4E-61 T 11-11-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SHALO_RS13085 83a0d6f2725e2baca315f6ac80d826be 261 Gene3D G3DSA:3.40.190.10 103 200 1.5E-20 T 11-11-2016 SHALO_RS13085 83a0d6f2725e2baca315f6ac80d826be 261 Gene3D G3DSA:3.40.190.10 207 246 1.4E-42 T 11-11-2016 SHALO_RS13085 83a0d6f2725e2baca315f6ac80d826be 261 Gene3D G3DSA:3.40.190.10 23 102 1.4E-42 T 11-11-2016 SHALO_RS13085 83a0d6f2725e2baca315f6ac80d826be 261 SMART SM00079 25 247 0.0016 T 11-11-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 SHALO_RS13085 83a0d6f2725e2baca315f6ac80d826be 261 SMART SM00062 25 248 4.9E-64 T 11-11-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SHALO_RS13085 83a0d6f2725e2baca315f6ac80d826be 261 SUPERFAMILY SSF53850 10 245 1.81E-63 T 11-11-2016 SHALO_RS09675 67c18b86365102910f67295a4013e2e2 596 Pfam PF00570 HRDC domain 526 591 1.1E-23 T 11-11-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 SHALO_RS09675 67c18b86365102910f67295a4013e2e2 596 SUPERFAMILY SSF52540 58 341 6.91E-53 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS09675 67c18b86365102910f67295a4013e2e2 596 SMART SM00341 522 596 1.1E-18 T 11-11-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 SHALO_RS09675 67c18b86365102910f67295a4013e2e2 596 Pfam PF16124 RecQ zinc-binding 335 395 8.5E-13 T 11-11-2016 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain SHALO_RS09675 67c18b86365102910f67295a4013e2e2 596 Gene3D G3DSA:3.40.50.300 5 196 2.8E-51 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS09675 67c18b86365102910f67295a4013e2e2 596 Pfam PF00270 DEAD/DEAH box helicase 19 179 2.6E-19 T 11-11-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SHALO_RS09675 67c18b86365102910f67295a4013e2e2 596 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 6 593 1.6E-206 T 11-11-2016 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 SHALO_RS09675 67c18b86365102910f67295a4013e2e2 596 SMART SM00956 404 505 1.1E-30 T 11-11-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 SHALO_RS09675 67c18b86365102910f67295a4013e2e2 596 Gene3D G3DSA:1.10.150.80 527 595 7.2E-25 T 11-11-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 SHALO_RS09675 67c18b86365102910f67295a4013e2e2 596 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 7 457 2.9E-153 T 11-11-2016 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 SHALO_RS09675 67c18b86365102910f67295a4013e2e2 596 Pfam PF00271 Helicase conserved C-terminal domain 219 323 1.2E-15 T 11-11-2016 IPR001650 Helicase, C-terminal SHALO_RS09675 67c18b86365102910f67295a4013e2e2 596 Gene3D G3DSA:3.40.50.300 199 335 4.1E-39 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS09675 67c18b86365102910f67295a4013e2e2 596 SMART SM00490 242 323 3.5E-26 T 11-11-2016 IPR001650 Helicase, C-terminal SHALO_RS09675 67c18b86365102910f67295a4013e2e2 596 SUPERFAMILY SSF46785 397 518 2.18E-27 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS09675 67c18b86365102910f67295a4013e2e2 596 SUPERFAMILY SSF47819 527 593 2.24E-24 T 11-11-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 SHALO_RS09675 67c18b86365102910f67295a4013e2e2 596 Pfam PF09382 RQC domain 400 506 4.0E-27 T 11-11-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 SHALO_RS09675 67c18b86365102910f67295a4013e2e2 596 Gene3D G3DSA:1.10.10.10 336 507 4.9E-45 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS09675 67c18b86365102910f67295a4013e2e2 596 SMART SM00487 13 207 3.4E-29 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SHALO_RS11900 51500c230275cc84ec890f282703dc2a 439 Pfam PF05538 Campylobacter major outer membrane protein 1 144 3.6E-10 T 11-11-2016 IPR008439 Campylobacter major outer membrane SHALO_RS11900 51500c230275cc84ec890f282703dc2a 439 Gene3D G3DSA:2.40.160.10 33 439 2.7E-36 T 11-11-2016 IPR023614 Porin domain SHALO_RS04790 1030d0b27bd3369499ec25e3a8230fbf 171 SUPERFAMILY SSF54862 37 166 2.72E-17 T 11-11-2016 SHALO_RS04790 1030d0b27bd3369499ec25e3a8230fbf 171 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 77 88 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_RS04790 1030d0b27bd3369499ec25e3a8230fbf 171 Gene3D G3DSA:3.30.70.20 90 121 1.4E-7 T 11-11-2016 SHALO_RS04790 1030d0b27bd3369499ec25e3a8230fbf 171 Pfam PF00037 4Fe-4S binding domain 142 163 3.4E-6 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_RS04790 1030d0b27bd3369499ec25e3a8230fbf 171 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 148 159 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_RS04790 1030d0b27bd3369499ec25e3a8230fbf 171 Pfam PF12838 4Fe-4S dicluster domain 77 131 2.2E-6 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_RS04790 1030d0b27bd3369499ec25e3a8230fbf 171 Gene3D G3DSA:3.30.70.20 40 89 7.1E-10 T 11-11-2016 SHALO_RS04790 1030d0b27bd3369499ec25e3a8230fbf 171 Gene3D G3DSA:3.30.70.20 122 168 8.1E-11 T 11-11-2016 SHALO_RS07415 be540f0a8a95cac457087ac23ee71a3b 327 Pfam PF00591 Glycosyl transferase family, a/b domain 63 313 2.4E-84 T 11-11-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 SHALO_RS07415 be540f0a8a95cac457087ac23ee71a3b 327 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 1 322 2.4E-108 T 11-11-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 SHALO_RS07415 be540f0a8a95cac457087ac23ee71a3b 327 SUPERFAMILY SSF52418 64 324 1.26E-89 T 11-11-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 SHALO_RS07415 be540f0a8a95cac457087ac23ee71a3b 327 Gene3D G3DSA:1.20.970.10 140 173 4.7E-29 T 11-11-2016 SHALO_RS07415 be540f0a8a95cac457087ac23ee71a3b 327 Gene3D G3DSA:1.20.970.10 2 50 4.7E-29 T 11-11-2016 SHALO_RS07415 be540f0a8a95cac457087ac23ee71a3b 327 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 1 323 32.366 T 11-11-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 SHALO_RS07415 be540f0a8a95cac457087ac23ee71a3b 327 SUPERFAMILY SSF47648 1 55 2.62E-7 T 11-11-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 SHALO_RS07415 be540f0a8a95cac457087ac23ee71a3b 327 Pfam PF02885 Glycosyl transferase family, helical bundle domain 3 51 1.0E-5 T 11-11-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 SHALO_RS07415 be540f0a8a95cac457087ac23ee71a3b 327 Gene3D G3DSA:3.40.1030.10 63 139 3.3E-81 T 11-11-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 SHALO_RS07415 be540f0a8a95cac457087ac23ee71a3b 327 Gene3D G3DSA:3.40.1030.10 174 324 3.3E-81 T 11-11-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 SHALO_RS11750 364f1d1b6a461ae42c17cb7819766308 294 Gene3D G3DSA:1.10.10.60 244 291 7.6E-15 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 SHALO_RS11750 364f1d1b6a461ae42c17cb7819766308 294 SUPERFAMILY SSF46689 244 291 2.02E-11 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 SHALO_RS11750 364f1d1b6a461ae42c17cb7819766308 294 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 258 273 7.5E-5 T 11-11-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SHALO_RS11750 364f1d1b6a461ae42c17cb7819766308 294 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 273 289 7.5E-5 T 11-11-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SHALO_RS11750 364f1d1b6a461ae42c17cb7819766308 294 Pfam PF12833 Helix-turn-helix domain 213 290 3.5E-17 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SHALO_RS11750 364f1d1b6a461ae42c17cb7819766308 294 SMART SM00342 208 289 4.1E-16 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SHALO_RS11005 62f3d8ed5ee94703474c15a4f5c3ddee 283 SUPERFAMILY SSF103481 195 279 1.83E-6 T 11-11-2016 SHALO_RS11005 62f3d8ed5ee94703474c15a4f5c3ddee 283 SUPERFAMILY SSF103481 33 129 4.84E-14 T 11-11-2016 SHALO_RS11005 62f3d8ed5ee94703474c15a4f5c3ddee 283 Pfam PF00892 EamA-like transporter family 1 125 8.1E-17 T 11-11-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SHALO_RS07655 cbda92c9177444913873e771179fcb0a 372 Pfam PF01888 CbiD 12 270 1.4E-90 T 11-11-2016 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377 SHALO_RS07655 cbda92c9177444913873e771179fcb0a 372 Hamap MF_00787 Cobalt-precorrin-5B C(1)-methyltransferase [cbiD]. 12 361 29.269 T 11-11-2016 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377 SHALO_RS07655 cbda92c9177444913873e771179fcb0a 372 SUPERFAMILY SSF111342 3 288 2.75E-83 T 11-11-2016 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377 SHALO_RS07655 cbda92c9177444913873e771179fcb0a 372 Gene3D G3DSA:3.30.2110.10 15 184 3.0E-53 T 11-11-2016 SHALO_RS07655 cbda92c9177444913873e771179fcb0a 372 TIGRFAM TIGR00312 cbiD: cobalamin biosynthesis protein CbiD 20 357 1.3E-87 T 11-11-2016 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377 SHALO_RS07655 cbda92c9177444913873e771179fcb0a 372 PIRSF PIRSF026782 8 365 1.5E-114 T 11-11-2016 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377 SHALO_RS05455 f96d414369dc288fcfa7e897b3e97776 215 SUPERFAMILY SSF52266 39 207 3.51E-40 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain SHALO_RS05455 f96d414369dc288fcfa7e897b3e97776 215 Gene3D G3DSA:3.40.50.1110 39 205 1.5E-42 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain SHALO_RS05455 f96d414369dc288fcfa7e897b3e97776 215 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 43 195 2.1E-22 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain SHALO_RS08510 ca23456834e254ada9ebb99d2af324f4 431 Pfam PF00815 Histidinol dehydrogenase 20 428 3.2E-167 T 11-11-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 SHALO_RS08510 ca23456834e254ada9ebb99d2af324f4 431 Gene3D G3DSA:3.40.50.1980 26 224 3.2E-76 T 11-11-2016 SHALO_RS08510 ca23456834e254ada9ebb99d2af324f4 431 PIRSF PIRSF000099 2 431 6.0E-168 T 11-11-2016 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 SHALO_RS08510 ca23456834e254ada9ebb99d2af324f4 431 Gene3D G3DSA:3.40.50.1980 225 374 2.6E-65 T 11-11-2016 SHALO_RS08510 ca23456834e254ada9ebb99d2af324f4 431 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 34 427 4.8E-161 T 11-11-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 SHALO_RS08510 ca23456834e254ada9ebb99d2af324f4 431 PRINTS PR00083 Histidinol dehydrogenase signature 230 251 1.5E-79 T 11-11-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 SHALO_RS08510 ca23456834e254ada9ebb99d2af324f4 431 PRINTS PR00083 Histidinol dehydrogenase signature 201 226 1.5E-79 T 11-11-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 SHALO_RS08510 ca23456834e254ada9ebb99d2af324f4 431 PRINTS PR00083 Histidinol dehydrogenase signature 362 380 1.5E-79 T 11-11-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 SHALO_RS08510 ca23456834e254ada9ebb99d2af324f4 431 PRINTS PR00083 Histidinol dehydrogenase signature 321 346 1.5E-79 T 11-11-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 SHALO_RS08510 ca23456834e254ada9ebb99d2af324f4 431 PRINTS PR00083 Histidinol dehydrogenase signature 252 271 1.5E-79 T 11-11-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 SHALO_RS08510 ca23456834e254ada9ebb99d2af324f4 431 PRINTS PR00083 Histidinol dehydrogenase signature 137 163 1.5E-79 T 11-11-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 SHALO_RS08510 ca23456834e254ada9ebb99d2af324f4 431 PRINTS PR00083 Histidinol dehydrogenase signature 171 197 1.5E-79 T 11-11-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 SHALO_RS08510 ca23456834e254ada9ebb99d2af324f4 431 PRINTS PR00083 Histidinol dehydrogenase signature 33 57 1.5E-79 T 11-11-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 SHALO_RS08510 ca23456834e254ada9ebb99d2af324f4 431 SUPERFAMILY SSF53720 29 428 1.02E-81 T 11-11-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 SHALO_RS08510 ca23456834e254ada9ebb99d2af324f4 431 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 5 428 40.788 T 11-11-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 SHALO_RS11725 52a7f6cc3975a345067fba046538cbf7 1041 PRINTS PR00702 Acriflavin resistance protein family signature 392 416 5.0E-107 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SHALO_RS11725 52a7f6cc3975a345067fba046538cbf7 1041 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 5.0E-107 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SHALO_RS11725 52a7f6cc3975a345067fba046538cbf7 1041 PRINTS PR00702 Acriflavin resistance protein family signature 9 33 5.0E-107 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SHALO_RS11725 52a7f6cc3975a345067fba046538cbf7 1041 PRINTS PR00702 Acriflavin resistance protein family signature 620 634 5.0E-107 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SHALO_RS11725 52a7f6cc3975a345067fba046538cbf7 1041 PRINTS PR00702 Acriflavin resistance protein family signature 446 469 5.0E-107 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SHALO_RS11725 52a7f6cc3975a345067fba046538cbf7 1041 PRINTS PR00702 Acriflavin resistance protein family signature 551 568 5.0E-107 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SHALO_RS11725 52a7f6cc3975a345067fba046538cbf7 1041 PRINTS PR00702 Acriflavin resistance protein family signature 364 385 5.0E-107 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SHALO_RS11725 52a7f6cc3975a345067fba046538cbf7 1041 PRINTS PR00702 Acriflavin resistance protein family signature 37 55 5.0E-107 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SHALO_RS11725 52a7f6cc3975a345067fba046538cbf7 1041 PRINTS PR00702 Acriflavin resistance protein family signature 337 360 5.0E-107 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SHALO_RS11725 52a7f6cc3975a345067fba046538cbf7 1041 Gene3D G3DSA:3.30.2090.10 720 808 1.8E-24 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SHALO_RS11725 52a7f6cc3975a345067fba046538cbf7 1041 SUPERFAMILY SSF82693 564 670 5.18E-28 T 11-11-2016 SHALO_RS11725 52a7f6cc3975a345067fba046538cbf7 1041 SUPERFAMILY SSF82693 671 720 6.54E-20 T 11-11-2016 SHALO_RS11725 52a7f6cc3975a345067fba046538cbf7 1041 SUPERFAMILY SSF82693 807 855 6.54E-20 T 11-11-2016 SHALO_RS11725 52a7f6cc3975a345067fba046538cbf7 1041 Gene3D G3DSA:3.30.70.1430 39 141 1.0E-33 T 11-11-2016 SHALO_RS11725 52a7f6cc3975a345067fba046538cbf7 1041 SUPERFAMILY SSF82693 136 183 8.72E-24 T 11-11-2016 SHALO_RS11725 52a7f6cc3975a345067fba046538cbf7 1041 SUPERFAMILY SSF82693 275 331 8.72E-24 T 11-11-2016 SHALO_RS11725 52a7f6cc3975a345067fba046538cbf7 1041 Gene3D G3DSA:1.20.1640.10 850 1033 2.4E-43 T 11-11-2016 SHALO_RS11725 52a7f6cc3975a345067fba046538cbf7 1041 Gene3D G3DSA:1.10.3850.10 280 500 2.1E-59 T 11-11-2016 SHALO_RS11725 52a7f6cc3975a345067fba046538cbf7 1041 SUPERFAMILY SSF82866 297 498 1.29E-48 T 11-11-2016 SHALO_RS11725 52a7f6cc3975a345067fba046538cbf7 1041 SUPERFAMILY SSF82714 183 273 8.5E-22 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SHALO_RS11725 52a7f6cc3975a345067fba046538cbf7 1041 Gene3D G3DSA:3.30.70.1440 671 719 3.9E-19 T 11-11-2016 SHALO_RS11725 52a7f6cc3975a345067fba046538cbf7 1041 Gene3D G3DSA:3.30.70.1440 816 849 3.9E-19 T 11-11-2016 SHALO_RS11725 52a7f6cc3975a345067fba046538cbf7 1041 Gene3D G3DSA:3.30.2090.10 182 276 5.0E-28 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SHALO_RS11725 52a7f6cc3975a345067fba046538cbf7 1041 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 3 1036 0.0 T 11-11-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 SHALO_RS11725 52a7f6cc3975a345067fba046538cbf7 1041 SUPERFAMILY SSF82714 721 808 4.71E-21 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SHALO_RS11725 52a7f6cc3975a345067fba046538cbf7 1041 SUPERFAMILY SSF82693 39 132 2.51E-26 T 11-11-2016 SHALO_RS11725 52a7f6cc3975a345067fba046538cbf7 1041 Pfam PF00873 AcrB/AcrD/AcrF family 2 1025 0.0 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SHALO_RS11725 52a7f6cc3975a345067fba046538cbf7 1041 Gene3D G3DSA:3.30.70.1430 566 670 2.0E-32 T 11-11-2016 SHALO_RS11725 52a7f6cc3975a345067fba046538cbf7 1041 SUPERFAMILY SSF82866 840 1024 5.1E-41 T 11-11-2016 SHALO_RS11055 6ff9b3afc48efbcda737d89617dced23 655 Gene3D G3DSA:3.40.50.300 176 361 2.0E-61 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS11055 6ff9b3afc48efbcda737d89617dced23 655 ProSitePatterns PS00674 AAA-protein family signature. 324 342 - T 11-11-2016 IPR003960 ATPase, AAA-type, conserved site GO:0005524 SHALO_RS11055 6ff9b3afc48efbcda737d89617dced23 655 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 131 622 1.5E-213 T 11-11-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 SHALO_RS11055 6ff9b3afc48efbcda737d89617dced23 655 SUPERFAMILY SSF52540 178 449 3.38E-67 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS11055 6ff9b3afc48efbcda737d89617dced23 655 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 219 352 8.8E-45 T 11-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SHALO_RS11055 6ff9b3afc48efbcda737d89617dced23 655 Pfam PF01434 Peptidase family M41 417 620 1.0E-68 T 11-11-2016 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 SHALO_RS11055 6ff9b3afc48efbcda737d89617dced23 655 Gene3D G3DSA:1.10.8.60 362 429 7.8E-22 T 11-11-2016 SHALO_RS11055 6ff9b3afc48efbcda737d89617dced23 655 SMART SM00382 215 356 3.9E-24 T 11-11-2016 IPR003593 AAA+ ATPase domain SHALO_RS11055 6ff9b3afc48efbcda737d89617dced23 655 SUPERFAMILY SSF140990 436 625 1.31E-60 T 11-11-2016 SHALO_RS11055 6ff9b3afc48efbcda737d89617dced23 655 Pfam PF06480 FtsH Extracellular 24 122 1.9E-6 T 11-11-2016 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 SHALO_RS11055 6ff9b3afc48efbcda737d89617dced23 655 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 21 652 34.547 T 11-11-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 SHALO_RS15035 fa1099b675896c486c7bcca0dc047486 807 Gene3D G3DSA:2.40.40.20 670 807 4.9E-30 T 11-11-2016 SHALO_RS15035 fa1099b675896c486c7bcca0dc047486 807 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 43 96 5.3E-9 T 11-11-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS15035 fa1099b675896c486c7bcca0dc047486 807 Gene3D G3DSA:2.20.25.90 43 101 7.2E-19 T 11-11-2016 SHALO_RS15035 fa1099b675896c486c7bcca0dc047486 807 Gene3D G3DSA:3.40.50.740 102 176 7.6E-52 T 11-11-2016 SHALO_RS15035 fa1099b675896c486c7bcca0dc047486 807 Gene3D G3DSA:3.40.50.740 364 572 7.6E-52 T 11-11-2016 SHALO_RS15035 fa1099b675896c486c7bcca0dc047486 807 Gene3D G3DSA:3.40.50.740 646 656 7.6E-52 T 11-11-2016 SHALO_RS15035 fa1099b675896c486c7bcca0dc047486 807 Gene3D G3DSA:3.40.228.10 177 363 1.5E-53 T 11-11-2016 SHALO_RS15035 fa1099b675896c486c7bcca0dc047486 807 Pfam PF01568 Molydopterin dinucleotide binding domain 685 800 8.2E-19 T 11-11-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 SHALO_RS15035 fa1099b675896c486c7bcca0dc047486 807 SUPERFAMILY SSF53706 44 521 1.7E-135 T 11-11-2016 SHALO_RS15035 fa1099b675896c486c7bcca0dc047486 807 SUPERFAMILY SSF53706 562 596 1.7E-135 T 11-11-2016 SHALO_RS15035 fa1099b675896c486c7bcca0dc047486 807 SUPERFAMILY SSF53706 623 674 1.7E-135 T 11-11-2016 SHALO_RS15035 fa1099b675896c486c7bcca0dc047486 807 SMART SM00926 43 97 7.8E-13 T 11-11-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS15035 fa1099b675896c486c7bcca0dc047486 807 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 461 478 - T 11-11-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 SHALO_RS15035 fa1099b675896c486c7bcca0dc047486 807 SUPERFAMILY SSF50692 646 807 2.12E-26 T 11-11-2016 IPR009010 Aspartate decarboxylase-like domain SHALO_RS15035 fa1099b675896c486c7bcca0dc047486 807 Pfam PF00384 Molybdopterin oxidoreductase 100 519 1.1E-56 T 11-11-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS01495 b65d78adbd25ba4eb5483623c9ef91fb 142 Gene3D G3DSA:3.30.300.70 5 75 2.5E-19 T 11-11-2016 IPR028989 Ribosome maturation factor RimP, N-terminal SHALO_RS01495 b65d78adbd25ba4eb5483623c9ef91fb 142 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 5 142 19.305 T 11-11-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 SHALO_RS01495 b65d78adbd25ba4eb5483623c9ef91fb 142 SUPERFAMILY SSF74942 79 142 3.4E-9 T 11-11-2016 IPR028998 Ribosome maturation factor RimP, C-terminal SHALO_RS01495 b65d78adbd25ba4eb5483623c9ef91fb 142 Pfam PF02576 Putative ribosome maturation factor RimP 7 137 1.1E-32 T 11-11-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 SHALO_RS01495 b65d78adbd25ba4eb5483623c9ef91fb 142 SUPERFAMILY SSF75420 7 78 5.36E-17 T 11-11-2016 IPR028989 Ribosome maturation factor RimP, N-terminal SHALO_RS01495 b65d78adbd25ba4eb5483623c9ef91fb 142 Gene3D G3DSA:2.30.30.180 83 138 2.3E-5 T 11-11-2016 IPR028998 Ribosome maturation factor RimP, C-terminal SHALO_RS14245 e215ade7bd029ab709fbfacb86831619 1025 SUPERFAMILY SSF82714 185 264 1.44E-12 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SHALO_RS14245 e215ade7bd029ab709fbfacb86831619 1025 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1021 3.5E-295 T 11-11-2016 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 SHALO_RS14245 e215ade7bd029ab709fbfacb86831619 1025 Gene3D G3DSA:1.10.3850.10 803 1022 5.9E-50 T 11-11-2016 SHALO_RS14245 e215ade7bd029ab709fbfacb86831619 1025 Gene3D G3DSA:1.10.3850.10 274 495 4.0E-62 T 11-11-2016 SHALO_RS14245 e215ade7bd029ab709fbfacb86831619 1025 Pfam PF00873 AcrB/AcrD/AcrF family 6 1019 3.0E-209 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SHALO_RS14245 e215ade7bd029ab709fbfacb86831619 1025 Gene3D G3DSA:3.30.70.1430 43 137 1.1E-17 T 11-11-2016 SHALO_RS14245 e215ade7bd029ab709fbfacb86831619 1025 Gene3D G3DSA:3.30.2090.10 184 264 9.5E-12 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SHALO_RS14245 e215ade7bd029ab709fbfacb86831619 1025 Gene3D G3DSA:3.30.2090.10 710 781 3.0E-9 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SHALO_RS14245 e215ade7bd029ab709fbfacb86831619 1025 SUPERFAMILY SSF82866 794 1022 4.05E-41 T 11-11-2016 SHALO_RS14245 e215ade7bd029ab709fbfacb86831619 1025 SUPERFAMILY SSF82693 43 126 5.23E-15 T 11-11-2016 SHALO_RS14245 e215ade7bd029ab709fbfacb86831619 1025 SUPERFAMILY SSF82693 138 182 1.41E-11 T 11-11-2016 SHALO_RS14245 e215ade7bd029ab709fbfacb86831619 1025 SUPERFAMILY SSF82693 268 322 1.41E-11 T 11-11-2016 SHALO_RS14245 e215ade7bd029ab709fbfacb86831619 1025 SUPERFAMILY SSF82714 711 791 6.02E-9 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SHALO_RS14245 e215ade7bd029ab709fbfacb86831619 1025 SUPERFAMILY SSF82866 292 493 1.44E-41 T 11-11-2016 SHALO_RS14245 e215ade7bd029ab709fbfacb86831619 1025 PRINTS PR00702 Acriflavin resistance protein family signature 383 407 1.2E-25 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SHALO_RS14245 e215ade7bd029ab709fbfacb86831619 1025 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 1.2E-25 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SHALO_RS14245 e215ade7bd029ab709fbfacb86831619 1025 PRINTS PR00702 Acriflavin resistance protein family signature 328 351 1.2E-25 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SHALO_RS14245 e215ade7bd029ab709fbfacb86831619 1025 PRINTS PR00702 Acriflavin resistance protein family signature 466 489 1.2E-25 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SHALO_RS14245 e215ade7bd029ab709fbfacb86831619 1025 PRINTS PR00702 Acriflavin resistance protein family signature 355 376 1.2E-25 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SHALO_RS07940 8c7e9e295e8787e47cd15d7343ea773a 207 Pfam PF09335 SNARE associated Golgi protein 33 159 4.3E-22 T 11-11-2016 IPR032816 SNARE associated Golgi protein SHALO_RS13245 2837fc3cd93115cace6e118b398e117b 260 Gene3D G3DSA:3.40.190.10 29 118 2.9E-26 T 11-11-2016 SHALO_RS13245 2837fc3cd93115cace6e118b398e117b 260 Gene3D G3DSA:3.40.190.10 214 253 2.9E-26 T 11-11-2016 SHALO_RS13245 2837fc3cd93115cace6e118b398e117b 260 SUPERFAMILY SSF53850 4 254 2.82E-46 T 11-11-2016 SHALO_RS13245 2837fc3cd93115cace6e118b398e117b 260 SMART SM00062 31 255 6.2E-40 T 11-11-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SHALO_RS13245 2837fc3cd93115cace6e118b398e117b 260 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 32 250 4.7E-41 T 11-11-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SHALO_RS13245 2837fc3cd93115cace6e118b398e117b 260 Gene3D G3DSA:3.40.190.10 121 201 2.1E-10 T 11-11-2016 SHALO_RS05400 9af7d002a855ce941e9564df59b8002e 626 Pfam PF00672 HAMP domain 275 345 1.5E-10 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SHALO_RS05400 9af7d002a855ce941e9564df59b8002e 626 SUPERFAMILY SSF58104 317 625 2.75E-57 T 11-11-2016 SHALO_RS05400 9af7d002a855ce941e9564df59b8002e 626 Pfam PF02743 Cache domain 37 254 7.9E-33 T 11-11-2016 IPR033479 Double Cache domain 1 SHALO_RS05400 9af7d002a855ce941e9564df59b8002e 626 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 431 624 1.8E-40 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SHALO_RS05400 9af7d002a855ce941e9564df59b8002e 626 Gene3D G3DSA:3.30.450.20 138 269 4.4E-27 T 11-11-2016 SHALO_RS05400 9af7d002a855ce941e9564df59b8002e 626 SUPERFAMILY SSF103190 108 179 2.15E-9 T 11-11-2016 IPR029151 Periplasmic sensor domain-like SHALO_RS05400 9af7d002a855ce941e9564df59b8002e 626 Gene3D G3DSA:1.10.287.950 385 596 2.3E-41 T 11-11-2016 SHALO_RS05400 9af7d002a855ce941e9564df59b8002e 626 SMART SM00304 295 349 1.2E-8 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SHALO_RS05400 9af7d002a855ce941e9564df59b8002e 626 SMART SM00283 364 625 2.9E-40 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SHALO_RS00955 4c1d5d66d7391597c202b7664fda1e5e 825 Gene3D G3DSA:3.30.70.20 130 224 1.4E-11 T 11-11-2016 SHALO_RS00955 4c1d5d66d7391597c202b7664fda1e5e 825 SMART SM00929 83 123 2.1E-14 T 11-11-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS00955 4c1d5d66d7391597c202b7664fda1e5e 825 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 209 220 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_RS00955 4c1d5d66d7391597c202b7664fda1e5e 825 SUPERFAMILY SSF53706 236 448 4.71E-18 T 11-11-2016 SHALO_RS00955 4c1d5d66d7391597c202b7664fda1e5e 825 SUPERFAMILY SSF53706 521 667 4.71E-18 T 11-11-2016 SHALO_RS00955 4c1d5d66d7391597c202b7664fda1e5e 825 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 4 76 1.1E-12 T 11-11-2016 SHALO_RS00955 4c1d5d66d7391597c202b7664fda1e5e 825 SUPERFAMILY SSF54292 4 74 1.27E-14 T 11-11-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 SHALO_RS00955 4c1d5d66d7391597c202b7664fda1e5e 825 Gene3D G3DSA:3.10.20.30 5 82 1.4E-5 T 11-11-2016 IPR012675 Beta-grasp domain SHALO_RS00955 4c1d5d66d7391597c202b7664fda1e5e 825 SUPERFAMILY SSF54862 75 229 6.28E-28 T 11-11-2016 SHALO_RS00955 4c1d5d66d7391597c202b7664fda1e5e 825 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 83 121 2.6E-13 T 11-11-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS08095 6944cd7bc7be23720f3b93b29c489065 511 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 288 303 - T 11-11-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 SHALO_RS08095 6944cd7bc7be23720f3b93b29c489065 511 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 226 239 - T 11-11-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 SHALO_RS08095 6944cd7bc7be23720f3b93b29c489065 511 Gene3D G3DSA:1.10.10.60 460 502 1.4E-10 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 SHALO_RS08095 6944cd7bc7be23720f3b93b29c489065 511 Gene3D G3DSA:1.10.8.60 375 449 2.7E-22 T 11-11-2016 SHALO_RS08095 6944cd7bc7be23720f3b93b29c489065 511 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 486 506 7.5E-6 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SHALO_RS08095 6944cd7bc7be23720f3b93b29c489065 511 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 469 486 7.5E-6 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SHALO_RS08095 6944cd7bc7be23720f3b93b29c489065 511 Gene3D G3DSA:3.30.450.40 14 171 1.8E-16 T 11-11-2016 IPR029016 GAF domain-like SHALO_RS08095 6944cd7bc7be23720f3b93b29c489065 511 Pfam PF02954 Bacterial regulatory protein, Fis family 463 503 1.6E-10 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SHALO_RS08095 6944cd7bc7be23720f3b93b29c489065 511 SUPERFAMILY SSF55781 14 167 4.8E-17 T 11-11-2016 IPR029016 GAF domain-like SHALO_RS08095 6944cd7bc7be23720f3b93b29c489065 511 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 414 423 - T 11-11-2016 IPR025944 Sigma-54 interaction domain, conserved site SHALO_RS08095 6944cd7bc7be23720f3b93b29c489065 511 Pfam PF13185 GAF domain 35 170 3.5E-8 T 11-11-2016 IPR003018 GAF domain GO:0005515 SHALO_RS08095 6944cd7bc7be23720f3b93b29c489065 511 SMART SM00382 222 365 2.1E-13 T 11-11-2016 IPR003593 AAA+ ATPase domain SHALO_RS08095 6944cd7bc7be23720f3b93b29c489065 511 SUPERFAMILY SSF52540 201 440 3.99E-69 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS08095 6944cd7bc7be23720f3b93b29c489065 511 Gene3D G3DSA:3.40.50.300 199 374 1.5E-59 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS08095 6944cd7bc7be23720f3b93b29c489065 511 SUPERFAMILY SSF46689 412 505 7.17E-8 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 SHALO_RS08095 6944cd7bc7be23720f3b93b29c489065 511 Pfam PF00158 Sigma-54 interaction domain 202 369 3.5E-72 T 11-11-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 SHALO_RS06785 47c14e62779aec17f19387bfabb914ce 207 Pfam PF00881 Nitroreductase family 12 186 4.4E-32 T 11-11-2016 IPR029479 Nitroreductase Reactome: R-HSA-209968 SHALO_RS06785 47c14e62779aec17f19387bfabb914ce 207 SUPERFAMILY SSF55469 7 205 9.42E-55 T 11-11-2016 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 SHALO_RS06785 47c14e62779aec17f19387bfabb914ce 207 Gene3D G3DSA:3.40.109.10 4 205 1.2E-65 T 11-11-2016 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 SHALO_RS02095 696d320ecd5f4068ee34725a546f5db1 78 Gene3D G3DSA:1.10.260.40 3 75 3.6E-12 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SHALO_RS02095 696d320ecd5f4068ee34725a546f5db1 78 SUPERFAMILY SSF47413 3 75 2.92E-11 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SHALO_RS02095 696d320ecd5f4068ee34725a546f5db1 78 Pfam PF01381 Helix-turn-helix 13 65 1.2E-6 T 11-11-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SHALO_RS02095 696d320ecd5f4068ee34725a546f5db1 78 SMART SM00530 12 70 7.9E-6 T 11-11-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SHALO_RS01870 5f9b7274f544170f92da0808ae695cc4 60 SUPERFAMILY SSF52833 1 60 3.17E-22 T 11-11-2016 IPR012336 Thioredoxin-like fold SHALO_RS01870 5f9b7274f544170f92da0808ae695cc4 60 ProSitePatterns PS00460 Glutathione peroxidases active site. 23 38 - T 11-11-2016 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 SHALO_RS01870 5f9b7274f544170f92da0808ae695cc4 60 Pfam PF00255 Glutathione peroxidase 3 60 1.6E-20 T 11-11-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 SHALO_RS01870 5f9b7274f544170f92da0808ae695cc4 60 Gene3D G3DSA:3.40.30.10 1 60 2.5E-25 T 11-11-2016 IPR012336 Thioredoxin-like fold SHALO_RS01870 5f9b7274f544170f92da0808ae695cc4 60 PRINTS PR01011 Glutathione peroxidase family signature 56 60 3.9E-6 T 11-11-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 SHALO_RS01870 5f9b7274f544170f92da0808ae695cc4 60 PRINTS PR01011 Glutathione peroxidase family signature 21 38 3.9E-6 T 11-11-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 SHALO_RS13840 02c75a505da952aba7881c292bc76834 712 Pfam PF08269 Cache domain 48 339 6.4E-62 T 11-11-2016 IPR004010 Double Cache domain 2 SHALO_RS13840 02c75a505da952aba7881c292bc76834 712 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 526 710 1.2E-43 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SHALO_RS13840 02c75a505da952aba7881c292bc76834 712 SUPERFAMILY SSF58104 403 712 2.09E-58 T 11-11-2016 SHALO_RS13840 02c75a505da952aba7881c292bc76834 712 Pfam PF00672 HAMP domain 364 431 1.2E-8 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SHALO_RS13840 02c75a505da952aba7881c292bc76834 712 SMART SM00283 443 711 4.1E-52 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SHALO_RS13840 02c75a505da952aba7881c292bc76834 712 Gene3D G3DSA:3.30.450.20 40 71 5.5E-38 T 11-11-2016 SHALO_RS13840 02c75a505da952aba7881c292bc76834 712 Gene3D G3DSA:3.30.450.20 219 339 6.3E-25 T 11-11-2016 SHALO_RS13840 02c75a505da952aba7881c292bc76834 712 Gene3D G3DSA:3.30.450.20 104 218 5.5E-38 T 11-11-2016 SHALO_RS13840 02c75a505da952aba7881c292bc76834 712 Gene3D G3DSA:1.10.287.950 660 709 4.8E-46 T 11-11-2016 SHALO_RS13840 02c75a505da952aba7881c292bc76834 712 Gene3D G3DSA:1.10.287.950 469 624 4.8E-46 T 11-11-2016 SHALO_RS13840 02c75a505da952aba7881c292bc76834 712 SMART SM00304 381 435 1.3E-7 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SHALO_RS13840 02c75a505da952aba7881c292bc76834 712 SMART SM01049 210 284 1.5 T 11-11-2016 IPR033480 Single Cache domain 2 SHALO_RS13840 02c75a505da952aba7881c292bc76834 712 SMART SM01049 45 167 1.9E-23 T 11-11-2016 IPR033480 Single Cache domain 2 SHALO_RS01395 05f29d29622f298c6d0f9c1c4029d111 275 SUPERFAMILY SSF51735 3 164 7.08E-35 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS01395 05f29d29622f298c6d0f9c1c4029d111 275 Gene3D G3DSA:3.40.50.720 1 173 5.4E-30 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS01395 05f29d29622f298c6d0f9c1c4029d111 275 Pfam PF02153 Prephenate dehydrogenase 15 266 3.2E-73 T 11-11-2016 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 SHALO_RS01395 05f29d29622f298c6d0f9c1c4029d111 275 SUPERFAMILY SSF48179 167 274 1.13E-33 T 11-11-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SHALO_RS05310 7563687fcb2f909d24a1af37a93ecea5 256 Pfam PF01841 Transglutaminase-like superfamily 139 207 2.8E-15 T 11-11-2016 IPR002931 Transglutaminase-like SHALO_RS05310 7563687fcb2f909d24a1af37a93ecea5 256 Gene3D G3DSA:3.90.260.10 146 207 9.2E-7 T 11-11-2016 IPR002931 Transglutaminase-like SHALO_RS05310 7563687fcb2f909d24a1af37a93ecea5 256 SMART SM00460 151 209 7.9E-15 T 11-11-2016 IPR002931 Transglutaminase-like SHALO_RS05310 7563687fcb2f909d24a1af37a93ecea5 256 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 7 81 9.2E-10 T 11-11-2016 IPR013589 Bacterial transglutaminase-like, N-terminal SHALO_RS05310 7563687fcb2f909d24a1af37a93ecea5 256 SUPERFAMILY SSF54001 117 230 2.94E-22 T 11-11-2016 SHALO_RS09640 a1c5f6e39d4832b6d346eacd21e5dd4e 294 Gene3D G3DSA:1.10.10.60 189 246 6.6E-16 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 SHALO_RS09640 a1c5f6e39d4832b6d346eacd21e5dd4e 294 Gene3D G3DSA:1.10.10.60 247 290 7.3E-9 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 SHALO_RS09640 a1c5f6e39d4832b6d346eacd21e5dd4e 294 Pfam PF12833 Helix-turn-helix domain 216 289 3.3E-18 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SHALO_RS09640 a1c5f6e39d4832b6d346eacd21e5dd4e 294 SUPERFAMILY SSF46689 245 291 3.45E-8 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 SHALO_RS09640 a1c5f6e39d4832b6d346eacd21e5dd4e 294 SUPERFAMILY SSF46689 193 243 2.01E-10 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 SHALO_RS09640 a1c5f6e39d4832b6d346eacd21e5dd4e 294 Pfam PF06719 AraC-type transcriptional regulator N-terminus 28 176 1.6E-39 T 11-11-2016 IPR009594 Transcription regulator HTH, AraC, N-terminal SHALO_RS09640 a1c5f6e39d4832b6d346eacd21e5dd4e 294 SMART SM00342 209 292 2.0E-21 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SHALO_RS01575 40604122f795bf29d287b19711e8a29d 761 SMART SM00926 40 94 5.1E-7 T 11-11-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS01575 40604122f795bf29d287b19711e8a29d 761 Pfam PF01568 Molydopterin dinucleotide binding domain 641 734 7.4E-16 T 11-11-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 SHALO_RS01575 40604122f795bf29d287b19711e8a29d 761 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 45 62 - T 11-11-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 SHALO_RS01575 40604122f795bf29d287b19711e8a29d 761 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 41 93 7.9E-9 T 11-11-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS01575 40604122f795bf29d287b19711e8a29d 761 SUPERFAMILY SSF50692 602 750 1.33E-24 T 11-11-2016 IPR009010 Aspartate decarboxylase-like domain SHALO_RS01575 40604122f795bf29d287b19711e8a29d 761 Pfam PF00384 Molybdopterin oxidoreductase 97 525 8.1E-73 T 11-11-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS01575 40604122f795bf29d287b19711e8a29d 761 Gene3D G3DSA:3.40.228.10 171 355 6.0E-47 T 11-11-2016 SHALO_RS01575 40604122f795bf29d287b19711e8a29d 761 Gene3D G3DSA:3.40.50.740 356 613 8.8E-54 T 11-11-2016 SHALO_RS01575 40604122f795bf29d287b19711e8a29d 761 Gene3D G3DSA:3.40.50.740 98 170 8.8E-54 T 11-11-2016 SHALO_RS01575 40604122f795bf29d287b19711e8a29d 761 Gene3D G3DSA:2.20.25.90 39 97 6.7E-13 T 11-11-2016 SHALO_RS01575 40604122f795bf29d287b19711e8a29d 761 SUPERFAMILY SSF53706 39 618 2.75E-128 T 11-11-2016 SHALO_RS01575 40604122f795bf29d287b19711e8a29d 761 Gene3D G3DSA:2.40.40.20 635 760 4.5E-26 T 11-11-2016 SHALO_RS01575 40604122f795bf29d287b19711e8a29d 761 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 467 484 - T 11-11-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 SHALO_RS05910 50d601e3a0b5dd4f9815e4295eff77e6 340 Pfam PF00925 GTP cyclohydrolase II 261 338 7.1E-8 T 11-11-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 SHALO_RS05910 50d601e3a0b5dd4f9815e4295eff77e6 340 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 1 202 37.173 T 11-11-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 SHALO_RS05910 50d601e3a0b5dd4f9815e4295eff77e6 340 Gene3D G3DSA:3.90.870.10 1 208 1.4E-90 T 11-11-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain SHALO_RS05910 50d601e3a0b5dd4f9815e4295eff77e6 340 SUPERFAMILY SSF55821 2 201 3.89E-79 T 11-11-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain SHALO_RS05910 50d601e3a0b5dd4f9815e4295eff77e6 340 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 8 197 2.2E-80 T 11-11-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 SHALO_RS05910 50d601e3a0b5dd4f9815e4295eff77e6 340 SUPERFAMILY SSF142695 215 336 2.75E-14 T 11-11-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 SHALO_RS05910 50d601e3a0b5dd4f9815e4295eff77e6 340 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 3 198 6.5E-75 T 11-11-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 SHALO_RS03630 44f661cd3c25e5240e75220ef386efe7 940 SUPERFAMILY SSF52540 427 563 8.44E-47 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS03630 44f661cd3c25e5240e75220ef386efe7 940 SUPERFAMILY SSF52540 4 202 8.44E-47 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS03630 44f661cd3c25e5240e75220ef386efe7 940 Gene3D G3DSA:1.10.8.280 289 396 1.5E-16 T 11-11-2016 SHALO_RS03630 44f661cd3c25e5240e75220ef386efe7 940 SUPERFAMILY SSF52540 611 903 5.82E-48 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS03630 44f661cd3c25e5240e75220ef386efe7 940 Gene3D G3DSA:3.40.50.300 811 930 8.6E-55 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS03630 44f661cd3c25e5240e75220ef386efe7 940 Gene3D G3DSA:3.40.50.300 5 49 4.3E-52 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS03630 44f661cd3c25e5240e75220ef386efe7 940 Gene3D G3DSA:3.40.50.300 472 586 4.3E-52 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS03630 44f661cd3c25e5240e75220ef386efe7 940 Gene3D G3DSA:3.40.50.300 594 658 8.6E-55 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS03630 44f661cd3c25e5240e75220ef386efe7 940 Gene3D G3DSA:1.20.1580.10 89 127 4.0E-53 T 11-11-2016 SHALO_RS03630 44f661cd3c25e5240e75220ef386efe7 940 Gene3D G3DSA:1.20.1580.10 397 471 4.0E-53 T 11-11-2016 SHALO_RS03630 44f661cd3c25e5240e75220ef386efe7 940 Gene3D G3DSA:1.20.1580.10 253 286 4.0E-53 T 11-11-2016 SHALO_RS03630 44f661cd3c25e5240e75220ef386efe7 940 ProSitePatterns PS00211 ABC transporters family signature. 481 495 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHALO_RS03630 44f661cd3c25e5240e75220ef386efe7 940 Gene3D G3DSA:1.20.1580.10 684 810 1.7E-54 T 11-11-2016 SHALO_RS03630 44f661cd3c25e5240e75220ef386efe7 940 ProSitePatterns PS00211 ABC transporters family signature. 820 834 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHALO_RS03630 44f661cd3c25e5240e75220ef386efe7 940 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 2 915 0.0 T 11-11-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 SHALO_RS03630 44f661cd3c25e5240e75220ef386efe7 940 Pfam PF00005 ABC transporter 614 850 1.8E-9 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_RS03630 44f661cd3c25e5240e75220ef386efe7 940 Gene3D G3DSA:3.30.1490.20 129 151 6.6E-14 T 11-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SHALO_RS03630 44f661cd3c25e5240e75220ef386efe7 940 Gene3D G3DSA:3.30.1490.20 198 239 6.6E-14 T 11-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SHALO_RS04150 b37195377f585c7547912e5d01d242a5 414 Pfam PF00563 EAL domain 180 405 3.3E-55 T 11-11-2016 IPR001633 EAL domain SHALO_RS04150 b37195377f585c7547912e5d01d242a5 414 SUPERFAMILY SSF141868 180 411 1.96E-62 T 11-11-2016 IPR001633 EAL domain SHALO_RS04150 b37195377f585c7547912e5d01d242a5 414 SMART SM00267 2 158 1.2E-5 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS04150 b37195377f585c7547912e5d01d242a5 414 SMART SM00052 174 410 1.2E-57 T 11-11-2016 IPR001633 EAL domain SHALO_RS04150 b37195377f585c7547912e5d01d242a5 414 Pfam PF00990 Diguanylate cyclase, GGDEF domain 16 153 3.0E-10 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS04150 b37195377f585c7547912e5d01d242a5 414 SUPERFAMILY SSF55073 17 157 2.67E-18 T 11-11-2016 IPR029787 Nucleotide cyclase SHALO_RS04150 b37195377f585c7547912e5d01d242a5 414 Gene3D G3DSA:3.30.70.270 16 160 1.2E-16 T 11-11-2016 SHALO_RS04150 b37195377f585c7547912e5d01d242a5 414 Gene3D G3DSA:3.20.20.450 177 410 4.3E-61 T 11-11-2016 IPR001633 EAL domain SHALO_RS04670 5256c32f0f3088eae6e02d892d2cf44c 70 Pfam PF12838 4Fe-4S dicluster domain 9 63 1.3E-8 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_RS04670 5256c32f0f3088eae6e02d892d2cf44c 70 Gene3D G3DSA:3.30.70.20 6 66 1.3E-13 T 11-11-2016 SHALO_RS04670 5256c32f0f3088eae6e02d892d2cf44c 70 SUPERFAMILY SSF54862 5 66 5.28E-15 T 11-11-2016 SHALO_RS04670 5256c32f0f3088eae6e02d892d2cf44c 70 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_RS02395 db36f49c255dc87e23c3e9eae23e4ed7 399 SUPERFAMILY SSF50465 307 399 1.76E-36 T 11-11-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal SHALO_RS02395 db36f49c255dc87e23c3e9eae23e4ed7 399 Pfam PF03143 Elongation factor Tu C-terminal domain 303 397 4.7E-33 T 11-11-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal SHALO_RS02395 db36f49c255dc87e23c3e9eae23e4ed7 399 Pfam PF00009 Elongation factor Tu GTP binding domain 10 206 1.3E-58 T 11-11-2016 SHALO_RS02395 db36f49c255dc87e23c3e9eae23e4ed7 399 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 147 4.9E-14 T 11-11-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SHALO_RS02395 db36f49c255dc87e23c3e9eae23e4ed7 399 Gene3D G3DSA:2.40.30.10 305 398 1.2E-46 T 11-11-2016 SHALO_RS02395 db36f49c255dc87e23c3e9eae23e4ed7 399 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 399 59.553 T 11-11-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 SHALO_RS02395 db36f49c255dc87e23c3e9eae23e4ed7 399 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 11-11-2016 IPR031157 Tr-type G domain, conserved site SHALO_RS02395 db36f49c255dc87e23c3e9eae23e4ed7 399 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 399 6.0E-228 T 11-11-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 SHALO_RS02395 db36f49c255dc87e23c3e9eae23e4ed7 399 Gene3D G3DSA:2.40.30.10 215 303 1.9E-36 T 11-11-2016 SHALO_RS02395 db36f49c255dc87e23c3e9eae23e4ed7 399 SUPERFAMILY SSF50447 210 306 3.73E-30 T 11-11-2016 IPR009000 Translation protein, beta-barrel domain SHALO_RS02395 db36f49c255dc87e23c3e9eae23e4ed7 399 Gene3D G3DSA:3.40.50.300 3 214 2.4E-70 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS02395 db36f49c255dc87e23c3e9eae23e4ed7 399 Pfam PF03144 Elongation factor Tu domain 2 230 299 1.2E-15 T 11-11-2016 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 SHALO_RS02395 db36f49c255dc87e23c3e9eae23e4ed7 399 PRINTS PR00315 GTP-binding elongation factor signature 58 66 2.3E-24 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SHALO_RS02395 db36f49c255dc87e23c3e9eae23e4ed7 399 PRINTS PR00315 GTP-binding elongation factor signature 131 140 2.3E-24 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SHALO_RS02395 db36f49c255dc87e23c3e9eae23e4ed7 399 PRINTS PR00315 GTP-binding elongation factor signature 14 27 2.3E-24 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SHALO_RS02395 db36f49c255dc87e23c3e9eae23e4ed7 399 PRINTS PR00315 GTP-binding elongation factor signature 94 105 2.3E-24 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SHALO_RS02395 db36f49c255dc87e23c3e9eae23e4ed7 399 PRINTS PR00315 GTP-binding elongation factor signature 78 88 2.3E-24 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SHALO_RS02395 db36f49c255dc87e23c3e9eae23e4ed7 399 SUPERFAMILY SSF52540 6 224 6.79E-61 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS13695 2b21ac6ac091999e1885d0e2e1ae8d38 207 Pfam PF01810 LysE type translocator 14 203 1.7E-33 T 11-11-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 SHALO_RS13695 2b21ac6ac091999e1885d0e2e1ae8d38 207 PIRSF PIRSF006324 1 206 2.2E-52 T 11-11-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 SHALO_RS13620 cdb1b12ce205754bdd58a1e788f3442e 229 SUPERFAMILY SSF51735 2 228 2.6E-71 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS13620 cdb1b12ce205754bdd58a1e788f3442e 229 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 122 130 5.8E-12 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_RS13620 cdb1b12ce205754bdd58a1e788f3442e 229 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 142 161 5.8E-12 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_RS13620 cdb1b12ce205754bdd58a1e788f3442e 229 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 69 80 5.8E-12 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_RS13620 cdb1b12ce205754bdd58a1e788f3442e 229 Gene3D G3DSA:3.40.50.720 2 228 1.6E-73 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS13620 cdb1b12ce205754bdd58a1e788f3442e 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 192 212 1.3E-39 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_RS13620 cdb1b12ce205754bdd58a1e788f3442e 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 1.3E-39 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_RS13620 cdb1b12ce205754bdd58a1e788f3442e 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 116 132 1.3E-39 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_RS13620 cdb1b12ce205754bdd58a1e788f3442e 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 69 80 1.3E-39 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_RS13620 cdb1b12ce205754bdd58a1e788f3442e 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 180 1.3E-39 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_RS13620 cdb1b12ce205754bdd58a1e788f3442e 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 142 161 1.3E-39 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_RS13620 cdb1b12ce205754bdd58a1e788f3442e 229 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 8 227 9.3E-54 T 11-11-2016 SHALO_RS13620 cdb1b12ce205754bdd58a1e788f3442e 229 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 129 157 - T 11-11-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 SHALO_RS03085 e3ba95771b3ddd6f520c90589a96e75c 469 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 10 460 2.4E-118 T 11-11-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 SHALO_RS03085 e3ba95771b3ddd6f520c90589a96e75c 469 Gene3D G3DSA:1.20.1600.10 137 309 1.6E-81 T 11-11-2016 SHALO_RS03085 e3ba95771b3ddd6f520c90589a96e75c 469 Gene3D G3DSA:1.20.1600.10 44 83 1.6E-81 T 11-11-2016 SHALO_RS03085 e3ba95771b3ddd6f520c90589a96e75c 469 Gene3D G3DSA:1.20.1600.10 347 460 1.6E-81 T 11-11-2016 SHALO_RS03085 e3ba95771b3ddd6f520c90589a96e75c 469 Gene3D G3DSA:2.20.200.10 310 345 4.7E-25 T 11-11-2016 SHALO_RS03085 e3ba95771b3ddd6f520c90589a96e75c 469 Gene3D G3DSA:2.20.200.10 93 136 4.7E-25 T 11-11-2016 SHALO_RS03085 e3ba95771b3ddd6f520c90589a96e75c 469 Pfam PF02321 Outer membrane efflux protein 57 249 4.9E-25 T 11-11-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SHALO_RS03085 e3ba95771b3ddd6f520c90589a96e75c 469 Pfam PF02321 Outer membrane efflux protein 282 457 1.8E-20 T 11-11-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SHALO_RS03085 e3ba95771b3ddd6f520c90589a96e75c 469 SUPERFAMILY SSF56954 4 461 5.36E-88 T 11-11-2016 SHALO_RS12485 316f12d7925c8926f2baf565f95fb670 480 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 25 478 1.8E-98 T 11-11-2016 IPR006261 Deoxyguanosinetriphosphate triphosphohydrolase GO:0000287|GO:0008832|GO:0046039 SHALO_RS12485 316f12d7925c8926f2baf565f95fb670 480 Pfam PF01966 HD domain 58 140 5.4E-8 T 11-11-2016 IPR006674 HD domain SHALO_RS12485 316f12d7925c8926f2baf565f95fb670 480 Gene3D G3DSA:1.10.3550.10 114 148 3.3E-24 T 11-11-2016 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal domain SHALO_RS12485 316f12d7925c8926f2baf565f95fb670 480 Gene3D G3DSA:1.10.3550.10 368 479 3.3E-24 T 11-11-2016 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal domain SHALO_RS12485 316f12d7925c8926f2baf565f95fb670 480 Pfam PF13286 Phosphohydrolase-associated domain 453 475 9.6E-6 T 11-11-2016 IPR026875 Phosphohydrolase-associated domain SHALO_RS12485 316f12d7925c8926f2baf565f95fb670 480 Gene3D G3DSA:1.10.3210.10 159 245 8.2E-53 T 11-11-2016 IPR006674 HD domain SHALO_RS12485 316f12d7925c8926f2baf565f95fb670 480 Gene3D G3DSA:1.10.3210.10 21 113 8.2E-53 T 11-11-2016 IPR006674 HD domain SHALO_RS12485 316f12d7925c8926f2baf565f95fb670 480 Gene3D G3DSA:1.10.3410.10 246 367 9.1E-24 T 11-11-2016 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain SHALO_RS12485 316f12d7925c8926f2baf565f95fb670 480 SMART SM00471 54 259 2.0E-9 T 11-11-2016 IPR003607 HD/PDEase domain SHALO_RS12485 316f12d7925c8926f2baf565f95fb670 480 SUPERFAMILY SSF109604 158 191 1.73E-55 T 11-11-2016 SHALO_RS12485 316f12d7925c8926f2baf565f95fb670 480 SUPERFAMILY SSF109604 21 125 1.73E-55 T 11-11-2016 SHALO_RS12485 316f12d7925c8926f2baf565f95fb670 480 SUPERFAMILY SSF109604 460 478 1.73E-55 T 11-11-2016 SHALO_RS12485 316f12d7925c8926f2baf565f95fb670 480 SUPERFAMILY SSF109604 228 409 1.73E-55 T 11-11-2016 SHALO_RS11120 eefbe8842dd905d01c3ed109acb171c3 204 SUPERFAMILY SSF51161 79 201 7.76E-35 T 11-11-2016 IPR011004 Trimeric LpxA-like SHALO_RS11120 eefbe8842dd905d01c3ed109acb171c3 204 Gene3D G3DSA:2.160.10.10 40 202 2.6E-41 T 11-11-2016 SHALO_RS11120 eefbe8842dd905d01c3ed109acb171c3 204 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 84 119 1.1E-7 T 11-11-2016 IPR001451 Hexapeptide repeat SHALO_RS11120 eefbe8842dd905d01c3ed109acb171c3 204 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 145 180 2.0E-7 T 11-11-2016 IPR001451 Hexapeptide repeat SHALO_RS11120 eefbe8842dd905d01c3ed109acb171c3 204 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 154 182 - T 11-11-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 SHALO_RS06910 ec015f0543cc6aa55e8a49b7a1ab14ac 551 SUPERFAMILY SSF52091 440 544 4.91E-18 T 11-11-2016 IPR002645 STAS domain SHALO_RS06910 ec015f0543cc6aa55e8a49b7a1ab14ac 551 Pfam PF01740 STAS domain 440 537 5.1E-14 T 11-11-2016 IPR002645 STAS domain SHALO_RS06910 ec015f0543cc6aa55e8a49b7a1ab14ac 551 Pfam PF00916 Sulfate permease family 10 374 3.2E-84 T 11-11-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 SHALO_RS06910 ec015f0543cc6aa55e8a49b7a1ab14ac 551 Gene3D G3DSA:3.30.750.24 440 544 6.0E-17 T 11-11-2016 IPR002645 STAS domain SHALO_RS06910 ec015f0543cc6aa55e8a49b7a1ab14ac 551 TIGRFAM TIGR00815 sulP: sulfate permease 3 538 2.0E-120 T 11-11-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 SHALO_RS05625 8c3a98d069fdfd75d33deacee7316254 131 Pfam PF02623 FliW protein 4 112 6.0E-26 T 11-11-2016 IPR003775 Flagellar assembly factor FliW GO:0044780 SHALO_RS05625 8c3a98d069fdfd75d33deacee7316254 131 Hamap MF_01185 Flagellar assembly factor FliW [fliW]. 1 120 18.687 T 11-11-2016 IPR003775 Flagellar assembly factor FliW GO:0044780 SHALO_RS05625 8c3a98d069fdfd75d33deacee7316254 131 Gene3D G3DSA:2.30.290.10 2 118 1.4E-30 T 11-11-2016 IPR024046 Flagellar assembly factor FliW domain SHALO_RS05625 8c3a98d069fdfd75d33deacee7316254 131 SUPERFAMILY SSF141457 2 113 1.44E-27 T 11-11-2016 IPR024046 Flagellar assembly factor FliW domain SHALO_RS00505 50462965a1e2323178a8b8855d54d52f 788 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 139 769 2.7E-189 T 11-11-2016 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 SHALO_RS00505 50462965a1e2323178a8b8855d54d52f 788 Gene3D G3DSA:3.20.70.20 649 770 6.5E-72 T 11-11-2016 SHALO_RS00505 50462965a1e2323178a8b8855d54d52f 788 Gene3D G3DSA:3.20.70.20 123 335 6.5E-72 T 11-11-2016 SHALO_RS00505 50462965a1e2323178a8b8855d54d52f 788 Gene3D G3DSA:3.20.70.20 494 594 6.5E-72 T 11-11-2016 SHALO_RS00505 50462965a1e2323178a8b8855d54d52f 788 Gene3D G3DSA:3.20.70.20 386 432 6.5E-72 T 11-11-2016 SHALO_RS00505 50462965a1e2323178a8b8855d54d52f 788 Pfam PF03477 ATP cone domain 3 88 6.6E-16 T 11-11-2016 IPR005144 ATP-cone domain Reactome: R-HSA-499943 SHALO_RS00505 50462965a1e2323178a8b8855d54d52f 788 Pfam PF02867 Ribonucleotide reductase, barrel domain 214 765 5.4E-165 T 11-11-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 SHALO_RS00505 50462965a1e2323178a8b8855d54d52f 788 SUPERFAMILY SSF48168 7 212 1.83E-66 T 11-11-2016 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 SHALO_RS00505 50462965a1e2323178a8b8855d54d52f 788 PRINTS PR01183 Ribonucleotide reductase large chain signature 546 568 5.5E-42 T 11-11-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 SHALO_RS00505 50462965a1e2323178a8b8855d54d52f 788 PRINTS PR01183 Ribonucleotide reductase large chain signature 289 308 5.5E-42 T 11-11-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 SHALO_RS00505 50462965a1e2323178a8b8855d54d52f 788 PRINTS PR01183 Ribonucleotide reductase large chain signature 508 531 5.5E-42 T 11-11-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 SHALO_RS00505 50462965a1e2323178a8b8855d54d52f 788 PRINTS PR01183 Ribonucleotide reductase large chain signature 574 597 5.5E-42 T 11-11-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 SHALO_RS00505 50462965a1e2323178a8b8855d54d52f 788 PRINTS PR01183 Ribonucleotide reductase large chain signature 649 676 5.5E-42 T 11-11-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 SHALO_RS00505 50462965a1e2323178a8b8855d54d52f 788 PRINTS PR01183 Ribonucleotide reductase large chain signature 420 431 5.5E-42 T 11-11-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 SHALO_RS00505 50462965a1e2323178a8b8855d54d52f 788 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 638 660 - T 11-11-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 SHALO_RS00505 50462965a1e2323178a8b8855d54d52f 788 SUPERFAMILY SSF51998 491 770 3.89E-177 T 11-11-2016 SHALO_RS00505 50462965a1e2323178a8b8855d54d52f 788 SUPERFAMILY SSF51998 213 446 3.89E-177 T 11-11-2016 SHALO_RS00505 50462965a1e2323178a8b8855d54d52f 788 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 136 209 1.1E-24 T 11-11-2016 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 SHALO_RS10105 39f48b40315aaa76b99767e5fa64c04a 263 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 3 256 8.4E-51 T 11-11-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 SHALO_RS10105 39f48b40315aaa76b99767e5fa64c04a 263 Gene3D G3DSA:3.30.230.10 3 161 2.9E-34 T 11-11-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SHALO_RS10105 39f48b40315aaa76b99767e5fa64c04a 263 Gene3D G3DSA:3.30.70.890 167 257 1.7E-5 T 11-11-2016 IPR013750 GHMP kinase, C-terminal domain SHALO_RS10105 39f48b40315aaa76b99767e5fa64c04a 263 SUPERFAMILY SSF55060 166 259 3.41E-8 T 11-11-2016 IPR013750 GHMP kinase, C-terminal domain SHALO_RS10105 39f48b40315aaa76b99767e5fa64c04a 263 SUPERFAMILY SSF54211 3 160 9.87E-31 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SHALO_RS10105 39f48b40315aaa76b99767e5fa64c04a 263 Pfam PF00288 GHMP kinases N terminal domain 90 146 2.8E-9 T 11-11-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 SHALO_RS10105 39f48b40315aaa76b99767e5fa64c04a 263 Hamap MF_00061 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 1 263 21.469 T 11-11-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 SHALO_RS10105 39f48b40315aaa76b99767e5fa64c04a 263 PIRSF PIRSF010376 1 262 1.3E-57 T 11-11-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 SHALO_RS13865 4b52859c76f98f5dd08083e75b08f0a2 313 PIRSF PIRSF019422 16 313 2.7E-101 T 11-11-2016 IPR026044 Membrane-bound lytic murein transglycosylase A SHALO_RS13865 4b52859c76f98f5dd08083e75b08f0a2 313 SUPERFAMILY SSF50685 5 312 1.46E-102 T 11-11-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain SHALO_RS13865 4b52859c76f98f5dd08083e75b08f0a2 313 Pfam PF06725 3D domain 238 309 1.7E-20 T 11-11-2016 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 SHALO_RS13865 4b52859c76f98f5dd08083e75b08f0a2 313 SMART SM00925 70 220 1.3E-68 T 11-11-2016 IPR005300 Lytic transglycosylase MltA GO:0004553 SHALO_RS13865 4b52859c76f98f5dd08083e75b08f0a2 313 Pfam PF03562 MltA specific insert domain 5 220 1.8E-68 T 11-11-2016 IPR005300 Lytic transglycosylase MltA GO:0004553 SHALO_RS13865 4b52859c76f98f5dd08083e75b08f0a2 313 Gene3D G3DSA:2.40.40.10 130 312 6.6E-43 T 11-11-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain SHALO_RS13865 4b52859c76f98f5dd08083e75b08f0a2 313 Gene3D G3DSA:2.40.40.10 17 128 6.7E-17 T 11-11-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain SHALO_RS11475 edf8db18ff5f2a0bfc12f26445757171 288 Pfam PF04321 RmlD substrate binding domain 3 283 1.7E-100 T 11-11-2016 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581 SHALO_RS11475 edf8db18ff5f2a0bfc12f26445757171 288 Gene3D G3DSA:3.40.50.720 3 196 1.1E-33 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS11475 edf8db18ff5f2a0bfc12f26445757171 288 SUPERFAMILY SSF51735 3 283 1.56E-95 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS11475 edf8db18ff5f2a0bfc12f26445757171 288 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 4 283 6.1E-95 T 11-11-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family Reactome: R-HSA-156581 SHALO_RS11475 edf8db18ff5f2a0bfc12f26445757171 288 Gene3D G3DSA:3.90.25.10 216 269 9.3E-32 T 11-11-2016 SHALO_RS14705 7673f717e5a22df432f0a756cb360021 487 Pfam PF07196 Flagellin hook IN motif 187 246 1.7E-8 T 11-11-2016 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 SHALO_RS14705 7673f717e5a22df432f0a756cb360021 487 Pfam PF07196 Flagellin hook IN motif 250 302 1.4E-11 T 11-11-2016 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 SHALO_RS14705 7673f717e5a22df432f0a756cb360021 487 Gene3D G3DSA:1.20.1330.10 389 443 3.6E-47 T 11-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SHALO_RS14705 7673f717e5a22df432f0a756cb360021 487 Gene3D G3DSA:1.20.1330.10 54 171 3.6E-47 T 11-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SHALO_RS14705 7673f717e5a22df432f0a756cb360021 487 PRINTS PR00207 Flagellin signature 111 134 1.5E-19 T 11-11-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 SHALO_RS14705 7673f717e5a22df432f0a756cb360021 487 PRINTS PR00207 Flagellin signature 76 95 1.5E-19 T 11-11-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 SHALO_RS14705 7673f717e5a22df432f0a756cb360021 487 PRINTS PR00207 Flagellin signature 37 54 1.5E-19 T 11-11-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 SHALO_RS14705 7673f717e5a22df432f0a756cb360021 487 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 143 1.7E-43 T 11-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SHALO_RS14705 7673f717e5a22df432f0a756cb360021 487 Pfam PF00700 Bacterial flagellin C-terminal helical region 402 486 4.0E-23 T 11-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SHALO_RS14705 7673f717e5a22df432f0a756cb360021 487 SUPERFAMILY SSF64518 1 487 1.01E-99 T 11-11-2016 SHALO_RS07485 6fa515654506bcf87bb500ccb45b3553 560 Gene3D G3DSA:3.30.450.20 145 269 7.5E-17 T 11-11-2016 SHALO_RS07485 6fa515654506bcf87bb500ccb45b3553 560 SUPERFAMILY SSF47384 317 393 1.0E-4 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS07485 6fa515654506bcf87bb500ccb45b3553 560 Pfam PF02743 Cache domain 36 258 1.5E-16 T 11-11-2016 IPR033479 Double Cache domain 1 SHALO_RS07485 6fa515654506bcf87bb500ccb45b3553 560 SUPERFAMILY SSF55874 391 544 4.73E-18 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS07485 6fa515654506bcf87bb500ccb45b3553 560 Gene3D G3DSA:3.30.565.10 395 543 1.3E-18 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS07485 6fa515654506bcf87bb500ccb45b3553 560 SMART SM00387 436 548 3.4E-6 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS07485 6fa515654506bcf87bb500ccb45b3553 560 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 439 544 4.9E-8 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS04000 63c18569e9259d3fcfc83ba0b19e6c2b 437 TIGRFAM TIGR01109 Na_pump_decarbB: sodium ion-translocating decarboxylase, beta subunit 79 431 1.7E-167 T 11-11-2016 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 SHALO_RS04000 63c18569e9259d3fcfc83ba0b19e6c2b 437 PIRSF PIRSF015658 54 437 4.9E-170 T 11-11-2016 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 SHALO_RS04000 63c18569e9259d3fcfc83ba0b19e6c2b 437 Pfam PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit 80 436 3.0E-159 T 11-11-2016 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 SHALO_RS07195 c7c1f9566877749fcc16946c48d14094 290 SUPERFAMILY SSF47240 12 128 1.74E-8 T 11-11-2016 IPR009078 Ferritin-like superfamily SHALO_RS07195 c7c1f9566877749fcc16946c48d14094 290 Gene3D G3DSA:1.20.1260.10 16 127 2.8E-5 T 11-11-2016 IPR012347 Ferritin-related SHALO_RS08235 7a9ae4912a5980a0a17a8a883e86ce45 728 Gene3D G3DSA:3.30.450.20 365 489 1.7E-10 T 11-11-2016 SHALO_RS08235 7a9ae4912a5980a0a17a8a883e86ce45 728 Pfam PF13426 PAS domain 384 477 3.1E-6 T 11-11-2016 IPR000014 PAS domain SHALO_RS08235 7a9ae4912a5980a0a17a8a883e86ce45 728 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 614 722 1.1E-16 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS08235 7a9ae4912a5980a0a17a8a883e86ce45 728 SMART SM00387 612 725 1.9E-14 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS08235 7a9ae4912a5980a0a17a8a883e86ce45 728 Gene3D G3DSA:3.30.565.10 572 721 8.9E-26 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS08235 7a9ae4912a5980a0a17a8a883e86ce45 728 Pfam PF04392 ABC transporter substrate binding protein 111 311 1.3E-9 T 11-11-2016 IPR007487 ABC transporter, substrate-binding protein SHALO_RS08235 7a9ae4912a5980a0a17a8a883e86ce45 728 SUPERFAMILY SSF55785 355 476 1.12E-11 T 11-11-2016 IPR000014 PAS domain SHALO_RS08235 7a9ae4912a5980a0a17a8a883e86ce45 728 Gene3D G3DSA:1.10.287.130 498 564 8.2E-7 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS08235 7a9ae4912a5980a0a17a8a883e86ce45 728 SUPERFAMILY SSF47384 497 568 1.1E-9 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS08235 7a9ae4912a5980a0a17a8a883e86ce45 728 SUPERFAMILY SSF55874 571 719 4.06E-24 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS08235 7a9ae4912a5980a0a17a8a883e86ce45 728 Gene3D G3DSA:3.40.50.2300 240 290 5.4E-6 T 11-11-2016 SHALO_RS08235 7a9ae4912a5980a0a17a8a883e86ce45 728 PRINTS PR00344 Bacterial sensor protein C-terminal signature 685 703 1.0E-7 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS08235 7a9ae4912a5980a0a17a8a883e86ce45 728 PRINTS PR00344 Bacterial sensor protein C-terminal signature 656 670 1.0E-7 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS08235 7a9ae4912a5980a0a17a8a883e86ce45 728 PRINTS PR00344 Bacterial sensor protein C-terminal signature 674 684 1.0E-7 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS04285 2b474c14cf1b7f9350cbc7d34dcd8835 401 SMART SM00363 340 401 2.2E-5 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 SHALO_RS04285 2b474c14cf1b7f9350cbc7d34dcd8835 401 Pfam PF01479 S4 domain 341 380 1.6E-6 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 SHALO_RS04285 2b474c14cf1b7f9350cbc7d34dcd8835 401 Gene3D G3DSA:3.10.290.10 332 399 5.7E-24 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 SHALO_RS04285 2b474c14cf1b7f9350cbc7d34dcd8835 401 SUPERFAMILY SSF55174 303 400 1.96E-17 T 11-11-2016 SHALO_RS04285 2b474c14cf1b7f9350cbc7d34dcd8835 401 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 4 400 7.6E-118 T 11-11-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 SHALO_RS04285 2b474c14cf1b7f9350cbc7d34dcd8835 401 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 164 179 7.6E-22 T 11-11-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 SHALO_RS04285 2b474c14cf1b7f9350cbc7d34dcd8835 401 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 49 71 7.6E-22 T 11-11-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 SHALO_RS04285 2b474c14cf1b7f9350cbc7d34dcd8835 401 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 181 203 7.6E-22 T 11-11-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 SHALO_RS04285 2b474c14cf1b7f9350cbc7d34dcd8835 401 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 215 227 7.6E-22 T 11-11-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 SHALO_RS04285 2b474c14cf1b7f9350cbc7d34dcd8835 401 Pfam PF00579 tRNA synthetases class I (W and Y) 35 319 2.2E-74 T 11-11-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 SHALO_RS04285 2b474c14cf1b7f9350cbc7d34dcd8835 401 Gene3D G3DSA:1.10.240.10 232 331 2.1E-33 T 11-11-2016 SHALO_RS04285 2b474c14cf1b7f9350cbc7d34dcd8835 401 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 1 400 45.088 T 11-11-2016 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 SHALO_RS04285 2b474c14cf1b7f9350cbc7d34dcd8835 401 Gene3D G3DSA:3.40.50.620 10 231 3.3E-76 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHALO_RS04285 2b474c14cf1b7f9350cbc7d34dcd8835 401 SUPERFAMILY SSF52374 8 317 1.27E-87 T 11-11-2016 SHALO_RS04285 2b474c14cf1b7f9350cbc7d34dcd8835 401 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 45 55 - T 11-11-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 SHALO_RS08160 b1a859ff75e44a44d8a1710af9f6fc8e 541 SMART SM00304 211 264 0.0012 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SHALO_RS08160 b1a859ff75e44a44d8a1710af9f6fc8e 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 377 404 8.7E-21 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SHALO_RS08160 b1a859ff75e44a44d8a1710af9f6fc8e 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 8.7E-21 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SHALO_RS08160 b1a859ff75e44a44d8a1710af9f6fc8e 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 406 435 8.7E-21 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SHALO_RS08160 b1a859ff75e44a44d8a1710af9f6fc8e 541 Pfam PF00672 HAMP domain 192 260 3.6E-8 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SHALO_RS08160 b1a859ff75e44a44d8a1710af9f6fc8e 541 SMART SM00283 282 526 6.2E-34 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SHALO_RS08160 b1a859ff75e44a44d8a1710af9f6fc8e 541 SUPERFAMILY SSF58104 233 541 8.5E-57 T 11-11-2016 SHALO_RS08160 b1a859ff75e44a44d8a1710af9f6fc8e 541 Gene3D G3DSA:1.10.287.950 294 503 4.6E-46 T 11-11-2016 SHALO_RS08160 b1a859ff75e44a44d8a1710af9f6fc8e 541 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 344 539 1.1E-36 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SHALO_RS02660 22208f8785a76ed3c6fcce84234bc1ca 140 SUPERFAMILY SSF55729 1 132 5.57E-23 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase SHALO_RS02660 22208f8785a76ed3c6fcce84234bc1ca 140 Pfam PF00583 Acetyltransferase (GNAT) family 48 128 5.3E-10 T 11-11-2016 IPR000182 GNAT domain GO:0008080 SHALO_RS02660 22208f8785a76ed3c6fcce84234bc1ca 140 Gene3D G3DSA:3.40.630.30 1 137 3.8E-29 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase SHALO_RS04160 abafc59d0346c0423d821b35b04cd5a8 342 SUPERFAMILY SSF51395 1 329 1.58E-108 T 11-11-2016 SHALO_RS04160 abafc59d0346c0423d821b35b04cd5a8 342 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 13 322 5.8E-74 T 11-11-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 SHALO_RS04160 abafc59d0346c0423d821b35b04cd5a8 342 Gene3D G3DSA:3.20.20.70 1 328 1.7E-118 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_RS10460 1783c95fca4b95d2183e4b07ced710a3 189 SUPERFAMILY SSF52317 1 188 4.22E-58 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like SHALO_RS10460 1783c95fca4b95d2183e4b07ced710a3 189 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 188 2.1E-76 T 11-11-2016 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 SHALO_RS10460 1783c95fca4b95d2183e4b07ced710a3 189 Gene3D G3DSA:3.40.50.880 1 188 4.1E-67 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like SHALO_RS10460 1783c95fca4b95d2183e4b07ced710a3 189 PRINTS PR00097 Anthranilate synthase component II signature 74 85 1.6E-34 T 11-11-2016 SHALO_RS10460 1783c95fca4b95d2183e4b07ced710a3 189 PRINTS PR00097 Anthranilate synthase component II signature 2 16 1.6E-34 T 11-11-2016 SHALO_RS10460 1783c95fca4b95d2183e4b07ced710a3 189 PRINTS PR00097 Anthranilate synthase component II signature 99 107 1.6E-34 T 11-11-2016 SHALO_RS10460 1783c95fca4b95d2183e4b07ced710a3 189 PRINTS PR00097 Anthranilate synthase component II signature 120 132 1.6E-34 T 11-11-2016 SHALO_RS10460 1783c95fca4b95d2183e4b07ced710a3 189 PRINTS PR00097 Anthranilate synthase component II signature 166 179 1.6E-34 T 11-11-2016 SHALO_RS10460 1783c95fca4b95d2183e4b07ced710a3 189 PRINTS PR00097 Anthranilate synthase component II signature 47 56 1.6E-34 T 11-11-2016 SHALO_RS10460 1783c95fca4b95d2183e4b07ced710a3 189 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 6.3E-7 T 11-11-2016 SHALO_RS10460 1783c95fca4b95d2183e4b07ced710a3 189 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 6.3E-7 T 11-11-2016 SHALO_RS10460 1783c95fca4b95d2183e4b07ced710a3 189 PRINTS PR00096 Glutamine amidotransferase superfamily signature 166 179 1.7E-14 T 11-11-2016 SHALO_RS10460 1783c95fca4b95d2183e4b07ced710a3 189 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 1.7E-14 T 11-11-2016 SHALO_RS10460 1783c95fca4b95d2183e4b07ced710a3 189 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 1.7E-14 T 11-11-2016 SHALO_RS10460 1783c95fca4b95d2183e4b07ced710a3 189 Pfam PF00117 Glutamine amidotransferase class-I 4 187 7.0E-54 T 11-11-2016 IPR017926 Glutamine amidotransferase SHALO_RS07400 c526083ecdcc429a0ae20223038b5031 139 SUPERFAMILY SSF52821 23 127 1.24E-18 T 11-11-2016 IPR001763 Rhodanese-like domain SHALO_RS07400 c526083ecdcc429a0ae20223038b5031 139 Gene3D G3DSA:3.40.250.10 30 129 2.9E-18 T 11-11-2016 IPR001763 Rhodanese-like domain SHALO_RS07400 c526083ecdcc429a0ae20223038b5031 139 Pfam PF00581 Rhodanese-like domain 40 125 8.9E-10 T 11-11-2016 IPR001763 Rhodanese-like domain SHALO_RS07400 c526083ecdcc429a0ae20223038b5031 139 SMART SM00450 32 130 4.7E-12 T 11-11-2016 IPR001763 Rhodanese-like domain SHALO_RS05125 1c43423ba74c53281e9c86897907ebd2 212 Gene3D G3DSA:1.10.443.10 35 208 1.2E-35 T 11-11-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 SHALO_RS05125 1c43423ba74c53281e9c86897907ebd2 212 SUPERFAMILY SSF56349 36 204 1.09E-33 T 11-11-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 SHALO_RS05125 1c43423ba74c53281e9c86897907ebd2 212 Pfam PF00589 Phage integrase family 37 195 1.9E-29 T 11-11-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 SHALO_RS00120 3ce978adb8de719540019f1bade8b878 619 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 459 617 7.7E-54 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS00120 3ce978adb8de719540019f1bade8b878 619 SUPERFAMILY SSF103190 59 208 9.03E-42 T 11-11-2016 IPR029151 Periplasmic sensor domain-like SHALO_RS00120 3ce978adb8de719540019f1bade8b878 619 SMART SM00267 451 619 1.7E-65 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS00120 3ce978adb8de719540019f1bade8b878 619 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 341 460 1.0E-18 T 11-11-2016 IPR000014 PAS domain SHALO_RS00120 3ce978adb8de719540019f1bade8b878 619 Gene3D G3DSA:3.30.70.270 464 618 2.6E-53 T 11-11-2016 SHALO_RS00120 3ce978adb8de719540019f1bade8b878 619 SUPERFAMILY SSF55073 467 618 6.91E-50 T 11-11-2016 IPR029787 Nucleotide cyclase SHALO_RS00120 3ce978adb8de719540019f1bade8b878 619 Pfam PF08447 PAS fold 364 446 2.6E-12 T 11-11-2016 IPR013655 PAS fold-3 GO:0005515 SHALO_RS00120 3ce978adb8de719540019f1bade8b878 619 Gene3D G3DSA:3.30.450.20 76 209 5.7E-41 T 11-11-2016 SHALO_RS00120 3ce978adb8de719540019f1bade8b878 619 Gene3D G3DSA:3.30.450.20 352 454 4.3E-22 T 11-11-2016 SHALO_RS00120 3ce978adb8de719540019f1bade8b878 619 SUPERFAMILY SSF55785 355 452 1.64E-22 T 11-11-2016 IPR000014 PAS domain SHALO_RS00120 3ce978adb8de719540019f1bade8b878 619 SMART SM00086 413 455 8.0E-4 T 11-11-2016 IPR001610 PAC motif SHALO_RS00120 3ce978adb8de719540019f1bade8b878 619 Pfam PF00990 Diguanylate cyclase, GGDEF domain 463 614 4.1E-49 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS00120 3ce978adb8de719540019f1bade8b878 619 Pfam PF02743 Cache domain 61 272 8.5E-16 T 11-11-2016 IPR033479 Double Cache domain 1 SHALO_RS14920 2e39a6b0ad917a6412fb3e1bfb03cd52 169 Pfam PF14358 Domain of unknown function (DUF4405) 8 59 2.3E-8 T 11-11-2016 IPR025517 Domain of unknown function DUF4405 SHALO_RS05465 fd74ae116b955fbfc1eee397009f161f 605 SUPERFAMILY SSF54631 146 271 8.46E-21 T 11-11-2016 SHALO_RS05465 fd74ae116b955fbfc1eee397009f161f 605 Pfam PF03445 Putative nucleotidyltransferase DUF294 297 423 3.9E-37 T 11-11-2016 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 SHALO_RS05465 fd74ae116b955fbfc1eee397009f161f 605 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 462 599 1.5E-39 T 11-11-2016 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding SHALO_RS05465 fd74ae116b955fbfc1eee397009f161f 605 SMART SM00116 222 269 0.002 T 11-11-2016 IPR000644 CBS domain SHALO_RS05465 fd74ae116b955fbfc1eee397009f161f 605 SMART SM00116 157 205 29.0 T 11-11-2016 IPR000644 CBS domain SHALO_RS05465 fd74ae116b955fbfc1eee397009f161f 605 Pfam PF00571 CBS domain 220 269 5.7E-6 T 11-11-2016 IPR000644 CBS domain SHALO_RS05465 fd74ae116b955fbfc1eee397009f161f 605 Gene3D G3DSA:3.10.580.10 149 270 8.0E-20 T 11-11-2016 SHALO_RS05465 fd74ae116b955fbfc1eee397009f161f 605 SUPERFAMILY SSF51206 3 130 2.75E-16 T 11-11-2016 IPR018490 Cyclic nucleotide-binding-like SHALO_RS05465 fd74ae116b955fbfc1eee397009f161f 605 Gene3D G3DSA:2.60.120.10 3 136 1.5E-17 T 11-11-2016 IPR014710 RmlC-like jelly roll fold SHALO_RS05465 fd74ae116b955fbfc1eee397009f161f 605 SMART SM00100 15 130 0.0045 T 11-11-2016 IPR000595 Cyclic nucleotide-binding domain SHALO_RS05465 fd74ae116b955fbfc1eee397009f161f 605 Pfam PF00027 Cyclic nucleotide-binding domain 35 115 4.6E-7 T 11-11-2016 IPR000595 Cyclic nucleotide-binding domain SHALO_RS12395 d59a6194f0d39ce24fab0a88d6a9ff25 164 SMART SM00260 9 146 3.8E-29 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SHALO_RS12395 d59a6194f0d39ce24fab0a88d6a9ff25 164 Gene3D G3DSA:2.40.50.180 51 88 2.3E-11 T 11-11-2016 SHALO_RS12395 d59a6194f0d39ce24fab0a88d6a9ff25 164 Gene3D G3DSA:2.30.30.40 89 115 2.1E-5 T 11-11-2016 SHALO_RS12395 d59a6194f0d39ce24fab0a88d6a9ff25 164 Pfam PF01584 CheW-like domain 14 149 3.2E-33 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SHALO_RS12395 d59a6194f0d39ce24fab0a88d6a9ff25 164 SUPERFAMILY SSF50341 12 151 2.35E-36 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SHALO_RS04605 b0f361e1368439d5eecd8f26c34ad657 176 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 4 76 4.2E-11 T 11-11-2016 IPR005126 NapC/NirT cytochrome c, N-terminal SHALO_RS04605 b0f361e1368439d5eecd8f26c34ad657 176 SUPERFAMILY SSF48695 21 159 1.93E-14 T 11-11-2016 IPR011031 Multihaem cytochrome SHALO_RS04605 b0f361e1368439d5eecd8f26c34ad657 176 Gene3D G3DSA:1.10.3820.10 6 158 2.8E-12 T 11-11-2016 SHALO_RS06665 e26e7b87a838c8749f8a89f6c3aaf42e 984 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 555 718 7.3E-46 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS06665 e26e7b87a838c8749f8a89f6c3aaf42e 984 Gene3D G3DSA:3.20.20.450 734 983 1.1E-90 T 11-11-2016 IPR001633 EAL domain SHALO_RS06665 e26e7b87a838c8749f8a89f6c3aaf42e 984 Pfam PF00990 Diguanylate cyclase, GGDEF domain 559 715 1.9E-49 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS06665 e26e7b87a838c8749f8a89f6c3aaf42e 984 Pfam PF08448 PAS fold 433 542 3.1E-7 T 11-11-2016 IPR013656 PAS fold-4 SHALO_RS06665 e26e7b87a838c8749f8a89f6c3aaf42e 984 SMART SM00091 426 492 3.4E-4 T 11-11-2016 IPR000014 PAS domain SHALO_RS06665 e26e7b87a838c8749f8a89f6c3aaf42e 984 SUPERFAMILY SSF55785 437 548 3.14E-10 T 11-11-2016 IPR000014 PAS domain SHALO_RS06665 e26e7b87a838c8749f8a89f6c3aaf42e 984 SUPERFAMILY SSF55073 564 720 5.02E-50 T 11-11-2016 IPR029787 Nucleotide cyclase SHALO_RS06665 e26e7b87a838c8749f8a89f6c3aaf42e 984 Pfam PF00563 EAL domain 736 971 7.7E-68 T 11-11-2016 IPR001633 EAL domain SHALO_RS06665 e26e7b87a838c8749f8a89f6c3aaf42e 984 Gene3D G3DSA:3.30.450.20 425 554 2.3E-14 T 11-11-2016 SHALO_RS06665 e26e7b87a838c8749f8a89f6c3aaf42e 984 Pfam PF08269 Cache domain 38 329 1.2E-82 T 11-11-2016 IPR004010 Double Cache domain 2 SHALO_RS06665 e26e7b87a838c8749f8a89f6c3aaf42e 984 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 425 548 1.5E-6 T 11-11-2016 IPR000014 PAS domain SHALO_RS06665 e26e7b87a838c8749f8a89f6c3aaf42e 984 SMART SM00052 730 976 6.2E-101 T 11-11-2016 IPR001633 EAL domain SHALO_RS06665 e26e7b87a838c8749f8a89f6c3aaf42e 984 SMART SM01049 74 168 1.1E-12 T 11-11-2016 IPR033480 Single Cache domain 2 SHALO_RS06665 e26e7b87a838c8749f8a89f6c3aaf42e 984 SUPERFAMILY SSF141868 735 983 3.14E-84 T 11-11-2016 IPR001633 EAL domain SHALO_RS06665 e26e7b87a838c8749f8a89f6c3aaf42e 984 SMART SM00267 548 720 2.8E-62 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS06665 e26e7b87a838c8749f8a89f6c3aaf42e 984 Gene3D G3DSA:3.30.450.20 227 330 1.3E-23 T 11-11-2016 SHALO_RS06665 e26e7b87a838c8749f8a89f6c3aaf42e 984 Gene3D G3DSA:3.30.450.20 70 222 1.5E-37 T 11-11-2016 SHALO_RS06665 e26e7b87a838c8749f8a89f6c3aaf42e 984 Gene3D G3DSA:3.30.70.270 561 724 1.6E-54 T 11-11-2016 SHALO_RS07665 0312c93e74ef7cb842f4e1724093fef1 192 TIGRFAM TIGR02469 CbiT: precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit 15 135 1.2E-34 T 11-11-2016 IPR014008 Cobalamin biosynthesis, precorrin-6Y methyltransferase, CbiT subunit GO:0008276|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.196|MetaCyc: PWY-2201|MetaCyc: PWY-7377 SHALO_RS07665 0312c93e74ef7cb842f4e1724093fef1 192 Pfam PF13847 Methyltransferase domain 32 107 3.3E-8 T 11-11-2016 IPR025714 Methyltransferase domain SHALO_RS07665 0312c93e74ef7cb842f4e1724093fef1 192 Gene3D G3DSA:3.40.50.150 8 190 1.1E-26 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS07665 0312c93e74ef7cb842f4e1724093fef1 192 SUPERFAMILY SSF53335 17 163 1.84E-24 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS00535 237c5feaee74fb11b919538d12f7ccf1 252 SUPERFAMILY SSF51366 5 251 2.12E-85 T 11-11-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 SHALO_RS00535 237c5feaee74fb11b919538d12f7ccf1 252 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 3 251 49.235 T 11-11-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 SHALO_RS00535 237c5feaee74fb11b919538d12f7ccf1 252 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 4 251 1.7E-113 T 11-11-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 SHALO_RS00535 237c5feaee74fb11b919538d12f7ccf1 252 Gene3D G3DSA:3.20.20.70 6 252 5.8E-108 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_RS00535 237c5feaee74fb11b919538d12f7ccf1 252 Pfam PF00977 Histidine biosynthesis protein 7 234 3.9E-92 T 11-11-2016 IPR006062 Histidine biosynthesis GO:0000105 SHALO_RS09210 f647aad6c8b0c4ed13f10bc650638086 93 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 29 90 2.1E-6 T 11-11-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain SHALO_RS14475 d78c3aaeb8a3e69990a873e804521a31 290 Gene3D G3DSA:3.40.190.10 118 234 8.9E-13 T 11-11-2016 SHALO_RS14475 d78c3aaeb8a3e69990a873e804521a31 290 TIGRFAM TIGR01098 3A0109s03R: phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein 31 250 2.5E-36 T 11-11-2016 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein GO:0043190|GO:0055085 SHALO_RS14475 d78c3aaeb8a3e69990a873e804521a31 290 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 52 274 4.5E-49 T 11-11-2016 SHALO_RS14475 d78c3aaeb8a3e69990a873e804521a31 290 SUPERFAMILY SSF53850 30 258 4.31E-35 T 11-11-2016 SHALO_RS05365 02e3f129c0da9b18f5dc3add4c02714a 488 SUPERFAMILY SSF103657 203 397 5.75E-6 T 11-11-2016 SHALO_RS05365 02e3f129c0da9b18f5dc3add4c02714a 488 Pfam PF13455 Meiotically up-regulated gene 113 387 463 4.4E-16 T 11-11-2016 SHALO_RS05365 02e3f129c0da9b18f5dc3add4c02714a 488 SMART SM00974 381 464 2.8E-33 T 11-11-2016 IPR018306 Bacteriophage T5, Orf172 DNA-binding SHALO_RS05365 02e3f129c0da9b18f5dc3add4c02714a 488 Pfam PF13250 Domain of unknown function (DUF4041) 211 266 5.7E-14 T 11-11-2016 IPR025280 Domain of unknown function DUF4041 SHALO_RS05210 7fce507a9469b461f2ee07fb14c88f3e 449 SUPERFAMILY SSF55073 37 188 2.98E-29 T 11-11-2016 IPR029787 Nucleotide cyclase SHALO_RS05210 7fce507a9469b461f2ee07fb14c88f3e 449 SMART SM00267 19 187 2.5E-9 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS05210 7fce507a9469b461f2ee07fb14c88f3e 449 SMART SM00052 197 448 1.2E-99 T 11-11-2016 IPR001633 EAL domain SHALO_RS05210 7fce507a9469b461f2ee07fb14c88f3e 449 Gene3D G3DSA:3.20.20.450 203 447 2.0E-90 T 11-11-2016 IPR001633 EAL domain SHALO_RS05210 7fce507a9469b461f2ee07fb14c88f3e 449 Pfam PF00563 EAL domain 203 443 3.3E-67 T 11-11-2016 IPR001633 EAL domain SHALO_RS05210 7fce507a9469b461f2ee07fb14c88f3e 449 Gene3D G3DSA:3.30.70.270 36 195 4.9E-33 T 11-11-2016 SHALO_RS05210 7fce507a9469b461f2ee07fb14c88f3e 449 Pfam PF00990 Diguanylate cyclase, GGDEF domain 36 183 2.1E-25 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS05210 7fce507a9469b461f2ee07fb14c88f3e 449 SUPERFAMILY SSF141868 203 446 2.75E-81 T 11-11-2016 IPR001633 EAL domain SHALO_RS05210 7fce507a9469b461f2ee07fb14c88f3e 449 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 36 185 3.8E-22 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS13965 b92fe7caf9bfae30573fabca85936d0d 263 Gene3D G3DSA:3.20.20.70 3 257 1.0E-50 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_RS13965 b92fe7caf9bfae30573fabca85936d0d 263 Hamap MF_00443 Thiazole synthase [thiG]. 4 258 41.929 T 11-11-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 SHALO_RS13965 b92fe7caf9bfae30573fabca85936d0d 263 SUPERFAMILY SSF110399 3 243 2.88E-81 T 11-11-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 SHALO_RS13965 b92fe7caf9bfae30573fabca85936d0d 263 Pfam PF05690 Thiazole biosynthesis protein ThiG 7 252 1.9E-101 T 11-11-2016 SHALO_RS14310 b284db743f58f7cc8d97e77624680eb7 231 Gene3D G3DSA:3.40.50.620 5 196 2.6E-37 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHALO_RS14310 b284db743f58f7cc8d97e77624680eb7 231 SUPERFAMILY SSF52402 5 189 4.74E-32 T 11-11-2016 SHALO_RS14310 b284db743f58f7cc8d97e77624680eb7 231 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 28 201 6.6E-30 T 11-11-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 Reactome: R-HSA-196843 SHALO_RS14310 b284db743f58f7cc8d97e77624680eb7 231 PIRSF PIRSF000857 1 231 1.1E-62 T 11-11-2016 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 SHALO_RS03985 3c8fb5c33edf1d02c331bfedf201fbab 941 Pfam PF01565 FAD binding domain 44 179 3.1E-26 T 11-11-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 SHALO_RS03985 3c8fb5c33edf1d02c331bfedf201fbab 941 Gene3D G3DSA:1.10.1060.10 511 631 7.0E-20 T 11-11-2016 SHALO_RS03985 3c8fb5c33edf1d02c331bfedf201fbab 941 Pfam PF02913 FAD linked oxidases, C-terminal domain 271 520 6.1E-53 T 11-11-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 SHALO_RS03985 3c8fb5c33edf1d02c331bfedf201fbab 941 Pfam PF02754 Cysteine-rich domain 712 805 6.7E-4 T 11-11-2016 IPR004017 Cysteine-rich domain SHALO_RS03985 3c8fb5c33edf1d02c331bfedf201fbab 941 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 602 613 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_RS03985 3c8fb5c33edf1d02c331bfedf201fbab 941 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 546 557 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_RS03985 3c8fb5c33edf1d02c331bfedf201fbab 941 Pfam PF13183 4Fe-4S dicluster domain 544 616 3.0E-10 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_RS03985 3c8fb5c33edf1d02c331bfedf201fbab 941 Gene3D G3DSA:3.30.465.10 99 185 4.3E-16 T 11-11-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 SHALO_RS03985 3c8fb5c33edf1d02c331bfedf201fbab 941 Gene3D G3DSA:3.30.465.10 219 267 4.3E-16 T 11-11-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 SHALO_RS03985 3c8fb5c33edf1d02c331bfedf201fbab 941 SUPERFAMILY SSF46548 498 628 1.15E-22 T 11-11-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 SHALO_RS03985 3c8fb5c33edf1d02c331bfedf201fbab 941 SUPERFAMILY SSF55103 272 527 4.09E-55 T 11-11-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 SHALO_RS03985 3c8fb5c33edf1d02c331bfedf201fbab 941 SUPERFAMILY SSF56176 9 267 1.34E-51 T 11-11-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 SHALO_RS03985 3c8fb5c33edf1d02c331bfedf201fbab 941 Gene3D G3DSA:3.30.43.10 8 96 1.3E-16 T 11-11-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 SHALO_RS03985 3c8fb5c33edf1d02c331bfedf201fbab 941 Gene3D G3DSA:1.10.45.10 482 510 2.9E-8 T 11-11-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 SHALO_RS07395 c27bfed87cbf05f67dbf076201774fd2 148 Pfam PF03948 Ribosomal protein L9, C-terminal domain 65 145 4.3E-23 T 11-11-2016 IPR020069 Ribosomal protein L9, C-terminal SHALO_RS07395 c27bfed87cbf05f67dbf076201774fd2 148 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 148 23.155 T 11-11-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_RS07395 c27bfed87cbf05f67dbf076201774fd2 148 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 46 1.5E-19 T 11-11-2016 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS07395 c27bfed87cbf05f67dbf076201774fd2 148 Gene3D G3DSA:3.40.5.10 1 51 1.3E-21 T 11-11-2016 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS07395 c27bfed87cbf05f67dbf076201774fd2 148 SUPERFAMILY SSF55658 1 55 1.17E-16 T 11-11-2016 IPR009027 Ribosomal protein L9/RNase H1, N-terminal SHALO_RS07395 c27bfed87cbf05f67dbf076201774fd2 148 SUPERFAMILY SSF55653 57 147 1.57E-22 T 11-11-2016 IPR020069 Ribosomal protein L9, C-terminal SHALO_RS07395 c27bfed87cbf05f67dbf076201774fd2 148 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 145 2.4E-40 T 11-11-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_RS07395 c27bfed87cbf05f67dbf076201774fd2 148 Gene3D G3DSA:3.10.430.100 61 146 6.9E-25 T 11-11-2016 IPR020069 Ribosomal protein L9, C-terminal SHALO_RS07395 c27bfed87cbf05f67dbf076201774fd2 148 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 11-11-2016 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS04850 c88f0189b6aefb58f0dabf7ffee80b96 186 SUPERFAMILY SSF89155 25 170 1.14E-25 T 11-11-2016 IPR020945 DMSO/Nitrate reductase chaperone SHALO_RS04850 c88f0189b6aefb58f0dabf7ffee80b96 186 Gene3D G3DSA:1.10.3480.10 9 160 4.7E-28 T 11-11-2016 IPR020945 DMSO/Nitrate reductase chaperone SHALO_RS04850 c88f0189b6aefb58f0dabf7ffee80b96 186 Pfam PF02613 Nitrate reductase delta subunit 27 150 8.1E-21 T 11-11-2016 IPR020945 DMSO/Nitrate reductase chaperone SHALO_RS14745 8d17efb0ec755e2dfa07d342c12fb70d 287 SUPERFAMILY SSF53850 4 265 1.33E-72 T 11-11-2016 SHALO_RS14745 8d17efb0ec755e2dfa07d342c12fb70d 287 Gene3D G3DSA:3.40.190.10 79 168 4.5E-5 T 11-11-2016 SHALO_RS14745 8d17efb0ec755e2dfa07d342c12fb70d 287 Pfam PF02621 Menaquinone biosynthesis 4 260 4.6E-74 T 11-11-2016 IPR003773 Menaquinone biosynthesis enzyme SHALO_RS14745 8d17efb0ec755e2dfa07d342c12fb70d 287 Hamap MF_00996 1,4-dihydroxy-6-naphtoate synthase [mqnD]. 3 267 35.513 T 11-11-2016 IPR030869 1,4-dihydroxy-6-naphtoate synthase GO:0009234|GO:0016829 SHALO_RS01240 8075b9be3e8a3240303de76becdcc482 334 SMART SM00859 2 138 3.2E-45 T 11-11-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 SHALO_RS01240 8075b9be3e8a3240303de76becdcc482 334 SUPERFAMILY SSF51735 1 167 8.14E-41 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS01240 8075b9be3e8a3240303de76becdcc482 334 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 3 138 6.5E-30 T 11-11-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 SHALO_RS01240 8075b9be3e8a3240303de76becdcc482 334 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 141 157 - T 11-11-2016 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 SHALO_RS01240 8075b9be3e8a3240303de76becdcc482 334 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 168 304 4.3E-14 T 11-11-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 SHALO_RS01240 8075b9be3e8a3240303de76becdcc482 334 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 1 328 36.734 T 11-11-2016 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 SHALO_RS01240 8075b9be3e8a3240303de76becdcc482 334 Gene3D G3DSA:3.40.50.720 1 152 3.5E-51 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS01240 8075b9be3e8a3240303de76becdcc482 334 Gene3D G3DSA:3.30.360.10 153 302 8.0E-47 T 11-11-2016 SHALO_RS01240 8075b9be3e8a3240303de76becdcc482 334 SUPERFAMILY SSF55347 146 302 3.38E-42 T 11-11-2016 SHALO_RS01240 8075b9be3e8a3240303de76becdcc482 334 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 2 334 2.2E-108 T 11-11-2016 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 SHALO_RS06260 cea15eea6f9ffc8c0498649c20f7a466 199 Gene3D G3DSA:3.30.1330.60 96 198 2.4E-26 T 11-11-2016 IPR006665 OmpA-like domain SHALO_RS06260 cea15eea6f9ffc8c0498649c20f7a466 199 Pfam PF00691 OmpA family 97 192 5.5E-17 T 11-11-2016 IPR006665 OmpA-like domain SHALO_RS06260 cea15eea6f9ffc8c0498649c20f7a466 199 PRINTS PR01021 OMPA domain signature 143 159 3.2E-10 T 11-11-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SHALO_RS06260 cea15eea6f9ffc8c0498649c20f7a466 199 PRINTS PR01021 OMPA domain signature 98 120 3.2E-10 T 11-11-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SHALO_RS06260 cea15eea6f9ffc8c0498649c20f7a466 199 PRINTS PR01021 OMPA domain signature 128 143 3.2E-10 T 11-11-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SHALO_RS06260 cea15eea6f9ffc8c0498649c20f7a466 199 SUPERFAMILY SSF103088 92 198 1.7E-26 T 11-11-2016 IPR006665 OmpA-like domain SHALO_RS03470 f525ca4fe7b0b822d57902965d3be04a 167 Gene3D G3DSA:3.30.1330.60 58 166 9.4E-31 T 11-11-2016 IPR006665 OmpA-like domain SHALO_RS03470 f525ca4fe7b0b822d57902965d3be04a 167 SUPERFAMILY SSF103088 59 167 3.92E-29 T 11-11-2016 IPR006665 OmpA-like domain SHALO_RS03470 f525ca4fe7b0b822d57902965d3be04a 167 Pfam PF00691 OmpA family 62 159 3.7E-17 T 11-11-2016 IPR006665 OmpA-like domain SHALO_RS03470 f525ca4fe7b0b822d57902965d3be04a 167 PRINTS PR01021 OMPA domain signature 110 126 5.9E-15 T 11-11-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SHALO_RS03470 f525ca4fe7b0b822d57902965d3be04a 167 PRINTS PR01021 OMPA domain signature 95 110 5.9E-15 T 11-11-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SHALO_RS03470 f525ca4fe7b0b822d57902965d3be04a 167 PRINTS PR01021 OMPA domain signature 63 85 5.9E-15 T 11-11-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SHALO_RS14885 f7c5cda92af206e20f11b6e852a7016b 95 Gene3D G3DSA:3.30.70.900 1 94 2.6E-27 T 11-11-2016 SHALO_RS14885 f7c5cda92af206e20f11b6e852a7016b 95 Pfam PF07876 Stress responsive A/B Barrel Domain 2 94 2.3E-25 T 11-11-2016 IPR013097 Stress responsive alpha-beta barrel SHALO_RS14885 f7c5cda92af206e20f11b6e852a7016b 95 SMART SM00886 2 95 1.4E-30 T 11-11-2016 IPR013097 Stress responsive alpha-beta barrel SHALO_RS14885 f7c5cda92af206e20f11b6e852a7016b 95 SUPERFAMILY SSF54909 1 95 2.5E-23 T 11-11-2016 IPR011008 Dimeric alpha-beta barrel SHALO_RS10880 749c3dacf517860b6f696425ef7de6ee 406 Pfam PF02687 FtsX-like permease family 287 399 1.7E-22 T 11-11-2016 IPR003838 ABC transporter permease protein domain GO:0016020 SHALO_RS10880 749c3dacf517860b6f696425ef7de6ee 406 Pfam PF12704 MacB-like periplasmic core domain 20 244 1.5E-38 T 11-11-2016 IPR025857 MacB-like periplasmic core domain SHALO_RS04270 34475cb3df8804b2d0110e71322c667b 239 Hamap MF_01220_B Uridylate kinase [pyrH]. 2 237 41.841 T 11-11-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 SHALO_RS04270 34475cb3df8804b2d0110e71322c667b 239 Gene3D G3DSA:3.40.1160.10 2 230 5.9E-76 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase SHALO_RS04270 34475cb3df8804b2d0110e71322c667b 239 SUPERFAMILY SSF53633 3 230 1.03E-65 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase SHALO_RS04270 34475cb3df8804b2d0110e71322c667b 239 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 5 232 3.3E-95 T 11-11-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 SHALO_RS04270 34475cb3df8804b2d0110e71322c667b 239 PIRSF PIRSF005650 1 238 2.1E-87 T 11-11-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 SHALO_RS04270 34475cb3df8804b2d0110e71322c667b 239 Pfam PF00696 Amino acid kinase family 5 215 3.6E-33 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase SHALO_RS02215 1afe44d5ae890950fc66d13384ce15da 786 ProSitePatterns PS60003 Phosphoketolase signature 2. 155 173 - T 11-11-2016 IPR019789 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, thiamine diphosphate binding site GO:0005975|GO:0016832 SHALO_RS02215 1afe44d5ae890950fc66d13384ce15da 786 Hamap MF_01403 Probable phosphoketolase. 3 786 41.086 T 11-11-2016 IPR023962 Probable phosphoketolase SHALO_RS02215 1afe44d5ae890950fc66d13384ce15da 786 SUPERFAMILY SSF52518 3 366 2.36E-76 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold SHALO_RS02215 1afe44d5ae890950fc66d13384ce15da 786 Gene3D G3DSA:3.40.50.970 2 363 7.7E-20 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold SHALO_RS02215 1afe44d5ae890950fc66d13384ce15da 786 Pfam PF09363 XFP C-terminal domain 583 784 4.5E-92 T 11-11-2016 IPR018969 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, C-terminal GO:0005975|GO:0016832 SHALO_RS02215 1afe44d5ae890950fc66d13384ce15da 786 PIRSF PIRSF017245 1 786 0.0 T 11-11-2016 IPR005593 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase GO:0005975|GO:0016832 SHALO_RS02215 1afe44d5ae890950fc66d13384ce15da 786 Pfam PF09364 XFP N-terminal domain 6 383 2.2E-195 T 11-11-2016 IPR018970 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, N-terminal SHALO_RS02215 1afe44d5ae890950fc66d13384ce15da 786 Pfam PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase 397 572 2.1E-89 T 11-11-2016 IPR005593 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase GO:0005975|GO:0016832 SHALO_RS02215 1afe44d5ae890950fc66d13384ce15da 786 ProSitePatterns PS60002 Phosphoketolase signature 1. 142 148 - T 11-11-2016 IPR019790 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, conserved site GO:0005975|GO:0016832 SHALO_RS02215 1afe44d5ae890950fc66d13384ce15da 786 SUPERFAMILY SSF52518 374 585 1.41E-23 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold SHALO_RS08410 3233219db8e8c60f912b62b7b59669e5 666 Pfam PF10442 FIST C domain 286 398 3.0E-12 T 11-11-2016 IPR019494 FIST, C-domain SHALO_RS08410 3233219db8e8c60f912b62b7b59669e5 666 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 501 638 5.6E-33 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SHALO_RS08410 3233219db8e8c60f912b62b7b59669e5 666 SUPERFAMILY SSF58104 456 653 7.32E-46 T 11-11-2016 SHALO_RS08410 3233219db8e8c60f912b62b7b59669e5 666 Pfam PF08495 FIST N domain 45 253 3.6E-20 T 11-11-2016 IPR013702 FIST domain, N-terminal SHALO_RS08410 3233219db8e8c60f912b62b7b59669e5 666 SMART SM00897 42 267 8.7E-32 T 11-11-2016 IPR013702 FIST domain, N-terminal SHALO_RS08410 3233219db8e8c60f912b62b7b59669e5 666 SMART SM01204 274 401 5.9E-20 T 11-11-2016 IPR019494 FIST, C-domain SHALO_RS08410 3233219db8e8c60f912b62b7b59669e5 666 SMART SM00283 443 661 3.0E-25 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SHALO_RS08410 3233219db8e8c60f912b62b7b59669e5 666 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 533 560 5.1E-18 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SHALO_RS08410 3233219db8e8c60f912b62b7b59669e5 666 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 562 591 5.1E-18 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SHALO_RS08410 3233219db8e8c60f912b62b7b59669e5 666 Gene3D G3DSA:1.10.287.950 457 650 2.6E-44 T 11-11-2016 SHALO_RS05505 936af52f32dc3e8f2c262a5dedc8d97e 182 Pfam PF00857 Isochorismatase family 8 157 3.7E-26 T 11-11-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 SHALO_RS05505 936af52f32dc3e8f2c262a5dedc8d97e 182 SUPERFAMILY SSF52499 2 180 1.05E-46 T 11-11-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 SHALO_RS05505 936af52f32dc3e8f2c262a5dedc8d97e 182 Gene3D G3DSA:3.40.50.850 1 181 9.1E-56 T 11-11-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 SHALO_RS06760 63236c69db8e2d1b5d45dadfcdee63f3 1043 SUPERFAMILY SSF82693 138 183 9.42E-26 T 11-11-2016 SHALO_RS06760 63236c69db8e2d1b5d45dadfcdee63f3 1043 SUPERFAMILY SSF82693 276 332 9.42E-26 T 11-11-2016 SHALO_RS06760 63236c69db8e2d1b5d45dadfcdee63f3 1043 Gene3D G3DSA:3.30.70.1430 567 671 1.2E-27 T 11-11-2016 SHALO_RS06760 63236c69db8e2d1b5d45dadfcdee63f3 1043 SUPERFAMILY SSF82693 39 133 4.19E-26 T 11-11-2016 SHALO_RS06760 63236c69db8e2d1b5d45dadfcdee63f3 1043 SUPERFAMILY SSF82693 565 671 2.43E-26 T 11-11-2016 SHALO_RS06760 63236c69db8e2d1b5d45dadfcdee63f3 1043 PRINTS PR00702 Acriflavin resistance protein family signature 37 55 7.9E-98 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SHALO_RS06760 63236c69db8e2d1b5d45dadfcdee63f3 1043 PRINTS PR00702 Acriflavin resistance protein family signature 365 386 7.9E-98 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SHALO_RS06760 63236c69db8e2d1b5d45dadfcdee63f3 1043 PRINTS PR00702 Acriflavin resistance protein family signature 9 33 7.9E-98 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SHALO_RS06760 63236c69db8e2d1b5d45dadfcdee63f3 1043 PRINTS PR00702 Acriflavin resistance protein family signature 338 361 7.9E-98 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SHALO_RS06760 63236c69db8e2d1b5d45dadfcdee63f3 1043 PRINTS PR00702 Acriflavin resistance protein family signature 393 417 7.9E-98 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SHALO_RS06760 63236c69db8e2d1b5d45dadfcdee63f3 1043 PRINTS PR00702 Acriflavin resistance protein family signature 473 496 7.9E-98 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SHALO_RS06760 63236c69db8e2d1b5d45dadfcdee63f3 1043 PRINTS PR00702 Acriflavin resistance protein family signature 621 635 7.9E-98 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SHALO_RS06760 63236c69db8e2d1b5d45dadfcdee63f3 1043 PRINTS PR00702 Acriflavin resistance protein family signature 448 471 7.9E-98 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SHALO_RS06760 63236c69db8e2d1b5d45dadfcdee63f3 1043 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 7.9E-98 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SHALO_RS06760 63236c69db8e2d1b5d45dadfcdee63f3 1043 Pfam PF00873 AcrB/AcrD/AcrF family 2 1025 0.0 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SHALO_RS06760 63236c69db8e2d1b5d45dadfcdee63f3 1043 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 2 1036 0.0 T 11-11-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 SHALO_RS06760 63236c69db8e2d1b5d45dadfcdee63f3 1043 Gene3D G3DSA:3.30.2090.10 183 277 6.0E-28 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SHALO_RS06760 63236c69db8e2d1b5d45dadfcdee63f3 1043 SUPERFAMILY SSF82714 722 807 1.57E-21 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SHALO_RS06760 63236c69db8e2d1b5d45dadfcdee63f3 1043 SUPERFAMILY SSF82866 298 501 8.11E-50 T 11-11-2016 SHALO_RS06760 63236c69db8e2d1b5d45dadfcdee63f3 1043 Gene3D G3DSA:1.10.3850.10 815 1027 1.7E-56 T 11-11-2016 SHALO_RS06760 63236c69db8e2d1b5d45dadfcdee63f3 1043 Gene3D G3DSA:1.10.3850.10 282 502 1.2E-59 T 11-11-2016 SHALO_RS06760 63236c69db8e2d1b5d45dadfcdee63f3 1043 Gene3D G3DSA:3.30.2090.10 722 807 4.0E-24 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SHALO_RS06760 63236c69db8e2d1b5d45dadfcdee63f3 1043 SUPERFAMILY SSF82714 184 274 2.09E-21 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SHALO_RS06760 63236c69db8e2d1b5d45dadfcdee63f3 1043 SUPERFAMILY SSF82693 808 857 2.44E-26 T 11-11-2016 SHALO_RS06760 63236c69db8e2d1b5d45dadfcdee63f3 1043 SUPERFAMILY SSF82693 673 721 2.44E-26 T 11-11-2016 SHALO_RS06760 63236c69db8e2d1b5d45dadfcdee63f3 1043 SUPERFAMILY SSF82866 831 1026 1.83E-46 T 11-11-2016 SHALO_RS06760 63236c69db8e2d1b5d45dadfcdee63f3 1043 Gene3D G3DSA:3.30.70.1430 39 138 2.9E-31 T 11-11-2016 SHALO_RS08070 2b786fac713c65aecc8448f2e5c50e9f 316 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 2 315 32.671 T 11-11-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 SHALO_RS08070 2b786fac713c65aecc8448f2e5c50e9f 316 SUPERFAMILY SSF51161 28 305 2.72E-73 T 11-11-2016 IPR011004 Trimeric LpxA-like SHALO_RS08070 2b786fac713c65aecc8448f2e5c50e9f 316 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 119 147 - T 11-11-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 SHALO_RS08070 2b786fac713c65aecc8448f2e5c50e9f 316 Gene3D G3DSA:2.160.10.10 105 296 3.4E-43 T 11-11-2016 SHALO_RS08070 2b786fac713c65aecc8448f2e5c50e9f 316 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 6 314 8.9E-111 T 11-11-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 SHALO_RS08070 2b786fac713c65aecc8448f2e5c50e9f 316 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 134 168 1.1E-9 T 11-11-2016 IPR001451 Hexapeptide repeat SHALO_RS08070 2b786fac713c65aecc8448f2e5c50e9f 316 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 212 246 1.2E-6 T 11-11-2016 IPR001451 Hexapeptide repeat SHALO_RS08070 2b786fac713c65aecc8448f2e5c50e9f 316 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 18 86 4.7E-19 T 11-11-2016 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 SHALO_RS06530 3792488e97eb09f5f03c0cdaa8b3dce9 164 SUPERFAMILY SSF143243 27 137 1.19E-21 T 11-11-2016 SHALO_RS06530 3792488e97eb09f5f03c0cdaa8b3dce9 164 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 38 139 1.4E-17 T 11-11-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS06530 3792488e97eb09f5f03c0cdaa8b3dce9 164 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 88 126 3.0E-12 T 11-11-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS11075 bef12fe857067c2845c674e1f29df422 203 Pfam PF00117 Glutamine amidotransferase class-I 4 201 1.1E-21 T 11-11-2016 IPR017926 Glutamine amidotransferase SHALO_RS11075 bef12fe857067c2845c674e1f29df422 203 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 2 202 5.6E-72 T 11-11-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 SHALO_RS11075 bef12fe857067c2845c674e1f29df422 203 Gene3D G3DSA:3.40.50.880 1 203 3.0E-82 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like SHALO_RS11075 bef12fe857067c2845c674e1f29df422 203 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 1 203 36.275 T 11-11-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 SHALO_RS11075 bef12fe857067c2845c674e1f29df422 203 PIRSF PIRSF000495 1 203 3.7E-74 T 11-11-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 SHALO_RS11075 bef12fe857067c2845c674e1f29df422 203 SUPERFAMILY SSF52317 2 202 1.53E-57 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like SHALO_RS08030 730bad8e934895f5220c2d702cd88cd0 259 Gene3D G3DSA:3.20.20.70 1 258 3.2E-95 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_RS08030 730bad8e934895f5220c2d702cd88cd0 259 SUPERFAMILY SSF63892 2 258 1.27E-83 T 11-11-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 SHALO_RS08030 730bad8e934895f5220c2d702cd88cd0 259 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 3 257 5.7E-93 T 11-11-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 SHALO_RS08030 730bad8e934895f5220c2d702cd88cd0 259 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 259 97.16 T 11-11-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 SHALO_RS08030 730bad8e934895f5220c2d702cd88cd0 259 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 3 258 1.8E-88 T 11-11-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 SHALO_RS06150 5756229e428b31c36932b36fdf8c6aed 170 SUPERFAMILY SSF55729 1 162 6.98E-35 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase SHALO_RS06150 5756229e428b31c36932b36fdf8c6aed 170 Gene3D G3DSA:3.40.630.30 1 163 1.0E-42 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase SHALO_RS06150 5756229e428b31c36932b36fdf8c6aed 170 Pfam PF13420 Acetyltransferase (GNAT) domain 2 153 1.7E-24 T 11-11-2016 SHALO_RS02820 bbac8f0f98e3d7fc5899753ca1a9e957 355 ProSitePatterns PS01127 Elongation factor Ts signature 2. 77 87 - T 11-11-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 SHALO_RS02820 bbac8f0f98e3d7fc5899753ca1a9e957 355 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 355 3.2E-101 T 11-11-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 SHALO_RS02820 bbac8f0f98e3d7fc5899753ca1a9e957 355 SUPERFAMILY SSF54713 150 214 8.72E-29 T 11-11-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 SHALO_RS02820 bbac8f0f98e3d7fc5899753ca1a9e957 355 SUPERFAMILY SSF54713 257 337 8.72E-29 T 11-11-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 SHALO_RS02820 bbac8f0f98e3d7fc5899753ca1a9e957 355 Gene3D G3DSA:1.10.8.10 2 55 4.9E-26 T 11-11-2016 SHALO_RS02820 bbac8f0f98e3d7fc5899753ca1a9e957 355 SUPERFAMILY SSF46934 4 55 1.62E-17 T 11-11-2016 IPR009060 UBA-like GO:0005515 SHALO_RS02820 bbac8f0f98e3d7fc5899753ca1a9e957 355 Pfam PF00889 Elongation factor TS 73 337 3.5E-66 T 11-11-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 SHALO_RS02820 bbac8f0f98e3d7fc5899753ca1a9e957 355 Gene3D G3DSA:3.30.479.20 153 197 1.2E-25 T 11-11-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 SHALO_RS02820 bbac8f0f98e3d7fc5899753ca1a9e957 355 Gene3D G3DSA:3.30.479.20 294 336 1.2E-25 T 11-11-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 SHALO_RS02820 bbac8f0f98e3d7fc5899753ca1a9e957 355 Hamap MF_00050 Elongation factor Ts [tsf]. 1 354 60.724 T 11-11-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 SHALO_RS02820 bbac8f0f98e3d7fc5899753ca1a9e957 355 SUPERFAMILY SSF54713 56 146 3.14E-16 T 11-11-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 SHALO_RS02820 bbac8f0f98e3d7fc5899753ca1a9e957 355 Gene3D G3DSA:3.30.479.20 57 149 2.0E-13 T 11-11-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 SHALO_RS02820 bbac8f0f98e3d7fc5899753ca1a9e957 355 Gene3D G3DSA:1.10.286.20 250 287 2.8E-5 T 11-11-2016 SHALO_RS02820 bbac8f0f98e3d7fc5899753ca1a9e957 355 ProSitePatterns PS01126 Elongation factor Ts signature 1. 12 27 - T 11-11-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 SHALO_RS01475 edfa18e2ccc9bd767bcac733885dda7d 294 Pfam PF00288 GHMP kinases N terminal domain 77 137 3.6E-10 T 11-11-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 SHALO_RS01475 edfa18e2ccc9bd767bcac733885dda7d 294 Gene3D G3DSA:3.30.230.10 1 148 2.9E-46 T 11-11-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SHALO_RS01475 edfa18e2ccc9bd767bcac733885dda7d 294 SUPERFAMILY SSF54211 2 141 4.17E-26 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SHALO_RS01475 edfa18e2ccc9bd767bcac733885dda7d 294 PIRSF PIRSF000676 1 294 1.9E-81 T 11-11-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 SHALO_RS01475 edfa18e2ccc9bd767bcac733885dda7d 294 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 83 94 - T 11-11-2016 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 SHALO_RS01475 edfa18e2ccc9bd767bcac733885dda7d 294 Hamap MF_00384 Homoserine kinase [thrB]. 1 291 28.551 T 11-11-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 SHALO_RS01475 edfa18e2ccc9bd767bcac733885dda7d 294 SUPERFAMILY SSF55060 158 274 2.67E-29 T 11-11-2016 IPR013750 GHMP kinase, C-terminal domain SHALO_RS01475 edfa18e2ccc9bd767bcac733885dda7d 294 PRINTS PR00958 Homoserine kinase signature 163 180 8.0E-31 T 11-11-2016 SHALO_RS01475 edfa18e2ccc9bd767bcac733885dda7d 294 PRINTS PR00958 Homoserine kinase signature 124 137 8.0E-31 T 11-11-2016 SHALO_RS01475 edfa18e2ccc9bd767bcac733885dda7d 294 PRINTS PR00958 Homoserine kinase signature 242 257 8.0E-31 T 11-11-2016 SHALO_RS01475 edfa18e2ccc9bd767bcac733885dda7d 294 PRINTS PR00958 Homoserine kinase signature 8 23 8.0E-31 T 11-11-2016 SHALO_RS01475 edfa18e2ccc9bd767bcac733885dda7d 294 PRINTS PR00958 Homoserine kinase signature 90 105 8.0E-31 T 11-11-2016 SHALO_RS01475 edfa18e2ccc9bd767bcac733885dda7d 294 TIGRFAM TIGR00191 thrB: homoserine kinase 1 293 1.9E-82 T 11-11-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 SHALO_RS01475 edfa18e2ccc9bd767bcac733885dda7d 294 Gene3D G3DSA:3.30.70.890 157 287 1.8E-34 T 11-11-2016 IPR013750 GHMP kinase, C-terminal domain SHALO_RS11700 32f903f8e89e5669ecca82eea929d56a 402 SUPERFAMILY SSF118215 13 396 4.58E-88 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 SHALO_RS11700 32f903f8e89e5669ecca82eea929d56a 402 Gene3D G3DSA:1.10.3860.10 6 395 2.0E-76 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 SHALO_RS11700 32f903f8e89e5669ecca82eea929d56a 402 PRINTS PR00173 Glutamate-aspartate symporter signature 219 238 2.8E-13 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 SHALO_RS11700 32f903f8e89e5669ecca82eea929d56a 402 PRINTS PR00173 Glutamate-aspartate symporter signature 11 31 2.8E-13 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 SHALO_RS11700 32f903f8e89e5669ecca82eea929d56a 402 PRINTS PR00173 Glutamate-aspartate symporter signature 321 340 2.8E-13 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 SHALO_RS11700 32f903f8e89e5669ecca82eea929d56a 402 PRINTS PR00173 Glutamate-aspartate symporter signature 184 203 2.8E-13 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 SHALO_RS11700 32f903f8e89e5669ecca82eea929d56a 402 PRINTS PR00173 Glutamate-aspartate symporter signature 286 312 2.8E-13 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 SHALO_RS11700 32f903f8e89e5669ecca82eea929d56a 402 Hamap MF_01582 Serine/threonine transporter SstT [sstT]. 1 402 34.786 T 11-11-2016 IPR023025 Serine/threonine transporter SstT GO:0015293|GO:0015826|GO:0032329 SHALO_RS11700 32f903f8e89e5669ecca82eea929d56a 402 Pfam PF00375 Sodium:dicarboxylate symporter family 13 394 5.3E-59 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 SHALO_RS09885 611b72e29f41a7ea124a5e32a6de12cd 141 Pfam PF03459 TOBE domain 76 137 4.8E-16 T 11-11-2016 IPR005116 Transport-associated OB, type 1 SHALO_RS09885 611b72e29f41a7ea124a5e32a6de12cd 141 Pfam PF03459 TOBE domain 4 65 4.4E-12 T 11-11-2016 IPR005116 Transport-associated OB, type 1 SHALO_RS09885 611b72e29f41a7ea124a5e32a6de12cd 141 Gene3D G3DSA:2.40.50.100 72 140 1.1E-24 T 11-11-2016 SHALO_RS09885 611b72e29f41a7ea124a5e32a6de12cd 141 Gene3D G3DSA:2.40.50.100 1 68 1.6E-25 T 11-11-2016 SHALO_RS09885 611b72e29f41a7ea124a5e32a6de12cd 141 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 75 140 3.9E-20 T 11-11-2016 IPR004606 Molybdenum-pterin binding GO:0006810|GO:0030151 SHALO_RS09885 611b72e29f41a7ea124a5e32a6de12cd 141 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 1 68 1.9E-20 T 11-11-2016 IPR004606 Molybdenum-pterin binding GO:0006810|GO:0030151 SHALO_RS09885 611b72e29f41a7ea124a5e32a6de12cd 141 SUPERFAMILY SSF50331 74 140 1.25E-18 T 11-11-2016 IPR008995 Molybdate/tungstate binding, C-terminal SHALO_RS09885 611b72e29f41a7ea124a5e32a6de12cd 141 SUPERFAMILY SSF50331 1 68 7.53E-19 T 11-11-2016 IPR008995 Molybdate/tungstate binding, C-terminal SHALO_RS03995 5afabfa18a11249842319046cc9e9441 604 Pfam PF00682 HMGL-like 7 280 4.4E-15 T 11-11-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 SHALO_RS03995 5afabfa18a11249842319046cc9e9441 604 SUPERFAMILY SSF51569 3 296 2.2E-55 T 11-11-2016 SHALO_RS03995 5afabfa18a11249842319046cc9e9441 604 Gene3D G3DSA:2.40.50.100 533 604 1.1E-23 T 11-11-2016 SHALO_RS03995 5afabfa18a11249842319046cc9e9441 604 SUPERFAMILY SSF89000 308 466 3.33E-37 T 11-11-2016 SHALO_RS03995 5afabfa18a11249842319046cc9e9441 604 Pfam PF02436 Conserved carboxylase domain 307 495 1.9E-39 T 11-11-2016 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 SHALO_RS03995 5afabfa18a11249842319046cc9e9441 604 SUPERFAMILY SSF51230 531 604 1.23E-20 T 11-11-2016 IPR011053 Single hybrid motif SHALO_RS03995 5afabfa18a11249842319046cc9e9441 604 Pfam PF00364 Biotin-requiring enzyme 539 604 3.4E-19 T 11-11-2016 IPR000089 Biotin/lipoyl attachment SHALO_RS03995 5afabfa18a11249842319046cc9e9441 604 Gene3D G3DSA:3.20.20.70 2 292 1.1E-69 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_RS03995 5afabfa18a11249842319046cc9e9441 604 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 561 578 - T 11-11-2016 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 SHALO_RS07020 5a3d9ad158761cb87b9e0c1f701a3368 562 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 286 306 - T 11-11-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 SHALO_RS07020 5a3d9ad158761cb87b9e0c1f701a3368 562 TIGRFAM TIGR03904 SAM_YgiQ: uncharacterized radical SAM protein YgiQ 1 549 1.1E-237 T 11-11-2016 IPR022946 Uncharacterised protein family UPF0313 SHALO_RS07020 5a3d9ad158761cb87b9e0c1f701a3368 562 Pfam PF08497 Radical SAM N-terminal 1 285 9.0E-113 T 11-11-2016 IPR013704 Uncharacterised protein family UPF0313, N-terminal SHALO_RS07020 5a3d9ad158761cb87b9e0c1f701a3368 562 SMART SM00729 282 536 5.9E-5 T 11-11-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 SHALO_RS07020 5a3d9ad158761cb87b9e0c1f701a3368 562 Gene3D G3DSA:3.80.30.20 282 547 2.0E-40 T 11-11-2016 IPR023404 Radical SAM, alpha/beta horseshoe SHALO_RS07020 5a3d9ad158761cb87b9e0c1f701a3368 562 SUPERFAMILY SSF102114 286 348 2.35E-12 T 11-11-2016 SHALO_RS07020 5a3d9ad158761cb87b9e0c1f701a3368 562 SUPERFAMILY SSF102114 378 529 2.35E-12 T 11-11-2016 SHALO_RS07020 5a3d9ad158761cb87b9e0c1f701a3368 562 Pfam PF04055 Radical SAM superfamily 287 494 5.2E-17 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SHALO_RS11970 eb85ed32b37cf81500af8443859f4dd4 282 PIRSF PIRSF000006 11 282 3.1E-59 T 11-11-2016 IPR004678 Cytochrome c oxidase cbb3-type, subunit III SHALO_RS11970 eb85ed32b37cf81500af8443859f4dd4 282 SUPERFAMILY SSF46626 60 191 9.61E-17 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS11970 eb85ed32b37cf81500af8443859f4dd4 282 Gene3D G3DSA:1.10.760.10 65 193 3.7E-17 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS11970 eb85ed32b37cf81500af8443859f4dd4 282 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 117 189 7.5E-7 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS11970 eb85ed32b37cf81500af8443859f4dd4 282 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 205 277 6.8E-8 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS11970 eb85ed32b37cf81500af8443859f4dd4 282 SUPERFAMILY SSF46626 199 280 5.28E-14 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS11970 eb85ed32b37cf81500af8443859f4dd4 282 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 41 88 2.8E-16 T 11-11-2016 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal SHALO_RS11970 eb85ed32b37cf81500af8443859f4dd4 282 Gene3D G3DSA:1.10.760.10 198 280 9.9E-15 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS09045 e1e2fd1e589e4f7707870311109fe94b 529 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 327 527 2.4E-31 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SHALO_RS09045 e1e2fd1e589e4f7707870311109fe94b 529 SMART SM00283 267 528 2.4E-28 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SHALO_RS09045 e1e2fd1e589e4f7707870311109fe94b 529 Gene3D G3DSA:1.10.287.950 281 491 2.2E-43 T 11-11-2016 SHALO_RS09045 e1e2fd1e589e4f7707870311109fe94b 529 SUPERFAMILY SSF58104 220 528 4.58E-57 T 11-11-2016 SHALO_RS09045 e1e2fd1e589e4f7707870311109fe94b 529 Pfam PF00672 HAMP domain 180 248 7.5E-11 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SHALO_RS09045 e1e2fd1e589e4f7707870311109fe94b 529 SMART SM00304 198 252 9.1E-9 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SHALO_RS07250 e4233029afcd5946260de460dc3973b9 297 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 8 292 6.7E-106 T 11-11-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 SHALO_RS07250 e4233029afcd5946260de460dc3973b9 297 Gene3D G3DSA:3.20.20.70 2 293 8.3E-104 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_RS07250 e4233029afcd5946260de460dc3973b9 297 PIRSF PIRSF001365 1 295 1.0E-83 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SHALO_RS07250 e4233029afcd5946260de460dc3973b9 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 37 58 1.4E-34 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SHALO_RS07250 e4233029afcd5946260de460dc3973b9 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 74 92 1.4E-34 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SHALO_RS07250 e4233029afcd5946260de460dc3973b9 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 106 122 1.4E-34 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SHALO_RS07250 e4233029afcd5946260de460dc3973b9 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 131 148 1.4E-34 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SHALO_RS07250 e4233029afcd5946260de460dc3973b9 297 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 4 291 62.531 T 11-11-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 SHALO_RS07250 e4233029afcd5946260de460dc3973b9 297 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 136 167 - T 11-11-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 SHALO_RS07250 e4233029afcd5946260de460dc3973b9 297 SMART SM01130 4 293 1.4E-129 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SHALO_RS07250 e4233029afcd5946260de460dc3973b9 297 SUPERFAMILY SSF51569 5 292 4.81E-93 T 11-11-2016 SHALO_RS07250 e4233029afcd5946260de460dc3973b9 297 Pfam PF00701 Dihydrodipicolinate synthetase family 5 291 3.2E-88 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SHALO_RS05005 de28b55729a5362dcba72f04d6dba202 141 Gene3D G3DSA:1.10.10.10 8 140 1.5E-32 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS05005 de28b55729a5362dcba72f04d6dba202 141 SUPERFAMILY SSF46785 8 140 1.62E-27 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS05005 de28b55729a5362dcba72f04d6dba202 141 Pfam PF01047 MarR family 40 90 3.1E-11 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SHALO_RS05005 de28b55729a5362dcba72f04d6dba202 141 PRINTS PR00598 Bacterial regulatory protein MarR family signature 67 82 6.4E-11 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SHALO_RS05005 de28b55729a5362dcba72f04d6dba202 141 PRINTS PR00598 Bacterial regulatory protein MarR family signature 86 102 6.4E-11 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SHALO_RS05005 de28b55729a5362dcba72f04d6dba202 141 PRINTS PR00598 Bacterial regulatory protein MarR family signature 116 136 6.4E-11 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SHALO_RS05005 de28b55729a5362dcba72f04d6dba202 141 PRINTS PR00598 Bacterial regulatory protein MarR family signature 50 66 6.4E-11 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SHALO_RS05005 de28b55729a5362dcba72f04d6dba202 141 SMART SM00347 26 126 6.0E-17 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SHALO_RS14945 5ea1c99b5771e6d1c5ce6e17c42b244a 394 SMART SM00887 40 260 7.1E-6 T 11-11-2016 IPR019020 Cytochrome c-552/DMSO reductase-like, haem-binding domain GO:0020037 SHALO_RS14945 5ea1c99b5771e6d1c5ce6e17c42b244a 394 Pfam PF00034 Cytochrome c 286 389 1.2E-11 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS14945 5ea1c99b5771e6d1c5ce6e17c42b244a 394 Gene3D G3DSA:1.10.760.10 276 389 4.6E-14 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS14945 5ea1c99b5771e6d1c5ce6e17c42b244a 394 SUPERFAMILY SSF46626 276 389 2.29E-14 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS14945 5ea1c99b5771e6d1c5ce6e17c42b244a 394 Pfam PF09459 Ethylbenzene dehydrogenase 41 258 1.4E-18 T 11-11-2016 IPR019020 Cytochrome c-552/DMSO reductase-like, haem-binding domain GO:0020037 SHALO_RS06455 b7473403d0ec29a6d6121f251dbd8539 384 PRINTS PR00344 Bacterial sensor protein C-terminal signature 308 322 2.8E-5 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS06455 b7473403d0ec29a6d6121f251dbd8539 384 PRINTS PR00344 Bacterial sensor protein C-terminal signature 339 357 2.8E-5 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS06455 b7473403d0ec29a6d6121f251dbd8539 384 PRINTS PR00344 Bacterial sensor protein C-terminal signature 363 376 2.8E-5 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS06455 b7473403d0ec29a6d6121f251dbd8539 384 PRINTS PR00344 Bacterial sensor protein C-terminal signature 326 336 2.8E-5 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS06455 b7473403d0ec29a6d6121f251dbd8539 384 SUPERFAMILY SSF47384 166 227 2.35E-5 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS06455 b7473403d0ec29a6d6121f251dbd8539 384 SMART SM00387 275 379 7.0E-24 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS06455 b7473403d0ec29a6d6121f251dbd8539 384 Gene3D G3DSA:1.10.287.130 169 208 9.4E-4 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS06455 b7473403d0ec29a6d6121f251dbd8539 384 Gene3D G3DSA:3.30.565.10 238 380 7.3E-28 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS06455 b7473403d0ec29a6d6121f251dbd8539 384 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 276 378 1.1E-17 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS06455 b7473403d0ec29a6d6121f251dbd8539 384 SUPERFAMILY SSF55874 238 378 1.13E-28 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS06095 217803d73fd964c778bbd47fd0660333 171 SUPERFAMILY SSF47240 1 154 4.07E-37 T 11-11-2016 IPR009078 Ferritin-like superfamily SHALO_RS06095 217803d73fd964c778bbd47fd0660333 171 PRINTS PR00601 Bacterioferritin signature 106 126 2.9E-10 T 11-11-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 SHALO_RS06095 217803d73fd964c778bbd47fd0660333 171 PRINTS PR00601 Bacterioferritin signature 43 63 2.9E-10 T 11-11-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 SHALO_RS06095 217803d73fd964c778bbd47fd0660333 171 PRINTS PR00601 Bacterioferritin signature 127 148 2.9E-10 T 11-11-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 SHALO_RS06095 217803d73fd964c778bbd47fd0660333 171 PRINTS PR00601 Bacterioferritin signature 2 21 2.9E-10 T 11-11-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 SHALO_RS06095 217803d73fd964c778bbd47fd0660333 171 Pfam PF00210 Ferritin-like domain 7 140 9.0E-26 T 11-11-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 SHALO_RS06095 217803d73fd964c778bbd47fd0660333 171 Gene3D G3DSA:1.20.1260.10 1 155 2.8E-38 T 11-11-2016 IPR012347 Ferritin-related SHALO_RS06095 217803d73fd964c778bbd47fd0660333 171 PIRSF PIRSF002560 1 156 5.7E-28 T 11-11-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 SHALO_RS10860 d8a3f98ec306c6e98901acbfe03e23c7 249 SUPERFAMILY SSF53850 19 246 3.35E-52 T 11-11-2016 SHALO_RS10860 d8a3f98ec306c6e98901acbfe03e23c7 249 Gene3D G3DSA:3.40.190.10 179 236 1.5E-6 T 11-11-2016 SHALO_RS10860 d8a3f98ec306c6e98901acbfe03e23c7 249 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 25 244 2.9E-55 T 11-11-2016 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 SHALO_RS10860 d8a3f98ec306c6e98901acbfe03e23c7 249 PIRSF PIRSF004846 1 249 1.3E-47 T 11-11-2016 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 SHALO_RS10860 d8a3f98ec306c6e98901acbfe03e23c7 249 Gene3D G3DSA:3.40.190.10 19 126 9.9E-32 T 11-11-2016 SHALO_RS10860 d8a3f98ec306c6e98901acbfe03e23c7 249 Gene3D G3DSA:3.40.190.10 127 178 9.5E-15 T 11-11-2016 SHALO_RS10860 d8a3f98ec306c6e98901acbfe03e23c7 249 Pfam PF13531 Bacterial extracellular solute-binding protein 20 245 1.9E-41 T 11-11-2016 SHALO_RS07675 acd85e18156f0b9873fc31a107900b90 254 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 3 208 1.8E-47 T 11-11-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 SHALO_RS07675 acd85e18156f0b9873fc31a107900b90 254 Gene3D G3DSA:3.40.1010.10 2 111 1.1E-32 T 11-11-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 SHALO_RS07675 acd85e18156f0b9873fc31a107900b90 254 SUPERFAMILY SSF53790 1 248 1.44E-67 T 11-11-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 SHALO_RS07675 acd85e18156f0b9873fc31a107900b90 254 Gene3D G3DSA:3.30.950.10 112 230 3.1E-39 T 11-11-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 SHALO_RS07675 acd85e18156f0b9873fc31a107900b90 254 TIGRFAM TIGR01465 cobM_cbiF: precorrin-4 C11-methyltransferase 4 248 3.1E-105 T 11-11-2016 IPR006362 Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase GO:0009236|GO:0046026 SHALO_RS07675 acd85e18156f0b9873fc31a107900b90 254 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 7 21 - T 11-11-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 SHALO_RS11345 8f24c96a50120e07a3a039a8d58f631f 227 Gene3D G3DSA:3.30.1360.40 4 80 6.3E-18 T 11-11-2016 IPR024946 Arginine repressor C-terminal-like domain SHALO_RS11345 8f24c96a50120e07a3a039a8d58f631f 227 Pfam PF02682 Allophanate hydrolase subunit 1 5 201 1.6E-66 T 11-11-2016 IPR003833 Carboxyltransferase domain, subdomain C and D SHALO_RS11345 8f24c96a50120e07a3a039a8d58f631f 227 SUPERFAMILY SSF160467 4 95 9.15E-17 T 11-11-2016 SHALO_RS11345 8f24c96a50120e07a3a039a8d58f631f 227 Gene3D G3DSA:2.40.100.10 90 225 4.5E-47 T 11-11-2016 IPR029000 Cyclophilin-like domain SHALO_RS11345 8f24c96a50120e07a3a039a8d58f631f 227 TIGRFAM TIGR00370 TIGR00370: sensor histidine kinase inhibitor, KipI family 9 212 1.1E-51 T 11-11-2016 IPR010016 KipI family SHALO_RS11345 8f24c96a50120e07a3a039a8d58f631f 227 SMART SM00796 3 204 2.3E-76 T 11-11-2016 IPR003833 Carboxyltransferase domain, subdomain C and D SHALO_RS11345 8f24c96a50120e07a3a039a8d58f631f 227 SUPERFAMILY SSF50891 90 220 2.58E-43 T 11-11-2016 IPR029000 Cyclophilin-like domain SHALO_RS13320 4c739af1a5e83689773fbe69c1ad777b 749 SUPERFAMILY SSF50692 611 749 2.26E-34 T 11-11-2016 IPR009010 Aspartate decarboxylase-like domain SHALO_RS13320 4c739af1a5e83689773fbe69c1ad777b 749 SUPERFAMILY SSF50692 549 579 2.26E-34 T 11-11-2016 IPR009010 Aspartate decarboxylase-like domain SHALO_RS13320 4c739af1a5e83689773fbe69c1ad777b 749 Gene3D G3DSA:2.40.40.20 565 576 6.9E-47 T 11-11-2016 SHALO_RS13320 4c739af1a5e83689773fbe69c1ad777b 749 Gene3D G3DSA:2.40.40.20 610 749 6.9E-47 T 11-11-2016 SHALO_RS13320 4c739af1a5e83689773fbe69c1ad777b 749 Gene3D G3DSA:2.40.40.20 442 472 6.9E-47 T 11-11-2016 SHALO_RS13320 4c739af1a5e83689773fbe69c1ad777b 749 Gene3D G3DSA:3.40.228.10 1 201 5.2E-69 T 11-11-2016 SHALO_RS13320 4c739af1a5e83689773fbe69c1ad777b 749 Pfam PF00384 Molybdopterin oxidoreductase 2 358 9.8E-44 T 11-11-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS13320 4c739af1a5e83689773fbe69c1ad777b 749 Pfam PF01568 Molydopterin dinucleotide binding domain 617 741 3.9E-19 T 11-11-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 SHALO_RS13320 4c739af1a5e83689773fbe69c1ad777b 749 SUPERFAMILY SSF53706 1 426 3.66E-132 T 11-11-2016 SHALO_RS13320 4c739af1a5e83689773fbe69c1ad777b 749 Gene3D G3DSA:3.40.50.740 233 369 6.6E-40 T 11-11-2016 SHALO_RS06590 17cd61defd26268d9272bb92548f829d 351 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 260 347 1.1E-11 T 11-11-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal SHALO_RS06590 17cd61defd26268d9272bb92548f829d 351 Gene3D G3DSA:3.30.1220.10 252 349 3.8E-23 T 11-11-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal SHALO_RS06590 17cd61defd26268d9272bb92548f829d 351 SUPERFAMILY SSF52540 19 208 7.13E-40 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS06590 17cd61defd26268d9272bb92548f829d 351 SUPERFAMILY SSF90002 260 346 2.62E-15 T 11-11-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal SHALO_RS06590 17cd61defd26268d9272bb92548f829d 351 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 21 202 1.2E-51 T 11-11-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain SHALO_RS06590 17cd61defd26268d9272bb92548f829d 351 Gene3D G3DSA:3.40.50.300 19 221 1.6E-71 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS08680 b21a8ffd457aaca0d5236f0a564eb0fd 648 Gene3D G3DSA:3.40.50.10190 574 648 1.5E-24 T 11-11-2016 IPR001357 BRCT domain SHALO_RS08680 b21a8ffd457aaca0d5236f0a564eb0fd 648 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 6 307 3.1E-106 T 11-11-2016 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 SHALO_RS08680 b21a8ffd457aaca0d5236f0a564eb0fd 648 Pfam PF14520 Helix-hairpin-helix domain 433 487 3.5E-5 T 11-11-2016 SHALO_RS08680 b21a8ffd457aaca0d5236f0a564eb0fd 648 SMART SM00292 574 648 5.4E-10 T 11-11-2016 IPR001357 BRCT domain SHALO_RS08680 b21a8ffd457aaca0d5236f0a564eb0fd 648 SMART SM00278 433 452 240.0 T 11-11-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 SHALO_RS08680 b21a8ffd457aaca0d5236f0a564eb0fd 648 SMART SM00278 467 486 2.4 T 11-11-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 SHALO_RS08680 b21a8ffd457aaca0d5236f0a564eb0fd 648 SMART SM00278 499 518 220.0 T 11-11-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 SHALO_RS08680 b21a8ffd457aaca0d5236f0a564eb0fd 648 SMART SM00278 529 548 2.5 T 11-11-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 SHALO_RS08680 b21a8ffd457aaca0d5236f0a564eb0fd 648 SUPERFAMILY SSF52113 574 647 8.29E-19 T 11-11-2016 IPR001357 BRCT domain SHALO_RS08680 b21a8ffd457aaca0d5236f0a564eb0fd 648 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 574 643 1.8E-12 T 11-11-2016 IPR001357 BRCT domain SHALO_RS08680 b21a8ffd457aaca0d5236f0a564eb0fd 648 SUPERFAMILY SSF50249 309 389 4.63E-26 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold SHALO_RS08680 b21a8ffd457aaca0d5236f0a564eb0fd 648 Pfam PF12826 Helix-hairpin-helix motif 498 554 1.5E-10 T 11-11-2016 SHALO_RS08680 b21a8ffd457aaca0d5236f0a564eb0fd 648 SMART SM00532 1 435 4.0E-220 T 11-11-2016 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 SHALO_RS08680 b21a8ffd457aaca0d5236f0a564eb0fd 648 SUPERFAMILY SSF56091 4 307 3.2E-104 T 11-11-2016 SHALO_RS08680 b21a8ffd457aaca0d5236f0a564eb0fd 648 Gene3D G3DSA:2.40.50.140 309 380 6.4E-31 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold SHALO_RS08680 b21a8ffd457aaca0d5236f0a564eb0fd 648 Hamap MF_01588 DNA ligase [ligA]. 1 647 48.36 T 11-11-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 SHALO_RS08680 b21a8ffd457aaca0d5236f0a564eb0fd 648 SUPERFAMILY SSF47781 394 553 1.02E-48 T 11-11-2016 IPR010994 RuvA domain 2-like SHALO_RS08680 b21a8ffd457aaca0d5236f0a564eb0fd 648 Gene3D G3DSA:1.10.287.610 11 65 1.0E-15 T 11-11-2016 SHALO_RS08680 b21a8ffd457aaca0d5236f0a564eb0fd 648 Gene3D G3DSA:1.10.150.20 423 490 4.2E-26 T 11-11-2016 SHALO_RS08680 b21a8ffd457aaca0d5236f0a564eb0fd 648 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 110 139 - T 11-11-2016 IPR018239 NAD-dependent DNA ligase, active site SHALO_RS08680 b21a8ffd457aaca0d5236f0a564eb0fd 648 Gene3D G3DSA:1.10.150.20 492 553 1.2E-13 T 11-11-2016 SHALO_RS08680 b21a8ffd457aaca0d5236f0a564eb0fd 648 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 312 388 9.9E-33 T 11-11-2016 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 SHALO_RS08680 b21a8ffd457aaca0d5236f0a564eb0fd 648 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 397 421 1.9E-5 T 11-11-2016 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 SHALO_RS08680 b21a8ffd457aaca0d5236f0a564eb0fd 648 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 14 643 3.0E-228 T 11-11-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 SHALO_RS08680 b21a8ffd457aaca0d5236f0a564eb0fd 648 Gene3D G3DSA:3.30.470.30 115 241 5.0E-45 T 11-11-2016 SHALO_RS08680 b21a8ffd457aaca0d5236f0a564eb0fd 648 PIRSF PIRSF001604 1 648 8.3E-225 T 11-11-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 SHALO_RS11195 d60016a61e87a3e5fa851f6bb7a934cf 388 Gene3D G3DSA:3.40.50.720 1 197 5.0E-68 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS11195 d60016a61e87a3e5fa851f6bb7a934cf 388 SUPERFAMILY SSF51735 1 194 1.19E-48 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS11195 d60016a61e87a3e5fa851f6bb7a934cf 388 PIRSF PIRSF000124 1 388 5.7E-141 T 11-11-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 SHALO_RS11195 d60016a61e87a3e5fa851f6bb7a934cf 388 Gene3D G3DSA:1.10.1040.10 198 284 1.9E-34 T 11-11-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 SHALO_RS11195 d60016a61e87a3e5fa851f6bb7a934cf 388 Gene3D G3DSA:3.40.50.720 285 388 4.5E-50 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS11195 d60016a61e87a3e5fa851f6bb7a934cf 388 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 192 281 1.4E-26 T 11-11-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 SHALO_RS11195 d60016a61e87a3e5fa851f6bb7a934cf 388 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 301 375 1.3E-8 T 11-11-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 SHALO_RS11195 d60016a61e87a3e5fa851f6bb7a934cf 388 SUPERFAMILY SSF52413 283 388 7.06E-28 T 11-11-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 SHALO_RS11195 d60016a61e87a3e5fa851f6bb7a934cf 388 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 169 1.6E-33 T 11-11-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 SHALO_RS11195 d60016a61e87a3e5fa851f6bb7a934cf 388 SMART SM00984 300 387 6.4E-12 T 11-11-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 SHALO_RS11195 d60016a61e87a3e5fa851f6bb7a934cf 388 SUPERFAMILY SSF48179 191 287 2.21E-30 T 11-11-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SHALO_RS11195 d60016a61e87a3e5fa851f6bb7a934cf 388 PIRSF PIRSF500134 1 344 1.9E-120 T 11-11-2016 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00500+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346 SHALO_RS11195 d60016a61e87a3e5fa851f6bb7a934cf 388 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 378 3.1E-102 T 11-11-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 SHALO_RS10720 b5f43218059a7bd5308d657373f88600 579 Pfam PF00374 Nickel-dependent hydrogenase 224 292 8.1E-14 T 11-11-2016 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 SHALO_RS10720 b5f43218059a7bd5308d657373f88600 579 SUPERFAMILY SSF143243 8 200 2.62E-40 T 11-11-2016 SHALO_RS10720 b5f43218059a7bd5308d657373f88600 579 SUPERFAMILY SSF56762 198 544 4.32E-104 T 11-11-2016 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS10720 b5f43218059a7bd5308d657373f88600 579 Gene3D G3DSA:1.10.645.10 175 543 1.5E-76 T 11-11-2016 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS10720 b5f43218059a7bd5308d657373f88600 579 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 472 544 1.2E-9 T 11-11-2016 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS10720 b5f43218059a7bd5308d657373f88600 579 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 302 470 1.6E-40 T 11-11-2016 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS10720 b5f43218059a7bd5308d657373f88600 579 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 31 157 4.9E-21 T 11-11-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS10720 b5f43218059a7bd5308d657373f88600 579 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 93 144 2.0E-18 T 11-11-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS04660 b9fec4ffb401b48ff17873038e54bd4d 996 Pfam PF13847 Methyltransferase domain 497 626 1.2E-26 T 11-11-2016 IPR025714 Methyltransferase domain SHALO_RS04660 b9fec4ffb401b48ff17873038e54bd4d 996 SUPERFAMILY SSF102114 72 337 1.31E-44 T 11-11-2016 SHALO_RS04660 b9fec4ffb401b48ff17873038e54bd4d 996 Gene3D G3DSA:3.40.50.150 494 661 4.2E-36 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS04660 b9fec4ffb401b48ff17873038e54bd4d 996 SUPERFAMILY SSF53335 484 659 3.31E-32 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS04660 b9fec4ffb401b48ff17873038e54bd4d 996 SMART SM00729 70 279 0.0036 T 11-11-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 SHALO_RS04660 b9fec4ffb401b48ff17873038e54bd4d 996 Pfam PF13394 4Fe-4S single cluster domain 77 156 3.9E-7 T 11-11-2016 SHALO_RS04660 b9fec4ffb401b48ff17873038e54bd4d 996 Gene3D G3DSA:3.20.20.70 70 321 7.4E-44 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_RS04660 b9fec4ffb401b48ff17873038e54bd4d 996 Pfam PF04055 Radical SAM superfamily 76 229 6.8E-17 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SHALO_RS09455 aa58ca33faa5f74785ba4047039367be 393 SUPERFAMILY SSF58104 184 384 5.1E-46 T 11-11-2016 SHALO_RS09455 aa58ca33faa5f74785ba4047039367be 393 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 247 380 1.3E-28 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SHALO_RS09455 aa58ca33faa5f74785ba4047039367be 393 SMART SM00283 179 393 3.1E-8 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SHALO_RS09455 aa58ca33faa5f74785ba4047039367be 393 Gene3D G3DSA:1.10.287.950 197 386 4.8E-38 T 11-11-2016 SHALO_RS02040 af4c0941321dc30262b2f045b7511129 169 PIRSF PIRSF026509 1 169 3.3E-42 T 11-11-2016 IPR005134 Uncharacterised protein family UPF0114 SHALO_RS02040 af4c0941321dc30262b2f045b7511129 169 Pfam PF03350 Uncharacterized protein family, UPF0114 10 134 1.0E-32 T 11-11-2016 IPR005134 Uncharacterised protein family UPF0114 SHALO_RS14450 05571eb63d88b8b83877efd15b260812 238 Pfam PF17131 Outer membrane lipoprotein-sorting protein 59 230 3.0E-38 T 11-11-2016 IPR033399 Putative outer membrane lipoprotein-sorting protein SHALO_RS14450 05571eb63d88b8b83877efd15b260812 238 Gene3D G3DSA:2.50.20.10 17 231 5.9E-47 T 11-11-2016 SHALO_RS07825 d292a65d5630c68caf94fe9765fc1fd3 407 Gene3D G3DSA:1.10.150.130 104 199 2.2E-13 T 11-11-2016 IPR023109 Integrase/recombinase, N-terminal SHALO_RS07825 d292a65d5630c68caf94fe9765fc1fd3 407 SUPERFAMILY SSF56349 104 394 2.53E-51 T 11-11-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 SHALO_RS07825 d292a65d5630c68caf94fe9765fc1fd3 407 Pfam PF13356 Domain of unknown function (DUF4102) 8 94 9.9E-14 T 11-11-2016 IPR025166 Domain of unknown function DUF4102 SHALO_RS07825 d292a65d5630c68caf94fe9765fc1fd3 407 Pfam PF00589 Phage integrase family 216 384 5.9E-21 T 11-11-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 SHALO_RS07825 d292a65d5630c68caf94fe9765fc1fd3 407 Gene3D G3DSA:1.10.443.10 216 391 9.8E-21 T 11-11-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 SHALO_RS09445 a25dffe1bf2a1abe2f0c4a1ce017455e 1156 SUPERFAMILY SSF51717 335 598 1.24E-72 T 11-11-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 SHALO_RS09445 a25dffe1bf2a1abe2f0c4a1ce017455e 1156 Pfam PF02310 B12 binding domain 716 805 6.8E-19 T 11-11-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 SHALO_RS09445 a25dffe1bf2a1abe2f0c4a1ce017455e 1156 SMART SM01018 627 709 2.8E-32 T 11-11-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 SHALO_RS09445 a25dffe1bf2a1abe2f0c4a1ce017455e 1156 Pfam PF00809 Pterin binding enzyme 338 571 6.9E-37 T 11-11-2016 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 SHALO_RS09445 a25dffe1bf2a1abe2f0c4a1ce017455e 1156 Pfam PF02607 B12 binding domain 631 701 2.5E-19 T 11-11-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 SHALO_RS09445 a25dffe1bf2a1abe2f0c4a1ce017455e 1156 Gene3D G3DSA:3.10.196.10 919 1156 4.4E-56 T 11-11-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 SHALO_RS09445 a25dffe1bf2a1abe2f0c4a1ce017455e 1156 Gene3D G3DSA:1.10.1240.10 625 705 1.1E-23 T 11-11-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 SHALO_RS09445 a25dffe1bf2a1abe2f0c4a1ce017455e 1156 SUPERFAMILY SSF47644 626 707 9.94E-20 T 11-11-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 SHALO_RS09445 a25dffe1bf2a1abe2f0c4a1ce017455e 1156 Gene3D G3DSA:3.40.50.280 714 841 3.4E-43 T 11-11-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 SHALO_RS09445 a25dffe1bf2a1abe2f0c4a1ce017455e 1156 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 909 1156 6.7E-32 T 11-11-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 SHALO_RS09445 a25dffe1bf2a1abe2f0c4a1ce017455e 1156 SUPERFAMILY SSF56507 873 1156 1.44E-71 T 11-11-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 SHALO_RS09445 a25dffe1bf2a1abe2f0c4a1ce017455e 1156 Gene3D G3DSA:3.20.20.330 3 342 1.4E-95 T 11-11-2016 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 SHALO_RS09445 a25dffe1bf2a1abe2f0c4a1ce017455e 1156 SUPERFAMILY SSF52242 711 839 3.79E-37 T 11-11-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 SHALO_RS09445 a25dffe1bf2a1abe2f0c4a1ce017455e 1156 TIGRFAM TIGR02082 metH: methionine synthase 9 1156 0.0 T 11-11-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 SHALO_RS09445 a25dffe1bf2a1abe2f0c4a1ce017455e 1156 PIRSF PIRSF000381 1 1156 0.0 T 11-11-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 SHALO_RS09445 a25dffe1bf2a1abe2f0c4a1ce017455e 1156 Pfam PF02574 Homocysteine S-methyltransferase 13 303 1.2E-63 T 11-11-2016 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 SHALO_RS09445 a25dffe1bf2a1abe2f0c4a1ce017455e 1156 Gene3D G3DSA:3.20.20.20 343 601 1.2E-81 T 11-11-2016 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 SHALO_RS09445 a25dffe1bf2a1abe2f0c4a1ce017455e 1156 SUPERFAMILY SSF82282 3 377 1.57E-99 T 11-11-2016 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 SHALO_RS03645 22e5971c48f9f3204482e93f83bb80b9 269 SUPERFAMILY SSF109604 2 258 1.57E-48 T 11-11-2016 SHALO_RS03645 22e5971c48f9f3204482e93f83bb80b9 269 Gene3D G3DSA:1.10.3150.10 2 232 2.7E-53 T 11-11-2016 IPR013976 Metal-dependent hydrolase HDOD SHALO_RS03645 22e5971c48f9f3204482e93f83bb80b9 269 Pfam PF08668 HDOD domain 12 207 1.3E-39 T 11-11-2016 IPR013976 Metal-dependent hydrolase HDOD SHALO_RS02755 646e773a10e5e009f894bdc37225a4d1 661 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 41 50 - T 11-11-2016 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_RS02755 646e773a10e5e009f894bdc37225a4d1 661 Pfam PF00890 FAD binding domain 7 415 1.3E-119 T 11-11-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_RS02755 646e773a10e5e009f894bdc37225a4d1 661 SUPERFAMILY SSF51905 378 459 9.51E-58 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHALO_RS02755 646e773a10e5e009f894bdc37225a4d1 661 SUPERFAMILY SSF51905 5 274 9.51E-58 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHALO_RS02755 646e773a10e5e009f894bdc37225a4d1 661 Gene3D G3DSA:4.10.80.40 551 601 1.8E-11 T 11-11-2016 SHALO_RS02755 646e773a10e5e009f894bdc37225a4d1 661 Pfam PF02910 Fumarate reductase flavoprotein C-term 473 601 6.5E-38 T 11-11-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_RS02755 646e773a10e5e009f894bdc37225a4d1 661 SUPERFAMILY SSF56425 251 374 1.94E-35 T 11-11-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_RS02755 646e773a10e5e009f894bdc37225a4d1 661 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 7 601 3.6E-222 T 11-11-2016 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_RS02755 646e773a10e5e009f894bdc37225a4d1 661 Gene3D G3DSA:3.50.50.60 370 436 3.5E-86 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHALO_RS02755 646e773a10e5e009f894bdc37225a4d1 661 Gene3D G3DSA:3.50.50.60 3 257 3.5E-86 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHALO_RS02755 646e773a10e5e009f894bdc37225a4d1 661 SUPERFAMILY SSF46977 463 658 1.96E-58 T 11-11-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_RS02755 646e773a10e5e009f894bdc37225a4d1 661 Gene3D G3DSA:3.90.700.10 258 360 4.7E-34 T 11-11-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_RS02755 646e773a10e5e009f894bdc37225a4d1 661 Gene3D G3DSA:1.20.58.100 445 550 1.0E-34 T 11-11-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_RS14005 9cd467c8d5bd53e6475cf90883a84be9 356 Pfam PF00037 4Fe-4S binding domain 49 71 1.3E-6 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_RS14005 9cd467c8d5bd53e6475cf90883a84be9 356 Gene3D G3DSA:3.30.70.20 7 60 5.9E-10 T 11-11-2016 SHALO_RS14005 9cd467c8d5bd53e6475cf90883a84be9 356 Gene3D G3DSA:3.30.70.20 268 296 1.3E-11 T 11-11-2016 SHALO_RS14005 9cd467c8d5bd53e6475cf90883a84be9 356 SUPERFAMILY SSF54862 252 317 6.8E-15 T 11-11-2016 SHALO_RS14005 9cd467c8d5bd53e6475cf90883a84be9 356 Gene3D G3DSA:1.10.1060.10 226 267 7.3E-4 T 11-11-2016 SHALO_RS14005 9cd467c8d5bd53e6475cf90883a84be9 356 Pfam PF12838 4Fe-4S dicluster domain 260 308 2.1E-8 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_RS14005 9cd467c8d5bd53e6475cf90883a84be9 356 SUPERFAMILY SSF54862 28 88 5.12E-12 T 11-11-2016 SHALO_RS14005 9cd467c8d5bd53e6475cf90883a84be9 356 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 55 66 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_RS14005 9cd467c8d5bd53e6475cf90883a84be9 356 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 261 272 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_RS14005 9cd467c8d5bd53e6475cf90883a84be9 356 Gene3D G3DSA:1.10.1060.10 61 87 2.7E-9 T 11-11-2016 SHALO_RS14005 9cd467c8d5bd53e6475cf90883a84be9 356 Gene3D G3DSA:1.10.1060.10 297 336 3.4E-4 T 11-11-2016 SHALO_RS14005 9cd467c8d5bd53e6475cf90883a84be9 356 Gene3D G3DSA:1.10.1060.10 189 190 2.7E-9 T 11-11-2016 SHALO_RS06250 25276541555311070de420b64f26230c 268 PIRSF PIRSF016184 4 266 5.6E-46 T 11-11-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 SHALO_RS06250 25276541555311070de420b64f26230c 268 Pfam PF02567 Phenazine biosynthesis-like protein 11 260 2.6E-51 T 11-11-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 SHALO_RS06250 25276541555311070de420b64f26230c 268 SUPERFAMILY SSF54506 5 264 4.15E-69 T 11-11-2016 SHALO_RS06250 25276541555311070de420b64f26230c 268 Gene3D G3DSA:3.10.310.10 5 128 1.4E-39 T 11-11-2016 SHALO_RS06250 25276541555311070de420b64f26230c 268 Gene3D G3DSA:3.10.310.10 129 254 1.8E-38 T 11-11-2016 SHALO_RS06250 25276541555311070de420b64f26230c 268 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 6 224 9.5E-34 T 11-11-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 SHALO_RS07465 d8c4d8147f02e79d03a31497f61ef489 152 Pfam PF13613 Helix-turn-helix of DDE superfamily endonuclease 49 99 1.9E-13 T 11-11-2016 IPR027805 Transposase, Helix-turn-helix domain SHALO_RS01330 d8c4d8147f02e79d03a31497f61ef489 152 Pfam PF13613 Helix-turn-helix of DDE superfamily endonuclease 49 99 1.9E-13 T 11-11-2016 IPR027805 Transposase, Helix-turn-helix domain SHALO_RS04485 6dd4e885ea022edad1ecb1d141c9a95e 306 Gene3D G3DSA:3.30.450.20 91 173 6.4E-19 T 11-11-2016 SHALO_RS04485 6dd4e885ea022edad1ecb1d141c9a95e 306 SUPERFAMILY SSF103190 95 182 4.91E-9 T 11-11-2016 IPR029151 Periplasmic sensor domain-like SHALO_RS04485 6dd4e885ea022edad1ecb1d141c9a95e 306 Pfam PF02743 Cache domain 88 262 1.6E-30 T 11-11-2016 IPR033479 Double Cache domain 1 SHALO_RS04485 6dd4e885ea022edad1ecb1d141c9a95e 306 Gene3D G3DSA:3.30.450.20 181 242 6.4E-4 T 11-11-2016 SHALO_RS01525 34c69129fd9d2ce8fc23d8386a60ae78 219 SUPERFAMILY SSF52172 1 168 1.57E-34 T 11-11-2016 IPR011006 CheY-like superfamily SHALO_RS01525 34c69129fd9d2ce8fc23d8386a60ae78 219 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 217 2.4E-13 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS01525 34c69129fd9d2ce8fc23d8386a60ae78 219 SMART SM00862 147 217 6.3E-11 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS01525 34c69129fd9d2ce8fc23d8386a60ae78 219 SMART SM00448 1 112 8.7E-34 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS01525 34c69129fd9d2ce8fc23d8386a60ae78 219 Gene3D G3DSA:3.40.50.2300 1 121 9.1E-33 T 11-11-2016 SHALO_RS01525 34c69129fd9d2ce8fc23d8386a60ae78 219 Pfam PF00072 Response regulator receiver domain 3 112 2.0E-24 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS01525 34c69129fd9d2ce8fc23d8386a60ae78 219 SUPERFAMILY SSF46894 146 217 8.84E-12 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SHALO_RS01525 34c69129fd9d2ce8fc23d8386a60ae78 219 Gene3D G3DSA:1.10.10.10 134 218 1.5E-15 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS08440 8c25bec04a18e73001a6ac9c6c4ef643 142 Pfam PF04186 FxsA cytoplasmic membrane protein 4 103 4.0E-16 T 11-11-2016 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 SHALO_RS02310 318375ca62a4543b1b13e5383e8943e6 286 Pfam PF00892 EamA-like transporter family 15 137 1.5E-7 T 11-11-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SHALO_RS02310 318375ca62a4543b1b13e5383e8943e6 286 Pfam PF00892 EamA-like transporter family 148 273 1.1E-6 T 11-11-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SHALO_RS02310 318375ca62a4543b1b13e5383e8943e6 286 SUPERFAMILY SSF103481 187 274 1.09E-9 T 11-11-2016 SHALO_RS02310 318375ca62a4543b1b13e5383e8943e6 286 SUPERFAMILY SSF103481 57 140 9.02E-11 T 11-11-2016 SHALO_RS09990 c5731f56900da33a44cf7214203caaf8 62 Pfam PF00830 Ribosomal L28 family 3 60 7.0E-25 T 11-11-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS09990 c5731f56900da33a44cf7214203caaf8 62 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 61 20.824 T 11-11-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_RS09990 c5731f56900da33a44cf7214203caaf8 62 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 57 3.0E-27 T 11-11-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_RS09990 c5731f56900da33a44cf7214203caaf8 62 SUPERFAMILY SSF143800 1 62 2.16E-26 T 11-11-2016 SHALO_RS09990 c5731f56900da33a44cf7214203caaf8 62 Gene3D G3DSA:2.30.170.40 2 62 3.7E-26 T 11-11-2016 SHALO_RS10815 47a53ea5919bdc8f33b9ca52fd92a3a3 156 PIRSF PIRSF006162 1 151 2.3E-41 T 11-11-2016 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668 SHALO_RS10815 47a53ea5919bdc8f33b9ca52fd92a3a3 156 SUPERFAMILY SSF101307 4 141 3.92E-34 T 11-11-2016 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 SHALO_RS10815 47a53ea5919bdc8f33b9ca52fd92a3a3 156 Pfam PF04608 Phosphatidylglycerophosphatase A 4 141 1.2E-43 T 11-11-2016 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 SHALO_RS10815 47a53ea5919bdc8f33b9ca52fd92a3a3 156 Gene3D G3DSA:1.10.3760.10 55 140 2.2E-7 T 11-11-2016 IPR027416 YutG-like domain SHALO_RS11665 07bbfa490c4f5025097e9ef9d0547c33 1187 SUPERFAMILY SSF52518 5 258 5.0E-75 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold SHALO_RS11665 07bbfa490c4f5025097e9ef9d0547c33 1187 Gene3D G3DSA:3.40.50.970 4 258 1.0E-108 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold SHALO_RS11665 07bbfa490c4f5025097e9ef9d0547c33 1187 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 943 1074 1.4E-8 T 11-11-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 SHALO_RS11665 07bbfa490c4f5025097e9ef9d0547c33 1187 Gene3D G3DSA:3.40.50.920 259 413 1.3E-58 T 11-11-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 SHALO_RS11665 07bbfa490c4f5025097e9ef9d0547c33 1187 SMART SM00890 625 683 1.1E-20 T 11-11-2016 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 SHALO_RS11665 07bbfa490c4f5025097e9ef9d0547c33 1187 SUPERFAMILY SSF54862 675 765 5.02E-18 T 11-11-2016 SHALO_RS11665 07bbfa490c4f5025097e9ef9d0547c33 1187 Gene3D G3DSA:3.40.50.970 797 1176 2.3E-134 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold SHALO_RS11665 07bbfa490c4f5025097e9ef9d0547c33 1187 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 693 704 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_RS11665 07bbfa490c4f5025097e9ef9d0547c33 1187 SUPERFAMILY SSF53323 416 670 1.09E-74 T 11-11-2016 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 SHALO_RS11665 07bbfa490c4f5025097e9ef9d0547c33 1187 Pfam PF13484 4Fe-4S double cluster binding domain 692 763 2.0E-9 T 11-11-2016 SHALO_RS11665 07bbfa490c4f5025097e9ef9d0547c33 1187 TIGRFAM TIGR02176 pyruv_ox_red: pyruvate:ferredoxin (flavodoxin) oxidoreductase 5 1176 0.0 T 11-11-2016 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 SHALO_RS11665 07bbfa490c4f5025097e9ef9d0547c33 1187 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 18 247 5.2E-76 T 11-11-2016 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 SHALO_RS11665 07bbfa490c4f5025097e9ef9d0547c33 1187 PIRSF PIRSF000159 1 1186 0.0 T 11-11-2016 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 SHALO_RS11665 07bbfa490c4f5025097e9ef9d0547c33 1187 SUPERFAMILY SSF52518 795 1183 1.06E-121 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold SHALO_RS11665 07bbfa490c4f5025097e9ef9d0547c33 1187 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 751 762 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_RS11665 07bbfa490c4f5025097e9ef9d0547c33 1187 Gene3D G3DSA:4.10.780.10 639 672 1.8E-11 T 11-11-2016 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 SHALO_RS11665 07bbfa490c4f5025097e9ef9d0547c33 1187 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 269 368 5.6E-14 T 11-11-2016 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II SHALO_RS11665 07bbfa490c4f5025097e9ef9d0547c33 1187 Pfam PF10371 Domain of unknown function 638 681 5.8E-18 T 11-11-2016 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 SHALO_RS11665 07bbfa490c4f5025097e9ef9d0547c33 1187 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 425 608 2.7E-27 T 11-11-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 SHALO_RS11665 07bbfa490c4f5025097e9ef9d0547c33 1187 Gene3D G3DSA:3.30.70.20 676 775 1.2E-18 T 11-11-2016 SHALO_RS11665 07bbfa490c4f5025097e9ef9d0547c33 1187 SUPERFAMILY SSF52922 259 410 1.16E-44 T 11-11-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 SHALO_RS11665 07bbfa490c4f5025097e9ef9d0547c33 1187 Gene3D G3DSA:3.40.920.10 416 624 3.1E-81 T 11-11-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 SHALO_RS12040 af6c4d17753554842862e759cd654e5f 620 Gene3D G3DSA:3.30.450.20 138 264 5.0E-25 T 11-11-2016 SHALO_RS12040 af6c4d17753554842862e759cd654e5f 620 Pfam PF00672 HAMP domain 269 339 2.1E-11 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SHALO_RS12040 af6c4d17753554842862e759cd654e5f 620 Gene3D G3DSA:1.10.287.950 378 590 3.2E-41 T 11-11-2016 SHALO_RS12040 af6c4d17753554842862e759cd654e5f 620 SUPERFAMILY SSF58104 311 619 7.19E-57 T 11-11-2016 SHALO_RS12040 af6c4d17753554842862e759cd654e5f 620 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 425 618 9.7E-39 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SHALO_RS12040 af6c4d17753554842862e759cd654e5f 620 Pfam PF02743 Cache domain 37 248 9.1E-33 T 11-11-2016 IPR033479 Double Cache domain 1 SHALO_RS12040 af6c4d17753554842862e759cd654e5f 620 SUPERFAMILY SSF103190 71 183 3.14E-15 T 11-11-2016 IPR029151 Periplasmic sensor domain-like SHALO_RS12040 af6c4d17753554842862e759cd654e5f 620 SMART SM00283 344 619 1.2E-38 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SHALO_RS12040 af6c4d17753554842862e759cd654e5f 620 SMART SM00304 289 343 1.1E-9 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SHALO_RS03390 30573c97803be95a63b1d9565980db8a 254 Pfam PF00696 Amino acid kinase family 3 227 1.7E-40 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase SHALO_RS03390 30573c97803be95a63b1d9565980db8a 254 Gene3D G3DSA:3.40.1160.10 1 252 3.3E-44 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase SHALO_RS03390 30573c97803be95a63b1d9565980db8a 254 TIGRFAM TIGR01027 proB: glutamate 5-kinase 2 250 5.4E-71 T 11-11-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 SHALO_RS03390 30573c97803be95a63b1d9565980db8a 254 PRINTS PR00474 Glutamate 5-kinase family signature 37 51 5.3E-43 T 11-11-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 Reactome: R-HSA-70614 SHALO_RS03390 30573c97803be95a63b1d9565980db8a 254 PRINTS PR00474 Glutamate 5-kinase family signature 109 130 5.3E-43 T 11-11-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 Reactome: R-HSA-70614 SHALO_RS03390 30573c97803be95a63b1d9565980db8a 254 PRINTS PR00474 Glutamate 5-kinase family signature 202 222 5.3E-43 T 11-11-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 Reactome: R-HSA-70614 SHALO_RS03390 30573c97803be95a63b1d9565980db8a 254 PRINTS PR00474 Glutamate 5-kinase family signature 69 97 5.3E-43 T 11-11-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 Reactome: R-HSA-70614 SHALO_RS03390 30573c97803be95a63b1d9565980db8a 254 PRINTS PR00474 Glutamate 5-kinase family signature 141 168 5.3E-43 T 11-11-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 Reactome: R-HSA-70614 SHALO_RS03390 30573c97803be95a63b1d9565980db8a 254 SUPERFAMILY SSF53633 2 251 3.27E-57 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase SHALO_RS03390 30573c97803be95a63b1d9565980db8a 254 Hamap MF_00456 Glutamate 5-kinase [proB]. 2 253 30.73 T 11-11-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 SHALO_RS03390 30573c97803be95a63b1d9565980db8a 254 PIRSF PIRSF000729 1 254 6.2E-75 T 11-11-2016 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 SHALO_RS05225 78d34bac8bac528bb2ec69e49b87a520 629 Pfam PF07696 7TMR-DISM extracellular 2 38 162 8.3E-15 T 11-11-2016 IPR011622 7TM-DISM receptor, extracellular domain, type 2 SHALO_RS05225 78d34bac8bac528bb2ec69e49b87a520 629 SUPERFAMILY SSF55874 477 626 1.57E-25 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS05225 78d34bac8bac528bb2ec69e49b87a520 629 Gene3D G3DSA:3.30.565.10 478 626 1.2E-25 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS05225 78d34bac8bac528bb2ec69e49b87a520 629 SMART SM00387 518 628 1.2E-12 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS05225 78d34bac8bac528bb2ec69e49b87a520 629 Pfam PF07695 7TM diverse intracellular signalling 180 373 6.4E-24 T 11-11-2016 IPR011623 7TM-DISM receptor, extracellular domain, type 1 SHALO_RS05225 78d34bac8bac528bb2ec69e49b87a520 629 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 520 626 1.4E-13 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS06140 8506d2067474636afcf60722865b36da 408 Pfam PF04963 Sigma-54 factor, core binding domain 66 241 2.3E-29 T 11-11-2016 IPR007046 RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0006352 SHALO_RS06140 8506d2067474636afcf60722865b36da 408 Pfam PF04552 Sigma-54, DNA binding domain 249 402 2.8E-44 T 11-11-2016 IPR007634 RNA polymerase sigma factor 54, DNA-binding SHALO_RS06140 8506d2067474636afcf60722865b36da 408 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 9 401 1.0E-90 T 11-11-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 SHALO_RS06140 8506d2067474636afcf60722865b36da 408 PRINTS PR00045 Sigma-54 factor signature 377 395 2.2E-15 T 11-11-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 SHALO_RS06140 8506d2067474636afcf60722865b36da 408 PRINTS PR00045 Sigma-54 factor signature 305 317 2.2E-15 T 11-11-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 SHALO_RS06140 8506d2067474636afcf60722865b36da 408 PRINTS PR00045 Sigma-54 factor signature 321 332 2.2E-15 T 11-11-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 SHALO_RS06140 8506d2067474636afcf60722865b36da 408 PRINTS PR00045 Sigma-54 factor signature 137 154 2.2E-15 T 11-11-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 SHALO_RS06140 8506d2067474636afcf60722865b36da 408 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 382 389 - T 11-11-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 SHALO_RS06140 8506d2067474636afcf60722865b36da 408 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 4 48 4.0E-10 T 11-11-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 SHALO_RS06140 8506d2067474636afcf60722865b36da 408 PIRSF PIRSF000774 52 404 3.0E-63 T 11-11-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 SHALO_RS09690 23a93003adbc9fb2af9d8ca1b4458976 436 SMART SM00487 20 223 7.9E-48 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SHALO_RS09690 23a93003adbc9fb2af9d8ca1b4458976 436 SUPERFAMILY SSF52540 77 360 3.44E-67 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS09690 23a93003adbc9fb2af9d8ca1b4458976 436 Gene3D G3DSA:3.40.50.300 221 367 1.9E-49 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS09690 23a93003adbc9fb2af9d8ca1b4458976 436 Pfam PF00270 DEAD/DEAH box helicase 25 196 1.2E-47 T 11-11-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SHALO_RS09690 23a93003adbc9fb2af9d8ca1b4458976 436 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 11-11-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site SHALO_RS09690 23a93003adbc9fb2af9d8ca1b4458976 436 Gene3D G3DSA:3.40.50.300 3 220 1.7E-73 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS09690 23a93003adbc9fb2af9d8ca1b4458976 436 SMART SM00490 259 340 7.9E-31 T 11-11-2016 IPR001650 Helicase, C-terminal SHALO_RS09690 23a93003adbc9fb2af9d8ca1b4458976 436 Pfam PF00271 Helicase conserved C-terminal domain 240 340 2.2E-26 T 11-11-2016 IPR001650 Helicase, C-terminal SHALO_RS09660 8110593def24da8a2966642d4e1fa0a0 490 Pfam PF00990 Diguanylate cyclase, GGDEF domain 333 485 2.4E-47 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS09660 8110593def24da8a2966642d4e1fa0a0 490 SUPERFAMILY SSF55073 337 487 5.1E-47 T 11-11-2016 IPR029787 Nucleotide cyclase SHALO_RS09660 8110593def24da8a2966642d4e1fa0a0 490 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 328 488 6.0E-51 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS09660 8110593def24da8a2966642d4e1fa0a0 490 Gene3D G3DSA:3.30.70.270 334 487 1.9E-51 T 11-11-2016 SHALO_RS09660 8110593def24da8a2966642d4e1fa0a0 490 Pfam PF14827 Double sensory domain of two-component sensor kinase 46 201 1.3E-6 T 11-11-2016 IPR029150 Double Cache domain 3 SHALO_RS09660 8110593def24da8a2966642d4e1fa0a0 490 SUPERFAMILY SSF103190 53 169 1.4E-6 T 11-11-2016 IPR029151 Periplasmic sensor domain-like SHALO_RS09660 8110593def24da8a2966642d4e1fa0a0 490 SMART SM00267 321 489 3.5E-57 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS09650 535f1712bfee4a98824ec75338a41578 195 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 122 170 1.2E-6 T 11-11-2016 IPR019264 Domain of unknown function DUF2179 SHALO_RS09650 535f1712bfee4a98824ec75338a41578 195 Hamap MF_01515 UPF0316 protein . 13 181 26.955 T 11-11-2016 IPR022930 Protein of unknown function UPF0316 SHALO_RS12480 f247f9bda57a49dfd3fc1c109c7ce7dd 259 PRINTS PR01077 Claudin family signature 96 117 4.4E-6 T 11-11-2016 SHALO_RS12480 f247f9bda57a49dfd3fc1c109c7ce7dd 259 PRINTS PR01077 Claudin family signature 63 85 4.4E-6 T 11-11-2016 SHALO_RS12480 f247f9bda57a49dfd3fc1c109c7ce7dd 259 PRINTS PR01077 Claudin family signature 150 174 4.4E-6 T 11-11-2016 SHALO_RS12480 f247f9bda57a49dfd3fc1c109c7ce7dd 259 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 17 240 6.7E-58 T 11-11-2016 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 SHALO_RS05015 b2cbca0b4481b4ae269c1a35383c796f 198 Pfam PF02589 Uncharacterised ACR, YkgG family COG1556 2 192 3.2E-36 T 11-11-2016 IPR003741 LUD domain SHALO_RS05015 b2cbca0b4481b4ae269c1a35383c796f 198 Gene3D G3DSA:3.40.50.10420 3 147 3.8E-5 T 11-11-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain SHALO_RS00580 24f8e06292d978e9716f665015e40ed9 331 Pfam PF00586 AIR synthase related protein, N-terminal domain 61 160 6.1E-11 T 11-11-2016 IPR016188 PurM-like, N-terminal domain SHALO_RS00580 24f8e06292d978e9716f665015e40ed9 331 SUPERFAMILY SSF55326 4 165 2.09E-46 T 11-11-2016 SHALO_RS00580 24f8e06292d978e9716f665015e40ed9 331 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 4 331 40.861 T 11-11-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 SHALO_RS00580 24f8e06292d978e9716f665015e40ed9 331 Pfam PF02769 AIR synthase related protein, C-terminal domain 173 329 4.8E-28 T 11-11-2016 IPR010918 AIR synthase-related protein, C-terminal domain SHALO_RS00580 24f8e06292d978e9716f665015e40ed9 331 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 4 319 2.5E-121 T 11-11-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 SHALO_RS00580 24f8e06292d978e9716f665015e40ed9 331 SUPERFAMILY SSF56042 171 328 2.49E-47 T 11-11-2016 IPR010918 AIR synthase-related protein, C-terminal domain SHALO_RS00580 24f8e06292d978e9716f665015e40ed9 331 Gene3D G3DSA:3.30.1330.10 19 166 2.8E-52 T 11-11-2016 IPR016188 PurM-like, N-terminal domain SHALO_RS00580 24f8e06292d978e9716f665015e40ed9 331 Gene3D G3DSA:3.90.650.10 172 329 3.2E-54 T 11-11-2016 IPR010918 AIR synthase-related protein, C-terminal domain SHALO_RS04925 04d92171b93ad0fa7bdab84ecd9b9683 463 Gene3D G3DSA:3.40.50.300 210 364 2.8E-45 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS04925 04d92171b93ad0fa7bdab84ecd9b9683 463 SMART SM00490 260 341 6.7E-27 T 11-11-2016 IPR001650 Helicase, C-terminal SHALO_RS04925 04d92171b93ad0fa7bdab84ecd9b9683 463 Pfam PF00270 DEAD/DEAH box helicase 31 197 8.0E-45 T 11-11-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SHALO_RS04925 04d92171b93ad0fa7bdab84ecd9b9683 463 SMART SM00487 26 224 2.6E-56 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SHALO_RS04925 04d92171b93ad0fa7bdab84ecd9b9683 463 Pfam PF03880 DbpA RNA binding domain 390 459 1.8E-22 T 11-11-2016 IPR005580 DbpA, RNA-binding domain SHALO_RS04925 04d92171b93ad0fa7bdab84ecd9b9683 463 Gene3D G3DSA:3.40.50.300 4 209 1.6E-75 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS04925 04d92171b93ad0fa7bdab84ecd9b9683 463 Pfam PF00271 Helicase conserved C-terminal domain 235 340 2.9E-26 T 11-11-2016 IPR001650 Helicase, C-terminal SHALO_RS04925 04d92171b93ad0fa7bdab84ecd9b9683 463 SUPERFAMILY SSF52540 77 358 6.79E-70 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS04925 04d92171b93ad0fa7bdab84ecd9b9683 463 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 155 163 - T 11-11-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site SHALO_RS10370 5d8d70e916a76070a9c5c244f51b0a99 593 SUPERFAMILY SSF56601 193 580 2.82E-68 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like SHALO_RS10370 5d8d70e916a76070a9c5c244f51b0a99 593 Pfam PF00905 Penicillin binding protein transpeptidase domain 269 575 1.5E-59 T 11-11-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 SHALO_RS10370 5d8d70e916a76070a9c5c244f51b0a99 593 Gene3D G3DSA:3.40.710.10 250 580 5.1E-68 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like SHALO_RS10370 5d8d70e916a76070a9c5c244f51b0a99 593 Pfam PF03717 Penicillin-binding Protein dimerisation domain 49 209 2.6E-13 T 11-11-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 SHALO_RS10370 5d8d70e916a76070a9c5c244f51b0a99 593 SUPERFAMILY SSF56519 49 242 3.79E-18 T 11-11-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 SHALO_RS10370 5d8d70e916a76070a9c5c244f51b0a99 593 Gene3D G3DSA:3.90.1310.10 159 249 3.0E-13 T 11-11-2016 SHALO_RS14485 24ca3060cac6c31fe732a31c124d8af3 852 Gene3D G3DSA:3.40.228.10 325 407 2.7E-41 T 11-11-2016 SHALO_RS14485 24ca3060cac6c31fe732a31c124d8af3 852 Gene3D G3DSA:3.40.228.10 183 291 2.7E-41 T 11-11-2016 SHALO_RS14485 24ca3060cac6c31fe732a31c124d8af3 852 Gene3D G3DSA:3.40.50.740 101 182 3.0E-46 T 11-11-2016 SHALO_RS14485 24ca3060cac6c31fe732a31c124d8af3 852 Gene3D G3DSA:3.40.50.740 460 560 3.0E-46 T 11-11-2016 SHALO_RS14485 24ca3060cac6c31fe732a31c124d8af3 852 SUPERFAMILY SSF53706 332 717 7.85E-125 T 11-11-2016 SHALO_RS14485 24ca3060cac6c31fe732a31c124d8af3 852 SUPERFAMILY SSF53706 44 291 7.85E-125 T 11-11-2016 SHALO_RS14485 24ca3060cac6c31fe732a31c124d8af3 852 SUPERFAMILY SSF50692 710 851 6.84E-22 T 11-11-2016 IPR009010 Aspartate decarboxylase-like domain SHALO_RS14485 24ca3060cac6c31fe732a31c124d8af3 852 SMART SM00926 43 96 2.5E-11 T 11-11-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS14485 24ca3060cac6c31fe732a31c124d8af3 852 Pfam PF01568 Molydopterin dinucleotide binding domain 736 840 9.3E-12 T 11-11-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 SHALO_RS14485 24ca3060cac6c31fe732a31c124d8af3 852 Gene3D G3DSA:2.20.25.90 42 100 4.1E-16 T 11-11-2016 SHALO_RS14485 24ca3060cac6c31fe732a31c124d8af3 852 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 44 95 5.6E-9 T 11-11-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS14485 24ca3060cac6c31fe732a31c124d8af3 852 Pfam PF00384 Molybdopterin oxidoreductase 99 558 4.7E-31 T 11-11-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS14485 24ca3060cac6c31fe732a31c124d8af3 852 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 31 0.0012 T 11-11-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal SHALO_RS14485 24ca3060cac6c31fe732a31c124d8af3 852 Gene3D G3DSA:2.40.40.20 699 852 6.2E-24 T 11-11-2016 SHALO_RS10785 c09edac93f83b2d2ad18c2f5c3dac539 405 SUPERFAMILY SSF51161 134 387 8.84E-37 T 11-11-2016 IPR011004 Trimeric LpxA-like SHALO_RS10785 c09edac93f83b2d2ad18c2f5c3dac539 405 Gene3D G3DSA:3.30.60.70 177 217 5.0E-18 T 11-11-2016 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain KEGG: 00300+2.3.1.117 SHALO_RS10785 c09edac93f83b2d2ad18c2f5c3dac539 405 Gene3D G3DSA:2.160.10.10 225 405 2.9E-31 T 11-11-2016 SHALO_RS10785 c09edac93f83b2d2ad18c2f5c3dac539 405 Pfam PF14790 Tetrahydrodipicolinate N-succinyltransferase N-terminal 11 175 4.8E-70 T 11-11-2016 SHALO_RS10785 c09edac93f83b2d2ad18c2f5c3dac539 405 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 300 332 1.9E-12 T 11-11-2016 IPR001451 Hexapeptide repeat SHALO_RS10785 c09edac93f83b2d2ad18c2f5c3dac539 405 Pfam PF14789 Tetrahydrodipicolinate N-succinyltransferase middle 177 217 7.1E-12 T 11-11-2016 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain KEGG: 00300+2.3.1.117 SHALO_RS10785 c09edac93f83b2d2ad18c2f5c3dac539 405 Hamap MF_02122 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 25 405 43.091 T 11-11-2016 IPR026586 Type 2 tetrahydrodipicolinate N-succinyltransferase family GO:0008666 KEGG: 00300+2.3.1.117 SHALO_RS13155 994e0836d3ce93dfde2eb5b2b1969af0 260 SUPERFAMILY SSF54534 25 231 4.52E-51 T 11-11-2016 SHALO_RS13155 994e0836d3ce93dfde2eb5b2b1969af0 260 Gene3D G3DSA:1.10.287.460 13 118 1.1E-32 T 11-11-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 SHALO_RS13155 994e0836d3ce93dfde2eb5b2b1969af0 260 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 19 135 7.9E-31 T 11-11-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 SHALO_RS13155 994e0836d3ce93dfde2eb5b2b1969af0 260 Gene3D G3DSA:3.10.50.40 119 231 6.0E-33 T 11-11-2016 SHALO_RS13155 994e0836d3ce93dfde2eb5b2b1969af0 260 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 142 229 6.2E-18 T 11-11-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 SHALO_RS09110 daefa1315008e074e222be021485ee3a 206 SUPERFAMILY SSF54001 37 164 2.7E-6 T 11-11-2016 SHALO_RS09110 daefa1315008e074e222be021485ee3a 206 Gene3D G3DSA:3.90.1720.10 33 166 9.7E-9 T 11-11-2016 IPR000064 Endopeptidase, NLPC/P60 domain SHALO_RS09110 daefa1315008e074e222be021485ee3a 206 Pfam PF00877 NlpC/P60 family 50 168 4.2E-5 T 11-11-2016 IPR000064 Endopeptidase, NLPC/P60 domain SHALO_RS02585 6ba469eda5989bd394be025b90877d6b 210 Pfam PF13643 Domain of unknown function (DUF4145) 87 166 2.8E-14 T 11-11-2016 IPR025285 Domain of unknown function DUF4145 SHALO_RS00325 c634318d6757a92055d12be3340ccbe5 402 Pfam PF09565 NgoFVII restriction endonuclease 18 131 9.2E-9 T 11-11-2016 IPR019065 Restriction endonuclease, type II, NgoFVII SHALO_RS00325 c634318d6757a92055d12be3340ccbe5 402 SUPERFAMILY SSF56024 62 146 6.98E-8 T 11-11-2016 SHALO_RS00325 c634318d6757a92055d12be3340ccbe5 402 Gene3D G3DSA:3.30.870.10 55 147 3.0E-6 T 11-11-2016 SHALO_RS02850 ec628f1de910c692b67ab52c9555ae0d 528 Gene3D G3DSA:3.30.1360.70 4 93 1.1E-22 T 11-11-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 SHALO_RS02850 ec628f1de910c692b67ab52c9555ae0d 528 SUPERFAMILY SSF52374 101 424 5.12E-80 T 11-11-2016 SHALO_RS02850 ec628f1de910c692b67ab52c9555ae0d 528 Gene3D G3DSA:1.10.730.10 422 528 3.4E-27 T 11-11-2016 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 SHALO_RS02850 ec628f1de910c692b67ab52c9555ae0d 528 SUPERFAMILY SSF47323 408 528 1.24E-22 T 11-11-2016 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 SHALO_RS02850 ec628f1de910c692b67ab52c9555ae0d 528 Gene3D G3DSA:3.40.50.620 100 421 5.0E-93 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHALO_RS02850 ec628f1de910c692b67ab52c9555ae0d 528 Pfam PF05746 DALR anticodon binding domain 414 528 1.1E-24 T 11-11-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 SHALO_RS02850 ec628f1de910c692b67ab52c9555ae0d 528 SMART SM01016 3 77 1.2E-23 T 11-11-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 SHALO_RS02850 ec628f1de910c692b67ab52c9555ae0d 528 Hamap MF_00123 Arginine--tRNA ligase [argS]. 3 528 23.532 T 11-11-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 SHALO_RS02850 ec628f1de910c692b67ab52c9555ae0d 528 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 8 528 3.0E-134 T 11-11-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 SHALO_RS02850 ec628f1de910c692b67ab52c9555ae0d 528 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 114 123 - T 11-11-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 SHALO_RS02850 ec628f1de910c692b67ab52c9555ae0d 528 Pfam PF00750 tRNA synthetases class I (R) 98 386 2.8E-19 T 11-11-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 SHALO_RS02850 ec628f1de910c692b67ab52c9555ae0d 528 SUPERFAMILY SSF55190 4 86 2.09E-19 T 11-11-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 SHALO_RS02850 ec628f1de910c692b67ab52c9555ae0d 528 PRINTS PR01038 Arginyl-tRNA synthetase signature 283 304 1.4E-22 T 11-11-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 SHALO_RS02850 ec628f1de910c692b67ab52c9555ae0d 528 PRINTS PR01038 Arginyl-tRNA synthetase signature 104 119 1.4E-22 T 11-11-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 SHALO_RS02850 ec628f1de910c692b67ab52c9555ae0d 528 PRINTS PR01038 Arginyl-tRNA synthetase signature 143 156 1.4E-22 T 11-11-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 SHALO_RS02850 ec628f1de910c692b67ab52c9555ae0d 528 PRINTS PR01038 Arginyl-tRNA synthetase signature 119 135 1.4E-22 T 11-11-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 SHALO_RS02850 ec628f1de910c692b67ab52c9555ae0d 528 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 3 77 1.2E-17 T 11-11-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 SHALO_RS02850 ec628f1de910c692b67ab52c9555ae0d 528 SMART SM00836 414 528 1.8E-32 T 11-11-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 SHALO_RS10995 77f6a84758bd4396939b52802ea67a14 696 TIGRFAM TIGR04345 ovoA_Cterm: putative 4-mercaptohistidine N1-methyltranferase 459 695 8.0E-83 T 11-11-2016 IPR027625 Putative 4-mercaptohistidine N1-methyltranferase, OvoA C-terminal domain SHALO_RS10995 77f6a84758bd4396939b52802ea67a14 696 Gene3D G3DSA:3.90.1580.10 189 449 5.4E-52 T 11-11-2016 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 SHALO_RS10995 77f6a84758bd4396939b52802ea67a14 696 TIGRFAM TIGR04344 ovoA_Nterm: 5-histidylcysteine sulfoxide synthase 8 446 3.5E-214 T 11-11-2016 IPR027577 5-histidylcysteine sulfoxide synthase SHALO_RS10995 77f6a84758bd4396939b52802ea67a14 696 SUPERFAMILY SSF53335 479 647 3.44E-20 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS10995 77f6a84758bd4396939b52802ea67a14 696 Pfam PF08241 Methyltransferase domain 499 622 4.9E-9 T 11-11-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 SHALO_RS10995 77f6a84758bd4396939b52802ea67a14 696 Pfam PF03781 Sulfatase-modifying factor enzyme 1 215 446 7.4E-26 T 11-11-2016 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 SHALO_RS10995 77f6a84758bd4396939b52802ea67a14 696 Gene3D G3DSA:3.40.50.150 465 534 3.1E-23 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS10995 77f6a84758bd4396939b52802ea67a14 696 Gene3D G3DSA:3.40.50.150 567 650 3.1E-23 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS10995 77f6a84758bd4396939b52802ea67a14 696 SUPERFAMILY SSF56436 191 447 6.59E-55 T 11-11-2016 IPR016187 C-type lectin fold SHALO_RS10995 77f6a84758bd4396939b52802ea67a14 696 Pfam PF12867 DinB superfamily 29 162 2.4E-6 T 11-11-2016 IPR024775 DinB-like domain SHALO_RS04695 8d9614c5d254d4e66936e4699adc51e4 285 SUPERFAMILY SSF103481 38 140 6.02E-16 T 11-11-2016 SHALO_RS04695 8d9614c5d254d4e66936e4699adc51e4 285 SUPERFAMILY SSF103481 193 282 2.22E-11 T 11-11-2016 SHALO_RS04695 8d9614c5d254d4e66936e4699adc51e4 285 Pfam PF00892 EamA-like transporter family 151 281 4.1E-18 T 11-11-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SHALO_RS04695 8d9614c5d254d4e66936e4699adc51e4 285 Pfam PF00892 EamA-like transporter family 8 138 1.2E-22 T 11-11-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SHALO_RS13440 33ff2184d3be96dfd60803146b1c762d 160 Gene3D G3DSA:2.40.128.110 21 158 1.2E-8 T 11-11-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like SHALO_RS13440 33ff2184d3be96dfd60803146b1c762d 160 Pfam PF04264 YceI-like domain 37 158 1.1E-9 T 11-11-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like SHALO_RS13440 33ff2184d3be96dfd60803146b1c762d 160 SUPERFAMILY SSF101874 30 158 3.27E-10 T 11-11-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like SHALO_RS14440 cc105f09e0a4174c92c520c766fd1851 823 SUPERFAMILY SSF50692 664 807 2.19E-35 T 11-11-2016 IPR009010 Aspartate decarboxylase-like domain SHALO_RS14440 cc105f09e0a4174c92c520c766fd1851 823 SUPERFAMILY SSF53706 8 477 9.2E-127 T 11-11-2016 SHALO_RS14440 cc105f09e0a4174c92c520c766fd1851 823 SUPERFAMILY SSF53706 508 678 9.2E-127 T 11-11-2016 SHALO_RS14440 cc105f09e0a4174c92c520c766fd1851 823 TIGRFAM TIGR02693 arsenite_ox_L: arsenite oxidase, large subunit 8 807 4.8E-298 T 11-11-2016 IPR014066 Arsenite oxidase, large subunit MetaCyc: PWY-7429 SHALO_RS14440 cc105f09e0a4174c92c520c766fd1851 823 Gene3D G3DSA:2.40.40.20 688 810 2.4E-34 T 11-11-2016 SHALO_RS14440 cc105f09e0a4174c92c520c766fd1851 823 Gene3D G3DSA:3.40.50.740 120 361 4.8E-59 T 11-11-2016 SHALO_RS14440 cc105f09e0a4174c92c520c766fd1851 823 Gene3D G3DSA:3.40.50.740 363 617 9.9E-43 T 11-11-2016 SHALO_RS14440 cc105f09e0a4174c92c520c766fd1851 823 Pfam PF00384 Molybdopterin oxidoreductase 119 576 1.3E-32 T 11-11-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS14440 cc105f09e0a4174c92c520c766fd1851 823 Pfam PF01568 Molydopterin dinucleotide binding domain 696 800 9.5E-24 T 11-11-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 SHALO_RS01245 274c888b2ee5c661b3d3f54e05682b40 244 SUPERFAMILY SSF56300 12 132 5.7E-18 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like SHALO_RS01245 274c888b2ee5c661b3d3f54e05682b40 244 SUPERFAMILY SSF56300 175 223 5.7E-18 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like SHALO_RS01245 274c888b2ee5c661b3d3f54e05682b40 244 Gene3D G3DSA:3.60.21.10 12 126 8.5E-13 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like SHALO_RS01245 274c888b2ee5c661b3d3f54e05682b40 244 Gene3D G3DSA:3.60.21.10 162 221 8.5E-13 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like SHALO_RS01245 274c888b2ee5c661b3d3f54e05682b40 244 Pfam PF00149 Calcineurin-like phosphoesterase 12 200 6.3E-5 T 11-11-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 SHALO_RS11140 a85c514bcade2da4fcd0b0314b041072 306 Gene3D G3DSA:3.40.50.720 1 229 1.4E-26 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS11140 a85c514bcade2da4fcd0b0314b041072 306 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 212 6.1E-25 T 11-11-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 SHALO_RS11140 a85c514bcade2da4fcd0b0314b041072 306 SUPERFAMILY SSF51735 1 283 3.05E-36 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS00870 343149382f087f586713652f369fae4c 93 Gene3D G3DSA:1.10.760.10 8 91 2.5E-16 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS00870 343149382f087f586713652f369fae4c 93 Pfam PF00034 Cytochrome c 12 91 1.9E-5 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS00870 343149382f087f586713652f369fae4c 93 SUPERFAMILY SSF46626 10 90 3.58E-13 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS02815 b72b23bf32a9e1c3eec56a4d7fe849c0 263 Gene3D G3DSA:3.40.50.10490 156 246 2.9E-66 T 11-11-2016 SHALO_RS02815 b72b23bf32a9e1c3eec56a4d7fe849c0 263 Gene3D G3DSA:3.40.50.10490 21 97 2.9E-66 T 11-11-2016 SHALO_RS02815 b72b23bf32a9e1c3eec56a4d7fe849c0 263 PRINTS PR00395 Ribosomal protein S2 signature 35 44 1.5E-36 T 11-11-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_RS02815 b72b23bf32a9e1c3eec56a4d7fe849c0 263 PRINTS PR00395 Ribosomal protein S2 signature 156 173 1.5E-36 T 11-11-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_RS02815 b72b23bf32a9e1c3eec56a4d7fe849c0 263 PRINTS PR00395 Ribosomal protein S2 signature 4 22 1.5E-36 T 11-11-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_RS02815 b72b23bf32a9e1c3eec56a4d7fe849c0 263 PRINTS PR00395 Ribosomal protein S2 signature 85 102 1.5E-36 T 11-11-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_RS02815 b72b23bf32a9e1c3eec56a4d7fe849c0 263 PRINTS PR00395 Ribosomal protein S2 signature 173 184 1.5E-36 T 11-11-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_RS02815 b72b23bf32a9e1c3eec56a4d7fe849c0 263 PRINTS PR00395 Ribosomal protein S2 signature 194 208 1.5E-36 T 11-11-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_RS02815 b72b23bf32a9e1c3eec56a4d7fe849c0 263 Pfam PF00318 Ribosomal protein S2 7 222 1.4E-94 T 11-11-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_RS02815 b72b23bf32a9e1c3eec56a4d7fe849c0 263 Gene3D G3DSA:1.10.287.610 98 150 1.5E-23 T 11-11-2016 SHALO_RS02815 b72b23bf32a9e1c3eec56a4d7fe849c0 263 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 1 223 1.3E-109 T 11-11-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 SHALO_RS02815 b72b23bf32a9e1c3eec56a4d7fe849c0 263 SUPERFAMILY SSF52313 4 231 4.58E-94 T 11-11-2016 IPR023591 Ribosomal protein S2, flavodoxin-like domain SHALO_RS02815 b72b23bf32a9e1c3eec56a4d7fe849c0 263 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 4 15 - T 11-11-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 SHALO_RS02815 b72b23bf32a9e1c3eec56a4d7fe849c0 263 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 1 223 40.177 T 11-11-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 SHALO_RS13955 78fb9634f8135c4ad097f6b44640723c 465 SUPERFAMILY SSF64153 11 206 1.14E-46 T 11-11-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 SHALO_RS13955 78fb9634f8135c4ad097f6b44640723c 465 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 210 464 14.121 T 11-11-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 SHALO_RS13955 78fb9634f8135c4ad097f6b44640723c 465 Gene3D G3DSA:3.40.50.10260 5 223 1.1E-50 T 11-11-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 SHALO_RS13955 78fb9634f8135c4ad097f6b44640723c 465 PIRSF PIRSF017184 1 463 1.6E-96 T 11-11-2016 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 SHALO_RS13955 78fb9634f8135c4ad097f6b44640723c 465 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 4 197 19.284 T 11-11-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 SHALO_RS13955 78fb9634f8135c4ad097f6b44640723c 465 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 207 462 6.2E-45 T 11-11-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 SHALO_RS13955 78fb9634f8135c4ad097f6b44640723c 465 Pfam PF03853 YjeF-related protein N-terminus 24 176 4.8E-33 T 11-11-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 SHALO_RS13955 78fb9634f8135c4ad097f6b44640723c 465 Gene3D G3DSA:3.40.1190.20 224 459 3.3E-52 T 11-11-2016 IPR029056 Ribokinase-like SHALO_RS13955 78fb9634f8135c4ad097f6b44640723c 465 Pfam PF01256 Carbohydrate kinase 234 458 2.6E-41 T 11-11-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 SHALO_RS13955 78fb9634f8135c4ad097f6b44640723c 465 SUPERFAMILY SSF53613 215 462 1.46E-44 T 11-11-2016 IPR029056 Ribokinase-like SHALO_RS13955 78fb9634f8135c4ad097f6b44640723c 465 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 4 197 6.5E-37 T 11-11-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 SHALO_RS07200 00c26bf661ed2e6d2477b4c551061c7f 463 Hamap MF_00743 Fumarate hydratase class II [fumC]. 3 461 88.198 T 11-11-2016 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 SHALO_RS07200 00c26bf661ed2e6d2477b4c551061c7f 463 Gene3D G3DSA:1.10.275.10 1 137 1.1E-62 T 11-11-2016 IPR024083 Fumarase/histidase, N-terminal SHALO_RS07200 00c26bf661ed2e6d2477b4c551061c7f 463 ProSitePatterns PS00163 Fumarate lyases signature. 316 325 - T 11-11-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 SHALO_RS07200 00c26bf661ed2e6d2477b4c551061c7f 463 TIGRFAM TIGR00979 fumC_II: fumarate hydratase, class II 3 459 8.7E-239 T 11-11-2016 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 SHALO_RS07200 00c26bf661ed2e6d2477b4c551061c7f 463 Gene3D G3DSA:1.20.200.10 138 414 1.6E-100 T 11-11-2016 SHALO_RS07200 00c26bf661ed2e6d2477b4c551061c7f 463 Pfam PF00206 Lyase 11 341 1.1E-114 T 11-11-2016 IPR022761 Fumarate lyase, N-terminal SHALO_RS07200 00c26bf661ed2e6d2477b4c551061c7f 463 Gene3D G3DSA:1.10.40.30 415 462 8.3E-29 T 11-11-2016 SHALO_RS07200 00c26bf661ed2e6d2477b4c551061c7f 463 Pfam PF10415 Fumarase C C-terminus 407 460 1.7E-22 T 11-11-2016 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 SHALO_RS07200 00c26bf661ed2e6d2477b4c551061c7f 463 SUPERFAMILY SSF48557 3 459 2.51E-151 T 11-11-2016 IPR008948 L-Aspartase-like GO:0003824 SHALO_RS07200 00c26bf661ed2e6d2477b4c551061c7f 463 PRINTS PR00149 Fumarate lyase superfamily signature 316 332 1.4E-32 T 11-11-2016 IPR000362 Fumarate lyase family SHALO_RS07200 00c26bf661ed2e6d2477b4c551061c7f 463 PRINTS PR00149 Fumarate lyase superfamily signature 133 151 1.4E-32 T 11-11-2016 IPR000362 Fumarate lyase family SHALO_RS07200 00c26bf661ed2e6d2477b4c551061c7f 463 PRINTS PR00149 Fumarate lyase superfamily signature 270 297 1.4E-32 T 11-11-2016 IPR000362 Fumarate lyase family SHALO_RS07200 00c26bf661ed2e6d2477b4c551061c7f 463 PRINTS PR00149 Fumarate lyase superfamily signature 179 197 1.4E-32 T 11-11-2016 IPR000362 Fumarate lyase family SHALO_RS13675 41fd62348f9c9beb9cec924d0e70909e 83 Pfam PF00550 Phosphopantetheine attachment site 6 79 2.2E-9 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain SHALO_RS13675 41fd62348f9c9beb9cec924d0e70909e 83 Gene3D G3DSA:1.10.1200.10 5 82 5.8E-17 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain SHALO_RS13675 41fd62348f9c9beb9cec924d0e70909e 83 SUPERFAMILY SSF47336 5 81 8.64E-13 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain SHALO_RS07430 2f26c590f0ab9dd2ac287107affde5e4 423 PRINTS PR00045 Sigma-54 factor signature 392 410 6.8E-14 T 11-11-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 SHALO_RS07430 2f26c590f0ab9dd2ac287107affde5e4 423 PRINTS PR00045 Sigma-54 factor signature 153 170 6.8E-14 T 11-11-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 SHALO_RS07430 2f26c590f0ab9dd2ac287107affde5e4 423 PRINTS PR00045 Sigma-54 factor signature 337 348 6.8E-14 T 11-11-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 SHALO_RS07430 2f26c590f0ab9dd2ac287107affde5e4 423 PRINTS PR00045 Sigma-54 factor signature 321 333 6.8E-14 T 11-11-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 SHALO_RS07430 2f26c590f0ab9dd2ac287107affde5e4 423 Pfam PF04963 Sigma-54 factor, core binding domain 79 255 1.2E-32 T 11-11-2016 IPR007046 RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0006352 SHALO_RS07430 2f26c590f0ab9dd2ac287107affde5e4 423 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 9 416 1.3E-98 T 11-11-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 SHALO_RS07430 2f26c590f0ab9dd2ac287107affde5e4 423 PIRSF PIRSF000774 1 419 8.5E-69 T 11-11-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 SHALO_RS07430 2f26c590f0ab9dd2ac287107affde5e4 423 Pfam PF04552 Sigma-54, DNA binding domain 264 417 2.2E-45 T 11-11-2016 IPR007634 RNA polymerase sigma factor 54, DNA-binding SHALO_RS07430 2f26c590f0ab9dd2ac287107affde5e4 423 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 397 404 - T 11-11-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 SHALO_RS07430 2f26c590f0ab9dd2ac287107affde5e4 423 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 8 48 9.7E-10 T 11-11-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 SHALO_RS02900 f335f7a18b02c85f3e6bc190c8f0e003 237 Gene3D G3DSA:3.20.20.70 2 234 2.2E-63 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_RS02900 f335f7a18b02c85f3e6bc190c8f0e003 237 Pfam PF00121 Triosephosphate isomerase 2 229 3.0E-61 T 11-11-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SHALO_RS02900 f335f7a18b02c85f3e6bc190c8f0e003 237 SUPERFAMILY SSF51351 2 232 8.9E-61 T 11-11-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SHALO_RS02900 f335f7a18b02c85f3e6bc190c8f0e003 237 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 1 232 27.942 T 11-11-2016 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SHALO_RS02900 f335f7a18b02c85f3e6bc190c8f0e003 237 ProSitePatterns PS00171 Triosephosphate isomerase active site. 157 167 - T 11-11-2016 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SHALO_RS04030 b2e1a6f1e24e11e5fd8aed196fccb736 427 ProSitePatterns PS00885 EPSP synthase signature 2. 339 357 - T 11-11-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 SHALO_RS04030 b2e1a6f1e24e11e5fd8aed196fccb736 427 Gene3D G3DSA:3.65.10.10 233 423 1.7E-44 T 11-11-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 SHALO_RS04030 b2e1a6f1e24e11e5fd8aed196fccb736 427 PIRSF PIRSF000505 1 427 2.4E-103 T 11-11-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 SHALO_RS04030 b2e1a6f1e24e11e5fd8aed196fccb736 427 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 19 423 1.1E-119 T 11-11-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 SHALO_RS04030 b2e1a6f1e24e11e5fd8aed196fccb736 427 ProSitePatterns PS00104 EPSP synthase signature 1. 88 102 - T 11-11-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 SHALO_RS04030 b2e1a6f1e24e11e5fd8aed196fccb736 427 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 18 418 1.1E-109 T 11-11-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 SHALO_RS04030 b2e1a6f1e24e11e5fd8aed196fccb736 427 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 11 425 30.449 T 11-11-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 SHALO_RS04030 b2e1a6f1e24e11e5fd8aed196fccb736 427 Gene3D G3DSA:3.65.10.10 23 232 8.7E-46 T 11-11-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 SHALO_RS04030 b2e1a6f1e24e11e5fd8aed196fccb736 427 SUPERFAMILY SSF55205 19 423 4.09E-110 T 11-11-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 SHALO_RS04395 d48a889d28873b3833e616c7c831bc39 599 SUPERFAMILY SSF56519 39 230 1.07E-30 T 11-11-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 SHALO_RS04395 d48a889d28873b3833e616c7c831bc39 599 Gene3D G3DSA:3.90.1310.10 142 239 1.0E-20 T 11-11-2016 SHALO_RS04395 d48a889d28873b3833e616c7c831bc39 599 Pfam PF03717 Penicillin-binding Protein dimerisation domain 47 221 4.6E-26 T 11-11-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 SHALO_RS04395 d48a889d28873b3833e616c7c831bc39 599 Gene3D G3DSA:3.40.710.10 240 593 2.6E-93 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like SHALO_RS04395 d48a889d28873b3833e616c7c831bc39 599 Pfam PF00905 Penicillin binding protein transpeptidase domain 252 588 1.2E-61 T 11-11-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 SHALO_RS04395 d48a889d28873b3833e616c7c831bc39 599 SUPERFAMILY SSF56601 235 592 6.61E-85 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like SHALO_RS04395 d48a889d28873b3833e616c7c831bc39 599 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 2 592 1.3E-172 T 11-11-2016 IPR017790 Penicillin-binding protein 2 GO:0016020 SHALO_RS14590 07cd52a6ca8da486b5e9cd2ddaff7e74 329 SUPERFAMILY SSF51735 4 269 1.76E-49 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS14590 07cd52a6ca8da486b5e9cd2ddaff7e74 329 Gene3D G3DSA:3.40.50.720 5 241 3.6E-44 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS14590 07cd52a6ca8da486b5e9cd2ddaff7e74 329 Pfam PF02719 Polysaccharide biosynthesis protein 7 280 1.3E-103 T 11-11-2016 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain SHALO_RS14590 07cd52a6ca8da486b5e9cd2ddaff7e74 329 TIGRFAM TIGR03589 PseB: UDP-N-acetylglucosamine 4,6-dehydratase (inverting) 2 327 2.9E-167 T 11-11-2016 IPR020025 UDP-N-acetylglucosamine 4,6-dehydratase (inverting) KEGG: 00010+4.2.1.11|KEGG: 00520+4.2.1.115|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6143|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|MetaCyc: PWY-7330|MetaCyc: PWY-7331|MetaCyc: PWY-7332|MetaCyc: PWY-7719 SHALO_RS08895 61200553bf400cbd7e8798790bb312c3 578 Gene3D G3DSA:3.40.30.10 21 129 3.3E-28 T 11-11-2016 IPR012336 Thioredoxin-like fold SHALO_RS08895 61200553bf400cbd7e8798790bb312c3 578 Gene3D G3DSA:1.20.190.10 148 231 0.001 T 11-11-2016 IPR005639 Delta endotoxin, N-terminal GO:0009405 SHALO_RS08895 61200553bf400cbd7e8798790bb312c3 578 Pfam PF03190 Protein of unknown function, DUF255 3 165 3.6E-63 T 11-11-2016 IPR004879 Domain of unknown function DUF255 SHALO_RS08895 61200553bf400cbd7e8798790bb312c3 578 PIRSF PIRSF006402 1 578 1.4E-174 T 11-11-2016 IPR024705 Spermatogenesis-associated protein 20 SHALO_RS08895 61200553bf400cbd7e8798790bb312c3 578 SUPERFAMILY SSF52833 3 129 4.36E-30 T 11-11-2016 IPR012336 Thioredoxin-like fold SHALO_RS08895 61200553bf400cbd7e8798790bb312c3 578 Gene3D G3DSA:1.50.10.10 232 322 2.1E-9 T 11-11-2016 IPR012341 Six-hairpin glycosidase GO:0003824 SHALO_RS08895 61200553bf400cbd7e8798790bb312c3 578 SUPERFAMILY SSF48208 191 511 9.64E-44 T 11-11-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 SHALO_RS15140 d643a73884078d8f79460c809aff3006 513 Pfam PF02120 Flagellar hook-length control protein FliK 400 478 3.6E-11 T 11-11-2016 IPR021136 Flagellar hook-length control protein-like, C-terminal SHALO_RS11460 37421a804eccb756eae90443db1eaa6b 75 Pfam PF10543 ORF6N domain 14 69 7.6E-23 T 11-11-2016 IPR018873 KilA-N, DNA-binding domain SHALO_RS14220 c084d9672c6f53b7211b81556a577f58 221 Pfam PF00881 Nitroreductase family 8 196 1.5E-29 T 11-11-2016 IPR029479 Nitroreductase Reactome: R-HSA-209968 SHALO_RS14220 c084d9672c6f53b7211b81556a577f58 221 SUPERFAMILY SSF55469 1 219 1.83E-44 T 11-11-2016 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 SHALO_RS14220 c084d9672c6f53b7211b81556a577f58 221 Gene3D G3DSA:3.40.109.10 1 90 2.5E-45 T 11-11-2016 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 SHALO_RS14220 c084d9672c6f53b7211b81556a577f58 221 Gene3D G3DSA:3.40.109.10 122 220 2.5E-45 T 11-11-2016 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 SHALO_RS04520 63de76367087e1b5b31ed69e25ca7f3d 319 Pfam PF13183 4Fe-4S dicluster domain 147 218 5.3E-9 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_RS04520 63de76367087e1b5b31ed69e25ca7f3d 319 SUPERFAMILY SSF54292 2 105 3.34E-19 T 11-11-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 SHALO_RS04520 63de76367087e1b5b31ed69e25ca7f3d 319 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 51 59 - T 11-11-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 SHALO_RS04520 63de76367087e1b5b31ed69e25ca7f3d 319 SUPERFAMILY SSF46548 107 235 7.67E-22 T 11-11-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 SHALO_RS04520 63de76367087e1b5b31ed69e25ca7f3d 319 Gene3D G3DSA:1.10.1060.10 106 235 4.3E-20 T 11-11-2016 SHALO_RS04520 63de76367087e1b5b31ed69e25ca7f3d 319 Gene3D G3DSA:3.10.20.30 2 105 1.4E-23 T 11-11-2016 IPR012675 Beta-grasp domain SHALO_RS04520 63de76367087e1b5b31ed69e25ca7f3d 319 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 4 110 1.2E-23 T 11-11-2016 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_RS04520 63de76367087e1b5b31ed69e25ca7f3d 319 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 6 227 4.5E-50 T 11-11-2016 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_RS11530 9e8a0593a766387c5f23b793b5c80c00 591 Gene3D G3DSA:3.20.20.450 15 237 7.4E-46 T 11-11-2016 IPR001633 EAL domain SHALO_RS11530 9e8a0593a766387c5f23b793b5c80c00 591 SMART SM00052 7 241 4.3E-11 T 11-11-2016 IPR001633 EAL domain SHALO_RS11530 9e8a0593a766387c5f23b793b5c80c00 591 SUPERFAMILY SSF55073 405 526 1.88E-17 T 11-11-2016 IPR029787 Nucleotide cyclase SHALO_RS11530 9e8a0593a766387c5f23b793b5c80c00 591 Gene3D G3DSA:3.10.580.10 281 393 1.0E-4 T 11-11-2016 SHALO_RS11530 9e8a0593a766387c5f23b793b5c80c00 591 Gene3D G3DSA:3.30.70.270 403 527 2.7E-16 T 11-11-2016 SHALO_RS11530 9e8a0593a766387c5f23b793b5c80c00 591 SUPERFAMILY SSF141868 15 237 4.71E-52 T 11-11-2016 IPR001633 EAL domain SHALO_RS11530 9e8a0593a766387c5f23b793b5c80c00 591 Pfam PF00563 EAL domain 15 236 1.5E-41 T 11-11-2016 IPR001633 EAL domain SHALO_RS11530 9e8a0593a766387c5f23b793b5c80c00 591 SUPERFAMILY SSF54631 275 392 1.18E-5 T 11-11-2016 SHALO_RS11530 9e8a0593a766387c5f23b793b5c80c00 591 Pfam PF00990 Diguanylate cyclase, GGDEF domain 404 527 3.7E-12 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS11530 9e8a0593a766387c5f23b793b5c80c00 591 SMART SM00267 389 535 1.9E-4 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS11530 9e8a0593a766387c5f23b793b5c80c00 591 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 403 482 3.6E-11 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS07350 987e2a3460bd56e4b1ada3dd4dd7ff0f 291 SUPERFAMILY SSF48452 207 274 5.69E-6 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SHALO_RS07350 987e2a3460bd56e4b1ada3dd4dd7ff0f 291 Pfam PF12895 Anaphase-promoting complex, cyclosome, subunit 3 201 267 2.9E-6 T 11-11-2016 SHALO_RS05190 08caa552adbc18856e1e1c61e4b0c341 200 Pfam PF02661 Fic/DOC family 59 152 5.0E-17 T 11-11-2016 IPR003812 Fido domain SHALO_RS05190 08caa552adbc18856e1e1c61e4b0c341 200 Gene3D G3DSA:1.10.3290.10 36 193 1.9E-33 T 11-11-2016 IPR003812 Fido domain SHALO_RS05190 08caa552adbc18856e1e1c61e4b0c341 200 TIGRFAM TIGR02613 mob_myst_B: mobile mystery protein B 31 194 2.1E-48 T 11-11-2016 IPR013436 Mobile mystery protein B SHALO_RS05190 08caa552adbc18856e1e1c61e4b0c341 200 SUPERFAMILY SSF140931 55 197 2.09E-30 T 11-11-2016 IPR003812 Fido domain SHALO_RS14035 5e0d13a56a18d4dddcc022b5cd854bc7 896 Pfam PF00384 Molybdopterin oxidoreductase 108 601 5.0E-44 T 11-11-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS14035 5e0d13a56a18d4dddcc022b5cd854bc7 896 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 52 105 8.5E-14 T 11-11-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS14035 5e0d13a56a18d4dddcc022b5cd854bc7 896 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 7 38 1.2E-4 T 11-11-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal SHALO_RS14035 5e0d13a56a18d4dddcc022b5cd854bc7 896 Gene3D G3DSA:2.40.40.20 722 871 1.5E-34 T 11-11-2016 SHALO_RS14035 5e0d13a56a18d4dddcc022b5cd854bc7 896 Gene3D G3DSA:3.40.228.10 187 319 8.9E-52 T 11-11-2016 SHALO_RS14035 5e0d13a56a18d4dddcc022b5cd854bc7 896 Gene3D G3DSA:3.40.228.10 376 458 8.9E-52 T 11-11-2016 SHALO_RS14035 5e0d13a56a18d4dddcc022b5cd854bc7 896 Gene3D G3DSA:3.40.50.740 496 616 1.7E-37 T 11-11-2016 SHALO_RS14035 5e0d13a56a18d4dddcc022b5cd854bc7 896 Gene3D G3DSA:3.40.50.740 109 173 1.7E-37 T 11-11-2016 SHALO_RS14035 5e0d13a56a18d4dddcc022b5cd854bc7 896 Pfam PF01568 Molydopterin dinucleotide binding domain 742 846 1.1E-19 T 11-11-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 SHALO_RS14035 5e0d13a56a18d4dddcc022b5cd854bc7 896 SMART SM00926 51 105 2.0E-13 T 11-11-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS14035 5e0d13a56a18d4dddcc022b5cd854bc7 896 SUPERFAMILY SSF50692 682 866 1.35E-35 T 11-11-2016 IPR009010 Aspartate decarboxylase-like domain SHALO_RS14035 5e0d13a56a18d4dddcc022b5cd854bc7 896 SUPERFAMILY SSF53706 50 703 3.27E-130 T 11-11-2016 SHALO_RS14035 5e0d13a56a18d4dddcc022b5cd854bc7 896 Gene3D G3DSA:2.20.25.90 49 108 1.5E-18 T 11-11-2016 SHALO_RS01345 7277a8f302b08404e98e8b834ef566c7 610 Gene3D G3DSA:3.40.50.920 480 607 8.9E-24 T 11-11-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 SHALO_RS01345 7277a8f302b08404e98e8b834ef566c7 610 Pfam PF02779 Transketolase, pyrimidine binding domain 307 464 6.9E-31 T 11-11-2016 IPR005475 Transketolase-like, pyrimidine-binding domain SHALO_RS01345 7277a8f302b08404e98e8b834ef566c7 610 Gene3D G3DSA:3.40.50.970 218 288 5.0E-36 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold SHALO_RS01345 7277a8f302b08404e98e8b834ef566c7 610 Gene3D G3DSA:3.40.50.970 25 176 5.0E-36 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold SHALO_RS01345 7277a8f302b08404e98e8b834ef566c7 610 SMART SM00861 304 468 1.4E-54 T 11-11-2016 IPR005475 Transketolase-like, pyrimidine-binding domain SHALO_RS01345 7277a8f302b08404e98e8b834ef566c7 610 SUPERFAMILY SSF52518 229 366 7.42E-71 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold SHALO_RS01345 7277a8f302b08404e98e8b834ef566c7 610 SUPERFAMILY SSF52518 4 187 7.42E-71 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold SHALO_RS01345 7277a8f302b08404e98e8b834ef566c7 610 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 2 268 1.0E-99 T 11-11-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 SHALO_RS01345 7277a8f302b08404e98e8b834ef566c7 610 Pfam PF02780 Transketolase, C-terminal domain 479 600 3.9E-23 T 11-11-2016 IPR033248 Transketolase, C-terminal domain SHALO_RS01345 7277a8f302b08404e98e8b834ef566c7 610 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 3 609 5.1E-241 T 11-11-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 SHALO_RS01345 7277a8f302b08404e98e8b834ef566c7 610 SUPERFAMILY SSF52922 475 608 9.03E-24 T 11-11-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 SHALO_RS01345 7277a8f302b08404e98e8b834ef566c7 610 Gene3D G3DSA:3.40.50.970 289 479 7.5E-64 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold SHALO_RS01345 7277a8f302b08404e98e8b834ef566c7 610 ProSitePatterns PS00802 Transketolase signature 2. 410 426 - T 11-11-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 SHALO_RS01345 7277a8f302b08404e98e8b834ef566c7 610 SUPERFAMILY SSF52518 305 479 1.18E-45 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold SHALO_RS01345 7277a8f302b08404e98e8b834ef566c7 610 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 1 610 39.71 T 11-11-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 SHALO_RS04310 23c99ce9232e07de95a951adee122bb2 582 Pfam PF02938 GAD domain 309 405 4.1E-22 T 11-11-2016 IPR029351 GAD domain Reactome: R-HSA-379726 SHALO_RS04310 23c99ce9232e07de95a951adee122bb2 582 SUPERFAMILY SSF50249 1 106 8.57E-27 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold SHALO_RS04310 23c99ce9232e07de95a951adee122bb2 582 SUPERFAMILY SSF55681 112 293 4.02E-106 T 11-11-2016 SHALO_RS04310 23c99ce9232e07de95a951adee122bb2 582 SUPERFAMILY SSF55681 424 579 4.02E-106 T 11-11-2016 SHALO_RS04310 23c99ce9232e07de95a951adee122bb2 582 SUPERFAMILY SSF55261 290 419 1.19E-33 T 11-11-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 SHALO_RS04310 23c99ce9232e07de95a951adee122bb2 582 Pfam PF01336 OB-fold nucleic acid binding domain 18 100 4.4E-14 T 11-11-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 SHALO_RS04310 23c99ce9232e07de95a951adee122bb2 582 Pfam PF00152 tRNA synthetases class II (D, K and N) 120 552 5.0E-113 T 11-11-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 SHALO_RS04310 23c99ce9232e07de95a951adee122bb2 582 Gene3D G3DSA:3.30.1360.30 278 413 3.6E-41 T 11-11-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 SHALO_RS04310 23c99ce9232e07de95a951adee122bb2 582 Hamap MF_00044 Aspartate--tRNA(Asp) ligase [aspS]. 1 557 35.045 T 11-11-2016 SHALO_RS04310 23c99ce9232e07de95a951adee122bb2 582 Gene3D G3DSA:2.40.50.140 2 108 1.8E-30 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold SHALO_RS04310 23c99ce9232e07de95a951adee122bb2 582 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 2 576 8.6E-239 T 11-11-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 Reactome: R-HSA-379726 SHALO_RS04310 23c99ce9232e07de95a951adee122bb2 582 PRINTS PR01042 Aspartyl-tRNA synthetase signature 512 526 3.1E-26 T 11-11-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 SHALO_RS04310 23c99ce9232e07de95a951adee122bb2 582 PRINTS PR01042 Aspartyl-tRNA synthetase signature 468 484 3.1E-26 T 11-11-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 SHALO_RS04310 23c99ce9232e07de95a951adee122bb2 582 PRINTS PR01042 Aspartyl-tRNA synthetase signature 192 204 3.1E-26 T 11-11-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 SHALO_RS04310 23c99ce9232e07de95a951adee122bb2 582 PRINTS PR01042 Aspartyl-tRNA synthetase signature 209 222 3.1E-26 T 11-11-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 SHALO_RS04310 23c99ce9232e07de95a951adee122bb2 582 Gene3D G3DSA:3.30.930.10 414 579 3.7E-115 T 11-11-2016 SHALO_RS04310 23c99ce9232e07de95a951adee122bb2 582 Gene3D G3DSA:3.30.930.10 133 277 3.7E-115 T 11-11-2016 SHALO_RS00475 27d21798cf23d134280b0285a0e69e73 251 Pfam PF00795 Carbon-nitrogen hydrolase 40 235 4.6E-14 T 11-11-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 SHALO_RS00475 27d21798cf23d134280b0285a0e69e73 251 SUPERFAMILY SSF56317 3 239 1.22E-33 T 11-11-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 SHALO_RS00475 27d21798cf23d134280b0285a0e69e73 251 Gene3D G3DSA:3.60.110.10 4 241 1.9E-36 T 11-11-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 SHALO_RS02050 42699fc2892f87f2170e841ed9ccf64e 303 Gene3D G3DSA:3.20.20.70 26 252 5.1E-24 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_RS02050 42699fc2892f87f2170e841ed9ccf64e 303 Pfam PF04055 Radical SAM superfamily 25 186 1.0E-13 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SHALO_RS02050 42699fc2892f87f2170e841ed9ccf64e 303 SUPERFAMILY SSF102114 27 219 3.01E-23 T 11-11-2016 SHALO_RS02050 42699fc2892f87f2170e841ed9ccf64e 303 Pfam PF13353 4Fe-4S single cluster domain 27 126 5.5E-6 T 11-11-2016 SHALO_RS12160 0fbdb49f06774c7db3e8a6992e9ae553 131 Gene3D G3DSA:3.30.1490.10 75 131 1.7E-22 T 11-11-2016 SHALO_RS12160 0fbdb49f06774c7db3e8a6992e9ae553 131 ProSitePatterns PS00053 Ribosomal protein S8 signature. 101 118 - T 11-11-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_RS12160 0fbdb49f06774c7db3e8a6992e9ae553 131 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 1 131 27.044 T 11-11-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_RS12160 0fbdb49f06774c7db3e8a6992e9ae553 131 Pfam PF00410 Ribosomal protein S8 4 131 1.5E-44 T 11-11-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_RS12160 0fbdb49f06774c7db3e8a6992e9ae553 131 Gene3D G3DSA:3.30.1370.30 1 69 5.1E-22 T 11-11-2016 SHALO_RS12160 0fbdb49f06774c7db3e8a6992e9ae553 131 SUPERFAMILY SSF56047 1 131 3.92E-40 T 11-11-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_RS12205 49d2f732303836d4d0698cd7daf920ac 110 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 105 22.777 T 11-11-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS12205 49d2f732303836d4d0698cd7daf920ac 110 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 4 102 8.2E-35 T 11-11-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS12205 49d2f732303836d4d0698cd7daf920ac 110 Gene3D G3DSA:3.90.470.10 2 104 4.1E-30 T 11-11-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 SHALO_RS12205 49d2f732303836d4d0698cd7daf920ac 110 SUPERFAMILY SSF54843 3 103 1.44E-30 T 11-11-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 SHALO_RS12205 49d2f732303836d4d0698cd7daf920ac 110 ProSitePatterns PS00464 Ribosomal protein L22 signature. 78 102 - T 11-11-2016 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_RS12205 49d2f732303836d4d0698cd7daf920ac 110 Pfam PF00237 Ribosomal protein L22p/L17e 7 102 2.3E-22 T 11-11-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 SHALO_RS07145 fa7447597d8fa51806123b4159e1096c 745 PIRSF PIRSF009407 1 744 0.0 T 11-11-2016 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 SHALO_RS07145 fa7447597d8fa51806123b4159e1096c 745 Gene3D G3DSA:3.40.718.10 170 289 6.1E-37 T 11-11-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 SHALO_RS07145 fa7447597d8fa51806123b4159e1096c 745 Gene3D G3DSA:3.40.718.10 341 364 6.1E-37 T 11-11-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 SHALO_RS07145 fa7447597d8fa51806123b4159e1096c 745 Gene3D G3DSA:3.40.718.10 541 648 6.1E-37 T 11-11-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 SHALO_RS07145 fa7447597d8fa51806123b4159e1096c 745 SUPERFAMILY SSF53659 5 743 0.0 T 11-11-2016 SHALO_RS07145 fa7447597d8fa51806123b4159e1096c 745 TIGRFAM TIGR00178 monomer_idh: isocitrate dehydrogenase, NADP-dependent 2 744 0.0 T 11-11-2016 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 SHALO_RS07145 fa7447597d8fa51806123b4159e1096c 745 Pfam PF03971 Monomeric isocitrate dehydrogenase 7 741 0.0 T 11-11-2016 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 SHALO_RS07210 b752af105bead11a1872d9d5f2078771 146 SMART SM00248 58 87 0.064 T 11-11-2016 IPR002110 Ankyrin repeat GO:0005515 SHALO_RS07210 b752af105bead11a1872d9d5f2078771 146 SMART SM00248 91 120 0.24 T 11-11-2016 IPR002110 Ankyrin repeat GO:0005515 SHALO_RS07210 b752af105bead11a1872d9d5f2078771 146 SMART SM00248 25 54 0.024 T 11-11-2016 IPR002110 Ankyrin repeat GO:0005515 SHALO_RS07210 b752af105bead11a1872d9d5f2078771 146 SUPERFAMILY SSF48403 13 138 1.52E-30 T 11-11-2016 IPR020683 Ankyrin repeat-containing domain SHALO_RS07210 b752af105bead11a1872d9d5f2078771 146 Gene3D G3DSA:1.25.40.20 14 141 4.2E-29 T 11-11-2016 IPR020683 Ankyrin repeat-containing domain SHALO_RS07210 b752af105bead11a1872d9d5f2078771 146 Pfam PF00023 Ankyrin repeat 91 120 0.004 T 11-11-2016 IPR002110 Ankyrin repeat GO:0005515 SHALO_RS07210 b752af105bead11a1872d9d5f2078771 146 Pfam PF12796 Ankyrin repeats (3 copies) 8 89 8.1E-10 T 11-11-2016 IPR020683 Ankyrin repeat-containing domain SHALO_RS01510 100e213ff758ed4e2851772fec4a8d4b 840 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 311 429 4.5E-16 T 11-11-2016 IPR000014 PAS domain SHALO_RS01510 100e213ff758ed4e2851772fec4a8d4b 840 Gene3D G3DSA:3.20.20.450 593 835 3.0E-63 T 11-11-2016 IPR001633 EAL domain SHALO_RS01510 100e213ff758ed4e2851772fec4a8d4b 840 Pfam PF00563 EAL domain 597 827 1.3E-54 T 11-11-2016 IPR001633 EAL domain SHALO_RS01510 100e213ff758ed4e2851772fec4a8d4b 840 SMART SM00052 590 832 1.0E-44 T 11-11-2016 IPR001633 EAL domain SHALO_RS01510 100e213ff758ed4e2851772fec4a8d4b 840 Gene3D G3DSA:3.30.70.270 435 580 7.2E-14 T 11-11-2016 SHALO_RS01510 100e213ff758ed4e2851772fec4a8d4b 840 Gene3D G3DSA:3.30.450.20 323 423 8.1E-25 T 11-11-2016 SHALO_RS01510 100e213ff758ed4e2851772fec4a8d4b 840 SUPERFAMILY SSF55073 436 580 1.88E-17 T 11-11-2016 IPR029787 Nucleotide cyclase SHALO_RS01510 100e213ff758ed4e2851772fec4a8d4b 840 Pfam PF08447 PAS fold 333 417 8.0E-14 T 11-11-2016 IPR013655 PAS fold-3 GO:0005515 SHALO_RS01510 100e213ff758ed4e2851772fec4a8d4b 840 SUPERFAMILY SSF55785 322 421 1.12E-25 T 11-11-2016 IPR000014 PAS domain SHALO_RS01510 100e213ff758ed4e2851772fec4a8d4b 840 SMART SM00267 421 578 2.6E-7 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS01510 100e213ff758ed4e2851772fec4a8d4b 840 Pfam PF00990 Diguanylate cyclase, GGDEF domain 435 574 7.5E-10 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS01510 100e213ff758ed4e2851772fec4a8d4b 840 Pfam PF05228 CHASE4 domain 52 188 8.4E-18 T 11-11-2016 IPR007892 CHASE4 SHALO_RS01510 100e213ff758ed4e2851772fec4a8d4b 840 SMART SM00086 382 424 2.3E-5 T 11-11-2016 IPR001610 PAC motif SHALO_RS01510 100e213ff758ed4e2851772fec4a8d4b 840 SUPERFAMILY SSF141868 597 837 4.32E-61 T 11-11-2016 IPR001633 EAL domain SHALO_RS06520 388dc95c3af6b49f11b04678dcbbc066 157 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 91 102 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_RS06520 388dc95c3af6b49f11b04678dcbbc066 157 SUPERFAMILY SSF54862 1 149 1.88E-36 T 11-11-2016 SHALO_RS06520 388dc95c3af6b49f11b04678dcbbc066 157 Gene3D G3DSA:3.30.70.20 61 98 2.3E-14 T 11-11-2016 SHALO_RS06520 388dc95c3af6b49f11b04678dcbbc066 157 Pfam PF13247 4Fe-4S dicluster domain 54 144 7.5E-11 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_RS06520 388dc95c3af6b49f11b04678dcbbc066 157 Gene3D G3DSA:3.30.70.20 133 151 1.2E-15 T 11-11-2016 SHALO_RS06520 388dc95c3af6b49f11b04678dcbbc066 157 Gene3D G3DSA:3.30.70.20 5 60 1.2E-15 T 11-11-2016 SHALO_RS06520 388dc95c3af6b49f11b04678dcbbc066 157 Gene3D G3DSA:3.30.70.20 99 132 1.1E-7 T 11-11-2016 SHALO_RS11375 7cb35afc84c0e5aa4ac4e50681ded047 625 Gene3D G3DSA:3.30.565.10 476 623 1.0E-28 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS11375 7cb35afc84c0e5aa4ac4e50681ded047 625 Gene3D G3DSA:3.30.450.20 201 311 2.3E-32 T 11-11-2016 SHALO_RS11375 7cb35afc84c0e5aa4ac4e50681ded047 625 SMART SM01049 189 256 2.5E-6 T 11-11-2016 IPR033480 Single Cache domain 2 SHALO_RS11375 7cb35afc84c0e5aa4ac4e50681ded047 625 Pfam PF08269 Cache domain 39 310 2.2E-48 T 11-11-2016 IPR004010 Double Cache domain 2 SHALO_RS11375 7cb35afc84c0e5aa4ac4e50681ded047 625 PRINTS PR00344 Bacterial sensor protein C-terminal signature 557 571 9.5E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS11375 7cb35afc84c0e5aa4ac4e50681ded047 625 PRINTS PR00344 Bacterial sensor protein C-terminal signature 575 585 9.5E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS11375 7cb35afc84c0e5aa4ac4e50681ded047 625 PRINTS PR00344 Bacterial sensor protein C-terminal signature 588 606 9.5E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS11375 7cb35afc84c0e5aa4ac4e50681ded047 625 SUPERFAMILY SSF47384 399 473 1.24E-5 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS11375 7cb35afc84c0e5aa4ac4e50681ded047 625 Gene3D G3DSA:3.30.450.20 117 200 2.8E-4 T 11-11-2016 SHALO_RS11375 7cb35afc84c0e5aa4ac4e50681ded047 625 SMART SM00387 515 624 1.5E-16 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS11375 7cb35afc84c0e5aa4ac4e50681ded047 625 SUPERFAMILY SSF55874 473 621 1.44E-26 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS11375 7cb35afc84c0e5aa4ac4e50681ded047 625 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 520 623 6.3E-16 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS02030 34962de61518547211cae8bc8291f090 387 SUPERFAMILY SSF52540 136 377 5.21E-69 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS02030 34962de61518547211cae8bc8291f090 387 Pfam PF00158 Sigma-54 interaction domain 137 303 4.5E-70 T 11-11-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 SHALO_RS02030 34962de61518547211cae8bc8291f090 387 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 160 173 - T 11-11-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 SHALO_RS02030 34962de61518547211cae8bc8291f090 387 Gene3D G3DSA:3.40.50.300 133 308 3.6E-55 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS02030 34962de61518547211cae8bc8291f090 387 SMART SM00448 1 109 3.7E-30 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS02030 34962de61518547211cae8bc8291f090 387 Gene3D G3DSA:1.10.8.60 309 382 9.5E-21 T 11-11-2016 SHALO_RS02030 34962de61518547211cae8bc8291f090 387 Gene3D G3DSA:3.40.50.2300 1 128 4.9E-28 T 11-11-2016 SHALO_RS02030 34962de61518547211cae8bc8291f090 387 SUPERFAMILY SSF52172 1 181 6.83E-32 T 11-11-2016 IPR011006 CheY-like superfamily SHALO_RS02030 34962de61518547211cae8bc8291f090 387 Pfam PF00072 Response regulator receiver domain 3 110 1.1E-22 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS02030 34962de61518547211cae8bc8291f090 387 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 222 237 - T 11-11-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 SHALO_RS02030 34962de61518547211cae8bc8291f090 387 SMART SM00382 156 318 3.7E-7 T 11-11-2016 IPR003593 AAA+ ATPase domain SHALO_RS10680 3ddb1c068863cacfc67d1b219ec27273 218 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 85 96 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_RS10680 3ddb1c068863cacfc67d1b219ec27273 218 Gene3D G3DSA:3.30.70.20 7 61 5.4E-11 T 11-11-2016 SHALO_RS10680 3ddb1c068863cacfc67d1b219ec27273 218 Gene3D G3DSA:3.30.70.20 94 158 9.1E-14 T 11-11-2016 SHALO_RS10680 3ddb1c068863cacfc67d1b219ec27273 218 Gene3D G3DSA:3.30.70.20 62 93 4.3E-14 T 11-11-2016 SHALO_RS10680 3ddb1c068863cacfc67d1b219ec27273 218 SUPERFAMILY SSF54862 4 158 5.44E-32 T 11-11-2016 SHALO_RS10680 3ddb1c068863cacfc67d1b219ec27273 218 Pfam PF12838 4Fe-4S dicluster domain 85 153 7.2E-9 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_RS05815 fb13860b5cbb08aa5f000c345bc380a5 429 Pfam PF00072 Response regulator receiver domain 17 126 1.9E-25 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS05815 fb13860b5cbb08aa5f000c345bc380a5 429 SMART SM00091 169 237 1.0E-4 T 11-11-2016 IPR000014 PAS domain SHALO_RS05815 fb13860b5cbb08aa5f000c345bc380a5 429 Gene3D G3DSA:3.30.450.20 184 284 1.1E-23 T 11-11-2016 SHALO_RS05815 fb13860b5cbb08aa5f000c345bc380a5 429 SMART SM00448 15 126 2.2E-31 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS05815 fb13860b5cbb08aa5f000c345bc380a5 429 Pfam PF00989 PAS fold 182 281 6.8E-13 T 11-11-2016 IPR013767 PAS fold GO:0006355 SHALO_RS05815 fb13860b5cbb08aa5f000c345bc380a5 429 SUPERFAMILY SSF52172 14 180 4.7E-36 T 11-11-2016 IPR011006 CheY-like superfamily SHALO_RS05815 fb13860b5cbb08aa5f000c345bc380a5 429 SUPERFAMILY SSF55785 183 281 1.74E-24 T 11-11-2016 IPR000014 PAS domain SHALO_RS05815 fb13860b5cbb08aa5f000c345bc380a5 429 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 170 290 4.9E-17 T 11-11-2016 IPR000014 PAS domain SHALO_RS05815 fb13860b5cbb08aa5f000c345bc380a5 429 Gene3D G3DSA:3.40.50.2300 13 150 7.1E-35 T 11-11-2016 SHALO_RS00810 c66bc13e0b7fadd605f76fe2fa1fe4cc 172 PIRSF PIRSF001467 10 171 4.8E-62 T 11-11-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 SHALO_RS00810 c66bc13e0b7fadd605f76fe2fa1fe4cc 172 SUPERFAMILY SSF50891 10 171 4.68E-65 T 11-11-2016 IPR029000 Cyclophilin-like domain SHALO_RS00810 c66bc13e0b7fadd605f76fe2fa1fe4cc 172 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 103 118 5.8E-34 T 11-11-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SHALO_RS00810 c66bc13e0b7fadd605f76fe2fa1fe4cc 172 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 34 49 5.8E-34 T 11-11-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SHALO_RS00810 c66bc13e0b7fadd605f76fe2fa1fe4cc 172 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 60 72 5.8E-34 T 11-11-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SHALO_RS00810 c66bc13e0b7fadd605f76fe2fa1fe4cc 172 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 131 146 5.8E-34 T 11-11-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SHALO_RS00810 c66bc13e0b7fadd605f76fe2fa1fe4cc 172 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 130 5.8E-34 T 11-11-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SHALO_RS00810 c66bc13e0b7fadd605f76fe2fa1fe4cc 172 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 21 169 6.0E-55 T 11-11-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SHALO_RS00810 c66bc13e0b7fadd605f76fe2fa1fe4cc 172 Gene3D G3DSA:2.40.100.10 19 169 3.8E-69 T 11-11-2016 IPR029000 Cyclophilin-like domain SHALO_RS13785 87bab78ba27b6f9e6b96841785e3a288 311 Pfam PF13499 EF-hand domain pair 68 166 1.2E-7 T 11-11-2016 IPR002048 EF-hand domain GO:0005509 SHALO_RS13785 87bab78ba27b6f9e6b96841785e3a288 311 Pfam PF13202 EF hand 240 256 8.8E-4 T 11-11-2016 IPR002048 EF-hand domain GO:0005509 SHALO_RS13785 87bab78ba27b6f9e6b96841785e3a288 311 Gene3D G3DSA:1.10.238.10 138 180 1.3E-15 T 11-11-2016 IPR011992 EF-hand domain pair SHALO_RS13785 87bab78ba27b6f9e6b96841785e3a288 311 Gene3D G3DSA:1.10.238.10 26 78 1.3E-15 T 11-11-2016 IPR011992 EF-hand domain pair SHALO_RS13785 87bab78ba27b6f9e6b96841785e3a288 311 SUPERFAMILY SSF47473 146 259 3.37E-7 T 11-11-2016 IPR011992 EF-hand domain pair SHALO_RS13785 87bab78ba27b6f9e6b96841785e3a288 311 SMART SM00054 146 174 4.7 T 11-11-2016 IPR002048 EF-hand domain GO:0005509 SHALO_RS13785 87bab78ba27b6f9e6b96841785e3a288 311 SMART SM00054 235 263 30.0 T 11-11-2016 IPR002048 EF-hand domain GO:0005509 SHALO_RS13785 87bab78ba27b6f9e6b96841785e3a288 311 SMART SM00054 67 95 0.009 T 11-11-2016 IPR002048 EF-hand domain GO:0005509 SHALO_RS13785 87bab78ba27b6f9e6b96841785e3a288 311 SMART SM00054 32 60 6.7 T 11-11-2016 IPR002048 EF-hand domain GO:0005509 SHALO_RS13785 87bab78ba27b6f9e6b96841785e3a288 311 ProSitePatterns PS00018 EF-hand calcium-binding domain. 41 53 - T 11-11-2016 IPR018247 EF-Hand 1, calcium-binding site SHALO_RS13785 87bab78ba27b6f9e6b96841785e3a288 311 SUPERFAMILY SSF47473 27 171 6.45E-14 T 11-11-2016 IPR011992 EF-hand domain pair SHALO_RS13785 87bab78ba27b6f9e6b96841785e3a288 311 Gene3D G3DSA:1.10.238.10 226 255 1.0E-7 T 11-11-2016 IPR011992 EF-hand domain pair SHALO_RS13785 87bab78ba27b6f9e6b96841785e3a288 311 ProSitePatterns PS00018 EF-hand calcium-binding domain. 76 88 - T 11-11-2016 IPR018247 EF-Hand 1, calcium-binding site SHALO_RS13785 87bab78ba27b6f9e6b96841785e3a288 311 Gene3D G3DSA:1.10.238.10 79 132 6.5E-5 T 11-11-2016 IPR011992 EF-hand domain pair SHALO_RS11175 1b901a378ee6f3a1eee268a9b186cc5d 317 SUPERFAMILY SSF51735 2 317 2.46E-68 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS11175 1b901a378ee6f3a1eee268a9b186cc5d 317 Gene3D G3DSA:3.40.50.720 2 169 6.3E-48 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS11175 1b901a378ee6f3a1eee268a9b186cc5d 317 Gene3D G3DSA:3.40.50.720 211 261 6.3E-48 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS11175 1b901a378ee6f3a1eee268a9b186cc5d 317 Pfam PF01370 NAD dependent epimerase/dehydratase family 7 249 1.1E-80 T 11-11-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 SHALO_RS11175 1b901a378ee6f3a1eee268a9b186cc5d 317 Gene3D G3DSA:3.90.25.10 262 308 2.8E-39 T 11-11-2016 SHALO_RS11175 1b901a378ee6f3a1eee268a9b186cc5d 317 Gene3D G3DSA:3.90.25.10 170 210 2.8E-39 T 11-11-2016 SHALO_RS11175 1b901a378ee6f3a1eee268a9b186cc5d 317 Hamap MF_00956 GDP-L-fucose synthase [fcl]. 4 317 48.641 T 11-11-2016 IPR028614 GDP-L-fucose synthase/GDP-L-colitose synthase GO:0009226|GO:0016491 KEGG: 00010+1.1.1.27|KEGG: 00051+1.1.1.271|KEGG: 00270+1.1.1.27|KEGG: 00520+1.1.1.271|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-66|MetaCyc: PWY-6901|Reactome: R-HSA-6787639 SHALO_RS04810 e52711ea17de88b30054b279d26fa743 366 Pfam PF01926 50S ribosome-binding GTPase 5 123 2.2E-22 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 SHALO_RS04810 e52711ea17de88b30054b279d26fa743 366 PIRSF PIRSF006641 1 366 3.5E-152 T 11-11-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 SHALO_RS04810 e52711ea17de88b30054b279d26fa743 366 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 366 1.2E-144 T 11-11-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 SHALO_RS04810 e52711ea17de88b30054b279d26fa743 366 Gene3D G3DSA:3.40.50.300 5 131 3.8E-41 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS04810 e52711ea17de88b30054b279d26fa743 366 Gene3D G3DSA:3.40.50.300 203 268 3.8E-41 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS04810 e52711ea17de88b30054b279d26fa743 366 SUPERFAMILY SSF52540 4 304 1.33E-73 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS04810 e52711ea17de88b30054b279d26fa743 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 27 45 1.1E-34 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 SHALO_RS04810 e52711ea17de88b30054b279d26fa743 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 71 86 1.1E-34 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 SHALO_RS04810 e52711ea17de88b30054b279d26fa743 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 88 106 1.1E-34 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 SHALO_RS04810 e52711ea17de88b30054b279d26fa743 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 1.1E-34 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 SHALO_RS04810 e52711ea17de88b30054b279d26fa743 366 SUPERFAMILY SSF81271 282 363 8.28E-36 T 11-11-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 SHALO_RS04810 e52711ea17de88b30054b279d26fa743 366 Gene3D G3DSA:3.10.20.30 269 366 3.9E-48 T 11-11-2016 IPR012675 Beta-grasp domain SHALO_RS04810 e52711ea17de88b30054b279d26fa743 366 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 366 41.666 T 11-11-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 SHALO_RS04810 e52711ea17de88b30054b279d26fa743 366 Pfam PF06071 Protein of unknown function (DUF933) 282 365 3.3E-39 T 11-11-2016 IPR013029 Domain of unknown function DUF933 SHALO_RS04810 e52711ea17de88b30054b279d26fa743 366 Gene3D G3DSA:1.10.150.300 132 202 3.2E-17 T 11-11-2016 IPR023192 TGS-like domain SHALO_RS08615 32189c3103d9fdb90b67510e15689f73 628 SUPERFAMILY SSF53067 186 375 4.07E-63 T 11-11-2016 SHALO_RS08615 32189c3103d9fdb90b67510e15689f73 628 Gene3D G3DSA:3.30.30.30 53 107 6.8E-20 T 11-11-2016 SHALO_RS08615 32189c3103d9fdb90b67510e15689f73 628 SUPERFAMILY SSF100920 378 534 2.75E-60 T 11-11-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 SHALO_RS08615 32189c3103d9fdb90b67510e15689f73 628 SUPERFAMILY SSF100934 501 601 1.82E-15 T 11-11-2016 IPR029048 Heat shock protein 70kD, C-terminal domain Reactome: R-HSA-3371453 SHALO_RS08615 32189c3103d9fdb90b67510e15689f73 628 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 190 203 - T 11-11-2016 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 SHALO_RS08615 32189c3103d9fdb90b67510e15689f73 628 Gene3D G3DSA:2.60.34.10 384 525 1.5E-69 T 11-11-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 SHALO_RS08615 32189c3103d9fdb90b67510e15689f73 628 PRINTS PR00301 70kDa heat shock protein signature 31 43 3.8E-77 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 SHALO_RS08615 32189c3103d9fdb90b67510e15689f73 628 PRINTS PR00301 70kDa heat shock protein signature 328 344 3.8E-77 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 SHALO_RS08615 32189c3103d9fdb90b67510e15689f73 628 PRINTS PR00301 70kDa heat shock protein signature 3 16 3.8E-77 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 SHALO_RS08615 32189c3103d9fdb90b67510e15689f73 628 PRINTS PR00301 70kDa heat shock protein signature 137 157 3.8E-77 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 SHALO_RS08615 32189c3103d9fdb90b67510e15689f73 628 PRINTS PR00301 70kDa heat shock protein signature 463 479 3.8E-77 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 SHALO_RS08615 32189c3103d9fdb90b67510e15689f73 628 PRINTS PR00301 70kDa heat shock protein signature 359 379 3.8E-77 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 SHALO_RS08615 32189c3103d9fdb90b67510e15689f73 628 PRINTS PR00301 70kDa heat shock protein signature 382 401 3.8E-77 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 SHALO_RS08615 32189c3103d9fdb90b67510e15689f73 628 PRINTS PR00301 70kDa heat shock protein signature 54 62 3.8E-77 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 SHALO_RS08615 32189c3103d9fdb90b67510e15689f73 628 PRINTS PR00301 70kDa heat shock protein signature 196 206 3.8E-77 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 SHALO_RS08615 32189c3103d9fdb90b67510e15689f73 628 Pfam PF00012 Hsp70 protein 4 600 6.9E-247 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 SHALO_RS08615 32189c3103d9fdb90b67510e15689f73 628 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 625 35.728 T 11-11-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453 SHALO_RS08615 32189c3103d9fdb90b67510e15689f73 628 Gene3D G3DSA:1.20.1270.10 526 599 5.5E-27 T 11-11-2016 IPR029048 Heat shock protein 70kD, C-terminal domain Reactome: R-HSA-3371453 SHALO_RS08615 32189c3103d9fdb90b67510e15689f73 628 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 331 345 - T 11-11-2016 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 SHALO_RS08615 32189c3103d9fdb90b67510e15689f73 628 Gene3D G3DSA:3.30.420.40 191 223 6.7E-32 T 11-11-2016 SHALO_RS08615 32189c3103d9fdb90b67510e15689f73 628 Gene3D G3DSA:3.30.420.40 313 354 6.7E-32 T 11-11-2016 SHALO_RS08615 32189c3103d9fdb90b67510e15689f73 628 SUPERFAMILY SSF53067 1 182 2.2E-62 T 11-11-2016 SHALO_RS08615 32189c3103d9fdb90b67510e15689f73 628 Gene3D G3DSA:3.90.640.10 224 307 1.7E-31 T 11-11-2016 SHALO_RS08615 32189c3103d9fdb90b67510e15689f73 628 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 11-11-2016 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 SHALO_RS08615 32189c3103d9fdb90b67510e15689f73 628 Gene3D G3DSA:3.30.420.40 118 190 1.1E-65 T 11-11-2016 SHALO_RS08615 32189c3103d9fdb90b67510e15689f73 628 Gene3D G3DSA:3.30.420.40 4 52 1.1E-65 T 11-11-2016 SHALO_RS08615 32189c3103d9fdb90b67510e15689f73 628 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 600 1.6E-288 T 11-11-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453 SHALO_RS08865 f98452b01c2761156ce1187e3f441a03 81 Gene3D G3DSA:3.30.1280.10 1 77 1.8E-33 T 11-11-2016 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 SHALO_RS08865 f98452b01c2761156ce1187e3f441a03 81 TIGRFAM TIGR00302 TIGR00302: phosphoribosylformylglycinamidine synthase, purS protein 1 78 7.8E-30 T 11-11-2016 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 SHALO_RS08865 f98452b01c2761156ce1187e3f441a03 81 Pfam PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase 2 77 9.6E-32 T 11-11-2016 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 SHALO_RS08865 f98452b01c2761156ce1187e3f441a03 81 ProDom PD010362 PHOSPHORIBOSYLFORMYLGLYCINAMIDINE PURS SYNTHETASE SYNTHASE COMPONENT SYNTHASE LIGASE FGAM UPF0062 I 9 77 3.0E-23 T 11-11-2016 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 SHALO_RS08865 f98452b01c2761156ce1187e3f441a03 81 SUPERFAMILY SSF82697 1 77 5.76E-29 T 11-11-2016 SHALO_RS08865 f98452b01c2761156ce1187e3f441a03 81 Hamap MF_01926 Phosphoribosylformylglycinamidine synthase subunit PurS [purS]. 1 78 20.955 T 11-11-2016 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 SHALO_RS06375 b3fbff2f97edbacb8292fb2c554d439d 158 Gene3D G3DSA:3.40.630.30 2 144 1.1E-24 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase SHALO_RS06375 b3fbff2f97edbacb8292fb2c554d439d 158 Pfam PF13302 Acetyltransferase (GNAT) domain 5 138 1.2E-17 T 11-11-2016 IPR000182 GNAT domain GO:0008080 SHALO_RS06375 b3fbff2f97edbacb8292fb2c554d439d 158 SUPERFAMILY SSF55729 2 142 5.1E-24 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase SHALO_RS03700 38e2d32d6b39dc46045c49fc7caa5371 223 SUPERFAMILY SSF46894 134 222 5.67E-20 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SHALO_RS03700 38e2d32d6b39dc46045c49fc7caa5371 223 Gene3D G3DSA:1.10.10.10 149 222 5.4E-23 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS03700 38e2d32d6b39dc46045c49fc7caa5371 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 221 3.1E-17 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS03700 38e2d32d6b39dc46045c49fc7caa5371 223 SMART SM00448 2 111 4.5E-31 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS03700 38e2d32d6b39dc46045c49fc7caa5371 223 SMART SM00862 146 221 3.7E-16 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS03700 38e2d32d6b39dc46045c49fc7caa5371 223 SUPERFAMILY SSF52172 1 128 3.84E-33 T 11-11-2016 IPR011006 CheY-like superfamily SHALO_RS03700 38e2d32d6b39dc46045c49fc7caa5371 223 Gene3D G3DSA:3.40.50.2300 1 148 9.7E-36 T 11-11-2016 SHALO_RS03700 38e2d32d6b39dc46045c49fc7caa5371 223 Pfam PF00072 Response regulator receiver domain 4 112 3.1E-22 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS01385 1065a4f1e0b50b1180e386729b60a129 330 SUPERFAMILY SSF53659 1 325 3.78E-91 T 11-11-2016 SHALO_RS01385 1065a4f1e0b50b1180e386729b60a129 330 PIRSF PIRSF002465 1 330 2.7E-121 T 11-11-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 SHALO_RS01385 1065a4f1e0b50b1180e386729b60a129 330 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 330 132.888 T 11-11-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 SHALO_RS01385 1065a4f1e0b50b1180e386729b60a129 330 Pfam PF02504 Fatty acid synthesis protein 3 315 3.2E-106 T 11-11-2016 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 SHALO_RS01385 1065a4f1e0b50b1180e386729b60a129 330 Gene3D G3DSA:3.40.718.10 1 326 2.0E-121 T 11-11-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 SHALO_RS01385 1065a4f1e0b50b1180e386729b60a129 330 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 3 327 9.6E-111 T 11-11-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 SHALO_RS03370 43ce9bef94d83afb6bbeaa0c075df6c5 481 SUPERFAMILY SSF51621 158 343 2.41E-91 T 11-11-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SHALO_RS03370 43ce9bef94d83afb6bbeaa0c075df6c5 481 SUPERFAMILY SSF51621 2 75 2.41E-91 T 11-11-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SHALO_RS03370 43ce9bef94d83afb6bbeaa0c075df6c5 481 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 3 467 1.1E-146 T 11-11-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 SHALO_RS03370 43ce9bef94d83afb6bbeaa0c075df6c5 481 Gene3D G3DSA:3.20.20.60 3 73 1.2E-96 T 11-11-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SHALO_RS03370 43ce9bef94d83afb6bbeaa0c075df6c5 481 Gene3D G3DSA:3.20.20.60 170 328 1.2E-96 T 11-11-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SHALO_RS03370 43ce9bef94d83afb6bbeaa0c075df6c5 481 Pfam PF00224 Pyruvate kinase, barrel domain 3 339 3.0E-121 T 11-11-2016 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 SHALO_RS03370 43ce9bef94d83afb6bbeaa0c075df6c5 481 Gene3D G3DSA:3.40.1380.20 329 467 7.2E-32 T 11-11-2016 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 SHALO_RS03370 43ce9bef94d83afb6bbeaa0c075df6c5 481 SUPERFAMILY SSF50800 71 169 6.98E-20 T 11-11-2016 IPR011037 Pyruvate kinase-like, insert domain SHALO_RS03370 43ce9bef94d83afb6bbeaa0c075df6c5 481 SUPERFAMILY SSF52935 326 468 8.11E-29 T 11-11-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 SHALO_RS03370 43ce9bef94d83afb6bbeaa0c075df6c5 481 Gene3D G3DSA:2.40.33.10 74 169 1.5E-20 T 11-11-2016 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 SHALO_RS03370 43ce9bef94d83afb6bbeaa0c075df6c5 481 PRINTS PR01050 Pyruvate kinase family signature 270 294 6.1E-59 T 11-11-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 SHALO_RS03370 43ce9bef94d83afb6bbeaa0c075df6c5 481 PRINTS PR01050 Pyruvate kinase family signature 314 330 6.1E-59 T 11-11-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 SHALO_RS03370 43ce9bef94d83afb6bbeaa0c075df6c5 481 PRINTS PR01050 Pyruvate kinase family signature 218 244 6.1E-59 T 11-11-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 SHALO_RS03370 43ce9bef94d83afb6bbeaa0c075df6c5 481 PRINTS PR01050 Pyruvate kinase family signature 60 76 6.1E-59 T 11-11-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 SHALO_RS03370 43ce9bef94d83afb6bbeaa0c075df6c5 481 PRINTS PR01050 Pyruvate kinase family signature 188 202 6.1E-59 T 11-11-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 SHALO_RS03370 43ce9bef94d83afb6bbeaa0c075df6c5 481 PRINTS PR01050 Pyruvate kinase family signature 245 269 6.1E-59 T 11-11-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 SHALO_RS03370 43ce9bef94d83afb6bbeaa0c075df6c5 481 PRINTS PR01050 Pyruvate kinase family signature 295 313 6.1E-59 T 11-11-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 SHALO_RS03370 43ce9bef94d83afb6bbeaa0c075df6c5 481 Pfam PF02887 Pyruvate kinase, alpha/beta domain 357 468 8.2E-27 T 11-11-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 SHALO_RS12760 71ba693b0b6366980d64a50f7ea64988 315 SMART SM00062 51 284 0.0075 T 11-11-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SHALO_RS12760 71ba693b0b6366980d64a50f7ea64988 315 Gene3D G3DSA:3.40.190.10 139 239 5.5E-10 T 11-11-2016 SHALO_RS12760 71ba693b0b6366980d64a50f7ea64988 315 TIGRFAM TIGR01098 3A0109s03R: phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein 5 270 4.9E-76 T 11-11-2016 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein GO:0043190|GO:0055085 SHALO_RS12760 71ba693b0b6366980d64a50f7ea64988 315 SUPERFAMILY SSF53850 51 310 7.86E-46 T 11-11-2016 SHALO_RS12760 71ba693b0b6366980d64a50f7ea64988 315 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 54 291 6.2E-53 T 11-11-2016 SHALO_RS09820 6d1e8d224b8e62f5875e4e78f0abbca9 648 Gene3D G3DSA:3.30.300.30 517 624 1.1E-26 T 11-11-2016 SHALO_RS09820 6d1e8d224b8e62f5875e4e78f0abbca9 648 SUPERFAMILY SSF56801 9 642 1.57E-175 T 11-11-2016 SHALO_RS09820 6d1e8d224b8e62f5875e4e78f0abbca9 648 Pfam PF13193 AMP-binding enzyme C-terminal domain 531 611 2.1E-21 T 11-11-2016 IPR025110 AMP-binding enzyme C-terminal domain SHALO_RS09820 6d1e8d224b8e62f5875e4e78f0abbca9 648 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 18 644 9.2E-296 T 11-11-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: R-HSA-71384 SHALO_RS09820 6d1e8d224b8e62f5875e4e78f0abbca9 648 Pfam PF00501 AMP-binding enzyme 82 522 3.2E-89 T 11-11-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 SHALO_RS09820 6d1e8d224b8e62f5875e4e78f0abbca9 648 ProSitePatterns PS00455 Putative AMP-binding domain signature. 257 268 - T 11-11-2016 IPR020845 AMP-binding, conserved site SHALO_RS09820 6d1e8d224b8e62f5875e4e78f0abbca9 648 Gene3D G3DSA:3.40.50.980 262 426 2.6E-29 T 11-11-2016 SHALO_RS09820 6d1e8d224b8e62f5875e4e78f0abbca9 648 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 1 646 50.155 T 11-11-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: R-HSA-71384 SHALO_RS09820 6d1e8d224b8e62f5875e4e78f0abbca9 648 Gene3D G3DSA:3.40.50.980 75 261 1.2E-39 T 11-11-2016 SHALO_RS09820 6d1e8d224b8e62f5875e4e78f0abbca9 648 Gene3D G3DSA:2.30.38.10 436 516 5.6E-10 T 11-11-2016 SHALO_RS09820 6d1e8d224b8e62f5875e4e78f0abbca9 648 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 23 78 2.0E-18 T 11-11-2016 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 SHALO_RS11670 2835f4736d3bca45e6eb222a31c0f782 231 PRINTS PR01703 Manganese superoxide dismutase signature 149 157 2.1E-24 T 11-11-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 SHALO_RS11670 2835f4736d3bca45e6eb222a31c0f782 231 PRINTS PR01703 Manganese superoxide dismutase signature 95 108 2.1E-24 T 11-11-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 SHALO_RS11670 2835f4736d3bca45e6eb222a31c0f782 231 PRINTS PR01703 Manganese superoxide dismutase signature 32 43 2.1E-24 T 11-11-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 SHALO_RS11670 2835f4736d3bca45e6eb222a31c0f782 231 PRINTS PR01703 Manganese superoxide dismutase signature 190 202 2.1E-24 T 11-11-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 SHALO_RS11670 2835f4736d3bca45e6eb222a31c0f782 231 PRINTS PR01703 Manganese superoxide dismutase signature 53 66 2.1E-24 T 11-11-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 SHALO_RS11670 2835f4736d3bca45e6eb222a31c0f782 231 SUPERFAMILY SSF46609 23 113 4.06E-34 T 11-11-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 SHALO_RS11670 2835f4736d3bca45e6eb222a31c0f782 231 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 29 112 3.7E-30 T 11-11-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 SHALO_RS11670 2835f4736d3bca45e6eb222a31c0f782 231 SUPERFAMILY SSF54719 116 230 6.81E-44 T 11-11-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 SHALO_RS11670 2835f4736d3bca45e6eb222a31c0f782 231 PIRSF PIRSF000349 3 231 9.4E-82 T 11-11-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 SHALO_RS11670 2835f4736d3bca45e6eb222a31c0f782 231 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 120 225 1.1E-40 T 11-11-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 SHALO_RS11670 2835f4736d3bca45e6eb222a31c0f782 231 Gene3D G3DSA:1.10.287.990 46 112 8.1E-28 T 11-11-2016 SHALO_RS11670 2835f4736d3bca45e6eb222a31c0f782 231 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 192 199 - T 11-11-2016 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 SHALO_RS07255 514bf97417ed866806e74096ef2b1cb2 419 Gene3D G3DSA:3.30.830.10 238 413 1.2E-24 T 11-11-2016 IPR011237 Peptidase M16 domain GO:0046872 SHALO_RS07255 514bf97417ed866806e74096ef2b1cb2 419 Gene3D G3DSA:3.30.830.10 10 226 3.0E-54 T 11-11-2016 IPR011237 Peptidase M16 domain GO:0046872 SHALO_RS07255 514bf97417ed866806e74096ef2b1cb2 419 SUPERFAMILY SSF63411 5 213 4.0E-58 T 11-11-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 SHALO_RS07255 514bf97417ed866806e74096ef2b1cb2 419 Pfam PF00675 Insulinase (Peptidase family M16) 25 134 1.6E-22 T 11-11-2016 IPR011765 Peptidase M16, N-terminal SHALO_RS07255 514bf97417ed866806e74096ef2b1cb2 419 Pfam PF05193 Peptidase M16 inactive domain 173 350 6.9E-33 T 11-11-2016 IPR007863 Peptidase M16, C-terminal SHALO_RS07255 514bf97417ed866806e74096ef2b1cb2 419 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 40 63 - T 11-11-2016 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 SHALO_RS07255 514bf97417ed866806e74096ef2b1cb2 419 SUPERFAMILY SSF63411 231 415 1.23E-30 T 11-11-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 SHALO_RS13790 3d9d0a6a618d39e712cf1236c4e315b5 768 SMART SM00965 44 94 0.0018 T 11-11-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 SHALO_RS13790 3d9d0a6a618d39e712cf1236c4e315b5 768 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 137 768 2.5E-89 T 11-11-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 SHALO_RS13790 3d9d0a6a618d39e712cf1236c4e315b5 768 Pfam PF07715 TonB-dependent Receptor Plug Domain 135 235 1.5E-11 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SHALO_RS13790 3d9d0a6a618d39e712cf1236c4e315b5 768 SUPERFAMILY SSF56935 98 768 1.72E-108 T 11-11-2016 SHALO_RS13790 3d9d0a6a618d39e712cf1236c4e315b5 768 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 751 768 - T 11-11-2016 IPR010917 TonB-dependent receptor, conserved site SHALO_RS13790 3d9d0a6a618d39e712cf1236c4e315b5 768 Gene3D G3DSA:2.40.170.20 250 768 7.9E-110 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SHALO_RS13790 3d9d0a6a618d39e712cf1236c4e315b5 768 Gene3D G3DSA:2.170.130.10 114 242 2.5E-29 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SHALO_RS13790 3d9d0a6a618d39e712cf1236c4e315b5 768 Pfam PF00593 TonB dependent receptor 540 767 6.4E-19 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SHALO_RS07790 d1a7d86d5b151c08fa5ab33f27e25546 72 Pfam PF01863 Protein of unknown function DUF45 6 65 1.8E-21 T 11-11-2016 IPR002725 Protein of unknown function DUF45 SHALO_RS02070 7b3c4666f586adf955a4fc0f1e080029 401 Gene3D G3DSA:1.10.443.10 214 380 1.0E-21 T 11-11-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 SHALO_RS02070 7b3c4666f586adf955a4fc0f1e080029 401 Gene3D G3DSA:1.10.150.130 102 192 3.4E-8 T 11-11-2016 IPR023109 Integrase/recombinase, N-terminal SHALO_RS02070 7b3c4666f586adf955a4fc0f1e080029 401 SUPERFAMILY SSF56349 102 389 3.53E-48 T 11-11-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 SHALO_RS02070 7b3c4666f586adf955a4fc0f1e080029 401 Pfam PF00589 Phage integrase family 215 379 1.7E-19 T 11-11-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 SHALO_RS02070 7b3c4666f586adf955a4fc0f1e080029 401 Pfam PF13356 Domain of unknown function (DUF4102) 6 90 1.1E-14 T 11-11-2016 IPR025166 Domain of unknown function DUF4102 SHALO_RS06720 124a1576926d5a8f81bc542154aab21a 367 Gene3D G3DSA:1.10.287.950 65 249 1.1E-43 T 11-11-2016 SHALO_RS06720 124a1576926d5a8f81bc542154aab21a 367 SUPERFAMILY SSF58104 23 274 3.27E-50 T 11-11-2016 SHALO_RS06720 124a1576926d5a8f81bc542154aab21a 367 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 126 251 1.4E-33 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SHALO_RS06720 124a1576926d5a8f81bc542154aab21a 367 SMART SM00283 43 266 7.4E-20 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SHALO_RS06720 124a1576926d5a8f81bc542154aab21a 367 Pfam PF13682 Chemoreceptor zinc-binding domain 260 323 3.8E-10 T 11-11-2016 IPR025991 Chemoreceptor zinc-binding domain SHALO_RS00520 b9c7b308bf15ca63a4a54398455518b2 204 SUPERFAMILY SSF56529 10 186 2.49E-43 T 11-11-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 SHALO_RS00520 b9c7b308bf15ca63a4a54398455518b2 204 Gene3D G3DSA:3.90.850.10 11 187 7.3E-44 T 11-11-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 SHALO_RS00520 b9c7b308bf15ca63a4a54398455518b2 204 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 15 178 7.4E-27 T 11-11-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 SHALO_RS09935 d081329ca80c08c5722919e65d94b777 611 SMART SM00490 389 486 9.2E-7 T 11-11-2016 IPR001650 Helicase, C-terminal SHALO_RS09935 d081329ca80c08c5722919e65d94b777 611 SMART SM00487 107 299 2.9E-16 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SHALO_RS09935 d081329ca80c08c5722919e65d94b777 611 Gene3D G3DSA:3.40.50.300 108 270 5.1E-36 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS09935 d081329ca80c08c5722919e65d94b777 611 Hamap MF_00983 Probable primosomal protein N' [priA]. 6 610 19.577 T 11-11-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 SHALO_RS09935 d081329ca80c08c5722919e65d94b777 611 TIGRFAM TIGR00595 priA: primosomal protein N' 129 596 3.6E-149 T 11-11-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 SHALO_RS09935 d081329ca80c08c5722919e65d94b777 611 SUPERFAMILY SSF52540 123 337 4.46E-34 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS09935 d081329ca80c08c5722919e65d94b777 611 SUPERFAMILY SSF52540 400 488 4.46E-34 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS09935 d081329ca80c08c5722919e65d94b777 611 Pfam PF00270 DEAD/DEAH box helicase 115 268 4.0E-13 T 11-11-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SHALO_RS09935 d081329ca80c08c5722919e65d94b777 611 Gene3D G3DSA:3.40.50.300 304 325 3.0E-21 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS09935 d081329ca80c08c5722919e65d94b777 611 Gene3D G3DSA:3.40.50.300 390 498 3.0E-21 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS09935 d081329ca80c08c5722919e65d94b777 611 Pfam PF00271 Helicase conserved C-terminal domain 414 486 4.7E-6 T 11-11-2016 IPR001650 Helicase, C-terminal SHALO_RS01230 aec3901e7da0a06316ae68dc93220ec2 343 Gene3D G3DSA:3.40.50.2000 142 285 1.9E-4 T 11-11-2016 SHALO_RS01230 aec3901e7da0a06316ae68dc93220ec2 343 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 4 328 1.8E-65 T 11-11-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622 SHALO_RS01230 aec3901e7da0a06316ae68dc93220ec2 343 Pfam PF02684 Lipid-A-disaccharide synthetase 4 308 7.6E-73 T 11-11-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622 SHALO_RS01230 aec3901e7da0a06316ae68dc93220ec2 343 SUPERFAMILY SSF53756 15 324 5.65E-12 T 11-11-2016 SHALO_RS01000 4658bf47645c03b780349bdd562cbbf5 472 Gene3D G3DSA:3.40.309.10 258 445 8.9E-62 T 11-11-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 SHALO_RS01000 4658bf47645c03b780349bdd562cbbf5 472 Gene3D G3DSA:3.40.605.10 6 257 6.0E-70 T 11-11-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 SHALO_RS01000 4658bf47645c03b780349bdd562cbbf5 472 SUPERFAMILY SSF53720 4 471 1.83E-136 T 11-11-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 SHALO_RS01000 4658bf47645c03b780349bdd562cbbf5 472 Pfam PF00171 Aldehyde dehydrogenase family 19 470 7.3E-146 T 11-11-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 SHALO_RS01000 4658bf47645c03b780349bdd562cbbf5 472 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 243 250 - T 11-11-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 SHALO_RS10755 9445d8483082281a3e869fc557df6bef 75 Gene3D G3DSA:3.10.20.30 1 75 2.8E-15 T 11-11-2016 IPR012675 Beta-grasp domain SHALO_RS10755 9445d8483082281a3e869fc557df6bef 75 SUPERFAMILY SSF54285 3 75 3.18E-12 T 11-11-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp SHALO_RS10755 9445d8483082281a3e869fc557df6bef 75 Pfam PF02597 ThiS family 5 75 1.0E-12 T 11-11-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 Reactome: R-HSA-947581 SHALO_RS11410 2908d61fcb85b086a82438b3f1129ff7 404 SMART SM00825 Beta-ketoacyl synthase 4 404 8.1E-12 T 11-11-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain SHALO_RS11410 2908d61fcb85b086a82438b3f1129ff7 404 SUPERFAMILY SSF53901 212 403 1.43E-65 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SHALO_RS11410 2908d61fcb85b086a82438b3f1129ff7 404 SUPERFAMILY SSF53901 2 249 3.38E-64 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SHALO_RS11410 2908d61fcb85b086a82438b3f1129ff7 404 Gene3D G3DSA:3.40.47.10 261 403 6.0E-56 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SHALO_RS11410 2908d61fcb85b086a82438b3f1129ff7 404 PIRSF PIRSF000447 1 404 8.7E-156 T 11-11-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 SHALO_RS11410 2908d61fcb85b086a82438b3f1129ff7 404 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 252 361 1.5E-30 T 11-11-2016 IPR014031 Beta-ketoacyl synthase, C-terminal SHALO_RS11410 2908d61fcb85b086a82438b3f1129ff7 404 Gene3D G3DSA:3.40.47.10 2 255 8.0E-65 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SHALO_RS11410 2908d61fcb85b086a82438b3f1129ff7 404 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 2 402 3.1E-171 T 11-11-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 SHALO_RS11410 2908d61fcb85b086a82438b3f1129ff7 404 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 2 244 5.9E-49 T 11-11-2016 IPR014030 Beta-ketoacyl synthase, N-terminal SHALO_RS03325 dd0327fc5938a3db62f53c0d8becd4c5 733 SUPERFAMILY SSF52540 274 488 1.95E-25 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS03325 dd0327fc5938a3db62f53c0d8becd4c5 733 SMART SM00534 301 485 4.0E-28 T 11-11-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 SHALO_RS03325 dd0327fc5938a3db62f53c0d8becd4c5 733 Pfam PF01713 Smr domain 659 733 3.7E-17 T 11-11-2016 IPR002625 Smr domain SHALO_RS03325 dd0327fc5938a3db62f53c0d8becd4c5 733 Gene3D G3DSA:3.40.50.300 274 487 2.8E-36 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS03325 dd0327fc5938a3db62f53c0d8becd4c5 733 SMART SM00463 656 733 1.3E-7 T 11-11-2016 IPR002625 Smr domain SHALO_RS03325 dd0327fc5938a3db62f53c0d8becd4c5 733 SUPERFAMILY SSF48334 50 265 5.23E-5 T 11-11-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 SHALO_RS03325 dd0327fc5938a3db62f53c0d8becd4c5 733 Pfam PF00488 MutS domain V 305 482 4.5E-17 T 11-11-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 SHALO_RS03325 dd0327fc5938a3db62f53c0d8becd4c5 733 SUPERFAMILY SSF160443 657 732 4.18E-11 T 11-11-2016 IPR002625 Smr domain SHALO_RS03325 dd0327fc5938a3db62f53c0d8becd4c5 733 PIRSF PIRSF005814 32 733 3.7E-98 T 11-11-2016 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 SHALO_RS03325 dd0327fc5938a3db62f53c0d8becd4c5 733 SMART SM00533 2 292 2.3E-5 T 11-11-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 SHALO_RS03325 dd0327fc5938a3db62f53c0d8becd4c5 733 Hamap MF_00092 Endonuclease MutS2 [mutS2]. 1 733 18.739 T 11-11-2016 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 SHALO_RS07055 a26934af02d4e48a7443e1be2c6d02d2 582 ProSitePatterns PS00508 Nickel-dependent hydrogenases large subunit signature 2. 552 561 - T 11-11-2016 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 SHALO_RS07055 a26934af02d4e48a7443e1be2c6d02d2 582 Pfam PF00374 Nickel-dependent hydrogenase 40 561 1.1E-206 T 11-11-2016 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 SHALO_RS07055 a26934af02d4e48a7443e1be2c6d02d2 582 SUPERFAMILY SSF56762 1 561 5.1E-162 T 11-11-2016 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS07055 a26934af02d4e48a7443e1be2c6d02d2 582 ProSitePatterns PS00507 Nickel-dependent hydrogenases large subunit signature 1. 40 65 - T 11-11-2016 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 SHALO_RS07055 a26934af02d4e48a7443e1be2c6d02d2 582 Gene3D G3DSA:1.10.645.10 1 561 1.3E-193 T 11-11-2016 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS13215 055eda3d1b12c52d8e18dcefa3d5464d 213 Gene3D G3DSA:3.30.1150.10 130 213 1.1E-11 T 11-11-2016 SHALO_RS13215 055eda3d1b12c52d8e18dcefa3d5464d 213 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 142 213 1.8E-11 T 11-11-2016 IPR006260 TonB, C-terminal GO:0006810 SHALO_RS13215 055eda3d1b12c52d8e18dcefa3d5464d 213 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 140 212 7.3E-16 T 11-11-2016 IPR006260 TonB, C-terminal GO:0006810 SHALO_RS13215 055eda3d1b12c52d8e18dcefa3d5464d 213 SUPERFAMILY SSF74653 107 213 7.85E-15 T 11-11-2016 SHALO_RS01115 40b04f40c79429c0faebc477745529b7 317 Pfam PF16199 Radical_SAM C-terminal domain 229 311 6.5E-18 T 11-11-2016 IPR032432 Radical SAM, C-terminal extension Reactome: R-HSA-3214847 SHALO_RS01115 40b04f40c79429c0faebc477745529b7 317 SMART SM00729 21 267 1.2E-34 T 11-11-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 SHALO_RS01115 40b04f40c79429c0faebc477745529b7 317 SUPERFAMILY SSF102114 9 274 4.19E-44 T 11-11-2016 SHALO_RS01115 40b04f40c79429c0faebc477745529b7 317 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 7 314 5.1E-89 T 11-11-2016 IPR005911 Protein YhcC-like GO:0051536 SHALO_RS01115 40b04f40c79429c0faebc477745529b7 317 Gene3D G3DSA:3.80.30.20 20 261 1.1E-25 T 11-11-2016 IPR023404 Radical SAM, alpha/beta horseshoe SHALO_RS01115 40b04f40c79429c0faebc477745529b7 317 Pfam PF04055 Radical SAM superfamily 41 222 2.4E-10 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SHALO_RS04820 4abac20bab4b35e9b86d97f06bd1f0fa 525 Pfam PF03929 PepSY-associated TM region 15 372 7.6E-28 T 11-11-2016 IPR005625 PepSY-associated TM protein SHALO_RS03000 531ffde35dad5fce4d639e9a2d11e0f8 225 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 3 224 36.161 T 11-11-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 SHALO_RS03000 531ffde35dad5fce4d639e9a2d11e0f8 225 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 169 186 - T 11-11-2016 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 SHALO_RS03000 531ffde35dad5fce4d639e9a2d11e0f8 225 Gene3D G3DSA:3.40.1180.10 6 224 1.3E-82 T 11-11-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 SHALO_RS03000 531ffde35dad5fce4d639e9a2d11e0f8 225 SUPERFAMILY SSF64005 6 217 1.31E-75 T 11-11-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 SHALO_RS03000 531ffde35dad5fce4d639e9a2d11e0f8 225 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 6 223 1.8E-80 T 11-11-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 SHALO_RS03000 531ffde35dad5fce4d639e9a2d11e0f8 225 Pfam PF01255 Putative undecaprenyl diphosphate synthase 10 223 7.9E-76 T 11-11-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 SHALO_RS02715 440fb56918d72d80b33fa9473413ebdb 96 SUPERFAMILY SSF143011 1 83 1.7E-20 T 11-11-2016 SHALO_RS02715 440fb56918d72d80b33fa9473413ebdb 96 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 5 83 1.5E-12 T 11-11-2016 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family SHALO_RS02715 440fb56918d72d80b33fa9473413ebdb 96 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 4 83 2.1E-10 T 11-11-2016 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family SHALO_RS09275 6ccd1f9680c03f41042859c51aa3c16e 358 SUPERFAMILY SSF54631 184 317 9.43E-24 T 11-11-2016 SHALO_RS09275 6ccd1f9680c03f41042859c51aa3c16e 358 Pfam PF01595 Domain of unknown function DUF21 10 180 6.7E-27 T 11-11-2016 IPR002550 Domain of unknown function DUF21 SHALO_RS09275 6ccd1f9680c03f41042859c51aa3c16e 358 Gene3D G3DSA:3.10.580.10 183 316 9.1E-15 T 11-11-2016 SHALO_RS09275 6ccd1f9680c03f41042859c51aa3c16e 358 Pfam PF00571 CBS domain 196 245 0.003 T 11-11-2016 IPR000644 CBS domain SHALO_RS09275 6ccd1f9680c03f41042859c51aa3c16e 358 Pfam PF00571 CBS domain 266 316 1.3E-5 T 11-11-2016 IPR000644 CBS domain SHALO_RS08165 2cf4449fc932921fdc9e311e54ebf399 386 SUPERFAMILY SSF63882 12 163 2.09E-40 T 11-11-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 SHALO_RS08165 2cf4449fc932921fdc9e311e54ebf399 386 SUPERFAMILY SSF63867 316 386 6.28E-7 T 11-11-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 SHALO_RS08165 2cf4449fc932921fdc9e311e54ebf399 386 SMART SM00852 167 304 1.2E-30 T 11-11-2016 IPR001453 MoaB/Mog domain SHALO_RS08165 2cf4449fc932921fdc9e311e54ebf399 386 Gene3D G3DSA:3.90.105.10 118 149 1.0E-13 T 11-11-2016 SHALO_RS08165 2cf4449fc932921fdc9e311e54ebf399 386 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 239 273 - T 11-11-2016 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 SHALO_RS08165 2cf4449fc932921fdc9e311e54ebf399 386 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 163 293 4.8E-25 T 11-11-2016 IPR001453 MoaB/Mog domain SHALO_RS08165 2cf4449fc932921fdc9e311e54ebf399 386 Pfam PF00994 Probable molybdopterin binding domain 167 303 3.7E-20 T 11-11-2016 IPR001453 MoaB/Mog domain SHALO_RS08165 2cf4449fc932921fdc9e311e54ebf399 386 Gene3D G3DSA:2.170.190.11 38 117 7.9E-18 T 11-11-2016 SHALO_RS08165 2cf4449fc932921fdc9e311e54ebf399 386 Gene3D G3DSA:3.40.980.10 150 312 2.0E-51 T 11-11-2016 IPR001453 MoaB/Mog domain SHALO_RS08165 2cf4449fc932921fdc9e311e54ebf399 386 SUPERFAMILY SSF53218 165 309 1.3E-34 T 11-11-2016 IPR001453 MoaB/Mog domain SHALO_RS08165 2cf4449fc932921fdc9e311e54ebf399 386 Pfam PF03453 MoeA N-terminal region (domain I and II) 6 154 8.4E-26 T 11-11-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 SHALO_RS04610 3e374db8c09cc4840e0f4d70afc46f0d 137 SMART SM00857 2 91 0.0074 T 11-11-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 SHALO_RS04610 3e374db8c09cc4840e0f4d70afc46f0d 137 Gene3D G3DSA:1.10.10.60 93 137 1.9E-17 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 SHALO_RS04610 3e374db8c09cc4840e0f4d70afc46f0d 137 Pfam PF02796 Helix-turn-helix domain of resolvase 93 135 6.8E-6 T 11-11-2016 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 SHALO_RS04610 3e374db8c09cc4840e0f4d70afc46f0d 137 SUPERFAMILY SSF53041 17 90 1.31E-15 T 11-11-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 SHALO_RS04610 3e374db8c09cc4840e0f4d70afc46f0d 137 SUPERFAMILY SSF46689 93 136 6.57E-10 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 SHALO_RS04610 3e374db8c09cc4840e0f4d70afc46f0d 137 Pfam PF00239 Resolvase, N terminal domain 17 90 1.7E-15 T 11-11-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 SHALO_RS04610 3e374db8c09cc4840e0f4d70afc46f0d 137 Gene3D G3DSA:1.20.5.40 51 90 2.5E-18 T 11-11-2016 SHALO_RS05985 c0a01960da1c2db091093d7a90143a0c 130 Pfam PF13899 Thioredoxin-like 23 99 3.0E-14 T 11-11-2016 SHALO_RS05985 c0a01960da1c2db091093d7a90143a0c 130 SUPERFAMILY SSF52833 23 125 2.76E-22 T 11-11-2016 IPR012336 Thioredoxin-like fold SHALO_RS05985 c0a01960da1c2db091093d7a90143a0c 130 Gene3D G3DSA:3.40.30.10 23 126 3.3E-18 T 11-11-2016 IPR012336 Thioredoxin-like fold SHALO_RS07530 38c03dd008dea537feeea7699014268f 501 Pfam PF13486 Reductive dehalogenase subunit 65 352 2.4E-32 T 11-11-2016 IPR028894 Reductive dehalogenase domain SHALO_RS07530 38c03dd008dea537feeea7699014268f 501 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 366 377 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_RS07530 38c03dd008dea537feeea7699014268f 501 TIGRFAM TIGR02486 RDH: reductive dehalogenase 177 464 4.3E-96 T 11-11-2016 IPR012832 Reductive dehalogenase SHALO_RS07530 38c03dd008dea537feeea7699014268f 501 Gene3D G3DSA:3.30.70.20 364 429 1.7E-8 T 11-11-2016 SHALO_RS07530 38c03dd008dea537feeea7699014268f 501 Pfam PF13484 4Fe-4S double cluster binding domain 365 429 5.7E-10 T 11-11-2016 SHALO_RS07530 38c03dd008dea537feeea7699014268f 501 SUPERFAMILY SSF54862 355 430 1.05E-9 T 11-11-2016 SHALO_RS06400 be8d61a3cd32bbb91c608eedb0662ba4 517 TIGRFAM TIGR01286 nifK: nitrogenase molybdenum-iron protein beta chain 2 517 9.5E-228 T 11-11-2016 IPR005976 Nitrogenase molybdenum-iron protein beta chain GO:0009399|GO:0016163|GO:0016612|GO:0055114 KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 SHALO_RS06400 be8d61a3cd32bbb91c608eedb0662ba4 517 Gene3D G3DSA:3.40.50.1980 220 319 4.8E-24 T 11-11-2016 SHALO_RS06400 be8d61a3cd32bbb91c608eedb0662ba4 517 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 71 495 6.9E-118 T 11-11-2016 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 SHALO_RS06400 be8d61a3cd32bbb91c608eedb0662ba4 517 ProSitePatterns PS00090 Nitrogenases component 1 alpha and beta subunits signature 2. 152 166 - T 11-11-2016 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 SHALO_RS06400 be8d61a3cd32bbb91c608eedb0662ba4 517 SUPERFAMILY SSF53807 4 516 1.31E-149 T 11-11-2016 SHALO_RS06400 be8d61a3cd32bbb91c608eedb0662ba4 517 Gene3D G3DSA:3.40.50.1980 347 471 2.5E-50 T 11-11-2016 SHALO_RS06400 be8d61a3cd32bbb91c608eedb0662ba4 517 Gene3D G3DSA:3.40.50.1980 71 210 6.7E-50 T 11-11-2016 SHALO_RS06400 be8d61a3cd32bbb91c608eedb0662ba4 517 Pfam PF11844 Domain of unknown function (DUF3364) 2 57 1.5E-21 T 11-11-2016 IPR024564 Nitrogenase molybdenum-iron protein beta chain, N-terminal KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 SHALO_RS04255 d2db7d402eacf27a5abc41d6fd0100e3 223 Pfam PF00005 ABC transporter 22 168 4.3E-30 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_RS04255 d2db7d402eacf27a5abc41d6fd0100e3 223 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHALO_RS04255 d2db7d402eacf27a5abc41d6fd0100e3 223 Gene3D G3DSA:3.40.50.300 2 219 3.9E-58 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS04255 d2db7d402eacf27a5abc41d6fd0100e3 223 SUPERFAMILY SSF52540 4 222 6.25E-61 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS04255 d2db7d402eacf27a5abc41d6fd0100e3 223 SMART SM00382 30 217 1.2E-9 T 11-11-2016 IPR003593 AAA+ ATPase domain SHALO_RS09565 150931fb2b289c270136c44cd29d95d3 371 Gene3D G3DSA:3.40.718.10 9 365 2.7E-128 T 11-11-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 SHALO_RS09565 150931fb2b289c270136c44cd29d95d3 371 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 255 274 - T 11-11-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 SHALO_RS09565 150931fb2b289c270136c44cd29d95d3 371 SMART SM01329 20 364 9.1E-198 T 11-11-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 SHALO_RS09565 150931fb2b289c270136c44cd29d95d3 371 SUPERFAMILY SSF53659 19 366 1.22E-123 T 11-11-2016 SHALO_RS09565 150931fb2b289c270136c44cd29d95d3 371 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 20 362 1.2E-134 T 11-11-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 SHALO_RS09565 150931fb2b289c270136c44cd29d95d3 371 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 19 368 50.674 T 11-11-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 SHALO_RS09565 150931fb2b289c270136c44cd29d95d3 371 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 20 356 2.5E-155 T 11-11-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 SHALO_RS13740 3c637d3972cdc6180c4d188ba0b79a9c 445 Gene3D G3DSA:3.90.1300.10 2 442 1.7E-110 T 11-11-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SHALO_RS13740 3c637d3972cdc6180c4d188ba0b79a9c 445 Pfam PF01425 Amidase 49 431 5.3E-87 T 11-11-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SHALO_RS13740 3c637d3972cdc6180c4d188ba0b79a9c 445 SUPERFAMILY SSF75304 2 439 4.84E-113 T 11-11-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SHALO_RS13740 3c637d3972cdc6180c4d188ba0b79a9c 445 TIGRFAM TIGR02713 allophanate_hyd: allophanate hydrolase 35 440 3.7E-178 T 11-11-2016 IPR014085 Allophanate hydrolase KEGG: 00220+3.5.1.54|KEGG: 00791+3.5.1.54|MetaCyc: PWY-5169|MetaCyc: PWY-5703 SHALO_RS08445 12d0a3e85bbe5262763c837c4ac9bc32 567 SUPERFAMILY SSF55826 218 370 4.58E-20 T 11-11-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 SHALO_RS08445 12d0a3e85bbe5262763c837c4ac9bc32 567 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 455 4.3E-50 T 11-11-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 SHALO_RS08445 12d0a3e85bbe5262763c837c4ac9bc32 567 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 567 37.219 T 11-11-2016 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 SHALO_RS08445 12d0a3e85bbe5262763c837c4ac9bc32 567 Pfam PF04073 Aminoacyl-tRNA editing domain 257 370 1.9E-20 T 11-11-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 SHALO_RS08445 12d0a3e85bbe5262763c837c4ac9bc32 567 Gene3D G3DSA:3.30.930.10 387 470 1.2E-96 T 11-11-2016 SHALO_RS08445 12d0a3e85bbe5262763c837c4ac9bc32 567 Gene3D G3DSA:3.30.930.10 12 234 1.2E-96 T 11-11-2016 SHALO_RS08445 12d0a3e85bbe5262763c837c4ac9bc32 567 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 4.6E-16 T 11-11-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 SHALO_RS08445 12d0a3e85bbe5262763c837c4ac9bc32 567 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 4.6E-16 T 11-11-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 SHALO_RS08445 12d0a3e85bbe5262763c837c4ac9bc32 567 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 4.6E-16 T 11-11-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 SHALO_RS08445 12d0a3e85bbe5262763c837c4ac9bc32 567 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 4.6E-16 T 11-11-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 SHALO_RS08445 12d0a3e85bbe5262763c837c4ac9bc32 567 Gene3D G3DSA:3.90.960.10 257 370 8.4E-20 T 11-11-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 SHALO_RS08445 12d0a3e85bbe5262763c837c4ac9bc32 567 Pfam PF03129 Anticodon binding domain 476 564 2.1E-16 T 11-11-2016 IPR004154 Anticodon-binding SHALO_RS08445 12d0a3e85bbe5262763c837c4ac9bc32 567 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 562 5.1E-218 T 11-11-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 SHALO_RS08445 12d0a3e85bbe5262763c837c4ac9bc32 567 SUPERFAMILY SSF52954 461 566 1.66E-24 T 11-11-2016 IPR004154 Anticodon-binding SHALO_RS08445 12d0a3e85bbe5262763c837c4ac9bc32 567 Gene3D G3DSA:3.40.50.800 471 566 5.0E-22 T 11-11-2016 IPR004154 Anticodon-binding SHALO_RS08445 12d0a3e85bbe5262763c837c4ac9bc32 567 SUPERFAMILY SSF55681 10 237 8.23E-92 T 11-11-2016 SHALO_RS08445 12d0a3e85bbe5262763c837c4ac9bc32 567 SUPERFAMILY SSF55681 405 472 8.23E-92 T 11-11-2016 SHALO_RS14960 f362c0f700704e430b6b6aeb10d793a2 342 SMART SM00450 26 145 7.3E-7 T 11-11-2016 IPR001763 Rhodanese-like domain SHALO_RS14960 f362c0f700704e430b6b6aeb10d793a2 342 SMART SM00450 215 338 9.3E-16 T 11-11-2016 IPR001763 Rhodanese-like domain SHALO_RS14960 f362c0f700704e430b6b6aeb10d793a2 342 SUPERFAMILY SSF52821 215 340 1.7E-28 T 11-11-2016 IPR001763 Rhodanese-like domain SHALO_RS14960 f362c0f700704e430b6b6aeb10d793a2 342 SUPERFAMILY SSF52821 22 138 5.76E-16 T 11-11-2016 IPR001763 Rhodanese-like domain SHALO_RS14960 f362c0f700704e430b6b6aeb10d793a2 342 Pfam PF00581 Rhodanese-like domain 218 334 1.4E-15 T 11-11-2016 IPR001763 Rhodanese-like domain SHALO_RS14960 f362c0f700704e430b6b6aeb10d793a2 342 Pfam PF00581 Rhodanese-like domain 28 137 1.5E-11 T 11-11-2016 IPR001763 Rhodanese-like domain SHALO_RS14960 f362c0f700704e430b6b6aeb10d793a2 342 Gene3D G3DSA:3.40.250.10 214 340 6.5E-31 T 11-11-2016 IPR001763 Rhodanese-like domain SHALO_RS14960 f362c0f700704e430b6b6aeb10d793a2 342 Gene3D G3DSA:3.40.250.10 22 142 6.6E-17 T 11-11-2016 IPR001763 Rhodanese-like domain SHALO_RS13505 735631a0bb1067439afa3c7d20b521a6 445 SUPERFAMILY SSF53383 69 428 2.55E-35 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase SHALO_RS13505 735631a0bb1067439afa3c7d20b521a6 445 Pfam PF03841 L-seryl-tRNA selenium transferase 74 427 2.2E-130 T 11-11-2016 IPR018319 L-seryl-tRNA selenium transferase-like KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 SHALO_RS13505 735631a0bb1067439afa3c7d20b521a6 445 Hamap MF_00423 L-seryl-tRNA(Sec) selenium transferase [selA]. 1 445 170.849 T 11-11-2016 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 SHALO_RS13505 735631a0bb1067439afa3c7d20b521a6 445 TIGRFAM TIGR00474 selA: L-seryl-tRNA(Sec) selenium transferase 4 440 1.9E-156 T 11-11-2016 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 SHALO_RS13505 735631a0bb1067439afa3c7d20b521a6 445 Gene3D G3DSA:3.40.640.10 74 312 1.7E-20 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SHALO_RS02700 65f0486cfb8ab9575f47a7c39d6d6377 311 SUPERFAMILY SSF52467 17 41 1.05E-5 T 11-11-2016 IPR029035 DHS-like NAD/FAD-binding domain SHALO_RS02700 65f0486cfb8ab9575f47a7c39d6d6377 311 SUPERFAMILY SSF52467 73 217 1.05E-5 T 11-11-2016 IPR029035 DHS-like NAD/FAD-binding domain SHALO_RS02700 65f0486cfb8ab9575f47a7c39d6d6377 311 Pfam PF13289 SIR2-like domain 134 234 2.2E-13 T 11-11-2016 SHALO_RS10825 2fa51c45dada68f24e0922a93f884f96 204 Gene3D G3DSA:3.30.230.30 2 123 3.3E-34 T 11-11-2016 IPR001498 Impact, N-terminal SHALO_RS10825 2fa51c45dada68f24e0922a93f884f96 204 ProSitePatterns PS00910 Uncharacterized protein family UPF0029 signature. 74 103 - T 11-11-2016 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site SHALO_RS10825 2fa51c45dada68f24e0922a93f884f96 204 SUPERFAMILY SSF54211 2 123 2.05E-33 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SHALO_RS10825 2fa51c45dada68f24e0922a93f884f96 204 Pfam PF01205 Uncharacterized protein family UPF0029 15 119 3.6E-20 T 11-11-2016 IPR001498 Impact, N-terminal SHALO_RS04250 55513c1cfcf7e3d64e39738fd4943f98 392 Gene3D G3DSA:3.40.50.150 122 229 7.7E-12 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS04250 55513c1cfcf7e3d64e39738fd4943f98 392 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 107 281 7.9E-42 T 11-11-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 SHALO_RS04250 55513c1cfcf7e3d64e39738fd4943f98 392 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 58 287 24.9 T 11-11-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 SHALO_RS04250 55513c1cfcf7e3d64e39738fd4943f98 392 SUPERFAMILY SSF53335 107 283 4.78E-22 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS04250 55513c1cfcf7e3d64e39738fd4943f98 392 Pfam PF02390 Putative methyltransferase 121 281 6.2E-39 T 11-11-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 SHALO_RS09680 4f5d32328315a9471e73f195871afe09 167 SUPERFAMILY SSF54637 10 137 1.92E-32 T 11-11-2016 IPR029069 HotDog domain SHALO_RS09680 4f5d32328315a9471e73f195871afe09 167 Gene3D G3DSA:3.10.129.10 10 140 2.2E-36 T 11-11-2016 IPR029069 HotDog domain SHALO_RS09680 4f5d32328315a9471e73f195871afe09 167 Pfam PF03061 Thioesterase superfamily 53 121 2.8E-10 T 11-11-2016 IPR006683 Thioesterase domain Reactome: R-HSA-75105 SHALO_RS05965 b7fe3aa623cdb9bf6080c9f45baa5579 400 ProSitePatterns PS01007 Transposases, Mutator family, signature. 228 252 - T 11-11-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 SHALO_RS05965 b7fe3aa623cdb9bf6080c9f45baa5579 400 Pfam PF00872 Transposase, Mutator family 11 373 2.6E-102 T 11-11-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 SHALO_RS10600 30035bd2c84bb61c08b54b2288aa36a1 841 SUPERFAMILY SSF109604 423 595 3.35E-11 T 11-11-2016 SHALO_RS10600 30035bd2c84bb61c08b54b2288aa36a1 841 Gene3D G3DSA:1.10.3210.10 484 608 2.6E-11 T 11-11-2016 IPR006674 HD domain SHALO_RS10600 30035bd2c84bb61c08b54b2288aa36a1 841 Pfam PF08335 GlnD PII-uridylyltransferase 197 321 1.2E-18 T 11-11-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 SHALO_RS10600 30035bd2c84bb61c08b54b2288aa36a1 841 SUPERFAMILY SSF81301 61 185 4.16E-16 T 11-11-2016 SHALO_RS10600 30035bd2c84bb61c08b54b2288aa36a1 841 Gene3D G3DSA:3.30.460.10 88 174 4.1E-5 T 11-11-2016 SHALO_RS10600 30035bd2c84bb61c08b54b2288aa36a1 841 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 841 73.62 T 11-11-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 SHALO_RS10600 30035bd2c84bb61c08b54b2288aa36a1 841 Pfam PF01966 HD domain 457 566 6.7E-9 T 11-11-2016 IPR006674 HD domain SHALO_RS08080 20e3582eacea8bcb1df10c284ab2d18e 398 Gene3D G3DSA:3.50.50.60 111 285 1.8E-46 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHALO_RS08080 20e3582eacea8bcb1df10c284ab2d18e 398 SUPERFAMILY SSF46548 7 119 1.83E-21 T 11-11-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 SHALO_RS08080 20e3582eacea8bcb1df10c284ab2d18e 398 Gene3D G3DSA:3.50.50.60 286 394 1.2E-14 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHALO_RS08080 20e3582eacea8bcb1df10c284ab2d18e 398 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 6 96 1.1E-25 T 11-11-2016 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 SHALO_RS08080 20e3582eacea8bcb1df10c284ab2d18e 398 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 234 258 2.9E-13 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SHALO_RS08080 20e3582eacea8bcb1df10c284ab2d18e 398 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 359 377 2.9E-13 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SHALO_RS08080 20e3582eacea8bcb1df10c284ab2d18e 398 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 110 132 2.9E-13 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SHALO_RS08080 20e3582eacea8bcb1df10c284ab2d18e 398 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 323 344 2.9E-13 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SHALO_RS08080 20e3582eacea8bcb1df10c284ab2d18e 398 SUPERFAMILY SSF51971 107 328 2.35E-56 T 11-11-2016 SHALO_RS08080 20e3582eacea8bcb1df10c284ab2d18e 398 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 109 381 8.5E-30 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHALO_RS08080 20e3582eacea8bcb1df10c284ab2d18e 398 Gene3D G3DSA:1.10.1060.10 5 110 8.2E-28 T 11-11-2016 SHALO_RS08080 20e3582eacea8bcb1df10c284ab2d18e 398 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 111 130 5.3E-20 T 11-11-2016 SHALO_RS08080 20e3582eacea8bcb1df10c284ab2d18e 398 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 238 256 5.3E-20 T 11-11-2016 SHALO_RS08080 20e3582eacea8bcb1df10c284ab2d18e 398 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 321 337 5.3E-20 T 11-11-2016 SHALO_RS08080 20e3582eacea8bcb1df10c284ab2d18e 398 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 349 371 5.3E-20 T 11-11-2016 SHALO_RS07930 fdf4ef0324e5c656e8538aafff603ffb 454 Pfam PF01474 Class-II DAHP synthetase family 4 441 5.3E-206 T 11-11-2016 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 SHALO_RS07930 fdf4ef0324e5c656e8538aafff603ffb 454 SUPERFAMILY SSF51569 3 445 8.79E-201 T 11-11-2016 SHALO_RS07930 fdf4ef0324e5c656e8538aafff603ffb 454 TIGRFAM TIGR01358 DAHP_synth_II: 3-deoxy-7-phosphoheptulonate synthase 4 447 3.5E-215 T 11-11-2016 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 SHALO_RS06610 2a16b20b96cd011a94e188d15f68aa82 545 SUPERFAMILY SSF56425 224 328 6.28E-36 T 11-11-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_RS06610 2a16b20b96cd011a94e188d15f68aa82 545 Gene3D G3DSA:3.90.700.10 230 324 2.5E-31 T 11-11-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_RS06610 2a16b20b96cd011a94e188d15f68aa82 545 PIRSF PIRSF000171 1 533 1.6E-39 T 11-11-2016 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_RS06610 2a16b20b96cd011a94e188d15f68aa82 545 Gene3D G3DSA:3.50.50.60 2 229 5.9E-91 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHALO_RS06610 2a16b20b96cd011a94e188d15f68aa82 545 Gene3D G3DSA:3.50.50.60 325 387 5.9E-91 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHALO_RS06610 2a16b20b96cd011a94e188d15f68aa82 545 Pfam PF02910 Fumarate reductase flavoprotein C-term 424 507 1.7E-22 T 11-11-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_RS06610 2a16b20b96cd011a94e188d15f68aa82 545 Gene3D G3DSA:1.20.58.100 400 506 5.9E-26 T 11-11-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_RS06610 2a16b20b96cd011a94e188d15f68aa82 545 SUPERFAMILY SSF51905 331 401 4.92E-59 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHALO_RS06610 2a16b20b96cd011a94e188d15f68aa82 545 SUPERFAMILY SSF51905 2 247 4.92E-59 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHALO_RS06610 2a16b20b96cd011a94e188d15f68aa82 545 SUPERFAMILY SSF46977 415 536 7.46E-29 T 11-11-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_RS06610 2a16b20b96cd011a94e188d15f68aa82 545 Pfam PF00890 FAD binding domain 4 367 1.1E-86 T 11-11-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_RS12130 16e9ef8b2acfe049cad279e261407cbe 252 Hamap MF_01974 Methionine aminopeptidase [map]. 3 252 34.686 T 11-11-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 SHALO_RS12130 16e9ef8b2acfe049cad279e261407cbe 252 Pfam PF00557 Metallopeptidase family M24 13 241 2.9E-45 T 11-11-2016 IPR000994 Peptidase M24, structural domain SHALO_RS12130 16e9ef8b2acfe049cad279e261407cbe 252 SUPERFAMILY SSF55920 3 251 6.28E-73 T 11-11-2016 IPR000994 Peptidase M24, structural domain SHALO_RS12130 16e9ef8b2acfe049cad279e261407cbe 252 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 166 184 - T 11-11-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 SHALO_RS12130 16e9ef8b2acfe049cad279e261407cbe 252 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 3 250 2.1E-91 T 11-11-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 SHALO_RS12130 16e9ef8b2acfe049cad279e261407cbe 252 PRINTS PR00599 Methionine aminopeptidase-1 signature 68 81 5.7E-21 T 11-11-2016 IPR001714 Peptidase M24, methionine aminopeptidase SHALO_RS12130 16e9ef8b2acfe049cad279e261407cbe 252 PRINTS PR00599 Methionine aminopeptidase-1 signature 90 106 5.7E-21 T 11-11-2016 IPR001714 Peptidase M24, methionine aminopeptidase SHALO_RS12130 16e9ef8b2acfe049cad279e261407cbe 252 PRINTS PR00599 Methionine aminopeptidase-1 signature 160 172 5.7E-21 T 11-11-2016 IPR001714 Peptidase M24, methionine aminopeptidase SHALO_RS12130 16e9ef8b2acfe049cad279e261407cbe 252 PRINTS PR00599 Methionine aminopeptidase-1 signature 194 206 5.7E-21 T 11-11-2016 IPR001714 Peptidase M24, methionine aminopeptidase SHALO_RS12130 16e9ef8b2acfe049cad279e261407cbe 252 Gene3D G3DSA:3.90.230.10 3 250 7.5E-74 T 11-11-2016 IPR000994 Peptidase M24, structural domain SHALO_RS06460 8aaa0b28c90c4089d7f01f5545187270 521 SUPERFAMILY SSF55729 10 144 2.23E-16 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase SHALO_RS06460 8aaa0b28c90c4089d7f01f5545187270 521 Pfam PF00583 Acetyltransferase (GNAT) family 60 144 4.7E-5 T 11-11-2016 IPR000182 GNAT domain GO:0008080 SHALO_RS06460 8aaa0b28c90c4089d7f01f5545187270 521 Gene3D G3DSA:3.40.630.30 14 147 2.3E-17 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase SHALO_RS06460 8aaa0b28c90c4089d7f01f5545187270 521 Pfam PF00795 Carbon-nitrogen hydrolase 228 489 8.4E-36 T 11-11-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 SHALO_RS06460 8aaa0b28c90c4089d7f01f5545187270 521 Gene3D G3DSA:3.60.110.10 222 509 2.6E-60 T 11-11-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 SHALO_RS06460 8aaa0b28c90c4089d7f01f5545187270 521 SUPERFAMILY SSF56317 225 496 3.01E-60 T 11-11-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 SHALO_RS13570 4f534027bd8ed1a0c9d4eb3cbac4706f 239 Pfam PF13098 Thioredoxin-like domain 124 200 9.2E-7 T 11-11-2016 IPR012336 Thioredoxin-like fold SHALO_RS13570 4f534027bd8ed1a0c9d4eb3cbac4706f 239 SUPERFAMILY SSF52833 103 232 6.8E-17 T 11-11-2016 IPR012336 Thioredoxin-like fold SHALO_RS13570 4f534027bd8ed1a0c9d4eb3cbac4706f 239 Gene3D G3DSA:3.40.30.10 117 233 1.1E-10 T 11-11-2016 IPR012336 Thioredoxin-like fold SHALO_RS01350 93a81db48626b8925407121bf9c5383f 139 Gene3D G3DSA:1.10.10.10 2 80 5.1E-24 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS01350 93a81db48626b8925407121bf9c5383f 139 Pfam PF01475 Ferric uptake regulator family 11 125 7.9E-28 T 11-11-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 SHALO_RS01350 93a81db48626b8925407121bf9c5383f 139 SUPERFAMILY SSF46785 3 122 8.33E-29 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS13160 c373f9674113a46a2d9d4273350094f2 689 Hamap MF_02023 Dissimilatory sulfite reductase. 2 688 50.647 T 11-11-2016 IPR032897 Dissimilatory sulfite reductase GO:0016002|GO:0020037|GO:0070814 SHALO_RS13160 c373f9674113a46a2d9d4273350094f2 689 SUPERFAMILY SSF48695 298 519 2.6E-48 T 11-11-2016 IPR011031 Multihaem cytochrome SHALO_RS13160 c373f9674113a46a2d9d4273350094f2 689 SUPERFAMILY SSF48695 553 685 2.6E-48 T 11-11-2016 IPR011031 Multihaem cytochrome SHALO_RS13160 c373f9674113a46a2d9d4273350094f2 689 SUPERFAMILY SSF48695 135 242 2.6E-48 T 11-11-2016 IPR011031 Multihaem cytochrome SHALO_RS13160 c373f9674113a46a2d9d4273350094f2 689 Gene3D G3DSA:1.10.710.10 289 346 2.0E-13 T 11-11-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 SHALO_RS13160 c373f9674113a46a2d9d4273350094f2 689 Gene3D G3DSA:1.10.710.10 401 494 1.4E-10 T 11-11-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 SHALO_RS13160 c373f9674113a46a2d9d4273350094f2 689 Gene3D G3DSA:1.10.710.10 357 367 1.4E-10 T 11-11-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 SHALO_RS13160 c373f9674113a46a2d9d4273350094f2 689 Gene3D G3DSA:1.10.710.10 134 178 2.0E-13 T 11-11-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 SHALO_RS12770 dc860ba716da3529a160facbeaa32ab9 263 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 251 3.6E-16 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHALO_RS12770 dc860ba716da3529a160facbeaa32ab9 263 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 15 262 4.4E-83 T 11-11-2016 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 SHALO_RS12770 dc860ba716da3529a160facbeaa32ab9 263 Gene3D G3DSA:1.10.3720.10 66 262 1.8E-32 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHALO_RS12770 dc860ba716da3529a160facbeaa32ab9 263 SUPERFAMILY SSF161098 66 252 9.29E-34 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHALO_RS07955 b1737936fb4e28da7ab07a0abf160217 411 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 1 410 39.493 T 11-11-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 SHALO_RS07955 b1737936fb4e28da7ab07a0abf160217 411 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 317 338 - T 11-11-2016 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 SHALO_RS07955 b1737936fb4e28da7ab07a0abf160217 411 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 8 400 3.8E-151 T 11-11-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 SHALO_RS07955 b1737936fb4e28da7ab07a0abf160217 411 SUPERFAMILY SSF53720 2 410 5.5E-115 T 11-11-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 SHALO_RS07955 b1737936fb4e28da7ab07a0abf160217 411 Gene3D G3DSA:3.40.605.10 369 410 3.5E-103 T 11-11-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 SHALO_RS07955 b1737936fb4e28da7ab07a0abf160217 411 Gene3D G3DSA:3.40.605.10 1 219 3.5E-103 T 11-11-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 SHALO_RS07955 b1737936fb4e28da7ab07a0abf160217 411 PIRSF PIRSF000151 1 411 5.5E-175 T 11-11-2016 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 SHALO_RS07955 b1737936fb4e28da7ab07a0abf160217 411 Gene3D G3DSA:3.40.309.10 222 368 5.1E-42 T 11-11-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 SHALO_RS07955 b1737936fb4e28da7ab07a0abf160217 411 Pfam PF00171 Aldehyde dehydrogenase family 2 278 3.4E-18 T 11-11-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 SHALO_RS13605 85221126a183ee1782c06fe378292aa6 235 SUPERFAMILY SSF53448 8 229 9.64E-24 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases SHALO_RS13605 85221126a183ee1782c06fe378292aa6 235 Gene3D G3DSA:3.90.550.10 8 135 5.1E-12 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases SHALO_RS13605 85221126a183ee1782c06fe378292aa6 235 Pfam PF00535 Glycosyl transferase family 2 8 129 3.8E-16 T 11-11-2016 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 SHALO_RS14760 a444040194838180b5155df126f418b7 333 SUPERFAMILY SSF53067 97 307 9.93E-30 T 11-11-2016 SHALO_RS14760 a444040194838180b5155df126f418b7 333 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 72 92 1.1E-37 T 11-11-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SHALO_RS14760 a444040194838180b5155df126f418b7 333 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 149 170 1.1E-37 T 11-11-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SHALO_RS14760 a444040194838180b5155df126f418b7 333 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 93 112 1.1E-37 T 11-11-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SHALO_RS14760 a444040194838180b5155df126f418b7 333 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 3 16 1.1E-37 T 11-11-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SHALO_RS14760 a444040194838180b5155df126f418b7 333 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 126 138 1.1E-37 T 11-11-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SHALO_RS14760 a444040194838180b5155df126f418b7 333 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 261 270 1.1E-37 T 11-11-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SHALO_RS14760 a444040194838180b5155df126f418b7 333 ProSitePatterns PS01016 Glycoprotease family signature. 92 112 - T 11-11-2016 IPR017860 Peptidase M22, conserved site KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618|Reactome: R-HSA-6782315 SHALO_RS14760 a444040194838180b5155df126f418b7 333 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 332 53.847 T 11-11-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SHALO_RS14760 a444040194838180b5155df126f418b7 333 Gene3D G3DSA:3.30.420.40 2 152 9.4E-28 T 11-11-2016 SHALO_RS14760 a444040194838180b5155df126f418b7 333 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 3 304 1.3E-101 T 11-11-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SHALO_RS14760 a444040194838180b5155df126f418b7 333 SUPERFAMILY SSF53067 1 117 9.71E-20 T 11-11-2016 SHALO_RS14760 a444040194838180b5155df126f418b7 333 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 2 311 3.5E-108 T 11-11-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SHALO_RS14760 a444040194838180b5155df126f418b7 333 Pfam PF00814 Glycoprotease family 24 304 6.7E-78 T 11-11-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SHALO_RS06550 cef1ec4b9265af2a4da313786e04d6b2 259 Gene3D G3DSA:3.40.50.1010 3 146 1.3E-31 T 11-11-2016 IPR029060 PIN domain-like SHALO_RS06550 cef1ec4b9265af2a4da313786e04d6b2 259 Pfam PF12872 OST-HTH/LOTUS domain 169 237 2.1E-13 T 11-11-2016 IPR025605 OST-HTH/LOTUS domain SHALO_RS06550 cef1ec4b9265af2a4da313786e04d6b2 259 Pfam PF01936 NYN domain 9 142 3.9E-31 T 11-11-2016 IPR021139 NYN domain, limkain-b1-type SHALO_RS04770 9e85a0b3a938226f27997c425a63bc10 929 TIGRFAM TIGR01706 NAPA: periplasmic nitrate reductase, large subunit 3 929 0.0 T 11-11-2016 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042128|GO:0042597|GO:0051539|GO:0055114 KEGG: 00910+1.7.99.4 SHALO_RS04770 9e85a0b3a938226f27997c425a63bc10 929 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 45 62 - T 11-11-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 SHALO_RS04770 9e85a0b3a938226f27997c425a63bc10 929 SUPERFAMILY SSF50692 794 929 1.35E-38 T 11-11-2016 IPR009010 Aspartate decarboxylase-like domain SHALO_RS04770 9e85a0b3a938226f27997c425a63bc10 929 Pfam PF01568 Molydopterin dinucleotide binding domain 816 923 1.2E-22 T 11-11-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 SHALO_RS04770 9e85a0b3a938226f27997c425a63bc10 929 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 3 22 1.8E-7 T 11-11-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal SHALO_RS04770 9e85a0b3a938226f27997c425a63bc10 929 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 26 1.6E-6 T 11-11-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal SHALO_RS04770 9e85a0b3a938226f27997c425a63bc10 929 Gene3D G3DSA:3.40.228.10 181 296 6.6E-44 T 11-11-2016 SHALO_RS04770 9e85a0b3a938226f27997c425a63bc10 929 Gene3D G3DSA:3.40.228.10 369 450 6.6E-44 T 11-11-2016 SHALO_RS04770 9e85a0b3a938226f27997c425a63bc10 929 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 41 93 2.7E-18 T 11-11-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS04770 9e85a0b3a938226f27997c425a63bc10 929 SMART SM00926 40 94 1.5E-15 T 11-11-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS04770 9e85a0b3a938226f27997c425a63bc10 929 Gene3D G3DSA:2.20.25.90 38 95 8.2E-22 T 11-11-2016 SHALO_RS04770 9e85a0b3a938226f27997c425a63bc10 929 Gene3D G3DSA:2.40.40.20 806 929 5.3E-42 T 11-11-2016 SHALO_RS04770 9e85a0b3a938226f27997c425a63bc10 929 SUPERFAMILY SSF53706 39 817 7.85E-159 T 11-11-2016 SHALO_RS04770 9e85a0b3a938226f27997c425a63bc10 929 Hamap MF_01630 Nitrate reductase [napA]. 1 929 27.2 T 11-11-2016 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042128|GO:0042597|GO:0051539|GO:0055114 KEGG: 00910+1.7.99.4 SHALO_RS04770 9e85a0b3a938226f27997c425a63bc10 929 Gene3D G3DSA:3.40.50.740 700 743 5.4E-70 T 11-11-2016 SHALO_RS04770 9e85a0b3a938226f27997c425a63bc10 929 Gene3D G3DSA:3.40.50.740 451 626 5.4E-70 T 11-11-2016 SHALO_RS04770 9e85a0b3a938226f27997c425a63bc10 929 Gene3D G3DSA:3.40.50.740 97 180 5.4E-70 T 11-11-2016 SHALO_RS04770 9e85a0b3a938226f27997c425a63bc10 929 Pfam PF00384 Molybdopterin oxidoreductase 97 619 1.2E-66 T 11-11-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS14250 3dc4f6e5f97d97150decbc68668611d4 328 Gene3D G3DSA:2.40.50.100 55 87 1.6E-9 T 11-11-2016 SHALO_RS14250 3dc4f6e5f97d97150decbc68668611d4 328 Gene3D G3DSA:2.40.50.100 138 169 1.6E-9 T 11-11-2016 SHALO_RS14250 3dc4f6e5f97d97150decbc68668611d4 328 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 42 243 2.4E-53 T 11-11-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SHALO_RS14250 3dc4f6e5f97d97150decbc68668611d4 328 SUPERFAMILY SSF111369 54 247 3.92E-13 T 11-11-2016 SHALO_RS14250 3dc4f6e5f97d97150decbc68668611d4 328 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 137 313 1.2E-29 T 11-11-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 SHALO_RS12945 32cdf8e2fd6c4e7f659f922d48b6f4a1 392 Gene3D G3DSA:3.20.20.120 123 375 3.4E-76 T 11-11-2016 IPR029065 Enolase C-terminal domain-like SHALO_RS12945 32cdf8e2fd6c4e7f659f922d48b6f4a1 392 SUPERFAMILY SSF51604 106 384 1.44E-72 T 11-11-2016 IPR029065 Enolase C-terminal domain-like SHALO_RS12945 32cdf8e2fd6c4e7f659f922d48b6f4a1 392 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 23 118 2.2E-16 T 11-11-2016 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain SHALO_RS12945 32cdf8e2fd6c4e7f659f922d48b6f4a1 392 Pfam PF13378 Enolase C-terminal domain-like 152 380 6.2E-50 T 11-11-2016 IPR029065 Enolase C-terminal domain-like SHALO_RS12945 32cdf8e2fd6c4e7f659f922d48b6f4a1 392 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 93 118 - T 11-11-2016 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 SHALO_RS12945 32cdf8e2fd6c4e7f659f922d48b6f4a1 392 SUPERFAMILY SSF54826 1 123 1.69E-26 T 11-11-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SHALO_RS12945 32cdf8e2fd6c4e7f659f922d48b6f4a1 392 SMART SM00922 146 261 5.3E-11 T 11-11-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal SHALO_RS12945 32cdf8e2fd6c4e7f659f922d48b6f4a1 392 Gene3D G3DSA:3.30.390.10 1 122 8.3E-40 T 11-11-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SHALO_RS11640 5897e1daff92bd87017ddb76661b35a6 497 PIRSF PIRSF002741 14 497 1.4E-124 T 11-11-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 SHALO_RS11640 5897e1daff92bd87017ddb76661b35a6 497 Gene3D G3DSA:3.90.76.10 51 135 8.6E-24 T 11-11-2016 SHALO_RS11640 5897e1daff92bd87017ddb76661b35a6 497 Gene3D G3DSA:3.10.105.10 272 465 1.5E-51 T 11-11-2016 SHALO_RS11640 5897e1daff92bd87017ddb76661b35a6 497 SUPERFAMILY SSF53850 18 495 8.69E-125 T 11-11-2016 SHALO_RS11640 5897e1daff92bd87017ddb76661b35a6 497 Gene3D G3DSA:3.40.190.10 136 271 2.9E-33 T 11-11-2016 SHALO_RS11640 5897e1daff92bd87017ddb76661b35a6 497 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 61 408 4.3E-76 T 11-11-2016 IPR000914 Solute-binding protein family 5 domain SHALO_RS09510 d38314722e750da123833dd213c689af 310 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 20 257 3.3E-14 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase SHALO_RS09510 d38314722e750da123833dd213c689af 310 SUPERFAMILY SSF56219 16 305 1.13E-35 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase SHALO_RS09510 d38314722e750da123833dd213c689af 310 Gene3D G3DSA:3.60.10.10 291 305 4.2E-16 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase SHALO_RS09510 d38314722e750da123833dd213c689af 310 Gene3D G3DSA:3.60.10.10 17 259 4.2E-16 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase SHALO_RS00015 f91788dd2247966bed123aea5fa7efb7 770 Gene3D G3DSA:3.30.230.10 217 387 7.5E-63 T 11-11-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SHALO_RS00015 f91788dd2247966bed123aea5fa7efb7 770 Pfam PF00204 DNA gyrase B 218 385 2.0E-56 T 11-11-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 SHALO_RS00015 f91788dd2247966bed123aea5fa7efb7 770 SUPERFAMILY SSF56719 389 554 1.05E-86 T 11-11-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 SHALO_RS00015 f91788dd2247966bed123aea5fa7efb7 770 SUPERFAMILY SSF56719 696 765 1.05E-86 T 11-11-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 SHALO_RS00015 f91788dd2247966bed123aea5fa7efb7 770 PRINTS PR01159 DNA gyrase subunit B signature 465 474 4.6E-61 T 11-11-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SHALO_RS00015 f91788dd2247966bed123aea5fa7efb7 770 PRINTS PR01159 DNA gyrase subunit B signature 4 14 4.6E-61 T 11-11-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SHALO_RS00015 f91788dd2247966bed123aea5fa7efb7 770 PRINTS PR01159 DNA gyrase subunit B signature 193 206 4.6E-61 T 11-11-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SHALO_RS00015 f91788dd2247966bed123aea5fa7efb7 770 PRINTS PR01159 DNA gyrase subunit B signature 355 369 4.6E-61 T 11-11-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SHALO_RS00015 f91788dd2247966bed123aea5fa7efb7 770 PRINTS PR01159 DNA gyrase subunit B signature 178 193 4.6E-61 T 11-11-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SHALO_RS00015 f91788dd2247966bed123aea5fa7efb7 770 PRINTS PR01159 DNA gyrase subunit B signature 307 323 4.6E-61 T 11-11-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SHALO_RS00015 f91788dd2247966bed123aea5fa7efb7 770 PRINTS PR01159 DNA gyrase subunit B signature 237 255 4.6E-61 T 11-11-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SHALO_RS00015 f91788dd2247966bed123aea5fa7efb7 770 PRINTS PR01159 DNA gyrase subunit B signature 723 735 4.6E-61 T 11-11-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SHALO_RS00015 f91788dd2247966bed123aea5fa7efb7 770 PRINTS PR01159 DNA gyrase subunit B signature 369 389 4.6E-61 T 11-11-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SHALO_RS00015 f91788dd2247966bed123aea5fa7efb7 770 PRINTS PR01159 DNA gyrase subunit B signature 739 755 4.6E-61 T 11-11-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SHALO_RS00015 f91788dd2247966bed123aea5fa7efb7 770 ProSitePatterns PS00177 DNA topoisomerase II signature. 417 425 - T 11-11-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 SHALO_RS00015 f91788dd2247966bed123aea5fa7efb7 770 SUPERFAMILY SSF55874 4 215 1.51E-68 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS00015 f91788dd2247966bed123aea5fa7efb7 770 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 31 171 7.5E-19 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS00015 f91788dd2247966bed123aea5fa7efb7 770 Pfam PF01751 Toprim domain 414 524 8.8E-19 T 11-11-2016 IPR006171 Toprim domain SHALO_RS00015 f91788dd2247966bed123aea5fa7efb7 770 Gene3D G3DSA:3.40.50.670 687 752 6.0E-94 T 11-11-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 SHALO_RS00015 f91788dd2247966bed123aea5fa7efb7 770 Gene3D G3DSA:3.40.50.670 399 544 6.0E-94 T 11-11-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 SHALO_RS00015 f91788dd2247966bed123aea5fa7efb7 770 SMART SM00433 33 763 5.6E-279 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 SHALO_RS00015 f91788dd2247966bed123aea5fa7efb7 770 Gene3D G3DSA:3.30.565.10 4 214 3.9E-89 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS00015 f91788dd2247966bed123aea5fa7efb7 770 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 4 770 1.4E-291 T 11-11-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SHALO_RS00015 f91788dd2247966bed123aea5fa7efb7 770 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 1 770 94.776 T 11-11-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SHALO_RS00015 f91788dd2247966bed123aea5fa7efb7 770 PRINTS PR00418 DNA topoisomerase II family signature 263 276 2.3E-69 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 SHALO_RS00015 f91788dd2247966bed123aea5fa7efb7 770 PRINTS PR00418 DNA topoisomerase II family signature 111 125 2.3E-69 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 SHALO_RS00015 f91788dd2247966bed123aea5fa7efb7 770 PRINTS PR00418 DNA topoisomerase II family signature 68 81 2.3E-69 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 SHALO_RS00015 f91788dd2247966bed123aea5fa7efb7 770 PRINTS PR00418 DNA topoisomerase II family signature 33 48 2.3E-69 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 SHALO_RS00015 f91788dd2247966bed123aea5fa7efb7 770 PRINTS PR00418 DNA topoisomerase II family signature 499 516 2.3E-69 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 SHALO_RS00015 f91788dd2247966bed123aea5fa7efb7 770 PRINTS PR00418 DNA topoisomerase II family signature 519 531 2.3E-69 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 SHALO_RS00015 f91788dd2247966bed123aea5fa7efb7 770 PRINTS PR00418 DNA topoisomerase II family signature 702 718 2.3E-69 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 SHALO_RS00015 f91788dd2247966bed123aea5fa7efb7 770 PRINTS PR00418 DNA topoisomerase II family signature 415 429 2.3E-69 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 SHALO_RS00015 f91788dd2247966bed123aea5fa7efb7 770 PRINTS PR00418 DNA topoisomerase II family signature 481 497 2.3E-69 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 SHALO_RS00015 f91788dd2247966bed123aea5fa7efb7 770 SMART SM00387 29 173 3.1E-21 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS00015 f91788dd2247966bed123aea5fa7efb7 770 SUPERFAMILY SSF54211 218 386 2.85E-52 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SHALO_RS00015 f91788dd2247966bed123aea5fa7efb7 770 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 698 759 4.2E-29 T 11-11-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 SHALO_RS07205 7c39648ad8d2532347424f669675bf79 147 SUPERFAMILY SSF52833 2 133 8.15E-6 T 11-11-2016 IPR012336 Thioredoxin-like fold SHALO_RS07205 7c39648ad8d2532347424f669675bf79 147 Gene3D G3DSA:3.40.30.10 78 131 7.3E-5 T 11-11-2016 IPR012336 Thioredoxin-like fold SHALO_RS14300 2704ec437201c486a46403e73651a3ac 176 ProSitePatterns PS00332 Copper/Zinc superoxide dismutase signature 2. 164 175 - T 11-11-2016 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 SHALO_RS14300 2704ec437201c486a46403e73651a3ac 176 SUPERFAMILY SSF49329 25 176 1.44E-43 T 11-11-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 SHALO_RS14300 2704ec437201c486a46403e73651a3ac 176 Gene3D G3DSA:2.60.40.200 24 176 9.3E-43 T 11-11-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 SHALO_RS14300 2704ec437201c486a46403e73651a3ac 176 ProSitePatterns PS00087 Copper/Zinc superoxide dismutase signature 1. 66 76 - T 11-11-2016 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 SHALO_RS14300 2704ec437201c486a46403e73651a3ac 176 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 36 175 1.0E-28 T 11-11-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 SHALO_RS12565 43c8a5da8b4ac175f7b5a44fc9223e0d 699 Gene3D G3DSA:3.40.50.1000 518 658 2.0E-43 T 11-11-2016 IPR023214 HAD-like domain SHALO_RS12565 43c8a5da8b4ac175f7b5a44fc9223e0d 699 Gene3D G3DSA:3.40.50.1000 366 404 2.0E-43 T 11-11-2016 IPR023214 HAD-like domain SHALO_RS12565 43c8a5da8b4ac175f7b5a44fc9223e0d 699 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 145 691 2.3E-144 T 11-11-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 SHALO_RS12565 43c8a5da8b4ac175f7b5a44fc9223e0d 699 ProSitePatterns PS01229 Hypothetical cof family signature 2. 591 613 - T 11-11-2016 SHALO_RS12565 43c8a5da8b4ac175f7b5a44fc9223e0d 699 SUPERFAMILY SSF56784 447 691 2.28E-45 T 11-11-2016 IPR023214 HAD-like domain SHALO_RS12565 43c8a5da8b4ac175f7b5a44fc9223e0d 699 SUPERFAMILY SSF56784 387 407 2.28E-45 T 11-11-2016 IPR023214 HAD-like domain SHALO_RS12565 43c8a5da8b4ac175f7b5a44fc9223e0d 699 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 391 397 - T 11-11-2016 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 SHALO_RS12565 43c8a5da8b4ac175f7b5a44fc9223e0d 699 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 168 670 3.3E-73 T 11-11-2016 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 SHALO_RS12565 43c8a5da8b4ac175f7b5a44fc9223e0d 699 Gene3D G3DSA:3.40.1110.10 405 517 2.3E-14 T 11-11-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 SHALO_RS12565 43c8a5da8b4ac175f7b5a44fc9223e0d 699 SUPERFAMILY SSF81653 210 296 1.83E-21 T 11-11-2016 SHALO_RS12565 43c8a5da8b4ac175f7b5a44fc9223e0d 699 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 614 626 2.0E-24 T 11-11-2016 SHALO_RS12565 43c8a5da8b4ac175f7b5a44fc9223e0d 699 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 247 261 2.0E-24 T 11-11-2016 SHALO_RS12565 43c8a5da8b4ac175f7b5a44fc9223e0d 699 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 591 610 2.0E-24 T 11-11-2016 SHALO_RS12565 43c8a5da8b4ac175f7b5a44fc9223e0d 699 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 389 403 2.0E-24 T 11-11-2016 SHALO_RS12565 43c8a5da8b4ac175f7b5a44fc9223e0d 699 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 538 548 2.0E-24 T 11-11-2016 SHALO_RS12565 43c8a5da8b4ac175f7b5a44fc9223e0d 699 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 515 526 2.0E-24 T 11-11-2016 SHALO_RS12565 43c8a5da8b4ac175f7b5a44fc9223e0d 699 Pfam PF00702 haloacid dehalogenase-like hydrolase 385 605 1.4E-33 T 11-11-2016 SHALO_RS12565 43c8a5da8b4ac175f7b5a44fc9223e0d 699 Pfam PF00122 E1-E2 ATPase 169 380 4.2E-41 T 11-11-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 SHALO_RS12565 43c8a5da8b4ac175f7b5a44fc9223e0d 699 Gene3D G3DSA:2.70.150.10 188 297 1.0E-23 T 11-11-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 SHALO_RS04145 5ba2cd0b5cd614415ac1f283ea7d9ec5 96 Gene3D G3DSA:3.30.460.10 3 96 1.0E-23 T 11-11-2016 SHALO_RS04145 5ba2cd0b5cd614415ac1f283ea7d9ec5 96 SUPERFAMILY SSF81301 5 96 1.78E-18 T 11-11-2016 SHALO_RS04145 5ba2cd0b5cd614415ac1f283ea7d9ec5 96 Pfam PF01909 Nucleotidyltransferase domain 10 95 2.2E-11 T 11-11-2016 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 SHALO_RS01785 fd8f3146cdb3c8f4e6b191531163a9bd 161 Gene3D G3DSA:1.10.760.10 85 148 7.1E-14 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS01785 fd8f3146cdb3c8f4e6b191531163a9bd 161 Pfam PF00034 Cytochrome c 85 137 1.0E-4 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS01785 fd8f3146cdb3c8f4e6b191531163a9bd 161 SUPERFAMILY SSF46626 84 147 8.45E-12 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS14830 c23354210287cefbeb32d13343b7556f 151 Gene3D G3DSA:1.10.10.10 67 148 1.6E-32 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS14830 c23354210287cefbeb32d13343b7556f 151 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 1 150 36.146 T 11-11-2016 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 SHALO_RS14830 c23354210287cefbeb32d13343b7556f 151 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 118 124 - T 11-11-2016 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 SHALO_RS14830 c23354210287cefbeb32d13343b7556f 151 SUPERFAMILY SSF46767 67 148 6.28E-30 T 11-11-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 SHALO_RS14830 c23354210287cefbeb32d13343b7556f 151 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 68 147 8.8E-34 T 11-11-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 SHALO_RS14830 c23354210287cefbeb32d13343b7556f 151 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 70 148 2.4E-30 T 11-11-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 SHALO_RS14830 c23354210287cefbeb32d13343b7556f 151 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 2 64 3.5E-10 T 11-11-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 SHALO_RS14830 c23354210287cefbeb32d13343b7556f 151 Gene3D G3DSA:3.30.160.70 3 42 7.4E-5 T 11-11-2016 SHALO_RS14830 c23354210287cefbeb32d13343b7556f 151 SUPERFAMILY SSF53155 1 72 1.16E-16 T 11-11-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 SHALO_RS04050 7afed28eee21ab878a8cd37cb2da49d2 528 SUPERFAMILY SSF51735 103 285 3.49E-51 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS04050 7afed28eee21ab878a8cd37cb2da49d2 528 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 147 174 - T 11-11-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 SHALO_RS04050 7afed28eee21ab878a8cd37cb2da49d2 528 Gene3D G3DSA:3.30.1330.90 323 449 4.4E-38 T 11-11-2016 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 SHALO_RS04050 7afed28eee21ab878a8cd37cb2da49d2 528 Gene3D G3DSA:3.40.50.720 4 109 7.8E-33 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS04050 7afed28eee21ab878a8cd37cb2da49d2 528 SUPERFAMILY SSF143548 323 451 1.33E-31 T 11-11-2016 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 SHALO_RS04050 7afed28eee21ab878a8cd37cb2da49d2 528 SUPERFAMILY SSF55021 445 524 7.82E-15 T 11-11-2016 SHALO_RS04050 7afed28eee21ab878a8cd37cb2da49d2 528 TIGRFAM TIGR01327 PGDH: phosphoglycerate dehydrogenase 5 526 4.0E-184 T 11-11-2016 IPR006236 D-3-phosphoglycerate dehydrogenase GO:0004617|GO:0006564 KEGG: 00260+1.1.1.95|KEGG: 00680+1.1.1.95|Reactome: R-HSA-977347 SHALO_RS04050 7afed28eee21ab878a8cd37cb2da49d2 528 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 109 284 1.4E-52 T 11-11-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 SHALO_RS04050 7afed28eee21ab878a8cd37cb2da49d2 528 Gene3D G3DSA:3.30.70.260 450 525 2.7E-20 T 11-11-2016 SHALO_RS04050 7afed28eee21ab878a8cd37cb2da49d2 528 Gene3D G3DSA:3.40.50.720 110 285 2.7E-59 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS04050 7afed28eee21ab878a8cd37cb2da49d2 528 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 6 316 3.0E-31 T 11-11-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 SHALO_RS04050 7afed28eee21ab878a8cd37cb2da49d2 528 SUPERFAMILY SSF52283 26 123 7.94E-31 T 11-11-2016 SHALO_RS04050 7afed28eee21ab878a8cd37cb2da49d2 528 Pfam PF01842 ACT domain 457 518 1.7E-8 T 11-11-2016 IPR002912 ACT domain GO:0008152|GO:0016597 SHALO_RS06450 0123fea692117ad6ee21f11c81e8e449 218 SUPERFAMILY SSF52172 1 170 8.4E-33 T 11-11-2016 IPR011006 CheY-like superfamily SHALO_RS06450 0123fea692117ad6ee21f11c81e8e449 218 Pfam PF00072 Response regulator receiver domain 3 112 2.3E-23 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS06450 0123fea692117ad6ee21f11c81e8e449 218 Gene3D G3DSA:1.10.10.10 128 218 6.2E-23 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS06450 0123fea692117ad6ee21f11c81e8e449 218 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 217 1.4E-20 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS06450 0123fea692117ad6ee21f11c81e8e449 218 SMART SM00862 146 217 5.5E-19 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS06450 0123fea692117ad6ee21f11c81e8e449 218 Gene3D G3DSA:3.40.50.2300 1 121 2.1E-31 T 11-11-2016 SHALO_RS06450 0123fea692117ad6ee21f11c81e8e449 218 SMART SM00448 1 112 3.9E-31 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS05820 ab9f14e7fdb3f3ae51cb2f8a4a57faa5 230 SMART SM00448 5 116 2.8E-24 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS05820 ab9f14e7fdb3f3ae51cb2f8a4a57faa5 230 Gene3D G3DSA:3.40.50.2300 3 153 4.0E-26 T 11-11-2016 SHALO_RS05820 ab9f14e7fdb3f3ae51cb2f8a4a57faa5 230 Gene3D G3DSA:1.10.10.10 154 227 1.6E-15 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS05820 ab9f14e7fdb3f3ae51cb2f8a4a57faa5 230 SUPERFAMILY SSF52172 5 187 2.28E-29 T 11-11-2016 IPR011006 CheY-like superfamily SHALO_RS05820 ab9f14e7fdb3f3ae51cb2f8a4a57faa5 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 158 225 1.3E-13 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS05820 ab9f14e7fdb3f3ae51cb2f8a4a57faa5 230 SMART SM00862 154 225 5.8E-10 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS05820 ab9f14e7fdb3f3ae51cb2f8a4a57faa5 230 Pfam PF00072 Response regulator receiver domain 8 114 7.1E-21 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS03520 e618e701abd7031d2ca0c2f125b797c6 247 Pfam PF00459 Inositol monophosphatase family 43 129 2.3E-8 T 11-11-2016 IPR000760 Inositol monophosphatase GO:0046854 SHALO_RS03520 e618e701abd7031d2ca0c2f125b797c6 247 SUPERFAMILY SSF56655 9 219 4.71E-22 T 11-11-2016 SHALO_RS03520 e618e701abd7031d2ca0c2f125b797c6 247 Gene3D G3DSA:3.30.540.10 10 129 1.6E-16 T 11-11-2016 SHALO_RS05305 2c6c518deb1df0465e6ddf533d29d482 317 SUPERFAMILY SSF53187 31 309 5.95E-54 T 11-11-2016 SHALO_RS05305 2c6c518deb1df0465e6ddf533d29d482 317 Gene3D G3DSA:3.40.630.10 31 218 8.4E-15 T 11-11-2016 SHALO_RS05305 2c6c518deb1df0465e6ddf533d29d482 317 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 32 307 2.2E-31 T 11-11-2016 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 SHALO_RS01820 ef2fdf9130563d7dada533226cb854dd 229 SUPERFAMILY SSF52172 12 178 9.68E-33 T 11-11-2016 IPR011006 CheY-like superfamily SHALO_RS01820 ef2fdf9130563d7dada533226cb854dd 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 160 226 3.4E-10 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS01820 ef2fdf9130563d7dada533226cb854dd 229 Gene3D G3DSA:1.10.10.10 159 228 7.6E-12 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS01820 ef2fdf9130563d7dada533226cb854dd 229 SMART SM00862 157 227 9.0E-9 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS01820 ef2fdf9130563d7dada533226cb854dd 229 Gene3D G3DSA:3.40.50.2300 11 158 1.3E-30 T 11-11-2016 SHALO_RS01820 ef2fdf9130563d7dada533226cb854dd 229 SMART SM00448 12 123 6.3E-24 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS01820 ef2fdf9130563d7dada533226cb854dd 229 Pfam PF00072 Response regulator receiver domain 15 122 4.9E-25 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS01820 ef2fdf9130563d7dada533226cb854dd 229 SUPERFAMILY SSF46894 150 227 1.6E-9 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SHALO_RS14285 e45f23d53b71f8abae4a1efc0ba9c3a6 317 Gene3D G3DSA:3.40.50.300 2 239 2.8E-71 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS14285 e45f23d53b71f8abae4a1efc0ba9c3a6 317 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHALO_RS14285 e45f23d53b71f8abae4a1efc0ba9c3a6 317 SMART SM00382 31 211 1.1E-13 T 11-11-2016 IPR003593 AAA+ ATPase domain SHALO_RS14285 e45f23d53b71f8abae4a1efc0ba9c3a6 317 SUPERFAMILY SSF52540 4 240 2.84E-72 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS14285 e45f23d53b71f8abae4a1efc0ba9c3a6 317 Pfam PF00005 ABC transporter 23 161 1.2E-34 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_RS03595 b490881bd5825af5518da47b76681c2a 184 Gene3D G3DSA:3.30.460.10 9 179 5.2E-40 T 11-11-2016 SHALO_RS03595 b490881bd5825af5518da47b76681c2a 184 SUPERFAMILY SSF81301 14 179 5.89E-35 T 11-11-2016 SHALO_RS03595 b490881bd5825af5518da47b76681c2a 184 Pfam PF04229 GrpB protein 11 173 1.3E-36 T 11-11-2016 IPR007344 GrpB/Dephospho-CoA kinase SHALO_RS11505 9ce44e2f60b87c7c69ce0d64b7a993a9 266 Pfam PF12800 4Fe-4S binding domain 64 77 0.02 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_RS11505 9ce44e2f60b87c7c69ce0d64b7a993a9 266 Gene3D G3DSA:3.30.70.20 122 160 5.7E-24 T 11-11-2016 SHALO_RS11505 9ce44e2f60b87c7c69ce0d64b7a993a9 266 Pfam PF13247 4Fe-4S dicluster domain 104 197 6.6E-29 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_RS11505 9ce44e2f60b87c7c69ce0d64b7a993a9 266 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 142 153 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_RS11505 9ce44e2f60b87c7c69ce0d64b7a993a9 266 Gene3D G3DSA:3.30.70.20 161 233 1.1E-25 T 11-11-2016 SHALO_RS11505 9ce44e2f60b87c7c69ce0d64b7a993a9 266 Gene3D G3DSA:3.30.70.20 54 121 1.8E-18 T 11-11-2016 SHALO_RS11505 9ce44e2f60b87c7c69ce0d64b7a993a9 266 SUPERFAMILY SSF54862 54 237 7.85E-73 T 11-11-2016 SHALO_RS13315 72780da8d0dba2b1751b4e1e2458a732 200 PRINTS PR00354 7Fe ferredoxin signature 58 68 9.2E-6 T 11-11-2016 IPR000813 7Fe ferredoxin GO:0009055 SHALO_RS13315 72780da8d0dba2b1751b4e1e2458a732 200 PRINTS PR00354 7Fe ferredoxin signature 85 102 9.2E-6 T 11-11-2016 IPR000813 7Fe ferredoxin GO:0009055 SHALO_RS13315 72780da8d0dba2b1751b4e1e2458a732 200 PRINTS PR00354 7Fe ferredoxin signature 68 78 9.2E-6 T 11-11-2016 IPR000813 7Fe ferredoxin GO:0009055 SHALO_RS13315 72780da8d0dba2b1751b4e1e2458a732 200 SUPERFAMILY SSF54862 4 183 7.12E-49 T 11-11-2016 SHALO_RS13315 72780da8d0dba2b1751b4e1e2458a732 200 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 90 101 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_RS13315 72780da8d0dba2b1751b4e1e2458a732 200 Gene3D G3DSA:3.30.70.20 66 121 3.2E-22 T 11-11-2016 SHALO_RS13315 72780da8d0dba2b1751b4e1e2458a732 200 Gene3D G3DSA:3.30.70.20 122 184 2.2E-20 T 11-11-2016 SHALO_RS13315 72780da8d0dba2b1751b4e1e2458a732 200 Gene3D G3DSA:3.30.70.20 5 65 2.2E-20 T 11-11-2016 SHALO_RS13315 72780da8d0dba2b1751b4e1e2458a732 200 Pfam PF13247 4Fe-4S dicluster domain 55 126 1.2E-10 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_RS08105 1d1e805df5c1e93995a0dd8331d12214 464 TIGRFAM TIGR02931 anfK_nitrog: Fe-only nitrogenase, beta subunit 2 464 3.9E-272 T 11-11-2016 IPR014280 Nitrogenase iron-iron, beta subunit GO:0009399|GO:0016163 KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 SHALO_RS08105 1d1e805df5c1e93995a0dd8331d12214 464 Gene3D G3DSA:3.40.50.1980 296 423 9.1E-40 T 11-11-2016 SHALO_RS08105 1d1e805df5c1e93995a0dd8331d12214 464 Gene3D G3DSA:3.40.50.1980 20 167 2.3E-47 T 11-11-2016 SHALO_RS08105 1d1e805df5c1e93995a0dd8331d12214 464 ProSitePatterns PS00090 Nitrogenases component 1 alpha and beta subunits signature 2. 102 116 - T 11-11-2016 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 SHALO_RS08105 1d1e805df5c1e93995a0dd8331d12214 464 SUPERFAMILY SSF53807 9 459 2.94E-131 T 11-11-2016 SHALO_RS08105 1d1e805df5c1e93995a0dd8331d12214 464 Gene3D G3DSA:3.40.50.1980 168 270 1.3E-28 T 11-11-2016 SHALO_RS08105 1d1e805df5c1e93995a0dd8331d12214 464 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 20 447 1.3E-117 T 11-11-2016 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 SHALO_RS08105 1d1e805df5c1e93995a0dd8331d12214 464 ProSitePatterns PS00699 Nitrogenases component 1 alpha and beta subunits signature 1. 38 45 - T 11-11-2016 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 SHALO_RS11950 928a07f46380e9a85bbbcc0730030238 782 Pfam PF12705 PD-(D/E)XK nuclease superfamily 542 776 2.6E-32 T 11-11-2016 SHALO_RS11950 928a07f46380e9a85bbbcc0730030238 782 SUPERFAMILY SSF52980 543 723 1.02E-10 T 11-11-2016 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 SHALO_RS11950 928a07f46380e9a85bbbcc0730030238 782 SUPERFAMILY SSF52540 224 502 7.3E-21 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS11950 928a07f46380e9a85bbbcc0730030238 782 Gene3D G3DSA:3.40.50.300 221 311 1.5E-7 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS11950 928a07f46380e9a85bbbcc0730030238 782 Gene3D G3DSA:3.40.50.300 409 501 1.5E-7 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS13540 ded4edd72462f8b55e7a9981db62bc83 188 Gene3D G3DSA:2.40.128.110 20 186 3.3E-56 T 11-11-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like SHALO_RS13540 ded4edd72462f8b55e7a9981db62bc83 188 SMART SM00867 21 185 4.6E-65 T 11-11-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like SHALO_RS13540 ded4edd72462f8b55e7a9981db62bc83 188 Pfam PF04264 YceI-like domain 22 183 2.3E-41 T 11-11-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like SHALO_RS13540 ded4edd72462f8b55e7a9981db62bc83 188 SUPERFAMILY SSF101874 20 185 3.4E-51 T 11-11-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like SHALO_RS03435 1e919ea603a9e0ea5782cc7d082f8787 294 Gene3D G3DSA:1.10.287.80 242 288 2.5E-25 T 11-11-2016 SHALO_RS03435 1e919ea603a9e0ea5782cc7d082f8787 294 Gene3D G3DSA:1.10.287.80 206 241 1.4E-24 T 11-11-2016 SHALO_RS03435 1e919ea603a9e0ea5782cc7d082f8787 294 Gene3D G3DSA:1.10.287.80 19 60 1.4E-24 T 11-11-2016 SHALO_RS03435 1e919ea603a9e0ea5782cc7d082f8787 294 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 293 31.691 T 11-11-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 SHALO_RS03435 1e919ea603a9e0ea5782cc7d082f8787 294 PRINTS PR00126 ATP synthase gamma subunit signature 79 98 5.3E-30 T 11-11-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 SHALO_RS03435 1e919ea603a9e0ea5782cc7d082f8787 294 PRINTS PR00126 ATP synthase gamma subunit signature 271 292 5.3E-30 T 11-11-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 SHALO_RS03435 1e919ea603a9e0ea5782cc7d082f8787 294 PRINTS PR00126 ATP synthase gamma subunit signature 240 259 5.3E-30 T 11-11-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 SHALO_RS03435 1e919ea603a9e0ea5782cc7d082f8787 294 PRINTS PR00126 ATP synthase gamma subunit signature 172 189 5.3E-30 T 11-11-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 SHALO_RS03435 1e919ea603a9e0ea5782cc7d082f8787 294 SUPERFAMILY SSF52943 2 292 7.85E-78 T 11-11-2016 IPR023633 ATPase, F1 complex, gamma subunit domain Reactome: R-HSA-163210 SHALO_RS03435 1e919ea603a9e0ea5782cc7d082f8787 294 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 292 4.7E-92 T 11-11-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 SHALO_RS03435 1e919ea603a9e0ea5782cc7d082f8787 294 Gene3D G3DSA:3.40.1380.10 71 197 2.0E-34 T 11-11-2016 SHALO_RS03435 1e919ea603a9e0ea5782cc7d082f8787 294 Pfam PF00231 ATP synthase 3 292 4.6E-82 T 11-11-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 SHALO_RS02320 1a07a512759817a1b23e740c03ce5236 251 Gene3D G3DSA:3.40.50.720 2 234 1.9E-63 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS02320 1a07a512759817a1b23e740c03ce5236 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 76 87 1.9E-8 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_RS02320 1a07a512759817a1b23e740c03ce5236 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 1.9E-8 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_RS02320 1a07a512759817a1b23e740c03ce5236 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 1.9E-8 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_RS02320 1a07a512759817a1b23e740c03ce5236 251 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 137 165 - T 11-11-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 SHALO_RS02320 1a07a512759817a1b23e740c03ce5236 251 SUPERFAMILY SSF51735 3 233 1.52E-60 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS02320 1a07a512759817a1b23e740c03ce5236 251 Pfam PF00106 short chain dehydrogenase 3 189 7.4E-54 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_RS02320 1a07a512759817a1b23e740c03ce5236 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 3.4E-21 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_RS02320 1a07a512759817a1b23e740c03ce5236 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 3.4E-21 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_RS02320 1a07a512759817a1b23e740c03ce5236 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 3.4E-21 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_RS02320 1a07a512759817a1b23e740c03ce5236 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 3.4E-21 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_RS02320 1a07a512759817a1b23e740c03ce5236 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 3.4E-21 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_RS11510 b91e19c7186cf086ee7d0276f002b896 561 SUPERFAMILY SSF47384 337 411 1.94E-5 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS11510 b91e19c7186cf086ee7d0276f002b896 561 Gene3D G3DSA:3.30.565.10 414 561 8.2E-28 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS11510 b91e19c7186cf086ee7d0276f002b896 561 SMART SM00387 453 561 1.2E-9 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS11510 b91e19c7186cf086ee7d0276f002b896 561 PRINTS PR00344 Bacterial sensor protein C-terminal signature 549 561 2.3E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS11510 b91e19c7186cf086ee7d0276f002b896 561 PRINTS PR00344 Bacterial sensor protein C-terminal signature 494 508 2.3E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS11510 b91e19c7186cf086ee7d0276f002b896 561 PRINTS PR00344 Bacterial sensor protein C-terminal signature 525 543 2.3E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS11510 b91e19c7186cf086ee7d0276f002b896 561 PRINTS PR00344 Bacterial sensor protein C-terminal signature 512 522 2.3E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS11510 b91e19c7186cf086ee7d0276f002b896 561 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 455 558 1.8E-13 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS11510 b91e19c7186cf086ee7d0276f002b896 561 SUPERFAMILY SSF55874 411 561 9.17E-30 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS03375 a06f78c973e7e3da4bb2785df0649e24 102 ProSitePatterns PS01169 Ribosomal protein L21 signature. 71 93 - T 11-11-2016 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_RS03375 a06f78c973e7e3da4bb2785df0649e24 102 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 100 3.1E-36 T 11-11-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS03375 a06f78c973e7e3da4bb2785df0649e24 102 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 100 1.8E-34 T 11-11-2016 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS03375 a06f78c973e7e3da4bb2785df0649e24 102 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 102 24.155 T 11-11-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS03375 a06f78c973e7e3da4bb2785df0649e24 102 SUPERFAMILY SSF141091 1 100 7.72E-33 T 11-11-2016 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS10135 237aaae6d0a022288fff056883f8b548 573 SUPERFAMILY SSF55486 42 568 1.6E-100 T 11-11-2016 SHALO_RS10135 237aaae6d0a022288fff056883f8b548 573 TIGRFAM TIGR02290 M3_fam_3: oligoendopeptidase, pepF/M3 family 2 569 2.6E-172 T 11-11-2016 IPR011977 Peptidase M3B, oligoendopeptidase-related clade 3 SHALO_RS10135 237aaae6d0a022288fff056883f8b548 573 Pfam PF08439 Oligopeptidase F 100 166 5.1E-11 T 11-11-2016 IPR013647 Oligopeptidase F, N-terminal domain SHALO_RS10135 237aaae6d0a022288fff056883f8b548 573 Gene3D G3DSA:3.40.390.10 324 401 9.4E-6 T 11-11-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 SHALO_RS10135 237aaae6d0a022288fff056883f8b548 573 Pfam PF01432 Peptidase family M3 183 554 7.1E-53 T 11-11-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 SHALO_RS13195 dd072687297d4a79dc21235b734f3197 431 Gene3D G3DSA:1.10.150.20 211 277 9.0E-12 T 11-11-2016 SHALO_RS13195 dd072687297d4a79dc21235b734f3197 431 SUPERFAMILY SSF56672 83 278 8.9E-54 T 11-11-2016 SHALO_RS13195 dd072687297d4a79dc21235b734f3197 431 SUPERFAMILY SSF56672 1 36 8.9E-54 T 11-11-2016 SHALO_RS13195 dd072687297d4a79dc21235b734f3197 431 Gene3D G3DSA:3.30.70.270 112 209 6.2E-19 T 11-11-2016 SHALO_RS13195 dd072687297d4a79dc21235b734f3197 431 Pfam PF00817 impB/mucB/samB family 5 199 1.7E-42 T 11-11-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 SHALO_RS13195 dd072687297d4a79dc21235b734f3197 431 SUPERFAMILY SSF100879 281 381 1.15E-6 T 11-11-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 SHALO_RS00310 8524ce94ea2d9d66c94e196b0cf3be67 860 Pfam PF13424 Tetratricopeptide repeat 567 641 4.7E-11 T 11-11-2016 SHALO_RS00310 8524ce94ea2d9d66c94e196b0cf3be67 860 Pfam PF13424 Tetratricopeptide repeat 691 765 3.3E-15 T 11-11-2016 SHALO_RS00310 8524ce94ea2d9d66c94e196b0cf3be67 860 SUPERFAMILY SSF48452 644 763 3.79E-20 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SHALO_RS00310 8524ce94ea2d9d66c94e196b0cf3be67 860 Gene3D G3DSA:1.25.40.10 627 666 2.9E-10 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SHALO_RS00310 8524ce94ea2d9d66c94e196b0cf3be67 860 SMART SM00028 650 683 0.0037 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SHALO_RS00310 8524ce94ea2d9d66c94e196b0cf3be67 860 SMART SM00028 526 559 0.22 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SHALO_RS00310 8524ce94ea2d9d66c94e196b0cf3be67 860 SMART SM00028 610 643 0.084 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SHALO_RS00310 8524ce94ea2d9d66c94e196b0cf3be67 860 SMART SM00028 734 767 0.033 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SHALO_RS00310 8524ce94ea2d9d66c94e196b0cf3be67 860 SMART SM00028 776 809 55.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SHALO_RS00310 8524ce94ea2d9d66c94e196b0cf3be67 860 SMART SM00028 568 601 0.0019 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SHALO_RS00310 8524ce94ea2d9d66c94e196b0cf3be67 860 SMART SM00028 692 725 0.85 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SHALO_RS00310 8524ce94ea2d9d66c94e196b0cf3be67 860 SUPERFAMILY SSF103642 838 858 3.27E-6 T 11-11-2016 SHALO_RS00310 8524ce94ea2d9d66c94e196b0cf3be67 860 Gene3D G3DSA:1.25.40.10 513 626 2.5E-16 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SHALO_RS00310 8524ce94ea2d9d66c94e196b0cf3be67 860 Pfam PF13374 Tetratricopeptide repeat 775 815 1.0E-4 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SHALO_RS00310 8524ce94ea2d9d66c94e196b0cf3be67 860 Gene3D G3DSA:3.10.450.50 823 858 1.1E-10 T 11-11-2016 IPR032710 NTF2-like domain SHALO_RS00310 8524ce94ea2d9d66c94e196b0cf3be67 860 SUPERFAMILY SSF48452 527 684 1.24E-22 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SHALO_RS00310 8524ce94ea2d9d66c94e196b0cf3be67 860 Pfam PF02810 SEC-C motif 841 858 3.4E-8 T 11-11-2016 IPR004027 SEC-C motif SHALO_RS00310 8524ce94ea2d9d66c94e196b0cf3be67 860 Gene3D G3DSA:1.25.40.10 667 804 1.7E-15 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SHALO_RS00310 8524ce94ea2d9d66c94e196b0cf3be67 860 SUPERFAMILY SSF52540 172 372 8.71E-19 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS10125 d5154b1dcec19a970f17c99e8683e3e7 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 1.6E-18 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SHALO_RS10125 d5154b1dcec19a970f17c99e8683e3e7 301 Pfam PF03466 LysR substrate binding domain 95 295 7.4E-19 T 11-11-2016 IPR005119 LysR, substrate-binding SHALO_RS10125 d5154b1dcec19a970f17c99e8683e3e7 301 Gene3D G3DSA:3.40.190.10 96 189 1.5E-13 T 11-11-2016 SHALO_RS10125 d5154b1dcec19a970f17c99e8683e3e7 301 Gene3D G3DSA:3.40.190.10 190 257 3.7E-4 T 11-11-2016 SHALO_RS10125 d5154b1dcec19a970f17c99e8683e3e7 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 1.0E-7 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SHALO_RS10125 d5154b1dcec19a970f17c99e8683e3e7 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 1.0E-7 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SHALO_RS10125 d5154b1dcec19a970f17c99e8683e3e7 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 1.0E-7 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SHALO_RS10125 d5154b1dcec19a970f17c99e8683e3e7 301 SUPERFAMILY SSF46785 3 112 7.55E-21 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS10125 d5154b1dcec19a970f17c99e8683e3e7 301 SUPERFAMILY SSF53850 93 294 6.88E-19 T 11-11-2016 SHALO_RS10125 d5154b1dcec19a970f17c99e8683e3e7 301 Gene3D G3DSA:1.10.10.10 4 84 3.2E-23 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS08620 872c272a653c8f61087f06786cab31d1 175 Pfam PF01025 GrpE 17 175 1.3E-50 T 11-11-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 SHALO_RS08620 872c272a653c8f61087f06786cab31d1 175 Hamap MF_01151 Protein GrpE [grpE]. 7 175 20.266 T 11-11-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 SHALO_RS08620 872c272a653c8f61087f06786cab31d1 175 Gene3D G3DSA:2.30.22.10 126 175 1.3E-22 T 11-11-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 SHALO_RS08620 872c272a653c8f61087f06786cab31d1 175 PRINTS PR00773 GrpE protein signature 69 84 3.2E-29 T 11-11-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 SHALO_RS08620 872c272a653c8f61087f06786cab31d1 175 PRINTS PR00773 GrpE protein signature 154 173 3.2E-29 T 11-11-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 SHALO_RS08620 872c272a653c8f61087f06786cab31d1 175 PRINTS PR00773 GrpE protein signature 41 57 3.2E-29 T 11-11-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 SHALO_RS08620 872c272a653c8f61087f06786cab31d1 175 PRINTS PR00773 GrpE protein signature 127 142 3.2E-29 T 11-11-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 SHALO_RS08620 872c272a653c8f61087f06786cab31d1 175 Gene3D G3DSA:3.90.20.20 21 119 6.4E-28 T 11-11-2016 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 SHALO_RS08620 872c272a653c8f61087f06786cab31d1 175 SUPERFAMILY SSF51064 126 175 2.75E-16 T 11-11-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 SHALO_RS08620 872c272a653c8f61087f06786cab31d1 175 ProSitePatterns PS01071 grpE protein signature. 130 173 - T 11-11-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 SHALO_RS08620 872c272a653c8f61087f06786cab31d1 175 SUPERFAMILY SSF58014 22 120 1.57E-24 T 11-11-2016 SHALO_RS01555 ae8e8d651ac92961b203a960c67f7c9a 763 Gene3D G3DSA:2.20.25.90 43 101 1.3E-16 T 11-11-2016 SHALO_RS01555 ae8e8d651ac92961b203a960c67f7c9a 763 Gene3D G3DSA:3.40.50.740 102 177 6.5E-50 T 11-11-2016 SHALO_RS01555 ae8e8d651ac92961b203a960c67f7c9a 763 Gene3D G3DSA:3.40.50.740 363 553 6.5E-50 T 11-11-2016 SHALO_RS01555 ae8e8d651ac92961b203a960c67f7c9a 763 SUPERFAMILY SSF53706 45 578 1.44E-136 T 11-11-2016 SHALO_RS01555 ae8e8d651ac92961b203a960c67f7c9a 763 Gene3D G3DSA:2.40.40.20 631 763 9.1E-32 T 11-11-2016 SHALO_RS01555 ae8e8d651ac92961b203a960c67f7c9a 763 SMART SM00926 44 98 9.6E-12 T 11-11-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS01555 ae8e8d651ac92961b203a960c67f7c9a 763 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 679 706 - T 11-11-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 SHALO_RS01555 ae8e8d651ac92961b203a960c67f7c9a 763 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 478 495 - T 11-11-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 SHALO_RS01555 ae8e8d651ac92961b203a960c67f7c9a 763 Pfam PF01568 Molydopterin dinucleotide binding domain 642 752 4.7E-23 T 11-11-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 SHALO_RS01555 ae8e8d651ac92961b203a960c67f7c9a 763 Gene3D G3DSA:3.40.228.10 178 362 1.3E-52 T 11-11-2016 SHALO_RS01555 ae8e8d651ac92961b203a960c67f7c9a 763 SUPERFAMILY SSF50692 634 763 2.28E-28 T 11-11-2016 IPR009010 Aspartate decarboxylase-like domain SHALO_RS01555 ae8e8d651ac92961b203a960c67f7c9a 763 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 45 97 5.0E-13 T 11-11-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS01555 ae8e8d651ac92961b203a960c67f7c9a 763 Pfam PF00384 Molybdopterin oxidoreductase 101 537 4.6E-98 T 11-11-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS01555 ae8e8d651ac92961b203a960c67f7c9a 763 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 5 25 5.5E-4 T 11-11-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal SHALO_RS10725 3347ac1d8707b6e0c307c57556ca9641 179 Gene3D G3DSA:3.30.70.20 8 82 3.3E-18 T 11-11-2016 SHALO_RS10725 3347ac1d8707b6e0c307c57556ca9641 179 Gene3D G3DSA:3.30.70.20 83 122 7.9E-4 T 11-11-2016 SHALO_RS10725 3347ac1d8707b6e0c307c57556ca9641 179 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 75 86 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_RS10725 3347ac1d8707b6e0c307c57556ca9641 179 SUPERFAMILY SSF54862 18 101 1.33E-22 T 11-11-2016 SHALO_RS10725 3347ac1d8707b6e0c307c57556ca9641 179 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_RS10725 3347ac1d8707b6e0c307c57556ca9641 179 Pfam PF12838 4Fe-4S dicluster domain 40 89 6.1E-12 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_RS13875 fb660ccf6d221192ad71f0b489b37eca 140 Pfam PF09335 SNARE associated Golgi protein 32 133 1.4E-13 T 11-11-2016 IPR032816 SNARE associated Golgi protein SHALO_RS00815 2590c0cd853496170d30e2f1c4da16e6 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 7.8E-43 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SHALO_RS00815 2590c0cd853496170d30e2f1c4da16e6 112 SMART SM00938 4 105 3.1E-64 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SHALO_RS00815 2590c0cd853496170d30e2f1c4da16e6 112 PIRSF PIRSF039144 1 112 3.0E-54 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SHALO_RS00815 2590c0cd853496170d30e2f1c4da16e6 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 11-11-2016 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 SHALO_RS00815 2590c0cd853496170d30e2f1c4da16e6 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 11-11-2016 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 SHALO_RS00815 2590c0cd853496170d30e2f1c4da16e6 112 Gene3D G3DSA:3.30.70.120 1 112 2.6E-49 T 11-11-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal SHALO_RS00815 2590c0cd853496170d30e2f1c4da16e6 112 SUPERFAMILY SSF54913 1 112 6.67E-45 T 11-11-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta SHALO_RS00815 2590c0cd853496170d30e2f1c4da16e6 112 PRINTS PR00340 P-II protein signature 52 75 1.8E-41 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SHALO_RS00815 2590c0cd853496170d30e2f1c4da16e6 112 PRINTS PR00340 P-II protein signature 2 17 1.8E-41 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SHALO_RS00815 2590c0cd853496170d30e2f1c4da16e6 112 PRINTS PR00340 P-II protein signature 23 41 1.8E-41 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SHALO_RS00815 2590c0cd853496170d30e2f1c4da16e6 112 PRINTS PR00340 P-II protein signature 83 103 1.8E-41 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SHALO_RS03490 66d1ab91eced49d55805609e89805a81 307 Gene3D G3DSA:3.30.70.250 129 196 2.1E-20 T 11-11-2016 SHALO_RS03490 66d1ab91eced49d55805609e89805a81 307 Pfam PF00698 Acyl transferase domain 5 273 2.4E-34 T 11-11-2016 IPR014043 Acyl transferase SHALO_RS03490 66d1ab91eced49d55805609e89805a81 307 SUPERFAMILY SSF52151 198 294 1.94E-53 T 11-11-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 SHALO_RS03490 66d1ab91eced49d55805609e89805a81 307 SUPERFAMILY SSF52151 5 127 1.94E-53 T 11-11-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 SHALO_RS03490 66d1ab91eced49d55805609e89805a81 307 PIRSF PIRSF000446 1 307 5.1E-79 T 11-11-2016 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 SHALO_RS03490 66d1ab91eced49d55805609e89805a81 307 SUPERFAMILY SSF55048 129 193 6.67E-13 T 11-11-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 SHALO_RS03490 66d1ab91eced49d55805609e89805a81 307 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 5 288 2.4E-95 T 11-11-2016 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 SHALO_RS03490 66d1ab91eced49d55805609e89805a81 307 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 299 2.9E-16 T 11-11-2016 IPR020801 Polyketide synthase, acyl transferase domain SHALO_RS03490 66d1ab91eced49d55805609e89805a81 307 Gene3D G3DSA:3.40.366.10 197 294 2.9E-54 T 11-11-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 SHALO_RS03490 66d1ab91eced49d55805609e89805a81 307 Gene3D G3DSA:3.40.366.10 2 121 2.9E-54 T 11-11-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 SHALO_RS06545 20829bc2839cc8ae80a529d023a0fbc7 187 Pfam PF01966 HD domain 21 86 8.7E-5 T 11-11-2016 IPR006674 HD domain SHALO_RS06545 20829bc2839cc8ae80a529d023a0fbc7 187 TIGRFAM TIGR00277 HDIG: HDIG domain 20 86 4.8E-8 T 11-11-2016 IPR006675 HDIG domain SHALO_RS06545 20829bc2839cc8ae80a529d023a0fbc7 187 Gene3D G3DSA:1.10.3210.10 1 152 2.1E-31 T 11-11-2016 IPR006674 HD domain SHALO_RS06545 20829bc2839cc8ae80a529d023a0fbc7 187 SUPERFAMILY SSF109604 5 151 5.5E-16 T 11-11-2016 SHALO_RS06715 9dfa9021e9f7c8a53add06e526cf4bdb 356 Pfam PF01966 HD domain 27 148 1.9E-18 T 11-11-2016 IPR006674 HD domain SHALO_RS06715 9dfa9021e9f7c8a53add06e526cf4bdb 356 SUPERFAMILY SSF109604 16 186 5.11E-40 T 11-11-2016 SHALO_RS06715 9dfa9021e9f7c8a53add06e526cf4bdb 356 Gene3D G3DSA:1.10.3210.10 22 186 1.9E-23 T 11-11-2016 IPR006674 HD domain SHALO_RS06715 9dfa9021e9f7c8a53add06e526cf4bdb 356 Pfam PF00990 Diguanylate cyclase, GGDEF domain 227 295 6.0E-7 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS06715 9dfa9021e9f7c8a53add06e526cf4bdb 356 SUPERFAMILY SSF55073 224 297 7.38E-9 T 11-11-2016 IPR029787 Nucleotide cyclase SHALO_RS06715 9dfa9021e9f7c8a53add06e526cf4bdb 356 TIGRFAM TIGR00277 HDIG: HDIG domain 27 115 3.8E-8 T 11-11-2016 IPR006675 HDIG domain SHALO_RS06715 9dfa9021e9f7c8a53add06e526cf4bdb 356 Gene3D G3DSA:3.30.70.270 215 297 1.2E-9 T 11-11-2016 SHALO_RS06715 9dfa9021e9f7c8a53add06e526cf4bdb 356 SMART SM00471 22 157 2.5E-12 T 11-11-2016 IPR003607 HD/PDEase domain SHALO_RS06240 8f687911b90ddc6176bb7486af3074c2 89 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 4 88 1.0E-19 T 11-11-2016 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family SHALO_RS06240 8f687911b90ddc6176bb7486af3074c2 89 PIRSF PIRSF006156 1 89 1.3E-19 T 11-11-2016 IPR004386 Toxin-antitoxin system, YafQ-like toxin SHALO_RS06240 8f687911b90ddc6176bb7486af3074c2 89 SUPERFAMILY SSF143011 3 88 1.14E-22 T 11-11-2016 SHALO_RS06240 8f687911b90ddc6176bb7486af3074c2 89 Pfam PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ 3 88 3.1E-27 T 11-11-2016 IPR004386 Toxin-antitoxin system, YafQ-like toxin SHALO_RS14710 08954b406ceca877c4de67711833c39b 690 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 4 604 7.6E-241 T 11-11-2016 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 SHALO_RS14710 08954b406ceca877c4de67711833c39b 690 SUPERFAMILY SSF56712 2 581 7.72E-180 T 11-11-2016 IPR023405 DNA topoisomerase, type IA, core domain SHALO_RS14710 08954b406ceca877c4de67711833c39b 690 SUPERFAMILY SSF57783 563 609 1.87E-11 T 11-11-2016 SHALO_RS14710 08954b406ceca877c4de67711833c39b 690 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 621 656 2.0E-13 T 11-11-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 SHALO_RS14710 08954b406ceca877c4de67711833c39b 690 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 569 606 4.2E-15 T 11-11-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 SHALO_RS14710 08954b406ceca877c4de67711833c39b 690 SUPERFAMILY SSF57783 617 652 2.04E-8 T 11-11-2016 SHALO_RS14710 08954b406ceca877c4de67711833c39b 690 SMART SM00437 242 504 1.6E-112 T 11-11-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 SHALO_RS14710 08954b406ceca877c4de67711833c39b 690 Pfam PF01131 DNA topoisomerase 130 541 4.7E-123 T 11-11-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 SHALO_RS14710 08954b406ceca877c4de67711833c39b 690 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 77 90 1.2E-33 T 11-11-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SHALO_RS14710 08954b406ceca877c4de67711833c39b 690 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 162 180 1.2E-33 T 11-11-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SHALO_RS14710 08954b406ceca877c4de67711833c39b 690 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 292 301 1.2E-33 T 11-11-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SHALO_RS14710 08954b406ceca877c4de67711833c39b 690 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 467 481 1.2E-33 T 11-11-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SHALO_RS14710 08954b406ceca877c4de67711833c39b 690 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 370 386 1.2E-33 T 11-11-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SHALO_RS14710 08954b406ceca877c4de67711833c39b 690 Gene3D G3DSA:3.40.50.140 2 128 1.7E-44 T 11-11-2016 IPR006171 Toprim domain SHALO_RS14710 08954b406ceca877c4de67711833c39b 690 SMART SM00436 104 192 4.6E-43 T 11-11-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 SHALO_RS14710 08954b406ceca877c4de67711833c39b 690 Hamap MF_00952 DNA topoisomerase 1 [topA]. 2 674 52.425 T 11-11-2016 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 SHALO_RS14710 08954b406ceca877c4de67711833c39b 690 Gene3D G3DSA:3.30.65.10 557 606 1.4E-14 T 11-11-2016 SHALO_RS14710 08954b406ceca877c4de67711833c39b 690 Gene3D G3DSA:3.30.65.10 619 654 2.5E-7 T 11-11-2016 SHALO_RS14710 08954b406ceca877c4de67711833c39b 690 SMART SM00493 2 103 4.6E-30 T 11-11-2016 IPR006171 Toprim domain SHALO_RS14710 08954b406ceca877c4de67711833c39b 690 Gene3D G3DSA:2.70.20.10 184 314 1.6E-26 T 11-11-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 SHALO_RS14710 08954b406ceca877c4de67711833c39b 690 Gene3D G3DSA:2.70.20.10 317 450 2.9E-35 T 11-11-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 SHALO_RS14710 08954b406ceca877c4de67711833c39b 690 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 279 301 - T 11-11-2016 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 SHALO_RS14710 08954b406ceca877c4de67711833c39b 690 Pfam PF01751 Toprim domain 4 113 6.0E-29 T 11-11-2016 IPR006171 Toprim domain SHALO_RS14710 08954b406ceca877c4de67711833c39b 690 Gene3D G3DSA:1.10.460.10 135 182 3.0E-56 T 11-11-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 SHALO_RS14710 08954b406ceca877c4de67711833c39b 690 Gene3D G3DSA:1.10.460.10 451 555 3.0E-56 T 11-11-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 SHALO_RS07565 c207fadff22aa2f98b82a9e4e7da7117 608 SMART SM00387 503 608 8.0E-9 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS07565 c207fadff22aa2f98b82a9e4e7da7117 608 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 506 608 1.7E-12 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS07565 c207fadff22aa2f98b82a9e4e7da7117 608 Gene3D G3DSA:3.30.565.10 464 608 2.7E-25 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS07565 c207fadff22aa2f98b82a9e4e7da7117 608 PRINTS PR00344 Bacterial sensor protein C-terminal signature 540 554 1.6E-7 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS07565 c207fadff22aa2f98b82a9e4e7da7117 608 PRINTS PR00344 Bacterial sensor protein C-terminal signature 595 608 1.6E-7 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS07565 c207fadff22aa2f98b82a9e4e7da7117 608 PRINTS PR00344 Bacterial sensor protein C-terminal signature 558 568 1.6E-7 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS07565 c207fadff22aa2f98b82a9e4e7da7117 608 PRINTS PR00344 Bacterial sensor protein C-terminal signature 571 589 1.6E-7 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS07565 c207fadff22aa2f98b82a9e4e7da7117 608 SUPERFAMILY SSF55874 461 608 1.83E-23 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS07565 c207fadff22aa2f98b82a9e4e7da7117 608 Gene3D G3DSA:1.10.287.130 393 457 4.9E-5 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS07565 c207fadff22aa2f98b82a9e4e7da7117 608 Pfam PF07695 7TM diverse intracellular signalling 169 366 5.6E-13 T 11-11-2016 IPR011623 7TM-DISM receptor, extracellular domain, type 1 SHALO_RS07565 c207fadff22aa2f98b82a9e4e7da7117 608 SUPERFAMILY SSF47384 389 459 1.02E-7 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS11265 70fa20d3308304204c0f523fefc74261 191 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 187 37.762 T 11-11-2016 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 SHALO_RS11265 70fa20d3308304204c0f523fefc74261 191 TIGRFAM TIGR00441 gmhA: phosphoheptose isomerase 34 183 7.8E-68 T 11-11-2016 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 SHALO_RS11265 70fa20d3308304204c0f523fefc74261 191 Pfam PF13580 SIS domain 10 144 5.3E-30 T 11-11-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 SHALO_RS11265 70fa20d3308304204c0f523fefc74261 191 Gene3D G3DSA:3.40.50.10490 2 187 3.2E-62 T 11-11-2016 SHALO_RS11265 70fa20d3308304204c0f523fefc74261 191 SUPERFAMILY SSF53697 1 185 2.43E-56 T 11-11-2016 SHALO_RS09305 91944d9931aa5205645292f33deda3f5 148 Pfam PF09719 Putative redox-active protein (C_GCAxxG_C_C) 16 136 2.1E-23 T 11-11-2016 IPR010181 CGCAxxGCC motif SHALO_RS09700 9045fd94ebfc342d99e37e90495e924b 645 Pfam PF13426 PAS domain 364 467 4.6E-18 T 11-11-2016 IPR000014 PAS domain SHALO_RS09700 9045fd94ebfc342d99e37e90495e924b 645 SUPERFAMILY SSF103190 80 189 7.3E-7 T 11-11-2016 IPR029151 Periplasmic sensor domain-like SHALO_RS09700 9045fd94ebfc342d99e37e90495e924b 645 SMART SM00267 468 645 3.5E-42 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS09700 9045fd94ebfc342d99e37e90495e924b 645 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 353 473 9.7E-20 T 11-11-2016 IPR000014 PAS domain SHALO_RS09700 9045fd94ebfc342d99e37e90495e924b 645 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 475 643 6.0E-38 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS09700 9045fd94ebfc342d99e37e90495e924b 645 Gene3D G3DSA:3.30.450.20 351 466 2.6E-25 T 11-11-2016 SHALO_RS09700 9045fd94ebfc342d99e37e90495e924b 645 SMART SM00091 353 419 1.4E-7 T 11-11-2016 IPR000014 PAS domain SHALO_RS09700 9045fd94ebfc342d99e37e90495e924b 645 Pfam PF14827 Double sensory domain of two-component sensor kinase 101 183 3.9E-10 T 11-11-2016 IPR029150 Double Cache domain 3 SHALO_RS09700 9045fd94ebfc342d99e37e90495e924b 645 SUPERFAMILY SSF55785 365 475 1.77E-22 T 11-11-2016 IPR000014 PAS domain SHALO_RS09700 9045fd94ebfc342d99e37e90495e924b 645 Pfam PF00990 Diguanylate cyclase, GGDEF domain 479 640 3.6E-41 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS09700 9045fd94ebfc342d99e37e90495e924b 645 SUPERFAMILY SSF55073 484 642 1.49E-38 T 11-11-2016 IPR029787 Nucleotide cyclase SHALO_RS09700 9045fd94ebfc342d99e37e90495e924b 645 Gene3D G3DSA:3.30.70.270 480 644 2.5E-45 T 11-11-2016 SHALO_RS10015 a25f0e12242369235f3a6ceb0648bdba 989 SUPERFAMILY SSF52540 27 260 1.18E-38 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS10015 a25f0e12242369235f3a6ceb0648bdba 989 Gene3D G3DSA:3.40.50.300 658 835 3.5E-28 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS10015 a25f0e12242369235f3a6ceb0648bdba 989 Gene3D G3DSA:3.40.50.300 467 657 5.3E-50 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS10015 a25f0e12242369235f3a6ceb0648bdba 989 Pfam PF00271 Helicase conserved C-terminal domain 676 781 2.6E-15 T 11-11-2016 IPR001650 Helicase, C-terminal SHALO_RS10015 a25f0e12242369235f3a6ceb0648bdba 989 Gene3D G3DSA:3.30.2060.10 103 177 2.8E-8 T 11-11-2016 SHALO_RS10015 a25f0e12242369235f3a6ceb0648bdba 989 SMART SM00487 474 661 2.2E-27 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SHALO_RS10015 a25f0e12242369235f3a6ceb0648bdba 989 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 13 984 24.01 T 11-11-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 SHALO_RS10015 a25f0e12242369235f3a6ceb0648bdba 989 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 311 946 2.2E-251 T 11-11-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 SHALO_RS10015 a25f0e12242369235f3a6ceb0648bdba 989 SUPERFAMILY SSF141259 351 422 1.01E-19 T 11-11-2016 IPR003711 CarD-like/TRCF domain SHALO_RS10015 a25f0e12242369235f3a6ceb0648bdba 989 SMART SM00982 875 975 3.7E-32 T 11-11-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 SHALO_RS10015 a25f0e12242369235f3a6ceb0648bdba 989 SMART SM01058 353 450 2.1E-38 T 11-11-2016 IPR003711 CarD-like/TRCF domain SHALO_RS10015 a25f0e12242369235f3a6ceb0648bdba 989 Pfam PF00270 DEAD/DEAH box helicase 479 636 3.1E-15 T 11-11-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SHALO_RS10015 a25f0e12242369235f3a6ceb0648bdba 989 SUPERFAMILY SSF143517 867 966 3.14E-26 T 11-11-2016 SHALO_RS10015 a25f0e12242369235f3a6ceb0648bdba 989 SUPERFAMILY SSF52540 398 655 9.23E-50 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS10015 a25f0e12242369235f3a6ceb0648bdba 989 Pfam PF03461 TRCF domain 876 967 4.6E-21 T 11-11-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 SHALO_RS10015 a25f0e12242369235f3a6ceb0648bdba 989 SUPERFAMILY SSF52540 654 859 2.09E-41 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS10015 a25f0e12242369235f3a6ceb0648bdba 989 Pfam PF02559 CarD-like/TRCF domain 354 447 3.7E-21 T 11-11-2016 IPR003711 CarD-like/TRCF domain SHALO_RS10015 a25f0e12242369235f3a6ceb0648bdba 989 SMART SM00490 699 782 4.4E-13 T 11-11-2016 IPR001650 Helicase, C-terminal SHALO_RS08815 92acb0d84b830aa9e900ee111e19cd06 400 Pfam PF13941 MutL protein 35 297 1.1E-25 T 11-11-2016 IPR006230 Protein MutL SHALO_RS13830 af30d857445d5e46c52d83cd56a93683 249 Gene3D G3DSA:3.40.50.720 3 248 3.9E-61 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS13830 af30d857445d5e46c52d83cd56a93683 249 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 246 1.7E-47 T 11-11-2016 SHALO_RS13830 af30d857445d5e46c52d83cd56a93683 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 5.0E-25 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_RS13830 af30d857445d5e46c52d83cd56a93683 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 5.0E-25 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_RS13830 af30d857445d5e46c52d83cd56a93683 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 5.0E-25 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_RS13830 af30d857445d5e46c52d83cd56a93683 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 5.0E-25 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_RS13830 af30d857445d5e46c52d83cd56a93683 249 SUPERFAMILY SSF51735 8 248 5.75E-63 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS03330 5b6ab8fc368bb1196ae48ddabc1e2044 370 Pfam PF01546 Peptidase family M20/M25/M40 61 364 8.2E-36 T 11-11-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 SHALO_RS03330 5b6ab8fc368bb1196ae48ddabc1e2044 370 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 2 367 42.813 T 11-11-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 SHALO_RS03330 5b6ab8fc368bb1196ae48ddabc1e2044 370 SUPERFAMILY SSF53187 5 171 1.76E-53 T 11-11-2016 SHALO_RS03330 5b6ab8fc368bb1196ae48ddabc1e2044 370 SUPERFAMILY SSF53187 284 365 1.76E-53 T 11-11-2016 SHALO_RS03330 5b6ab8fc368bb1196ae48ddabc1e2044 370 Gene3D G3DSA:3.30.70.360 181 271 6.3E-24 T 11-11-2016 IPR011650 Peptidase M20, dimerisation domain SHALO_RS03330 5b6ab8fc368bb1196ae48ddabc1e2044 370 SUPERFAMILY SSF55031 172 272 8.37E-22 T 11-11-2016 IPR011650 Peptidase M20, dimerisation domain SHALO_RS03330 5b6ab8fc368bb1196ae48ddabc1e2044 370 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 6 365 8.8E-126 T 11-11-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 SHALO_RS03330 5b6ab8fc368bb1196ae48ddabc1e2044 370 Gene3D G3DSA:3.40.630.10 6 180 5.4E-62 T 11-11-2016 SHALO_RS03330 5b6ab8fc368bb1196ae48ddabc1e2044 370 Gene3D G3DSA:3.40.630.10 308 366 5.4E-62 T 11-11-2016 SHALO_RS03330 5b6ab8fc368bb1196ae48ddabc1e2044 370 Pfam PF07687 Peptidase dimerisation domain 168 269 4.5E-17 T 11-11-2016 IPR011650 Peptidase M20, dimerisation domain SHALO_RS12825 b9dfb6a25586142e6937f5a3d73fa7b0 271 Pfam PF01370 NAD dependent epimerase/dehydratase family 30 189 7.8E-11 T 11-11-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 SHALO_RS12825 b9dfb6a25586142e6937f5a3d73fa7b0 271 Gene3D G3DSA:3.40.50.720 30 218 2.1E-20 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS12825 b9dfb6a25586142e6937f5a3d73fa7b0 271 Pfam PF08338 Domain of unknown function (DUF1731) 223 269 1.7E-15 T 11-11-2016 IPR013549 Domain of unknown function DUF1731 SHALO_RS12825 b9dfb6a25586142e6937f5a3d73fa7b0 271 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 3 265 2.1E-75 T 11-11-2016 IPR010099 Epimerase family protein SDR39U1 SHALO_RS12825 b9dfb6a25586142e6937f5a3d73fa7b0 271 SUPERFAMILY SSF51735 1 269 2.14E-31 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS02425 2d2d1f4ae9996ddb9b980d913976459e 160 SUPERFAMILY SSF160369 2 155 1.83E-39 T 11-11-2016 SHALO_RS02425 2d2d1f4ae9996ddb9b980d913976459e 160 ProSitePatterns PS01109 Ribosomal protein L10 signature. 6 40 - T 11-11-2016 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_RS02425 2d2d1f4ae9996ddb9b980d913976459e 160 Pfam PF00466 Ribosomal protein L10 2 96 1.2E-18 T 11-11-2016 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 SHALO_RS02425 2d2d1f4ae9996ddb9b980d913976459e 160 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 1 156 22.147 T 11-11-2016 IPR022973 Ribosomal protein L10 SHALO_RS06735 00a4c071179bfee4ed07cd5a20e14c94 610 SMART SM00382 26 193 7.3E-11 T 11-11-2016 IPR003593 AAA+ ATPase domain SHALO_RS06735 00a4c071179bfee4ed07cd5a20e14c94 610 SMART SM00382 308 475 9.9E-8 T 11-11-2016 IPR003593 AAA+ ATPase domain SHALO_RS06735 00a4c071179bfee4ed07cd5a20e14c94 610 Gene3D G3DSA:3.40.50.300 1 236 1.9E-45 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS06735 00a4c071179bfee4ed07cd5a20e14c94 610 Gene3D G3DSA:3.40.50.300 281 504 3.8E-40 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS06735 00a4c071179bfee4ed07cd5a20e14c94 610 ProSitePatterns PS00211 ABC transporters family signature. 402 416 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHALO_RS06735 00a4c071179bfee4ed07cd5a20e14c94 610 SUPERFAMILY SSF52540 267 485 2.62E-40 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS06735 00a4c071179bfee4ed07cd5a20e14c94 610 SUPERFAMILY SSF52540 2 200 1.22E-43 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS06735 00a4c071179bfee4ed07cd5a20e14c94 610 Pfam PF00005 ABC transporter 18 148 8.1E-22 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_RS06735 00a4c071179bfee4ed07cd5a20e14c94 610 Pfam PF00005 ABC transporter 300 430 5.6E-21 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_RS06735 00a4c071179bfee4ed07cd5a20e14c94 610 Pfam PF12848 ABC transporter 189 270 7.8E-14 T 11-11-2016 IPR032781 ABC-transporter extension domain SHALO_RS09060 c8c51937443bb8ef0bb1f9a2287df4f7 420 SUPERFAMILY SSF81442 25 144 1.7E-9 T 11-11-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_RS14495 269911e42dbe367a9098c463ad0f7538 265 Gene3D G3DSA:3.40.190.10 105 227 1.3E-31 T 11-11-2016 SHALO_RS14495 269911e42dbe367a9098c463ad0f7538 265 Gene3D G3DSA:3.40.190.10 23 104 6.6E-4 T 11-11-2016 SHALO_RS14495 269911e42dbe367a9098c463ad0f7538 265 Pfam PF12849 PBP superfamily domain 18 252 4.3E-30 T 11-11-2016 IPR024370 PBP domain SHALO_RS14495 269911e42dbe367a9098c463ad0f7538 265 SUPERFAMILY SSF53850 19 259 1.06E-47 T 11-11-2016 SHALO_RS11650 f9d925a9da1636ce8675b70a669daa3b 269 Gene3D G3DSA:2.30.30.60 119 168 6.0E-17 T 11-11-2016 SHALO_RS11650 f9d925a9da1636ce8675b70a669daa3b 269 SUPERFAMILY SSF82689 172 262 1.44E-21 T 11-11-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 SHALO_RS11650 f9d925a9da1636ce8675b70a669daa3b 269 SUPERFAMILY SSF50182 104 169 1.73E-16 T 11-11-2016 IPR010920 LSM domain SHALO_RS11650 f9d925a9da1636ce8675b70a669daa3b 269 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 133 167 - T 11-11-2016 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 SHALO_RS11650 f9d925a9da1636ce8675b70a669daa3b 269 Pfam PF00924 Mechanosensitive ion channel 61 258 1.5E-50 T 11-11-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 SHALO_RS11650 f9d925a9da1636ce8675b70a669daa3b 269 SUPERFAMILY SSF82861 18 102 2.09E-17 T 11-11-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 SHALO_RS11650 f9d925a9da1636ce8675b70a669daa3b 269 Gene3D G3DSA:3.30.70.100 172 256 8.6E-22 T 11-11-2016 SHALO_RS09980 a74ff0a202eb32496377cd9e98dc9e1d 195 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 3 191 3.7E-38 T 11-11-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 SHALO_RS09980 a74ff0a202eb32496377cd9e98dc9e1d 195 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 1 195 34.601 T 11-11-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 SHALO_RS09980 a74ff0a202eb32496377cd9e98dc9e1d 195 SUPERFAMILY SSF51366 1 193 3.45E-51 T 11-11-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 SHALO_RS09980 a74ff0a202eb32496377cd9e98dc9e1d 195 Gene3D G3DSA:3.20.20.70 1 194 9.6E-60 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_RS10255 fa7871c13a9117064b24ed1cedcc7be9 164 Pfam PF00731 AIR carboxylase 4 146 1.8E-56 T 11-11-2016 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 SHALO_RS10255 fa7871c13a9117064b24ed1cedcc7be9 164 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 4 158 8.1E-57 T 11-11-2016 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 SHALO_RS10255 fa7871c13a9117064b24ed1cedcc7be9 164 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 4 157 29.763 T 11-11-2016 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 SHALO_RS10255 fa7871c13a9117064b24ed1cedcc7be9 164 PIRSF PIRSF001338 1 163 7.0E-61 T 11-11-2016 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 SHALO_RS10255 fa7871c13a9117064b24ed1cedcc7be9 164 SUPERFAMILY SSF52255 3 157 8.63E-59 T 11-11-2016 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 SHALO_RS10255 fa7871c13a9117064b24ed1cedcc7be9 164 SMART SM01001 2 153 1.6E-89 T 11-11-2016 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 SHALO_RS10255 fa7871c13a9117064b24ed1cedcc7be9 164 Gene3D G3DSA:3.40.50.7700 4 158 3.1E-62 T 11-11-2016 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 SHALO_RS12280 474818e51a955ce789f0149ba1daefa5 220 SMART SM00382 29 213 3.0E-9 T 11-11-2016 IPR003593 AAA+ ATPase domain SHALO_RS12280 474818e51a955ce789f0149ba1daefa5 220 Gene3D G3DSA:3.40.50.300 2 217 8.9E-68 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS12280 474818e51a955ce789f0149ba1daefa5 220 SUPERFAMILY SSF52540 3 216 1.41E-63 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS12280 474818e51a955ce789f0149ba1daefa5 220 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHALO_RS12280 474818e51a955ce789f0149ba1daefa5 220 Pfam PF00005 ABC transporter 20 165 1.2E-32 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_RS04980 0c4ef6641b2dce339c9af2a79c4821d8 275 Gene3D G3DSA:2.40.160.10 121 275 3.9E-4 T 11-11-2016 IPR023614 Porin domain SHALO_RS04980 0c4ef6641b2dce339c9af2a79c4821d8 275 Pfam PF06629 MltA-interacting protein MipA 55 275 1.2E-41 T 11-11-2016 IPR010583 MltA-interacting MipA SHALO_RS10830 4681a7761e97d275f79ad96fa52d9d81 273 SUPERFAMILY SSF51690 98 267 9.42E-40 T 11-11-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 SHALO_RS10830 4681a7761e97d275f79ad96fa52d9d81 273 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 10 96 2.8E-18 T 11-11-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 SHALO_RS10830 4681a7761e97d275f79ad96fa52d9d81 273 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 98 267 5.4E-33 T 11-11-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 SHALO_RS10830 4681a7761e97d275f79ad96fa52d9d81 273 Gene3D G3DSA:3.20.20.70 121 259 6.7E-36 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_RS10830 4681a7761e97d275f79ad96fa52d9d81 273 Gene3D G3DSA:3.90.1170.20 3 120 6.1E-26 T 11-11-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 SHALO_RS10830 4681a7761e97d275f79ad96fa52d9d81 273 SUPERFAMILY SSF54675 3 97 1.81E-18 T 11-11-2016 SHALO_RS10830 4681a7761e97d275f79ad96fa52d9d81 273 TIGRFAM TIGR01334 modD: modD protein 3 269 4.2E-71 T 11-11-2016 IPR006242 Putative pyrophosphorylase ModD GO:0016763 SHALO_RS10830 4681a7761e97d275f79ad96fa52d9d81 273 PIRSF PIRSF006250 1 272 7.8E-64 T 11-11-2016 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 SHALO_RS03475 dde505e496e298b4fb1bc0f1635e58d2 309 SMART SM00028 232 265 0.35 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SHALO_RS03475 dde505e496e298b4fb1bc0f1635e58d2 309 SMART SM00028 269 302 140.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SHALO_RS03475 dde505e496e298b4fb1bc0f1635e58d2 309 SMART SM00028 198 231 370.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SHALO_RS03475 dde505e496e298b4fb1bc0f1635e58d2 309 Pfam PF13432 Tetratricopeptide repeat 203 258 6.4E-7 T 11-11-2016 SHALO_RS03475 dde505e496e298b4fb1bc0f1635e58d2 309 Gene3D G3DSA:1.25.40.10 193 306 6.6E-15 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SHALO_RS03475 dde505e496e298b4fb1bc0f1635e58d2 309 Pfam PF13174 Tetratricopeptide repeat 272 302 1.3E-4 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SHALO_RS03475 dde505e496e298b4fb1bc0f1635e58d2 309 SUPERFAMILY SSF48452 192 306 2.4E-14 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SHALO_RS04450 95038dd5ecb27f3760154d5c752971a1 395 SUPERFAMILY SSF48163 239 385 1.83E-13 T 11-11-2016 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 SHALO_RS04450 95038dd5ecb27f3760154d5c752971a1 395 Gene3D G3DSA:1.10.1160.10 205 274 3.7E-19 T 11-11-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 SHALO_RS04450 95038dd5ecb27f3760154d5c752971a1 395 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 134 264 3.7E-14 T 11-11-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 SHALO_RS04450 95038dd5ecb27f3760154d5c752971a1 395 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 3 100 1.9E-20 T 11-11-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 SHALO_RS04450 95038dd5ecb27f3760154d5c752971a1 395 PRINTS PR00987 Glutamyl-tRNA synthetase signature 3 15 1.7E-6 T 11-11-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 SHALO_RS04450 95038dd5ecb27f3760154d5c752971a1 395 PRINTS PR00987 Glutamyl-tRNA synthetase signature 17 28 1.7E-6 T 11-11-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 SHALO_RS04450 95038dd5ecb27f3760154d5c752971a1 395 PRINTS PR00987 Glutamyl-tRNA synthetase signature 32 45 1.7E-6 T 11-11-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 SHALO_RS04450 95038dd5ecb27f3760154d5c752971a1 395 Gene3D G3DSA:3.40.50.620 149 199 7.2E-26 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHALO_RS04450 95038dd5ecb27f3760154d5c752971a1 395 Gene3D G3DSA:3.40.50.620 2 65 7.2E-26 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHALO_RS04450 95038dd5ecb27f3760154d5c752971a1 395 SUPERFAMILY SSF52374 2 256 2.38E-48 T 11-11-2016 SHALO_RS04450 95038dd5ecb27f3760154d5c752971a1 395 Gene3D G3DSA:3.90.800.10 66 129 1.6E-5 T 11-11-2016 SHALO_RS07985 afcf7e2f6ad486ed4655808ed83e2971 262 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 1 260 34.145 T 11-11-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 SHALO_RS07985 afcf7e2f6ad486ed4655808ed83e2971 262 Hamap MF_00134_A Indole-3-glycerol phosphate synthase [trpC]. 33 256 30.431 T 11-11-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 SHALO_RS07985 afcf7e2f6ad486ed4655808ed83e2971 262 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 54 72 - T 11-11-2016 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 SHALO_RS07985 afcf7e2f6ad486ed4655808ed83e2971 262 SUPERFAMILY SSF51366 11 259 1.01E-83 T 11-11-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 SHALO_RS07985 afcf7e2f6ad486ed4655808ed83e2971 262 Pfam PF00218 Indole-3-glycerol phosphate synthase 3 257 1.3E-87 T 11-11-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 SHALO_RS07985 afcf7e2f6ad486ed4655808ed83e2971 262 Gene3D G3DSA:3.20.20.70 1 259 1.1E-97 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_RS07405 584fd16f31390785ac8cdd800e80d409 409 TIGRFAM TIGR00032 argG: argininosuccinate synthase 7 397 2.5E-142 T 11-11-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 SHALO_RS07405 584fd16f31390785ac8cdd800e80d409 409 Gene3D G3DSA:3.40.50.620 6 176 8.3E-64 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHALO_RS07405 584fd16f31390785ac8cdd800e80d409 409 Gene3D G3DSA:3.90.1260.10 180 407 7.1E-102 T 11-11-2016 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 SHALO_RS07405 584fd16f31390785ac8cdd800e80d409 409 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 121 132 - T 11-11-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 SHALO_RS07405 584fd16f31390785ac8cdd800e80d409 409 Hamap MF_00005 Argininosuccinate synthase [argG]. 5 404 50.358 T 11-11-2016 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 SHALO_RS07405 584fd16f31390785ac8cdd800e80d409 409 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 11 19 - T 11-11-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 SHALO_RS07405 584fd16f31390785ac8cdd800e80d409 409 SUPERFAMILY SSF52402 6 211 2.65E-44 T 11-11-2016 SHALO_RS07405 584fd16f31390785ac8cdd800e80d409 409 Pfam PF00764 Arginosuccinate synthase 9 396 1.7E-151 T 11-11-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 SHALO_RS07405 584fd16f31390785ac8cdd800e80d409 409 SUPERFAMILY SSF69864 177 405 5.1E-94 T 11-11-2016 SHALO_RS09540 7cf89d740906b24f6a9d16a9f8a0127e 159 Pfam PF00588 SpoU rRNA Methylase family 2 143 1.8E-31 T 11-11-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 SHALO_RS09540 7cf89d740906b24f6a9d16a9f8a0127e 159 SUPERFAMILY SSF75217 1 149 1.05E-36 T 11-11-2016 IPR029028 Alpha/beta knot methyltransferases SHALO_RS09540 7cf89d740906b24f6a9d16a9f8a0127e 159 PIRSF PIRSF029256 1 154 1.1E-56 T 11-11-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 SHALO_RS09540 7cf89d740906b24f6a9d16a9f8a0127e 159 Gene3D G3DSA:3.40.1280.10 1 152 8.4E-54 T 11-11-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SHALO_RS09540 7cf89d740906b24f6a9d16a9f8a0127e 159 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 152 30.32 T 11-11-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 SHALO_RS11325 ce6f94c3758be6a3bb1ab8afda3fe12a 224 SUPERFAMILY SSF64438 2 224 1.83E-70 T 11-11-2016 IPR011324 Cytotoxic necrotizing factor-like, catalytic SHALO_RS11325 ce6f94c3758be6a3bb1ab8afda3fe12a 224 Gene3D G3DSA:3.60.140.10 2 224 1.8E-74 T 11-11-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase SHALO_RS11325 ce6f94c3758be6a3bb1ab8afda3fe12a 224 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 6 222 2.3E-70 T 11-11-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase SHALO_RS11325 ce6f94c3758be6a3bb1ab8afda3fe12a 224 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 11 223 1.9E-52 T 11-11-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase SHALO_RS06675 dc7a448889b9bd045bbaccd374ea54b6 200 SMART SM00267 32 198 3.2E-53 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS06675 dc7a448889b9bd045bbaccd374ea54b6 200 Gene3D G3DSA:3.30.70.270 45 198 1.3E-47 T 11-11-2016 SHALO_RS06675 dc7a448889b9bd045bbaccd374ea54b6 200 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 39 196 1.2E-44 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS06675 dc7a448889b9bd045bbaccd374ea54b6 200 Pfam PF00990 Diguanylate cyclase, GGDEF domain 44 194 1.2E-43 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS06675 dc7a448889b9bd045bbaccd374ea54b6 200 SUPERFAMILY SSF55073 48 199 5.89E-46 T 11-11-2016 IPR029787 Nucleotide cyclase SHALO_RS01450 414b6b566938a1a165608fac08f6435a 314 SUPERFAMILY SSF64182 13 307 1.03E-57 T 11-11-2016 SHALO_RS01450 414b6b566938a1a165608fac08f6435a 314 Pfam PF01368 DHH family 14 150 1.4E-14 T 11-11-2016 IPR001667 DDH domain SHALO_RS01450 414b6b566938a1a165608fac08f6435a 314 Gene3D G3DSA:3.90.1640.10 13 188 1.8E-25 T 11-11-2016 SHALO_RS01450 414b6b566938a1a165608fac08f6435a 314 Pfam PF02272 DHHA1 domain 251 293 6.0E-7 T 11-11-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 SHALO_RS09420 1d50e145ec619e7574e789288193ace5 145 Gene3D G3DSA:3.40.140.10 2 138 2.6E-38 T 11-11-2016 SHALO_RS09420 1d50e145ec619e7574e789288193ace5 145 SUPERFAMILY SSF53927 2 142 1.63E-39 T 11-11-2016 IPR016193 Cytidine deaminase-like GO:0003824 SHALO_RS09420 1d50e145ec619e7574e789288193ace5 145 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 3 97 8.1E-22 T 11-11-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 SHALO_RS03830 016e9691d6f559f11cca89b4b8909590 599 Gene3D G3DSA:3.40.1440.10 12 98 5.8E-10 T 11-11-2016 IPR027299 GIY-YIG domain SHALO_RS03830 016e9691d6f559f11cca89b4b8909590 599 Gene3D G3DSA:1.10.150.20 547 597 2.8E-10 T 11-11-2016 SHALO_RS03830 016e9691d6f559f11cca89b4b8909590 599 SUPERFAMILY SSF47781 513 596 3.5E-13 T 11-11-2016 IPR010994 RuvA domain 2-like SHALO_RS03830 016e9691d6f559f11cca89b4b8909590 599 SMART SM00465 12 100 2.9E-21 T 11-11-2016 IPR000305 GIY-YIG nuclease superfamily SHALO_RS03830 016e9691d6f559f11cca89b4b8909590 599 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 2 580 5.1E-164 T 11-11-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 SHALO_RS03830 016e9691d6f559f11cca89b4b8909590 599 Pfam PF01541 GIY-YIG catalytic domain 13 95 3.6E-9 T 11-11-2016 IPR000305 GIY-YIG nuclease superfamily SHALO_RS03830 016e9691d6f559f11cca89b4b8909590 599 Gene3D G3DSA:4.10.860.10 182 238 5.4E-11 T 11-11-2016 IPR001943 UVR domain GO:0005515 SHALO_RS03830 016e9691d6f559f11cca89b4b8909590 599 Pfam PF14520 Helix-hairpin-helix domain 547 598 3.1E-5 T 11-11-2016 SHALO_RS03830 016e9691d6f559f11cca89b4b8909590 599 Hamap MF_00203 UvrABC system protein C [uvrC]. 1 596 23.3 T 11-11-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 SHALO_RS03830 016e9691d6f559f11cca89b4b8909590 599 Pfam PF02151 UvrB/uvrC motif 211 236 7.9E-7 T 11-11-2016 IPR001943 UVR domain GO:0005515 SHALO_RS03830 016e9691d6f559f11cca89b4b8909590 599 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 380 533 1.0E-38 T 11-11-2016 IPR001162 UvrC family homology region SHALO_RS03830 016e9691d6f559f11cca89b4b8909590 599 SUPERFAMILY SSF46600 199 237 1.03E-7 T 11-11-2016 IPR001943 UVR domain GO:0005515 SHALO_RS03830 016e9691d6f559f11cca89b4b8909590 599 SUPERFAMILY SSF82771 13 102 9.42E-18 T 11-11-2016 IPR000305 GIY-YIG nuclease superfamily SHALO_RS02355 8821ee919b97768a2bcae71185f32763 240 SUPERFAMILY SSF52540 5 235 1.66E-59 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS02355 8821ee919b97768a2bcae71185f32763 240 SMART SM00382 30 215 7.0E-11 T 11-11-2016 IPR003593 AAA+ ATPase domain SHALO_RS02355 8821ee919b97768a2bcae71185f32763 240 PIRSF PIRSF039137 1 237 9.1E-110 T 11-11-2016 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 SHALO_RS02355 8821ee919b97768a2bcae71185f32763 240 Pfam PF00005 ABC transporter 22 164 2.1E-29 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_RS02355 8821ee919b97768a2bcae71185f32763 240 Gene3D G3DSA:3.40.50.300 2 231 5.2E-63 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS02355 8821ee919b97768a2bcae71185f32763 240 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHALO_RS06080 88b1db0e805cd59ddae4491bf3d902aa 311 SUPERFAMILY SSF82282 4 310 1.96E-88 T 11-11-2016 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 SHALO_RS06080 88b1db0e805cd59ddae4491bf3d902aa 311 Pfam PF02574 Homocysteine S-methyltransferase 14 308 3.2E-75 T 11-11-2016 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 SHALO_RS06080 88b1db0e805cd59ddae4491bf3d902aa 311 Gene3D G3DSA:3.20.20.330 1 310 6.3E-99 T 11-11-2016 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 SHALO_RS07685 c7e940cb5c3fd3437f7051b82799c328 242 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 5 208 2.3E-38 T 11-11-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 SHALO_RS07685 c7e940cb5c3fd3437f7051b82799c328 242 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 76 109 - T 11-11-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 SHALO_RS07685 c7e940cb5c3fd3437f7051b82799c328 242 SUPERFAMILY SSF53790 2 241 2.75E-57 T 11-11-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 SHALO_RS07685 c7e940cb5c3fd3437f7051b82799c328 242 TIGRFAM TIGR01466 cobJ_cbiH: precorrin-3B C17-methyltransferase 5 240 1.8E-90 T 11-11-2016 IPR006363 Precorrin-3B C17-methyltransferase domain GO:0008168|GO:0009236 SHALO_RS07685 c7e940cb5c3fd3437f7051b82799c328 242 Gene3D G3DSA:3.40.1010.10 2 113 7.1E-31 T 11-11-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 SHALO_RS07685 c7e940cb5c3fd3437f7051b82799c328 242 Gene3D G3DSA:3.30.950.10 114 226 5.1E-9 T 11-11-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 SHALO_RS14840 fdf58927f0bace7ddfedf555d489cca9 133 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 4 113 1.2E-17 T 11-11-2016 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like SHALO_RS14840 fdf58927f0bace7ddfedf555d489cca9 133 SUPERFAMILY SSF110857 1 105 6.93E-18 T 11-11-2016 IPR013024 Butirosin biosynthesis, BtrG-like SHALO_RS14840 fdf58927f0bace7ddfedf555d489cca9 133 Gene3D G3DSA:3.10.490.10 2 112 2.5E-13 T 11-11-2016 IPR013024 Butirosin biosynthesis, BtrG-like SHALO_RS10485 7ef0972d508f1df28a2ef097b0b601b1 328 Pfam PF04909 Amidohydrolase 4 280 2.0E-19 T 11-11-2016 IPR006680 Amidohydrolase-related GO:0016787 SHALO_RS10485 7ef0972d508f1df28a2ef097b0b601b1 328 Gene3D G3DSA:3.20.20.140 49 275 2.2E-33 T 11-11-2016 SHALO_RS10485 7ef0972d508f1df28a2ef097b0b601b1 328 Gene3D G3DSA:3.20.20.140 1 13 2.2E-33 T 11-11-2016 SHALO_RS10485 7ef0972d508f1df28a2ef097b0b601b1 328 SUPERFAMILY SSF51556 2 287 5.33E-33 T 11-11-2016 IPR032466 Metal-dependent hydrolase SHALO_RS07270 8b4690e14afd06c8a4b5eb99d479d417 471 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 7 470 34.165 T 11-11-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 SHALO_RS07270 8b4690e14afd06c8a4b5eb99d479d417 471 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 66 75 5.8E-27 T 11-11-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 SHALO_RS07270 8b4690e14afd06c8a4b5eb99d479d417 471 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 230 251 5.8E-27 T 11-11-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 SHALO_RS07270 8b4690e14afd06c8a4b5eb99d479d417 471 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 195 213 5.8E-27 T 11-11-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 SHALO_RS07270 8b4690e14afd06c8a4b5eb99d479d417 471 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 30 41 5.8E-27 T 11-11-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 SHALO_RS07270 8b4690e14afd06c8a4b5eb99d479d417 471 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 7 469 1.4E-157 T 11-11-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 SHALO_RS07270 8b4690e14afd06c8a4b5eb99d479d417 471 SUPERFAMILY SSF52374 9 321 1.54E-80 T 11-11-2016 SHALO_RS07270 8b4690e14afd06c8a4b5eb99d479d417 471 SUPERFAMILY SSF47323 324 469 1.31E-29 T 11-11-2016 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 SHALO_RS07270 8b4690e14afd06c8a4b5eb99d479d417 471 Gene3D G3DSA:3.40.50.620 24 312 1.2E-91 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHALO_RS07270 8b4690e14afd06c8a4b5eb99d479d417 471 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 22 321 1.4E-118 T 11-11-2016 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 SHALO_RS07270 8b4690e14afd06c8a4b5eb99d479d417 471 Gene3D G3DSA:1.20.120.640 314 391 2.6E-11 T 11-11-2016 SHALO_RS00770 97266d428564a858f30b490135259c3c 563 Pfam PF00672 HAMP domain 212 281 6.3E-10 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SHALO_RS00770 97266d428564a858f30b490135259c3c 563 SUPERFAMILY SSF58104 254 562 7.72E-58 T 11-11-2016 SHALO_RS00770 97266d428564a858f30b490135259c3c 563 Gene3D G3DSA:1.10.287.950 320 475 2.5E-43 T 11-11-2016 SHALO_RS00770 97266d428564a858f30b490135259c3c 563 Gene3D G3DSA:1.10.287.950 511 555 2.5E-43 T 11-11-2016 SHALO_RS00770 97266d428564a858f30b490135259c3c 563 SMART SM00283 308 562 6.5E-42 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SHALO_RS00770 97266d428564a858f30b490135259c3c 563 Pfam PF08269 Cache domain 33 213 3.5E-39 T 11-11-2016 IPR004010 Double Cache domain 2 SHALO_RS00770 97266d428564a858f30b490135259c3c 563 SMART SM01049 42 138 1.6E-17 T 11-11-2016 IPR033480 Single Cache domain 2 SHALO_RS00770 97266d428564a858f30b490135259c3c 563 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 367 561 3.0E-43 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SHALO_RS00770 97266d428564a858f30b490135259c3c 563 SMART SM00304 232 286 5.3E-9 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SHALO_RS00770 97266d428564a858f30b490135259c3c 563 Gene3D G3DSA:3.30.450.20 38 190 2.0E-37 T 11-11-2016 SHALO_RS05650 1287275793e785e670446a76aaf7f8ba 135 Gene3D G3DSA:3.30.70.60 1 96 1.4E-29 T 11-11-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 SHALO_RS05650 1287275793e785e670446a76aaf7f8ba 135 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 95 19.525 T 11-11-2016 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 SHALO_RS05650 1287275793e785e670446a76aaf7f8ba 135 SUPERFAMILY SSF54995 1 96 2.75E-28 T 11-11-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS05650 1287275793e785e670446a76aaf7f8ba 135 Pfam PF01250 Ribosomal protein S6 3 92 2.4E-24 T 11-11-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS05650 1287275793e785e670446a76aaf7f8ba 135 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 94 3.3E-24 T 11-11-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS00500 5ddc930552819e1b17e7f0bf79015b72 233 SUPERFAMILY SSF53681 1 116 1.13E-33 T 11-11-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 SHALO_RS00500 5ddc930552819e1b17e7f0bf79015b72 233 Gene3D G3DSA:3.40.50.1860 113 217 3.1E-30 T 11-11-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 SHALO_RS00500 5ddc930552819e1b17e7f0bf79015b72 233 Gene3D G3DSA:3.40.50.1860 1 112 2.9E-40 T 11-11-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 SHALO_RS00500 5ddc930552819e1b17e7f0bf79015b72 233 SUPERFAMILY SSF53681 104 216 6.54E-27 T 11-11-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 SHALO_RS00500 5ddc930552819e1b17e7f0bf79015b72 233 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 194 204 - T 11-11-2016 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 SHALO_RS00500 5ddc930552819e1b17e7f0bf79015b72 233 Pfam PF01177 Asp/Glu/Hydantoin racemase 7 225 1.4E-55 T 11-11-2016 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 SHALO_RS00500 5ddc930552819e1b17e7f0bf79015b72 233 TIGRFAM TIGR00035 asp_race: aspartate racemase 1 231 1.2E-61 T 11-11-2016 IPR004380 Aspartate racemase GO:0006520|GO:0016855 SHALO_RS07490 3380998100d25bcebf06746c4d64110d 229 Gene3D G3DSA:1.10.10.10 140 226 7.7E-9 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS07490 3380998100d25bcebf06746c4d64110d 229 Pfam PF00072 Response regulator receiver domain 14 123 8.3E-24 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS07490 3380998100d25bcebf06746c4d64110d 229 SMART SM00448 12 123 3.4E-24 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS07490 3380998100d25bcebf06746c4d64110d 229 Gene3D G3DSA:3.40.50.2300 12 131 5.6E-29 T 11-11-2016 SHALO_RS07490 3380998100d25bcebf06746c4d64110d 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 224 2.4E-6 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS07490 3380998100d25bcebf06746c4d64110d 229 SMART SM00862 154 224 3.9E-5 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS07490 3380998100d25bcebf06746c4d64110d 229 SUPERFAMILY SSF52172 10 175 5.41E-32 T 11-11-2016 IPR011006 CheY-like superfamily SHALO_RS01285 57f90347b1a12b649b8825f2814b4973 178 Gene3D G3DSA:2.40.240.10 2 87 2.1E-22 T 11-11-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: R-HSA-2408517|Reactome: R-HSA-379716 SHALO_RS01285 57f90347b1a12b649b8825f2814b4973 178 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 4 178 21.179 T 11-11-2016 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 SHALO_RS01285 57f90347b1a12b649b8825f2814b4973 178 SUPERFAMILY SSF50715 6 176 2.49E-44 T 11-11-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 SHALO_RS01285 57f90347b1a12b649b8825f2814b4973 178 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 2 87 2.0E-30 T 11-11-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 SHALO_RS01285 57f90347b1a12b649b8825f2814b4973 178 Pfam PF01386 Ribosomal L25p family 2 87 6.1E-20 T 11-11-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 SHALO_RS01285 57f90347b1a12b649b8825f2814b4973 178 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 100 177 6.4E-18 T 11-11-2016 IPR020057 Ribosomal protein L25, beta domain SHALO_RS01285 57f90347b1a12b649b8825f2814b4973 178 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 2 176 2.1E-46 T 11-11-2016 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 SHALO_RS01285 57f90347b1a12b649b8825f2814b4973 178 Gene3D G3DSA:2.170.120.20 98 177 3.1E-19 T 11-11-2016 IPR020057 Ribosomal protein L25, beta domain SHALO_RS05355 7b85a8952cf02158cae073b3f563922e 125 Pfam PF01022 Bacterial regulatory protein, arsR family 41 86 1.0E-19 T 11-11-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SHALO_RS05355 7b85a8952cf02158cae073b3f563922e 125 Gene3D G3DSA:1.10.10.10 3 116 1.1E-39 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS05355 7b85a8952cf02158cae073b3f563922e 125 SMART SM00418 34 112 2.5E-30 T 11-11-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SHALO_RS05355 7b85a8952cf02158cae073b3f563922e 125 SUPERFAMILY SSF46785 17 113 8.79E-29 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS05355 7b85a8952cf02158cae073b3f563922e 125 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 36 51 1.3E-19 T 11-11-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SHALO_RS05355 7b85a8952cf02158cae073b3f563922e 125 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 83 98 1.3E-19 T 11-11-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SHALO_RS05355 7b85a8952cf02158cae073b3f563922e 125 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 68 83 1.3E-19 T 11-11-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SHALO_RS05355 7b85a8952cf02158cae073b3f563922e 125 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 55 66 1.3E-19 T 11-11-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SHALO_RS05355 7b85a8952cf02158cae073b3f563922e 125 ProSitePatterns PS00846 Bacterial regulatory proteins, arsR family signature. 57 75 - T 11-11-2016 IPR018334 ArsR-type transcription regulator, HTH motif GO:0003700|GO:0005622|GO:0006355 SHALO_RS14410 cfd819cdc697a21a5aef2828d7b0895a 146 Gene3D G3DSA:3.40.30.10 56 141 2.6E-14 T 11-11-2016 IPR012336 Thioredoxin-like fold SHALO_RS14410 cfd819cdc697a21a5aef2828d7b0895a 146 SUPERFAMILY SSF52833 56 141 4.91E-16 T 11-11-2016 IPR012336 Thioredoxin-like fold SHALO_RS14410 cfd819cdc697a21a5aef2828d7b0895a 146 Pfam PF00085 Thioredoxin 55 141 5.6E-9 T 11-11-2016 IPR013766 Thioredoxin domain GO:0045454 SHALO_RS01660 20dd4cc9da7ffad49870a9756c040eb8 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 1.1E-8 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_RS01660 20dd4cc9da7ffad49870a9756c040eb8 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 1.1E-8 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_RS01660 20dd4cc9da7ffad49870a9756c040eb8 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 1.1E-8 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_RS01660 20dd4cc9da7ffad49870a9756c040eb8 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 3.0E-33 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_RS01660 20dd4cc9da7ffad49870a9756c040eb8 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 3.0E-33 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_RS01660 20dd4cc9da7ffad49870a9756c040eb8 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 3.0E-33 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_RS01660 20dd4cc9da7ffad49870a9756c040eb8 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 3.0E-33 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_RS01660 20dd4cc9da7ffad49870a9756c040eb8 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 3.0E-33 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_RS01660 20dd4cc9da7ffad49870a9756c040eb8 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 3.0E-33 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_RS01660 20dd4cc9da7ffad49870a9756c040eb8 250 Gene3D G3DSA:3.40.50.720 2 249 9.5E-76 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS01660 20dd4cc9da7ffad49870a9756c040eb8 250 SUPERFAMILY SSF51735 2 249 4.31E-72 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS01660 20dd4cc9da7ffad49870a9756c040eb8 250 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 10 248 2.3E-56 T 11-11-2016 SHALO_RS14385 1b26e858f6f6565186fd16af3db13cd7 147 TIGRFAM TIGR01909 C_GCAxxG_C_C: C_GCAxxG_C_C family protein 18 107 3.8E-17 T 11-11-2016 IPR010181 CGCAxxGCC motif SHALO_RS14385 1b26e858f6f6565186fd16af3db13cd7 147 SUPERFAMILY SSF48695 13 84 5.44E-6 T 11-11-2016 IPR011031 Multihaem cytochrome SHALO_RS14385 1b26e858f6f6565186fd16af3db13cd7 147 Pfam PF09719 Putative redox-active protein (C_GCAxxG_C_C) 17 139 9.5E-25 T 11-11-2016 IPR010181 CGCAxxGCC motif SHALO_RS06425 0198410a6f0bee12bf8a5beba2d3f03b 153 Pfam PF00072 Response regulator receiver domain 3 80 7.7E-11 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS06425 0198410a6f0bee12bf8a5beba2d3f03b 153 Gene3D G3DSA:3.40.50.2300 2 91 7.9E-16 T 11-11-2016 SHALO_RS06425 0198410a6f0bee12bf8a5beba2d3f03b 153 SUPERFAMILY SSF52172 2 88 1.99E-15 T 11-11-2016 IPR011006 CheY-like superfamily SHALO_RS00740 10e24849bb49a387dce2124d547c4c20 198 SUPERFAMILY SSF159594 28 195 2.35E-27 T 11-11-2016 SHALO_RS00740 10e24849bb49a387dce2124d547c4c20 198 Gene3D G3DSA:3.40.50.10610 17 196 1.3E-28 T 11-11-2016 IPR005586 ABC-type transport auxiliary lipoprotein component SHALO_RS00740 10e24849bb49a387dce2124d547c4c20 198 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 29 190 1.6E-10 T 11-11-2016 IPR005586 ABC-type transport auxiliary lipoprotein component SHALO_RS11150 123db1638c9c8d4b34e20d340d7e33ba 335 SUPERFAMILY SSF89000 286 333 6.67E-16 T 11-11-2016 SHALO_RS11150 123db1638c9c8d4b34e20d340d7e33ba 335 Pfam PF07836 DmpG-like communication domain 272 333 2.6E-25 T 11-11-2016 IPR012425 DmpG-like communication GO:0016833|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 SHALO_RS11150 123db1638c9c8d4b34e20d340d7e33ba 335 TIGRFAM TIGR03217 4OH_2_O_val_ald: 4-hydroxy-2-oxovalerate aldolase 4 334 8.4E-118 T 11-11-2016 IPR017629 4-hydroxy-2-oxovalerate aldolase GO:0008701|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 SHALO_RS11150 123db1638c9c8d4b34e20d340d7e33ba 335 SUPERFAMILY SSF51569 1 271 7.87E-62 T 11-11-2016 SHALO_RS11150 123db1638c9c8d4b34e20d340d7e33ba 335 ProDom PD005364 ALDOLASE 4-HYDROXY-2-OXOVALERATE LYASE PYRUVATE 4.1.3.- PLASMID HMG-COA LYASE-LIKE TRANSFERASE HOA 270 331 8.0E-15 T 11-11-2016 IPR012425 DmpG-like communication GO:0016833|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 SHALO_RS11150 123db1638c9c8d4b34e20d340d7e33ba 335 Hamap MF_01656 4-hydroxy-2-oxovalerate aldolase [mhpE]. 1 335 132.899 T 11-11-2016 IPR017629 4-hydroxy-2-oxovalerate aldolase GO:0008701|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 SHALO_RS11150 123db1638c9c8d4b34e20d340d7e33ba 335 Pfam PF00682 HMGL-like 4 262 1.4E-50 T 11-11-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 SHALO_RS11150 123db1638c9c8d4b34e20d340d7e33ba 335 Gene3D G3DSA:1.10.8.60 275 334 5.3E-25 T 11-11-2016 SHALO_RS11150 123db1638c9c8d4b34e20d340d7e33ba 335 Gene3D G3DSA:3.20.20.70 2 263 1.3E-54 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_RS08855 2696fcd25b16c0abc1144179deb0cc05 443 Gene3D G3DSA:3.90.226.10 418 437 1.7E-65 T 11-11-2016 IPR029045 ClpP/crotonase-like domain SHALO_RS08855 2696fcd25b16c0abc1144179deb0cc05 443 Gene3D G3DSA:3.90.226.10 184 364 1.7E-65 T 11-11-2016 IPR029045 ClpP/crotonase-like domain SHALO_RS08855 2696fcd25b16c0abc1144179deb0cc05 443 Pfam PF13180 PDZ domain 101 180 2.6E-13 T 11-11-2016 IPR001478 PDZ domain GO:0005515 SHALO_RS08855 2696fcd25b16c0abc1144179deb0cc05 443 SMART SM00245 174 362 8.0E-75 T 11-11-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 SHALO_RS08855 2696fcd25b16c0abc1144179deb0cc05 443 SUPERFAMILY SSF50156 75 198 4.66E-25 T 11-11-2016 IPR001478 PDZ domain GO:0005515 SHALO_RS08855 2696fcd25b16c0abc1144179deb0cc05 443 Gene3D G3DSA:3.30.750.44 62 106 5.2E-5 T 11-11-2016 SHALO_RS08855 2696fcd25b16c0abc1144179deb0cc05 443 Pfam PF03572 Peptidase family S41 200 361 2.3E-54 T 11-11-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 SHALO_RS08855 2696fcd25b16c0abc1144179deb0cc05 443 SMART SM00228 101 172 5.6E-17 T 11-11-2016 IPR001478 PDZ domain GO:0005515 SHALO_RS08855 2696fcd25b16c0abc1144179deb0cc05 443 Gene3D G3DSA:2.30.42.10 107 183 1.9E-27 T 11-11-2016 IPR001478 PDZ domain GO:0005515 SHALO_RS08855 2696fcd25b16c0abc1144179deb0cc05 443 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 60 377 1.2E-109 T 11-11-2016 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 SHALO_RS08855 2696fcd25b16c0abc1144179deb0cc05 443 SUPERFAMILY SSF52096 194 366 1.66E-74 T 11-11-2016 IPR029045 ClpP/crotonase-like domain SHALO_RS08855 2696fcd25b16c0abc1144179deb0cc05 443 SUPERFAMILY SSF52096 34 119 1.66E-74 T 11-11-2016 IPR029045 ClpP/crotonase-like domain SHALO_RS04780 d9d91a6edb0630b82b3e9bce518ffac2 277 Pfam PF12801 4Fe-4S binding domain 71 109 8.2E-12 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_RS04780 d9d91a6edb0630b82b3e9bce518ffac2 277 TIGRFAM TIGR02163 napH_: ferredoxin-type protein, NapH/MauN family 10 263 6.6E-96 T 11-11-2016 IPR011886 Ferredoxin-type protein, NapH/MauN family GO:0005506 SHALO_RS04780 d9d91a6edb0630b82b3e9bce518ffac2 277 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 246 257 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_RS04780 d9d91a6edb0630b82b3e9bce518ffac2 277 Pfam PF13237 4Fe-4S dicluster domain 208 256 1.8E-7 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_RS04780 d9d91a6edb0630b82b3e9bce518ffac2 277 Gene3D G3DSA:3.30.70.20 91 96 4.2E-18 T 11-11-2016 SHALO_RS04780 d9d91a6edb0630b82b3e9bce518ffac2 277 Gene3D G3DSA:3.30.70.20 181 265 4.2E-18 T 11-11-2016 SHALO_RS04780 d9d91a6edb0630b82b3e9bce518ffac2 277 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 215 226 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_RS04780 d9d91a6edb0630b82b3e9bce518ffac2 277 SUPERFAMILY SSF54862 185 264 3.72E-22 T 11-11-2016 SHALO_RS04780 d9d91a6edb0630b82b3e9bce518ffac2 277 SUPERFAMILY SSF54862 81 129 3.72E-22 T 11-11-2016 SHALO_RS09395 5320d03d0071fdb563b99cc77ae68fe5 328 Pfam PF12833 Helix-turn-helix domain 249 326 6.8E-20 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SHALO_RS09395 5320d03d0071fdb563b99cc77ae68fe5 328 SMART SM00342 242 324 1.3E-22 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SHALO_RS09395 5320d03d0071fdb563b99cc77ae68fe5 328 SUPERFAMILY SSF46689 227 276 4.3E-6 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 SHALO_RS09395 5320d03d0071fdb563b99cc77ae68fe5 328 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 279 320 - T 11-11-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 SHALO_RS09395 5320d03d0071fdb563b99cc77ae68fe5 328 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 308 324 8.8E-5 T 11-11-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SHALO_RS09395 5320d03d0071fdb563b99cc77ae68fe5 328 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 293 308 8.8E-5 T 11-11-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SHALO_RS09395 5320d03d0071fdb563b99cc77ae68fe5 328 SUPERFAMILY SSF46689 279 326 1.21E-10 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 SHALO_RS09395 5320d03d0071fdb563b99cc77ae68fe5 328 Gene3D G3DSA:1.10.10.60 279 326 3.5E-12 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 SHALO_RS09395 5320d03d0071fdb563b99cc77ae68fe5 328 Gene3D G3DSA:1.10.10.60 227 278 2.1E-9 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 SHALO_RS02720 e254aec9af726e57f72850b87652e69a 945 SUPERFAMILY SSF53850 288 505 2.84E-41 T 11-11-2016 SHALO_RS02720 e254aec9af726e57f72850b87652e69a 945 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 786 944 4.6E-46 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS02720 e254aec9af726e57f72850b87652e69a 945 Gene3D G3DSA:3.40.190.10 606 703 3.0E-9 T 11-11-2016 SHALO_RS02720 e254aec9af726e57f72850b87652e69a 945 Gene3D G3DSA:3.40.190.10 362 460 1.3E-15 T 11-11-2016 SHALO_RS02720 e254aec9af726e57f72850b87652e69a 945 Gene3D G3DSA:3.30.70.270 792 945 1.0E-45 T 11-11-2016 SHALO_RS02720 e254aec9af726e57f72850b87652e69a 945 SMART SM00267 779 945 2.1E-42 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS02720 e254aec9af726e57f72850b87652e69a 945 Pfam PF00990 Diguanylate cyclase, GGDEF domain 791 943 1.3E-38 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS02720 e254aec9af726e57f72850b87652e69a 945 SUPERFAMILY SSF55073 795 945 5.65E-43 T 11-11-2016 IPR029787 Nucleotide cyclase SHALO_RS02720 e254aec9af726e57f72850b87652e69a 945 SMART SM00062 285 507 1.1E-28 T 11-11-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SHALO_RS02720 e254aec9af726e57f72850b87652e69a 945 SMART SM00062 38 258 5.7E-15 T 11-11-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SHALO_RS02720 e254aec9af726e57f72850b87652e69a 945 SMART SM00062 529 748 6.7E-25 T 11-11-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SHALO_RS02720 e254aec9af726e57f72850b87652e69a 945 SUPERFAMILY SSF53850 39 256 5.83E-33 T 11-11-2016 SHALO_RS02720 e254aec9af726e57f72850b87652e69a 945 SUPERFAMILY SSF53850 530 748 5.6E-36 T 11-11-2016 SHALO_RS02720 e254aec9af726e57f72850b87652e69a 945 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 39 255 8.8E-25 T 11-11-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SHALO_RS02720 e254aec9af726e57f72850b87652e69a 945 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 293 505 4.3E-34 T 11-11-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SHALO_RS02720 e254aec9af726e57f72850b87652e69a 945 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 530 745 3.8E-24 T 11-11-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SHALO_RS02720 e254aec9af726e57f72850b87652e69a 945 Gene3D G3DSA:3.40.190.10 467 505 8.3E-21 T 11-11-2016 SHALO_RS02720 e254aec9af726e57f72850b87652e69a 945 Gene3D G3DSA:3.40.190.10 36 124 3.5E-20 T 11-11-2016 SHALO_RS02720 e254aec9af726e57f72850b87652e69a 945 Gene3D G3DSA:3.40.190.10 285 361 8.3E-21 T 11-11-2016 SHALO_RS02720 e254aec9af726e57f72850b87652e69a 945 Gene3D G3DSA:3.40.190.10 218 255 3.5E-20 T 11-11-2016 SHALO_RS02720 e254aec9af726e57f72850b87652e69a 945 Gene3D G3DSA:3.40.190.10 526 605 3.1E-16 T 11-11-2016 SHALO_RS02720 e254aec9af726e57f72850b87652e69a 945 Gene3D G3DSA:3.40.190.10 708 747 3.1E-16 T 11-11-2016 SHALO_RS07130 d64f449e4578efd666c2df0dc1dac382 201 Pfam PF13419 Haloacid dehalogenase-like hydrolase 1 172 2.4E-32 T 11-11-2016 IPR023214 HAD-like domain SHALO_RS07130 d64f449e4578efd666c2df0dc1dac382 201 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 89 167 3.2E-7 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SHALO_RS07130 d64f449e4578efd666c2df0dc1dac382 201 Gene3D G3DSA:3.40.50.1000 61 196 1.4E-31 T 11-11-2016 IPR023214 HAD-like domain SHALO_RS07130 d64f449e4578efd666c2df0dc1dac382 201 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 56 171 6.6E-9 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SHALO_RS07130 d64f449e4578efd666c2df0dc1dac382 201 SUPERFAMILY SSF56784 1 198 1.33E-41 T 11-11-2016 IPR023214 HAD-like domain SHALO_RS09590 0ef340debfde425b5480d4fca174149e 210 PIRSF PIRSF006324 1 209 1.1E-55 T 11-11-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 SHALO_RS09590 0ef340debfde425b5480d4fca174149e 210 Pfam PF01810 LysE type translocator 15 205 1.1E-32 T 11-11-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 SHALO_RS13295 6ffb7cec93f69355b90546ad58905e0f 279 SUPERFAMILY SSF53850 28 262 3.51E-24 T 11-11-2016 SHALO_RS13295 6ffb7cec93f69355b90546ad58905e0f 279 Gene3D G3DSA:3.40.190.10 117 222 1.3E-32 T 11-11-2016 SHALO_RS13295 6ffb7cec93f69355b90546ad58905e0f 279 Pfam PF12849 PBP superfamily domain 29 252 2.0E-29 T 11-11-2016 IPR024370 PBP domain SHALO_RS13295 6ffb7cec93f69355b90546ad58905e0f 279 Gene3D G3DSA:3.40.190.10 223 261 1.1E-11 T 11-11-2016 SHALO_RS13295 6ffb7cec93f69355b90546ad58905e0f 279 Gene3D G3DSA:3.40.190.10 35 116 1.1E-11 T 11-11-2016 SHALO_RS03335 5cf17755100a7c45775c69b2d85cd959 123 Gene3D G3DSA:3.30.1330.40 2 122 4.3E-52 T 11-11-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like SHALO_RS03335 5cf17755100a7c45775c69b2d85cd959 123 Pfam PF01042 Endoribonuclease L-PSP 7 122 2.9E-46 T 11-11-2016 IPR006175 YjgF/YER057c/UK114 family SHALO_RS03335 5cf17755100a7c45775c69b2d85cd959 123 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 99 117 - T 11-11-2016 IPR019897 RidA, conserved site SHALO_RS03335 5cf17755100a7c45775c69b2d85cd959 123 SUPERFAMILY SSF55298 2 123 1.73E-49 T 11-11-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like SHALO_RS03335 5cf17755100a7c45775c69b2d85cd959 123 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 1 123 1.1E-54 T 11-11-2016 IPR006056 RidA family SHALO_RS03730 0d41a2aeb9daf03c582bbed9999e80d4 263 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 3 258 2.2E-68 T 11-11-2016 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 SHALO_RS03730 0d41a2aeb9daf03c582bbed9999e80d4 263 Gene3D G3DSA:3.40.50.720 104 258 2.5E-35 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS03730 0d41a2aeb9daf03c582bbed9999e80d4 263 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 6 86 6.9E-25 T 11-11-2016 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 SHALO_RS03730 0d41a2aeb9daf03c582bbed9999e80d4 263 SUPERFAMILY SSF53223 2 98 8.06E-29 T 11-11-2016 SHALO_RS03730 0d41a2aeb9daf03c582bbed9999e80d4 263 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 1 259 27.984 T 11-11-2016 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 SHALO_RS03730 0d41a2aeb9daf03c582bbed9999e80d4 263 Gene3D G3DSA:3.40.192.10 3 103 7.4E-35 T 11-11-2016 SHALO_RS03730 0d41a2aeb9daf03c582bbed9999e80d4 263 SUPERFAMILY SSF51735 99 259 3.0E-28 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS04495 bca7aefcd5538555e5a9319eb4e92c31 233 Gene3D G3DSA:1.10.10.10 134 220 2.5E-13 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS04495 bca7aefcd5538555e5a9319eb4e92c31 233 SMART SM00862 149 219 2.8E-7 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS04495 bca7aefcd5538555e5a9319eb4e92c31 233 Pfam PF00072 Response regulator receiver domain 4 114 4.9E-23 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS04495 bca7aefcd5538555e5a9319eb4e92c31 233 SUPERFAMILY SSF52172 1 169 2.7E-31 T 11-11-2016 IPR011006 CheY-like superfamily SHALO_RS04495 bca7aefcd5538555e5a9319eb4e92c31 233 SMART SM00448 2 114 1.6E-29 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS04495 bca7aefcd5538555e5a9319eb4e92c31 233 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 218 1.4E-9 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS04495 bca7aefcd5538555e5a9319eb4e92c31 233 Gene3D G3DSA:3.40.50.2300 1 122 1.8E-30 T 11-11-2016 SHALO_RS04495 bca7aefcd5538555e5a9319eb4e92c31 233 SUPERFAMILY SSF46894 148 219 9.18E-10 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SHALO_RS14720 8200d69e2795628f123c676d012aac1c 428 PRINTS PR00143 Citrate synthase signature 221 236 1.1E-49 T 11-11-2016 IPR002020 Citrate synthase GO:0046912 SHALO_RS14720 8200d69e2795628f123c676d012aac1c 428 PRINTS PR00143 Citrate synthase signature 167 180 1.1E-49 T 11-11-2016 IPR002020 Citrate synthase GO:0046912 SHALO_RS14720 8200d69e2795628f123c676d012aac1c 428 PRINTS PR00143 Citrate synthase signature 298 318 1.1E-49 T 11-11-2016 IPR002020 Citrate synthase GO:0046912 SHALO_RS14720 8200d69e2795628f123c676d012aac1c 428 PRINTS PR00143 Citrate synthase signature 243 271 1.1E-49 T 11-11-2016 IPR002020 Citrate synthase GO:0046912 SHALO_RS14720 8200d69e2795628f123c676d012aac1c 428 PRINTS PR00143 Citrate synthase signature 361 377 1.1E-49 T 11-11-2016 IPR002020 Citrate synthase GO:0046912 SHALO_RS14720 8200d69e2795628f123c676d012aac1c 428 PRINTS PR00143 Citrate synthase signature 381 395 1.1E-49 T 11-11-2016 IPR002020 Citrate synthase GO:0046912 SHALO_RS14720 8200d69e2795628f123c676d012aac1c 428 Pfam PF00285 Citrate synthase, C-terminal domain 48 413 1.1E-125 T 11-11-2016 IPR002020 Citrate synthase GO:0046912 SHALO_RS14720 8200d69e2795628f123c676d012aac1c 428 PIRSF PIRSF001369 39 426 8.6E-148 T 11-11-2016 IPR024176 Citrate synthase, bacterial-type SHALO_RS14720 8200d69e2795628f123c676d012aac1c 428 Gene3D G3DSA:1.10.230.10 283 375 3.7E-36 T 11-11-2016 IPR016143 Citrate synthase-like, small alpha subdomain Reactome: R-HSA-163765|Reactome: R-HSA-75105 SHALO_RS14720 8200d69e2795628f123c676d012aac1c 428 Gene3D G3DSA:1.10.580.10 54 282 2.4E-91 T 11-11-2016 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 SHALO_RS14720 8200d69e2795628f123c676d012aac1c 428 SUPERFAMILY SSF48256 8 422 1.06E-151 T 11-11-2016 IPR002020 Citrate synthase GO:0046912 SHALO_RS14720 8200d69e2795628f123c676d012aac1c 428 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 15 422 2.2E-170 T 11-11-2016 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 SHALO_RS14720 8200d69e2795628f123c676d012aac1c 428 ProSitePatterns PS00480 Citrate synthase signature. 305 317 - T 11-11-2016 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 SHALO_RS08670 12d991c5cebbb6fe9c4cb553ea3b99c6 287 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 15 276 1.3E-61 T 11-11-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168 SHALO_RS08670 12d991c5cebbb6fe9c4cb553ea3b99c6 287 SUPERFAMILY SSF82114 145 278 2.62E-32 T 11-11-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 SHALO_RS08670 12d991c5cebbb6fe9c4cb553ea3b99c6 287 Pfam PF01687 Riboflavin kinase 156 276 1.9E-26 T 11-11-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 SHALO_RS08670 12d991c5cebbb6fe9c4cb553ea3b99c6 287 Gene3D G3DSA:2.40.30.30 160 278 2.5E-27 T 11-11-2016 IPR023465 Riboflavin kinase domain GO:0008531|GO:0009231 Reactome: R-HSA-196843 SHALO_RS08670 12d991c5cebbb6fe9c4cb553ea3b99c6 287 Gene3D G3DSA:3.40.50.620 9 37 1.3E-5 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHALO_RS08670 12d991c5cebbb6fe9c4cb553ea3b99c6 287 Gene3D G3DSA:3.40.50.620 66 158 1.4E-21 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHALO_RS08670 12d991c5cebbb6fe9c4cb553ea3b99c6 287 SMART SM00904 155 277 3.1E-39 T 11-11-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 SHALO_RS08670 12d991c5cebbb6fe9c4cb553ea3b99c6 287 SUPERFAMILY SSF52374 16 158 1.16E-16 T 11-11-2016 SHALO_RS08670 12d991c5cebbb6fe9c4cb553ea3b99c6 287 Pfam PF06574 FAD synthetase 14 36 1.3E-5 T 11-11-2016 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168 SHALO_RS08670 12d991c5cebbb6fe9c4cb553ea3b99c6 287 Pfam PF06574 FAD synthetase 72 138 8.4E-7 T 11-11-2016 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168 SHALO_RS13550 71a837554ad4dc7643d326a5e4ea5b23 70 SMART SM00704 1 38 0.0011 T 11-11-2016 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 SHALO_RS13550 71a837554ad4dc7643d326a5e4ea5b23 70 SMART SM00704 39 70 0.0039 T 11-11-2016 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 SHALO_RS13550 71a837554ad4dc7643d326a5e4ea5b23 70 Pfam PF09360 Iron-binding zinc finger CDGSH type 48 68 4.2E-10 T 11-11-2016 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 SHALO_RS13550 71a837554ad4dc7643d326a5e4ea5b23 70 Pfam PF09360 Iron-binding zinc finger CDGSH type 10 33 1.6E-6 T 11-11-2016 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 SHALO_RS07910 f6b2112a21c7e865020e362fa70263b9 248 Gene3D G3DSA:3.40.50.300 6 242 1.3E-85 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS07910 f6b2112a21c7e865020e362fa70263b9 248 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHALO_RS07910 f6b2112a21c7e865020e362fa70263b9 248 PIRSF PIRSF039085 4 247 1.5E-111 T 11-11-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 SHALO_RS07910 f6b2112a21c7e865020e362fa70263b9 248 SMART SM00382 32 227 2.1E-15 T 11-11-2016 IPR003593 AAA+ ATPase domain SHALO_RS07910 f6b2112a21c7e865020e362fa70263b9 248 SUPERFAMILY SSF52540 7 240 2.48E-82 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS07910 f6b2112a21c7e865020e362fa70263b9 248 Pfam PF00005 ABC transporter 23 171 3.7E-38 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_RS12855 aca33d81559f378479ebbdfa82487a49 207 PIRSF PIRSF006324 1 206 2.2E-47 T 11-11-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 SHALO_RS12855 aca33d81559f378479ebbdfa82487a49 207 Pfam PF01810 LysE type translocator 15 201 2.6E-27 T 11-11-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 SHALO_RS02185 93f09ba6c1b8f2baa9f8390d4e4afe88 789 Gene3D G3DSA:3.40.50.300 701 788 9.4E-10 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS02185 93f09ba6c1b8f2baa9f8390d4e4afe88 789 SUPERFAMILY SSF75712 363 457 7.06E-5 T 11-11-2016 SHALO_RS02185 93f09ba6c1b8f2baa9f8390d4e4afe88 789 Gene3D G3DSA:3.40.50.300 1 144 2.0E-25 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS02185 93f09ba6c1b8f2baa9f8390d4e4afe88 789 SUPERFAMILY SSF52540 1 165 5.79E-29 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS02185 93f09ba6c1b8f2baa9f8390d4e4afe88 789 SUPERFAMILY SSF52540 606 783 5.79E-29 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS02185 93f09ba6c1b8f2baa9f8390d4e4afe88 789 Gene3D G3DSA:1.10.287.510 363 464 6.7E-6 T 11-11-2016 SHALO_RS02185 93f09ba6c1b8f2baa9f8390d4e4afe88 789 Pfam PF13476 AAA domain 5 254 1.7E-20 T 11-11-2016 SHALO_RS14870 69f26fb86cb5976903414562f5651819 191 SUPERFAMILY SSF53448 6 187 2.48E-22 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases SHALO_RS14870 69f26fb86cb5976903414562f5651819 191 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 4 187 20.974 T 11-11-2016 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 MetaCyc: PWY-5964|MetaCyc: PWY-7639 SHALO_RS14870 69f26fb86cb5976903414562f5651819 191 Pfam PF12804 MobA-like NTP transferase domain 9 161 3.8E-24 T 11-11-2016 IPR025877 MobA-like NTP transferase SHALO_RS14870 69f26fb86cb5976903414562f5651819 191 Gene3D G3DSA:3.90.550.10 8 190 4.0E-45 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases SHALO_RS08415 7463b4e635afe2a80b380a98f7324ba5 216 TIGRFAM TIGR00319 desulf_FeS4: desulfoferrodoxin FeS4 iron-binding domain 3 33 6.5E-11 T 11-11-2016 IPR004462 Desulfoferrodoxin Dfx GO:0005506 SHALO_RS08415 7463b4e635afe2a80b380a98f7324ba5 216 Gene3D G3DSA:1.20.1260.10 38 168 3.9E-42 T 11-11-2016 IPR012347 Ferritin-related SHALO_RS08415 7463b4e635afe2a80b380a98f7324ba5 216 Pfam PF06397 Desulfoferrodoxin, N-terminal domain 3 35 1.1E-11 T 11-11-2016 IPR004462 Desulfoferrodoxin Dfx GO:0005506 SHALO_RS08415 7463b4e635afe2a80b380a98f7324ba5 216 Gene3D G3DSA:2.60.40.730 1 37 1.1E-6 T 11-11-2016 SHALO_RS08415 7463b4e635afe2a80b380a98f7324ba5 216 Pfam PF02915 Rubrerythrin 44 163 1.2E-21 T 11-11-2016 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 SHALO_RS08415 7463b4e635afe2a80b380a98f7324ba5 216 SUPERFAMILY SSF57802 2 36 2.98E-10 T 11-11-2016 SHALO_RS08415 7463b4e635afe2a80b380a98f7324ba5 216 SUPERFAMILY SSF57802 175 212 5.89E-11 T 11-11-2016 SHALO_RS08415 7463b4e635afe2a80b380a98f7324ba5 216 SUPERFAMILY SSF47240 41 171 2.22E-31 T 11-11-2016 IPR009078 Ferritin-like superfamily SHALO_RS08415 7463b4e635afe2a80b380a98f7324ba5 216 Gene3D G3DSA:2.20.28.10 173 212 3.6E-17 T 11-11-2016 IPR004039 Rubredoxin-type fold SHALO_RS12325 e27112ec579aa75d7619683713ae6541 552 PIRSF PIRSF002811 1 548 3.1E-137 T 11-11-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 SHALO_RS12325 e27112ec579aa75d7619683713ae6541 552 SMART SM00400 33 87 9.7E-31 T 11-11-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 SHALO_RS12325 e27112ec579aa75d7619683713ae6541 552 Pfam PF01807 CHC2 zinc finger 3 97 6.9E-37 T 11-11-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 SHALO_RS12325 e27112ec579aa75d7619683713ae6541 552 SUPERFAMILY SSF57783 1 96 1.41E-34 T 11-11-2016 SHALO_RS12325 e27112ec579aa75d7619683713ae6541 552 Pfam PF08275 DNA primase catalytic core, N-terminal domain 116 238 3.5E-32 T 11-11-2016 IPR013264 DNA primase, catalytic core, N-terminal SHALO_RS12325 e27112ec579aa75d7619683713ae6541 552 TIGRFAM TIGR01391 dnaG: DNA primase 1 401 3.0E-131 T 11-11-2016 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 SHALO_RS12325 e27112ec579aa75d7619683713ae6541 552 Pfam PF16730 DnaG-primase C-terminal, helicase-binding domain 428 545 5.0E-45 T 11-11-2016 IPR031988 DNA primase DnaG, C-terminal helicase-binding domain SHALO_RS12325 e27112ec579aa75d7619683713ae6541 552 Pfam PF10410 DnaB-helicase binding domain of primase 353 404 6.4E-8 T 11-11-2016 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 SHALO_RS12325 e27112ec579aa75d7619683713ae6541 552 Hamap MF_00974 DNA primase [dnaG]. 1 536 25.369 T 11-11-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 SHALO_RS12325 e27112ec579aa75d7619683713ae6541 552 Gene3D G3DSA:3.90.980.10 108 227 1.6E-29 T 11-11-2016 IPR013264 DNA primase, catalytic core, N-terminal SHALO_RS12325 e27112ec579aa75d7619683713ae6541 552 SMART SM00493 246 317 5.3E-17 T 11-11-2016 IPR006171 Toprim domain SHALO_RS12325 e27112ec579aa75d7619683713ae6541 552 Gene3D G3DSA:3.90.580.10 1 96 7.2E-38 T 11-11-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 SHALO_RS12325 e27112ec579aa75d7619683713ae6541 552 SUPERFAMILY SSF56731 108 406 6.41E-84 T 11-11-2016 SHALO_RS12325 e27112ec579aa75d7619683713ae6541 552 Gene3D G3DSA:3.40.1360.10 228 348 1.7E-36 T 11-11-2016 SHALO_RS12325 e27112ec579aa75d7619683713ae6541 552 Pfam PF13662 Toprim domain 247 321 1.0E-16 T 11-11-2016 IPR006171 Toprim domain SHALO_RS12425 76d000ffb9818696780929351f15b54d 596 PRINTS PR01607 Apyrase family signature 286 303 2.0E-11 T 11-11-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 SHALO_RS12425 76d000ffb9818696780929351f15b54d 596 PRINTS PR01607 Apyrase family signature 305 328 2.0E-11 T 11-11-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 SHALO_RS12425 76d000ffb9818696780929351f15b54d 596 PRINTS PR01607 Apyrase family signature 337 357 2.0E-11 T 11-11-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 SHALO_RS12425 76d000ffb9818696780929351f15b54d 596 PRINTS PR01607 Apyrase family signature 47 65 2.0E-11 T 11-11-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 SHALO_RS12425 76d000ffb9818696780929351f15b54d 596 SUPERFAMILY SSF55816 397 572 6.8E-29 T 11-11-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 SHALO_RS12425 76d000ffb9818696780929351f15b54d 596 SUPERFAMILY SSF56300 45 66 1.1E-73 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like SHALO_RS12425 76d000ffb9818696780929351f15b54d 596 SUPERFAMILY SSF56300 120 398 1.1E-73 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like SHALO_RS12425 76d000ffb9818696780929351f15b54d 596 Pfam PF02872 5'-nucleotidase, C-terminal domain 401 547 6.7E-15 T 11-11-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 SHALO_RS12425 76d000ffb9818696780929351f15b54d 596 Gene3D G3DSA:3.90.780.10 401 542 1.4E-15 T 11-11-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 SHALO_RS12425 76d000ffb9818696780929351f15b54d 596 Gene3D G3DSA:3.60.21.10 120 398 1.1E-75 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like SHALO_RS12425 76d000ffb9818696780929351f15b54d 596 Gene3D G3DSA:3.60.21.10 48 66 1.1E-75 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like SHALO_RS12425 76d000ffb9818696780929351f15b54d 596 TIGRFAM TIGR04486 thiosulf_SoxB: thiosulfohydrolase SoxB 5 582 6.8E-243 T 11-11-2016 IPR030998 Thiosulfohydrolase SoxB SHALO_RS10690 cfd4fae03156fe9f0446d0073d002340 110 Pfam PF13359 DDE superfamily endonuclease 5 102 2.7E-10 T 11-11-2016 IPR027806 Harbinger transposase-derived nuclease domain SHALO_RS01335 cfd4fae03156fe9f0446d0073d002340 110 Pfam PF13359 DDE superfamily endonuclease 5 102 2.7E-10 T 11-11-2016 IPR027806 Harbinger transposase-derived nuclease domain SHALO_RS07460 cfd4fae03156fe9f0446d0073d002340 110 Pfam PF13359 DDE superfamily endonuclease 5 102 2.7E-10 T 11-11-2016 IPR027806 Harbinger transposase-derived nuclease domain SHALO_RS03400 fead35abe2c92631f2bc39746d6b4cec 217 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 9 194 3.4E-26 T 11-11-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 Reactome: R-HSA-196780|Reactome: R-HSA-3371599 SHALO_RS03400 fead35abe2c92631f2bc39746d6b4cec 217 SUPERFAMILY SSF55681 6 159 4.05E-29 T 11-11-2016 SHALO_RS03400 fead35abe2c92631f2bc39746d6b4cec 217 Gene3D G3DSA:3.30.930.10 7 179 2.3E-27 T 11-11-2016 SHALO_RS03400 fead35abe2c92631f2bc39746d6b4cec 217 Pfam PF03099 Biotin/lipoate A/B protein ligase family 13 123 1.7E-12 T 11-11-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 SHALO_RS01860 528d7c448fdbf5a7f7763507a7fe9b1b 633 SUPERFAMILY SSF56349 284 458 2.65E-14 T 11-11-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 SHALO_RS01860 528d7c448fdbf5a7f7763507a7fe9b1b 633 Gene3D G3DSA:1.10.443.10 285 446 3.5E-12 T 11-11-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 SHALO_RS01860 528d7c448fdbf5a7f7763507a7fe9b1b 633 Pfam PF00589 Phage integrase family 283 446 4.6E-9 T 11-11-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 SHALO_RS03120 d0a4f04afd5e5362bc1cb0ddfdeccf19 220 SMART SM00862 151 220 1.6E-9 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS03120 d0a4f04afd5e5362bc1cb0ddfdeccf19 220 Pfam PF00072 Response regulator receiver domain 10 119 3.1E-24 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS03120 d0a4f04afd5e5362bc1cb0ddfdeccf19 220 SUPERFAMILY SSF52172 7 185 1.41E-34 T 11-11-2016 IPR011006 CheY-like superfamily SHALO_RS03120 d0a4f04afd5e5362bc1cb0ddfdeccf19 220 Pfam PF00486 Transcriptional regulatory protein, C terminal 154 220 6.5E-11 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS03120 d0a4f04afd5e5362bc1cb0ddfdeccf19 220 Gene3D G3DSA:3.40.50.2300 7 156 2.7E-31 T 11-11-2016 SHALO_RS03120 d0a4f04afd5e5362bc1cb0ddfdeccf19 220 SMART SM00448 8 119 5.0E-28 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS03120 d0a4f04afd5e5362bc1cb0ddfdeccf19 220 Gene3D G3DSA:1.10.10.10 157 220 7.7E-12 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS03145 c552dd6a239f778578f5c0545b19bba2 111 Gene3D G3DSA:1.20.120.580 69 107 5.3E-4 T 11-11-2016 SHALO_RS03145 c552dd6a239f778578f5c0545b19bba2 111 Pfam PF01934 Protein of unknown function DUF86 13 107 4.1E-18 T 11-11-2016 IPR008201 Protein of unknown function DUF86 SHALO_RS13945 dbe5c8787ac9fdab291c95fb2931cd1a 171 SUPERFAMILY SSF56420 1 168 2.22E-54 T 11-11-2016 IPR023635 Peptide deformylase SHALO_RS13945 dbe5c8787ac9fdab291c95fb2931cd1a 171 Hamap MF_00163 Peptide deformylase [def]. 1 166 27.199 T 11-11-2016 IPR023635 Peptide deformylase SHALO_RS13945 dbe5c8787ac9fdab291c95fb2931cd1a 171 Pfam PF01327 Polypeptide deformylase 3 156 2.3E-47 T 11-11-2016 IPR023635 Peptide deformylase SHALO_RS13945 dbe5c8787ac9fdab291c95fb2931cd1a 171 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 3 165 3.0E-52 T 11-11-2016 IPR023635 Peptide deformylase SHALO_RS13945 dbe5c8787ac9fdab291c95fb2931cd1a 171 Gene3D G3DSA:3.90.45.10 4 168 9.8E-56 T 11-11-2016 IPR023635 Peptide deformylase SHALO_RS13945 dbe5c8787ac9fdab291c95fb2931cd1a 171 PIRSF PIRSF004749 1 171 1.4E-47 T 11-11-2016 IPR023635 Peptide deformylase SHALO_RS13945 dbe5c8787ac9fdab291c95fb2931cd1a 171 PRINTS PR01576 Peptide deformylase signature 124 153 1.5E-32 T 11-11-2016 IPR023635 Peptide deformylase SHALO_RS13945 dbe5c8787ac9fdab291c95fb2931cd1a 171 PRINTS PR01576 Peptide deformylase signature 105 123 1.5E-32 T 11-11-2016 IPR023635 Peptide deformylase SHALO_RS13945 dbe5c8787ac9fdab291c95fb2931cd1a 171 PRINTS PR01576 Peptide deformylase signature 32 61 1.5E-32 T 11-11-2016 IPR023635 Peptide deformylase SHALO_RS13945 dbe5c8787ac9fdab291c95fb2931cd1a 171 PRINTS PR01576 Peptide deformylase signature 93 104 1.5E-32 T 11-11-2016 IPR023635 Peptide deformylase SHALO_RS06200 49b480684c68f1cc279d29846162c815 754 Gene3D G3DSA:3.30.70.270 332 493 7.8E-48 T 11-11-2016 SHALO_RS06200 49b480684c68f1cc279d29846162c815 754 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 329 483 9.1E-36 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS06200 49b480684c68f1cc279d29846162c815 754 Pfam PF02743 Cache domain 38 235 5.5E-12 T 11-11-2016 IPR033479 Double Cache domain 1 SHALO_RS06200 49b480684c68f1cc279d29846162c815 754 SUPERFAMILY SSF55073 336 483 2.2E-42 T 11-11-2016 IPR029787 Nucleotide cyclase SHALO_RS06200 49b480684c68f1cc279d29846162c815 754 SMART SM00267 321 487 1.2E-48 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS06200 49b480684c68f1cc279d29846162c815 754 Gene3D G3DSA:3.20.20.450 501 749 1.0E-83 T 11-11-2016 IPR001633 EAL domain SHALO_RS06200 49b480684c68f1cc279d29846162c815 754 Pfam PF00990 Diguanylate cyclase, GGDEF domain 331 481 3.4E-40 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS06200 49b480684c68f1cc279d29846162c815 754 SMART SM00052 497 742 1.2E-99 T 11-11-2016 IPR001633 EAL domain SHALO_RS06200 49b480684c68f1cc279d29846162c815 754 Gene3D G3DSA:3.30.450.20 78 173 3.8E-6 T 11-11-2016 SHALO_RS06200 49b480684c68f1cc279d29846162c815 754 Pfam PF00563 EAL domain 503 737 4.1E-67 T 11-11-2016 IPR001633 EAL domain SHALO_RS06200 49b480684c68f1cc279d29846162c815 754 SUPERFAMILY SSF141868 502 750 1.96E-79 T 11-11-2016 IPR001633 EAL domain SHALO_RS06575 26126616fe926855f0ed32a00806f38e 708 Pfam PF02754 Cysteine-rich domain 465 547 5.0E-15 T 11-11-2016 IPR004017 Cysteine-rich domain SHALO_RS06575 26126616fe926855f0ed32a00806f38e 708 Pfam PF02754 Cysteine-rich domain 601 684 9.0E-16 T 11-11-2016 IPR004017 Cysteine-rich domain SHALO_RS06575 26126616fe926855f0ed32a00806f38e 708 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 304 315 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_RS06575 26126616fe926855f0ed32a00806f38e 708 Pfam PF02589 Uncharacterised ACR, YkgG family COG1556 63 284 1.2E-55 T 11-11-2016 IPR003741 LUD domain SHALO_RS06575 26126616fe926855f0ed32a00806f38e 708 Pfam PF13183 4Fe-4S dicluster domain 301 368 8.0E-8 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_RS06575 26126616fe926855f0ed32a00806f38e 708 Gene3D G3DSA:1.10.1060.10 285 386 3.4E-11 T 11-11-2016 SHALO_RS06575 26126616fe926855f0ed32a00806f38e 708 SUPERFAMILY SSF100950 57 80 1.88E-37 T 11-11-2016 SHALO_RS06575 26126616fe926855f0ed32a00806f38e 708 SUPERFAMILY SSF100950 127 285 1.88E-37 T 11-11-2016 SHALO_RS06575 26126616fe926855f0ed32a00806f38e 708 Gene3D G3DSA:3.40.50.10420 57 120 2.3E-48 T 11-11-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain SHALO_RS06575 26126616fe926855f0ed32a00806f38e 708 Gene3D G3DSA:3.40.50.10420 181 279 2.3E-48 T 11-11-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain SHALO_RS06575 26126616fe926855f0ed32a00806f38e 708 SUPERFAMILY SSF46548 273 382 2.62E-14 T 11-11-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 SHALO_RS07435 3810a47d93649d138681603b02d194d6 276 Pfam PF00226 DnaJ domain 208 265 8.9E-11 T 11-11-2016 IPR001623 DnaJ domain SHALO_RS07435 3810a47d93649d138681603b02d194d6 276 SUPERFAMILY SSF46565 205 265 1.02E-12 T 11-11-2016 IPR001623 DnaJ domain SHALO_RS07435 3810a47d93649d138681603b02d194d6 276 Gene3D G3DSA:1.10.287.110 206 265 5.5E-10 T 11-11-2016 IPR001623 DnaJ domain SHALO_RS07435 3810a47d93649d138681603b02d194d6 276 SMART SM00271 206 269 6.2E-9 T 11-11-2016 IPR001623 DnaJ domain SHALO_RS10100 582d0622d793812fc34d5225dddefd95 154 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 5 130 2.0E-44 T 11-11-2016 IPR000037 SsrA-binding protein GO:0003723 SHALO_RS10100 582d0622d793812fc34d5225dddefd95 154 Gene3D G3DSA:2.40.280.10 5 125 6.3E-46 T 11-11-2016 IPR023620 Small protein B SHALO_RS10100 582d0622d793812fc34d5225dddefd95 154 SUPERFAMILY SSF74982 5 130 2.35E-43 T 11-11-2016 IPR023620 Small protein B SHALO_RS10100 582d0622d793812fc34d5225dddefd95 154 ProSitePatterns PS01317 SsrA-binding protein. 23 35 - T 11-11-2016 IPR020081 SsrA-binding protein, conserved site SHALO_RS10100 582d0622d793812fc34d5225dddefd95 154 Pfam PF01668 SmpB protein 5 68 1.9E-28 T 11-11-2016 IPR000037 SsrA-binding protein GO:0003723 SHALO_RS10100 582d0622d793812fc34d5225dddefd95 154 Hamap MF_00023 SsrA-binding protein [smpB]. 1 153 62.384 T 11-11-2016 IPR000037 SsrA-binding protein GO:0003723 SHALO_RS10100 582d0622d793812fc34d5225dddefd95 154 TIGRFAM TIGR00086 smpB: SsrA-binding protein 5 148 3.2E-55 T 11-11-2016 IPR000037 SsrA-binding protein GO:0003723 SHALO_RS01030 ab0e451b711b21fa782a3a2aa92fb157 170 Pfam PF08447 PAS fold 30 114 4.5E-11 T 11-11-2016 IPR013655 PAS fold-3 GO:0005515 SHALO_RS01030 ab0e451b711b21fa782a3a2aa92fb157 170 SUPERFAMILY SSF55785 20 115 1.16E-21 T 11-11-2016 IPR000014 PAS domain SHALO_RS01030 ab0e451b711b21fa782a3a2aa92fb157 170 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 23 114 2.5E-9 T 11-11-2016 IPR000014 PAS domain SHALO_RS01030 ab0e451b711b21fa782a3a2aa92fb157 170 Gene3D G3DSA:3.30.450.20 19 114 1.8E-17 T 11-11-2016 SHALO_RS00460 709041a47ec4082c6b31de9adec6635e 546 SUPERFAMILY SSF52317 291 540 1.91E-72 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like SHALO_RS00460 709041a47ec4082c6b31de9adec6635e 546 Gene3D G3DSA:3.40.50.880 291 542 3.0E-91 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like SHALO_RS00460 709041a47ec4082c6b31de9adec6635e 546 SUPERFAMILY SSF52540 6 271 2.95E-116 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS00460 709041a47ec4082c6b31de9adec6635e 546 TIGRFAM TIGR00337 PyrG: CTP synthase 5 538 1.0E-235 T 11-11-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 SHALO_RS00460 709041a47ec4082c6b31de9adec6635e 546 Pfam PF00117 Glutamine amidotransferase class-I 304 537 2.6E-52 T 11-11-2016 IPR017926 Glutamine amidotransferase SHALO_RS00460 709041a47ec4082c6b31de9adec6635e 546 Gene3D G3DSA:3.40.50.300 3 285 1.8E-128 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS00460 709041a47ec4082c6b31de9adec6635e 546 Hamap MF_01227 CTP synthase [pyrG]. 6 543 49.59 T 11-11-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 SHALO_RS00460 709041a47ec4082c6b31de9adec6635e 546 Pfam PF06418 CTP synthase N-terminus 7 269 4.1E-121 T 11-11-2016 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 SHALO_RS09585 062c3c9a57f87913557d2a08ddd483d4 1036 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 2 1028 0.0 T 11-11-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 SHALO_RS09585 062c3c9a57f87913557d2a08ddd483d4 1036 SUPERFAMILY SSF82714 721 805 5.49E-20 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SHALO_RS09585 062c3c9a57f87913557d2a08ddd483d4 1036 SUPERFAMILY SSF82714 184 274 2.62E-21 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SHALO_RS09585 062c3c9a57f87913557d2a08ddd483d4 1036 SUPERFAMILY SSF82693 40 132 3.66E-22 T 11-11-2016 SHALO_RS09585 062c3c9a57f87913557d2a08ddd483d4 1036 Gene3D G3DSA:3.30.2090.10 720 804 3.1E-22 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SHALO_RS09585 062c3c9a57f87913557d2a08ddd483d4 1036 Gene3D G3DSA:1.10.3850.10 813 1027 3.3E-57 T 11-11-2016 SHALO_RS09585 062c3c9a57f87913557d2a08ddd483d4 1036 Gene3D G3DSA:1.10.3850.10 284 501 1.1E-56 T 11-11-2016 SHALO_RS09585 062c3c9a57f87913557d2a08ddd483d4 1036 Gene3D G3DSA:3.30.70.1430 40 138 2.3E-26 T 11-11-2016 SHALO_RS09585 062c3c9a57f87913557d2a08ddd483d4 1036 SUPERFAMILY SSF82866 805 1030 6.28E-45 T 11-11-2016 SHALO_RS09585 062c3c9a57f87913557d2a08ddd483d4 1036 SUPERFAMILY SSF82866 299 500 7.06E-49 T 11-11-2016 SHALO_RS09585 062c3c9a57f87913557d2a08ddd483d4 1036 SUPERFAMILY SSF82693 564 670 9.94E-20 T 11-11-2016 SHALO_RS09585 062c3c9a57f87913557d2a08ddd483d4 1036 Gene3D G3DSA:3.30.70.1430 566 670 1.2E-20 T 11-11-2016 SHALO_RS09585 062c3c9a57f87913557d2a08ddd483d4 1036 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 8.9E-90 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SHALO_RS09585 062c3c9a57f87913557d2a08ddd483d4 1036 PRINTS PR00702 Acriflavin resistance protein family signature 620 634 8.9E-90 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SHALO_RS09585 062c3c9a57f87913557d2a08ddd483d4 1036 PRINTS PR00702 Acriflavin resistance protein family signature 9 33 8.9E-90 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SHALO_RS09585 062c3c9a57f87913557d2a08ddd483d4 1036 PRINTS PR00702 Acriflavin resistance protein family signature 37 55 8.9E-90 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SHALO_RS09585 062c3c9a57f87913557d2a08ddd483d4 1036 PRINTS PR00702 Acriflavin resistance protein family signature 338 361 8.9E-90 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SHALO_RS09585 062c3c9a57f87913557d2a08ddd483d4 1036 PRINTS PR00702 Acriflavin resistance protein family signature 365 386 8.9E-90 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SHALO_RS09585 062c3c9a57f87913557d2a08ddd483d4 1036 PRINTS PR00702 Acriflavin resistance protein family signature 551 568 8.9E-90 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SHALO_RS09585 062c3c9a57f87913557d2a08ddd483d4 1036 PRINTS PR00702 Acriflavin resistance protein family signature 393 417 8.9E-90 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SHALO_RS09585 062c3c9a57f87913557d2a08ddd483d4 1036 PRINTS PR00702 Acriflavin resistance protein family signature 447 470 8.9E-90 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SHALO_RS09585 062c3c9a57f87913557d2a08ddd483d4 1036 SUPERFAMILY SSF82693 137 183 1.65E-20 T 11-11-2016 SHALO_RS09585 062c3c9a57f87913557d2a08ddd483d4 1036 SUPERFAMILY SSF82693 276 332 1.65E-20 T 11-11-2016 SHALO_RS09585 062c3c9a57f87913557d2a08ddd483d4 1036 Pfam PF00873 AcrB/AcrD/AcrF family 2 1025 0.0 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SHALO_RS09585 062c3c9a57f87913557d2a08ddd483d4 1036 Gene3D G3DSA:3.30.2090.10 183 276 4.6E-26 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SHALO_RS05270 3c2ecf3ee77a6d7ccaa9107f7e3956eb 1123 Pfam PF09899 Putative amidoligase enzyme (DUF2126) 276 1117 0.0 T 11-11-2016 IPR018667 Domain of unknown function DUF2126 SHALO_RS05270 3c2ecf3ee77a6d7ccaa9107f7e3956eb 1123 Pfam PF01841 Transglutaminase-like superfamily 133 245 3.8E-19 T 11-11-2016 IPR002931 Transglutaminase-like SHALO_RS05270 3c2ecf3ee77a6d7ccaa9107f7e3956eb 1123 SUPERFAMILY SSF54001 9 337 7.97E-71 T 11-11-2016 SHALO_RS05270 3c2ecf3ee77a6d7ccaa9107f7e3956eb 1123 Gene3D G3DSA:3.90.260.10 176 249 1.4E-12 T 11-11-2016 IPR002931 Transglutaminase-like SHALO_RS05270 3c2ecf3ee77a6d7ccaa9107f7e3956eb 1123 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 7 82 9.0E-27 T 11-11-2016 IPR013589 Bacterial transglutaminase-like, N-terminal SHALO_RS05270 3c2ecf3ee77a6d7ccaa9107f7e3956eb 1123 SMART SM00460 172 248 5.0E-24 T 11-11-2016 IPR002931 Transglutaminase-like SHALO_RS11480 f486b6f7555827d781acb78145d55764 191 Gene3D G3DSA:2.60.120.10 1 185 1.9E-77 T 11-11-2016 IPR014710 RmlC-like jelly roll fold SHALO_RS11480 f486b6f7555827d781acb78145d55764 191 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 178 2.0E-58 T 11-11-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 SHALO_RS11480 f486b6f7555827d781acb78145d55764 191 SUPERFAMILY SSF51182 1 186 2.58E-74 T 11-11-2016 IPR011051 RmlC-like cupin domain SHALO_RS11480 f486b6f7555827d781acb78145d55764 191 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 3 178 9.0E-73 T 11-11-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 SHALO_RS11480 f486b6f7555827d781acb78145d55764 191 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 7 178 1.1E-70 T 11-11-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 SHALO_RS07100 eb3a26c303e88222e49b9edb285bc72c 282 TIGRFAM TIGR00073 hypB: hydrogenase accessory protein HypB 72 279 1.9E-87 T 11-11-2016 IPR004392 Hydrogenase accessory protein HypB GO:0006461|GO:0016151 SHALO_RS07100 eb3a26c303e88222e49b9edb285bc72c 282 SUPERFAMILY SSF52540 66 275 1.47E-35 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS07100 eb3a26c303e88222e49b9edb285bc72c 282 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 99 258 3.2E-30 T 11-11-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain SHALO_RS07100 eb3a26c303e88222e49b9edb285bc72c 282 Gene3D G3DSA:3.40.50.300 99 190 1.2E-6 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS12670 2b52682339d20d0db1f8a01195730837 638 Pfam PF00593 TonB dependent receptor 402 637 1.0E-17 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SHALO_RS12670 2b52682339d20d0db1f8a01195730837 638 Gene3D G3DSA:2.170.130.10 1 133 6.0E-24 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SHALO_RS12670 2b52682339d20d0db1f8a01195730837 638 Pfam PF07715 TonB-dependent Receptor Plug Domain 13 124 5.0E-11 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SHALO_RS12670 2b52682339d20d0db1f8a01195730837 638 Gene3D G3DSA:2.40.170.20 134 638 4.7E-69 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SHALO_RS12670 2b52682339d20d0db1f8a01195730837 638 SUPERFAMILY SSF56935 1 638 7.69E-96 T 11-11-2016 SHALO_RS10270 47270333c1d01af1469bcf97377b5adf 259 SUPERFAMILY SSF89550 1 257 1.09E-50 T 11-11-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 SHALO_RS10270 47270333c1d01af1469bcf97377b5adf 259 Gene3D G3DSA:3.20.20.140 1 258 7.6E-46 T 11-11-2016 SHALO_RS10270 47270333c1d01af1469bcf97377b5adf 259 Pfam PF02811 PHP domain 4 188 3.0E-13 T 11-11-2016 IPR004013 PHP domain GO:0003824 SHALO_RS10270 47270333c1d01af1469bcf97377b5adf 259 TIGRFAM TIGR01856 hisJ_fam: histidinol phosphate phosphatase, HisJ family 3 232 2.5E-54 T 11-11-2016 IPR010140 Histidinol phosphate phosphatase, HisJ GO:0000105|GO:0004401 KEGG: 00340+3.1.3.15 SHALO_RS04510 a319228efb7b007fb4a07ccfb5ecb68b 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.2E-9 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SHALO_RS04510 a319228efb7b007fb4a07ccfb5ecb68b 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.2E-9 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SHALO_RS04510 a319228efb7b007fb4a07ccfb5ecb68b 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.2E-9 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SHALO_RS04510 a319228efb7b007fb4a07ccfb5ecb68b 299 Gene3D G3DSA:1.10.10.10 2 85 2.2E-24 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS04510 a319228efb7b007fb4a07ccfb5ecb68b 299 Gene3D G3DSA:3.40.190.10 172 274 7.8E-18 T 11-11-2016 SHALO_RS04510 a319228efb7b007fb4a07ccfb5ecb68b 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.2E-18 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SHALO_RS04510 a319228efb7b007fb4a07ccfb5ecb68b 299 Gene3D G3DSA:3.40.190.10 89 171 1.2E-14 T 11-11-2016 SHALO_RS04510 a319228efb7b007fb4a07ccfb5ecb68b 299 Pfam PF03466 LysR substrate binding domain 90 297 6.0E-33 T 11-11-2016 IPR005119 LysR, substrate-binding SHALO_RS04510 a319228efb7b007fb4a07ccfb5ecb68b 299 SUPERFAMILY SSF46785 2 85 6.35E-19 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS04510 a319228efb7b007fb4a07ccfb5ecb68b 299 SUPERFAMILY SSF53850 90 298 6.12E-31 T 11-11-2016 SHALO_RS04220 ef6a809a34f1f42ef1588950c88c3838 446 SUPERFAMILY SSF51735 1 136 2.17E-16 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS04220 ef6a809a34f1f42ef1588950c88c3838 446 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 3.2E-8 T 11-11-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 SHALO_RS04220 ef6a809a34f1f42ef1588950c88c3838 446 PRINTS PR00335 TrkA potassium uptake protein signature 18 32 3.2E-8 T 11-11-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 SHALO_RS04220 ef6a809a34f1f42ef1588950c88c3838 446 PRINTS PR00335 TrkA potassium uptake protein signature 71 85 3.2E-8 T 11-11-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 SHALO_RS04220 ef6a809a34f1f42ef1588950c88c3838 446 Gene3D G3DSA:3.40.50.720 1 132 3.6E-21 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS04220 ef6a809a34f1f42ef1588950c88c3838 446 Gene3D G3DSA:3.40.50.720 226 362 1.0E-16 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS04220 ef6a809a34f1f42ef1588950c88c3838 446 SUPERFAMILY SSF51735 228 357 7.72E-15 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS04220 ef6a809a34f1f42ef1588950c88c3838 446 Pfam PF02254 TrkA-N domain 3 102 9.4E-14 T 11-11-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 SHALO_RS04220 ef6a809a34f1f42ef1588950c88c3838 446 Pfam PF02254 TrkA-N domain 230 342 2.7E-9 T 11-11-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 SHALO_RS04700 bb6e95bd6fcd564cf0016e4ea2a1ac43 319 SUPERFAMILY SSF55729 178 299 3.31E-24 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase SHALO_RS04700 bb6e95bd6fcd564cf0016e4ea2a1ac43 319 Gene3D G3DSA:1.10.10.10 2 142 1.8E-22 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS04700 bb6e95bd6fcd564cf0016e4ea2a1ac43 319 Pfam PF00583 Acetyltransferase (GNAT) family 215 293 1.4E-14 T 11-11-2016 IPR000182 GNAT domain GO:0008080 SHALO_RS04700 bb6e95bd6fcd564cf0016e4ea2a1ac43 319 Pfam PF12802 MarR family 36 91 4.1E-8 T 11-11-2016 SHALO_RS04700 bb6e95bd6fcd564cf0016e4ea2a1ac43 319 Gene3D G3DSA:3.40.630.30 163 314 1.4E-29 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase SHALO_RS04700 bb6e95bd6fcd564cf0016e4ea2a1ac43 319 SMART SM00347 28 128 1.3E-7 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SHALO_RS04700 bb6e95bd6fcd564cf0016e4ea2a1ac43 319 SUPERFAMILY SSF46785 10 143 1.57E-20 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS12715 b971c886c1e5191cad7fd997fccb8f39 591 Gene3D G3DSA:1.20.1560.10 8 329 7.4E-39 T 11-11-2016 SHALO_RS12715 b971c886c1e5191cad7fd997fccb8f39 591 SUPERFAMILY SSF90123 3 329 2.22E-45 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SHALO_RS12715 b971c886c1e5191cad7fd997fccb8f39 591 Gene3D G3DSA:3.40.50.300 339 571 3.0E-77 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS12715 b971c886c1e5191cad7fd997fccb8f39 591 SUPERFAMILY SSF52540 332 574 8.56E-88 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS12715 b971c886c1e5191cad7fd997fccb8f39 591 Pfam PF00005 ABC transporter 358 506 2.8E-30 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_RS12715 b971c886c1e5191cad7fd997fccb8f39 591 Pfam PF00664 ABC transporter transmembrane region 22 292 3.6E-22 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SHALO_RS12715 b971c886c1e5191cad7fd997fccb8f39 591 SMART SM00382 366 552 6.6E-14 T 11-11-2016 IPR003593 AAA+ ATPase domain SHALO_RS12715 b971c886c1e5191cad7fd997fccb8f39 591 ProSitePatterns PS00211 ABC transporters family signature. 478 492 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHALO_RS14325 ab017a43736efa0bcd02bfe9bdf79430 68 Pfam PF02597 ThiS family 4 67 7.1E-11 T 11-11-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 Reactome: R-HSA-947581 SHALO_RS14325 ab017a43736efa0bcd02bfe9bdf79430 68 Gene3D G3DSA:3.10.20.30 1 67 1.6E-20 T 11-11-2016 IPR012675 Beta-grasp domain SHALO_RS14325 ab017a43736efa0bcd02bfe9bdf79430 68 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 3 67 5.7E-18 T 11-11-2016 IPR010035 ThiS, thiamine-biosynthesis SHALO_RS14325 ab017a43736efa0bcd02bfe9bdf79430 68 SUPERFAMILY SSF54285 1 67 5.09E-14 T 11-11-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp SHALO_RS02950 7ff12f578519055fadac03b9559ddff3 324 Gene3D G3DSA:3.40.50.620 8 168 5.1E-13 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHALO_RS02950 7ff12f578519055fadac03b9559ddff3 324 Pfam PF01171 PP-loop family 15 187 3.5E-53 T 11-11-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 SHALO_RS02950 7ff12f578519055fadac03b9559ddff3 324 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 3 269 19.476 T 11-11-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 SHALO_RS02950 7ff12f578519055fadac03b9559ddff3 324 SUPERFAMILY SSF52402 10 210 1.52E-45 T 11-11-2016 SHALO_RS02950 7ff12f578519055fadac03b9559ddff3 324 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 15 189 7.3E-49 T 11-11-2016 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 SHALO_RS02775 d80b693b03485a5868516e833ee182e6 358 SUPERFAMILY SSF51556 69 283 3.95E-8 T 11-11-2016 IPR032466 Metal-dependent hydrolase SHALO_RS02775 d80b693b03485a5868516e833ee182e6 358 Gene3D G3DSA:3.20.20.140 61 352 4.2E-10 T 11-11-2016 SHALO_RS11385 804319e0c15b350300a8ededbaf0a23c 168 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 5 43 2.3E-5 T 11-11-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal SHALO_RS11385 804319e0c15b350300a8ededbaf0a23c 168 PRINTS PR00162 Rieske 2Fe-2S subunit signature 94 105 1.1E-7 T 11-11-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 SHALO_RS11385 804319e0c15b350300a8ededbaf0a23c 168 PRINTS PR00162 Rieske 2Fe-2S subunit signature 127 139 1.1E-7 T 11-11-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 SHALO_RS11385 804319e0c15b350300a8ededbaf0a23c 168 PRINTS PR00162 Rieske 2Fe-2S subunit signature 115 127 1.1E-7 T 11-11-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 SHALO_RS11385 804319e0c15b350300a8ededbaf0a23c 168 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 6 152 5.2E-43 T 11-11-2016 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 SHALO_RS11385 804319e0c15b350300a8ededbaf0a23c 168 Pfam PF00355 Rieske [2Fe-2S] domain 51 142 2.2E-12 T 11-11-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 SHALO_RS11385 804319e0c15b350300a8ededbaf0a23c 168 Gene3D G3DSA:2.102.10.10 10 156 2.4E-35 T 11-11-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 SHALO_RS11385 804319e0c15b350300a8ededbaf0a23c 168 SUPERFAMILY SSF50022 29 161 1.06E-30 T 11-11-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 SHALO_RS12035 c92f6e724f5a91d8aae42ff219a008e0 369 Pfam PF00266 Aminotransferase class-V 2 320 3.7E-23 T 11-11-2016 IPR000192 Aminotransferase class V domain SHALO_RS12035 c92f6e724f5a91d8aae42ff219a008e0 369 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 175 195 - T 11-11-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site SHALO_RS12035 c92f6e724f5a91d8aae42ff219a008e0 369 Gene3D G3DSA:3.90.1150.10 249 351 1.8E-22 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SHALO_RS12035 c92f6e724f5a91d8aae42ff219a008e0 369 SUPERFAMILY SSF53383 2 350 1.78E-76 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase SHALO_RS12035 c92f6e724f5a91d8aae42ff219a008e0 369 PIRSF PIRSF000524 1 368 1.0E-95 T 11-11-2016 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661 SHALO_RS12035 c92f6e724f5a91d8aae42ff219a008e0 369 Gene3D G3DSA:3.40.640.10 13 248 8.4E-40 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SHALO_RS03515 052e50270812499e599fa2aee2873085 460 Gene3D G3DSA:1.10.1060.10 2 144 5.5E-37 T 11-11-2016 SHALO_RS03515 052e50270812499e599fa2aee2873085 460 Gene3D G3DSA:3.50.50.60 232 393 1.6E-42 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHALO_RS03515 052e50270812499e599fa2aee2873085 460 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 20 128 6.7E-31 T 11-11-2016 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 SHALO_RS03515 052e50270812499e599fa2aee2873085 460 Gene3D G3DSA:3.40.50.720 145 231 6.3E-34 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS03515 052e50270812499e599fa2aee2873085 460 Gene3D G3DSA:3.40.50.720 397 458 6.3E-34 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS03515 052e50270812499e599fa2aee2873085 460 SUPERFAMILY SSF51971 140 393 3.41E-64 T 11-11-2016 SHALO_RS03515 052e50270812499e599fa2aee2873085 460 SUPERFAMILY SSF46548 4 152 2.09E-31 T 11-11-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 SHALO_RS03515 052e50270812499e599fa2aee2873085 460 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 142 447 7.7E-31 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHALO_RS03515 052e50270812499e599fa2aee2873085 460 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 3 457 1.3E-167 T 11-11-2016 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 SHALO_RS03515 052e50270812499e599fa2aee2873085 460 PRINTS PR00419 Adrenodoxin reductase family signature 208 218 7.4E-30 T 11-11-2016 SHALO_RS03515 052e50270812499e599fa2aee2873085 460 PRINTS PR00419 Adrenodoxin reductase family signature 316 329 7.4E-30 T 11-11-2016 SHALO_RS03515 052e50270812499e599fa2aee2873085 460 PRINTS PR00419 Adrenodoxin reductase family signature 143 165 7.4E-30 T 11-11-2016 SHALO_RS03515 052e50270812499e599fa2aee2873085 460 PRINTS PR00419 Adrenodoxin reductase family signature 166 179 7.4E-30 T 11-11-2016 SHALO_RS03515 052e50270812499e599fa2aee2873085 460 PRINTS PR00419 Adrenodoxin reductase family signature 282 296 7.4E-30 T 11-11-2016 SHALO_RS15150 6c5c24d29ce9a1163affba073e8a6b6f 560 SUPERFAMILY SSF117143 84 138 1.31E-39 T 11-11-2016 SHALO_RS15150 6c5c24d29ce9a1163affba073e8a6b6f 560 SUPERFAMILY SSF117143 297 520 1.31E-39 T 11-11-2016 SHALO_RS15150 6c5c24d29ce9a1163affba073e8a6b6f 560 SUPERFAMILY SSF117143 168 210 1.31E-39 T 11-11-2016 SHALO_RS15150 6c5c24d29ce9a1163affba073e8a6b6f 560 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 477 558 1.6E-16 T 11-11-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain SHALO_RS15150 6c5c24d29ce9a1163affba073e8a6b6f 560 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 275 540 5.7E-26 T 11-11-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G SHALO_RS15150 6c5c24d29ce9a1163affba073e8a6b6f 560 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 3 258 4.6E-36 T 11-11-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G SHALO_RS15150 6c5c24d29ce9a1163affba073e8a6b6f 560 Pfam PF00460 Flagella basal body rod protein 5 35 2.1E-5 T 11-11-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 SHALO_RS10285 326ac59c44c170522e2c494d075b24b8 231 SMART SM00382 24 213 2.9E-10 T 11-11-2016 IPR003593 AAA+ ATPase domain SHALO_RS10285 326ac59c44c170522e2c494d075b24b8 231 Gene3D G3DSA:3.40.50.300 14 222 1.4E-50 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS10285 326ac59c44c170522e2c494d075b24b8 231 Pfam PF00005 ABC transporter 21 147 2.5E-19 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_RS10285 326ac59c44c170522e2c494d075b24b8 231 SUPERFAMILY SSF52540 21 221 8.43E-45 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS10285 326ac59c44c170522e2c494d075b24b8 231 ProSitePatterns PS00211 ABC transporters family signature. 120 134 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHALO_RS12445 fef2e3a7543daa9796f06d9550169021 150 TIGRFAM TIGR04488 SoxY_true_GGCGG: thiosulfate oxidation carrier protein SoxY 2 150 9.9E-46 T 11-11-2016 IPR016568 Sulphur oxidation, SoxY SHALO_RS12445 fef2e3a7543daa9796f06d9550169021 150 PIRSF PIRSF010312 1 150 1.5E-44 T 11-11-2016 IPR016568 Sulphur oxidation, SoxY SHALO_RS12445 fef2e3a7543daa9796f06d9550169021 150 Pfam PF13501 Sulfur oxidation protein SoxY 45 148 2.5E-34 T 11-11-2016 IPR032711 Ig-like SoxY domain SHALO_RS13350 0a90ad3cb8fd4ceb119560fd632946cd 338 Pfam PF01032 FecCD transport family 14 330 3.6E-76 T 11-11-2016 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 SHALO_RS13350 0a90ad3cb8fd4ceb119560fd632946cd 338 Gene3D G3DSA:1.10.3470.10 3 335 1.1E-89 T 11-11-2016 IPR029022 ABC transporter, BtuC-like SHALO_RS13350 0a90ad3cb8fd4ceb119560fd632946cd 338 SUPERFAMILY SSF81345 5 330 5.23E-68 T 11-11-2016 IPR029022 ABC transporter, BtuC-like SHALO_RS12955 cde56a5750668d5bbf5d826c6da24a94 220 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 51 220 5.0E-20 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHALO_RS12955 cde56a5750668d5bbf5d826c6da24a94 220 Gene3D G3DSA:1.10.3720.10 13 219 7.8E-36 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHALO_RS12955 cde56a5750668d5bbf5d826c6da24a94 220 SUPERFAMILY SSF161098 14 206 9.42E-40 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHALO_RS08820 eec4c43f657331da2dcc1daad6c9d830 454 Gene3D G3DSA:3.90.970.10 401 434 1.9E-4 T 11-11-2016 IPR014714 Glutamate mutase E subunit, C-terminal domain GO:0016866|GO:0019670|GO:0031419 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728 SHALO_RS08820 eec4c43f657331da2dcc1daad6c9d830 454 Gene3D G3DSA:3.20.20.240 3 400 6.9E-144 T 11-11-2016 IPR014348 Cobalamin (vitamin B12)-dependent enzyme, catalytic subdomain GO:0008152|GO:0016866|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 SHALO_RS08820 eec4c43f657331da2dcc1daad6c9d830 454 SUPERFAMILY SSF51703 3 453 7.06E-156 T 11-11-2016 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0008152|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 SHALO_RS08820 eec4c43f657331da2dcc1daad6c9d830 454 Pfam PF06368 Methylaspartate mutase E chain (MutE) 42 434 6.9E-120 T 11-11-2016 IPR006396 Glutamate mutase epsilon subunit GO:0019670|GO:0050097 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728 SHALO_RS08820 eec4c43f657331da2dcc1daad6c9d830 454 PIRSF PIRSF001495 2 451 1.0E-118 T 11-11-2016 IPR006396 Glutamate mutase epsilon subunit GO:0019670|GO:0050097 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728 SHALO_RS11035 60f27d6397bc7390f69477e8c028c812 780 SUPERFAMILY SSF48452 441 494 5.18E-16 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SHALO_RS11035 60f27d6397bc7390f69477e8c028c812 780 SUPERFAMILY SSF48452 274 376 5.18E-16 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SHALO_RS11035 60f27d6397bc7390f69477e8c028c812 780 Pfam PF13432 Tetratricopeptide repeat 111 167 4.7E-5 T 11-11-2016 SHALO_RS11035 60f27d6397bc7390f69477e8c028c812 780 SUPERFAMILY SSF48452 103 188 1.25E-9 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SHALO_RS11035 60f27d6397bc7390f69477e8c028c812 780 SMART SM00028 140 171 4.1 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SHALO_RS11035 60f27d6397bc7390f69477e8c028c812 780 SMART SM00028 106 139 19.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SHALO_RS11035 60f27d6397bc7390f69477e8c028c812 780 SMART SM00028 458 491 2.5E-4 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SHALO_RS11035 60f27d6397bc7390f69477e8c028c812 780 SMART SM00028 271 304 0.18 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SHALO_RS11035 60f27d6397bc7390f69477e8c028c812 780 Gene3D G3DSA:1.25.40.10 103 208 3.3E-17 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SHALO_RS11035 60f27d6397bc7390f69477e8c028c812 780 Gene3D G3DSA:1.25.40.10 274 365 3.3E-17 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SHALO_RS11035 60f27d6397bc7390f69477e8c028c812 780 Pfam PF13181 Tetratricopeptide repeat 274 303 0.016 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SHALO_RS11035 60f27d6397bc7390f69477e8c028c812 780 Pfam PF13181 Tetratricopeptide repeat 461 490 0.02 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SHALO_RS11035 60f27d6397bc7390f69477e8c028c812 780 SUPERFAMILY SSF48452 667 764 1.69E-9 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SHALO_RS11035 60f27d6397bc7390f69477e8c028c812 780 SUPERFAMILY SSF48452 439 489 1.69E-9 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SHALO_RS11035 60f27d6397bc7390f69477e8c028c812 780 Gene3D G3DSA:1.25.40.10 667 762 1.9E-15 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SHALO_RS11035 60f27d6397bc7390f69477e8c028c812 780 Gene3D G3DSA:1.25.40.10 442 489 1.9E-15 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SHALO_RS12320 10ba5c060e846182d8782335b7bbcd52 348 Gene3D G3DSA:1.25.40.10 59 167 2.5E-12 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SHALO_RS12320 10ba5c060e846182d8782335b7bbcd52 348 Pfam PF13176 Tetratricopeptide repeat 73 96 0.0055 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SHALO_RS12320 10ba5c060e846182d8782335b7bbcd52 348 SUPERFAMILY SSF48452 60 165 1.43E-11 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SHALO_RS02460 40309a6b6b87164b64ed112ff30653b1 319 Gene3D G3DSA:3.30.70.260 232 315 2.2E-16 T 11-11-2016 SHALO_RS02460 40309a6b6b87164b64ed112ff30653b1 319 Gene3D G3DSA:3.40.50.300 1 231 1.0E-78 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS02460 40309a6b6b87164b64ed112ff30653b1 319 SMART SM00382 26 222 7.9E-15 T 11-11-2016 IPR003593 AAA+ ATPase domain SHALO_RS02460 40309a6b6b87164b64ed112ff30653b1 319 Pfam PF00005 ABC transporter 17 165 5.7E-34 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_RS02460 40309a6b6b87164b64ed112ff30653b1 319 Pfam PF09383 NIL domain 248 311 4.5E-15 T 11-11-2016 IPR018449 NIL domain SHALO_RS02460 40309a6b6b87164b64ed112ff30653b1 319 SUPERFAMILY SSF55021 231 313 3.55E-16 T 11-11-2016 SHALO_RS02460 40309a6b6b87164b64ed112ff30653b1 319 SUPERFAMILY SSF52540 1 235 1.39E-76 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS02460 40309a6b6b87164b64ed112ff30653b1 319 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHALO_RS02460 40309a6b6b87164b64ed112ff30653b1 319 SMART SM00930 245 319 7.6E-18 T 11-11-2016 IPR018449 NIL domain SHALO_RS14570 47005687b366451600598119f46111b0 390 SMART SM00359 2 86 3.7E-11 T 11-11-2016 IPR002478 PUA domain GO:0003723 SHALO_RS14570 47005687b366451600598119f46111b0 390 Gene3D G3DSA:3.30.750.80 72 173 3.4E-35 T 11-11-2016 SHALO_RS14570 47005687b366451600598119f46111b0 390 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 164 353 2.1E-17 T 11-11-2016 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 SHALO_RS14570 47005687b366451600598119f46111b0 390 SUPERFAMILY SSF53335 77 373 4.72E-58 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS14570 47005687b366451600598119f46111b0 390 SUPERFAMILY SSF88697 2 72 1.19E-12 T 11-11-2016 IPR015947 PUA-like domain SHALO_RS14570 47005687b366451600598119f46111b0 390 Gene3D G3DSA:2.30.130.10 3 71 6.5E-17 T 11-11-2016 IPR015947 PUA-like domain SHALO_RS14570 47005687b366451600598119f46111b0 390 Gene3D G3DSA:3.40.50.150 179 388 8.1E-51 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS05010 66869571178ae669740f0da979c6c8ea 236 Gene3D G3DSA:3.30.70.980 134 201 3.3E-27 T 11-11-2016 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_RS05010 66869571178ae669740f0da979c6c8ea 236 Gene3D G3DSA:1.10.10.200 1 77 2.5E-27 T 11-11-2016 IPR017856 Integrase, N-terminal zinc-binding domain-like SHALO_RS05010 66869571178ae669740f0da979c6c8ea 236 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 2 235 2.0E-73 T 11-11-2016 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_RS05010 66869571178ae669740f0da979c6c8ea 236 SUPERFAMILY SSF75625 1 235 6.67E-74 T 11-11-2016 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_RS05010 66869571178ae669740f0da979c6c8ea 236 Gene3D G3DSA:3.30.1270.10 210 235 1.5E-29 T 11-11-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_RS05010 66869571178ae669740f0da979c6c8ea 236 Gene3D G3DSA:3.30.1270.10 80 133 1.5E-29 T 11-11-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_RS05010 66869571178ae669740f0da979c6c8ea 236 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 1 236 26.009 T 11-11-2016 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_RS05010 66869571178ae669740f0da979c6c8ea 236 Pfam PF01709 Transcriptional regulator 5 235 4.9E-73 T 11-11-2016 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_RS11275 8f1a96b5778f710256c1d7e7d58e8e89 168 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 3 141 9.1E-37 T 11-11-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 SHALO_RS11275 8f1a96b5778f710256c1d7e7d58e8e89 168 PIRSF PIRSF004682 1 162 1.7E-62 T 11-11-2016 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 SHALO_RS11275 8f1a96b5778f710256c1d7e7d58e8e89 168 SUPERFAMILY SSF56784 1 151 1.65E-42 T 11-11-2016 IPR023214 HAD-like domain SHALO_RS11275 8f1a96b5778f710256c1d7e7d58e8e89 168 Pfam PF13242 HAD-hyrolase-like 99 141 5.0E-10 T 11-11-2016 SHALO_RS11275 8f1a96b5778f710256c1d7e7d58e8e89 168 TIGRFAM TIGR00213 GmhB_yaeD: D,D-heptose 1,7-bisphosphate phosphatase 3 148 2.7E-57 T 11-11-2016 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 SHALO_RS11275 8f1a96b5778f710256c1d7e7d58e8e89 168 Gene3D G3DSA:3.40.50.1000 1 154 1.1E-53 T 11-11-2016 IPR023214 HAD-like domain SHALO_RS11275 8f1a96b5778f710256c1d7e7d58e8e89 168 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 3 143 5.8E-43 T 11-11-2016 IPR006543 Histidinol-phosphate phosphatase GO:0016791 SHALO_RS08365 ebec717566bd0986816e784f3082bc75 305 Gene3D G3DSA:3.40.710.10 3 305 5.0E-117 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like SHALO_RS08365 ebec717566bd0986816e784f3082bc75 305 TIGRFAM TIGR03814 Gln_ase: glutaminase A 8 305 8.3E-124 T 11-11-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 SHALO_RS08365 ebec717566bd0986816e784f3082bc75 305 Pfam PF04960 Glutaminase 22 305 9.6E-112 T 11-11-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 SHALO_RS08365 ebec717566bd0986816e784f3082bc75 305 SUPERFAMILY SSF56601 3 305 8.09E-105 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like SHALO_RS08365 ebec717566bd0986816e784f3082bc75 305 Hamap MF_00313 Glutaminase [glsA]. 4 305 44.489 T 11-11-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 SHALO_RS06115 6736b25764a5aca989fbfbbc24da45ee 171 SUPERFAMILY SSF52218 3 170 1.42E-37 T 11-11-2016 IPR029039 Flavoprotein-like domain SHALO_RS06115 6736b25764a5aca989fbfbbc24da45ee 171 Pfam PF00258 Flavodoxin 6 163 1.1E-21 T 11-11-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 SHALO_RS06115 6736b25764a5aca989fbfbbc24da45ee 171 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 11-11-2016 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 SHALO_RS06115 6736b25764a5aca989fbfbbc24da45ee 171 PIRSF PIRSF038996 1 171 2.0E-47 T 11-11-2016 IPR010086 Flavodoxin, long chain GO:0010181 SHALO_RS06115 6736b25764a5aca989fbfbbc24da45ee 171 Gene3D G3DSA:3.40.50.360 3 170 6.1E-43 T 11-11-2016 IPR029039 Flavoprotein-like domain SHALO_RS06115 6736b25764a5aca989fbfbbc24da45ee 171 TIGRFAM TIGR01752 flav_long: flavodoxin 3 170 2.6E-44 T 11-11-2016 IPR010086 Flavodoxin, long chain GO:0010181 SHALO_RS10955 25d72236379c71ea44ae5d8cf5366db0 828 SUPERFAMILY SSF82866 211 413 3.4E-22 T 11-11-2016 SHALO_RS10955 25d72236379c71ea44ae5d8cf5366db0 828 Pfam PF03176 MMPL family 472 785 1.7E-4 T 11-11-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 SHALO_RS10955 25d72236379c71ea44ae5d8cf5366db0 828 Pfam PF03176 MMPL family 212 411 1.6E-6 T 11-11-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 SHALO_RS10955 25d72236379c71ea44ae5d8cf5366db0 828 SUPERFAMILY SSF82866 598 819 1.57E-26 T 11-11-2016 SHALO_RS10955 25d72236379c71ea44ae5d8cf5366db0 828 Gene3D G3DSA:1.20.1640.10 625 824 4.9E-25 T 11-11-2016 SHALO_RS10955 25d72236379c71ea44ae5d8cf5366db0 828 Gene3D G3DSA:1.20.1640.10 246 414 2.2E-20 T 11-11-2016 SHALO_RS07680 755c3321f7cf82cca1b4260a472129d1 330 SUPERFAMILY SSF159664 197 324 2.22E-28 T 11-11-2016 IPR002750 CobE/GbiG C-terminal domain GO:0009236 SHALO_RS07680 755c3321f7cf82cca1b4260a472129d1 330 Pfam PF11761 Cobalamin biosynthesis central region 134 190 6.5E-6 T 11-11-2016 IPR021745 Cobalamin biosynthesis central region KEGG: 00860+3.7.1.12|MetaCyc: PWY-7377 SHALO_RS07680 755c3321f7cf82cca1b4260a472129d1 330 Gene3D G3DSA:3.30.420.180 196 325 7.3E-35 T 11-11-2016 IPR002750 CobE/GbiG C-terminal domain GO:0009236 SHALO_RS07680 755c3321f7cf82cca1b4260a472129d1 330 Pfam PF11760 Cobalamin synthesis G N-terminal 50 129 5.1E-32 T 11-11-2016 IPR021744 Cobalamin synthesis G, N-terminal KEGG: 00860+3.7.1.12|MetaCyc: PWY-7377 SHALO_RS07680 755c3321f7cf82cca1b4260a472129d1 330 SUPERFAMILY SSF159672 3 210 3.66E-51 T 11-11-2016 SHALO_RS07680 755c3321f7cf82cca1b4260a472129d1 330 Pfam PF01890 Cobalamin synthesis G C-terminus 203 321 5.9E-24 T 11-11-2016 IPR002750 CobE/GbiG C-terminal domain GO:0009236 SHALO_RS06395 a5480a63e940223dfdb9876d346ce17e 484 TIGRFAM TIGR01282 nifD: nitrogenase molybdenum-iron protein alpha chain 14 481 4.9E-247 T 11-11-2016 IPR005972 Nitrogenase molybdenum-iron protein alpha chain GO:0009399|GO:0016163|GO:0016612|GO:0055114 KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 SHALO_RS06395 a5480a63e940223dfdb9876d346ce17e 484 Gene3D G3DSA:3.40.50.1980 215 320 9.7E-51 T 11-11-2016 SHALO_RS06395 a5480a63e940223dfdb9876d346ce17e 484 TIGRFAM TIGR01862 N2-ase-Ialpha: nitrogenase component I, alpha chain 29 475 3.7E-181 T 11-11-2016 IPR010143 Nitrogenase component 1, alpha chain GO:0009399|GO:0016163|GO:0051536|GO:0055114 KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 SHALO_RS06395 a5480a63e940223dfdb9876d346ce17e 484 ProSitePatterns PS00090 Nitrogenases component 1 alpha and beta subunits signature 2. 154 168 - T 11-11-2016 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 SHALO_RS06395 a5480a63e940223dfdb9876d346ce17e 484 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 64 468 1.3E-107 T 11-11-2016 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 SHALO_RS06395 a5480a63e940223dfdb9876d346ce17e 484 Gene3D G3DSA:3.40.50.1980 12 168 5.7E-64 T 11-11-2016 SHALO_RS06395 a5480a63e940223dfdb9876d346ce17e 484 Gene3D G3DSA:3.40.50.1980 347 483 1.0E-61 T 11-11-2016 SHALO_RS06395 a5480a63e940223dfdb9876d346ce17e 484 ProSitePatterns PS00699 Nitrogenases component 1 alpha and beta subunits signature 1. 83 90 - T 11-11-2016 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 SHALO_RS06395 a5480a63e940223dfdb9876d346ce17e 484 SUPERFAMILY SSF53807 40 481 1.84E-156 T 11-11-2016 SHALO_RS02595 86b42b22d792ea93569cad94f1d3f745 159 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 16 157 1.9E-51 T 11-11-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS02595 86b42b22d792ea93569cad94f1d3f745 159 SUPERFAMILY SSF52833 6 157 9.28E-51 T 11-11-2016 IPR012336 Thioredoxin-like fold SHALO_RS02595 86b42b22d792ea93569cad94f1d3f745 159 Gene3D G3DSA:3.40.30.10 78 156 2.0E-8 T 11-11-2016 IPR012336 Thioredoxin-like fold SHALO_RS02595 86b42b22d792ea93569cad94f1d3f745 159 PIRSF PIRSF000216 1 159 1.0E-59 T 11-11-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS02595 86b42b22d792ea93569cad94f1d3f745 159 ProSitePatterns PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. 115 133 - T 11-11-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS02595 86b42b22d792ea93569cad94f1d3f745 159 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 16 157 1.8E-54 T 11-11-2016 SHALO_RS14465 81c5d7195383605874f507e38d841a0a 460 SMART SM00448 1 114 4.4E-19 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS14465 81c5d7195383605874f507e38d841a0a 460 SMART SM00382 158 305 6.2E-6 T 11-11-2016 IPR003593 AAA+ ATPase domain SHALO_RS14465 81c5d7195383605874f507e38d841a0a 460 Gene3D G3DSA:3.40.50.2300 1 129 1.8E-22 T 11-11-2016 SHALO_RS14465 81c5d7195383605874f507e38d841a0a 460 Gene3D G3DSA:3.40.50.300 136 310 1.6E-49 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS14465 81c5d7195383605874f507e38d841a0a 460 SUPERFAMILY SSF52540 138 381 8.11E-62 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS14465 81c5d7195383605874f507e38d841a0a 460 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 162 175 - T 11-11-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 SHALO_RS14465 81c5d7195383605874f507e38d841a0a 460 SUPERFAMILY SSF52172 1 182 1.08E-24 T 11-11-2016 IPR011006 CheY-like superfamily SHALO_RS14465 81c5d7195383605874f507e38d841a0a 460 Pfam PF00072 Response regulator receiver domain 3 113 8.9E-17 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS14465 81c5d7195383605874f507e38d841a0a 460 Pfam PF00158 Sigma-54 interaction domain 139 304 1.1E-63 T 11-11-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 SHALO_RS14465 81c5d7195383605874f507e38d841a0a 460 Gene3D G3DSA:1.10.8.60 311 381 2.8E-21 T 11-11-2016 SHALO_RS06985 00d29f7d650b59d9ddd242841ac455ca 247 Pfam PF00813 FliP family 50 242 7.2E-80 T 11-11-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 SHALO_RS06985 00d29f7d650b59d9ddd242841ac455ca 247 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 223 235 - T 11-11-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 SHALO_RS06985 00d29f7d650b59d9ddd242841ac455ca 247 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 50 246 6.8E-86 T 11-11-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 SHALO_RS06985 00d29f7d650b59d9ddd242841ac455ca 247 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 146 158 1.3E-22 T 11-11-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 SHALO_RS06985 00d29f7d650b59d9ddd242841ac455ca 247 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 118 132 1.3E-22 T 11-11-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 SHALO_RS06985 00d29f7d650b59d9ddd242841ac455ca 247 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 168 180 1.3E-22 T 11-11-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 SHALO_RS06985 00d29f7d650b59d9ddd242841ac455ca 247 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 46 55 1.3E-22 T 11-11-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 SHALO_RS06985 00d29f7d650b59d9ddd242841ac455ca 247 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 236 246 1.3E-22 T 11-11-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 SHALO_RS06985 00d29f7d650b59d9ddd242841ac455ca 247 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 106 118 1.3E-22 T 11-11-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 SHALO_RS06985 00d29f7d650b59d9ddd242841ac455ca 247 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 196 217 1.8E-66 T 11-11-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 SHALO_RS06985 00d29f7d650b59d9ddd242841ac455ca 247 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 220 245 1.8E-66 T 11-11-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 SHALO_RS06985 00d29f7d650b59d9ddd242841ac455ca 247 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 175 195 1.8E-66 T 11-11-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 SHALO_RS06985 00d29f7d650b59d9ddd242841ac455ca 247 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 48 67 1.8E-66 T 11-11-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 SHALO_RS06985 00d29f7d650b59d9ddd242841ac455ca 247 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 67 87 1.8E-66 T 11-11-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 SHALO_RS06985 00d29f7d650b59d9ddd242841ac455ca 247 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 87 106 1.8E-66 T 11-11-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 SHALO_RS06985 00d29f7d650b59d9ddd242841ac455ca 247 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 175 190 - T 11-11-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 SHALO_RS04005 7419806044f05ba62d4953448e925a33 525 SUPERFAMILY SSF53795 213 524 1.56E-133 T 11-11-2016 SHALO_RS04005 7419806044f05ba62d4953448e925a33 525 Gene3D G3DSA:3.90.228.20 213 274 2.6E-124 T 11-11-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 SHALO_RS04005 7419806044f05ba62d4953448e925a33 525 Gene3D G3DSA:3.90.228.20 334 524 2.6E-124 T 11-11-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 SHALO_RS04005 7419806044f05ba62d4953448e925a33 525 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 249 264 - T 11-11-2016 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 SHALO_RS04005 7419806044f05ba62d4953448e925a33 525 PIRSF PIRSF006294 1 525 1.9E-237 T 11-11-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 SHALO_RS04005 7419806044f05ba62d4953448e925a33 525 Hamap MF_00453 Phosphoenolpyruvate carboxykinase [ATP] [pckA]. 11 525 55.238 T 11-11-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 SHALO_RS04005 7419806044f05ba62d4953448e925a33 525 Gene3D G3DSA:3.40.449.10 17 210 4.3E-76 T 11-11-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 SHALO_RS04005 7419806044f05ba62d4953448e925a33 525 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 5 525 1.8E-233 T 11-11-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 SHALO_RS04005 7419806044f05ba62d4953448e925a33 525 Pfam PF01293 Phosphoenolpyruvate carboxykinase 17 479 4.4E-219 T 11-11-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 SHALO_RS04005 7419806044f05ba62d4953448e925a33 525 SUPERFAMILY SSF68923 5 211 8.72E-79 T 11-11-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 SHALO_RS00835 6042a649cb369b39090da8eb44ca9ad6 221 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 219 4.8E-15 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS00835 6042a649cb369b39090da8eb44ca9ad6 221 SMART SM00448 3 114 1.2E-34 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS00835 6042a649cb369b39090da8eb44ca9ad6 221 SUPERFAMILY SSF52172 3 176 4.41E-36 T 11-11-2016 IPR011006 CheY-like superfamily SHALO_RS00835 6042a649cb369b39090da8eb44ca9ad6 221 Gene3D G3DSA:3.40.50.2300 2 122 1.7E-34 T 11-11-2016 SHALO_RS00835 6042a649cb369b39090da8eb44ca9ad6 221 Gene3D G3DSA:1.10.10.10 135 220 1.1E-19 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS00835 6042a649cb369b39090da8eb44ca9ad6 221 SMART SM00862 148 219 5.4E-15 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS00835 6042a649cb369b39090da8eb44ca9ad6 221 Pfam PF00072 Response regulator receiver domain 5 114 1.5E-25 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS06410 5c8a976ad0c87271b4cfbd295259329a 349 SUPERFAMILY SSF55874 211 343 8.12E-23 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS06410 5c8a976ad0c87271b4cfbd295259329a 349 SMART SM00387 247 347 2.3E-17 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS06410 5c8a976ad0c87271b4cfbd295259329a 349 Gene3D G3DSA:3.30.565.10 210 343 2.1E-22 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS06410 5c8a976ad0c87271b4cfbd295259329a 349 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 248 347 3.5E-14 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS06410 5c8a976ad0c87271b4cfbd295259329a 349 Gene3D G3DSA:1.10.287.130 147 200 7.5E-5 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS06410 5c8a976ad0c87271b4cfbd295259329a 349 SUPERFAMILY SSF47384 138 200 1.26E-5 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS01810 20336cff05d8bd1759e21706f724597c 867 TIGRFAM TIGR04246 nitrous_NosZ_Gp: nitrous-oxide reductase, Sec-dependent 48 645 1.4E-264 T 11-11-2016 IPR026468 Nitrous-oxide reductase, Sec-dependent SHALO_RS01810 20336cff05d8bd1759e21706f724597c 867 SUPERFAMILY SSF46626 761 861 3.15E-17 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS01810 20336cff05d8bd1759e21706f724597c 867 Pfam PF13473 Cupredoxin-like domain 555 630 1.4E-7 T 11-11-2016 IPR028096 EfeO-type cupredoxin-like domain SHALO_RS01810 20336cff05d8bd1759e21706f724597c 867 Gene3D G3DSA:2.130.10.10 97 527 9.0E-114 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 SHALO_RS01810 20336cff05d8bd1759e21706f724597c 867 Gene3D G3DSA:1.10.760.10 773 859 1.3E-15 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS01810 20336cff05d8bd1759e21706f724597c 867 SUPERFAMILY SSF50974 52 518 2.75E-88 T 11-11-2016 IPR011045 Nitrous oxide reductase, N-terminal Reactome: R-HSA-114608 SHALO_RS01810 20336cff05d8bd1759e21706f724597c 867 Gene3D G3DSA:2.60.40.420 538 643 4.5E-39 T 11-11-2016 IPR008972 Cupredoxin SHALO_RS01810 20336cff05d8bd1759e21706f724597c 867 SUPERFAMILY SSF49503 479 657 8.84E-27 T 11-11-2016 IPR008972 Cupredoxin SHALO_RS01810 20336cff05d8bd1759e21706f724597c 867 Pfam PF00034 Cytochrome c 772 860 2.4E-7 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS00470 ebe2b1438c34f57b705d37877377d24b 219 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 140 155 - T 11-11-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 SHALO_RS00470 ebe2b1438c34f57b705d37877377d24b 219 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 14 218 2.2E-62 T 11-11-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 SHALO_RS00470 ebe2b1438c34f57b705d37877377d24b 219 SUPERFAMILY SSF53335 28 217 6.29E-37 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS00470 ebe2b1438c34f57b705d37877377d24b 219 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 16 217 6.5E-54 T 11-11-2016 SHALO_RS00470 ebe2b1438c34f57b705d37877377d24b 219 Gene3D G3DSA:3.40.50.150 30 217 2.0E-52 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS04035 c619781fe9a6251799bcb6de5060e71e 277 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 275 1.7E-94 T 11-11-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 SHALO_RS04035 c619781fe9a6251799bcb6de5060e71e 277 Pfam PF02401 LytB protein 3 272 2.7E-86 T 11-11-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 SHALO_RS04035 c619781fe9a6251799bcb6de5060e71e 277 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 276 31.832 T 11-11-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 SHALO_RS12225 a96a5b7514de6665ac6e9c8d6a50518b 204 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 25 201 1.4E-61 T 11-11-2016 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS12225 a96a5b7514de6665ac6e9c8d6a50518b 204 SUPERFAMILY SSF52166 2 201 1.44E-58 T 11-11-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 SHALO_RS12225 a96a5b7514de6665ac6e9c8d6a50518b 204 Gene3D G3DSA:3.40.1370.10 56 201 1.8E-45 T 11-11-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 SHALO_RS12225 a96a5b7514de6665ac6e9c8d6a50518b 204 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 9 204 26.716 T 11-11-2016 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS12225 a96a5b7514de6665ac6e9c8d6a50518b 204 Pfam PF00573 Ribosomal protein L4/L1 family 23 202 9.4E-54 T 11-11-2016 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 SHALO_RS03965 7c98ea2c70e123995fb66840b0567f03 728 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 616 718 9.4E-15 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS03965 7c98ea2c70e123995fb66840b0567f03 728 PRINTS PR00344 Bacterial sensor protein C-terminal signature 654 668 1.1E-6 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS03965 7c98ea2c70e123995fb66840b0567f03 728 PRINTS PR00344 Bacterial sensor protein C-terminal signature 683 701 1.1E-6 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS03965 7c98ea2c70e123995fb66840b0567f03 728 PRINTS PR00344 Bacterial sensor protein C-terminal signature 672 682 1.1E-6 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS03965 7c98ea2c70e123995fb66840b0567f03 728 SUPERFAMILY SSF55785 360 484 4.01E-16 T 11-11-2016 IPR000014 PAS domain SHALO_RS03965 7c98ea2c70e123995fb66840b0567f03 728 SMART SM00387 614 722 1.2E-16 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS03965 7c98ea2c70e123995fb66840b0567f03 728 SUPERFAMILY SSF47384 495 570 8.83E-5 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS03965 7c98ea2c70e123995fb66840b0567f03 728 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 372 492 4.4E-8 T 11-11-2016 IPR000014 PAS domain SHALO_RS03965 7c98ea2c70e123995fb66840b0567f03 728 Gene3D G3DSA:3.30.450.20 360 484 1.1E-16 T 11-11-2016 SHALO_RS03965 7c98ea2c70e123995fb66840b0567f03 728 Gene3D G3DSA:3.30.565.10 572 721 5.9E-26 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS03965 7c98ea2c70e123995fb66840b0567f03 728 Pfam PF04392 ABC transporter substrate binding protein 82 294 1.9E-8 T 11-11-2016 IPR007487 ABC transporter, substrate-binding protein SHALO_RS03965 7c98ea2c70e123995fb66840b0567f03 728 SMART SM00091 372 439 1.8E-6 T 11-11-2016 IPR000014 PAS domain SHALO_RS03965 7c98ea2c70e123995fb66840b0567f03 728 SUPERFAMILY SSF55874 584 721 1.51E-22 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS03965 7c98ea2c70e123995fb66840b0567f03 728 Pfam PF08448 PAS fold 378 487 1.7E-10 T 11-11-2016 IPR013656 PAS fold-4 SHALO_RS08025 1b94fcedfdcf02e58c06deac3466ca82 312 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 29 299 9.6E-84 T 11-11-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 SHALO_RS08025 1b94fcedfdcf02e58c06deac3466ca82 312 Gene3D G3DSA:3.40.718.10 1 304 1.5E-95 T 11-11-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 SHALO_RS08025 1b94fcedfdcf02e58c06deac3466ca82 312 SUPERFAMILY SSF53659 2 304 8.79E-79 T 11-11-2016 SHALO_RS07440 a231d747f708d5e2fbd0c92bae197186 242 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 17 85 5.3E-14 T 11-11-2016 IPR007471 Arginine-tRNA-protein transferase, N-terminal GO:0004057|GO:0016598 SHALO_RS07440 a231d747f708d5e2fbd0c92bae197186 242 SUPERFAMILY SSF55729 78 228 4.98E-23 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase SHALO_RS07440 a231d747f708d5e2fbd0c92bae197186 242 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 105 229 4.6E-29 T 11-11-2016 IPR007472 Arginine-tRNA-protein transferase, C-terminal GO:0004057|GO:0016598 SHALO_RS07440 a231d747f708d5e2fbd0c92bae197186 242 PIRSF PIRSF037208 2 241 9.5E-72 T 11-11-2016 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic SHALO_RS07570 c17a8fb7b115893170e55835162e85bd 223 SMART SM00448 5 116 4.9E-28 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS07570 c17a8fb7b115893170e55835162e85bd 223 SMART SM00862 150 219 3.6E-11 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS07570 c17a8fb7b115893170e55835162e85bd 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 219 3.1E-10 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS07570 c17a8fb7b115893170e55835162e85bd 223 Pfam PF00072 Response regulator receiver domain 7 116 2.8E-25 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS07570 c17a8fb7b115893170e55835162e85bd 223 SUPERFAMILY SSF52172 3 175 9.68E-35 T 11-11-2016 IPR011006 CheY-like superfamily SHALO_RS07570 c17a8fb7b115893170e55835162e85bd 223 Gene3D G3DSA:1.10.10.10 154 220 1.4E-13 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS07570 c17a8fb7b115893170e55835162e85bd 223 Gene3D G3DSA:3.40.50.2300 4 153 8.4E-33 T 11-11-2016 SHALO_RS02675 553563b850eb6e14a4660db02de0f1f3 308 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 256 265 7.8E-23 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SHALO_RS02675 553563b850eb6e14a4660db02de0f1f3 308 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 268 291 7.8E-23 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SHALO_RS02675 553563b850eb6e14a4660db02de0f1f3 308 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 47 66 7.8E-23 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SHALO_RS02675 553563b850eb6e14a4660db02de0f1f3 308 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 129 140 7.8E-23 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SHALO_RS02675 553563b850eb6e14a4660db02de0f1f3 308 SUPERFAMILY SSF53671 1 303 6.94E-100 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SHALO_RS02675 553563b850eb6e14a4660db02de0f1f3 308 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 47 54 - T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SHALO_RS02675 553563b850eb6e14a4660db02de0f1f3 308 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 1 304 79.078 T 11-11-2016 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 SHALO_RS02675 553563b850eb6e14a4660db02de0f1f3 308 Gene3D G3DSA:3.40.50.1370 1 138 3.6E-56 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SHALO_RS02675 553563b850eb6e14a4660db02de0f1f3 308 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 151 301 2.0E-53 T 11-11-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 SHALO_RS02675 553563b850eb6e14a4660db02de0f1f3 308 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 2 142 1.1E-49 T 11-11-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 SHALO_RS02675 553563b850eb6e14a4660db02de0f1f3 308 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 2 302 5.6E-118 T 11-11-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 SHALO_RS02675 553563b850eb6e14a4660db02de0f1f3 308 Gene3D G3DSA:3.40.50.1370 139 290 2.4E-57 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SHALO_RS02675 553563b850eb6e14a4660db02de0f1f3 308 PRINTS PR00102 Ornithine carbamoyltransferase signature 118 132 4.1E-29 T 11-11-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 SHALO_RS02675 553563b850eb6e14a4660db02de0f1f3 308 PRINTS PR00102 Ornithine carbamoyltransferase signature 220 230 4.1E-29 T 11-11-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 SHALO_RS02675 553563b850eb6e14a4660db02de0f1f3 308 PRINTS PR00102 Ornithine carbamoyltransferase signature 282 293 4.1E-29 T 11-11-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 SHALO_RS02675 553563b850eb6e14a4660db02de0f1f3 308 PRINTS PR00102 Ornithine carbamoyltransferase signature 45 59 4.1E-29 T 11-11-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 SHALO_RS02675 553563b850eb6e14a4660db02de0f1f3 308 PRINTS PR00102 Ornithine carbamoyltransferase signature 78 91 4.1E-29 T 11-11-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 SHALO_RS07295 d6b93602dc49c1d9a42029398be67f4e 74 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 9 69 3.4E-7 T 11-11-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM SHALO_RS07295 d6b93602dc49c1d9a42029398be67f4e 74 SUPERFAMILY SSF143120 7 67 3.01E-9 T 11-11-2016 SHALO_RS11990 5188e0cf2496061f65c4657888c7f194 223 Pfam PF00072 Response regulator receiver domain 9 118 1.8E-27 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS11990 5188e0cf2496061f65c4657888c7f194 223 SMART SM00862 151 221 3.1E-9 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS11990 5188e0cf2496061f65c4657888c7f194 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 221 4.8E-11 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS11990 5188e0cf2496061f65c4657888c7f194 223 SUPERFAMILY SSF52172 5 177 4.7E-37 T 11-11-2016 IPR011006 CheY-like superfamily SHALO_RS11990 5188e0cf2496061f65c4657888c7f194 223 SMART SM00448 7 118 8.9E-32 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS11990 5188e0cf2496061f65c4657888c7f194 223 Gene3D G3DSA:3.40.50.2300 5 127 4.7E-36 T 11-11-2016 SHALO_RS11990 5188e0cf2496061f65c4657888c7f194 223 Gene3D G3DSA:1.10.10.10 137 222 9.2E-15 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS03360 d71ca0562ca3f9b7afe1d95b5f5b8245 383 Gene3D G3DSA:2.30.42.10 83 158 2.1E-20 T 11-11-2016 IPR001478 PDZ domain GO:0005515 SHALO_RS03360 d71ca0562ca3f9b7afe1d95b5f5b8245 383 SMART SM00245 155 363 1.1E-35 T 11-11-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 SHALO_RS03360 d71ca0562ca3f9b7afe1d95b5f5b8245 383 SMART SM00228 82 153 3.0E-14 T 11-11-2016 IPR001478 PDZ domain GO:0005515 SHALO_RS03360 d71ca0562ca3f9b7afe1d95b5f5b8245 383 Pfam PF03572 Peptidase family S41 180 362 1.1E-39 T 11-11-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 SHALO_RS03360 d71ca0562ca3f9b7afe1d95b5f5b8245 383 Gene3D G3DSA:3.90.226.10 159 382 3.5E-46 T 11-11-2016 IPR029045 ClpP/crotonase-like domain SHALO_RS03360 d71ca0562ca3f9b7afe1d95b5f5b8245 383 SUPERFAMILY SSF52096 13 100 2.49E-51 T 11-11-2016 IPR029045 ClpP/crotonase-like domain SHALO_RS03360 d71ca0562ca3f9b7afe1d95b5f5b8245 383 SUPERFAMILY SSF52096 174 367 2.49E-51 T 11-11-2016 IPR029045 ClpP/crotonase-like domain SHALO_RS03360 d71ca0562ca3f9b7afe1d95b5f5b8245 383 SUPERFAMILY SSF50156 74 163 3.55E-17 T 11-11-2016 IPR001478 PDZ domain GO:0005515 SHALO_RS03360 d71ca0562ca3f9b7afe1d95b5f5b8245 383 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 92 148 8.6E-12 T 11-11-2016 IPR001478 PDZ domain GO:0005515 SHALO_RS01800 758f0c1ec9b901d7ae1d09381fe8d76f 411 SMART SM00710 228 253 2700.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat SHALO_RS01800 758f0c1ec9b901d7ae1d09381fe8d76f 411 SMART SM00710 281 302 2300.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat SHALO_RS01800 758f0c1ec9b901d7ae1d09381fe8d76f 411 SMART SM00710 254 275 13.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat SHALO_RS01800 758f0c1ec9b901d7ae1d09381fe8d76f 411 SMART SM00710 77 105 570.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat SHALO_RS01800 758f0c1ec9b901d7ae1d09381fe8d76f 411 SMART SM00710 206 227 1700.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat SHALO_RS01800 758f0c1ec9b901d7ae1d09381fe8d76f 411 SMART SM00710 134 162 640.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat SHALO_RS01800 758f0c1ec9b901d7ae1d09381fe8d76f 411 SMART SM00710 184 205 3600.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat SHALO_RS01800 758f0c1ec9b901d7ae1d09381fe8d76f 411 TIGRFAM TIGR04247 NosD_copper_fam: nitrous oxide reductase family maturation protein NosD 23 408 8.9E-120 T 11-11-2016 IPR026464 Nitrous oxide reductase family maturation protein NosD SHALO_RS01800 758f0c1ec9b901d7ae1d09381fe8d76f 411 Pfam PF05048 Periplasmic copper-binding protein (NosD) 141 372 1.4E-42 T 11-11-2016 IPR007742 Periplasmic copper-binding protein NosD, beta helix domain SHALO_RS01800 758f0c1ec9b901d7ae1d09381fe8d76f 411 SUPERFAMILY SSF51126 21 398 7.3E-56 T 11-11-2016 IPR011050 Pectin lyase fold/virulence factor SHALO_RS01800 758f0c1ec9b901d7ae1d09381fe8d76f 411 Gene3D G3DSA:2.160.20.10 355 406 1.0E-31 T 11-11-2016 IPR012334 Pectin lyase fold SHALO_RS01800 758f0c1ec9b901d7ae1d09381fe8d76f 411 Gene3D G3DSA:2.160.20.10 21 320 1.0E-31 T 11-11-2016 IPR012334 Pectin lyase fold SHALO_RS01800 758f0c1ec9b901d7ae1d09381fe8d76f 411 TIGRFAM TIGR03804 para_beta_helix: parallel beta-helix repeat 248 276 5.5E-5 T 11-11-2016 IPR022441 Parallel beta-helix repeat-2 SHALO_RS10840 c7c3657e9972815392456144471de2c2 237 Gene3D G3DSA:3.40.190.10 32 93 1.9E-6 T 11-11-2016 SHALO_RS10840 c7c3657e9972815392456144471de2c2 237 Gene3D G3DSA:3.40.190.10 199 236 1.9E-6 T 11-11-2016 SHALO_RS10840 c7c3657e9972815392456144471de2c2 237 SUPERFAMILY SSF53850 19 236 1.13E-37 T 11-11-2016 SHALO_RS10840 c7c3657e9972815392456144471de2c2 237 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 30 236 2.7E-28 T 11-11-2016 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 SHALO_RS10840 c7c3657e9972815392456144471de2c2 237 Gene3D G3DSA:3.40.190.10 101 198 7.5E-22 T 11-11-2016 SHALO_RS10840 c7c3657e9972815392456144471de2c2 237 Pfam PF13531 Bacterial extracellular solute-binding protein 21 236 9.9E-23 T 11-11-2016 SHALO_RS13575 10eb24f581ce0a4f07397d1fc6b8a926 378 Pfam PF08447 PAS fold 162 250 3.9E-14 T 11-11-2016 IPR013655 PAS fold-3 GO:0005515 SHALO_RS13575 10eb24f581ce0a4f07397d1fc6b8a926 378 Gene3D G3DSA:3.30.450.20 118 259 3.5E-23 T 11-11-2016 SHALO_RS13575 10eb24f581ce0a4f07397d1fc6b8a926 378 Pfam PF08448 PAS fold 274 340 5.7E-6 T 11-11-2016 IPR013656 PAS fold-4 SHALO_RS13575 10eb24f581ce0a4f07397d1fc6b8a926 378 Gene3D G3DSA:3.30.450.20 260 370 5.3E-7 T 11-11-2016 SHALO_RS13575 10eb24f581ce0a4f07397d1fc6b8a926 378 SUPERFAMILY SSF55785 146 257 1.92E-17 T 11-11-2016 IPR000014 PAS domain SHALO_RS13575 10eb24f581ce0a4f07397d1fc6b8a926 378 SUPERFAMILY SSF55785 253 371 3.66E-8 T 11-11-2016 IPR000014 PAS domain SHALO_RS13575 10eb24f581ce0a4f07397d1fc6b8a926 378 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 137 260 6.1E-11 T 11-11-2016 IPR000014 PAS domain SHALO_RS13575 10eb24f581ce0a4f07397d1fc6b8a926 378 SMART SM00091 140 208 5.0E-6 T 11-11-2016 IPR000014 PAS domain SHALO_RS13575 10eb24f581ce0a4f07397d1fc6b8a926 378 SMART SM00091 268 336 4.2 T 11-11-2016 IPR000014 PAS domain SHALO_RS13420 c99b1f3dd66e45e83d73a0b3cabb26ac 129 TIGRFAM TIGR00494 crcB: protein CrcB 6 118 2.2E-32 T 11-11-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 SHALO_RS13420 c99b1f3dd66e45e83d73a0b3cabb26ac 129 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 5 122 17.709 T 11-11-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 SHALO_RS13420 c99b1f3dd66e45e83d73a0b3cabb26ac 129 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 7 117 3.6E-21 T 11-11-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 SHALO_RS00685 16ee43907f07319707a22ed2d59fbe93 165 Pfam PF04461 Protein of unknown function (DUF520) 5 165 5.8E-51 T 11-11-2016 IPR007551 Protein of unknown function DUF520 SHALO_RS00685 16ee43907f07319707a22ed2d59fbe93 165 Gene3D G3DSA:3.30.70.860 100 165 5.3E-25 T 11-11-2016 SHALO_RS00685 16ee43907f07319707a22ed2d59fbe93 165 Gene3D G3DSA:3.30.70.990 12 99 2.0E-23 T 11-11-2016 SHALO_RS00685 16ee43907f07319707a22ed2d59fbe93 165 SUPERFAMILY SSF89963 94 165 1.02E-21 T 11-11-2016 IPR007551 Protein of unknown function DUF520 SHALO_RS00685 16ee43907f07319707a22ed2d59fbe93 165 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 4 165 21.164 T 11-11-2016 IPR007551 Protein of unknown function DUF520 SHALO_RS00685 16ee43907f07319707a22ed2d59fbe93 165 SUPERFAMILY SSF89963 5 92 9.15E-23 T 11-11-2016 IPR007551 Protein of unknown function DUF520 SHALO_RS13045 2ffc2ec8c85fa79d4f2f159597bee2e1 697 Pfam PF07715 TonB-dependent Receptor Plug Domain 64 162 1.1E-8 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SHALO_RS13045 2ffc2ec8c85fa79d4f2f159597bee2e1 697 Gene3D G3DSA:2.40.170.20 178 697 7.6E-84 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SHALO_RS13045 2ffc2ec8c85fa79d4f2f159597bee2e1 697 SUPERFAMILY SSF56935 24 697 3.66E-88 T 11-11-2016 SHALO_RS13045 2ffc2ec8c85fa79d4f2f159597bee2e1 697 Gene3D G3DSA:2.170.130.10 22 173 1.2E-18 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SHALO_RS13045 2ffc2ec8c85fa79d4f2f159597bee2e1 697 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 680 697 - T 11-11-2016 IPR010917 TonB-dependent receptor, conserved site SHALO_RS02350 465f570498c66628e945222fd00065c2 260 SUPERFAMILY SSF52540 4 252 3.02E-59 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS02350 465f570498c66628e945222fd00065c2 260 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 231 252 1.4E-5 T 11-11-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal SHALO_RS02350 465f570498c66628e945222fd00065c2 260 Gene3D G3DSA:3.40.50.300 2 248 1.6E-63 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS02350 465f570498c66628e945222fd00065c2 260 Pfam PF00005 ABC transporter 22 181 5.8E-31 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_RS02350 465f570498c66628e945222fd00065c2 260 SMART SM00382 30 229 6.6E-10 T 11-11-2016 IPR003593 AAA+ ATPase domain SHALO_RS10940 cebfb4092171d9ff906e27211428136c 285 Pfam PF12833 Helix-turn-helix domain 204 280 5.2E-20 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SHALO_RS10940 cebfb4092171d9ff906e27211428136c 285 SUPERFAMILY SSF51215 42 169 4.05E-13 T 11-11-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 SHALO_RS10940 cebfb4092171d9ff906e27211428136c 285 Pfam PF02311 AraC-like ligand binding domain 43 148 1.4E-6 T 11-11-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 SHALO_RS10940 cebfb4092171d9ff906e27211428136c 285 Gene3D G3DSA:1.10.10.60 237 280 3.7E-12 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 SHALO_RS10940 cebfb4092171d9ff906e27211428136c 285 SUPERFAMILY SSF46689 234 282 3.99E-10 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 SHALO_RS10940 cebfb4092171d9ff906e27211428136c 285 Gene3D G3DSA:2.60.120.280 37 171 3.6E-11 T 11-11-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 SHALO_RS10940 cebfb4092171d9ff906e27211428136c 285 SMART SM00342 198 280 2.4E-23 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SHALO_RS10940 cebfb4092171d9ff906e27211428136c 285 Gene3D G3DSA:1.10.10.60 181 236 2.3E-12 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 SHALO_RS10940 cebfb4092171d9ff906e27211428136c 285 SUPERFAMILY SSF46689 183 231 2.55E-7 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 SHALO_RS01980 034b70b1d7e30d714fe30b86c3b5a502 107 Pfam PF13202 EF hand 30 49 2.1E-4 T 11-11-2016 IPR002048 EF-hand domain GO:0005509 SHALO_RS01980 034b70b1d7e30d714fe30b86c3b5a502 107 Pfam PF13202 EF hand 73 91 1.0E-4 T 11-11-2016 IPR002048 EF-hand domain GO:0005509 SHALO_RS01980 034b70b1d7e30d714fe30b86c3b5a502 107 SUPERFAMILY SSF47473 29 96 2.98E-9 T 11-11-2016 IPR011992 EF-hand domain pair SHALO_RS01980 034b70b1d7e30d714fe30b86c3b5a502 107 ProSitePatterns PS00018 EF-hand calcium-binding domain. 34 46 - T 11-11-2016 IPR018247 EF-Hand 1, calcium-binding site SHALO_RS01980 034b70b1d7e30d714fe30b86c3b5a502 107 ProSitePatterns PS00018 EF-hand calcium-binding domain. 77 89 - T 11-11-2016 IPR018247 EF-Hand 1, calcium-binding site SHALO_RS01980 034b70b1d7e30d714fe30b86c3b5a502 107 Gene3D G3DSA:1.10.238.10 30 91 3.7E-9 T 11-11-2016 IPR011992 EF-hand domain pair SHALO_RS13850 c4bd31ea0fef36fd25716232dccf299d 112 Gene3D G3DSA:3.40.1260.10 2 112 7.3E-35 T 11-11-2016 IPR027396 DsrEFH-like SHALO_RS13850 c4bd31ea0fef36fd25716232dccf299d 112 SUPERFAMILY SSF75169 4 96 6.47E-8 T 11-11-2016 IPR027396 DsrEFH-like SHALO_RS11455 69b2d6a3220101c3df5837b78cdcb8cf 370 Gene3D G3DSA:3.30.420.10 123 291 1.3E-13 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SHALO_RS11455 69b2d6a3220101c3df5837b78cdcb8cf 370 SUPERFAMILY SSF53098 123 295 9.48E-15 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SHALO_RS11455 69b2d6a3220101c3df5837b78cdcb8cf 370 Gene3D G3DSA:1.10.10.60 6 44 1.1E-6 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 SHALO_RS11455 69b2d6a3220101c3df5837b78cdcb8cf 370 Pfam PF13384 Homeodomain-like domain 12 38 6.8E-6 T 11-11-2016 SHALO_RS11455 69b2d6a3220101c3df5837b78cdcb8cf 370 SUPERFAMILY SSF46689 2 38 7.77E-5 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 SHALO_RS11455 69b2d6a3220101c3df5837b78cdcb8cf 370 Pfam PF00665 Integrase core domain 123 245 4.3E-22 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 SHALO_RS09000 062f190c72c8649d6593adc6056a0af4 434 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 243 280 - T 11-11-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SHALO_RS09000 062f190c72c8649d6593adc6056a0af4 434 Gene3D G3DSA:3.40.640.10 65 333 3.9E-89 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SHALO_RS09000 062f190c72c8649d6593adc6056a0af4 434 Gene3D G3DSA:3.90.1150.10 4 64 2.5E-53 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SHALO_RS09000 062f190c72c8649d6593adc6056a0af4 434 Gene3D G3DSA:3.90.1150.10 335 430 2.5E-53 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SHALO_RS09000 062f190c72c8649d6593adc6056a0af4 434 SUPERFAMILY SSF53383 10 428 2.87E-122 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase SHALO_RS09000 062f190c72c8649d6593adc6056a0af4 434 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 2 431 48.51 T 11-11-2016 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 SHALO_RS09000 062f190c72c8649d6593adc6056a0af4 434 PIRSF PIRSF000521 17 431 2.1E-30 T 11-11-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SHALO_RS09000 062f190c72c8649d6593adc6056a0af4 434 Pfam PF00202 Aminotransferase class-III 25 427 2.2E-121 T 11-11-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SHALO_RS09000 062f190c72c8649d6593adc6056a0af4 434 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 14 428 1.7E-171 T 11-11-2016 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 SHALO_RS02980 943e7497e2c806882fb10679fd5ddce4 248 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 11 228 1.6E-15 T 11-11-2016 SHALO_RS14665 02776b05d6ca40699d11b20472d89179 326 SUPERFAMILY SSF102114 19 296 1.02E-36 T 11-11-2016 SHALO_RS14665 02776b05d6ca40699d11b20472d89179 326 Pfam PF04055 Radical SAM superfamily 27 159 2.3E-11 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SHALO_RS14665 02776b05d6ca40699d11b20472d89179 326 Gene3D G3DSA:3.20.20.70 22 297 5.0E-35 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_RS14665 02776b05d6ca40699d11b20472d89179 326 Pfam PF13394 4Fe-4S single cluster domain 32 129 1.8E-5 T 11-11-2016 SHALO_RS14665 02776b05d6ca40699d11b20472d89179 326 Pfam PF13186 Iron-sulfur cluster-binding domain 229 296 1.6E-10 T 11-11-2016 IPR023885 4Fe4S-binding SPASM domain SHALO_RS11635 5d2e3f1dd9299c14cfcf7094df76ee44 185 SUPERFAMILY SSF55729 1 73 3.06E-12 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase SHALO_RS11635 5d2e3f1dd9299c14cfcf7094df76ee44 185 SUPERFAMILY SSF55729 100 169 3.06E-12 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase SHALO_RS11635 5d2e3f1dd9299c14cfcf7094df76ee44 185 Gene3D G3DSA:3.40.630.30 2 179 3.3E-11 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase SHALO_RS01085 54ef0e5fed1b1c13bf94b8ffa7c5a965 423 SUPERFAMILY SSF55021 342 413 2.2E-11 T 11-11-2016 SHALO_RS01085 54ef0e5fed1b1c13bf94b8ffa7c5a965 423 SUPERFAMILY SSF55347 130 295 6.02E-53 T 11-11-2016 SHALO_RS01085 54ef0e5fed1b1c13bf94b8ffa7c5a965 423 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 176 198 - T 11-11-2016 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 SHALO_RS01085 54ef0e5fed1b1c13bf94b8ffa7c5a965 423 Gene3D G3DSA:3.30.70.260 342 412 2.6E-11 T 11-11-2016 SHALO_RS01085 54ef0e5fed1b1c13bf94b8ffa7c5a965 423 Pfam PF01842 ACT domain 343 410 4.3E-12 T 11-11-2016 IPR002912 ACT domain GO:0008152|GO:0016597 SHALO_RS01085 54ef0e5fed1b1c13bf94b8ffa7c5a965 423 Gene3D G3DSA:3.30.360.10 142 292 6.4E-57 T 11-11-2016 SHALO_RS01085 54ef0e5fed1b1c13bf94b8ffa7c5a965 423 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 8 114 3.7E-14 T 11-11-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 SHALO_RS01085 54ef0e5fed1b1c13bf94b8ffa7c5a965 423 Pfam PF00742 Homoserine dehydrogenase 130 308 1.4E-64 T 11-11-2016 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 SHALO_RS01085 54ef0e5fed1b1c13bf94b8ffa7c5a965 423 Gene3D G3DSA:3.40.50.720 1 141 4.5E-41 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS01085 54ef0e5fed1b1c13bf94b8ffa7c5a965 423 PIRSF PIRSF000098 1 423 7.1E-159 T 11-11-2016 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 SHALO_RS01085 54ef0e5fed1b1c13bf94b8ffa7c5a965 423 SUPERFAMILY SSF51735 1 151 1.6E-30 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS04750 05ff68f7b646d6c6ab3a162bde308c8e 273 Gene3D G3DSA:3.40.30.10 42 203 3.3E-24 T 11-11-2016 IPR012336 Thioredoxin-like fold SHALO_RS04750 05ff68f7b646d6c6ab3a162bde308c8e 273 SUPERFAMILY SSF52833 45 195 5.1E-20 T 11-11-2016 IPR012336 Thioredoxin-like fold SHALO_RS14560 bbdfe4ba22dba6cb49d555fafe587576 212 SUPERFAMILY SSF55729 12 146 1.26E-17 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase SHALO_RS14560 bbdfe4ba22dba6cb49d555fafe587576 212 Pfam PF00583 Acetyltransferase (GNAT) family 53 120 4.0E-9 T 11-11-2016 IPR000182 GNAT domain GO:0008080 SHALO_RS14560 bbdfe4ba22dba6cb49d555fafe587576 212 Gene3D G3DSA:3.40.630.30 12 167 1.0E-26 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase SHALO_RS12750 ebdf5d9d3decbe1dc36c232735c5a93f 247 SMART SM00052 9 243 5.0E-8 T 11-11-2016 IPR001633 EAL domain SHALO_RS12750 ebdf5d9d3decbe1dc36c232735c5a93f 247 Pfam PF00563 EAL domain 21 236 1.7E-33 T 11-11-2016 IPR001633 EAL domain SHALO_RS12750 ebdf5d9d3decbe1dc36c232735c5a93f 247 SUPERFAMILY SSF141868 15 237 8.37E-40 T 11-11-2016 IPR001633 EAL domain SHALO_RS12750 ebdf5d9d3decbe1dc36c232735c5a93f 247 Gene3D G3DSA:3.20.20.450 16 237 1.7E-33 T 11-11-2016 IPR001633 EAL domain SHALO_RS13680 2b4b39f86984fe593a3b6afa5ffc2546 608 Gene3D G3DSA:3.40.50.300 216 372 1.3E-51 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS13680 2b4b39f86984fe593a3b6afa5ffc2546 608 SMART SM00490 262 343 2.1E-29 T 11-11-2016 IPR001650 Helicase, C-terminal SHALO_RS13680 2b4b39f86984fe593a3b6afa5ffc2546 608 SUPERFAMILY SSF52540 76 361 1.6E-74 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS13680 2b4b39f86984fe593a3b6afa5ffc2546 608 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 156 164 - T 11-11-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site SHALO_RS13680 2b4b39f86984fe593a3b6afa5ffc2546 608 Pfam PF00271 Helicase conserved C-terminal domain 237 343 1.8E-29 T 11-11-2016 IPR001650 Helicase, C-terminal SHALO_RS13680 2b4b39f86984fe593a3b6afa5ffc2546 608 Pfam PF00270 DEAD/DEAH box helicase 34 199 5.1E-43 T 11-11-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SHALO_RS13680 2b4b39f86984fe593a3b6afa5ffc2546 608 Gene3D G3DSA:3.40.50.300 6 215 1.6E-74 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS13680 2b4b39f86984fe593a3b6afa5ffc2546 608 SMART SM00487 28 226 1.6E-59 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SHALO_RS02205 96b9cefa646c81268bc3757655bd04f5 320 PIRSF PIRSF000102 1 316 3.5E-88 T 11-11-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SHALO_RS02205 96b9cefa646c81268bc3757655bd04f5 320 Gene3D G3DSA:3.40.50.720 1 141 6.2E-40 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS02205 96b9cefa646c81268bc3757655bd04f5 320 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 1 140 9.6E-32 T 11-11-2016 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 SHALO_RS02205 96b9cefa646c81268bc3757655bd04f5 320 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 144 309 3.9E-22 T 11-11-2016 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 SHALO_RS02205 96b9cefa646c81268bc3757655bd04f5 320 SUPERFAMILY SSF56327 143 308 4.32E-44 T 11-11-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 SHALO_RS02205 96b9cefa646c81268bc3757655bd04f5 320 PRINTS PR00086 L-lactate dehydrogenase signature 115 135 1.5E-24 T 11-11-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SHALO_RS02205 96b9cefa646c81268bc3757655bd04f5 320 PRINTS PR00086 L-lactate dehydrogenase signature 139 157 1.5E-24 T 11-11-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SHALO_RS02205 96b9cefa646c81268bc3757655bd04f5 320 PRINTS PR00086 L-lactate dehydrogenase signature 169 182 1.5E-24 T 11-11-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SHALO_RS02205 96b9cefa646c81268bc3757655bd04f5 320 PRINTS PR00086 L-lactate dehydrogenase signature 2 26 1.5E-24 T 11-11-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SHALO_RS02205 96b9cefa646c81268bc3757655bd04f5 320 PRINTS PR00086 L-lactate dehydrogenase signature 27 51 1.5E-24 T 11-11-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SHALO_RS02205 96b9cefa646c81268bc3757655bd04f5 320 SUPERFAMILY SSF51735 2 143 2.34E-36 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS02205 96b9cefa646c81268bc3757655bd04f5 320 Gene3D G3DSA:3.90.110.10 143 308 5.3E-47 T 11-11-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 SHALO_RS13260 eb1e443189f62ac2392ea9a3b2c1355b 137 PRINTS PR00598 Bacterial regulatory protein MarR family signature 67 82 3.0E-10 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SHALO_RS13260 eb1e443189f62ac2392ea9a3b2c1355b 137 PRINTS PR00598 Bacterial regulatory protein MarR family signature 116 136 3.0E-10 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SHALO_RS13260 eb1e443189f62ac2392ea9a3b2c1355b 137 PRINTS PR00598 Bacterial regulatory protein MarR family signature 86 102 3.0E-10 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SHALO_RS13260 eb1e443189f62ac2392ea9a3b2c1355b 137 SUPERFAMILY SSF46785 6 136 4.72E-27 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS13260 eb1e443189f62ac2392ea9a3b2c1355b 137 SMART SM00347 26 126 6.8E-12 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SHALO_RS13260 eb1e443189f62ac2392ea9a3b2c1355b 137 Gene3D G3DSA:1.10.10.10 6 136 1.3E-29 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS13260 eb1e443189f62ac2392ea9a3b2c1355b 137 Pfam PF12802 MarR family 32 90 6.7E-8 T 11-11-2016 SHALO_RS05545 54d100c050d148c50e5eb0c34666a2e3 142 TIGRFAM TIGR01120 rpiB: ribose 5-phosphate isomerase B 2 141 5.0E-57 T 11-11-2016 IPR004785 Ribose 5-phosphate isomerase B GO:0004751|GO:0006098 SHALO_RS05545 54d100c050d148c50e5eb0c34666a2e3 142 Gene3D G3DSA:3.40.1400.10 2 141 7.5E-61 T 11-11-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 SHALO_RS05545 54d100c050d148c50e5eb0c34666a2e3 142 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 4 141 4.3E-55 T 11-11-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 SHALO_RS05545 54d100c050d148c50e5eb0c34666a2e3 142 PIRSF PIRSF005384 1 142 1.6E-53 T 11-11-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 SHALO_RS05545 54d100c050d148c50e5eb0c34666a2e3 142 SUPERFAMILY SSF89623 2 140 8.5E-54 T 11-11-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 SHALO_RS05545 54d100c050d148c50e5eb0c34666a2e3 142 Pfam PF02502 Ribose/Galactose Isomerase 4 140 1.3E-52 T 11-11-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 SHALO_RS09985 05504d95e09d5a839873e9849167438c 213 SUPERFAMILY SSF51366 1 212 2.51E-64 T 11-11-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 SHALO_RS09985 05504d95e09d5a839873e9849167438c 213 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 2 212 5.1E-89 T 11-11-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 SHALO_RS09985 05504d95e09d5a839873e9849167438c 213 PIRSF PIRSF001461 1 213 1.2E-90 T 11-11-2016 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 SHALO_RS09985 05504d95e09d5a839873e9849167438c 213 Pfam PF00834 Ribulose-phosphate 3 epimerase family 3 199 1.4E-81 T 11-11-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 SHALO_RS09985 05504d95e09d5a839873e9849167438c 213 Gene3D G3DSA:3.20.20.70 2 212 4.7E-83 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_RS09985 05504d95e09d5a839873e9849167438c 213 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 30 44 - T 11-11-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 SHALO_RS07310 3d9e854a65e433a2551036e526c8c9fb 478 Gene3D G3DSA:3.40.1190.10 148 353 3.2E-36 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 SHALO_RS07310 3d9e854a65e433a2551036e526c8c9fb 478 SUPERFAMILY SSF53244 356 470 4.12E-18 T 11-11-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 SHALO_RS07310 3d9e854a65e433a2551036e526c8c9fb 478 Gene3D G3DSA:3.90.190.20 356 470 2.1E-11 T 11-11-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 SHALO_RS07310 3d9e854a65e433a2551036e526c8c9fb 478 Pfam PF08245 Mur ligase middle domain 162 336 2.7E-23 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 SHALO_RS07310 3d9e854a65e433a2551036e526c8c9fb 478 SUPERFAMILY SSF53623 156 355 1.96E-32 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 SHALO_RS11615 d6a8d06553fea6aee52b23f4b3e7af7e 381 Gene3D G3DSA:1.20.1090.10 185 380 7.3E-45 T 11-11-2016 SHALO_RS11615 d6a8d06553fea6aee52b23f4b3e7af7e 381 Gene3D G3DSA:3.40.50.1970 9 184 3.1E-54 T 11-11-2016 SHALO_RS11615 d6a8d06553fea6aee52b23f4b3e7af7e 381 SUPERFAMILY SSF56796 4 379 2.22E-99 T 11-11-2016 SHALO_RS11615 d6a8d06553fea6aee52b23f4b3e7af7e 381 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 359 4.4E-91 T 11-11-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 SHALO_RS00065 867e1f68cecda1afac5e50ade5804e29 392 SUPERFAMILY SSF103473 8 380 4.32E-56 T 11-11-2016 IPR020846 Major facilitator superfamily domain SHALO_RS00065 867e1f68cecda1afac5e50ade5804e29 392 Gene3D G3DSA:1.20.1250.20 11 191 3.1E-29 T 11-11-2016 SHALO_RS00065 867e1f68cecda1afac5e50ade5804e29 392 Gene3D G3DSA:1.20.1250.20 204 379 3.5E-5 T 11-11-2016 SHALO_RS00065 867e1f68cecda1afac5e50ade5804e29 392 Pfam PF07690 Major Facilitator Superfamily 15 348 4.3E-36 T 11-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SHALO_RS00065 867e1f68cecda1afac5e50ade5804e29 392 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 9 375 7.6E-81 T 11-11-2016 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 SHALO_RS00065 867e1f68cecda1afac5e50ade5804e29 392 ProSitePatterns PS00216 Sugar transport proteins signature 1. 64 80 - T 11-11-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 SHALO_RS05520 958d14e81c7696a10b620c71adc187c6 486 Gene3D G3DSA:3.40.220.10 35 158 8.8E-17 T 11-11-2016 SHALO_RS05520 958d14e81c7696a10b620c71adc187c6 486 Gene3D G3DSA:3.40.630.10 159 479 7.9E-124 T 11-11-2016 SHALO_RS05520 958d14e81c7696a10b620c71adc187c6 486 PRINTS PR00481 Cytosol aminopeptidase signature 241 258 1.6E-49 T 11-11-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 SHALO_RS05520 958d14e81c7696a10b620c71adc187c6 486 PRINTS PR00481 Cytosol aminopeptidase signature 350 365 1.6E-49 T 11-11-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 SHALO_RS05520 958d14e81c7696a10b620c71adc187c6 486 PRINTS PR00481 Cytosol aminopeptidase signature 300 321 1.6E-49 T 11-11-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 SHALO_RS05520 958d14e81c7696a10b620c71adc187c6 486 PRINTS PR00481 Cytosol aminopeptidase signature 263 284 1.6E-49 T 11-11-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 SHALO_RS05520 958d14e81c7696a10b620c71adc187c6 486 PRINTS PR00481 Cytosol aminopeptidase signature 322 342 1.6E-49 T 11-11-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 SHALO_RS05520 958d14e81c7696a10b620c71adc187c6 486 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 165 472 2.5E-107 T 11-11-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 SHALO_RS05520 958d14e81c7696a10b620c71adc187c6 486 SUPERFAMILY SSF52949 1 163 2.35E-15 T 11-11-2016 SHALO_RS05520 958d14e81c7696a10b620c71adc187c6 486 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 326 333 - T 11-11-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 SHALO_RS05520 958d14e81c7696a10b620c71adc187c6 486 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 41 125 8.2E-8 T 11-11-2016 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 SHALO_RS05520 958d14e81c7696a10b620c71adc187c6 486 SUPERFAMILY SSF53187 160 478 4.08E-109 T 11-11-2016 SHALO_RS05520 958d14e81c7696a10b620c71adc187c6 486 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 4 482 33.343 T 11-11-2016 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 SHALO_RS10160 25d1147e931644e3d1d5b0a0b400ce85 224 Gene3D G3DSA:3.40.50.300 4 197 2.0E-45 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS10160 25d1147e931644e3d1d5b0a0b400ce85 224 Pfam PF13500 AAA domain 6 165 3.2E-30 T 11-11-2016 SHALO_RS10160 25d1147e931644e3d1d5b0a0b400ce85 224 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 3 203 21.638 T 11-11-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 SHALO_RS10160 25d1147e931644e3d1d5b0a0b400ce85 224 SUPERFAMILY SSF52540 1 198 1.49E-35 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS10160 25d1147e931644e3d1d5b0a0b400ce85 224 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 7 169 6.9E-36 T 11-11-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 SHALO_RS15075 6f5d5cc99843243eb8ac5d881d3d6d35 233 Gene3D G3DSA:3.40.50.150 7 146 9.0E-21 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS15075 6f5d5cc99843243eb8ac5d881d3d6d35 233 Pfam PF13489 Methyltransferase domain 20 137 1.4E-7 T 11-11-2016 SHALO_RS15075 6f5d5cc99843243eb8ac5d881d3d6d35 233 SUPERFAMILY SSF53335 9 196 3.66E-21 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS01100 5cd59382fe03244f0332a953946e2fe5 310 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 3 307 8.7E-105 T 11-11-2016 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00240+1.8.1.9|KEGG: 00450+1.8.1.9 SHALO_RS01100 5cd59382fe03244f0332a953946e2fe5 310 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 295 2.2E-47 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHALO_RS01100 5cd59382fe03244f0332a953946e2fe5 310 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 271 289 9.5E-56 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SHALO_RS01100 5cd59382fe03244f0332a953946e2fe5 310 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 37 52 9.5E-56 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SHALO_RS01100 5cd59382fe03244f0332a953946e2fe5 310 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 194 210 9.5E-56 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SHALO_RS01100 5cd59382fe03244f0332a953946e2fe5 310 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 105 113 9.5E-56 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SHALO_RS01100 5cd59382fe03244f0332a953946e2fe5 310 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 142 166 9.5E-56 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SHALO_RS01100 5cd59382fe03244f0332a953946e2fe5 310 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 3 25 9.5E-56 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SHALO_RS01100 5cd59382fe03244f0332a953946e2fe5 310 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 232 253 9.5E-56 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SHALO_RS01100 5cd59382fe03244f0332a953946e2fe5 310 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 127 139 9.5E-56 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SHALO_RS01100 5cd59382fe03244f0332a953946e2fe5 310 Gene3D G3DSA:3.50.50.60 2 118 3.9E-34 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHALO_RS01100 5cd59382fe03244f0332a953946e2fe5 310 Gene3D G3DSA:3.50.50.60 246 308 3.9E-34 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHALO_RS01100 5cd59382fe03244f0332a953946e2fe5 310 Gene3D G3DSA:3.50.50.60 119 238 1.4E-30 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHALO_RS01100 5cd59382fe03244f0332a953946e2fe5 310 SUPERFAMILY SSF51905 1 307 3.78E-46 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHALO_RS01100 5cd59382fe03244f0332a953946e2fe5 310 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 104 122 5.6E-30 T 11-11-2016 SHALO_RS01100 5cd59382fe03244f0332a953946e2fe5 310 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 5.6E-30 T 11-11-2016 SHALO_RS01100 5cd59382fe03244f0332a953946e2fe5 310 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 146 164 5.6E-30 T 11-11-2016 SHALO_RS01100 5cd59382fe03244f0332a953946e2fe5 310 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 230 246 5.6E-30 T 11-11-2016 SHALO_RS01100 5cd59382fe03244f0332a953946e2fe5 310 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 283 5.6E-30 T 11-11-2016 SHALO_RS14395 989756c936c72407c62de9ba9df4a47c 77 SUPERFAMILY SSF52833 1 75 1.23E-18 T 11-11-2016 IPR012336 Thioredoxin-like fold SHALO_RS14395 989756c936c72407c62de9ba9df4a47c 77 TIGRFAM TIGR00412 redox_disulf_2: redox-active disulfide protein 2 1 75 6.9E-23 T 11-11-2016 IPR005243 Redox-active disulphide protein 2 SHALO_RS14395 989756c936c72407c62de9ba9df4a47c 77 PIRSF PIRSF037031 1 77 1.9E-31 T 11-11-2016 IPR005243 Redox-active disulphide protein 2 SHALO_RS14395 989756c936c72407c62de9ba9df4a47c 77 Pfam PF13192 Thioredoxin domain 1 75 8.7E-26 T 11-11-2016 IPR012336 Thioredoxin-like fold SHALO_RS14395 989756c936c72407c62de9ba9df4a47c 77 Gene3D G3DSA:3.40.30.10 1 75 3.9E-27 T 11-11-2016 IPR012336 Thioredoxin-like fold SHALO_RS01615 413d60fe5fff7217cb5411523aaa25fd 305 Pfam PF02833 DHHA2 domain 180 302 1.8E-19 T 11-11-2016 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1 SHALO_RS01615 413d60fe5fff7217cb5411523aaa25fd 305 SMART SM01131 179 305 6.3E-50 T 11-11-2016 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1 SHALO_RS01615 413d60fe5fff7217cb5411523aaa25fd 305 SUPERFAMILY SSF64182 3 305 8.89E-68 T 11-11-2016 SHALO_RS01615 413d60fe5fff7217cb5411523aaa25fd 305 Gene3D G3DSA:3.90.1640.10 2 183 6.3E-54 T 11-11-2016 SHALO_RS01615 413d60fe5fff7217cb5411523aaa25fd 305 Pfam PF01368 DHH family 3 143 6.3E-19 T 11-11-2016 IPR001667 DDH domain SHALO_RS11415 dfd6fa499b7673cabb470ba5584b1528 76 Pfam PF00550 Phosphopantetheine attachment site 6 71 2.6E-15 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain SHALO_RS11415 dfd6fa499b7673cabb470ba5584b1528 76 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 2 75 1.3E-33 T 11-11-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS11415 dfd6fa499b7673cabb470ba5584b1528 76 Gene3D G3DSA:1.10.1200.10 3 75 5.7E-32 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain SHALO_RS11415 dfd6fa499b7673cabb470ba5584b1528 76 Hamap MF_01217 Acyl carrier protein [acpP]. 2 76 21.916 T 11-11-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS11415 dfd6fa499b7673cabb470ba5584b1528 76 SUPERFAMILY SSF47336 3 75 1.31E-22 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain SHALO_RS11415 dfd6fa499b7673cabb470ba5584b1528 76 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 33 73 2.0E-9 T 11-11-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS11415 dfd6fa499b7673cabb470ba5584b1528 76 ProSitePatterns PS00012 Phosphopantetheine attachment site. 31 46 - T 11-11-2016 IPR006162 Phosphopantetheine attachment site SHALO_RS11415 dfd6fa499b7673cabb470ba5584b1528 76 SMART SM00823 Phosphopantetheine attachment site 4 62 0.0074 T 11-11-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 SHALO_RS06620 482b5d0af57fafb42106ece58ce59d79 465 Pfam PF00158 Sigma-54 interaction domain 203 369 1.4E-74 T 11-11-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 SHALO_RS06620 482b5d0af57fafb42106ece58ce59d79 465 Gene3D G3DSA:3.40.50.300 199 375 3.6E-62 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS06620 482b5d0af57fafb42106ece58ce59d79 465 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 227 240 - T 11-11-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 SHALO_RS06620 482b5d0af57fafb42106ece58ce59d79 465 Pfam PF13185 GAF domain 81 169 6.3E-8 T 11-11-2016 IPR003018 GAF domain GO:0005515 SHALO_RS06620 482b5d0af57fafb42106ece58ce59d79 465 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 415 424 - T 11-11-2016 IPR025944 Sigma-54 interaction domain, conserved site SHALO_RS06620 482b5d0af57fafb42106ece58ce59d79 465 SUPERFAMILY SSF52540 202 442 5.13E-73 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS06620 482b5d0af57fafb42106ece58ce59d79 465 SMART SM00382 223 366 6.4E-10 T 11-11-2016 IPR003593 AAA+ ATPase domain SHALO_RS06620 482b5d0af57fafb42106ece58ce59d79 465 Gene3D G3DSA:3.30.450.40 14 183 2.3E-22 T 11-11-2016 IPR029016 GAF domain-like SHALO_RS06620 482b5d0af57fafb42106ece58ce59d79 465 SMART SM00065 32 179 9.8E-9 T 11-11-2016 IPR003018 GAF domain GO:0005515 SHALO_RS06620 482b5d0af57fafb42106ece58ce59d79 465 Gene3D G3DSA:1.10.8.60 376 446 1.4E-22 T 11-11-2016 SHALO_RS06620 482b5d0af57fafb42106ece58ce59d79 465 SUPERFAMILY SSF55781 14 169 3.27E-20 T 11-11-2016 IPR029016 GAF domain-like SHALO_RS06620 482b5d0af57fafb42106ece58ce59d79 465 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 289 304 - T 11-11-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 SHALO_RS13635 8d5745d7eada7a5847ac74c61788dcb7 705 SUPERFAMILY SSF82866 565 697 6.28E-6 T 11-11-2016 SHALO_RS13635 8d5745d7eada7a5847ac74c61788dcb7 705 SUPERFAMILY SSF82866 210 360 1.12E-11 T 11-11-2016 SHALO_RS01590 8f49480ae32ba33bdbbd590d41c42d5f 222 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 218 7.1E-12 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS01590 8f49480ae32ba33bdbbd590d41c42d5f 222 SUPERFAMILY SSF46894 131 218 9.64E-14 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SHALO_RS01590 8f49480ae32ba33bdbbd590d41c42d5f 222 Pfam PF00072 Response regulator receiver domain 3 112 1.3E-22 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS01590 8f49480ae32ba33bdbbd590d41c42d5f 222 SUPERFAMILY SSF52172 1 160 3.42E-32 T 11-11-2016 IPR011006 CheY-like superfamily SHALO_RS01590 8f49480ae32ba33bdbbd590d41c42d5f 222 Gene3D G3DSA:3.40.50.2300 1 148 1.2E-31 T 11-11-2016 SHALO_RS01590 8f49480ae32ba33bdbbd590d41c42d5f 222 SMART SM00862 147 218 2.8E-10 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS01590 8f49480ae32ba33bdbbd590d41c42d5f 222 Gene3D G3DSA:1.10.10.10 149 219 1.5E-14 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS01590 8f49480ae32ba33bdbbd590d41c42d5f 222 SMART SM00448 1 112 3.1E-31 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS05195 ccfa349690ddc0b4aea1bd27a8b7fa66 126 Gene3D G3DSA:1.10.260.40 4 60 5.8E-7 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SHALO_RS05195 ccfa349690ddc0b4aea1bd27a8b7fa66 126 Pfam PF01381 Helix-turn-helix 10 61 2.4E-6 T 11-11-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SHALO_RS05195 ccfa349690ddc0b4aea1bd27a8b7fa66 126 SMART SM00530 9 63 0.001 T 11-11-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SHALO_RS05195 ccfa349690ddc0b4aea1bd27a8b7fa66 126 SUPERFAMILY SSF47413 2 60 9.48E-7 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SHALO_RS01780 bc0ab323065fecaf66e1b965929292df 302 Gene3D G3DSA:3.30.70.20 200 294 1.1E-10 T 11-11-2016 SHALO_RS01780 bc0ab323065fecaf66e1b965929292df 302 Pfam PF12801 4Fe-4S binding domain 90 133 4.0E-12 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_RS01780 bc0ab323065fecaf66e1b965929292df 302 Pfam PF12801 4Fe-4S binding domain 188 222 4.5E-6 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_RS01780 bc0ab323065fecaf66e1b965929292df 302 Pfam PF12838 4Fe-4S dicluster domain 235 291 4.5E-6 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_RS01780 bc0ab323065fecaf66e1b965929292df 302 TIGRFAM TIGR02163 napH_: ferredoxin-type protein, NapH/MauN family 34 295 6.6E-85 T 11-11-2016 IPR011886 Ferredoxin-type protein, NapH/MauN family GO:0005506 SHALO_RS01780 bc0ab323065fecaf66e1b965929292df 302 SUPERFAMILY SSF54862 101 123 7.78E-16 T 11-11-2016 SHALO_RS01780 bc0ab323065fecaf66e1b965929292df 302 SUPERFAMILY SSF54862 177 296 7.78E-16 T 11-11-2016 SHALO_RS06915 58c92386031ab9ae56bd590286cc91a4 68 SUPERFAMILY SSF55331 2 64 1.41E-21 T 11-11-2016 IPR014347 Tautomerase/MIF superfamily SHALO_RS06915 58c92386031ab9ae56bd590286cc91a4 68 TIGRFAM TIGR00013 taut: 4-oxalocrotonate tautomerase family enzyme 1 64 4.4E-28 T 11-11-2016 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type GO:0006725|GO:0016853 SHALO_RS06915 58c92386031ab9ae56bd590286cc91a4 68 Pfam PF01361 Tautomerase enzyme 2 61 3.5E-23 T 11-11-2016 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 SHALO_RS06915 58c92386031ab9ae56bd590286cc91a4 68 Gene3D G3DSA:3.30.429.20 1 61 1.2E-28 T 11-11-2016 SHALO_RS06175 f8ad0d1e025c1e5ea17e751c7505fdc4 136 Gene3D G3DSA:3.10.180.10 1 131 1.5E-42 T 11-11-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SHALO_RS06175 f8ad0d1e025c1e5ea17e751c7505fdc4 136 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 124 1.1E-13 T 11-11-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain SHALO_RS06175 f8ad0d1e025c1e5ea17e751c7505fdc4 136 SUPERFAMILY SSF54593 5 130 6.71E-28 T 11-11-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SHALO_RS09490 faa97105ef3d2cd94eebb328e2ae10c9 581 Gene3D G3DSA:2.20.25.90 4 39 2.9E-4 T 11-11-2016 SHALO_RS09490 faa97105ef3d2cd94eebb328e2ae10c9 581 Gene3D G3DSA:2.40.40.20 511 581 2.3E-7 T 11-11-2016 SHALO_RS09490 faa97105ef3d2cd94eebb328e2ae10c9 581 SMART SM00926 1 50 0.0021 T 11-11-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS09490 faa97105ef3d2cd94eebb328e2ae10c9 581 SUPERFAMILY SSF53706 4 475 3.66E-69 T 11-11-2016 SHALO_RS09490 faa97105ef3d2cd94eebb328e2ae10c9 581 SUPERFAMILY SSF50692 480 580 9.95E-11 T 11-11-2016 IPR009010 Aspartate decarboxylase-like domain SHALO_RS09490 faa97105ef3d2cd94eebb328e2ae10c9 581 Gene3D G3DSA:3.40.50.740 59 112 2.8E-17 T 11-11-2016 SHALO_RS09490 faa97105ef3d2cd94eebb328e2ae10c9 581 Gene3D G3DSA:3.40.50.740 293 472 2.8E-17 T 11-11-2016 SHALO_RS09490 faa97105ef3d2cd94eebb328e2ae10c9 581 Gene3D G3DSA:3.40.228.10 113 292 1.6E-30 T 11-11-2016 SHALO_RS09490 faa97105ef3d2cd94eebb328e2ae10c9 581 Pfam PF00384 Molybdopterin oxidoreductase 119 404 2.0E-19 T 11-11-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS03275 4d272705a539b7461730d4949b95ddf0 920 Gene3D G3DSA:3.40.50.620 12 203 1.3E-129 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHALO_RS03275 4d272705a539b7461730d4949b95ddf0 920 Gene3D G3DSA:3.40.50.620 406 644 1.3E-129 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHALO_RS03275 4d272705a539b7461730d4949b95ddf0 920 Pfam PF08264 Anticodon-binding domain of tRNA 691 840 7.2E-17 T 11-11-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 SHALO_RS03275 4d272705a539b7461730d4949b95ddf0 920 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 53 64 8.8E-32 T 11-11-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 SHALO_RS03275 4d272705a539b7461730d4949b95ddf0 920 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 401 416 8.8E-32 T 11-11-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 SHALO_RS03275 4d272705a539b7461730d4949b95ddf0 920 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 534 547 8.8E-32 T 11-11-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 SHALO_RS03275 4d272705a539b7461730d4949b95ddf0 920 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 236 259 8.8E-32 T 11-11-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 SHALO_RS03275 4d272705a539b7461730d4949b95ddf0 920 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 570 579 8.8E-32 T 11-11-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 SHALO_RS03275 4d272705a539b7461730d4949b95ddf0 920 SUPERFAMILY SSF47323 661 919 7.2E-46 T 11-11-2016 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 SHALO_RS03275 4d272705a539b7461730d4949b95ddf0 920 SUPERFAMILY SSF52374 1 205 6.44E-129 T 11-11-2016 SHALO_RS03275 4d272705a539b7461730d4949b95ddf0 920 SUPERFAMILY SSF52374 403 657 6.44E-129 T 11-11-2016 SHALO_RS03275 4d272705a539b7461730d4949b95ddf0 920 SUPERFAMILY SSF50677 207 403 5.23E-41 T 11-11-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 SHALO_RS03275 4d272705a539b7461730d4949b95ddf0 920 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 60 71 - T 11-11-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 SHALO_RS03275 4d272705a539b7461730d4949b95ddf0 920 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 1 919 18.908 T 11-11-2016 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 SHALO_RS03275 4d272705a539b7461730d4949b95ddf0 920 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 27 650 9.8E-212 T 11-11-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 SHALO_RS03275 4d272705a539b7461730d4949b95ddf0 920 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 14 840 6.4E-266 T 11-11-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 SHALO_RS03275 4d272705a539b7461730d4949b95ddf0 920 Gene3D G3DSA:1.10.730.10 651 795 4.8E-28 T 11-11-2016 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 SHALO_RS03275 4d272705a539b7461730d4949b95ddf0 920 Gene3D G3DSA:3.90.740.10 209 391 8.7E-48 T 11-11-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 SHALO_RS06005 fbf8ad69bc72395ddb4ae3856b61e4af 220 SMART SM00986 66 214 3.7E-29 T 11-11-2016 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 SHALO_RS06005 fbf8ad69bc72395ddb4ae3856b61e4af 220 SMART SM00987 66 214 3.7E-29 T 11-11-2016 SHALO_RS06005 fbf8ad69bc72395ddb4ae3856b61e4af 220 Gene3D G3DSA:3.40.470.10 41 219 2.2E-58 T 11-11-2016 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 SHALO_RS06005 fbf8ad69bc72395ddb4ae3856b61e4af 220 TIGRFAM TIGR00758 UDG_fam4: uracil-DNA glycosylase, family 4 52 219 1.2E-49 T 11-11-2016 IPR005273 Uracil-DNA glycosylase, family 4 domain SHALO_RS06005 fbf8ad69bc72395ddb4ae3856b61e4af 220 Pfam PF03167 Uracil DNA glycosylase superfamily 66 213 1.0E-39 T 11-11-2016 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 SHALO_RS06005 fbf8ad69bc72395ddb4ae3856b61e4af 220 SUPERFAMILY SSF52141 40 219 1.5E-52 T 11-11-2016 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 SHALO_RS11125 a59b80dedcbb303cfb8c8a6689759b5d 333 SUPERFAMILY SSF53448 7 168 1.85E-18 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases SHALO_RS11125 a59b80dedcbb303cfb8c8a6689759b5d 333 Pfam PF00535 Glycosyl transferase family 2 8 185 1.3E-14 T 11-11-2016 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 SHALO_RS11125 a59b80dedcbb303cfb8c8a6689759b5d 333 Gene3D G3DSA:3.90.550.10 3 126 2.9E-18 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases SHALO_RS07045 e9793ce3e4f8e236a686fbdf46a45d78 447 ProSitePatterns PS00507 Nickel-dependent hydrogenases large subunit signature 1. 37 62 - T 11-11-2016 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 SHALO_RS07045 e9793ce3e4f8e236a686fbdf46a45d78 447 Gene3D G3DSA:1.10.645.10 2 446 1.0E-86 T 11-11-2016 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS07045 e9793ce3e4f8e236a686fbdf46a45d78 447 SUPERFAMILY SSF56762 1 197 2.88E-77 T 11-11-2016 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS07045 e9793ce3e4f8e236a686fbdf46a45d78 447 SUPERFAMILY SSF56762 227 446 2.88E-77 T 11-11-2016 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS07045 e9793ce3e4f8e236a686fbdf46a45d78 447 Pfam PF00374 Nickel-dependent hydrogenase 37 112 3.3E-15 T 11-11-2016 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 SHALO_RS07045 e9793ce3e4f8e236a686fbdf46a45d78 447 Pfam PF00374 Nickel-dependent hydrogenase 140 445 6.3E-23 T 11-11-2016 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 SHALO_RS04040 6b7e7c8e170d4a3fde7ea4d6e1f824cd 558 SUPERFAMILY SSF50249 374 457 2.69E-22 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold SHALO_RS04040 6b7e7c8e170d4a3fde7ea4d6e1f824cd 558 SUPERFAMILY SSF50249 204 290 9.61E-22 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold SHALO_RS04040 6b7e7c8e170d4a3fde7ea4d6e1f824cd 558 PRINTS PR00681 Ribosomal protein S1 signature 343 361 5.1E-36 T 11-11-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 SHALO_RS04040 6b7e7c8e170d4a3fde7ea4d6e1f824cd 558 PRINTS PR00681 Ribosomal protein S1 signature 225 246 5.1E-36 T 11-11-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 SHALO_RS04040 6b7e7c8e170d4a3fde7ea4d6e1f824cd 558 PRINTS PR00681 Ribosomal protein S1 signature 168 188 5.1E-36 T 11-11-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 SHALO_RS04040 6b7e7c8e170d4a3fde7ea4d6e1f824cd 558 PRINTS PR00681 Ribosomal protein S1 signature 54 68 5.1E-36 T 11-11-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 SHALO_RS04040 6b7e7c8e170d4a3fde7ea4d6e1f824cd 558 PRINTS PR00681 Ribosomal protein S1 signature 36 54 5.1E-36 T 11-11-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 SHALO_RS04040 6b7e7c8e170d4a3fde7ea4d6e1f824cd 558 PRINTS PR00681 Ribosomal protein S1 signature 303 322 5.1E-36 T 11-11-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 SHALO_RS04040 6b7e7c8e170d4a3fde7ea4d6e1f824cd 558 PRINTS PR00681 Ribosomal protein S1 signature 123 139 5.1E-36 T 11-11-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 SHALO_RS04040 6b7e7c8e170d4a3fde7ea4d6e1f824cd 558 SUPERFAMILY SSF50249 273 365 3.51E-23 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold SHALO_RS04040 6b7e7c8e170d4a3fde7ea4d6e1f824cd 558 Gene3D G3DSA:2.40.50.140 283 364 1.6E-26 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold SHALO_RS04040 6b7e7c8e170d4a3fde7ea4d6e1f824cd 558 Gene3D G3DSA:2.40.50.140 366 448 2.5E-25 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold SHALO_RS04040 6b7e7c8e170d4a3fde7ea4d6e1f824cd 558 Gene3D G3DSA:2.40.50.140 21 103 7.4E-10 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold SHALO_RS04040 6b7e7c8e170d4a3fde7ea4d6e1f824cd 558 Gene3D G3DSA:2.40.50.140 450 529 1.5E-17 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold SHALO_RS04040 6b7e7c8e170d4a3fde7ea4d6e1f824cd 558 Gene3D G3DSA:2.40.50.140 112 185 3.5E-8 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold SHALO_RS04040 6b7e7c8e170d4a3fde7ea4d6e1f824cd 558 SUPERFAMILY SSF50249 122 196 5.42E-9 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold SHALO_RS04040 6b7e7c8e170d4a3fde7ea4d6e1f824cd 558 Gene3D G3DSA:2.40.50.140 206 282 1.0E-23 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold SHALO_RS04040 6b7e7c8e170d4a3fde7ea4d6e1f824cd 558 Pfam PF00575 S1 RNA binding domain 373 445 5.4E-18 T 11-11-2016 IPR003029 S1 domain GO:0003676 SHALO_RS04040 6b7e7c8e170d4a3fde7ea4d6e1f824cd 558 Pfam PF00575 S1 RNA binding domain 205 273 9.1E-17 T 11-11-2016 IPR003029 S1 domain GO:0003676 SHALO_RS04040 6b7e7c8e170d4a3fde7ea4d6e1f824cd 558 Pfam PF00575 S1 RNA binding domain 120 184 1.2E-5 T 11-11-2016 IPR003029 S1 domain GO:0003676 SHALO_RS04040 6b7e7c8e170d4a3fde7ea4d6e1f824cd 558 Pfam PF00575 S1 RNA binding domain 459 527 1.5E-12 T 11-11-2016 IPR003029 S1 domain GO:0003676 SHALO_RS04040 6b7e7c8e170d4a3fde7ea4d6e1f824cd 558 Pfam PF00575 S1 RNA binding domain 36 98 7.9E-6 T 11-11-2016 IPR003029 S1 domain GO:0003676 SHALO_RS04040 6b7e7c8e170d4a3fde7ea4d6e1f824cd 558 Pfam PF00575 S1 RNA binding domain 287 360 1.3E-19 T 11-11-2016 IPR003029 S1 domain GO:0003676 SHALO_RS04040 6b7e7c8e170d4a3fde7ea4d6e1f824cd 558 SUPERFAMILY SSF50249 29 117 2.06E-10 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold SHALO_RS04040 6b7e7c8e170d4a3fde7ea4d6e1f824cd 558 SMART SM00316 288 360 1.6E-24 T 11-11-2016 IPR022967 RNA-binding domain, S1 SHALO_RS04040 6b7e7c8e170d4a3fde7ea4d6e1f824cd 558 SMART SM00316 203 273 9.4E-19 T 11-11-2016 IPR022967 RNA-binding domain, S1 SHALO_RS04040 6b7e7c8e170d4a3fde7ea4d6e1f824cd 558 SMART SM00316 34 100 8.7E-6 T 11-11-2016 IPR022967 RNA-binding domain, S1 SHALO_RS04040 6b7e7c8e170d4a3fde7ea4d6e1f824cd 558 SMART SM00316 117 184 0.0011 T 11-11-2016 IPR022967 RNA-binding domain, S1 SHALO_RS04040 6b7e7c8e170d4a3fde7ea4d6e1f824cd 558 SMART SM00316 375 445 6.8E-23 T 11-11-2016 IPR022967 RNA-binding domain, S1 SHALO_RS04040 6b7e7c8e170d4a3fde7ea4d6e1f824cd 558 SMART SM00316 460 527 6.3E-18 T 11-11-2016 IPR022967 RNA-binding domain, S1 SHALO_RS04040 6b7e7c8e170d4a3fde7ea4d6e1f824cd 558 SUPERFAMILY SSF50249 445 551 9.29E-17 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold SHALO_RS10385 da29775483b320c3e745eae3230d4010 144 PIRSF PIRSF002889 1 141 1.5E-36 T 11-11-2016 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 SHALO_RS10385 da29775483b320c3e745eae3230d4010 144 Pfam PF00460 Flagella basal body rod protein 15 39 9.6E-7 T 11-11-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 SHALO_RS10385 da29775483b320c3e745eae3230d4010 144 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 15 35 - T 11-11-2016 IPR019776 Flagellar basal body rod protein, conserved site SHALO_RS10385 da29775483b320c3e745eae3230d4010 144 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 8 138 3.6E-31 T 11-11-2016 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 SHALO_RS12350 f2a27f505b77d78a7a59d2901f0131f5 430 Pfam PF00072 Response regulator receiver domain 4 115 9.4E-26 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS12350 f2a27f505b77d78a7a59d2901f0131f5 430 Gene3D G3DSA:3.40.50.2300 1 126 2.3E-36 T 11-11-2016 SHALO_RS12350 f2a27f505b77d78a7a59d2901f0131f5 430 SMART SM00448 2 114 3.6E-35 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS12350 f2a27f505b77d78a7a59d2901f0131f5 430 SUPERFAMILY SSF52172 1 131 1.35E-37 T 11-11-2016 IPR011006 CheY-like superfamily SHALO_RS04305 343dd2df09c699019c2a839bbc8d3365 190 Hamap MF_00235 Adenylate kinase [adk]. 3 187 32.511 T 11-11-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 SHALO_RS04305 343dd2df09c699019c2a839bbc8d3365 190 Pfam PF00406 Adenylate kinase 7 163 2.1E-33 T 11-11-2016 SHALO_RS04305 343dd2df09c699019c2a839bbc8d3365 190 SUPERFAMILY SSF52540 3 188 1.08E-29 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS04305 343dd2df09c699019c2a839bbc8d3365 190 Gene3D G3DSA:3.40.50.300 4 188 2.6E-44 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS04305 343dd2df09c699019c2a839bbc8d3365 190 PRINTS PR00094 Adenylate kinase signature 6 19 6.2E-21 T 11-11-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 SHALO_RS04305 343dd2df09c699019c2a839bbc8d3365 190 PRINTS PR00094 Adenylate kinase signature 134 149 6.2E-21 T 11-11-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 SHALO_RS04305 343dd2df09c699019c2a839bbc8d3365 190 PRINTS PR00094 Adenylate kinase signature 84 100 6.2E-21 T 11-11-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 SHALO_RS04305 343dd2df09c699019c2a839bbc8d3365 190 PRINTS PR00094 Adenylate kinase signature 36 50 6.2E-21 T 11-11-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 SHALO_RS04305 343dd2df09c699019c2a839bbc8d3365 190 ProSitePatterns PS00113 Adenylate kinase signature. 84 95 - T 11-11-2016 SHALO_RS12265 9ff0906e65284babfb5480c6bf023d76 470 Pfam PF10080 Predicted membrane protein (DUF2318) 296 397 1.1E-28 T 11-11-2016 IPR018758 Domain of unknown function DUF2318, membrane SHALO_RS12265 9ff0906e65284babfb5480c6bf023d76 470 Pfam PF04945 YHS domain 405 451 2.0E-7 T 11-11-2016 IPR007029 YHS domain SHALO_RS10985 92a0eff29ad1f128646c8e91b5e9132d 154 SUPERFAMILY SSF52121 8 154 1.31E-55 T 11-11-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 SHALO_RS10985 92a0eff29ad1f128646c8e91b5e9132d 154 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 15 150 2.1E-56 T 11-11-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 SHALO_RS10985 92a0eff29ad1f128646c8e91b5e9132d 154 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 15 151 3.0E-50 T 11-11-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 SHALO_RS10985 92a0eff29ad1f128646c8e91b5e9132d 154 Gene3D G3DSA:3.40.50.960 4 153 3.3E-57 T 11-11-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 SHALO_RS10985 92a0eff29ad1f128646c8e91b5e9132d 154 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 9 154 29.629 T 11-11-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 SHALO_RS00140 7556542de8e9bc902aab0da87233f8ea 528 Pfam PF06826 Predicted Permease Membrane Region 356 524 1.3E-36 T 11-11-2016 IPR006512 YidE/YbjL duplication SHALO_RS00140 7556542de8e9bc902aab0da87233f8ea 528 Pfam PF06826 Predicted Permease Membrane Region 9 161 2.8E-32 T 11-11-2016 IPR006512 YidE/YbjL duplication SHALO_RS00140 7556542de8e9bc902aab0da87233f8ea 528 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 361 512 1.5E-32 T 11-11-2016 IPR006512 YidE/YbjL duplication SHALO_RS00140 7556542de8e9bc902aab0da87233f8ea 528 SUPERFAMILY SSF116726 262 342 2.75E-7 T 11-11-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SHALO_RS00140 7556542de8e9bc902aab0da87233f8ea 528 Gene3D G3DSA:3.30.70.1450 201 259 1.5E-5 T 11-11-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SHALO_RS01515 1fad6be789559781f4560d42d8406559 71 PIRSF PIRSF002599 1 71 7.8E-24 T 11-11-2016 IPR012156 Cold shock, CspA GO:0003676 SHALO_RS01515 1fad6be789559781f4560d42d8406559 71 Pfam PF00313 'Cold-shock' DNA-binding domain 5 70 2.5E-27 T 11-11-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SHALO_RS01515 1fad6be789559781f4560d42d8406559 71 SUPERFAMILY SSF50249 4 70 5.57E-24 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold SHALO_RS01515 1fad6be789559781f4560d42d8406559 71 ProSitePatterns PS00352 'Cold-shock' domain signature. 17 36 - T 11-11-2016 IPR019844 Cold-shock conserved site SHALO_RS01515 1fad6be789559781f4560d42d8406559 71 SMART SM00357 5 71 9.5E-27 T 11-11-2016 IPR011129 Cold shock protein GO:0003676 SHALO_RS01515 1fad6be789559781f4560d42d8406559 71 PRINTS PR00050 Cold shock protein signature 44 62 6.7E-15 T 11-11-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SHALO_RS01515 1fad6be789559781f4560d42d8406559 71 PRINTS PR00050 Cold shock protein signature 27 36 6.7E-15 T 11-11-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SHALO_RS01515 1fad6be789559781f4560d42d8406559 71 PRINTS PR00050 Cold shock protein signature 6 21 6.7E-15 T 11-11-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SHALO_RS01515 1fad6be789559781f4560d42d8406559 71 Gene3D G3DSA:2.40.50.140 5 69 5.3E-29 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold SHALO_RS06975 02d505c349494d2a86ca29a2739cf008 403 SUPERFAMILY SSF52507 5 181 1.83E-54 T 11-11-2016 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 SHALO_RS06975 02d505c349494d2a86ca29a2739cf008 403 Pfam PF02441 Flavoprotein 9 136 8.0E-35 T 11-11-2016 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 SHALO_RS06975 02d505c349494d2a86ca29a2739cf008 403 Gene3D G3DSA:3.40.50.10300 186 401 5.8E-56 T 11-11-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 SHALO_RS06975 02d505c349494d2a86ca29a2739cf008 403 SUPERFAMILY SSF102645 174 401 1.06E-56 T 11-11-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 SHALO_RS06975 02d505c349494d2a86ca29a2739cf008 403 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 6 399 1.5E-115 T 11-11-2016 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5 SHALO_RS06975 02d505c349494d2a86ca29a2739cf008 403 Gene3D G3DSA:3.40.50.1950 4 184 7.5E-59 T 11-11-2016 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 SHALO_RS06975 02d505c349494d2a86ca29a2739cf008 403 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 189 376 7.0E-50 T 11-11-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 SHALO_RS01520 7d03f3284b6574823a2f18e29f42d0f6 389 PRINTS PR00344 Bacterial sensor protein C-terminal signature 366 379 5.9E-8 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS01520 7d03f3284b6574823a2f18e29f42d0f6 389 PRINTS PR00344 Bacterial sensor protein C-terminal signature 329 339 5.9E-8 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS01520 7d03f3284b6574823a2f18e29f42d0f6 389 PRINTS PR00344 Bacterial sensor protein C-terminal signature 313 327 5.9E-8 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS01520 7d03f3284b6574823a2f18e29f42d0f6 389 PRINTS PR00344 Bacterial sensor protein C-terminal signature 342 360 5.9E-8 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS01520 7d03f3284b6574823a2f18e29f42d0f6 389 SMART SM00388 172 233 0.0046 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS01520 7d03f3284b6574823a2f18e29f42d0f6 389 SUPERFAMILY SSF55874 238 378 1.22E-29 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS01520 7d03f3284b6574823a2f18e29f42d0f6 389 SMART SM00387 276 382 9.8E-26 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS01520 7d03f3284b6574823a2f18e29f42d0f6 389 Gene3D G3DSA:3.30.565.10 240 383 1.2E-31 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS01520 7d03f3284b6574823a2f18e29f42d0f6 389 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 278 381 9.5E-19 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS01520 7d03f3284b6574823a2f18e29f42d0f6 389 Gene3D G3DSA:1.10.287.130 172 223 6.9E-5 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS01520 7d03f3284b6574823a2f18e29f42d0f6 389 SUPERFAMILY SSF47384 160 228 1.53E-6 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS02015 afb831b7856d216f9fea59f48521ef8c 845 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 35 473 7.6E-157 T 11-11-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 SHALO_RS02015 afb831b7856d216f9fea59f48521ef8c 845 SMART SM00434 14 466 3.0E-282 T 11-11-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 SHALO_RS02015 afb831b7856d216f9fea59f48521ef8c 845 SUPERFAMILY SSF56719 34 489 7.59E-176 T 11-11-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 SHALO_RS02015 afb831b7856d216f9fea59f48521ef8c 845 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 11 810 0.0 T 11-11-2016 SHALO_RS02015 afb831b7856d216f9fea59f48521ef8c 845 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 6 811 24.377 T 11-11-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SHALO_RS02015 afb831b7856d216f9fea59f48521ef8c 845 Gene3D G3DSA:3.90.199.10 34 238 1.5E-118 T 11-11-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 SHALO_RS02015 afb831b7856d216f9fea59f48521ef8c 845 Gene3D G3DSA:3.90.199.10 335 399 1.5E-118 T 11-11-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 SHALO_RS02015 afb831b7856d216f9fea59f48521ef8c 845 SUPERFAMILY SSF101904 500 824 6.67E-105 T 11-11-2016 SHALO_RS02015 afb831b7856d216f9fea59f48521ef8c 845 Gene3D G3DSA:3.30.1360.40 239 333 1.1E-35 T 11-11-2016 IPR024946 Arginine repressor C-terminal-like domain SHALO_RS02015 afb831b7856d216f9fea59f48521ef8c 845 Gene3D G3DSA:2.120.10.90 498 808 4.1E-124 T 11-11-2016 SHALO_RS02015 afb831b7856d216f9fea59f48521ef8c 845 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 712 760 2.0E-15 T 11-11-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SHALO_RS02015 afb831b7856d216f9fea59f48521ef8c 845 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 506 550 5.6E-12 T 11-11-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SHALO_RS02015 afb831b7856d216f9fea59f48521ef8c 845 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 612 655 4.3E-12 T 11-11-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SHALO_RS02015 afb831b7856d216f9fea59f48521ef8c 845 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 661 707 2.3E-13 T 11-11-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SHALO_RS02015 afb831b7856d216f9fea59f48521ef8c 845 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 764 809 3.3E-8 T 11-11-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SHALO_RS02015 afb831b7856d216f9fea59f48521ef8c 845 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 555 604 1.2E-8 T 11-11-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SHALO_RS06415 26a70e44413ca4768238f6e5dbd6d958 211 SMART SM00448 2 113 2.8E-30 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS06415 26a70e44413ca4768238f6e5dbd6d958 211 SMART SM00862 142 208 2.2E-5 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS06415 26a70e44413ca4768238f6e5dbd6d958 211 Pfam PF00072 Response regulator receiver domain 4 113 4.2E-24 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS06415 26a70e44413ca4768238f6e5dbd6d958 211 Gene3D G3DSA:3.40.50.2300 1 120 2.1E-30 T 11-11-2016 SHALO_RS06415 26a70e44413ca4768238f6e5dbd6d958 211 SUPERFAMILY SSF52172 2 133 6.55E-32 T 11-11-2016 IPR011006 CheY-like superfamily SHALO_RS06415 26a70e44413ca4768238f6e5dbd6d958 211 Gene3D G3DSA:1.10.10.10 121 209 5.7E-10 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS06415 26a70e44413ca4768238f6e5dbd6d958 211 SUPERFAMILY SSF46894 120 209 1.56E-11 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SHALO_RS13455 4b5d7e187bfcaad45005b464006c651d 184 PRINTS PR00354 7Fe ferredoxin signature 83 100 2.3E-5 T 11-11-2016 IPR000813 7Fe ferredoxin GO:0009055 SHALO_RS13455 4b5d7e187bfcaad45005b464006c651d 184 PRINTS PR00354 7Fe ferredoxin signature 56 66 2.3E-5 T 11-11-2016 IPR000813 7Fe ferredoxin GO:0009055 SHALO_RS13455 4b5d7e187bfcaad45005b464006c651d 184 PRINTS PR00354 7Fe ferredoxin signature 66 76 2.3E-5 T 11-11-2016 IPR000813 7Fe ferredoxin GO:0009055 SHALO_RS13455 4b5d7e187bfcaad45005b464006c651d 184 Gene3D G3DSA:3.30.70.20 2 56 5.8E-9 T 11-11-2016 SHALO_RS13455 4b5d7e187bfcaad45005b464006c651d 184 Pfam PF13247 4Fe-4S dicluster domain 53 165 8.8E-12 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_RS13455 4b5d7e187bfcaad45005b464006c651d 184 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 88 99 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_RS13455 4b5d7e187bfcaad45005b464006c651d 184 SUPERFAMILY SSF54862 1 181 3.52E-49 T 11-11-2016 SHALO_RS13455 4b5d7e187bfcaad45005b464006c651d 184 Gene3D G3DSA:3.30.70.20 96 173 4.3E-14 T 11-11-2016 SHALO_RS13455 4b5d7e187bfcaad45005b464006c651d 184 Gene3D G3DSA:3.30.70.20 57 95 8.5E-16 T 11-11-2016 SHALO_RS01830 2704507966a37e701a099126245b025a 124 SUPERFAMILY SSF50022 29 124 1.17E-19 T 11-11-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 SHALO_RS01830 2704507966a37e701a099126245b025a 124 Gene3D G3DSA:2.102.10.10 10 124 1.4E-25 T 11-11-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 SHALO_RS01830 2704507966a37e701a099126245b025a 124 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 5 43 1.3E-5 T 11-11-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal SHALO_RS01830 2704507966a37e701a099126245b025a 124 Pfam PF00355 Rieske [2Fe-2S] domain 51 124 2.6E-9 T 11-11-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 SHALO_RS04335 b5b1f8efcd569d785e39becf602473cf 549 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 6 542 1.1E-217 T 11-11-2016 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 SHALO_RS04335 b5b1f8efcd569d785e39becf602473cf 549 Pfam PF02652 L-lactate permease 17 538 4.2E-206 T 11-11-2016 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 SHALO_RS02785 64729132e0affe856071a53cc16ff3c6 340 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 340 149.232 T 11-11-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 SHALO_RS02785 64729132e0affe856071a53cc16ff3c6 340 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 253 325 5.9E-26 T 11-11-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 SHALO_RS02785 64729132e0affe856071a53cc16ff3c6 340 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 4 234 1.2E-111 T 11-11-2016 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 SHALO_RS02785 64729132e0affe856071a53cc16ff3c6 340 Gene3D G3DSA:1.10.8.60 183 255 1.2E-23 T 11-11-2016 SHALO_RS02785 64729132e0affe856071a53cc16ff3c6 340 SUPERFAMILY SSF46785 256 329 9.52E-20 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS02785 64729132e0affe856071a53cc16ff3c6 340 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 251 326 3.0E-28 T 11-11-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 SHALO_RS02785 64729132e0affe856071a53cc16ff3c6 340 SMART SM00382 51 186 4.6E-12 T 11-11-2016 IPR003593 AAA+ ATPase domain SHALO_RS02785 64729132e0affe856071a53cc16ff3c6 340 Gene3D G3DSA:1.10.10.10 257 326 1.5E-26 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS02785 64729132e0affe856071a53cc16ff3c6 340 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 24 325 4.2E-136 T 11-11-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 SHALO_RS02785 64729132e0affe856071a53cc16ff3c6 340 SUPERFAMILY SSF52540 20 247 1.16E-52 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS02785 64729132e0affe856071a53cc16ff3c6 340 Gene3D G3DSA:3.40.50.300 20 178 4.6E-35 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS01905 14a8468a9116ee3c9441fc23021d7dd7 161 SUPERFAMILY SSF52304 1 149 2.22E-58 T 11-11-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 SHALO_RS01905 14a8468a9116ee3c9441fc23021d7dd7 161 PIRSF PIRSF001399 1 145 1.6E-59 T 11-11-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 SHALO_RS01905 14a8468a9116ee3c9441fc23021d7dd7 161 Gene3D G3DSA:3.40.50.9100 1 143 5.9E-61 T 11-11-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 SHALO_RS01905 14a8468a9116ee3c9441fc23021d7dd7 161 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 2 141 1.1E-64 T 11-11-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 SHALO_RS01905 14a8468a9116ee3c9441fc23021d7dd7 161 Pfam PF01220 Dehydroquinase class II 2 137 4.7E-56 T 11-11-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 SHALO_RS01905 14a8468a9116ee3c9441fc23021d7dd7 161 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 161 65.993 T 11-11-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 SHALO_RS01905 14a8468a9116ee3c9441fc23021d7dd7 161 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 3 138 3.0E-58 T 11-11-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 SHALO_RS03380 b0e31db726938c67232a15d01af67033 86 Pfam PF01016 Ribosomal L27 protein 2 81 5.6E-36 T 11-11-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS03380 b0e31db726938c67232a15d01af67033 86 PRINTS PR00063 Ribosomal protein L27 signature 54 78 2.0E-36 T 11-11-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS03380 b0e31db726938c67232a15d01af67033 86 PRINTS PR00063 Ribosomal protein L27 signature 29 53 2.0E-36 T 11-11-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS03380 b0e31db726938c67232a15d01af67033 86 PRINTS PR00063 Ribosomal protein L27 signature 4 28 2.0E-36 T 11-11-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS03380 b0e31db726938c67232a15d01af67033 86 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 81 6.3E-39 T 11-11-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS03380 b0e31db726938c67232a15d01af67033 86 SUPERFAMILY SSF110324 2 83 7.67E-32 T 11-11-2016 SHALO_RS03380 b0e31db726938c67232a15d01af67033 86 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 11-11-2016 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_RS03380 b0e31db726938c67232a15d01af67033 86 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 84 27.006 T 11-11-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS03380 b0e31db726938c67232a15d01af67033 86 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 69 4.0E-14 T 11-11-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS03380 b0e31db726938c67232a15d01af67033 86 Gene3D G3DSA:2.40.50.100 20 83 8.1E-30 T 11-11-2016 SHALO_RS00450 3b47f697d4a8d077ed8f8dfefd6fc843 556 SUPERFAMILY SSF58104 124 383 1.44E-56 T 11-11-2016 SHALO_RS00450 3b47f697d4a8d077ed8f8dfefd6fc843 556 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 184 384 2.3E-45 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SHALO_RS00450 3b47f697d4a8d077ed8f8dfefd6fc843 556 Gene3D G3DSA:1.10.287.950 141 353 7.2E-49 T 11-11-2016 SHALO_RS00450 3b47f697d4a8d077ed8f8dfefd6fc843 556 SMART SM00283 125 386 5.0E-48 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SHALO_RS11050 4a4f2546279911d240688e61b4d2d65b 220 Pfam PF02666 Phosphatidylserine decarboxylase 49 208 1.3E-4 T 11-11-2016 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 SHALO_RS04600 f7c9e589fdcb2fa7f74cf508b30e164c 587 Pfam PF00890 FAD binding domain 76 553 5.9E-44 T 11-11-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_RS04600 f7c9e589fdcb2fa7f74cf508b30e164c 587 Gene3D G3DSA:3.50.50.60 60 336 2.1E-64 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHALO_RS04600 f7c9e589fdcb2fa7f74cf508b30e164c 587 Gene3D G3DSA:3.50.50.60 516 583 2.1E-64 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHALO_RS04600 f7c9e589fdcb2fa7f74cf508b30e164c 587 SUPERFAMILY SSF56425 354 401 3.14E-20 T 11-11-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_RS04600 f7c9e589fdcb2fa7f74cf508b30e164c 587 SUPERFAMILY SSF56425 437 518 3.14E-20 T 11-11-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_RS04600 f7c9e589fdcb2fa7f74cf508b30e164c 587 Gene3D G3DSA:3.90.700.10 436 509 1.6E-26 T 11-11-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_RS04600 f7c9e589fdcb2fa7f74cf508b30e164c 587 Gene3D G3DSA:3.90.700.10 350 400 1.6E-26 T 11-11-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_RS04600 f7c9e589fdcb2fa7f74cf508b30e164c 587 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 516 531 4.2E-6 T 11-11-2016 SHALO_RS04600 f7c9e589fdcb2fa7f74cf508b30e164c 587 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 76 98 4.2E-6 T 11-11-2016 SHALO_RS04600 f7c9e589fdcb2fa7f74cf508b30e164c 587 SUPERFAMILY SSF51905 229 353 1.57E-39 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHALO_RS04600 f7c9e589fdcb2fa7f74cf508b30e164c 587 SUPERFAMILY SSF51905 68 201 1.57E-39 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHALO_RS04600 f7c9e589fdcb2fa7f74cf508b30e164c 587 SUPERFAMILY SSF51905 519 584 1.57E-39 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHALO_RS09855 94cd3fb6b7badf37773625a109fb9896 698 SUPERFAMILY SSF52540 6 163 1.3E-38 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS09855 94cd3fb6b7badf37773625a109fb9896 698 Gene3D G3DSA:3.40.50.300 4 162 1.5E-37 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS09855 94cd3fb6b7badf37773625a109fb9896 698 Pfam PF02421 Ferrous iron transport protein B 6 157 4.6E-65 T 11-11-2016 IPR011619 Ferrous iron transport protein B, N-terminal GO:0005525|GO:0015093|GO:0015684|GO:0016021 SHALO_RS09855 94cd3fb6b7badf37773625a109fb9896 698 Pfam PF07664 Ferrous iron transport protein B C terminus 458 510 1.4E-14 T 11-11-2016 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 SHALO_RS09855 94cd3fb6b7badf37773625a109fb9896 698 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 10 666 1.8E-191 T 11-11-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 SHALO_RS09855 94cd3fb6b7badf37773625a109fb9896 698 Pfam PF07670 Nucleoside recognition 515 669 1.2E-30 T 11-11-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 SHALO_RS09855 94cd3fb6b7badf37773625a109fb9896 698 Pfam PF07670 Nucleoside recognition 354 447 6.1E-14 T 11-11-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 SHALO_RS02985 1942c1006fdbc603d4a3288a0fec868a 164 PIRSF PIRSF500176 1 160 1.4E-20 T 11-11-2016 SHALO_RS02985 1942c1006fdbc603d4a3288a0fec868a 164 Pfam PF00710 Asparaginase, N-terminal 3 154 8.7E-24 T 11-11-2016 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 SHALO_RS02985 1942c1006fdbc603d4a3288a0fec868a 164 PIRSF PIRSF001220 1 158 9.6E-18 T 11-11-2016 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 SHALO_RS02985 1942c1006fdbc603d4a3288a0fec868a 164 Gene3D G3DSA:3.40.50.1170 1 158 1.1E-27 T 11-11-2016 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 SHALO_RS02985 1942c1006fdbc603d4a3288a0fec868a 164 SUPERFAMILY SSF53774 1 157 4.32E-29 T 11-11-2016 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 SHALO_RS02985 1942c1006fdbc603d4a3288a0fec868a 164 PRINTS PR00139 Asparaginase/glutaminase family signature 4 15 2.0E-6 T 11-11-2016 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 SHALO_RS02985 1942c1006fdbc603d4a3288a0fec868a 164 PRINTS PR00139 Asparaginase/glutaminase family signature 76 94 2.0E-6 T 11-11-2016 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 SHALO_RS11335 94f8a8ba623f7e4a7103f5eb37448d1f 650 Pfam PF14827 Double sensory domain of two-component sensor kinase 44 283 1.9E-36 T 11-11-2016 IPR029150 Double Cache domain 3 SHALO_RS11335 94f8a8ba623f7e4a7103f5eb37448d1f 650 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 454 648 4.8E-42 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SHALO_RS11335 94f8a8ba623f7e4a7103f5eb37448d1f 650 Gene3D G3DSA:1.10.287.950 410 591 3.1E-43 T 11-11-2016 SHALO_RS11335 94f8a8ba623f7e4a7103f5eb37448d1f 650 Pfam PF00672 HAMP domain 300 369 2.7E-9 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SHALO_RS11335 94f8a8ba623f7e4a7103f5eb37448d1f 650 SMART SM00283 381 649 2.7E-44 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SHALO_RS11335 94f8a8ba623f7e4a7103f5eb37448d1f 650 SUPERFAMILY SSF103190 57 179 8.24E-10 T 11-11-2016 IPR029151 Periplasmic sensor domain-like SHALO_RS11335 94f8a8ba623f7e4a7103f5eb37448d1f 650 SMART SM00304 319 373 1.1E-7 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SHALO_RS11335 94f8a8ba623f7e4a7103f5eb37448d1f 650 SUPERFAMILY SSF58104 341 649 8.24E-58 T 11-11-2016 SHALO_RS05845 fabed71c0f85e88223257a3099b4f0f3 159 Gene3D G3DSA:3.90.960.10 3 158 3.3E-50 T 11-11-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 SHALO_RS05845 fabed71c0f85e88223257a3099b4f0f3 159 SUPERFAMILY SSF55826 6 156 1.83E-38 T 11-11-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 SHALO_RS05845 fabed71c0f85e88223257a3099b4f0f3 159 PIRSF PIRSF006181 1 159 8.6E-57 T 11-11-2016 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC SHALO_RS05845 fabed71c0f85e88223257a3099b4f0f3 159 Pfam PF04073 Aminoacyl-tRNA editing domain 33 145 5.2E-25 T 11-11-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 SHALO_RS05845 fabed71c0f85e88223257a3099b4f0f3 159 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 6 156 2.4E-52 T 11-11-2016 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC SHALO_RS04380 6e8db6096de7e9e148b330230f7dc222 199 Pfam PF01926 50S ribosome-binding GTPase 25 153 9.9E-21 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 SHALO_RS04380 6e8db6096de7e9e148b330230f7dc222 199 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 11 194 27.721 T 11-11-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 SHALO_RS04380 6e8db6096de7e9e148b330230f7dc222 199 SUPERFAMILY SSF52540 8 193 1.72E-30 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS04380 6e8db6096de7e9e148b330230f7dc222 199 Gene3D G3DSA:3.40.50.300 11 194 1.2E-35 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS04380 6e8db6096de7e9e148b330230f7dc222 199 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 8 188 3.3E-54 T 11-11-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 SHALO_RS01845 07f69abece71922fa75738d3c7651478 142 SUPERFAMILY SSF51206 9 131 1.3E-17 T 11-11-2016 IPR018490 Cyclic nucleotide-binding-like SHALO_RS01845 07f69abece71922fa75738d3c7651478 142 Pfam PF00027 Cyclic nucleotide-binding domain 29 111 1.4E-6 T 11-11-2016 IPR000595 Cyclic nucleotide-binding domain SHALO_RS01845 07f69abece71922fa75738d3c7651478 142 Gene3D G3DSA:2.60.120.10 12 131 1.3E-14 T 11-11-2016 IPR014710 RmlC-like jelly roll fold SHALO_RS09830 fe37628a896032a9bc8430237921d96c 104 Pfam PF04341 Protein of unknown function, DUF485 10 98 1.0E-35 T 11-11-2016 IPR007436 Protein of unknown function DUF485 SHALO_RS07690 53aaaa80b8d68e2e5c4d267652212ac7 505 SUPERFAMILY SSF53790 1 254 4.32E-69 T 11-11-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 SHALO_RS07690 53aaaa80b8d68e2e5c4d267652212ac7 505 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 5 215 9.7E-42 T 11-11-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 SHALO_RS07690 53aaaa80b8d68e2e5c4d267652212ac7 505 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 4 239 2.0E-85 T 11-11-2016 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 SHALO_RS07690 53aaaa80b8d68e2e5c4d267652212ac7 505 Pfam PF02602 Uroporphyrinogen-III synthase HemD 267 460 6.4E-17 T 11-11-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 SHALO_RS07690 53aaaa80b8d68e2e5c4d267652212ac7 505 Gene3D G3DSA:3.30.950.10 120 257 2.0E-49 T 11-11-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 SHALO_RS07690 53aaaa80b8d68e2e5c4d267652212ac7 505 SUPERFAMILY SSF69618 252 461 6.02E-23 T 11-11-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 SHALO_RS07690 53aaaa80b8d68e2e5c4d267652212ac7 505 Gene3D G3DSA:3.40.50.10090 258 365 3.1E-16 T 11-11-2016 SHALO_RS07690 53aaaa80b8d68e2e5c4d267652212ac7 505 Gene3D G3DSA:3.40.1010.10 3 119 1.2E-36 T 11-11-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 SHALO_RS15045 64b55baa8a26bc7fa0a3ed8c72336482 303 SUPERFAMILY SSF53850 92 293 2.53E-21 T 11-11-2016 SHALO_RS15045 64b55baa8a26bc7fa0a3ed8c72336482 303 Gene3D G3DSA:1.10.10.10 4 76 1.6E-21 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS15045 64b55baa8a26bc7fa0a3ed8c72336482 303 Pfam PF03466 LysR substrate binding domain 96 296 1.1E-18 T 11-11-2016 IPR005119 LysR, substrate-binding SHALO_RS15045 64b55baa8a26bc7fa0a3ed8c72336482 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 1.5E-18 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SHALO_RS15045 64b55baa8a26bc7fa0a3ed8c72336482 303 SUPERFAMILY SSF46785 3 112 4.26E-20 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS15045 64b55baa8a26bc7fa0a3ed8c72336482 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 1.6E-7 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SHALO_RS15045 64b55baa8a26bc7fa0a3ed8c72336482 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 1.6E-7 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SHALO_RS15045 64b55baa8a26bc7fa0a3ed8c72336482 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 1.6E-7 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SHALO_RS15045 64b55baa8a26bc7fa0a3ed8c72336482 303 Gene3D G3DSA:3.40.190.10 96 210 8.1E-15 T 11-11-2016 SHALO_RS05285 c3461d9e3f9b398b436872dd39a6f7f9 90 SUPERFAMILY SSF143011 1 88 4.84E-14 T 11-11-2016 SHALO_RS05285 c3461d9e3f9b398b436872dd39a6f7f9 90 Pfam PF05015 RelE-like toxin of type II toxin-antitoxin system HigB 3 90 1.6E-24 T 11-11-2016 IPR007711 Toxin HigB-1 SHALO_RS04480 6d77941eb49400da2a78f5a2f26a62ed 271 Gene3D G3DSA:3.30.565.10 117 268 7.7E-29 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS04480 6d77941eb49400da2a78f5a2f26a62ed 271 SUPERFAMILY SSF55874 122 266 3.67E-25 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS04480 6d77941eb49400da2a78f5a2f26a62ed 271 PRINTS PR00344 Bacterial sensor protein C-terminal signature 229 247 4.7E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS04480 6d77941eb49400da2a78f5a2f26a62ed 271 PRINTS PR00344 Bacterial sensor protein C-terminal signature 253 266 4.7E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS04480 6d77941eb49400da2a78f5a2f26a62ed 271 PRINTS PR00344 Bacterial sensor protein C-terminal signature 199 213 4.7E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS04480 6d77941eb49400da2a78f5a2f26a62ed 271 PRINTS PR00344 Bacterial sensor protein C-terminal signature 217 227 4.7E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS04480 6d77941eb49400da2a78f5a2f26a62ed 271 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 163 267 7.7E-15 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS04480 6d77941eb49400da2a78f5a2f26a62ed 271 SUPERFAMILY SSF47384 40 113 1.55E-5 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS04480 6d77941eb49400da2a78f5a2f26a62ed 271 SMART SM00387 158 269 5.4E-15 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS14755 8a4f17da45f9de91052ca88f4a8381cf 257 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 171 256 4.5E-25 T 11-11-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 SHALO_RS14755 8a4f17da45f9de91052ca88f4a8381cf 257 SUPERFAMILY SSF56176 32 173 1.69E-17 T 11-11-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 SHALO_RS14755 8a4f17da45f9de91052ca88f4a8381cf 257 Gene3D G3DSA:3.30.465.10 62 186 1.0E-23 T 11-11-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 SHALO_RS14755 8a4f17da45f9de91052ca88f4a8381cf 257 Gene3D G3DSA:3.90.78.10 187 257 4.7E-28 T 11-11-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 SHALO_RS14755 8a4f17da45f9de91052ca88f4a8381cf 257 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 257 43.019 T 11-11-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 SHALO_RS14755 8a4f17da45f9de91052ca88f4a8381cf 257 SUPERFAMILY SSF56194 172 257 2.75E-28 T 11-11-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 SHALO_RS06280 5eebf949a310c2f91fe9653a301487f0 316 SUPERFAMILY SSF103481 209 306 8.76E-5 T 11-11-2016 SHALO_RS06280 5eebf949a310c2f91fe9653a301487f0 316 Pfam PF13536 Putative multidrug resistance efflux transporter 39 303 6.2E-99 T 11-11-2016 IPR032713 Putative multidrug resistance efflux transporter SHALO_RS08475 743e56765f5fa32536635d74cff7b9c4 137 Pfam PF02082 Transcriptional regulator 4 83 1.2E-22 T 11-11-2016 IPR000944 Transcription regulator Rrf2-type SHALO_RS08475 743e56765f5fa32536635d74cff7b9c4 137 Gene3D G3DSA:1.10.10.10 4 94 1.7E-18 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS08475 743e56765f5fa32536635d74cff7b9c4 137 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 4 96 2.9E-26 T 11-11-2016 IPR000944 Transcription regulator Rrf2-type SHALO_RS08475 743e56765f5fa32536635d74cff7b9c4 137 SUPERFAMILY SSF46785 4 97 1.43E-22 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS08475 743e56765f5fa32536635d74cff7b9c4 137 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 50 68 - T 11-11-2016 IPR030489 Transcription regulator Rrf2-type, conserved site SHALO_RS05620 b7bdd9e04644b5536573fb33bc826b1f 1243 Pfam PF03160 Calx-beta domain 160 229 6.5E-14 T 11-11-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 SHALO_RS05620 b7bdd9e04644b5536573fb33bc826b1f 1243 Pfam PF03160 Calx-beta domain 242 350 3.4E-13 T 11-11-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 SHALO_RS05620 b7bdd9e04644b5536573fb33bc826b1f 1243 SUPERFAMILY SSF141072 141 266 1.22E-26 T 11-11-2016 SHALO_RS05620 b7bdd9e04644b5536573fb33bc826b1f 1243 SUPERFAMILY SSF49899 569 643 4.35E-15 T 11-11-2016 IPR013320 Concanavalin A-like lectin/glucanase domain SHALO_RS05620 b7bdd9e04644b5536573fb33bc826b1f 1243 SUPERFAMILY SSF49899 390 542 4.35E-15 T 11-11-2016 IPR013320 Concanavalin A-like lectin/glucanase domain SHALO_RS05620 b7bdd9e04644b5536573fb33bc826b1f 1243 SUPERFAMILY SSF89260 21 133 4.84E-5 T 11-11-2016 SHALO_RS05620 b7bdd9e04644b5536573fb33bc826b1f 1243 SMART SM00237 241 351 3.7E-6 T 11-11-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 SHALO_RS05620 b7bdd9e04644b5536573fb33bc826b1f 1243 SMART SM00237 132 229 3.7E-4 T 11-11-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 SHALO_RS05620 b7bdd9e04644b5536573fb33bc826b1f 1243 Gene3D G3DSA:2.60.120.380 21 135 3.5E-8 T 11-11-2016 SHALO_RS05620 b7bdd9e04644b5536573fb33bc826b1f 1243 SUPERFAMILY SSF141072 251 373 7.19E-21 T 11-11-2016 SHALO_RS12885 d5b2cd5cd4b02602861a6f2f4d5d5504 503 Pfam PF00884 Sulfatase 215 489 1.1E-45 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 SHALO_RS12885 d5b2cd5cd4b02602861a6f2f4d5d5504 503 Gene3D G3DSA:3.40.720.10 278 495 3.4E-15 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 SHALO_RS12885 d5b2cd5cd4b02602861a6f2f4d5d5504 503 SUPERFAMILY SSF53649 212 494 1.37E-21 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 SHALO_RS12885 d5b2cd5cd4b02602861a6f2f4d5d5504 503 Pfam PF08019 Domain of unknown function (DUF1705) 43 191 1.3E-36 T 11-11-2016 IPR012549 Domain of unknown function DUF1705 GO:0016021 SHALO_RS03745 ad0f305a5055d23b5185bac6effe90a6 180 Pfam PF08966 Domain of unknown function (DUF1882) 1 73 9.9E-36 T 11-11-2016 IPR015061 Domain of unknown function DUF1882 SHALO_RS03745 ad0f305a5055d23b5185bac6effe90a6 180 Gene3D G3DSA:3.90.920.20 1 180 4.0E-93 T 11-11-2016 SHALO_RS03745 ad0f305a5055d23b5185bac6effe90a6 180 SUPERFAMILY SSF56747 3 178 1.24E-89 T 11-11-2016 SHALO_RS06030 53af738256fdd7afc7165f5462fc5494 363 SMART SM00471 184 321 1.9E-9 T 11-11-2016 IPR003607 HD/PDEase domain SHALO_RS06030 53af738256fdd7afc7165f5462fc5494 363 Pfam PF01966 HD domain 190 311 1.6E-18 T 11-11-2016 IPR006674 HD domain SHALO_RS06030 53af738256fdd7afc7165f5462fc5494 363 SUPERFAMILY SSF109604 174 352 1.07E-38 T 11-11-2016 SHALO_RS06030 53af738256fdd7afc7165f5462fc5494 363 SUPERFAMILY SSF55781 6 170 2.14E-42 T 11-11-2016 IPR029016 GAF domain-like SHALO_RS06030 53af738256fdd7afc7165f5462fc5494 363 Pfam PF13185 GAF domain 22 158 4.5E-12 T 11-11-2016 IPR003018 GAF domain GO:0005515 SHALO_RS06030 53af738256fdd7afc7165f5462fc5494 363 Gene3D G3DSA:1.10.3210.10 184 349 3.0E-22 T 11-11-2016 IPR006674 HD domain SHALO_RS06030 53af738256fdd7afc7165f5462fc5494 363 Gene3D G3DSA:3.30.450.40 9 172 1.7E-48 T 11-11-2016 IPR029016 GAF domain-like SHALO_RS06030 53af738256fdd7afc7165f5462fc5494 363 SMART SM00065 23 167 5.6E-25 T 11-11-2016 IPR003018 GAF domain GO:0005515 SHALO_RS11300 c6bb85eb2388ef8f8445633d3e1b170f 472 SUPERFAMILY SSF55073 73 211 2.59E-14 T 11-11-2016 IPR029787 Nucleotide cyclase SHALO_RS11300 c6bb85eb2388ef8f8445633d3e1b170f 472 SMART SM00267 56 218 9.4E-7 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS11300 c6bb85eb2388ef8f8445633d3e1b170f 472 Gene3D G3DSA:3.20.20.450 234 466 8.6E-63 T 11-11-2016 IPR001633 EAL domain SHALO_RS11300 c6bb85eb2388ef8f8445633d3e1b170f 472 Pfam PF00990 Diguanylate cyclase, GGDEF domain 68 211 4.1E-11 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS11300 c6bb85eb2388ef8f8445633d3e1b170f 472 Gene3D G3DSA:3.30.70.270 69 221 2.8E-14 T 11-11-2016 SHALO_RS11300 c6bb85eb2388ef8f8445633d3e1b170f 472 SMART SM00052 230 472 1.5E-50 T 11-11-2016 IPR001633 EAL domain SHALO_RS11300 c6bb85eb2388ef8f8445633d3e1b170f 472 Pfam PF00563 EAL domain 237 464 1.8E-56 T 11-11-2016 IPR001633 EAL domain SHALO_RS11300 c6bb85eb2388ef8f8445633d3e1b170f 472 SUPERFAMILY SSF141868 237 466 5.23E-63 T 11-11-2016 IPR001633 EAL domain SHALO_RS02400 adffbb49da7e675824738820a7e5058d 52 Pfam PF00471 Ribosomal protein L33 3 49 3.6E-19 T 11-11-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS02400 adffbb49da7e675824738820a7e5058d 52 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 3 51 2.4E-21 T 11-11-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS02400 adffbb49da7e675824738820a7e5058d 52 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 1 49 16.775 T 11-11-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS02400 adffbb49da7e675824738820a7e5058d 52 SUPERFAMILY SSF57829 1 49 8.55E-17 T 11-11-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 SHALO_RS02400 adffbb49da7e675824738820a7e5058d 52 ProSitePatterns PS00582 Ribosomal protein L33 signature. 17 36 - T 11-11-2016 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_RS08435 60d53b8a6d071815220693305f474f73 282 SUPERFAMILY SSF52833 121 274 5.81E-21 T 11-11-2016 IPR012336 Thioredoxin-like fold SHALO_RS08435 60d53b8a6d071815220693305f474f73 282 Gene3D G3DSA:3.40.30.10 121 267 8.9E-23 T 11-11-2016 IPR012336 Thioredoxin-like fold SHALO_RS08435 60d53b8a6d071815220693305f474f73 282 Pfam PF13462 Thioredoxin 123 277 7.0E-13 T 11-11-2016 IPR012336 Thioredoxin-like fold SHALO_RS04465 a9d955c1e0266079b1c1b358c60b03af 417 Gene3D G3DSA:2.40.160.10 32 417 4.6E-47 T 11-11-2016 IPR023614 Porin domain SHALO_RS04465 a9d955c1e0266079b1c1b358c60b03af 417 Pfam PF05538 Campylobacter major outer membrane protein 1 170 3.0E-9 T 11-11-2016 IPR008439 Campylobacter major outer membrane SHALO_RS04465 a9d955c1e0266079b1c1b358c60b03af 417 SUPERFAMILY SSF56935 193 376 6.41E-5 T 11-11-2016 SHALO_RS04465 a9d955c1e0266079b1c1b358c60b03af 417 SUPERFAMILY SSF56935 34 163 6.41E-5 T 11-11-2016 SHALO_RS14875 56a45bc6fca84f6e820c9ce5c250653b 389 Gene3D G3DSA:3.20.20.450 163 386 1.4E-29 T 11-11-2016 IPR001633 EAL domain SHALO_RS14875 56a45bc6fca84f6e820c9ce5c250653b 389 SMART SM00052 159 384 1.3E-9 T 11-11-2016 IPR001633 EAL domain SHALO_RS14875 56a45bc6fca84f6e820c9ce5c250653b 389 Pfam PF00990 Diguanylate cyclase, GGDEF domain 24 124 2.5E-12 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS14875 56a45bc6fca84f6e820c9ce5c250653b 389 Pfam PF00563 EAL domain 166 385 1.5E-29 T 11-11-2016 IPR001633 EAL domain SHALO_RS14875 56a45bc6fca84f6e820c9ce5c250653b 389 SMART SM00267 1 147 3.1E-5 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS14875 56a45bc6fca84f6e820c9ce5c250653b 389 Gene3D G3DSA:3.30.70.270 3 142 7.3E-16 T 11-11-2016 SHALO_RS14875 56a45bc6fca84f6e820c9ce5c250653b 389 SUPERFAMILY SSF55073 22 146 8.63E-14 T 11-11-2016 IPR029787 Nucleotide cyclase SHALO_RS14875 56a45bc6fca84f6e820c9ce5c250653b 389 SUPERFAMILY SSF141868 166 386 4.05E-32 T 11-11-2016 IPR001633 EAL domain SHALO_RS09090 1e6844548decba03bb7db5420131d84b 160 Pfam PF03061 Thioesterase superfamily 26 99 2.0E-13 T 11-11-2016 IPR006683 Thioesterase domain Reactome: R-HSA-75105 SHALO_RS09090 1e6844548decba03bb7db5420131d84b 160 SUPERFAMILY SSF54637 6 150 1.8E-43 T 11-11-2016 IPR029069 HotDog domain SHALO_RS09090 1e6844548decba03bb7db5420131d84b 160 Gene3D G3DSA:3.10.129.10 7 151 5.6E-56 T 11-11-2016 IPR029069 HotDog domain SHALO_RS10845 611b58580c9d354fc5501a9fdf2d65f5 288 Gene3D G3DSA:3.40.50.300 20 228 5.3E-61 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS10845 611b58580c9d354fc5501a9fdf2d65f5 288 ProSitePatterns PS00211 ABC transporters family signature. 128 142 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHALO_RS10845 611b58580c9d354fc5501a9fdf2d65f5 288 SMART SM00382 27 205 1.4E-14 T 11-11-2016 IPR003593 AAA+ ATPase domain SHALO_RS10845 611b58580c9d354fc5501a9fdf2d65f5 288 SUPERFAMILY SSF52540 10 227 8.16E-63 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS10845 611b58580c9d354fc5501a9fdf2d65f5 288 Pfam PF00005 ABC transporter 20 155 7.2E-31 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_RS04965 a57890c41d2418153f95b734e926d6b6 734 SUPERFAMILY SSF109604 535 714 1.22E-38 T 11-11-2016 SHALO_RS04965 a57890c41d2418153f95b734e926d6b6 734 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 411 531 8.4E-19 T 11-11-2016 IPR000014 PAS domain SHALO_RS04965 a57890c41d2418153f95b734e926d6b6 734 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 274 388 1.3E-18 T 11-11-2016 IPR000014 PAS domain SHALO_RS04965 a57890c41d2418153f95b734e926d6b6 734 SMART SM00086 343 385 9.1E-6 T 11-11-2016 IPR001610 PAC motif SHALO_RS04965 a57890c41d2418153f95b734e926d6b6 734 SMART SM00086 482 524 0.0031 T 11-11-2016 IPR001610 PAC motif SHALO_RS04965 a57890c41d2418153f95b734e926d6b6 734 Gene3D G3DSA:3.30.450.20 424 523 2.5E-22 T 11-11-2016 SHALO_RS04965 a57890c41d2418153f95b734e926d6b6 734 Gene3D G3DSA:3.40.50.2300 138 265 2.8E-22 T 11-11-2016 SHALO_RS04965 a57890c41d2418153f95b734e926d6b6 734 SUPERFAMILY SSF52172 139 272 3.27E-22 T 11-11-2016 IPR011006 CheY-like superfamily SHALO_RS04965 a57890c41d2418153f95b734e926d6b6 734 Pfam PF08447 PAS fold 294 378 2.0E-15 T 11-11-2016 IPR013655 PAS fold-3 GO:0005515 SHALO_RS04965 a57890c41d2418153f95b734e926d6b6 734 Pfam PF08447 PAS fold 433 514 5.0E-12 T 11-11-2016 IPR013655 PAS fold-3 GO:0005515 SHALO_RS04965 a57890c41d2418153f95b734e926d6b6 734 Gene3D G3DSA:3.30.450.20 283 383 1.2E-27 T 11-11-2016 SHALO_RS04965 a57890c41d2418153f95b734e926d6b6 734 SUPERFAMILY SSF52172 16 129 1.14E-13 T 11-11-2016 IPR011006 CheY-like superfamily SHALO_RS04965 a57890c41d2418153f95b734e926d6b6 734 SMART SM00091 408 476 0.028 T 11-11-2016 IPR000014 PAS domain SHALO_RS04965 a57890c41d2418153f95b734e926d6b6 734 SMART SM00091 269 338 0.006 T 11-11-2016 IPR000014 PAS domain SHALO_RS04965 a57890c41d2418153f95b734e926d6b6 734 SMART SM00471 549 686 9.9E-11 T 11-11-2016 IPR003607 HD/PDEase domain SHALO_RS04965 a57890c41d2418153f95b734e926d6b6 734 SUPERFAMILY SSF55785 283 382 7.68E-30 T 11-11-2016 IPR000014 PAS domain SHALO_RS04965 a57890c41d2418153f95b734e926d6b6 734 Gene3D G3DSA:1.10.3210.10 532 696 1.6E-23 T 11-11-2016 IPR006674 HD domain SHALO_RS04965 a57890c41d2418153f95b734e926d6b6 734 SUPERFAMILY SSF55785 424 522 3.14E-25 T 11-11-2016 IPR000014 PAS domain SHALO_RS04965 a57890c41d2418153f95b734e926d6b6 734 Pfam PF00072 Response regulator receiver domain 140 251 4.0E-14 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS04965 a57890c41d2418153f95b734e926d6b6 734 Pfam PF00072 Response regulator receiver domain 17 121 9.3E-10 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS04965 a57890c41d2418153f95b734e926d6b6 734 Gene3D G3DSA:3.40.50.2300 16 133 2.3E-12 T 11-11-2016 SHALO_RS04965 a57890c41d2418153f95b734e926d6b6 734 Pfam PF01966 HD domain 554 676 2.9E-21 T 11-11-2016 IPR006674 HD domain SHALO_RS04965 a57890c41d2418153f95b734e926d6b6 734 SMART SM00448 138 251 1.2E-11 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS04965 a57890c41d2418153f95b734e926d6b6 734 SMART SM00448 15 125 7.2E-4 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS00660 767842f019cd2ec978455de5cb54a329 232 SUPERFAMILY SSF53041 11 131 8.37E-8 T 11-11-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 SHALO_RS00660 767842f019cd2ec978455de5cb54a329 232 Pfam PF00239 Resolvase, N terminal domain 16 130 1.1E-8 T 11-11-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 SHALO_RS00660 767842f019cd2ec978455de5cb54a329 232 SMART SM00857 3 136 0.0025 T 11-11-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 SHALO_RS00660 767842f019cd2ec978455de5cb54a329 232 Gene3D G3DSA:3.40.50.1390 14 104 1.2E-5 T 11-11-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 SHALO_RS00660 767842f019cd2ec978455de5cb54a329 232 Gene3D G3DSA:1.10.10.60 149 175 1.2E-4 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 SHALO_RS08580 3e29d278aa405c83dc028ba9deb354e1 283 PIRSF PIRSF000728 9 283 2.6E-105 T 11-11-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 SHALO_RS08580 3e29d278aa405c83dc028ba9deb354e1 283 Hamap MF_00082_B Acetylglutamate kinase [argB]. 22 283 35.41 T 11-11-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 SHALO_RS08580 3e29d278aa405c83dc028ba9deb354e1 283 TIGRFAM TIGR00761 argB: acetylglutamate kinase 25 258 2.9E-78 T 11-11-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 SHALO_RS08580 3e29d278aa405c83dc028ba9deb354e1 283 Gene3D G3DSA:3.40.1160.10 23 282 2.0E-98 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase SHALO_RS08580 3e29d278aa405c83dc028ba9deb354e1 283 PRINTS PR01469 Bacterial carbamate kinase signature 183 198 3.7E-5 T 11-11-2016 SHALO_RS08580 3e29d278aa405c83dc028ba9deb354e1 283 PRINTS PR01469 Bacterial carbamate kinase signature 233 248 3.7E-5 T 11-11-2016 SHALO_RS08580 3e29d278aa405c83dc028ba9deb354e1 283 PRINTS PR01469 Bacterial carbamate kinase signature 55 74 3.7E-5 T 11-11-2016 SHALO_RS08580 3e29d278aa405c83dc028ba9deb354e1 283 Pfam PF00696 Amino acid kinase family 24 259 3.4E-46 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase SHALO_RS08580 3e29d278aa405c83dc028ba9deb354e1 283 SUPERFAMILY SSF53633 4 282 7.33E-88 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase SHALO_RS00560 8dcd5285d4a4965266c6f316467e3025 398 Gene3D G3DSA:1.10.8.60 151 205 8.5E-8 T 11-11-2016 SHALO_RS00560 8dcd5285d4a4965266c6f316467e3025 398 Pfam PF12002 MgsA AAA+ ATPase C terminal 240 392 1.5E-54 T 11-11-2016 IPR021886 MgsA AAA+ ATPase C-terminal SHALO_RS00560 8dcd5285d4a4965266c6f316467e3025 398 SUPERFAMILY SSF52540 5 198 3.41E-42 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS00560 8dcd5285d4a4965266c6f316467e3025 398 Pfam PF16193 AAA C-terminal domain 168 239 3.6E-15 T 11-11-2016 IPR032423 AAA ATPase, C-terminal domain SHALO_RS00560 8dcd5285d4a4965266c6f316467e3025 398 Gene3D G3DSA:1.20.272.10 224 319 1.8E-42 T 11-11-2016 SHALO_RS00560 8dcd5285d4a4965266c6f316467e3025 398 SMART SM00382 38 150 2.9E-13 T 11-11-2016 IPR003593 AAA+ ATPase domain SHALO_RS00560 8dcd5285d4a4965266c6f316467e3025 398 SUPERFAMILY SSF48019 226 394 3.12E-59 T 11-11-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 SHALO_RS00560 8dcd5285d4a4965266c6f316467e3025 398 Gene3D G3DSA:3.40.50.300 9 148 7.5E-28 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS00560 8dcd5285d4a4965266c6f316467e3025 398 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 9 125 3.3E-17 T 11-11-2016 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 SHALO_RS00560 8dcd5285d4a4965266c6f316467e3025 398 Gene3D G3DSA:1.10.3710.10 321 385 2.7E-17 T 11-11-2016 SHALO_RS15065 98dd43a07ed08e88e2ed176844dda9f8 187 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 96 107 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_RS15065 98dd43a07ed08e88e2ed176844dda9f8 187 Gene3D G3DSA:3.30.70.20 76 115 6.5E-22 T 11-11-2016 SHALO_RS15065 98dd43a07ed08e88e2ed176844dda9f8 187 SUPERFAMILY SSF54862 1 186 6.59E-57 T 11-11-2016 SHALO_RS15065 98dd43a07ed08e88e2ed176844dda9f8 187 Gene3D G3DSA:3.30.70.20 116 174 3.2E-19 T 11-11-2016 SHALO_RS15065 98dd43a07ed08e88e2ed176844dda9f8 187 Pfam PF13247 4Fe-4S dicluster domain 58 153 5.1E-21 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_RS15065 98dd43a07ed08e88e2ed176844dda9f8 187 Gene3D G3DSA:3.30.70.20 8 75 6.3E-12 T 11-11-2016 SHALO_RS03180 48c8d5781ec8fb1d05680061b4ea1829 82 Gene3D G3DSA:3.40.1620.10 6 50 1.6E-4 T 11-11-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM SHALO_RS03180 48c8d5781ec8fb1d05680061b4ea1829 82 SUPERFAMILY SSF143120 1 76 3.4E-18 T 11-11-2016 SHALO_RS03180 48c8d5781ec8fb1d05680061b4ea1829 82 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 72 4.7E-17 T 11-11-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM SHALO_RS03180 48c8d5781ec8fb1d05680061b4ea1829 82 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 6 55 2.9E-7 T 11-11-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM SHALO_RS04350 33c2e04bdae3d0f6f2bba9bd093bb500 364 Gene3D G3DSA:1.10.530.10 21 162 3.1E-42 T 11-11-2016 SHALO_RS04350 33c2e04bdae3d0f6f2bba9bd093bb500 364 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 43 71 - T 11-11-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 SHALO_RS04350 33c2e04bdae3d0f6f2bba9bd093bb500 364 Pfam PF01476 LysM domain 320 362 6.3E-7 T 11-11-2016 IPR018392 LysM domain SHALO_RS04350 33c2e04bdae3d0f6f2bba9bd093bb500 364 Pfam PF01476 LysM domain 259 301 4.9E-11 T 11-11-2016 IPR018392 LysM domain SHALO_RS04350 33c2e04bdae3d0f6f2bba9bd093bb500 364 Pfam PF01476 LysM domain 191 220 0.036 T 11-11-2016 IPR018392 LysM domain SHALO_RS04350 33c2e04bdae3d0f6f2bba9bd093bb500 364 SUPERFAMILY SSF54106 257 301 2.35E-9 T 11-11-2016 IPR018392 LysM domain SHALO_RS04350 33c2e04bdae3d0f6f2bba9bd093bb500 364 Gene3D G3DSA:3.10.350.10 256 302 1.5E-14 T 11-11-2016 IPR018392 LysM domain SHALO_RS04350 33c2e04bdae3d0f6f2bba9bd093bb500 364 SUPERFAMILY SSF53955 22 162 1.24E-35 T 11-11-2016 IPR023346 Lysozyme-like domain SHALO_RS04350 33c2e04bdae3d0f6f2bba9bd093bb500 364 Pfam PF01464 Transglycosylase SLT domain 31 135 2.2E-27 T 11-11-2016 IPR008258 Transglycosylase SLT domain 1 SHALO_RS04350 33c2e04bdae3d0f6f2bba9bd093bb500 364 SUPERFAMILY SSF54106 319 362 3.92E-8 T 11-11-2016 IPR018392 LysM domain SHALO_RS04350 33c2e04bdae3d0f6f2bba9bd093bb500 364 Gene3D G3DSA:3.10.350.10 319 363 2.4E-13 T 11-11-2016 IPR018392 LysM domain SHALO_RS04350 33c2e04bdae3d0f6f2bba9bd093bb500 364 SMART SM00257 258 301 1.3E-10 T 11-11-2016 IPR018392 LysM domain SHALO_RS04350 33c2e04bdae3d0f6f2bba9bd093bb500 364 SMART SM00257 319 362 1.8E-10 T 11-11-2016 IPR018392 LysM domain SHALO_RS04350 33c2e04bdae3d0f6f2bba9bd093bb500 364 SMART SM00257 189 236 7.3 T 11-11-2016 IPR018392 LysM domain SHALO_RS14900 ed4050364a40dd38886df48e891c93c1 92 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 3 73 2.1E-24 T 11-11-2016 IPR000504 RNA recognition motif domain GO:0003676 SHALO_RS14900 ed4050364a40dd38886df48e891c93c1 92 SMART SM00360 2 75 5.9E-28 T 11-11-2016 IPR000504 RNA recognition motif domain GO:0003676 SHALO_RS14900 ed4050364a40dd38886df48e891c93c1 92 SUPERFAMILY SSF54928 2 89 1.17E-31 T 11-11-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 SHALO_RS14900 ed4050364a40dd38886df48e891c93c1 92 Gene3D G3DSA:3.30.70.330 2 86 7.2E-31 T 11-11-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 SHALO_RS09790 4c30e697db14ea8db0a3c737d47eb0f9 618 Pfam PF00140 Sigma-70 factor, region 1.2 105 136 2.3E-12 T 11-11-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SHALO_RS09790 4c30e697db14ea8db0a3c737d47eb0f9 618 Pfam PF04539 Sigma-70 region 3 462 537 4.6E-22 T 11-11-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SHALO_RS09790 4c30e697db14ea8db0a3c737d47eb0f9 618 Pfam PF04542 Sigma-70 region 2 385 452 4.3E-21 T 11-11-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SHALO_RS09790 4c30e697db14ea8db0a3c737d47eb0f9 618 SUPERFAMILY SSF88659 456 529 4.19E-16 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SHALO_RS09790 4c30e697db14ea8db0a3c737d47eb0f9 618 PRINTS PR00046 Major sigma-70 factor signature 577 592 2.2E-29 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SHALO_RS09790 4c30e697db14ea8db0a3c737d47eb0f9 618 PRINTS PR00046 Major sigma-70 factor signature 592 603 2.2E-29 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SHALO_RS09790 4c30e697db14ea8db0a3c737d47eb0f9 618 PRINTS PR00046 Major sigma-70 factor signature 407 420 2.2E-29 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SHALO_RS09790 4c30e697db14ea8db0a3c737d47eb0f9 618 PRINTS PR00046 Major sigma-70 factor signature 555 567 2.2E-29 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SHALO_RS09790 4c30e697db14ea8db0a3c737d47eb0f9 618 PRINTS PR00046 Major sigma-70 factor signature 431 439 2.2E-29 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SHALO_RS09790 4c30e697db14ea8db0a3c737d47eb0f9 618 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 407 420 - T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SHALO_RS09790 4c30e697db14ea8db0a3c737d47eb0f9 618 SUPERFAMILY SSF88946 121 450 1.88E-62 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SHALO_RS09790 4c30e697db14ea8db0a3c737d47eb0f9 618 Pfam PF04545 Sigma-70, region 4 551 605 6.4E-20 T 11-11-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SHALO_RS09790 4c30e697db14ea8db0a3c737d47eb0f9 618 Gene3D G3DSA:1.10.10.10 456 507 1.2E-17 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS09790 4c30e697db14ea8db0a3c737d47eb0f9 618 Gene3D G3DSA:1.10.601.10 118 452 4.7E-82 T 11-11-2016 SHALO_RS09790 4c30e697db14ea8db0a3c737d47eb0f9 618 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 382 605 6.4E-41 T 11-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SHALO_RS09790 4c30e697db14ea8db0a3c737d47eb0f9 618 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 380 616 8.5E-115 T 11-11-2016 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 SHALO_RS09790 4c30e697db14ea8db0a3c737d47eb0f9 618 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 577 603 - T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SHALO_RS09790 4c30e697db14ea8db0a3c737d47eb0f9 618 SUPERFAMILY SSF88659 514 615 6.17E-26 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SHALO_RS09790 4c30e697db14ea8db0a3c737d47eb0f9 618 Gene3D G3DSA:1.10.10.10 546 617 3.5E-28 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS09790 4c30e697db14ea8db0a3c737d47eb0f9 618 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 5 617 35.843 T 11-11-2016 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 SHALO_RS00800 b5650282453f768fce2666cbfa2ca9bd 537 SUPERFAMILY SSF55874 369 506 7.99E-29 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS00800 b5650282453f768fce2666cbfa2ca9bd 537 SUPERFAMILY SSF47384 295 370 1.96E-8 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS00800 b5650282453f768fce2666cbfa2ca9bd 537 Gene3D G3DSA:3.30.565.10 373 505 5.9E-31 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS00800 b5650282453f768fce2666cbfa2ca9bd 537 PRINTS PR00344 Bacterial sensor protein C-terminal signature 470 480 2.2E-8 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS00800 b5650282453f768fce2666cbfa2ca9bd 537 PRINTS PR00344 Bacterial sensor protein C-terminal signature 452 466 2.2E-8 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS00800 b5650282453f768fce2666cbfa2ca9bd 537 PRINTS PR00344 Bacterial sensor protein C-terminal signature 483 501 2.2E-8 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS00800 b5650282453f768fce2666cbfa2ca9bd 537 Pfam PF12729 Four helix bundle sensory module for signal transduction 16 70 3.5E-7 T 11-11-2016 IPR024478 4HB MCP domain SHALO_RS00800 b5650282453f768fce2666cbfa2ca9bd 537 SMART SM00387 411 533 1.0E-21 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS00800 b5650282453f768fce2666cbfa2ca9bd 537 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 413 506 1.7E-16 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS00485 0bd0a12051090cb151bed007b12878ee 449 Gene3D G3DSA:1.25.40.10 11 107 2.5E-26 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SHALO_RS00485 0bd0a12051090cb151bed007b12878ee 449 Gene3D G3DSA:1.25.40.10 108 172 3.4E-16 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SHALO_RS00485 0bd0a12051090cb151bed007b12878ee 449 Pfam PF00515 Tetratricopeptide repeat 113 146 1.7E-9 T 11-11-2016 IPR001440 Tetratricopeptide repeat 1 GO:0005515 SHALO_RS00485 0bd0a12051090cb151bed007b12878ee 449 Pfam PF13424 Tetratricopeptide repeat 45 109 2.2E-11 T 11-11-2016 SHALO_RS00485 0bd0a12051090cb151bed007b12878ee 449 SUPERFAMILY SSF53756 193 427 6.59E-20 T 11-11-2016 SHALO_RS00485 0bd0a12051090cb151bed007b12878ee 449 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 365 398 1.2E-4 T 11-11-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 SHALO_RS00485 0bd0a12051090cb151bed007b12878ee 449 SUPERFAMILY SSF48452 19 194 3.7E-38 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SHALO_RS00485 0bd0a12051090cb151bed007b12878ee 449 Gene3D G3DSA:3.40.50.2000 355 427 2.5E-10 T 11-11-2016 SHALO_RS00485 0bd0a12051090cb151bed007b12878ee 449 SMART SM00028 45 78 1.5E-6 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SHALO_RS00485 0bd0a12051090cb151bed007b12878ee 449 SMART SM00028 113 146 6.2E-8 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SHALO_RS00485 0bd0a12051090cb151bed007b12878ee 449 SMART SM00028 79 112 9.8E-6 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SHALO_RS05405 af982536c52ac57d4e4c3c1b642c52c0 208 SUPERFAMILY SSF51391 7 205 1.1E-53 T 11-11-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 SHALO_RS05405 af982536c52ac57d4e4c3c1b642c52c0 208 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 10 203 5.9E-57 T 11-11-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 SHALO_RS05405 af982536c52ac57d4e4c3c1b642c52c0 208 Gene3D G3DSA:3.20.20.70 4 207 1.4E-56 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_RS05405 af982536c52ac57d4e4c3c1b642c52c0 208 Pfam PF02581 Thiamine monophosphate synthase/TENI 10 191 2.8E-55 T 11-11-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 SHALO_RS05405 af982536c52ac57d4e4c3c1b642c52c0 208 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 7 205 23.084 T 11-11-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 SHALO_RS00850 927b1707d48a339ff0ce8a61a4aff0cb 321 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 138 316 3.5E-18 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHALO_RS00850 927b1707d48a339ff0ce8a61a4aff0cb 321 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 114 210 6.1E-25 T 11-11-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 SHALO_RS00850 927b1707d48a339ff0ce8a61a4aff0cb 321 SUPERFAMILY SSF161098 117 307 1.06E-43 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHALO_RS00850 927b1707d48a339ff0ce8a61a4aff0cb 321 Gene3D G3DSA:1.10.3720.10 115 317 2.6E-49 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHALO_RS08125 68cce11a93370928e7c5dbbd362f06ed 614 PIRSF PIRSF001336 1 607 7.8E-211 T 11-11-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SHALO_RS08125 68cce11a93370928e7c5dbbd362f06ed 614 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 316 335 7.8E-17 T 11-11-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 SHALO_RS08125 68cce11a93370928e7c5dbbd362f06ed 614 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 106 118 7.8E-17 T 11-11-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 SHALO_RS08125 68cce11a93370928e7c5dbbd362f06ed 614 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 82 100 7.8E-17 T 11-11-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 SHALO_RS08125 68cce11a93370928e7c5dbbd362f06ed 614 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 515 528 7.8E-17 T 11-11-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 SHALO_RS08125 68cce11a93370928e7c5dbbd362f06ed 614 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 223 236 7.8E-17 T 11-11-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 SHALO_RS08125 68cce11a93370928e7c5dbbd362f06ed 614 Gene3D G3DSA:2.40.37.10 308 339 1.9E-15 T 11-11-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 SHALO_RS08125 68cce11a93370928e7c5dbbd362f06ed 614 Gene3D G3DSA:2.40.37.10 432 559 1.9E-15 T 11-11-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 SHALO_RS08125 68cce11a93370928e7c5dbbd362f06ed 614 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 61 327 2.5E-38 T 11-11-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 SHALO_RS08125 68cce11a93370928e7c5dbbd362f06ed 614 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 434 533 1.1E-21 T 11-11-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 SHALO_RS08125 68cce11a93370928e7c5dbbd362f06ed 614 SUPERFAMILY SSF51419 50 328 2.24E-56 T 11-11-2016 IPR029066 PLP-binding barrel SHALO_RS08125 68cce11a93370928e7c5dbbd362f06ed 614 TIGRFAM TIGR01273 speA: arginine decarboxylase 2 605 2.0E-212 T 11-11-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SHALO_RS08125 68cce11a93370928e7c5dbbd362f06ed 614 Gene3D G3DSA:3.20.20.10 55 307 2.1E-43 T 11-11-2016 IPR029066 PLP-binding barrel SHALO_RS08125 68cce11a93370928e7c5dbbd362f06ed 614 PRINTS PR01180 Arginine decarboxylase signature 306 323 1.5E-41 T 11-11-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SHALO_RS08125 68cce11a93370928e7c5dbbd362f06ed 614 PRINTS PR01180 Arginine decarboxylase signature 129 144 1.5E-41 T 11-11-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SHALO_RS08125 68cce11a93370928e7c5dbbd362f06ed 614 PRINTS PR01180 Arginine decarboxylase signature 50 65 1.5E-41 T 11-11-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SHALO_RS08125 68cce11a93370928e7c5dbbd362f06ed 614 PRINTS PR01180 Arginine decarboxylase signature 74 88 1.5E-41 T 11-11-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SHALO_RS08125 68cce11a93370928e7c5dbbd362f06ed 614 PRINTS PR01180 Arginine decarboxylase signature 515 536 1.5E-41 T 11-11-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SHALO_RS08125 68cce11a93370928e7c5dbbd362f06ed 614 PRINTS PR01180 Arginine decarboxylase signature 466 491 1.5E-41 T 11-11-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SHALO_RS08125 68cce11a93370928e7c5dbbd362f06ed 614 PRINTS PR01180 Arginine decarboxylase signature 180 202 1.5E-41 T 11-11-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SHALO_RS08125 68cce11a93370928e7c5dbbd362f06ed 614 PRINTS PR01180 Arginine decarboxylase signature 441 462 1.5E-41 T 11-11-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SHALO_RS08125 68cce11a93370928e7c5dbbd362f06ed 614 SUPERFAMILY SSF50621 424 545 1.73E-13 T 11-11-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 SHALO_RS08125 68cce11a93370928e7c5dbbd362f06ed 614 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 82 100 - T 11-11-2016 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site SHALO_RS03130 54ab99bb928701cc994ab9c52debf153 187 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 28 156 1.3E-30 T 11-11-2016 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component SHALO_RS13800 c692b670ce821a5835b313fb801316bb 160 Pfam PF08281 Sigma-70, region 4 97 141 1.1E-9 T 11-11-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SHALO_RS13800 c692b670ce821a5835b313fb801316bb 160 Gene3D G3DSA:1.10.10.10 94 153 1.2E-12 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS13800 c692b670ce821a5835b313fb801316bb 160 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 3 151 1.7E-19 T 11-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SHALO_RS13800 c692b670ce821a5835b313fb801316bb 160 SUPERFAMILY SSF88946 2 76 4.32E-12 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SHALO_RS13800 c692b670ce821a5835b313fb801316bb 160 SUPERFAMILY SSF88659 94 153 2.62E-12 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SHALO_RS13800 c692b670ce821a5835b313fb801316bb 160 Gene3D G3DSA:1.10.1740.10 3 67 4.1E-12 T 11-11-2016 SHALO_RS13800 c692b670ce821a5835b313fb801316bb 160 Pfam PF04542 Sigma-70 region 2 3 66 2.3E-9 T 11-11-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SHALO_RS09965 bf4f0ae50854e7de873e3c02cf65b378 703 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 10 672 9.3E-244 T 11-11-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 SHALO_RS09965 bf4f0ae50854e7de873e3c02cf65b378 703 SUPERFAMILY SSF56024 501 681 1.53E-65 T 11-11-2016 SHALO_RS09965 bf4f0ae50854e7de873e3c02cf65b378 703 Pfam PF13090 Polyphosphate kinase C-terminal domain 329 671 5.1E-147 T 11-11-2016 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 SHALO_RS09965 bf4f0ae50854e7de873e3c02cf65b378 703 Hamap MF_00347 Polyphosphate kinase [ppk]. 7 678 33.876 T 11-11-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 SHALO_RS09965 bf4f0ae50854e7de873e3c02cf65b378 703 SUPERFAMILY SSF56024 313 494 5.1E-53 T 11-11-2016 SHALO_RS09965 bf4f0ae50854e7de873e3c02cf65b378 703 Gene3D G3DSA:3.30.870.10 500 679 2.2E-66 T 11-11-2016 SHALO_RS09965 bf4f0ae50854e7de873e3c02cf65b378 703 Gene3D G3DSA:3.30.1840.10 112 299 2.5E-56 T 11-11-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 SHALO_RS09965 bf4f0ae50854e7de873e3c02cf65b378 703 Gene3D G3DSA:3.30.870.10 314 499 5.3E-70 T 11-11-2016 SHALO_RS09965 bf4f0ae50854e7de873e3c02cf65b378 703 Pfam PF02503 Polyphosphate kinase middle domain 128 319 5.7E-58 T 11-11-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 SHALO_RS09965 bf4f0ae50854e7de873e3c02cf65b378 703 SUPERFAMILY SSF140356 7 111 2.22E-33 T 11-11-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 SHALO_RS09965 bf4f0ae50854e7de873e3c02cf65b378 703 Pfam PF13089 Polyphosphate kinase N-terminal domain 10 114 2.0E-32 T 11-11-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 SHALO_RS09965 bf4f0ae50854e7de873e3c02cf65b378 703 PIRSF PIRSF015589 1 693 1.1E-268 T 11-11-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 SHALO_RS09965 bf4f0ae50854e7de873e3c02cf65b378 703 SUPERFAMILY SSF143724 113 304 2.75E-54 T 11-11-2016 SHALO_RS05795 7adb4915a1081a873f91dcb3d947907d 219 SUPERFAMILY SSF51306 94 214 2.62E-19 T 11-11-2016 IPR015927 Peptidase S24/S26A/S26B/S26C SHALO_RS05795 7adb4915a1081a873f91dcb3d947907d 219 Gene3D G3DSA:2.10.109.10 94 214 3.0E-19 T 11-11-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain SHALO_RS05795 7adb4915a1081a873f91dcb3d947907d 219 Pfam PF00717 Peptidase S24-like 135 202 3.1E-11 T 11-11-2016 IPR019759 Peptidase S24/S26A/S26B SHALO_RS05795 7adb4915a1081a873f91dcb3d947907d 219 ProSitePatterns PS00501 Signal peptidases I serine active site. 137 144 - T 11-11-2016 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 SHALO_RS01170 f99ddfe9445153f7523d65ecbd957778 263 SUPERFAMILY SSF51161 3 254 5.94E-70 T 11-11-2016 IPR011004 Trimeric LpxA-like SHALO_RS01170 f99ddfe9445153f7523d65ecbd957778 263 PIRSF PIRSF000456 1 263 1.2E-98 T 11-11-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 SHALO_RS01170 f99ddfe9445153f7523d65ecbd957778 263 Gene3D G3DSA:2.160.10.10 3 188 1.5E-45 T 11-11-2016 SHALO_RS01170 f99ddfe9445153f7523d65ecbd957778 263 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 3 29 2.1E-4 T 11-11-2016 IPR001451 Hexapeptide repeat SHALO_RS01170 f99ddfe9445153f7523d65ecbd957778 263 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 105 139 1.8E-7 T 11-11-2016 IPR001451 Hexapeptide repeat SHALO_RS01170 f99ddfe9445153f7523d65ecbd957778 263 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 32 65 8.5E-5 T 11-11-2016 IPR001451 Hexapeptide repeat SHALO_RS01170 f99ddfe9445153f7523d65ecbd957778 263 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 176 254 6.3E-23 T 11-11-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 SHALO_RS01170 f99ddfe9445153f7523d65ecbd957778 263 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 4 254 1.0E-99 T 11-11-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 SHALO_RS01170 f99ddfe9445153f7523d65ecbd957778 263 Gene3D G3DSA:1.20.1180.10 194 261 5.2E-24 T 11-11-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 SHALO_RS01170 f99ddfe9445153f7523d65ecbd957778 263 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 149 177 - T 11-11-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 SHALO_RS01170 f99ddfe9445153f7523d65ecbd957778 263 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 1 256 42.659 T 11-11-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 SHALO_RS03980 7886736e518ae53959fc7b412cf7bcb4 450 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 8 442 3.6E-94 T 11-11-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit SHALO_RS03980 7886736e518ae53959fc7b412cf7bcb4 450 PIRSF PIRSF006066 1 450 7.9E-66 T 11-11-2016 IPR004681 TRAP transporter permease protein GO:0016021 SHALO_RS03980 7886736e518ae53959fc7b412cf7bcb4 450 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 58 442 5.7E-101 T 11-11-2016 IPR004681 TRAP transporter permease protein GO:0016021 SHALO_RS03800 a876e2f036ba1f1d14e0346b26501af6 208 Pfam PF03309 Type III pantothenate kinase 69 163 8.0E-11 T 11-11-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 SHALO_RS03800 a876e2f036ba1f1d14e0346b26501af6 208 SUPERFAMILY SSF53067 84 202 9.06E-24 T 11-11-2016 SHALO_RS03800 a876e2f036ba1f1d14e0346b26501af6 208 Gene3D G3DSA:3.30.420.40 67 204 2.0E-32 T 11-11-2016 SHALO_RS03800 a876e2f036ba1f1d14e0346b26501af6 208 SUPERFAMILY SSF53067 1 82 2.27E-30 T 11-11-2016 SHALO_RS03800 a876e2f036ba1f1d14e0346b26501af6 208 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 1 199 1.7E-21 T 11-11-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 SHALO_RS03800 a876e2f036ba1f1d14e0346b26501af6 208 Gene3D G3DSA:3.30.420.40 1 58 7.4E-24 T 11-11-2016 SHALO_RS01135 74e101b41a0aa248210cd4f6686fcb20 364 SMART SM00244 63 247 3.5E-25 T 11-11-2016 IPR001107 Band 7 domain SHALO_RS01135 74e101b41a0aa248210cd4f6686fcb20 364 SUPERFAMILY SSF117892 95 252 2.62E-13 T 11-11-2016 IPR001107 Band 7 domain SHALO_RS01135 74e101b41a0aa248210cd4f6686fcb20 364 Pfam PF01145 SPFH domain / Band 7 family 67 267 2.9E-26 T 11-11-2016 IPR001107 Band 7 domain SHALO_RS01135 74e101b41a0aa248210cd4f6686fcb20 364 PRINTS PR00679 Prohibitin signature 145 164 1.7E-14 T 11-11-2016 IPR000163 Prohibitin GO:0016020 SHALO_RS01135 74e101b41a0aa248210cd4f6686fcb20 364 PRINTS PR00679 Prohibitin signature 191 207 1.7E-14 T 11-11-2016 IPR000163 Prohibitin GO:0016020 SHALO_RS01135 74e101b41a0aa248210cd4f6686fcb20 364 PRINTS PR00679 Prohibitin signature 168 186 1.7E-14 T 11-11-2016 IPR000163 Prohibitin GO:0016020 SHALO_RS01135 74e101b41a0aa248210cd4f6686fcb20 364 PRINTS PR00679 Prohibitin signature 242 265 1.7E-14 T 11-11-2016 IPR000163 Prohibitin GO:0016020 SHALO_RS01135 74e101b41a0aa248210cd4f6686fcb20 364 PRINTS PR00679 Prohibitin signature 265 281 1.7E-14 T 11-11-2016 IPR000163 Prohibitin GO:0016020 SHALO_RS12150 5135f92db10c49ee0d73ad86576eac8d 118 SUPERFAMILY SSF53137 9 116 1.12E-36 T 11-11-2016 SHALO_RS12150 5135f92db10c49ee0d73ad86576eac8d 118 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 8 118 22.754 T 11-11-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_RS12150 5135f92db10c49ee0d73ad86576eac8d 118 Gene3D G3DSA:3.30.420.100 26 117 3.9E-24 T 11-11-2016 SHALO_RS12150 5135f92db10c49ee0d73ad86576eac8d 118 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 11 117 3.0E-35 T 11-11-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_RS12150 5135f92db10c49ee0d73ad86576eac8d 118 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 9 116 4.2E-35 T 11-11-2016 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS13365 6e07dea6c83f6ce356f836b15232134c 181 Pfam PF01152 Bacterial-like globin 45 157 1.8E-10 T 11-11-2016 IPR001486 Truncated hemoglobin GO:0019825 SHALO_RS13365 6e07dea6c83f6ce356f836b15232134c 181 SUPERFAMILY SSF46458 45 158 1.08E-14 T 11-11-2016 IPR009050 Globin-like SHALO_RS13365 6e07dea6c83f6ce356f836b15232134c 181 Gene3D G3DSA:1.10.490.10 41 161 2.2E-21 T 11-11-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 SHALO_RS01585 c194ca2053426a5ca4dacff5452a03a8 322 Gene3D G3DSA:1.20.1630.10 15 303 3.2E-12 T 11-11-2016 SHALO_RS01585 c194ca2053426a5ca4dacff5452a03a8 322 Pfam PF03916 Polysulphide reductase, NrfD 9 320 6.2E-69 T 11-11-2016 IPR005614 NrfD family SHALO_RS11605 7213d8d54d564c17dd8a2d032b17584a 465 Gene3D G3DSA:1.10.3080.10 12 405 8.0E-60 T 11-11-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 SHALO_RS11605 7213d8d54d564c17dd8a2d032b17584a 465 SUPERFAMILY SSF81340 5 409 8.11E-82 T 11-11-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 SHALO_RS11605 7213d8d54d564c17dd8a2d032b17584a 465 Pfam PF00654 Voltage gated chloride channel 62 400 3.5E-73 T 11-11-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 SHALO_RS11605 7213d8d54d564c17dd8a2d032b17584a 465 PRINTS PR00762 Chloride channel signature 103 122 4.9E-20 T 11-11-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 SHALO_RS11605 7213d8d54d564c17dd8a2d032b17584a 465 PRINTS PR00762 Chloride channel signature 323 343 4.9E-20 T 11-11-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 SHALO_RS11605 7213d8d54d564c17dd8a2d032b17584a 465 PRINTS PR00762 Chloride channel signature 351 367 4.9E-20 T 11-11-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 SHALO_RS11605 7213d8d54d564c17dd8a2d032b17584a 465 PRINTS PR00762 Chloride channel signature 154 173 4.9E-20 T 11-11-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 SHALO_RS01250 8e7f480e5023db69c57b644fe008091a 316 Pfam PF00072 Response regulator receiver domain 185 294 3.2E-14 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS01250 8e7f480e5023db69c57b644fe008091a 316 SUPERFAMILY SSF52172 183 309 2.7E-23 T 11-11-2016 IPR011006 CheY-like superfamily SHALO_RS01250 8e7f480e5023db69c57b644fe008091a 316 PIRSF PIRSF002867 1 312 1.1E-96 T 11-11-2016 IPR024181 Chemotaxis response regulator CheV SHALO_RS01250 8e7f480e5023db69c57b644fe008091a 316 SMART SM00448 182 308 5.2E-19 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS01250 8e7f480e5023db69c57b644fe008091a 316 Gene3D G3DSA:2.40.50.180 62 99 8.1E-7 T 11-11-2016 SHALO_RS01250 8e7f480e5023db69c57b644fe008091a 316 SUPERFAMILY SSF50341 12 162 1.7E-29 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SHALO_RS01250 8e7f480e5023db69c57b644fe008091a 316 Pfam PF01584 CheW-like domain 32 162 7.7E-35 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SHALO_RS01250 8e7f480e5023db69c57b644fe008091a 316 Gene3D G3DSA:2.30.30.40 100 147 2.4E-7 T 11-11-2016 SHALO_RS01250 8e7f480e5023db69c57b644fe008091a 316 Gene3D G3DSA:3.40.50.2300 184 312 7.3E-25 T 11-11-2016 SHALO_RS01250 8e7f480e5023db69c57b644fe008091a 316 SMART SM00260 11 160 1.6E-35 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SHALO_RS07950 1fc10bd6f329e8f71da9992c92ea9e38 192 SUPERFAMILY SSF52540 4 191 4.42E-47 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS07950 1fc10bd6f329e8f71da9992c92ea9e38 192 Pfam PF00005 ABC transporter 22 147 4.2E-25 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_RS07950 1fc10bd6f329e8f71da9992c92ea9e38 192 Gene3D G3DSA:3.40.50.300 3 191 2.7E-48 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS07950 1fc10bd6f329e8f71da9992c92ea9e38 192 SMART SM00382 31 192 6.1E-9 T 11-11-2016 IPR003593 AAA+ ATPase domain SHALO_RS07390 3f46c0b79f15edfa06859cdc12ab0918 181 Pfam PF00227 Proteasome subunit 2 174 2.9E-23 T 11-11-2016 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5687128|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-983168 SHALO_RS07390 3f46c0b79f15edfa06859cdc12ab0918 181 Gene3D G3DSA:3.60.20.10 5 177 3.5E-74 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SHALO_RS07390 3f46c0b79f15edfa06859cdc12ab0918 181 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 4 176 38.359 T 11-11-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 SHALO_RS07390 3f46c0b79f15edfa06859cdc12ab0918 181 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 5 172 5.5E-75 T 11-11-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 SHALO_RS07390 3f46c0b79f15edfa06859cdc12ab0918 181 SUPERFAMILY SSF56235 2 176 4.89E-52 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SHALO_RS07390 3f46c0b79f15edfa06859cdc12ab0918 181 PIRSF PIRSF039093 1 179 1.3E-79 T 11-11-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 SHALO_RS10640 344bda1f95c7190fb9fab358362868f5 413 Pfam PF08668 HDOD domain 217 322 3.9E-7 T 11-11-2016 IPR013976 Metal-dependent hydrolase HDOD SHALO_RS10640 344bda1f95c7190fb9fab358362868f5 413 SUPERFAMILY SSF141868 5 198 1.03E-26 T 11-11-2016 IPR001633 EAL domain SHALO_RS10640 344bda1f95c7190fb9fab358362868f5 413 Gene3D G3DSA:1.10.3150.10 187 356 7.6E-24 T 11-11-2016 IPR013976 Metal-dependent hydrolase HDOD SHALO_RS10640 344bda1f95c7190fb9fab358362868f5 413 Gene3D G3DSA:3.20.20.450 81 186 1.1E-8 T 11-11-2016 IPR001633 EAL domain SHALO_RS10640 344bda1f95c7190fb9fab358362868f5 413 SUPERFAMILY SSF109604 186 369 6.91E-24 T 11-11-2016 SHALO_RS10640 344bda1f95c7190fb9fab358362868f5 413 PIRSF PIRSF003180 1 410 2.1E-102 T 11-11-2016 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing SHALO_RS10640 344bda1f95c7190fb9fab358362868f5 413 Pfam PF00563 EAL domain 59 195 1.2E-13 T 11-11-2016 IPR001633 EAL domain SHALO_RS00710 f7883632ae169368136dbd9d2e3cbf6f 445 Gene3D G3DSA:1.10.760.10 271 284 5.7E-6 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS00710 f7883632ae169368136dbd9d2e3cbf6f 445 Gene3D G3DSA:1.10.760.10 363 444 5.7E-6 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS00710 f7883632ae169368136dbd9d2e3cbf6f 445 SUPERFAMILY SSF46626 262 278 1.49E-9 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS00710 f7883632ae169368136dbd9d2e3cbf6f 445 SUPERFAMILY SSF46626 363 444 1.49E-9 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS00885 8038d96f9820709115d9f63c02c661fa 253 SMART SM00382 29 213 3.8E-15 T 11-11-2016 IPR003593 AAA+ ATPase domain SHALO_RS00885 8038d96f9820709115d9f63c02c661fa 253 Gene3D G3DSA:3.40.50.300 3 225 1.7E-56 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS00885 8038d96f9820709115d9f63c02c661fa 253 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHALO_RS00885 8038d96f9820709115d9f63c02c661fa 253 SUPERFAMILY SSF52540 5 222 3.62E-54 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS00885 8038d96f9820709115d9f63c02c661fa 253 Pfam PF00005 ABC transporter 20 166 7.8E-31 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_RS11420 6e0bcc83460b9af2410306da6a6124dc 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 5.7E-41 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_RS11420 6e0bcc83460b9af2410306da6a6124dc 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 5.7E-41 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_RS11420 6e0bcc83460b9af2410306da6a6124dc 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 5.7E-41 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_RS11420 6e0bcc83460b9af2410306da6a6124dc 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 5.7E-41 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_RS11420 6e0bcc83460b9af2410306da6a6124dc 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 5.7E-41 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_RS11420 6e0bcc83460b9af2410306da6a6124dc 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 5.7E-41 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_RS11420 6e0bcc83460b9af2410306da6a6124dc 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 7.5E-12 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_RS11420 6e0bcc83460b9af2410306da6a6124dc 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 7.5E-12 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_RS11420 6e0bcc83460b9af2410306da6a6124dc 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 7.5E-12 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_RS11420 6e0bcc83460b9af2410306da6a6124dc 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 11-11-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 SHALO_RS11420 6e0bcc83460b9af2410306da6a6124dc 247 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 8 246 5.3E-96 T 11-11-2016 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 SHALO_RS11420 6e0bcc83460b9af2410306da6a6124dc 247 Gene3D G3DSA:3.40.50.720 2 247 4.5E-82 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS11420 6e0bcc83460b9af2410306da6a6124dc 247 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 191 5.0E-5 T 11-11-2016 SHALO_RS11420 6e0bcc83460b9af2410306da6a6124dc 247 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 245 1.6E-62 T 11-11-2016 SHALO_RS11420 6e0bcc83460b9af2410306da6a6124dc 247 SUPERFAMILY SSF51735 5 247 5.41E-79 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS00925 3673d2488a8b63fcd81d77f0d73e373c 129 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 6 126 16.655 T 11-11-2016 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 SHALO_RS00925 3673d2488a8b63fcd81d77f0d73e373c 129 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 33 125 9.7E-32 T 11-11-2016 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS11205 5e373bc87a437332bbe90f55d40007f6 340 Gene3D G3DSA:3.40.50.720 2 196 1.6E-65 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS11205 5e373bc87a437332bbe90f55d40007f6 340 SUPERFAMILY SSF51735 2 336 1.75E-86 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS11205 5e373bc87a437332bbe90f55d40007f6 340 Pfam PF16363 GDP-mannose 4,6 dehydratase 7 326 6.7E-95 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS11205 5e373bc87a437332bbe90f55d40007f6 340 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 6 335 7.2E-141 T 11-11-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 SHALO_RS11205 5e373bc87a437332bbe90f55d40007f6 340 Gene3D G3DSA:3.90.25.10 197 336 2.2E-47 T 11-11-2016 SHALO_RS00045 9e9cf1b082be3bed1fbc317a3049e994 315 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 33 160 1.1E-14 T 11-11-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 SHALO_RS00045 9e9cf1b082be3bed1fbc317a3049e994 315 Pfam PF14815 NUDIX domain 223 309 1.4E-10 T 11-11-2016 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 SHALO_RS00045 9e9cf1b082be3bed1fbc317a3049e994 315 SUPERFAMILY SSF48150 5 201 4.4E-58 T 11-11-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 SHALO_RS00045 9e9cf1b082be3bed1fbc317a3049e994 315 Gene3D G3DSA:1.10.340.30 18 116 4.2E-31 T 11-11-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 SHALO_RS00045 9e9cf1b082be3bed1fbc317a3049e994 315 Gene3D G3DSA:1.10.1670.10 117 209 2.8E-32 T 11-11-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 SHALO_RS00045 9e9cf1b082be3bed1fbc317a3049e994 315 SMART SM00478 36 179 2.5E-32 T 11-11-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 SHALO_RS00045 9e9cf1b082be3bed1fbc317a3049e994 315 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 4 253 9.0E-89 T 11-11-2016 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 SHALO_RS00045 9e9cf1b082be3bed1fbc317a3049e994 315 Gene3D G3DSA:3.90.79.10 217 311 1.6E-7 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SHALO_RS00045 9e9cf1b082be3bed1fbc317a3049e994 315 SUPERFAMILY SSF55811 207 311 1.42E-9 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SHALO_RS00935 7d2a4c05e9eaaea29214a506cb10035b 266 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 38 189 24.85 T 11-11-2016 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS00935 7d2a4c05e9eaaea29214a506cb10035b 266 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 115 177 2.0E-18 T 11-11-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS00935 7d2a4c05e9eaaea29214a506cb10035b 266 ProSitePatterns PS00542 Respiratory chain NADH dehydrogenase 30 Kd subunit signature. 142 163 - T 11-11-2016 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS00935 7d2a4c05e9eaaea29214a506cb10035b 266 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 62 180 1.2E-39 T 11-11-2016 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS00935 7d2a4c05e9eaaea29214a506cb10035b 266 SUPERFAMILY SSF143243 44 213 3.01E-47 T 11-11-2016 SHALO_RS00935 7d2a4c05e9eaaea29214a506cb10035b 266 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 63 182 7.5E-37 T 11-11-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS04975 a0808e57bd1b491711174546851447ed 86 SMART SM00530 22 80 5.1E-4 T 11-11-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SHALO_RS04975 a0808e57bd1b491711174546851447ed 86 Pfam PF12844 Helix-turn-helix domain 22 82 6.0E-9 T 11-11-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SHALO_RS04975 a0808e57bd1b491711174546851447ed 86 Gene3D G3DSA:1.10.260.40 19 82 2.2E-10 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SHALO_RS04975 a0808e57bd1b491711174546851447ed 86 SUPERFAMILY SSF47413 13 83 1.45E-9 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SHALO_RS12790 d8b74beb01eeb22c28aba0c4102837c8 168 Pfam PF06226 Protein of unknown function (DUF1007) 5 141 7.6E-23 T 11-11-2016 IPR010412 Protein of unknown function DUF1007 SHALO_RS12895 ffc9d861e5bb134eb52ecab8f3ce74bc 395 Gene3D G3DSA:3.30.450.20 298 395 1.7E-12 T 11-11-2016 SHALO_RS12895 ffc9d861e5bb134eb52ecab8f3ce74bc 395 Gene3D G3DSA:3.20.20.450 4 236 1.9E-50 T 11-11-2016 IPR001633 EAL domain SHALO_RS12895 ffc9d861e5bb134eb52ecab8f3ce74bc 395 SUPERFAMILY SSF141868 4 236 5.23E-57 T 11-11-2016 IPR001633 EAL domain SHALO_RS12895 ffc9d861e5bb134eb52ecab8f3ce74bc 395 Pfam PF00563 EAL domain 4 235 5.2E-50 T 11-11-2016 IPR001633 EAL domain SHALO_RS12895 ffc9d861e5bb134eb52ecab8f3ce74bc 395 SUPERFAMILY SSF103190 263 394 9.42E-14 T 11-11-2016 IPR029151 Periplasmic sensor domain-like SHALO_RS12895 ffc9d861e5bb134eb52ecab8f3ce74bc 395 SMART SM00052 2 240 2.4E-21 T 11-11-2016 IPR001633 EAL domain SHALO_RS02000 6795c6f30296a41b06120ad01b715579 190 Gene3D G3DSA:3.40.50.2020 74 188 1.9E-10 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like SHALO_RS02000 6795c6f30296a41b06120ad01b715579 190 Pfam PF00156 Phosphoribosyl transferase domain 151 188 2.0E-6 T 11-11-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 SHALO_RS02000 6795c6f30296a41b06120ad01b715579 190 SUPERFAMILY SSF53271 46 189 9.35E-14 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like SHALO_RS12375 5c438747c06cfc363effd73ee5c4a219 276 SUPERFAMILY SSF53335 77 270 1.94E-45 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS12375 5c438747c06cfc363effd73ee5c4a219 276 Pfam PF03705 CheR methyltransferase, all-alpha domain 10 62 2.5E-16 T 11-11-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal SHALO_RS12375 5c438747c06cfc363effd73ee5c4a219 276 PRINTS PR00996 Glutamate methyltransferase family signature 31 44 2.4E-40 T 11-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SHALO_RS12375 5c438747c06cfc363effd73ee5c4a219 276 PRINTS PR00996 Glutamate methyltransferase family signature 235 258 2.4E-40 T 11-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SHALO_RS12375 5c438747c06cfc363effd73ee5c4a219 276 PRINTS PR00996 Glutamate methyltransferase family signature 107 127 2.4E-40 T 11-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SHALO_RS12375 5c438747c06cfc363effd73ee5c4a219 276 PRINTS PR00996 Glutamate methyltransferase family signature 142 158 2.4E-40 T 11-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SHALO_RS12375 5c438747c06cfc363effd73ee5c4a219 276 PRINTS PR00996 Glutamate methyltransferase family signature 70 82 2.4E-40 T 11-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SHALO_RS12375 5c438747c06cfc363effd73ee5c4a219 276 PRINTS PR00996 Glutamate methyltransferase family signature 216 230 2.4E-40 T 11-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SHALO_RS12375 5c438747c06cfc363effd73ee5c4a219 276 Pfam PF01739 CheR methyltransferase, SAM binding domain 77 270 8.8E-58 T 11-11-2016 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal SHALO_RS12375 5c438747c06cfc363effd73ee5c4a219 276 Gene3D G3DSA:3.40.50.150 76 274 7.5E-62 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS12375 5c438747c06cfc363effd73ee5c4a219 276 PIRSF PIRSF000410 1 276 2.7E-92 T 11-11-2016 IPR026024 Chemotaxis protein methyltransferase CheR SHALO_RS12375 5c438747c06cfc363effd73ee5c4a219 276 SUPERFAMILY SSF47757 5 76 8.76E-16 T 11-11-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal SHALO_RS12375 5c438747c06cfc363effd73ee5c4a219 276 SMART SM00138 9 276 8.7E-87 T 11-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SHALO_RS12375 5c438747c06cfc363effd73ee5c4a219 276 Gene3D G3DSA:1.10.155.10 3 71 3.9E-20 T 11-11-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal SHALO_RS08370 cdb9ad8344a60b3195c5cf660a8126a8 761 SUPERFAMILY SSF55073 344 496 4.39E-42 T 11-11-2016 IPR029787 Nucleotide cyclase SHALO_RS08370 cdb9ad8344a60b3195c5cf660a8126a8 761 Gene3D G3DSA:3.30.70.270 341 502 8.6E-48 T 11-11-2016 SHALO_RS08370 cdb9ad8344a60b3195c5cf660a8126a8 761 Gene3D G3DSA:3.30.450.20 85 180 1.0E-4 T 11-11-2016 SHALO_RS08370 cdb9ad8344a60b3195c5cf660a8126a8 761 SMART SM00267 329 495 3.0E-48 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS08370 cdb9ad8344a60b3195c5cf660a8126a8 761 SMART SM00052 505 750 8.6E-99 T 11-11-2016 IPR001633 EAL domain SHALO_RS08370 cdb9ad8344a60b3195c5cf660a8126a8 761 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 337 493 3.2E-38 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS08370 cdb9ad8344a60b3195c5cf660a8126a8 761 SUPERFAMILY SSF141868 512 756 4.97E-78 T 11-11-2016 IPR001633 EAL domain SHALO_RS08370 cdb9ad8344a60b3195c5cf660a8126a8 761 Gene3D G3DSA:3.20.20.450 509 757 1.8E-82 T 11-11-2016 IPR001633 EAL domain SHALO_RS08370 cdb9ad8344a60b3195c5cf660a8126a8 761 Pfam PF02743 Cache domain 34 266 7.9E-12 T 11-11-2016 IPR033479 Double Cache domain 1 SHALO_RS08370 cdb9ad8344a60b3195c5cf660a8126a8 761 Pfam PF00990 Diguanylate cyclase, GGDEF domain 339 491 5.7E-42 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS08370 cdb9ad8344a60b3195c5cf660a8126a8 761 Pfam PF00563 EAL domain 512 745 8.6E-67 T 11-11-2016 IPR001633 EAL domain SHALO_RS10040 4d919dd6107ef355ffa7a20c7b1b237f 171 Pfam PF04390 Lipopolysaccharide-assembly 8 160 8.3E-11 T 11-11-2016 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 SHALO_RS01465 01d1050cff43e1f545f89d249ce9c9fe 294 SUPERFAMILY SSF54211 2 120 2.88E-36 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SHALO_RS01465 01d1050cff43e1f545f89d249ce9c9fe 294 SUPERFAMILY SSF54211 130 273 6.83E-48 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SHALO_RS01465 01d1050cff43e1f545f89d249ce9c9fe 294 Gene3D G3DSA:3.30.1700.10 126 277 1.8E-56 T 11-11-2016 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 SHALO_RS01465 01d1050cff43e1f545f89d249ce9c9fe 294 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 1 274 43.174 T 11-11-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 SHALO_RS01465 01d1050cff43e1f545f89d249ce9c9fe 294 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 3 270 2.1E-99 T 11-11-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 SHALO_RS01465 01d1050cff43e1f545f89d249ce9c9fe 294 Gene3D G3DSA:3.30.230.20 2 121 4.2E-39 T 11-11-2016 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 SHALO_RS01465 01d1050cff43e1f545f89d249ce9c9fe 294 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 1 290 1.5E-109 T 11-11-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 SHALO_RS14805 4a12eb9ba10e0a1f00a88e1f3827199a 356 SUPERFAMILY SSF55347 113 238 4.58E-43 T 11-11-2016 SHALO_RS14805 4a12eb9ba10e0a1f00a88e1f3827199a 356 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1 353 9.9E-109 T 11-11-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 SHALO_RS14805 4a12eb9ba10e0a1f00a88e1f3827199a 356 PIRSF PIRSF006205 1 356 5.5E-110 T 11-11-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 SHALO_RS14805 4a12eb9ba10e0a1f00a88e1f3827199a 356 SUPERFAMILY SSF69055 267 355 2.22E-15 T 11-11-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 SHALO_RS14805 4a12eb9ba10e0a1f00a88e1f3827199a 356 Gene3D G3DSA:1.10.1740.10 279 353 2.2E-11 T 11-11-2016 SHALO_RS14805 4a12eb9ba10e0a1f00a88e1f3827199a 356 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 1 356 38.541 T 11-11-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 SHALO_RS14805 4a12eb9ba10e0a1f00a88e1f3827199a 356 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 127 207 3.1E-31 T 11-11-2016 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 SHALO_RS14805 4a12eb9ba10e0a1f00a88e1f3827199a 356 Pfam PF13288 DXP reductoisomerase C-terminal domain 237 351 2.5E-21 T 11-11-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 SHALO_RS14805 4a12eb9ba10e0a1f00a88e1f3827199a 356 Gene3D G3DSA:3.40.50.720 1 123 8.0E-38 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS14805 4a12eb9ba10e0a1f00a88e1f3827199a 356 SUPERFAMILY SSF51735 1 123 6.82E-26 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS14805 4a12eb9ba10e0a1f00a88e1f3827199a 356 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1 119 1.2E-32 T 11-11-2016 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 SHALO_RS13640 edae5a154fe2b519a46f20e41acefcce 392 Gene3D G3DSA:3.30.300.30 299 387 2.6E-8 T 11-11-2016 SHALO_RS13640 edae5a154fe2b519a46f20e41acefcce 392 SUPERFAMILY SSF56801 50 388 1.83E-36 T 11-11-2016 SHALO_RS13640 edae5a154fe2b519a46f20e41acefcce 392 Gene3D G3DSA:3.40.50.980 80 232 5.1E-17 T 11-11-2016 SHALO_RS13640 edae5a154fe2b519a46f20e41acefcce 392 Pfam PF00501 AMP-binding enzyme 35 303 4.4E-21 T 11-11-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 SHALO_RS13405 01f3105730b1e1c442b6afe29c17db97 593 SUPERFAMILY SSF102114 38 259 2.94E-24 T 11-11-2016 SHALO_RS13405 01f3105730b1e1c442b6afe29c17db97 593 Gene3D G3DSA:3.20.20.70 49 243 8.6E-23 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_RS13405 01f3105730b1e1c442b6afe29c17db97 593 SUPERFAMILY SSF53807 375 573 2.39E-30 T 11-11-2016 SHALO_RS13405 01f3105730b1e1c442b6afe29c17db97 593 Pfam PF04055 Radical SAM superfamily 64 218 1.8E-13 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SHALO_RS13405 01f3105730b1e1c442b6afe29c17db97 593 Gene3D G3DSA:3.40.50.1980 402 553 1.8E-17 T 11-11-2016 SHALO_RS13405 01f3105730b1e1c442b6afe29c17db97 593 Pfam PF01497 Periplasmic binding protein 384 494 3.3E-7 T 11-11-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 SHALO_RS09025 67587c5afa1f8665030d7158c8f1dc80 273 SUPERFAMILY SSF53335 7 223 8.06E-46 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS09025 67587c5afa1f8665030d7158c8f1dc80 273 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 24 265 2.6E-62 T 11-11-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 SHALO_RS09025 67587c5afa1f8665030d7158c8f1dc80 273 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 181 187 - T 11-11-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 SHALO_RS09025 67587c5afa1f8665030d7158c8f1dc80 273 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 16 270 7.2E-63 T 11-11-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 SHALO_RS09025 67587c5afa1f8665030d7158c8f1dc80 273 Pfam PF05175 Methyltransferase small domain 104 190 7.0E-16 T 11-11-2016 IPR007848 Methyltransferase small domain GO:0008168 SHALO_RS09025 67587c5afa1f8665030d7158c8f1dc80 273 Gene3D G3DSA:1.10.8.10 3 83 8.4E-18 T 11-11-2016 SHALO_RS09025 67587c5afa1f8665030d7158c8f1dc80 273 Gene3D G3DSA:3.40.50.150 85 267 1.3E-44 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS13825 211a47dac03a35cedfb07a2126456afd 565 TIGRFAM TIGR00680 kdpA: K+-transporting ATPase, A subunit 7 558 1.4E-219 T 11-11-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 SHALO_RS13825 211a47dac03a35cedfb07a2126456afd 565 Pfam PF03814 Potassium-transporting ATPase A subunit 11 557 2.9E-232 T 11-11-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 SHALO_RS13825 211a47dac03a35cedfb07a2126456afd 565 PIRSF PIRSF001294 1 561 1.3E-232 T 11-11-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 SHALO_RS13825 211a47dac03a35cedfb07a2126456afd 565 Hamap MF_00275 Potassium-transporting ATPase potassium-binding subunit [kdpA]. 1 559 33.818 T 11-11-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 SHALO_RS10215 421861629c2ac609e038f56c5c64e16b 76 SUPERFAMILY SSF54565 3 74 5.76E-27 T 11-11-2016 IPR023803 Ribosomal protein S16 domain Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS10215 421861629c2ac609e038f56c5c64e16b 76 Gene3D G3DSA:3.30.1320.10 4 74 4.2E-28 T 11-11-2016 IPR023803 Ribosomal protein S16 domain Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS10215 421861629c2ac609e038f56c5c64e16b 76 Pfam PF00886 Ribosomal protein S16 9 67 2.2E-23 T 11-11-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS10215 421861629c2ac609e038f56c5c64e16b 76 TIGRFAM TIGR00002 S16: ribosomal protein bS16 5 73 2.9E-27 T 11-11-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS10215 421861629c2ac609e038f56c5c64e16b 76 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 2 76 19.885 T 11-11-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS10215 421861629c2ac609e038f56c5c64e16b 76 ProSitePatterns PS00732 Ribosomal protein S16 signature. 3 12 - T 11-11-2016 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_RS10355 4f117d84445c3f0b475616eebb2c6a43 228 SUPERFAMILY SSF51735 2 222 1.52E-55 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS10355 4f117d84445c3f0b475616eebb2c6a43 228 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 116 124 1.8E-9 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_RS10355 4f117d84445c3f0b475616eebb2c6a43 228 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 66 77 1.8E-9 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_RS10355 4f117d84445c3f0b475616eebb2c6a43 228 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 155 1.8E-9 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_RS10355 4f117d84445c3f0b475616eebb2c6a43 228 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 6.9E-33 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_RS10355 4f117d84445c3f0b475616eebb2c6a43 228 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 185 205 6.9E-33 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_RS10355 4f117d84445c3f0b475616eebb2c6a43 228 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 66 77 6.9E-33 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_RS10355 4f117d84445c3f0b475616eebb2c6a43 228 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 173 6.9E-33 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_RS10355 4f117d84445c3f0b475616eebb2c6a43 228 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 136 155 6.9E-33 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_RS10355 4f117d84445c3f0b475616eebb2c6a43 228 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 110 126 6.9E-33 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_RS10355 4f117d84445c3f0b475616eebb2c6a43 228 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 8 222 4.1E-46 T 11-11-2016 SHALO_RS10355 4f117d84445c3f0b475616eebb2c6a43 228 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 123 151 - T 11-11-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 SHALO_RS10355 4f117d84445c3f0b475616eebb2c6a43 228 Gene3D G3DSA:3.40.50.720 3 222 6.7E-57 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS02600 df3535a3cf5b4bece676528a37202749 555 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 171 555 2.4E-140 T 11-11-2016 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS02600 df3535a3cf5b4bece676528a37202749 555 SUPERFAMILY SSF143243 11 185 1.01E-41 T 11-11-2016 SHALO_RS02600 df3535a3cf5b4bece676528a37202749 555 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 23 142 9.5E-32 T 11-11-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS02600 df3535a3cf5b4bece676528a37202749 555 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 153 555 43.006 T 11-11-2016 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS02600 df3535a3cf5b4bece676528a37202749 555 Hamap MF_01397 NADH-quinone oxidoreductase subunit C/D [nuoC]. 17 555 46.774 T 11-11-2016 IPR026662 NADH-quinone oxidoreductase subunit CD GO:0030964|GO:0050136|GO:0055114 KEGG: 00190+1.6.5.11 SHALO_RS02600 df3535a3cf5b4bece676528a37202749 555 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 285 555 2.2E-103 T 11-11-2016 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS02600 df3535a3cf5b4bece676528a37202749 555 Gene3D G3DSA:1.10.645.10 167 549 5.7E-49 T 11-11-2016 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS02600 df3535a3cf5b4bece676528a37202749 555 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 77 138 1.0E-12 T 11-11-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS02600 df3535a3cf5b4bece676528a37202749 555 SUPERFAMILY SSF56762 181 555 1.7E-115 T 11-11-2016 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS02650 df030ff170fec0df0e37ba52cf4fa294 198 PIRSF PIRSF000349 1 198 4.2E-82 T 11-11-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 SHALO_RS02650 df030ff170fec0df0e37ba52cf4fa294 198 SUPERFAMILY SSF46609 1 87 2.23E-35 T 11-11-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 SHALO_RS02650 df030ff170fec0df0e37ba52cf4fa294 198 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 161 168 - T 11-11-2016 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 SHALO_RS02650 df030ff170fec0df0e37ba52cf4fa294 198 SUPERFAMILY SSF54719 89 197 7.86E-43 T 11-11-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 SHALO_RS02650 df030ff170fec0df0e37ba52cf4fa294 198 Gene3D G3DSA:1.10.287.990 20 87 3.1E-24 T 11-11-2016 SHALO_RS02650 df030ff170fec0df0e37ba52cf4fa294 198 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 4 87 4.4E-32 T 11-11-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 SHALO_RS02650 df030ff170fec0df0e37ba52cf4fa294 198 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 94 194 1.2E-38 T 11-11-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 SHALO_RS02650 df030ff170fec0df0e37ba52cf4fa294 198 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 6.6E-24 T 11-11-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 SHALO_RS02650 df030ff170fec0df0e37ba52cf4fa294 198 PRINTS PR01703 Manganese superoxide dismutase signature 159 171 6.6E-24 T 11-11-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 SHALO_RS02650 df030ff170fec0df0e37ba52cf4fa294 198 PRINTS PR01703 Manganese superoxide dismutase signature 70 83 6.6E-24 T 11-11-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 SHALO_RS02650 df030ff170fec0df0e37ba52cf4fa294 198 PRINTS PR01703 Manganese superoxide dismutase signature 123 131 6.6E-24 T 11-11-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 SHALO_RS02650 df030ff170fec0df0e37ba52cf4fa294 198 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 6.6E-24 T 11-11-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 SHALO_RS09610 d29d8933eeeaa8c672d74e09164dc5e8 537 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 336 534 5.0E-38 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SHALO_RS09610 d29d8933eeeaa8c672d74e09164dc5e8 537 SMART SM00283 273 535 8.2E-43 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SHALO_RS09610 d29d8933eeeaa8c672d74e09164dc5e8 537 Gene3D G3DSA:1.10.287.950 292 482 1.3E-43 T 11-11-2016 SHALO_RS09610 d29d8933eeeaa8c672d74e09164dc5e8 537 SUPERFAMILY SSF58104 226 536 2.96E-56 T 11-11-2016 SHALO_RS00185 33600e88488278f46acd7e1e14cd7ba0 310 Gene3D G3DSA:3.40.50.720 2 113 1.1E-28 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS00185 33600e88488278f46acd7e1e14cd7ba0 310 SUPERFAMILY SSF52283 1 131 5.29E-27 T 11-11-2016 SHALO_RS00185 33600e88488278f46acd7e1e14cd7ba0 310 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 13 309 1.1E-21 T 11-11-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 SHALO_RS00185 33600e88488278f46acd7e1e14cd7ba0 310 Gene3D G3DSA:3.40.50.720 114 288 2.4E-49 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS00185 33600e88488278f46acd7e1e14cd7ba0 310 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 106 286 9.1E-48 T 11-11-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 SHALO_RS00185 33600e88488278f46acd7e1e14cd7ba0 310 SUPERFAMILY SSF51735 98 287 1.6E-44 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS03740 42b6afb441059d2a20bed795f6d7a8dd 245 Pfam PF05036 Sporulation related domain 170 242 3.1E-8 T 11-11-2016 IPR007730 Sporulation-related domain GO:0042834 SHALO_RS03740 42b6afb441059d2a20bed795f6d7a8dd 245 SUPERFAMILY SSF110997 169 241 1.96E-7 T 11-11-2016 IPR007730 Sporulation-related domain GO:0042834 SHALO_RS03740 42b6afb441059d2a20bed795f6d7a8dd 245 Gene3D G3DSA:3.30.70.1070 168 243 7.9E-9 T 11-11-2016 IPR007730 Sporulation-related domain GO:0042834 SHALO_RS06085 2a4c6e195c12a537f66cd3b0393bc741 482 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 276 287 - T 11-11-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 SHALO_RS06085 2a4c6e195c12a537f66cd3b0393bc741 482 SUPERFAMILY SSF53720 4 477 1.26E-160 T 11-11-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 SHALO_RS06085 2a4c6e195c12a537f66cd3b0393bc741 482 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 248 255 - T 11-11-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 SHALO_RS06085 2a4c6e195c12a537f66cd3b0393bc741 482 Gene3D G3DSA:3.40.309.10 262 440 1.2E-65 T 11-11-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 SHALO_RS06085 2a4c6e195c12a537f66cd3b0393bc741 482 Gene3D G3DSA:3.40.605.10 6 261 1.6E-92 T 11-11-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 SHALO_RS06085 2a4c6e195c12a537f66cd3b0393bc741 482 Pfam PF00171 Aldehyde dehydrogenase family 18 473 1.5E-164 T 11-11-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 SHALO_RS03095 4d3935073172408f8ea1cb0edb8052c9 511 Pfam PF07690 Major Facilitator Superfamily 24 416 2.0E-57 T 11-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SHALO_RS03095 4d3935073172408f8ea1cb0edb8052c9 511 Gene3D G3DSA:1.20.1250.20 479 505 3.4E-20 T 11-11-2016 SHALO_RS03095 4d3935073172408f8ea1cb0edb8052c9 511 Gene3D G3DSA:1.20.1250.20 265 447 3.4E-20 T 11-11-2016 SHALO_RS03095 4d3935073172408f8ea1cb0edb8052c9 511 Gene3D G3DSA:1.20.1250.20 21 196 7.6E-33 T 11-11-2016 SHALO_RS03095 4d3935073172408f8ea1cb0edb8052c9 511 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 17 495 2.1E-133 T 11-11-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 SHALO_RS03095 4d3935073172408f8ea1cb0edb8052c9 511 SUPERFAMILY SSF103473 474 502 1.7E-67 T 11-11-2016 IPR020846 Major facilitator superfamily domain SHALO_RS03095 4d3935073172408f8ea1cb0edb8052c9 511 SUPERFAMILY SSF103473 10 200 1.7E-67 T 11-11-2016 IPR020846 Major facilitator superfamily domain SHALO_RS03095 4d3935073172408f8ea1cb0edb8052c9 511 SUPERFAMILY SSF103473 255 426 1.7E-67 T 11-11-2016 IPR020846 Major facilitator superfamily domain SHALO_RS03095 4d3935073172408f8ea1cb0edb8052c9 511 PRINTS PR01036 Tetracycline resistance protein TetB signature 22 46 2.7E-6 T 11-11-2016 SHALO_RS03095 4d3935073172408f8ea1cb0edb8052c9 511 PRINTS PR01036 Tetracycline resistance protein TetB signature 143 167 2.7E-6 T 11-11-2016 SHALO_RS03095 4d3935073172408f8ea1cb0edb8052c9 511 PRINTS PR01036 Tetracycline resistance protein TetB signature 209 227 2.7E-6 T 11-11-2016 SHALO_RS01670 799d0f41bb7f8e6b52fb031947ef5426 211 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 9 210 36.381 T 11-11-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 SHALO_RS01670 799d0f41bb7f8e6b52fb031947ef5426 211 SUPERFAMILY SSF55821 11 208 4.58E-72 T 11-11-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain SHALO_RS01670 799d0f41bb7f8e6b52fb031947ef5426 211 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 16 205 1.7E-73 T 11-11-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 SHALO_RS01670 799d0f41bb7f8e6b52fb031947ef5426 211 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 12 206 2.9E-68 T 11-11-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 SHALO_RS01670 799d0f41bb7f8e6b52fb031947ef5426 211 Gene3D G3DSA:3.90.870.10 12 209 5.0E-81 T 11-11-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain SHALO_RS04950 a74443a5e515adcac60550d7c5e01630 438 Gene3D G3DSA:3.20.20.70 10 395 1.9E-127 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_RS04950 a74443a5e515adcac60550d7c5e01630 438 Pfam PF00682 HMGL-like 32 309 2.3E-70 T 11-11-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 SHALO_RS04950 a74443a5e515adcac60550d7c5e01630 438 SUPERFAMILY SSF51569 22 328 9.89E-87 T 11-11-2016 SHALO_RS04950 a74443a5e515adcac60550d7c5e01630 438 SUPERFAMILY SSF89000 388 434 3.92E-8 T 11-11-2016 SHALO_RS04950 a74443a5e515adcac60550d7c5e01630 438 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 241 254 - T 11-11-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 SHALO_RS04950 a74443a5e515adcac60550d7c5e01630 438 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 39 55 - T 11-11-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 SHALO_RS13860 23c2b010d5913fe564c10e467a98d9a4 196 Gene3D G3DSA:3.90.950.10 2 193 1.9E-59 T 11-11-2016 IPR029001 Inosine triphosphate pyrophosphatase-like SHALO_RS13860 23c2b010d5913fe564c10e467a98d9a4 196 SUPERFAMILY SSF52972 2 193 5.76E-55 T 11-11-2016 IPR029001 Inosine triphosphate pyrophosphatase-like SHALO_RS13860 23c2b010d5913fe564c10e467a98d9a4 196 Pfam PF01725 Ham1 family 3 186 1.3E-45 T 11-11-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206|Reactome: R-HSA-15869 SHALO_RS13860 23c2b010d5913fe564c10e467a98d9a4 196 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 3 186 5.6E-44 T 11-11-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206|Reactome: R-HSA-15869 SHALO_RS13860 23c2b010d5913fe564c10e467a98d9a4 196 Hamap MF_01405 dITP/XTP pyrophosphatase [rdgB]. 1 194 43.045 T 11-11-2016 IPR020922 Non-canonical purine NTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 SHALO_RS08635 ca3d9734c1a98f86c84d679a41ebbec6 92 Gene3D G3DSA:1.10.287.10 5 89 3.7E-35 T 11-11-2016 IPR009068 S15/NS1, RNA-binding SHALO_RS08635 ca3d9734c1a98f86c84d679a41ebbec6 92 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 11 88 1.0E-26 T 11-11-2016 SHALO_RS08635 ca3d9734c1a98f86c84d679a41ebbec6 92 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 20.838 T 11-11-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS08635 ca3d9734c1a98f86c84d679a41ebbec6 92 Pfam PF00312 Ribosomal protein S15 8 88 1.6E-34 T 11-11-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_RS08635 ca3d9734c1a98f86c84d679a41ebbec6 92 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 11-11-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_RS08635 ca3d9734c1a98f86c84d679a41ebbec6 92 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 6 88 6.1E-35 T 11-11-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS08635 ca3d9734c1a98f86c84d679a41ebbec6 92 SUPERFAMILY SSF47060 4 89 6.18E-32 T 11-11-2016 IPR009068 S15/NS1, RNA-binding SHALO_RS08635 ca3d9734c1a98f86c84d679a41ebbec6 92 SMART SM01387 8 88 8.1E-47 T 11-11-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_RS13730 a9fb0a18a8b0b965c24828b6126969b3 119 SMART SM00448 1 114 3.2E-31 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS13730 a9fb0a18a8b0b965c24828b6126969b3 119 Pfam PF00072 Response regulator receiver domain 4 114 4.4E-29 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS13730 a9fb0a18a8b0b965c24828b6126969b3 119 Gene3D G3DSA:3.40.50.2300 1 118 8.1E-38 T 11-11-2016 SHALO_RS13730 a9fb0a18a8b0b965c24828b6126969b3 119 SUPERFAMILY SSF52172 2 118 5.27E-36 T 11-11-2016 IPR011006 CheY-like superfamily SHALO_RS12650 954fbf26ed068785f56b5a5b6afda828 782 SUPERFAMILY SSF56935 102 782 1.22E-113 T 11-11-2016 SHALO_RS12650 954fbf26ed068785f56b5a5b6afda828 782 Gene3D G3DSA:2.170.130.10 120 243 4.6E-31 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SHALO_RS12650 954fbf26ed068785f56b5a5b6afda828 782 Pfam PF00593 TonB dependent receptor 546 781 8.9E-27 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SHALO_RS12650 954fbf26ed068785f56b5a5b6afda828 782 Pfam PF07715 TonB-dependent Receptor Plug Domain 140 235 4.4E-13 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SHALO_RS12650 954fbf26ed068785f56b5a5b6afda828 782 Pfam PF07660 Secretin and TonB N terminus short domain 51 100 5.5E-13 T 11-11-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 SHALO_RS12650 954fbf26ed068785f56b5a5b6afda828 782 Gene3D G3DSA:2.40.170.20 252 782 3.0E-121 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SHALO_RS12650 954fbf26ed068785f56b5a5b6afda828 782 SMART SM00965 50 100 3.0E-11 T 11-11-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 SHALO_RS12650 954fbf26ed068785f56b5a5b6afda828 782 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 142 782 2.5E-101 T 11-11-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 SHALO_RS12650 954fbf26ed068785f56b5a5b6afda828 782 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 765 782 - T 11-11-2016 IPR010917 TonB-dependent receptor, conserved site SHALO_RS13000 b339f2d75aeaf6ee1eb125c6dd2b6bcd 713 SUPERFAMILY SSF52540 477 707 1.78E-64 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS13000 b339f2d75aeaf6ee1eb125c6dd2b6bcd 713 Gene3D G3DSA:1.20.1560.10 157 462 1.5E-35 T 11-11-2016 SHALO_RS13000 b339f2d75aeaf6ee1eb125c6dd2b6bcd 713 Pfam PF00664 ABC transporter transmembrane region 173 427 4.4E-11 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SHALO_RS13000 b339f2d75aeaf6ee1eb125c6dd2b6bcd 713 SMART SM00382 509 694 1.8E-14 T 11-11-2016 IPR003593 AAA+ ATPase domain SHALO_RS13000 b339f2d75aeaf6ee1eb125c6dd2b6bcd 713 Pfam PF00005 ABC transporter 500 647 3.4E-31 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_RS13000 b339f2d75aeaf6ee1eb125c6dd2b6bcd 713 Pfam PF03412 Peptidase C39 family 20 140 3.4E-9 T 11-11-2016 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 SHALO_RS13000 b339f2d75aeaf6ee1eb125c6dd2b6bcd 713 Gene3D G3DSA:3.90.70.10 22 140 7.9E-12 T 11-11-2016 SHALO_RS13000 b339f2d75aeaf6ee1eb125c6dd2b6bcd 713 SUPERFAMILY SSF90123 153 467 3.92E-40 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SHALO_RS13000 b339f2d75aeaf6ee1eb125c6dd2b6bcd 713 Gene3D G3DSA:3.40.50.300 483 707 2.7E-64 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS04830 14d5595586fb212269e5d2e3a616d0f0 725 Gene3D G3DSA:2.40.170.20 201 725 4.7E-122 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SHALO_RS04830 14d5595586fb212269e5d2e3a616d0f0 725 Gene3D G3DSA:2.170.130.10 68 192 8.4E-29 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SHALO_RS04830 14d5595586fb212269e5d2e3a616d0f0 725 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 708 725 - T 11-11-2016 IPR010917 TonB-dependent receptor, conserved site SHALO_RS04830 14d5595586fb212269e5d2e3a616d0f0 725 Pfam PF00593 TonB dependent receptor 496 724 4.1E-28 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SHALO_RS04830 14d5595586fb212269e5d2e3a616d0f0 725 Pfam PF07715 TonB-dependent Receptor Plug Domain 87 183 1.3E-14 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SHALO_RS04830 14d5595586fb212269e5d2e3a616d0f0 725 SUPERFAMILY SSF56935 48 725 1.31E-113 T 11-11-2016 SHALO_RS04830 14d5595586fb212269e5d2e3a616d0f0 725 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 89 725 1.6E-94 T 11-11-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 SHALO_RS14020 7b95a06419bd5f31159e056f1ae11422 241 SUPERFAMILY SSF89155 6 219 2.35E-41 T 11-11-2016 IPR020945 DMSO/Nitrate reductase chaperone SHALO_RS14020 7b95a06419bd5f31159e056f1ae11422 241 Gene3D G3DSA:1.10.3480.10 11 35 2.1E-47 T 11-11-2016 IPR020945 DMSO/Nitrate reductase chaperone SHALO_RS14020 7b95a06419bd5f31159e056f1ae11422 241 Gene3D G3DSA:1.10.3480.10 70 219 2.1E-47 T 11-11-2016 IPR020945 DMSO/Nitrate reductase chaperone SHALO_RS14020 7b95a06419bd5f31159e056f1ae11422 241 Pfam PF02613 Nitrate reductase delta subunit 53 188 1.3E-32 T 11-11-2016 IPR020945 DMSO/Nitrate reductase chaperone SHALO_RS12415 97f6828b50dd813baa8ffbce3ff7b082 144 SUPERFAMILY SSF50800 16 144 2.35E-17 T 11-11-2016 IPR011037 Pyruvate kinase-like, insert domain SHALO_RS12415 97f6828b50dd813baa8ffbce3ff7b082 144 Gene3D G3DSA:2.40.33.20 18 143 1.4E-12 T 11-11-2016 IPR015808 Molybdenum cofactor sulfurase, C-terminal-like SHALO_RS09755 26905d85bf7424a97df5c9f72a1d625d 484 Gene3D G3DSA:3.30.1330.120 291 427 3.2E-52 T 11-11-2016 SHALO_RS09755 26905d85bf7424a97df5c9f72a1d625d 484 Pfam PF03972 MmgE/PrpD family 20 466 3.7E-146 T 11-11-2016 IPR005656 MmgE/PrpD GO:0016829 SHALO_RS09755 26905d85bf7424a97df5c9f72a1d625d 484 TIGRFAM TIGR02330 prpD: 2-methylcitrate dehydratase 16 484 6.3E-264 T 11-11-2016 IPR012705 2-methylcitrate dehydratase PrpD GO:0019629|GO:0047547|GO:0051537 KEGG: 00640+4.2.1.79 SHALO_RS09755 26905d85bf7424a97df5c9f72a1d625d 484 SUPERFAMILY SSF103378 15 482 1.2E-147 T 11-11-2016 IPR005656 MmgE/PrpD GO:0016829 SHALO_RS09290 67e44908b856c5b35e2517e434ebc024 344 Pfam PF02625 XdhC and CoxI family 13 75 3.2E-16 T 11-11-2016 IPR003777 XdhC- CoxI SHALO_RS09290 67e44908b856c5b35e2517e434ebc024 344 Pfam PF13478 XdhC Rossmann domain 196 338 1.3E-39 T 11-11-2016 IPR027051 XdhC Rossmann domain SHALO_RS04365 99854c1c2076f51a4c44a705276eea12 165 Gene3D G3DSA:3.40.50.1000 1 161 8.0E-40 T 11-11-2016 IPR023214 HAD-like domain SHALO_RS04365 99854c1c2076f51a4c44a705276eea12 165 SUPERFAMILY SSF56784 1 151 8.14E-35 T 11-11-2016 IPR023214 HAD-like domain SHALO_RS04365 99854c1c2076f51a4c44a705276eea12 165 Pfam PF08282 haloacid dehalogenase-like hydrolase 77 136 3.4E-9 T 11-11-2016 IPR023214 HAD-like domain SHALO_RS04365 99854c1c2076f51a4c44a705276eea12 165 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 2 155 3.9E-56 T 11-11-2016 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 SHALO_RS04365 99854c1c2076f51a4c44a705276eea12 165 PIRSF PIRSF006118 1 165 4.4E-62 T 11-11-2016 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 SHALO_RS11435 f009454bd95af552eff464a23f433da8 397 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 89 112 - T 11-11-2016 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 SHALO_RS11435 f009454bd95af552eff464a23f433da8 397 SUPERFAMILY SSF53623 87 215 4.19E-28 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 SHALO_RS11435 f009454bd95af552eff464a23f433da8 397 SUPERFAMILY SSF53244 262 395 1.6E-30 T 11-11-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 SHALO_RS11435 f009454bd95af552eff464a23f433da8 397 Gene3D G3DSA:3.40.1190.10 86 212 1.9E-32 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 SHALO_RS11435 f009454bd95af552eff464a23f433da8 397 Pfam PF08245 Mur ligase middle domain 91 196 2.8E-16 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 SHALO_RS11435 f009454bd95af552eff464a23f433da8 397 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 2 395 2.3E-99 T 11-11-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 SHALO_RS11435 f009454bd95af552eff464a23f433da8 397 Gene3D G3DSA:3.90.190.20 261 394 1.7E-40 T 11-11-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 SHALO_RS15090 a09c1e5c56f466767cced0a707774dcc 111 Pfam PF03840 Preprotein translocase SecG subunit 4 70 2.4E-15 T 11-11-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 SHALO_RS15090 a09c1e5c56f466767cced0a707774dcc 111 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 71 1.2E-17 T 11-11-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 SHALO_RS08860 7a415cf9b8d5b5233de55a300e05829d 237 Gene3D G3DSA:3.30.470.20 94 221 1.1E-49 T 11-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SHALO_RS08860 7a415cf9b8d5b5233de55a300e05829d 237 Gene3D G3DSA:3.30.200.20 6 93 3.5E-35 T 11-11-2016 SHALO_RS08860 7a415cf9b8d5b5233de55a300e05829d 237 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 5 236 7.0E-73 T 11-11-2016 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 SHALO_RS08860 7a415cf9b8d5b5233de55a300e05829d 237 SUPERFAMILY SSF56104 3 235 1.93E-77 T 11-11-2016 SHALO_RS08860 7a415cf9b8d5b5233de55a300e05829d 237 Pfam PF01259 SAICAR synthetase 6 233 7.3E-62 T 11-11-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 SHALO_RS08860 7a415cf9b8d5b5233de55a300e05829d 237 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 4 236 30.762 T 11-11-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 SHALO_RS08860 7a415cf9b8d5b5233de55a300e05829d 237 ProSitePatterns PS01057 SAICAR synthetase signature 1. 86 100 - T 11-11-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 SHALO_RS14350 140ffda07bd46fd8534c362305650976 406 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 5 405 6.2E-105 T 11-11-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 SHALO_RS14350 140ffda07bd46fd8534c362305650976 406 PIRSF PIRSF001434 1 406 6.0E-112 T 11-11-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 SHALO_RS14350 140ffda07bd46fd8534c362305650976 406 SUPERFAMILY SSF53383 1 406 7.26E-95 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase SHALO_RS14350 140ffda07bd46fd8534c362305650976 406 Gene3D G3DSA:3.40.640.10 2 272 1.4E-81 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SHALO_RS14350 140ffda07bd46fd8534c362305650976 406 Gene3D G3DSA:3.90.1150.10 273 406 5.6E-37 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SHALO_RS00780 1dafde18b05cd10b6ec0dc0371525a61 530 SUPERFAMILY SSF109604 333 519 2.63E-37 T 11-11-2016 SHALO_RS00780 1dafde18b05cd10b6ec0dc0371525a61 530 Gene3D G3DSA:1.10.3210.10 339 482 7.1E-20 T 11-11-2016 IPR006674 HD domain SHALO_RS00780 1dafde18b05cd10b6ec0dc0371525a61 530 SMART SM00471 351 488 2.3E-7 T 11-11-2016 IPR003607 HD/PDEase domain SHALO_RS00780 1dafde18b05cd10b6ec0dc0371525a61 530 Pfam PF01966 HD domain 356 478 3.2E-18 T 11-11-2016 IPR006674 HD domain SHALO_RS09365 fca13b6f73926488f203149d468655d9 90 Pfam PF02583 Metal-sensitive transcriptional repressor 7 86 2.3E-21 T 11-11-2016 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 SHALO_RS08315 5e115bd185790a3593f1e4e4653e2a5a 332 Pfam PF00296 Luciferase-like monooxygenase 25 305 2.0E-35 T 11-11-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 SHALO_RS08315 5e115bd185790a3593f1e4e4653e2a5a 332 SUPERFAMILY SSF51679 6 327 6.15E-79 T 11-11-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 SHALO_RS08315 5e115bd185790a3593f1e4e4653e2a5a 332 Gene3D G3DSA:3.20.20.30 7 328 5.2E-85 T 11-11-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 SHALO_RS08315 5e115bd185790a3593f1e4e4653e2a5a 332 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 8 328 1.3E-128 T 11-11-2016 IPR019949 Luciferase family oxidoreductase, group 1 SHALO_RS04930 0063bc17a7624b5aad1c17954261a750 273 Gene3D G3DSA:3.40.630.30 202 265 1.4E-9 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase SHALO_RS04930 0063bc17a7624b5aad1c17954261a750 273 SUPERFAMILY SSF55729 177 268 8.95E-13 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase SHALO_RS04930 0063bc17a7624b5aad1c17954261a750 273 Pfam PF12746 GNAT acetyltransferase 28 264 1.5E-30 T 11-11-2016 IPR027365 GNAT acetyltransferase YdfB-like SHALO_RS08980 28c7c80ed04773ae06d84eb4f57799c4 790 Gene3D G3DSA:3.30.450.20 88 213 2.1E-20 T 11-11-2016 SHALO_RS08980 28c7c80ed04773ae06d84eb4f57799c4 790 Pfam PF01966 HD domain 424 499 2.1E-4 T 11-11-2016 IPR006674 HD domain SHALO_RS08980 28c7c80ed04773ae06d84eb4f57799c4 790 Gene3D G3DSA:1.10.3210.10 406 487 7.5E-9 T 11-11-2016 IPR006674 HD domain SHALO_RS08980 28c7c80ed04773ae06d84eb4f57799c4 790 Gene3D G3DSA:1.10.3210.10 652 741 2.4E-4 T 11-11-2016 IPR006674 HD domain SHALO_RS08980 28c7c80ed04773ae06d84eb4f57799c4 790 SMART SM00471 418 732 1.2E-7 T 11-11-2016 IPR003607 HD/PDEase domain SHALO_RS08980 28c7c80ed04773ae06d84eb4f57799c4 790 SUPERFAMILY SSF109604 648 761 3.77E-10 T 11-11-2016 SHALO_RS08980 28c7c80ed04773ae06d84eb4f57799c4 790 SUPERFAMILY SSF103190 150 223 1.8E-8 T 11-11-2016 IPR029151 Periplasmic sensor domain-like SHALO_RS08980 28c7c80ed04773ae06d84eb4f57799c4 790 Pfam PF02743 Cache domain 70 305 2.9E-17 T 11-11-2016 IPR033479 Double Cache domain 1 SHALO_RS08980 28c7c80ed04773ae06d84eb4f57799c4 790 Pfam PF13487 HD domain 649 714 5.7E-21 T 11-11-2016 SHALO_RS08980 28c7c80ed04773ae06d84eb4f57799c4 790 SUPERFAMILY SSF109604 413 514 5.34E-9 T 11-11-2016 SHALO_RS00175 6e3d9b0b9d166b925152a4b0018c9025 219 SUPERFAMILY SSF52833 26 217 7.84E-31 T 11-11-2016 IPR012336 Thioredoxin-like fold SHALO_RS00175 6e3d9b0b9d166b925152a4b0018c9025 219 Pfam PF01323 DSBA-like thioredoxin domain 47 198 7.3E-10 T 11-11-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590 SHALO_RS00175 6e3d9b0b9d166b925152a4b0018c9025 219 PIRSF PIRSF001488 7 219 4.2E-27 T 11-11-2016 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL SHALO_RS00175 6e3d9b0b9d166b925152a4b0018c9025 219 Gene3D G3DSA:3.40.30.10 28 219 7.5E-46 T 11-11-2016 IPR012336 Thioredoxin-like fold SHALO_RS07520 953457bef1f5c7622637c40d53b024b5 156 Gene3D G3DSA:3.40.50.960 13 154 1.5E-57 T 11-11-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 SHALO_RS07520 953457bef1f5c7622637c40d53b024b5 156 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 15 151 8.9E-52 T 11-11-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 SHALO_RS07520 953457bef1f5c7622637c40d53b024b5 156 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 9 154 29.721 T 11-11-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 SHALO_RS07520 953457bef1f5c7622637c40d53b024b5 156 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 15 150 6.4E-55 T 11-11-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 SHALO_RS07520 953457bef1f5c7622637c40d53b024b5 156 SUPERFAMILY SSF52121 9 154 1.02E-56 T 11-11-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 SHALO_RS14330 f8fdead72ba20ee8a786c717f62d954f 268 SUPERFAMILY SSF69572 2 251 2.22E-96 T 11-11-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 SHALO_RS14330 f8fdead72ba20ee8a786c717f62d954f 268 Gene3D G3DSA:3.40.50.720 4 249 2.2E-79 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS14330 f8fdead72ba20ee8a786c717f62d954f 268 Pfam PF00899 ThiF family 12 246 1.2E-65 T 11-11-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 SHALO_RS14420 4699a1a19617f4c8d0f7c9d5e3a1ff2e 132 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 4 122 9.9E-17 T 11-11-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily SHALO_RS14420 4699a1a19617f4c8d0f7c9d5e3a1ff2e 132 SUPERFAMILY SSF52788 1 124 1.57E-33 T 11-11-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily SHALO_RS14420 4699a1a19617f4c8d0f7c9d5e3a1ff2e 132 SMART SM00226 2 129 2.5E-24 T 11-11-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily SHALO_RS14420 4699a1a19617f4c8d0f7c9d5e3a1ff2e 132 Gene3D G3DSA:3.40.50.270 1 124 2.1E-35 T 11-11-2016 SHALO_RS04650 213545ea7e092b47bbfaabbe26d641d4 344 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 29 40 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_RS04650 213545ea7e092b47bbfaabbe26d641d4 344 Pfam PF02754 Cysteine-rich domain 213 292 1.3E-5 T 11-11-2016 IPR004017 Cysteine-rich domain SHALO_RS04650 213545ea7e092b47bbfaabbe26d641d4 344 Pfam PF02754 Cysteine-rich domain 98 178 3.2E-7 T 11-11-2016 IPR004017 Cysteine-rich domain SHALO_RS04650 213545ea7e092b47bbfaabbe26d641d4 344 SUPERFAMILY SSF46548 21 55 6.02E-6 T 11-11-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 SHALO_RS04650 213545ea7e092b47bbfaabbe26d641d4 344 Gene3D G3DSA:1.10.1060.10 24 59 1.4E-5 T 11-11-2016 SHALO_RS06385 d1f3ddafdb10ccedc32eea92eecb9b3b 303 PRINTS PR00091 Nitrogenase component II signature 100 114 3.5E-37 T 11-11-2016 IPR000392 Nitrogenase iron protein, subunit NifH/Protochlorophyllide reductase, subunit ChlL GO:0005524|GO:0016491|GO:0055114 SHALO_RS06385 d1f3ddafdb10ccedc32eea92eecb9b3b 303 PRINTS PR00091 Nitrogenase component II signature 33 48 3.5E-37 T 11-11-2016 IPR000392 Nitrogenase iron protein, subunit NifH/Protochlorophyllide reductase, subunit ChlL GO:0005524|GO:0016491|GO:0055114 SHALO_RS06385 d1f3ddafdb10ccedc32eea92eecb9b3b 303 PRINTS PR00091 Nitrogenase component II signature 10 23 3.5E-37 T 11-11-2016 IPR000392 Nitrogenase iron protein, subunit NifH/Protochlorophyllide reductase, subunit ChlL GO:0005524|GO:0016491|GO:0055114 SHALO_RS06385 d1f3ddafdb10ccedc32eea92eecb9b3b 303 PRINTS PR00091 Nitrogenase component II signature 139 154 3.5E-37 T 11-11-2016 IPR000392 Nitrogenase iron protein, subunit NifH/Protochlorophyllide reductase, subunit ChlL GO:0005524|GO:0016491|GO:0055114 SHALO_RS06385 d1f3ddafdb10ccedc32eea92eecb9b3b 303 ProSitePatterns PS00746 NifH/frxC family signature 1. 102 114 - T 11-11-2016 IPR030655 NifH/chlL conserved site SHALO_RS06385 d1f3ddafdb10ccedc32eea92eecb9b3b 303 SUPERFAMILY SSF52540 5 286 2.09E-52 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS06385 d1f3ddafdb10ccedc32eea92eecb9b3b 303 Gene3D G3DSA:3.40.50.300 6 286 2.3E-70 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS06385 d1f3ddafdb10ccedc32eea92eecb9b3b 303 TIGRFAM TIGR01287 nifH: nitrogenase iron protein 5 291 1.7E-126 T 11-11-2016 IPR005977 Nitrogenase iron protein NifH GO:0009399|GO:0016163|GO:0016612|GO:0055114 KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 SHALO_RS06385 d1f3ddafdb10ccedc32eea92eecb9b3b 303 PIRSF PIRSF000363 3 292 2.0E-111 T 11-11-2016 IPR000392 Nitrogenase iron protein, subunit NifH/Protochlorophyllide reductase, subunit ChlL GO:0005524|GO:0016491|GO:0055114 SHALO_RS06385 d1f3ddafdb10ccedc32eea92eecb9b3b 303 Pfam PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family 5 288 3.2E-123 T 11-11-2016 SHALO_RS06385 d1f3ddafdb10ccedc32eea92eecb9b3b 303 ProSitePatterns PS00692 NifH/frxC family signature 2. 140 153 - T 11-11-2016 IPR030655 NifH/chlL conserved site SHALO_RS11575 f6ea5ae7cdd744500c745f0b482e5929 150 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 1 147 28.987 T 11-11-2016 IPR003791 Protein of unknown function UPF0178 SHALO_RS11575 f6ea5ae7cdd744500c745f0b482e5929 150 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 18 146 2.8E-43 T 11-11-2016 IPR003791 Protein of unknown function UPF0178 SHALO_RS04785 627dbbc097b813d1970385f9b5b1cfc5 173 SUPERFAMILY SSF48695 51 156 1.96E-32 T 11-11-2016 IPR011031 Multihaem cytochrome SHALO_RS04785 627dbbc097b813d1970385f9b5b1cfc5 173 Gene3D G3DSA:4.10.1020.10 68 137 1.3E-26 T 11-11-2016 IPR027406 Periplasmic nitrate reductase NapB subunit, heme binding domain SHALO_RS04785 627dbbc097b813d1970385f9b5b1cfc5 173 Pfam PF03892 Nitrate reductase cytochrome c-type subunit (NapB) 23 151 8.1E-40 T 11-11-2016 IPR005591 Nitrate reductase cytochrome c-type subunit NapB SHALO_RS04785 627dbbc097b813d1970385f9b5b1cfc5 173 PIRSF PIRSF006105 2 166 8.1E-44 T 11-11-2016 IPR005591 Nitrate reductase cytochrome c-type subunit NapB SHALO_RS00830 0c55d83510c82be7c5e1361656c6cc7e 335 PIRSF PIRSF001237 1 334 2.2E-115 T 11-11-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686 SHALO_RS00830 0c55d83510c82be7c5e1361656c6cc7e 335 ProSitePatterns PS00483 Dihydroorotase signature 2. 238 249 - T 11-11-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686 SHALO_RS00830 0c55d83510c82be7c5e1361656c6cc7e 335 SUPERFAMILY SSF51556 3 331 5.96E-103 T 11-11-2016 IPR032466 Metal-dependent hydrolase SHALO_RS00830 0c55d83510c82be7c5e1361656c6cc7e 335 Gene3D G3DSA:3.20.20.140 2 331 8.1E-98 T 11-11-2016 SHALO_RS00830 0c55d83510c82be7c5e1361656c6cc7e 335 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 4 332 7.5E-114 T 11-11-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686 SHALO_RS00830 0c55d83510c82be7c5e1361656c6cc7e 335 Pfam PF01979 Amidohydrolase family 10 258 1.1E-6 T 11-11-2016 IPR006680 Amidohydrolase-related GO:0016787 SHALO_RS04935 ec376a2a0baa5b1481b0814d28acc9a2 203 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 5 105 3.0E-20 T 11-11-2016 IPR013559 YheO-like SHALO_RS04935 ec376a2a0baa5b1481b0814d28acc9a2 203 Pfam PF13309 HTH domain 139 199 1.2E-16 T 11-11-2016 SHALO_RS04935 ec376a2a0baa5b1481b0814d28acc9a2 203 Pfam PF08348 YheO-like PAS domain 5 108 2.1E-24 T 11-11-2016 IPR013559 YheO-like SHALO_RS07355 a300b86b4130fe20a61e8c4f25919b4b 269 SMART SM00382 40 177 2.6E-5 T 11-11-2016 IPR003593 AAA+ ATPase domain SHALO_RS07355 a300b86b4130fe20a61e8c4f25919b4b 269 Gene3D G3DSA:3.40.50.300 33 174 7.4E-15 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS07355 a300b86b4130fe20a61e8c4f25919b4b 269 Pfam PF13401 AAA domain 43 155 4.2E-8 T 11-11-2016 IPR003593 AAA+ ATPase domain SHALO_RS07355 a300b86b4130fe20a61e8c4f25919b4b 269 SUPERFAMILY SSF52540 38 239 4.51E-22 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS12935 7c306c3bf59265b2f639ccb9713aee58 194 Pfam PF02001 Protein of unknown function DUF134 3 87 2.6E-13 T 11-11-2016 IPR002852 Uncharacterised protein family UPF0251 SHALO_RS12935 7c306c3bf59265b2f639ccb9713aee58 194 SUPERFAMILY SSF53146 96 188 6.67E-7 T 11-11-2016 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis SHALO_RS12935 7c306c3bf59265b2f639ccb9713aee58 194 Gene3D G3DSA:3.30.420.130 108 189 1.6E-7 T 11-11-2016 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis SHALO_RS02515 f9944eb6aa5fa1409d3bd90b0dd59da0 228 SUPERFAMILY SSF46894 146 226 3.06E-13 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SHALO_RS02515 f9944eb6aa5fa1409d3bd90b0dd59da0 228 SMART SM00448 11 122 1.9E-27 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS02515 f9944eb6aa5fa1409d3bd90b0dd59da0 228 Pfam PF00072 Response regulator receiver domain 14 122 9.5E-26 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS02515 f9944eb6aa5fa1409d3bd90b0dd59da0 228 SMART SM00862 156 226 9.0E-12 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS02515 f9944eb6aa5fa1409d3bd90b0dd59da0 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 156 226 1.5E-13 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS02515 f9944eb6aa5fa1409d3bd90b0dd59da0 228 SUPERFAMILY SSF52172 9 172 2.28E-33 T 11-11-2016 IPR011006 CheY-like superfamily SHALO_RS02515 f9944eb6aa5fa1409d3bd90b0dd59da0 228 Gene3D G3DSA:3.40.50.2300 8 126 2.0E-31 T 11-11-2016 SHALO_RS02515 f9944eb6aa5fa1409d3bd90b0dd59da0 228 Gene3D G3DSA:1.10.10.10 137 227 8.6E-17 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS02450 e9017dc6ac2d0bf9057201a302f2de8e 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.559 T 11-11-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 SHALO_RS02450 e9017dc6ac2d0bf9057201a302f2de8e 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 2 156 1.2E-67 T 11-11-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 SHALO_RS02450 e9017dc6ac2d0bf9057201a302f2de8e 156 PIRSF PIRSF002122 3 156 3.1E-58 T 11-11-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 SHALO_RS02450 e9017dc6ac2d0bf9057201a302f2de8e 156 Gene3D G3DSA:1.10.455.10 6 156 1.1E-62 T 11-11-2016 IPR023798 Ribosomal protein S7 domain SHALO_RS02450 e9017dc6ac2d0bf9057201a302f2de8e 156 Pfam PF00177 Ribosomal protein S7p/S5e 2 149 3.6E-62 T 11-11-2016 IPR023798 Ribosomal protein S7 domain SHALO_RS02450 e9017dc6ac2d0bf9057201a302f2de8e 156 SUPERFAMILY SSF47973 2 152 7.46E-57 T 11-11-2016 IPR023798 Ribosomal protein S7 domain SHALO_RS02450 e9017dc6ac2d0bf9057201a302f2de8e 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 19 45 - T 11-11-2016 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_RS11355 22f42b387e36cc83ec6199f1f4eef03f 444 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 24 439 3.5E-100 T 11-11-2016 IPR004681 TRAP transporter permease protein GO:0016021 SHALO_RS11355 22f42b387e36cc83ec6199f1f4eef03f 444 PIRSF PIRSF006066 7 444 9.6E-90 T 11-11-2016 IPR004681 TRAP transporter permease protein GO:0016021 SHALO_RS11355 22f42b387e36cc83ec6199f1f4eef03f 444 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 13 434 1.1E-79 T 11-11-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit SHALO_RS02680 466dfc69bf3d08b09521a4db10104d15 162 Pfam PF10788 Protein of unknown function (DUF2603) 13 146 1.1E-45 T 11-11-2016 IPR019724 Uncharacterised protein family UPF0763 SHALO_RS02680 466dfc69bf3d08b09521a4db10104d15 162 Hamap MF_02110 UPF0763 protein . 10 154 25.93 T 11-11-2016 IPR019724 Uncharacterised protein family UPF0763 SHALO_RS05700 d96efb2bb6ee91fd13655cd598f4a852 157 Pfam PF04073 Aminoacyl-tRNA editing domain 26 139 2.3E-23 T 11-11-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 SHALO_RS05700 d96efb2bb6ee91fd13655cd598f4a852 157 SUPERFAMILY SSF55826 4 152 5.62E-32 T 11-11-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 SHALO_RS05700 d96efb2bb6ee91fd13655cd598f4a852 157 Gene3D G3DSA:3.90.960.10 2 154 8.6E-40 T 11-11-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 SHALO_RS07600 8c6effb9a154ee09efdfbdb90607982a 183 SUPERFAMILY SSF52540 2 183 2.26E-50 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS07600 8c6effb9a154ee09efdfbdb90607982a 183 PIRSF PIRSF006135 1 183 1.1E-58 T 11-11-2016 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 SHALO_RS07600 8c6effb9a154ee09efdfbdb90607982a 183 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 3 182 3.2E-57 T 11-11-2016 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 SHALO_RS07600 8c6effb9a154ee09efdfbdb90607982a 183 Gene3D G3DSA:3.40.50.300 2 183 5.4E-61 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS05220 350e6daced258d4555073f9e32ca8094 248 SMART SM00448 11 122 3.1E-26 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS05220 350e6daced258d4555073f9e32ca8094 248 Gene3D G3DSA:3.40.50.2300 11 133 1.9E-33 T 11-11-2016 SHALO_RS05220 350e6daced258d4555073f9e32ca8094 248 SMART SM00862 155 225 8.4E-12 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS05220 350e6daced258d4555073f9e32ca8094 248 Pfam PF00486 Transcriptional regulatory protein, C terminal 159 225 1.2E-11 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS05220 350e6daced258d4555073f9e32ca8094 248 Gene3D G3DSA:1.10.10.10 140 226 7.8E-16 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS05220 350e6daced258d4555073f9e32ca8094 248 SUPERFAMILY SSF52172 10 183 8.25E-36 T 11-11-2016 IPR011006 CheY-like superfamily SHALO_RS05220 350e6daced258d4555073f9e32ca8094 248 Pfam PF00072 Response regulator receiver domain 13 122 2.2E-24 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS10325 5fa37c4695fb5f819eebe7f62e2e9446 802 SUPERFAMILY SSF50692 630 802 8.36E-34 T 11-11-2016 IPR009010 Aspartate decarboxylase-like domain SHALO_RS10325 5fa37c4695fb5f819eebe7f62e2e9446 802 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 4 32 5.7E-4 T 11-11-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal SHALO_RS10325 5fa37c4695fb5f819eebe7f62e2e9446 802 SUPERFAMILY SSF53706 49 685 4.06E-154 T 11-11-2016 SHALO_RS10325 5fa37c4695fb5f819eebe7f62e2e9446 802 TIGRFAM TIGR02166 dmsA_ynfE: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family 4 802 0.0 T 11-11-2016 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE GO:0009389|GO:0030151|GO:0051539|GO:0055114 SHALO_RS10325 5fa37c4695fb5f819eebe7f62e2e9446 802 Pfam PF01568 Molydopterin dinucleotide binding domain 688 794 5.2E-19 T 11-11-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 SHALO_RS10325 5fa37c4695fb5f819eebe7f62e2e9446 802 Gene3D G3DSA:2.40.40.20 660 802 1.4E-44 T 11-11-2016 SHALO_RS10325 5fa37c4695fb5f819eebe7f62e2e9446 802 Gene3D G3DSA:3.40.228.10 191 395 3.0E-60 T 11-11-2016 SHALO_RS10325 5fa37c4695fb5f819eebe7f62e2e9446 802 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 49 104 5.4E-10 T 11-11-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS10325 5fa37c4695fb5f819eebe7f62e2e9446 802 Gene3D G3DSA:3.40.50.740 396 643 1.7E-62 T 11-11-2016 SHALO_RS10325 5fa37c4695fb5f819eebe7f62e2e9446 802 Gene3D G3DSA:3.40.50.740 108 190 1.7E-62 T 11-11-2016 SHALO_RS10325 5fa37c4695fb5f819eebe7f62e2e9446 802 Pfam PF00384 Molybdopterin oxidoreductase 107 562 9.3E-74 T 11-11-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS10325 5fa37c4695fb5f819eebe7f62e2e9446 802 Gene3D G3DSA:2.20.25.90 47 107 2.2E-12 T 11-11-2016 SHALO_RS10325 5fa37c4695fb5f819eebe7f62e2e9446 802 SMART SM00926 45 104 1.8E-4 T 11-11-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS14170 78b4aa7ccc59164292c7ba5cc47a9480 230 Gene3D G3DSA:1.10.10.60 8 55 1.1E-17 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 SHALO_RS14170 78b4aa7ccc59164292c7ba5cc47a9480 230 SUPERFAMILY SSF48498 109 219 6.67E-16 T 11-11-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal SHALO_RS14170 78b4aa7ccc59164292c7ba5cc47a9480 230 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 64 3.7E-14 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SHALO_RS14170 78b4aa7ccc59164292c7ba5cc47a9480 230 SUPERFAMILY SSF46689 8 79 1.85E-16 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 SHALO_RS14170 78b4aa7ccc59164292c7ba5cc47a9480 230 Gene3D G3DSA:1.10.357.10 56 225 1.5E-33 T 11-11-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SHALO_RS14170 78b4aa7ccc59164292c7ba5cc47a9480 230 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 18 31 4.4E-6 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SHALO_RS14170 78b4aa7ccc59164292c7ba5cc47a9480 230 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 39 62 4.4E-6 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SHALO_RS14170 78b4aa7ccc59164292c7ba5cc47a9480 230 Pfam PF09209 Domain of unknown function (DUF1956) 103 212 3.1E-16 T 11-11-2016 IPR015292 Transcription regulator YbiH, C-terminal SHALO_RS06360 2b67e1b29beec4a531bab35093bbe64a 546 Gene3D G3DSA:3.40.190.10 188 313 7.1E-15 T 11-11-2016 SHALO_RS06360 2b67e1b29beec4a531bab35093bbe64a 546 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 83 440 2.8E-41 T 11-11-2016 IPR000914 Solute-binding protein family 5 domain SHALO_RS06360 2b67e1b29beec4a531bab35093bbe64a 546 Gene3D G3DSA:3.90.76.10 53 187 1.8E-21 T 11-11-2016 SHALO_RS06360 2b67e1b29beec4a531bab35093bbe64a 546 SUPERFAMILY SSF53850 35 513 9.77E-56 T 11-11-2016 SHALO_RS15175 d545ccb6b42832c94da6f655e9f9ad16 157 Gene3D G3DSA:3.30.420.10 2 155 9.9E-52 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SHALO_RS15175 d545ccb6b42832c94da6f655e9f9ad16 157 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 106 125 2.2E-21 T 11-11-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 SHALO_RS15175 d545ccb6b42832c94da6f655e9f9ad16 157 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 4 17 2.2E-21 T 11-11-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 SHALO_RS15175 d545ccb6b42832c94da6f655e9f9ad16 157 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 138 150 2.2E-21 T 11-11-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 SHALO_RS15175 d545ccb6b42832c94da6f655e9f9ad16 157 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 60 76 2.2E-21 T 11-11-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 SHALO_RS15175 d545ccb6b42832c94da6f655e9f9ad16 157 SUPERFAMILY SSF53098 2 154 7.33E-42 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SHALO_RS15175 d545ccb6b42832c94da6f655e9f9ad16 157 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 1 153 40.226 T 11-11-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 SHALO_RS15175 d545ccb6b42832c94da6f655e9f9ad16 157 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 3 150 7.0E-57 T 11-11-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 SHALO_RS15175 d545ccb6b42832c94da6f655e9f9ad16 157 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 112 147 - T 11-11-2016 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 SHALO_RS15175 d545ccb6b42832c94da6f655e9f9ad16 157 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 3 155 4.3E-62 T 11-11-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 SHALO_RS05245 9fea55846b25b96695c67bcfe6bada35 721 Gene3D G3DSA:3.90.70.10 11 145 4.2E-36 T 11-11-2016 SHALO_RS05245 9fea55846b25b96695c67bcfe6bada35 721 Pfam PF00664 ABC transporter transmembrane region 177 437 1.8E-20 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SHALO_RS05245 9fea55846b25b96695c67bcfe6bada35 721 SMART SM00382 515 701 2.5E-14 T 11-11-2016 IPR003593 AAA+ ATPase domain SHALO_RS05245 9fea55846b25b96695c67bcfe6bada35 721 SUPERFAMILY SSF52540 481 713 9.49E-73 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS05245 9fea55846b25b96695c67bcfe6bada35 721 Gene3D G3DSA:1.20.1560.10 162 472 1.3E-51 T 11-11-2016 SHALO_RS05245 9fea55846b25b96695c67bcfe6bada35 721 Pfam PF00005 ABC transporter 506 655 1.4E-32 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_RS05245 9fea55846b25b96695c67bcfe6bada35 721 SUPERFAMILY SSF90123 162 472 2.88E-50 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SHALO_RS05245 9fea55846b25b96695c67bcfe6bada35 721 TIGRFAM TIGR03375 type_I_sec_LssB: type I secretion system ATPase 12 716 1.2E-277 T 11-11-2016 IPR017750 ATPase, type I secretion system SHALO_RS05245 9fea55846b25b96695c67bcfe6bada35 721 Gene3D G3DSA:3.40.50.300 489 714 1.6E-70 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS06145 792cef45b802d308f52f0cb161554f2e 103 Pfam PF04891 NifQ 12 98 2.6E-13 T 11-11-2016 IPR006975 NifQ GO:0009399|GO:0030151 SHALO_RS00005 4b2cf63203c17d6290037caa4aac6711 441 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 348 415 5.0E-23 T 11-11-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 SHALO_RS00005 4b2cf63203c17d6290037caa4aac6711 441 ProSitePatterns PS01008 DnaA protein signature. 396 415 - T 11-11-2016 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 SHALO_RS00005 4b2cf63203c17d6290037caa4aac6711 441 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 234 261 7.7E-42 T 11-11-2016 IPR020591 Chromosomal replication control, initiator DnaA-like SHALO_RS00005 4b2cf63203c17d6290037caa4aac6711 441 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 168 182 7.7E-42 T 11-11-2016 IPR020591 Chromosomal replication control, initiator DnaA-like SHALO_RS00005 4b2cf63203c17d6290037caa4aac6711 441 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 200 214 7.7E-42 T 11-11-2016 IPR020591 Chromosomal replication control, initiator DnaA-like SHALO_RS00005 4b2cf63203c17d6290037caa4aac6711 441 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 138 158 7.7E-42 T 11-11-2016 IPR020591 Chromosomal replication control, initiator DnaA-like SHALO_RS00005 4b2cf63203c17d6290037caa4aac6711 441 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 396 415 7.7E-42 T 11-11-2016 IPR020591 Chromosomal replication control, initiator DnaA-like SHALO_RS00005 4b2cf63203c17d6290037caa4aac6711 441 SMART SM00382 137 263 2.5E-9 T 11-11-2016 IPR003593 AAA+ ATPase domain SHALO_RS00005 4b2cf63203c17d6290037caa4aac6711 441 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 1 437 29.761 T 11-11-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 SHALO_RS00005 4b2cf63203c17d6290037caa4aac6711 441 SUPERFAMILY SSF52540 106 311 6.11E-44 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS00005 4b2cf63203c17d6290037caa4aac6711 441 Pfam PF11638 DnaA N-terminal domain 6 64 6.4E-11 T 11-11-2016 IPR024633 DnaA N-terminal domain SHALO_RS00005 4b2cf63203c17d6290037caa4aac6711 441 SUPERFAMILY SSF48295 334 436 4.97E-29 T 11-11-2016 IPR010921 Trp repressor/replication initiator GO:0043565 SHALO_RS00005 4b2cf63203c17d6290037caa4aac6711 441 Gene3D G3DSA:1.10.1750.10 338 436 2.2E-30 T 11-11-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 SHALO_RS00005 4b2cf63203c17d6290037caa4aac6711 441 Gene3D G3DSA:1.10.8.60 269 337 2.5E-23 T 11-11-2016 SHALO_RS00005 4b2cf63203c17d6290037caa4aac6711 441 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 5 436 4.2E-152 T 11-11-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 SHALO_RS00005 4b2cf63203c17d6290037caa4aac6711 441 SMART SM00760 346 415 2.7E-30 T 11-11-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 SHALO_RS00005 4b2cf63203c17d6290037caa4aac6711 441 Pfam PF00308 Bacterial dnaA protein 105 319 1.6E-85 T 11-11-2016 IPR013317 Chromosomal replication initiator protein DnaA SHALO_RS00005 4b2cf63203c17d6290037caa4aac6711 441 Gene3D G3DSA:3.40.50.300 100 265 2.9E-59 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS03300 c1bd1d17bb3ba0a2917c608cd0fda52d 263 Gene3D G3DSA:3.60.110.10 1 256 7.6E-45 T 11-11-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 SHALO_RS03300 c1bd1d17bb3ba0a2917c608cd0fda52d 263 SUPERFAMILY SSF56317 1 253 1.31E-40 T 11-11-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 SHALO_RS03300 c1bd1d17bb3ba0a2917c608cd0fda52d 263 Pfam PF00795 Carbon-nitrogen hydrolase 29 248 2.1E-13 T 11-11-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 SHALO_RS03165 5a57733647057ffe303e032fb6a53fb7 65 Pfam PF10049 Protein of unknown function (DUF2283) 2 49 1.5E-12 T 11-11-2016 IPR019270 Protein of unknown function DUF2283 SHALO_RS13615 ed00391f2a2ac518f102be84b5480608 506 SUPERFAMILY SSF48557 4 505 8.63E-145 T 11-11-2016 IPR008948 L-Aspartase-like GO:0003824 SHALO_RS13615 ed00391f2a2ac518f102be84b5480608 506 Gene3D G3DSA:1.20.200.10 195 505 1.6E-85 T 11-11-2016 SHALO_RS13615 ed00391f2a2ac518f102be84b5480608 506 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 136 152 - T 11-11-2016 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 SHALO_RS13615 ed00391f2a2ac518f102be84b5480608 506 Gene3D G3DSA:1.10.275.10 10 194 2.6E-54 T 11-11-2016 IPR024083 Fumarase/histidase, N-terminal SHALO_RS13615 ed00391f2a2ac518f102be84b5480608 506 Pfam PF00221 Aromatic amino acid lyase 15 478 3.1E-139 T 11-11-2016 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 SHALO_RS09720 b38c1900580c92dcbc1e80e2dd00839c 367 Pfam PF09626 Dihaem cytochrome c 240 357 2.8E-35 T 11-11-2016 IPR018588 Dihaem cytochrome c SHALO_RS09720 b38c1900580c92dcbc1e80e2dd00839c 367 Gene3D G3DSA:1.20.950.20 34 183 9.1E-11 T 11-11-2016 SHALO_RS09720 b38c1900580c92dcbc1e80e2dd00839c 367 SUPERFAMILY SSF48695 233 254 8.95E-5 T 11-11-2016 IPR011031 Multihaem cytochrome SHALO_RS09720 b38c1900580c92dcbc1e80e2dd00839c 367 SUPERFAMILY SSF48695 319 355 8.95E-5 T 11-11-2016 IPR011031 Multihaem cytochrome SHALO_RS09720 b38c1900580c92dcbc1e80e2dd00839c 367 Pfam PF01292 Prokaryotic cytochrome b561 7 181 8.6E-22 T 11-11-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 SHALO_RS09720 b38c1900580c92dcbc1e80e2dd00839c 367 SUPERFAMILY SSF81342 1 186 6.98E-28 T 11-11-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 SHALO_RS08130 bd58f4956dfeddc9d6054bc999bb3c0d 402 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 1 402 27.969 T 11-11-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 SHALO_RS08130 bd58f4956dfeddc9d6054bc999bb3c0d 402 PIRSF PIRSF001549 1 402 5.7E-108 T 11-11-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 SHALO_RS08130 bd58f4956dfeddc9d6054bc999bb3c0d 402 Gene3D G3DSA:3.40.50.800 321 400 2.7E-15 T 11-11-2016 IPR004154 Anticodon-binding SHALO_RS08130 bd58f4956dfeddc9d6054bc999bb3c0d 402 Pfam PF13393 Histidyl-tRNA synthetase 7 307 1.2E-42 T 11-11-2016 SHALO_RS08130 bd58f4956dfeddc9d6054bc999bb3c0d 402 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 4 397 8.7E-136 T 11-11-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 SHALO_RS08130 bd58f4956dfeddc9d6054bc999bb3c0d 402 Pfam PF03129 Anticodon binding domain 343 400 2.4E-6 T 11-11-2016 IPR004154 Anticodon-binding SHALO_RS08130 bd58f4956dfeddc9d6054bc999bb3c0d 402 Gene3D G3DSA:3.30.930.10 3 181 5.4E-86 T 11-11-2016 SHALO_RS08130 bd58f4956dfeddc9d6054bc999bb3c0d 402 Gene3D G3DSA:3.30.930.10 216 312 5.4E-86 T 11-11-2016 SHALO_RS08130 bd58f4956dfeddc9d6054bc999bb3c0d 402 SUPERFAMILY SSF52954 321 401 6.54E-14 T 11-11-2016 IPR004154 Anticodon-binding SHALO_RS08130 bd58f4956dfeddc9d6054bc999bb3c0d 402 SUPERFAMILY SSF55681 2 312 1.99E-87 T 11-11-2016 SHALO_RS00245 c877fc84dd9ee1e2c7e3848629f8c40c 299 Pfam PF00892 EamA-like transporter family 9 138 5.2E-12 T 11-11-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SHALO_RS00245 c877fc84dd9ee1e2c7e3848629f8c40c 299 Pfam PF00892 EamA-like transporter family 155 285 4.1E-15 T 11-11-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SHALO_RS00245 c877fc84dd9ee1e2c7e3848629f8c40c 299 SUPERFAMILY SSF103481 40 139 1.01E-5 T 11-11-2016 SHALO_RS00245 c877fc84dd9ee1e2c7e3848629f8c40c 299 SUPERFAMILY SSF103481 204 286 1.1E-10 T 11-11-2016 SHALO_RS13670 f94b08b7904a8f352d165b63b71ae3bb 369 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 219 327 4.9E-33 T 11-11-2016 IPR014031 Beta-ketoacyl synthase, C-terminal SHALO_RS13670 f94b08b7904a8f352d165b63b71ae3bb 369 Gene3D G3DSA:3.40.47.10 225 366 1.9E-52 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SHALO_RS13670 f94b08b7904a8f352d165b63b71ae3bb 369 SMART SM00825 Beta-ketoacyl synthase 17 365 1.9E-9 T 11-11-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain SHALO_RS13670 f94b08b7904a8f352d165b63b71ae3bb 369 SUPERFAMILY SSF53901 185 365 1.81E-50 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SHALO_RS13670 f94b08b7904a8f352d165b63b71ae3bb 369 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 79 212 1.4E-16 T 11-11-2016 IPR014030 Beta-ketoacyl synthase, N-terminal SHALO_RS13670 f94b08b7904a8f352d165b63b71ae3bb 369 SUPERFAMILY SSF53901 4 213 5.21E-24 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SHALO_RS13670 f94b08b7904a8f352d165b63b71ae3bb 369 Gene3D G3DSA:3.40.47.10 66 214 3.1E-21 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SHALO_RS10455 8505d8d11f495fbf769f6ae087126eb9 396 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 41 163 8.7E-10 T 11-11-2016 SHALO_RS13360 d7842722110ce381b9c46765db690a88 344 Pfam PF00296 Luciferase-like monooxygenase 1 303 1.6E-43 T 11-11-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 SHALO_RS13360 d7842722110ce381b9c46765db690a88 344 Gene3D G3DSA:3.20.20.30 1 336 1.2E-69 T 11-11-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 SHALO_RS13360 d7842722110ce381b9c46765db690a88 344 SUPERFAMILY SSF51679 1 336 3.18E-62 T 11-11-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 SHALO_RS09355 b37a024910b244923d83742bd85ec87b 406 Gene3D G3DSA:3.30.565.10 271 396 4.4E-9 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS09355 b37a024910b244923d83742bd85ec87b 406 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 312 393 3.3E-7 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS09355 b37a024910b244923d83742bd85ec87b 406 SUPERFAMILY SSF55874 268 394 1.66E-12 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS13940 c9886441a8985776e1aecd46048a25f1 363 Pfam PF00990 Diguanylate cyclase, GGDEF domain 198 325 1.6E-10 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS13940 c9886441a8985776e1aecd46048a25f1 363 SMART SM00267 185 351 3.3E-5 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS13940 c9886441a8985776e1aecd46048a25f1 363 SUPERFAMILY SSF55073 203 324 1.41E-11 T 11-11-2016 IPR029787 Nucleotide cyclase SHALO_RS13940 c9886441a8985776e1aecd46048a25f1 363 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 194 326 8.1E-13 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS13940 c9886441a8985776e1aecd46048a25f1 363 Gene3D G3DSA:3.30.70.270 203 332 9.0E-13 T 11-11-2016 SHALO_RS12290 73722d2ade207f9b2d259b16bae341e7 167 Pfam PF00578 AhpC/TSA family 48 116 1.2E-8 T 11-11-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 SHALO_RS12290 73722d2ade207f9b2d259b16bae341e7 167 Gene3D G3DSA:3.40.30.10 6 162 5.2E-21 T 11-11-2016 IPR012336 Thioredoxin-like fold SHALO_RS12290 73722d2ade207f9b2d259b16bae341e7 167 SUPERFAMILY SSF52833 4 160 9.14E-21 T 11-11-2016 IPR012336 Thioredoxin-like fold SHALO_RS08710 2432e947b2b9441d82523e19e1823c6f 400 SUPERFAMILY SSF55021 246 324 5.12E-18 T 11-11-2016 SHALO_RS08710 2432e947b2b9441d82523e19e1823c6f 400 Pfam PF13840 ACT domain 332 394 8.6E-12 T 11-11-2016 IPR027795 GATS-like ACT domain SHALO_RS08710 2432e947b2b9441d82523e19e1823c6f 400 PIRSF PIRSF000726 53 400 1.8E-134 T 11-11-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 SHALO_RS08710 2432e947b2b9441d82523e19e1823c6f 400 SUPERFAMILY SSF53633 3 242 7.59E-75 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase SHALO_RS08710 2432e947b2b9441d82523e19e1823c6f 400 Gene3D G3DSA:3.40.1160.10 1 246 7.1E-73 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase SHALO_RS08710 2432e947b2b9441d82523e19e1823c6f 400 Pfam PF01842 ACT domain 264 325 5.2E-8 T 11-11-2016 IPR002912 ACT domain GO:0008152|GO:0016597 SHALO_RS08710 2432e947b2b9441d82523e19e1823c6f 400 ProSitePatterns PS00324 Aspartokinase signature. 4 12 - T 11-11-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 SHALO_RS08710 2432e947b2b9441d82523e19e1823c6f 400 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 61 397 2.8E-121 T 11-11-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 SHALO_RS08710 2432e947b2b9441d82523e19e1823c6f 400 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 1 398 3.1E-140 T 11-11-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 SHALO_RS08710 2432e947b2b9441d82523e19e1823c6f 400 Gene3D G3DSA:3.30.70.260 263 325 4.4E-5 T 11-11-2016 SHALO_RS08710 2432e947b2b9441d82523e19e1823c6f 400 Pfam PF00696 Amino acid kinase family 1 224 3.6E-51 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase SHALO_RS08710 2432e947b2b9441d82523e19e1823c6f 400 SUPERFAMILY SSF55021 329 399 4.2E-21 T 11-11-2016 SHALO_RS00280 7ddda016ffb76e88684c902130ee2e68 1022 Pfam PF10593 Z1 domain 458 704 3.2E-72 T 11-11-2016 IPR018310 Putative endonuclease, Z1 domain SHALO_RS00280 7ddda016ffb76e88684c902130ee2e68 1022 SUPERFAMILY SSF52540 150 218 3.78E-5 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS00280 7ddda016ffb76e88684c902130ee2e68 1022 SUPERFAMILY SSF52540 253 348 3.78E-5 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS01005 33a62c29380bf20a79030e8899bceb46 298 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 4 276 1.7E-74 T 11-11-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 SHALO_RS01005 33a62c29380bf20a79030e8899bceb46 298 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 3 297 22.037 T 11-11-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 SHALO_RS01005 33a62c29380bf20a79030e8899bceb46 298 Pfam PF01715 IPP transferase 37 275 2.0E-55 T 11-11-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 SHALO_RS01005 33a62c29380bf20a79030e8899bceb46 298 Gene3D G3DSA:3.40.50.300 2 168 3.7E-41 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS01005 33a62c29380bf20a79030e8899bceb46 298 Gene3D G3DSA:1.10.287.890 196 273 2.3E-20 T 11-11-2016 SHALO_RS01005 33a62c29380bf20a79030e8899bceb46 298 SUPERFAMILY SSF52540 2 35 4.03E-8 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS01005 33a62c29380bf20a79030e8899bceb46 298 SUPERFAMILY SSF52540 131 226 4.03E-8 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS01005 33a62c29380bf20a79030e8899bceb46 298 SUPERFAMILY SSF52540 4 134 1.66E-15 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS08035 fea422de992761310dc861582c0b299b 376 Pfam PF01292 Prokaryotic cytochrome b561 10 187 5.6E-19 T 11-11-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 SHALO_RS08035 fea422de992761310dc861582c0b299b 376 Gene3D G3DSA:1.20.950.20 6 192 1.7E-7 T 11-11-2016 SHALO_RS08035 fea422de992761310dc861582c0b299b 376 SUPERFAMILY SSF81342 7 192 8.63E-23 T 11-11-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 SHALO_RS08035 fea422de992761310dc861582c0b299b 376 Pfam PF09626 Dihaem cytochrome c 246 365 1.3E-29 T 11-11-2016 IPR018588 Dihaem cytochrome c SHALO_RS02130 a997132f79f178bb477b829fcd91b375 435 Gene3D G3DSA:1.20.1600.10 21 412 1.1E-34 T 11-11-2016 SHALO_RS02130 a997132f79f178bb477b829fcd91b375 435 Pfam PF02321 Outer membrane efflux protein 25 221 4.4E-17 T 11-11-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SHALO_RS02130 a997132f79f178bb477b829fcd91b375 435 Pfam PF02321 Outer membrane efflux protein 247 412 3.5E-15 T 11-11-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SHALO_RS02130 a997132f79f178bb477b829fcd91b375 435 SUPERFAMILY SSF56954 4 411 2.88E-45 T 11-11-2016 SHALO_RS05870 1a03261a2c8e46d7890c5866433654ea 299 Pfam PF12833 Helix-turn-helix domain 217 294 1.0E-10 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SHALO_RS05870 1a03261a2c8e46d7890c5866433654ea 299 Gene3D G3DSA:1.10.10.60 254 296 6.5E-9 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 SHALO_RS05870 1a03261a2c8e46d7890c5866433654ea 299 Gene3D G3DSA:2.60.120.280 46 176 8.9E-6 T 11-11-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 SHALO_RS05870 1a03261a2c8e46d7890c5866433654ea 299 SMART SM00342 211 294 5.7E-4 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SHALO_RS05870 1a03261a2c8e46d7890c5866433654ea 299 SUPERFAMILY SSF51215 48 176 4.18E-6 T 11-11-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 SHALO_RS05870 1a03261a2c8e46d7890c5866433654ea 299 SUPERFAMILY SSF46689 253 296 3.54E-5 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 SHALO_RS09535 785c3f6536f5e652d4be2bfb4a9361ff 233 Pfam PF04402 Protein of unknown function (DUF541) 26 226 2.2E-10 T 11-11-2016 IPR007497 Protein of unknown function DUF541 SHALO_RS06060 d9c431c64747c6a20b37f25bfee33e2a 127 Gene3D G3DSA:3.30.420.130 1 116 1.7E-27 T 11-11-2016 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis SHALO_RS06060 d9c431c64747c6a20b37f25bfee33e2a 127 SUPERFAMILY SSF53146 1 116 7.98E-24 T 11-11-2016 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis SHALO_RS06060 d9c431c64747c6a20b37f25bfee33e2a 127 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 12 101 7.0E-14 T 11-11-2016 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis SHALO_RS09730 095ea788844379bb4f9c059de620ee95 138 Pfam PF09086 Domain of unknown function (DUF1924) 41 135 2.8E-37 T 11-11-2016 IPR015170 Protein of unknown function DUF1924 SHALO_RS09730 095ea788844379bb4f9c059de620ee95 138 SUPERFAMILY SSF46626 35 137 3.84E-26 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS09730 095ea788844379bb4f9c059de620ee95 138 Gene3D G3DSA:1.10.760.10 24 137 1.2E-41 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS03615 b2efdfe9729d8d14afc501f09df390e5 138 Gene3D G3DSA:3.40.1550.10 42 110 7.8E-7 T 11-11-2016 IPR028976 CheC-like domain SHALO_RS03615 b2efdfe9729d8d14afc501f09df390e5 138 Pfam PF13690 Chemotaxis phosphatase CheX 41 110 6.4E-8 T 11-11-2016 IPR028051 Chemotaxis phosphatase CheX-like domain SHALO_RS03615 b2efdfe9729d8d14afc501f09df390e5 138 SUPERFAMILY SSF103039 35 115 6.15E-9 T 11-11-2016 IPR028976 CheC-like domain SHALO_RS01205 bf0517d8b23c4a24ef6246eaf1ad413a 75 Pfam PF14384 BrnA antitoxin of type II toxin-antitoxin system 17 70 3.4E-9 T 11-11-2016 IPR025528 BrnA antitoxin of type II toxin-antitoxin system SHALO_RS12675 8926fa03445b59965ced46f041e8b841 229 Gene3D G3DSA:3.30.1150.10 122 229 6.2E-15 T 11-11-2016 SHALO_RS12675 8926fa03445b59965ced46f041e8b841 229 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 153 228 1.4E-15 T 11-11-2016 IPR006260 TonB, C-terminal GO:0006810 SHALO_RS12675 8926fa03445b59965ced46f041e8b841 229 SUPERFAMILY SSF74653 129 229 6.02E-16 T 11-11-2016 SHALO_RS12675 8926fa03445b59965ced46f041e8b841 229 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 156 229 1.6E-14 T 11-11-2016 IPR006260 TonB, C-terminal GO:0006810 SHALO_RS07860 2271a1fc0d7abb3bea9ad68c1b2e7d0b 793 Gene3D G3DSA:3.30.1490.20 2 193 3.8E-66 T 11-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SHALO_RS07860 2271a1fc0d7abb3bea9ad68c1b2e7d0b 793 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 4 789 0.0 T 11-11-2016 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484 SHALO_RS07860 2271a1fc0d7abb3bea9ad68c1b2e7d0b 793 Pfam PF00391 PEP-utilising enzyme, mobile domain 383 454 2.0E-24 T 11-11-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 SHALO_RS07860 2271a1fc0d7abb3bea9ad68c1b2e7d0b 793 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 16 345 6.3E-117 T 11-11-2016 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 SHALO_RS07860 2271a1fc0d7abb3bea9ad68c1b2e7d0b 793 PIRSF PIRSF000854 1 793 0.0 T 11-11-2016 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484 SHALO_RS07860 2271a1fc0d7abb3bea9ad68c1b2e7d0b 793 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 711 726 1.2E-5 T 11-11-2016 SHALO_RS07860 2271a1fc0d7abb3bea9ad68c1b2e7d0b 793 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 747 759 1.2E-5 T 11-11-2016 SHALO_RS07860 2271a1fc0d7abb3bea9ad68c1b2e7d0b 793 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 694 709 1.2E-5 T 11-11-2016 SHALO_RS07860 2271a1fc0d7abb3bea9ad68c1b2e7d0b 793 SUPERFAMILY SSF56059 1 380 5.3E-102 T 11-11-2016 SHALO_RS07860 2271a1fc0d7abb3bea9ad68c1b2e7d0b 793 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 476 787 1.1E-62 T 11-11-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 SHALO_RS07860 2271a1fc0d7abb3bea9ad68c1b2e7d0b 793 Gene3D G3DSA:3.20.20.60 479 789 4.3E-101 T 11-11-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SHALO_RS07860 2271a1fc0d7abb3bea9ad68c1b2e7d0b 793 SUPERFAMILY SSF52009 350 463 3.14E-30 T 11-11-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 SHALO_RS07860 2271a1fc0d7abb3bea9ad68c1b2e7d0b 793 Gene3D G3DSA:3.30.470.20 195 340 2.3E-54 T 11-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SHALO_RS07860 2271a1fc0d7abb3bea9ad68c1b2e7d0b 793 SUPERFAMILY SSF51621 460 791 1.23E-94 T 11-11-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SHALO_RS07860 2271a1fc0d7abb3bea9ad68c1b2e7d0b 793 Gene3D G3DSA:3.50.30.10 373 470 1.0E-32 T 11-11-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 SHALO_RS01440 5babd22cc6a50013946adf4858f6b6ac 276 Gene3D G3DSA:3.90.1170.20 2 121 7.2E-37 T 11-11-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 SHALO_RS01440 5babd22cc6a50013946adf4858f6b6ac 276 SUPERFAMILY SSF51690 101 270 6.28E-53 T 11-11-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 SHALO_RS01440 5babd22cc6a50013946adf4858f6b6ac 276 Gene3D G3DSA:3.20.20.70 122 259 4.8E-53 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_RS01440 5babd22cc6a50013946adf4858f6b6ac 276 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 6 270 1.7E-89 T 11-11-2016 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 SHALO_RS01440 5babd22cc6a50013946adf4858f6b6ac 276 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 101 269 2.3E-56 T 11-11-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 SHALO_RS01440 5babd22cc6a50013946adf4858f6b6ac 276 SUPERFAMILY SSF54675 2 100 2.94E-25 T 11-11-2016 SHALO_RS01440 5babd22cc6a50013946adf4858f6b6ac 276 PIRSF PIRSF006250 1 273 9.7E-83 T 11-11-2016 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 SHALO_RS01440 5babd22cc6a50013946adf4858f6b6ac 276 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 14 99 8.5E-23 T 11-11-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 SHALO_RS08915 9f9283a69d641d335b6e3c2056bce601 152 Pfam PF12895 Anaphase-promoting complex, cyclosome, subunit 3 71 130 1.6E-8 T 11-11-2016 SHALO_RS08915 9f9283a69d641d335b6e3c2056bce601 152 SUPERFAMILY SSF48452 74 134 1.14E-6 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SHALO_RS08915 9f9283a69d641d335b6e3c2056bce601 152 Gene3D G3DSA:1.25.40.10 69 130 1.9E-5 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SHALO_RS11570 4928bc801ad5706dfebdea062d0b4862 418 SMART SM00490 259 340 2.8E-29 T 11-11-2016 IPR001650 Helicase, C-terminal SHALO_RS11570 4928bc801ad5706dfebdea062d0b4862 418 Pfam PF00271 Helicase conserved C-terminal domain 234 340 1.9E-26 T 11-11-2016 IPR001650 Helicase, C-terminal SHALO_RS11570 4928bc801ad5706dfebdea062d0b4862 418 Gene3D G3DSA:3.40.50.300 3 212 2.1E-80 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS11570 4928bc801ad5706dfebdea062d0b4862 418 Pfam PF00270 DEAD/DEAH box helicase 25 197 1.3E-49 T 11-11-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SHALO_RS11570 4928bc801ad5706dfebdea062d0b4862 418 SUPERFAMILY SSF52540 77 360 5.63E-74 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS11570 4928bc801ad5706dfebdea062d0b4862 418 SMART SM00487 20 223 3.0E-61 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SHALO_RS11570 4928bc801ad5706dfebdea062d0b4862 418 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 11-11-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site SHALO_RS11570 4928bc801ad5706dfebdea062d0b4862 418 Gene3D G3DSA:3.40.50.300 213 371 1.1E-49 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS09765 5cde8d5e319125cbd4fa73419b176ba7 112 Gene3D G3DSA:2.30.30.40 43 112 4.2E-33 T 11-11-2016 SHALO_RS09765 5cde8d5e319125cbd4fa73419b176ba7 112 Gene3D G3DSA:2.20.25.10 1 39 1.7E-20 T 11-11-2016 SHALO_RS09765 5cde8d5e319125cbd4fa73419b176ba7 112 SUPERFAMILY SSF82057 39 112 3.25E-25 T 11-11-2016 SHALO_RS09765 5cde8d5e319125cbd4fa73419b176ba7 112 SUPERFAMILY SSF57783 1 36 1.02E-13 T 11-11-2016 SHALO_RS09765 5cde8d5e319125cbd4fa73419b176ba7 112 Pfam PF03831 PhnA domain 44 112 1.2E-31 T 11-11-2016 IPR013988 PhnA protein, C-terminal SHALO_RS09765 5cde8d5e319125cbd4fa73419b176ba7 112 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 2 112 1.2E-46 T 11-11-2016 IPR004624 PhnA protein SHALO_RS09765 5cde8d5e319125cbd4fa73419b176ba7 112 Pfam PF08274 PhnA Zinc-Ribbon 2 31 1.2E-13 T 11-11-2016 IPR013987 PhnA protein, N-terminal SHALO_RS07515 fba2c19ee0396291daf55a3df1620a45 356 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 14 209 1.5E-72 T 11-11-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 SHALO_RS07515 fba2c19ee0396291daf55a3df1620a45 356 SUPERFAMILY SSF142695 214 348 9.42E-20 T 11-11-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 SHALO_RS07515 fba2c19ee0396291daf55a3df1620a45 356 Gene3D G3DSA:3.90.870.10 12 221 1.9E-87 T 11-11-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain SHALO_RS07515 fba2c19ee0396291daf55a3df1620a45 356 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 19 208 1.7E-77 T 11-11-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 SHALO_RS07515 fba2c19ee0396291daf55a3df1620a45 356 Pfam PF00925 GTP cyclohydrolase II 302 347 4.0E-7 T 11-11-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 SHALO_RS07515 fba2c19ee0396291daf55a3df1620a45 356 SUPERFAMILY SSF55821 13 212 4.35E-78 T 11-11-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain SHALO_RS07515 fba2c19ee0396291daf55a3df1620a45 356 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 12 213 36.852 T 11-11-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 SHALO_RS01425 7d3ad29ac30cb71900716b19ab8a8e77 111 SMART SM00905 3 106 1.1E-18 T 11-11-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 SHALO_RS01425 7d3ad29ac30cb71900716b19ab8a8e77 111 TIGRFAM TIGR00526 folB_dom: FolB domain 2 110 9.5E-18 T 11-11-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 SHALO_RS01425 7d3ad29ac30cb71900716b19ab8a8e77 111 Pfam PF02152 Dihydroneopterin aldolase 3 103 2.2E-16 T 11-11-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 SHALO_RS01425 7d3ad29ac30cb71900716b19ab8a8e77 111 SUPERFAMILY SSF55620 3 101 3.45E-19 T 11-11-2016 SHALO_RS01425 7d3ad29ac30cb71900716b19ab8a8e77 111 Gene3D G3DSA:3.30.1130.10 2 104 1.2E-17 T 11-11-2016 SHALO_RS14370 e5762bad1efc3417fc11409f81eb0ea6 354 Pfam PF09459 Ethylbenzene dehydrogenase 49 346 3.7E-50 T 11-11-2016 IPR019020 Cytochrome c-552/DMSO reductase-like, haem-binding domain GO:0020037 SHALO_RS14370 e5762bad1efc3417fc11409f81eb0ea6 354 SMART SM00887 48 347 1.7E-47 T 11-11-2016 IPR019020 Cytochrome c-552/DMSO reductase-like, haem-binding domain GO:0020037 SHALO_RS14370 e5762bad1efc3417fc11409f81eb0ea6 354 SUPERFAMILY SSF49344 45 186 8.63E-9 T 11-11-2016 SHALO_RS02510 6eb2900cabba6c7492fe447eb1db71c5 186 SUPERFAMILY SSF46626 131 186 1.21E-6 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS02510 6eb2900cabba6c7492fe447eb1db71c5 186 Gene3D G3DSA:1.10.760.10 129 184 3.0E-5 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS03825 230813ec4344f5fab57539b1b41fb08b 392 Gene3D G3DSA:1.20.120.160 299 388 2.6E-5 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SHALO_RS03825 230813ec4344f5fab57539b1b41fb08b 392 Gene3D G3DSA:1.20.120.160 92 104 2.6E-5 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SHALO_RS03825 230813ec4344f5fab57539b1b41fb08b 392 SUPERFAMILY SSF47226 285 387 1.56E-6 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SHALO_RS01420 7d8a60e4e09056531a08e14d286500ca 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 142 217 2.3E-20 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS01420 7d8a60e4e09056531a08e14d286500ca 223 SMART SM00862 142 217 1.9E-20 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS01420 7d8a60e4e09056531a08e14d286500ca 223 Pfam PF00072 Response regulator receiver domain 3 113 1.8E-24 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS01420 7d8a60e4e09056531a08e14d286500ca 223 Gene3D G3DSA:3.40.50.2300 1 117 5.7E-33 T 11-11-2016 SHALO_RS01420 7d8a60e4e09056531a08e14d286500ca 223 SMART SM00448 1 112 1.6E-31 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS01420 7d8a60e4e09056531a08e14d286500ca 223 SUPERFAMILY SSF52172 1 172 3.95E-34 T 11-11-2016 IPR011006 CheY-like superfamily SHALO_RS01420 7d8a60e4e09056531a08e14d286500ca 223 Gene3D G3DSA:1.10.10.10 121 217 8.1E-28 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS13055 593a67f15cff902fe1c9b660e57435ff 468 PRINTS PR00145 Argininosuccinate lyase family signature 175 195 1.0E-5 T 11-11-2016 SHALO_RS13055 593a67f15cff902fe1c9b660e57435ff 468 PRINTS PR00145 Argininosuccinate lyase family signature 317 333 1.0E-5 T 11-11-2016 SHALO_RS13055 593a67f15cff902fe1c9b660e57435ff 468 PRINTS PR00145 Argininosuccinate lyase family signature 134 156 1.0E-5 T 11-11-2016 SHALO_RS13055 593a67f15cff902fe1c9b660e57435ff 468 SUPERFAMILY SSF48557 3 460 1.05E-142 T 11-11-2016 IPR008948 L-Aspartase-like GO:0003824 SHALO_RS13055 593a67f15cff902fe1c9b660e57435ff 468 Gene3D G3DSA:1.10.40.30 419 465 4.6E-22 T 11-11-2016 SHALO_RS13055 593a67f15cff902fe1c9b660e57435ff 468 Gene3D G3DSA:1.20.200.10 140 418 3.1E-87 T 11-11-2016 SHALO_RS13055 593a67f15cff902fe1c9b660e57435ff 468 PRINTS PR00149 Fumarate lyase superfamily signature 180 198 3.4E-29 T 11-11-2016 IPR000362 Fumarate lyase family SHALO_RS13055 593a67f15cff902fe1c9b660e57435ff 468 PRINTS PR00149 Fumarate lyase superfamily signature 317 333 3.4E-29 T 11-11-2016 IPR000362 Fumarate lyase family SHALO_RS13055 593a67f15cff902fe1c9b660e57435ff 468 PRINTS PR00149 Fumarate lyase superfamily signature 135 153 3.4E-29 T 11-11-2016 IPR000362 Fumarate lyase family SHALO_RS13055 593a67f15cff902fe1c9b660e57435ff 468 PRINTS PR00149 Fumarate lyase superfamily signature 271 298 3.4E-29 T 11-11-2016 IPR000362 Fumarate lyase family SHALO_RS13055 593a67f15cff902fe1c9b660e57435ff 468 ProSitePatterns PS00163 Fumarate lyases signature. 317 326 - T 11-11-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 SHALO_RS13055 593a67f15cff902fe1c9b660e57435ff 468 Gene3D G3DSA:1.10.275.10 2 139 2.0E-53 T 11-11-2016 IPR024083 Fumarase/histidase, N-terminal SHALO_RS13055 593a67f15cff902fe1c9b660e57435ff 468 TIGRFAM TIGR00839 aspA: aspartate ammonia-lyase 4 466 2.6E-228 T 11-11-2016 IPR004708 Aspartate ammonia-lyase GO:0006531|GO:0008797 KEGG: 00250+4.3.1.1 SHALO_RS13055 593a67f15cff902fe1c9b660e57435ff 468 Pfam PF00206 Lyase 14 342 2.0E-102 T 11-11-2016 IPR022761 Fumarate lyase, N-terminal SHALO_RS13055 593a67f15cff902fe1c9b660e57435ff 468 Pfam PF10415 Fumarase C C-terminus 408 460 1.6E-20 T 11-11-2016 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 SHALO_RS12140 bbc8da3fdeb7d5719560be80fe076b13 134 SUPERFAMILY SSF52080 4 123 9.81E-31 T 11-11-2016 IPR021131 Ribosomal protein L18e/L15P SHALO_RS12140 bbc8da3fdeb7d5719560be80fe076b13 134 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 129 14.006 T 11-11-2016 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 SHALO_RS12140 bbc8da3fdeb7d5719560be80fe076b13 134 Gene3D G3DSA:3.100.10.10 33 114 2.8E-15 T 11-11-2016 SHALO_RS12140 bbc8da3fdeb7d5719560be80fe076b13 134 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 3 127 4.5E-39 T 11-11-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS12140 bbc8da3fdeb7d5719560be80fe076b13 134 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 123 1.9E-20 T 11-11-2016 IPR021131 Ribosomal protein L18e/L15P SHALO_RS02470 642b9e97b7e5d4bf9ee58f470d5f76b7 273 PIRSF PIRSF002854 1 273 3.0E-107 T 11-11-2016 IPR004872 Lipoprotein NlpA family SHALO_RS02470 642b9e97b7e5d4bf9ee58f470d5f76b7 273 SUPERFAMILY SSF53850 39 273 8.21E-84 T 11-11-2016 SHALO_RS02470 642b9e97b7e5d4bf9ee58f470d5f76b7 273 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 14 271 2.3E-71 T 11-11-2016 IPR004872 Lipoprotein NlpA family SHALO_RS02470 642b9e97b7e5d4bf9ee58f470d5f76b7 273 Pfam PF03180 NLPA lipoprotein 40 273 3.3E-95 T 11-11-2016 IPR004872 Lipoprotein NlpA family SHALO_RS02470 642b9e97b7e5d4bf9ee58f470d5f76b7 273 Gene3D G3DSA:3.40.190.10 37 165 1.4E-56 T 11-11-2016 SHALO_RS11360 fd5a31dcb3e0444cfa8341b0fcbc54e0 163 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 27 158 4.2E-23 T 11-11-2016 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component SHALO_RS14555 55674df27920054a22b6086263f568e5 186 Pfam PF00692 dUTPase 78 180 2.0E-9 T 11-11-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 SHALO_RS14555 55674df27920054a22b6086263f568e5 186 Gene3D G3DSA:2.70.40.10 3 185 1.9E-66 T 11-11-2016 IPR029054 dUTPase-like SHALO_RS14555 55674df27920054a22b6086263f568e5 186 Hamap MF_00146 Deoxycytidine triphosphate deaminase [dcd]. 1 184 29.289 T 11-11-2016 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187 SHALO_RS14555 55674df27920054a22b6086263f568e5 186 SUPERFAMILY SSF51283 4 185 5.5E-52 T 11-11-2016 IPR029054 dUTPase-like SHALO_RS14555 55674df27920054a22b6086263f568e5 186 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 3 184 2.6E-56 T 11-11-2016 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187 SHALO_RS09255 275b3cfd16a6c9d9ac708cf3e54ac6e9 235 SUPERFAMILY SSF46894 124 226 4.54E-26 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SHALO_RS09255 275b3cfd16a6c9d9ac708cf3e54ac6e9 235 SMART SM00448 5 115 1.6E-27 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS09255 275b3cfd16a6c9d9ac708cf3e54ac6e9 235 SMART SM00862 149 225 2.5E-20 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS09255 275b3cfd16a6c9d9ac708cf3e54ac6e9 235 Gene3D G3DSA:3.40.50.2300 7 124 1.0E-30 T 11-11-2016 SHALO_RS09255 275b3cfd16a6c9d9ac708cf3e54ac6e9 235 Pfam PF00072 Response regulator receiver domain 7 116 5.0E-23 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS09255 275b3cfd16a6c9d9ac708cf3e54ac6e9 235 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 225 1.3E-22 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS09255 275b3cfd16a6c9d9ac708cf3e54ac6e9 235 Gene3D G3DSA:1.10.10.10 128 226 7.7E-30 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS09255 275b3cfd16a6c9d9ac708cf3e54ac6e9 235 SUPERFAMILY SSF52172 4 128 2.13E-32 T 11-11-2016 IPR011006 CheY-like superfamily SHALO_RS15055 553ce58ac971dd974e4c07159e6eef8b 404 Gene3D G3DSA:3.40.250.10 293 378 1.7E-16 T 11-11-2016 IPR001763 Rhodanese-like domain SHALO_RS15055 553ce58ac971dd974e4c07159e6eef8b 404 SMART SM00450 162 261 1.4E-9 T 11-11-2016 IPR001763 Rhodanese-like domain SHALO_RS15055 553ce58ac971dd974e4c07159e6eef8b 404 SMART SM00450 60 160 2.9E-13 T 11-11-2016 IPR001763 Rhodanese-like domain SHALO_RS15055 553ce58ac971dd974e4c07159e6eef8b 404 SMART SM00450 293 392 5.2E-7 T 11-11-2016 IPR001763 Rhodanese-like domain SHALO_RS15055 553ce58ac971dd974e4c07159e6eef8b 404 Pfam PF00581 Rhodanese-like domain 169 258 1.1E-10 T 11-11-2016 IPR001763 Rhodanese-like domain SHALO_RS15055 553ce58ac971dd974e4c07159e6eef8b 404 Pfam PF00581 Rhodanese-like domain 73 156 6.3E-11 T 11-11-2016 IPR001763 Rhodanese-like domain SHALO_RS15055 553ce58ac971dd974e4c07159e6eef8b 404 Pfam PF00581 Rhodanese-like domain 297 372 1.5E-10 T 11-11-2016 IPR001763 Rhodanese-like domain SHALO_RS15055 553ce58ac971dd974e4c07159e6eef8b 404 SUPERFAMILY SSF52821 292 373 3.4E-18 T 11-11-2016 IPR001763 Rhodanese-like domain SHALO_RS15055 553ce58ac971dd974e4c07159e6eef8b 404 Gene3D G3DSA:3.40.250.10 38 162 5.6E-24 T 11-11-2016 IPR001763 Rhodanese-like domain SHALO_RS15055 553ce58ac971dd974e4c07159e6eef8b 404 SUPERFAMILY SSF52821 169 266 2.23E-19 T 11-11-2016 IPR001763 Rhodanese-like domain SHALO_RS15055 553ce58ac971dd974e4c07159e6eef8b 404 Gene3D G3DSA:3.40.250.10 169 268 1.5E-18 T 11-11-2016 IPR001763 Rhodanese-like domain SHALO_RS15055 553ce58ac971dd974e4c07159e6eef8b 404 SUPERFAMILY SSF52821 55 159 2.75E-18 T 11-11-2016 IPR001763 Rhodanese-like domain SHALO_RS11890 dde71b6742c20f8378b9bcbdd82e5200 244 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 219 1.6E-8 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS11890 dde71b6742c20f8378b9bcbdd82e5200 244 SUPERFAMILY SSF46894 133 219 7.94E-12 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SHALO_RS11890 dde71b6742c20f8378b9bcbdd82e5200 244 SMART SM00862 149 219 9.1E-4 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS11890 dde71b6742c20f8378b9bcbdd82e5200 244 Gene3D G3DSA:1.10.10.10 135 221 3.2E-10 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS00275 67dea5942b749581075734b9925020ee 502 Gene3D G3DSA:3.30.565.10 19 236 3.3E-20 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS00275 67dea5942b749581075734b9925020ee 502 SUPERFAMILY SSF55874 5 125 3.42E-15 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS00275 67dea5942b749581075734b9925020ee 502 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 22 157 1.3E-34 T 11-11-2016 SHALO_RS00480 88a7374ae87e95993064fd3ed1b57d7a 340 PIRSF PIRSF000355 1 340 3.0E-112 T 11-11-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 SHALO_RS00480 88a7374ae87e95993064fd3ed1b57d7a 340 SUPERFAMILY SSF47240 14 336 1.43E-86 T 11-11-2016 IPR009078 Ferritin-like superfamily SHALO_RS00480 88a7374ae87e95993064fd3ed1b57d7a 340 Gene3D G3DSA:1.10.620.20 16 313 3.2E-91 T 11-11-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: R-HSA-499943 SHALO_RS00480 88a7374ae87e95993064fd3ed1b57d7a 340 Pfam PF00268 Ribonucleotide reductase, small chain 30 305 4.8E-65 T 11-11-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 SHALO_RS00930 3eef292d45d0e42f4584b8b68adaafe1 169 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 42 148 1.9E-23 T 11-11-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS00930 3eef292d45d0e42f4584b8b68adaafe1 169 SUPERFAMILY SSF56770 16 159 2.22E-65 T 11-11-2016 SHALO_RS00930 3eef292d45d0e42f4584b8b68adaafe1 169 Gene3D G3DSA:3.40.50.700 27 156 4.9E-33 T 11-11-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS00930 3eef292d45d0e42f4584b8b68adaafe1 169 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 16 156 6.3E-75 T 11-11-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS00930 3eef292d45d0e42f4584b8b68adaafe1 169 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 12 155 42.586 T 11-11-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS06070 c037c43b9163188cefb28fdeca77a8b6 448 Gene3D G3DSA:3.40.50.1980 38 175 3.9E-38 T 11-11-2016 SHALO_RS06070 c037c43b9163188cefb28fdeca77a8b6 448 SUPERFAMILY SSF53807 10 440 1.01E-116 T 11-11-2016 SHALO_RS06070 c037c43b9163188cefb28fdeca77a8b6 448 Gene3D G3DSA:3.40.50.1980 315 446 9.5E-30 T 11-11-2016 SHALO_RS06070 c037c43b9163188cefb28fdeca77a8b6 448 Gene3D G3DSA:3.40.50.1980 176 286 3.7E-41 T 11-11-2016 SHALO_RS06070 c037c43b9163188cefb28fdeca77a8b6 448 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 38 431 7.2E-89 T 11-11-2016 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 SHALO_RS08775 66b879a367a6a70ade42dd6a71bcefaf 859 Pfam PF00990 Diguanylate cyclase, GGDEF domain 436 596 7.9E-41 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS08775 66b879a367a6a70ade42dd6a71bcefaf 859 Pfam PF11845 Protein of unknown function (DUF3365) 19 196 4.4E-33 T 11-11-2016 IPR021796 Protein of unknown function DUF3365 SHALO_RS08775 66b879a367a6a70ade42dd6a71bcefaf 859 Gene3D G3DSA:3.30.450.40 276 424 3.0E-8 T 11-11-2016 IPR029016 GAF domain-like SHALO_RS08775 66b879a367a6a70ade42dd6a71bcefaf 859 Gene3D G3DSA:3.30.70.270 436 606 6.7E-48 T 11-11-2016 SHALO_RS08775 66b879a367a6a70ade42dd6a71bcefaf 859 SMART SM00052 610 856 2.3E-107 T 11-11-2016 IPR001633 EAL domain SHALO_RS08775 66b879a367a6a70ade42dd6a71bcefaf 859 SMART SM00267 424 600 3.9E-50 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS08775 66b879a367a6a70ade42dd6a71bcefaf 859 SUPERFAMILY SSF55073 440 602 1.41E-41 T 11-11-2016 IPR029787 Nucleotide cyclase SHALO_RS08775 66b879a367a6a70ade42dd6a71bcefaf 859 Pfam PF00563 EAL domain 616 851 9.7E-72 T 11-11-2016 IPR001633 EAL domain SHALO_RS08775 66b879a367a6a70ade42dd6a71bcefaf 859 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 434 599 3.3E-34 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS08775 66b879a367a6a70ade42dd6a71bcefaf 859 Gene3D G3DSA:3.20.20.450 615 857 9.5E-96 T 11-11-2016 IPR001633 EAL domain SHALO_RS08775 66b879a367a6a70ade42dd6a71bcefaf 859 SUPERFAMILY SSF55781 259 423 3.45E-6 T 11-11-2016 IPR029016 GAF domain-like SHALO_RS08775 66b879a367a6a70ade42dd6a71bcefaf 859 SUPERFAMILY SSF141868 616 857 6.28E-86 T 11-11-2016 IPR001633 EAL domain SHALO_RS14810 70b129db75ad2926887df06ad2015a21 254 Pfam PF01148 Cytidylyltransferase family 11 251 2.2E-49 T 11-11-2016 SHALO_RS14810 70b129db75ad2926887df06ad2015a21 254 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 211 237 - T 11-11-2016 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981 SHALO_RS06355 9412c009ac895a01c12288b3909012fb 554 SUPERFAMILY SSF47384 325 399 2.55E-6 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS06355 9412c009ac895a01c12288b3909012fb 554 SUPERFAMILY SSF55874 398 550 2.36E-29 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS06355 9412c009ac895a01c12288b3909012fb 554 Gene3D G3DSA:3.30.565.10 405 551 1.1E-30 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS06355 9412c009ac895a01c12288b3909012fb 554 PRINTS PR00344 Bacterial sensor protein C-terminal signature 514 532 1.7E-10 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS06355 9412c009ac895a01c12288b3909012fb 554 PRINTS PR00344 Bacterial sensor protein C-terminal signature 538 551 1.7E-10 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS06355 9412c009ac895a01c12288b3909012fb 554 PRINTS PR00344 Bacterial sensor protein C-terminal signature 501 511 1.7E-10 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS06355 9412c009ac895a01c12288b3909012fb 554 PRINTS PR00344 Bacterial sensor protein C-terminal signature 483 497 1.7E-10 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS06355 9412c009ac895a01c12288b3909012fb 554 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 445 552 1.4E-17 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS06355 9412c009ac895a01c12288b3909012fb 554 SMART SM00387 442 554 3.4E-21 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS07630 cf6fdfda7850b81418045afca5f4fcdf 289 SUPERFAMILY SSF53800 17 271 9.68E-79 T 11-11-2016 SHALO_RS07630 cf6fdfda7850b81418045afca5f4fcdf 289 Gene3D G3DSA:3.40.50.1400 188 266 5.5E-22 T 11-11-2016 SHALO_RS07630 cf6fdfda7850b81418045afca5f4fcdf 289 Gene3D G3DSA:3.40.50.1400 13 167 5.0E-41 T 11-11-2016 SHALO_RS07630 cf6fdfda7850b81418045afca5f4fcdf 289 PIRSF PIRSF033579 16 283 2.1E-100 T 11-11-2016 IPR010388 Anaerobic cobalt chelatase GO:0016852|GO:0019251 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 SHALO_RS07630 cf6fdfda7850b81418045afca5f4fcdf 289 Pfam PF06180 Cobalt chelatase (CbiK) 18 271 8.7E-95 T 11-11-2016 IPR010388 Anaerobic cobalt chelatase GO:0016852|GO:0019251 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 SHALO_RS00540 b6b2fc736bce417d9b30c56e0b284db7 281 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 2 268 40.634 T 11-11-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 SHALO_RS00540 b6b2fc736bce417d9b30c56e0b284db7 281 Gene3D G3DSA:3.40.50.150 2 189 1.9E-51 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS00540 b6b2fc736bce417d9b30c56e0b284db7 281 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 33 59 - T 11-11-2016 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 SHALO_RS00540 b6b2fc736bce417d9b30c56e0b284db7 281 SUPERFAMILY SSF53335 4 267 1.6E-47 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS00540 b6b2fc736bce417d9b30c56e0b284db7 281 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 3 262 3.9E-63 T 11-11-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 SHALO_RS00540 b6b2fc736bce417d9b30c56e0b284db7 281 Pfam PF00398 Ribosomal RNA adenine dimethylase 4 242 6.5E-41 T 11-11-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm SHALO_RS00540 b6b2fc736bce417d9b30c56e0b284db7 281 SMART SM00650 18 189 1.5E-55 T 11-11-2016 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 SHALO_RS11540 66bd3652cc7b5110c098f06ec251959f 263 Gene3D G3DSA:3.40.190.10 33 138 4.8E-6 T 11-11-2016 SHALO_RS11540 66bd3652cc7b5110c098f06ec251959f 263 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 32 238 5.1E-12 T 11-11-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SHALO_RS11540 66bd3652cc7b5110c098f06ec251959f 263 Gene3D G3DSA:3.40.190.10 139 214 1.8E-4 T 11-11-2016 SHALO_RS11540 66bd3652cc7b5110c098f06ec251959f 263 SUPERFAMILY SSF53850 31 257 1.18E-20 T 11-11-2016 SHALO_RS07275 b302240081c2675ef3c44e32734bb036 469 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 2 449 4.7E-109 T 11-11-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ SHALO_RS07275 b302240081c2675ef3c44e32734bb036 469 Pfam PF03023 MviN-like protein 28 463 1.2E-103 T 11-11-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ SHALO_RS07275 b302240081c2675ef3c44e32734bb036 469 PIRSF PIRSF002869 1 467 4.1E-118 T 11-11-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ SHALO_RS07275 b302240081c2675ef3c44e32734bb036 469 PRINTS PR01806 Virulence factor MviN signature 124 148 1.9E-53 T 11-11-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ SHALO_RS07275 b302240081c2675ef3c44e32734bb036 469 PRINTS PR01806 Virulence factor MviN signature 32 51 1.9E-53 T 11-11-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ SHALO_RS07275 b302240081c2675ef3c44e32734bb036 469 PRINTS PR01806 Virulence factor MviN signature 148 169 1.9E-53 T 11-11-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ SHALO_RS07275 b302240081c2675ef3c44e32734bb036 469 PRINTS PR01806 Virulence factor MviN signature 51 67 1.9E-53 T 11-11-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ SHALO_RS07275 b302240081c2675ef3c44e32734bb036 469 PRINTS PR01806 Virulence factor MviN signature 358 377 1.9E-53 T 11-11-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ SHALO_RS07275 b302240081c2675ef3c44e32734bb036 469 PRINTS PR01806 Virulence factor MviN signature 260 286 1.9E-53 T 11-11-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ SHALO_RS07275 b302240081c2675ef3c44e32734bb036 469 PRINTS PR01806 Virulence factor MviN signature 410 427 1.9E-53 T 11-11-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ SHALO_RS13135 c19fcd97cb77dc61c518b5ab8e985d6d 277 SMART SM00671 227 262 1.5E-6 T 11-11-2016 IPR006597 Sel1-like repeat SHALO_RS13135 c19fcd97cb77dc61c518b5ab8e985d6d 277 SMART SM00671 85 120 2.6E-8 T 11-11-2016 IPR006597 Sel1-like repeat SHALO_RS13135 c19fcd97cb77dc61c518b5ab8e985d6d 277 SMART SM00671 155 190 2.2E-9 T 11-11-2016 IPR006597 Sel1-like repeat SHALO_RS13135 c19fcd97cb77dc61c518b5ab8e985d6d 277 SMART SM00671 191 226 3.3E-6 T 11-11-2016 IPR006597 Sel1-like repeat SHALO_RS13135 c19fcd97cb77dc61c518b5ab8e985d6d 277 SMART SM00671 121 154 8.1E-7 T 11-11-2016 IPR006597 Sel1-like repeat SHALO_RS13135 c19fcd97cb77dc61c518b5ab8e985d6d 277 SMART SM00671 48 84 1.4E-8 T 11-11-2016 IPR006597 Sel1-like repeat SHALO_RS13135 c19fcd97cb77dc61c518b5ab8e985d6d 277 SUPERFAMILY SSF81901 16 119 3.4E-23 T 11-11-2016 SHALO_RS13135 c19fcd97cb77dc61c518b5ab8e985d6d 277 Pfam PF08238 Sel1 repeat 85 119 6.0E-7 T 11-11-2016 IPR006597 Sel1-like repeat SHALO_RS13135 c19fcd97cb77dc61c518b5ab8e985d6d 277 Pfam PF08238 Sel1 repeat 158 188 1.9E-5 T 11-11-2016 IPR006597 Sel1-like repeat SHALO_RS13135 c19fcd97cb77dc61c518b5ab8e985d6d 277 Pfam PF08238 Sel1 repeat 196 225 0.21 T 11-11-2016 IPR006597 Sel1-like repeat SHALO_RS13135 c19fcd97cb77dc61c518b5ab8e985d6d 277 Pfam PF08238 Sel1 repeat 48 83 6.0E-8 T 11-11-2016 IPR006597 Sel1-like repeat SHALO_RS13135 c19fcd97cb77dc61c518b5ab8e985d6d 277 Pfam PF08238 Sel1 repeat 229 261 1.2E-4 T 11-11-2016 IPR006597 Sel1-like repeat SHALO_RS13135 c19fcd97cb77dc61c518b5ab8e985d6d 277 Pfam PF08238 Sel1 repeat 120 152 2.6E-6 T 11-11-2016 IPR006597 Sel1-like repeat SHALO_RS13135 c19fcd97cb77dc61c518b5ab8e985d6d 277 SUPERFAMILY SSF81901 121 269 1.66E-38 T 11-11-2016 SHALO_RS13135 c19fcd97cb77dc61c518b5ab8e985d6d 277 Gene3D G3DSA:1.25.40.10 21 273 1.2E-69 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SHALO_RS09370 06a50d12dc7c74e7c8869adca0b87c8e 315 Gene3D G3DSA:1.20.1510.10 24 242 3.7E-51 T 11-11-2016 IPR027469 Cation efflux protein transmembrane domain SHALO_RS09370 06a50d12dc7c74e7c8869adca0b87c8e 315 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 24 297 3.6E-68 T 11-11-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 SHALO_RS09370 06a50d12dc7c74e7c8869adca0b87c8e 315 Pfam PF01545 Cation efflux family 29 242 2.7E-42 T 11-11-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 SHALO_RS09370 06a50d12dc7c74e7c8869adca0b87c8e 315 SUPERFAMILY SSF161111 22 243 3.01E-51 T 11-11-2016 SHALO_RS10275 69d36df8b9bbea4a156fb9fdc8440657 476 SUPERFAMILY SSF54368 8 106 9.55E-34 T 11-11-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SHALO_RS10275 69d36df8b9bbea4a156fb9fdc8440657 476 Pfam PF00120 Glutamine synthetase, catalytic domain 108 471 1.3E-124 T 11-11-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SHALO_RS10275 69d36df8b9bbea4a156fb9fdc8440657 476 SMART SM01230 107 385 2.3E-141 T 11-11-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SHALO_RS10275 69d36df8b9bbea4a156fb9fdc8440657 476 Gene3D G3DSA:3.30.590.10 111 455 2.4E-121 T 11-11-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 SHALO_RS10275 69d36df8b9bbea4a156fb9fdc8440657 476 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 264 279 - T 11-11-2016 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 SHALO_RS10275 69d36df8b9bbea4a156fb9fdc8440657 476 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 9 474 2.6E-191 T 11-11-2016 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SHALO_RS10275 69d36df8b9bbea4a156fb9fdc8440657 476 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 19 99 6.5E-31 T 11-11-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SHALO_RS10275 69d36df8b9bbea4a156fb9fdc8440657 476 ProSitePatterns PS00180 Glutamine synthetase signature 1. 55 73 - T 11-11-2016 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 SHALO_RS10275 69d36df8b9bbea4a156fb9fdc8440657 476 SUPERFAMILY SSF55931 108 475 1.67E-121 T 11-11-2016 SHALO_RS10275 69d36df8b9bbea4a156fb9fdc8440657 476 Gene3D G3DSA:3.10.20.70 8 110 5.4E-35 T 11-11-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SHALO_RS03295 251b7a8109cdaea33fd7b9d3aed2559c 67 SUPERFAMILY SSF116842 2 63 3.4E-12 T 11-11-2016 SHALO_RS03295 251b7a8109cdaea33fd7b9d3aed2559c 67 Pfam PF02609 Exonuclease VII small subunit 8 56 7.9E-13 T 11-11-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 SHALO_RS03295 251b7a8109cdaea33fd7b9d3aed2559c 67 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 7 67 10.891 T 11-11-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 SHALO_RS03295 251b7a8109cdaea33fd7b9d3aed2559c 67 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 7 62 5.4E-15 T 11-11-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 SHALO_RS03295 251b7a8109cdaea33fd7b9d3aed2559c 67 Gene3D G3DSA:1.10.287.1040 3 64 4.4E-12 T 11-11-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 SHALO_RS12525 f216050706e4d9f21c35c14fb0d29117 124 Pfam PF04266 ASCH domain 5 72 2.6E-4 T 11-11-2016 IPR007374 ASCH domain SHALO_RS12525 f216050706e4d9f21c35c14fb0d29117 124 Gene3D G3DSA:2.30.130.30 3 105 7.1E-15 T 11-11-2016 SHALO_RS12525 f216050706e4d9f21c35c14fb0d29117 124 SMART SM01022 5 99 3.7E-7 T 11-11-2016 IPR007374 ASCH domain SHALO_RS12525 f216050706e4d9f21c35c14fb0d29117 124 SUPERFAMILY SSF88697 1 122 4.47E-24 T 11-11-2016 IPR015947 PUA-like domain SHALO_RS12405 fe91359ec567fe0bd9eb14b2a8ddc91e 172 SMART SM00271 104 167 1.0E-8 T 11-11-2016 IPR001623 DnaJ domain SHALO_RS12405 fe91359ec567fe0bd9eb14b2a8ddc91e 172 SUPERFAMILY SSF46565 101 169 2.09E-13 T 11-11-2016 IPR001623 DnaJ domain SHALO_RS12405 fe91359ec567fe0bd9eb14b2a8ddc91e 172 PRINTS PR00625 DnaJ domain signature 125 140 2.0E-6 T 11-11-2016 IPR001623 DnaJ domain SHALO_RS12405 fe91359ec567fe0bd9eb14b2a8ddc91e 172 PRINTS PR00625 DnaJ domain signature 147 167 2.0E-6 T 11-11-2016 IPR001623 DnaJ domain SHALO_RS12405 fe91359ec567fe0bd9eb14b2a8ddc91e 172 PRINTS PR00625 DnaJ domain signature 107 125 2.0E-6 T 11-11-2016 IPR001623 DnaJ domain SHALO_RS12405 fe91359ec567fe0bd9eb14b2a8ddc91e 172 Pfam PF00226 DnaJ domain 105 169 4.5E-11 T 11-11-2016 IPR001623 DnaJ domain SHALO_RS12405 fe91359ec567fe0bd9eb14b2a8ddc91e 172 Gene3D G3DSA:1.10.287.110 105 169 2.1E-13 T 11-11-2016 IPR001623 DnaJ domain SHALO_RS09360 5c280cf987cdf42d02fdbf9a8fdebddf 219 SMART SM00862 143 217 1.6E-8 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS09360 5c280cf987cdf42d02fdbf9a8fdebddf 219 Gene3D G3DSA:1.10.10.10 129 218 5.3E-15 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS09360 5c280cf987cdf42d02fdbf9a8fdebddf 219 Gene3D G3DSA:3.40.50.2300 2 120 1.5E-34 T 11-11-2016 SHALO_RS09360 5c280cf987cdf42d02fdbf9a8fdebddf 219 SUPERFAMILY SSF46894 129 218 2.15E-13 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SHALO_RS09360 5c280cf987cdf42d02fdbf9a8fdebddf 219 Pfam PF00072 Response regulator receiver domain 4 111 3.0E-23 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS09360 5c280cf987cdf42d02fdbf9a8fdebddf 219 Pfam PF00486 Transcriptional regulatory protein, C terminal 144 217 2.4E-11 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS09360 5c280cf987cdf42d02fdbf9a8fdebddf 219 SUPERFAMILY SSF52172 1 125 4.41E-35 T 11-11-2016 IPR011006 CheY-like superfamily SHALO_RS09360 5c280cf987cdf42d02fdbf9a8fdebddf 219 SMART SM00448 2 111 3.2E-35 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS13835 593c8130feee2442cbab1b0e417b2058 381 SUPERFAMILY SSF51419 23 253 1.31E-43 T 11-11-2016 IPR029066 PLP-binding barrel SHALO_RS13835 593c8130feee2442cbab1b0e417b2058 381 PIRSF PIRSF038941 4 381 8.3E-174 T 11-11-2016 IPR005730 Carboxynorspermidine decarboxylase KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 SHALO_RS13835 593c8130feee2442cbab1b0e417b2058 381 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 269 356 1.8E-10 T 11-11-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 SHALO_RS13835 593c8130feee2442cbab1b0e417b2058 381 Gene3D G3DSA:2.40.37.10 244 357 6.2E-23 T 11-11-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 SHALO_RS13835 593c8130feee2442cbab1b0e417b2058 381 Gene3D G3DSA:3.20.20.10 30 243 1.6E-19 T 11-11-2016 IPR029066 PLP-binding barrel SHALO_RS13835 593c8130feee2442cbab1b0e417b2058 381 TIGRFAM TIGR01047 nspC: carboxynorspermidine decarboxylase 14 381 1.1E-164 T 11-11-2016 IPR005730 Carboxynorspermidine decarboxylase KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 SHALO_RS13835 593c8130feee2442cbab1b0e417b2058 381 SUPERFAMILY SSF50621 218 369 1.86E-31 T 11-11-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 SHALO_RS08450 7aa065e77ef664b5d00c987c3b1fe664 434 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 157 1.0E-38 T 11-11-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 SHALO_RS08450 7aa065e77ef664b5d00c987c3b1fe664 434 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 316 413 3.7E-18 T 11-11-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 SHALO_RS08450 7aa065e77ef664b5d00c987c3b1fe664 434 SUPERFAMILY SSF51735 164 309 2.41E-25 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS08450 7aa065e77ef664b5d00c987c3b1fe664 434 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 413 2.7E-119 T 11-11-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 SHALO_RS08450 7aa065e77ef664b5d00c987c3b1fe664 434 Gene3D G3DSA:3.40.50.720 164 306 7.1E-27 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS08450 7aa065e77ef664b5d00c987c3b1fe664 434 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 100 123 - T 11-11-2016 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 SHALO_RS08450 7aa065e77ef664b5d00c987c3b1fe664 434 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 174 301 5.6E-34 T 11-11-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase SHALO_RS08450 7aa065e77ef664b5d00c987c3b1fe664 434 SUPERFAMILY SSF69075 313 414 1.22E-12 T 11-11-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 SHALO_RS08450 7aa065e77ef664b5d00c987c3b1fe664 434 PIRSF PIRSF000445 1 427 1.1E-122 T 11-11-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 SHALO_RS08450 7aa065e77ef664b5d00c987c3b1fe664 434 SUPERFAMILY SSF69742 1 159 9.55E-41 T 11-11-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 SHALO_RS08450 7aa065e77ef664b5d00c987c3b1fe664 434 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 411 25.428 T 11-11-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 SHALO_RS13255 3749bdd266042a71630b2bd693ecca25 558 SMART SM00091 136 204 0.23 T 11-11-2016 IPR000014 PAS domain SHALO_RS13255 3749bdd266042a71630b2bd693ecca25 558 SMART SM00091 259 325 1.4E-4 T 11-11-2016 IPR000014 PAS domain SHALO_RS13255 3749bdd266042a71630b2bd693ecca25 558 SUPERFAMILY SSF55785 268 370 6.63E-27 T 11-11-2016 IPR000014 PAS domain SHALO_RS13255 3749bdd266042a71630b2bd693ecca25 558 SUPERFAMILY SSF55785 143 256 1.29E-12 T 11-11-2016 IPR000014 PAS domain SHALO_RS13255 3749bdd266042a71630b2bd693ecca25 558 SUPERFAMILY SSF55073 389 553 4.87E-45 T 11-11-2016 IPR029787 Nucleotide cyclase SHALO_RS13255 3749bdd266042a71630b2bd693ecca25 558 Pfam PF00990 Diguanylate cyclase, GGDEF domain 384 546 4.2E-46 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS13255 3749bdd266042a71630b2bd693ecca25 558 Gene3D G3DSA:3.30.70.270 385 554 5.0E-51 T 11-11-2016 SHALO_RS13255 3749bdd266042a71630b2bd693ecca25 558 Gene3D G3DSA:3.30.450.20 126 272 4.4E-23 T 11-11-2016 SHALO_RS13255 3749bdd266042a71630b2bd693ecca25 558 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 260 379 1.3E-20 T 11-11-2016 IPR000014 PAS domain SHALO_RS13255 3749bdd266042a71630b2bd693ecca25 558 SMART SM00086 210 253 7.4 T 11-11-2016 IPR001610 PAC motif SHALO_RS13255 3749bdd266042a71630b2bd693ecca25 558 SMART SM00086 331 373 0.056 T 11-11-2016 IPR001610 PAC motif SHALO_RS13255 3749bdd266042a71630b2bd693ecca25 558 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 381 550 6.1E-41 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS13255 3749bdd266042a71630b2bd693ecca25 558 Pfam PF08447 PAS fold 159 246 3.2E-13 T 11-11-2016 IPR013655 PAS fold-3 GO:0005515 SHALO_RS13255 3749bdd266042a71630b2bd693ecca25 558 Pfam PF13426 PAS domain 270 372 1.7E-16 T 11-11-2016 IPR000014 PAS domain SHALO_RS13255 3749bdd266042a71630b2bd693ecca25 558 Gene3D G3DSA:3.30.450.20 273 371 1.4E-26 T 11-11-2016 SHALO_RS13255 3749bdd266042a71630b2bd693ecca25 558 SMART SM00267 373 551 9.8E-57 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS12985 0a7f807dd6801b74baf440cd9d715474 86 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 25 53 3.6E-5 T 11-11-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM SHALO_RS12985 0a7f807dd6801b74baf440cd9d715474 86 SUPERFAMILY SSF143120 2 69 1.7E-9 T 11-11-2016 SHALO_RS12985 0a7f807dd6801b74baf440cd9d715474 86 Gene3D G3DSA:3.40.1620.10 3 48 4.3E-4 T 11-11-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM SHALO_RS05675 aa45221100d962f27f2ea771401ff54f 269 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 216 6.9E-29 T 11-11-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain SHALO_RS05675 aa45221100d962f27f2ea771401ff54f 269 SUPERFAMILY SSF52540 1 249 8.14E-52 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS05675 aa45221100d962f27f2ea771401ff54f 269 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 3 268 6.3E-117 T 11-11-2016 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 SHALO_RS05675 aa45221100d962f27f2ea771401ff54f 269 Gene3D G3DSA:3.40.50.300 2 246 7.3E-61 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS05675 aa45221100d962f27f2ea771401ff54f 269 PIRSF PIRSF003092 1 269 8.0E-85 T 11-11-2016 IPR025501 ATP binding protein MinD SHALO_RS04635 7eba10ce18eba133b88b19d9815b8ade 363 Gene3D G3DSA:3.90.1200.10 122 249 4.1E-11 T 11-11-2016 SHALO_RS04635 7eba10ce18eba133b88b19d9815b8ade 363 SUPERFAMILY SSF56112 23 356 7.66E-53 T 11-11-2016 IPR011009 Protein kinase-like domain SHALO_RS04635 7eba10ce18eba133b88b19d9815b8ade 363 Pfam PF01636 Phosphotransferase enzyme family 105 250 1.8E-12 T 11-11-2016 IPR002575 Aminoglycoside phosphotransferase SHALO_RS04630 18bfc9336deb0c7c758e060677265ed9 442 SUPERFAMILY SSF53448 212 415 7.88E-28 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases SHALO_RS04630 18bfc9336deb0c7c758e060677265ed9 442 SUPERFAMILY SSF53448 8 194 1.03E-27 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases SHALO_RS04630 18bfc9336deb0c7c758e060677265ed9 442 Gene3D G3DSA:3.90.550.10 215 398 8.2E-17 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases SHALO_RS04630 18bfc9336deb0c7c758e060677265ed9 442 TIGRFAM TIGR04282 glyco_like_cofC: transferase 1, rSAM/selenodomain-associated 6 191 2.8E-52 T 11-11-2016 IPR018641 Transferase 1, rSAM/selenodomain-associated SHALO_RS04630 18bfc9336deb0c7c758e060677265ed9 442 Pfam PF09837 Uncharacterized protein conserved in bacteria (DUF2064) 49 160 1.1E-29 T 11-11-2016 IPR018641 Transferase 1, rSAM/selenodomain-associated SHALO_RS04630 18bfc9336deb0c7c758e060677265ed9 442 TIGRFAM TIGR04283 glyco_like_mftF: transferase 2, rSAM/selenodomain-associated 217 436 7.2E-68 T 11-11-2016 IPR026461 Transferase 2, rSAM/selenodomain-associated SHALO_RS04630 18bfc9336deb0c7c758e060677265ed9 442 Pfam PF00535 Glycosyl transferase family 2 218 339 3.7E-14 T 11-11-2016 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 SHALO_RS04630 18bfc9336deb0c7c758e060677265ed9 442 Gene3D G3DSA:3.90.550.10 7 164 8.2E-22 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases SHALO_RS09335 ea67c66f88dce292bf1fb58fa1af81a5 222 Gene3D G3DSA:3.40.50.2300 1 127 9.5E-32 T 11-11-2016 SHALO_RS09335 ea67c66f88dce292bf1fb58fa1af81a5 222 SMART SM00448 1 112 5.7E-30 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS09335 ea67c66f88dce292bf1fb58fa1af81a5 222 SMART SM00862 145 217 7.9E-10 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS09335 ea67c66f88dce292bf1fb58fa1af81a5 222 Gene3D G3DSA:1.10.10.10 130 219 1.3E-14 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS09335 ea67c66f88dce292bf1fb58fa1af81a5 222 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 216 4.5E-12 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS09335 ea67c66f88dce292bf1fb58fa1af81a5 222 Pfam PF00072 Response regulator receiver domain 3 112 1.2E-23 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS09335 ea67c66f88dce292bf1fb58fa1af81a5 222 SUPERFAMILY SSF52172 1 179 1.99E-34 T 11-11-2016 IPR011006 CheY-like superfamily SHALO_RS14620 9c845410710850e9b794c0d439162be4 352 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 254 1.3E-54 T 11-11-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 SHALO_RS14620 9c845410710850e9b794c0d439162be4 352 PRINTS PR01713 Nucleotide sugar epimerase signature 230 245 6.3E-27 T 11-11-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-5609977|Reactome: R-HSA-70370 SHALO_RS14620 9c845410710850e9b794c0d439162be4 352 PRINTS PR01713 Nucleotide sugar epimerase signature 29 45 6.3E-27 T 11-11-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-5609977|Reactome: R-HSA-70370 SHALO_RS14620 9c845410710850e9b794c0d439162be4 352 PRINTS PR01713 Nucleotide sugar epimerase signature 270 285 6.3E-27 T 11-11-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-5609977|Reactome: R-HSA-70370 SHALO_RS14620 9c845410710850e9b794c0d439162be4 352 PRINTS PR01713 Nucleotide sugar epimerase signature 309 326 6.3E-27 T 11-11-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-5609977|Reactome: R-HSA-70370 SHALO_RS14620 9c845410710850e9b794c0d439162be4 352 Gene3D G3DSA:3.40.50.720 1 238 3.3E-71 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS14620 9c845410710850e9b794c0d439162be4 352 SUPERFAMILY SSF51735 1 347 3.61E-88 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS14620 9c845410710850e9b794c0d439162be4 352 Gene3D G3DSA:3.90.25.10 274 345 3.7E-18 T 11-11-2016 SHALO_RS03660 8c3274a1e973029c90972d633d097f5b 215 Pfam PF01863 Protein of unknown function DUF45 106 209 3.7E-34 T 11-11-2016 IPR002725 Protein of unknown function DUF45 SHALO_RS03195 238f23deef2bfc75ecc8cde618a0cdd3 96 SUPERFAMILY SSF81301 1 96 2.62E-20 T 11-11-2016 SHALO_RS03195 238f23deef2bfc75ecc8cde618a0cdd3 96 Pfam PF01909 Nucleotidyltransferase domain 13 95 5.6E-15 T 11-11-2016 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 SHALO_RS03195 238f23deef2bfc75ecc8cde618a0cdd3 96 Gene3D G3DSA:3.30.460.10 1 96 1.2E-24 T 11-11-2016 SHALO_RS06475 9ddcda544c3c15e9f3f817da774e301a 250 SMART SM00749 106 169 7.3E-4 T 11-11-2016 IPR014004 Transport-associated and nodulation domain, bacteria SHALO_RS06475 9ddcda544c3c15e9f3f817da774e301a 250 SMART SM00749 183 246 27.0 T 11-11-2016 IPR014004 Transport-associated and nodulation domain, bacteria SHALO_RS06475 9ddcda544c3c15e9f3f817da774e301a 250 SMART SM00749 31 94 24.0 T 11-11-2016 IPR014004 Transport-associated and nodulation domain, bacteria SHALO_RS06475 9ddcda544c3c15e9f3f817da774e301a 250 Pfam PF04972 BON domain 178 244 3.8E-11 T 11-11-2016 IPR007055 BON domain SHALO_RS06475 9ddcda544c3c15e9f3f817da774e301a 250 Pfam PF04972 BON domain 101 167 1.3E-17 T 11-11-2016 IPR007055 BON domain SHALO_RS06475 9ddcda544c3c15e9f3f817da774e301a 250 Pfam PF04972 BON domain 27 93 1.5E-14 T 11-11-2016 IPR007055 BON domain SHALO_RS00940 e9ffbdb8f851e55c8ac89240e90e5518 408 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 136 408 6.0E-109 T 11-11-2016 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS00940 e9ffbdb8f851e55c8ac89240e90e5518 408 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 17 408 46.03 T 11-11-2016 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS00940 e9ffbdb8f851e55c8ac89240e90e5518 408 Gene3D G3DSA:1.10.645.10 14 394 3.0E-59 T 11-11-2016 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS00940 e9ffbdb8f851e55c8ac89240e90e5518 408 SUPERFAMILY SSF56762 32 408 3.53E-120 T 11-11-2016 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS00940 e9ffbdb8f851e55c8ac89240e90e5518 408 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 22 408 6.6E-183 T 11-11-2016 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS14205 985a818cf0ad6ee122bf7f8ee53f9400 527 Gene3D G3DSA:3.90.700.10 317 463 7.6E-22 T 11-11-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_RS14205 985a818cf0ad6ee122bf7f8ee53f9400 527 Pfam PF00890 FAD binding domain 47 512 2.3E-74 T 11-11-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_RS14205 985a818cf0ad6ee122bf7f8ee53f9400 527 SUPERFAMILY SSF51905 35 314 6.06E-50 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHALO_RS14205 985a818cf0ad6ee122bf7f8ee53f9400 527 SUPERFAMILY SSF51905 471 527 6.06E-50 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHALO_RS14205 985a818cf0ad6ee122bf7f8ee53f9400 527 SUPERFAMILY SSF56425 299 472 4.19E-26 T 11-11-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_RS14205 985a818cf0ad6ee122bf7f8ee53f9400 527 Gene3D G3DSA:3.50.50.60 33 297 4.7E-83 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHALO_RS14205 985a818cf0ad6ee122bf7f8ee53f9400 527 Gene3D G3DSA:3.50.50.60 468 527 4.7E-83 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHALO_RS14205 985a818cf0ad6ee122bf7f8ee53f9400 527 TIGRFAM TIGR01813 flavo_cyto_c: flavocytochrome c 47 525 4.0E-131 T 11-11-2016 IPR010960 Flavocytochrome c GO:0000104|GO:0055114 SHALO_RS01970 5eb4a869a57044a5f0dbcc2a889eb13e 377 Gene3D G3DSA:3.90.1150.10 251 374 9.3E-21 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SHALO_RS01970 5eb4a869a57044a5f0dbcc2a889eb13e 377 PIRSF PIRSF000390 1 376 3.7E-105 T 11-11-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase SHALO_RS01970 5eb4a869a57044a5f0dbcc2a889eb13e 377 SUPERFAMILY SSF53383 2 374 3.54E-99 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase SHALO_RS01970 5eb4a869a57044a5f0dbcc2a889eb13e 377 Gene3D G3DSA:3.40.640.10 1 248 2.4E-73 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SHALO_RS01970 5eb4a869a57044a5f0dbcc2a889eb13e 377 TIGRFAM TIGR02379 ECA_wecE: TDP-4-keto-6-deoxy-D-glucose transaminase 1 373 3.2E-195 T 11-11-2016 IPR012749 dTDP-4-amino-4,6-dideoxygalactose transaminase WecE-like MetaCyc: PWY-7315 SHALO_RS01970 5eb4a869a57044a5f0dbcc2a889eb13e 377 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 13 371 4.4E-84 T 11-11-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase SHALO_RS10005 18e293d50204c385bf2a84b79e356a84 220 Pfam PF00633 Helix-hairpin-helix motif 112 134 1.8E-5 T 11-11-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 SHALO_RS10005 18e293d50204c385bf2a84b79e356a84 220 SMART SM00478 39 186 9.2E-22 T 11-11-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 SHALO_RS10005 18e293d50204c385bf2a84b79e356a84 220 SUPERFAMILY SSF48150 15 205 2.2E-40 T 11-11-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 SHALO_RS10005 18e293d50204c385bf2a84b79e356a84 220 Gene3D G3DSA:1.10.340.30 24 124 1.0E-33 T 11-11-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 SHALO_RS10005 18e293d50204c385bf2a84b79e356a84 220 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 35 152 1.8E-16 T 11-11-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 SHALO_RS10005 18e293d50204c385bf2a84b79e356a84 220 Gene3D G3DSA:1.10.1670.10 125 211 6.2E-34 T 11-11-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 SHALO_RS11805 4e0661edc44f9bc9577c4608275c6e10 117 SUPERFAMILY SSF46785 2 107 1.84E-26 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS11805 4e0661edc44f9bc9577c4608275c6e10 117 Pfam PF01638 HxlR-like helix-turn-helix 19 105 3.5E-24 T 11-11-2016 IPR002577 Helix-turn-helix, HxlR type SHALO_RS11805 4e0661edc44f9bc9577c4608275c6e10 117 Gene3D G3DSA:1.10.10.10 3 108 9.2E-32 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS11470 0822a659c893ece88127c95454a3f8ca 336 Pfam PF16363 GDP-mannose 4,6 dehydratase 6 326 2.3E-93 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS11470 0822a659c893ece88127c95454a3f8ca 336 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 4 334 2.8E-140 T 11-11-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 SHALO_RS11470 0822a659c893ece88127c95454a3f8ca 336 Gene3D G3DSA:3.40.50.720 2 195 3.4E-66 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS11470 0822a659c893ece88127c95454a3f8ca 336 SUPERFAMILY SSF51735 4 335 5.72E-86 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS11470 0822a659c893ece88127c95454a3f8ca 336 Gene3D G3DSA:3.90.25.10 196 335 3.9E-48 T 11-11-2016 SHALO_RS04685 ab97cee548ef95b4ab19b425ede9ed5f 378 Gene3D G3DSA:3.20.20.70 291 345 1.7E-33 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_RS04685 ab97cee548ef95b4ab19b425ede9ed5f 378 Gene3D G3DSA:3.20.20.70 121 254 1.7E-33 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_RS04685 ab97cee548ef95b4ab19b425ede9ed5f 378 SUPERFAMILY SSF54675 10 107 1.31E-6 T 11-11-2016 SHALO_RS04685 ab97cee548ef95b4ab19b425ede9ed5f 378 Gene3D G3DSA:3.90.1170.20 31 120 7.5E-5 T 11-11-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 SHALO_RS04685 ab97cee548ef95b4ab19b425ede9ed5f 378 SUPERFAMILY SSF51690 115 249 2.86E-31 T 11-11-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 SHALO_RS04685 ab97cee548ef95b4ab19b425ede9ed5f 378 SUPERFAMILY SSF51690 286 370 2.86E-31 T 11-11-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 SHALO_RS00585 fd0c47c17421bde4af1ba5c5441c3368 201 Gene3D G3DSA:3.40.50.300 4 193 4.3E-62 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS00585 fd0c47c17421bde4af1ba5c5441c3368 201 SUPERFAMILY SSF52540 7 191 2.09E-35 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS00585 fd0c47c17421bde4af1ba5c5441c3368 201 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 4 195 25.282 T 11-11-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24 SHALO_RS00585 fd0c47c17421bde4af1ba5c5441c3368 201 Pfam PF01121 Dephospho-CoA kinase 7 175 4.8E-47 T 11-11-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24 SHALO_RS00585 fd0c47c17421bde4af1ba5c5441c3368 201 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 7 186 1.2E-48 T 11-11-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24 SHALO_RS04845 0136cf7e3cab13885fd89254f4e22ba3 247 SUPERFAMILY SSF52821 134 239 1.31E-16 T 11-11-2016 IPR001763 Rhodanese-like domain SHALO_RS04845 0136cf7e3cab13885fd89254f4e22ba3 247 SUPERFAMILY SSF57662 15 118 7.19E-22 T 11-11-2016 IPR004209 Ferredoxin thioredoxin reductase catalytic beta subunit GO:0016730|GO:0055114 SHALO_RS04845 0136cf7e3cab13885fd89254f4e22ba3 247 SMART SM00450 147 245 6.5E-11 T 11-11-2016 IPR001763 Rhodanese-like domain SHALO_RS04845 0136cf7e3cab13885fd89254f4e22ba3 247 Gene3D G3DSA:3.40.250.10 138 244 2.3E-18 T 11-11-2016 IPR001763 Rhodanese-like domain SHALO_RS04845 0136cf7e3cab13885fd89254f4e22ba3 247 Pfam PF02943 Ferredoxin thioredoxin reductase catalytic beta chain 16 121 1.1E-33 T 11-11-2016 IPR004209 Ferredoxin thioredoxin reductase catalytic beta subunit GO:0016730|GO:0055114 SHALO_RS04845 0136cf7e3cab13885fd89254f4e22ba3 247 Pfam PF00581 Rhodanese-like domain 148 240 9.6E-11 T 11-11-2016 IPR001763 Rhodanese-like domain SHALO_RS04845 0136cf7e3cab13885fd89254f4e22ba3 247 Gene3D G3DSA:3.90.460.10 7 124 3.2E-26 T 11-11-2016 IPR004209 Ferredoxin thioredoxin reductase catalytic beta subunit GO:0016730|GO:0055114 SHALO_RS09220 80e6427f56f0edc84a209a1cb0d8467e 343 SMART SM00471 155 292 7.6E-9 T 11-11-2016 IPR003607 HD/PDEase domain SHALO_RS09220 80e6427f56f0edc84a209a1cb0d8467e 343 SUPERFAMILY SSF52172 1 149 6.26E-35 T 11-11-2016 IPR011006 CheY-like superfamily SHALO_RS09220 80e6427f56f0edc84a209a1cb0d8467e 343 Pfam PF01966 HD domain 160 281 4.5E-21 T 11-11-2016 IPR006674 HD domain SHALO_RS09220 80e6427f56f0edc84a209a1cb0d8467e 343 Gene3D G3DSA:1.10.3210.10 157 320 8.0E-22 T 11-11-2016 IPR006674 HD domain SHALO_RS09220 80e6427f56f0edc84a209a1cb0d8467e 343 Gene3D G3DSA:3.40.50.2300 2 127 1.2E-36 T 11-11-2016 SHALO_RS09220 80e6427f56f0edc84a209a1cb0d8467e 343 SUPERFAMILY SSF109604 152 321 1.81E-37 T 11-11-2016 SHALO_RS09220 80e6427f56f0edc84a209a1cb0d8467e 343 SMART SM00448 2 113 1.1E-31 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS09220 80e6427f56f0edc84a209a1cb0d8467e 343 Pfam PF00072 Response regulator receiver domain 4 113 2.5E-23 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS05895 fea9622e90209230e07eb938cc87e3b0 295 Gene3D G3DSA:1.10.443.10 112 288 4.6E-24 T 11-11-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 SHALO_RS05895 fea9622e90209230e07eb938cc87e3b0 295 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 2 59 2.1E-11 T 11-11-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 SHALO_RS05895 fea9622e90209230e07eb938cc87e3b0 295 SUPERFAMILY SSF56349 1 285 1.32E-45 T 11-11-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 SHALO_RS05895 fea9622e90209230e07eb938cc87e3b0 295 Pfam PF00589 Phage integrase family 127 276 2.1E-15 T 11-11-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 SHALO_RS05895 fea9622e90209230e07eb938cc87e3b0 295 Gene3D G3DSA:1.10.150.130 1 99 1.1E-11 T 11-11-2016 IPR023109 Integrase/recombinase, N-terminal SHALO_RS06700 0921577ba7f28315da480a41490c5ef5 171 SUPERFAMILY SSF47240 14 160 2.12E-34 T 11-11-2016 IPR009078 Ferritin-like superfamily SHALO_RS06700 0921577ba7f28315da480a41490c5ef5 171 Gene3D G3DSA:1.20.1260.10 11 160 5.0E-40 T 11-11-2016 IPR012347 Ferritin-related SHALO_RS06700 0921577ba7f28315da480a41490c5ef5 171 PIRSF PIRSF018063 1 163 2.2E-55 T 11-11-2016 IPR014490 Uncharacterised conserved protein UCP018063, ferritin fold SHALO_RS06700 0921577ba7f28315da480a41490c5ef5 171 Pfam PF00210 Ferritin-like domain 19 159 2.4E-29 T 11-11-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 SHALO_RS06745 046f4c656e0c0586678139311da9e90b 257 Pfam PF01618 MotA/TolQ/ExbB proton channel family 103 217 2.6E-18 T 11-11-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 SHALO_RS10375 9514d36f023c1d26128d257296e52c5b 98 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 3 98 17.198 T 11-11-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 SHALO_RS10375 9514d36f023c1d26128d257296e52c5b 98 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 28 44 5.9E-13 T 11-11-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 SHALO_RS10375 9514d36f023c1d26128d257296e52c5b 98 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 83 96 5.9E-13 T 11-11-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 SHALO_RS10375 9514d36f023c1d26128d257296e52c5b 98 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 62 78 5.9E-13 T 11-11-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 SHALO_RS10375 9514d36f023c1d26128d257296e52c5b 98 Pfam PF02049 Flagellar hook-basal body complex protein FliE 13 98 3.1E-25 T 11-11-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 SHALO_RS10375 9514d36f023c1d26128d257296e52c5b 98 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 13 98 1.9E-26 T 11-11-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 SHALO_RS14315 e8dced2a891c64ea8da6d81075e55215 292 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 25 244 3.5E-39 T 11-11-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 Reactome: R-HSA-196843 SHALO_RS14315 e8dced2a891c64ea8da6d81075e55215 292 SUPERFAMILY SSF52402 2 225 2.05E-52 T 11-11-2016 SHALO_RS14315 e8dced2a891c64ea8da6d81075e55215 292 Gene3D G3DSA:3.40.50.620 3 240 1.6E-50 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHALO_RS08260 d4a6a00d5bc8c3a32da0424831300619 261 Pfam PF01544 CorA-like Mg2+ transporter protein 79 257 9.1E-31 T 11-11-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 SHALO_RS08260 d4a6a00d5bc8c3a32da0424831300619 261 Gene3D G3DSA:1.20.58.340 74 173 3.4E-5 T 11-11-2016 SHALO_RS08260 d4a6a00d5bc8c3a32da0424831300619 261 Gene3D G3DSA:1.20.58.340 183 251 8.8E-19 T 11-11-2016 SHALO_RS08260 d4a6a00d5bc8c3a32da0424831300619 261 SUPERFAMILY SSF143865 8 191 1.57E-7 T 11-11-2016 SHALO_RS08260 d4a6a00d5bc8c3a32da0424831300619 261 SUPERFAMILY SSF144083 195 252 1.83E-14 T 11-11-2016 SHALO_RS03525 3ba81b1316675f548142ad82c58ec194 292 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 161 179 7.1E-38 T 11-11-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 SHALO_RS03525 3ba81b1316675f548142ad82c58ec194 292 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 198 215 7.1E-38 T 11-11-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 SHALO_RS03525 3ba81b1316675f548142ad82c58ec194 292 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 227 238 7.1E-38 T 11-11-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 SHALO_RS03525 3ba81b1316675f548142ad82c58ec194 292 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 127 141 7.1E-38 T 11-11-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 SHALO_RS03525 3ba81b1316675f548142ad82c58ec194 292 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 249 258 7.1E-38 T 11-11-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 SHALO_RS03525 3ba81b1316675f548142ad82c58ec194 292 Gene3D G3DSA:3.90.226.10 21 277 5.8E-72 T 11-11-2016 IPR029045 ClpP/crotonase-like domain SHALO_RS03525 3ba81b1316675f548142ad82c58ec194 292 Pfam PF01039 Carboxyl transferase domain 58 238 2.2E-20 T 11-11-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 SHALO_RS03525 3ba81b1316675f548142ad82c58ec194 292 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 2 277 3.5E-130 T 11-11-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 SHALO_RS03525 3ba81b1316675f548142ad82c58ec194 292 SUPERFAMILY SSF52096 24 277 2.81E-82 T 11-11-2016 IPR029045 ClpP/crotonase-like domain SHALO_RS03525 3ba81b1316675f548142ad82c58ec194 292 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 4 279 38.466 T 11-11-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 SHALO_RS12050 cde98ccf52bd68f7453687d39629d37e 218 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 99 112 1.3E-7 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SHALO_RS12050 cde98ccf52bd68f7453687d39629d37e 218 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 130 146 1.3E-7 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SHALO_RS12050 cde98ccf52bd68f7453687d39629d37e 218 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 2 13 1.3E-7 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SHALO_RS12050 cde98ccf52bd68f7453687d39629d37e 218 Gene3D G3DSA:1.10.150.240 17 75 3.1E-13 T 11-11-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 SHALO_RS12050 cde98ccf52bd68f7453687d39629d37e 218 SUPERFAMILY SSF56784 1 217 1.01E-55 T 11-11-2016 IPR023214 HAD-like domain SHALO_RS12050 cde98ccf52bd68f7453687d39629d37e 218 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 82 180 5.5E-8 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SHALO_RS12050 cde98ccf52bd68f7453687d39629d37e 218 Gene3D G3DSA:3.40.50.1000 76 215 2.3E-36 T 11-11-2016 IPR023214 HAD-like domain SHALO_RS12050 cde98ccf52bd68f7453687d39629d37e 218 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 185 4.5E-33 T 11-11-2016 IPR023214 HAD-like domain SHALO_RS00805 9415219f77ef808d39af9e1755d5cf26 219 Pfam PF05732 Firmicute plasmid replication protein (RepL) 146 208 3.6E-5 T 11-11-2016 IPR008813 Plasmid replication protein, RepL GO:0006260|GO:0006276 SHALO_RS00805 9415219f77ef808d39af9e1755d5cf26 219 Gene3D G3DSA:1.10.10.10 155 208 1.4E-5 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS00805 9415219f77ef808d39af9e1755d5cf26 219 SMART SM00448 9 121 1.0E-25 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS00805 9415219f77ef808d39af9e1755d5cf26 219 SUPERFAMILY SSF52172 10 125 1.2E-32 T 11-11-2016 IPR011006 CheY-like superfamily SHALO_RS00805 9415219f77ef808d39af9e1755d5cf26 219 Pfam PF00072 Response regulator receiver domain 11 121 5.6E-25 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS00805 9415219f77ef808d39af9e1755d5cf26 219 SUPERFAMILY SSF46785 150 206 3.75E-5 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS00805 9415219f77ef808d39af9e1755d5cf26 219 Gene3D G3DSA:3.40.50.2300 11 126 3.4E-31 T 11-11-2016 SHALO_RS10225 328317614c324283830efb9bf2ae9115 242 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 88 102 - T 11-11-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 SHALO_RS10225 328317614c324283830efb9bf2ae9115 242 Pfam PF00849 RNA pseudouridylate synthase 80 195 8.5E-27 T 11-11-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 SHALO_RS10225 328317614c324283830efb9bf2ae9115 242 SUPERFAMILY SSF55120 53 239 1.3E-47 T 11-11-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SHALO_RS01815 cc1675d9aa6cf2f5671e4a8d868ae1f3 548 SUPERFAMILY SSF55785 189 298 3.66E-12 T 11-11-2016 IPR000014 PAS domain SHALO_RS01815 cc1675d9aa6cf2f5671e4a8d868ae1f3 548 SUPERFAMILY SSF47384 324 391 5.89E-6 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS01815 cc1675d9aa6cf2f5671e4a8d868ae1f3 548 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 202 315 1.2E-13 T 11-11-2016 IPR000014 PAS domain SHALO_RS01815 cc1675d9aa6cf2f5671e4a8d868ae1f3 548 Pfam PF13426 PAS domain 210 314 9.5E-10 T 11-11-2016 IPR000014 PAS domain SHALO_RS01815 cc1675d9aa6cf2f5671e4a8d868ae1f3 548 Gene3D G3DSA:3.30.450.20 191 312 7.5E-14 T 11-11-2016 SHALO_RS01815 cc1675d9aa6cf2f5671e4a8d868ae1f3 548 SMART SM00091 199 265 5.1E-6 T 11-11-2016 IPR000014 PAS domain SHALO_RS01815 cc1675d9aa6cf2f5671e4a8d868ae1f3 548 Gene3D G3DSA:3.30.565.10 398 542 9.3E-21 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS01815 cc1675d9aa6cf2f5671e4a8d868ae1f3 548 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 435 542 2.9E-9 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS01815 cc1675d9aa6cf2f5671e4a8d868ae1f3 548 SUPERFAMILY SSF55874 392 543 3.01E-20 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS01815 cc1675d9aa6cf2f5671e4a8d868ae1f3 548 PRINTS PR00344 Bacterial sensor protein C-terminal signature 493 503 9.7E-6 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS01815 cc1675d9aa6cf2f5671e4a8d868ae1f3 548 PRINTS PR00344 Bacterial sensor protein C-terminal signature 475 489 9.7E-6 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS01815 cc1675d9aa6cf2f5671e4a8d868ae1f3 548 PRINTS PR00344 Bacterial sensor protein C-terminal signature 529 542 9.7E-6 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS01815 cc1675d9aa6cf2f5671e4a8d868ae1f3 548 PRINTS PR00344 Bacterial sensor protein C-terminal signature 505 523 9.7E-6 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS01815 cc1675d9aa6cf2f5671e4a8d868ae1f3 548 SMART SM00387 434 545 7.8E-7 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS11785 55129b5877b24130652d387ce4f8450e 192 PIRSF PIRSF000370 1 192 1.6E-41 T 11-11-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 SHALO_RS11785 55129b5877b24130652d387ce4f8450e 192 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 2 192 36.863 T 11-11-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 SHALO_RS11785 55129b5877b24130652d387ce4f8450e 192 Pfam PF04055 Radical SAM superfamily 26 130 1.9E-11 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SHALO_RS11785 55129b5877b24130652d387ce4f8450e 192 Pfam PF13353 4Fe-4S single cluster domain 11 107 2.5E-8 T 11-11-2016 SHALO_RS11785 55129b5877b24130652d387ce4f8450e 192 SUPERFAMILY SSF102114 24 102 2.35E-13 T 11-11-2016 SHALO_RS11785 55129b5877b24130652d387ce4f8450e 192 Gene3D G3DSA:3.20.20.70 28 102 7.0E-13 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_RS08385 999b73ab92640894a444815945145652 207 SUPERFAMILY SSF48498 82 182 2.91E-7 T 11-11-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal SHALO_RS08385 999b73ab92640894a444815945145652 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 2.6E-11 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SHALO_RS08385 999b73ab92640894a444815945145652 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 2.6E-11 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SHALO_RS08385 999b73ab92640894a444815945145652 207 Gene3D G3DSA:1.10.357.10 5 199 3.6E-33 T 11-11-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SHALO_RS08385 999b73ab92640894a444815945145652 207 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 58 3.2E-17 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SHALO_RS08385 999b73ab92640894a444815945145652 207 SUPERFAMILY SSF46689 3 84 8.48E-19 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 SHALO_RS08385 999b73ab92640894a444815945145652 207 ProSitePatterns PS01081 TetR-type HTH domain signature. 26 57 - T 11-11-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site SHALO_RS11010 170bd34cfff2f944ce5a591c8379e2fc 356 Gene3D G3DSA:2.30.30.60 198 247 9.1E-18 T 11-11-2016 SHALO_RS11010 170bd34cfff2f944ce5a591c8379e2fc 356 Gene3D G3DSA:3.30.70.100 251 339 7.0E-14 T 11-11-2016 SHALO_RS11010 170bd34cfff2f944ce5a591c8379e2fc 356 Pfam PF00924 Mechanosensitive ion channel 142 341 2.4E-64 T 11-11-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 SHALO_RS11010 170bd34cfff2f944ce5a591c8379e2fc 356 SUPERFAMILY SSF82861 96 181 3.79E-13 T 11-11-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 SHALO_RS11010 170bd34cfff2f944ce5a591c8379e2fc 356 SUPERFAMILY SSF82689 249 352 3.01E-19 T 11-11-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 SHALO_RS11010 170bd34cfff2f944ce5a591c8379e2fc 356 SUPERFAMILY SSF50182 182 248 1.05E-17 T 11-11-2016 IPR010920 LSM domain SHALO_RS07540 a8a7b2ee8848785dc43e7eb768321e40 138 Pfam PF01592 NifU-like N terminal domain 14 130 4.4E-9 T 11-11-2016 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 SHALO_RS07540 a8a7b2ee8848785dc43e7eb768321e40 138 Gene3D G3DSA:3.90.1010.10 15 131 7.7E-11 T 11-11-2016 SHALO_RS07540 a8a7b2ee8848785dc43e7eb768321e40 138 SUPERFAMILY SSF82649 15 129 3.92E-16 T 11-11-2016 SHALO_RS05595 38484d0ddb70498e21ad8b89524c3ce4 605 Pfam PF00271 Helicase conserved C-terminal domain 420 531 1.0E-13 T 11-11-2016 IPR001650 Helicase, C-terminal SHALO_RS05595 38484d0ddb70498e21ad8b89524c3ce4 605 SUPERFAMILY SSF50249 11 147 2.57E-6 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold SHALO_RS05595 38484d0ddb70498e21ad8b89524c3ce4 605 Gene3D G3DSA:3.40.50.300 405 573 1.5E-27 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS05595 38484d0ddb70498e21ad8b89524c3ce4 605 Gene3D G3DSA:2.40.50.140 60 118 4.5E-5 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold SHALO_RS05595 38484d0ddb70498e21ad8b89524c3ce4 605 SUPERFAMILY SSF52540 278 546 7.23E-38 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS05595 38484d0ddb70498e21ad8b89524c3ce4 605 SMART SM00490 452 531 2.5E-10 T 11-11-2016 IPR001650 Helicase, C-terminal SHALO_RS05595 38484d0ddb70498e21ad8b89524c3ce4 605 Gene3D G3DSA:3.40.50.300 222 403 1.3E-39 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS05595 38484d0ddb70498e21ad8b89524c3ce4 605 Pfam PF00270 DEAD/DEAH box helicase 232 384 1.6E-11 T 11-11-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SHALO_RS05595 38484d0ddb70498e21ad8b89524c3ce4 605 SMART SM00487 227 407 3.8E-18 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SHALO_RS10025 6b5f1b9c9d0e43ceeb190b4cd1e5554b 299 Gene3D G3DSA:2.70.70.10 141 263 3.4E-43 T 11-11-2016 SHALO_RS10025 6b5f1b9c9d0e43ceeb190b4cd1e5554b 299 Pfam PF01551 Peptidase family M23 161 258 1.1E-29 T 11-11-2016 IPR016047 Peptidase M23 SHALO_RS10025 6b5f1b9c9d0e43ceeb190b4cd1e5554b 299 SUPERFAMILY SSF51261 24 261 1.41E-50 T 11-11-2016 IPR011055 Duplicated hybrid motif SHALO_RS06320 88c796638fed3125a7e3fda44a447c27 284 Gene3D G3DSA:3.30.470.10 4 117 3.5E-31 T 11-11-2016 SHALO_RS06320 88c796638fed3125a7e3fda44a447c27 284 SUPERFAMILY SSF56752 1 278 1.14E-70 T 11-11-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 SHALO_RS06320 88c796638fed3125a7e3fda44a447c27 284 Gene3D G3DSA:3.20.10.10 125 277 7.9E-46 T 11-11-2016 SHALO_RS06320 88c796638fed3125a7e3fda44a447c27 284 Pfam PF01063 Amino-transferase class IV 31 253 5.0E-40 T 11-11-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 SHALO_RS02315 43e3a26015a9c1e062b88cf28eeaea7c 77 Pfam PF09905 Uncharacterized conserved protein (DUF2132) 8 69 7.7E-33 T 11-11-2016 IPR018668 DNA-binding protein VF530-like, bacteria GO:0003677 SHALO_RS02315 43e3a26015a9c1e062b88cf28eeaea7c 77 Gene3D G3DSA:1.10.720.30 15 71 3.7E-28 T 11-11-2016 IPR003034 SAP domain SHALO_RS02140 335a3652989691748a88b9477eb8fe4f 441 Pfam PF13533 Biotin-lipoyl like 78 111 1.9E-7 T 11-11-2016 SHALO_RS02140 335a3652989691748a88b9477eb8fe4f 441 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 39 62 2.9E-42 T 11-11-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 SHALO_RS02140 335a3652989691748a88b9477eb8fe4f 441 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 405 420 2.9E-42 T 11-11-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 SHALO_RS02140 335a3652989691748a88b9477eb8fe4f 441 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 420 440 2.9E-42 T 11-11-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 SHALO_RS02140 335a3652989691748a88b9477eb8fe4f 441 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 81 101 2.9E-42 T 11-11-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 SHALO_RS02140 335a3652989691748a88b9477eb8fe4f 441 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 305 326 2.9E-42 T 11-11-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 SHALO_RS02140 335a3652989691748a88b9477eb8fe4f 441 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 338 362 2.9E-42 T 11-11-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 SHALO_RS02140 335a3652989691748a88b9477eb8fe4f 441 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 362 385 2.9E-42 T 11-11-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 SHALO_RS02140 335a3652989691748a88b9477eb8fe4f 441 Pfam PF13437 HlyD family secretion protein 293 408 4.5E-12 T 11-11-2016 SHALO_RS02140 335a3652989691748a88b9477eb8fe4f 441 SUPERFAMILY SSF111369 62 142 3.66E-6 T 11-11-2016 SHALO_RS02140 335a3652989691748a88b9477eb8fe4f 441 Gene3D G3DSA:2.40.50.100 290 325 7.2E-19 T 11-11-2016 SHALO_RS02140 335a3652989691748a88b9477eb8fe4f 441 Gene3D G3DSA:2.40.50.100 74 103 7.2E-19 T 11-11-2016 SHALO_RS02140 335a3652989691748a88b9477eb8fe4f 441 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 30 438 1.4E-87 T 11-11-2016 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 SHALO_RS02140 335a3652989691748a88b9477eb8fe4f 441 ProSitePatterns PS00543 HlyD family secretion proteins signature. 405 427 - T 11-11-2016 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 SHALO_RS05550 396a3539c8ec558d74747e1e777794a5 217 Pfam PF02163 Peptidase family M50 130 195 1.6E-6 T 11-11-2016 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033 SHALO_RS14360 6d99e1a723b242236d04a86a1158f6f2 339 SUPERFAMILY SSF52402 1 232 2.03E-41 T 11-11-2016 SHALO_RS14360 6d99e1a723b242236d04a86a1158f6f2 339 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 1 338 34.738 T 11-11-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 Reactome: R-HSA-6787450 SHALO_RS14360 6d99e1a723b242236d04a86a1158f6f2 339 Gene3D G3DSA:3.40.50.620 2 197 1.0E-61 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHALO_RS14360 6d99e1a723b242236d04a86a1158f6f2 339 Gene3D G3DSA:2.30.30.280 205 262 3.7E-19 T 11-11-2016 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 Reactome: R-HSA-6787450 SHALO_RS14360 6d99e1a723b242236d04a86a1158f6f2 339 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 1 337 4.7E-106 T 11-11-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 Reactome: R-HSA-6787450 SHALO_RS14360 6d99e1a723b242236d04a86a1158f6f2 339 Gene3D G3DSA:2.40.30.10 271 338 4.3E-15 T 11-11-2016 SHALO_RS14360 6d99e1a723b242236d04a86a1158f6f2 339 Pfam PF03054 tRNA methyl transferase 1 337 1.3E-103 T 11-11-2016 SHALO_RS07545 197448a564205d3e10331d274d845239 535 PRINTS PR00344 Bacterial sensor protein C-terminal signature 464 478 5.3E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS07545 197448a564205d3e10331d274d845239 535 PRINTS PR00344 Bacterial sensor protein C-terminal signature 495 513 5.3E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS07545 197448a564205d3e10331d274d845239 535 PRINTS PR00344 Bacterial sensor protein C-terminal signature 482 492 5.3E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS07545 197448a564205d3e10331d274d845239 535 PRINTS PR00344 Bacterial sensor protein C-terminal signature 519 532 5.3E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS07545 197448a564205d3e10331d274d845239 535 Gene3D G3DSA:1.10.287.130 317 384 4.2E-5 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS07545 197448a564205d3e10331d274d845239 535 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 432 531 1.5E-15 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS07545 197448a564205d3e10331d274d845239 535 SUPERFAMILY SSF47384 315 386 1.33E-8 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS07545 197448a564205d3e10331d274d845239 535 SMART SM00388 320 390 2.9E-4 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS07545 197448a564205d3e10331d274d845239 535 Pfam PF07695 7TM diverse intracellular signalling 98 273 1.1E-9 T 11-11-2016 IPR011623 7TM-DISM receptor, extracellular domain, type 1 SHALO_RS07545 197448a564205d3e10331d274d845239 535 Gene3D G3DSA:3.30.565.10 395 531 2.7E-25 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS07545 197448a564205d3e10331d274d845239 535 SUPERFAMILY SSF55874 389 531 1.83E-22 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS07545 197448a564205d3e10331d274d845239 535 SMART SM00387 429 535 9.4E-19 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS11845 b5b9adfc00b67110400a84b1a07e3158 432 Pfam PF13635 Domain of unknown function (DUF4143) 222 363 1.3E-6 T 11-11-2016 IPR025420 Domain of unknown function DUF4143 SHALO_RS11845 b5b9adfc00b67110400a84b1a07e3158 432 SUPERFAMILY SSF52540 16 168 5.01E-18 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS11845 b5b9adfc00b67110400a84b1a07e3158 432 Gene3D G3DSA:3.40.50.300 27 151 1.2E-9 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS11845 b5b9adfc00b67110400a84b1a07e3158 432 Pfam PF13173 AAA domain 32 166 7.9E-36 T 11-11-2016 SHALO_RS08295 bfe8efc7a3a274b506963437ef1cffe2 553 Gene3D G3DSA:3.40.50.300 396 478 7.2E-7 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS08295 bfe8efc7a3a274b506963437ef1cffe2 553 ProSitePatterns PS00674 AAA-protein family signature. 291 309 - T 11-11-2016 IPR003960 ATPase, AAA-type, conserved site GO:0005524 SHALO_RS08295 bfe8efc7a3a274b506963437ef1cffe2 553 SUPERFAMILY SSF52540 150 388 7.22E-65 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS08295 bfe8efc7a3a274b506963437ef1cffe2 553 Gene3D G3DSA:1.10.8.60 332 395 1.5E-15 T 11-11-2016 SHALO_RS08295 bfe8efc7a3a274b506963437ef1cffe2 553 Pfam PF01434 Peptidase family M41 386 500 9.4E-15 T 11-11-2016 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 SHALO_RS08295 bfe8efc7a3a274b506963437ef1cffe2 553 Gene3D G3DSA:3.40.50.300 151 331 2.5E-62 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS08295 bfe8efc7a3a274b506963437ef1cffe2 553 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 191 320 3.8E-44 T 11-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SHALO_RS08295 bfe8efc7a3a274b506963437ef1cffe2 553 SMART SM00382 187 323 1.3E-23 T 11-11-2016 IPR003593 AAA+ ATPase domain SHALO_RS08295 bfe8efc7a3a274b506963437ef1cffe2 553 SUPERFAMILY SSF140990 400 551 2.75E-29 T 11-11-2016 SHALO_RS07900 8f96551b1b9d4b07f64ef67c060966b3 403 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 42 55 - T 11-11-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 SHALO_RS07900 8f96551b1b9d4b07f64ef67c060966b3 403 SUPERFAMILY SSF53686 4 354 1.24E-97 T 11-11-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SHALO_RS07900 8f96551b1b9d4b07f64ef67c060966b3 403 Gene3D G3DSA:3.40.50.1100 70 323 4.2E-76 T 11-11-2016 SHALO_RS07900 8f96551b1b9d4b07f64ef67c060966b3 403 TIGRFAM TIGR01127 ilvA_1Cterm: threonine ammonia-lyase 21 400 3.3E-159 T 11-11-2016 IPR005789 Threonine dehydratase, catabolic GO:0004794|GO:0006567 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 SHALO_RS07900 8f96551b1b9d4b07f64ef67c060966b3 403 Gene3D G3DSA:3.30.70.260 325 384 3.4E-6 T 11-11-2016 SHALO_RS07900 8f96551b1b9d4b07f64ef67c060966b3 403 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 17 304 1.1E-79 T 11-11-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SHALO_RS14125 98ae23960c2e935cb958c25618d95e82 251 Gene3D G3DSA:3.40.109.10 3 247 1.8E-51 T 11-11-2016 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 SHALO_RS14125 98ae23960c2e935cb958c25618d95e82 251 SUPERFAMILY SSF55469 3 248 4.58E-48 T 11-11-2016 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 SHALO_RS14125 98ae23960c2e935cb958c25618d95e82 251 PIRSF PIRSF005426 1 249 4.8E-63 T 11-11-2016 IPR016446 Flavin oxidoreductase Frp family GO:0016491|GO:0055114 SHALO_RS14125 98ae23960c2e935cb958c25618d95e82 251 Pfam PF00881 Nitroreductase family 10 164 3.8E-20 T 11-11-2016 IPR029479 Nitroreductase Reactome: R-HSA-209968 SHALO_RS09810 104493e72372b880eb89939c2bfff4c3 227 SUPERFAMILY SSF52218 1 213 2.02E-39 T 11-11-2016 IPR029039 Flavoprotein-like domain SHALO_RS09810 104493e72372b880eb89939c2bfff4c3 227 Gene3D G3DSA:3.40.50.360 1 212 1.4E-44 T 11-11-2016 IPR029039 Flavoprotein-like domain SHALO_RS09810 104493e72372b880eb89939c2bfff4c3 227 Pfam PF03358 NADPH-dependent FMN reductase 1 113 1.3E-24 T 11-11-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 SHALO_RS14950 d76a4dd1442ec7c93eb7ba870ff774fa 367 Gene3D G3DSA:3.30.70.20 135 190 6.9E-21 T 11-11-2016 SHALO_RS14950 d76a4dd1442ec7c93eb7ba870ff774fa 367 Gene3D G3DSA:3.30.70.20 191 257 1.3E-41 T 11-11-2016 SHALO_RS14950 d76a4dd1442ec7c93eb7ba870ff774fa 367 Gene3D G3DSA:3.30.70.20 121 134 1.3E-41 T 11-11-2016 SHALO_RS14950 d76a4dd1442ec7c93eb7ba870ff774fa 367 Gene3D G3DSA:3.30.70.20 4 52 1.3E-41 T 11-11-2016 SHALO_RS14950 d76a4dd1442ec7c93eb7ba870ff774fa 367 TIGRFAM TIGR03478 DMSO_red_II_bet: DMSO reductase family type II enzyme, iron-sulfur subunit 3 323 1.7E-154 T 11-11-2016 IPR017839 DMSO reductase family, type II, iron-sulphur subunit GO:0009061|GO:0042597|GO:0051536 SHALO_RS14950 d76a4dd1442ec7c93eb7ba870ff774fa 367 SUPERFAMILY SSF54862 4 293 1.99E-81 T 11-11-2016 SHALO_RS14950 d76a4dd1442ec7c93eb7ba870ff774fa 367 Pfam PF13247 4Fe-4S dicluster domain 124 218 3.4E-33 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_RS01965 aa308346c542268946c5409762bf6316 229 Pfam PF08889 WbqC-like protein family 8 222 8.6E-77 T 11-11-2016 IPR014985 WbqC-like protein family SHALO_RS07380 980ec0cd07f2921e55ca2f17eff11b89 296 SUPERFAMILY SSF52540 9 211 2.65E-34 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS07380 980ec0cd07f2921e55ca2f17eff11b89 296 TIGRFAM TIGR00436 era: GTP-binding protein Era 8 275 7.0E-67 T 11-11-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 SHALO_RS07380 980ec0cd07f2921e55ca2f17eff11b89 296 Hamap MF_00367 GTPase Era [era]. 5 293 30.725 T 11-11-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 SHALO_RS07380 980ec0cd07f2921e55ca2f17eff11b89 296 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 157 1.5E-18 T 11-11-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SHALO_RS07380 980ec0cd07f2921e55ca2f17eff11b89 296 SUPERFAMILY SSF54814 180 293 2.06E-33 T 11-11-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 SHALO_RS07380 980ec0cd07f2921e55ca2f17eff11b89 296 Pfam PF07650 KH domain 206 281 9.0E-16 T 11-11-2016 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_RS07380 980ec0cd07f2921e55ca2f17eff11b89 296 Gene3D G3DSA:3.40.50.300 4 172 5.4E-36 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS07380 980ec0cd07f2921e55ca2f17eff11b89 296 Gene3D G3DSA:3.30.300.20 188 290 5.1E-32 T 11-11-2016 IPR015946 K homology domain-like, alpha/beta SHALO_RS07380 980ec0cd07f2921e55ca2f17eff11b89 296 Pfam PF01926 50S ribosome-binding GTPase 10 122 1.4E-20 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 SHALO_RS00700 eb2340acc58054240a4e01919745d4e3 722 SUPERFAMILY SSF51645 5 719 1.31E-259 T 11-11-2016 IPR011076 Malate synthase-like GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295 SHALO_RS00700 eb2340acc58054240a4e01919745d4e3 722 Gene3D G3DSA:2.170.170.11 136 264 9.6E-52 T 11-11-2016 IPR023310 Malate synthase G, beta sub-domain GO:0004474 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295 SHALO_RS00700 eb2340acc58054240a4e01919745d4e3 722 Gene3D G3DSA:2.170.170.11 298 334 9.6E-52 T 11-11-2016 IPR023310 Malate synthase G, beta sub-domain GO:0004474 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295 SHALO_RS00700 eb2340acc58054240a4e01919745d4e3 722 Gene3D G3DSA:3.20.20.360 266 296 8.2E-126 T 11-11-2016 SHALO_RS00700 eb2340acc58054240a4e01919745d4e3 722 Gene3D G3DSA:3.20.20.360 94 135 8.2E-126 T 11-11-2016 SHALO_RS00700 eb2340acc58054240a4e01919745d4e3 722 Gene3D G3DSA:3.20.20.360 335 584 8.2E-126 T 11-11-2016 SHALO_RS00700 eb2340acc58054240a4e01919745d4e3 722 Gene3D G3DSA:1.20.1220.12 588 720 5.0E-71 T 11-11-2016 SHALO_RS00700 eb2340acc58054240a4e01919745d4e3 722 Gene3D G3DSA:1.10.1860.10 4 88 6.3E-26 T 11-11-2016 SHALO_RS00700 eb2340acc58054240a4e01919745d4e3 722 Pfam PF01274 Malate synthase 18 695 1.6E-156 T 11-11-2016 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295 SHALO_RS00700 eb2340acc58054240a4e01919745d4e3 722 Hamap MF_00641 Malate synthase G [glcB]. 1 722 319.225 T 11-11-2016 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295 SHALO_RS10885 0a7465811edc7a849832059a8ec58094 236 Gene3D G3DSA:3.40.50.300 2 228 9.0E-72 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS10885 0a7465811edc7a849832059a8ec58094 236 Pfam PF00005 ABC transporter 24 172 3.4E-29 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_RS10885 0a7465811edc7a849832059a8ec58094 236 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHALO_RS10885 0a7465811edc7a849832059a8ec58094 236 SUPERFAMILY SSF52540 4 228 2.79E-75 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS10885 0a7465811edc7a849832059a8ec58094 236 SMART SM00382 33 221 1.7E-13 T 11-11-2016 IPR003593 AAA+ ATPase domain SHALO_RS12890 644e9f5f60db7a26fa1bacea3f1d8c87 157 TIGRFAM TIGR04274 hypoxanDNAglyco: DNA-deoxyinosine glycosylase 5 152 6.6E-41 T 11-11-2016 IPR026353 Hypoxanthine-DNA glycosylase SHALO_RS12890 644e9f5f60db7a26fa1bacea3f1d8c87 157 SUPERFAMILY SSF52141 4 155 4.97E-28 T 11-11-2016 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 SHALO_RS12890 644e9f5f60db7a26fa1bacea3f1d8c87 157 Pfam PF03167 Uracil DNA glycosylase superfamily 10 152 2.8E-12 T 11-11-2016 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 SHALO_RS12890 644e9f5f60db7a26fa1bacea3f1d8c87 157 Gene3D G3DSA:3.40.470.10 4 154 8.2E-39 T 11-11-2016 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 SHALO_RS06185 1c8293cf0f47179732a8f7e0fe992d1a 410 Pfam PF05167 Uncharacterised ACR (DUF711) 10 396 3.0E-108 T 11-11-2016 IPR007841 Uncharacterised protein family UPF0210 SHALO_RS06185 1c8293cf0f47179732a8f7e0fe992d1a 410 Gene3D G3DSA:3.20.70.20 7 406 3.7E-106 T 11-11-2016 SHALO_RS06185 1c8293cf0f47179732a8f7e0fe992d1a 410 SUPERFAMILY SSF51998 6 408 1.19E-91 T 11-11-2016 SHALO_RS00880 7e2a483fbc7c04572c9f490b6fc2a81c 268 Pfam PF00950 ABC 3 transport family 7 262 1.2E-73 T 11-11-2016 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 SHALO_RS00880 7e2a483fbc7c04572c9f490b6fc2a81c 268 SUPERFAMILY SSF81345 3 260 1.44E-34 T 11-11-2016 IPR029022 ABC transporter, BtuC-like SHALO_RS00880 7e2a483fbc7c04572c9f490b6fc2a81c 268 Gene3D G3DSA:1.10.3470.10 42 260 4.6E-7 T 11-11-2016 IPR029022 ABC transporter, BtuC-like SHALO_RS06705 704bd05a08002525e3d15617cef935bd 280 Hamap MF_00548 Zinc transporter ZupT [zupT]. 8 278 32.912 T 11-11-2016 IPR023498 Zinc transporter ZupT SHALO_RS06705 704bd05a08002525e3d15617cef935bd 280 Pfam PF02535 ZIP Zinc transporter 116 272 1.4E-27 T 11-11-2016 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 SHALO_RS13310 7e511fdfb047ec2c7a215376d6d916d2 299 Gene3D G3DSA:1.20.950.20 86 297 2.0E-51 T 11-11-2016 SHALO_RS13310 7e511fdfb047ec2c7a215376d6d916d2 299 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 91 294 1.4E-63 T 11-11-2016 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 SHALO_RS13310 7e511fdfb047ec2c7a215376d6d916d2 299 SUPERFAMILY SSF81342 88 298 1.57E-38 T 11-11-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 SHALO_RS13310 7e511fdfb047ec2c7a215376d6d916d2 299 Pfam PF01292 Prokaryotic cytochrome b561 94 275 9.5E-17 T 11-11-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 SHALO_RS10400 52ca2d116d1710a219b521ce1d7c0236 152 Gene3D G3DSA:3.40.630.30 2 103 7.3E-19 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase SHALO_RS10400 52ca2d116d1710a219b521ce1d7c0236 152 SUPERFAMILY SSF55729 5 146 7.83E-16 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase SHALO_RS13410 be926e368a60bc17fc6b255142bef356 255 Pfam PF13649 Methyltransferase domain 46 128 8.1E-15 T 11-11-2016 SHALO_RS13410 be926e368a60bc17fc6b255142bef356 255 Gene3D G3DSA:3.40.50.150 6 116 3.0E-24 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS13410 be926e368a60bc17fc6b255142bef356 255 SUPERFAMILY SSF53335 6 117 2.41E-27 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS07410 7d5582ddc103ed74809dda13a28f9d5a 81 SUPERFAMILY SSF55174 1 72 1.7E-17 T 11-11-2016 SHALO_RS07410 7d5582ddc103ed74809dda13a28f9d5a 81 Gene3D G3DSA:3.10.290.10 1 77 1.7E-19 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 SHALO_RS07410 7d5582ddc103ed74809dda13a28f9d5a 81 SMART SM00363 1 62 1.3E-7 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 SHALO_RS07410 7d5582ddc103ed74809dda13a28f9d5a 81 Pfam PF01479 S4 domain 1 47 2.3E-8 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 SHALO_RS07410 7d5582ddc103ed74809dda13a28f9d5a 81 PIRSF PIRSF038881 1 80 2.2E-24 T 11-11-2016 IPR025490 RNA-binding protein, HP1423 type SHALO_RS11865 6d31f491f00791f930f4d0327ff82df6 346 SUPERFAMILY SSF53850 24 330 2.17E-62 T 11-11-2016 SHALO_RS11865 6d31f491f00791f930f4d0327ff82df6 346 Pfam PF12849 PBP superfamily domain 19 296 1.3E-37 T 11-11-2016 IPR024370 PBP domain SHALO_RS11865 6d31f491f00791f930f4d0327ff82df6 346 Gene3D G3DSA:3.40.190.10 25 182 1.3E-29 T 11-11-2016 SHALO_RS04095 d7d136a104c2857acdd86ee978306cb3 977 SMART SM00534 687 877 9.1E-51 T 11-11-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 SHALO_RS04095 d7d136a104c2857acdd86ee978306cb3 977 Pfam PF05192 MutS domain III 310 616 2.8E-28 T 11-11-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 SHALO_RS04095 d7d136a104c2857acdd86ee978306cb3 977 Gene3D G3DSA:1.10.1420.10 304 503 1.9E-23 T 11-11-2016 SHALO_RS04095 d7d136a104c2857acdd86ee978306cb3 977 Gene3D G3DSA:3.40.1170.10 33 138 3.1E-18 T 11-11-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 SHALO_RS04095 d7d136a104c2857acdd86ee978306cb3 977 SUPERFAMILY SSF52540 630 878 5.57E-29 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS04095 d7d136a104c2857acdd86ee978306cb3 977 Pfam PF01624 MutS domain I 30 137 4.7E-11 T 11-11-2016 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 SHALO_RS04095 d7d136a104c2857acdd86ee978306cb3 977 Pfam PF00488 MutS domain V 691 879 4.9E-41 T 11-11-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 SHALO_RS04095 d7d136a104c2857acdd86ee978306cb3 977 Gene3D G3DSA:3.40.50.300 625 877 1.9E-46 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS04095 d7d136a104c2857acdd86ee978306cb3 977 Gene3D G3DSA:3.30.420.110 145 237 1.6E-5 T 11-11-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 SHALO_RS04095 d7d136a104c2857acdd86ee978306cb3 977 SUPERFAMILY SSF55271 30 135 4.32E-14 T 11-11-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 SHALO_RS04095 d7d136a104c2857acdd86ee978306cb3 977 PIRSF PIRSF037677 30 926 3.5E-75 T 11-11-2016 SHALO_RS04095 d7d136a104c2857acdd86ee978306cb3 977 SUPERFAMILY SSF48334 311 623 4.71E-34 T 11-11-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 SHALO_RS04095 d7d136a104c2857acdd86ee978306cb3 977 SUPERFAMILY SSF53150 243 319 9.68E-9 T 11-11-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 SHALO_RS04095 d7d136a104c2857acdd86ee978306cb3 977 SUPERFAMILY SSF53150 140 211 9.68E-9 T 11-11-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 SHALO_RS04095 d7d136a104c2857acdd86ee978306cb3 977 SMART SM00533 322 652 7.4E-34 T 11-11-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 SHALO_RS13170 159b24b763ddee9a11e5287605fae748 229 SUPERFAMILY SSF52172 11 178 1.17E-33 T 11-11-2016 IPR011006 CheY-like superfamily SHALO_RS13170 159b24b763ddee9a11e5287605fae748 229 Gene3D G3DSA:3.40.50.2300 12 158 6.3E-31 T 11-11-2016 SHALO_RS13170 159b24b763ddee9a11e5287605fae748 229 Gene3D G3DSA:1.10.10.10 159 227 1.4E-16 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS13170 159b24b763ddee9a11e5287605fae748 229 SUPERFAMILY SSF46894 156 226 1.63E-12 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SHALO_RS13170 159b24b763ddee9a11e5287605fae748 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 158 226 6.3E-15 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS13170 159b24b763ddee9a11e5287605fae748 229 SMART SM00448 13 124 6.3E-28 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS13170 159b24b763ddee9a11e5287605fae748 229 SMART SM00862 157 227 1.2E-14 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS13170 159b24b763ddee9a11e5287605fae748 229 Pfam PF00072 Response regulator receiver domain 15 124 7.3E-25 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS09145 36d1f2d2ab61875073ef9d13fc2126c2 339 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 4 339 40.279 T 11-11-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 SHALO_RS09145 36d1f2d2ab61875073ef9d13fc2126c2 339 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 7 339 1.7E-122 T 11-11-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 SHALO_RS09145 36d1f2d2ab61875073ef9d13fc2126c2 339 Gene3D G3DSA:3.40.1780.10 7 65 3.9E-77 T 11-11-2016 SHALO_RS09145 36d1f2d2ab61875073ef9d13fc2126c2 339 Gene3D G3DSA:3.40.1780.10 185 338 3.9E-77 T 11-11-2016 SHALO_RS09145 36d1f2d2ab61875073ef9d13fc2126c2 339 Gene3D G3DSA:2.40.10.240 67 135 2.8E-17 T 11-11-2016 SHALO_RS09145 36d1f2d2ab61875073ef9d13fc2126c2 339 Pfam PF02547 Queuosine biosynthesis protein 7 338 7.3E-112 T 11-11-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 SHALO_RS09145 36d1f2d2ab61875073ef9d13fc2126c2 339 SUPERFAMILY SSF111337 7 338 4.32E-114 T 11-11-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 SHALO_RS07920 ad70466a460ac06875cb2867e20a8d64 384 SUPERFAMILY SSF161098 172 365 2.49E-26 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHALO_RS07920 ad70466a460ac06875cb2867e20a8d64 384 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 75 137 1.5E-15 T 11-11-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 SHALO_RS07920 ad70466a460ac06875cb2867e20a8d64 384 Gene3D G3DSA:1.10.3720.10 224 380 2.3E-43 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHALO_RS07920 ad70466a460ac06875cb2867e20a8d64 384 Gene3D G3DSA:1.10.3720.10 74 142 2.3E-43 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHALO_RS07920 ad70466a460ac06875cb2867e20a8d64 384 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 206 380 1.2E-12 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHALO_RS07920 ad70466a460ac06875cb2867e20a8d64 384 SUPERFAMILY SSF161098 75 140 1.44E-13 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHALO_RS01600 e810c720dd28f11e111078e7d9a0050f 282 Pfam PF14827 Double sensory domain of two-component sensor kinase 36 269 7.7E-22 T 11-11-2016 IPR029150 Double Cache domain 3 SHALO_RS01600 e810c720dd28f11e111078e7d9a0050f 282 SUPERFAMILY SSF103190 51 183 1.06E-5 T 11-11-2016 IPR029151 Periplasmic sensor domain-like SHALO_RS01925 0794246843e58bfa8cc4f1b09a410f99 290 Gene3D G3DSA:3.40.50.300 22 263 4.7E-56 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS01925 0794246843e58bfa8cc4f1b09a410f99 290 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 26 232 6.7E-28 T 11-11-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain SHALO_RS01925 0794246843e58bfa8cc4f1b09a410f99 290 SUPERFAMILY SSF52540 23 282 4.93E-48 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS01925 0794246843e58bfa8cc4f1b09a410f99 290 PIRSF PIRSF003092 1 290 7.4E-70 T 11-11-2016 IPR025501 ATP binding protein MinD SHALO_RS08585 44935eb0f64756d9ee87b18daedfc7d0 498 Gene3D G3DSA:3.40.50.1100 134 204 4.0E-5 T 11-11-2016 SHALO_RS08585 44935eb0f64756d9ee87b18daedfc7d0 498 Gene3D G3DSA:3.90.1380.10 2 86 2.3E-18 T 11-11-2016 IPR029144 Threonine synthase, N-terminal SHALO_RS08585 44935eb0f64756d9ee87b18daedfc7d0 498 Pfam PF14821 Threonine synthase N terminus 2 78 1.1E-12 T 11-11-2016 IPR029144 Threonine synthase, N-terminal SHALO_RS08585 44935eb0f64756d9ee87b18daedfc7d0 498 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 90 409 1.7E-15 T 11-11-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SHALO_RS08585 44935eb0f64756d9ee87b18daedfc7d0 498 SUPERFAMILY SSF53686 9 477 1.6E-127 T 11-11-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SHALO_RS08585 44935eb0f64756d9ee87b18daedfc7d0 498 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 104 118 - T 11-11-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 SHALO_RS08585 44935eb0f64756d9ee87b18daedfc7d0 498 Gene3D G3DSA:3.40.50.1100 205 438 1.0E-74 T 11-11-2016 SHALO_RS08585 44935eb0f64756d9ee87b18daedfc7d0 498 TIGRFAM TIGR00260 thrC: threonine synthase 80 440 4.2E-82 T 11-11-2016 IPR004450 Threonine synthase-like SHALO_RS05035 b1e17cdcd683cca2f232a5ba75ba3f47 277 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 7 214 1.8E-55 T 11-11-2016 IPR003740 Uncharacterised membrane protein YitT SHALO_RS05035 b1e17cdcd683cca2f232a5ba75ba3f47 277 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 223 274 6.8E-14 T 11-11-2016 IPR019264 Domain of unknown function DUF2179 SHALO_RS05035 b1e17cdcd683cca2f232a5ba75ba3f47 277 PIRSF PIRSF006483 1 277 9.1E-72 T 11-11-2016 IPR003740 Uncharacterised membrane protein YitT SHALO_RS07175 451eba60374ca142361133d1e5dac6db 277 SUPERFAMILY SSF52518 14 240 7.52E-68 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold SHALO_RS07175 451eba60374ca142361133d1e5dac6db 277 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 51 198 7.8E-33 T 11-11-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 SHALO_RS07175 451eba60374ca142361133d1e5dac6db 277 Gene3D G3DSA:3.40.50.970 16 242 1.2E-71 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold SHALO_RS07595 6616183acf8f74c1c95f56dc67fabaaf 392 SUPERFAMILY SSF53383 71 387 1.11E-51 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase SHALO_RS07595 6616183acf8f74c1c95f56dc67fabaaf 392 Gene3D G3DSA:3.40.640.10 74 281 4.9E-48 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SHALO_RS07595 6616183acf8f74c1c95f56dc67fabaaf 392 Gene3D G3DSA:3.90.1150.10 293 389 6.6E-18 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SHALO_RS07595 6616183acf8f74c1c95f56dc67fabaaf 392 Pfam PF00155 Aminotransferase class I and II 79 377 4.5E-35 T 11-11-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SHALO_RS08330 194913fe96593bfd5618b665c5809803 111 Gene3D G3DSA:3.10.450.50 17 107 3.4E-6 T 11-11-2016 IPR032710 NTF2-like domain SHALO_RS08330 194913fe96593bfd5618b665c5809803 111 SUPERFAMILY SSF54427 10 109 5.99E-11 T 11-11-2016 IPR032710 NTF2-like domain SHALO_RS01065 4b28a22eaae68629d4a06d4fba75b723 227 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 2 72 2.6E-8 T 11-11-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 SHALO_RS01065 4b28a22eaae68629d4a06d4fba75b723 227 SUPERFAMILY SSF75217 62 221 9.16E-39 T 11-11-2016 IPR029028 Alpha/beta knot methyltransferases SHALO_RS01065 4b28a22eaae68629d4a06d4fba75b723 227 Gene3D G3DSA:3.40.1280.10 80 224 4.6E-41 T 11-11-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SHALO_RS01065 4b28a22eaae68629d4a06d4fba75b723 227 Pfam PF00588 SpoU rRNA Methylase family 84 221 1.5E-33 T 11-11-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 SHALO_RS01065 4b28a22eaae68629d4a06d4fba75b723 227 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 2 225 3.1E-53 T 11-11-2016 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 SHALO_RS01065 4b28a22eaae68629d4a06d4fba75b723 227 SUPERFAMILY SSF55315 1 70 1.69E-8 T 11-11-2016 IPR029064 50S ribosomal protein L30e-like SHALO_RS01065 4b28a22eaae68629d4a06d4fba75b723 227 SMART SM00967 2 74 3.3E-8 T 11-11-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 SHALO_RS01065 4b28a22eaae68629d4a06d4fba75b723 227 Gene3D G3DSA:3.30.1330.30 2 69 2.0E-8 T 11-11-2016 IPR029064 50S ribosomal protein L30e-like SHALO_RS14640 19ecbd8da887e7837d3e189db5cff865 385 SUPERFAMILY SSF53756 3 373 2.09E-48 T 11-11-2016 SHALO_RS14640 19ecbd8da887e7837d3e189db5cff865 385 Gene3D G3DSA:3.40.50.2000 201 322 1.2E-12 T 11-11-2016 SHALO_RS14640 19ecbd8da887e7837d3e189db5cff865 385 Pfam PF00534 Glycosyl transferases group 1 196 353 3.3E-22 T 11-11-2016 IPR001296 Glycosyl transferase, family 1 SHALO_RS11160 685d71e754939ab6b105b5b25c9e41a5 594 SUPERFAMILY SSF52518 1 180 8.83E-38 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold SHALO_RS11160 685d71e754939ab6b105b5b25c9e41a5 594 Gene3D G3DSA:3.40.50.1220 196 355 1.6E-41 T 11-11-2016 IPR029035 DHS-like NAD/FAD-binding domain SHALO_RS11160 685d71e754939ab6b105b5b25c9e41a5 594 SUPERFAMILY SSF52518 368 586 1.45E-45 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold SHALO_RS11160 685d71e754939ab6b105b5b25c9e41a5 594 SUPERFAMILY SSF52467 161 365 4.91E-36 T 11-11-2016 IPR029035 DHS-like NAD/FAD-binding domain SHALO_RS11160 685d71e754939ab6b105b5b25c9e41a5 594 Gene3D G3DSA:3.40.50.970 1 178 3.8E-44 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold SHALO_RS11160 685d71e754939ab6b105b5b25c9e41a5 594 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 177 1.3E-39 T 11-11-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 SHALO_RS11160 685d71e754939ab6b105b5b25c9e41a5 594 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 197 333 4.2E-31 T 11-11-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 SHALO_RS11160 685d71e754939ab6b105b5b25c9e41a5 594 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 395 547 5.6E-32 T 11-11-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 SHALO_RS11160 685d71e754939ab6b105b5b25c9e41a5 594 Gene3D G3DSA:3.40.50.970 356 555 1.4E-51 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold SHALO_RS13745 6ca81e54d3e015d84a39c2a09c40c816 1200 Gene3D G3DSA:3.30.1490.20 129 201 6.6E-22 T 11-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SHALO_RS13745 6ca81e54d3e015d84a39c2a09c40c816 1200 Gene3D G3DSA:3.40.50.20 1 128 2.0E-47 T 11-11-2016 IPR016185 Pre-ATP-grasp domain SHALO_RS13745 6ca81e54d3e015d84a39c2a09c40c816 1200 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 449 765 2.0E-89 T 11-11-2016 IPR003778 Carboxyltransferase domain, subdomain A and B SHALO_RS13745 6ca81e54d3e015d84a39c2a09c40c816 1200 Gene3D G3DSA:3.30.470.20 202 440 1.6E-85 T 11-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SHALO_RS13745 6ca81e54d3e015d84a39c2a09c40c816 1200 SUPERFAMILY SSF51246 330 441 5.23E-34 T 11-11-2016 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780|Reactome: R-HSA-3371599 SHALO_RS13745 6ca81e54d3e015d84a39c2a09c40c816 1200 TIGRFAM TIGR02712 urea_carbox: urea carboxylase 2 1196 0.0 T 11-11-2016 IPR014084 Urea carboxylase KEGG: 00220+3.5.1.54+6.3.4.6|KEGG: 00791+3.5.1.54+6.3.4.6|MetaCyc: PWY-5169|MetaCyc: PWY-5703 SHALO_RS13745 6ca81e54d3e015d84a39c2a09c40c816 1200 SUPERFAMILY SSF52440 1 112 7.91E-46 T 11-11-2016 IPR016185 Pre-ATP-grasp domain SHALO_RS13745 6ca81e54d3e015d84a39c2a09c40c816 1200 Gene3D G3DSA:3.30.1360.40 797 874 8.8E-24 T 11-11-2016 IPR024946 Arginine repressor C-terminal-like domain SHALO_RS13745 6ca81e54d3e015d84a39c2a09c40c816 1200 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 11-11-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SHALO_RS13745 6ca81e54d3e015d84a39c2a09c40c816 1200 Pfam PF02682 Allophanate hydrolase subunit 1 797 1018 4.4E-48 T 11-11-2016 IPR003833 Carboxyltransferase domain, subdomain C and D SHALO_RS13745 6ca81e54d3e015d84a39c2a09c40c816 1200 SUPERFAMILY SSF56059 83 354 1.01E-61 T 11-11-2016 SHALO_RS13745 6ca81e54d3e015d84a39c2a09c40c816 1200 SUPERFAMILY SSF50891 913 1045 2.2E-26 T 11-11-2016 IPR029000 Cyclophilin-like domain SHALO_RS13745 6ca81e54d3e015d84a39c2a09c40c816 1200 Pfam PF00364 Biotin-requiring enzyme 1136 1196 6.2E-18 T 11-11-2016 IPR000089 Biotin/lipoyl attachment SHALO_RS13745 6ca81e54d3e015d84a39c2a09c40c816 1200 Gene3D G3DSA:2.40.50.100 1128 1196 1.8E-23 T 11-11-2016 SHALO_RS13745 6ca81e54d3e015d84a39c2a09c40c816 1200 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 3.2E-44 T 11-11-2016 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 SHALO_RS13745 6ca81e54d3e015d84a39c2a09c40c816 1200 SUPERFAMILY SSF160467 797 889 3.79E-17 T 11-11-2016 SHALO_RS13745 6ca81e54d3e015d84a39c2a09c40c816 1200 SUPERFAMILY SSF51230 1124 1196 1.7E-19 T 11-11-2016 IPR011053 Single hybrid motif SHALO_RS13745 6ca81e54d3e015d84a39c2a09c40c816 1200 SMART SM00796 796 1029 2.3E-113 T 11-11-2016 IPR003833 Carboxyltransferase domain, subdomain C and D SHALO_RS13745 6ca81e54d3e015d84a39c2a09c40c816 1200 SMART SM00878 336 440 2.7E-46 T 11-11-2016 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 SHALO_RS13745 6ca81e54d3e015d84a39c2a09c40c816 1200 Pfam PF02785 Biotin carboxylase C-terminal domain 336 440 1.1E-33 T 11-11-2016 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 SHALO_RS13745 6ca81e54d3e015d84a39c2a09c40c816 1200 Gene3D G3DSA:2.40.100.10 913 1052 2.7E-46 T 11-11-2016 IPR029000 Cyclophilin-like domain SHALO_RS13745 6ca81e54d3e015d84a39c2a09c40c816 1200 Gene3D G3DSA:2.40.100.10 624 757 9.9E-34 T 11-11-2016 IPR029000 Cyclophilin-like domain SHALO_RS13745 6ca81e54d3e015d84a39c2a09c40c816 1200 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 319 3.8E-61 T 11-11-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SHALO_RS13745 6ca81e54d3e015d84a39c2a09c40c816 1200 Pfam PF02626 Allophanate hydrolase subunit 2 472 743 5.5E-85 T 11-11-2016 IPR003778 Carboxyltransferase domain, subdomain A and B SHALO_RS13745 6ca81e54d3e015d84a39c2a09c40c816 1200 SMART SM00797 471 760 1.5E-157 T 11-11-2016 IPR003778 Carboxyltransferase domain, subdomain A and B SHALO_RS13745 6ca81e54d3e015d84a39c2a09c40c816 1200 SUPERFAMILY SSF50891 624 749 2.16E-32 T 11-11-2016 IPR029000 Cyclophilin-like domain SHALO_RS13745 6ca81e54d3e015d84a39c2a09c40c816 1200 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 152 166 - T 11-11-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SHALO_RS11905 bd9a099cd22aeafcdafa713a4ae93b31 211 SUPERFAMILY SSF48695 17 174 4.77E-21 T 11-11-2016 IPR011031 Multihaem cytochrome SHALO_RS11905 bd9a099cd22aeafcdafa713a4ae93b31 211 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 12 175 5.1E-37 T 11-11-2016 IPR005126 NapC/NirT cytochrome c, N-terminal SHALO_RS11905 bd9a099cd22aeafcdafa713a4ae93b31 211 Gene3D G3DSA:1.10.3820.10 8 174 2.9E-20 T 11-11-2016 SHALO_RS00070 f809018f01b73624507c5870fa6cff9c 299 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 15 281 1.0E-93 T 11-11-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 SHALO_RS00070 f809018f01b73624507c5870fa6cff9c 299 Pfam PF05681 Fumarate hydratase (Fumerase) 17 279 7.6E-75 T 11-11-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 SHALO_RS02145 a1e691e7afaab124fe4a598f13332736 210 Pfam PF00239 Resolvase, N terminal domain 4 147 2.0E-34 T 11-11-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 SHALO_RS02145 a1e691e7afaab124fe4a598f13332736 210 ProSitePatterns PS00397 Site-specific recombinases active site. 7 15 - T 11-11-2016 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 SHALO_RS02145 a1e691e7afaab124fe4a598f13332736 210 SUPERFAMILY SSF53041 4 148 1.57E-29 T 11-11-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 SHALO_RS02145 a1e691e7afaab124fe4a598f13332736 210 SMART SM00857 4 149 5.1E-38 T 11-11-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 SHALO_RS02145 a1e691e7afaab124fe4a598f13332736 210 Gene3D G3DSA:3.40.50.1390 4 133 4.6E-25 T 11-11-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 SHALO_RS01795 a628e4f2248e6769bba4e98891166041 244 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 57 68 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_RS01795 a628e4f2248e6769bba4e98891166041 244 Gene3D G3DSA:1.10.1060.10 37 64 5.8E-7 T 11-11-2016 SHALO_RS01795 a628e4f2248e6769bba4e98891166041 244 SUPERFAMILY SSF54862 142 222 2.16E-17 T 11-11-2016 SHALO_RS01795 a628e4f2248e6769bba4e98891166041 244 SUPERFAMILY SSF54862 48 115 2.16E-17 T 11-11-2016 SHALO_RS01795 a628e4f2248e6769bba4e98891166041 244 Gene3D G3DSA:3.30.70.20 174 234 5.0E-7 T 11-11-2016 SHALO_RS01795 a628e4f2248e6769bba4e98891166041 244 Pfam PF12838 4Fe-4S dicluster domain 57 111 1.1E-10 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_RS01795 a628e4f2248e6769bba4e98891166041 244 Gene3D G3DSA:3.30.70.20 65 99 1.4E-10 T 11-11-2016 SHALO_RS01795 a628e4f2248e6769bba4e98891166041 244 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 210 221 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_RS01795 a628e4f2248e6769bba4e98891166041 244 Gene3D G3DSA:3.30.70.20 100 118 3.7E-9 T 11-11-2016 SHALO_RS04405 96422e66bed99fa66c3583c9d828349a 138 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 27 126 9.7E-29 T 11-11-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 SHALO_RS04405 96422e66bed99fa66c3583c9d828349a 138 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 12 130 19.827 T 11-11-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 SHALO_RS04405 96422e66bed99fa66c3583c9d828349a 138 SUPERFAMILY SSF55486 19 134 1.14E-33 T 11-11-2016 SHALO_RS04405 96422e66bed99fa66c3583c9d828349a 138 Gene3D G3DSA:3.40.390.30 20 136 5.2E-38 T 11-11-2016 IPR023091 Metalloprotease catalytic domain, predicted GO:0004222 SHALO_RS04405 96422e66bed99fa66c3583c9d828349a 138 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 98 108 - T 11-11-2016 IPR020549 Endoribonuclease YbeY, conserved site SHALO_RS04405 96422e66bed99fa66c3583c9d828349a 138 Pfam PF02130 Uncharacterized protein family UPF0054 14 124 4.9E-33 T 11-11-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 SHALO_RS11795 a185053cea02eeeeebe51af4d8bbdbd7 567 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 459 565 1.3E-11 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS11795 a185053cea02eeeeebe51af4d8bbdbd7 567 Gene3D G3DSA:3.30.565.10 419 565 3.9E-25 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS11795 a185053cea02eeeeebe51af4d8bbdbd7 567 SUPERFAMILY SSF55874 418 565 2.23E-24 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS11795 a185053cea02eeeeebe51af4d8bbdbd7 567 SUPERFAMILY SSF47384 341 414 2.94E-6 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS11795 a185053cea02eeeeebe51af4d8bbdbd7 567 Pfam PF05228 CHASE4 domain 61 196 3.0E-11 T 11-11-2016 IPR007892 CHASE4 SHALO_RS11795 a185053cea02eeeeebe51af4d8bbdbd7 567 SMART SM00387 456 567 9.0E-12 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS11795 a185053cea02eeeeebe51af4d8bbdbd7 567 PRINTS PR00344 Bacterial sensor protein C-terminal signature 497 511 3.4E-7 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS11795 a185053cea02eeeeebe51af4d8bbdbd7 567 PRINTS PR00344 Bacterial sensor protein C-terminal signature 515 525 3.4E-7 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS11795 a185053cea02eeeeebe51af4d8bbdbd7 567 PRINTS PR00344 Bacterial sensor protein C-terminal signature 528 546 3.4E-7 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS11795 a185053cea02eeeeebe51af4d8bbdbd7 567 Gene3D G3DSA:1.10.287.130 345 410 4.7E-4 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS10490 e6f14b72172617ec497183c951d27446 449 Pfam PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase 7 170 2.0E-48 T 11-11-2016 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GO:0051191 SHALO_RS10490 e6f14b72172617ec497183c951d27446 449 Pfam PF01874 ATP:dephospho-CoA triphosphoribosyl transferase 181 442 3.4E-68 T 11-11-2016 IPR002736 Triphosphoribosyl-dephospho-CoA protein GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 SHALO_RS10490 e6f14b72172617ec497183c951d27446 449 TIGRFAM TIGR03125 citrate_citG: triphosphoribosyl-dephospho-CoA synthase CitG 177 444 3.1E-88 T 11-11-2016 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 SHALO_RS10490 e6f14b72172617ec497183c951d27446 449 TIGRFAM TIGR03124 citrate_citX: holo-ACP synthase CitX 7 170 1.0E-45 T 11-11-2016 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GO:0051191 SHALO_RS10490 e6f14b72172617ec497183c951d27446 449 Hamap MF_00397 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase [citG]. 157 449 120.013 T 11-11-2016 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 SHALO_RS09095 bf2e5a8db9d09bd65d0be2c4c680476a 250 PRINTS PR00625 DnaJ domain signature 188 206 3.0E-10 T 11-11-2016 IPR001623 DnaJ domain SHALO_RS09095 bf2e5a8db9d09bd65d0be2c4c680476a 250 PRINTS PR00625 DnaJ domain signature 230 250 3.0E-10 T 11-11-2016 IPR001623 DnaJ domain SHALO_RS09095 bf2e5a8db9d09bd65d0be2c4c680476a 250 PRINTS PR00625 DnaJ domain signature 206 221 3.0E-10 T 11-11-2016 IPR001623 DnaJ domain SHALO_RS09095 bf2e5a8db9d09bd65d0be2c4c680476a 250 Gene3D G3DSA:1.10.3680.10 39 188 2.2E-15 T 11-11-2016 IPR029024 TerB-like SHALO_RS09095 bf2e5a8db9d09bd65d0be2c4c680476a 250 Pfam PF00226 DnaJ domain 186 249 2.0E-12 T 11-11-2016 IPR001623 DnaJ domain SHALO_RS09095 bf2e5a8db9d09bd65d0be2c4c680476a 250 Pfam PF05099 Tellurite resistance protein TerB 47 165 1.2E-10 T 11-11-2016 IPR007791 Co-chaperone DjlA, N-terminal SHALO_RS09095 bf2e5a8db9d09bd65d0be2c4c680476a 250 Gene3D G3DSA:1.10.287.110 189 249 2.4E-14 T 11-11-2016 IPR001623 DnaJ domain SHALO_RS09095 bf2e5a8db9d09bd65d0be2c4c680476a 250 SUPERFAMILY SSF46565 126 248 1.71E-18 T 11-11-2016 IPR001623 DnaJ domain SHALO_RS09095 bf2e5a8db9d09bd65d0be2c4c680476a 250 SMART SM00271 185 250 7.8E-13 T 11-11-2016 IPR001623 DnaJ domain SHALO_RS02485 369e8932c01d74fdbec16ceb1c75f125 295 SUPERFAMILY SSF103481 35 138 1.83E-13 T 11-11-2016 SHALO_RS02485 369e8932c01d74fdbec16ceb1c75f125 295 Pfam PF00892 EamA-like transporter family 4 134 7.5E-22 T 11-11-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SHALO_RS02485 369e8932c01d74fdbec16ceb1c75f125 295 Pfam PF00892 EamA-like transporter family 147 285 1.1E-18 T 11-11-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SHALO_RS02485 369e8932c01d74fdbec16ceb1c75f125 295 SUPERFAMILY SSF103481 183 290 9.55E-12 T 11-11-2016 SHALO_RS09515 27920fa81de06a3aa636c94e5f717eb6 215 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 42 49 - T 11-11-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 SHALO_RS09515 27920fa81de06a3aa636c94e5f717eb6 215 Gene3D G3DSA:3.40.1050.10 3 210 1.7E-59 T 11-11-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 SHALO_RS09515 27920fa81de06a3aa636c94e5f717eb6 215 SUPERFAMILY SSF53056 4 210 3.14E-55 T 11-11-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 SHALO_RS09515 27920fa81de06a3aa636c94e5f717eb6 215 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 87 107 - T 11-11-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 SHALO_RS09515 27920fa81de06a3aa636c94e5f717eb6 215 SMART SM00947 30 201 1.7E-56 T 11-11-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 SHALO_RS09515 27920fa81de06a3aa636c94e5f717eb6 215 Pfam PF00484 Carbonic anhydrase 38 197 3.0E-44 T 11-11-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 SHALO_RS14895 2048779d80bee47f02de8269498c6c21 336 SUPERFAMILY SSF56931 95 335 1.31E-81 T 11-11-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 SHALO_RS14895 2048779d80bee47f02de8269498c6c21 336 Pfam PF02253 Phospholipase A1 98 334 2.8E-88 T 11-11-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 SHALO_RS14895 2048779d80bee47f02de8269498c6c21 336 Gene3D G3DSA:2.40.230.10 94 336 2.5E-84 T 11-11-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 SHALO_RS14895 2048779d80bee47f02de8269498c6c21 336 PRINTS PR01486 Bacterial phospholipase A1 protein signature 307 327 4.2E-36 T 11-11-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 SHALO_RS14895 2048779d80bee47f02de8269498c6c21 336 PRINTS PR01486 Bacterial phospholipase A1 protein signature 249 267 4.2E-36 T 11-11-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 SHALO_RS14895 2048779d80bee47f02de8269498c6c21 336 PRINTS PR01486 Bacterial phospholipase A1 protein signature 128 145 4.2E-36 T 11-11-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 SHALO_RS14895 2048779d80bee47f02de8269498c6c21 336 PRINTS PR01486 Bacterial phospholipase A1 protein signature 214 232 4.2E-36 T 11-11-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 SHALO_RS14895 2048779d80bee47f02de8269498c6c21 336 PRINTS PR01486 Bacterial phospholipase A1 protein signature 150 166 4.2E-36 T 11-11-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 SHALO_RS14895 2048779d80bee47f02de8269498c6c21 336 PRINTS PR01486 Bacterial phospholipase A1 protein signature 284 301 4.2E-36 T 11-11-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 SHALO_RS14895 2048779d80bee47f02de8269498c6c21 336 PRINTS PR01486 Bacterial phospholipase A1 protein signature 171 190 4.2E-36 T 11-11-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 SHALO_RS14895 2048779d80bee47f02de8269498c6c21 336 Gene3D G3DSA:1.25.40.10 14 51 9.6E-6 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SHALO_RS07710 f3d6838255a4dc2e5f35d715aa217357 66 Pfam PF14375 Cysteine-rich CWC 9 57 4.6E-14 T 11-11-2016 IPR032720 Cysteine-rich CWC SHALO_RS04535 a35f668c9914ab7e38ac4a1a08162a19 537 SMART SM00283 276 537 2.9E-39 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SHALO_RS04535 a35f668c9914ab7e38ac4a1a08162a19 537 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 343 536 3.9E-41 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SHALO_RS04535 a35f668c9914ab7e38ac4a1a08162a19 537 Pfam PF12729 Four helix bundle sensory module for signal transduction 3 173 1.2E-16 T 11-11-2016 IPR024478 4HB MCP domain SHALO_RS04535 a35f668c9914ab7e38ac4a1a08162a19 537 SUPERFAMILY SSF58104 229 537 3.58E-58 T 11-11-2016 SHALO_RS04535 a35f668c9914ab7e38ac4a1a08162a19 537 Gene3D G3DSA:1.10.287.950 300 526 2.0E-45 T 11-11-2016 SHALO_RS01080 241642302483d2a775c9af15b1ba2202 403 Gene3D G3DSA:3.40.640.10 47 267 1.1E-57 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SHALO_RS01080 241642302483d2a775c9af15b1ba2202 403 Pfam PF00155 Aminotransferase class I and II 34 391 7.3E-64 T 11-11-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SHALO_RS01080 241642302483d2a775c9af15b1ba2202 403 SUPERFAMILY SSF53383 7 400 5.56E-106 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase SHALO_RS01080 241642302483d2a775c9af15b1ba2202 403 Gene3D G3DSA:3.90.1150.10 268 400 2.1E-44 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SHALO_RS10545 84d70495091622f87fc191f23c2a612a 326 PIRSF PIRSF017082 1 326 3.8E-81 T 11-11-2016 IPR005064 Bordetella uptake gene GO:0030288 SHALO_RS10545 84d70495091622f87fc191f23c2a612a 326 SUPERFAMILY SSF53850 94 231 4.81E-8 T 11-11-2016 SHALO_RS10545 84d70495091622f87fc191f23c2a612a 326 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 46 324 2.2E-23 T 11-11-2016 IPR005064 Bordetella uptake gene GO:0030288 SHALO_RS07080 9a25befb97378de34aff23843d503c29 137 Gene3D G3DSA:1.10.1220.10 5 49 2.8E-17 T 11-11-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 SHALO_RS07080 9a25befb97378de34aff23843d503c29 137 Pfam PF08753 NikR C terminal nickel binding domain 56 130 2.1E-29 T 11-11-2016 IPR014864 Transcription factor, NikR, nickel binding C-terminal SHALO_RS07080 9a25befb97378de34aff23843d503c29 137 Hamap MF_00476 Putative nickel-responsive regulator [nikR]. 4 134 26.675 T 11-11-2016 IPR022988 Nickel-responsive transcriptional regulator NikR GO:0003677|GO:0006355|GO:0010045|GO:0016151 SHALO_RS07080 9a25befb97378de34aff23843d503c29 137 Pfam PF01402 Ribbon-helix-helix protein, copG family 6 43 6.1E-10 T 11-11-2016 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 SHALO_RS07080 9a25befb97378de34aff23843d503c29 137 SUPERFAMILY SSF55021 54 131 2.98E-23 T 11-11-2016 SHALO_RS07080 9a25befb97378de34aff23843d503c29 137 SUPERFAMILY SSF47598 3 50 3.04E-12 T 11-11-2016 IPR010985 Ribbon-helix-helix GO:0006355 SHALO_RS07080 9a25befb97378de34aff23843d503c29 137 Gene3D G3DSA:3.30.70.1150 53 133 3.1E-31 T 11-11-2016 SHALO_RS13585 e17658a886483545a6080a9e62d93bf2 409 Gene3D G3DSA:1.10.287.130 204 261 7.9E-9 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS13585 e17658a886483545a6080a9e62d93bf2 409 Pfam PF00672 HAMP domain 144 201 2.0E-6 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SHALO_RS13585 e17658a886483545a6080a9e62d93bf2 409 SUPERFAMILY SSF158472 161 207 3.53E-5 T 11-11-2016 SHALO_RS13585 e17658a886483545a6080a9e62d93bf2 409 Gene3D G3DSA:3.30.565.10 271 408 4.9E-10 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS13585 e17658a886483545a6080a9e62d93bf2 409 SUPERFAMILY SSF47384 194 268 7.46E-7 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS13585 e17658a886483545a6080a9e62d93bf2 409 SMART SM00388 211 269 3.9E-5 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS13585 e17658a886483545a6080a9e62d93bf2 409 SUPERFAMILY SSF55874 280 405 1.9E-12 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS07640 f20ab686be4bd1b44b1aa767b9cbda3d 255 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHALO_RS07640 f20ab686be4bd1b44b1aa767b9cbda3d 255 Gene3D G3DSA:3.40.50.300 3 229 3.1E-58 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS07640 f20ab686be4bd1b44b1aa767b9cbda3d 255 Pfam PF00005 ABC transporter 19 168 8.6E-29 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_RS07640 f20ab686be4bd1b44b1aa767b9cbda3d 255 SUPERFAMILY SSF52540 4 230 1.23E-56 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS07640 f20ab686be4bd1b44b1aa767b9cbda3d 255 SMART SM00382 28 216 1.2E-12 T 11-11-2016 IPR003593 AAA+ ATPase domain SHALO_RS01140 43e01b144638069ed3b8d5db7fa6e57c 304 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 8 304 1.4E-130 T 11-11-2016 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108 SHALO_RS01140 43e01b144638069ed3b8d5db7fa6e57c 304 Gene3D G3DSA:3.30.470.10 5 128 1.2E-34 T 11-11-2016 SHALO_RS01140 43e01b144638069ed3b8d5db7fa6e57c 304 Gene3D G3DSA:3.20.10.10 132 293 8.9E-57 T 11-11-2016 SHALO_RS01140 43e01b144638069ed3b8d5db7fa6e57c 304 Pfam PF01063 Amino-transferase class IV 33 265 1.1E-42 T 11-11-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 SHALO_RS01140 43e01b144638069ed3b8d5db7fa6e57c 304 SUPERFAMILY SSF56752 3 300 3.4E-95 T 11-11-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 SHALO_RS09450 d4f32da95702d42c78af2d511611e09d 372 Gene3D G3DSA:3.40.50.2300 141 312 2.4E-40 T 11-11-2016 SHALO_RS09450 d4f32da95702d42c78af2d511611e09d 372 Pfam PF13458 Periplasmic binding protein 22 362 9.7E-54 T 11-11-2016 IPR028081 Leucine-binding protein domain SHALO_RS09450 d4f32da95702d42c78af2d511611e09d 372 Gene3D G3DSA:3.40.50.2300 54 140 3.6E-10 T 11-11-2016 SHALO_RS09450 d4f32da95702d42c78af2d511611e09d 372 SUPERFAMILY SSF53822 21 366 1.09E-76 T 11-11-2016 IPR028082 Periplasmic binding protein-like I SHALO_RS00495 68378ba6be6ae53acd1ba3f2c32cdb1a 701 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 121 695 9.9E-128 T 11-11-2016 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 SHALO_RS00495 68378ba6be6ae53acd1ba3f2c32cdb1a 701 Gene3D G3DSA:3.20.70.20 321 695 8.2E-185 T 11-11-2016 SHALO_RS00495 68378ba6be6ae53acd1ba3f2c32cdb1a 701 Gene3D G3DSA:3.20.70.20 127 275 8.2E-185 T 11-11-2016 SHALO_RS00495 68378ba6be6ae53acd1ba3f2c32cdb1a 701 SUPERFAMILY SSF51998 123 691 1.77E-140 T 11-11-2016 SHALO_RS00495 68378ba6be6ae53acd1ba3f2c32cdb1a 701 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 122 693 1.3E-165 T 11-11-2016 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 SHALO_RS00495 68378ba6be6ae53acd1ba3f2c32cdb1a 701 Pfam PF03477 ATP cone domain 4 86 1.0E-17 T 11-11-2016 IPR005144 ATP-cone domain Reactome: R-HSA-499943 SHALO_RS08920 2b0546e65126b905f0a72c0a6ba304ea 265 SUPERFAMILY SSF52540 31 235 1.8E-19 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS08920 2b0546e65126b905f0a72c0a6ba304ea 265 Pfam PF13401 AAA domain 44 154 8.1E-13 T 11-11-2016 IPR003593 AAA+ ATPase domain SHALO_RS08920 2b0546e65126b905f0a72c0a6ba304ea 265 SMART SM00382 41 178 2.8E-6 T 11-11-2016 IPR003593 AAA+ ATPase domain SHALO_RS08920 2b0546e65126b905f0a72c0a6ba304ea 265 Gene3D G3DSA:3.40.50.300 43 167 7.7E-12 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS10335 b9d7a678db98b756be88a4c7a9522692 286 Pfam PF04976 DMSO reductase anchor subunit (DmsC) 10 278 4.2E-14 T 11-11-2016 IPR007059 DMSO reductase anchor subunit (DmsC) GO:0016021|GO:0019645 SHALO_RS00625 5d8f5b31095460e858b2fb4421231cd7 149 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 44 52 2.3E-13 T 11-11-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 SHALO_RS00625 5d8f5b31095460e858b2fb4421231cd7 149 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 88 103 2.3E-13 T 11-11-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 SHALO_RS00625 5d8f5b31095460e858b2fb4421231cd7 149 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 123 139 2.3E-13 T 11-11-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 SHALO_RS00625 5d8f5b31095460e858b2fb4421231cd7 149 Pfam PF01252 Signal peptidase (SPase) II 14 141 3.7E-23 T 11-11-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 SHALO_RS00625 5d8f5b31095460e858b2fb4421231cd7 149 TIGRFAM TIGR00077 lspA: signal peptidase II 13 142 1.3E-28 T 11-11-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 SHALO_RS00625 5d8f5b31095460e858b2fb4421231cd7 149 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 3 148 12.521 T 11-11-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 SHALO_RS00625 5d8f5b31095460e858b2fb4421231cd7 149 ProSitePatterns PS00855 Signal peptidases II signature. 91 103 - T 11-11-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 SHALO_RS12095 f3c87d650746285acdb2f8ef4862f4c6 116 Pfam PF01196 Ribosomal protein L17 20 116 1.2E-32 T 11-11-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS12095 f3c87d650746285acdb2f8ef4862f4c6 116 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 25.423 T 11-11-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS12095 f3c87d650746285acdb2f8ef4862f4c6 116 Gene3D G3DSA:3.90.1030.10 1 116 1.6E-46 T 11-11-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS12095 f3c87d650746285acdb2f8ef4862f4c6 116 SUPERFAMILY SSF64263 1 116 3.27E-45 T 11-11-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS12095 f3c87d650746285acdb2f8ef4862f4c6 116 TIGRFAM TIGR00059 L17: ribosomal protein bL17 6 116 2.1E-45 T 11-11-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS04795 bc189f72a9a20fd7b55da0b4dd79d411 315 SUPERFAMILY SSF50978 28 314 6.0E-27 T 11-11-2016 IPR017986 WD40-repeat-containing domain GO:0005515 SHALO_RS04795 bc189f72a9a20fd7b55da0b4dd79d411 315 Gene3D G3DSA:2.130.10.10 26 314 1.9E-26 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 SHALO_RS04795 bc189f72a9a20fd7b55da0b4dd79d411 315 SMART SM00320 109 148 150.0 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 SHALO_RS04795 bc189f72a9a20fd7b55da0b4dd79d411 315 SMART SM00320 151 190 12.0 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 SHALO_RS04795 bc189f72a9a20fd7b55da0b4dd79d411 315 SMART SM00320 275 313 0.0012 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 SHALO_RS04795 bc189f72a9a20fd7b55da0b4dd79d411 315 SMART SM00320 193 231 10.0 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 SHALO_RS02440 f060ee327643fad2cf709ef99587a30f 1508 Pfam PF04983 RNA polymerase Rpb1, domain 3 499 641 8.9E-29 T 11-11-2016 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHALO_RS02440 f060ee327643fad2cf709ef99587a30f 1508 Pfam PF05000 RNA polymerase Rpb1, domain 4 670 749 1.3E-16 T 11-11-2016 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHALO_RS02440 f060ee327643fad2cf709ef99587a30f 1508 Gene3D G3DSA:2.40.50.100 1286 1342 8.2E-8 T 11-11-2016 SHALO_RS02440 f060ee327643fad2cf709ef99587a30f 1508 Pfam PF04997 RNA polymerase Rpb1, domain 1 16 352 2.6E-84 T 11-11-2016 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHALO_RS02440 f060ee327643fad2cf709ef99587a30f 1508 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 16 1506 10.496 T 11-11-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHALO_RS02440 f060ee327643fad2cf709ef99587a30f 1508 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 22 1497 0.0 T 11-11-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHALO_RS02440 f060ee327643fad2cf709ef99587a30f 1508 Gene3D G3DSA:2.40.40.20 359 386 4.4E-38 T 11-11-2016 SHALO_RS02440 f060ee327643fad2cf709ef99587a30f 1508 Gene3D G3DSA:2.40.40.20 427 497 4.4E-38 T 11-11-2016 SHALO_RS02440 f060ee327643fad2cf709ef99587a30f 1508 SMART SM00663 245 524 4.7E-175 T 11-11-2016 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHALO_RS02440 f060ee327643fad2cf709ef99587a30f 1508 Pfam PF04998 RNA polymerase Rpb1, domain 5 752 1402 6.6E-69 T 11-11-2016 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHALO_RS02440 f060ee327643fad2cf709ef99587a30f 1508 SUPERFAMILY SSF64484 16 930 0.0 T 11-11-2016 SHALO_RS02440 f060ee327643fad2cf709ef99587a30f 1508 SUPERFAMILY SSF64484 1264 1495 0.0 T 11-11-2016 SHALO_RS02440 f060ee327643fad2cf709ef99587a30f 1508 Pfam PF00623 RNA polymerase Rpb1, domain 2 354 407 4.3E-9 T 11-11-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHALO_RS02440 f060ee327643fad2cf709ef99587a30f 1508 Pfam PF00623 RNA polymerase Rpb1, domain 2 397 495 5.4E-28 T 11-11-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHALO_RS00270 ce17a963ed19708edadd87b4eac1847f 365 Gene3D G3DSA:1.10.150.130 89 183 5.0E-7 T 11-11-2016 IPR023109 Integrase/recombinase, N-terminal SHALO_RS00270 ce17a963ed19708edadd87b4eac1847f 365 SUPERFAMILY SSF56349 83 359 1.18E-46 T 11-11-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 SHALO_RS00270 ce17a963ed19708edadd87b4eac1847f 365 Pfam PF00589 Phage integrase family 190 352 1.8E-22 T 11-11-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 SHALO_RS00270 ce17a963ed19708edadd87b4eac1847f 365 Gene3D G3DSA:1.10.443.10 189 358 6.4E-31 T 11-11-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 SHALO_RS07010 a78ef8239cdbc50aea4db3c512bd8885 103 Gene3D G3DSA:3.30.70.930 1 95 6.3E-22 T 11-11-2016 IPR029756 MTH1187/YkoF-like SHALO_RS07010 a78ef8239cdbc50aea4db3c512bd8885 103 SUPERFAMILY SSF89957 1 97 3.53E-21 T 11-11-2016 IPR029756 MTH1187/YkoF-like SHALO_RS07010 a78ef8239cdbc50aea4db3c512bd8885 103 Pfam PF01910 Thiamine-binding protein 5 94 9.1E-20 T 11-11-2016 IPR002767 Thiamine-binding protein SHALO_RS11820 3b043f2487e06450b4483506e4c56ae8 139 SUPERFAMILY SSF54637 5 125 1.19E-31 T 11-11-2016 IPR029069 HotDog domain SHALO_RS11820 3b043f2487e06450b4483506e4c56ae8 139 Pfam PF03061 Thioesterase superfamily 22 92 5.3E-19 T 11-11-2016 IPR006683 Thioesterase domain Reactome: R-HSA-75105 SHALO_RS11820 3b043f2487e06450b4483506e4c56ae8 139 Gene3D G3DSA:3.10.129.10 6 125 1.1E-34 T 11-11-2016 IPR029069 HotDog domain SHALO_RS00090 4596ba0fa85fc56b9dfa422038574e11 169 SUPERFAMILY SSF52016 3 166 1.55E-45 T 11-11-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel SHALO_RS00090 4596ba0fa85fc56b9dfa422038574e11 169 TIGRFAM TIGR02087 LEUD_arch: 3-isopropylmalate dehydratase, small subunit 7 161 4.6E-57 T 11-11-2016 IPR011827 Hydrolyase LeuD/HacB/DmdB GO:0008152|GO:0016836 KEGG: 00290+4.2.1.33 SHALO_RS00090 4596ba0fa85fc56b9dfa422038574e11 169 Gene3D G3DSA:3.20.19.10 9 161 5.9E-31 T 11-11-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel SHALO_RS00090 4596ba0fa85fc56b9dfa422038574e11 169 Hamap MF_01032 Methanogen homoaconitase small subunit [hacB]. 5 164 34.057 T 11-11-2016 IPR011827 Hydrolyase LeuD/HacB/DmdB GO:0008152|GO:0016836 KEGG: 00290+4.2.1.33 SHALO_RS00090 4596ba0fa85fc56b9dfa422038574e11 169 Pfam PF00694 Aconitase C-terminal domain 24 102 1.2E-20 T 11-11-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33 SHALO_RS07720 7e358b72c472af1936b36b477ad2f31b 186 SUPERFAMILY SSF46689 4 74 1.28E-14 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 SHALO_RS07720 7e358b72c472af1936b36b477ad2f31b 186 SUPERFAMILY SSF48498 90 185 2.49E-7 T 11-11-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal SHALO_RS07720 7e358b72c472af1936b36b477ad2f31b 186 Gene3D G3DSA:1.10.357.10 11 185 4.4E-24 T 11-11-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SHALO_RS07720 7e358b72c472af1936b36b477ad2f31b 186 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 3.7E-7 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SHALO_RS07720 7e358b72c472af1936b36b477ad2f31b 186 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 3.7E-7 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SHALO_RS07720 7e358b72c472af1936b36b477ad2f31b 186 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 58 2.4E-12 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SHALO_RS05645 c492dc6310ba8fde048d522b68925fa4 168 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 1 168 3.1E-51 T 11-11-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 SHALO_RS05645 c492dc6310ba8fde048d522b68925fa4 168 SUPERFAMILY SSF50249 1 168 4.11E-48 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold SHALO_RS05645 c492dc6310ba8fde048d522b68925fa4 168 Gene3D G3DSA:2.40.50.140 1 168 2.8E-42 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold SHALO_RS05645 c492dc6310ba8fde048d522b68925fa4 168 PIRSF PIRSF002070 1 155 3.2E-30 T 11-11-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 SHALO_RS05645 c492dc6310ba8fde048d522b68925fa4 168 Pfam PF00436 Single-strand binding protein family 2 104 6.7E-34 T 11-11-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 SHALO_RS05645 c492dc6310ba8fde048d522b68925fa4 168 Hamap MF_00984 Single-stranded DNA-binding protein. 2 109 32.619 T 11-11-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 SHALO_RS06920 7b46949ca2ced7a16283574e815144ce 225 Hamap MF_01393 ATP synthase subunit a [atpB]. 11 222 14.53 T 11-11-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 SHALO_RS06920 7b46949ca2ced7a16283574e815144ce 225 PRINTS PR00123 ATP synthase A subunit signature 202 217 2.0E-13 T 11-11-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 SHALO_RS06920 7b46949ca2ced7a16283574e815144ce 225 PRINTS PR00123 ATP synthase A subunit signature 78 94 2.0E-13 T 11-11-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 SHALO_RS06920 7b46949ca2ced7a16283574e815144ce 225 PRINTS PR00123 ATP synthase A subunit signature 138 153 2.0E-13 T 11-11-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 SHALO_RS06920 7b46949ca2ced7a16283574e815144ce 225 PRINTS PR00123 ATP synthase A subunit signature 158 180 2.0E-13 T 11-11-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 SHALO_RS06920 7b46949ca2ced7a16283574e815144ce 225 SUPERFAMILY SSF81336 72 215 5.36E-35 T 11-11-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 SHALO_RS06920 7b46949ca2ced7a16283574e815144ce 225 Pfam PF00119 ATP synthase A chain 23 215 4.9E-50 T 11-11-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 SHALO_RS06920 7b46949ca2ced7a16283574e815144ce 225 Gene3D G3DSA:1.20.120.220 72 218 1.5E-39 T 11-11-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 SHALO_RS06920 7b46949ca2ced7a16283574e815144ce 225 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 19 217 2.5E-39 T 11-11-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 SHALO_RS06920 7b46949ca2ced7a16283574e815144ce 225 ProSitePatterns PS00449 ATP synthase a subunit signature. 161 170 - T 11-11-2016 IPR023011 ATPase, F0 complex, subunit A, active site Reactome: R-HSA-163210 SHALO_RS02745 aa57e80bb29491031f963b85b019485d 272 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 151 163 - T 11-11-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 SHALO_RS02745 aa57e80bb29491031f963b85b019485d 272 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 10 269 18.501 T 11-11-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 SHALO_RS02745 aa57e80bb29491031f963b85b019485d 272 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 4 268 7.8E-71 T 11-11-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 SHALO_RS02745 aa57e80bb29491031f963b85b019485d 272 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 13 263 1.2E-66 T 11-11-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 SHALO_RS07125 dea8ca809d616212851200dd7773ffc7 166 SUPERFAMILY SSF55729 4 163 9.61E-28 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase SHALO_RS07125 dea8ca809d616212851200dd7773ffc7 166 Pfam PF13420 Acetyltransferase (GNAT) domain 5 152 4.3E-19 T 11-11-2016 SHALO_RS07125 dea8ca809d616212851200dd7773ffc7 166 Gene3D G3DSA:3.40.630.30 4 164 1.1E-32 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase SHALO_RS01060 62bf8785cd4dd0e0d0df3997b8ec20c5 270 PIRSF PIRSF005917 1 270 1.4E-76 T 11-11-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SHALO_RS01060 62bf8785cd4dd0e0d0df3997b8ec20c5 270 Gene3D G3DSA:3.40.1010.10 2 115 9.7E-11 T 11-11-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 SHALO_RS01060 62bf8785cd4dd0e0d0df3997b8ec20c5 270 Gene3D G3DSA:3.30.950.10 116 225 5.6E-30 T 11-11-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 SHALO_RS01060 62bf8785cd4dd0e0d0df3997b8ec20c5 270 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 85 96 - T 11-11-2016 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SHALO_RS01060 62bf8785cd4dd0e0d0df3997b8ec20c5 270 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 1 225 31.045 T 11-11-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SHALO_RS01060 62bf8785cd4dd0e0d0df3997b8ec20c5 270 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 2 267 2.1E-75 T 11-11-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SHALO_RS01060 62bf8785cd4dd0e0d0df3997b8ec20c5 270 SUPERFAMILY SSF53790 2 223 4.84E-62 T 11-11-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 SHALO_RS01060 62bf8785cd4dd0e0d0df3997b8ec20c5 270 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 2 204 1.2E-24 T 11-11-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 SHALO_RS04360 63a86f31d0e85d49c7421f79c33b23d8 190 SUPERFAMILY SSF54211 86 175 4.25E-27 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SHALO_RS04360 63a86f31d0e85d49c7421f79c33b23d8 190 SUPERFAMILY SSF54211 3 80 2.53E-29 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SHALO_RS04360 63a86f31d0e85d49c7421f79c33b23d8 190 Gene3D G3DSA:3.30.230.40 3 80 4.0E-32 T 11-11-2016 SHALO_RS04360 63a86f31d0e85d49c7421f79c33b23d8 190 Gene3D G3DSA:3.30.230.40 88 190 1.4E-26 T 11-11-2016 SHALO_RS04360 63a86f31d0e85d49c7421f79c33b23d8 190 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 2 190 34.964 T 11-11-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 SHALO_RS04360 63a86f31d0e85d49c7421f79c33b23d8 190 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 153 165 - T 11-11-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 SHALO_RS04360 63a86f31d0e85d49c7421f79c33b23d8 190 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 59 72 - T 11-11-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 SHALO_RS04360 63a86f31d0e85d49c7421f79c33b23d8 190 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 29 171 2.8E-56 T 11-11-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 SHALO_RS12630 47beb56fe398781c4d7de428fba74cbd 632 Gene3D G3DSA:3.30.565.10 504 628 2.7E-10 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS12630 47beb56fe398781c4d7de428fba74cbd 632 SUPERFAMILY SSF158472 365 412 5.89E-7 T 11-11-2016 SHALO_RS12630 47beb56fe398781c4d7de428fba74cbd 632 Pfam PF00672 HAMP domain 344 409 1.3E-10 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SHALO_RS12630 47beb56fe398781c4d7de428fba74cbd 632 SMART SM00304 361 413 1.1E-6 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SHALO_RS12630 47beb56fe398781c4d7de428fba74cbd 632 Pfam PF08269 Cache domain 168 331 1.7E-9 T 11-11-2016 IPR004010 Double Cache domain 2 SHALO_RS12630 47beb56fe398781c4d7de428fba74cbd 632 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 543 625 7.0E-6 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS12630 47beb56fe398781c4d7de428fba74cbd 632 Pfam PF07568 Histidine kinase 439 514 1.4E-21 T 11-11-2016 IPR011495 Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain SHALO_RS12630 47beb56fe398781c4d7de428fba74cbd 632 SUPERFAMILY SSF55874 511 628 2.88E-12 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS06235 2f7d186bacfbd7c11882f45c1b5d701d 91 PIRSF PIRSF003108 1 87 1.9E-23 T 11-11-2016 IPR026262 Antitoxin DinJ GO:0000986|GO:0015643|GO:0044010 SHALO_RS06235 2f7d186bacfbd7c11882f45c1b5d701d 91 Pfam PF04221 RelB antitoxin 5 79 3.1E-21 T 11-11-2016 IPR007337 RelB antitoxin/Antitoxin DinJ SHALO_RS06235 2f7d186bacfbd7c11882f45c1b5d701d 91 TIGRFAM TIGR02384 RelB_DinJ: addiction module antitoxin, RelB/DinJ family 1 72 3.6E-22 T 11-11-2016 IPR007337 RelB antitoxin/Antitoxin DinJ SHALO_RS00180 94458dcd5e500966811472d6f99fdbdb 178 Gene3D G3DSA:1.20.1290.10 61 174 7.3E-21 T 11-11-2016 IPR029032 AhpD-like Reactome: R-HSA-5628897 SHALO_RS00180 94458dcd5e500966811472d6f99fdbdb 178 SUPERFAMILY SSF69118 1 177 1.44E-37 T 11-11-2016 IPR029032 AhpD-like Reactome: R-HSA-5628897 SHALO_RS02905 d9c1ab4b2f9cd5c75e831fc818cc9d2d 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 3.7E-12 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_RS02905 d9c1ab4b2f9cd5c75e831fc818cc9d2d 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 3.7E-12 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_RS02905 d9c1ab4b2f9cd5c75e831fc818cc9d2d 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 3.7E-12 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_RS02905 d9c1ab4b2f9cd5c75e831fc818cc9d2d 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 3.7E-12 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_RS02905 d9c1ab4b2f9cd5c75e831fc818cc9d2d 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 213 233 3.7E-12 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHALO_RS02905 d9c1ab4b2f9cd5c75e831fc818cc9d2d 273 Gene3D G3DSA:3.40.50.720 5 199 3.6E-66 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS02905 d9c1ab4b2f9cd5c75e831fc818cc9d2d 273 PIRSF PIRSF000094 1 258 5.7E-116 T 11-11-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 SHALO_RS02905 d9c1ab4b2f9cd5c75e831fc818cc9d2d 273 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 250 3.0E-87 T 11-11-2016 SHALO_RS02905 d9c1ab4b2f9cd5c75e831fc818cc9d2d 273 SUPERFAMILY SSF51735 4 254 3.12E-66 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS13460 71a1131e3efb5a9a261d39a79b336f35 742 Pfam PF01568 Molydopterin dinucleotide binding domain 610 734 3.9E-12 T 11-11-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 SHALO_RS13460 71a1131e3efb5a9a261d39a79b336f35 742 Pfam PF00384 Molybdopterin oxidoreductase 3 353 2.0E-42 T 11-11-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS13460 71a1131e3efb5a9a261d39a79b336f35 742 Gene3D G3DSA:2.40.40.20 558 569 1.8E-42 T 11-11-2016 SHALO_RS13460 71a1131e3efb5a9a261d39a79b336f35 742 Gene3D G3DSA:2.40.40.20 603 742 1.8E-42 T 11-11-2016 SHALO_RS13460 71a1131e3efb5a9a261d39a79b336f35 742 Gene3D G3DSA:2.40.40.20 435 465 1.8E-42 T 11-11-2016 SHALO_RS13460 71a1131e3efb5a9a261d39a79b336f35 742 SUPERFAMILY SSF53706 1 423 2.22E-116 T 11-11-2016 SHALO_RS13460 71a1131e3efb5a9a261d39a79b336f35 742 Gene3D G3DSA:3.40.50.740 1 14 6.6E-35 T 11-11-2016 SHALO_RS13460 71a1131e3efb5a9a261d39a79b336f35 742 Gene3D G3DSA:3.40.50.740 233 364 6.6E-35 T 11-11-2016 SHALO_RS13460 71a1131e3efb5a9a261d39a79b336f35 742 Gene3D G3DSA:3.40.228.10 15 202 3.5E-66 T 11-11-2016 SHALO_RS13460 71a1131e3efb5a9a261d39a79b336f35 742 SUPERFAMILY SSF50692 545 572 1.49E-28 T 11-11-2016 IPR009010 Aspartate decarboxylase-like domain SHALO_RS13460 71a1131e3efb5a9a261d39a79b336f35 742 SUPERFAMILY SSF50692 604 742 1.49E-28 T 11-11-2016 IPR009010 Aspartate decarboxylase-like domain SHALO_RS08200 555fb832080cb9cb6528f13ca570002d 248 Pfam PF00731 AIR carboxylase 121 243 4.7E-14 T 11-11-2016 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 SHALO_RS08200 555fb832080cb9cb6528f13ca570002d 248 SUPERFAMILY SSF52255 120 247 2.35E-27 T 11-11-2016 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 SHALO_RS08200 555fb832080cb9cb6528f13ca570002d 248 Gene3D G3DSA:3.40.50.7700 120 245 2.2E-22 T 11-11-2016 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 SHALO_RS08200 555fb832080cb9cb6528f13ca570002d 248 SMART SM01001 119 248 1.4E-29 T 11-11-2016 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 SHALO_RS00995 181d5bba8bb61cca6f5ee19c7a3d7aa6 798 SUPERFAMILY SSF48452 607 796 9.01E-6 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SHALO_RS00995 181d5bba8bb61cca6f5ee19c7a3d7aa6 798 SUPERFAMILY SSF48452 717 785 2.35E-7 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SHALO_RS00995 181d5bba8bb61cca6f5ee19c7a3d7aa6 798 SUPERFAMILY SSF48452 259 447 2.35E-7 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SHALO_RS00995 181d5bba8bb61cca6f5ee19c7a3d7aa6 798 SUPERFAMILY SSF48452 175 205 2.35E-7 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SHALO_RS07890 542eae7af80ac3f83592edbcc73847fa 393 SMART SM00304 62 116 1.7E-6 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SHALO_RS07890 542eae7af80ac3f83592edbcc73847fa 393 SUPERFAMILY SSF58104 84 393 1.19E-61 T 11-11-2016 SHALO_RS07890 542eae7af80ac3f83592edbcc73847fa 393 Gene3D G3DSA:1.10.287.950 150 349 8.1E-48 T 11-11-2016 SHALO_RS07890 542eae7af80ac3f83592edbcc73847fa 393 SMART SM00283 131 392 6.8E-43 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SHALO_RS07890 542eae7af80ac3f83592edbcc73847fa 393 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 201 391 9.6E-38 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SHALO_RS07890 542eae7af80ac3f83592edbcc73847fa 393 Pfam PF00672 HAMP domain 43 112 1.8E-7 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SHALO_RS03555 7ef6407bc0bd1581dd60058d564b76df 291 Pfam PF03547 Membrane transport protein 11 125 1.7E-15 T 11-11-2016 IPR004776 Membrane transport protein GO:0016021|GO:0055085 SHALO_RS07575 ea027b061e16ae1dea9473c4947b0ce2 111 Pfam PF14358 Domain of unknown function (DUF4405) 5 59 1.2E-7 T 11-11-2016 IPR025517 Domain of unknown function DUF4405 SHALO_RS04105 4f7d0532e85b6804e52c85bd75e89610 279 PIRSF PIRSF012524 3 279 2.0E-58 T 11-11-2016 IPR014464 Conserved virulence factor B SHALO_RS04105 4f7d0532e85b6804e52c85bd75e89610 279 Pfam PF13509 S1 domain 7 66 1.8E-20 T 11-11-2016 SHALO_RS07495 968b1623a99854c084fe3b90a28d2197 154 Gene3D G3DSA:3.90.10.10 45 144 5.6E-12 T 11-11-2016 SHALO_RS07495 968b1623a99854c084fe3b90a28d2197 154 SUPERFAMILY SSF48695 62 147 1.35E-13 T 11-11-2016 IPR011031 Multihaem cytochrome SHALO_RS07495 968b1623a99854c084fe3b90a28d2197 154 Pfam PF14537 Cytochrome c3 57 142 1.7E-15 T 11-11-2016 SHALO_RS04120 1a3b3f9731c89e69be36c83a86d7f6b9 936 SUPERFAMILY SSF103515 631 934 1.07E-35 T 11-11-2016 IPR005546 Autotransporter beta-domain SHALO_RS04120 1a3b3f9731c89e69be36c83a86d7f6b9 936 Gene3D G3DSA:2.40.128.130 641 934 1.9E-37 T 11-11-2016 IPR005546 Autotransporter beta-domain SHALO_RS04120 1a3b3f9731c89e69be36c83a86d7f6b9 936 SMART SM00869 670 928 1.0E-29 T 11-11-2016 IPR005546 Autotransporter beta-domain SHALO_RS04120 1a3b3f9731c89e69be36c83a86d7f6b9 936 Pfam PF03797 Autotransporter beta-domain 670 927 8.6E-29 T 11-11-2016 IPR005546 Autotransporter beta-domain SHALO_RS05670 4eeffc59002a75eb029d80ffe34856f9 340 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 17 328 1.2E-132 T 11-11-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 SHALO_RS05670 4eeffc59002a75eb029d80ffe34856f9 340 SUPERFAMILY SSF48179 185 334 1.87E-68 T 11-11-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SHALO_RS05670 4eeffc59002a75eb029d80ffe34856f9 340 Gene3D G3DSA:3.50.50.60 5 41 2.8E-4 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHALO_RS05670 4eeffc59002a75eb029d80ffe34856f9 340 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 185 328 4.6E-64 T 11-11-2016 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 SHALO_RS05670 4eeffc59002a75eb029d80ffe34856f9 340 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 16 179 4.1E-74 T 11-11-2016 IPR013116 Acetohydroxy acid isomeroreductase, NADPH-binding domain KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 SHALO_RS05670 4eeffc59002a75eb029d80ffe34856f9 340 Hamap MF_00435 Ketol-acid reductoisomerase [ilvC]. 3 330 43.948 T 11-11-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 SHALO_RS05670 4eeffc59002a75eb029d80ffe34856f9 340 Gene3D G3DSA:1.10.1040.10 42 327 3.6E-111 T 11-11-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 SHALO_RS05670 4eeffc59002a75eb029d80ffe34856f9 340 SUPERFAMILY SSF51735 4 184 2.54E-71 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS02360 300107525636a7b477343493598b1d27 1198 SUPERFAMILY SSF51730 132 467 2.9E-69 T 11-11-2016 IPR029041 FAD-linked oxidoreductase-like SHALO_RS02360 300107525636a7b477343493598b1d27 1198 SUPERFAMILY SSF53720 521 983 2.09E-99 T 11-11-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 SHALO_RS02360 300107525636a7b477343493598b1d27 1198 Gene3D G3DSA:3.20.20.220 132 469 1.8E-65 T 11-11-2016 IPR029041 FAD-linked oxidoreductase-like SHALO_RS02360 300107525636a7b477343493598b1d27 1198 PIRSF PIRSF000197 2 1198 1.9E-303 T 11-11-2016 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 SHALO_RS02360 300107525636a7b477343493598b1d27 1198 Gene3D G3DSA:3.40.309.10 770 960 3.2E-39 T 11-11-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 SHALO_RS02360 300107525636a7b477343493598b1d27 1198 Pfam PF00171 Aldehyde dehydrogenase family 540 982 8.6E-110 T 11-11-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 SHALO_RS02360 300107525636a7b477343493598b1d27 1198 Gene3D G3DSA:3.40.605.10 523 769 1.7E-50 T 11-11-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 SHALO_RS02360 300107525636a7b477343493598b1d27 1198 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 782 793 - T 11-11-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 SHALO_RS02360 300107525636a7b477343493598b1d27 1198 Pfam PF01619 Proline dehydrogenase 134 430 1.3E-61 T 11-11-2016 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922 SHALO_RS02360 300107525636a7b477343493598b1d27 1198 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 754 761 - T 11-11-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 SHALO_RS12270 b1c19b83d39aef168efb2b70aa323463 424 Pfam PF12704 MacB-like periplasmic core domain 19 215 7.9E-9 T 11-11-2016 IPR025857 MacB-like periplasmic core domain SHALO_RS12270 b1c19b83d39aef168efb2b70aa323463 424 Pfam PF02687 FtsX-like permease family 302 411 1.4E-16 T 11-11-2016 IPR003838 ABC transporter permease protein domain GO:0016020 SHALO_RS00640 3ad2cf666be0a0510226c1c540ec407f 171 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 3 171 27.472 T 11-11-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 SHALO_RS00640 3ad2cf666be0a0510226c1c540ec407f 171 Gene3D G3DSA:3.10.20.80 5 80 3.8E-34 T 11-11-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 SHALO_RS00640 3ad2cf666be0a0510226c1c540ec407f 171 ProSitePatterns PS00938 Initiation factor 3 signature. 60 73 - T 11-11-2016 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 SHALO_RS00640 3ad2cf666be0a0510226c1c540ec407f 171 SUPERFAMILY SSF54364 7 80 4.32E-29 T 11-11-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 SHALO_RS00640 3ad2cf666be0a0510226c1c540ec407f 171 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 9 171 6.6E-66 T 11-11-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 SHALO_RS00640 3ad2cf666be0a0510226c1c540ec407f 171 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 85 170 4.1E-30 T 11-11-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 SHALO_RS00640 3ad2cf666be0a0510226c1c540ec407f 171 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 9 78 9.8E-31 T 11-11-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 SHALO_RS00640 3ad2cf666be0a0510226c1c540ec407f 171 SUPERFAMILY SSF55200 84 171 7.72E-27 T 11-11-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 SHALO_RS00640 3ad2cf666be0a0510226c1c540ec407f 171 Gene3D G3DSA:3.30.110.10 81 171 3.9E-29 T 11-11-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 SHALO_RS00910 fd1cc46b236b8620d571d4243c5fd7a2 412 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 15 412 4.0E-53 T 11-11-2016 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) SHALO_RS00910 fd1cc46b236b8620d571d4243c5fd7a2 412 Gene3D G3DSA:2.40.160.60 21 412 7.6E-103 T 11-11-2016 SHALO_RS00910 fd1cc46b236b8620d571d4243c5fd7a2 412 SUPERFAMILY SSF56935 21 412 3.98E-72 T 11-11-2016 SHALO_RS08525 be605fdfacb12c68bcc4e95134e8a96c 270 SUPERFAMILY SSF109998 22 152 5.69E-17 T 11-11-2016 IPR027304 Trigger factor/SurA domain SHALO_RS08525 be605fdfacb12c68bcc4e95134e8a96c 270 SUPERFAMILY SSF54534 122 225 3.79E-25 T 11-11-2016 SHALO_RS08525 be605fdfacb12c68bcc4e95134e8a96c 270 Gene3D G3DSA:3.10.50.40 122 250 3.5E-38 T 11-11-2016 SHALO_RS08525 be605fdfacb12c68bcc4e95134e8a96c 270 Pfam PF13616 PPIC-type PPIASE domain 121 226 1.2E-19 T 11-11-2016 SHALO_RS12145 9f7b62bac2ae216f2a9c5b1978909892 147 Pfam PF03719 Ribosomal protein S5, C-terminal domain 85 147 1.3E-25 T 11-11-2016 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 SHALO_RS12145 9f7b62bac2ae216f2a9c5b1978909892 147 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 7 146 3.7E-64 T 11-11-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 SHALO_RS12145 9f7b62bac2ae216f2a9c5b1978909892 147 Pfam PF00333 Ribosomal protein S5, N-terminal domain 9 73 7.4E-29 T 11-11-2016 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 SHALO_RS12145 9f7b62bac2ae216f2a9c5b1978909892 147 SUPERFAMILY SSF54768 5 74 5.55E-24 T 11-11-2016 SHALO_RS12145 9f7b62bac2ae216f2a9c5b1978909892 147 Gene3D G3DSA:3.30.230.10 74 144 1.7E-29 T 11-11-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SHALO_RS12145 9f7b62bac2ae216f2a9c5b1978909892 147 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 147 31.35 T 11-11-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 SHALO_RS12145 9f7b62bac2ae216f2a9c5b1978909892 147 SUPERFAMILY SSF54211 77 146 8.09E-23 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SHALO_RS12145 9f7b62bac2ae216f2a9c5b1978909892 147 Gene3D G3DSA:3.30.160.20 7 71 7.5E-30 T 11-11-2016 IPR014720 Double-stranded RNA-binding domain SHALO_RS12145 9f7b62bac2ae216f2a9c5b1978909892 147 ProSitePatterns PS00585 Ribosomal protein S5 signature. 26 58 - T 11-11-2016 IPR018192 Ribosomal protein S5, N-terminal, conserved site SHALO_RS11090 77ef5bb701c9c1749a9752a04158f46b 577 Gene3D G3DSA:3.90.25.10 440 517 2.8E-9 T 11-11-2016 SHALO_RS11090 77ef5bb701c9c1749a9752a04158f46b 577 SUPERFAMILY SSF51735 263 524 1.89E-55 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS11090 77ef5bb701c9c1749a9752a04158f46b 577 Gene3D G3DSA:3.40.50.720 124 202 4.4E-8 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS11090 77ef5bb701c9c1749a9752a04158f46b 577 Gene3D G3DSA:3.40.50.720 263 439 5.2E-44 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS11090 77ef5bb701c9c1749a9752a04158f46b 577 Pfam PF02719 Polysaccharide biosynthesis protein 265 538 1.5E-115 T 11-11-2016 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain SHALO_RS11090 77ef5bb701c9c1749a9752a04158f46b 577 SUPERFAMILY SSF53335 105 311 5.15E-16 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS12390 bdcb1f48f3e5c60eebd0503ea92fad28 659 SMART SM00283 347 594 2.4E-71 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SHALO_RS12390 bdcb1f48f3e5c60eebd0503ea92fad28 659 Gene3D G3DSA:1.10.287.950 362 566 6.8E-53 T 11-11-2016 SHALO_RS12390 bdcb1f48f3e5c60eebd0503ea92fad28 659 SUPERFAMILY SSF58104 355 595 8.24E-60 T 11-11-2016 SHALO_RS12390 bdcb1f48f3e5c60eebd0503ea92fad28 659 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 408 591 3.2E-52 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SHALO_RS02965 462549f3485451cfd43f1166aa7ac810 364 Pfam PF00472 RF-1 domain 228 335 1.1E-39 T 11-11-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 SHALO_RS02965 462549f3485451cfd43f1166aa7ac810 364 Pfam PF03462 PCRF domain 31 219 1.0E-58 T 11-11-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 SHALO_RS02965 462549f3485451cfd43f1166aa7ac810 364 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 2 363 37.647 T 11-11-2016 IPR020853 Peptide chain release factor 2, bacterial GO:0005737|GO:0006415|GO:0016149 SHALO_RS02965 462549f3485451cfd43f1166aa7ac810 364 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 3 362 5.0E-158 T 11-11-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 SHALO_RS02965 462549f3485451cfd43f1166aa7ac810 364 SUPERFAMILY SSF75620 29 361 5.49E-128 T 11-11-2016 SHALO_RS02965 462549f3485451cfd43f1166aa7ac810 364 SMART SM00937 84 194 4.0E-59 T 11-11-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 SHALO_RS02965 462549f3485451cfd43f1166aa7ac810 364 Gene3D G3DSA:1.20.58.410 3 114 6.3E-24 T 11-11-2016 SHALO_RS02965 462549f3485451cfd43f1166aa7ac810 364 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 244 260 - T 11-11-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 SHALO_RS02965 462549f3485451cfd43f1166aa7ac810 364 Gene3D G3DSA:3.30.160.20 227 304 1.4E-36 T 11-11-2016 IPR014720 Double-stranded RNA-binding domain SHALO_RS12655 4f92b558e651cd6041627feaaa957074 315 Pfam PF16344 Domain of unknown function (DUF4974) 213 310 2.5E-7 T 11-11-2016 IPR032508 Protein FecR, C-terminal SHALO_RS12655 4f92b558e651cd6041627feaaa957074 315 Pfam PF16220 Domain of unknown function (DUF4880) 9 49 5.2E-8 T 11-11-2016 IPR032623 FecR, N-terminal SHALO_RS12655 4f92b558e651cd6041627feaaa957074 315 PIRSF PIRSF018266 2 315 1.8E-74 T 11-11-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component SHALO_RS12655 4f92b558e651cd6041627feaaa957074 315 Pfam PF04773 FecR protein 103 195 5.1E-20 T 11-11-2016 IPR006860 FecR protein SHALO_RS11405 a876f7c3fa908e842ec5480fd5d8f74e 312 Gene3D G3DSA:3.90.226.10 49 261 1.4E-40 T 11-11-2016 IPR029045 ClpP/crotonase-like domain SHALO_RS11405 a876f7c3fa908e842ec5480fd5d8f74e 312 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 190 199 9.8E-45 T 11-11-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 SHALO_RS11405 a876f7c3fa908e842ec5480fd5d8f74e 312 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 106 124 9.8E-45 T 11-11-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 SHALO_RS11405 a876f7c3fa908e842ec5480fd5d8f74e 312 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 146 159 9.8E-45 T 11-11-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 SHALO_RS11405 a876f7c3fa908e842ec5480fd5d8f74e 312 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 81 92 9.8E-45 T 11-11-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 SHALO_RS11405 a876f7c3fa908e842ec5480fd5d8f74e 312 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 162 175 9.8E-45 T 11-11-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 SHALO_RS11405 a876f7c3fa908e842ec5480fd5d8f74e 312 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 127 143 9.8E-45 T 11-11-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 SHALO_RS11405 a876f7c3fa908e842ec5480fd5d8f74e 312 SUPERFAMILY SSF52096 30 309 1.29E-84 T 11-11-2016 IPR029045 ClpP/crotonase-like domain SHALO_RS11405 a876f7c3fa908e842ec5480fd5d8f74e 312 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 4 309 44.695 T 11-11-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 SHALO_RS11405 a876f7c3fa908e842ec5480fd5d8f74e 312 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 4 141 2.8E-49 T 11-11-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 SHALO_RS11405 a876f7c3fa908e842ec5480fd5d8f74e 312 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 309 4.2E-138 T 11-11-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 SHALO_RS14180 58b1f1cff945839131700edf71fb9056 75 Pfam PF00486 Transcriptional regulatory protein, C terminal 4 39 5.8E-5 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS14180 58b1f1cff945839131700edf71fb9056 75 Gene3D G3DSA:1.10.10.10 7 40 2.8E-4 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS06955 9e79f8e493a27e412e4b54ce9671a329 244 SUPERFAMILY SSF55120 1 244 5.9E-62 T 11-11-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SHALO_RS06955 9e79f8e493a27e412e4b54ce9671a329 244 PIRSF PIRSF001430 1 244 8.4E-69 T 11-11-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 SHALO_RS06955 9e79f8e493a27e412e4b54ce9671a329 244 Pfam PF01416 tRNA pseudouridine synthase 8 107 8.3E-7 T 11-11-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SHALO_RS06955 9e79f8e493a27e412e4b54ce9671a329 244 Pfam PF01416 tRNA pseudouridine synthase 145 244 2.2E-11 T 11-11-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SHALO_RS06955 9e79f8e493a27e412e4b54ce9671a329 244 Gene3D G3DSA:3.30.70.580 2 108 2.4E-27 T 11-11-2016 IPR020094 Pseudouridine synthase I, TruA, N-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 SHALO_RS06955 9e79f8e493a27e412e4b54ce9671a329 244 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 1 244 30.476 T 11-11-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 SHALO_RS06955 9e79f8e493a27e412e4b54ce9671a329 244 Gene3D G3DSA:3.30.70.660 110 244 1.8E-26 T 11-11-2016 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 SHALO_RS06955 9e79f8e493a27e412e4b54ce9671a329 244 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 2 239 4.8E-49 T 11-11-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 SHALO_RS03580 7586341e15bb9b150708a028d9d6c294 194 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 11 42 2.5E-5 T 11-11-2016 IPR001451 Hexapeptide repeat SHALO_RS03580 7586341e15bb9b150708a028d9d6c294 194 Gene3D G3DSA:2.160.10.10 9 160 1.9E-30 T 11-11-2016 SHALO_RS03580 7586341e15bb9b150708a028d9d6c294 194 SUPERFAMILY SSF51161 4 159 2.23E-28 T 11-11-2016 IPR011004 Trimeric LpxA-like SHALO_RS03100 0d7fbfee42297dd7d8cf26d277164970 148 SUPERFAMILY SSF52402 2 148 3.52E-33 T 11-11-2016 SHALO_RS03100 0d7fbfee42297dd7d8cf26d277164970 148 PIRSF PIRSF006276 1 148 5.6E-19 T 11-11-2016 IPR006015 Universal stress protein A SHALO_RS03100 0d7fbfee42297dd7d8cf26d277164970 148 Gene3D G3DSA:3.40.50.620 1 148 9.7E-35 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHALO_RS03100 0d7fbfee42297dd7d8cf26d277164970 148 Pfam PF00582 Universal stress protein family 1 147 1.5E-30 T 11-11-2016 IPR006016 UspA GO:0006950 SHALO_RS03100 0d7fbfee42297dd7d8cf26d277164970 148 PRINTS PR01438 Universal stress protein signature 2 20 4.9E-17 T 11-11-2016 IPR006015 Universal stress protein A SHALO_RS03100 0d7fbfee42297dd7d8cf26d277164970 148 PRINTS PR01438 Universal stress protein signature 108 120 4.9E-17 T 11-11-2016 IPR006015 Universal stress protein A SHALO_RS03100 0d7fbfee42297dd7d8cf26d277164970 148 PRINTS PR01438 Universal stress protein signature 126 148 4.9E-17 T 11-11-2016 IPR006015 Universal stress protein A SHALO_RS03225 e3303f475b2a61eb536fa183a07b8506 231 Gene3D G3DSA:3.40.50.300 1 223 5.3E-55 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS03225 e3303f475b2a61eb536fa183a07b8506 231 SMART SM00382 26 210 2.3E-5 T 11-11-2016 IPR003593 AAA+ ATPase domain SHALO_RS03225 e3303f475b2a61eb536fa183a07b8506 231 SUPERFAMILY SSF52540 2 223 6.48E-52 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS03225 e3303f475b2a61eb536fa183a07b8506 231 ProSitePatterns PS00211 ABC transporters family signature. 132 146 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHALO_RS03225 e3303f475b2a61eb536fa183a07b8506 231 Pfam PF00005 ABC transporter 18 159 2.6E-26 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_RS00395 86a02f27e6737e4fd2e8221cfdb7756a 951 Gene3D G3DSA:3.40.50.300 392 583 3.5E-30 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS00395 86a02f27e6737e4fd2e8221cfdb7756a 951 Gene3D G3DSA:3.40.50.300 598 646 2.0E-5 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS00395 86a02f27e6737e4fd2e8221cfdb7756a 951 Gene3D G3DSA:3.40.50.300 780 834 2.0E-5 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS00395 86a02f27e6737e4fd2e8221cfdb7756a 951 Pfam PF13604 AAA domain 414 601 1.8E-45 T 11-11-2016 SHALO_RS00395 86a02f27e6737e4fd2e8221cfdb7756a 951 SUPERFAMILY SSF55464 8 286 1.19E-76 T 11-11-2016 SHALO_RS00395 86a02f27e6737e4fd2e8221cfdb7756a 951 TIGRFAM TIGR02686 relax_trwC: conjugative relaxase domain 12 285 1.7E-71 T 11-11-2016 IPR014059 Conjugative relaxase, N-terminal SHALO_RS00395 86a02f27e6737e4fd2e8221cfdb7756a 951 Pfam PF08751 TrwC relaxase 11 285 8.2E-87 T 11-11-2016 IPR014862 TrwC relaxase SHALO_RS00395 86a02f27e6737e4fd2e8221cfdb7756a 951 SUPERFAMILY SSF52540 525 582 9.82E-28 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS00395 86a02f27e6737e4fd2e8221cfdb7756a 951 SUPERFAMILY SSF52540 727 834 9.82E-28 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS00395 86a02f27e6737e4fd2e8221cfdb7756a 951 SUPERFAMILY SSF52540 613 645 9.82E-28 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS00395 86a02f27e6737e4fd2e8221cfdb7756a 951 SUPERFAMILY SSF52540 410 553 1.78E-21 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS09890 40865b0c5550fc9b910a48075df1a217 189 SUPERFAMILY SSF55811 6 183 1.14E-37 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SHALO_RS09890 40865b0c5550fc9b910a48075df1a217 189 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 10 182 6.6E-44 T 11-11-2016 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 SHALO_RS09890 40865b0c5550fc9b910a48075df1a217 189 Gene3D G3DSA:3.90.79.10 4 187 1.4E-54 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SHALO_RS12345 63f0288e6971774e82d00446433f661b 338 SUPERFAMILY SSF55073 178 335 2.04E-49 T 11-11-2016 IPR029787 Nucleotide cyclase SHALO_RS12345 63f0288e6971774e82d00446433f661b 338 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 171 333 3.3E-47 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS12345 63f0288e6971774e82d00446433f661b 338 Pfam PF00989 PAS fold 5 55 3.0E-5 T 11-11-2016 IPR013767 PAS fold GO:0006355 SHALO_RS12345 63f0288e6971774e82d00446433f661b 338 Gene3D G3DSA:3.30.450.20 5 74 3.5E-9 T 11-11-2016 SHALO_RS12345 63f0288e6971774e82d00446433f661b 338 Gene3D G3DSA:3.30.70.270 175 336 1.6E-55 T 11-11-2016 SHALO_RS12345 63f0288e6971774e82d00446433f661b 338 Pfam PF00990 Diguanylate cyclase, GGDEF domain 173 330 2.8E-50 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS12345 63f0288e6971774e82d00446433f661b 338 SMART SM00267 161 334 1.1E-59 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS12345 63f0288e6971774e82d00446433f661b 338 SUPERFAMILY SSF55785 6 77 2.79E-9 T 11-11-2016 IPR000014 PAS domain SHALO_RS09340 89a0e8d7aac69a5b96e264d8112e6e1d 151 SUPERFAMILY SSF47175 56 143 4.56E-6 T 11-11-2016 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 SHALO_RS09340 89a0e8d7aac69a5b96e264d8112e6e1d 151 Gene3D G3DSA:1.20.120.10 102 143 5.9E-5 T 11-11-2016 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 SHALO_RS14845 04c8d90251e21c222e3f10200caf05df 177 Gene3D G3DSA:1.25.40.20 23 135 2.3E-28 T 11-11-2016 IPR020683 Ankyrin repeat-containing domain SHALO_RS14845 04c8d90251e21c222e3f10200caf05df 177 SMART SM00248 80 109 12.0 T 11-11-2016 IPR002110 Ankyrin repeat GO:0005515 SHALO_RS14845 04c8d90251e21c222e3f10200caf05df 177 SMART SM00248 47 76 0.018 T 11-11-2016 IPR002110 Ankyrin repeat GO:0005515 SHALO_RS14845 04c8d90251e21c222e3f10200caf05df 177 SMART SM00248 113 143 10.0 T 11-11-2016 IPR002110 Ankyrin repeat GO:0005515 SHALO_RS14845 04c8d90251e21c222e3f10200caf05df 177 Pfam PF12796 Ankyrin repeats (3 copies) 23 109 6.5E-11 T 11-11-2016 IPR020683 Ankyrin repeat-containing domain SHALO_RS14845 04c8d90251e21c222e3f10200caf05df 177 SUPERFAMILY SSF48403 19 136 9.66E-28 T 11-11-2016 IPR020683 Ankyrin repeat-containing domain SHALO_RS09575 6c5ef39766f5317f69f766b636efd14f 262 Gene3D G3DSA:3.40.50.300 3 238 8.8E-47 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS09575 6c5ef39766f5317f69f766b636efd14f 262 SMART SM00382 28 231 1.7E-7 T 11-11-2016 IPR003593 AAA+ ATPase domain SHALO_RS09575 6c5ef39766f5317f69f766b636efd14f 262 Pfam PF00005 ABC transporter 19 175 7.3E-23 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_RS09575 6c5ef39766f5317f69f766b636efd14f 262 SUPERFAMILY SSF52540 3 238 1.64E-46 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS00405 fc072d6975b2e01197b549a39d15ab27 94 Pfam PF13744 Helix-turn-helix domain 22 92 4.2E-13 T 11-11-2016 SHALO_RS00405 fc072d6975b2e01197b549a39d15ab27 94 SUPERFAMILY SSF47413 23 92 2.6E-8 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SHALO_RS00405 fc072d6975b2e01197b549a39d15ab27 94 Gene3D G3DSA:1.10.260.40 31 89 3.4E-4 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SHALO_RS00600 abdf2a6376100a3468a1f80545cc1cc1 355 Gene3D G3DSA:3.30.160.20 207 285 3.8E-33 T 11-11-2016 IPR014720 Double-stranded RNA-binding domain SHALO_RS00600 abdf2a6376100a3468a1f80545cc1cc1 355 Pfam PF00472 RF-1 domain 208 317 5.0E-41 T 11-11-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 SHALO_RS00600 abdf2a6376100a3468a1f80545cc1cc1 355 SUPERFAMILY SSF75620 9 350 5.89E-130 T 11-11-2016 SHALO_RS00600 abdf2a6376100a3468a1f80545cc1cc1 355 SMART SM00937 61 175 8.4E-56 T 11-11-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 SHALO_RS00600 abdf2a6376100a3468a1f80545cc1cc1 355 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 2 354 39.017 T 11-11-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 SHALO_RS00600 abdf2a6376100a3468a1f80545cc1cc1 355 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 4 352 2.9E-157 T 11-11-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 SHALO_RS00600 abdf2a6376100a3468a1f80545cc1cc1 355 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 224 240 - T 11-11-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 SHALO_RS00600 abdf2a6376100a3468a1f80545cc1cc1 355 Gene3D G3DSA:1.20.58.410 9 90 3.1E-12 T 11-11-2016 SHALO_RS00600 abdf2a6376100a3468a1f80545cc1cc1 355 Pfam PF03462 PCRF domain 11 200 7.6E-67 T 11-11-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 SHALO_RS11840 09481041a557badc6bc8ad25737ce69c 571 Gene3D G3DSA:3.40.1130.10 71 196 2.9E-5 T 11-11-2016 SHALO_RS11840 09481041a557badc6bc8ad25737ce69c 571 SUPERFAMILY SSF55729 307 447 7.21E-24 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase SHALO_RS11840 09481041a557badc6bc8ad25737ce69c 571 Gene3D G3DSA:3.40.630.30 318 445 5.4E-6 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase SHALO_RS11840 09481041a557badc6bc8ad25737ce69c 571 SMART SM00563 82 199 6.6E-8 T 11-11-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 SHALO_RS11840 09481041a557badc6bc8ad25737ce69c 571 Pfam PF01553 Acyltransferase 72 196 4.5E-11 T 11-11-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 SHALO_RS11840 09481041a557badc6bc8ad25737ce69c 571 Pfam PF13444 Acetyltransferase (GNAT) domain 325 426 1.2E-24 T 11-11-2016 SHALO_RS11840 09481041a557badc6bc8ad25737ce69c 571 SUPERFAMILY SSF69593 53 220 7.85E-14 T 11-11-2016 SHALO_RS10890 5acf6680026b7487ae561de79e0bee6f 393 Gene3D G3DSA:2.40.50.100 67 99 2.4E-16 T 11-11-2016 SHALO_RS10890 5acf6680026b7487ae561de79e0bee6f 393 Gene3D G3DSA:2.40.50.100 174 200 2.4E-16 T 11-11-2016 SHALO_RS10890 5acf6680026b7487ae561de79e0bee6f 393 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 62 286 2.0E-22 T 11-11-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SHALO_RS10890 5acf6680026b7487ae561de79e0bee6f 393 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 46 376 9.6E-50 T 11-11-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 SHALO_RS10890 5acf6680026b7487ae561de79e0bee6f 393 SUPERFAMILY SSF111369 54 290 2.09E-26 T 11-11-2016 SHALO_RS12210 da1a53e71f1906e9d214ad435dd10040 93 Pfam PF00203 Ribosomal protein S19 3 83 1.6E-35 T 11-11-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_RS12210 da1a53e71f1906e9d214ad435dd10040 93 Gene3D G3DSA:3.30.860.10 1 89 1.6E-39 T 11-11-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_RS12210 da1a53e71f1906e9d214ad435dd10040 93 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 3.5E-21 T 11-11-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_RS12210 da1a53e71f1906e9d214ad435dd10040 93 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 3.5E-21 T 11-11-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_RS12210 da1a53e71f1906e9d214ad435dd10040 93 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 3.5E-21 T 11-11-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_RS12210 da1a53e71f1906e9d214ad435dd10040 93 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 89 6.3E-44 T 11-11-2016 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 SHALO_RS12210 da1a53e71f1906e9d214ad435dd10040 93 SUPERFAMILY SSF54570 3 84 3.79E-34 T 11-11-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_RS12210 da1a53e71f1906e9d214ad435dd10040 93 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 24.127 T 11-11-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_RS12210 da1a53e71f1906e9d214ad435dd10040 93 PIRSF PIRSF002144 1 93 1.3E-31 T 11-11-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_RS11000 b40e8d8c49256ae197e0206f5ea8ccd9 266 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 1 266 47.049 T 11-11-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 SHALO_RS11000 b40e8d8c49256ae197e0206f5ea8ccd9 266 SUPERFAMILY SSF51569 2 265 5.86E-89 T 11-11-2016 SHALO_RS11000 b40e8d8c49256ae197e0206f5ea8ccd9 266 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 2 264 5.1E-113 T 11-11-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 SHALO_RS11000 b40e8d8c49256ae197e0206f5ea8ccd9 266 Pfam PF00793 DAHP synthetase I family 2 252 2.3E-58 T 11-11-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 SHALO_RS11000 b40e8d8c49256ae197e0206f5ea8ccd9 266 Gene3D G3DSA:3.20.20.70 2 265 4.4E-114 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_RS04575 f9a0cfb618103d776bec33e5ac6cd8a9 459 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 32 126 8.4E-19 T 11-11-2016 IPR029095 NarX-like, N-terminal SHALO_RS15155 8967fac78e25069c1ecb3cd04b23f8cb 832 SUPERFAMILY SSF117143 91 310 1.7E-27 T 11-11-2016 SHALO_RS15155 8967fac78e25069c1ecb3cd04b23f8cb 832 TIGRFAM TIGR02489 flgE_epsilon: flagellar hook protein FlgE 1 831 8.9E-225 T 11-11-2016 IPR012835 Flagellar hook FlgE GO:0009288|GO:0044781 SHALO_RS15155 8967fac78e25069c1ecb3cd04b23f8cb 832 Pfam PF00460 Flagella basal body rod protein 5 35 6.0E-12 T 11-11-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 SHALO_RS15155 8967fac78e25069c1ecb3cd04b23f8cb 832 SUPERFAMILY SSF117143 584 793 6.8E-42 T 11-11-2016 SHALO_RS15155 8967fac78e25069c1ecb3cd04b23f8cb 832 SUPERFAMILY SSF117143 510 547 6.8E-42 T 11-11-2016 SHALO_RS15155 8967fac78e25069c1ecb3cd04b23f8cb 832 Pfam PF07559 Flagellar basal body protein FlaE 595 713 2.2E-16 T 11-11-2016 IPR011491 Flagellar hook protein FlgE SHALO_RS15155 8967fac78e25069c1ecb3cd04b23f8cb 832 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 754 831 5.5E-19 T 11-11-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain SHALO_RS15155 8967fac78e25069c1ecb3cd04b23f8cb 832 Pfam PF07196 Flagellin hook IN motif 280 335 1.0E-6 T 11-11-2016 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 SHALO_RS15155 8967fac78e25069c1ecb3cd04b23f8cb 832 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 558 814 6.7E-42 T 11-11-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G SHALO_RS15155 8967fac78e25069c1ecb3cd04b23f8cb 832 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 3 315 1.0E-35 T 11-11-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G SHALO_RS11170 1dc57a373ca5ca10b742ee5e7e51ba07 257 TIGRFAM TIGR02623 G1P_cyt_trans: glucose-1-phosphate cytidylyltransferase 1 257 3.1E-128 T 11-11-2016 IPR013446 Glucose-1-phosphate cytidylyltransferase GO:0047343 KEGG: 00500+2.7.7.33|KEGG: 00520+2.7.7.33|MetaCyc: PWY-5833|MetaCyc: PWY-5940 SHALO_RS11170 1dc57a373ca5ca10b742ee5e7e51ba07 257 SUPERFAMILY SSF53448 1 257 2.7E-67 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases SHALO_RS11170 1dc57a373ca5ca10b742ee5e7e51ba07 257 Pfam PF00483 Nucleotidyl transferase 3 202 8.8E-19 T 11-11-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 SHALO_RS11170 1dc57a373ca5ca10b742ee5e7e51ba07 257 Gene3D G3DSA:3.90.550.10 1 256 6.7E-67 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases SHALO_RS00915 3134871728d2ac1c4a17f27ba0d34980 522 Gene3D G3DSA:3.40.50.980 8 176 3.6E-44 T 11-11-2016 SHALO_RS00915 3134871728d2ac1c4a17f27ba0d34980 522 Gene3D G3DSA:3.30.300.30 413 512 1.9E-28 T 11-11-2016 SHALO_RS00915 3134871728d2ac1c4a17f27ba0d34980 522 Gene3D G3DSA:2.30.38.10 336 409 1.2E-24 T 11-11-2016 SHALO_RS00915 3134871728d2ac1c4a17f27ba0d34980 522 SUPERFAMILY SSF56801 6 515 1.05E-142 T 11-11-2016 SHALO_RS00915 3134871728d2ac1c4a17f27ba0d34980 522 PRINTS PR00154 AMP-binding signature 178 186 8.7E-5 T 11-11-2016 IPR020459 AMP-binding SHALO_RS00915 3134871728d2ac1c4a17f27ba0d34980 522 PRINTS PR00154 AMP-binding signature 166 177 8.7E-5 T 11-11-2016 IPR020459 AMP-binding SHALO_RS00915 3134871728d2ac1c4a17f27ba0d34980 522 Gene3D G3DSA:3.40.50.980 177 335 1.0E-38 T 11-11-2016 SHALO_RS00915 3134871728d2ac1c4a17f27ba0d34980 522 ProSitePatterns PS00455 Putative AMP-binding domain signature. 171 182 - T 11-11-2016 IPR020845 AMP-binding, conserved site SHALO_RS00915 3134871728d2ac1c4a17f27ba0d34980 522 Pfam PF13193 AMP-binding enzyme C-terminal domain 427 503 3.1E-16 T 11-11-2016 IPR025110 AMP-binding enzyme C-terminal domain SHALO_RS00915 3134871728d2ac1c4a17f27ba0d34980 522 Pfam PF00501 AMP-binding enzyme 14 418 4.4E-103 T 11-11-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 SHALO_RS00715 5bccc1be007cd27dc0b9c8f60d0f544a 98 Gene3D G3DSA:1.10.760.10 18 98 5.4E-18 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS00715 5bccc1be007cd27dc0b9c8f60d0f544a 98 Pfam PF00034 Cytochrome c 18 98 9.9E-9 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS00715 5bccc1be007cd27dc0b9c8f60d0f544a 98 SUPERFAMILY SSF46626 10 97 2.54E-15 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS07450 6814af7f6bc3b020b7aeb26ec1657384 318 Gene3D G3DSA:2.40.160.10 9 318 1.7E-34 T 11-11-2016 IPR023614 Porin domain SHALO_RS07450 6814af7f6bc3b020b7aeb26ec1657384 318 Pfam PF03573 outer membrane porin, OprD family 22 317 3.1E-13 T 11-11-2016 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 SHALO_RS06895 1d30148b10aa2d32450cc5720d5eb2ea 614 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 5 424 8.6E-87 T 11-11-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 SHALO_RS06895 1d30148b10aa2d32450cc5720d5eb2ea 614 SUPERFAMILY SSF64518 110 509 1.44E-10 T 11-11-2016 SHALO_RS06895 1d30148b10aa2d32450cc5720d5eb2ea 614 SUPERFAMILY SSF64518 536 611 1.44E-10 T 11-11-2016 SHALO_RS06895 1d30148b10aa2d32450cc5720d5eb2ea 614 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 552 611 8.9E-15 T 11-11-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain SHALO_RS06895 1d30148b10aa2d32450cc5720d5eb2ea 614 PRINTS PR01005 Flagellar hook-associated protein signature 126 146 1.5E-11 T 11-11-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 SHALO_RS06895 1d30148b10aa2d32450cc5720d5eb2ea 614 PRINTS PR01005 Flagellar hook-associated protein signature 51 73 1.5E-11 T 11-11-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 SHALO_RS06895 1d30148b10aa2d32450cc5720d5eb2ea 614 PRINTS PR01005 Flagellar hook-associated protein signature 159 183 1.5E-11 T 11-11-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 SHALO_RS06895 1d30148b10aa2d32450cc5720d5eb2ea 614 PRINTS PR01005 Flagellar hook-associated protein signature 13 36 1.5E-11 T 11-11-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 SHALO_RS06895 1d30148b10aa2d32450cc5720d5eb2ea 614 Pfam PF00460 Flagella basal body rod protein 7 34 8.3E-5 T 11-11-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 SHALO_RS04060 81dbaf270c4a6f42851723d4433b29e6 268 Gene3D G3DSA:2.40.50.100 157 188 3.8E-14 T 11-11-2016 SHALO_RS04060 81dbaf270c4a6f42851723d4433b29e6 268 Gene3D G3DSA:2.40.50.100 35 68 3.8E-14 T 11-11-2016 SHALO_RS04060 81dbaf270c4a6f42851723d4433b29e6 268 SUPERFAMILY SSF111369 25 266 6.8E-18 T 11-11-2016 SHALO_RS04060 81dbaf270c4a6f42851723d4433b29e6 268 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 33 262 3.4E-26 T 11-11-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SHALO_RS04060 81dbaf270c4a6f42851723d4433b29e6 268 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 22 266 6.8E-32 T 11-11-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 SHALO_RS00545 2bfb550720c152521f4637277542efc7 667 Gene3D G3DSA:3.60.15.10 115 367 2.7E-76 T 11-11-2016 IPR001279 Metallo-beta-lactamase SHALO_RS00545 2bfb550720c152521f4637277542efc7 667 Pfam PF00753 Metallo-beta-lactamase superfamily 128 278 9.7E-12 T 11-11-2016 IPR001279 Metallo-beta-lactamase SHALO_RS00545 2bfb550720c152521f4637277542efc7 667 SUPERFAMILY SSF56281 119 535 1.26E-85 T 11-11-2016 IPR001279 Metallo-beta-lactamase SHALO_RS00545 2bfb550720c152521f4637277542efc7 667 TIGRFAM TIGR00649 MG423: beta-CASP ribonuclease, RNase J family 119 664 1.3E-191 T 11-11-2016 IPR004613 Ribonuclease J GO:0003723|GO:0046872 SHALO_RS00545 2bfb550720c152521f4637277542efc7 667 SMART SM00849 131 327 6.9E-18 T 11-11-2016 IPR001279 Metallo-beta-lactamase SHALO_RS00545 2bfb550720c152521f4637277542efc7 667 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 472 520 3.4E-10 T 11-11-2016 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain SHALO_RS00545 2bfb550720c152521f4637277542efc7 667 Hamap MF_01491 Ribonuclease J [rnj]. 114 667 41.623 T 11-11-2016 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 SHALO_RS11545 859ee39ea78bcbe1da723f0422d6bcdb 232 Pfam PF03649 Uncharacterised protein family (UPF0014) 16 154 1.2E-32 T 11-11-2016 IPR005226 UPF0014 family SHALO_RS11545 859ee39ea78bcbe1da723f0422d6bcdb 232 Pfam PF03649 Uncharacterised protein family (UPF0014) 152 225 2.3E-25 T 11-11-2016 IPR005226 UPF0014 family SHALO_RS10975 5de76ed8390f931d398f7b27ec28127e 227 SUPERFAMILY SSF51366 2 225 2.95E-56 T 11-11-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 SHALO_RS10975 5de76ed8390f931d398f7b27ec28127e 227 Gene3D G3DSA:3.20.20.70 2 226 2.9E-70 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_RS10975 5de76ed8390f931d398f7b27ec28127e 227 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 56 69 - T 11-11-2016 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|Reactome: R-HSA-500753 SHALO_RS10975 5de76ed8390f931d398f7b27ec28127e 227 SMART SM00934 2 223 7.4E-72 T 11-11-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|Reactome: R-HSA-500753 SHALO_RS10975 5de76ed8390f931d398f7b27ec28127e 227 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 3 223 8.0E-58 T 11-11-2016 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|Reactome: R-HSA-500753 SHALO_RS10975 5de76ed8390f931d398f7b27ec28127e 227 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 1 222 3.2E-42 T 11-11-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|Reactome: R-HSA-500753 SHALO_RS07115 64fdda4ca13114e40662e9691fadfb20 334 Pfam PF00586 AIR synthase related protein, N-terminal domain 37 149 4.7E-18 T 11-11-2016 IPR016188 PurM-like, N-terminal domain SHALO_RS07115 64fdda4ca13114e40662e9691fadfb20 334 Pfam PF02769 AIR synthase related protein, C-terminal domain 161 310 1.5E-25 T 11-11-2016 IPR010918 AIR synthase-related protein, C-terminal domain SHALO_RS07115 64fdda4ca13114e40662e9691fadfb20 334 TIGRFAM TIGR02124 hypE: hydrogenase expression/formation protein HypE 4 334 1.5E-139 T 11-11-2016 IPR011854 Hydrogenase expression/formation protein HypE SHALO_RS07115 64fdda4ca13114e40662e9691fadfb20 334 SUPERFAMILY SSF55326 3 150 5.06E-33 T 11-11-2016 SHALO_RS07115 64fdda4ca13114e40662e9691fadfb20 334 Gene3D G3DSA:3.30.1330.10 18 150 1.4E-22 T 11-11-2016 IPR016188 PurM-like, N-terminal domain SHALO_RS07115 64fdda4ca13114e40662e9691fadfb20 334 PIRSF PIRSF005644 1 334 1.3E-125 T 11-11-2016 IPR011854 Hydrogenase expression/formation protein HypE SHALO_RS07115 64fdda4ca13114e40662e9691fadfb20 334 SUPERFAMILY SSF56042 155 329 1.41E-39 T 11-11-2016 IPR010918 AIR synthase-related protein, C-terminal domain SHALO_RS07115 64fdda4ca13114e40662e9691fadfb20 334 Gene3D G3DSA:3.90.650.10 158 320 5.4E-26 T 11-11-2016 IPR010918 AIR synthase-related protein, C-terminal domain SHALO_RS01985 755d3be6314ac084341f582bf07026a5 274 Pfam PF14358 Domain of unknown function (DUF4405) 7 73 9.1E-15 T 11-11-2016 IPR025517 Domain of unknown function DUF4405 SHALO_RS00605 a1766c5f06e660ca42ebfafff79841a5 91 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 12 88 2.0E-19 T 11-11-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_RS00605 a1766c5f06e660ca42ebfafff79841a5 91 Pfam PF01649 Ribosomal protein S20 2 84 1.2E-25 T 11-11-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_RS00605 a1766c5f06e660ca42ebfafff79841a5 91 Gene3D G3DSA:1.20.58.110 1 86 5.9E-28 T 11-11-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_RS00605 a1766c5f06e660ca42ebfafff79841a5 91 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 15.751 T 11-11-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_RS00605 a1766c5f06e660ca42ebfafff79841a5 91 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 85 1.4E-26 T 11-11-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_RS00605 a1766c5f06e660ca42ebfafff79841a5 91 SUPERFAMILY SSF46992 3 86 1.02E-26 T 11-11-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_RS14275 989370af436d60088d00d7ea42baa7de 220 SMART SM00862 146 217 1.5E-14 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS14275 989370af436d60088d00d7ea42baa7de 220 Gene3D G3DSA:3.40.50.2300 1 122 4.0E-33 T 11-11-2016 SHALO_RS14275 989370af436d60088d00d7ea42baa7de 220 Gene3D G3DSA:1.10.10.10 132 218 1.4E-19 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS14275 989370af436d60088d00d7ea42baa7de 220 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 217 3.3E-16 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS14275 989370af436d60088d00d7ea42baa7de 220 SUPERFAMILY SSF52172 1 170 2.56E-36 T 11-11-2016 IPR011006 CheY-like superfamily SHALO_RS14275 989370af436d60088d00d7ea42baa7de 220 SMART SM00448 1 112 1.4E-34 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS14275 989370af436d60088d00d7ea42baa7de 220 Pfam PF00072 Response regulator receiver domain 3 112 9.4E-27 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS05470 af34cbbe50e90862c3fdf55f2fd203f6 203 SUPERFAMILY SSF53098 28 199 1.12E-39 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SHALO_RS05470 af34cbbe50e90862c3fdf55f2fd203f6 203 Pfam PF00929 Exonuclease 32 192 8.4E-24 T 11-11-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III SHALO_RS05470 af34cbbe50e90862c3fdf55f2fd203f6 203 Gene3D G3DSA:3.30.420.10 28 199 2.8E-39 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SHALO_RS05470 af34cbbe50e90862c3fdf55f2fd203f6 203 SMART SM00479 30 203 1.1E-30 T 11-11-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III SHALO_RS03305 451ad120516f8f5d8c620ca4ef1d2269 221 Gene3D G3DSA:3.40.50.720 6 206 1.7E-43 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS03305 451ad120516f8f5d8c620ca4ef1d2269 221 Pfam PF00899 ThiF family 6 191 6.4E-40 T 11-11-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 SHALO_RS03305 451ad120516f8f5d8c620ca4ef1d2269 221 SUPERFAMILY SSF69572 4 210 3.92E-53 T 11-11-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 SHALO_RS14340 699adf606dfaf7bf31100132e174a250 760 SUPERFAMILY SSF64307 687 759 1.31E-17 T 11-11-2016 IPR001455 TusA-like domain SHALO_RS14340 699adf606dfaf7bf31100132e174a250 760 Gene3D G3DSA:3.30.413.10 120 270 7.9E-34 T 11-11-2016 SHALO_RS14340 699adf606dfaf7bf31100132e174a250 760 SUPERFAMILY SSF56014 120 276 3.14E-40 T 11-11-2016 SHALO_RS14340 699adf606dfaf7bf31100132e174a250 760 Pfam PF01206 Sulfurtransferase TusA 693 759 1.0E-16 T 11-11-2016 IPR001455 TusA-like domain SHALO_RS14340 699adf606dfaf7bf31100132e174a250 760 SUPERFAMILY SSF55124 13 116 9.0E-25 T 11-11-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 SHALO_RS14340 699adf606dfaf7bf31100132e174a250 760 SUPERFAMILY SSF55124 251 402 9.0E-13 T 11-11-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 SHALO_RS14340 699adf606dfaf7bf31100132e174a250 760 Gene3D G3DSA:3.90.480.10 48 117 7.1E-28 T 11-11-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 SHALO_RS14340 699adf606dfaf7bf31100132e174a250 760 Gene3D G3DSA:3.90.480.10 307 379 7.1E-28 T 11-11-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 SHALO_RS14340 699adf606dfaf7bf31100132e174a250 760 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 394 533 6.8E-10 T 11-11-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 SHALO_RS14340 699adf606dfaf7bf31100132e174a250 760 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 120 270 8.1E-33 T 11-11-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 SHALO_RS14340 699adf606dfaf7bf31100132e174a250 760 Gene3D G3DSA:3.30.110.40 675 760 3.7E-19 T 11-11-2016 IPR001455 TusA-like domain SHALO_RS14340 699adf606dfaf7bf31100132e174a250 760 PRINTS PR00397 Sirohaem Fe-binding site signature 440 458 1.1E-5 T 11-11-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 SHALO_RS14340 699adf606dfaf7bf31100132e174a250 760 PRINTS PR00397 Sirohaem Fe-binding site signature 391 409 1.1E-5 T 11-11-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 SHALO_RS14340 699adf606dfaf7bf31100132e174a250 760 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 45 109 1.3E-15 T 11-11-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 SHALO_RS14340 699adf606dfaf7bf31100132e174a250 760 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 314 378 3.3E-7 T 11-11-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 SHALO_RS14340 699adf606dfaf7bf31100132e174a250 760 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 440 456 - T 11-11-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 SHALO_RS14340 699adf606dfaf7bf31100132e174a250 760 Gene3D G3DSA:3.30.413.10 392 531 1.2E-24 T 11-11-2016 SHALO_RS14340 699adf606dfaf7bf31100132e174a250 760 SUPERFAMILY SSF56014 391 553 2.75E-26 T 11-11-2016 SHALO_RS10950 61c9d8abffcd939c7a466afadb16d209 120 ProSitePatterns PS00550 Hemerythrin family signature. 42 65 - T 11-11-2016 IPR016131 Haemerythrin, iron-binding site GO:0046872 SHALO_RS10950 61c9d8abffcd939c7a466afadb16d209 120 Gene3D G3DSA:1.20.120.50 2 113 1.4E-15 T 11-11-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 SHALO_RS10950 61c9d8abffcd939c7a466afadb16d209 120 SUPERFAMILY SSF47188 2 113 1.31E-16 T 11-11-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 SHALO_RS01290 cc0e927a1bbb22c07c42ea276aa55edb 191 Pfam PF01195 Peptidyl-tRNA hydrolase 3 175 2.5E-53 T 11-11-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 SHALO_RS01290 cc0e927a1bbb22c07c42ea276aa55edb 191 SUPERFAMILY SSF53178 1 176 1.05E-57 T 11-11-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 SHALO_RS01290 cc0e927a1bbb22c07c42ea276aa55edb 191 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 14 27 - T 11-11-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 SHALO_RS01290 cc0e927a1bbb22c07c42ea276aa55edb 191 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 1 174 2.9E-52 T 11-11-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 SHALO_RS01290 cc0e927a1bbb22c07c42ea276aa55edb 191 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 103 113 - T 11-11-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 SHALO_RS01290 cc0e927a1bbb22c07c42ea276aa55edb 191 Gene3D G3DSA:3.40.50.1470 1 179 2.8E-60 T 11-11-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 SHALO_RS01290 cc0e927a1bbb22c07c42ea276aa55edb 191 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 1 173 33.315 T 11-11-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 SHALO_RS01415 128172ce98addd2d7008bef9bc0410e0 408 SMART SM00388 188 254 1.5E-4 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS01415 128172ce98addd2d7008bef9bc0410e0 408 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 402 2.6E-7 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS01415 128172ce98addd2d7008bef9bc0410e0 408 PRINTS PR00344 Bacterial sensor protein C-terminal signature 364 382 2.6E-7 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS01415 128172ce98addd2d7008bef9bc0410e0 408 PRINTS PR00344 Bacterial sensor protein C-terminal signature 336 350 2.6E-7 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS01415 128172ce98addd2d7008bef9bc0410e0 408 PRINTS PR00344 Bacterial sensor protein C-terminal signature 352 362 2.6E-7 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS01415 128172ce98addd2d7008bef9bc0410e0 408 SMART SM00387 299 405 3.8E-22 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS01415 128172ce98addd2d7008bef9bc0410e0 408 SUPERFAMILY SSF55874 253 403 3.01E-26 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS01415 128172ce98addd2d7008bef9bc0410e0 408 Pfam PF00512 His Kinase A (phospho-acceptor) domain 189 253 1.2E-7 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS01415 128172ce98addd2d7008bef9bc0410e0 408 Gene3D G3DSA:3.30.565.10 260 404 7.5E-26 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS01415 128172ce98addd2d7008bef9bc0410e0 408 Gene3D G3DSA:1.10.287.130 180 249 1.1E-8 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS01415 128172ce98addd2d7008bef9bc0410e0 408 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 303 404 2.5E-15 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS01415 128172ce98addd2d7008bef9bc0410e0 408 SUPERFAMILY SSF47384 173 252 6.28E-11 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS13185 105840ddb17d26c0bdbe624ac336e7b3 116 Gene3D G3DSA:1.10.10.10 17 114 1.3E-33 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS13185 105840ddb17d26c0bdbe624ac336e7b3 116 SUPERFAMILY SSF46785 19 112 1.19E-27 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS13185 105840ddb17d26c0bdbe624ac336e7b3 116 Pfam PF01638 HxlR-like helix-turn-helix 26 115 1.3E-26 T 11-11-2016 IPR002577 Helix-turn-helix, HxlR type SHALO_RS08800 83c5c257de55425bb731877aa52527e2 112 Pfam PF01809 Haemolytic domain 4 67 2.7E-20 T 11-11-2016 IPR002696 Putative membrane protein insertion efficiency factor SHALO_RS08800 83c5c257de55425bb731877aa52527e2 112 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 1 69 17.99 T 11-11-2016 IPR002696 Putative membrane protein insertion efficiency factor SHALO_RS08800 83c5c257de55425bb731877aa52527e2 112 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 23 65 3.0E-10 T 11-11-2016 IPR002696 Putative membrane protein insertion efficiency factor SHALO_RS08800 83c5c257de55425bb731877aa52527e2 112 SMART SM01234 1 68 2.6E-25 T 11-11-2016 IPR002696 Putative membrane protein insertion efficiency factor SHALO_RS08800 83c5c257de55425bb731877aa52527e2 112 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 6 73 1.3E-22 T 11-11-2016 IPR002696 Putative membrane protein insertion efficiency factor SHALO_RS01460 3b8cc5ce954b9c12efbfbbfb34d9dd9c 197 Gene3D G3DSA:2.160.20.70 85 195 3.0E-12 T 11-11-2016 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 SHALO_RS01460 3b8cc5ce954b9c12efbfbbfb34d9dd9c 197 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 102 147 1.0E-8 T 11-11-2016 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 SHALO_RS01460 3b8cc5ce954b9c12efbfbbfb34d9dd9c 197 SUPERFAMILY SSF63848 99 195 2.22E-11 T 11-11-2016 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 SHALO_RS11310 8b05342bb5042c52c20fdef2605cc3da 389 SUPERFAMILY SSF109604 20 177 8.38E-20 T 11-11-2016 SHALO_RS11310 8b05342bb5042c52c20fdef2605cc3da 389 SMART SM00471 236 364 4.4 T 11-11-2016 IPR003607 HD/PDEase domain SHALO_RS11310 8b05342bb5042c52c20fdef2605cc3da 389 SMART SM00471 21 149 0.0053 T 11-11-2016 IPR003607 HD/PDEase domain SHALO_RS11310 8b05342bb5042c52c20fdef2605cc3da 389 SUPERFAMILY SSF109604 236 352 3.87E-12 T 11-11-2016 SHALO_RS11310 8b05342bb5042c52c20fdef2605cc3da 389 Gene3D G3DSA:1.10.3210.10 236 369 1.5E-10 T 11-11-2016 IPR006674 HD domain SHALO_RS11310 8b05342bb5042c52c20fdef2605cc3da 389 Gene3D G3DSA:1.10.3210.10 12 187 2.3E-21 T 11-11-2016 IPR006674 HD domain SHALO_RS11310 8b05342bb5042c52c20fdef2605cc3da 389 Pfam PF01966 HD domain 28 139 5.6E-12 T 11-11-2016 IPR006674 HD domain SHALO_RS11310 8b05342bb5042c52c20fdef2605cc3da 389 Pfam PF01966 HD domain 234 349 7.6E-11 T 11-11-2016 IPR006674 HD domain SHALO_RS04805 b2b4782956897ef1939993b8419574c9 178 Pfam PF08447 PAS fold 30 109 9.7E-16 T 11-11-2016 IPR013655 PAS fold-3 GO:0005515 SHALO_RS04805 b2b4782956897ef1939993b8419574c9 178 Gene3D G3DSA:3.30.450.20 20 108 1.1E-21 T 11-11-2016 SHALO_RS04805 b2b4782956897ef1939993b8419574c9 178 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 23 103 1.0E-14 T 11-11-2016 IPR000014 PAS domain SHALO_RS04805 b2b4782956897ef1939993b8419574c9 178 SMART SM00091 6 73 1.2E-5 T 11-11-2016 IPR000014 PAS domain SHALO_RS04805 b2b4782956897ef1939993b8419574c9 178 SUPERFAMILY SSF55785 19 107 2.58E-25 T 11-11-2016 IPR000014 PAS domain SHALO_RS14480 2e90872f255e6da31b8465cd4d5a1840 278 Pfam PF03916 Polysulphide reductase, NrfD 2 277 2.5E-22 T 11-11-2016 IPR005614 NrfD family SHALO_RS06065 db6abfdeb154535c40a0e9ade160919f 125 SUPERFAMILY SSF54862 1 88 9.08E-14 T 11-11-2016 SHALO_RS06065 db6abfdeb154535c40a0e9ade160919f 125 Pfam PF13187 4Fe-4S dicluster domain 9 64 2.2E-7 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_RS06065 db6abfdeb154535c40a0e9ade160919f 125 Gene3D G3DSA:3.30.70.20 5 68 2.3E-13 T 11-11-2016 SHALO_RS06065 db6abfdeb154535c40a0e9ade160919f 125 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_RS05735 49bc6656b2b83c0d3d9f51c2736bdb87 344 Pfam PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase 59 281 5.5E-13 T 11-11-2016 IPR003788 Putative S-adenosyl-L-methionine-dependent methyltransferase MidA Reactome: R-HSA-6799198 SHALO_RS05735 49bc6656b2b83c0d3d9f51c2736bdb87 344 SUPERFAMILY SSF53335 2 339 1.16E-60 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS10060 565f71f625d5c572ace0e7e7af4037c4 91 Pfam PF02699 Preprotein translocase subunit 10 87 2.0E-30 T 11-11-2016 IPR003849 Preprotein translocase YajC SHALO_RS10060 565f71f625d5c572ace0e7e7af4037c4 91 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 7 89 5.4E-31 T 11-11-2016 IPR003849 Preprotein translocase YajC SHALO_RS10060 565f71f625d5c572ace0e7e7af4037c4 91 PRINTS PR01853 Bacterial YajC preprotein translocase signature 8 28 7.9E-17 T 11-11-2016 IPR003849 Preprotein translocase YajC SHALO_RS10060 565f71f625d5c572ace0e7e7af4037c4 91 PRINTS PR01853 Bacterial YajC preprotein translocase signature 28 46 7.9E-17 T 11-11-2016 IPR003849 Preprotein translocase YajC SHALO_RS10060 565f71f625d5c572ace0e7e7af4037c4 91 SMART SM01323 6 89 2.0E-42 T 11-11-2016 IPR003849 Preprotein translocase YajC SHALO_RS11835 28c90b80023e5557ebb945974a2da854 222 Gene3D G3DSA:1.20.58.220 2 98 1.9E-8 T 11-11-2016 SHALO_RS11835 28c90b80023e5557ebb945974a2da854 222 SUPERFAMILY SSF109755 5 216 1.78E-22 T 11-11-2016 SHALO_RS11835 28c90b80023e5557ebb945974a2da854 222 Gene3D G3DSA:1.20.58.220 115 216 2.0E-10 T 11-11-2016 SHALO_RS11835 28c90b80023e5557ebb945974a2da854 222 Pfam PF01895 PhoU domain 124 209 2.9E-7 T 11-11-2016 IPR026022 PhoU domain SHALO_RS05975 946fa04cfe7efe7103a94761368d537a 80 SMART SM00530 9 65 5.1E-8 T 11-11-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SHALO_RS05975 946fa04cfe7efe7103a94761368d537a 80 Gene3D G3DSA:1.10.260.40 5 63 1.1E-13 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SHALO_RS05975 946fa04cfe7efe7103a94761368d537a 80 Pfam PF12844 Helix-turn-helix domain 11 62 1.9E-12 T 11-11-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SHALO_RS05975 946fa04cfe7efe7103a94761368d537a 80 SUPERFAMILY SSF47413 6 64 5.63E-13 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SHALO_RS04440 1a758b1a5c61856bc0b1d84a216b3f07 547 Pfam PF01464 Transglycosylase SLT domain 388 482 3.1E-15 T 11-11-2016 IPR008258 Transglycosylase SLT domain 1 SHALO_RS04440 1a758b1a5c61856bc0b1d84a216b3f07 547 Gene3D G3DSA:1.10.530.10 388 530 1.9E-27 T 11-11-2016 SHALO_RS04440 1a758b1a5c61856bc0b1d84a216b3f07 547 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 394 422 - T 11-11-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 SHALO_RS04440 1a758b1a5c61856bc0b1d84a216b3f07 547 SUPERFAMILY SSF53955 388 534 9.57E-28 T 11-11-2016 IPR023346 Lysozyme-like domain SHALO_RS11770 b03695c468e3185f2cc112e2e76dc9e0 257 SUPERFAMILY SSF52151 6 202 4.71E-40 T 11-11-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 SHALO_RS11770 b03695c468e3185f2cc112e2e76dc9e0 257 Pfam PF01734 Patatin-like phospholipase 9 166 6.4E-13 T 11-11-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 SHALO_RS11770 b03695c468e3185f2cc112e2e76dc9e0 257 Gene3D G3DSA:3.40.1090.10 9 163 1.9E-11 T 11-11-2016 SHALO_RS05490 332a470c006103306b0c510c866aefda 283 Hamap MF_00188 Protease HtpX [htpX]. 3 278 27.988 T 11-11-2016 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 SHALO_RS05490 332a470c006103306b0c510c866aefda 283 Pfam PF01435 Peptidase family M48 72 278 5.8E-39 T 11-11-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 SHALO_RS05490 332a470c006103306b0c510c866aefda 283 Gene3D G3DSA:3.30.2010.10 56 146 5.0E-32 T 11-11-2016 SHALO_RS02265 a9e396ae87318de68da95616bf66e7fd 434 Gene3D G3DSA:3.20.20.450 198 431 1.8E-59 T 11-11-2016 IPR001633 EAL domain SHALO_RS02265 a9e396ae87318de68da95616bf66e7fd 434 SMART SM00267 22 182 3.1E-7 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS02265 a9e396ae87318de68da95616bf66e7fd 434 Pfam PF00563 EAL domain 209 428 2.2E-55 T 11-11-2016 IPR001633 EAL domain SHALO_RS02265 a9e396ae87318de68da95616bf66e7fd 434 Gene3D G3DSA:3.30.70.270 34 186 4.2E-20 T 11-11-2016 SHALO_RS02265 a9e396ae87318de68da95616bf66e7fd 434 Pfam PF00990 Diguanylate cyclase, GGDEF domain 34 173 4.0E-15 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS02265 a9e396ae87318de68da95616bf66e7fd 434 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 33 139 5.7E-14 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS02265 a9e396ae87318de68da95616bf66e7fd 434 SUPERFAMILY SSF141868 209 431 6.02E-61 T 11-11-2016 IPR001633 EAL domain SHALO_RS02265 a9e396ae87318de68da95616bf66e7fd 434 SUPERFAMILY SSF55073 38 178 8.63E-19 T 11-11-2016 IPR029787 Nucleotide cyclase SHALO_RS02265 a9e396ae87318de68da95616bf66e7fd 434 SMART SM00052 193 433 9.5E-45 T 11-11-2016 IPR001633 EAL domain SHALO_RS02690 f11724e1a0304ebc0dcebe5f39e1c8f5 420 Pfam PF13534 4Fe-4S dicluster domain 10 77 1.1E-8 T 11-11-2016 SHALO_RS02690 f11724e1a0304ebc0dcebe5f39e1c8f5 420 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 62 73 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_RS02690 f11724e1a0304ebc0dcebe5f39e1c8f5 420 PIRSF PIRSF000139 1 420 2.1E-119 T 11-11-2016 IPR012257 Glycolate oxidase, iron-sulphur subunit SHALO_RS02690 f11724e1a0304ebc0dcebe5f39e1c8f5 420 SUPERFAMILY SSF46548 8 91 7.15E-16 T 11-11-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 SHALO_RS02690 f11724e1a0304ebc0dcebe5f39e1c8f5 420 Gene3D G3DSA:1.10.1060.10 9 94 3.1E-15 T 11-11-2016 SHALO_RS02690 f11724e1a0304ebc0dcebe5f39e1c8f5 420 Pfam PF02754 Cysteine-rich domain 174 259 1.4E-13 T 11-11-2016 IPR004017 Cysteine-rich domain SHALO_RS02690 f11724e1a0304ebc0dcebe5f39e1c8f5 420 Pfam PF02754 Cysteine-rich domain 310 393 1.4E-11 T 11-11-2016 IPR004017 Cysteine-rich domain SHALO_RS10080 d1a17aaa11cd734ec93e1303fd16bea8 226 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 35 221 1.5E-56 T 11-11-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 SHALO_RS10080 d1a17aaa11cd734ec93e1303fd16bea8 226 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 37 204 4.2E-66 T 11-11-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 SHALO_RS10080 d1a17aaa11cd734ec93e1303fd16bea8 226 SUPERFAMILY SSF55729 7 220 1.85E-80 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase SHALO_RS10080 d1a17aaa11cd734ec93e1303fd16bea8 226 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 226 78.856 T 11-11-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 SHALO_RS03565 bfc7e2a1c7e557374489ca67fba85008 103 SUPERFAMILY SSF101801 18 93 2.88E-21 T 11-11-2016 IPR001543 Surface presentation of antigen (SpoA) SHALO_RS03565 bfc7e2a1c7e557374489ca67fba85008 103 PRINTS PR00956 Flagellar motor switch protein FliN signature 36 52 1.2E-21 T 11-11-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 SHALO_RS03565 bfc7e2a1c7e557374489ca67fba85008 103 PRINTS PR00956 Flagellar motor switch protein FliN signature 19 35 1.2E-21 T 11-11-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 SHALO_RS03565 bfc7e2a1c7e557374489ca67fba85008 103 PRINTS PR00956 Flagellar motor switch protein FliN signature 52 65 1.2E-21 T 11-11-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 SHALO_RS03565 bfc7e2a1c7e557374489ca67fba85008 103 PRINTS PR00956 Flagellar motor switch protein FliN signature 65 80 1.2E-21 T 11-11-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 SHALO_RS03565 bfc7e2a1c7e557374489ca67fba85008 103 Gene3D G3DSA:2.30.330.10 18 98 2.7E-27 T 11-11-2016 SHALO_RS03565 bfc7e2a1c7e557374489ca67fba85008 103 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 19 91 1.2E-25 T 11-11-2016 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 SHALO_RS03565 bfc7e2a1c7e557374489ca67fba85008 103 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 19 90 2.2E-23 T 11-11-2016 IPR001543 Surface presentation of antigen (SpoA) SHALO_RS05165 caeb9d12797a543713642dc2b0d3a995 262 Pfam PF04471 Restriction endonuclease 10 85 3.6E-5 T 11-11-2016 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 SHALO_RS05165 caeb9d12797a543713642dc2b0d3a995 262 SUPERFAMILY SSF52980 14 125 8.04E-7 T 11-11-2016 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 SHALO_RS06650 f3c00b983173ec3a9a88c45cc9d9ac8b 361 SUPERFAMILY SSF55120 2 208 1.34E-84 T 11-11-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SHALO_RS06650 f3c00b983173ec3a9a88c45cc9d9ac8b 361 SUPERFAMILY SSF55120 238 358 1.34E-84 T 11-11-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SHALO_RS06650 f3c00b983173ec3a9a88c45cc9d9ac8b 361 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 183 355 1.5E-13 T 11-11-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 SHALO_RS06650 f3c00b983173ec3a9a88c45cc9d9ac8b 361 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 5 180 2.1E-40 T 11-11-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 SHALO_RS06650 f3c00b983173ec3a9a88c45cc9d9ac8b 361 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 1 361 26.464 T 11-11-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 SHALO_RS06650 f3c00b983173ec3a9a88c45cc9d9ac8b 361 TIGRFAM TIGR00094 tRNA_TruD_broad: tRNA pseudouridine synthase, TruD family 12 185 1.1E-51 T 11-11-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 SHALO_RS01745 61bf5c3b9a070c042c661c2dd8bd5bd7 168 SUPERFAMILY SSF160387 66 132 1.67E-7 T 11-11-2016 SHALO_RS10715 3384c4d927cef3d77d82141ab2422f5d 489 Pfam PF00361 Proton-conducting membrane transporter 126 417 4.3E-55 T 11-11-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS10715 3384c4d927cef3d77d82141ab2422f5d 489 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 66 91 5.0E-7 T 11-11-2016 SHALO_RS10715 3384c4d927cef3d77d82141ab2422f5d 489 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 312 324 5.0E-7 T 11-11-2016 SHALO_RS10715 3384c4d927cef3d77d82141ab2422f5d 489 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 219 240 5.0E-7 T 11-11-2016 SHALO_RS10715 3384c4d927cef3d77d82141ab2422f5d 489 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 63 110 1.6E-5 T 11-11-2016 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS08190 50e0fb4191f8efaed5ce24815b18084c 487 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 26 481 4.9E-115 T 11-11-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 SHALO_RS08190 50e0fb4191f8efaed5ce24815b18084c 487 Pfam PF00939 Sodium:sulfate symporter transmembrane region 7 487 5.8E-140 T 11-11-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 SHALO_RS08190 50e0fb4191f8efaed5ce24815b18084c 487 PIRSF PIRSF002457 1 487 1.2E-136 T 11-11-2016 IPR030676 Citrate carrier CitT-related SHALO_RS04590 661a362eb781f28b65aa4ef578415d9e 223 SMART SM00448 2 114 3.8E-35 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS04590 661a362eb781f28b65aa4ef578415d9e 223 SUPERFAMILY SSF52172 2 126 9.96E-34 T 11-11-2016 IPR011006 CheY-like superfamily SHALO_RS04590 661a362eb781f28b65aa4ef578415d9e 223 Pfam PF00072 Response regulator receiver domain 4 111 8.0E-23 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS04590 661a362eb781f28b65aa4ef578415d9e 223 Gene3D G3DSA:3.40.50.2300 1 145 1.4E-34 T 11-11-2016 SHALO_RS04590 661a362eb781f28b65aa4ef578415d9e 223 Gene3D G3DSA:1.10.10.10 146 221 5.7E-22 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS04590 661a362eb781f28b65aa4ef578415d9e 223 SMART SM00862 144 220 2.3E-16 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS04590 661a362eb781f28b65aa4ef578415d9e 223 SUPERFAMILY SSF46894 130 221 3.12E-19 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SHALO_RS04590 661a362eb781f28b65aa4ef578415d9e 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 220 8.2E-19 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS01445 0bd279ac1adf489bcc5cd143c4203549 352 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 5 350 4.4E-129 T 11-11-2016 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 SHALO_RS01445 0bd279ac1adf489bcc5cd143c4203549 352 SUPERFAMILY SSF160544 241 347 1.24E-41 T 11-11-2016 IPR029025 Type III secretion system substrate exporter, C-terminal SHALO_RS01445 0bd279ac1adf489bcc5cd143c4203549 352 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 205 223 1.3E-42 T 11-11-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 SHALO_RS01445 0bd279ac1adf489bcc5cd143c4203549 352 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 299 320 1.3E-42 T 11-11-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 SHALO_RS01445 0bd279ac1adf489bcc5cd143c4203549 352 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 269 284 1.3E-42 T 11-11-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 SHALO_RS01445 0bd279ac1adf489bcc5cd143c4203549 352 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 225 242 1.3E-42 T 11-11-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 SHALO_RS01445 0bd279ac1adf489bcc5cd143c4203549 352 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 8 30 1.3E-42 T 11-11-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 SHALO_RS01445 0bd279ac1adf489bcc5cd143c4203549 352 Gene3D G3DSA:3.40.1690.10 215 349 3.1E-60 T 11-11-2016 IPR029025 Type III secretion system substrate exporter, C-terminal SHALO_RS01445 0bd279ac1adf489bcc5cd143c4203549 352 Pfam PF01312 FlhB HrpN YscU SpaS Family 5 344 1.3E-122 T 11-11-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 SHALO_RS11875 92b3c4f515e59175fff594334dd584e4 390 Gene3D G3DSA:1.10.3720.10 35 56 4.6E-44 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHALO_RS11875 92b3c4f515e59175fff594334dd584e4 390 Gene3D G3DSA:1.10.3720.10 155 389 4.6E-44 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHALO_RS11875 92b3c4f515e59175fff594334dd584e4 390 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 188 386 1.3E-19 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHALO_RS11875 92b3c4f515e59175fff594334dd584e4 390 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 143 387 1.8E-67 T 11-11-2016 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 SHALO_RS11875 92b3c4f515e59175fff594334dd584e4 390 Pfam PF11812 Domain of unknown function (DUF3333) 82 131 1.2E-6 T 11-11-2016 IPR024573 Domain of unknown function DUF3333 SHALO_RS11875 92b3c4f515e59175fff594334dd584e4 390 Pfam PF11812 Domain of unknown function (DUF3333) 13 72 1.4E-13 T 11-11-2016 IPR024573 Domain of unknown function DUF3333 SHALO_RS11875 92b3c4f515e59175fff594334dd584e4 390 SUPERFAMILY SSF161098 158 376 2.88E-35 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHALO_RS05685 3f5b3c388f1696bbd17b05764b099e36 378 Pfam PF04748 Divergent polysaccharide deacetylase 172 378 5.8E-59 T 11-11-2016 IPR006837 Divergent polysaccharide deacetylase SHALO_RS05685 3f5b3c388f1696bbd17b05764b099e36 378 SUPERFAMILY SSF88713 168 378 3.11E-59 T 11-11-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 SHALO_RS05685 3f5b3c388f1696bbd17b05764b099e36 378 Gene3D G3DSA:3.20.20.370 167 378 8.2E-66 T 11-11-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 SHALO_RS01405 9c02e8f79b3dddc3e58404e3dc75de6f 488 Gene3D G3DSA:3.30.420.150 132 300 3.6E-34 T 11-11-2016 SHALO_RS01405 9c02e8f79b3dddc3e58404e3dc75de6f 488 SUPERFAMILY SSF53067 5 127 1.54E-30 T 11-11-2016 SHALO_RS01405 9c02e8f79b3dddc3e58404e3dc75de6f 488 SUPERFAMILY SSF53067 131 297 8.87E-37 T 11-11-2016 SHALO_RS01405 9c02e8f79b3dddc3e58404e3dc75de6f 488 PIRSF PIRSF001267 1 479 4.7E-84 T 11-11-2016 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 SHALO_RS01405 9c02e8f79b3dddc3e58404e3dc75de6f 488 Pfam PF02541 Ppx/GppA phosphatase family 19 298 6.4E-63 T 11-11-2016 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 SHALO_RS01405 9c02e8f79b3dddc3e58404e3dc75de6f 488 SUPERFAMILY SSF109604 312 467 1.32E-25 T 11-11-2016 SHALO_RS01405 9c02e8f79b3dddc3e58404e3dc75de6f 488 Gene3D G3DSA:3.30.420.40 3 125 4.3E-35 T 11-11-2016 SHALO_RS14505 3570a2e0ba639051da0b1209660b9bf0 335 SUPERFAMILY SSF53067 10 142 7.05E-24 T 11-11-2016 SHALO_RS14505 3570a2e0ba639051da0b1209660b9bf0 335 Pfam PF06723 MreB/Mbl protein 9 328 1.0E-93 T 11-11-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 SHALO_RS14505 3570a2e0ba639051da0b1209660b9bf0 335 Gene3D G3DSA:3.30.420.40 258 312 1.3E-24 T 11-11-2016 SHALO_RS14505 3570a2e0ba639051da0b1209660b9bf0 335 Gene3D G3DSA:3.30.420.40 155 182 1.3E-24 T 11-11-2016 SHALO_RS14505 3570a2e0ba639051da0b1209660b9bf0 335 Gene3D G3DSA:3.30.420.40 8 154 2.5E-26 T 11-11-2016 SHALO_RS14505 3570a2e0ba639051da0b1209660b9bf0 335 SUPERFAMILY SSF53067 150 324 2.9E-36 T 11-11-2016 SHALO_RS14505 3570a2e0ba639051da0b1209660b9bf0 335 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 66 89 7.7E-24 T 11-11-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 SHALO_RS14505 3570a2e0ba639051da0b1209660b9bf0 335 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 128 147 7.7E-24 T 11-11-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 SHALO_RS14505 3570a2e0ba639051da0b1209660b9bf0 335 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 46 64 7.7E-24 T 11-11-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 SHALO_RS14505 3570a2e0ba639051da0b1209660b9bf0 335 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 183 203 7.7E-24 T 11-11-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 SHALO_RS14505 3570a2e0ba639051da0b1209660b9bf0 335 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 295 321 7.7E-24 T 11-11-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 SHALO_RS14505 3570a2e0ba639051da0b1209660b9bf0 335 Gene3D G3DSA:3.90.640.10 183 252 4.5E-15 T 11-11-2016 SHALO_RS01835 dab5d0381c6173ffaa7f5bebb9c5ee34 421 Gene3D G3DSA:1.20.810.10 12 412 9.2E-127 T 11-11-2016 IPR027387 Cytochrome b/b6-like domain Reactome: R-HSA-611105 SHALO_RS01835 dab5d0381c6173ffaa7f5bebb9c5ee34 421 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 287 396 1.3E-25 T 11-11-2016 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 SHALO_RS01835 dab5d0381c6173ffaa7f5bebb9c5ee34 421 SUPERFAMILY SSF81342 12 289 5.49E-82 T 11-11-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 SHALO_RS01835 dab5d0381c6173ffaa7f5bebb9c5ee34 421 SUPERFAMILY SSF81648 243 389 1.31E-33 T 11-11-2016 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 SHALO_RS01835 dab5d0381c6173ffaa7f5bebb9c5ee34 421 Pfam PF00033 Cytochrome b/b6/petB 29 215 9.2E-58 T 11-11-2016 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 SHALO_RS05880 f24934d73588a4340eb5de7b00d972e6 137 Gene3D G3DSA:3.40.50.1010 2 122 1.5E-9 T 11-11-2016 IPR029060 PIN domain-like SHALO_RS05880 f24934d73588a4340eb5de7b00d972e6 137 SUPERFAMILY SSF88723 1 127 3.92E-16 T 11-11-2016 IPR029060 PIN domain-like SHALO_RS05880 f24934d73588a4340eb5de7b00d972e6 137 Pfam PF01850 PIN domain 5 116 2.3E-9 T 11-11-2016 IPR002716 PIN domain SHALO_RS08925 7c90c4634b0dd7a92faf4a4b8b2412d5 122 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 19 105 8.5E-13 T 11-11-2016 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis SHALO_RS08925 7c90c4634b0dd7a92faf4a4b8b2412d5 122 SUPERFAMILY SSF53146 1 122 2.22E-23 T 11-11-2016 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis SHALO_RS08925 7c90c4634b0dd7a92faf4a4b8b2412d5 122 Gene3D G3DSA:3.30.420.130 1 108 1.2E-20 T 11-11-2016 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis SHALO_RS12870 f9cdba604ca91e07dc8899d0247bbebf 298 TIGRFAM TIGR00688 rarD: protein RarD 9 262 5.5E-68 T 11-11-2016 IPR004626 RarD protein GO:0005215|GO:0005887|GO:0006810 SHALO_RS12870 f9cdba604ca91e07dc8899d0247bbebf 298 SUPERFAMILY SSF103481 209 288 2.62E-5 T 11-11-2016 SHALO_RS12870 f9cdba604ca91e07dc8899d0247bbebf 298 SUPERFAMILY SSF103481 44 143 6.67E-9 T 11-11-2016 SHALO_RS12870 f9cdba604ca91e07dc8899d0247bbebf 298 Pfam PF00892 EamA-like transporter family 10 143 2.7E-9 T 11-11-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SHALO_RS12335 a25e111a0a2ce7d091f19ae5e6f7421e 126 SUPERFAMILY SSF52172 7 125 1.15E-30 T 11-11-2016 IPR011006 CheY-like superfamily SHALO_RS12335 a25e111a0a2ce7d091f19ae5e6f7421e 126 SMART SM00448 7 121 2.9E-24 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS12335 a25e111a0a2ce7d091f19ae5e6f7421e 126 Pfam PF00072 Response regulator receiver domain 10 120 2.2E-24 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS12335 a25e111a0a2ce7d091f19ae5e6f7421e 126 Gene3D G3DSA:3.40.50.2300 5 124 5.2E-31 T 11-11-2016 SHALO_RS10895 a64c87f087f739c3587625d65dec30c2 452 Pfam PF02321 Outer membrane efflux protein 262 441 9.9E-31 T 11-11-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SHALO_RS10895 a64c87f087f739c3587625d65dec30c2 452 Pfam PF02321 Outer membrane efflux protein 53 234 1.9E-26 T 11-11-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SHALO_RS10895 a64c87f087f739c3587625d65dec30c2 452 Gene3D G3DSA:1.20.1600.10 47 442 1.0E-81 T 11-11-2016 SHALO_RS10895 a64c87f087f739c3587625d65dec30c2 452 PIRSF PIRSF001892 18 449 1.2E-119 T 11-11-2016 IPR028351 Cyclolysin transport protein CyaE GO:0005215 SHALO_RS10895 a64c87f087f739c3587625d65dec30c2 452 SUPERFAMILY SSF56954 9 443 6.02E-89 T 11-11-2016 SHALO_RS07705 eb516be2ac2065f922f37427839b2334 420 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 162 2.4E-14 T 11-11-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain SHALO_RS07705 eb516be2ac2065f922f37427839b2334 420 Gene3D G3DSA:3.40.50.880 239 416 2.8E-18 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like SHALO_RS07705 eb516be2ac2065f922f37427839b2334 420 SUPERFAMILY SSF52317 237 418 3.93E-22 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like SHALO_RS07705 eb516be2ac2065f922f37427839b2334 420 Gene3D G3DSA:3.40.50.300 3 175 5.9E-17 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS07705 eb516be2ac2065f922f37427839b2334 420 TIGRFAM TIGR00379 cobB: cobyrinic acid a,c-diamide synthase 6 416 2.1E-78 T 11-11-2016 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 SHALO_RS07705 eb516be2ac2065f922f37427839b2334 420 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 238 410 1.1E-24 T 11-11-2016 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 SHALO_RS07705 eb516be2ac2065f922f37427839b2334 420 SUPERFAMILY SSF52540 1 177 1.65E-29 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS04990 45a37c03b9c0bdb2a8fccf29acadecf7 215 SUPERFAMILY SSF52172 4 134 1.99E-30 T 11-11-2016 IPR011006 CheY-like superfamily SHALO_RS04990 45a37c03b9c0bdb2a8fccf29acadecf7 215 Gene3D G3DSA:1.10.10.10 125 214 1.9E-28 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS04990 45a37c03b9c0bdb2a8fccf29acadecf7 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 167 183 8.8E-16 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SHALO_RS04990 45a37c03b9c0bdb2a8fccf29acadecf7 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 153 167 8.8E-16 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SHALO_RS04990 45a37c03b9c0bdb2a8fccf29acadecf7 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 183 195 8.8E-16 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SHALO_RS04990 45a37c03b9c0bdb2a8fccf29acadecf7 215 Gene3D G3DSA:3.40.50.2300 2 124 2.5E-31 T 11-11-2016 SHALO_RS04990 45a37c03b9c0bdb2a8fccf29acadecf7 215 Pfam PF00072 Response regulator receiver domain 8 118 4.6E-22 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS04990 45a37c03b9c0bdb2a8fccf29acadecf7 215 SMART SM00421 150 207 1.5E-19 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SHALO_RS04990 45a37c03b9c0bdb2a8fccf29acadecf7 215 Pfam PF00196 Bacterial regulatory proteins, luxR family 153 207 4.3E-20 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SHALO_RS04990 45a37c03b9c0bdb2a8fccf29acadecf7 215 SMART SM00448 5 118 6.4E-23 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS04990 45a37c03b9c0bdb2a8fccf29acadecf7 215 ProSitePatterns PS00622 LuxR-type HTH domain signature. 167 194 - T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SHALO_RS04990 45a37c03b9c0bdb2a8fccf29acadecf7 215 SUPERFAMILY SSF46894 146 213 5.1E-21 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SHALO_RS05070 2d2cc030b0d7f8e2aa2a3d91c5439432 287 Pfam PF14297 Domain of unknown function (DUF4373) 10 94 2.3E-17 T 11-11-2016 IPR025400 Domain of unknown function DUF4373 SHALO_RS01025 46f8156371b239abed81cdce77e839ab 427 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 173 302 2.0E-34 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SHALO_RS01025 46f8156371b239abed81cdce77e839ab 427 Pfam PF13682 Chemoreceptor zinc-binding domain 313 375 3.6E-12 T 11-11-2016 IPR025991 Chemoreceptor zinc-binding domain SHALO_RS01025 46f8156371b239abed81cdce77e839ab 427 SMART SM00283 100 349 2.3E-33 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SHALO_RS01025 46f8156371b239abed81cdce77e839ab 427 Gene3D G3DSA:1.10.287.950 121 314 5.4E-47 T 11-11-2016 SHALO_RS01025 46f8156371b239abed81cdce77e839ab 427 SUPERFAMILY SSF58104 28 57 9.94E-53 T 11-11-2016 SHALO_RS01025 46f8156371b239abed81cdce77e839ab 427 SUPERFAMILY SSF58104 106 327 9.94E-53 T 11-11-2016 SHALO_RS09155 01be840b983a63a4e27ba618b848388e 2617 SUPERFAMILY SSF51126 38 305 2.51E-58 T 11-11-2016 IPR011050 Pectin lyase fold/virulence factor SHALO_RS09155 01be840b983a63a4e27ba618b848388e 2617 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 62 158 3.0E-20 T 11-11-2016 IPR008638 Filamentous haemagglutinin, N-terminal SHALO_RS09155 01be840b983a63a4e27ba618b848388e 2617 Gene3D G3DSA:2.160.20.10 32 317 5.3E-83 T 11-11-2016 IPR012334 Pectin lyase fold SHALO_RS09155 01be840b983a63a4e27ba618b848388e 2617 Gene3D G3DSA:2.160.20.10 1183 1258 5.5E-4 T 11-11-2016 IPR012334 Pectin lyase fold SHALO_RS09155 01be840b983a63a4e27ba618b848388e 2617 Pfam PF13332 Haemagluttinin repeat 1899 2052 2.6E-21 T 11-11-2016 IPR025157 Haemagluttinin repeat SHALO_RS09155 01be840b983a63a4e27ba618b848388e 2617 Pfam PF13332 Haemagluttinin repeat 1344 1410 0.0048 T 11-11-2016 IPR025157 Haemagluttinin repeat SHALO_RS09155 01be840b983a63a4e27ba618b848388e 2617 Pfam PF13332 Haemagluttinin repeat 1489 1572 1.6E-7 T 11-11-2016 IPR025157 Haemagluttinin repeat SHALO_RS09155 01be840b983a63a4e27ba618b848388e 2617 Pfam PF13332 Haemagluttinin repeat 1586 1656 5.0E-4 T 11-11-2016 IPR025157 Haemagluttinin repeat SHALO_RS09155 01be840b983a63a4e27ba618b848388e 2617 Pfam PF13332 Haemagluttinin repeat 1690 1787 6.5E-6 T 11-11-2016 IPR025157 Haemagluttinin repeat SHALO_RS09155 01be840b983a63a4e27ba618b848388e 2617 Pfam PF05860 haemagglutination activity domain 32 162 6.7E-31 T 11-11-2016 IPR008638 Filamentous haemagglutinin, N-terminal SHALO_RS09155 01be840b983a63a4e27ba618b848388e 2617 SMART SM00912 44 164 4.5E-43 T 11-11-2016 IPR008638 Filamentous haemagglutinin, N-terminal SHALO_RS09155 01be840b983a63a4e27ba618b848388e 2617 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 513 549 1.8 T 11-11-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat SHALO_RS09155 01be840b983a63a4e27ba618b848388e 2617 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 472 508 0.0054 T 11-11-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat SHALO_RS09155 01be840b983a63a4e27ba618b848388e 2617 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 549 587 0.02 T 11-11-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat SHALO_RS09155 01be840b983a63a4e27ba618b848388e 2617 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1186 1221 0.32 T 11-11-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat SHALO_RS09155 01be840b983a63a4e27ba618b848388e 2617 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1202 1241 3.0E-5 T 11-11-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat SHALO_RS09155 01be840b983a63a4e27ba618b848388e 2617 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1223 1256 0.0033 T 11-11-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat SHALO_RS09155 01be840b983a63a4e27ba618b848388e 2617 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 614 633 2.4 T 11-11-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat SHALO_RS09155 01be840b983a63a4e27ba618b848388e 2617 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 385 411 0.026 T 11-11-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat SHALO_RS05970 e277e220accf85e8ad035e693cbf4bbb 382 Pfam PF07804 HipA-like C-terminal domain 215 351 7.2E-26 T 11-11-2016 IPR012893 HipA-like, C-terminal SHALO_RS05970 e277e220accf85e8ad035e693cbf4bbb 382 TIGRFAM TIGR03071 couple_hipA: HipA N-terminal domain 5 95 2.2E-12 T 11-11-2016 IPR017508 HipA, N-terminal subdomain 1 SHALO_RS05970 e277e220accf85e8ad035e693cbf4bbb 382 Pfam PF13657 HipA N-terminal domain 5 99 3.4E-14 T 11-11-2016 IPR017508 HipA, N-terminal subdomain 1 SHALO_RS05970 e277e220accf85e8ad035e693cbf4bbb 382 Pfam PF07805 HipA-like N-terminal domain 137 207 5.2E-14 T 11-11-2016 IPR012894 HipA, N-terminal subdomain 2 SHALO_RS12600 d2c4177acc2bc766e3f3889524a899e7 373 SUPERFAMILY SSF56935 36 373 1.89E-14 T 11-11-2016 SHALO_RS12600 d2c4177acc2bc766e3f3889524a899e7 373 Gene3D G3DSA:2.40.160.10 57 373 5.5E-16 T 11-11-2016 IPR023614 Porin domain SHALO_RS12600 d2c4177acc2bc766e3f3889524a899e7 373 Pfam PF13609 Gram-negative porin 10 358 6.2E-9 T 11-11-2016 SHALO_RS12100 03a66dd9669ef244a15d2f0d95a8bbe0 337 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 62 155 1.2E-16 T 11-11-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHALO_RS12100 03a66dd9669ef244a15d2f0d95a8bbe0 337 Gene3D G3DSA:3.30.1360.10 10 51 1.3E-22 T 11-11-2016 SHALO_RS12100 03a66dd9669ef244a15d2f0d95a8bbe0 337 Gene3D G3DSA:3.30.1360.10 173 226 1.3E-22 T 11-11-2016 SHALO_RS12100 03a66dd9669ef244a15d2f0d95a8bbe0 337 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 1 314 29.331 T 11-11-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHALO_RS12100 03a66dd9669ef244a15d2f0d95a8bbe0 337 SUPERFAMILY SSF47789 249 317 9.29E-20 T 11-11-2016 SHALO_RS12100 03a66dd9669ef244a15d2f0d95a8bbe0 337 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 243 306 1.7E-22 T 11-11-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHALO_RS12100 03a66dd9669ef244a15d2f0d95a8bbe0 337 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 30 220 1.7E-12 T 11-11-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHALO_RS12100 03a66dd9669ef244a15d2f0d95a8bbe0 337 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 254 318 4.0E-9 T 11-11-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHALO_RS12100 03a66dd9669ef244a15d2f0d95a8bbe0 337 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 25 312 6.8E-87 T 11-11-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHALO_RS12100 03a66dd9669ef244a15d2f0d95a8bbe0 337 SMART SM00662 23 229 2.1E-55 T 11-11-2016 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHALO_RS12100 03a66dd9669ef244a15d2f0d95a8bbe0 337 Gene3D G3DSA:2.170.120.12 53 172 2.1E-30 T 11-11-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHALO_RS12100 03a66dd9669ef244a15d2f0d95a8bbe0 337 SUPERFAMILY SSF55257 174 227 6.93E-21 T 11-11-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHALO_RS12100 03a66dd9669ef244a15d2f0d95a8bbe0 337 SUPERFAMILY SSF55257 10 53 6.93E-21 T 11-11-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHALO_RS12100 03a66dd9669ef244a15d2f0d95a8bbe0 337 SUPERFAMILY SSF56553 53 173 4.84E-29 T 11-11-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHALO_RS12100 03a66dd9669ef244a15d2f0d95a8bbe0 337 Gene3D G3DSA:1.10.150.20 249 317 3.9E-22 T 11-11-2016 SHALO_RS06045 b0f4e0f55c8c7b87c4bd7395c24bfe99 404 Gene3D G3DSA:3.30.565.10 252 400 6.5E-30 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS06045 b0f4e0f55c8c7b87c4bd7395c24bfe99 404 SMART SM00388 180 250 4.9E-4 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS06045 b0f4e0f55c8c7b87c4bd7395c24bfe99 404 SUPERFAMILY SSF55874 250 400 9.92E-28 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS06045 b0f4e0f55c8c7b87c4bd7395c24bfe99 404 SUPERFAMILY SSF55785 46 148 9.5E-13 T 11-11-2016 IPR000014 PAS domain SHALO_RS06045 b0f4e0f55c8c7b87c4bd7395c24bfe99 404 SMART SM00091 32 98 0.0012 T 11-11-2016 IPR000014 PAS domain SHALO_RS06045 b0f4e0f55c8c7b87c4bd7395c24bfe99 404 PRINTS PR00344 Bacterial sensor protein C-terminal signature 388 401 7.8E-10 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS06045 b0f4e0f55c8c7b87c4bd7395c24bfe99 404 PRINTS PR00344 Bacterial sensor protein C-terminal signature 351 361 7.8E-10 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS06045 b0f4e0f55c8c7b87c4bd7395c24bfe99 404 PRINTS PR00344 Bacterial sensor protein C-terminal signature 364 382 7.8E-10 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS06045 b0f4e0f55c8c7b87c4bd7395c24bfe99 404 PRINTS PR00344 Bacterial sensor protein C-terminal signature 333 347 7.8E-10 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS06045 b0f4e0f55c8c7b87c4bd7395c24bfe99 404 Gene3D G3DSA:3.30.450.20 45 155 1.5E-12 T 11-11-2016 SHALO_RS06045 b0f4e0f55c8c7b87c4bd7395c24bfe99 404 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 295 400 7.8E-15 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS06045 b0f4e0f55c8c7b87c4bd7395c24bfe99 404 SUPERFAMILY SSF47384 174 248 1.0E-9 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS06045 b0f4e0f55c8c7b87c4bd7395c24bfe99 404 SMART SM00387 290 404 2.0E-13 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS06045 b0f4e0f55c8c7b87c4bd7395c24bfe99 404 Pfam PF13426 PAS domain 43 139 7.0E-10 T 11-11-2016 IPR000014 PAS domain SHALO_RS06045 b0f4e0f55c8c7b87c4bd7395c24bfe99 404 SMART SM00086 100 140 9.5E-4 T 11-11-2016 IPR001610 PAC motif SHALO_RS06045 b0f4e0f55c8c7b87c4bd7395c24bfe99 404 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 30 147 4.2E-12 T 11-11-2016 IPR000014 PAS domain SHALO_RS06045 b0f4e0f55c8c7b87c4bd7395c24bfe99 404 Gene3D G3DSA:1.10.287.130 177 244 3.8E-4 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS02805 0b09ee36c8e80fba3a46e090dfe7d134 198 Gene3D G3DSA:3.10.450.50 31 65 5.2E-9 T 11-11-2016 IPR032710 NTF2-like domain SHALO_RS02805 0b09ee36c8e80fba3a46e090dfe7d134 198 Gene3D G3DSA:3.10.450.50 110 164 5.2E-9 T 11-11-2016 IPR032710 NTF2-like domain SHALO_RS02805 0b09ee36c8e80fba3a46e090dfe7d134 198 Gene3D G3DSA:1.10.10.640 165 192 4.2E-14 T 11-11-2016 IPR023094 Toluene tolerance protein, alpha-helical SHALO_RS02805 0b09ee36c8e80fba3a46e090dfe7d134 198 Gene3D G3DSA:1.10.10.640 67 107 4.2E-14 T 11-11-2016 IPR023094 Toluene tolerance protein, alpha-helical SHALO_RS02805 0b09ee36c8e80fba3a46e090dfe7d134 198 Pfam PF05494 MlaC protein 34 191 9.7E-35 T 11-11-2016 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC SHALO_RS14500 0cd135f2d8e417eb21ec5166fc64b48a 564 SMART SM00304 235 287 0.003 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SHALO_RS14500 0cd135f2d8e417eb21ec5166fc64b48a 564 Gene3D G3DSA:1.10.287.950 319 532 2.7E-40 T 11-11-2016 SHALO_RS14500 0cd135f2d8e417eb21ec5166fc64b48a 564 SUPERFAMILY SSF58104 255 564 2.88E-52 T 11-11-2016 SHALO_RS14500 0cd135f2d8e417eb21ec5166fc64b48a 564 SMART SM00283 302 563 6.8E-36 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SHALO_RS14500 0cd135f2d8e417eb21ec5166fc64b48a 564 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 366 562 1.7E-36 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SHALO_RS09655 6581ba4e647b648928db09b6a22bfd1d 286 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 23 270 4.1E-50 T 11-11-2016 SHALO_RS09655 6581ba4e647b648928db09b6a22bfd1d 286 Gene3D G3DSA:3.40.190.10 113 224 5.1E-9 T 11-11-2016 SHALO_RS09655 6581ba4e647b648928db09b6a22bfd1d 286 SUPERFAMILY SSF53850 18 247 4.76E-31 T 11-11-2016 SHALO_RS09655 6581ba4e647b648928db09b6a22bfd1d 286 TIGRFAM TIGR01098 3A0109s03R: phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein 18 230 8.8E-35 T 11-11-2016 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein GO:0043190|GO:0055085 SHALO_RS01790 8113f61108ab27abb6f7f897a9cf17b9 195 Gene3D G3DSA:1.10.760.10 113 178 1.8E-11 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS01790 8113f61108ab27abb6f7f897a9cf17b9 195 SUPERFAMILY SSF46626 112 181 4.14E-11 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS06905 b592fc3f925a39a108ed26041d84a160 251 TIGRFAM TIGR02757 TIGR02757: TIGR02757 family protein 26 248 7.9E-74 T 11-11-2016 IPR014127 Conserved hypothetical protein CHP02757 SHALO_RS06905 b592fc3f925a39a108ed26041d84a160 251 Pfam PF09674 Protein of unknown function (DUF2400) 29 247 4.6E-66 T 11-11-2016 IPR014127 Conserved hypothetical protein CHP02757 SHALO_RS03840 f26d36c0214e5b4ba52455aeebde5862 486 Gene3D G3DSA:3.90.700.10 223 327 1.1E-31 T 11-11-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_RS03840 f26d36c0214e5b4ba52455aeebde5862 486 Gene3D G3DSA:3.50.50.60 2 222 6.6E-80 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHALO_RS03840 f26d36c0214e5b4ba52455aeebde5862 486 Gene3D G3DSA:3.50.50.60 328 390 6.6E-80 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHALO_RS03840 f26d36c0214e5b4ba52455aeebde5862 486 Gene3D G3DSA:1.20.58.100 412 445 5.8E-7 T 11-11-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_RS03840 f26d36c0214e5b4ba52455aeebde5862 486 SUPERFAMILY SSF56425 217 331 3.44E-34 T 11-11-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_RS03840 f26d36c0214e5b4ba52455aeebde5862 486 SUPERFAMILY SSF46977 412 479 6.02E-12 T 11-11-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_RS03840 f26d36c0214e5b4ba52455aeebde5862 486 SUPERFAMILY SSF51905 335 400 2.56E-51 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHALO_RS03840 f26d36c0214e5b4ba52455aeebde5862 486 SUPERFAMILY SSF51905 2 234 2.56E-51 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHALO_RS03840 f26d36c0214e5b4ba52455aeebde5862 486 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 4 482 6.6E-148 T 11-11-2016 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 SHALO_RS03840 f26d36c0214e5b4ba52455aeebde5862 486 Pfam PF00890 FAD binding domain 6 372 6.5E-82 T 11-11-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_RS07050 27c564892d3f794e61de3fb3c9853625 385 Gene3D G3DSA:3.40.50.700 72 248 3.9E-52 T 11-11-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS07050 27c564892d3f794e61de3fb3c9853625 385 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 38 61 1.5E-6 T 11-11-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal SHALO_RS07050 27c564892d3f794e61de3fb3c9853625 385 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 84 230 2.6E-28 T 11-11-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS07050 27c564892d3f794e61de3fb3c9853625 385 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 183 207 5.2E-84 T 11-11-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SHALO_RS07050 27c564892d3f794e61de3fb3c9853625 385 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 237 254 5.2E-84 T 11-11-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SHALO_RS07050 27c564892d3f794e61de3fb3c9853625 385 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 307 320 5.2E-84 T 11-11-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SHALO_RS07050 27c564892d3f794e61de3fb3c9853625 385 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 255 273 5.2E-84 T 11-11-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SHALO_RS07050 27c564892d3f794e61de3fb3c9853625 385 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 279 305 5.2E-84 T 11-11-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SHALO_RS07050 27c564892d3f794e61de3fb3c9853625 385 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 92 116 5.2E-84 T 11-11-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SHALO_RS07050 27c564892d3f794e61de3fb3c9853625 385 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 138 161 5.2E-84 T 11-11-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SHALO_RS07050 27c564892d3f794e61de3fb3c9853625 385 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 69 91 5.2E-84 T 11-11-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SHALO_RS07050 27c564892d3f794e61de3fb3c9853625 385 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 211 234 5.2E-84 T 11-11-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SHALO_RS07050 27c564892d3f794e61de3fb3c9853625 385 SUPERFAMILY SSF56770 72 334 1.02E-87 T 11-11-2016 SHALO_RS07050 27c564892d3f794e61de3fb3c9853625 385 TIGRFAM TIGR00391 hydA: hydrogenase (NiFe) small subunit (hydA) 25 378 3.0E-161 T 11-11-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SHALO_RS07050 27c564892d3f794e61de3fb3c9853625 385 Pfam PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal 250 332 2.3E-32 T 11-11-2016 IPR027394 Cytochrome-c3 hydrogenase, C-terminal SHALO_RS07050 27c564892d3f794e61de3fb3c9853625 385 PIRSF PIRSF000310 27 385 1.2E-143 T 11-11-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 SHALO_RS07050 27c564892d3f794e61de3fb3c9853625 385 Gene3D G3DSA:4.10.480.10 250 334 2.9E-39 T 11-11-2016 IPR027394 Cytochrome-c3 hydrogenase, C-terminal SHALO_RS09270 b755ad29180f312db45586dbda19831b 121 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 5 120 1.0E-35 T 11-11-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 SHALO_RS09270 b755ad29180f312db45586dbda19831b 121 Pfam PF01641 SelR domain 5 118 1.8E-43 T 11-11-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 SHALO_RS09270 b755ad29180f312db45586dbda19831b 121 Gene3D G3DSA:2.170.150.20 5 120 1.2E-49 T 11-11-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 SHALO_RS09270 b755ad29180f312db45586dbda19831b 121 SUPERFAMILY SSF51316 4 120 4.92E-47 T 11-11-2016 IPR011057 Mss4-like SHALO_RS00795 2da3980e9e852a260a2c8c867d12ab2b 387 Gene3D G3DSA:3.40.50.2300 30 228 4.2E-45 T 11-11-2016 SHALO_RS00795 2da3980e9e852a260a2c8c867d12ab2b 387 Pfam PF13458 Periplasmic binding protein 30 345 3.7E-57 T 11-11-2016 IPR028081 Leucine-binding protein domain SHALO_RS00795 2da3980e9e852a260a2c8c867d12ab2b 387 SUPERFAMILY SSF53822 30 381 1.72E-60 T 11-11-2016 IPR028082 Periplasmic binding protein-like I SHALO_RS08745 ec978e0d3c29d7f7295693f89c423836 226 Pfam PF00072 Response regulator receiver domain 4 112 2.2E-25 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS08745 ec978e0d3c29d7f7295693f89c423836 226 SMART SM00448 2 112 8.5E-36 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS08745 ec978e0d3c29d7f7295693f89c423836 226 SUPERFAMILY SSF52172 2 130 8.25E-37 T 11-11-2016 IPR011006 CheY-like superfamily SHALO_RS08745 ec978e0d3c29d7f7295693f89c423836 226 SMART SM00862 148 224 1.1E-19 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS08745 ec978e0d3c29d7f7295693f89c423836 226 Gene3D G3DSA:3.40.50.2300 2 124 3.5E-36 T 11-11-2016 SHALO_RS08745 ec978e0d3c29d7f7295693f89c423836 226 Gene3D G3DSA:1.10.10.10 126 224 6.8E-25 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS08745 ec978e0d3c29d7f7295693f89c423836 226 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 224 2.3E-20 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS08745 ec978e0d3c29d7f7295693f89c423836 226 SUPERFAMILY SSF46894 126 224 2.13E-22 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SHALO_RS09725 7c1e78d68c947985911c77bb042d4e58 151 SUPERFAMILY SSF48695 102 137 4.74E-5 T 11-11-2016 IPR011031 Multihaem cytochrome SHALO_RS09725 7c1e78d68c947985911c77bb042d4e58 151 SUPERFAMILY SSF48695 5 69 4.74E-5 T 11-11-2016 IPR011031 Multihaem cytochrome SHALO_RS09725 7c1e78d68c947985911c77bb042d4e58 151 Pfam PF09626 Dihaem cytochrome c 28 137 3.5E-36 T 11-11-2016 IPR018588 Dihaem cytochrome c SHALO_RS09725 7c1e78d68c947985911c77bb042d4e58 151 Gene3D G3DSA:3.90.10.10 104 134 4.1E-4 T 11-11-2016 SHALO_RS09725 7c1e78d68c947985911c77bb042d4e58 151 Gene3D G3DSA:3.90.10.10 27 36 4.1E-4 T 11-11-2016 SHALO_RS02990 21364f4d353126948d13890393cd787f 553 SMART SM00382 37 179 9.9E-8 T 11-11-2016 IPR003593 AAA+ ATPase domain SHALO_RS02990 21364f4d353126948d13890393cd787f 553 Gene3D G3DSA:1.10.8.60 167 243 9.3E-29 T 11-11-2016 SHALO_RS02990 21364f4d353126948d13890393cd787f 553 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 299 5.4E-124 T 11-11-2016 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 SHALO_RS02990 21364f4d353126948d13890393cd787f 553 Pfam PF13177 DNA polymerase III, delta subunit 20 178 5.0E-45 T 11-11-2016 SHALO_RS02990 21364f4d353126948d13890393cd787f 553 SUPERFAMILY SSF52540 33 225 2.44E-58 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS02990 21364f4d353126948d13890393cd787f 553 Gene3D G3DSA:3.40.50.300 15 166 1.3E-64 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS08870 559a0811b3e678161975e9769fc863fe 223 Hamap MF_00421 Phosphoribosylformylglycinamidine synthase subunit PurQ [purQ]. 1 223 40.106 T 11-11-2016 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 SHALO_RS08870 559a0811b3e678161975e9769fc863fe 223 TIGRFAM TIGR01737 FGAM_synth_I: phosphoribosylformylglycinamidine synthase I 1 222 7.5E-89 T 11-11-2016 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 SHALO_RS08870 559a0811b3e678161975e9769fc863fe 223 SMART SM01211 1 222 4.1E-110 T 11-11-2016 SHALO_RS08870 559a0811b3e678161975e9769fc863fe 223 SUPERFAMILY SSF52317 1 222 4.31E-71 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like SHALO_RS08870 559a0811b3e678161975e9769fc863fe 223 PIRSF PIRSF001586 1 223 2.3E-79 T 11-11-2016 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 SHALO_RS08870 559a0811b3e678161975e9769fc863fe 223 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 3 209 2.3E-47 T 11-11-2016 SHALO_RS08870 559a0811b3e678161975e9769fc863fe 223 Gene3D G3DSA:3.40.50.880 3 222 2.6E-36 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like SHALO_RS06860 309e6c0b519e2a1b2fc73c3a2d07e006 122 SUPERFAMILY SSF160214 20 121 2.48E-25 T 11-11-2016 IPR005186 FlaG protein SHALO_RS06860 309e6c0b519e2a1b2fc73c3a2d07e006 122 Pfam PF03646 FlaG protein 23 120 1.7E-24 T 11-11-2016 IPR005186 FlaG protein SHALO_RS06860 309e6c0b519e2a1b2fc73c3a2d07e006 122 Gene3D G3DSA:3.30.160.170 24 118 3.1E-24 T 11-11-2016 IPR005186 FlaG protein SHALO_RS09010 a5066aef9df612a694b919fcba06c725 458 SUPERFAMILY SSF53067 4 211 3.97E-51 T 11-11-2016 SHALO_RS09010 a5066aef9df612a694b919fcba06c725 458 SMART SM00842 5 192 9.8E-86 T 11-11-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 SHALO_RS09010 a5066aef9df612a694b919fcba06c725 458 Gene3D G3DSA:3.90.640.10 231 291 2.0E-12 T 11-11-2016 SHALO_RS09010 a5066aef9df612a694b919fcba06c725 458 Pfam PF14450 Cell division protein FtsA 7 190 6.3E-11 T 11-11-2016 SHALO_RS09010 a5066aef9df612a694b919fcba06c725 458 Pfam PF14450 Cell division protein FtsA 203 369 1.3E-19 T 11-11-2016 SHALO_RS09010 a5066aef9df612a694b919fcba06c725 458 Gene3D G3DSA:3.30.420.40 154 204 1.3E-21 T 11-11-2016 SHALO_RS09010 a5066aef9df612a694b919fcba06c725 458 Gene3D G3DSA:3.30.420.40 3 78 1.3E-21 T 11-11-2016 SHALO_RS09010 a5066aef9df612a694b919fcba06c725 458 SUPERFAMILY SSF53067 195 373 1.12E-36 T 11-11-2016 SHALO_RS09010 a5066aef9df612a694b919fcba06c725 458 Pfam PF02491 SHS2 domain inserted in FTSA 80 158 3.2E-24 T 11-11-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 SHALO_RS09010 a5066aef9df612a694b919fcba06c725 458 Hamap MF_02033 Cell division protein FtsA [ftsA]. 1 458 27.536 T 11-11-2016 IPR020823 Cell division protein FtsA GO:0007049 SHALO_RS09010 a5066aef9df612a694b919fcba06c725 458 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 5 373 4.7E-132 T 11-11-2016 IPR020823 Cell division protein FtsA GO:0007049 SHALO_RS09010 a5066aef9df612a694b919fcba06c725 458 Gene3D G3DSA:3.30.1490.110 93 153 8.5E-14 T 11-11-2016 SHALO_RS09010 a5066aef9df612a694b919fcba06c725 458 PIRSF PIRSF003101 1 456 1.3E-111 T 11-11-2016 IPR020823 Cell division protein FtsA GO:0007049 SHALO_RS09010 a5066aef9df612a694b919fcba06c725 458 Gene3D G3DSA:3.30.420.40 292 346 1.7E-19 T 11-11-2016 SHALO_RS09010 a5066aef9df612a694b919fcba06c725 458 Gene3D G3DSA:3.30.420.40 205 230 1.7E-19 T 11-11-2016 SHALO_RS06000 eb787033a231af3cabeff718e0b91a67 422 SUPERFAMILY SSF53822 118 335 3.69E-5 T 11-11-2016 IPR028082 Periplasmic binding protein-like I SHALO_RS11995 0841fced9869f6f46e2f456661adffa5 407 PRINTS PR00344 Bacterial sensor protein C-terminal signature 366 384 5.8E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS11995 0841fced9869f6f46e2f456661adffa5 407 PRINTS PR00344 Bacterial sensor protein C-terminal signature 335 349 5.8E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS11995 0841fced9869f6f46e2f456661adffa5 407 PRINTS PR00344 Bacterial sensor protein C-terminal signature 353 363 5.8E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS11995 0841fced9869f6f46e2f456661adffa5 407 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 403 5.8E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS11995 0841fced9869f6f46e2f456661adffa5 407 SMART SM00387 293 406 1.9E-13 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS11995 0841fced9869f6f46e2f456661adffa5 407 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 297 404 3.6E-13 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS11995 0841fced9869f6f46e2f456661adffa5 407 SMART SM00091 4 70 1.5E-4 T 11-11-2016 IPR000014 PAS domain SHALO_RS11995 0841fced9869f6f46e2f456661adffa5 407 SUPERFAMILY SSF55785 12 114 3.84E-27 T 11-11-2016 IPR000014 PAS domain SHALO_RS11995 0841fced9869f6f46e2f456661adffa5 407 SUPERFAMILY SSF47384 177 249 9.61E-5 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS11995 0841fced9869f6f46e2f456661adffa5 407 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 3 124 4.3E-23 T 11-11-2016 IPR000014 PAS domain SHALO_RS11995 0841fced9869f6f46e2f456661adffa5 407 SMART SM00086 75 117 6.9E-7 T 11-11-2016 IPR001610 PAC motif SHALO_RS11995 0841fced9869f6f46e2f456661adffa5 407 Pfam PF08447 PAS fold 26 110 1.4E-15 T 11-11-2016 IPR013655 PAS fold-3 GO:0005515 SHALO_RS11995 0841fced9869f6f46e2f456661adffa5 407 SUPERFAMILY SSF55874 253 404 1.31E-27 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS11995 0841fced9869f6f46e2f456661adffa5 407 Gene3D G3DSA:3.30.565.10 255 405 1.8E-28 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS11995 0841fced9869f6f46e2f456661adffa5 407 Gene3D G3DSA:3.30.450.20 15 116 1.5E-26 T 11-11-2016 SHALO_RS15125 021b5b4e1884e16dc619f638df8d73d3 307 Pfam PF11335 Protein of unknown function (DUF3137) 155 299 8.2E-38 T 11-11-2016 IPR021484 Protein of unknown function DUF3137 SHALO_RS13920 b7c7c940bffa556a37abe30a30a98c2f 434 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 144 353 1.2E-70 T 11-11-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SHALO_RS13920 b7c7c940bffa556a37abe30a30a98c2f 434 SMART SM00382 156 337 3.9E-8 T 11-11-2016 IPR003593 AAA+ ATPase domain SHALO_RS13920 b7c7c940bffa556a37abe30a30a98c2f 434 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 8 433 1.1E-176 T 11-11-2016 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SHALO_RS13920 b7c7c940bffa556a37abe30a30a98c2f 434 SUPERFAMILY SSF52540 92 359 5.15E-90 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS13920 b7c7c940bffa556a37abe30a30a98c2f 434 Gene3D G3DSA:3.40.50.300 91 355 5.9E-89 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS06010 9d22dd5495dab60df9e4d0834332b483 331 Pfam PF13855 Leucine rich repeat 214 270 9.6E-9 T 11-11-2016 IPR001611 Leucine-rich repeat GO:0005515 SHALO_RS06010 9d22dd5495dab60df9e4d0834332b483 331 Pfam PF13855 Leucine rich repeat 30 87 1.9E-7 T 11-11-2016 IPR001611 Leucine-rich repeat GO:0005515 SHALO_RS06010 9d22dd5495dab60df9e4d0834332b483 331 Gene3D G3DSA:3.80.10.10 14 319 8.5E-69 T 11-11-2016 IPR032675 Leucine-rich repeat domain, L domain-like SHALO_RS06010 9d22dd5495dab60df9e4d0834332b483 331 SMART SM00364 97 116 65.0 T 11-11-2016 SHALO_RS06010 9d22dd5495dab60df9e4d0834332b483 331 SMART SM00364 257 276 6.1 T 11-11-2016 SHALO_RS06010 9d22dd5495dab60df9e4d0834332b483 331 SMART SM00364 28 47 180.0 T 11-11-2016 SHALO_RS06010 9d22dd5495dab60df9e4d0834332b483 331 SMART SM00364 166 185 1.2 T 11-11-2016 SHALO_RS06010 9d22dd5495dab60df9e4d0834332b483 331 SMART SM00364 74 93 47.0 T 11-11-2016 SHALO_RS06010 9d22dd5495dab60df9e4d0834332b483 331 SMART SM00364 189 208 28.0 T 11-11-2016 SHALO_RS06010 9d22dd5495dab60df9e4d0834332b483 331 SMART SM00364 51 70 5.4 T 11-11-2016 SHALO_RS06010 9d22dd5495dab60df9e4d0834332b483 331 SMART SM00364 234 253 260.0 T 11-11-2016 SHALO_RS06010 9d22dd5495dab60df9e4d0834332b483 331 SMART SM00364 280 299 16.0 T 11-11-2016 SHALO_RS06010 9d22dd5495dab60df9e4d0834332b483 331 PRINTS PR00019 Leucine-rich repeat signature 257 270 1.3E-5 T 11-11-2016 SHALO_RS06010 9d22dd5495dab60df9e4d0834332b483 331 PRINTS PR00019 Leucine-rich repeat signature 169 182 1.3E-5 T 11-11-2016 SHALO_RS06010 9d22dd5495dab60df9e4d0834332b483 331 SUPERFAMILY SSF52058 15 320 6.12E-62 T 11-11-2016 IPR032675 Leucine-rich repeat domain, L domain-like SHALO_RS06010 9d22dd5495dab60df9e4d0834332b483 331 SMART SM00369 257 279 0.14 T 11-11-2016 IPR003591 Leucine-rich repeat, typical subtype SHALO_RS06010 9d22dd5495dab60df9e4d0834332b483 331 SMART SM00369 280 302 9.6 T 11-11-2016 IPR003591 Leucine-rich repeat, typical subtype SHALO_RS06010 9d22dd5495dab60df9e4d0834332b483 331 SMART SM00369 120 142 8.4 T 11-11-2016 IPR003591 Leucine-rich repeat, typical subtype SHALO_RS06010 9d22dd5495dab60df9e4d0834332b483 331 SMART SM00369 143 165 46.0 T 11-11-2016 IPR003591 Leucine-rich repeat, typical subtype SHALO_RS06010 9d22dd5495dab60df9e4d0834332b483 331 SMART SM00369 234 255 31.0 T 11-11-2016 IPR003591 Leucine-rich repeat, typical subtype SHALO_RS06010 9d22dd5495dab60df9e4d0834332b483 331 SMART SM00369 51 73 12.0 T 11-11-2016 IPR003591 Leucine-rich repeat, typical subtype SHALO_RS06010 9d22dd5495dab60df9e4d0834332b483 331 SMART SM00369 189 211 69.0 T 11-11-2016 IPR003591 Leucine-rich repeat, typical subtype SHALO_RS06010 9d22dd5495dab60df9e4d0834332b483 331 SMART SM00369 97 119 0.24 T 11-11-2016 IPR003591 Leucine-rich repeat, typical subtype SHALO_RS06010 9d22dd5495dab60df9e4d0834332b483 331 SMART SM00369 28 50 42.0 T 11-11-2016 IPR003591 Leucine-rich repeat, typical subtype SHALO_RS06010 9d22dd5495dab60df9e4d0834332b483 331 SMART SM00369 74 96 40.0 T 11-11-2016 IPR003591 Leucine-rich repeat, typical subtype SHALO_RS06010 9d22dd5495dab60df9e4d0834332b483 331 SMART SM00369 166 187 6.8 T 11-11-2016 IPR003591 Leucine-rich repeat, typical subtype SHALO_RS10010 926e2de7a2f6236d006dfe15a4166933 268 Pfam PF13277 YmdB-like protein 5 246 1.8E-90 T 11-11-2016 IPR005235 Metallophosphoesterase, YmdB-like SHALO_RS10010 926e2de7a2f6236d006dfe15a4166933 268 TIGRFAM TIGR00282 TIGR00282: metallophosphoesterase, MG_246/BB_0505 family 1 258 1.4E-78 T 11-11-2016 IPR005235 Metallophosphoesterase, YmdB-like SHALO_RS10010 926e2de7a2f6236d006dfe15a4166933 268 PIRSF PIRSF004789 1 262 5.0E-93 T 11-11-2016 IPR005235 Metallophosphoesterase, YmdB-like SHALO_RS10010 926e2de7a2f6236d006dfe15a4166933 268 SUPERFAMILY SSF56300 1 243 4.74E-71 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like SHALO_RS10010 926e2de7a2f6236d006dfe15a4166933 268 Gene3D G3DSA:3.60.21.30 1 262 9.2E-97 T 11-11-2016 SHALO_RS10315 a27bedfe46e13d28e51fa248a670f471 218 Gene3D G3DSA:1.10.10.10 127 210 2.1E-11 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS10315 a27bedfe46e13d28e51fa248a670f471 218 Gene3D G3DSA:3.40.50.2300 1 120 3.3E-31 T 11-11-2016 SHALO_RS10315 a27bedfe46e13d28e51fa248a670f471 218 Pfam PF00072 Response regulator receiver domain 3 111 6.6E-24 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS10315 a27bedfe46e13d28e51fa248a670f471 218 SMART SM00862 141 210 1.0E-8 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS10315 a27bedfe46e13d28e51fa248a670f471 218 SUPERFAMILY SSF46894 121 211 1.56E-11 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SHALO_RS10315 a27bedfe46e13d28e51fa248a670f471 218 SMART SM00448 1 111 5.3E-29 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS10315 a27bedfe46e13d28e51fa248a670f471 218 Pfam PF00486 Transcriptional regulatory protein, C terminal 143 210 1.3E-9 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS10315 a27bedfe46e13d28e51fa248a670f471 218 SUPERFAMILY SSF52172 1 117 2.99E-29 T 11-11-2016 IPR011006 CheY-like superfamily SHALO_RS06165 7180d8d7e7ebd835c648647c90571178 140 Gene3D G3DSA:3.10.590.10 1 87 2.8E-5 T 11-11-2016 IPR002740 EVE domain SHALO_RS08790 9da39b54b7e2845d649852264b8364aa 324 Pfam PF14804 Jag N-terminus 3 51 2.8E-15 T 11-11-2016 IPR032782 Jag, N-terminal SHALO_RS08790 9da39b54b7e2845d649852264b8364aa 324 Gene3D G3DSA:3.30.30.80 1 53 7.1E-19 T 11-11-2016 IPR032782 Jag, N-terminal SHALO_RS08790 9da39b54b7e2845d649852264b8364aa 324 SMART SM01245 2 53 4.3E-19 T 11-11-2016 IPR032782 Jag, N-terminal SHALO_RS08790 9da39b54b7e2845d649852264b8364aa 324 Gene3D G3DSA:3.30.300.120 172 248 1.1E-12 T 11-11-2016 SHALO_RS09405 9f379d7ff15d0f65517b9215e58f3ac5 755 ProSitePatterns PS01228 Hypothetical cof family signature 1. 17 28 - T 11-11-2016 IPR000150 Cof protein GO:0016787 SHALO_RS09405 9f379d7ff15d0f65517b9215e58f3ac5 755 Pfam PF00982 Glycosyltransferase family 20 266 747 2.1E-134 T 11-11-2016 IPR001830 Glycosyl transferase, family 20 GO:0003824|GO:0005992 SHALO_RS09405 9f379d7ff15d0f65517b9215e58f3ac5 755 Gene3D G3DSA:3.40.50.2000 536 733 7.2E-70 T 11-11-2016 SHALO_RS09405 9f379d7ff15d0f65517b9215e58f3ac5 755 Gene3D G3DSA:3.40.50.2000 264 535 8.9E-66 T 11-11-2016 SHALO_RS09405 9f379d7ff15d0f65517b9215e58f3ac5 755 Pfam PF05116 Sucrose-6F-phosphate phosphohydrolase 16 249 8.2E-50 T 11-11-2016 IPR006380 Sucrose-phosphatase, N-terminal SHALO_RS09405 9f379d7ff15d0f65517b9215e58f3ac5 755 SUPERFAMILY SSF56784 17 222 5.32E-27 T 11-11-2016 IPR023214 HAD-like domain SHALO_RS09405 9f379d7ff15d0f65517b9215e58f3ac5 755 TIGRFAM TIGR02398 gluc_glyc_Psyn: glucosylglycerol-phosphate synthase 269 753 2.5E-200 T 11-11-2016 IPR012764 Glucosylglycerol-phosphate synthase GO:0016758|GO:0051473 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 SHALO_RS09405 9f379d7ff15d0f65517b9215e58f3ac5 755 SUPERFAMILY SSF53756 264 746 5.02E-126 T 11-11-2016 SHALO_RS09405 9f379d7ff15d0f65517b9215e58f3ac5 755 Gene3D G3DSA:3.40.50.1000 162 248 6.4E-25 T 11-11-2016 IPR023214 HAD-like domain SHALO_RS09405 9f379d7ff15d0f65517b9215e58f3ac5 755 Gene3D G3DSA:3.40.50.1000 17 94 6.4E-25 T 11-11-2016 IPR023214 HAD-like domain SHALO_RS06135 67fe905139b7cef97bd0cbaf130a4ca2 98 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 13 87 1.5E-13 T 11-11-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 SHALO_RS06135 67fe905139b7cef97bd0cbaf130a4ca2 98 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 37 45 - T 11-11-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 SHALO_RS06135 67fe905139b7cef97bd0cbaf130a4ca2 98 SUPERFAMILY SSF54292 2 94 3.15E-17 T 11-11-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 SHALO_RS06135 67fe905139b7cef97bd0cbaf130a4ca2 98 Gene3D G3DSA:3.10.20.30 3 97 2.0E-18 T 11-11-2016 IPR012675 Beta-grasp domain SHALO_RS06820 98f5996add372f458a35a064ea6201aa 144 Gene3D G3DSA:3.30.70.260 6 55 4.3E-8 T 11-11-2016 SHALO_RS06820 98f5996add372f458a35a064ea6201aa 144 Gene3D G3DSA:3.30.70.260 66 131 3.0E-4 T 11-11-2016 SHALO_RS06820 98f5996add372f458a35a064ea6201aa 144 SUPERFAMILY SSF55021 74 140 7.75E-9 T 11-11-2016 SHALO_RS06820 98f5996add372f458a35a064ea6201aa 144 SUPERFAMILY SSF55021 5 71 1.79E-14 T 11-11-2016 SHALO_RS01605 9f0d51988d6429c63321e606fbcc3a9b 421 SUPERFAMILY SSF102114 22 405 1.44E-59 T 11-11-2016 SHALO_RS01605 9f0d51988d6429c63321e606fbcc3a9b 421 Pfam PF04055 Radical SAM superfamily 47 212 2.1E-14 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SHALO_RS01605 9f0d51988d6429c63321e606fbcc3a9b 421 Gene3D G3DSA:3.80.30.20 42 227 1.1E-22 T 11-11-2016 IPR023404 Radical SAM, alpha/beta horseshoe SHALO_RS01605 9f0d51988d6429c63321e606fbcc3a9b 421 Pfam PF13394 4Fe-4S single cluster domain 46 130 4.7E-7 T 11-11-2016 SHALO_RS01605 9f0d51988d6429c63321e606fbcc3a9b 421 SMART SM00729 42 257 3.7E-27 T 11-11-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 SHALO_RS01125 fef9b25e7a8b0cfdd3bffc8db73b2a37 178 Pfam PF09624 Protein of unknown function (DUF2393) 32 178 2.4E-36 T 11-11-2016 IPR013417 Conserved hypothetical protein CHP02588 SHALO_RS06740 03b3b1e3bf447415c29621af0c9e6b10 265 Pfam PF00691 OmpA family 132 233 5.2E-18 T 11-11-2016 IPR006665 OmpA-like domain SHALO_RS06740 03b3b1e3bf447415c29621af0c9e6b10 265 Gene3D G3DSA:3.30.1330.60 115 240 1.1E-29 T 11-11-2016 IPR006665 OmpA-like domain SHALO_RS06740 03b3b1e3bf447415c29621af0c9e6b10 265 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 4 52 2.8E-13 T 11-11-2016 IPR025713 Motility protein B, N-terminal domain SHALO_RS06740 03b3b1e3bf447415c29621af0c9e6b10 265 SUPERFAMILY SSF103088 119 239 3.14E-26 T 11-11-2016 IPR006665 OmpA-like domain SHALO_RS12940 efaf8c0e5c6531bdf9e04392ad8f1db0 254 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 1 254 17.24 T 11-11-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 SHALO_RS12940 efaf8c0e5c6531bdf9e04392ad8f1db0 254 Pfam PF02673 Bacitracin resistance protein BacA 7 249 7.6E-70 T 11-11-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 SHALO_RS08765 9b756d778cc94775dadaaabe8ab8a568 858 SUPERFAMILY SSF81767 229 352 8.5E-44 T 11-11-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 SHALO_RS08765 9b756d778cc94775dadaaabe8ab8a568 858 SMART SM00958 230 342 1.2E-62 T 11-11-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 SHALO_RS08765 9b756d778cc94775dadaaabe8ab8a568 858 PRINTS PR00906 SecA protein signature 102 116 2.6E-66 T 11-11-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SHALO_RS08765 9b756d778cc94775dadaaabe8ab8a568 858 PRINTS PR00906 SecA protein signature 323 345 2.6E-66 T 11-11-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SHALO_RS08765 9b756d778cc94775dadaaabe8ab8a568 858 PRINTS PR00906 SecA protein signature 172 192 2.6E-66 T 11-11-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SHALO_RS08765 9b756d778cc94775dadaaabe8ab8a568 858 PRINTS PR00906 SecA protein signature 118 128 2.6E-66 T 11-11-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SHALO_RS08765 9b756d778cc94775dadaaabe8ab8a568 858 PRINTS PR00906 SecA protein signature 397 410 2.6E-66 T 11-11-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SHALO_RS08765 9b756d778cc94775dadaaabe8ab8a568 858 PRINTS PR00906 SecA protein signature 64 88 2.6E-66 T 11-11-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SHALO_RS08765 9b756d778cc94775dadaaabe8ab8a568 858 PRINTS PR00906 SecA protein signature 360 377 2.6E-66 T 11-11-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SHALO_RS08765 9b756d778cc94775dadaaabe8ab8a568 858 Gene3D G3DSA:3.90.1440.10 234 352 8.4E-45 T 11-11-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 SHALO_RS08765 9b756d778cc94775dadaaabe8ab8a568 858 Gene3D G3DSA:3.40.50.300 353 400 4.4E-115 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS08765 9b756d778cc94775dadaaabe8ab8a568 858 Gene3D G3DSA:3.40.50.300 2 230 4.4E-115 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS08765 9b756d778cc94775dadaaabe8ab8a568 858 Pfam PF07517 SecA DEAD-like domain 7 385 5.9E-123 T 11-11-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 SHALO_RS08765 9b756d778cc94775dadaaabe8ab8a568 858 Gene3D G3DSA:1.10.3060.10 603 782 4.0E-41 T 11-11-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 SHALO_RS08765 9b756d778cc94775dadaaabe8ab8a568 858 ProSitePatterns PS01312 SecA family signature. 484 499 - T 11-11-2016 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 SHALO_RS08765 9b756d778cc94775dadaaabe8ab8a568 858 SUPERFAMILY SSF52540 400 573 3.67E-53 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS08765 9b756d778cc94775dadaaabe8ab8a568 858 SUPERFAMILY SSF81886 575 793 9.94E-66 T 11-11-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 SHALO_RS08765 9b756d778cc94775dadaaabe8ab8a568 858 SUPERFAMILY SSF81886 827 839 9.94E-66 T 11-11-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 SHALO_RS08765 9b756d778cc94775dadaaabe8ab8a568 858 Pfam PF01043 SecA preprotein cross-linking domain 237 342 1.1E-37 T 11-11-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 SHALO_RS08765 9b756d778cc94775dadaaabe8ab8a568 858 SMART SM00957 6 386 2.7E-259 T 11-11-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 SHALO_RS08765 9b756d778cc94775dadaaabe8ab8a568 858 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 785 19.328 T 11-11-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SHALO_RS08765 9b756d778cc94775dadaaabe8ab8a568 858 Pfam PF02810 SEC-C motif 831 849 7.6E-10 T 11-11-2016 IPR004027 SEC-C motif SHALO_RS08765 9b756d778cc94775dadaaabe8ab8a568 858 Gene3D G3DSA:3.40.50.300 401 574 8.4E-81 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS08765 9b756d778cc94775dadaaabe8ab8a568 858 Pfam PF07516 SecA Wing and Scaffold domain 573 780 9.2E-55 T 11-11-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 SHALO_RS08765 9b756d778cc94775dadaaabe8ab8a568 858 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 501 6.1E-229 T 11-11-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SHALO_RS08765 9b756d778cc94775dadaaabe8ab8a568 858 SUPERFAMILY SSF52540 352 399 3.09E-77 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS08765 9b756d778cc94775dadaaabe8ab8a568 858 SUPERFAMILY SSF52540 4 230 3.09E-77 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS00730 6a6fedc8593174c45d7399bbca87ceb2 224 SUPERFAMILY SSF52172 1 180 3.7E-33 T 11-11-2016 IPR011006 CheY-like superfamily SHALO_RS00730 6a6fedc8593174c45d7399bbca87ceb2 224 SMART SM00448 4 115 1.0E-30 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS00730 6a6fedc8593174c45d7399bbca87ceb2 224 Gene3D G3DSA:1.10.10.10 151 222 2.5E-20 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS00730 6a6fedc8593174c45d7399bbca87ceb2 224 Gene3D G3DSA:3.40.50.2300 2 150 5.5E-31 T 11-11-2016 SHALO_RS00730 6a6fedc8593174c45d7399bbca87ceb2 224 SMART SM00862 150 221 3.6E-16 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS00730 6a6fedc8593174c45d7399bbca87ceb2 224 Pfam PF00072 Response regulator receiver domain 7 115 2.6E-22 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS00730 6a6fedc8593174c45d7399bbca87ceb2 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 221 3.5E-18 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS05930 a847edd334dff003a5d2ad413ea934af 179 Pfam PF04264 YceI-like domain 52 174 1.2E-14 T 11-11-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like SHALO_RS05930 a847edd334dff003a5d2ad413ea934af 179 SUPERFAMILY SSF101874 27 178 8.89E-22 T 11-11-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like SHALO_RS05930 a847edd334dff003a5d2ad413ea934af 179 SMART SM00867 23 177 0.0015 T 11-11-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like SHALO_RS05930 a847edd334dff003a5d2ad413ea934af 179 Gene3D G3DSA:2.40.128.110 36 178 6.6E-21 T 11-11-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like SHALO_RS11945 5c773c43276e2ae3983345da5fb3b5f8 907 Gene3D G3DSA:3.40.50.300 7 55 2.3E-47 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS11945 5c773c43276e2ae3983345da5fb3b5f8 907 Gene3D G3DSA:3.40.50.300 285 393 2.3E-47 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS11945 5c773c43276e2ae3983345da5fb3b5f8 907 Gene3D G3DSA:3.40.50.300 100 162 2.3E-47 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS11945 5c773c43276e2ae3983345da5fb3b5f8 907 Pfam PF12705 PD-(D/E)XK nuclease superfamily 740 897 2.3E-5 T 11-11-2016 SHALO_RS11945 5c773c43276e2ae3983345da5fb3b5f8 907 Pfam PF13361 UvrD-like helicase C-terminal domain 402 520 1.5E-8 T 11-11-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 SHALO_RS11945 5c773c43276e2ae3983345da5fb3b5f8 907 Pfam PF13361 UvrD-like helicase C-terminal domain 593 701 2.2E-8 T 11-11-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 SHALO_RS11945 5c773c43276e2ae3983345da5fb3b5f8 907 Gene3D G3DSA:3.40.50.300 600 706 1.8E-28 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS11945 5c773c43276e2ae3983345da5fb3b5f8 907 Gene3D G3DSA:3.40.50.300 403 495 1.8E-28 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS11945 5c773c43276e2ae3983345da5fb3b5f8 907 Pfam PF00580 UvrD/REP helicase N-terminal domain 8 394 7.9E-44 T 11-11-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 SHALO_RS11945 5c773c43276e2ae3983345da5fb3b5f8 907 SUPERFAMILY SSF52540 5 59 1.82E-77 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS11945 5c773c43276e2ae3983345da5fb3b5f8 907 SUPERFAMILY SSF52540 679 705 1.82E-77 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS11945 5c773c43276e2ae3983345da5fb3b5f8 907 SUPERFAMILY SSF52540 92 145 1.82E-77 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS11945 5c773c43276e2ae3983345da5fb3b5f8 907 SUPERFAMILY SSF52540 275 646 1.82E-77 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS11945 5c773c43276e2ae3983345da5fb3b5f8 907 SUPERFAMILY SSF52980 749 896 1.82E-9 T 11-11-2016 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 SHALO_RS02410 dd54af6d65c1d1257177514466391712 176 SUPERFAMILY SSF50104 119 175 4.96E-16 T 11-11-2016 IPR008991 Translation protein SH3-like domain SHALO_RS02410 dd54af6d65c1d1257177514466391712 176 PRINTS PR00338 Transcription termination factor NUSG signature 151 167 1.5E-15 T 11-11-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 SHALO_RS02410 dd54af6d65c1d1257177514466391712 176 PRINTS PR00338 Transcription termination factor NUSG signature 57 69 1.5E-15 T 11-11-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 SHALO_RS02410 dd54af6d65c1d1257177514466391712 176 PRINTS PR00338 Transcription termination factor NUSG signature 133 148 1.5E-15 T 11-11-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 SHALO_RS02410 dd54af6d65c1d1257177514466391712 176 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 2 175 20.91 T 11-11-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 SHALO_RS02410 dd54af6d65c1d1257177514466391712 176 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 5 175 5.0E-60 T 11-11-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 SHALO_RS02410 dd54af6d65c1d1257177514466391712 176 Pfam PF02357 Transcription termination factor nusG 4 106 5.0E-21 T 11-11-2016 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 SHALO_RS02410 dd54af6d65c1d1257177514466391712 176 Gene3D G3DSA:2.30.30.30 115 175 1.6E-26 T 11-11-2016 IPR014722 Ribosomal protein L2 domain 2 SHALO_RS02410 dd54af6d65c1d1257177514466391712 176 SMART SM00739 121 148 0.0019 T 11-11-2016 IPR005824 KOW SHALO_RS02410 dd54af6d65c1d1257177514466391712 176 ProSitePatterns PS01014 Transcription termination factor nusG signature. 158 167 - T 11-11-2016 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site SHALO_RS02410 dd54af6d65c1d1257177514466391712 176 SUPERFAMILY SSF82679 3 111 9.29E-30 T 11-11-2016 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 SHALO_RS02410 dd54af6d65c1d1257177514466391712 176 Gene3D G3DSA:3.30.70.940 3 112 1.0E-33 T 11-11-2016 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 SHALO_RS02410 dd54af6d65c1d1257177514466391712 176 SMART SM00738 2 110 7.0E-36 T 11-11-2016 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 SHALO_RS03480 a7e45d833c4d2848d3239c4178ef7f3f 208 Gene3D G3DSA:3.10.50.40 4 70 4.1E-19 T 11-11-2016 SHALO_RS03480 a7e45d833c4d2848d3239c4178ef7f3f 208 Gene3D G3DSA:3.10.50.40 123 140 4.1E-19 T 11-11-2016 SHALO_RS03480 a7e45d833c4d2848d3239c4178ef7f3f 208 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 5 99 7.4E-13 T 11-11-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 SHALO_RS03480 a7e45d833c4d2848d3239c4178ef7f3f 208 SUPERFAMILY SSF54534 3 141 6.09E-34 T 11-11-2016 SHALO_RS12435 7f60ebcfc4365f10def933ce36281745 302 PIRSF PIRSF038455 1 302 6.6E-79 T 11-11-2016 IPR025710 SoxAX cytochrome complex subunit A GO:0009055|GO:0016491|GO:0019417|GO:0020037|GO:0070069 SHALO_RS12435 7f60ebcfc4365f10def933ce36281745 302 SUPERFAMILY SSF46626 193 301 6.03E-27 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS12435 7f60ebcfc4365f10def933ce36281745 302 TIGRFAM TIGR04484 thiosulf_SoxA: sulfur oxidation c-type cytochrome SoxA 98 302 5.6E-66 T 11-11-2016 IPR025710 SoxAX cytochrome complex subunit A GO:0009055|GO:0016491|GO:0019417|GO:0020037|GO:0070069 SHALO_RS12435 7f60ebcfc4365f10def933ce36281745 302 Gene3D G3DSA:1.10.760.10 129 300 1.9E-48 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS12435 7f60ebcfc4365f10def933ce36281745 302 SUPERFAMILY SSF46626 76 187 3.53E-13 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS06220 2e6c56040fae516771cb734453bc465f 295 Pfam PF05235 CHAD domain 21 241 3.3E-31 T 11-11-2016 IPR007899 CHAD domain SHALO_RS06220 2e6c56040fae516771cb734453bc465f 295 SMART SM00880 20 270 1.8E-23 T 11-11-2016 IPR007899 CHAD domain SHALO_RS08660 04a9f476ded8c6aaa0e281e4e93d7b97 236 Pfam PF13649 Methyltransferase domain 55 150 8.5E-14 T 11-11-2016 SHALO_RS08660 04a9f476ded8c6aaa0e281e4e93d7b97 236 PIRSF PIRSF006325 1 235 1.1E-85 T 11-11-2016 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 SHALO_RS08660 04a9f476ded8c6aaa0e281e4e93d7b97 236 SUPERFAMILY SSF53335 14 234 1.08E-37 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS08660 04a9f476ded8c6aaa0e281e4e93d7b97 236 Hamap MF_01589 Carboxy-S-adenosyl-L-methionine synthase [cmoA]. 1 234 37.631 T 11-11-2016 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 SHALO_RS08660 04a9f476ded8c6aaa0e281e4e93d7b97 236 Gene3D G3DSA:3.40.50.150 14 234 1.3E-55 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS08660 04a9f476ded8c6aaa0e281e4e93d7b97 236 TIGRFAM TIGR00740 TIGR00740: tRNA (cmo5U34)-methyltransferase 2 234 9.6E-78 T 11-11-2016 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 SHALO_RS09440 e5b38a4ae288b71de289dad4e87fc55c 263 SUPERFAMILY SSF53474 9 261 5.63E-53 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold SHALO_RS09440 e5b38a4ae288b71de289dad4e87fc55c 263 PRINTS PR00412 Epoxide hydrolase signature 204 220 8.1E-7 T 11-11-2016 IPR000639 Epoxide hydrolase-like GO:0003824 SHALO_RS09440 e5b38a4ae288b71de289dad4e87fc55c 263 PRINTS PR00412 Epoxide hydrolase signature 237 259 8.1E-7 T 11-11-2016 IPR000639 Epoxide hydrolase-like GO:0003824 SHALO_RS09440 e5b38a4ae288b71de289dad4e87fc55c 263 PRINTS PR00412 Epoxide hydrolase signature 25 43 8.1E-7 T 11-11-2016 IPR000639 Epoxide hydrolase-like GO:0003824 SHALO_RS09440 e5b38a4ae288b71de289dad4e87fc55c 263 PRINTS PR00111 Alpha/beta hydrolase fold signature 44 59 1.5E-5 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 SHALO_RS09440 e5b38a4ae288b71de289dad4e87fc55c 263 PRINTS PR00111 Alpha/beta hydrolase fold signature 206 220 1.5E-5 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 SHALO_RS09440 e5b38a4ae288b71de289dad4e87fc55c 263 PRINTS PR00111 Alpha/beta hydrolase fold signature 89 102 1.5E-5 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 SHALO_RS09440 e5b38a4ae288b71de289dad4e87fc55c 263 Pfam PF00561 alpha/beta hydrolase fold 20 249 1.6E-20 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 SHALO_RS09440 e5b38a4ae288b71de289dad4e87fc55c 263 Gene3D G3DSA:3.40.50.1820 10 262 4.7E-55 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold SHALO_RS08730 068a112110a8e5a038870cda8f0328c6 124 Gene3D G3DSA:1.10.1660.10 10 102 4.7E-21 T 11-11-2016 SHALO_RS08730 068a112110a8e5a038870cda8f0328c6 124 SMART SM00422 10 79 5.9E-25 T 11-11-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SHALO_RS08730 068a112110a8e5a038870cda8f0328c6 124 SUPERFAMILY SSF46955 10 104 2.15E-18 T 11-11-2016 IPR009061 Putative DNA-binding domain SHALO_RS08730 068a112110a8e5a038870cda8f0328c6 124 Pfam PF13411 MerR HTH family regulatory protein 10 77 4.5E-17 T 11-11-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SHALO_RS06750 db4405bc6966f794b9824f0ade5a6d52 218 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 47 70 2.3E-9 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SHALO_RS06750 db4405bc6966f794b9824f0ade5a6d52 218 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 26 39 2.3E-9 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SHALO_RS06750 db4405bc6966f794b9824f0ade5a6d52 218 SUPERFAMILY SSF46689 16 85 3.74E-18 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 SHALO_RS06750 db4405bc6966f794b9824f0ade5a6d52 218 Pfam PF00440 Bacterial regulatory proteins, tetR family 26 71 6.6E-16 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SHALO_RS06750 db4405bc6966f794b9824f0ade5a6d52 218 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 160 212 7.8E-6 T 11-11-2016 SHALO_RS06750 db4405bc6966f794b9824f0ade5a6d52 218 Gene3D G3DSA:1.10.357.10 70 214 2.7E-21 T 11-11-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SHALO_RS06750 db4405bc6966f794b9824f0ade5a6d52 218 Gene3D G3DSA:1.10.10.60 17 69 1.2E-19 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 SHALO_RS04720 219e42289dc88cc8f762705d4b385734 364 Gene3D G3DSA:3.40.50.150 135 309 5.2E-21 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS04720 219e42289dc88cc8f762705d4b385734 364 SUPERFAMILY SSF53335 144 323 4.78E-23 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS04720 219e42289dc88cc8f762705d4b385734 364 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 248 254 - T 11-11-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 SHALO_RS04720 219e42289dc88cc8f762705d4b385734 364 Pfam PF05175 Methyltransferase small domain 175 299 7.7E-10 T 11-11-2016 IPR007848 Methyltransferase small domain GO:0008168 SHALO_RS01110 2a37e7f566652c98f6429f9feeb3feb8 445 PIRSF PIRSF000485 1 445 6.5E-167 T 11-11-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 SHALO_RS01110 2a37e7f566652c98f6429f9feeb3feb8 445 SUPERFAMILY SSF56235 2 222 1.89E-63 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SHALO_RS01110 2a37e7f566652c98f6429f9feeb3feb8 445 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 442 2.8E-158 T 11-11-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 SHALO_RS01110 2a37e7f566652c98f6429f9feeb3feb8 445 Pfam PF00156 Phosphoribosyl transferase domain 263 373 5.5E-8 T 11-11-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 SHALO_RS01110 2a37e7f566652c98f6429f9feeb3feb8 445 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 444 44.256 T 11-11-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 SHALO_RS01110 2a37e7f566652c98f6429f9feeb3feb8 445 SUPERFAMILY SSF53271 238 443 2.98E-65 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like SHALO_RS01110 2a37e7f566652c98f6429f9feeb3feb8 445 Gene3D G3DSA:3.60.20.10 2 245 2.6E-58 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SHALO_RS01110 2a37e7f566652c98f6429f9feeb3feb8 445 Pfam PF13537 Glutamine amidotransferase domain 71 199 4.2E-21 T 11-11-2016 IPR017932 Glutamine amidotransferase type 2 domain SHALO_RS01110 2a37e7f566652c98f6429f9feeb3feb8 445 Gene3D G3DSA:3.40.50.2020 258 425 1.2E-45 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like SHALO_RS02335 988ecb683ac05598d5bd714f72903c9d 376 SUPERFAMILY SSF53822 27 374 1.12E-81 T 11-11-2016 IPR028082 Periplasmic binding protein-like I SHALO_RS02335 988ecb683ac05598d5bd714f72903c9d 376 Pfam PF13458 Periplasmic binding protein 29 368 7.4E-61 T 11-11-2016 IPR028081 Leucine-binding protein domain SHALO_RS02335 988ecb683ac05598d5bd714f72903c9d 376 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 29 45 9.7E-12 T 11-11-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 SHALO_RS02335 988ecb683ac05598d5bd714f72903c9d 376 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 70 88 9.7E-12 T 11-11-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 SHALO_RS02335 988ecb683ac05598d5bd714f72903c9d 376 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 51 67 9.7E-12 T 11-11-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 SHALO_RS02335 988ecb683ac05598d5bd714f72903c9d 376 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 91 101 9.7E-12 T 11-11-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 SHALO_RS02335 988ecb683ac05598d5bd714f72903c9d 376 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 256 274 9.7E-12 T 11-11-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 SHALO_RS02335 988ecb683ac05598d5bd714f72903c9d 376 Gene3D G3DSA:3.40.50.2300 28 224 1.8E-55 T 11-11-2016 SHALO_RS06340 8f527f3e671ca49691272ce011e8c7ab 713 Pfam PF02743 Cache domain 53 332 1.1E-22 T 11-11-2016 IPR033479 Double Cache domain 1 SHALO_RS06340 8f527f3e671ca49691272ce011e8c7ab 713 SMART SM00283 458 712 1.2E-47 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SHALO_RS06340 8f527f3e671ca49691272ce011e8c7ab 713 Gene3D G3DSA:1.10.287.950 661 711 1.6E-46 T 11-11-2016 SHALO_RS06340 8f527f3e671ca49691272ce011e8c7ab 713 Gene3D G3DSA:1.10.287.950 471 625 1.6E-46 T 11-11-2016 SHALO_RS06340 8f527f3e671ca49691272ce011e8c7ab 713 SUPERFAMILY SSF58104 404 713 1.7E-59 T 11-11-2016 SHALO_RS06340 8f527f3e671ca49691272ce011e8c7ab 713 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 519 711 5.0E-42 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SHALO_RS06340 8f527f3e671ca49691272ce011e8c7ab 713 Gene3D G3DSA:3.30.450.20 205 342 6.6E-9 T 11-11-2016 SHALO_RS06340 8f527f3e671ca49691272ce011e8c7ab 713 SMART SM00304 382 436 3.6E-8 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SHALO_RS06340 8f527f3e671ca49691272ce011e8c7ab 713 Pfam PF00672 HAMP domain 362 431 8.5E-10 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SHALO_RS13340 c9636f50429782b5433fdf42c5189754 670 Gene3D G3DSA:2.40.170.20 144 670 1.3E-80 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SHALO_RS13340 c9636f50429782b5433fdf42c5189754 670 SUPERFAMILY SSF56935 26 670 8.06E-108 T 11-11-2016 SHALO_RS13340 c9636f50429782b5433fdf42c5189754 670 Pfam PF07715 TonB-dependent Receptor Plug Domain 40 139 8.3E-22 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SHALO_RS13340 c9636f50429782b5433fdf42c5189754 670 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 653 670 - T 11-11-2016 IPR010917 TonB-dependent receptor, conserved site SHALO_RS13340 c9636f50429782b5433fdf42c5189754 670 Gene3D G3DSA:2.170.130.10 20 143 3.1E-31 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SHALO_RS13340 c9636f50429782b5433fdf42c5189754 670 Pfam PF00593 TonB dependent receptor 429 669 5.6E-33 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SHALO_RS09825 09fdf1b8395e4944ee48f958423b0f7e 546 Pfam PF00474 Sodium:solute symporter family 59 465 5.6E-113 T 11-11-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 SHALO_RS09825 09fdf1b8395e4944ee48f958423b0f7e 546 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 59 462 1.0E-59 T 11-11-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 SHALO_RS09825 09fdf1b8395e4944ee48f958423b0f7e 546 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 174 199 - T 11-11-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 SHALO_RS03420 7f562c7313916dea506c836d97d9317a 171 Gene3D G3DSA:1.10.357.10 14 64 0.001 T 11-11-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SHALO_RS03420 7f562c7313916dea506c836d97d9317a 171 Pfam PF00430 ATP synthase B/B' CF(0) 31 138 2.8E-9 T 11-11-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 SHALO_RS03420 7f562c7313916dea506c836d97d9317a 171 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 170 8.474 T 11-11-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 SHALO_RS13560 14e985c49781fd1bec0e88f771222a22 167 Pfam PF13328 HD domain 3 138 7.5E-8 T 11-11-2016 IPR003607 HD/PDEase domain SHALO_RS13560 14e985c49781fd1bec0e88f771222a22 167 SUPERFAMILY SSF109604 3 145 8.17E-20 T 11-11-2016 SHALO_RS08150 94b0eb66613003f834a345dfbceec1dc 245 Pfam PF13144 Chaperone for flagella basal body P-ring formation 69 242 4.2E-22 T 11-11-2016 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal SHALO_RS08150 94b0eb66613003f834a345dfbceec1dc 245 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 110 243 2.1E-23 T 11-11-2016 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal SHALO_RS08885 a7f620cd6c8a397d4fca334a985425a2 623 Pfam PF00183 Hsp90 protein 208 623 3.7E-114 T 11-11-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 SHALO_RS08885 a7f620cd6c8a397d4fca334a985425a2 623 Gene3D G3DSA:3.30.565.10 2 236 1.1E-81 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS08885 a7f620cd6c8a397d4fca334a985425a2 623 SUPERFAMILY SSF55874 2 209 3.54E-67 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS08885 a7f620cd6c8a397d4fca334a985425a2 623 Hamap MF_00505 Chaperone protein HtpG [htpG]. 1 620 30.654 T 11-11-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 SHALO_RS08885 a7f620cd6c8a397d4fca334a985425a2 623 SUPERFAMILY SSF110942 508 620 1.01E-32 T 11-11-2016 SHALO_RS08885 a7f620cd6c8a397d4fca334a985425a2 623 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 22 31 - T 11-11-2016 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0006950|GO:0051082 SHALO_RS08885 a7f620cd6c8a397d4fca334a985425a2 623 SMART SM00387 24 179 9.0E-7 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS08885 a7f620cd6c8a397d4fca334a985425a2 623 PIRSF PIRSF002583 1 623 2.8E-211 T 11-11-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 SHALO_RS08885 a7f620cd6c8a397d4fca334a985425a2 623 PRINTS PR00775 90kDa heat shock protein signature 185 203 4.7E-63 T 11-11-2016 IPR020575 Heat shock protein Hsp90, N-terminal SHALO_RS08885 a7f620cd6c8a397d4fca334a985425a2 623 PRINTS PR00775 90kDa heat shock protein signature 2 22 4.7E-63 T 11-11-2016 IPR020575 Heat shock protein Hsp90, N-terminal SHALO_RS08885 a7f620cd6c8a397d4fca334a985425a2 623 PRINTS PR00775 90kDa heat shock protein signature 23 45 4.7E-63 T 11-11-2016 IPR020575 Heat shock protein Hsp90, N-terminal SHALO_RS08885 a7f620cd6c8a397d4fca334a985425a2 623 PRINTS PR00775 90kDa heat shock protein signature 90 107 4.7E-63 T 11-11-2016 IPR020575 Heat shock protein Hsp90, N-terminal SHALO_RS08885 a7f620cd6c8a397d4fca334a985425a2 623 PRINTS PR00775 90kDa heat shock protein signature 167 184 4.7E-63 T 11-11-2016 IPR020575 Heat shock protein Hsp90, N-terminal SHALO_RS08885 a7f620cd6c8a397d4fca334a985425a2 623 PRINTS PR00775 90kDa heat shock protein signature 72 89 4.7E-63 T 11-11-2016 IPR020575 Heat shock protein Hsp90, N-terminal SHALO_RS08885 a7f620cd6c8a397d4fca334a985425a2 623 PRINTS PR00775 90kDa heat shock protein signature 117 139 4.7E-63 T 11-11-2016 IPR020575 Heat shock protein Hsp90, N-terminal SHALO_RS08885 a7f620cd6c8a397d4fca334a985425a2 623 SUPERFAMILY SSF54211 231 483 3.11E-89 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SHALO_RS08885 a7f620cd6c8a397d4fca334a985425a2 623 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 22 162 2.0E-14 T 11-11-2016 SHALO_RS06105 ea932cbcb9c9f34781710fdf20a9e5b3 118 SUPERFAMILY SSF53146 2 113 1.57E-22 T 11-11-2016 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis SHALO_RS06105 ea932cbcb9c9f34781710fdf20a9e5b3 118 Gene3D G3DSA:3.30.420.130 1 113 4.8E-25 T 11-11-2016 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis SHALO_RS06105 ea932cbcb9c9f34781710fdf20a9e5b3 118 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 12 99 3.4E-13 T 11-11-2016 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis SHALO_RS09780 562402e6621571e183d23018d1acd33e 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 3 136 2.3E-47 T 11-11-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G SHALO_RS09780 562402e6621571e183d23018d1acd33e 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 148 243 3.9E-30 T 11-11-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G SHALO_RS09780 562402e6621571e183d23018d1acd33e 262 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 11-11-2016 IPR019776 Flagellar basal body rod protein, conserved site SHALO_RS09780 562402e6621571e183d23018d1acd33e 262 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 260 2.1E-113 T 11-11-2016 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 SHALO_RS09780 562402e6621571e183d23018d1acd33e 262 Pfam PF00460 Flagella basal body rod protein 5 35 7.3E-11 T 11-11-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 SHALO_RS09780 562402e6621571e183d23018d1acd33e 262 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 182 260 1.4E-24 T 11-11-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain SHALO_RS09780 562402e6621571e183d23018d1acd33e 262 SUPERFAMILY SSF117143 92 222 1.83E-37 T 11-11-2016 SHALO_RS00755 1e3cf6a90ecb1e7b9c973eacf77115a3 376 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 140 372 4.9E-82 T 11-11-2016 IPR003453 ABC transport permease subunit MlaE, Proteobacteria SHALO_RS00755 1e3cf6a90ecb1e7b9c973eacf77115a3 376 Pfam PF02405 Permease MlaE 160 370 1.8E-71 T 11-11-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 SHALO_RS00755 1e3cf6a90ecb1e7b9c973eacf77115a3 376 SUPERFAMILY SSF52091 7 96 3.73E-8 T 11-11-2016 IPR002645 STAS domain SHALO_RS00755 1e3cf6a90ecb1e7b9c973eacf77115a3 376 Gene3D G3DSA:3.30.750.24 8 96 3.8E-5 T 11-11-2016 IPR002645 STAS domain SHALO_RS08320 ddf20f038f36bef8ea81a2dd638a3ff1 428 Gene3D G3DSA:3.40.1350.10 66 129 1.5E-9 T 11-11-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 Reactome: R-HSA-6784531 SHALO_RS08320 ddf20f038f36bef8ea81a2dd638a3ff1 428 Pfam PF06114 Domain of unknown function (DUF955) 291 419 7.3E-14 T 11-11-2016 IPR010359 HTH domain, IrrE-type SHALO_RS08320 ddf20f038f36bef8ea81a2dd638a3ff1 428 SUPERFAMILY SSF52980 32 133 1.64E-6 T 11-11-2016 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 SHALO_RS08320 ddf20f038f36bef8ea81a2dd638a3ff1 428 Pfam PF04471 Restriction endonuclease 31 128 5.6E-8 T 11-11-2016 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 SHALO_RS06295 a62e11b89e3a3af4dcf72b9402678287 381 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 217 380 3.7E-51 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS06295 a62e11b89e3a3af4dcf72b9402678287 381 Pfam PF00990 Diguanylate cyclase, GGDEF domain 221 378 6.4E-45 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS06295 a62e11b89e3a3af4dcf72b9402678287 381 SUPERFAMILY SSF55073 226 380 3.14E-45 T 11-11-2016 IPR029787 Nucleotide cyclase SHALO_RS06295 a62e11b89e3a3af4dcf72b9402678287 381 SMART SM00267 210 381 4.6E-57 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS06295 a62e11b89e3a3af4dcf72b9402678287 381 Gene3D G3DSA:3.30.70.270 223 381 2.3E-48 T 11-11-2016 SHALO_RS06110 c7a1c55c3aae21e62680bcdbf6f87a28 143 PIRSF PIRSF005788 1 143 1.5E-41 T 11-11-2016 IPR004952 Uncharacterised protein family UPF0460 SHALO_RS06110 c7a1c55c3aae21e62680bcdbf6f87a28 143 Pfam PF03270 Protein of unknown function, DUF269 25 142 1.7E-39 T 11-11-2016 IPR004952 Uncharacterised protein family UPF0460 SHALO_RS01560 337157bfdbbc0fb7bcaef9ce4b9d1a2e 190 Pfam PF13247 4Fe-4S dicluster domain 53 148 3.5E-19 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_RS01560 337157bfdbbc0fb7bcaef9ce4b9d1a2e 190 Gene3D G3DSA:3.30.70.20 4 64 1.9E-32 T 11-11-2016 SHALO_RS01560 337157bfdbbc0fb7bcaef9ce4b9d1a2e 190 Gene3D G3DSA:3.30.70.20 133 187 1.9E-32 T 11-11-2016 SHALO_RS01560 337157bfdbbc0fb7bcaef9ce4b9d1a2e 190 Gene3D G3DSA:3.30.70.20 65 96 2.4E-13 T 11-11-2016 SHALO_RS01560 337157bfdbbc0fb7bcaef9ce4b9d1a2e 190 Gene3D G3DSA:3.30.70.20 97 132 3.7E-11 T 11-11-2016 SHALO_RS01560 337157bfdbbc0fb7bcaef9ce4b9d1a2e 190 SUPERFAMILY SSF54862 3 184 4.4E-61 T 11-11-2016 SHALO_RS01560 337157bfdbbc0fb7bcaef9ce4b9d1a2e 190 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 92 103 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_RS00635 326500235ddefbe4035a489100a2c22c 605 Gene3D G3DSA:3.30.930.10 210 496 5.5E-116 T 11-11-2016 SHALO_RS00635 326500235ddefbe4035a489100a2c22c 605 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 44 598 4.0E-217 T 11-11-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 SHALO_RS00635 326500235ddefbe4035a489100a2c22c 605 Gene3D G3DSA:3.40.50.800 500 603 4.1E-30 T 11-11-2016 IPR004154 Anticodon-binding SHALO_RS00635 326500235ddefbe4035a489100a2c22c 605 Gene3D G3DSA:3.30.980.10 156 192 3.3E-35 T 11-11-2016 SHALO_RS00635 326500235ddefbe4035a489100a2c22c 605 Gene3D G3DSA:3.30.980.10 38 101 3.3E-35 T 11-11-2016 SHALO_RS00635 326500235ddefbe4035a489100a2c22c 605 Gene3D G3DSA:3.30.54.20 103 155 5.7E-13 T 11-11-2016 SHALO_RS00635 326500235ddefbe4035a489100a2c22c 605 SUPERFAMILY SSF55681 211 494 3.06E-92 T 11-11-2016 SHALO_RS00635 326500235ddefbe4035a489100a2c22c 605 SUPERFAMILY SSF52954 495 603 8.76E-28 T 11-11-2016 IPR004154 Anticodon-binding SHALO_RS00635 326500235ddefbe4035a489100a2c22c 605 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 138 187 4.6E-14 T 11-11-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 SHALO_RS00635 326500235ddefbe4035a489100a2c22c 605 Pfam PF03129 Anticodon binding domain 509 597 1.6E-20 T 11-11-2016 IPR004154 Anticodon-binding SHALO_RS00635 326500235ddefbe4035a489100a2c22c 605 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 288 496 2.1E-42 T 11-11-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 SHALO_RS00635 326500235ddefbe4035a489100a2c22c 605 PRINTS PR01047 Threonyl-tRNA synthetase signature 298 326 2.6E-51 T 11-11-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 SHALO_RS00635 326500235ddefbe4035a489100a2c22c 605 PRINTS PR01047 Threonyl-tRNA synthetase signature 502 514 2.6E-51 T 11-11-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 SHALO_RS00635 326500235ddefbe4035a489100a2c22c 605 PRINTS PR01047 Threonyl-tRNA synthetase signature 331 354 2.6E-51 T 11-11-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 SHALO_RS00635 326500235ddefbe4035a489100a2c22c 605 PRINTS PR01047 Threonyl-tRNA synthetase signature 475 488 2.6E-51 T 11-11-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 SHALO_RS00635 326500235ddefbe4035a489100a2c22c 605 PRINTS PR01047 Threonyl-tRNA synthetase signature 432 460 2.6E-51 T 11-11-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 SHALO_RS00635 326500235ddefbe4035a489100a2c22c 605 SUPERFAMILY SSF55186 35 209 7.59E-55 T 11-11-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 SHALO_RS00635 326500235ddefbe4035a489100a2c22c 605 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 38 598 33.013 T 11-11-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 SHALO_RS00635 326500235ddefbe4035a489100a2c22c 605 SMART SM00863 138 187 7.6E-23 T 11-11-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 SHALO_RS12440 c5d67cc9447f072a85b88748fbf7933d 97 SUPERFAMILY SSF81296 7 96 7.7E-19 T 11-11-2016 IPR014756 Immunoglobulin E-set SHALO_RS12440 c5d67cc9447f072a85b88748fbf7933d 97 Pfam PF08770 Sulphur oxidation protein SoxZ 7 94 4.6E-26 T 11-11-2016 IPR014880 Sulphur oxidation protein SoxZ SHALO_RS12440 c5d67cc9447f072a85b88748fbf7933d 97 TIGRFAM TIGR04490 SoxZ_true: thiosulfate oxidation carrier complex protein SoxZ 5 94 6.1E-28 T 11-11-2016 IPR030995 Thiosulfate oxidation carrier complex protein SoxZ SHALO_RS12440 c5d67cc9447f072a85b88748fbf7933d 97 Gene3D G3DSA:2.60.40.10 4 96 6.0E-24 T 11-11-2016 IPR013783 Immunoglobulin-like fold SHALO_RS02250 5fde9cbd1e0acd305960bd6174c4f62a 246 SUPERFAMILY SSF53474 24 244 3.12E-34 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold SHALO_RS02250 5fde9cbd1e0acd305960bd6174c4f62a 246 Gene3D G3DSA:3.40.50.1820 24 242 1.9E-39 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold SHALO_RS02250 5fde9cbd1e0acd305960bd6174c4f62a 246 Pfam PF01738 Dienelactone hydrolase family 34 242 6.6E-37 T 11-11-2016 IPR002925 Dienelactone hydrolase GO:0016787 SHALO_RS00455 9a60fb581edaabc16eccaaa9196f7838 280 SUPERFAMILY SSF53448 6 277 2.93E-63 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases SHALO_RS00455 9a60fb581edaabc16eccaaa9196f7838 280 Pfam PF00483 Nucleotidyl transferase 14 274 9.3E-31 T 11-11-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 SHALO_RS00455 9a60fb581edaabc16eccaaa9196f7838 280 Gene3D G3DSA:3.90.550.10 8 278 8.6E-68 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases SHALO_RS00455 9a60fb581edaabc16eccaaa9196f7838 280 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 7 271 2.3E-121 T 11-11-2016 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343 SHALO_RS12030 d42164e8b214ae94745f9ec53af23e04 284 SUPERFAMILY SSF55681 5 279 1.73E-33 T 11-11-2016 SHALO_RS12030 d42164e8b214ae94745f9ec53af23e04 284 Gene3D G3DSA:3.30.930.10 3 281 1.5E-28 T 11-11-2016 SHALO_RS12030 d42164e8b214ae94745f9ec53af23e04 284 Pfam PF13393 Histidyl-tRNA synthetase 18 259 1.9E-18 T 11-11-2016 SHALO_RS09785 8c3e1fecfc3d198393062ea26f2e0157 267 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 11-11-2016 IPR019776 Flagellar basal body rod protein, conserved site SHALO_RS09785 8c3e1fecfc3d198393062ea26f2e0157 267 Pfam PF00460 Flagella basal body rod protein 9 35 1.4E-5 T 11-11-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 SHALO_RS09785 8c3e1fecfc3d198393062ea26f2e0157 267 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 189 249 1.1E-10 T 11-11-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain SHALO_RS09785 8c3e1fecfc3d198393062ea26f2e0157 267 SUPERFAMILY SSF117143 97 222 2.09E-12 T 11-11-2016 SHALO_RS09785 8c3e1fecfc3d198393062ea26f2e0157 267 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 5 140 5.4E-29 T 11-11-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G SHALO_RS02915 d4384dc8bf0eb36c37a4ed90971acef9 374 Gene3D G3DSA:3.30.1480.10 3 121 1.1E-21 T 11-11-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 SHALO_RS02915 d4384dc8bf0eb36c37a4ed90971acef9 374 Gene3D G3DSA:3.30.300.20 285 344 7.5E-19 T 11-11-2016 IPR015946 K homology domain-like, alpha/beta SHALO_RS02915 d4384dc8bf0eb36c37a4ed90971acef9 374 SUPERFAMILY SSF50249 132 192 1.21E-7 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold SHALO_RS02915 d4384dc8bf0eb36c37a4ed90971acef9 374 Pfam PF13184 NusA-like KH domain 235 303 1.9E-23 T 11-11-2016 IPR025249 KH domain, NusA-like GO:0003723 SHALO_RS02915 d4384dc8bf0eb36c37a4ed90971acef9 374 Pfam PF08529 NusA N-terminal domain 4 123 1.9E-18 T 11-11-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 SHALO_RS02915 d4384dc8bf0eb36c37a4ed90971acef9 374 Gene3D G3DSA:2.40.50.140 139 193 1.8E-12 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold SHALO_RS02915 d4384dc8bf0eb36c37a4ed90971acef9 374 SUPERFAMILY SSF69705 3 123 8.37E-25 T 11-11-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 SHALO_RS02915 d4384dc8bf0eb36c37a4ed90971acef9 374 SUPERFAMILY SSF54814 286 343 1.5E-9 T 11-11-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 SHALO_RS02915 d4384dc8bf0eb36c37a4ed90971acef9 374 Gene3D G3DSA:3.30.300.20 204 282 9.2E-30 T 11-11-2016 IPR015946 K homology domain-like, alpha/beta SHALO_RS02915 d4384dc8bf0eb36c37a4ed90971acef9 374 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 4 342 1.7E-100 T 11-11-2016 IPR010213 Transcription termination factor NusA GO:0003723 SHALO_RS02915 d4384dc8bf0eb36c37a4ed90971acef9 374 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 1 371 22.985 T 11-11-2016 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 SHALO_RS02915 d4384dc8bf0eb36c37a4ed90971acef9 374 SUPERFAMILY SSF54814 205 282 3.4E-25 T 11-11-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 SHALO_RS03220 a20c9b4eb55dda95b62faafb5fecd6a3 255 SUPERFAMILY SSF52540 2 251 3.16E-65 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS03220 a20c9b4eb55dda95b62faafb5fecd6a3 255 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHALO_RS03220 a20c9b4eb55dda95b62faafb5fecd6a3 255 Pfam PF00005 ABC transporter 19 178 2.6E-32 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_RS03220 a20c9b4eb55dda95b62faafb5fecd6a3 255 SMART SM00382 27 237 7.1E-8 T 11-11-2016 IPR003593 AAA+ ATPase domain SHALO_RS03220 a20c9b4eb55dda95b62faafb5fecd6a3 255 Gene3D G3DSA:3.40.50.300 2 248 8.8E-70 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS03220 a20c9b4eb55dda95b62faafb5fecd6a3 255 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 228 250 1.9E-6 T 11-11-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal SHALO_RS08945 0ace6cc831806fc75a422ae15d5abcf3 668 Gene3D G3DSA:3.90.1720.10 280 379 4.7E-14 T 11-11-2016 IPR000064 Endopeptidase, NLPC/P60 domain SHALO_RS08945 0ace6cc831806fc75a422ae15d5abcf3 668 Pfam PF12913 SH3 domain (SH3b1 type) 144 196 3.6E-25 T 11-11-2016 SHALO_RS08945 0ace6cc831806fc75a422ae15d5abcf3 668 SUPERFAMILY SSF54001 279 379 6.08E-12 T 11-11-2016 SHALO_RS08945 0ace6cc831806fc75a422ae15d5abcf3 668 Pfam PF12912 NLPC_P60 stabilising domain, N term 9 121 2.0E-22 T 11-11-2016 IPR025606 NLPC/P60, N-terminal domain SHALO_RS08945 0ace6cc831806fc75a422ae15d5abcf3 668 Pfam PF13539 D-alanyl-D-alanine carboxypeptidase 595 659 1.4E-19 T 11-11-2016 SHALO_RS08945 0ace6cc831806fc75a422ae15d5abcf3 668 Pfam PF12914 SH3 domain of SH3b2 type 208 249 1.1E-10 T 11-11-2016 IPR026864 SH3b2-type SH3 domain SHALO_RS08945 0ace6cc831806fc75a422ae15d5abcf3 668 Pfam PF00877 NlpC/P60 family 299 379 1.2E-9 T 11-11-2016 IPR000064 Endopeptidase, NLPC/P60 domain SHALO_RS08945 0ace6cc831806fc75a422ae15d5abcf3 668 SUPERFAMILY SSF55166 577 662 7.85E-21 T 11-11-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5658034 SHALO_RS05640 1ca113be152d250cbca894ce227caffa 88 SUPERFAMILY SSF46911 4 74 2.49E-23 T 11-11-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS05640 1ca113be152d250cbca894ce227caffa 88 Pfam PF01084 Ribosomal protein S18 18 68 1.7E-21 T 11-11-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS05640 1ca113be152d250cbca894ce227caffa 88 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 1 74 18.138 T 11-11-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS05640 1ca113be152d250cbca894ce227caffa 88 TIGRFAM TIGR00165 S18: ribosomal protein bS18 6 72 4.8E-30 T 11-11-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS05640 1ca113be152d250cbca894ce227caffa 88 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 74 8.0E-19 T 11-11-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS05640 1ca113be152d250cbca894ce227caffa 88 PRINTS PR00974 Ribosomal protein S18 family signature 29 39 3.3E-12 T 11-11-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS05640 1ca113be152d250cbca894ce227caffa 88 PRINTS PR00974 Ribosomal protein S18 family signature 39 46 3.3E-12 T 11-11-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS05640 1ca113be152d250cbca894ce227caffa 88 PRINTS PR00974 Ribosomal protein S18 family signature 47 61 3.3E-12 T 11-11-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS05640 1ca113be152d250cbca894ce227caffa 88 PRINTS PR00974 Ribosomal protein S18 family signature 61 71 3.3E-12 T 11-11-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS05640 1ca113be152d250cbca894ce227caffa 88 Gene3D G3DSA:4.10.640.10 9 74 1.1E-25 T 11-11-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS11710 f678112a0e4daf4a514fe3298ce6aee8 231 SUPERFAMILY SSF52821 78 224 6.02E-17 T 11-11-2016 IPR001763 Rhodanese-like domain SHALO_RS11710 f678112a0e4daf4a514fe3298ce6aee8 231 Pfam PF00581 Rhodanese-like domain 115 220 1.5E-9 T 11-11-2016 IPR001763 Rhodanese-like domain SHALO_RS11710 f678112a0e4daf4a514fe3298ce6aee8 231 SMART SM00450 102 225 4.8E-4 T 11-11-2016 IPR001763 Rhodanese-like domain SHALO_RS11710 f678112a0e4daf4a514fe3298ce6aee8 231 Gene3D G3DSA:3.40.250.10 104 220 5.1E-15 T 11-11-2016 IPR001763 Rhodanese-like domain SHALO_RS12585 7fc2413cf95d96449c01fe3edee330eb 219 SUPERFAMILY SSF47240 13 125 4.65E-9 T 11-11-2016 IPR009078 Ferritin-like superfamily SHALO_RS12585 7fc2413cf95d96449c01fe3edee330eb 219 Gene3D G3DSA:1.20.1260.10 10 123 1.7E-5 T 11-11-2016 IPR012347 Ferritin-related SHALO_RS08740 fda2593baf3cfff7d9744add74f2bb78 473 SMART SM00228 274 354 2.1E-9 T 11-11-2016 IPR001478 PDZ domain GO:0005515 SHALO_RS08740 fda2593baf3cfff7d9744add74f2bb78 473 SMART SM00228 383 465 0.0094 T 11-11-2016 IPR001478 PDZ domain GO:0005515 SHALO_RS08740 fda2593baf3cfff7d9744add74f2bb78 473 Gene3D G3DSA:2.40.10.10 42 162 7.6E-39 T 11-11-2016 SHALO_RS08740 fda2593baf3cfff7d9744add74f2bb78 473 Gene3D G3DSA:2.40.10.10 163 276 2.8E-42 T 11-11-2016 SHALO_RS08740 fda2593baf3cfff7d9744add74f2bb78 473 Pfam PF13365 Trypsin-like peptidase domain 100 235 6.1E-35 T 11-11-2016 SHALO_RS08740 fda2593baf3cfff7d9744add74f2bb78 473 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 43 471 2.3E-141 T 11-11-2016 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 SHALO_RS08740 fda2593baf3cfff7d9744add74f2bb78 473 SUPERFAMILY SSF50156 232 354 5.13E-20 T 11-11-2016 IPR001478 PDZ domain GO:0005515 SHALO_RS08740 fda2593baf3cfff7d9744add74f2bb78 473 SUPERFAMILY SSF50156 383 465 1.04E-11 T 11-11-2016 IPR001478 PDZ domain GO:0005515 SHALO_RS08740 fda2593baf3cfff7d9744add74f2bb78 473 Gene3D G3DSA:2.30.42.10 385 458 4.3E-13 T 11-11-2016 IPR001478 PDZ domain GO:0005515 SHALO_RS08740 fda2593baf3cfff7d9744add74f2bb78 473 PRINTS PR00834 HtrA/DegQ protease family signature 131 151 4.6E-53 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SHALO_RS08740 fda2593baf3cfff7d9744add74f2bb78 473 PRINTS PR00834 HtrA/DegQ protease family signature 109 121 4.6E-53 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SHALO_RS08740 fda2593baf3cfff7d9744add74f2bb78 473 PRINTS PR00834 HtrA/DegQ protease family signature 228 245 4.6E-53 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SHALO_RS08740 fda2593baf3cfff7d9744add74f2bb78 473 PRINTS PR00834 HtrA/DegQ protease family signature 171 195 4.6E-53 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SHALO_RS08740 fda2593baf3cfff7d9744add74f2bb78 473 PRINTS PR00834 HtrA/DegQ protease family signature 312 324 4.6E-53 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SHALO_RS08740 fda2593baf3cfff7d9744add74f2bb78 473 PRINTS PR00834 HtrA/DegQ protease family signature 206 223 4.6E-53 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SHALO_RS08740 fda2593baf3cfff7d9744add74f2bb78 473 Pfam PF13180 PDZ domain 274 363 5.8E-17 T 11-11-2016 IPR001478 PDZ domain GO:0005515 SHALO_RS08740 fda2593baf3cfff7d9744add74f2bb78 473 Pfam PF13180 PDZ domain 406 455 3.5E-7 T 11-11-2016 IPR001478 PDZ domain GO:0005515 SHALO_RS08740 fda2593baf3cfff7d9744add74f2bb78 473 Gene3D G3DSA:2.30.42.10 277 371 9.2E-22 T 11-11-2016 IPR001478 PDZ domain GO:0005515 SHALO_RS08740 fda2593baf3cfff7d9744add74f2bb78 473 SUPERFAMILY SSF50494 40 270 5.17E-64 T 11-11-2016 IPR009003 Peptidase S1, PA clan SHALO_RS03035 623f5037fab0157bb7ac54d82090ba58 291 PIRSF PIRSF028756 3 291 1.0E-82 T 11-11-2016 IPR016898 Polyphosphate kinase 2 SHALO_RS03035 623f5037fab0157bb7ac54d82090ba58 291 Gene3D G3DSA:3.40.50.300 4 287 2.4E-98 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS03035 623f5037fab0157bb7ac54d82090ba58 291 TIGRFAM TIGR03709 PPK2_rel_1: polyphosphate:nucleotide phosphotransferase, PPK2 family 6 279 1.4E-119 T 11-11-2016 IPR022300 Polyphosphate:nucleotide phosphotransferase, PPK2 GO:0006797|GO:0016776 SHALO_RS03035 623f5037fab0157bb7ac54d82090ba58 291 SUPERFAMILY SSF52540 69 256 7.97E-10 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS03035 623f5037fab0157bb7ac54d82090ba58 291 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 31 264 2.7E-66 T 11-11-2016 IPR022488 Polyphosphate kinase-2-related SHALO_RS15110 7cdc8985fbad4c87cddb0fd299510299 136 Pfam PF06271 RDD family 7 129 1.1E-14 T 11-11-2016 IPR010432 RDD SHALO_RS13770 d283e9bedc756f2a4c092a1e80b0cacf 355 SUPERFAMILY SSF53850 38 255 8.34E-37 T 11-11-2016 SHALO_RS13770 d283e9bedc756f2a4c092a1e80b0cacf 355 Pfam PF09084 NMT1/THI5 like 59 241 9.2E-10 T 11-11-2016 IPR015168 SsuA/THI5-like SHALO_RS13770 d283e9bedc756f2a4c092a1e80b0cacf 355 Gene3D G3DSA:3.40.190.10 129 238 7.3E-11 T 11-11-2016 SHALO_RS13770 d283e9bedc756f2a4c092a1e80b0cacf 355 TIGRFAM TIGR03427 ABC_peri_uca: ABC transporter periplasmic binding protein, urea carboxylase region 31 355 3.4E-169 T 11-11-2016 IPR017793 ABC transporter, urea utilisation-associated, substrate-binding protein SHALO_RS13770 d283e9bedc756f2a4c092a1e80b0cacf 355 Gene3D G3DSA:3.40.190.10 39 89 1.6E-4 T 11-11-2016 SHALO_RS02525 eee3c2f1ae94c01bcda0462f3be77c46 559 SUPERFAMILY SSF47384 324 397 4.71E-5 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS02525 eee3c2f1ae94c01bcda0462f3be77c46 559 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 442 548 1.2E-15 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS02525 eee3c2f1ae94c01bcda0462f3be77c46 559 SMART SM00387 439 551 4.6E-20 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS02525 eee3c2f1ae94c01bcda0462f3be77c46 559 SUPERFAMILY SSF55874 397 549 1.57E-32 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS02525 eee3c2f1ae94c01bcda0462f3be77c46 559 PRINTS PR00344 Bacterial sensor protein C-terminal signature 511 529 1.4E-13 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS02525 eee3c2f1ae94c01bcda0462f3be77c46 559 PRINTS PR00344 Bacterial sensor protein C-terminal signature 480 494 1.4E-13 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS02525 eee3c2f1ae94c01bcda0462f3be77c46 559 PRINTS PR00344 Bacterial sensor protein C-terminal signature 498 508 1.4E-13 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS02525 eee3c2f1ae94c01bcda0462f3be77c46 559 PRINTS PR00344 Bacterial sensor protein C-terminal signature 535 548 1.4E-13 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS02525 eee3c2f1ae94c01bcda0462f3be77c46 559 Gene3D G3DSA:3.30.565.10 399 548 8.5E-34 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS08045 f492e873d174bcc99187c44b0951e8b1 490 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 59 176 7.8E-15 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHALO_RS08045 f492e873d174bcc99187c44b0951e8b1 490 SUPERFAMILY SSF51905 59 164 4.92E-28 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHALO_RS08045 f492e873d174bcc99187c44b0951e8b1 490 SUPERFAMILY SSF51905 346 418 4.92E-28 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHALO_RS08045 f492e873d174bcc99187c44b0951e8b1 490 SUPERFAMILY SSF51905 227 317 2.85E-10 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHALO_RS08045 f492e873d174bcc99187c44b0951e8b1 490 Gene3D G3DSA:3.50.50.60 59 172 5.9E-52 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHALO_RS08045 f492e873d174bcc99187c44b0951e8b1 490 Gene3D G3DSA:3.50.50.60 352 420 5.9E-52 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHALO_RS02780 5cbf7775a649b6b1d535283548d92197 346 Pfam PF01594 Domain of unknown function DUF20 8 337 1.1E-37 T 11-11-2016 IPR002549 Transmembrane protein TqsA-like SHALO_RS06880 e9a57dbdacec34c49dd1f2320d288b80 99 Pfam PF10135 Rod binding protein 54 92 2.4E-6 T 11-11-2016 IPR019301 Flagellar protein FlgJ, N-terminal SHALO_RS06880 e9a57dbdacec34c49dd1f2320d288b80 99 ProDom PD351196 CJ1463 JHP0230 HP0245 26 98 2.0E-18 T 11-11-2016 SHALO_RS06435 6e9a97b78a37f3018a4a4b9fbfdfc6dc 162 Pfam PF13618 Gluconate 2-dehydrogenase subunit 3 31 145 1.4E-7 T 11-11-2016 IPR027056 Gluconate 2-dehydrogenase subunit 3 KEGG: 00030+1.1.99.3|MetaCyc: PWY-7165 SHALO_RS14305 df772ba0452036a97a8ffbe906c55a03 75 Pfam PF09834 Predicted membrane protein (DUF2061) 9 60 2.4E-23 T 11-11-2016 IPR018638 Domain of unknown function DUF2061, membrane SHALO_RS06995 0222c22d198550332d2bc1320365e063 125 Gene3D G3DSA:1.10.10.10 6 106 5.7E-36 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS06995 0222c22d198550332d2bc1320365e063 125 Pfam PF01638 HxlR-like helix-turn-helix 21 105 7.3E-30 T 11-11-2016 IPR002577 Helix-turn-helix, HxlR type SHALO_RS06995 0222c22d198550332d2bc1320365e063 125 SUPERFAMILY SSF46785 5 105 8.59E-31 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS03725 8577ba6469214807b97ab4c41e9d2989 546 Gene3D G3DSA:3.40.50.980 30 188 4.8E-29 T 11-11-2016 SHALO_RS03725 8577ba6469214807b97ab4c41e9d2989 546 Gene3D G3DSA:3.30.300.30 440 544 8.3E-24 T 11-11-2016 SHALO_RS03725 8577ba6469214807b97ab4c41e9d2989 546 SUPERFAMILY SSF56801 15 545 3.92E-123 T 11-11-2016 SHALO_RS03725 8577ba6469214807b97ab4c41e9d2989 546 Pfam PF13193 AMP-binding enzyme C-terminal domain 454 534 1.3E-13 T 11-11-2016 IPR025110 AMP-binding enzyme C-terminal domain SHALO_RS03725 8577ba6469214807b97ab4c41e9d2989 546 Gene3D G3DSA:2.30.38.10 364 439 7.2E-18 T 11-11-2016 SHALO_RS03725 8577ba6469214807b97ab4c41e9d2989 546 Gene3D G3DSA:3.40.50.980 189 346 5.1E-33 T 11-11-2016 SHALO_RS03725 8577ba6469214807b97ab4c41e9d2989 546 Pfam PF00501 AMP-binding enzyme 31 445 3.5E-89 T 11-11-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 SHALO_RS13805 0ce59ed596077bf158d3861f7660fa1f 227 Gene3D G3DSA:3.40.50.2300 4 127 1.1E-31 T 11-11-2016 SHALO_RS13805 0ce59ed596077bf158d3861f7660fa1f 227 Pfam PF00072 Response regulator receiver domain 8 117 7.7E-22 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS13805 0ce59ed596077bf158d3861f7660fa1f 227 SMART SM00448 6 116 4.6E-27 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS13805 0ce59ed596077bf158d3861f7660fa1f 227 Gene3D G3DSA:1.10.10.10 128 226 4.4E-30 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS13805 0ce59ed596077bf158d3861f7660fa1f 227 SUPERFAMILY SSF52172 4 175 4.32E-33 T 11-11-2016 IPR011006 CheY-like superfamily SHALO_RS13805 0ce59ed596077bf158d3861f7660fa1f 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 226 7.1E-22 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS13805 0ce59ed596077bf158d3861f7660fa1f 227 SMART SM00862 150 226 2.8E-21 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS13545 4facd89d7741cb793b2e87d31b1ff560 235 SUPERFAMILY SSF51182 4 232 4.02E-66 T 11-11-2016 IPR011051 RmlC-like cupin domain SHALO_RS13545 4facd89d7741cb793b2e87d31b1ff560 235 Gene3D G3DSA:2.60.120.10 5 233 1.4E-62 T 11-11-2016 IPR014710 RmlC-like jelly roll fold SHALO_RS13545 4facd89d7741cb793b2e87d31b1ff560 235 Pfam PF02678 Pirin 11 119 1.9E-30 T 11-11-2016 IPR003829 Pirin, N-terminal domain SHALO_RS13545 4facd89d7741cb793b2e87d31b1ff560 235 PIRSF PIRSF006232 2 233 9.8E-48 T 11-11-2016 IPR012093 Pirin SHALO_RS08675 a075ae5c11a79524406c4928165a10be 238 Pfam PF01728 FtsJ-like methyltransferase 56 183 2.2E-12 T 11-11-2016 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 SHALO_RS08675 a075ae5c11a79524406c4928165a10be 238 TIGRFAM TIGR00478 tly: TlyA family rRNA methyltransferase/putative hemolysin 2 228 1.3E-55 T 11-11-2016 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 SHALO_RS08675 a075ae5c11a79524406c4928165a10be 238 Gene3D G3DSA:3.40.50.150 86 151 4.0E-5 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS08675 a075ae5c11a79524406c4928165a10be 238 SMART SM00363 1 65 2.6E-13 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 SHALO_RS08675 a075ae5c11a79524406c4928165a10be 238 SUPERFAMILY SSF53335 52 234 2.82E-18 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS08675 a075ae5c11a79524406c4928165a10be 238 Pfam PF01479 S4 domain 1 48 4.2E-12 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 SHALO_RS08675 a075ae5c11a79524406c4928165a10be 238 Gene3D G3DSA:3.10.290.10 1 85 2.5E-20 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 SHALO_RS08675 a075ae5c11a79524406c4928165a10be 238 SUPERFAMILY SSF55174 1 57 1.77E-13 T 11-11-2016 SHALO_RS05955 f55762a2c6aa81ee964342d572e030a2 294 SMART SM00479 2 178 5.1E-14 T 11-11-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III SHALO_RS05955 f55762a2c6aa81ee964342d572e030a2 294 Gene3D G3DSA:3.30.420.10 1 178 4.0E-31 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SHALO_RS05955 f55762a2c6aa81ee964342d572e030a2 294 Pfam PF00929 Exonuclease 4 164 1.4E-13 T 11-11-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III SHALO_RS05955 f55762a2c6aa81ee964342d572e030a2 294 SUPERFAMILY SSF53098 1 203 7.59E-29 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SHALO_RS02670 867bb84f1582c9c39c56f7cf82a42187 324 Pfam PF00490 Delta-aminolevulinic acid dehydratase 3 319 1.3E-143 T 11-11-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 SHALO_RS02670 867bb84f1582c9c39c56f7cf82a42187 324 Gene3D G3DSA:3.20.20.70 2 323 1.0E-144 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_RS02670 867bb84f1582c9c39c56f7cf82a42187 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 188 207 3.4E-55 T 11-11-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 SHALO_RS02670 867bb84f1582c9c39c56f7cf82a42187 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 295 314 3.4E-55 T 11-11-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 SHALO_RS02670 867bb84f1582c9c39c56f7cf82a42187 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 118 132 3.4E-55 T 11-11-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 SHALO_RS02670 867bb84f1582c9c39c56f7cf82a42187 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 150 169 3.4E-55 T 11-11-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 SHALO_RS02670 867bb84f1582c9c39c56f7cf82a42187 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 265 280 3.4E-55 T 11-11-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 SHALO_RS02670 867bb84f1582c9c39c56f7cf82a42187 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 240 256 3.4E-55 T 11-11-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 SHALO_RS02670 867bb84f1582c9c39c56f7cf82a42187 324 SMART SM01004 1 321 8.1E-220 T 11-11-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 SHALO_RS02670 867bb84f1582c9c39c56f7cf82a42187 324 PIRSF PIRSF001415 1 324 7.4E-145 T 11-11-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 SHALO_RS02670 867bb84f1582c9c39c56f7cf82a42187 324 SUPERFAMILY SSF51569 2 322 4.1E-137 T 11-11-2016 SHALO_RS02670 867bb84f1582c9c39c56f7cf82a42187 324 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 240 252 - T 11-11-2016 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 SHALO_RS10190 02e2b450a6d2957f5bf56e11213f6fe6 286 PIRSF PIRSF006593 1 285 2.5E-80 T 11-11-2016 IPR014444 Uncharacterised conserved protein UCP006593 SHALO_RS10190 02e2b450a6d2957f5bf56e11213f6fe6 286 Pfam PF01937 Protein of unknown function DUF89 5 273 8.5E-45 T 11-11-2016 IPR002791 Domain of unknown function DUF89 SHALO_RS10190 02e2b450a6d2957f5bf56e11213f6fe6 286 SUPERFAMILY SSF111321 1 284 2.35E-76 T 11-11-2016 IPR002791 Domain of unknown function DUF89 SHALO_RS06815 4cf0b034610d31f43b3839cb5471fac3 432 Gene3D G3DSA:3.30.300.30 324 430 2.0E-33 T 11-11-2016 SHALO_RS06815 4cf0b034610d31f43b3839cb5471fac3 432 Pfam PF00501 AMP-binding enzyme 70 285 4.0E-13 T 11-11-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 SHALO_RS06815 4cf0b034610d31f43b3839cb5471fac3 432 Gene3D G3DSA:3.40.50.980 82 240 7.3E-13 T 11-11-2016 SHALO_RS06815 4cf0b034610d31f43b3839cb5471fac3 432 SUPERFAMILY SSF56801 36 393 4.32E-50 T 11-11-2016 SHALO_RS06815 4cf0b034610d31f43b3839cb5471fac3 432 PIRSF PIRSF006444 1 432 1.6E-190 T 11-11-2016 IPR011880 Phenylacetate-CoA ligase GO:0010124|GO:0047475 KEGG: 00360+6.2.1.30|MetaCyc: PWY-1341|MetaCyc: PWY-6318|MetaCyc: PWY-7716 SHALO_RS06815 4cf0b034610d31f43b3839cb5471fac3 432 Pfam PF14535 AMP-binding enzyme C-terminal domain 334 430 9.3E-29 T 11-11-2016 IPR028154 AMP-dependent ligase, C-terminal SHALO_RS13480 894fab5e9ffa8ca6be4d64a58570246d 239 SUPERFAMILY SSF89155 6 203 3.4E-30 T 11-11-2016 IPR020945 DMSO/Nitrate reductase chaperone SHALO_RS13480 894fab5e9ffa8ca6be4d64a58570246d 239 Pfam PF02613 Nitrate reductase delta subunit 67 168 3.7E-9 T 11-11-2016 IPR020945 DMSO/Nitrate reductase chaperone SHALO_RS13480 894fab5e9ffa8ca6be4d64a58570246d 239 Gene3D G3DSA:1.10.3480.10 2 200 1.7E-20 T 11-11-2016 IPR020945 DMSO/Nitrate reductase chaperone SHALO_RS02305 b9bf09a93914c0dfe4ed1e7faf5e2fcf 137 Pfam PF07366 SnoaL-like polyketide cyclase 10 132 5.5E-30 T 11-11-2016 IPR009959 Polyketide cyclase SnoaL-like domain SHALO_RS02305 b9bf09a93914c0dfe4ed1e7faf5e2fcf 137 SUPERFAMILY SSF54427 2 134 4.05E-34 T 11-11-2016 IPR032710 NTF2-like domain SHALO_RS02305 b9bf09a93914c0dfe4ed1e7faf5e2fcf 137 Gene3D G3DSA:3.10.450.50 4 135 7.3E-29 T 11-11-2016 IPR032710 NTF2-like domain SHALO_RS04745 fe3ebacdbf9d70a6f9d6cd77d3e6c8b9 548 SUPERFAMILY SSF81442 18 524 2.88E-165 T 11-11-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_RS04745 fe3ebacdbf9d70a6f9d6cd77d3e6c8b9 548 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 30 472 3.4E-136 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_RS04745 fe3ebacdbf9d70a6f9d6cd77d3e6c8b9 548 PRINTS PR01165 Cytochrome c oxidase subunit I signature 353 371 2.1E-94 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_RS04745 fe3ebacdbf9d70a6f9d6cd77d3e6c8b9 548 PRINTS PR01165 Cytochrome c oxidase subunit I signature 381 400 2.1E-94 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_RS04745 fe3ebacdbf9d70a6f9d6cd77d3e6c8b9 548 PRINTS PR01165 Cytochrome c oxidase subunit I signature 96 120 2.1E-94 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_RS04745 fe3ebacdbf9d70a6f9d6cd77d3e6c8b9 548 PRINTS PR01165 Cytochrome c oxidase subunit I signature 168 186 2.1E-94 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_RS04745 fe3ebacdbf9d70a6f9d6cd77d3e6c8b9 548 PRINTS PR01165 Cytochrome c oxidase subunit I signature 21 46 2.1E-94 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_RS04745 fe3ebacdbf9d70a6f9d6cd77d3e6c8b9 548 PRINTS PR01165 Cytochrome c oxidase subunit I signature 139 151 2.1E-94 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_RS04745 fe3ebacdbf9d70a6f9d6cd77d3e6c8b9 548 PRINTS PR01165 Cytochrome c oxidase subunit I signature 248 269 2.1E-94 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_RS04745 fe3ebacdbf9d70a6f9d6cd77d3e6c8b9 548 PRINTS PR01165 Cytochrome c oxidase subunit I signature 68 91 2.1E-94 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_RS04745 fe3ebacdbf9d70a6f9d6cd77d3e6c8b9 548 PRINTS PR01165 Cytochrome c oxidase subunit I signature 431 452 2.1E-94 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_RS04745 fe3ebacdbf9d70a6f9d6cd77d3e6c8b9 548 PRINTS PR01165 Cytochrome c oxidase subunit I signature 197 216 2.1E-94 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_RS04745 fe3ebacdbf9d70a6f9d6cd77d3e6c8b9 548 PRINTS PR01165 Cytochrome c oxidase subunit I signature 294 309 2.1E-94 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_RS04745 fe3ebacdbf9d70a6f9d6cd77d3e6c8b9 548 PRINTS PR01165 Cytochrome c oxidase subunit I signature 318 339 2.1E-94 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_RS04745 fe3ebacdbf9d70a6f9d6cd77d3e6c8b9 548 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 250 304 - T 11-11-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_RS04745 fe3ebacdbf9d70a6f9d6cd77d3e6c8b9 548 Gene3D G3DSA:1.20.210.10 16 532 9.2E-172 T 11-11-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_RS04085 556c12ee6325a7a1f5de0ffff3648afd 189 Pfam PF01965 DJ-1/PfpI family 3 163 1.8E-41 T 11-11-2016 IPR002818 DJ-1/PfpI SHALO_RS04085 556c12ee6325a7a1f5de0ffff3648afd 189 TIGRFAM TIGR01383 not_thiJ: DJ-1 family protein 3 176 3.6E-60 T 11-11-2016 IPR006287 Protein deglycase DJ-1 GO:0006517|GO:0030091 SHALO_RS04085 556c12ee6325a7a1f5de0ffff3648afd 189 Gene3D G3DSA:3.40.50.880 2 180 4.8E-52 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like SHALO_RS04085 556c12ee6325a7a1f5de0ffff3648afd 189 SUPERFAMILY SSF52317 2 180 1.56E-44 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like SHALO_RS11290 ced5724dbabc907aaa4f4a338268193d 79 Pfam PF03597 Cytochrome oxidase maturation protein cbb3-type 5 46 2.4E-13 T 11-11-2016 IPR004714 Cytochrome oxidase maturation protein cbb3-type SHALO_RS11290 ced5724dbabc907aaa4f4a338268193d 79 TIGRFAM TIGR00847 ccoS: cytochrome oxidase maturation protein, cbb3-type 9 38 5.4E-10 T 11-11-2016 IPR004714 Cytochrome oxidase maturation protein cbb3-type SHALO_RS08995 40b298265c5f6038afb3fce4b000856c 305 SUPERFAMILY SSF81799 109 205 3.92E-24 T 11-11-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SHALO_RS08995 40b298265c5f6038afb3fce4b000856c 305 SUPERFAMILY SSF53335 206 301 4.3E-36 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS08995 40b298265c5f6038afb3fce4b000856c 305 SUPERFAMILY SSF53335 4 109 4.3E-36 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS08995 40b298265c5f6038afb3fce4b000856c 305 PIRSF PIRSF004486 1 304 6.0E-97 T 11-11-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SHALO_RS08995 40b298265c5f6038afb3fce4b000856c 305 Pfam PF01795 MraW methylase family 3 302 8.6E-101 T 11-11-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SHALO_RS08995 40b298265c5f6038afb3fce4b000856c 305 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 4 301 6.0E-97 T 11-11-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SHALO_RS08995 40b298265c5f6038afb3fce4b000856c 305 Gene3D G3DSA:3.40.50.150 209 301 2.9E-41 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS08995 40b298265c5f6038afb3fce4b000856c 305 Gene3D G3DSA:3.40.50.150 5 106 2.9E-41 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS08995 40b298265c5f6038afb3fce4b000856c 305 Gene3D G3DSA:1.10.150.170 109 208 8.9E-28 T 11-11-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SHALO_RS08995 40b298265c5f6038afb3fce4b000856c 305 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 5 303 32.566 T 11-11-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SHALO_RS07075 a1297ec414df7e60669493a29037052a 733 Pfam PF07503 HypF finger 103 136 5.5E-18 T 11-11-2016 IPR011125 Zinc finger, HypF-type GO:0008270 SHALO_RS07075 a1297ec414df7e60669493a29037052a 733 Pfam PF07503 HypF finger 153 185 1.9E-17 T 11-11-2016 IPR011125 Zinc finger, HypF-type GO:0008270 SHALO_RS07075 a1297ec414df7e60669493a29037052a 733 Pfam PF01300 Telomere recombination 205 379 7.8E-52 T 11-11-2016 IPR006070 YrdC-like domain GO:0003725 SHALO_RS07075 a1297ec414df7e60669493a29037052a 733 TIGRFAM TIGR00143 hypF: carbamoyltransferase HypF 4 727 6.8E-240 T 11-11-2016 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 SHALO_RS07075 a1297ec414df7e60669493a29037052a 733 Gene3D G3DSA:3.90.870.10 196 375 9.2E-47 T 11-11-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain SHALO_RS07075 a1297ec414df7e60669493a29037052a 733 ProSitePatterns PS00150 Acylphosphatase signature 1. 5 15 - T 11-11-2016 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 SHALO_RS07075 a1297ec414df7e60669493a29037052a 733 SUPERFAMILY SSF54975 3 84 9.16E-19 T 11-11-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 SHALO_RS07075 a1297ec414df7e60669493a29037052a 733 Pfam PF00708 Acylphosphatase 3 84 1.5E-16 T 11-11-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 SHALO_RS07075 a1297ec414df7e60669493a29037052a 733 PIRSF PIRSF006256 1 733 2.4E-270 T 11-11-2016 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 SHALO_RS07075 a1297ec414df7e60669493a29037052a 733 SUPERFAMILY SSF55821 170 386 6.71E-46 T 11-11-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain SHALO_RS07075 a1297ec414df7e60669493a29037052a 733 Gene3D G3DSA:3.30.70.100 3 84 3.2E-20 T 11-11-2016 SHALO_RS14430 1bf23fc839df8dbfa80f56f10c356582 143 SUPERFAMILY SSF52788 1 137 7.06E-34 T 11-11-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily SHALO_RS14430 1bf23fc839df8dbfa80f56f10c356582 143 Gene3D G3DSA:3.40.50.270 1 137 6.8E-37 T 11-11-2016 SHALO_RS14430 1bf23fc839df8dbfa80f56f10c356582 143 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 4 132 8.0E-16 T 11-11-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily SHALO_RS14430 1bf23fc839df8dbfa80f56f10c356582 143 SMART SM00226 2 138 3.2E-29 T 11-11-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily SHALO_RS05205 9421b89f9aafdfa177b05c2dc143b0be 155 PIRSF PIRSF003174 1 154 1.6E-63 T 11-11-2016 IPR010292 Uncharacterised protein family CreA SHALO_RS05205 9421b89f9aafdfa177b05c2dc143b0be 155 Pfam PF05981 CreA protein 20 150 3.7E-57 T 11-11-2016 IPR010292 Uncharacterised protein family CreA SHALO_RS12660 12b55205b788f844138afadbac327c22 162 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 2 152 1.0E-26 T 11-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SHALO_RS12660 12b55205b788f844138afadbac327c22 162 Pfam PF08281 Sigma-70, region 4 100 150 1.6E-16 T 11-11-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SHALO_RS12660 12b55205b788f844138afadbac327c22 162 SUPERFAMILY SSF88946 2 85 4.32E-13 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SHALO_RS12660 12b55205b788f844138afadbac327c22 162 Gene3D G3DSA:1.10.1740.10 2 91 7.0E-13 T 11-11-2016 SHALO_RS12660 12b55205b788f844138afadbac327c22 162 Gene3D G3DSA:1.10.10.10 92 154 8.4E-16 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS12660 12b55205b788f844138afadbac327c22 162 SUPERFAMILY SSF88659 79 153 7.66E-15 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SHALO_RS12660 12b55205b788f844138afadbac327c22 162 Pfam PF04542 Sigma-70 region 2 2 67 4.4E-11 T 11-11-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SHALO_RS04920 51a549d6742dc0734fdac181d979fabe 296 Pfam PF02666 Phosphatidylserine decarboxylase 56 272 7.2E-54 T 11-11-2016 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 SHALO_RS04920 51a549d6742dc0734fdac181d979fabe 296 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 46 272 1.9E-67 T 11-11-2016 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 SHALO_RS08960 5b6d0bebeb3d07f73deac92b39045fe0 180 Gene3D G3DSA:3.40.30.10 4 165 9.4E-38 T 11-11-2016 IPR012336 Thioredoxin-like fold SHALO_RS08960 5b6d0bebeb3d07f73deac92b39045fe0 180 Hamap MF_00269 Probable thiol peroxidase [tpx]. 3 166 33.685 T 11-11-2016 IPR002065 Putative thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 SHALO_RS08960 5b6d0bebeb3d07f73deac92b39045fe0 180 Pfam PF08534 Redoxin 20 162 4.0E-18 T 11-11-2016 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 SHALO_RS08960 5b6d0bebeb3d07f73deac92b39045fe0 180 SUPERFAMILY SSF52833 4 163 1.62E-35 T 11-11-2016 IPR012336 Thioredoxin-like fold SHALO_RS08960 5b6d0bebeb3d07f73deac92b39045fe0 180 ProSitePatterns PS01265 Tpx family signature. 83 94 - T 11-11-2016 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 SHALO_RS01705 f8f76340e18553f9dfa82ac8ef25ab07 714 SUPERFAMILY SSF56935 26 217 6.72E-110 T 11-11-2016 SHALO_RS01705 f8f76340e18553f9dfa82ac8ef25ab07 714 SUPERFAMILY SSF56935 255 712 6.72E-110 T 11-11-2016 SHALO_RS01705 f8f76340e18553f9dfa82ac8ef25ab07 714 Gene3D G3DSA:2.40.170.20 154 713 2.0E-88 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SHALO_RS01705 f8f76340e18553f9dfa82ac8ef25ab07 714 Gene3D G3DSA:2.170.130.10 17 153 1.2E-35 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SHALO_RS01705 f8f76340e18553f9dfa82ac8ef25ab07 714 Pfam PF00593 TonB dependent receptor 464 712 5.3E-27 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SHALO_RS01705 f8f76340e18553f9dfa82ac8ef25ab07 714 Pfam PF07715 TonB-dependent Receptor Plug Domain 43 150 5.0E-23 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SHALO_RS02565 50c5f5b497aa944446621250c48c83e2 106 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 9 95 7.1E-21 T 11-11-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 SHALO_RS02565 50c5f5b497aa944446621250c48c83e2 106 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 4 102 18.239 T 11-11-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 SHALO_RS04960 1291236ff57ef50056675f7811a4822b 205 Pfam PF01810 LysE type translocator 12 201 2.4E-34 T 11-11-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 SHALO_RS04960 1291236ff57ef50056675f7811a4822b 205 PIRSF PIRSF006324 2 204 1.8E-48 T 11-11-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 SHALO_RS05720 579e8d5fbb1a93b063cee93a20efd16a 132 SMART SM00732 1 95 1.3E-16 T 11-11-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 SHALO_RS05720 579e8d5fbb1a93b063cee93a20efd16a 132 SUPERFAMILY SSF53098 3 126 4.93E-26 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SHALO_RS05720 579e8d5fbb1a93b063cee93a20efd16a 132 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 1 128 17.092 T 11-11-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 SHALO_RS05720 579e8d5fbb1a93b063cee93a20efd16a 132 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 4 125 8.5E-22 T 11-11-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 SHALO_RS05720 579e8d5fbb1a93b063cee93a20efd16a 132 Pfam PF03652 Holliday junction resolvase 3 125 2.2E-29 T 11-11-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 SHALO_RS05720 579e8d5fbb1a93b063cee93a20efd16a 132 Gene3D G3DSA:3.30.420.140 3 126 9.9E-32 T 11-11-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 SHALO_RS01950 cf912ec98f449d0cb278a9b699880ef8 244 SUPERFAMILY SSF102405 7 211 6.26E-55 T 11-11-2016 SHALO_RS01950 cf912ec98f449d0cb278a9b699880ef8 244 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 38 212 4.4E-43 T 11-11-2016 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG SHALO_RS01950 cf912ec98f449d0cb278a9b699880ef8 244 Gene3D G3DSA:3.40.50.450 18 216 3.5E-61 T 11-11-2016 SHALO_RS01950 cf912ec98f449d0cb278a9b699880ef8 244 Pfam PF03641 Possible lysine decarboxylase 80 211 1.7E-31 T 11-11-2016 IPR031100 LOG family SHALO_RS08340 f8dfa30f4fec63d4081d485dc04dc198 192 Pfam PF00849 RNA pseudouridylate synthase 11 142 2.0E-10 T 11-11-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 SHALO_RS08340 f8dfa30f4fec63d4081d485dc04dc198 192 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 50 64 - T 11-11-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 SHALO_RS08340 f8dfa30f4fec63d4081d485dc04dc198 192 Gene3D G3DSA:2.30.240.10 21 130 4.7E-5 T 11-11-2016 IPR007493 Protein of unknown function DUF538 SHALO_RS08340 f8dfa30f4fec63d4081d485dc04dc198 192 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 15 180 9.8E-37 T 11-11-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 SHALO_RS08340 f8dfa30f4fec63d4081d485dc04dc198 192 SUPERFAMILY SSF55120 9 189 2.24E-30 T 11-11-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SHALO_RS06980 607ce05f1cfec2376f785b1206d366e2 434 SUPERFAMILY SSF53448 1 247 5.25E-49 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases SHALO_RS06980 607ce05f1cfec2376f785b1206d366e2 434 Pfam PF12804 MobA-like NTP transferase domain 6 135 1.6E-11 T 11-11-2016 IPR025877 MobA-like NTP transferase SHALO_RS06980 607ce05f1cfec2376f785b1206d366e2 434 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 2 426 34.334 T 11-11-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587 SHALO_RS06980 607ce05f1cfec2376f785b1206d366e2 434 Gene3D G3DSA:3.90.550.10 2 245 9.8E-54 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases SHALO_RS06980 607ce05f1cfec2376f785b1206d366e2 434 SUPERFAMILY SSF51161 243 412 4.01E-37 T 11-11-2016 IPR011004 Trimeric LpxA-like SHALO_RS06980 607ce05f1cfec2376f785b1206d366e2 434 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 369 403 1.1E-8 T 11-11-2016 IPR001451 Hexapeptide repeat SHALO_RS06980 607ce05f1cfec2376f785b1206d366e2 434 Gene3D G3DSA:2.160.10.10 249 411 6.5E-34 T 11-11-2016 SHALO_RS06980 607ce05f1cfec2376f785b1206d366e2 434 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 377 405 - T 11-11-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 SHALO_RS06980 607ce05f1cfec2376f785b1206d366e2 434 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 4 426 6.5E-147 T 11-11-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587 SHALO_RS02210 e4d9e288c59a4dc4a90c32931b1853b3 187 SUPERFAMILY SSF82185 41 159 6.67E-27 T 11-11-2016 SHALO_RS02210 e4d9e288c59a4dc4a90c32931b1853b3 187 Pfam PF07661 MORN repeat variant 139 159 1.7E-4 T 11-11-2016 IPR011652 MORN variant SHALO_RS02210 e4d9e288c59a4dc4a90c32931b1853b3 187 Pfam PF07661 MORN repeat variant 91 111 0.016 T 11-11-2016 IPR011652 MORN variant SHALO_RS02210 e4d9e288c59a4dc4a90c32931b1853b3 187 Pfam PF07661 MORN repeat variant 115 133 1.9E-4 T 11-11-2016 IPR011652 MORN variant SHALO_RS02210 e4d9e288c59a4dc4a90c32931b1853b3 187 Pfam PF07661 MORN repeat variant 43 62 8.3E-4 T 11-11-2016 IPR011652 MORN variant SHALO_RS02210 e4d9e288c59a4dc4a90c32931b1853b3 187 Pfam PF07661 MORN repeat variant 66 87 9.9E-5 T 11-11-2016 IPR011652 MORN variant SHALO_RS02210 e4d9e288c59a4dc4a90c32931b1853b3 187 Gene3D G3DSA:2.20.110.10 41 161 4.6E-20 T 11-11-2016 SHALO_RS01580 329ae348214fea0ec7591f2f2749e1cb 188 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 91 102 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_RS01580 329ae348214fea0ec7591f2f2749e1cb 188 Gene3D G3DSA:3.30.70.20 96 131 1.1E-12 T 11-11-2016 SHALO_RS01580 329ae348214fea0ec7591f2f2749e1cb 188 Pfam PF13247 4Fe-4S dicluster domain 53 147 1.6E-20 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_RS01580 329ae348214fea0ec7591f2f2749e1cb 188 Gene3D G3DSA:3.30.70.20 4 64 6.4E-30 T 11-11-2016 SHALO_RS01580 329ae348214fea0ec7591f2f2749e1cb 188 Gene3D G3DSA:3.30.70.20 132 185 6.4E-30 T 11-11-2016 SHALO_RS01580 329ae348214fea0ec7591f2f2749e1cb 188 SUPERFAMILY SSF54862 2 184 2.41E-57 T 11-11-2016 SHALO_RS01580 329ae348214fea0ec7591f2f2749e1cb 188 Gene3D G3DSA:3.30.70.20 65 95 5.4E-11 T 11-11-2016 SHALO_RS07065 d7db9f0fe1ab1f8283c108729f2ba19d 179 Gene3D G3DSA:3.40.50.1450 2 164 1.1E-48 T 11-11-2016 IPR023430 Peptidase HybD-like domain SHALO_RS07065 d7db9f0fe1ab1f8283c108729f2ba19d 179 Pfam PF01750 Hydrogenase maturation protease 22 149 2.5E-27 T 11-11-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 SHALO_RS07065 d7db9f0fe1ab1f8283c108729f2ba19d 179 TIGRFAM TIGR00140 hupD: hydrogenase expression/formation protein 3 156 2.7E-45 T 11-11-2016 IPR004419 Peptidase A31, hydrogenase expression/formation protein GO:0016485|GO:0046872 SHALO_RS07065 d7db9f0fe1ab1f8283c108729f2ba19d 179 SUPERFAMILY SSF53163 2 164 8.11E-38 T 11-11-2016 IPR023430 Peptidase HybD-like domain SHALO_RS07065 d7db9f0fe1ab1f8283c108729f2ba19d 179 PRINTS PR00446 Hydrogen uptake protein signature 15 26 3.0E-13 T 11-11-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 SHALO_RS07065 d7db9f0fe1ab1f8283c108729f2ba19d 179 PRINTS PR00446 Hydrogen uptake protein signature 59 69 3.0E-13 T 11-11-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 SHALO_RS07065 d7db9f0fe1ab1f8283c108729f2ba19d 179 PRINTS PR00446 Hydrogen uptake protein signature 3 15 3.0E-13 T 11-11-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 SHALO_RS07065 d7db9f0fe1ab1f8283c108729f2ba19d 179 PRINTS PR00446 Hydrogen uptake protein signature 38 55 3.0E-13 T 11-11-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 SHALO_RS07065 d7db9f0fe1ab1f8283c108729f2ba19d 179 TIGRFAM TIGR00072 hydrog_prot: hydrogenase maturation protease 4 150 4.8E-35 T 11-11-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 SHALO_RS14295 da6263bfa7cc58ae9ddde1ec2998f86e 339 Pfam PF13343 Bacterial extracellular solute-binding protein 72 301 1.8E-27 T 11-11-2016 SHALO_RS14295 da6263bfa7cc58ae9ddde1ec2998f86e 339 Gene3D G3DSA:3.40.190.10 125 270 1.0E-50 T 11-11-2016 SHALO_RS14295 da6263bfa7cc58ae9ddde1ec2998f86e 339 SUPERFAMILY SSF53850 25 332 8.93E-80 T 11-11-2016 SHALO_RS14295 da6263bfa7cc58ae9ddde1ec2998f86e 339 PIRSF PIRSF002825 12 339 1.5E-83 T 11-11-2016 IPR026045 Ferric binding protein SHALO_RS14295 da6263bfa7cc58ae9ddde1ec2998f86e 339 Gene3D G3DSA:3.40.190.10 271 311 8.6E-32 T 11-11-2016 SHALO_RS14295 da6263bfa7cc58ae9ddde1ec2998f86e 339 Gene3D G3DSA:3.40.190.10 16 121 8.6E-32 T 11-11-2016 SHALO_RS00490 044c878a1bb49e5aee847cf8b80a0498 230 SUPERFAMILY SSF102114 29 196 3.92E-24 T 11-11-2016 SHALO_RS00490 044c878a1bb49e5aee847cf8b80a0498 230 Pfam PF04055 Radical SAM superfamily 33 169 2.8E-18 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SHALO_RS00490 044c878a1bb49e5aee847cf8b80a0498 230 TIGRFAM TIGR02495 NrdG2: anaerobic ribonucleoside-triphosphate reductase activating protein 11 198 6.6E-57 T 11-11-2016 IPR012840 Anaerobic ribonucleoside-triphosphate reductase activating protein SHALO_RS00490 044c878a1bb49e5aee847cf8b80a0498 230 Gene3D G3DSA:3.20.20.70 33 208 2.2E-29 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_RS00490 044c878a1bb49e5aee847cf8b80a0498 230 Pfam PF13353 4Fe-4S single cluster domain 29 124 6.7E-8 T 11-11-2016 SHALO_RS03345 733f6989b6ac0351ac08e233a16008b7 229 Pfam PF13649 Methyltransferase domain 40 127 8.8E-14 T 11-11-2016 SHALO_RS03345 733f6989b6ac0351ac08e233a16008b7 229 Gene3D G3DSA:3.40.50.150 18 154 9.6E-25 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS03345 733f6989b6ac0351ac08e233a16008b7 229 SUPERFAMILY SSF53335 13 201 2.61E-26 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS04175 4083cf319f04724c1ef6e65be694d8e1 383 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 50 374 5.5E-73 T 11-11-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 SHALO_RS04175 4083cf319f04724c1ef6e65be694d8e1 383 SUPERFAMILY SSF111369 56 298 2.35E-52 T 11-11-2016 SHALO_RS04175 4083cf319f04724c1ef6e65be694d8e1 383 Gene3D G3DSA:2.40.50.100 68 101 4.0E-18 T 11-11-2016 SHALO_RS04175 4083cf319f04724c1ef6e65be694d8e1 383 Gene3D G3DSA:2.40.50.100 176 208 4.0E-18 T 11-11-2016 SHALO_RS04175 4083cf319f04724c1ef6e65be694d8e1 383 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 68 294 6.9E-13 T 11-11-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SHALO_RS00875 d074b2097a9ed6726469ca748523c825 301 Pfam PF00892 EamA-like transporter family 11 140 1.2E-16 T 11-11-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SHALO_RS00875 d074b2097a9ed6726469ca748523c825 301 Pfam PF00892 EamA-like transporter family 149 283 4.2E-16 T 11-11-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SHALO_RS00875 d074b2097a9ed6726469ca748523c825 301 SUPERFAMILY SSF103481 203 288 5.89E-10 T 11-11-2016 SHALO_RS00875 d074b2097a9ed6726469ca748523c825 301 SUPERFAMILY SSF103481 44 143 1.44E-11 T 11-11-2016 SHALO_RS11155 58c49e0e5315f5fba9865151f16649f7 292 Gene3D G3DSA:3.30.360.10 139 262 9.8E-51 T 11-11-2016 SHALO_RS11155 58c49e0e5315f5fba9865151f16649f7 292 TIGRFAM TIGR03215 ac_ald_DH_ac: acetaldehyde dehydrogenase (acetylating) 2 286 7.7E-116 T 11-11-2016 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 SHALO_RS11155 58c49e0e5315f5fba9865151f16649f7 292 Pfam PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation 125 262 2.0E-51 T 11-11-2016 IPR015426 Acetaldehyde dehydrogenase, C-terminal GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 SHALO_RS11155 58c49e0e5315f5fba9865151f16649f7 292 Gene3D G3DSA:3.40.50.720 2 138 5.2E-57 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS11155 58c49e0e5315f5fba9865151f16649f7 292 SMART SM00859 4 117 2.7E-4 T 11-11-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 SHALO_RS11155 58c49e0e5315f5fba9865151f16649f7 292 SUPERFAMILY SSF55347 125 263 3.53E-47 T 11-11-2016 SHALO_RS11155 58c49e0e5315f5fba9865151f16649f7 292 Hamap MF_01657 Acetaldehyde dehydrogenase [mhpF]. 1 292 90.724 T 11-11-2016 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 SHALO_RS11155 58c49e0e5315f5fba9865151f16649f7 292 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 4 99 2.1E-10 T 11-11-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 SHALO_RS11155 58c49e0e5315f5fba9865151f16649f7 292 PIRSF PIRSF015689 1 292 1.6E-118 T 11-11-2016 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 SHALO_RS11155 58c49e0e5315f5fba9865151f16649f7 292 SUPERFAMILY SSF51735 1 150 1.29E-22 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS02825 40b4fc64c6badf7564df85db915e998d 214 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHALO_RS02825 40b4fc64c6badf7564df85db915e998d 214 SUPERFAMILY SSF52540 3 205 3.45E-49 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS02825 40b4fc64c6badf7564df85db915e998d 214 Gene3D G3DSA:3.40.50.300 3 205 4.1E-49 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS02825 40b4fc64c6badf7564df85db915e998d 214 Pfam PF00005 ABC transporter 19 160 2.7E-30 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_RS02825 40b4fc64c6badf7564df85db915e998d 214 SMART SM00382 27 211 5.5E-10 T 11-11-2016 IPR003593 AAA+ ATPase domain SHALO_RS05390 a83c12b72de6697a0bc6ed645e02360d 259 Pfam PF06739 Beta-propeller repeat 69 94 6.0E-5 T 11-11-2016 IPR010620 Beta-propeller repeat SHALO_RS05390 a83c12b72de6697a0bc6ed645e02360d 259 Gene3D G3DSA:2.120.10.30 25 257 8.3E-33 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like SHALO_RS05390 a83c12b72de6697a0bc6ed645e02360d 259 SUPERFAMILY SSF101898 25 257 7.06E-32 T 11-11-2016 SHALO_RS01455 a4b17f81eb8d0ea7e11053e863ab2ec8 456 SUPERFAMILY SSF51261 175 434 1.44E-49 T 11-11-2016 IPR011055 Duplicated hybrid motif SHALO_RS01455 a4b17f81eb8d0ea7e11053e863ab2ec8 456 Gene3D G3DSA:2.70.70.10 308 435 4.0E-34 T 11-11-2016 SHALO_RS01455 a4b17f81eb8d0ea7e11053e863ab2ec8 456 Pfam PF01551 Peptidase family M23 336 430 6.3E-23 T 11-11-2016 IPR016047 Peptidase M23 SHALO_RS07505 cc6b3fe5d1ccbd3ab603d26edfbe6775 555 Gene3D G3DSA:3.90.700.10 405 473 1.5E-27 T 11-11-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_RS07505 cc6b3fe5d1ccbd3ab603d26edfbe6775 555 Gene3D G3DSA:3.90.700.10 323 372 1.5E-27 T 11-11-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_RS07505 cc6b3fe5d1ccbd3ab603d26edfbe6775 555 Gene3D G3DSA:3.50.50.60 54 308 2.1E-58 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHALO_RS07505 cc6b3fe5d1ccbd3ab603d26edfbe6775 555 Gene3D G3DSA:3.50.50.60 480 543 2.1E-58 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHALO_RS07505 cc6b3fe5d1ccbd3ab603d26edfbe6775 555 SUPERFAMILY SSF51905 483 543 1.64E-37 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHALO_RS07505 cc6b3fe5d1ccbd3ab603d26edfbe6775 555 SUPERFAMILY SSF51905 57 313 1.64E-37 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHALO_RS07505 cc6b3fe5d1ccbd3ab603d26edfbe6775 555 Pfam PF00890 FAD binding domain 67 516 4.4E-42 T 11-11-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_RS07505 cc6b3fe5d1ccbd3ab603d26edfbe6775 555 SUPERFAMILY SSF56425 406 484 1.91E-24 T 11-11-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_RS07505 cc6b3fe5d1ccbd3ab603d26edfbe6775 555 SUPERFAMILY SSF56425 324 373 1.91E-24 T 11-11-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_RS07995 7526eeaaebe7ba600ab1e1791991a19e 337 SUPERFAMILY SSF52540 140 296 4.82E-5 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS07995 7526eeaaebe7ba600ab1e1791991a19e 337 SUPERFAMILY SSF52821 18 65 3.54E-19 T 11-11-2016 IPR001763 Rhodanese-like domain SHALO_RS07995 7526eeaaebe7ba600ab1e1791991a19e 337 SUPERFAMILY SSF52821 92 151 3.54E-19 T 11-11-2016 IPR001763 Rhodanese-like domain SHALO_RS07995 7526eeaaebe7ba600ab1e1791991a19e 337 Pfam PF00581 Rhodanese-like domain 18 128 1.9E-7 T 11-11-2016 IPR001763 Rhodanese-like domain SHALO_RS07995 7526eeaaebe7ba600ab1e1791991a19e 337 SMART SM00450 3 133 4.1E-7 T 11-11-2016 IPR001763 Rhodanese-like domain SHALO_RS07995 7526eeaaebe7ba600ab1e1791991a19e 337 TIGRFAM TIGR03167 tRNA_sel_U_synt: tRNA 2-selenouridine synthase 17 312 1.0E-93 T 11-11-2016 IPR017582 tRNA 2-selenouridine synthase GO:0016785|GO:0043828|GO:0070329 SHALO_RS07995 7526eeaaebe7ba600ab1e1791991a19e 337 Gene3D G3DSA:3.40.250.10 18 131 5.8E-28 T 11-11-2016 IPR001763 Rhodanese-like domain SHALO_RS14075 ea8b35e1e57d3e3bb093e6cd7837c6b7 125 PIRSF PIRSF009151 1 125 1.3E-37 T 11-11-2016 IPR008497 Protein of unknown function DUF779 SHALO_RS14075 ea8b35e1e57d3e3bb093e6cd7837c6b7 125 Pfam PF05610 Protein of unknown function (DUF779) 15 111 2.3E-36 T 11-11-2016 IPR008497 Protein of unknown function DUF779 SHALO_RS11220 5d2bf1de9e04313b4f9b8a07bdfe4eac 260 Gene3D G3DSA:3.30.420.10 2 211 7.0E-27 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SHALO_RS11220 5d2bf1de9e04313b4f9b8a07bdfe4eac 260 Pfam PF10108 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB 43 242 4.3E-71 T 11-11-2016 IPR019288 Predicted 3'-5' exonuclease, PolB-like SHALO_RS11220 5d2bf1de9e04313b4f9b8a07bdfe4eac 260 SUPERFAMILY SSF53098 2 219 5.48E-38 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SHALO_RS01655 553f6c5be5b81ca385b04e201c095f07 330 Hamap MF_01962 Adenine deaminase. 4 316 84.252 T 11-11-2016 IPR028892 Adenine deaminase type 2 GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 SHALO_RS01655 553f6c5be5b81ca385b04e201c095f07 330 SUPERFAMILY SSF51556 4 327 1.33E-87 T 11-11-2016 IPR032466 Metal-dependent hydrolase SHALO_RS01655 553f6c5be5b81ca385b04e201c095f07 330 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 8 325 2.0E-116 T 11-11-2016 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 SHALO_RS01655 553f6c5be5b81ca385b04e201c095f07 330 Gene3D G3DSA:3.20.20.140 4 325 4.0E-103 T 11-11-2016 SHALO_RS01655 553f6c5be5b81ca385b04e201c095f07 330 Pfam PF00962 Adenosine/AMP deaminase 8 323 5.9E-75 T 11-11-2016 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 SHALO_RS05915 96130acade178cf92905a3d680b23ad7 564 Gene3D G3DSA:3.40.50.720 399 533 4.5E-27 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS05915 96130acade178cf92905a3d680b23ad7 564 Pfam PF02254 TrkA-N domain 405 518 9.7E-19 T 11-11-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 SHALO_RS05915 96130acade178cf92905a3d680b23ad7 564 Pfam PF00999 Sodium/hydrogen exchanger family 10 373 8.4E-65 T 11-11-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 SHALO_RS05915 96130acade178cf92905a3d680b23ad7 564 SUPERFAMILY SSF51735 401 543 6.56E-25 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS05915 96130acade178cf92905a3d680b23ad7 564 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 13 285 1.8E-72 T 11-11-2016 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 SHALO_RS10630 d41dac859374f704f2c6abb792f30ed7 123 Pfam PF01230 HIT domain 3 86 6.7E-8 T 11-11-2016 IPR001310 Histidine triad (HIT) protein SHALO_RS10630 d41dac859374f704f2c6abb792f30ed7 123 Gene3D G3DSA:3.30.428.10 4 103 1.9E-25 T 11-11-2016 IPR011146 HIT-like domain GO:0003824 SHALO_RS10630 d41dac859374f704f2c6abb792f30ed7 123 PIRSF PIRSF000714 2 120 3.3E-36 T 11-11-2016 IPR026026 Histidine triad hydrolase, Hint-type SHALO_RS10630 d41dac859374f704f2c6abb792f30ed7 123 SUPERFAMILY SSF54197 4 121 1.05E-25 T 11-11-2016 IPR011146 HIT-like domain GO:0003824 SHALO_RS04995 cc233eb9a9a816907951fc245bd151da 437 SUPERFAMILY SSF56281 16 434 6.3E-98 T 11-11-2016 IPR001279 Metallo-beta-lactamase SHALO_RS04995 cc233eb9a9a816907951fc245bd151da 437 Gene3D G3DSA:3.60.15.10 172 291 1.2E-43 T 11-11-2016 IPR001279 Metallo-beta-lactamase SHALO_RS04995 cc233eb9a9a816907951fc245bd151da 437 Gene3D G3DSA:3.60.15.10 33 128 1.2E-43 T 11-11-2016 IPR001279 Metallo-beta-lactamase SHALO_RS04995 cc233eb9a9a816907951fc245bd151da 437 Pfam PF14863 Alkyl sulfatase dimerisation 300 434 3.7E-43 T 11-11-2016 IPR029228 Alkyl sulfatase dimerisation domain GO:0046983 SHALO_RS04995 cc233eb9a9a816907951fc245bd151da 437 Pfam PF00753 Metallo-beta-lactamase superfamily 50 262 7.5E-26 T 11-11-2016 IPR001279 Metallo-beta-lactamase SHALO_RS04995 cc233eb9a9a816907951fc245bd151da 437 SMART SM00849 49 262 1.8E-19 T 11-11-2016 IPR001279 Metallo-beta-lactamase SHALO_RS00190 2cac9dabf4e1c6888308409aa6db456c 185 Gene3D G3DSA:3.40.50.850 1 183 1.3E-47 T 11-11-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 SHALO_RS00190 2cac9dabf4e1c6888308409aa6db456c 185 SUPERFAMILY SSF52499 2 182 7.46E-48 T 11-11-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 SHALO_RS00190 2cac9dabf4e1c6888308409aa6db456c 185 Pfam PF00857 Isochorismatase family 4 150 1.1E-32 T 11-11-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 SHALO_RS11910 eb5ad43df0cef5762c0a81715d9e9e09 145 Gene3D G3DSA:3.90.10.10 47 135 1.2E-11 T 11-11-2016 SHALO_RS11910 eb5ad43df0cef5762c0a81715d9e9e09 145 SUPERFAMILY SSF48695 39 135 1.77E-14 T 11-11-2016 IPR011031 Multihaem cytochrome SHALO_RS11910 eb5ad43df0cef5762c0a81715d9e9e09 145 Pfam PF14537 Cytochrome c3 49 134 2.0E-15 T 11-11-2016 SHALO_RS12950 b8a57245b6857f614d7ce1b487e761d8 271 Gene3D G3DSA:3.40.190.10 118 220 6.9E-26 T 11-11-2016 SHALO_RS12950 b8a57245b6857f614d7ce1b487e761d8 271 SUPERFAMILY SSF53850 37 271 1.59E-42 T 11-11-2016 SHALO_RS12950 b8a57245b6857f614d7ce1b487e761d8 271 Gene3D G3DSA:3.40.190.10 1 112 4.8E-4 T 11-11-2016 SHALO_RS12950 b8a57245b6857f614d7ce1b487e761d8 271 Pfam PF03180 NLPA lipoprotein 55 271 3.6E-45 T 11-11-2016 IPR004872 Lipoprotein NlpA family SHALO_RS13415 4d602336660106db57cf8fe74afad5a8 69 Pfam PF03459 TOBE domain 5 65 1.7E-9 T 11-11-2016 IPR005116 Transport-associated OB, type 1 SHALO_RS13415 4d602336660106db57cf8fe74afad5a8 69 Gene3D G3DSA:2.40.50.100 1 66 2.3E-18 T 11-11-2016 SHALO_RS13415 4d602336660106db57cf8fe74afad5a8 69 SUPERFAMILY SSF50331 1 68 3.16E-14 T 11-11-2016 IPR008995 Molybdate/tungstate binding, C-terminal SHALO_RS03850 79e5ce26512364d15a24ceddd5170c4a 511 SUPERFAMILY SSF52317 6 225 5.53E-58 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like SHALO_RS03850 79e5ce26512364d15a24ceddd5170c4a 511 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 201 511 1.6E-147 T 11-11-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 SHALO_RS03850 79e5ce26512364d15a24ceddd5170c4a 511 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 77 93 1.1E-5 T 11-11-2016 SHALO_RS03850 79e5ce26512364d15a24ceddd5170c4a 511 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 6 20 1.1E-5 T 11-11-2016 SHALO_RS03850 79e5ce26512364d15a24ceddd5170c4a 511 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 47 61 1.1E-5 T 11-11-2016 SHALO_RS03850 79e5ce26512364d15a24ceddd5170c4a 511 SUPERFAMILY SSF52402 182 432 3.97E-54 T 11-11-2016 SHALO_RS03850 79e5ce26512364d15a24ceddd5170c4a 511 Gene3D G3DSA:3.40.50.620 196 383 9.7E-58 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHALO_RS03850 79e5ce26512364d15a24ceddd5170c4a 511 Pfam PF00117 Glutamine amidotransferase class-I 8 187 1.5E-42 T 11-11-2016 IPR017926 Glutamine amidotransferase SHALO_RS03850 79e5ce26512364d15a24ceddd5170c4a 511 Pfam PF02540 NAD synthase 208 264 1.5E-6 T 11-11-2016 IPR022310 NAD/GMP synthase SHALO_RS03850 79e5ce26512364d15a24ceddd5170c4a 511 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 3 511 53.153 T 11-11-2016 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 SHALO_RS03850 79e5ce26512364d15a24ceddd5170c4a 511 Gene3D G3DSA:3.40.50.880 6 192 3.9E-68 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like SHALO_RS03850 79e5ce26512364d15a24ceddd5170c4a 511 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 6 193 1.6E-75 T 11-11-2016 IPR004739 GMP synthase, N-terminal GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 SHALO_RS03850 79e5ce26512364d15a24ceddd5170c4a 511 PRINTS PR00096 Glutamine amidotransferase superfamily signature 165 178 2.2E-7 T 11-11-2016 SHALO_RS03850 79e5ce26512364d15a24ceddd5170c4a 511 PRINTS PR00096 Glutamine amidotransferase superfamily signature 77 88 2.2E-7 T 11-11-2016 SHALO_RS03850 79e5ce26512364d15a24ceddd5170c4a 511 PRINTS PR00096 Glutamine amidotransferase superfamily signature 50 59 2.2E-7 T 11-11-2016 SHALO_RS03850 79e5ce26512364d15a24ceddd5170c4a 511 PRINTS PR00097 Anthranilate synthase component II signature 77 88 8.9E-6 T 11-11-2016 SHALO_RS03850 79e5ce26512364d15a24ceddd5170c4a 511 PRINTS PR00097 Anthranilate synthase component II signature 165 178 8.9E-6 T 11-11-2016 SHALO_RS03850 79e5ce26512364d15a24ceddd5170c4a 511 PRINTS PR00097 Anthranilate synthase component II signature 50 59 8.9E-6 T 11-11-2016 SHALO_RS03850 79e5ce26512364d15a24ceddd5170c4a 511 SUPERFAMILY SSF54810 391 511 5.75E-48 T 11-11-2016 SHALO_RS03850 79e5ce26512364d15a24ceddd5170c4a 511 Pfam PF00958 GMP synthase C terminal domain 419 510 1.5E-42 T 11-11-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 SHALO_RS03850 79e5ce26512364d15a24ceddd5170c4a 511 Gene3D G3DSA:3.30.300.10 387 511 6.2E-50 T 11-11-2016 SHALO_RS12300 78d2595b9e3c4d670f1ef72e9579ee27 734 Pfam PF02421 Ferrous iron transport protein B 5 159 7.7E-57 T 11-11-2016 IPR011619 Ferrous iron transport protein B, N-terminal GO:0005525|GO:0015093|GO:0015684|GO:0016021 SHALO_RS12300 78d2595b9e3c4d670f1ef72e9579ee27 734 Gene3D G3DSA:3.40.50.300 3 169 2.8E-33 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS12300 78d2595b9e3c4d670f1ef72e9579ee27 734 SUPERFAMILY SSF52540 4 170 1.73E-34 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS12300 78d2595b9e3c4d670f1ef72e9579ee27 734 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 10 701 5.5E-184 T 11-11-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 SHALO_RS12300 78d2595b9e3c4d670f1ef72e9579ee27 734 Pfam PF07670 Nucleoside recognition 356 449 8.0E-14 T 11-11-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 SHALO_RS12300 78d2595b9e3c4d670f1ef72e9579ee27 734 Pfam PF07670 Nucleoside recognition 517 703 1.8E-32 T 11-11-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 SHALO_RS12300 78d2595b9e3c4d670f1ef72e9579ee27 734 Pfam PF07664 Ferrous iron transport protein B C terminus 460 512 1.6E-16 T 11-11-2016 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 SHALO_RS01770 b8d508de4ac4b278229011a96b71f8cc 147 Pfam PF05573 NosL 18 109 8.6E-7 T 11-11-2016 IPR008719 Nitrous oxide reductase accessory protein NosL SHALO_RS01770 b8d508de4ac4b278229011a96b71f8cc 147 SUPERFAMILY SSF160387 51 143 3.92E-11 T 11-11-2016 SHALO_RS09910 56d576faac9c06b56606f7c72bb7586d 459 Gene3D G3DSA:3.30.465.10 96 216 4.1E-41 T 11-11-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 SHALO_RS09910 56d576faac9c06b56606f7c72bb7586d 459 SUPERFAMILY SSF56176 6 216 4.35E-70 T 11-11-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 SHALO_RS09910 56d576faac9c06b56606f7c72bb7586d 459 Pfam PF02913 FAD linked oxidases, C-terminal domain 215 456 3.2E-65 T 11-11-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 SHALO_RS09910 56d576faac9c06b56606f7c72bb7586d 459 Gene3D G3DSA:1.10.45.10 418 459 1.9E-15 T 11-11-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 SHALO_RS09910 56d576faac9c06b56606f7c72bb7586d 459 Gene3D G3DSA:3.30.43.10 4 95 1.1E-30 T 11-11-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 SHALO_RS09910 56d576faac9c06b56606f7c72bb7586d 459 SUPERFAMILY SSF55103 220 458 7.85E-68 T 11-11-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 SHALO_RS09910 56d576faac9c06b56606f7c72bb7586d 459 Pfam PF01565 FAD binding domain 39 178 3.5E-42 T 11-11-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 SHALO_RS07970 e165edd2d1410ce7b502a525ef9753af 232 Gene3D G3DSA:3.40.50.150 15 220 2.8E-48 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS07970 e165edd2d1410ce7b502a525ef9753af 232 SUPERFAMILY SSF53335 3 176 9.5E-22 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS07970 e165edd2d1410ce7b502a525ef9753af 232 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 99 105 - T 11-11-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 SHALO_RS07970 e165edd2d1410ce7b502a525ef9753af 232 Pfam PF05175 Methyltransferase small domain 19 112 1.1E-17 T 11-11-2016 IPR007848 Methyltransferase small domain GO:0008168 SHALO_RS08640 9929ad1a5c9a944595fe2539ef2f5865 134 SUPERFAMILY SSF46785 3 132 5.45E-25 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS08640 9929ad1a5c9a944595fe2539ef2f5865 134 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 132 1.7E-31 T 11-11-2016 IPR000944 Transcription regulator Rrf2-type SHALO_RS08640 9929ad1a5c9a944595fe2539ef2f5865 134 Gene3D G3DSA:1.10.10.10 1 133 8.9E-28 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS08640 9929ad1a5c9a944595fe2539ef2f5865 134 Pfam PF02082 Transcriptional regulator 1 80 3.2E-18 T 11-11-2016 IPR000944 Transcription regulator Rrf2-type SHALO_RS10150 963398a65fd335472290c0276f904f3d 290 Gene3D G3DSA:3.40.50.1370 139 267 2.4E-43 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SHALO_RS10150 963398a65fd335472290c0276f904f3d 290 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 2 288 3.0E-100 T 11-11-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 SHALO_RS10150 963398a65fd335472290c0276f904f3d 290 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 146 285 2.3E-24 T 11-11-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 SHALO_RS10150 963398a65fd335472290c0276f904f3d 290 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 241 250 2.0E-20 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SHALO_RS10150 963398a65fd335472290c0276f904f3d 290 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 43 62 2.0E-20 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SHALO_RS10150 963398a65fd335472290c0276f904f3d 290 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 127 138 2.0E-20 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SHALO_RS10150 963398a65fd335472290c0276f904f3d 290 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 253 276 2.0E-20 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SHALO_RS10150 963398a65fd335472290c0276f904f3d 290 Gene3D G3DSA:3.40.50.1370 2 138 1.7E-51 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SHALO_RS10150 963398a65fd335472290c0276f904f3d 290 SUPERFAMILY SSF53671 2 289 3.93E-94 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SHALO_RS10150 963398a65fd335472290c0276f904f3d 290 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 1 290 39.557 T 11-11-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 SHALO_RS10150 963398a65fd335472290c0276f904f3d 290 PRINTS PR00101 Aspartate carbamoyltransferase signature 71 80 1.2E-31 T 11-11-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 SHALO_RS10150 963398a65fd335472290c0276f904f3d 290 PRINTS PR00101 Aspartate carbamoyltransferase signature 245 250 1.2E-31 T 11-11-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 SHALO_RS10150 963398a65fd335472290c0276f904f3d 290 PRINTS PR00101 Aspartate carbamoyltransferase signature 126 143 1.2E-31 T 11-11-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 SHALO_RS10150 963398a65fd335472290c0276f904f3d 290 PRINTS PR00101 Aspartate carbamoyltransferase signature 206 215 1.2E-31 T 11-11-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 SHALO_RS10150 963398a65fd335472290c0276f904f3d 290 PRINTS PR00101 Aspartate carbamoyltransferase signature 269 283 1.2E-31 T 11-11-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 SHALO_RS10150 963398a65fd335472290c0276f904f3d 290 PRINTS PR00101 Aspartate carbamoyltransferase signature 33 55 1.2E-31 T 11-11-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 SHALO_RS10150 963398a65fd335472290c0276f904f3d 290 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 43 50 - T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SHALO_RS10150 963398a65fd335472290c0276f904f3d 290 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 3 139 1.0E-42 T 11-11-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 SHALO_RS10175 2fa517f3962f90a4660b5276dae5b781 386 Gene3D G3DSA:3.40.640.10 56 266 3.2E-67 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SHALO_RS10175 2fa517f3962f90a4660b5276dae5b781 386 SUPERFAMILY SSF53383 3 385 2.23E-94 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase SHALO_RS10175 2fa517f3962f90a4660b5276dae5b781 386 Pfam PF00155 Aminotransferase class I and II 51 378 5.7E-32 T 11-11-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SHALO_RS10175 2fa517f3962f90a4660b5276dae5b781 386 Gene3D G3DSA:3.90.1150.10 267 385 3.0E-12 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SHALO_RS10465 38d4b071f9318befc63787bce8baef01 420 SUPERFAMILY SSF103473 9 415 3.79E-26 T 11-11-2016 IPR020846 Major facilitator superfamily domain SHALO_RS10465 38d4b071f9318befc63787bce8baef01 420 Gene3D G3DSA:1.20.1250.20 224 412 2.9E-13 T 11-11-2016 SHALO_RS10465 38d4b071f9318befc63787bce8baef01 420 Gene3D G3DSA:1.20.1250.20 10 195 5.3E-5 T 11-11-2016 SHALO_RS10465 38d4b071f9318befc63787bce8baef01 420 Pfam PF07690 Major Facilitator Superfamily 15 380 1.4E-13 T 11-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SHALO_RS00155 5e870e97ca441c609dc32ecb397db6c0 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 154 224 7.1E-8 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS00155 5e870e97ca441c609dc32ecb397db6c0 230 Gene3D G3DSA:3.40.50.2300 13 126 4.3E-30 T 11-11-2016 SHALO_RS00155 5e870e97ca441c609dc32ecb397db6c0 230 Pfam PF00072 Response regulator receiver domain 14 123 1.1E-23 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS00155 5e870e97ca441c609dc32ecb397db6c0 230 SUPERFAMILY SSF52172 12 187 2.99E-33 T 11-11-2016 IPR011006 CheY-like superfamily SHALO_RS00155 5e870e97ca441c609dc32ecb397db6c0 230 SMART SM00448 12 123 4.1E-26 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS00155 5e870e97ca441c609dc32ecb397db6c0 230 Gene3D G3DSA:1.10.10.10 140 225 1.2E-9 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS00155 5e870e97ca441c609dc32ecb397db6c0 230 SMART SM00862 154 224 8.8E-7 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS10195 30b79a6729dc8a418e8e70ac102d5fa7 118 PRINTS PR00061 Ribosomal protein L19 signature 36 65 2.1E-35 T 11-11-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS10195 30b79a6729dc8a418e8e70ac102d5fa7 118 PRINTS PR00061 Ribosomal protein L19 signature 6 35 2.1E-35 T 11-11-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS10195 30b79a6729dc8a418e8e70ac102d5fa7 118 PRINTS PR00061 Ribosomal protein L19 signature 91 116 2.1E-35 T 11-11-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS10195 30b79a6729dc8a418e8e70ac102d5fa7 118 PIRSF PIRSF002191 1 118 3.6E-43 T 11-11-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS10195 30b79a6729dc8a418e8e70ac102d5fa7 118 ProSitePatterns PS01015 Ribosomal protein L19 signature. 89 104 - T 11-11-2016 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_RS10195 30b79a6729dc8a418e8e70ac102d5fa7 118 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 4 116 3.2E-46 T 11-11-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS10195 30b79a6729dc8a418e8e70ac102d5fa7 118 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 3 117 30.469 T 11-11-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS10195 30b79a6729dc8a418e8e70ac102d5fa7 118 SUPERFAMILY SSF50104 2 117 7.82E-40 T 11-11-2016 IPR008991 Translation protein SH3-like domain SHALO_RS10195 30b79a6729dc8a418e8e70ac102d5fa7 118 Pfam PF01245 Ribosomal protein L19 5 115 2.5E-43 T 11-11-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS07865 02b490380e131fde7b0c91ed27707995 404 Gene3D G3DSA:1.20.1250.20 13 193 1.3E-24 T 11-11-2016 SHALO_RS07865 02b490380e131fde7b0c91ed27707995 404 Gene3D G3DSA:1.20.1250.20 211 396 3.7E-12 T 11-11-2016 SHALO_RS07865 02b490380e131fde7b0c91ed27707995 404 Pfam PF07690 Major Facilitator Superfamily 274 400 1.2E-8 T 11-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SHALO_RS07865 02b490380e131fde7b0c91ed27707995 404 Pfam PF07690 Major Facilitator Superfamily 18 270 1.3E-18 T 11-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SHALO_RS07865 02b490380e131fde7b0c91ed27707995 404 SUPERFAMILY SSF103473 11 400 1.7E-40 T 11-11-2016 IPR020846 Major facilitator superfamily domain SHALO_RS07915 ad95d295b93402126d9fc1a23e249343 361 Gene3D G3DSA:1.10.3720.10 152 357 1.0E-38 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHALO_RS07915 ad95d295b93402126d9fc1a23e249343 361 SUPERFAMILY SSF161098 152 342 1.44E-37 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHALO_RS07915 ad95d295b93402126d9fc1a23e249343 361 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 170 356 6.7E-23 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHALO_RS07915 ad95d295b93402126d9fc1a23e249343 361 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 152 248 1.8E-20 T 11-11-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 SHALO_RS11765 80284f5d7bdaa81e6ec6a07d9a54bf68 245 Gene3D G3DSA:3.60.21.10 4 123 3.0E-32 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like SHALO_RS11765 80284f5d7bdaa81e6ec6a07d9a54bf68 245 Gene3D G3DSA:3.60.21.10 186 242 3.0E-32 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like SHALO_RS11765 80284f5d7bdaa81e6ec6a07d9a54bf68 245 SUPERFAMILY SSF56300 182 242 4.56E-31 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like SHALO_RS11765 80284f5d7bdaa81e6ec6a07d9a54bf68 245 SUPERFAMILY SSF56300 3 125 4.56E-31 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like SHALO_RS11765 80284f5d7bdaa81e6ec6a07d9a54bf68 245 Pfam PF00149 Calcineurin-like phosphoesterase 4 205 3.3E-12 T 11-11-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 SHALO_RS06755 e9ef3eba71f057fc09462006a9faf144 386 Gene3D G3DSA:2.40.50.100 179 211 4.6E-17 T 11-11-2016 SHALO_RS06755 e9ef3eba71f057fc09462006a9faf144 386 Gene3D G3DSA:2.40.50.100 70 104 4.6E-17 T 11-11-2016 SHALO_RS06755 e9ef3eba71f057fc09462006a9faf144 386 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 69 301 2.8E-11 T 11-11-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SHALO_RS06755 e9ef3eba71f057fc09462006a9faf144 386 SUPERFAMILY SSF111369 59 306 2.09E-60 T 11-11-2016 SHALO_RS06755 e9ef3eba71f057fc09462006a9faf144 386 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 46 381 2.9E-71 T 11-11-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 SHALO_RS10980 32ff2450c562ed5e7bc91a4da84cde4d 135 Gene3D G3DSA:1.10.940.10 3 134 7.1E-41 T 11-11-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 SHALO_RS10980 32ff2450c562ed5e7bc91a4da84cde4d 135 Pfam PF01029 NusB family 5 128 4.1E-32 T 11-11-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 SHALO_RS10980 32ff2450c562ed5e7bc91a4da84cde4d 135 Hamap MF_00073 N utilization substance protein B homolog [nusB]. 2 133 21.519 T 11-11-2016 IPR011605 NusB antitermination factor GO:0006353 SHALO_RS10980 32ff2450c562ed5e7bc91a4da84cde4d 135 SUPERFAMILY SSF48013 3 131 4.45E-36 T 11-11-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 SHALO_RS10980 32ff2450c562ed5e7bc91a4da84cde4d 135 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 4 130 2.7E-38 T 11-11-2016 IPR011605 NusB antitermination factor GO:0006353 SHALO_RS04985 6ca36cd4a1d661826f9ab5e9f91138aa 472 Pfam PF13581 Histidine kinase-like ATPase domain 349 468 7.3E-7 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS04985 6ca36cd4a1d661826f9ab5e9f91138aa 472 Gene3D G3DSA:3.30.565.10 346 468 5.9E-11 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS04985 6ca36cd4a1d661826f9ab5e9f91138aa 472 SUPERFAMILY SSF55874 346 467 4.06E-19 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS04985 6ca36cd4a1d661826f9ab5e9f91138aa 472 Pfam PF07730 Histidine kinase 276 340 2.2E-12 T 11-11-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 SHALO_RS04985 6ca36cd4a1d661826f9ab5e9f91138aa 472 SMART SM00387 379 472 8.8E-4 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS06370 66dfccce79aa01b2233f5d28add06c69 135 SUPERFAMILY SSF55298 5 134 1.73E-24 T 11-11-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like SHALO_RS06370 66dfccce79aa01b2233f5d28add06c69 135 Gene3D G3DSA:3.30.1330.40 6 134 6.0E-28 T 11-11-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like SHALO_RS06370 66dfccce79aa01b2233f5d28add06c69 135 Pfam PF01042 Endoribonuclease L-PSP 20 131 1.6E-17 T 11-11-2016 IPR006175 YjgF/YER057c/UK114 family SHALO_RS12310 290c802abf614fb34bf5b56a78077672 227 Pfam PF14622 Ribonuclease-III-like 18 136 8.1E-32 T 11-11-2016 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 SHALO_RS12310 290c802abf614fb34bf5b56a78077672 227 Gene3D G3DSA:1.10.1520.10 3 150 1.2E-45 T 11-11-2016 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 SHALO_RS12310 290c802abf614fb34bf5b56a78077672 227 SUPERFAMILY SSF69065 2 153 2.79E-46 T 11-11-2016 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 SHALO_RS12310 290c802abf614fb34bf5b56a78077672 227 SMART SM00535 20 149 1.2E-47 T 11-11-2016 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 SHALO_RS12310 290c802abf614fb34bf5b56a78077672 227 Pfam PF00035 Double-stranded RNA binding motif 157 222 3.6E-15 T 11-11-2016 IPR014720 Double-stranded RNA-binding domain SHALO_RS12310 290c802abf614fb34bf5b56a78077672 227 ProSitePatterns PS00517 Ribonuclease III family signature. 38 46 - T 11-11-2016 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 SHALO_RS12310 290c802abf614fb34bf5b56a78077672 227 Hamap MF_00104 Ribonuclease 3 [rnc]. 8 219 29.155 T 11-11-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 SHALO_RS12310 290c802abf614fb34bf5b56a78077672 227 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 8 220 9.2E-71 T 11-11-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 SHALO_RS12310 290c802abf614fb34bf5b56a78077672 227 SMART SM00358 156 223 7.7E-18 T 11-11-2016 IPR014720 Double-stranded RNA-binding domain SHALO_RS12310 290c802abf614fb34bf5b56a78077672 227 Gene3D G3DSA:3.30.160.20 155 221 2.0E-24 T 11-11-2016 IPR014720 Double-stranded RNA-binding domain SHALO_RS12310 290c802abf614fb34bf5b56a78077672 227 SUPERFAMILY SSF54768 110 223 1.19E-23 T 11-11-2016 SHALO_RS11495 a82863630bafab11b8c91c82561ffdbf 1007 Gene3D G3DSA:2.40.40.20 843 1006 1.1E-17 T 11-11-2016 SHALO_RS11495 a82863630bafab11b8c91c82561ffdbf 1007 SUPERFAMILY SSF50692 874 1007 4.07E-15 T 11-11-2016 IPR009010 Aspartate decarboxylase-like domain SHALO_RS11495 a82863630bafab11b8c91c82561ffdbf 1007 Pfam PF01568 Molydopterin dinucleotide binding domain 877 974 9.3E-10 T 11-11-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 SHALO_RS11495 a82863630bafab11b8c91c82561ffdbf 1007 SUPERFAMILY SSF53706 68 106 3.38E-103 T 11-11-2016 SHALO_RS11495 a82863630bafab11b8c91c82561ffdbf 1007 SUPERFAMILY SSF53706 135 837 3.38E-103 T 11-11-2016 SHALO_RS11495 a82863630bafab11b8c91c82561ffdbf 1007 Gene3D G3DSA:3.40.50.740 156 262 1.0E-30 T 11-11-2016 SHALO_RS11495 a82863630bafab11b8c91c82561ffdbf 1007 Gene3D G3DSA:3.40.50.740 613 668 1.0E-30 T 11-11-2016 SHALO_RS11495 a82863630bafab11b8c91c82561ffdbf 1007 Gene3D G3DSA:3.40.50.740 700 720 1.0E-30 T 11-11-2016 SHALO_RS11495 a82863630bafab11b8c91c82561ffdbf 1007 Gene3D G3DSA:3.40.228.10 270 374 5.2E-40 T 11-11-2016 SHALO_RS11495 a82863630bafab11b8c91c82561ffdbf 1007 Gene3D G3DSA:3.40.228.10 449 612 5.2E-40 T 11-11-2016 SHALO_RS11495 a82863630bafab11b8c91c82561ffdbf 1007 Gene3D G3DSA:2.20.25.90 69 155 5.7E-7 T 11-11-2016 SHALO_RS11495 a82863630bafab11b8c91c82561ffdbf 1007 SMART SM00926 67 151 2.0E-7 T 11-11-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS11495 a82863630bafab11b8c91c82561ffdbf 1007 Pfam PF00384 Molybdopterin oxidoreductase 213 672 2.8E-13 T 11-11-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS11465 36a2b6e2a71685fb8b7985d70e1cf887 269 Pfam PF01061 ABC-2 type transporter 22 227 1.4E-24 T 11-11-2016 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 SHALO_RS01180 41ef61b6adc015a20c733c11b0513e67 344 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 10 339 4.3E-156 T 11-11-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 SHALO_RS01180 41ef61b6adc015a20c733c11b0513e67 344 SUPERFAMILY SSF53067 10 151 7.34E-39 T 11-11-2016 SHALO_RS01180 41ef61b6adc015a20c733c11b0513e67 344 Pfam PF06723 MreB/Mbl protein 12 339 3.1E-145 T 11-11-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 SHALO_RS01180 41ef61b6adc015a20c733c11b0513e67 344 Gene3D G3DSA:3.90.640.10 190 262 2.0E-28 T 11-11-2016 SHALO_RS01180 41ef61b6adc015a20c733c11b0513e67 344 SUPERFAMILY SSF53067 153 333 3.53E-47 T 11-11-2016 SHALO_RS01180 41ef61b6adc015a20c733c11b0513e67 344 Gene3D G3DSA:3.30.420.40 11 162 1.5E-46 T 11-11-2016 SHALO_RS01180 41ef61b6adc015a20c733c11b0513e67 344 Gene3D G3DSA:3.30.420.40 266 320 8.4E-30 T 11-11-2016 SHALO_RS01180 41ef61b6adc015a20c733c11b0513e67 344 Gene3D G3DSA:3.30.420.40 163 189 8.4E-30 T 11-11-2016 SHALO_RS01180 41ef61b6adc015a20c733c11b0513e67 344 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 303 329 1.0E-62 T 11-11-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 SHALO_RS01180 41ef61b6adc015a20c733c11b0513e67 344 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 52 70 1.0E-62 T 11-11-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 SHALO_RS01180 41ef61b6adc015a20c733c11b0513e67 344 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 135 154 1.0E-62 T 11-11-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 SHALO_RS01180 41ef61b6adc015a20c733c11b0513e67 344 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 72 95 1.0E-62 T 11-11-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 SHALO_RS01180 41ef61b6adc015a20c733c11b0513e67 344 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 190 210 1.0E-62 T 11-11-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 SHALO_RS05660 291728f5eb77f2bb2672356724077d15 648 SMART SM00955 216 537 9.3E-127 T 11-11-2016 SHALO_RS05660 291728f5eb77f2bb2672356724077d15 648 Pfam PF00773 RNB domain 216 533 6.4E-86 T 11-11-2016 SHALO_RS05660 291728f5eb77f2bb2672356724077d15 648 SUPERFAMILY SSF50249 179 580 4.91E-107 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold SHALO_RS05660 291728f5eb77f2bb2672356724077d15 648 ProSitePatterns PS01175 Ribonuclease II family signature. 504 528 - T 11-11-2016 IPR022966 Ribonuclease II/R, conserved site SHALO_RS00355 3a5a5340ca2a947b73328b5a1e846616 260 TIGRFAM TIGR01714 phage_rep_org_N: phage replisome organizer, putative, N-terminal region 7 122 2.4E-23 T 11-11-2016 IPR010056 Phage replisome organiser, N-terminal domain SHALO_RS00355 3a5a5340ca2a947b73328b5a1e846616 260 Pfam PF09681 N-terminal phage replisome organiser (Phage_rep_org_N) 7 122 3.1E-23 T 11-11-2016 IPR010056 Phage replisome organiser, N-terminal domain SHALO_RS08335 b65764718a02bd96bceec63e469b4219 305 Gene3D G3DSA:1.10.10.10 2 56 2.9E-14 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS08335 b65764718a02bd96bceec63e469b4219 305 PIRSF PIRSF016838 1 304 2.7E-25 T 11-11-2016 IPR028349 Protein PafC SHALO_RS08335 b65764718a02bd96bceec63e469b4219 305 Pfam PF08279 HTH domain 5 56 5.5E-16 T 11-11-2016 IPR013196 Helix-turn-helix, type 11 SHALO_RS08335 b65764718a02bd96bceec63e469b4219 305 Pfam PF13280 WYL domain 131 295 8.2E-35 T 11-11-2016 IPR026881 WYL domain SHALO_RS08335 b65764718a02bd96bceec63e469b4219 305 SUPERFAMILY SSF46785 4 57 7.69E-11 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS00530 90869dbba8eb6c6800cb90b6d1717f86 182 Gene3D G3DSA:3.40.50.1580 17 179 5.0E-14 T 11-11-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SHALO_RS00530 90869dbba8eb6c6800cb90b6d1717f86 182 SUPERFAMILY SSF53167 17 177 1.11E-17 T 11-11-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SHALO_RS14935 dfd8f35a880945696dc0a35b0a6c9c04 183 Gene3D G3DSA:1.10.3480.10 4 182 6.0E-28 T 11-11-2016 IPR020945 DMSO/Nitrate reductase chaperone SHALO_RS14935 dfd8f35a880945696dc0a35b0a6c9c04 183 Pfam PF02613 Nitrate reductase delta subunit 53 149 2.4E-13 T 11-11-2016 IPR020945 DMSO/Nitrate reductase chaperone SHALO_RS14935 dfd8f35a880945696dc0a35b0a6c9c04 183 SUPERFAMILY SSF89155 4 182 3.53E-30 T 11-11-2016 IPR020945 DMSO/Nitrate reductase chaperone SHALO_RS03230 864f0ea42d6edf987cdceb7ed0671591 1048 Pfam PF05140 ResB-like family 346 417 6.1E-12 T 11-11-2016 IPR007816 ResB-like domain SHALO_RS03230 864f0ea42d6edf987cdceb7ed0671591 1048 Pfam PF01578 Cytochrome C assembly protein 803 1010 2.6E-40 T 11-11-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 SHALO_RS15100 94c556c26c52468bb57d216e73ffeccb 186 SUPERFAMILY SSF55194 5 185 9.55E-64 T 11-11-2016 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 SHALO_RS15100 94c556c26c52468bb57d216e73ffeccb 186 Pfam PF01765 Ribosome recycling factor 21 184 4.0E-56 T 11-11-2016 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 SHALO_RS15100 94c556c26c52468bb57d216e73ffeccb 186 Hamap MF_00040 Ribosome-recycling factor [frr]. 4 186 24.603 T 11-11-2016 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 SHALO_RS15100 94c556c26c52468bb57d216e73ffeccb 186 Gene3D G3DSA:1.10.132.20 67 186 3.0E-38 T 11-11-2016 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 SHALO_RS15100 94c556c26c52468bb57d216e73ffeccb 186 TIGRFAM TIGR00496 frr: ribosome recycling factor 11 186 1.2E-70 T 11-11-2016 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 SHALO_RS02845 bb9c55957bc9ab862a3ff3dc6fe923ed 80 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 76 21.675 T 11-11-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 SHALO_RS02845 bb9c55957bc9ab862a3ff3dc6fe923ed 80 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 48 8.9E-23 T 11-11-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 SHALO_RS02845 bb9c55957bc9ab862a3ff3dc6fe923ed 80 Pfam PF02416 mttA/Hcf106 family 5 51 2.9E-21 T 11-11-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 SHALO_RS05570 e6e26e935f8a869710d8153e63dd7e28 428 SUPERFAMILY SSF53383 2 426 7.75E-126 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase SHALO_RS05570 e6e26e935f8a869710d8153e63dd7e28 428 Gene3D G3DSA:3.90.1150.10 4 71 1.5E-38 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SHALO_RS05570 e6e26e935f8a869710d8153e63dd7e28 428 Gene3D G3DSA:3.90.1150.10 321 426 1.5E-38 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SHALO_RS05570 e6e26e935f8a869710d8153e63dd7e28 428 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 235 271 - T 11-11-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SHALO_RS05570 e6e26e935f8a869710d8153e63dd7e28 428 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 5 426 5.9E-189 T 11-11-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 SHALO_RS05570 e6e26e935f8a869710d8153e63dd7e28 428 Gene3D G3DSA:3.40.640.10 73 316 1.4E-80 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SHALO_RS05570 e6e26e935f8a869710d8153e63dd7e28 428 Pfam PF00202 Aminotransferase class-III 34 416 1.8E-79 T 11-11-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SHALO_RS05570 e6e26e935f8a869710d8153e63dd7e28 428 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 5 427 100.992 T 11-11-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 SHALO_RS07160 66f555ae8851a0e1153f6ca751f668b7 290 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 11-11-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 SHALO_RS07160 66f555ae8851a0e1153f6ca751f668b7 290 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 3 288 5.2E-131 T 11-11-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 SHALO_RS07160 66f555ae8851a0e1153f6ca751f668b7 290 Gene3D G3DSA:3.40.50.261 120 287 1.6E-67 T 11-11-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 SHALO_RS07160 66f555ae8851a0e1153f6ca751f668b7 290 SUPERFAMILY SSF52210 123 288 2.22E-50 T 11-11-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 SHALO_RS07160 66f555ae8851a0e1153f6ca751f668b7 290 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 2.7E-32 T 11-11-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 SHALO_RS07160 66f555ae8851a0e1153f6ca751f668b7 290 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 2.7E-32 T 11-11-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 SHALO_RS07160 66f555ae8851a0e1153f6ca751f668b7 290 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 2.7E-32 T 11-11-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 SHALO_RS07160 66f555ae8851a0e1153f6ca751f668b7 290 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 2.7E-32 T 11-11-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 SHALO_RS07160 66f555ae8851a0e1153f6ca751f668b7 290 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 11-11-2016 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site SHALO_RS07160 66f555ae8851a0e1153f6ca751f668b7 290 SUPERFAMILY SSF51735 1 122 1.23E-40 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS07160 66f555ae8851a0e1153f6ca751f668b7 290 Pfam PF02629 CoA binding domain 6 99 3.0E-28 T 11-11-2016 IPR003781 CoA-binding GO:0048037 SHALO_RS07160 66f555ae8851a0e1153f6ca751f668b7 290 Gene3D G3DSA:3.40.50.720 2 119 1.6E-51 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS07160 66f555ae8851a0e1153f6ca751f668b7 290 PIRSF PIRSF001553 1 290 6.5E-128 T 11-11-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 SHALO_RS07160 66f555ae8851a0e1153f6ca751f668b7 290 SMART SM00881 4 100 5.3E-35 T 11-11-2016 IPR003781 CoA-binding GO:0048037 SHALO_RS07160 66f555ae8851a0e1153f6ca751f668b7 290 Pfam PF00549 CoA-ligase 151 270 3.4E-14 T 11-11-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 SHALO_RS05025 5552039060d0a0f5dbd9d98f07b90ce3 688 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 416 607 3.0E-28 T 11-11-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit SHALO_RS05025 5552039060d0a0f5dbd9d98f07b90ce3 688 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 130 396 5.8E-62 T 11-11-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit SHALO_RS05025 5552039060d0a0f5dbd9d98f07b90ce3 688 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 31 687 3.0E-216 T 11-11-2016 IPR011853 TRAP transporter, 4TM/12TM fusion protein SHALO_RS02640 6ad2c83ccabe4deb73bd890b13e9d17c 74 Gene3D G3DSA:2.30.170.10 44 72 7.3E-7 T 11-11-2016 SHALO_RS02640 6ad2c83ccabe4deb73bd890b13e9d17c 74 SUPERFAMILY SSF57868 44 71 2.24E-5 T 11-11-2016 IPR017854 Metallothionein domain GO:0046872 SHALO_RS02640 6ad2c83ccabe4deb73bd890b13e9d17c 74 Pfam PF02069 Prokaryotic metallothionein 44 72 8.5E-7 T 11-11-2016 IPR000518 Metallothionein, family 14, prokaryote GO:0046872 SHALO_RS13300 f62a03d20d975a07f8d8fa1f1c5b6842 245 Gene3D G3DSA:1.10.10.10 125 236 7.8E-33 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS13300 f62a03d20d975a07f8d8fa1f1c5b6842 245 SUPERFAMILY SSF46785 130 234 4.97E-19 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS13300 f62a03d20d975a07f8d8fa1f1c5b6842 245 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 149 208 2.1E-7 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SHALO_RS11790 945a3136f2ac74e4ca680c368ad151b3 226 Gene3D G3DSA:3.40.50.620 6 222 2.3E-75 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHALO_RS11790 945a3136f2ac74e4ca680c368ad151b3 226 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 6 223 48.799 T 11-11-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 SHALO_RS11790 945a3136f2ac74e4ca680c368ad151b3 226 SUPERFAMILY SSF52402 7 222 5.95E-58 T 11-11-2016 SHALO_RS11790 945a3136f2ac74e4ca680c368ad151b3 226 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 8 215 3.7E-75 T 11-11-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 SHALO_RS11790 945a3136f2ac74e4ca680c368ad151b3 226 PIRSF PIRSF006293 4 225 1.6E-73 T 11-11-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 SHALO_RS11790 945a3136f2ac74e4ca680c368ad151b3 226 Pfam PF06508 Queuosine biosynthesis protein QueC 7 222 1.4E-76 T 11-11-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 SHALO_RS14645 92cc9b106002b76acea9e8ea218ca1b1 252 Pfam PF08241 Methyltransferase domain 57 145 6.1E-16 T 11-11-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 SHALO_RS14645 92cc9b106002b76acea9e8ea218ca1b1 252 Gene3D G3DSA:3.40.50.150 38 187 2.8E-25 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS14645 92cc9b106002b76acea9e8ea218ca1b1 252 SUPERFAMILY SSF53335 41 197 4.38E-24 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS07240 e4d06e153f6dfab09a9e5905d41d37fc 180 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 2 176 2.0E-48 T 11-11-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668 SHALO_RS07240 e4d06e153f6dfab09a9e5905d41d37fc 180 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 57 79 - T 11-11-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 SHALO_RS07240 e4d06e153f6dfab09a9e5905d41d37fc 180 Pfam PF01066 CDP-alcohol phosphatidyltransferase 3 79 4.0E-16 T 11-11-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 SHALO_RS07240 e4d06e153f6dfab09a9e5905d41d37fc 180 PIRSF PIRSF000847 1 179 1.7E-47 T 11-11-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668 SHALO_RS07225 99b385d8d8ae0d4d11391b59fedc0597 218 Pfam PF08901 Protein of unknown function (DUF1847) 29 187 2.5E-66 T 11-11-2016 IPR014997 Protein of unknown function DUF1847 SHALO_RS06585 365eb7177ecbe82ca59bdf35bcc5b5ef 372 Gene3D G3DSA:3.40.640.10 36 240 3.1E-49 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SHALO_RS06585 365eb7177ecbe82ca59bdf35bcc5b5ef 372 Pfam PF00155 Aminotransferase class I and II 25 364 9.7E-46 T 11-11-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SHALO_RS06585 365eb7177ecbe82ca59bdf35bcc5b5ef 372 SUPERFAMILY SSF53383 25 369 2.86E-87 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase SHALO_RS06585 365eb7177ecbe82ca59bdf35bcc5b5ef 372 Gene3D G3DSA:3.90.1150.10 241 369 2.1E-34 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SHALO_RS11280 4fb99d31a024fe846c8999a66222f14c 234 Pfam PF13181 Tetratricopeptide repeat 51 81 0.02 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SHALO_RS11280 4fb99d31a024fe846c8999a66222f14c 234 SMART SM00028 110 143 11.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SHALO_RS11280 4fb99d31a024fe846c8999a66222f14c 234 SMART SM00028 48 81 12.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SHALO_RS11280 4fb99d31a024fe846c8999a66222f14c 234 SMART SM00028 144 177 200.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SHALO_RS11280 4fb99d31a024fe846c8999a66222f14c 234 Gene3D G3DSA:1.25.40.10 26 207 7.1E-20 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SHALO_RS11280 4fb99d31a024fe846c8999a66222f14c 234 SUPERFAMILY SSF48452 112 206 8.72E-16 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SHALO_RS11280 4fb99d31a024fe846c8999a66222f14c 234 SUPERFAMILY SSF48452 27 83 8.72E-16 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SHALO_RS01900 364da3ff7f3166aea9172682beb0ffba 408 Gene3D G3DSA:3.20.20.140 61 359 2.1E-53 T 11-11-2016 SHALO_RS01900 364da3ff7f3166aea9172682beb0ffba 408 Gene3D G3DSA:2.30.40.10 362 376 9.3E-6 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SHALO_RS01900 364da3ff7f3166aea9172682beb0ffba 408 Gene3D G3DSA:2.30.40.10 3 60 9.3E-6 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SHALO_RS01900 364da3ff7f3166aea9172682beb0ffba 408 SUPERFAMILY SSF51338 2 72 2.1E-10 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SHALO_RS01900 364da3ff7f3166aea9172682beb0ffba 408 SUPERFAMILY SSF51556 59 359 1.07E-60 T 11-11-2016 IPR032466 Metal-dependent hydrolase SHALO_RS01900 364da3ff7f3166aea9172682beb0ffba 408 Pfam PF01979 Amidohydrolase family 56 405 9.2E-37 T 11-11-2016 IPR006680 Amidohydrolase-related GO:0016787 SHALO_RS11860 b0cbbc838618492584d8d92e95953874 533 Pfam PF00672 HAMP domain 183 250 2.1E-6 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SHALO_RS11860 b0cbbc838618492584d8d92e95953874 533 SMART SM00283 263 531 1.1E-42 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SHALO_RS11860 b0cbbc838618492584d8d92e95953874 533 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 347 530 7.9E-42 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SHALO_RS11860 b0cbbc838618492584d8d92e95953874 533 Gene3D G3DSA:1.10.287.950 286 455 3.4E-42 T 11-11-2016 SHALO_RS11860 b0cbbc838618492584d8d92e95953874 533 SUPERFAMILY SSF58104 223 532 1.48E-55 T 11-11-2016 SHALO_RS00290 013943cda36aab940f3bd14149420a70 631 Pfam PF10592 AIPR protein 267 581 7.4E-64 T 11-11-2016 IPR018891 Abortive bacteriophage infection, resistance SHALO_RS14600 e7af0e0f41542b51986560b40b3cefc2 232 SUPERFAMILY SSF53448 3 225 4.22E-59 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases SHALO_RS14600 e7af0e0f41542b51986560b40b3cefc2 232 Gene3D G3DSA:3.90.550.10 3 224 6.2E-73 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases SHALO_RS14600 e7af0e0f41542b51986560b40b3cefc2 232 Pfam PF02348 Cytidylyltransferase 3 202 1.1E-38 T 11-11-2016 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 SHALO_RS14600 e7af0e0f41542b51986560b40b3cefc2 232 TIGRFAM TIGR03584 PseF: pseudaminic acid cytidylyltransferase 3 223 5.6E-108 T 11-11-2016 IPR020039 Pseudaminic acid cytidylyltransferase KEGG: 00520+2.7.7.81|MetaCyc: PWY-6143 SHALO_RS07305 b46ace3bd300669bca110c4f13359cd7 90 Gene3D G3DSA:3.30.70.100 4 88 3.5E-20 T 11-11-2016 SHALO_RS07305 b46ace3bd300669bca110c4f13359cd7 90 SUPERFAMILY SSF54975 3 89 2.62E-19 T 11-11-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 SHALO_RS07305 b46ace3bd300669bca110c4f13359cd7 90 Pfam PF00708 Acylphosphatase 1 89 3.8E-18 T 11-11-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 SHALO_RS13535 4e8b3f6c915090067c218efa5813a6f1 151 SUPERFAMILY SSF46785 13 149 4.42E-30 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS13535 4e8b3f6c915090067c218efa5813a6f1 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 97 113 5.7E-5 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SHALO_RS13535 4e8b3f6c915090067c218efa5813a6f1 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 127 147 5.7E-5 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SHALO_RS13535 4e8b3f6c915090067c218efa5813a6f1 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 78 93 5.7E-5 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SHALO_RS13535 4e8b3f6c915090067c218efa5813a6f1 151 Gene3D G3DSA:1.10.10.10 12 149 4.4E-34 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS13535 4e8b3f6c915090067c218efa5813a6f1 151 Pfam PF01047 MarR family 44 100 1.4E-11 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SHALO_RS13535 4e8b3f6c915090067c218efa5813a6f1 151 SMART SM00347 37 137 1.2E-21 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SHALO_RS04445 48d49babb9cdf75dac3c07277f05da03 97 Pfam PF02325 YGGT family 16 83 1.4E-18 T 11-11-2016 IPR003425 CCB3/YggT GO:0016020 SHALO_RS09945 f57978a16dc68dfedc0931c32a74be4f 164 Pfam PF13633 Prokaryotic N-terminal methylation site 3 26 1.7E-6 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site SHALO_RS09945 f57978a16dc68dfedc0931c32a74be4f 164 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 2 25 2.4E-8 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site SHALO_RS09945 f57978a16dc68dfedc0931c32a74be4f 164 SUPERFAMILY SSF54523 5 108 2.83E-15 T 11-11-2016 SHALO_RS09945 f57978a16dc68dfedc0931c32a74be4f 164 Gene3D G3DSA:3.30.700.10 5 119 3.2E-10 T 11-11-2016 SHALO_RS13390 19b3ebc08154c88fc7110bff59ef5f63 190 Gene3D G3DSA:1.10.490.10 51 169 9.3E-25 T 11-11-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 SHALO_RS13390 19b3ebc08154c88fc7110bff59ef5f63 190 SUPERFAMILY SSF46458 54 167 2.23E-18 T 11-11-2016 IPR009050 Globin-like SHALO_RS13390 19b3ebc08154c88fc7110bff59ef5f63 190 Pfam PF01152 Bacterial-like globin 55 164 1.9E-17 T 11-11-2016 IPR001486 Truncated hemoglobin GO:0019825 SHALO_RS10970 19982cf1694fb8a1d1770c21815e204f 489 Pfam PF13502 AsmA-like C-terminal region 219 408 2.7E-10 T 11-11-2016 IPR032712 AsmA-like, C-terminal SHALO_RS10970 19982cf1694fb8a1d1770c21815e204f 489 Pfam PF05170 AsmA family 3 178 2.9E-20 T 11-11-2016 IPR007844 AsmA SHALO_RS05865 b056972dff6dd54e127664958850a3a3 204 SUPERFAMILY SSF52833 26 180 7.61E-5 T 11-11-2016 IPR012336 Thioredoxin-like fold SHALO_RS05865 b056972dff6dd54e127664958850a3a3 204 Gene3D G3DSA:1.10.472.60 68 151 1.3E-11 T 11-11-2016 IPR023169 UPF0413, central domain SHALO_RS02880 8b22e4c8b2c0edf682e50e224d1afc18 342 Pfam PF03150 Di-haem cytochrome c peroxidase 56 205 2.6E-41 T 11-11-2016 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 SHALO_RS02880 8b22e4c8b2c0edf682e50e224d1afc18 342 Gene3D G3DSA:1.10.760.10 198 321 3.1E-34 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS02880 8b22e4c8b2c0edf682e50e224d1afc18 342 Gene3D G3DSA:1.10.760.10 49 197 3.0E-43 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS02880 8b22e4c8b2c0edf682e50e224d1afc18 342 PIRSF PIRSF000294 1 340 8.3E-125 T 11-11-2016 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 SHALO_RS02880 8b22e4c8b2c0edf682e50e224d1afc18 342 SUPERFAMILY SSF46626 193 334 2.36E-32 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS02880 8b22e4c8b2c0edf682e50e224d1afc18 342 Pfam PF00034 Cytochrome c 214 307 7.1E-8 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS02880 8b22e4c8b2c0edf682e50e224d1afc18 342 SUPERFAMILY SSF46626 46 194 5.84E-43 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS12735 a8900591e364aa79309ec667b4121216 318 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 280 295 1.1E-5 T 11-11-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SHALO_RS12735 a8900591e364aa79309ec667b4121216 318 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 295 311 1.1E-5 T 11-11-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SHALO_RS12735 a8900591e364aa79309ec667b4121216 318 SUPERFAMILY SSF46689 265 314 4.93E-12 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 SHALO_RS12735 a8900591e364aa79309ec667b4121216 318 Pfam PF12833 Helix-turn-helix domain 237 312 1.7E-19 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SHALO_RS12735 a8900591e364aa79309ec667b4121216 318 Gene3D G3DSA:1.10.10.60 265 313 3.6E-15 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 SHALO_RS12735 a8900591e364aa79309ec667b4121216 318 SMART SM00342 228 311 1.4E-24 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SHALO_RS12735 a8900591e364aa79309ec667b4121216 318 Gene3D G3DSA:1.10.10.60 213 258 4.5E-5 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 SHALO_RS04240 a87d7d9e1f4debc1060319aa837026c6 327 SUPERFAMILY SSF55174 10 59 1.14E-7 T 11-11-2016 SHALO_RS04240 a87d7d9e1f4debc1060319aa837026c6 327 Pfam PF00849 RNA pseudouridylate synthase 83 239 5.0E-26 T 11-11-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 SHALO_RS04240 a87d7d9e1f4debc1060319aa837026c6 327 SUPERFAMILY SSF55120 70 295 7.2E-60 T 11-11-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SHALO_RS04240 a87d7d9e1f4debc1060319aa837026c6 327 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 7 295 5.9E-68 T 11-11-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 SHALO_RS04240 a87d7d9e1f4debc1060319aa837026c6 327 Gene3D G3DSA:3.10.290.10 9 57 1.3E-10 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 SHALO_RS04240 a87d7d9e1f4debc1060319aa837026c6 327 SMART SM00363 9 66 0.001 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 SHALO_RS04240 a87d7d9e1f4debc1060319aa837026c6 327 Pfam PF01479 S4 domain 10 55 8.6E-5 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 SHALO_RS04240 a87d7d9e1f4debc1060319aa837026c6 327 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 129 143 - T 11-11-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 SHALO_RS09635 3fa6cbf2dff88055e4afe2ca65001ae8 536 Pfam PF12729 Four helix bundle sensory module for signal transduction 1 174 2.6E-14 T 11-11-2016 IPR024478 4HB MCP domain SHALO_RS09635 3fa6cbf2dff88055e4afe2ca65001ae8 536 Gene3D G3DSA:1.10.287.950 293 526 1.8E-45 T 11-11-2016 SHALO_RS09635 3fa6cbf2dff88055e4afe2ca65001ae8 536 SMART SM00283 274 535 2.6E-44 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SHALO_RS09635 3fa6cbf2dff88055e4afe2ca65001ae8 536 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 372 399 9.0E-22 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SHALO_RS09635 3fa6cbf2dff88055e4afe2ca65001ae8 536 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 1 26 9.0E-22 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SHALO_RS09635 3fa6cbf2dff88055e4afe2ca65001ae8 536 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 401 430 9.0E-22 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SHALO_RS09635 3fa6cbf2dff88055e4afe2ca65001ae8 536 SUPERFAMILY SSF58104 228 535 8.02E-58 T 11-11-2016 SHALO_RS09635 3fa6cbf2dff88055e4afe2ca65001ae8 536 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 351 534 4.6E-42 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SHALO_RS13035 ef455acba2a6307963b916cab352187d 321 Gene3D G3DSA:3.40.50.1980 133 292 3.6E-31 T 11-11-2016 SHALO_RS13035 ef455acba2a6307963b916cab352187d 321 Gene3D G3DSA:3.40.50.1980 2 128 1.0E-9 T 11-11-2016 SHALO_RS13035 ef455acba2a6307963b916cab352187d 321 Pfam PF01497 Periplasmic binding protein 62 253 3.0E-24 T 11-11-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 SHALO_RS13035 ef455acba2a6307963b916cab352187d 321 SUPERFAMILY SSF53807 3 314 3.65E-54 T 11-11-2016 SHALO_RS07235 7d2164969bbe56bd3b7c038c406588df 352 SUPERFAMILY SSF50156 83 188 6.05E-17 T 11-11-2016 IPR001478 PDZ domain GO:0005515 SHALO_RS07235 7d2164969bbe56bd3b7c038c406588df 352 SMART SM00228 115 179 5.6E-8 T 11-11-2016 IPR001478 PDZ domain GO:0005515 SHALO_RS07235 7d2164969bbe56bd3b7c038c406588df 352 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 125 176 2.2E-7 T 11-11-2016 IPR001478 PDZ domain GO:0005515 SHALO_RS07235 7d2164969bbe56bd3b7c038c406588df 352 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 123 349 3.8E-51 T 11-11-2016 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 SHALO_RS07235 7d2164969bbe56bd3b7c038c406588df 352 Pfam PF02163 Peptidase family M50 7 336 6.5E-75 T 11-11-2016 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033 SHALO_RS07235 7d2164969bbe56bd3b7c038c406588df 352 Gene3D G3DSA:2.30.42.10 89 189 4.9E-22 T 11-11-2016 IPR001478 PDZ domain GO:0005515 SHALO_RS07000 3e5550b2674e1069eeb7119f5b924f7f 196 Pfam PF02525 Flavodoxin-like fold 2 183 4.4E-32 T 11-11-2016 IPR003680 Flavodoxin-like fold SHALO_RS07000 3e5550b2674e1069eeb7119f5b924f7f 196 Gene3D G3DSA:3.40.50.360 1 195 2.3E-37 T 11-11-2016 IPR029039 Flavoprotein-like domain SHALO_RS07000 3e5550b2674e1069eeb7119f5b924f7f 196 SUPERFAMILY SSF52218 1 195 2.46E-35 T 11-11-2016 IPR029039 Flavoprotein-like domain SHALO_RS06775 23255ca2c4a8c35a9092e4c1092849e4 410 SUPERFAMILY SSF102114 31 272 1.24E-14 T 11-11-2016 SHALO_RS06775 23255ca2c4a8c35a9092e4c1092849e4 410 TIGRFAM TIGR03916 rSAM_link_UDG: putative DNA modification/repair radical SAM protein 6 394 1.4E-164 T 11-11-2016 IPR023874 DNA modification/repair radical SAM protein, putative SHALO_RS06775 23255ca2c4a8c35a9092e4c1092849e4 410 Gene3D G3DSA:3.20.20.70 51 235 6.9E-9 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_RS06775 23255ca2c4a8c35a9092e4c1092849e4 410 SUPERFAMILY SSF47781 293 368 1.89E-10 T 11-11-2016 IPR010994 RuvA domain 2-like SHALO_RS02520 7e1cac343c3e68c987c3ec439063f9f0 530 Gene3D G3DSA:3.90.76.10 55 187 5.6E-18 T 11-11-2016 SHALO_RS02520 7e1cac343c3e68c987c3ec439063f9f0 530 SUPERFAMILY SSF53850 40 501 2.53E-46 T 11-11-2016 SHALO_RS02520 7e1cac343c3e68c987c3ec439063f9f0 530 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 91 324 7.8E-34 T 11-11-2016 IPR000914 Solute-binding protein family 5 domain SHALO_RS02520 7e1cac343c3e68c987c3ec439063f9f0 530 Gene3D G3DSA:3.40.190.10 188 315 3.1E-14 T 11-11-2016 SHALO_RS01435 f342d848589ffb0e6a5fd9d77992c76f 330 SUPERFAMILY SSF142754 6 330 1.44E-93 T 11-11-2016 SHALO_RS01435 f342d848589ffb0e6a5fd9d77992c76f 330 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 4 330 7.0E-102 T 11-11-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 SHALO_RS01435 f342d848589ffb0e6a5fd9d77992c76f 330 Pfam PF02445 Quinolinate synthetase A protein 8 329 4.4E-97 T 11-11-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 SHALO_RS07015 9c25aebe594d13420a7cbd122e5f2e33 415 Pfam PF13194 Domain of unknown function (DUF4010) 180 388 2.9E-62 T 11-11-2016 IPR025105 Domain of unknown function DUF4010 SHALO_RS07015 9c25aebe594d13420a7cbd122e5f2e33 415 Pfam PF02308 MgtC family 9 131 8.3E-20 T 11-11-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 SHALO_RS12875 32674d142b2600454a6392978dc9c3df 224 Gene3D G3DSA:3.40.50.2300 1 122 2.0E-37 T 11-11-2016 SHALO_RS12875 32674d142b2600454a6392978dc9c3df 224 SMART SM00862 144 219 8.1E-14 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS12875 32674d142b2600454a6392978dc9c3df 224 Gene3D G3DSA:1.10.10.10 123 220 2.3E-24 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS12875 32674d142b2600454a6392978dc9c3df 224 Pfam PF00072 Response regulator receiver domain 3 112 9.5E-28 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS12875 32674d142b2600454a6392978dc9c3df 224 SUPERFAMILY SSF52172 1 178 6.55E-37 T 11-11-2016 IPR011006 CheY-like superfamily SHALO_RS12875 32674d142b2600454a6392978dc9c3df 224 SMART SM00448 1 112 8.2E-40 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS12875 32674d142b2600454a6392978dc9c3df 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 218 4.7E-18 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS08515 8cec9258c4e8e6468c8b259c072325a3 290 Gene3D G3DSA:3.40.50.1100 122 285 2.8E-4 T 11-11-2016 SHALO_RS08515 8cec9258c4e8e6468c8b259c072325a3 290 SUPERFAMILY SSF53686 13 284 3.05E-36 T 11-11-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SHALO_RS08515 8cec9258c4e8e6468c8b259c072325a3 290 Gene3D G3DSA:3.40.50.1100 33 107 1.1E-4 T 11-11-2016 SHALO_RS04215 be6c27c4867134b0dd5ff3b790caa2b8 479 PIRSF PIRSF006247 1 478 9.8E-141 T 11-11-2016 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 SHALO_RS04215 be6c27c4867134b0dd5ff3b790caa2b8 479 Pfam PF02386 Cation transport protein 292 471 1.3E-26 T 11-11-2016 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 SHALO_RS04215 be6c27c4867134b0dd5ff3b790caa2b8 479 Pfam PF02386 Cation transport protein 50 256 2.7E-27 T 11-11-2016 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 SHALO_RS08280 a2b08c1bfcfd3d680e78407c34b9669a 348 Gene3D G3DSA:3.40.50.1970 28 164 4.3E-59 T 11-11-2016 SHALO_RS08280 a2b08c1bfcfd3d680e78407c34b9669a 348 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 4 345 39.543 T 11-11-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 SHALO_RS08280 a2b08c1bfcfd3d680e78407c34b9669a 348 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 24 342 1.5E-113 T 11-11-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 SHALO_RS08280 a2b08c1bfcfd3d680e78407c34b9669a 348 PIRSF PIRSF001455 4 348 2.9E-104 T 11-11-2016 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 SHALO_RS08280 a2b08c1bfcfd3d680e78407c34b9669a 348 Pfam PF01761 3-dehydroquinate synthase 59 312 1.3E-103 T 11-11-2016 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 SHALO_RS08280 a2b08c1bfcfd3d680e78407c34b9669a 348 SUPERFAMILY SSF56796 28 344 8.64E-106 T 11-11-2016 SHALO_RS08280 a2b08c1bfcfd3d680e78407c34b9669a 348 Gene3D G3DSA:1.20.1090.10 165 344 9.4E-60 T 11-11-2016 SHALO_RS02750 19f6e1dd51bd8c343ab7a67696961344 260 Gene3D G3DSA:1.20.950.10 3 251 9.6E-98 T 11-11-2016 SHALO_RS02750 19f6e1dd51bd8c343ab7a67696961344 260 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 105 217 6.8E-15 T 11-11-2016 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 SHALO_RS02750 19f6e1dd51bd8c343ab7a67696961344 260 SUPERFAMILY SSF81343 3 244 5.4E-78 T 11-11-2016 SHALO_RS02750 19f6e1dd51bd8c343ab7a67696961344 260 PIRSF PIRSF000177 1 255 1.2E-113 T 11-11-2016 IPR004224 Fumarate reductase respiratory complex, transmembrane subunit GO:0006099 SHALO_RS10035 a7cda756635f9001eb8412d09d0ccdd3 514 Pfam PF00990 Diguanylate cyclase, GGDEF domain 355 509 1.4E-38 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS10035 a7cda756635f9001eb8412d09d0ccdd3 514 Gene3D G3DSA:3.30.70.270 356 511 6.2E-46 T 11-11-2016 SHALO_RS10035 a7cda756635f9001eb8412d09d0ccdd3 514 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 354 511 4.7E-45 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS10035 a7cda756635f9001eb8412d09d0ccdd3 514 SMART SM00267 342 513 5.8E-42 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS10035 a7cda756635f9001eb8412d09d0ccdd3 514 SUPERFAMILY SSF55073 358 511 2.67E-43 T 11-11-2016 IPR029787 Nucleotide cyclase SHALO_RS11935 0c0cc8bc7a7756df3420558755b28f3b 130 SUPERFAMILY SSF54211 4 130 8.72E-41 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SHALO_RS11935 0c0cc8bc7a7756df3420558755b28f3b 130 Gene3D G3DSA:3.30.230.10 3 130 3.1E-45 T 11-11-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SHALO_RS11935 0c0cc8bc7a7756df3420558755b28f3b 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 11-11-2016 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 SHALO_RS11935 0c0cc8bc7a7756df3420558755b28f3b 130 Pfam PF00380 Ribosomal protein S9/S16 8 130 3.8E-42 T 11-11-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 SHALO_RS11935 0c0cc8bc7a7756df3420558755b28f3b 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 29.321 T 11-11-2016 IPR023035 Ribosomal protein S9, bacterial/plastid SHALO_RS08770 9febcf4692cd700707a800216b920c22 171 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 20 96 2.4E-9 T 11-11-2016 IPR004564 Outer membrane lipoprotein carrier protein LolA-like SHALO_RS08770 9febcf4692cd700707a800216b920c22 171 SUPERFAMILY SSF89392 14 170 1.92E-25 T 11-11-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX SHALO_RS08770 9febcf4692cd700707a800216b920c22 171 Gene3D G3DSA:2.50.20.10 16 170 5.3E-21 T 11-11-2016 SHALO_RS04470 1ebd66711ca6e94038c5177e6ec14efe 237 Pfam PF00072 Response regulator receiver domain 21 130 2.3E-23 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS04470 1ebd66711ca6e94038c5177e6ec14efe 237 SMART SM00862 163 234 2.8E-13 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS04470 1ebd66711ca6e94038c5177e6ec14efe 237 Pfam PF00486 Transcriptional regulatory protein, C terminal 168 234 9.0E-13 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS04470 1ebd66711ca6e94038c5177e6ec14efe 237 Gene3D G3DSA:1.10.10.10 168 234 1.1E-15 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS04470 1ebd66711ca6e94038c5177e6ec14efe 237 SUPERFAMILY SSF46894 157 234 8.33E-12 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SHALO_RS04470 1ebd66711ca6e94038c5177e6ec14efe 237 SMART SM00448 19 130 2.0E-25 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS04470 1ebd66711ca6e94038c5177e6ec14efe 237 Gene3D G3DSA:3.40.50.2300 17 167 5.6E-30 T 11-11-2016 SHALO_RS04470 1ebd66711ca6e94038c5177e6ec14efe 237 SUPERFAMILY SSF52172 17 180 1.99E-32 T 11-11-2016 IPR011006 CheY-like superfamily SHALO_RS14750 37917869e1da5668526536ab652d09eb 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 38 53 2.2E-20 T 11-11-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 SHALO_RS14750 37917869e1da5668526536ab652d09eb 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 53 75 2.2E-20 T 11-11-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 SHALO_RS14750 37917869e1da5668526536ab652d09eb 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 17 38 2.2E-20 T 11-11-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 SHALO_RS14750 37917869e1da5668526536ab652d09eb 88 Pfam PF01313 Bacterial export proteins, family 3 5 76 1.4E-27 T 11-11-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 SHALO_RS14750 37917869e1da5668526536ab652d09eb 88 PIRSF PIRSF004669 1 88 1.8E-28 T 11-11-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 SHALO_RS14750 37917869e1da5668526536ab652d09eb 88 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 3 86 3.8E-29 T 11-11-2016 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 SHALO_RS11200 6872186c7ab913f45692994d802fe4e7 272 Gene3D G3DSA:2.40.50.140 174 271 3.0E-36 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold SHALO_RS11200 6872186c7ab913f45692994d802fe4e7 272 Gene3D G3DSA:3.30.1490.70 32 43 1.6E-9 T 11-11-2016 SHALO_RS11200 6872186c7ab913f45692994d802fe4e7 272 Gene3D G3DSA:3.30.1490.70 143 173 1.6E-9 T 11-11-2016 SHALO_RS11200 6872186c7ab913f45692994d802fe4e7 272 Pfam PF14743 DNA ligase OB-like domain 204 268 4.7E-26 T 11-11-2016 IPR029319 DNA ligase, OB-like domain SHALO_RS11200 6872186c7ab913f45692994d802fe4e7 272 SUPERFAMILY SSF56091 30 190 2.47E-35 T 11-11-2016 SHALO_RS11200 6872186c7ab913f45692994d802fe4e7 272 SUPERFAMILY SSF50249 165 269 2.4E-28 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold SHALO_RS11200 6872186c7ab913f45692994d802fe4e7 272 Pfam PF01068 ATP dependent DNA ligase domain 37 190 2.3E-9 T 11-11-2016 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 SHALO_RS09615 baf120157b09d346aa9152aa2d802b1e 270 PRINTS PR00502 NUDIX hydrolase family signature 186 201 6.6E-5 T 11-11-2016 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 SHALO_RS09615 baf120157b09d346aa9152aa2d802b1e 270 PRINTS PR00502 NUDIX hydrolase family signature 172 186 6.6E-5 T 11-11-2016 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 SHALO_RS09615 baf120157b09d346aa9152aa2d802b1e 270 Gene3D G3DSA:3.90.79.10 109 268 3.0E-43 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SHALO_RS09615 baf120157b09d346aa9152aa2d802b1e 270 ProSitePatterns PS00893 Nudix box signature. 177 198 - T 11-11-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 SHALO_RS09615 baf120157b09d346aa9152aa2d802b1e 270 SUPERFAMILY SSF55811 16 113 1.38E-5 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SHALO_RS09615 baf120157b09d346aa9152aa2d802b1e 270 Pfam PF00293 NUDIX domain 148 254 2.1E-20 T 11-11-2016 IPR000086 NUDIX hydrolase domain GO:0016787 SHALO_RS09615 baf120157b09d346aa9152aa2d802b1e 270 SUPERFAMILY SSF55811 97 259 3.11E-41 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SHALO_RS05810 ef1b83aca0b0080019c0598e2f86fdd4 716 Gene3D G3DSA:2.130.10.10 79 301 9.6E-16 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 SHALO_RS05810 ef1b83aca0b0080019c0598e2f86fdd4 716 SUPERFAMILY SSF50978 73 302 4.58E-19 T 11-11-2016 IPR017986 WD40-repeat-containing domain GO:0005515 SHALO_RS09315 db743933f096eaa4cce2f4456fc921aa 68 Gene3D G3DSA:2.10.110.10 11 51 1.9E-4 T 11-11-2016 IPR001781 Zinc finger, LIM-type GO:0008270 SHALO_RS10770 e7ae4ea2ce5a3cc319596c65e8ba4f87 405 Pfam PF00990 Diguanylate cyclase, GGDEF domain 236 400 1.3E-30 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS10770 e7ae4ea2ce5a3cc319596c65e8ba4f87 405 SUPERFAMILY SSF55073 241 403 1.1E-33 T 11-11-2016 IPR029787 Nucleotide cyclase SHALO_RS10770 e7ae4ea2ce5a3cc319596c65e8ba4f87 405 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 234 402 6.1E-34 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS10770 e7ae4ea2ce5a3cc319596c65e8ba4f87 405 SMART SM00267 226 405 2.6E-33 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS10770 e7ae4ea2ce5a3cc319596c65e8ba4f87 405 Gene3D G3DSA:3.30.70.270 238 403 6.4E-39 T 11-11-2016 SHALO_RS01380 1c7e071caa16c98ea676eaf03d6b422a 50 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 49 14.247 T 11-11-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS01380 1c7e071caa16c98ea676eaf03d6b422a 50 Pfam PF01783 Ribosomal L32p protein family 2 50 5.9E-12 T 11-11-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS01380 1c7e071caa16c98ea676eaf03d6b422a 50 SUPERFAMILY SSF57829 1 50 4.58E-12 T 11-11-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 SHALO_RS01380 1c7e071caa16c98ea676eaf03d6b422a 50 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 50 1.1E-16 T 11-11-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS12925 6b7e42c381cde310e8b0bc181650ab22 440 SUPERFAMILY SSF58104 114 317 1.83E-49 T 11-11-2016 SHALO_RS12925 6b7e42c381cde310e8b0bc181650ab22 440 SMART SM00283 99 315 6.1E-26 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SHALO_RS12925 6b7e42c381cde310e8b0bc181650ab22 440 Pfam PF13682 Chemoreceptor zinc-binding domain 316 380 6.7E-14 T 11-11-2016 IPR025991 Chemoreceptor zinc-binding domain SHALO_RS12925 6b7e42c381cde310e8b0bc181650ab22 440 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 165 316 9.0E-38 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SHALO_RS12925 6b7e42c381cde310e8b0bc181650ab22 440 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 197 224 2.0E-21 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SHALO_RS12925 6b7e42c381cde310e8b0bc181650ab22 440 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 226 255 2.0E-21 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SHALO_RS12925 6b7e42c381cde310e8b0bc181650ab22 440 Gene3D G3DSA:1.10.287.950 119 321 3.8E-47 T 11-11-2016 SHALO_RS04580 072223a970d98680f296bc2b732af696 188 Pfam PF06821 Serine hydrolase 4 182 8.6E-28 T 11-11-2016 IPR010662 Putative hydrolase RBBP9/YdeN GO:0016787 SHALO_RS04580 072223a970d98680f296bc2b732af696 188 Gene3D G3DSA:3.40.50.1820 1 186 1.5E-51 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold SHALO_RS04580 072223a970d98680f296bc2b732af696 188 SUPERFAMILY SSF53474 1 184 1.84E-32 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold SHALO_RS14595 5feb0b5cfac699b2dfc8310d9949c0d7 373 Gene3D G3DSA:3.40.640.10 1 241 3.8E-80 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SHALO_RS14595 5feb0b5cfac699b2dfc8310d9949c0d7 373 Gene3D G3DSA:3.90.1150.10 242 365 2.8E-27 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SHALO_RS14595 5feb0b5cfac699b2dfc8310d9949c0d7 373 SUPERFAMILY SSF53383 2 367 8.57E-111 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase SHALO_RS14595 5feb0b5cfac699b2dfc8310d9949c0d7 373 TIGRFAM TIGR03588 PseC: UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase 1 363 1.0E-146 T 11-11-2016 IPR020026 UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase SHALO_RS14595 5feb0b5cfac699b2dfc8310d9949c0d7 373 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 9 360 4.3E-112 T 11-11-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase SHALO_RS14595 5feb0b5cfac699b2dfc8310d9949c0d7 373 PIRSF PIRSF000390 1 369 1.6E-107 T 11-11-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase SHALO_RS07320 713e3290780bad3ad384aa841def070c 402 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 206 223 - T 11-11-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 SHALO_RS07320 713e3290780bad3ad384aa841def070c 402 PIRSF PIRSF000722 1 402 3.2E-156 T 11-11-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 SHALO_RS07320 713e3290780bad3ad384aa841def070c 402 TIGRFAM TIGR00016 ackA: acetate kinase 2 398 9.5E-153 T 11-11-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 SHALO_RS07320 713e3290780bad3ad384aa841def070c 402 Hamap MF_00020 Acetate kinase [ackA]. 1 401 177.602 T 11-11-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 SHALO_RS07320 713e3290780bad3ad384aa841def070c 402 SUPERFAMILY SSF53067 160 398 3.09E-91 T 11-11-2016 SHALO_RS07320 713e3290780bad3ad384aa841def070c 402 Pfam PF00871 Acetokinase family 2 391 1.6E-151 T 11-11-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 SHALO_RS07320 713e3290780bad3ad384aa841def070c 402 SUPERFAMILY SSF53067 2 198 6.47E-65 T 11-11-2016 SHALO_RS07320 713e3290780bad3ad384aa841def070c 402 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 3 14 - T 11-11-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 SHALO_RS07320 713e3290780bad3ad384aa841def070c 402 Gene3D G3DSA:3.30.420.40 208 397 3.5E-81 T 11-11-2016 SHALO_RS07320 713e3290780bad3ad384aa841def070c 402 PRINTS PR00471 Acetate kinase family signature 3 14 3.1E-46 T 11-11-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 SHALO_RS07320 713e3290780bad3ad384aa841def070c 402 PRINTS PR00471 Acetate kinase family signature 206 227 3.1E-46 T 11-11-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 SHALO_RS07320 713e3290780bad3ad384aa841def070c 402 PRINTS PR00471 Acetate kinase family signature 176 189 3.1E-46 T 11-11-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 SHALO_RS07320 713e3290780bad3ad384aa841def070c 402 PRINTS PR00471 Acetate kinase family signature 324 340 3.1E-46 T 11-11-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 SHALO_RS07320 713e3290780bad3ad384aa841def070c 402 PRINTS PR00471 Acetate kinase family signature 379 391 3.1E-46 T 11-11-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 SHALO_RS07320 713e3290780bad3ad384aa841def070c 402 PRINTS PR00471 Acetate kinase family signature 302 315 3.1E-46 T 11-11-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 SHALO_RS07320 713e3290780bad3ad384aa841def070c 402 Gene3D G3DSA:3.30.420.40 2 207 4.6E-10 T 11-11-2016 SHALO_RS00665 7282f1b48286047b4eb3a55a5de29f6e 70 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 43 1.0E-7 T 11-11-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS00665 7282f1b48286047b4eb3a55a5de29f6e 70 Pfam PF01165 Ribosomal protein S21 4 56 2.1E-15 T 11-11-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS00665 7282f1b48286047b4eb3a55a5de29f6e 70 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 17.668 T 11-11-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS00665 7282f1b48286047b4eb3a55a5de29f6e 70 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 3.2E-19 T 11-11-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS00665 7282f1b48286047b4eb3a55a5de29f6e 70 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 3.6E-8 T 11-11-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS00665 7282f1b48286047b4eb3a55a5de29f6e 70 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 3.6E-8 T 11-11-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS00665 7282f1b48286047b4eb3a55a5de29f6e 70 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 3.6E-8 T 11-11-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS00665 7282f1b48286047b4eb3a55a5de29f6e 70 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 3.6E-8 T 11-11-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS09550 3ab2c41db154d4d00cd68be43429394a 374 SUPERFAMILY SSF81301 14 145 7.19E-23 T 11-11-2016 SHALO_RS09550 3ab2c41db154d4d00cd68be43429394a 374 Pfam PF01743 Poly A polymerase head domain 29 148 4.9E-15 T 11-11-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 SHALO_RS09550 3ab2c41db154d4d00cd68be43429394a 374 SUPERFAMILY SSF81891 152 290 2.49E-21 T 11-11-2016 SHALO_RS09550 3ab2c41db154d4d00cd68be43429394a 374 Gene3D G3DSA:1.10.3090.10 149 284 7.4E-18 T 11-11-2016 SHALO_RS09550 3ab2c41db154d4d00cd68be43429394a 374 Gene3D G3DSA:3.30.460.10 12 148 1.3E-24 T 11-11-2016 SHALO_RS06230 877e79d943ff23be21456fd20780602d 209 SUPERFAMILY SSF55729 5 183 7.26E-19 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase SHALO_RS06230 877e79d943ff23be21456fd20780602d 209 Pfam PF00583 Acetyltransferase (GNAT) family 66 181 2.2E-9 T 11-11-2016 IPR000182 GNAT domain GO:0008080 SHALO_RS06230 877e79d943ff23be21456fd20780602d 209 Gene3D G3DSA:3.40.630.30 3 81 1.6E-18 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase SHALO_RS06230 877e79d943ff23be21456fd20780602d 209 Gene3D G3DSA:3.40.630.30 113 189 1.6E-18 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase SHALO_RS03970 f3668b479caa0ea656be256fb424501c 214 Pfam PF00486 Transcriptional regulatory protein, C terminal 144 212 4.1E-13 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS03970 f3668b479caa0ea656be256fb424501c 214 SMART SM00862 142 212 6.6E-11 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS03970 f3668b479caa0ea656be256fb424501c 214 SUPERFAMILY SSF46894 129 212 6.24E-14 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SHALO_RS03970 f3668b479caa0ea656be256fb424501c 214 Gene3D G3DSA:1.10.10.10 130 213 1.2E-13 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS03970 f3668b479caa0ea656be256fb424501c 214 SMART SM00448 1 111 6.6E-28 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS03970 f3668b479caa0ea656be256fb424501c 214 Pfam PF00072 Response regulator receiver domain 3 111 6.7E-22 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS03970 f3668b479caa0ea656be256fb424501c 214 Gene3D G3DSA:3.40.50.2300 1 116 6.3E-30 T 11-11-2016 SHALO_RS03970 f3668b479caa0ea656be256fb424501c 214 SUPERFAMILY SSF52172 1 119 2.42E-28 T 11-11-2016 IPR011006 CheY-like superfamily SHALO_RS04910 18526b78dbaac801b55830bf238a094b 399 Gene3D G3DSA:2.40.160.10 32 399 1.1E-44 T 11-11-2016 IPR023614 Porin domain SHALO_RS04910 18526b78dbaac801b55830bf238a094b 399 Pfam PF03573 outer membrane porin, OprD family 114 398 5.8E-10 T 11-11-2016 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 SHALO_RS04910 18526b78dbaac801b55830bf238a094b 399 SUPERFAMILY SSF56935 70 159 1.56E-7 T 11-11-2016 SHALO_RS04910 18526b78dbaac801b55830bf238a094b 399 SUPERFAMILY SSF56935 196 399 1.56E-7 T 11-11-2016 SHALO_RS07670 7a4f9a50a3ecb219081f251fdc431477 234 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 3 207 1.7E-44 T 11-11-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 SHALO_RS07670 7a4f9a50a3ecb219081f251fdc431477 234 SUPERFAMILY SSF53790 3 228 1.44E-41 T 11-11-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 SHALO_RS07670 7a4f9a50a3ecb219081f251fdc431477 234 PIRSF PIRSF036427 1 232 3.5E-70 T 11-11-2016 IPR012382 Precorrin-2 C(20)-methyltransferase GO:0008757|GO:0009236|GO:0030788 SHALO_RS07670 7a4f9a50a3ecb219081f251fdc431477 234 TIGRFAM TIGR01467 cobI_cbiL: precorrin-2 C(20)-methyltransferase 3 228 3.7E-66 T 11-11-2016 IPR006364 Precorrin-2 C(20)-methyltransferase domain GO:0008757|GO:0009236 SHALO_RS07670 7a4f9a50a3ecb219081f251fdc431477 234 Gene3D G3DSA:3.40.1010.10 2 126 1.6E-29 T 11-11-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 SHALO_RS02630 b864cd8ff3475c466b9c23273c6abc52 417 Gene3D G3DSA:3.30.70.270 255 408 9.0E-17 T 11-11-2016 SHALO_RS02630 b864cd8ff3475c466b9c23273c6abc52 417 SUPERFAMILY SSF55073 260 406 2.9E-16 T 11-11-2016 IPR029787 Nucleotide cyclase SHALO_RS02630 b864cd8ff3475c466b9c23273c6abc52 417 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 252 408 3.3E-11 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS02630 b864cd8ff3475c466b9c23273c6abc52 417 Pfam PF00990 Diguanylate cyclase, GGDEF domain 253 404 2.7E-13 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS02630 b864cd8ff3475c466b9c23273c6abc52 417 SMART SM00267 239 409 6.6E-7 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS09295 683c2a202e578c66e6a4a0b1a2bae828 433 Gene3D G3DSA:3.40.50.980 95 245 1.7E-10 T 11-11-2016 SHALO_RS09295 683c2a202e578c66e6a4a0b1a2bae828 433 SUPERFAMILY SSF56801 46 398 1.11E-32 T 11-11-2016 SHALO_RS09295 683c2a202e578c66e6a4a0b1a2bae828 433 Pfam PF00501 AMP-binding enzyme 78 289 1.8E-11 T 11-11-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 SHALO_RS12755 8bf4585bbdfe299f550b19783ec849a1 103 Pfam PF10087 Uncharacterized protein conserved in bacteria (DUF2325) 4 91 1.7E-16 T 11-11-2016 IPR016772 Uncharacterised conserved protein UCP020408 SHALO_RS12755 8bf4585bbdfe299f550b19783ec849a1 103 PIRSF PIRSF020408 2 100 6.7E-32 T 11-11-2016 IPR016772 Uncharacterised conserved protein UCP020408 SHALO_RS07035 06667797bfa6f7478b63ea113fcde035 178 SUPERFAMILY SSF46689 2 63 1.39E-12 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 SHALO_RS07035 06667797bfa6f7478b63ea113fcde035 178 Pfam PF00440 Bacterial regulatory proteins, tetR family 1 41 2.6E-13 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SHALO_RS07035 06667797bfa6f7478b63ea113fcde035 178 Gene3D G3DSA:1.10.357.10 2 168 1.3E-26 T 11-11-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SHALO_RS11145 479f60cf7c94442ef8147e876c0c5bcc 333 SUPERFAMILY SSF51735 14 331 9.61E-56 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS11145 479f60cf7c94442ef8147e876c0c5bcc 333 Gene3D G3DSA:3.90.25.10 195 331 1.1E-17 T 11-11-2016 SHALO_RS11145 479f60cf7c94442ef8147e876c0c5bcc 333 Gene3D G3DSA:3.40.50.720 13 194 4.3E-31 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS11145 479f60cf7c94442ef8147e876c0c5bcc 333 Pfam PF01370 NAD dependent epimerase/dehydratase family 20 262 9.8E-31 T 11-11-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 SHALO_RS07425 4f1b2896b1783afb0473f0decd397642 240 SMART SM00382 28 212 3.0E-9 T 11-11-2016 IPR003593 AAA+ ATPase domain SHALO_RS07425 4f1b2896b1783afb0473f0decd397642 240 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 3 240 5.7E-104 T 11-11-2016 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 SHALO_RS07425 4f1b2896b1783afb0473f0decd397642 240 Pfam PF00005 ABC transporter 20 165 8.8E-35 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_RS07425 4f1b2896b1783afb0473f0decd397642 240 SUPERFAMILY SSF52540 3 235 2.59E-67 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS07425 4f1b2896b1783afb0473f0decd397642 240 Gene3D G3DSA:3.40.50.300 3 231 5.3E-70 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS08245 5e07a1ecdc550cdddc3ff504ce64ebd0 386 Pfam PF07690 Major Facilitator Superfamily 24 344 3.2E-9 T 11-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SHALO_RS08245 5e07a1ecdc550cdddc3ff504ce64ebd0 386 Gene3D G3DSA:1.20.1250.20 202 379 5.7E-21 T 11-11-2016 SHALO_RS08245 5e07a1ecdc550cdddc3ff504ce64ebd0 386 Gene3D G3DSA:1.20.1250.20 14 196 9.2E-9 T 11-11-2016 SHALO_RS08245 5e07a1ecdc550cdddc3ff504ce64ebd0 386 SUPERFAMILY SSF103473 14 381 2.88E-31 T 11-11-2016 IPR020846 Major facilitator superfamily domain SHALO_RS01685 c063fc99c3d3534c2f03eb64db609aaa 97 Pfam PF00255 Glutathione peroxidase 1 49 4.3E-19 T 11-11-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 SHALO_RS01685 c063fc99c3d3534c2f03eb64db609aaa 97 Gene3D G3DSA:3.40.30.10 1 94 7.6E-42 T 11-11-2016 IPR012336 Thioredoxin-like fold SHALO_RS01685 c063fc99c3d3534c2f03eb64db609aaa 97 SUPERFAMILY SSF52833 1 95 6.36E-35 T 11-11-2016 IPR012336 Thioredoxin-like fold SHALO_RS02465 27bd7278322b487fa3e48827d76290da 212 SUPERFAMILY SSF161098 3 196 7.98E-46 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHALO_RS02465 27bd7278322b487fa3e48827d76290da 212 Gene3D G3DSA:1.10.3720.10 4 210 2.6E-41 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHALO_RS02465 27bd7278322b487fa3e48827d76290da 212 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 26 210 5.5E-23 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHALO_RS12920 0f956341297edb96224b924f8ce63dae 122 Gene3D G3DSA:3.40.50.2300 2 119 2.5E-31 T 11-11-2016 SHALO_RS12920 0f956341297edb96224b924f8ce63dae 122 SUPERFAMILY SSF52172 4 120 5.83E-30 T 11-11-2016 IPR011006 CheY-like superfamily SHALO_RS12920 0f956341297edb96224b924f8ce63dae 122 Pfam PF00072 Response regulator receiver domain 7 115 6.5E-26 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS12920 0f956341297edb96224b924f8ce63dae 122 SMART SM00448 5 117 1.3E-27 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS06645 e852d44477567da501c55352da999506 274 Gene3D G3DSA:3.30.1330.10 13 123 5.8E-26 T 11-11-2016 IPR016188 PurM-like, N-terminal domain SHALO_RS06645 e852d44477567da501c55352da999506 274 Pfam PF00586 AIR synthase related protein, N-terminal domain 18 122 6.5E-15 T 11-11-2016 IPR016188 PurM-like, N-terminal domain SHALO_RS06645 e852d44477567da501c55352da999506 274 SUPERFAMILY SSF56042 128 263 5.58E-16 T 11-11-2016 IPR010918 AIR synthase-related protein, C-terminal domain SHALO_RS06645 e852d44477567da501c55352da999506 274 Gene3D G3DSA:3.90.650.10 131 263 2.4E-21 T 11-11-2016 IPR010918 AIR synthase-related protein, C-terminal domain SHALO_RS06645 e852d44477567da501c55352da999506 274 SUPERFAMILY SSF55326 12 122 1.31E-23 T 11-11-2016 SHALO_RS01725 b9ca2097bf8477e37195c80536ffd5a5 245 SMART SM00382 28 200 1.5E-14 T 11-11-2016 IPR003593 AAA+ ATPase domain SHALO_RS01725 b9ca2097bf8477e37195c80536ffd5a5 245 ProSitePatterns PS00211 ABC transporters family signature. 124 138 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHALO_RS01725 b9ca2097bf8477e37195c80536ffd5a5 245 Pfam PF00005 ABC transporter 19 151 1.8E-24 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_RS01725 b9ca2097bf8477e37195c80536ffd5a5 245 SUPERFAMILY SSF52540 4 211 1.54E-50 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS01725 b9ca2097bf8477e37195c80536ffd5a5 245 Gene3D G3DSA:3.40.50.300 3 218 2.5E-57 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS04290 cee9c51c8d821822c05da307d5dee23e 365 Gene3D G3DSA:3.20.20.70 330 356 7.4E-51 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_RS04290 cee9c51c8d821822c05da307d5dee23e 365 Gene3D G3DSA:3.20.20.70 9 292 7.4E-51 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_RS04290 cee9c51c8d821822c05da307d5dee23e 365 SUPERFAMILY SSF51412 8 357 7.33E-51 T 11-11-2016 SHALO_RS04290 cee9c51c8d821822c05da307d5dee23e 365 Pfam PF03060 Nitronate monooxygenase 5 361 5.8E-85 T 11-11-2016 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 SHALO_RS03720 9c480c72c4ea9e5f5d59003a7370633f 94 Pfam PF13453 Transcription factor zinc-finger 2 43 5.0E-22 T 11-11-2016 IPR027392 Transcription factor zinc-finger SHALO_RS10380 8fca7791ef0e2d73f5e3526b0d2576bb 164 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 113 160 5.0E-11 T 11-11-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain SHALO_RS10380 8fca7791ef0e2d73f5e3526b0d2576bb 164 Pfam PF00460 Flagella basal body rod protein 9 34 2.9E-9 T 11-11-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 SHALO_RS10380 8fca7791ef0e2d73f5e3526b0d2576bb 164 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 4 163 4.9E-55 T 11-11-2016 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 SHALO_RS10380 8fca7791ef0e2d73f5e3526b0d2576bb 164 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 11-11-2016 IPR019776 Flagellar basal body rod protein, conserved site SHALO_RS08040 566c85f0d9212232165acafe851832ef 123 Gene3D G3DSA:1.10.760.10 35 117 1.9E-13 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS08040 566c85f0d9212232165acafe851832ef 123 Pfam PF00034 Cytochrome c 36 116 1.3E-5 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS08040 566c85f0d9212232165acafe851832ef 123 SUPERFAMILY SSF46626 3 119 4.49E-11 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS14515 a864c797ea4bb39e4fc21f5b9f2b0e61 218 Gene3D G3DSA:3.40.190.10 3 75 2.3E-23 T 11-11-2016 SHALO_RS14515 a864c797ea4bb39e4fc21f5b9f2b0e61 218 Gene3D G3DSA:3.40.190.10 142 217 2.3E-23 T 11-11-2016 SHALO_RS14515 a864c797ea4bb39e4fc21f5b9f2b0e61 218 Pfam PF02621 Menaquinone biosynthesis 107 216 4.9E-11 T 11-11-2016 IPR003773 Menaquinone biosynthesis enzyme SHALO_RS14515 a864c797ea4bb39e4fc21f5b9f2b0e61 218 Pfam PF02621 Menaquinone biosynthesis 4 85 7.3E-6 T 11-11-2016 IPR003773 Menaquinone biosynthesis enzyme SHALO_RS14515 a864c797ea4bb39e4fc21f5b9f2b0e61 218 Gene3D G3DSA:3.40.190.10 107 141 2.5E-4 T 11-11-2016 SHALO_RS14515 a864c797ea4bb39e4fc21f5b9f2b0e61 218 SUPERFAMILY SSF53850 1 217 1.85E-47 T 11-11-2016 SHALO_RS14515 a864c797ea4bb39e4fc21f5b9f2b0e61 218 Hamap MF_00995 Chorismate dehydratase [mqnA]. 2 218 20.048 T 11-11-2016 IPR030868 Chorismate dehydratase GO:0009234|GO:0016829 KEGG: 00130+4.2.1.151|MetaCyc: PWY-7371|MetaCyc: PWY-7374 SHALO_RS04500 800046c595e6542382d4b9e133706d58 392 Gene3D G3DSA:3.30.565.10 257 356 4.1E-8 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS04500 800046c595e6542382d4b9e133706d58 392 Pfam PF07568 Histidine kinase 205 278 1.4E-20 T 11-11-2016 IPR011495 Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain SHALO_RS04500 800046c595e6542382d4b9e133706d58 392 SUPERFAMILY SSF55874 263 379 3.93E-11 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS11065 47dd0b980e84806676f432e7483afce0 121 SUPERFAMILY SSF52172 2 120 1.57E-35 T 11-11-2016 IPR011006 CheY-like superfamily SHALO_RS11065 47dd0b980e84806676f432e7483afce0 121 SMART SM00448 1 116 3.7E-37 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS11065 47dd0b980e84806676f432e7483afce0 121 Pfam PF00072 Response regulator receiver domain 4 116 1.0E-29 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS11065 47dd0b980e84806676f432e7483afce0 121 Gene3D G3DSA:3.40.50.2300 2 120 2.2E-36 T 11-11-2016 SHALO_RS07180 df3c3e60e8f00d140bfb92ea9b398aea 185 Gene3D G3DSA:3.40.920.10 2 180 1.0E-29 T 11-11-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 SHALO_RS07180 df3c3e60e8f00d140bfb92ea9b398aea 185 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 11 175 4.4E-25 T 11-11-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 SHALO_RS07180 df3c3e60e8f00d140bfb92ea9b398aea 185 SUPERFAMILY SSF53323 2 180 1.03E-34 T 11-11-2016 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 SHALO_RS07300 7ae7d6cb21bfb0c0b98b44f5aba05fa4 239 SUPERFAMILY SSF53474 14 237 1.56E-29 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold SHALO_RS07300 7ae7d6cb21bfb0c0b98b44f5aba05fa4 239 Pfam PF12697 Alpha/beta hydrolase family 28 152 3.0E-11 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 SHALO_RS07300 7ae7d6cb21bfb0c0b98b44f5aba05fa4 239 Gene3D G3DSA:3.40.50.1820 14 237 9.0E-33 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold SHALO_RS15145 61b7ae54259060e15142a4963c61752e 231 Pfam PF13860 FlgD Ig-like domain 109 184 2.2E-18 T 11-11-2016 IPR025965 FlgD Ig-like domain SHALO_RS15145 61b7ae54259060e15142a4963c61752e 231 Pfam PF03963 Flagellar hook capping protein - N-terminal region 14 79 5.3E-17 T 11-11-2016 IPR005648 Flagellar hook capping protein SHALO_RS05315 db4beb8498abcc3c5e3fa5aac78412b9 220 Pfam PF04168 A predicted alpha-helical domain with a conserved ER motif. 6 173 5.0E-23 T 11-11-2016 IPR007296 Domain of unknown function DUF403 SHALO_RS13925 7249a2dc75aa5fb99f4c2292f54e35dd 191 Gene3D G3DSA:3.30.1130.10 57 184 1.2E-58 T 11-11-2016 SHALO_RS13925 7249a2dc75aa5fb99f4c2292f54e35dd 191 Pfam PF01227 GTP cyclohydrolase I 8 183 9.0E-77 T 11-11-2016 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|Reactome: R-HSA-1474151 SHALO_RS13925 7249a2dc75aa5fb99f4c2292f54e35dd 191 SUPERFAMILY SSF55620 4 184 5.19E-76 T 11-11-2016 SHALO_RS13925 7249a2dc75aa5fb99f4c2292f54e35dd 191 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 8 183 6.8E-74 T 11-11-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|Reactome: R-HSA-1474151 SHALO_RS13925 7249a2dc75aa5fb99f4c2292f54e35dd 191 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 64 80 - T 11-11-2016 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|Reactome: R-HSA-1474151 SHALO_RS13925 7249a2dc75aa5fb99f4c2292f54e35dd 191 Gene3D G3DSA:1.10.286.10 4 53 4.9E-23 T 11-11-2016 SHALO_RS13925 7249a2dc75aa5fb99f4c2292f54e35dd 191 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 3 184 39.683 T 11-11-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|Reactome: R-HSA-1474151 SHALO_RS03735 69a4ac5d132d5768300d1ad0c4782653 470 Pfam PF00425 chorismate binding enzyme 203 457 8.8E-92 T 11-11-2016 IPR015890 Chorismate-utilising enzyme, C-terminal SHALO_RS03735 69a4ac5d132d5768300d1ad0c4782653 470 SUPERFAMILY SSF56322 4 466 3.01E-131 T 11-11-2016 IPR005801 ADC synthase GO:0009058 SHALO_RS03735 69a4ac5d132d5768300d1ad0c4782653 470 Pfam PF04715 Anthranilate synthase component I, N terminal region 10 161 4.1E-20 T 11-11-2016 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 SHALO_RS03735 69a4ac5d132d5768300d1ad0c4782653 470 Gene3D G3DSA:3.60.120.10 4 466 2.5E-139 T 11-11-2016 IPR005801 ADC synthase GO:0009058 SHALO_RS03735 69a4ac5d132d5768300d1ad0c4782653 470 PRINTS PR00095 Anthranilate synthase component I signature 399 413 1.3E-22 T 11-11-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 SHALO_RS03735 69a4ac5d132d5768300d1ad0c4782653 470 PRINTS PR00095 Anthranilate synthase component I signature 319 332 1.3E-22 T 11-11-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 SHALO_RS03735 69a4ac5d132d5768300d1ad0c4782653 470 PRINTS PR00095 Anthranilate synthase component I signature 414 428 1.3E-22 T 11-11-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 SHALO_RS03735 69a4ac5d132d5768300d1ad0c4782653 470 PRINTS PR00095 Anthranilate synthase component I signature 305 318 1.3E-22 T 11-11-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 SHALO_RS01880 e615b68988c14ce2d9588f9eee6eebea 83 SUPERFAMILY SSF143011 1 82 2.09E-19 T 11-11-2016 SHALO_RS01880 e615b68988c14ce2d9588f9eee6eebea 83 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 5 83 7.0E-9 T 11-11-2016 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family SHALO_RS01880 e615b68988c14ce2d9588f9eee6eebea 83 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 3 83 1.1E-7 T 11-11-2016 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family SHALO_RS07700 3bda9ca1d81e3ae56c0f61277e4ea7f4 575 Gene3D G3DSA:3.40.50.300 331 563 4.7E-81 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS07700 3bda9ca1d81e3ae56c0f61277e4ea7f4 575 Pfam PF00664 ABC transporter transmembrane region 21 285 2.2E-47 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SHALO_RS07700 3bda9ca1d81e3ae56c0f61277e4ea7f4 575 Pfam PF00005 ABC transporter 349 498 3.6E-35 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_RS07700 3bda9ca1d81e3ae56c0f61277e4ea7f4 575 Gene3D G3DSA:1.20.1560.10 2 312 1.9E-68 T 11-11-2016 SHALO_RS07700 3bda9ca1d81e3ae56c0f61277e4ea7f4 575 SUPERFAMILY SSF52540 324 569 1.22E-91 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS07700 3bda9ca1d81e3ae56c0f61277e4ea7f4 575 SUPERFAMILY SSF90123 4 312 5.1E-68 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SHALO_RS07700 3bda9ca1d81e3ae56c0f61277e4ea7f4 575 SMART SM00382 358 544 7.3E-17 T 11-11-2016 IPR003593 AAA+ ATPase domain SHALO_RS10240 eaa9e00e12d0ae3d3501c1eb535d43d4 239 SUPERFAMILY SSF102705 1 237 5.62E-63 T 11-11-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 SHALO_RS10240 eaa9e00e12d0ae3d3501c1eb535d43d4 239 Gene3D G3DSA:3.40.1390.30 1 108 3.8E-30 T 11-11-2016 SHALO_RS10240 eaa9e00e12d0ae3d3501c1eb535d43d4 239 Gene3D G3DSA:3.40.1390.30 109 204 1.3E-17 T 11-11-2016 SHALO_RS10240 eaa9e00e12d0ae3d3501c1eb535d43d4 239 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 6 223 3.4E-58 T 11-11-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 SHALO_RS10240 eaa9e00e12d0ae3d3501c1eb535d43d4 239 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 1 221 3.1E-45 T 11-11-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 SHALO_RS09005 51d7fd1c0b125fbcd4e54b32ba39ba77 486 Pfam PF13624 SurA N-terminal domain 1 164 4.3E-44 T 11-11-2016 SHALO_RS09005 51d7fd1c0b125fbcd4e54b32ba39ba77 486 Pfam PF13145 PPIC-type PPIASE domain 241 356 3.3E-10 T 11-11-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 SHALO_RS09005 51d7fd1c0b125fbcd4e54b32ba39ba77 486 SUPERFAMILY SSF109998 44 168 2.39E-20 T 11-11-2016 IPR027304 Trigger factor/SurA domain SHALO_RS09005 51d7fd1c0b125fbcd4e54b32ba39ba77 486 SUPERFAMILY SSF109998 198 231 2.39E-20 T 11-11-2016 IPR027304 Trigger factor/SurA domain SHALO_RS15170 da360d9d20b608bdc06fb2a0283846b2 204 Pfam PF02511 Thymidylate synthase complementing protein 9 190 3.8E-47 T 11-11-2016 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|KEGG: 00670+2.1.1.148|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6545|MetaCyc: PWY-6936|MetaCyc: PWY-702 SHALO_RS15170 da360d9d20b608bdc06fb2a0283846b2 204 Hamap MF_01408 Thymidylate synthase ThyX [thyX]. 1 203 22.645 T 11-11-2016 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|KEGG: 00670+2.1.1.148|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6545|MetaCyc: PWY-6936|MetaCyc: PWY-702 SHALO_RS15170 da360d9d20b608bdc06fb2a0283846b2 204 SUPERFAMILY SSF69796 1 202 2.62E-49 T 11-11-2016 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|KEGG: 00670+2.1.1.148|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6545|MetaCyc: PWY-6936|MetaCyc: PWY-702 SHALO_RS15170 da360d9d20b608bdc06fb2a0283846b2 204 TIGRFAM TIGR02170 thyX: thymidylate synthase, flavin-dependent 12 198 1.4E-49 T 11-11-2016 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|KEGG: 00670+2.1.1.148|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6545|MetaCyc: PWY-6936|MetaCyc: PWY-702 SHALO_RS10930 85c5493c3a34371394da498ec2957bac 145 SUPERFAMILY SSF55961 4 138 4.62E-19 T 11-11-2016 SHALO_RS10930 85c5493c3a34371394da498ec2957bac 145 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 13 130 2.5E-7 T 11-11-2016 IPR005031 Coenzyme Q-binding protein COQ10, START domain SHALO_RS12635 811edfacf220b3dcf5dc45d5256f8115 820 Pfam PF07664 Ferrous iron transport protein B C terminus 459 512 1.6E-14 T 11-11-2016 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 SHALO_RS12635 811edfacf220b3dcf5dc45d5256f8115 820 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 8 551 8.0E-130 T 11-11-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 SHALO_RS12635 811edfacf220b3dcf5dc45d5256f8115 820 Gene3D G3DSA:3.40.50.300 2 182 1.1E-34 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS12635 811edfacf220b3dcf5dc45d5256f8115 820 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 2 149 5.3E-12 T 11-11-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SHALO_RS12635 811edfacf220b3dcf5dc45d5256f8115 820 Pfam PF07670 Nucleoside recognition 353 449 2.1E-11 T 11-11-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 SHALO_RS12635 811edfacf220b3dcf5dc45d5256f8115 820 Pfam PF07670 Nucleoside recognition 520 750 4.8E-15 T 11-11-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 SHALO_RS12635 811edfacf220b3dcf5dc45d5256f8115 820 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 25 43 6.5E-5 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 SHALO_RS12635 811edfacf220b3dcf5dc45d5256f8115 820 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 4 24 6.5E-5 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 SHALO_RS12635 811edfacf220b3dcf5dc45d5256f8115 820 SUPERFAMILY SSF52540 2 185 2.38E-41 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS12635 811edfacf220b3dcf5dc45d5256f8115 820 Pfam PF02421 Ferrous iron transport protein B 2 156 8.3E-62 T 11-11-2016 IPR011619 Ferrous iron transport protein B, N-terminal GO:0005525|GO:0015093|GO:0015684|GO:0016021 SHALO_RS01315 7fc2c8804a9de80aa8caaae6acf7a5c4 576 PIRSF PIRSF004862 1 564 1.1E-127 T 11-11-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 SHALO_RS01315 7fc2c8804a9de80aa8caaae6acf7a5c4 576 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 8 562 1.5E-132 T 11-11-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 SHALO_RS01315 7fc2c8804a9de80aa8caaae6acf7a5c4 576 Pfam PF08345 Flagellar M-ring protein C-terminal 257 425 2.7E-40 T 11-11-2016 IPR013556 Flagellar M-ring C-terminal SHALO_RS01315 7fc2c8804a9de80aa8caaae6acf7a5c4 576 Pfam PF01514 Secretory protein of YscJ/FliF family 29 221 6.8E-63 T 11-11-2016 IPR006182 Secretory protein YscJ/FliF SHALO_RS01315 7fc2c8804a9de80aa8caaae6acf7a5c4 576 PRINTS PR01009 Flagellar M-ring protein signature 155 169 9.4E-34 T 11-11-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 SHALO_RS01315 7fc2c8804a9de80aa8caaae6acf7a5c4 576 PRINTS PR01009 Flagellar M-ring protein signature 198 216 9.4E-34 T 11-11-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 SHALO_RS01315 7fc2c8804a9de80aa8caaae6acf7a5c4 576 PRINTS PR01009 Flagellar M-ring protein signature 123 141 9.4E-34 T 11-11-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 SHALO_RS01315 7fc2c8804a9de80aa8caaae6acf7a5c4 576 PRINTS PR01009 Flagellar M-ring protein signature 270 288 9.4E-34 T 11-11-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 SHALO_RS01315 7fc2c8804a9de80aa8caaae6acf7a5c4 576 PRINTS PR01009 Flagellar M-ring protein signature 343 367 9.4E-34 T 11-11-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 SHALO_RS13265 cd055b64c82ccf25f4d3ee0e306744c2 380 Gene3D G3DSA:1.20.1250.20 14 189 8.0E-31 T 11-11-2016 SHALO_RS13265 cd055b64c82ccf25f4d3ee0e306744c2 380 Gene3D G3DSA:1.20.1250.20 207 372 8.8E-13 T 11-11-2016 SHALO_RS13265 cd055b64c82ccf25f4d3ee0e306744c2 380 SUPERFAMILY SSF103473 12 372 1.14E-56 T 11-11-2016 IPR020846 Major facilitator superfamily domain SHALO_RS13265 cd055b64c82ccf25f4d3ee0e306744c2 380 Pfam PF07690 Major Facilitator Superfamily 15 231 1.5E-31 T 11-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SHALO_RS13265 cd055b64c82ccf25f4d3ee0e306744c2 380 PRINTS PR01035 Tetracycline resistance protein signature 20 36 2.1E-14 T 11-11-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 SHALO_RS13265 cd055b64c82ccf25f4d3ee0e306744c2 380 PRINTS PR01035 Tetracycline resistance protein signature 133 155 2.1E-14 T 11-11-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 SHALO_RS13265 cd055b64c82ccf25f4d3ee0e306744c2 380 PRINTS PR01035 Tetracycline resistance protein signature 161 181 2.1E-14 T 11-11-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 SHALO_RS14540 2f720577e79c88f03cec65a01315fda6 284 SUPERFAMILY SSF109998 27 179 8.63E-21 T 11-11-2016 IPR027304 Trigger factor/SurA domain SHALO_RS07875 bfda919367fc0376331dec9645910635 504 Pfam PF13311 Protein of unknown function (DUF4080) 357 484 1.1E-17 T 11-11-2016 IPR025288 Domain of unknown function DUF4080 SHALO_RS07875 bfda919367fc0376331dec9645910635 504 Pfam PF02310 B12 binding domain 15 122 3.1E-10 T 11-11-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 SHALO_RS07875 bfda919367fc0376331dec9645910635 504 SUPERFAMILY SSF102114 157 355 1.7E-31 T 11-11-2016 SHALO_RS07875 bfda919367fc0376331dec9645910635 504 Pfam PF04055 Radical SAM superfamily 167 322 1.6E-12 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SHALO_RS07875 bfda919367fc0376331dec9645910635 504 SMART SM00729 162 371 9.2E-11 T 11-11-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 SHALO_RS07875 bfda919367fc0376331dec9645910635 504 Gene3D G3DSA:3.80.30.20 162 377 7.8E-32 T 11-11-2016 IPR023404 Radical SAM, alpha/beta horseshoe SHALO_RS07845 66f6024a8e6e48fb3b8d43ca1d0c87ac 702 Pfam PF09397 Ftsk gamma domain 641 701 2.6E-24 T 11-11-2016 IPR018541 FtsK gamma domain SHALO_RS07845 66f6024a8e6e48fb3b8d43ca1d0c87ac 702 Pfam PF01580 FtsK/SpoIIIE family 487 537 1.0E-14 T 11-11-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 SHALO_RS07845 66f6024a8e6e48fb3b8d43ca1d0c87ac 702 Pfam PF01580 FtsK/SpoIIIE family 347 483 9.6E-48 T 11-11-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 SHALO_RS07845 66f6024a8e6e48fb3b8d43ca1d0c87ac 702 SMART SM00382 382 558 0.0016 T 11-11-2016 IPR003593 AAA+ ATPase domain SHALO_RS07845 66f6024a8e6e48fb3b8d43ca1d0c87ac 702 SUPERFAMILY SSF46785 639 701 8.43E-18 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS07845 66f6024a8e6e48fb3b8d43ca1d0c87ac 702 Gene3D G3DSA:3.40.50.300 321 602 2.0E-81 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS07845 66f6024a8e6e48fb3b8d43ca1d0c87ac 702 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 16 131 3.4E-10 T 11-11-2016 IPR025199 DNA translocase FtsK, 4TM region SHALO_RS07845 66f6024a8e6e48fb3b8d43ca1d0c87ac 702 SUPERFAMILY SSF52540 320 609 7.66E-46 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS07845 66f6024a8e6e48fb3b8d43ca1d0c87ac 702 SMART SM00843 639 702 4.4E-27 T 11-11-2016 IPR018541 FtsK gamma domain SHALO_RS12060 23b8ba42c5dfdee6510892d4d5b7629c 286 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 208 220 - T 11-11-2016 IPR000092 Polyprenyl synthetase GO:0008299 SHALO_RS12060 23b8ba42c5dfdee6510892d4d5b7629c 286 SUPERFAMILY SSF48576 20 271 9.83E-72 T 11-11-2016 IPR008949 Isoprenoid synthase domain SHALO_RS12060 23b8ba42c5dfdee6510892d4d5b7629c 286 Gene3D G3DSA:1.10.600.10 14 281 2.1E-77 T 11-11-2016 IPR008949 Isoprenoid synthase domain SHALO_RS12060 23b8ba42c5dfdee6510892d4d5b7629c 286 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 78 94 - T 11-11-2016 IPR000092 Polyprenyl synthetase GO:0008299 SHALO_RS12060 23b8ba42c5dfdee6510892d4d5b7629c 286 Pfam PF00348 Polyprenyl synthetase 27 261 3.4E-49 T 11-11-2016 IPR000092 Polyprenyl synthetase GO:0008299 SHALO_RS13880 705b06f1a570e0bdff9c2fb59fed5727 76 SUPERFAMILY SSF101744 3 70 2.62E-7 T 11-11-2016 IPR023534 Rof/RNase P-like Reactome: R-HSA-6784531 SHALO_RS02875 b8dc7e8a376f47f2bcb46f2e96154352 141 SUPERFAMILY SSF46785 3 130 8.16E-24 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS02875 b8dc7e8a376f47f2bcb46f2e96154352 141 Pfam PF01475 Ferric uptake regulator family 11 121 2.2E-20 T 11-11-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 SHALO_RS02875 b8dc7e8a376f47f2bcb46f2e96154352 141 Gene3D G3DSA:1.10.10.10 2 80 2.4E-16 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS06685 97007f4ccdd3806c3829f1323e1caa02 267 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 5 256 5.5E-108 T 11-11-2016 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 SHALO_RS06685 97007f4ccdd3806c3829f1323e1caa02 267 SUPERFAMILY SSF53613 1 259 5.46E-88 T 11-11-2016 IPR029056 Ribokinase-like SHALO_RS06685 97007f4ccdd3806c3829f1323e1caa02 267 Pfam PF08543 Phosphomethylpyrimidine kinase 11 254 5.3E-103 T 11-11-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-964975 SHALO_RS06685 97007f4ccdd3806c3829f1323e1caa02 267 Gene3D G3DSA:3.40.1190.20 2 256 3.7E-110 T 11-11-2016 IPR029056 Ribokinase-like SHALO_RS10655 b9f2ff1f65766e2fa687c8af136b776d 231 SUPERFAMILY SSF116726 146 227 5.1E-9 T 11-11-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SHALO_RS10655 b9f2ff1f65766e2fa687c8af136b776d 231 Gene3D G3DSA:3.30.70.1450 151 229 2.3E-10 T 11-11-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SHALO_RS10655 b9f2ff1f65766e2fa687c8af136b776d 231 Gene3D G3DSA:3.40.50.720 4 144 2.1E-21 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS10655 b9f2ff1f65766e2fa687c8af136b776d 231 SUPERFAMILY SSF51735 4 144 1.71E-20 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS10655 b9f2ff1f65766e2fa687c8af136b776d 231 Pfam PF02254 TrkA-N domain 6 120 7.8E-16 T 11-11-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 SHALO_RS04385 ca1a0e9bd1eefbb144415b4024400265 152 Pfam PF00583 Acetyltransferase (GNAT) family 46 117 4.8E-10 T 11-11-2016 IPR000182 GNAT domain GO:0008080 SHALO_RS04385 ca1a0e9bd1eefbb144415b4024400265 152 SUPERFAMILY SSF55729 36 151 1.72E-18 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase SHALO_RS04385 ca1a0e9bd1eefbb144415b4024400265 152 Gene3D G3DSA:3.40.630.30 2 145 6.2E-26 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase SHALO_RS03155 531854b2fef1a29fd0ff98c5cfd8059c 93 Gene3D G3DSA:3.40.1620.10 8 53 2.4E-5 T 11-11-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM SHALO_RS03155 531854b2fef1a29fd0ff98c5cfd8059c 93 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 9 59 4.2E-9 T 11-11-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM SHALO_RS03155 531854b2fef1a29fd0ff98c5cfd8059c 93 SUPERFAMILY SSF143120 6 79 4.45E-14 T 11-11-2016 SHALO_RS03155 531854b2fef1a29fd0ff98c5cfd8059c 93 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 6 71 2.2E-12 T 11-11-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM SHALO_RS13705 a8f2a09319ebc2cdd99dc679191e5686 91 Gene3D G3DSA:3.30.70.100 17 87 1.4E-15 T 11-11-2016 SHALO_RS13705 a8f2a09319ebc2cdd99dc679191e5686 91 PRINTS PR00946 Mercury scavenger protein signature 26 42 5.0E-7 T 11-11-2016 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 SHALO_RS13705 a8f2a09319ebc2cdd99dc679191e5686 91 PRINTS PR00946 Mercury scavenger protein signature 42 57 5.0E-7 T 11-11-2016 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 SHALO_RS13705 a8f2a09319ebc2cdd99dc679191e5686 91 PRINTS PR00946 Mercury scavenger protein signature 15 26 5.0E-7 T 11-11-2016 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 SHALO_RS13705 a8f2a09319ebc2cdd99dc679191e5686 91 PRINTS PR00946 Mercury scavenger protein signature 70 84 5.0E-7 T 11-11-2016 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 SHALO_RS13705 a8f2a09319ebc2cdd99dc679191e5686 91 SUPERFAMILY SSF55008 18 85 1.57E-15 T 11-11-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SHALO_RS13705 a8f2a09319ebc2cdd99dc679191e5686 91 Pfam PF00403 Heavy-metal-associated domain 20 80 9.0E-12 T 11-11-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SHALO_RS04890 a043797dd2c839d89bda567810eb04ea 168 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 7 43 0.0015 T 11-11-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal SHALO_RS04890 a043797dd2c839d89bda567810eb04ea 168 Gene3D G3DSA:2.102.10.10 10 160 1.4E-34 T 11-11-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 SHALO_RS04890 a043797dd2c839d89bda567810eb04ea 168 Pfam PF00355 Rieske [2Fe-2S] domain 49 142 7.3E-12 T 11-11-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 SHALO_RS04890 a043797dd2c839d89bda567810eb04ea 168 SUPERFAMILY SSF50022 29 155 4.19E-28 T 11-11-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 SHALO_RS04890 a043797dd2c839d89bda567810eb04ea 168 PRINTS PR00162 Rieske 2Fe-2S subunit signature 94 105 9.2E-8 T 11-11-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 SHALO_RS04890 a043797dd2c839d89bda567810eb04ea 168 PRINTS PR00162 Rieske 2Fe-2S subunit signature 127 139 9.2E-8 T 11-11-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 SHALO_RS04890 a043797dd2c839d89bda567810eb04ea 168 PRINTS PR00162 Rieske 2Fe-2S subunit signature 115 127 9.2E-8 T 11-11-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 SHALO_RS12085 d454bfe06ff22dd91953f7c745712146 187 Gene3D G3DSA:1.25.40.10 2 65 1.7E-7 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SHALO_RS12085 d454bfe06ff22dd91953f7c745712146 187 Gene3D G3DSA:1.25.40.10 143 180 1.7E-7 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SHALO_RS12085 d454bfe06ff22dd91953f7c745712146 187 SUPERFAMILY SSF48452 6 58 2.5E-6 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SHALO_RS12085 d454bfe06ff22dd91953f7c745712146 187 SUPERFAMILY SSF48452 156 179 2.5E-6 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SHALO_RS08020 86a405ce59dda345013515cb76d7a619 236 SUPERFAMILY SSF52540 5 213 1.06E-49 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS08020 86a405ce59dda345013515cb76d7a619 236 Gene3D G3DSA:3.40.50.300 5 207 2.4E-50 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS08020 86a405ce59dda345013515cb76d7a619 236 Pfam PF00005 ABC transporter 21 167 1.3E-31 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_RS08020 86a405ce59dda345013515cb76d7a619 236 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHALO_RS08020 86a405ce59dda345013515cb76d7a619 236 SMART SM00382 29 213 1.0E-7 T 11-11-2016 IPR003593 AAA+ ATPase domain SHALO_RS11255 68367a0d6b42980bfaf81d169821681c 295 Gene3D G3DSA:3.40.50.2000 1 97 7.9E-11 T 11-11-2016 SHALO_RS11255 68367a0d6b42980bfaf81d169821681c 295 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 124 265 5.4E-25 T 11-11-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 SHALO_RS11255 68367a0d6b42980bfaf81d169821681c 295 SUPERFAMILY SSF53756 1 287 1.13E-45 T 11-11-2016 SHALO_RS11255 68367a0d6b42980bfaf81d169821681c 295 Gene3D G3DSA:3.40.50.2000 128 286 1.9E-29 T 11-11-2016 SHALO_RS10635 32b28a93be1e588f4dd8e5f2659af273 438 Pfam PF17129 C-terminal domain of metallo-carboxypeptidase 336 430 2.2E-22 T 11-11-2016 IPR033397 Metallo-carboxypeptidase, C-terminal domain SHALO_RS10635 32b28a93be1e588f4dd8e5f2659af273 438 Gene3D G3DSA:3.40.630.10 30 244 3.5E-15 T 11-11-2016 SHALO_RS10635 32b28a93be1e588f4dd8e5f2659af273 438 Pfam PF17033 Carboxypeptidase controlling helical cell shape catalytic 7 265 1.5E-71 T 11-11-2016 IPR031489 D,L-carboxypeptidase, peptidase domain SHALO_RS10635 32b28a93be1e588f4dd8e5f2659af273 438 SUPERFAMILY SSF53187 29 250 2.15E-27 T 11-11-2016 SHALO_RS12420 2267b1cbadefe4eca255c2520f4cb413 145 Pfam PF02635 DsrE/DsrF-like family 43 138 2.2E-8 T 11-11-2016 IPR003787 Sulphur relay, DsrE/F-like protein SHALO_RS12420 2267b1cbadefe4eca255c2520f4cb413 145 Gene3D G3DSA:3.40.1260.10 30 140 3.5E-25 T 11-11-2016 IPR027396 DsrEFH-like SHALO_RS12420 2267b1cbadefe4eca255c2520f4cb413 145 SUPERFAMILY SSF75169 31 143 4.71E-23 T 11-11-2016 IPR027396 DsrEFH-like SHALO_RS13760 cc40bec37b57230a908757eeb956b502 246 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHALO_RS13760 cc40bec37b57230a908757eeb956b502 246 Gene3D G3DSA:3.40.50.300 3 216 3.7E-64 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS13760 cc40bec37b57230a908757eeb956b502 246 SMART SM00382 28 218 8.7E-14 T 11-11-2016 IPR003593 AAA+ ATPase domain SHALO_RS13760 cc40bec37b57230a908757eeb956b502 246 SUPERFAMILY SSF52540 3 216 6.78E-61 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS13760 cc40bec37b57230a908757eeb956b502 246 Pfam PF00005 ABC transporter 19 168 1.5E-31 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_RS12075 145d2dabe527d7ecd9d33af53cc7b4f8 121 Pfam PF02261 Aspartate decarboxylase 1 114 3.4E-51 T 11-11-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 SHALO_RS12075 145d2dabe527d7ecd9d33af53cc7b4f8 121 SUPERFAMILY SSF50692 1 120 2.82E-48 T 11-11-2016 IPR009010 Aspartate decarboxylase-like domain SHALO_RS12075 145d2dabe527d7ecd9d33af53cc7b4f8 121 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 91 5.0E-36 T 11-11-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 SHALO_RS12075 145d2dabe527d7ecd9d33af53cc7b4f8 121 PIRSF PIRSF006246 1 120 1.0E-50 T 11-11-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 SHALO_RS12075 145d2dabe527d7ecd9d33af53cc7b4f8 121 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 121 67.763 T 11-11-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 SHALO_RS12075 145d2dabe527d7ecd9d33af53cc7b4f8 121 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 117 3.3E-51 T 11-11-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 SHALO_RS12075 145d2dabe527d7ecd9d33af53cc7b4f8 121 Gene3D G3DSA:2.40.40.20 1 120 1.9E-53 T 11-11-2016 SHALO_RS06160 4b7ce575e94af73b6465fca59116f384 128 SUPERFAMILY SSF88723 1 122 1.23E-13 T 11-11-2016 IPR029060 PIN domain-like SHALO_RS06160 4b7ce575e94af73b6465fca59116f384 128 Gene3D G3DSA:3.40.50.1010 2 117 2.5E-4 T 11-11-2016 IPR029060 PIN domain-like SHALO_RS06160 4b7ce575e94af73b6465fca59116f384 128 Pfam PF01850 PIN domain 5 118 4.0E-8 T 11-11-2016 IPR002716 PIN domain SHALO_RS03620 311e434dce8bac19dc957da954d7c717 445 Pfam PF00324 Amino acid permease 14 444 2.6E-110 T 11-11-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 SHALO_RS03620 311e434dce8bac19dc957da954d7c717 445 PIRSF PIRSF006060 1 445 1.7E-68 T 11-11-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SHALO_RS03620 311e434dce8bac19dc957da954d7c717 445 ProSitePatterns PS00218 Amino acid permeases signature. 39 69 - T 11-11-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 SHALO_RS03620 311e434dce8bac19dc957da954d7c717 445 Gene3D G3DSA:3.40.50.1820 35 71 1.7E-4 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold SHALO_RS10625 02891966425ee05be9e6b30a3ee38839 291 SUPERFAMILY SSF102114 4 284 9.94E-28 T 11-11-2016 SHALO_RS10625 02891966425ee05be9e6b30a3ee38839 291 Pfam PF04055 Radical SAM superfamily 9 113 1.1E-7 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SHALO_RS10625 02891966425ee05be9e6b30a3ee38839 291 Pfam PF13186 Iron-sulfur cluster-binding domain 216 282 1.1E-10 T 11-11-2016 IPR023885 4Fe4S-binding SPASM domain SHALO_RS10625 02891966425ee05be9e6b30a3ee38839 291 Gene3D G3DSA:3.20.20.70 4 285 5.6E-21 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_RS07585 36aefcb98186cfd07f7fac6eab63e196 305 Pfam PF00037 4Fe-4S binding domain 253 272 1.5E-5 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_RS07585 36aefcb98186cfd07f7fac6eab63e196 305 Pfam PF00037 4Fe-4S binding domain 228 244 1.1E-4 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_RS07585 36aefcb98186cfd07f7fac6eab63e196 305 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 231 242 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_RS07585 36aefcb98186cfd07f7fac6eab63e196 305 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 257 268 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_RS07585 36aefcb98186cfd07f7fac6eab63e196 305 SUPERFAMILY SSF54862 204 288 1.17E-15 T 11-11-2016 SHALO_RS07585 36aefcb98186cfd07f7fac6eab63e196 305 SUPERFAMILY SSF54862 82 157 1.17E-15 T 11-11-2016 SHALO_RS07585 36aefcb98186cfd07f7fac6eab63e196 305 Pfam PF12801 4Fe-4S binding domain 52 58 540.0 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_RS07585 36aefcb98186cfd07f7fac6eab63e196 305 Pfam PF12801 4Fe-4S binding domain 188 216 9.1 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_RS07585 36aefcb98186cfd07f7fac6eab63e196 305 Pfam PF12801 4Fe-4S binding domain 71 98 2.8E-5 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_RS07585 36aefcb98186cfd07f7fac6eab63e196 305 Pfam PF12801 4Fe-4S binding domain 154 165 210.0 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_RS07585 36aefcb98186cfd07f7fac6eab63e196 305 Gene3D G3DSA:3.30.70.20 237 288 2.2E-9 T 11-11-2016 SHALO_RS07585 36aefcb98186cfd07f7fac6eab63e196 305 Gene3D G3DSA:3.30.70.20 154 157 9.1E-7 T 11-11-2016 SHALO_RS07585 36aefcb98186cfd07f7fac6eab63e196 305 Gene3D G3DSA:3.30.70.20 204 236 9.1E-7 T 11-11-2016 SHALO_RS10495 b25d19ce18d3e0ec0078ee4f3a81d254 499 PIRSF PIRSF009451 3 499 1.6E-241 T 11-11-2016 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 SHALO_RS10495 b25d19ce18d3e0ec0078ee4f3a81d254 499 SUPERFAMILY SSF100950 28 228 2.55E-72 T 11-11-2016 SHALO_RS10495 b25d19ce18d3e0ec0078ee4f3a81d254 499 Gene3D G3DSA:3.40.810.20 233 473 4.1E-67 T 11-11-2016 SHALO_RS10495 b25d19ce18d3e0ec0078ee4f3a81d254 499 SUPERFAMILY SSF100950 233 497 4.57E-56 T 11-11-2016 SHALO_RS10495 b25d19ce18d3e0ec0078ee4f3a81d254 499 TIGRFAM TIGR01584 citF: citrate lyase, alpha subunit 32 497 2.1E-226 T 11-11-2016 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 SHALO_RS10495 b25d19ce18d3e0ec0078ee4f3a81d254 499 Pfam PF04223 Citrate lyase, alpha subunit (CitF) 34 497 6.4E-232 T 11-11-2016 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 SHALO_RS10495 b25d19ce18d3e0ec0078ee4f3a81d254 499 Gene3D G3DSA:3.40.1080.10 24 228 3.4E-101 T 11-11-2016 SHALO_RS00840 c680be3dadc930f85cc33866b2ed5852 282 SUPERFAMILY SSF55874 135 275 3.54E-22 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS00840 c680be3dadc930f85cc33866b2ed5852 282 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 176 274 7.3E-14 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS00840 c680be3dadc930f85cc33866b2ed5852 282 SMART SM00387 175 279 4.6E-16 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS00840 c680be3dadc930f85cc33866b2ed5852 282 Gene3D G3DSA:3.30.565.10 140 275 4.2E-22 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS00840 c680be3dadc930f85cc33866b2ed5852 282 SUPERFAMILY SSF47384 60 133 9.02E-6 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS02705 f1d7a1ea3a4236f40aee71dad54d0e8b 908 SUPERFAMILY SSF48371 502 600 1.07E-6 T 11-11-2016 IPR016024 Armadillo-type fold GO:0005488 SHALO_RS02705 f1d7a1ea3a4236f40aee71dad54d0e8b 908 SUPERFAMILY SSF48371 698 869 1.07E-6 T 11-11-2016 IPR016024 Armadillo-type fold GO:0005488 SHALO_RS09860 a6e75303b9a19390a0b89711029faa41 75 SUPERFAMILY SSF50037 4 73 2.04E-14 T 11-11-2016 IPR008988 Transcriptional repressor, C-terminal SHALO_RS09860 a6e75303b9a19390a0b89711029faa41 75 Pfam PF04023 FeoA domain 3 73 6.3E-14 T 11-11-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 SHALO_RS09860 a6e75303b9a19390a0b89711029faa41 75 SMART SM00899 2 74 4.1E-15 T 11-11-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 SHALO_RS04505 9fcc7c15eb23cf9a7b0bb43d61491319 170 Gene3D G3DSA:1.25.40.10 67 165 1.3E-13 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SHALO_RS04505 9fcc7c15eb23cf9a7b0bb43d61491319 170 SUPERFAMILY SSF48452 49 166 6.92E-13 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SHALO_RS00555 6a114a2c7155f0b544e15be21831b6b3 269 SUPERFAMILY SSF55120 64 256 1.29E-28 T 11-11-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SHALO_RS00555 6a114a2c7155f0b544e15be21831b6b3 269 Pfam PF00849 RNA pseudouridylate synthase 65 207 1.1E-10 T 11-11-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 SHALO_RS00555 6a114a2c7155f0b544e15be21831b6b3 269 SUPERFAMILY SSF55174 4 57 3.2E-13 T 11-11-2016 SHALO_RS00555 6a114a2c7155f0b544e15be21831b6b3 269 Gene3D G3DSA:3.10.290.10 4 57 1.6E-18 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 SHALO_RS00555 6a114a2c7155f0b544e15be21831b6b3 269 SMART SM00363 4 61 2.3E-10 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 SHALO_RS00555 6a114a2c7155f0b544e15be21831b6b3 269 Pfam PF01479 S4 domain 4 47 9.7E-9 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 SHALO_RS00555 6a114a2c7155f0b544e15be21831b6b3 269 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 69 239 3.2E-38 T 11-11-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 SHALO_RS05990 e559769cb33e1c81f004fd24c92837f6 181 Gene3D G3DSA:3.90.45.10 5 174 1.8E-53 T 11-11-2016 IPR023635 Peptide deformylase SHALO_RS05990 e559769cb33e1c81f004fd24c92837f6 181 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 6 169 6.3E-42 T 11-11-2016 IPR023635 Peptide deformylase SHALO_RS05990 e559769cb33e1c81f004fd24c92837f6 181 Hamap MF_00163 Peptide deformylase [def]. 3 172 26.216 T 11-11-2016 IPR023635 Peptide deformylase SHALO_RS05990 e559769cb33e1c81f004fd24c92837f6 181 Pfam PF01327 Polypeptide deformylase 5 159 2.6E-50 T 11-11-2016 IPR023635 Peptide deformylase SHALO_RS05990 e559769cb33e1c81f004fd24c92837f6 181 PIRSF PIRSF004749 1 181 1.4E-49 T 11-11-2016 IPR023635 Peptide deformylase SHALO_RS05990 e559769cb33e1c81f004fd24c92837f6 181 SUPERFAMILY SSF56420 4 172 3.01E-53 T 11-11-2016 IPR023635 Peptide deformylase SHALO_RS05990 e559769cb33e1c81f004fd24c92837f6 181 PRINTS PR01576 Peptide deformylase signature 111 129 1.1E-28 T 11-11-2016 IPR023635 Peptide deformylase SHALO_RS05990 e559769cb33e1c81f004fd24c92837f6 181 PRINTS PR01576 Peptide deformylase signature 99 110 1.1E-28 T 11-11-2016 IPR023635 Peptide deformylase SHALO_RS05990 e559769cb33e1c81f004fd24c92837f6 181 PRINTS PR01576 Peptide deformylase signature 130 159 1.1E-28 T 11-11-2016 IPR023635 Peptide deformylase SHALO_RS05990 e559769cb33e1c81f004fd24c92837f6 181 PRINTS PR01576 Peptide deformylase signature 35 64 1.1E-28 T 11-11-2016 IPR023635 Peptide deformylase SHALO_RS04675 07f06748b1c82f388096528cbe56b1ec 295 SUPERFAMILY SSF46689 188 237 2.84E-8 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 SHALO_RS04675 07f06748b1c82f388096528cbe56b1ec 295 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 255 270 6.2E-7 T 11-11-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SHALO_RS04675 07f06748b1c82f388096528cbe56b1ec 295 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 270 286 6.2E-7 T 11-11-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SHALO_RS04675 07f06748b1c82f388096528cbe56b1ec 295 Gene3D G3DSA:1.10.10.60 183 239 2.3E-11 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 SHALO_RS04675 07f06748b1c82f388096528cbe56b1ec 295 Gene3D G3DSA:1.10.10.60 240 288 3.7E-15 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 SHALO_RS04675 07f06748b1c82f388096528cbe56b1ec 295 Pfam PF12833 Helix-turn-helix domain 209 286 2.5E-20 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SHALO_RS04675 07f06748b1c82f388096528cbe56b1ec 295 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 240 282 - T 11-11-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 SHALO_RS04675 07f06748b1c82f388096528cbe56b1ec 295 SUPERFAMILY SSF46689 239 288 4.48E-12 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 SHALO_RS04675 07f06748b1c82f388096528cbe56b1ec 295 SMART SM00342 203 286 7.9E-27 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SHALO_RS04675 07f06748b1c82f388096528cbe56b1ec 295 Pfam PF06719 AraC-type transcriptional regulator N-terminus 24 172 9.4E-31 T 11-11-2016 IPR009594 Transcription regulator HTH, AraC, N-terminal SHALO_RS13445 1a614b0ddb3690b1bd89965364f9a301 280 Gene3D G3DSA:1.10.10.60 233 278 7.8E-14 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 SHALO_RS13445 1a614b0ddb3690b1bd89965364f9a301 280 SUPERFAMILY SSF46689 233 278 8.06E-12 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 SHALO_RS13445 1a614b0ddb3690b1bd89965364f9a301 280 Pfam PF02311 AraC-like ligand binding domain 41 137 9.6E-8 T 11-11-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 SHALO_RS13445 1a614b0ddb3690b1bd89965364f9a301 280 Gene3D G3DSA:2.60.120.280 41 168 6.2E-14 T 11-11-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 SHALO_RS13445 1a614b0ddb3690b1bd89965364f9a301 280 SMART SM00342 192 276 3.6E-13 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SHALO_RS13445 1a614b0ddb3690b1bd89965364f9a301 280 SUPERFAMILY SSF51215 31 164 9.55E-15 T 11-11-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 SHALO_RS13445 1a614b0ddb3690b1bd89965364f9a301 280 Pfam PF12833 Helix-turn-helix domain 199 278 3.7E-17 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SHALO_RS03770 37c8d0dd3ee36c35c5d2c0a16eed1864 315 Pfam PF00990 Diguanylate cyclase, GGDEF domain 155 309 3.9E-39 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS03770 37c8d0dd3ee36c35c5d2c0a16eed1864 315 SMART SM00267 143 314 4.0E-47 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS03770 37c8d0dd3ee36c35c5d2c0a16eed1864 315 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 150 311 1.7E-41 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS03770 37c8d0dd3ee36c35c5d2c0a16eed1864 315 SUPERFAMILY SSF55073 159 312 2.43E-43 T 11-11-2016 IPR029787 Nucleotide cyclase SHALO_RS03770 37c8d0dd3ee36c35c5d2c0a16eed1864 315 Gene3D G3DSA:3.30.70.270 156 312 6.0E-47 T 11-11-2016 SHALO_RS07725 d3624f4d820e8cde8f3c4c71b244e96c 216 Gene3D G3DSA:3.40.50.360 1 210 4.4E-36 T 11-11-2016 IPR029039 Flavoprotein-like domain SHALO_RS07725 d3624f4d820e8cde8f3c4c71b244e96c 216 SUPERFAMILY SSF52218 1 210 1.08E-28 T 11-11-2016 IPR029039 Flavoprotein-like domain SHALO_RS07725 d3624f4d820e8cde8f3c4c71b244e96c 216 Pfam PF03358 NADPH-dependent FMN reductase 1 119 2.0E-14 T 11-11-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 SHALO_RS14070 b64263bcb584fa137d71cab2105b8efb 498 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 287 298 - T 11-11-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 SHALO_RS14070 b64263bcb584fa137d71cab2105b8efb 498 Gene3D G3DSA:3.40.605.10 9 285 9.1E-94 T 11-11-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 SHALO_RS14070 b64263bcb584fa137d71cab2105b8efb 498 Pfam PF00171 Aldehyde dehydrogenase family 20 486 6.0E-157 T 11-11-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 SHALO_RS14070 b64263bcb584fa137d71cab2105b8efb 498 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 254 261 - T 11-11-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 SHALO_RS14070 b64263bcb584fa137d71cab2105b8efb 498 SUPERFAMILY SSF53720 7 490 5.24E-155 T 11-11-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 SHALO_RS14070 b64263bcb584fa137d71cab2105b8efb 498 Gene3D G3DSA:3.40.309.10 286 462 2.3E-56 T 11-11-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 SHALO_RS02535 66d727dbda9fccd1a9653c50c0d20353 168 Gene3D G3DSA:3.30.450.20 17 106 3.4E-19 T 11-11-2016 SHALO_RS02535 66d727dbda9fccd1a9653c50c0d20353 168 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 22 108 2.0E-10 T 11-11-2016 IPR000014 PAS domain SHALO_RS02535 66d727dbda9fccd1a9653c50c0d20353 168 Pfam PF08447 PAS fold 29 106 8.6E-12 T 11-11-2016 IPR013655 PAS fold-3 GO:0005515 SHALO_RS02535 66d727dbda9fccd1a9653c50c0d20353 168 SUPERFAMILY SSF55785 19 106 3.49E-23 T 11-11-2016 IPR000014 PAS domain SHALO_RS13075 5a57c3dc1dcc67f3a7173bfaeaeccaa8 215 Pfam PF00486 Transcriptional regulatory protein, C terminal 143 212 6.7E-11 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS13075 5a57c3dc1dcc67f3a7173bfaeaeccaa8 215 Pfam PF00072 Response regulator receiver domain 3 111 1.4E-22 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS13075 5a57c3dc1dcc67f3a7173bfaeaeccaa8 215 Gene3D G3DSA:1.10.10.10 128 212 7.6E-12 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS13075 5a57c3dc1dcc67f3a7173bfaeaeccaa8 215 SMART SM00862 142 212 7.2E-8 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS13075 5a57c3dc1dcc67f3a7173bfaeaeccaa8 215 Gene3D G3DSA:3.40.50.2300 1 117 8.5E-31 T 11-11-2016 SHALO_RS13075 5a57c3dc1dcc67f3a7173bfaeaeccaa8 215 SUPERFAMILY SSF46894 128 212 5.1E-11 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SHALO_RS13075 5a57c3dc1dcc67f3a7173bfaeaeccaa8 215 SMART SM00448 1 111 3.2E-29 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS13075 5a57c3dc1dcc67f3a7173bfaeaeccaa8 215 SUPERFAMILY SSF52172 1 119 7.83E-28 T 11-11-2016 IPR011006 CheY-like superfamily SHALO_RS06525 5c2d60bb79034d6c0ef823b044a3254c 362 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 126 284 2.0E-45 T 11-11-2016 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS06525 5c2d60bb79034d6c0ef823b044a3254c 362 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 289 362 7.1E-17 T 11-11-2016 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS06525 5c2d60bb79034d6c0ef823b044a3254c 362 Pfam PF00374 Nickel-dependent hydrogenase 44 113 3.0E-7 T 11-11-2016 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 SHALO_RS06525 5c2d60bb79034d6c0ef823b044a3254c 362 SUPERFAMILY SSF56762 26 362 4.58E-103 T 11-11-2016 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS06525 5c2d60bb79034d6c0ef823b044a3254c 362 Gene3D G3DSA:1.10.645.10 2 361 2.0E-68 T 11-11-2016 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS01275 18fc345de2ae0a6861716936054fc625 332 SUPERFAMILY SSF51569 6 331 6.72E-63 T 11-11-2016 SHALO_RS01275 18fc345de2ae0a6861716936054fc625 332 Gene3D G3DSA:3.20.20.70 5 331 1.2E-80 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_RS01275 18fc345de2ae0a6861716936054fc625 332 PIRSF PIRSF036915 3 332 3.0E-67 T 11-11-2016 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 SHALO_RS01275 18fc345de2ae0a6861716936054fc625 332 TIGRFAM TIGR00876 tal_mycobact: transaldolase 7 330 5.4E-84 T 11-11-2016 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 SHALO_RS01275 18fc345de2ae0a6861716936054fc625 332 Hamap MF_00493 Transaldolase [tal]. 1 332 83.441 T 11-11-2016 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 SHALO_RS01275 18fc345de2ae0a6861716936054fc625 332 Pfam PF00923 Transaldolase 10 330 1.2E-78 T 11-11-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336 SHALO_RS04180 217ee3831fb4d02ff5c8d9cb73becf84 132 Gene3D G3DSA:3.30.450.20 16 98 3.3E-19 T 11-11-2016 SHALO_RS04180 217ee3831fb4d02ff5c8d9cb73becf84 132 Pfam PF08447 PAS fold 26 103 2.2E-15 T 11-11-2016 IPR013655 PAS fold-3 GO:0005515 SHALO_RS04180 217ee3831fb4d02ff5c8d9cb73becf84 132 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 16 98 9.9E-9 T 11-11-2016 IPR000014 PAS domain SHALO_RS04180 217ee3831fb4d02ff5c8d9cb73becf84 132 SUPERFAMILY SSF55785 14 98 4.03E-24 T 11-11-2016 IPR000014 PAS domain SHALO_RS14320 7260298c5c8fddcb2bcf567fd8860c43 457 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 1 185 9.9E-12 T 11-11-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SHALO_RS14320 7260298c5c8fddcb2bcf567fd8860c43 457 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 56 71 - T 11-11-2016 IPR031157 Tr-type G domain, conserved site SHALO_RS14320 7260298c5c8fddcb2bcf567fd8860c43 457 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 4 401 2.1E-105 T 11-11-2016 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 SHALO_RS14320 7260298c5c8fddcb2bcf567fd8860c43 457 SUPERFAMILY SSF50447 214 304 1.56E-14 T 11-11-2016 IPR009000 Translation protein, beta-barrel domain SHALO_RS14320 7260298c5c8fddcb2bcf567fd8860c43 457 SUPERFAMILY SSF50465 310 410 2.64E-18 T 11-11-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal SHALO_RS14320 7260298c5c8fddcb2bcf567fd8860c43 457 SUPERFAMILY SSF52540 3 228 7.14E-52 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS14320 7260298c5c8fddcb2bcf567fd8860c43 457 Gene3D G3DSA:3.40.50.300 3 208 2.7E-58 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS14320 7260298c5c8fddcb2bcf567fd8860c43 457 Gene3D G3DSA:2.40.30.10 325 412 2.8E-7 T 11-11-2016 SHALO_RS14320 7260298c5c8fddcb2bcf567fd8860c43 457 Gene3D G3DSA:2.40.30.10 215 324 1.2E-20 T 11-11-2016 SHALO_RS14320 7260298c5c8fddcb2bcf567fd8860c43 457 PRINTS PR00315 GTP-binding elongation factor signature 63 71 3.5E-16 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SHALO_RS14320 7260298c5c8fddcb2bcf567fd8860c43 457 PRINTS PR00315 GTP-binding elongation factor signature 5 18 3.5E-16 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SHALO_RS14320 7260298c5c8fddcb2bcf567fd8860c43 457 PRINTS PR00315 GTP-binding elongation factor signature 99 110 3.5E-16 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SHALO_RS14320 7260298c5c8fddcb2bcf567fd8860c43 457 PRINTS PR00315 GTP-binding elongation factor signature 136 145 3.5E-16 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SHALO_RS14320 7260298c5c8fddcb2bcf567fd8860c43 457 PRINTS PR00315 GTP-binding elongation factor signature 83 93 3.5E-16 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SHALO_RS14320 7260298c5c8fddcb2bcf567fd8860c43 457 Pfam PF00009 Elongation factor Tu GTP binding domain 3 185 4.6E-40 T 11-11-2016 SHALO_RS01280 d684601e4b634fc9ba286b43202d2a07 400 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 20 359 6.3E-126 T 11-11-2016 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 SHALO_RS01280 d684601e4b634fc9ba286b43202d2a07 400 Pfam PF00437 Type II/IV secretion system protein 131 284 3.7E-44 T 11-11-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 SHALO_RS01280 d684601e4b634fc9ba286b43202d2a07 400 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 208 222 - T 11-11-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 SHALO_RS01280 d684601e4b634fc9ba286b43202d2a07 400 SMART SM00382 137 262 5.1E-5 T 11-11-2016 IPR003593 AAA+ ATPase domain SHALO_RS01280 d684601e4b634fc9ba286b43202d2a07 400 SUPERFAMILY SSF52540 19 351 4.35E-63 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS01280 d684601e4b634fc9ba286b43202d2a07 400 Gene3D G3DSA:3.40.50.300 118 354 1.1E-66 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS03115 342b8789ac74d250a96a49d3a13cfaad 532 Gene3D G3DSA:3.30.450.20 40 207 1.1E-31 T 11-11-2016 SHALO_RS03115 342b8789ac74d250a96a49d3a13cfaad 532 SUPERFAMILY SSF47384 297 366 3.92E-5 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS03115 342b8789ac74d250a96a49d3a13cfaad 532 Pfam PF08269 Cache domain 86 207 3.5E-21 T 11-11-2016 IPR004010 Double Cache domain 2 SHALO_RS03115 342b8789ac74d250a96a49d3a13cfaad 532 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 415 520 1.7E-18 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS03115 342b8789ac74d250a96a49d3a13cfaad 532 Gene3D G3DSA:3.30.565.10 369 520 2.7E-33 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS03115 342b8789ac74d250a96a49d3a13cfaad 532 SUPERFAMILY SSF55874 370 519 4.06E-30 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS03115 342b8789ac74d250a96a49d3a13cfaad 532 SMART SM00387 411 523 7.4E-19 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS03115 342b8789ac74d250a96a49d3a13cfaad 532 PRINTS PR00344 Bacterial sensor protein C-terminal signature 507 520 5.9E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS03115 342b8789ac74d250a96a49d3a13cfaad 532 PRINTS PR00344 Bacterial sensor protein C-terminal signature 470 480 5.9E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS03115 342b8789ac74d250a96a49d3a13cfaad 532 PRINTS PR00344 Bacterial sensor protein C-terminal signature 483 501 5.9E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS03115 342b8789ac74d250a96a49d3a13cfaad 532 PRINTS PR00344 Bacterial sensor protein C-terminal signature 452 466 5.9E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SHALO_RS03115 342b8789ac74d250a96a49d3a13cfaad 532 SMART SM01049 48 154 1.7E-4 T 11-11-2016 IPR033480 Single Cache domain 2 SHALO_RS05690 ff64dff17281ac98328e7dc380402b53 256 Pfam PF02481 DNA recombination-mediator protein A 12 194 2.3E-51 T 11-11-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 SHALO_RS05690 ff64dff17281ac98328e7dc380402b53 256 SUPERFAMILY SSF102405 12 191 1.33E-23 T 11-11-2016 SHALO_RS05690 ff64dff17281ac98328e7dc380402b53 256 Gene3D G3DSA:3.40.50.450 32 175 3.1E-10 T 11-11-2016 SHALO_RS10810 37a847d0e65bea7d4628f92e6b567a4f 388 Pfam PF07238 PilZ domain 270 370 3.0E-9 T 11-11-2016 IPR009875 PilZ domain GO:0035438 SHALO_RS10265 e94140591badbd6c1caa2db352f21602 245 Gene3D G3DSA:1.10.287.500 80 202 5.9E-4 T 11-11-2016 SHALO_RS10265 e94140591badbd6c1caa2db352f21602 245 SUPERFAMILY SSF75708 54 243 2.35E-28 T 11-11-2016 SHALO_RS07835 81c58b61cfca7d66e8bb150b4d18b8ea 92 Pfam PF00216 Bacterial DNA-binding protein 1 89 8.5E-27 T 11-11-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SHALO_RS07835 81c58b61cfca7d66e8bb150b4d18b8ea 92 SMART SM00411 1 90 3.0E-32 T 11-11-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SHALO_RS07835 81c58b61cfca7d66e8bb150b4d18b8ea 92 Gene3D G3DSA:4.10.520.10 1 91 1.8E-29 T 11-11-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 SHALO_RS07835 81c58b61cfca7d66e8bb150b4d18b8ea 92 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 5.2E-9 T 11-11-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SHALO_RS07835 81c58b61cfca7d66e8bb150b4d18b8ea 92 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 5.2E-9 T 11-11-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SHALO_RS07835 81c58b61cfca7d66e8bb150b4d18b8ea 92 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 5.2E-9 T 11-11-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SHALO_RS07835 81c58b61cfca7d66e8bb150b4d18b8ea 92 SUPERFAMILY SSF47729 1 90 3.97E-26 T 11-11-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 SHALO_RS11190 9dfe246662801b2c5b56e365f9fbc887 443 Gene3D G3DSA:2.60.120.10 329 441 3.0E-38 T 11-11-2016 IPR014710 RmlC-like jelly roll fold SHALO_RS11190 9dfe246662801b2c5b56e365f9fbc887 443 Gene3D G3DSA:3.90.550.10 3 257 1.9E-89 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases SHALO_RS11190 9dfe246662801b2c5b56e365f9fbc887 443 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 2 440 2.4E-158 T 11-11-2016 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 SHALO_RS11190 9dfe246662801b2c5b56e365f9fbc887 443 SUPERFAMILY SSF53448 4 264 5.42E-64 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases SHALO_RS11190 9dfe246662801b2c5b56e365f9fbc887 443 SUPERFAMILY SSF51182 172 442 1.69E-68 T 11-11-2016 IPR011051 RmlC-like cupin domain SHALO_RS11190 9dfe246662801b2c5b56e365f9fbc887 443 Pfam PF00483 Nucleotidyl transferase 3 271 1.4E-60 T 11-11-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 SHALO_RS11190 9dfe246662801b2c5b56e365f9fbc887 443 Pfam PF01050 Mannose-6-phosphate isomerase 287 436 2.1E-63 T 11-11-2016 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 SHALO_RS13230 66362bc0822835ef62aee583ac2aa7b4 343 SUPERFAMILY SSF55326 7 159 1.79E-34 T 11-11-2016 SHALO_RS13230 66362bc0822835ef62aee583ac2aa7b4 343 Gene3D G3DSA:3.90.650.10 171 333 9.6E-17 T 11-11-2016 IPR010918 AIR synthase-related protein, C-terminal domain SHALO_RS13230 66362bc0822835ef62aee583ac2aa7b4 343 Pfam PF00586 AIR synthase related protein, N-terminal domain 47 154 4.7E-13 T 11-11-2016 IPR016188 PurM-like, N-terminal domain SHALO_RS13230 66362bc0822835ef62aee583ac2aa7b4 343 TIGRFAM TIGR00476 selD: selenide, water dikinase 6 310 2.2E-109 T 11-11-2016 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 SHALO_RS13230 66362bc0822835ef62aee583ac2aa7b4 343 Hamap MF_00625 Selenide, water dikinase [selD]. 4 343 39.015 T 11-11-2016 IPR023061 Selenophosphate synthetase, class I GO:0004756|GO:0005524|GO:0016260 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 SHALO_RS13230 66362bc0822835ef62aee583ac2aa7b4 343 Gene3D G3DSA:3.30.1330.10 36 159 1.2E-18 T 11-11-2016 IPR016188 PurM-like, N-terminal domain SHALO_RS13230 66362bc0822835ef62aee583ac2aa7b4 343 Pfam PF02769 AIR synthase related protein, C-terminal domain 167 338 1.3E-26 T 11-11-2016 IPR010918 AIR synthase-related protein, C-terminal domain SHALO_RS13230 66362bc0822835ef62aee583ac2aa7b4 343 PIRSF PIRSF036407 1 343 2.0E-114 T 11-11-2016 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 SHALO_RS13230 66362bc0822835ef62aee583ac2aa7b4 343 SUPERFAMILY SSF56042 161 329 2.09E-44 T 11-11-2016 IPR010918 AIR synthase-related protein, C-terminal domain SHALO_RS12010 0e299f03071a4ca41d9749fa8b362baa 184 Pfam PF04368 Protein of unknown function (DUF507) 1 182 3.1E-70 T 11-11-2016 IPR007463 Protein of unknown function DUF507 SHALO_RS03820 f8b5b49dfbf27e1255420c19d7f2f1cd 132 SMART SM00671 49 84 3.6E-6 T 11-11-2016 IPR006597 Sel1-like repeat SHALO_RS03820 f8b5b49dfbf27e1255420c19d7f2f1cd 132 Gene3D G3DSA:1.25.40.10 23 125 1.3E-13 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SHALO_RS03820 f8b5b49dfbf27e1255420c19d7f2f1cd 132 SUPERFAMILY SSF81901 26 113 7.59E-12 T 11-11-2016 SHALO_RS07735 02989ecb5e0bc74a1a36c3b272e24634 132 SUPERFAMILY SSF50475 4 119 6.02E-11 T 11-11-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 SHALO_RS07735 02989ecb5e0bc74a1a36c3b272e24634 132 Gene3D G3DSA:2.30.110.10 2 119 7.2E-13 T 11-11-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 SHALO_RS07735 02989ecb5e0bc74a1a36c3b272e24634 132 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 20 74 1.2E-5 T 11-11-2016 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 SHALO_RS13285 e2d22ad881a603c6e20d8e906cf2f05b 342 SUPERFAMILY SSF52540 4 221 2.45E-50 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS13285 e2d22ad881a603c6e20d8e906cf2f05b 342 SMART SM00382 27 211 4.5E-10 T 11-11-2016 IPR003593 AAA+ ATPase domain SHALO_RS13285 e2d22ad881a603c6e20d8e906cf2f05b 342 Gene3D G3DSA:3.40.50.300 4 220 3.0E-52 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS13285 e2d22ad881a603c6e20d8e906cf2f05b 342 SUPERFAMILY SSF50331 218 336 2.83E-7 T 11-11-2016 IPR008995 Molybdate/tungstate binding, C-terminal SHALO_RS13285 e2d22ad881a603c6e20d8e906cf2f05b 342 Pfam PF00005 ABC transporter 19 162 2.2E-28 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_RS05840 830f0405244e4676234f86bdae5530d4 350 SMART SM00897 20 190 3.1E-9 T 11-11-2016 IPR013702 FIST domain, N-terminal SHALO_RS05840 830f0405244e4676234f86bdae5530d4 350 Pfam PF08495 FIST N domain 41 189 3.9E-16 T 11-11-2016 IPR013702 FIST domain, N-terminal SHALO_RS05840 830f0405244e4676234f86bdae5530d4 350 SMART SM01204 191 333 1.2E-17 T 11-11-2016 IPR019494 FIST, C-domain SHALO_RS05840 830f0405244e4676234f86bdae5530d4 350 Pfam PF10442 FIST C domain 191 331 1.5E-18 T 11-11-2016 IPR019494 FIST, C-domain SHALO_RS11800 59ee6e51da57ade50eb62fe7025c5617 187 SUPERFAMILY SSF52218 1 174 3.56E-44 T 11-11-2016 IPR029039 Flavoprotein-like domain SHALO_RS11800 59ee6e51da57ade50eb62fe7025c5617 187 Pfam PF02525 Flavodoxin-like fold 2 170 2.4E-43 T 11-11-2016 IPR003680 Flavodoxin-like fold SHALO_RS11800 59ee6e51da57ade50eb62fe7025c5617 187 Gene3D G3DSA:3.40.50.360 1 174 2.9E-45 T 11-11-2016 IPR029039 Flavoprotein-like domain SHALO_RS13060 a14df162aece53629d3b592a08350f95 433 PIRSF PIRSF004539 1 433 5.6E-181 T 11-11-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 SHALO_RS13060 a14df162aece53629d3b592a08350f95 433 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 365 1.9E-150 T 11-11-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 SHALO_RS13060 a14df162aece53629d3b592a08350f95 433 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 5 433 2.0E-192 T 11-11-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 SHALO_RS07625 8a7ce55376949f4932a3dfb64d2d00a4 213 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 7 16 - T 11-11-2016 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 SHALO_RS07625 8a7ce55376949f4932a3dfb64d2d00a4 213 SUPERFAMILY SSF53254 1 196 1.84E-49 T 11-11-2016 IPR029033 Histidine phosphatase superfamily SHALO_RS07625 8a7ce55376949f4932a3dfb64d2d00a4 213 Gene3D G3DSA:3.40.50.1240 1 207 4.2E-51 T 11-11-2016 IPR029033 Histidine phosphatase superfamily SHALO_RS07625 8a7ce55376949f4932a3dfb64d2d00a4 213 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 5 191 1.5E-49 T 11-11-2016 IPR013078 Histidine phosphatase superfamily, clade-1 SHALO_RS07625 8a7ce55376949f4932a3dfb64d2d00a4 213 SMART SM00855 4 157 2.9E-11 T 11-11-2016 IPR013078 Histidine phosphatase superfamily, clade-1 SHALO_RS04185 b19d68dbfb3d68a35cfeb6f5f303fadd 567 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 435 561 2.2E-31 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SHALO_RS04185 b19d68dbfb3d68a35cfeb6f5f303fadd 567 Gene3D G3DSA:3.30.450.20 44 197 9.4E-49 T 11-11-2016 SHALO_RS04185 b19d68dbfb3d68a35cfeb6f5f303fadd 567 Gene3D G3DSA:1.10.287.950 389 565 2.1E-41 T 11-11-2016 SHALO_RS04185 b19d68dbfb3d68a35cfeb6f5f303fadd 567 SMART SM01049 45 144 3.6E-21 T 11-11-2016 IPR033480 Single Cache domain 2 SHALO_RS04185 b19d68dbfb3d68a35cfeb6f5f303fadd 567 SMART SM00283 375 567 6.2E-7 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SHALO_RS04185 b19d68dbfb3d68a35cfeb6f5f303fadd 567 Pfam PF08269 Cache domain 50 205 4.2E-41 T 11-11-2016 IPR004010 Double Cache domain 2 SHALO_RS04185 b19d68dbfb3d68a35cfeb6f5f303fadd 567 SUPERFAMILY SSF58104 363 565 1.83E-44 T 11-11-2016 SHALO_RS06855 e79c0f738e3227ebf202e00c96077b53 566 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 18 109 5.3E-12 T 11-11-2016 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 SHALO_RS06855 e79c0f738e3227ebf202e00c96077b53 566 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 477 550 8.5E-7 T 11-11-2016 IPR010809 Flagellar hook-associated 2, C-terminal GO:0007155|GO:0009288 SHALO_RS06855 e79c0f738e3227ebf202e00c96077b53 566 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 225 394 5.2E-39 T 11-11-2016 IPR010809 Flagellar hook-associated 2, C-terminal GO:0007155|GO:0009288 SHALO_RS11315 43ff5f7d661041f545d1aee4409ebfc8 182 SUPERFAMILY SSF52833 1 162 5.17E-37 T 11-11-2016 IPR012336 Thioredoxin-like fold SHALO_RS11315 43ff5f7d661041f545d1aee4409ebfc8 182 Gene3D G3DSA:3.40.30.10 3 168 3.0E-40 T 11-11-2016 IPR012336 Thioredoxin-like fold SHALO_RS11315 43ff5f7d661041f545d1aee4409ebfc8 182 Pfam PF08534 Redoxin 20 162 5.3E-19 T 11-11-2016 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 SHALO_RS11315 43ff5f7d661041f545d1aee4409ebfc8 182 ProSitePatterns PS01265 Tpx family signature. 83 94 - T 11-11-2016 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 SHALO_RS11315 43ff5f7d661041f545d1aee4409ebfc8 182 Hamap MF_00269 Probable thiol peroxidase [tpx]. 3 166 35.384 T 11-11-2016 IPR002065 Putative thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 SHALO_RS15095 0a2a101a20da745205abbfaa23335c55 305 Pfam PF01522 Polysaccharide deacetylase 59 182 4.3E-21 T 11-11-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 SHALO_RS15095 0a2a101a20da745205abbfaa23335c55 305 SUPERFAMILY SSF88713 18 201 1.06E-34 T 11-11-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 SHALO_RS15095 0a2a101a20da745205abbfaa23335c55 305 Gene3D G3DSA:3.20.20.370 34 249 3.7E-27 T 11-11-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 SHALO_RS12120 0540d3bc7ca442e40fe7125cb18e0cef 37 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 36 - T 11-11-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS12120 0540d3bc7ca442e40fe7125cb18e0cef 37 Pfam PF00444 Ribosomal protein L36 1 37 7.4E-19 T 11-11-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS12120 0540d3bc7ca442e40fe7125cb18e0cef 37 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 37 17.291 T 11-11-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS12120 0540d3bc7ca442e40fe7125cb18e0cef 37 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 37 1.0E-7 T 11-11-2016 SHALO_RS12120 0540d3bc7ca442e40fe7125cb18e0cef 37 SUPERFAMILY SSF57840 1 37 1.7E-16 T 11-11-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS12120 0540d3bc7ca442e40fe7125cb18e0cef 37 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 37 2.7E-23 T 11-11-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS00550 6a84e43fe839b9f111709ae601438477 321 Gene3D G3DSA:3.40.50.10490 7 193 3.8E-45 T 11-11-2016 SHALO_RS00550 6a84e43fe839b9f111709ae601438477 321 Pfam PF01380 SIS domain 37 168 9.2E-25 T 11-11-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 SHALO_RS00550 6a84e43fe839b9f111709ae601438477 321 Gene3D G3DSA:3.10.580.10 194 317 1.8E-27 T 11-11-2016 SHALO_RS00550 6a84e43fe839b9f111709ae601438477 321 Pfam PF00571 CBS domain 198 254 2.0E-7 T 11-11-2016 IPR000644 CBS domain SHALO_RS00550 6a84e43fe839b9f111709ae601438477 321 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 42 311 5.2E-104 T 11-11-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 SHALO_RS00550 6a84e43fe839b9f111709ae601438477 321 SUPERFAMILY SSF53697 5 274 1.29E-58 T 11-11-2016 SHALO_RS00550 6a84e43fe839b9f111709ae601438477 321 SMART SM00116 206 254 0.0043 T 11-11-2016 IPR000644 CBS domain SHALO_RS00550 6a84e43fe839b9f111709ae601438477 321 PIRSF PIRSF004692 1 321 2.0E-122 T 11-11-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 SHALO_RS01260 bc724d28898559e7bf985f304cbc13a6 164 SUPERFAMILY SSF50341 24 162 3.27E-35 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SHALO_RS01260 bc724d28898559e7bf985f304cbc13a6 164 SMART SM00260 24 160 2.3E-35 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SHALO_RS01260 bc724d28898559e7bf985f304cbc13a6 164 Pfam PF01584 CheW-like domain 28 162 1.7E-34 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 SHALO_RS01260 bc724d28898559e7bf985f304cbc13a6 164 Gene3D G3DSA:2.40.50.180 67 111 4.6E-10 T 11-11-2016 SHALO_RS05655 a28235dcd61d6553476f121e0f3ac190 328 Pfam PF06144 DNA polymerase III, delta subunit 21 182 1.8E-8 T 11-11-2016 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 SHALO_RS05655 a28235dcd61d6553476f121e0f3ac190 328 SUPERFAMILY SSF52540 14 199 2.44E-9 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS05655 a28235dcd61d6553476f121e0f3ac190 328 Gene3D G3DSA:1.10.8.60 140 217 1.3E-5 T 11-11-2016 SHALO_RS04905 a55689d3d4452880281158f232b4f412 531 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 394 423 4.2E-19 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SHALO_RS04905 a55689d3d4452880281158f232b4f412 531 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 4.2E-19 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SHALO_RS04905 a55689d3d4452880281158f232b4f412 531 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 365 392 4.2E-19 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SHALO_RS04905 a55689d3d4452880281158f232b4f412 531 SUPERFAMILY SSF58104 220 529 2.22E-49 T 11-11-2016 SHALO_RS04905 a55689d3d4452880281158f232b4f412 531 SMART SM00283 260 528 9.1E-25 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SHALO_RS04905 a55689d3d4452880281158f232b4f412 531 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 343 522 1.8E-31 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SHALO_RS04905 a55689d3d4452880281158f232b4f412 531 Gene3D G3DSA:1.10.287.950 283 490 1.9E-39 T 11-11-2016 SHALO_RS07610 835fa35022cfc02bf43f218e783aad03 343 Pfam PF02277 Phosphoribosyltransferase 11 337 2.3E-110 T 11-11-2016 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 SHALO_RS07610 835fa35022cfc02bf43f218e783aad03 343 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 16 339 7.4E-108 T 11-11-2016 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 SHALO_RS07610 835fa35022cfc02bf43f218e783aad03 343 Gene3D G3DSA:1.10.1610.10 1 69 2.7E-18 T 11-11-2016 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 SHALO_RS07610 835fa35022cfc02bf43f218e783aad03 343 SUPERFAMILY SSF52733 5 336 7.72E-97 T 11-11-2016 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 SHALO_RS07610 835fa35022cfc02bf43f218e783aad03 343 Gene3D G3DSA:3.40.50.10210 70 328 2.1E-101 T 11-11-2016 SHALO_RS09975 b64bf4d8c63d57ef20395c6f5e2bc20e 257 Pfam PF00929 Exonuclease 63 215 1.2E-28 T 11-11-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III SHALO_RS09975 b64bf4d8c63d57ef20395c6f5e2bc20e 257 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 60 241 1.2E-22 T 11-11-2016 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHALO_RS09975 b64bf4d8c63d57ef20395c6f5e2bc20e 257 SMART SM00479 60 224 1.1E-32 T 11-11-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III SHALO_RS09975 b64bf4d8c63d57ef20395c6f5e2bc20e 257 Gene3D G3DSA:3.30.420.10 53 224 1.8E-45 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SHALO_RS09975 b64bf4d8c63d57ef20395c6f5e2bc20e 257 SUPERFAMILY SSF53098 60 250 2.09E-46 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SHALO_RS04165 e400ed5333f9bf2ca9f0461ed607131e 466 SUPERFAMILY SSF56954 2 458 2.35E-101 T 11-11-2016 SHALO_RS04165 e400ed5333f9bf2ca9f0461ed607131e 466 Pfam PF02321 Outer membrane efflux protein 55 245 1.4E-17 T 11-11-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SHALO_RS04165 e400ed5333f9bf2ca9f0461ed607131e 466 Pfam PF02321 Outer membrane efflux protein 272 454 4.6E-31 T 11-11-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SHALO_RS04165 e400ed5333f9bf2ca9f0461ed607131e 466 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 12 456 6.5E-98 T 11-11-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 SHALO_RS04165 e400ed5333f9bf2ca9f0461ed607131e 466 Gene3D G3DSA:2.20.200.10 91 132 8.0E-21 T 11-11-2016 SHALO_RS04165 e400ed5333f9bf2ca9f0461ed607131e 466 Gene3D G3DSA:2.20.200.10 306 341 8.0E-21 T 11-11-2016 SHALO_RS04165 e400ed5333f9bf2ca9f0461ed607131e 466 Gene3D G3DSA:1.20.1600.10 43 81 1.0E-85 T 11-11-2016 SHALO_RS04165 e400ed5333f9bf2ca9f0461ed607131e 466 Gene3D G3DSA:1.20.1600.10 133 305 1.0E-85 T 11-11-2016 SHALO_RS04165 e400ed5333f9bf2ca9f0461ed607131e 466 Gene3D G3DSA:1.20.1600.10 343 457 1.0E-85 T 11-11-2016 SHALO_RS05300 cf915d77a279f800f25a45dd862a5fbf 317 SUPERFAMILY SSF53187 30 302 1.76E-15 T 11-11-2016 SHALO_RS05300 cf915d77a279f800f25a45dd862a5fbf 317 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 60 275 1.3E-15 T 11-11-2016 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 SHALO_RS10415 f47fc040491b6801c4c0bf43f62fd993 130 SUPERFAMILY SSF52833 27 124 2.11E-17 T 11-11-2016 IPR012336 Thioredoxin-like fold SHALO_RS10415 f47fc040491b6801c4c0bf43f62fd993 130 Pfam PF13899 Thioredoxin-like 24 99 1.4E-8 T 11-11-2016 SHALO_RS10415 f47fc040491b6801c4c0bf43f62fd993 130 Gene3D G3DSA:3.40.30.10 27 124 3.9E-14 T 11-11-2016 IPR012336 Thioredoxin-like fold SHALO_RS00570 afdd127c2b7934a31885c8164aa0878f 92 SUPERFAMILY SSF160544 9 86 2.62E-23 T 11-11-2016 IPR029025 Type III secretion system substrate exporter, C-terminal SHALO_RS00570 afdd127c2b7934a31885c8164aa0878f 92 Gene3D G3DSA:3.40.1690.10 9 86 3.0E-26 T 11-11-2016 IPR029025 Type III secretion system substrate exporter, C-terminal SHALO_RS00570 afdd127c2b7934a31885c8164aa0878f 92 Pfam PF01312 FlhB HrpN YscU SpaS Family 11 83 1.9E-19 T 11-11-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 SHALO_RS00440 7f11aa45db5793655a95575c0001ee33 212 Pfam PF01914 MarC family integral membrane protein 6 205 4.0E-45 T 11-11-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 SHALO_RS00440 7f11aa45db5793655a95575c0001ee33 212 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 5 204 1.0E-43 T 11-11-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 SHALO_RS13115 c00b8f411788c60e4eed89115597e2a5 225 Gene3D G3DSA:3.40.50.300 4 224 1.2E-57 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS13115 c00b8f411788c60e4eed89115597e2a5 225 SUPERFAMILY SSF52540 4 224 9.93E-55 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS13115 c00b8f411788c60e4eed89115597e2a5 225 Pfam PF00005 ABC transporter 24 173 2.8E-32 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_RS13115 c00b8f411788c60e4eed89115597e2a5 225 SMART SM00382 33 222 1.5E-12 T 11-11-2016 IPR003593 AAA+ ATPase domain SHALO_RS11485 a1b7b6b55d985011507e67ea131472b1 295 Gene3D G3DSA:3.90.550.10 1 269 8.5E-66 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases SHALO_RS11485 a1b7b6b55d985011507e67ea131472b1 295 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 2 287 2.9E-146 T 11-11-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 SHALO_RS11485 a1b7b6b55d985011507e67ea131472b1 295 SUPERFAMILY SSF53448 1 287 7.21E-90 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases SHALO_RS11485 a1b7b6b55d985011507e67ea131472b1 295 Pfam PF00483 Nucleotidyl transferase 2 241 1.2E-69 T 11-11-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 SHALO_RS01470 3c0c89ffef274863f176a65cfac970b8 152 SUPERFAMILY SSF53067 9 93 1.29E-12 T 11-11-2016 SHALO_RS01470 3c0c89ffef274863f176a65cfac970b8 152 Gene3D G3DSA:3.30.420.40 14 90 1.7E-6 T 11-11-2016 SHALO_RS13660 ee9b0bd5205a33f045d67a7c2457d7de 120 SUPERFAMILY SSF54637 3 114 4.47E-6 T 11-11-2016 IPR029069 HotDog domain SHALO_RS11085 83202e25ae0cff892e2db791a9e91d33 720 Pfam PF02516 Oligosaccharyl transferase STT3 subunit 40 480 8.7E-39 T 11-11-2016 IPR003674 Oligosaccharyl transferase, STT3 subunit GO:0004576|GO:0006486|GO:0016020 SHALO_RS10500 df036d0305813be0f29c1bf5b47b0552 295 SUPERFAMILY SSF51621 4 235 2.3E-59 T 11-11-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SHALO_RS10500 df036d0305813be0f29c1bf5b47b0552 295 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 7 225 6.0E-73 T 11-11-2016 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 SHALO_RS10500 df036d0305813be0f29c1bf5b47b0552 295 Gene3D G3DSA:3.20.20.60 2 237 3.6E-71 T 11-11-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SHALO_RS10500 df036d0305813be0f29c1bf5b47b0552 295 PIRSF PIRSF015582 1 295 3.3E-77 T 11-11-2016 IPR011206 Citrate lyase beta subunit-like SHALO_RS10050 8f64ce5e64118e84c9911d69ab3372e1 323 Pfam PF07549 SecD/SecF GG Motif 32 59 1.5E-10 T 11-11-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site SHALO_RS10050 8f64ce5e64118e84c9911d69ab3372e1 323 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 10 294 25.643 T 11-11-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 SHALO_RS10050 8f64ce5e64118e84c9911d69ab3372e1 323 Gene3D G3DSA:1.20.1640.10 132 291 4.1E-25 T 11-11-2016 SHALO_RS10050 8f64ce5e64118e84c9911d69ab3372e1 323 Gene3D G3DSA:1.20.1640.10 63 89 4.1E-25 T 11-11-2016 SHALO_RS10050 8f64ce5e64118e84c9911d69ab3372e1 323 SUPERFAMILY SSF82866 120 291 1.44E-36 T 11-11-2016 SHALO_RS10050 8f64ce5e64118e84c9911d69ab3372e1 323 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 116 280 1.5E-52 T 11-11-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial SHALO_RS10050 8f64ce5e64118e84c9911d69ab3372e1 323 Pfam PF02355 Protein export membrane protein 109 290 5.2E-64 T 11-11-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial SHALO_RS10050 8f64ce5e64118e84c9911d69ab3372e1 323 PRINTS PR01755 Bacterial translocase SecF protein signature 151 165 1.4E-28 T 11-11-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial SHALO_RS10050 8f64ce5e64118e84c9911d69ab3372e1 323 PRINTS PR01755 Bacterial translocase SecF protein signature 199 217 1.4E-28 T 11-11-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial SHALO_RS10050 8f64ce5e64118e84c9911d69ab3372e1 323 PRINTS PR01755 Bacterial translocase SecF protein signature 231 246 1.4E-28 T 11-11-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial SHALO_RS10050 8f64ce5e64118e84c9911d69ab3372e1 323 PRINTS PR01755 Bacterial translocase SecF protein signature 37 52 1.4E-28 T 11-11-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial SHALO_RS10050 8f64ce5e64118e84c9911d69ab3372e1 323 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 38 283 1.4E-80 T 11-11-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 SHALO_RS12640 1b1341cca29db071efd32875e659b379 74 Pfam PF04023 FeoA domain 1 72 1.7E-16 T 11-11-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 SHALO_RS12640 1b1341cca29db071efd32875e659b379 74 SUPERFAMILY SSF50037 4 73 3.66E-19 T 11-11-2016 IPR008988 Transcriptional repressor, C-terminal SHALO_RS12640 1b1341cca29db071efd32875e659b379 74 SMART SM00899 1 73 1.3E-19 T 11-11-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 SHALO_RS11365 85691baa596431a529d4c59c526e96da 319 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 28 300 1.5E-40 T 11-11-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 SHALO_RS10000 84b3074d40339be6304a62b9c818a6c8 75 Pfam PF04325 Protein of unknown function (DUF465) 19 65 1.3E-13 T 11-11-2016 IPR007420 Protein of unknown function DUF465 SHALO_RS08880 b31961815df1a53282a501683ab6b66f 237 Gene3D G3DSA:3.40.1130.10 72 210 7.9E-17 T 11-11-2016 SHALO_RS08880 b31961815df1a53282a501683ab6b66f 237 SMART SM00563 72 186 1.9E-29 T 11-11-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 SHALO_RS08880 b31961815df1a53282a501683ab6b66f 237 SUPERFAMILY SSF69593 19 229 2.48E-33 T 11-11-2016 SHALO_RS08880 b31961815df1a53282a501683ab6b66f 237 Pfam PF01553 Acyltransferase 70 183 1.8E-21 T 11-11-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 SHALO_RS08880 b31961815df1a53282a501683ab6b66f 237 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 58 183 2.3E-31 T 11-11-2016 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 SHALO_RS01430 1811af40479156cc71a30acde2c3aa92 208 SMART SM01207 13 200 7.4E-75 T 11-11-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 SHALO_RS01430 1811af40479156cc71a30acde2c3aa92 208 Pfam PF02660 Glycerol-3-phosphate acyltransferase 14 199 4.7E-45 T 11-11-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 SHALO_RS01430 1811af40479156cc71a30acde2c3aa92 208 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 10 208 19.017 T 11-11-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 SHALO_RS01430 1811af40479156cc71a30acde2c3aa92 208 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 6 207 3.7E-55 T 11-11-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 SHALO_RS11045 8f4cd077be88ca0da3eb7b7d6d0bac48 244 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 21 183 4.3E-47 T 11-11-2016 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 SHALO_RS11045 8f4cd077be88ca0da3eb7b7d6d0bac48 244 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 57 79 - T 11-11-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 SHALO_RS11045 8f4cd077be88ca0da3eb7b7d6d0bac48 244 Pfam PF01066 CDP-alcohol phosphatidyltransferase 16 79 3.4E-15 T 11-11-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 SHALO_RS07370 2746d2a4b2e2c429916b6c6f9058bf61 215 Gene3D G3DSA:3.30.70.60 122 203 1.2E-5 T 11-11-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 SHALO_RS13385 514210c9a50290a9ad3e06e9b357fc72 257 SUPERFAMILY SSF46785 3 106 1.16E-24 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS13385 514210c9a50290a9ad3e06e9b357fc72 257 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 20 82 6.6E-11 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SHALO_RS13385 514210c9a50290a9ad3e06e9b357fc72 257 Gene3D G3DSA:1.10.10.10 2 122 5.7E-44 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS13385 514210c9a50290a9ad3e06e9b357fc72 257 Pfam PF03459 TOBE domain 123 184 5.8E-11 T 11-11-2016 IPR005116 Transport-associated OB, type 1 SHALO_RS13385 514210c9a50290a9ad3e06e9b357fc72 257 Pfam PF03459 TOBE domain 195 255 1.6E-11 T 11-11-2016 IPR005116 Transport-associated OB, type 1 SHALO_RS13385 514210c9a50290a9ad3e06e9b357fc72 257 Gene3D G3DSA:2.40.50.100 193 257 4.9E-18 T 11-11-2016 SHALO_RS13385 514210c9a50290a9ad3e06e9b357fc72 257 Gene3D G3DSA:2.40.50.100 123 187 3.5E-22 T 11-11-2016 SHALO_RS13385 514210c9a50290a9ad3e06e9b357fc72 257 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 120 187 1.8E-18 T 11-11-2016 IPR004606 Molybdenum-pterin binding GO:0006810|GO:0030151 SHALO_RS13385 514210c9a50290a9ad3e06e9b357fc72 257 SUPERFAMILY SSF50331 171 255 2.92E-15 T 11-11-2016 IPR008995 Molybdate/tungstate binding, C-terminal SHALO_RS13385 514210c9a50290a9ad3e06e9b357fc72 257 SUPERFAMILY SSF50331 120 187 1.48E-16 T 11-11-2016 IPR008995 Molybdate/tungstate binding, C-terminal SHALO_RS13385 514210c9a50290a9ad3e06e9b357fc72 257 PIRSF PIRSF005763 1 257 7.6E-87 T 11-11-2016 IPR016462 Molybdate-dependent transcriptional regulator ModE GO:0006355|GO:0015689|GO:0030151 SHALO_RS03010 8f5573e1880540c66461ba5bd281a227 443 SUPERFAMILY SSF56821 5 437 2.14E-138 T 11-11-2016 IPR011254 Prismane-like GO:0003824|GO:0016491|GO:0055114 SHALO_RS03010 8f5573e1880540c66461ba5bd281a227 443 Gene3D G3DSA:3.40.50.2030 268 436 1.4E-61 T 11-11-2016 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 SHALO_RS03010 8f5573e1880540c66461ba5bd281a227 443 Hamap MF_00069 Hydroxylamine reductase [hcp]. 5 439 15.27 T 11-11-2016 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 SHALO_RS03010 8f5573e1880540c66461ba5bd281a227 443 Gene3D G3DSA:3.40.50.2030 122 267 1.0E-54 T 11-11-2016 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 SHALO_RS03010 8f5573e1880540c66461ba5bd281a227 443 Pfam PF03063 Prismane/CO dehydrogenase family 5 87 1.5E-13 T 11-11-2016 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 SHALO_RS03010 8f5573e1880540c66461ba5bd281a227 443 Pfam PF03063 Prismane/CO dehydrogenase family 63 423 3.1E-101 T 11-11-2016 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 SHALO_RS03010 8f5573e1880540c66461ba5bd281a227 443 Gene3D G3DSA:1.20.1270.20 35 118 3.8E-30 T 11-11-2016 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 SHALO_RS03010 8f5573e1880540c66461ba5bd281a227 443 TIGRFAM TIGR01703 hybrid_clust: hydroxylamine reductase 37 437 8.6E-149 T 11-11-2016 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 SHALO_RS14290 03b56d9742930448313dce31b40ecc4c 523 Gene3D G3DSA:1.10.3720.10 6 256 1.1E-26 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHALO_RS14290 03b56d9742930448313dce31b40ecc4c 523 Gene3D G3DSA:1.10.3720.10 310 521 3.4E-21 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHALO_RS14290 03b56d9742930448313dce31b40ecc4c 523 SUPERFAMILY SSF161098 282 515 2.62E-28 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHALO_RS14290 03b56d9742930448313dce31b40ecc4c 523 SUPERFAMILY SSF161098 7 252 1.2E-29 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHALO_RS14290 03b56d9742930448313dce31b40ecc4c 523 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 337 514 2.3E-10 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHALO_RS14290 03b56d9742930448313dce31b40ecc4c 523 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 67 252 2.7E-7 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHALO_RS01010 c41e2a90de2c04eb89d4b91a836c2954 289 TIGRFAM TIGR01475 ubiA_other: putative 4-hydroxybenzoate polyprenyltransferase 7 288 3.8E-94 T 11-11-2016 IPR006371 4-hydroxybenzoate polyprenyltransferase-related SHALO_RS01010 c41e2a90de2c04eb89d4b91a836c2954 289 Pfam PF01040 UbiA prenyltransferase family 24 272 5.8E-45 T 11-11-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 SHALO_RS02810 4899934273e9c6d6e14dd47f2a28beb5 249 PRINTS PR01805 VacJ lipoprotein signature 112 129 1.2E-20 T 11-11-2016 IPR007428 MlaA lipoprotein GO:0016020 SHALO_RS02810 4899934273e9c6d6e14dd47f2a28beb5 249 PRINTS PR01805 VacJ lipoprotein signature 61 77 1.2E-20 T 11-11-2016 IPR007428 MlaA lipoprotein GO:0016020 SHALO_RS02810 4899934273e9c6d6e14dd47f2a28beb5 249 PRINTS PR01805 VacJ lipoprotein signature 149 166 1.2E-20 T 11-11-2016 IPR007428 MlaA lipoprotein GO:0016020 SHALO_RS02810 4899934273e9c6d6e14dd47f2a28beb5 249 PRINTS PR01805 VacJ lipoprotein signature 44 57 1.2E-20 T 11-11-2016 IPR007428 MlaA lipoprotein GO:0016020 SHALO_RS02810 4899934273e9c6d6e14dd47f2a28beb5 249 Pfam PF04333 MlaA lipoprotein 44 244 9.1E-64 T 11-11-2016 IPR007428 MlaA lipoprotein GO:0016020 SHALO_RS08950 fe78ed99a10579d458cef0bf48b53206 175 Gene3D G3DSA:3.40.50.850 3 174 1.4E-39 T 11-11-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 SHALO_RS08950 fe78ed99a10579d458cef0bf48b53206 175 Pfam PF00857 Isochorismatase family 3 144 1.4E-33 T 11-11-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 SHALO_RS08950 fe78ed99a10579d458cef0bf48b53206 175 SUPERFAMILY SSF52499 3 157 1.1E-40 T 11-11-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 SHALO_RS10760 9f563d96495f8d864eeefe36f7671256 91 SUPERFAMILY SSF54285 27 78 9.45E-9 T 11-11-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp SHALO_RS10760 9f563d96495f8d864eeefe36f7671256 91 Pfam PF02597 ThiS family 24 80 1.8E-9 T 11-11-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 Reactome: R-HSA-947581 SHALO_RS10760 9f563d96495f8d864eeefe36f7671256 91 Gene3D G3DSA:3.10.20.30 5 76 6.4E-12 T 11-11-2016 IPR012675 Beta-grasp domain SHALO_RS05760 453bb56fcc4cc4c3e6bd9155dd2ef4b0 294 SMART SM00962 85 286 1.4E-103 T 11-11-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 SHALO_RS05760 453bb56fcc4cc4c3e6bd9155dd2ef4b0 294 Pfam PF00448 SRP54-type protein, GTPase domain 86 285 2.7E-73 T 11-11-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 SHALO_RS05760 453bb56fcc4cc4c3e6bd9155dd2ef4b0 294 SMART SM00382 84 267 1.4E-4 T 11-11-2016 IPR003593 AAA+ ATPase domain SHALO_RS05760 453bb56fcc4cc4c3e6bd9155dd2ef4b0 294 Gene3D G3DSA:3.40.50.300 81 286 1.1E-71 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS05760 453bb56fcc4cc4c3e6bd9155dd2ef4b0 294 SUPERFAMILY SSF52540 83 285 5.2E-48 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS05760 453bb56fcc4cc4c3e6bd9155dd2ef4b0 294 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 32 284 3.3E-93 T 11-11-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 SHALO_RS05760 453bb56fcc4cc4c3e6bd9155dd2ef4b0 294 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 23 286 53.79 T 11-11-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 SHALO_RS11110 55d014ab3e3551802e47fef3aebea02a 193 SUPERFAMILY SSF51161 23 177 3.74E-32 T 11-11-2016 IPR011004 Trimeric LpxA-like SHALO_RS11110 55d014ab3e3551802e47fef3aebea02a 193 Gene3D G3DSA:2.160.10.10 39 176 3.3E-31 T 11-11-2016 SHALO_RS11110 55d014ab3e3551802e47fef3aebea02a 193 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 62 97 0.098 T 11-11-2016 IPR001451 Hexapeptide repeat SHALO_RS11110 55d014ab3e3551802e47fef3aebea02a 193 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 120 152 8.0E-9 T 11-11-2016 IPR001451 Hexapeptide repeat SHALO_RS14625 ed4d047524d2ee93280b53cfe89390e4 354 Pfam PF04007 Protein of unknown function (DUF354) 2 334 4.9E-44 T 11-11-2016 IPR007152 Protein of unknown function DUF354 SHALO_RS14625 ed4d047524d2ee93280b53cfe89390e4 354 PIRSF PIRSF005357 1 348 1.6E-72 T 11-11-2016 IPR007152 Protein of unknown function DUF354 SHALO_RS14625 ed4d047524d2ee93280b53cfe89390e4 354 SUPERFAMILY SSF53756 98 329 7.63E-15 T 11-11-2016 SHALO_RS03270 abee4ae7d3f664f5eb8777962febdbc7 369 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 210 355 3.5E-49 T 11-11-2016 IPR008136 CinA, C-terminal SHALO_RS03270 abee4ae7d3f664f5eb8777962febdbc7 369 Pfam PF02464 Competence-damaged protein 209 356 2.1E-54 T 11-11-2016 IPR008136 CinA, C-terminal SHALO_RS03270 abee4ae7d3f664f5eb8777962febdbc7 369 SUPERFAMILY SSF142433 203 357 3.27E-51 T 11-11-2016 IPR008136 CinA, C-terminal SHALO_RS03270 abee4ae7d3f664f5eb8777962febdbc7 369 Gene3D G3DSA:3.90.950.20 205 357 2.7E-55 T 11-11-2016 IPR008136 CinA, C-terminal SHALO_RS13430 acc1294a0c4a76e67b5ac01504e5361c 270 Pfam PF02311 AraC-like ligand binding domain 24 87 4.4E-8 T 11-11-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 SHALO_RS13430 acc1294a0c4a76e67b5ac01504e5361c 270 Pfam PF12833 Helix-turn-helix domain 184 262 1.9E-17 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SHALO_RS13430 acc1294a0c4a76e67b5ac01504e5361c 270 SUPERFAMILY SSF46689 216 263 9.41E-12 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 SHALO_RS13430 acc1294a0c4a76e67b5ac01504e5361c 270 SMART SM00342 180 261 1.0E-12 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SHALO_RS13430 acc1294a0c4a76e67b5ac01504e5361c 270 SUPERFAMILY SSF51215 24 148 6.54E-15 T 11-11-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 SHALO_RS13430 acc1294a0c4a76e67b5ac01504e5361c 270 Gene3D G3DSA:2.60.120.280 24 152 2.8E-13 T 11-11-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 SHALO_RS13430 acc1294a0c4a76e67b5ac01504e5361c 270 Gene3D G3DSA:1.10.10.60 216 263 8.7E-16 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 SHALO_RS13430 acc1294a0c4a76e67b5ac01504e5361c 270 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 245 261 7.4E-6 T 11-11-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SHALO_RS13430 acc1294a0c4a76e67b5ac01504e5361c 270 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 230 245 7.4E-6 T 11-11-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SHALO_RS04330 936cd2a9a79d7e341a26dfb701874b2b 513 SUPERFAMILY SSF52540 281 468 2.22E-35 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS04330 936cd2a9a79d7e341a26dfb701874b2b 513 SUPERFAMILY SSF52540 2 187 2.22E-35 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS04330 936cd2a9a79d7e341a26dfb701874b2b 513 SMART SM00382 21 482 0.0014 T 11-11-2016 IPR003593 AAA+ ATPase domain SHALO_RS04330 936cd2a9a79d7e341a26dfb701874b2b 513 Gene3D G3DSA:3.40.50.300 376 465 1.0E-9 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS04330 936cd2a9a79d7e341a26dfb701874b2b 513 Gene3D G3DSA:3.40.50.300 2 194 1.6E-15 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS04330 936cd2a9a79d7e341a26dfb701874b2b 513 PIRSF PIRSF003128 1 513 7.8E-102 T 11-11-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 SHALO_RS04330 936cd2a9a79d7e341a26dfb701874b2b 513 Gene3D G3DSA:3.40.50.300 287 288 2.0E-4 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS04330 936cd2a9a79d7e341a26dfb701874b2b 513 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 468 1.9E-12 T 11-11-2016 IPR003395 RecF/RecN/SMC, N-terminal SHALO_RS09085 8d863b9f50c042d0994117d3fa541731 208 SUPERFAMILY SSF52833 41 204 3.18E-37 T 11-11-2016 IPR012336 Thioredoxin-like fold SHALO_RS09085 8d863b9f50c042d0994117d3fa541731 208 Gene3D G3DSA:3.40.30.10 40 203 2.7E-34 T 11-11-2016 IPR012336 Thioredoxin-like fold SHALO_RS09085 8d863b9f50c042d0994117d3fa541731 208 Pfam PF13462 Thioredoxin 46 192 2.6E-23 T 11-11-2016 IPR012336 Thioredoxin-like fold SHALO_RS09995 a44737af7add82397113c43bb1330afb 396 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 25 396 6.0E-116 T 11-11-2016 SHALO_RS09995 a44737af7add82397113c43bb1330afb 396 Gene3D G3DSA:3.60.70.12 9 267 1.5E-76 T 11-11-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 SHALO_RS09995 a44737af7add82397113c43bb1330afb 396 SUPERFAMILY SSF56266 14 393 5.89E-112 T 11-11-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 SHALO_RS09995 a44737af7add82397113c43bb1330afb 396 TIGRFAM TIGR00120 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase 12 396 9.9E-108 T 11-11-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 SHALO_RS09995 a44737af7add82397113c43bb1330afb 396 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 396 108.717 T 11-11-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 SHALO_RS09995 a44737af7add82397113c43bb1330afb 396 Pfam PF01960 ArgJ family 20 396 1.2E-120 T 11-11-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 SHALO_RS04525 0b95c67fe7d3f9f74f8d5c8ed05534a9 284 Pfam PF02754 Cysteine-rich domain 145 235 1.7E-15 T 11-11-2016 IPR004017 Cysteine-rich domain SHALO_RS04525 0b95c67fe7d3f9f74f8d5c8ed05534a9 284 Pfam PF02754 Cysteine-rich domain 6 87 1.2E-12 T 11-11-2016 IPR004017 Cysteine-rich domain SHALO_RS03870 f29aade300c3f14eeaae1ef082b24a78 683 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 1 668 14.239 T 11-11-2016 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 SHALO_RS03870 f29aade300c3f14eeaae1ef082b24a78 683 Pfam PF04453 Organic solvent tolerance protein 272 462 2.2E-6 T 11-11-2016 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 SHALO_RS05435 7b9a0b7361ff0851677901814a27fb77 247 Pfam PF02754 Cysteine-rich domain 4 83 4.2E-13 T 11-11-2016 IPR004017 Cysteine-rich domain SHALO_RS05435 7b9a0b7361ff0851677901814a27fb77 247 Pfam PF02754 Cysteine-rich domain 128 222 2.1E-10 T 11-11-2016 IPR004017 Cysteine-rich domain SHALO_RS07935 c37faa0d1eeeda82d390f53f415ec910 92 Gene3D G3DSA:1.10.287.110 8 71 1.9E-12 T 11-11-2016 IPR001623 DnaJ domain SHALO_RS07935 c37faa0d1eeeda82d390f53f415ec910 92 SMART SM00271 11 66 0.0013 T 11-11-2016 IPR001623 DnaJ domain SHALO_RS07935 c37faa0d1eeeda82d390f53f415ec910 92 Pfam PF00226 DnaJ domain 16 62 3.0E-8 T 11-11-2016 IPR001623 DnaJ domain SHALO_RS07935 c37faa0d1eeeda82d390f53f415ec910 92 SUPERFAMILY SSF46565 12 72 7.07E-11 T 11-11-2016 IPR001623 DnaJ domain SHALO_RS06710 c7aa5fc8511acf678079b3010a0e80bb 90 SUPERFAMILY SSF47413 24 89 2.82E-10 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SHALO_RS06710 c7aa5fc8511acf678079b3010a0e80bb 90 Gene3D G3DSA:1.10.260.40 22 90 2.8E-12 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SHALO_RS06710 c7aa5fc8511acf678079b3010a0e80bb 90 Pfam PF01381 Helix-turn-helix 32 88 6.2E-8 T 11-11-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SHALO_RS06710 c7aa5fc8511acf678079b3010a0e80bb 90 SMART SM00530 30 88 1.1E-6 T 11-11-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SHALO_RS14575 ecd668eaf7d407b477e83ee01acbd20a 260 Gene3D G3DSA:3.40.50.1820 48 253 1.7E-22 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold SHALO_RS14575 ecd668eaf7d407b477e83ee01acbd20a 260 Pfam PF00561 alpha/beta hydrolase fold 90 170 2.2E-7 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 SHALO_RS14575 ecd668eaf7d407b477e83ee01acbd20a 260 SUPERFAMILY SSF53474 30 248 1.51E-24 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold SHALO_RS14610 61db22e4e9908632ba2d20306fbe674d 157 TIGRFAM TIGR03585 PseH: UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase 7 141 1.7E-43 T 11-11-2016 IPR020036 UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase SHALO_RS14610 61db22e4e9908632ba2d20306fbe674d 157 SUPERFAMILY SSF55729 8 155 8.58E-26 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase SHALO_RS14610 61db22e4e9908632ba2d20306fbe674d 157 Pfam PF13302 Acetyltransferase (GNAT) domain 5 137 7.0E-17 T 11-11-2016 IPR000182 GNAT domain GO:0008080 SHALO_RS14610 61db22e4e9908632ba2d20306fbe674d 157 Gene3D G3DSA:3.40.630.30 13 143 1.1E-29 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase SHALO_RS05430 96749d10c6907f34ed35bffbe9b790c6 208 Pfam PF01810 LysE type translocator 17 205 1.1E-40 T 11-11-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 SHALO_RS05430 96749d10c6907f34ed35bffbe9b790c6 208 PIRSF PIRSF006324 1 208 9.7E-56 T 11-11-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 SHALO_RS09105 bbb4b688e00ea6a9e3782e16ef378b4f 291 Pfam PF00149 Calcineurin-like phosphoesterase 19 224 3.8E-17 T 11-11-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 SHALO_RS09105 bbb4b688e00ea6a9e3782e16ef378b4f 291 SUPERFAMILY SSF56300 19 224 2.58E-32 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like SHALO_RS09105 bbb4b688e00ea6a9e3782e16ef378b4f 291 Gene3D G3DSA:3.60.21.10 21 229 5.7E-26 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like SHALO_RS14260 b2979b1e1cdaa5c2f5af47e7277ff2c6 128 Pfam PF13115 YtkA-like 31 110 1.1E-20 T 11-11-2016 IPR032693 YtkA-like domain SHALO_RS10030 b743b19295381dc9c5c2e325cef4d9c4 384 Gene3D G3DSA:3.40.1190.10 4 252 1.0E-61 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 SHALO_RS10030 b743b19295381dc9c5c2e325cef4d9c4 384 Gene3D G3DSA:3.90.190.20 268 381 4.2E-20 T 11-11-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 SHALO_RS10030 b743b19295381dc9c5c2e325cef4d9c4 384 TIGRFAM TIGR01499 folC: bifunctional protein FolC 21 379 2.7E-81 T 11-11-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 SHALO_RS10030 b743b19295381dc9c5c2e325cef4d9c4 384 SUPERFAMILY SSF53244 268 380 7.33E-18 T 11-11-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 SHALO_RS10030 b743b19295381dc9c5c2e325cef4d9c4 384 SUPERFAMILY SSF53623 8 261 4.88E-56 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 SHALO_RS08665 39c730741e9c9e18a044ffb54d4729c9 260 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 113 258 2.0E-29 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS08665 39c730741e9c9e18a044ffb54d4729c9 260 SMART SM00267 101 260 1.8E-19 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS08665 39c730741e9c9e18a044ffb54d4729c9 260 Pfam PF00990 Diguanylate cyclase, GGDEF domain 113 258 3.7E-29 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS08665 39c730741e9c9e18a044ffb54d4729c9 260 Gene3D G3DSA:3.30.70.270 114 258 2.2E-34 T 11-11-2016 SHALO_RS08665 39c730741e9c9e18a044ffb54d4729c9 260 SUPERFAMILY SSF55073 117 258 1.41E-29 T 11-11-2016 IPR029787 Nucleotide cyclase SHALO_RS01545 2fd1bb368dddc6ce381ec998f9f2a31b 562 Gene3D G3DSA:3.80.30.20 21 248 7.4E-26 T 11-11-2016 IPR023404 Radical SAM, alpha/beta horseshoe SHALO_RS01545 2fd1bb368dddc6ce381ec998f9f2a31b 562 Pfam PF16199 Radical_SAM C-terminal domain 207 289 5.9E-19 T 11-11-2016 IPR032432 Radical SAM, C-terminal extension Reactome: R-HSA-3214847 SHALO_RS01545 2fd1bb368dddc6ce381ec998f9f2a31b 562 SUPERFAMILY SSF53335 339 493 1.42E-13 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS01545 2fd1bb368dddc6ce381ec998f9f2a31b 562 SUPERFAMILY SSF102114 24 253 3.01E-37 T 11-11-2016 SHALO_RS01545 2fd1bb368dddc6ce381ec998f9f2a31b 562 SMART SM00729 20 246 2.2E-33 T 11-11-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 SHALO_RS01545 2fd1bb368dddc6ce381ec998f9f2a31b 562 Pfam PF04055 Radical SAM superfamily 29 199 3.0E-13 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SHALO_RS01545 2fd1bb368dddc6ce381ec998f9f2a31b 562 Gene3D G3DSA:3.40.50.150 317 508 1.8E-30 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS01545 2fd1bb368dddc6ce381ec998f9f2a31b 562 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 6 299 1.7E-72 T 11-11-2016 IPR005911 Protein YhcC-like GO:0051536 SHALO_RS01545 2fd1bb368dddc6ce381ec998f9f2a31b 562 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 426 508 5.9E-10 T 11-11-2016 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 SHALO_RS12200 f86f3b90a24efe792e89dbbe47f09914 237 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 11-11-2016 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_RS12200 f86f3b90a24efe792e89dbbe47f09914 237 Gene3D G3DSA:3.30.300.20 17 105 2.1E-30 T 11-11-2016 IPR015946 K homology domain-like, alpha/beta SHALO_RS12200 f86f3b90a24efe792e89dbbe47f09914 237 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 208 3.6E-94 T 11-11-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 SHALO_RS12200 f86f3b90a24efe792e89dbbe47f09914 237 Pfam PF07650 KH domain 38 109 2.2E-19 T 11-11-2016 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_RS12200 f86f3b90a24efe792e89dbbe47f09914 237 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 38.662 T 11-11-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 SHALO_RS12200 f86f3b90a24efe792e89dbbe47f09914 237 Gene3D G3DSA:3.30.1140.32 109 207 2.7E-46 T 11-11-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_RS12200 f86f3b90a24efe792e89dbbe47f09914 237 SUPERFAMILY SSF54821 108 206 2.35E-40 T 11-11-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_RS12200 f86f3b90a24efe792e89dbbe47f09914 237 SMART SM00322 60 125 1.0E-5 T 11-11-2016 IPR004087 K Homology domain GO:0003676 SHALO_RS12200 f86f3b90a24efe792e89dbbe47f09914 237 SUPERFAMILY SSF54814 2 105 8.04E-36 T 11-11-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 SHALO_RS12200 f86f3b90a24efe792e89dbbe47f09914 237 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 1.5E-40 T 11-11-2016 SHALO_RS13870 b33c5ee6eb52ee11b32223e4ab701180 438 SUPERFAMILY SSF103473 4 381 1.09E-65 T 11-11-2016 IPR020846 Major facilitator superfamily domain SHALO_RS13870 b33c5ee6eb52ee11b32223e4ab701180 438 PRINTS PR01035 Tetracycline resistance protein signature 98 119 3.8E-5 T 11-11-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 SHALO_RS13870 b33c5ee6eb52ee11b32223e4ab701180 438 PRINTS PR01035 Tetracycline resistance protein signature 128 150 3.8E-5 T 11-11-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 SHALO_RS13870 b33c5ee6eb52ee11b32223e4ab701180 438 PRINTS PR01035 Tetracycline resistance protein signature 14 30 3.8E-5 T 11-11-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 SHALO_RS13870 b33c5ee6eb52ee11b32223e4ab701180 438 PRINTS PR01035 Tetracycline resistance protein signature 293 313 3.8E-5 T 11-11-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 SHALO_RS13870 b33c5ee6eb52ee11b32223e4ab701180 438 Gene3D G3DSA:1.20.1250.20 193 381 5.4E-29 T 11-11-2016 SHALO_RS13870 b33c5ee6eb52ee11b32223e4ab701180 438 Gene3D G3DSA:1.20.1250.20 3 182 7.7E-31 T 11-11-2016 SHALO_RS13870 b33c5ee6eb52ee11b32223e4ab701180 438 Pfam PF07690 Major Facilitator Superfamily 9 254 1.4E-33 T 11-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SHALO_RS04740 1895775185b3da36950f0b09358fd6ce 211 SUPERFAMILY SSF81452 15 210 2.62E-40 T 11-11-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_RS04740 1895775185b3da36950f0b09358fd6ce 211 Pfam PF00510 Cytochrome c oxidase subunit III 23 210 1.8E-6 T 11-11-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_RS04740 1895775185b3da36950f0b09358fd6ce 211 Gene3D G3DSA:1.20.120.80 20 210 3.0E-41 T 11-11-2016 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_RS04555 8c9bf122de75be04c1debfec391ad844 510 SUPERFAMILY SSF48695 48 489 7.62E-156 T 11-11-2016 IPR011031 Multihaem cytochrome SHALO_RS04555 8c9bf122de75be04c1debfec391ad844 510 Gene3D G3DSA:1.20.140.10 325 454 3.8E-45 T 11-11-2016 SHALO_RS04555 8c9bf122de75be04c1debfec391ad844 510 Pfam PF02335 Cytochrome c552 50 483 7.8E-175 T 11-11-2016 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 SHALO_RS04555 8c9bf122de75be04c1debfec391ad844 510 Hamap MF_01182 Cytochrome c-552 [nrfA]. 2 488 53.484 T 11-11-2016 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit GO:0005509|GO:0006807|GO:0020037|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 SHALO_RS04555 8c9bf122de75be04c1debfec391ad844 510 PIRSF PIRSF000243 1 491 3.4E-167 T 11-11-2016 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 SHALO_RS04555 8c9bf122de75be04c1debfec391ad844 510 Gene3D G3DSA:1.10.710.10 106 324 1.6E-16 T 11-11-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 SHALO_RS05500 94b0518ad698223a79148a934f135099 178 SUPERFAMILY SSF53474 5 170 8.56E-30 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold SHALO_RS05500 94b0518ad698223a79148a934f135099 178 Pfam PF06821 Serine hydrolase 5 173 2.8E-60 T 11-11-2016 IPR010662 Putative hydrolase RBBP9/YdeN GO:0016787 SHALO_RS05500 94b0518ad698223a79148a934f135099 178 Gene3D G3DSA:3.40.50.1820 3 174 1.5E-42 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold SHALO_RS07695 fbff03d05cce54c38866b96888fecaad 252 Pfam PF02571 Precorrin-6x reductase CbiJ/CobK 2 246 1.5E-68 T 11-11-2016 IPR003723 Precorrin-6x reductase GO:0009236|GO:0016994|GO:0055114 SHALO_RS07695 fbff03d05cce54c38866b96888fecaad 252 TIGRFAM TIGR00715 precor6x_red: precorrin-6x reductase 2 244 1.8E-59 T 11-11-2016 IPR003723 Precorrin-6x reductase GO:0009236|GO:0016994|GO:0055114 SHALO_RS14700 f7d1c201a5b693e4c735143efe975efc 630 Pfam PF01973 Protein of unknown function DUF115 206 377 1.4E-34 T 11-11-2016 IPR002826 6-hydroxymethylpterin diphosphokinase MptE-like SHALO_RS01945 c4aaa4955162930ff3ea0ea368a71a98 287 Gene3D G3DSA:2.30.330.10 200 287 2.2E-28 T 11-11-2016 SHALO_RS01945 c4aaa4955162930ff3ea0ea368a71a98 287 SUPERFAMILY SSF103039 49 123 1.96E-10 T 11-11-2016 IPR028976 CheC-like domain SHALO_RS01945 c4aaa4955162930ff3ea0ea368a71a98 287 PRINTS PR00956 Flagellar motor switch protein FliN signature 240 253 7.5E-18 T 11-11-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 SHALO_RS01945 c4aaa4955162930ff3ea0ea368a71a98 287 PRINTS PR00956 Flagellar motor switch protein FliN signature 224 240 7.5E-18 T 11-11-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 SHALO_RS01945 c4aaa4955162930ff3ea0ea368a71a98 287 PRINTS PR00956 Flagellar motor switch protein FliN signature 253 268 7.5E-18 T 11-11-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 SHALO_RS01945 c4aaa4955162930ff3ea0ea368a71a98 287 PRINTS PR00956 Flagellar motor switch protein FliN signature 207 223 7.5E-18 T 11-11-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 SHALO_RS01945 c4aaa4955162930ff3ea0ea368a71a98 287 SUPERFAMILY SSF101801 204 285 1.7E-20 T 11-11-2016 IPR001543 Surface presentation of antigen (SpoA) SHALO_RS01945 c4aaa4955162930ff3ea0ea368a71a98 287 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 204 279 6.1E-26 T 11-11-2016 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 SHALO_RS01945 c4aaa4955162930ff3ea0ea368a71a98 287 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 207 276 3.9E-20 T 11-11-2016 IPR001543 Surface presentation of antigen (SpoA) SHALO_RS01945 c4aaa4955162930ff3ea0ea368a71a98 287 Gene3D G3DSA:3.40.1550.10 36 115 2.8E-8 T 11-11-2016 IPR028976 CheC-like domain SHALO_RS01595 bd756985075d2d9c078b0357bdbcb208 393 Gene3D G3DSA:3.30.565.10 226 377 2.6E-28 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS01595 bd756985075d2d9c078b0357bdbcb208 393 Gene3D G3DSA:1.10.287.130 160 217 2.9E-6 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS01595 bd756985075d2d9c078b0357bdbcb208 393 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 274 376 1.2E-14 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS01595 bd756985075d2d9c078b0357bdbcb208 393 SUPERFAMILY SSF47384 158 223 2.55E-7 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS01595 bd756985075d2d9c078b0357bdbcb208 393 SUPERFAMILY SSF55874 222 373 1.7E-27 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS01595 bd756985075d2d9c078b0357bdbcb208 393 SMART SM00387 270 377 5.5E-17 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS09915 abe4be84135cd09b6e777b3ad4abe89d 267 Pfam PF03631 Virulence factor BrkB 18 259 6.7E-46 T 11-11-2016 IPR017039 Virulence factor BrkB SHALO_RS09915 abe4be84135cd09b6e777b3ad4abe89d 267 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 9 259 1.8E-50 T 11-11-2016 IPR017039 Virulence factor BrkB SHALO_RS09915 abe4be84135cd09b6e777b3ad4abe89d 267 PIRSF PIRSF035875 5 267 2.0E-44 T 11-11-2016 IPR017039 Virulence factor BrkB SHALO_RS00030 226e81b030e49c59eaec288371d8d73b 403 SUPERFAMILY SSF109604 9 164 6.59E-5 T 11-11-2016 SHALO_RS00030 226e81b030e49c59eaec288371d8d73b 403 Pfam PF13023 HD domain 194 371 3.3E-38 T 11-11-2016 IPR006674 HD domain SHALO_RS00030 226e81b030e49c59eaec288371d8d73b 403 Gene3D G3DSA:1.10.3210.10 179 287 4.6E-52 T 11-11-2016 IPR006674 HD domain SHALO_RS00030 226e81b030e49c59eaec288371d8d73b 403 Gene3D G3DSA:1.10.3210.10 332 378 4.6E-52 T 11-11-2016 IPR006674 HD domain SHALO_RS00030 226e81b030e49c59eaec288371d8d73b 403 SUPERFAMILY SSF109604 180 292 9.42E-31 T 11-11-2016 SHALO_RS00030 226e81b030e49c59eaec288371d8d73b 403 SUPERFAMILY SSF109604 333 378 9.42E-31 T 11-11-2016 SHALO_RS08970 95eccf38bedb13009d35f541bbb186b8 68 Pfam PF00403 Heavy-metal-associated domain 8 65 3.2E-17 T 11-11-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SHALO_RS08970 95eccf38bedb13009d35f541bbb186b8 68 SUPERFAMILY SSF55008 1 67 3.8E-19 T 11-11-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SHALO_RS08970 95eccf38bedb13009d35f541bbb186b8 68 PRINTS PR00944 Copper ion binding protein signature 3 15 5.7E-5 T 11-11-2016 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 SHALO_RS08970 95eccf38bedb13009d35f541bbb186b8 68 PRINTS PR00944 Copper ion binding protein signature 28 41 5.7E-5 T 11-11-2016 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 SHALO_RS08970 95eccf38bedb13009d35f541bbb186b8 68 PRINTS PR00944 Copper ion binding protein signature 53 66 5.7E-5 T 11-11-2016 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 SHALO_RS08970 95eccf38bedb13009d35f541bbb186b8 68 PRINTS PR00944 Copper ion binding protein signature 41 53 5.7E-5 T 11-11-2016 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 SHALO_RS08970 95eccf38bedb13009d35f541bbb186b8 68 ProSitePatterns PS01047 Heavy-metal-associated domain. 8 37 - T 11-11-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 SHALO_RS08970 95eccf38bedb13009d35f541bbb186b8 68 Gene3D G3DSA:3.30.70.100 3 66 5.6E-21 T 11-11-2016 SHALO_RS12830 f19803052a1430cea54e80fbf1af865f 168 SUPERFAMILY SSF160387 66 132 1.67E-7 T 11-11-2016 SHALO_RS10835 50cc6d7c3aa7f83e450587362b16bada 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 30 212 8.1E-14 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHALO_RS10835 50cc6d7c3aa7f83e450587362b16bada 225 Gene3D G3DSA:1.10.3720.10 7 221 1.3E-36 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHALO_RS10835 50cc6d7c3aa7f83e450587362b16bada 225 SUPERFAMILY SSF161098 7 219 6.67E-43 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHALO_RS10835 50cc6d7c3aa7f83e450587362b16bada 225 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 14 220 9.2E-57 T 11-11-2016 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 SHALO_RS06570 b06f1d9ef7f25379a40f91c6f9db3b4f 187 Gene3D G3DSA:3.40.50.10420 2 178 1.8E-34 T 11-11-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain SHALO_RS06570 b06f1d9ef7f25379a40f91c6f9db3b4f 187 Pfam PF02589 Uncharacterised ACR, YkgG family COG1556 4 177 4.5E-21 T 11-11-2016 IPR003741 LUD domain SHALO_RS06570 b06f1d9ef7f25379a40f91c6f9db3b4f 187 SUPERFAMILY SSF100950 15 178 4.18E-27 T 11-11-2016 SHALO_RS10960 62f842205b054ca86570351b0c92addf 315 Pfam PF09982 Uncharacterized protein conserved in bacteria (DUF2219) 25 312 7.3E-53 T 11-11-2016 IPR018707 Protein of unknown function DUF2219 SHALO_RS10960 62f842205b054ca86570351b0c92addf 315 Gene3D G3DSA:2.40.128.140 11 312 5.7E-55 T 11-11-2016 SHALO_RS10065 7add1cc51cadc79ad635cec18d3ec1fb 410 Pfam PF00795 Carbon-nitrogen hydrolase 222 392 5.0E-7 T 11-11-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 SHALO_RS10065 7add1cc51cadc79ad635cec18d3ec1fb 410 Gene3D G3DSA:3.60.110.10 214 404 7.5E-11 T 11-11-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 SHALO_RS10065 7add1cc51cadc79ad635cec18d3ec1fb 410 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 61 410 2.1E-53 T 11-11-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 SHALO_RS10065 7add1cc51cadc79ad635cec18d3ec1fb 410 SUPERFAMILY SSF56317 189 409 3.27E-21 T 11-11-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 SHALO_RS00745 fac27e580c276cb89c3f3a1e3ae66a63 317 Pfam PF02470 MlaD protein 46 115 1.4E-15 T 11-11-2016 IPR003399 Mce/MlaD SHALO_RS12115 45ea84ade327a2aa951031468d2d2b35 122 SUPERFAMILY SSF46946 2 115 2.69E-43 T 11-11-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 SHALO_RS12115 45ea84ade327a2aa951031468d2d2b35 122 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 120 27.607 T 11-11-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_RS12115 45ea84ade327a2aa951031468d2d2b35 122 Gene3D G3DSA:1.10.8.50 1 71 1.2E-29 T 11-11-2016 SHALO_RS12115 45ea84ade327a2aa951031468d2d2b35 122 Gene3D G3DSA:4.10.910.10 73 122 1.4E-25 T 11-11-2016 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_RS12115 45ea84ade327a2aa951031468d2d2b35 122 PIRSF PIRSF002134 1 122 5.0E-42 T 11-11-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_RS12115 45ea84ade327a2aa951031468d2d2b35 122 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 115 5.6E-53 T 11-11-2016 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_RS12115 45ea84ade327a2aa951031468d2d2b35 122 ProSitePatterns PS00646 Ribosomal protein S13 signature. 88 101 - T 11-11-2016 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_RS12115 45ea84ade327a2aa951031468d2d2b35 122 Pfam PF00416 Ribosomal protein S13/S18 3 109 7.8E-32 T 11-11-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_RS02770 906a6113c6a98cbc6613141dedc187df 674 SUPERFAMILY SSF52540 58 256 2.3E-30 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS02770 906a6113c6a98cbc6613141dedc187df 674 Gene3D G3DSA:3.40.50.300 153 253 1.9E-25 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS02770 906a6113c6a98cbc6613141dedc187df 674 Gene3D G3DSA:3.40.50.300 48 105 1.9E-25 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS02770 906a6113c6a98cbc6613141dedc187df 674 Pfam PF00350 Dynamin family 65 219 2.2E-27 T 11-11-2016 IPR022812 Dynamin superfamily SHALO_RS14335 6e5a15ada0054f1bfd6d5b22c3ff43ba 131 Gene3D G3DSA:3.40.140.10 1 130 7.4E-35 T 11-11-2016 SHALO_RS14335 6e5a15ada0054f1bfd6d5b22c3ff43ba 131 SMART SM00232 1 128 2.3E-16 T 11-11-2016 IPR000555 JAB1/MPN/MOV34 metalloenzyme domain GO:0005515 SHALO_RS14335 6e5a15ada0054f1bfd6d5b22c3ff43ba 131 SUPERFAMILY SSF102712 1 127 1.31E-30 T 11-11-2016 SHALO_RS14335 6e5a15ada0054f1bfd6d5b22c3ff43ba 131 Pfam PF14464 Prokaryotic homologs of the JAB domain 5 112 8.8E-26 T 11-11-2016 IPR028090 JAB domain, prokaryotic SHALO_RS02495 8978ad0748113539d5a1321d7ff84b3d 423 SUPERFAMILY SSF55469 268 422 2.75E-11 T 11-11-2016 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 SHALO_RS02495 8978ad0748113539d5a1321d7ff84b3d 423 Pfam PF00881 Nitroreductase family 274 422 1.2E-7 T 11-11-2016 IPR029479 Nitroreductase Reactome: R-HSA-209968 SHALO_RS02495 8978ad0748113539d5a1321d7ff84b3d 423 Gene3D G3DSA:3.40.109.10 268 422 1.1E-12 T 11-11-2016 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 SHALO_RS02495 8978ad0748113539d5a1321d7ff84b3d 423 TIGRFAM TIGR03605 antibiot_sagB: SagB-type dehydrogenase domain 52 206 1.0E-22 T 11-11-2016 IPR020051 SagB-type dehydrogenase domain SHALO_RS01270 29392e93e40dbb1879aeed21d0afe1bb 206 Gene3D G3DSA:1.10.150.210 14 64 1.0E-22 T 11-11-2016 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|Reactome: R-HSA-977347 SHALO_RS01270 29392e93e40dbb1879aeed21d0afe1bb 206 Pfam PF12710 haloacid dehalogenase-like hydrolase 5 172 9.5E-22 T 11-11-2016 SHALO_RS01270 29392e93e40dbb1879aeed21d0afe1bb 206 SUPERFAMILY SSF56784 1 206 2.04E-47 T 11-11-2016 IPR023214 HAD-like domain SHALO_RS01270 29392e93e40dbb1879aeed21d0afe1bb 206 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 3 172 5.8E-28 T 11-11-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 SHALO_RS01270 29392e93e40dbb1879aeed21d0afe1bb 206 Gene3D G3DSA:3.40.50.1000 65 202 2.8E-33 T 11-11-2016 IPR023214 HAD-like domain SHALO_RS01270 29392e93e40dbb1879aeed21d0afe1bb 206 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 2 206 1.1E-72 T 11-11-2016 SHALO_RS02610 b0f5ad868f3710bc3f4a00f7e2b5562e 120 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 1 120 16.422 T 11-11-2016 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 SHALO_RS02610 b0f5ad868f3710bc3f4a00f7e2b5562e 120 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 22 119 8.4E-32 T 11-11-2016 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS02560 04c32e806271c618fb82b04141f2b669 165 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 16 159 1.5E-34 T 11-11-2016 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS00160 61e729728f578ab5bb24e4a5208f7931 607 Pfam PF05935 Arylsulfotransferase (ASST) 45 596 6.6E-176 T 11-11-2016 IPR010262 Arylsulfotransferase SHALO_RS07120 0b54029f9f514897c8e64087fd67b6a9 113 Pfam PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA 1 112 5.7E-31 T 11-11-2016 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 SHALO_RS07120 0b54029f9f514897c8e64087fd67b6a9 113 TIGRFAM TIGR00100 hypA: hydrogenase nickel insertion protein HypA 1 113 8.3E-29 T 11-11-2016 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 SHALO_RS07120 0b54029f9f514897c8e64087fd67b6a9 113 Hamap MF_00213 Probable hydrogenase nickel incorporation protein HypA [hypA]. 1 113 22.669 T 11-11-2016 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 SHALO_RS07120 0b54029f9f514897c8e64087fd67b6a9 113 PIRSF PIRSF004761 1 113 5.5E-34 T 11-11-2016 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 SHALO_RS09900 ffe6198b0d4f89a5713d04316172c54a 390 Gene3D G3DSA:2.70.70.10 192 338 7.6E-45 T 11-11-2016 SHALO_RS09900 ffe6198b0d4f89a5713d04316172c54a 390 SUPERFAMILY SSF51261 89 335 8.89E-59 T 11-11-2016 IPR011055 Duplicated hybrid motif SHALO_RS09900 ffe6198b0d4f89a5713d04316172c54a 390 Pfam PF01551 Peptidase family M23 237 333 1.7E-30 T 11-11-2016 IPR016047 Peptidase M23 SHALO_RS05800 c3e000d55d7f92b4fed98af2f362f2df 301 Pfam PF01758 Sodium Bile acid symporter family 35 214 4.2E-43 T 11-11-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 SHALO_RS02840 de2f2b789809ee66dc8b23bc55546108 204 Gene3D G3DSA:3.30.63.10 45 84 2.7E-25 T 11-11-2016 SHALO_RS02840 de2f2b789809ee66dc8b23bc55546108 204 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 3 182 8.7E-67 T 11-11-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 SHALO_RS02840 de2f2b789809ee66dc8b23bc55546108 204 SUPERFAMILY SSF52540 2 188 8.04E-60 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS02840 de2f2b789809ee66dc8b23bc55546108 204 Hamap MF_00328 Guanylate kinase [gmk]. 1 185 34.136 T 11-11-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 SHALO_RS02840 de2f2b789809ee66dc8b23bc55546108 204 SMART SM00072 2 185 3.1E-59 T 11-11-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit SHALO_RS02840 de2f2b789809ee66dc8b23bc55546108 204 Gene3D G3DSA:3.40.50.300 85 188 9.7E-39 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS02840 de2f2b789809ee66dc8b23bc55546108 204 Gene3D G3DSA:3.40.50.300 2 15 9.7E-39 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS02840 de2f2b789809ee66dc8b23bc55546108 204 Pfam PF00625 Guanylate kinase 3 178 1.6E-45 T 11-11-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit SHALO_RS02840 de2f2b789809ee66dc8b23bc55546108 204 Gene3D G3DSA:3.40.50.300 16 44 6.1E-5 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS02840 de2f2b789809ee66dc8b23bc55546108 204 ProSitePatterns PS00856 Guanylate kinase-like signature. 37 54 - T 11-11-2016 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 SHALO_RS14975 cd8e8dc3b4d9e158b0da6c3ed94d910a 479 Pfam PF11853 Protein of unknown function (DUF3373) 1 479 2.7E-154 T 11-11-2016 IPR021803 Protein of unknown function DUF3373 SHALO_RS08255 a49f0fabb5665c0e2b810a6c9be6d5f0 166 SMART SM00855 3 117 7.0E-6 T 11-11-2016 IPR013078 Histidine phosphatase superfamily, clade-1 SHALO_RS08255 a49f0fabb5665c0e2b810a6c9be6d5f0 166 Gene3D G3DSA:3.40.50.1240 1 162 2.8E-44 T 11-11-2016 IPR029033 Histidine phosphatase superfamily SHALO_RS08255 a49f0fabb5665c0e2b810a6c9be6d5f0 166 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 102 1.3E-11 T 11-11-2016 IPR013078 Histidine phosphatase superfamily, clade-1 SHALO_RS08255 a49f0fabb5665c0e2b810a6c9be6d5f0 166 SUPERFAMILY SSF53254 1 161 6.0E-28 T 11-11-2016 IPR029033 Histidine phosphatase superfamily SHALO_RS08590 68bcf5f76fef103c516094cf2e732af7 234 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 1 227 7.5E-78 T 11-11-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 SHALO_RS08590 68bcf5f76fef103c516094cf2e732af7 234 Gene3D G3DSA:3.90.550.10 2 234 1.3E-61 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases SHALO_RS08590 68bcf5f76fef103c516094cf2e732af7 234 SUPERFAMILY SSF53448 2 233 1.64E-52 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases SHALO_RS08590 68bcf5f76fef103c516094cf2e732af7 234 Pfam PF02348 Cytidylyltransferase 1 208 1.3E-48 T 11-11-2016 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 SHALO_RS08590 68bcf5f76fef103c516094cf2e732af7 234 Hamap MF_00057 3-deoxy-manno-octulosonate cytidylyltransferase [kdsB]. 1 234 33.322 T 11-11-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 SHALO_RS14000 6e2dfa6cd4195062c68db5cb3ea71685 103 SUPERFAMILY SSF46689 5 84 1.16E-10 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 SHALO_RS14000 6e2dfa6cd4195062c68db5cb3ea71685 103 Pfam PF01527 Transposase 3 77 2.2E-8 T 11-11-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SHALO_RS14000 6e2dfa6cd4195062c68db5cb3ea71685 103 Gene3D G3DSA:1.10.10.60 10 84 4.2E-10 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 SHALO_RS12240 ffc41e2ce4776db6cffa0a4e91d6932d 357 Gene3D G3DSA:3.40.190.10 114 190 7.0E-4 T 11-11-2016 SHALO_RS08610 c2e5993e8b0ffdb2d39c8a0c5e16f7f7 266 Gene3D G3DSA:3.40.50.300 6 250 5.2E-99 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS08610 c2e5993e8b0ffdb2d39c8a0c5e16f7f7 266 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 6 232 2.9E-111 T 11-11-2016 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 SHALO_RS08610 c2e5993e8b0ffdb2d39c8a0c5e16f7f7 266 PIRSF PIRSF028756 2 260 3.2E-113 T 11-11-2016 IPR016898 Polyphosphate kinase 2 SHALO_RS08610 c2e5993e8b0ffdb2d39c8a0c5e16f7f7 266 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 6 231 2.2E-100 T 11-11-2016 IPR022488 Polyphosphate kinase-2-related SHALO_RS08610 c2e5993e8b0ffdb2d39c8a0c5e16f7f7 266 SUPERFAMILY SSF52540 36 224 6.53E-28 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS00895 50ed8c9eb5b9a5df93e613d44bcec246 123 Pfam PF01475 Ferric uptake regulator family 13 99 8.2E-16 T 11-11-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 SHALO_RS00895 50ed8c9eb5b9a5df93e613d44bcec246 123 SUPERFAMILY SSF46785 4 119 2.11E-22 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS00895 50ed8c9eb5b9a5df93e613d44bcec246 123 Gene3D G3DSA:1.10.10.10 3 79 4.6E-13 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS00960 7e99054489c2adca959b3ef41481a724 330 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 6 330 22.602 T 11-11-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS00960 7e99054489c2adca959b3ef41481a724 330 Pfam PF00146 NADH dehydrogenase 13 325 6.4E-109 T 11-11-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS00960 7e99054489c2adca959b3ef41481a724 330 ProSitePatterns PS00667 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. 52 67 - T 11-11-2016 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS13120 1c077aa860e9e6fb87a6c79129dad510 370 Pfam PF02687 FtsX-like permease family 236 360 4.6E-13 T 11-11-2016 IPR003838 ABC transporter permease protein domain GO:0016020 SHALO_RS07500 f05bb81cb24813dd13e73155f1fadd75 212 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 10 176 1.4E-41 T 11-11-2016 IPR005126 NapC/NirT cytochrome c, N-terminal SHALO_RS07500 f05bb81cb24813dd13e73155f1fadd75 212 Gene3D G3DSA:1.10.3820.10 10 175 1.4E-22 T 11-11-2016 SHALO_RS07500 f05bb81cb24813dd13e73155f1fadd75 212 PIRSF PIRSF000013 3 187 4.6E-19 T 11-11-2016 IPR024717 Denitrification system component NapC/NirT/NrfH GO:0016021|GO:0019333|GO:0020037 SHALO_RS07500 f05bb81cb24813dd13e73155f1fadd75 212 SUPERFAMILY SSF48695 11 174 7.92E-24 T 11-11-2016 IPR011031 Multihaem cytochrome SHALO_RS09530 ff31ea785f35fa2e52f92b628fedbe01 381 Pfam PF03486 HI0933-like protein 5 373 2.3E-100 T 11-11-2016 SHALO_RS09530 ff31ea785f35fa2e52f92b628fedbe01 381 Gene3D G3DSA:3.50.50.60 325 374 5.0E-30 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHALO_RS09530 ff31ea785f35fa2e52f92b628fedbe01 381 Gene3D G3DSA:3.50.50.60 5 181 5.0E-30 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHALO_RS09530 ff31ea785f35fa2e52f92b628fedbe01 381 SUPERFAMILY SSF160996 183 325 2.75E-27 T 11-11-2016 SHALO_RS09530 ff31ea785f35fa2e52f92b628fedbe01 381 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 7 373 1.7E-100 T 11-11-2016 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like SHALO_RS09530 ff31ea785f35fa2e52f92b628fedbe01 381 SUPERFAMILY SSF51905 4 182 7.24E-33 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHALO_RS09530 ff31ea785f35fa2e52f92b628fedbe01 381 SUPERFAMILY SSF51905 322 374 7.24E-33 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHALO_RS09530 ff31ea785f35fa2e52f92b628fedbe01 381 Gene3D G3DSA:2.40.30.10 182 265 6.1E-22 T 11-11-2016 SHALO_RS12330 6ea879ab8b5b2d59066f9bd1370f51fa 327 Pfam PF00764 Arginosuccinate synthase 6 73 2.8E-8 T 11-11-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 SHALO_RS12330 6ea879ab8b5b2d59066f9bd1370f51fa 327 SUPERFAMILY SSF52402 1 232 1.61E-29 T 11-11-2016 SHALO_RS12330 6ea879ab8b5b2d59066f9bd1370f51fa 327 Gene3D G3DSA:3.40.50.620 1 192 4.1E-33 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHALO_RS03410 34ceb536278a9de0cc9f731d3527127e 285 Pfam PF02195 ParB-like nuclease domain 36 123 3.2E-23 T 11-11-2016 IPR003115 ParB/Sulfiredoxin SHALO_RS03410 34ceb536278a9de0cc9f731d3527127e 285 SUPERFAMILY SSF110849 36 169 1.73E-32 T 11-11-2016 IPR003115 ParB/Sulfiredoxin SHALO_RS03410 34ceb536278a9de0cc9f731d3527127e 285 Gene3D G3DSA:3.90.1530.10 28 129 1.9E-36 T 11-11-2016 SHALO_RS03410 34ceb536278a9de0cc9f731d3527127e 285 SMART SM00470 34 123 7.9E-30 T 11-11-2016 IPR003115 ParB/Sulfiredoxin SHALO_RS03410 34ceb536278a9de0cc9f731d3527127e 285 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 34 205 2.0E-54 T 11-11-2016 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 SHALO_RS05000 448ba4400ca0174058114d0ecb1fa39f 194 Gene3D G3DSA:3.40.50.360 1 194 9.9E-58 T 11-11-2016 IPR029039 Flavoprotein-like domain SHALO_RS05000 448ba4400ca0174058114d0ecb1fa39f 194 Pfam PF02525 Flavodoxin-like fold 1 184 1.1E-49 T 11-11-2016 IPR003680 Flavodoxin-like fold SHALO_RS05000 448ba4400ca0174058114d0ecb1fa39f 194 SUPERFAMILY SSF52218 1 194 4.01E-57 T 11-11-2016 IPR029039 Flavoprotein-like domain SHALO_RS11965 54562762acb884cdbfd2938a9ee3c223 70 Pfam PF13179 Family of unknown function (DUF4006) 1 65 1.7E-31 T 11-11-2016 IPR025065 Protein of unknown function DUF4006 SHALO_RS11780 d6a871761213e76bada8d915d6971af1 180 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 4 177 3.1E-33 T 11-11-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein Reactome: R-HSA-1474151 SHALO_RS11780 d6a871761213e76bada8d915d6971af1 180 Gene3D G3DSA:3.30.479.10 1 177 4.7E-32 T 11-11-2016 SHALO_RS11780 d6a871761213e76bada8d915d6971af1 180 SUPERFAMILY SSF55620 1 85 2.67E-23 T 11-11-2016 SHALO_RS11780 d6a871761213e76bada8d915d6971af1 180 SUPERFAMILY SSF55620 131 177 2.67E-23 T 11-11-2016 SHALO_RS12275 5666646b754c2ba8fe56f2c91f75e71f 387 Pfam PF02687 FtsX-like permease family 266 378 5.4E-17 T 11-11-2016 IPR003838 ABC transporter permease protein domain GO:0016020 SHALO_RS01530 536d389e1d21c896b50048ab9896034f 328 Pfam PF14827 Double sensory domain of two-component sensor kinase 51 214 7.7E-14 T 11-11-2016 IPR029150 Double Cache domain 3 SHALO_RS01530 536d389e1d21c896b50048ab9896034f 328 SUPERFAMILY SSF103190 62 196 4.71E-6 T 11-11-2016 IPR029151 Periplasmic sensor domain-like SHALO_RS00725 ffe42441e0420b451d6593baa68931ad 395 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 296 393 8.5E-15 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS00725 ffe42441e0420b451d6593baa68931ad 395 Pfam PF00512 His Kinase A (phospho-acceptor) domain 188 244 2.1E-7 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS00725 ffe42441e0420b451d6593baa68931ad 395 Gene3D G3DSA:1.10.287.130 182 243 6.8E-5 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS00725 ffe42441e0420b451d6593baa68931ad 395 SUPERFAMILY SSF55874 251 394 4.45E-27 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS00725 ffe42441e0420b451d6593baa68931ad 395 SUPERFAMILY SSF47384 177 246 4.9E-9 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS00725 ffe42441e0420b451d6593baa68931ad 395 SMART SM00387 295 395 2.8E-17 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS00725 ffe42441e0420b451d6593baa68931ad 395 Gene3D G3DSA:3.30.565.10 257 394 5.0E-27 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS00725 ffe42441e0420b451d6593baa68931ad 395 SMART SM00388 187 252 1.0E-4 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS09805 962e8ec8b478002a1573594f1107dffe 205 SUPERFAMILY SSF54909 106 204 4.56E-14 T 11-11-2016 IPR011008 Dimeric alpha-beta barrel SHALO_RS09805 962e8ec8b478002a1573594f1107dffe 205 Gene3D G3DSA:3.30.70.900 101 204 6.0E-11 T 11-11-2016 SHALO_RS09805 962e8ec8b478002a1573594f1107dffe 205 Gene3D G3DSA:3.30.70.900 1 74 4.5E-4 T 11-11-2016 SHALO_RS09805 962e8ec8b478002a1573594f1107dffe 205 Pfam PF07978 NIPSNAP 109 203 5.4E-10 T 11-11-2016 IPR012577 NIPSNAP SHALO_RS09805 962e8ec8b478002a1573594f1107dffe 205 SUPERFAMILY SSF54909 1 99 3.49E-9 T 11-11-2016 IPR011008 Dimeric alpha-beta barrel SHALO_RS04425 f14ca3b1b3272b3833a9a836f8f15bbd 278 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 3 148 9.3E-28 T 11-11-2016 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 SHALO_RS04425 f14ca3b1b3272b3833a9a836f8f15bbd 278 Gene3D G3DSA:3.30.540.10 1 148 8.5E-34 T 11-11-2016 SHALO_RS04425 f14ca3b1b3272b3833a9a836f8f15bbd 278 PRINTS PR01958 Sedoheptulose-1,7-bisphosphatase family signature 250 274 5.5E-18 T 11-11-2016 IPR023079 Sedoheptulose-1,7-bisphosphatase GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 SHALO_RS04425 f14ca3b1b3272b3833a9a836f8f15bbd 278 PRINTS PR01958 Sedoheptulose-1,7-bisphosphatase family signature 187 207 5.5E-18 T 11-11-2016 IPR023079 Sedoheptulose-1,7-bisphosphatase GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 SHALO_RS04425 f14ca3b1b3272b3833a9a836f8f15bbd 278 PRINTS PR01958 Sedoheptulose-1,7-bisphosphatase family signature 107 125 5.5E-18 T 11-11-2016 IPR023079 Sedoheptulose-1,7-bisphosphatase GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 SHALO_RS04425 f14ca3b1b3272b3833a9a836f8f15bbd 278 PRINTS PR01958 Sedoheptulose-1,7-bisphosphatase family signature 37 52 5.5E-18 T 11-11-2016 IPR023079 Sedoheptulose-1,7-bisphosphatase GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 SHALO_RS04425 f14ca3b1b3272b3833a9a836f8f15bbd 278 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 1 278 28.731 T 11-11-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 SHALO_RS04425 f14ca3b1b3272b3833a9a836f8f15bbd 278 SUPERFAMILY SSF56655 2 277 2.75E-67 T 11-11-2016 SHALO_RS04425 f14ca3b1b3272b3833a9a836f8f15bbd 278 Gene3D G3DSA:3.40.190.80 152 277 2.6E-40 T 11-11-2016 SHALO_RS04425 f14ca3b1b3272b3833a9a836f8f15bbd 278 PIRSF PIRSF000904 1 278 2.5E-86 T 11-11-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 SHALO_RS04425 f14ca3b1b3272b3833a9a836f8f15bbd 278 PIRSF PIRSF500210 1 278 3.9E-85 T 11-11-2016 IPR028343 Fructose-1,6-bisphosphatase GO:0006001|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 SHALO_RS11980 9577fab97a9c9d59f0e32c05e4158ab5 221 Gene3D G3DSA:1.10.760.10 16 152 4.8E-22 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS11980 9577fab97a9c9d59f0e32c05e4158ab5 221 Gene3D G3DSA:1.10.760.10 195 221 4.8E-22 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS11980 9577fab97a9c9d59f0e32c05e4158ab5 221 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 3 220 1.9E-88 T 11-11-2016 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO SHALO_RS11980 9577fab97a9c9d59f0e32c05e4158ab5 221 SUPERFAMILY SSF46626 15 151 2.47E-20 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS11980 9577fab97a9c9d59f0e32c05e4158ab5 221 SUPERFAMILY SSF46626 209 221 2.47E-20 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS11980 9577fab97a9c9d59f0e32c05e4158ab5 221 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 3 220 4.6E-85 T 11-11-2016 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO SHALO_RS13190 9adce376286471b2bc945c3abb64a575 176 SUPERFAMILY SSF52218 1 176 3.35E-43 T 11-11-2016 IPR029039 Flavoprotein-like domain SHALO_RS13190 9adce376286471b2bc945c3abb64a575 176 Pfam PF02525 Flavodoxin-like fold 2 171 8.9E-40 T 11-11-2016 IPR003680 Flavodoxin-like fold SHALO_RS13190 9adce376286471b2bc945c3abb64a575 176 Gene3D G3DSA:3.40.50.360 1 176 2.7E-41 T 11-11-2016 IPR029039 Flavoprotein-like domain SHALO_RS01890 0e5a1b9afe7b02988f99a31bde1e730a 283 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 13 220 3.3E-59 T 11-11-2016 IPR003740 Uncharacterised membrane protein YitT SHALO_RS01890 0e5a1b9afe7b02988f99a31bde1e730a 283 PIRSF PIRSF006483 2 283 3.0E-67 T 11-11-2016 IPR003740 Uncharacterised membrane protein YitT SHALO_RS01890 0e5a1b9afe7b02988f99a31bde1e730a 283 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 229 281 4.2E-11 T 11-11-2016 IPR019264 Domain of unknown function DUF2179 SHALO_RS02580 63db493e68fa0d43e1fb1c7be0abd0ef 501 Pfam PF00361 Proton-conducting membrane transporter 127 426 7.3E-62 T 11-11-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS02580 63db493e68fa0d43e1fb1c7be0abd0ef 501 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 8 473 1.3E-102 T 11-11-2016 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 SHALO_RS02580 63db493e68fa0d43e1fb1c7be0abd0ef 501 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 4 479 16.109 T 11-11-2016 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 SHALO_RS11210 29724fa9ef4900630cdc70f16a24e76a 287 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 2 287 1.7E-152 T 11-11-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 SHALO_RS11210 29724fa9ef4900630cdc70f16a24e76a 287 Pfam PF00483 Nucleotidyl transferase 2 237 2.4E-69 T 11-11-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 SHALO_RS11210 29724fa9ef4900630cdc70f16a24e76a 287 SUPERFAMILY SSF53448 1 286 1.55E-94 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases SHALO_RS11210 29724fa9ef4900630cdc70f16a24e76a 287 Gene3D G3DSA:3.90.550.10 1 267 5.9E-67 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases SHALO_RS00990 600d39586509ae7dd5795d3eb4a56ef0 495 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 16 480 1.4E-115 T 11-11-2016 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 SHALO_RS00990 600d39586509ae7dd5795d3eb4a56ef0 495 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 12 483 15.544 T 11-11-2016 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 SHALO_RS00990 600d39586509ae7dd5795d3eb4a56ef0 495 Pfam PF00361 Proton-conducting membrane transporter 129 427 4.3E-58 T 11-11-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS02480 19dc3c88d69e188ac03083b6c752c82f 150 Gene3D G3DSA:3.30.70.920 54 145 8.7E-15 T 11-11-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain SHALO_RS02480 19dc3c88d69e188ac03083b6c752c82f 150 Pfam PF01037 Lrp/AsnC ligand binding domain 69 141 3.4E-10 T 11-11-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain SHALO_RS02480 19dc3c88d69e188ac03083b6c752c82f 150 SMART SM00344 1 111 3.9E-28 T 11-11-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 SHALO_RS02480 19dc3c88d69e188ac03083b6c752c82f 150 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 48 1.7E-14 T 11-11-2016 SHALO_RS02480 19dc3c88d69e188ac03083b6c752c82f 150 Gene3D G3DSA:1.10.10.10 1 52 8.8E-21 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS02480 19dc3c88d69e188ac03083b6c752c82f 150 SUPERFAMILY SSF46785 1 59 1.42E-15 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS02480 19dc3c88d69e188ac03083b6c752c82f 150 SUPERFAMILY SSF54909 63 146 1.14E-12 T 11-11-2016 IPR011008 Dimeric alpha-beta barrel SHALO_RS02480 19dc3c88d69e188ac03083b6c752c82f 150 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 2.5E-11 T 11-11-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 SHALO_RS02480 19dc3c88d69e188ac03083b6c752c82f 150 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 2.5E-11 T 11-11-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 SHALO_RS02480 19dc3c88d69e188ac03083b6c752c82f 150 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 2.5E-11 T 11-11-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 SHALO_RS12700 32dca8c74b71ba3eda055e26a0b218dd 392 SUPERFAMILY SSF103473 6 382 1.96E-48 T 11-11-2016 IPR020846 Major facilitator superfamily domain SHALO_RS12700 32dca8c74b71ba3eda055e26a0b218dd 392 Pfam PF07690 Major Facilitator Superfamily 11 352 2.9E-35 T 11-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SHALO_RS12700 32dca8c74b71ba3eda055e26a0b218dd 392 Gene3D G3DSA:1.20.1250.20 208 384 2.9E-14 T 11-11-2016 SHALO_RS12700 32dca8c74b71ba3eda055e26a0b218dd 392 Gene3D G3DSA:1.20.1250.20 5 200 1.1E-29 T 11-11-2016 SHALO_RS12700 32dca8c74b71ba3eda055e26a0b218dd 392 PRINTS PR01035 Tetracycline resistance protein signature 336 359 4.3E-10 T 11-11-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 SHALO_RS12700 32dca8c74b71ba3eda055e26a0b218dd 392 PRINTS PR01035 Tetracycline resistance protein signature 301 321 4.3E-10 T 11-11-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 SHALO_RS12700 32dca8c74b71ba3eda055e26a0b218dd 392 PRINTS PR01035 Tetracycline resistance protein signature 39 58 4.3E-10 T 11-11-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 SHALO_RS12700 32dca8c74b71ba3eda055e26a0b218dd 392 PRINTS PR01035 Tetracycline resistance protein signature 70 94 4.3E-10 T 11-11-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 SHALO_RS12700 32dca8c74b71ba3eda055e26a0b218dd 392 PRINTS PR01035 Tetracycline resistance protein signature 249 269 4.3E-10 T 11-11-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 SHALO_RS14455 b3d609fbf8a096e755430bf4ef5f0ec2 412 Pfam PF12704 MacB-like periplasmic core domain 19 243 2.2E-9 T 11-11-2016 IPR025857 MacB-like periplasmic core domain SHALO_RS14455 b3d609fbf8a096e755430bf4ef5f0ec2 412 Pfam PF02687 FtsX-like permease family 284 405 6.9E-13 T 11-11-2016 IPR003838 ABC transporter permease protein domain GO:0016020 SHALO_RS06660 cb690a6357220d49d81ab8ab69fa398d 394 Pfam PF00999 Sodium/hydrogen exchanger family 12 381 2.6E-38 T 11-11-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 SHALO_RS14210 cf5cedc3d76a77a3605553a27ea08849 190 SMART SM01144 1 170 1.3E-5 T 11-11-2016 IPR005636 DTW SHALO_RS14210 cf5cedc3d76a77a3605553a27ea08849 190 Pfam PF03942 DTW domain 1 165 1.1E-30 T 11-11-2016 IPR005636 DTW SHALO_RS01050 35eb872a32ae204ca7114da17fb3b6fc 222 SUPERFAMILY SSF75217 76 221 1.5E-29 T 11-11-2016 IPR029028 Alpha/beta knot methyltransferases SHALO_RS01050 35eb872a32ae204ca7114da17fb3b6fc 222 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 1 220 1.3E-45 T 11-11-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SHALO_RS01050 35eb872a32ae204ca7114da17fb3b6fc 222 Pfam PF04452 RNA methyltransferase 16 220 3.2E-40 T 11-11-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SHALO_RS01050 35eb872a32ae204ca7114da17fb3b6fc 222 Gene3D G3DSA:3.40.1280.10 10 221 1.2E-35 T 11-11-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SHALO_RS01050 35eb872a32ae204ca7114da17fb3b6fc 222 PIRSF PIRSF015601 1 222 2.1E-41 T 11-11-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SHALO_RS07510 5d4b6a6d71c2af3be6a91c597faee651 187 SUPERFAMILY SSF142695 3 165 1.18E-47 T 11-11-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 SHALO_RS07510 5d4b6a6d71c2af3be6a91c597faee651 187 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 1 187 36.102 T 11-11-2016 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 SHALO_RS07510 5d4b6a6d71c2af3be6a91c597faee651 187 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 7 187 8.9E-73 T 11-11-2016 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 SHALO_RS07510 5d4b6a6d71c2af3be6a91c597faee651 187 Pfam PF00925 GTP cyclohydrolase II 9 158 1.4E-55 T 11-11-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 SHALO_RS03485 42fd94bef73672bcebe34533535e17cf 254 SUPERFAMILY SSF52540 22 149 1.02E-7 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS06670 efb8db3232d43d91c3c7569074f1d840 90 Gene3D G3DSA:1.10.260.40 19 82 7.3E-13 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SHALO_RS06670 efb8db3232d43d91c3c7569074f1d840 90 Pfam PF01381 Helix-turn-helix 26 80 8.0E-10 T 11-11-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SHALO_RS06670 efb8db3232d43d91c3c7569074f1d840 90 SUPERFAMILY SSF47413 15 82 1.9E-10 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SHALO_RS06670 efb8db3232d43d91c3c7569074f1d840 90 SMART SM00530 22 80 9.2E-5 T 11-11-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SHALO_RS05585 41597c2874d0f960dff0e994771decf3 349 Gene3D G3DSA:3.20.20.70 2 336 1.2E-57 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_RS05585 41597c2874d0f960dff0e994771decf3 349 TIGRFAM TIGR03699 menaquin_MqnC: dehypoxanthine futalosine cyclase 2 344 1.6E-154 T 11-11-2016 IPR022431 Cyclic dehypoxanthine futalosine synthase GO:0009234 KEGG: 00130+1.21.98.1|MetaCyc: PWY-7371|MetaCyc: PWY-7374 SHALO_RS05585 41597c2874d0f960dff0e994771decf3 349 SUPERFAMILY SSF102114 3 335 5.76E-51 T 11-11-2016 SHALO_RS05585 41597c2874d0f960dff0e994771decf3 349 Hamap MF_00992 Cyclic dehypoxanthine futalosine synthase [mqnC]. 1 348 53.332 T 11-11-2016 IPR022431 Cyclic dehypoxanthine futalosine synthase GO:0009234 KEGG: 00130+1.21.98.1|MetaCyc: PWY-7371|MetaCyc: PWY-7374 SHALO_RS05585 41597c2874d0f960dff0e994771decf3 349 PIRSF PIRSF004762 1 348 4.2E-107 T 11-11-2016 IPR005244 FO synthase, subunit 2-like GO:0016765|GO:0051188|GO:0051539 KEGG: 00680+2.5.1.77|MetaCyc: PWY-5198 SHALO_RS05585 41597c2874d0f960dff0e994771decf3 349 Pfam PF04055 Radical SAM superfamily 46 216 2.1E-14 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SHALO_RS05585 41597c2874d0f960dff0e994771decf3 349 TIGRFAM TIGR00423 TIGR00423: radical SAM domain protein, CofH subfamily 39 345 8.0E-130 T 11-11-2016 IPR020050 FO synthase, subunit 2 GO:0016765 KEGG: 00680+2.5.1.77|MetaCyc: PWY-5198 SHALO_RS01690 4198e5e2851814b80e176e60823fd96d 286 SUPERFAMILY SSF56300 1 138 1.22E-19 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like SHALO_RS01690 4198e5e2851814b80e176e60823fd96d 286 SUPERFAMILY SSF56300 182 269 1.22E-19 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like SHALO_RS01690 4198e5e2851814b80e176e60823fd96d 286 Pfam PF00149 Calcineurin-like phosphoesterase 1 254 1.3E-9 T 11-11-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 SHALO_RS01690 4198e5e2851814b80e176e60823fd96d 286 Gene3D G3DSA:3.60.21.10 203 272 1.6E-18 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like SHALO_RS01690 4198e5e2851814b80e176e60823fd96d 286 Gene3D G3DSA:3.60.21.10 1 120 1.6E-18 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like SHALO_RS00240 becfbe603184149ba7382167e3a4a0a9 266 Pfam PF02311 AraC-like ligand binding domain 18 136 2.0E-9 T 11-11-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 SHALO_RS00240 becfbe603184149ba7382167e3a4a0a9 266 Gene3D G3DSA:1.10.10.60 158 212 7.3E-19 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 SHALO_RS00240 becfbe603184149ba7382167e3a4a0a9 266 SUPERFAMILY SSF46689 212 259 4.93E-7 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 SHALO_RS00240 becfbe603184149ba7382167e3a4a0a9 266 Gene3D G3DSA:2.60.120.280 21 140 3.7E-5 T 11-11-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 SHALO_RS00240 becfbe603184149ba7382167e3a4a0a9 266 Pfam PF12833 Helix-turn-helix domain 181 258 1.3E-19 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SHALO_RS00240 becfbe603184149ba7382167e3a4a0a9 266 SUPERFAMILY SSF51215 19 141 4.84E-11 T 11-11-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 SHALO_RS00240 becfbe603184149ba7382167e3a4a0a9 266 Gene3D G3DSA:1.10.10.60 213 255 2.5E-8 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 SHALO_RS00240 becfbe603184149ba7382167e3a4a0a9 266 SUPERFAMILY SSF46689 160 208 1.42E-12 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 SHALO_RS00240 becfbe603184149ba7382167e3a4a0a9 266 SMART SM00342 175 257 9.9E-26 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SHALO_RS12530 cf0aca3163eb286e7863388ddecb4b87 350 SUPERFAMILY SSF55729 17 141 3.47E-7 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase SHALO_RS12530 cf0aca3163eb286e7863388ddecb4b87 350 Gene3D G3DSA:3.40.630.30 16 141 2.0E-9 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase SHALO_RS12775 aa63ebe8ff7f8fd427cf93ead689b3f3 271 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 98 259 2.8E-11 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHALO_RS12775 aa63ebe8ff7f8fd427cf93ead689b3f3 271 SUPERFAMILY SSF161098 73 258 6.15E-35 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHALO_RS12775 aa63ebe8ff7f8fd427cf93ead689b3f3 271 Gene3D G3DSA:1.10.3720.10 71 268 1.5E-27 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHALO_RS12775 aa63ebe8ff7f8fd427cf93ead689b3f3 271 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 24 270 2.3E-86 T 11-11-2016 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 SHALO_RS03895 a4e87cc15c8339a3792b11e50c4a5cb2 293 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 2 56 3.2E-6 T 11-11-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 SHALO_RS03895 a4e87cc15c8339a3792b11e50c4a5cb2 293 Gene3D G3DSA:1.10.150.130 1 97 4.2E-11 T 11-11-2016 IPR023109 Integrase/recombinase, N-terminal SHALO_RS03895 a4e87cc15c8339a3792b11e50c4a5cb2 293 SUPERFAMILY SSF56349 1 278 1.09E-54 T 11-11-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 SHALO_RS03895 a4e87cc15c8339a3792b11e50c4a5cb2 293 Pfam PF00589 Phage integrase family 106 275 4.0E-18 T 11-11-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 SHALO_RS03895 a4e87cc15c8339a3792b11e50c4a5cb2 293 Gene3D G3DSA:1.10.443.10 105 277 7.6E-30 T 11-11-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 SHALO_RS11625 5b5dbcaa77ec4a7be2254a0e9b051fd7 118 SUPERFAMILY SSF142906 1 115 5.1E-40 T 11-11-2016 SHALO_RS11625 5b5dbcaa77ec4a7be2254a0e9b051fd7 118 Pfam PF04237 YjbR 13 102 2.1E-25 T 11-11-2016 IPR007351 Uncharacterised protein YjbR SHALO_RS01155 300b3d50dad1eaf6eed0cb4feadcb445 957 Pfam PF05359 Domain of Unknown Function (DUF748) 143 293 1.4E-17 T 11-11-2016 IPR008023 Protein of unknown function DUF748 SHALO_RS01155 300b3d50dad1eaf6eed0cb4feadcb445 957 Pfam PF05359 Domain of Unknown Function (DUF748) 571 715 9.4E-32 T 11-11-2016 IPR008023 Protein of unknown function DUF748 SHALO_RS01155 300b3d50dad1eaf6eed0cb4feadcb445 957 Pfam PF05359 Domain of Unknown Function (DUF748) 357 506 1.2E-20 T 11-11-2016 IPR008023 Protein of unknown function DUF748 SHALO_RS10280 721d29d752a3ecb642dacb8b5718f806 641 Pfam PF00905 Penicillin binding protein transpeptidase domain 318 587 4.8E-37 T 11-11-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 SHALO_RS10280 721d29d752a3ecb642dacb8b5718f806 641 Pfam PF00912 Transglycosylase 50 224 3.8E-59 T 11-11-2016 IPR001264 Glycosyl transferase, family 51 SHALO_RS10280 721d29d752a3ecb642dacb8b5718f806 641 SUPERFAMILY SSF53955 36 245 4.78E-71 T 11-11-2016 IPR023346 Lysozyme-like domain SHALO_RS10280 721d29d752a3ecb642dacb8b5718f806 641 Gene3D G3DSA:1.10.3810.10 54 226 4.1E-67 T 11-11-2016 SHALO_RS10280 721d29d752a3ecb642dacb8b5718f806 641 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 61 591 2.9E-181 T 11-11-2016 SHALO_RS10280 721d29d752a3ecb642dacb8b5718f806 641 Gene3D G3DSA:3.40.710.10 227 619 5.6E-115 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like SHALO_RS10280 721d29d752a3ecb642dacb8b5718f806 641 SUPERFAMILY SSF56601 256 620 2.82E-110 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like SHALO_RS10280 721d29d752a3ecb642dacb8b5718f806 641 SUPERFAMILY SSF56601 206 228 2.82E-110 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like SHALO_RS12595 ebf9ed91d6f24fa880db93b11052dc52 164 Pfam PF01475 Ferric uptake regulator family 30 151 2.3E-28 T 11-11-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 SHALO_RS12595 ebf9ed91d6f24fa880db93b11052dc52 164 Gene3D G3DSA:1.10.10.10 24 91 1.3E-12 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS12595 ebf9ed91d6f24fa880db93b11052dc52 164 SUPERFAMILY SSF46785 24 155 3.5E-27 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS14235 c108a78994ac7263a7a5dd0dfe6ba6f8 167 Gene3D G3DSA:3.40.50.360 10 163 2.5E-23 T 11-11-2016 IPR029039 Flavoprotein-like domain SHALO_RS14235 c108a78994ac7263a7a5dd0dfe6ba6f8 167 Pfam PF03358 NADPH-dependent FMN reductase 3 143 5.9E-23 T 11-11-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 SHALO_RS14235 c108a78994ac7263a7a5dd0dfe6ba6f8 167 SUPERFAMILY SSF52218 6 146 8.21E-22 T 11-11-2016 IPR029039 Flavoprotein-like domain SHALO_RS06725 4247130cb7b511a38f7702f14f3e86c3 246 SMART SM00849 36 217 0.0047 T 11-11-2016 IPR001279 Metallo-beta-lactamase SHALO_RS06725 4247130cb7b511a38f7702f14f3e86c3 246 Pfam PF12706 Beta-lactamase superfamily domain 49 217 3.4E-21 T 11-11-2016 IPR001279 Metallo-beta-lactamase SHALO_RS06725 4247130cb7b511a38f7702f14f3e86c3 246 SUPERFAMILY SSF56281 2 226 3.54E-36 T 11-11-2016 IPR001279 Metallo-beta-lactamase SHALO_RS06725 4247130cb7b511a38f7702f14f3e86c3 246 Gene3D G3DSA:3.60.15.10 2 220 1.9E-44 T 11-11-2016 IPR001279 Metallo-beta-lactamase SHALO_RS04020 d03d2a164154e7ca13b79608c128813f 330 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 33 329 2.8E-100 T 11-11-2016 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 SHALO_RS04020 d03d2a164154e7ca13b79608c128813f 330 SUPERFAMILY SSF46589 7 90 1.41E-13 T 11-11-2016 IPR010978 tRNA-binding arm GO:0000166 SHALO_RS04020 d03d2a164154e7ca13b79608c128813f 330 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 13 79 8.9E-13 T 11-11-2016 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 SHALO_RS04020 d03d2a164154e7ca13b79608c128813f 330 Pfam PF01409 tRNA synthetases class II core domain (F) 85 329 4.0E-98 T 11-11-2016 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 SHALO_RS04020 d03d2a164154e7ca13b79608c128813f 330 Gene3D G3DSA:3.30.930.10 3 330 1.9E-114 T 11-11-2016 SHALO_RS04020 d03d2a164154e7ca13b79608c128813f 330 SUPERFAMILY SSF55681 85 330 2.01E-73 T 11-11-2016 SHALO_RS04020 d03d2a164154e7ca13b79608c128813f 330 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 1 329 45.252 T 11-11-2016 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 SHALO_RS15165 7873b9dab902918542ca94b5aadc706a 89 SUPERFAMILY SSF143880 1 79 1.31E-12 T 11-11-2016 IPR018841 Protein of unknown function DUF2442 SHALO_RS15165 7873b9dab902918542ca94b5aadc706a 89 Gene3D G3DSA:3.30.2020.10 2 78 4.1E-10 T 11-11-2016 IPR018841 Protein of unknown function DUF2442 SHALO_RS15165 7873b9dab902918542ca94b5aadc706a 89 Pfam PF10387 Protein of unknown function (DUF2442) 5 78 7.4E-13 T 11-11-2016 IPR018841 Protein of unknown function DUF2442 SHALO_RS11390 d7af7b6210d073d9206274eb57ebf569 421 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 287 396 1.3E-25 T 11-11-2016 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 SHALO_RS11390 d7af7b6210d073d9206274eb57ebf569 421 SUPERFAMILY SSF81342 12 289 8.16E-82 T 11-11-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 SHALO_RS11390 d7af7b6210d073d9206274eb57ebf569 421 Gene3D G3DSA:1.20.810.10 12 412 6.8E-127 T 11-11-2016 IPR027387 Cytochrome b/b6-like domain Reactome: R-HSA-611105 SHALO_RS11390 d7af7b6210d073d9206274eb57ebf569 421 SUPERFAMILY SSF81648 243 389 1.31E-33 T 11-11-2016 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 SHALO_RS11390 d7af7b6210d073d9206274eb57ebf569 421 Pfam PF00033 Cytochrome b/b6/petB 29 215 8.1E-58 T 11-11-2016 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 SHALO_RS03315 f3eb602195554ac21355b2f652b48232 436 Pfam PF01225 Mur ligase family, catalytic domain 3 99 3.3E-20 T 11-11-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 SHALO_RS03315 f3eb602195554ac21355b2f652b48232 436 Pfam PF08245 Mur ligase middle domain 106 216 1.6E-8 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 SHALO_RS03315 f3eb602195554ac21355b2f652b48232 436 SUPERFAMILY SSF53623 88 288 1.24E-36 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 SHALO_RS03315 f3eb602195554ac21355b2f652b48232 436 Pfam PF02875 Mur ligase family, glutamate ligase domain 291 375 2.1E-15 T 11-11-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 SHALO_RS03315 f3eb602195554ac21355b2f652b48232 436 SUPERFAMILY SSF53244 289 433 1.01E-26 T 11-11-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 SHALO_RS03315 f3eb602195554ac21355b2f652b48232 436 Gene3D G3DSA:3.40.50.720 2 88 1.2E-30 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS03315 f3eb602195554ac21355b2f652b48232 436 Gene3D G3DSA:3.40.1190.10 90 291 2.1E-35 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 SHALO_RS03315 f3eb602195554ac21355b2f652b48232 436 SUPERFAMILY SSF51984 2 88 9.42E-26 T 11-11-2016 SHALO_RS03315 f3eb602195554ac21355b2f652b48232 436 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 3 430 1.8E-111 T 11-11-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387 SHALO_RS03315 f3eb602195554ac21355b2f652b48232 436 Gene3D G3DSA:3.90.190.20 292 430 2.0E-30 T 11-11-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 SHALO_RS05395 5616bce6ae3c339e515188a266482fa2 604 SUPERFAMILY SSF58104 281 584 2.75E-50 T 11-11-2016 SHALO_RS05395 5616bce6ae3c339e515188a266482fa2 604 Gene3D G3DSA:1.10.287.950 338 547 1.3E-43 T 11-11-2016 SHALO_RS05395 5616bce6ae3c339e515188a266482fa2 604 SMART SM00283 316 584 4.1E-30 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SHALO_RS05395 5616bce6ae3c339e515188a266482fa2 604 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 389 583 2.3E-35 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SHALO_RS01095 83e7c124fcf5eacd64fed886c6ca1ff0 105 SUPERFAMILY SSF52833 3 105 8.63E-38 T 11-11-2016 IPR012336 Thioredoxin-like fold SHALO_RS01095 83e7c124fcf5eacd64fed886c6ca1ff0 105 ProSitePatterns PS00194 Thioredoxin family active site. 22 40 - T 11-11-2016 IPR017937 Thioredoxin, conserved site GO:0045454 SHALO_RS01095 83e7c124fcf5eacd64fed886c6ca1ff0 105 Pfam PF00085 Thioredoxin 5 102 3.0E-32 T 11-11-2016 IPR013766 Thioredoxin domain GO:0045454 SHALO_RS01095 83e7c124fcf5eacd64fed886c6ca1ff0 105 TIGRFAM TIGR01068 thioredoxin: thioredoxin 8 103 3.3E-38 T 11-11-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 SHALO_RS01095 83e7c124fcf5eacd64fed886c6ca1ff0 105 PIRSF PIRSF000077 1 105 1.8E-39 T 11-11-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 SHALO_RS01095 83e7c124fcf5eacd64fed886c6ca1ff0 105 Gene3D G3DSA:3.40.30.10 2 104 6.6E-37 T 11-11-2016 IPR012336 Thioredoxin-like fold SHALO_RS01095 83e7c124fcf5eacd64fed886c6ca1ff0 105 PRINTS PR00421 Thioredoxin family signature 29 38 4.1E-10 T 11-11-2016 SHALO_RS01095 83e7c124fcf5eacd64fed886c6ca1ff0 105 PRINTS PR00421 Thioredoxin family signature 69 80 4.1E-10 T 11-11-2016 SHALO_RS01095 83e7c124fcf5eacd64fed886c6ca1ff0 105 PRINTS PR00421 Thioredoxin family signature 21 29 4.1E-10 T 11-11-2016 SHALO_RS08220 f60eb47362d05744df1425d2477a7882 186 Gene3D G3DSA:3.20.130.10 3 177 9.5E-72 T 11-11-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 SHALO_RS08220 f60eb47362d05744df1425d2477a7882 186 Pfam PF05683 Fumarase C-terminus 11 177 2.7E-56 T 11-11-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 SHALO_RS08220 f60eb47362d05744df1425d2477a7882 186 SUPERFAMILY SSF117457 5 177 3.4E-63 T 11-11-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 SHALO_RS08220 f60eb47362d05744df1425d2477a7882 186 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 15 177 1.9E-54 T 11-11-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 SHALO_RS09570 0271d865891e12e70bb10eef72cc576d 162 Hamap MF_01032 Methanogen homoaconitase small subunit [hacB]. 4 161 38.373 T 11-11-2016 IPR011827 Hydrolyase LeuD/HacB/DmdB GO:0008152|GO:0016836 KEGG: 00290+4.2.1.33 SHALO_RS09570 0271d865891e12e70bb10eef72cc576d 162 TIGRFAM TIGR02087 LEUD_arch: 3-isopropylmalate dehydratase, small subunit 6 158 5.8E-64 T 11-11-2016 IPR011827 Hydrolyase LeuD/HacB/DmdB GO:0008152|GO:0016836 KEGG: 00290+4.2.1.33 SHALO_RS09570 0271d865891e12e70bb10eef72cc576d 162 Gene3D G3DSA:3.20.19.10 6 138 3.0E-36 T 11-11-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel SHALO_RS09570 0271d865891e12e70bb10eef72cc576d 162 SUPERFAMILY SSF52016 2 160 7.85E-50 T 11-11-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel SHALO_RS09570 0271d865891e12e70bb10eef72cc576d 162 Pfam PF00694 Aconitase C-terminal domain 45 101 3.9E-21 T 11-11-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33 SHALO_RS07945 e17cc67263206e6151a31736389f96e9 129 Gene3D G3DSA:2.60.40.730 15 126 1.7E-19 T 11-11-2016 SHALO_RS07945 e17cc67263206e6151a31736389f96e9 129 Pfam PF01880 Desulfoferrodoxin 22 121 1.6E-16 T 11-11-2016 IPR002742 Desulfoferrodoxin, ferrous iron-binding domain GO:0005506|GO:0016491|GO:0055114 SHALO_RS07945 e17cc67263206e6151a31736389f96e9 129 SUPERFAMILY SSF49367 15 121 5.49E-18 T 11-11-2016 IPR002742 Desulfoferrodoxin, ferrous iron-binding domain GO:0005506|GO:0016491|GO:0055114 SHALO_RS11225 2b5924fd558cecb6363833af6e596011 190 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 8 185 1.4E-25 T 11-11-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 SHALO_RS00860 490525044db5ffcd9df6d64526cd3857 246 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHALO_RS00860 490525044db5ffcd9df6d64526cd3857 246 SMART SM00382 30 217 3.5E-14 T 11-11-2016 IPR003593 AAA+ ATPase domain SHALO_RS00860 490525044db5ffcd9df6d64526cd3857 246 Gene3D G3DSA:3.40.50.300 5 241 5.8E-85 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS00860 490525044db5ffcd9df6d64526cd3857 246 PIRSF PIRSF039085 2 245 1.5E-108 T 11-11-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 SHALO_RS00860 490525044db5ffcd9df6d64526cd3857 246 Pfam PF00005 ABC transporter 21 169 1.5E-37 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_RS00860 490525044db5ffcd9df6d64526cd3857 246 SUPERFAMILY SSF52540 5 239 1.6E-79 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS13690 9473510d0208b39f1cffa7390c2d6127 208 Pfam PF01810 LysE type translocator 17 206 6.5E-33 T 11-11-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 SHALO_RS07645 8887cf04170877c97bd1a89f646e0777 302 Gene3D G3DSA:3.40.50.1980 34 146 1.4E-17 T 11-11-2016 SHALO_RS07645 8887cf04170877c97bd1a89f646e0777 302 Gene3D G3DSA:3.40.50.1980 147 299 6.6E-23 T 11-11-2016 SHALO_RS07645 8887cf04170877c97bd1a89f646e0777 302 Pfam PF01497 Periplasmic binding protein 37 272 2.9E-24 T 11-11-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 SHALO_RS07645 8887cf04170877c97bd1a89f646e0777 302 SUPERFAMILY SSF53807 22 299 5.89E-49 T 11-11-2016 SHALO_RS12165 9f5cca43ae9d2d824abd0bc41cc58b8a 61 Hamap MF_01364_B 30S ribosomal protein S14 type Z [rpsZ]. 1 61 25.579 T 11-11-2016 IPR023053 Ribosomal protein S14, type Z SHALO_RS12165 9f5cca43ae9d2d824abd0bc41cc58b8a 61 ProSitePatterns PS00527 Ribosomal protein S14 signature. 23 45 - T 11-11-2016 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SHALO_RS12165 9f5cca43ae9d2d824abd0bc41cc58b8a 61 SUPERFAMILY SSF57716 3 61 3.56E-21 T 11-11-2016 SHALO_RS12165 9f5cca43ae9d2d824abd0bc41cc58b8a 61 Pfam PF00253 Ribosomal protein S14p/S29e 9 60 7.9E-24 T 11-11-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_RS12165 9f5cca43ae9d2d824abd0bc41cc58b8a 61 Gene3D G3DSA:4.10.830.10 1 61 1.4E-27 T 11-11-2016 SHALO_RS14630 c63f5e6361499489851f4b0165ec308c 231 SUPERFAMILY SSF53335 65 212 3.68E-31 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS14630 c63f5e6361499489851f4b0165ec308c 231 Pfam PF13578 Methyltransferase domain 86 190 7.9E-19 T 11-11-2016 SHALO_RS14630 c63f5e6361499489851f4b0165ec308c 231 Gene3D G3DSA:3.40.50.150 67 213 2.2E-35 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS03205 44e9623f92b619e5677e8f71edf530f4 372 Gene3D G3DSA:3.40.50.2300 54 140 4.3E-11 T 11-11-2016 SHALO_RS03205 44e9623f92b619e5677e8f71edf530f4 372 Gene3D G3DSA:3.40.50.2300 141 312 3.3E-41 T 11-11-2016 SHALO_RS03205 44e9623f92b619e5677e8f71edf530f4 372 Pfam PF13458 Periplasmic binding protein 22 354 8.9E-53 T 11-11-2016 IPR028081 Leucine-binding protein domain SHALO_RS03205 44e9623f92b619e5677e8f71edf530f4 372 SUPERFAMILY SSF53822 21 366 8.35E-78 T 11-11-2016 IPR028082 Periplasmic binding protein-like I SHALO_RS10200 e54f3149b9e1062b349412818be95047 230 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 228 5.3E-80 T 11-11-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 SHALO_RS10200 e54f3149b9e1062b349412818be95047 230 SUPERFAMILY SSF75217 1 227 1.31E-78 T 11-11-2016 IPR029028 Alpha/beta knot methyltransferases SHALO_RS10200 e54f3149b9e1062b349412818be95047 230 Gene3D G3DSA:3.40.1280.10 1 159 3.6E-56 T 11-11-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SHALO_RS10200 e54f3149b9e1062b349412818be95047 230 Gene3D G3DSA:1.10.1270.20 160 227 4.4E-19 T 11-11-2016 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 SHALO_RS10200 e54f3149b9e1062b349412818be95047 230 PIRSF PIRSF000386 1 230 1.7E-80 T 11-11-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 SHALO_RS10200 e54f3149b9e1062b349412818be95047 230 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 230 80.142 T 11-11-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 SHALO_RS10200 e54f3149b9e1062b349412818be95047 230 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 220 1.2E-50 T 11-11-2016 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 SHALO_RS02160 39fc6c2de6c953a1f43e27dfd191250e 246 Pfam PF09681 N-terminal phage replisome organiser (Phage_rep_org_N) 7 122 4.2E-31 T 11-11-2016 IPR010056 Phage replisome organiser, N-terminal domain SHALO_RS02160 39fc6c2de6c953a1f43e27dfd191250e 246 TIGRFAM TIGR01714 phage_rep_org_N: phage replisome organizer, putative, N-terminal region 7 121 2.7E-34 T 11-11-2016 IPR010056 Phage replisome organiser, N-terminal domain SHALO_RS08380 731a4f57cc691c142a1210caa29f9a83 141 PIRSF PIRSF004638 1 141 4.0E-33 T 11-11-2016 IPR005265 Uncharacterised protein family UPF0093 SHALO_RS08380 731a4f57cc691c142a1210caa29f9a83 141 Pfam PF03653 Uncharacterised protein family (UPF0093) 2 141 5.2E-31 T 11-11-2016 IPR005265 Uncharacterised protein family UPF0093 SHALO_RS13655 cd7fac45062b937ec024d812ea71c43c 440 Pfam PF00561 alpha/beta hydrolase fold 44 281 2.1E-28 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 SHALO_RS13655 cd7fac45062b937ec024d812ea71c43c 440 SUPERFAMILY SSF53474 31 296 1.91E-46 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold SHALO_RS13655 cd7fac45062b937ec024d812ea71c43c 440 PRINTS PR00111 Alpha/beta hydrolase fold signature 70 85 1.7E-15 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 SHALO_RS13655 cd7fac45062b937ec024d812ea71c43c 440 PRINTS PR00111 Alpha/beta hydrolase fold signature 128 141 1.7E-15 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 SHALO_RS13655 cd7fac45062b937ec024d812ea71c43c 440 PRINTS PR00111 Alpha/beta hydrolase fold signature 241 255 1.7E-15 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 SHALO_RS13655 cd7fac45062b937ec024d812ea71c43c 440 PRINTS PR00111 Alpha/beta hydrolase fold signature 114 127 1.7E-15 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 SHALO_RS13655 cd7fac45062b937ec024d812ea71c43c 440 Gene3D G3DSA:3.40.50.1820 32 298 6.0E-52 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold SHALO_RS03060 f92d03035d504e9cc769f340747d5596 170 TIGRFAM TIGR00701 TIGR00701: TIGR00701 family protein 4 144 6.5E-42 T 11-11-2016 IPR014351 Conserved hypothetical protein CHP00701 SHALO_RS03060 f92d03035d504e9cc769f340747d5596 170 Pfam PF03653 Uncharacterised protein family (UPF0093) 2 144 6.2E-48 T 11-11-2016 IPR005265 Uncharacterised protein family UPF0093 SHALO_RS03060 f92d03035d504e9cc769f340747d5596 170 PIRSF PIRSF004638 1 147 2.3E-42 T 11-11-2016 IPR005265 Uncharacterised protein family UPF0093 SHALO_RS04195 aab8f9ca4335c21cbbe527f45c03e416 1182 SUPERFAMILY SSF89550 7 277 3.34E-34 T 11-11-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 SHALO_RS04195 aab8f9ca4335c21cbbe527f45c03e416 1182 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 1057 0.0 T 11-11-2016 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHALO_RS04195 aab8f9ca4335c21cbbe527f45c03e416 1182 Pfam PF14579 Helix-hairpin-helix motif 833 926 4.9E-22 T 11-11-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHALO_RS04195 aab8f9ca4335c21cbbe527f45c03e416 1182 Pfam PF02811 PHP domain 8 187 6.6E-51 T 11-11-2016 IPR004013 PHP domain GO:0003824 SHALO_RS04195 aab8f9ca4335c21cbbe527f45c03e416 1182 SMART SM00481 7 74 3.8E-32 T 11-11-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 SHALO_RS04195 aab8f9ca4335c21cbbe527f45c03e416 1182 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 319 759 1.4E-173 T 11-11-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHALO_RS04195 aab8f9ca4335c21cbbe527f45c03e416 1182 Gene3D G3DSA:1.10.150.280 865 912 1.6E-4 T 11-11-2016 SHALO_RS04195 aab8f9ca4335c21cbbe527f45c03e416 1182 Gene3D G3DSA:3.20.20.140 7 270 1.2E-46 T 11-11-2016 SHALO_RS13450 c08a340122da9505b7411f4c8ee14087 299 Gene3D G3DSA:1.20.950.20 87 298 9.8E-49 T 11-11-2016 SHALO_RS13450 c08a340122da9505b7411f4c8ee14087 299 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 92 295 3.4E-60 T 11-11-2016 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 SHALO_RS13450 c08a340122da9505b7411f4c8ee14087 299 Pfam PF01292 Prokaryotic cytochrome b561 94 275 8.6E-16 T 11-11-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 SHALO_RS13450 c08a340122da9505b7411f4c8ee14087 299 SUPERFAMILY SSF81342 87 298 4.47E-37 T 11-11-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 SHALO_RS05230 19253748bc002f8bca245626b5d64591 442 Gene3D G3DSA:1.20.1600.10 19 418 4.1E-51 T 11-11-2016 SHALO_RS05230 19253748bc002f8bca245626b5d64591 442 Pfam PF02321 Outer membrane efflux protein 29 210 4.8E-18 T 11-11-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SHALO_RS05230 19253748bc002f8bca245626b5d64591 442 Pfam PF02321 Outer membrane efflux protein 238 413 5.8E-19 T 11-11-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SHALO_RS05230 19253748bc002f8bca245626b5d64591 442 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 20 422 1.3E-70 T 11-11-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 SHALO_RS05230 19253748bc002f8bca245626b5d64591 442 SUPERFAMILY SSF56954 5 419 1.27E-62 T 11-11-2016 SHALO_RS13890 4bcca873ad09341ad13d2c46cb98347a 64 PIRSF PIRSF037225 2 63 7.4E-17 T 11-11-2016 IPR017143 Uncharacterised conserved protein UCP037225 SHALO_RS13890 4bcca873ad09341ad13d2c46cb98347a 64 Pfam PF14255 Cysteine-rich CPXCG 6 56 1.5E-18 T 11-11-2016 IPR025990 Cysteine-rich CPXCG protein SHALO_RS13765 f068ef067311afb36f3707a646a4495d 273 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 94 255 5.3E-16 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHALO_RS13765 f068ef067311afb36f3707a646a4495d 273 Gene3D G3DSA:1.10.3720.10 72 261 7.9E-20 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHALO_RS13765 f068ef067311afb36f3707a646a4495d 273 SUPERFAMILY SSF161098 72 258 1.57E-28 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHALO_RS12255 aece8c9588e1dd3612a1e7392ea3bc91 635 Pfam PF03239 Iron permease FTR1 family 288 502 5.4E-26 T 11-11-2016 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0006827|GO:0016020|GO:0033573 SHALO_RS04540 de35e3d9e01fda0fec96b81c9b249e9e 236 Pfam PF01925 Sulfite exporter TauE/SafE 8 230 1.6E-20 T 11-11-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 SHALO_RS10245 a906e0ccc38651522d656495b1e0ec7a 285 Gene3D G3DSA:1.20.58.180 210 282 7.1E-33 T 11-11-2016 SHALO_RS10245 a906e0ccc38651522d656495b1e0ec7a 285 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 4 282 8.1E-145 T 11-11-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SHALO_RS10245 a906e0ccc38651522d656495b1e0ec7a 285 SUPERFAMILY SSF55681 3 282 2.46E-127 T 11-11-2016 SHALO_RS10245 a906e0ccc38651522d656495b1e0ec7a 285 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 108 132 9.4E-69 T 11-11-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SHALO_RS10245 a906e0ccc38651522d656495b1e0ec7a 285 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 56 71 9.4E-69 T 11-11-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SHALO_RS10245 a906e0ccc38651522d656495b1e0ec7a 285 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 157 172 9.4E-69 T 11-11-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SHALO_RS10245 a906e0ccc38651522d656495b1e0ec7a 285 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 246 262 9.4E-69 T 11-11-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SHALO_RS10245 a906e0ccc38651522d656495b1e0ec7a 285 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 134 154 9.4E-69 T 11-11-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SHALO_RS10245 a906e0ccc38651522d656495b1e0ec7a 285 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 77 97 9.4E-69 T 11-11-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SHALO_RS10245 a906e0ccc38651522d656495b1e0ec7a 285 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 2 283 57.472 T 11-11-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SHALO_RS10245 a906e0ccc38651522d656495b1e0ec7a 285 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 3 282 8.8E-156 T 11-11-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SHALO_RS10245 a906e0ccc38651522d656495b1e0ec7a 285 Gene3D G3DSA:3.30.930.10 2 208 3.0E-99 T 11-11-2016 SHALO_RS09330 54c85817c19092b759856ac259716ab4 628 SUPERFAMILY SSF55874 483 614 7.6E-21 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS09330 54c85817c19092b759856ac259716ab4 628 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 524 614 1.0E-8 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS09330 54c85817c19092b759856ac259716ab4 628 SUPERFAMILY SSF47384 407 475 5.69E-7 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS09330 54c85817c19092b759856ac259716ab4 628 Pfam PF10442 FIST C domain 216 338 2.2E-10 T 11-11-2016 IPR019494 FIST, C-domain SHALO_RS09330 54c85817c19092b759856ac259716ab4 628 Pfam PF08495 FIST N domain 29 214 1.3E-28 T 11-11-2016 IPR013702 FIST domain, N-terminal SHALO_RS09330 54c85817c19092b759856ac259716ab4 628 SMART SM00897 26 215 6.7E-34 T 11-11-2016 IPR013702 FIST domain, N-terminal SHALO_RS09330 54c85817c19092b759856ac259716ab4 628 SMART SM01204 216 339 1.6E-17 T 11-11-2016 IPR019494 FIST, C-domain SHALO_RS09330 54c85817c19092b759856ac259716ab4 628 Pfam PF00512 His Kinase A (phospho-acceptor) domain 417 476 2.7E-7 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS09330 54c85817c19092b759856ac259716ab4 628 Gene3D G3DSA:3.30.565.10 483 620 3.4E-19 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS09330 54c85817c19092b759856ac259716ab4 628 SMART SM00387 522 627 1.4E-12 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS09330 54c85817c19092b759856ac259716ab4 628 SMART SM00388 416 478 2.1E-7 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS10290 39efd7e40d70a65a4cf534df30f629a8 363 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 220 229 - T 11-11-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 SHALO_RS10290 39efd7e40d70a65a4cf534df30f629a8 363 Gene3D G3DSA:3.40.640.10 46 247 2.7E-63 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SHALO_RS10290 39efd7e40d70a65a4cf534df30f629a8 363 Pfam PF00155 Aminotransferase class I and II 25 356 3.7E-34 T 11-11-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SHALO_RS10290 39efd7e40d70a65a4cf534df30f629a8 363 SUPERFAMILY SSF53383 3 360 2.5E-70 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase SHALO_RS10290 39efd7e40d70a65a4cf534df30f629a8 363 Gene3D G3DSA:3.90.1150.10 248 359 1.7E-11 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SHALO_RS13150 4fe3977789bb6e9bceac72e0b876bebf 223 SUPERFAMILY SSF54862 37 217 1.78E-54 T 11-11-2016 SHALO_RS13150 4fe3977789bb6e9bceac72e0b876bebf 223 Pfam PF13247 4Fe-4S dicluster domain 89 183 7.7E-21 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_RS13150 4fe3977789bb6e9bceac72e0b876bebf 223 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 127 138 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_RS13150 4fe3977789bb6e9bceac72e0b876bebf 223 Gene3D G3DSA:3.30.70.20 40 107 2.1E-16 T 11-11-2016 SHALO_RS13150 4fe3977789bb6e9bceac72e0b876bebf 223 Gene3D G3DSA:3.30.70.20 146 218 4.8E-16 T 11-11-2016 SHALO_RS13150 4fe3977789bb6e9bceac72e0b876bebf 223 Gene3D G3DSA:3.30.70.20 108 145 1.4E-19 T 11-11-2016 SHALO_RS08305 c4c0f7ea47bd1df8469c31e6af12d47d 120 Pfam PF00085 Thioredoxin 20 99 2.4E-8 T 11-11-2016 IPR013766 Thioredoxin domain GO:0045454 SHALO_RS08305 c4c0f7ea47bd1df8469c31e6af12d47d 120 SUPERFAMILY SSF52833 4 97 1.61E-10 T 11-11-2016 IPR012336 Thioredoxin-like fold SHALO_RS08305 c4c0f7ea47bd1df8469c31e6af12d47d 120 Gene3D G3DSA:3.40.30.10 3 100 3.1E-10 T 11-11-2016 IPR012336 Thioredoxin-like fold SHALO_RS12900 812f8006e7d55379de27c3e32f1ecb49 71 SUPERFAMILY SSF47598 2 42 1.09E-6 T 11-11-2016 IPR010985 Ribbon-helix-helix GO:0006355 SHALO_RS04900 7109a823221e39a7863007fef11a1a12 284 Gene3D G3DSA:1.10.760.10 171 247 1.7E-13 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS04900 7109a823221e39a7863007fef11a1a12 284 SUPERFAMILY SSF46626 160 267 2.63E-16 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS04900 7109a823221e39a7863007fef11a1a12 284 SUPERFAMILY SSF46626 29 150 3.69E-19 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS04900 7109a823221e39a7863007fef11a1a12 284 Pfam PF00034 Cytochrome c 53 151 2.3E-13 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS04900 7109a823221e39a7863007fef11a1a12 284 Gene3D G3DSA:1.20.5.100 252 284 2.2E-9 T 11-11-2016 SHALO_RS04900 7109a823221e39a7863007fef11a1a12 284 Gene3D G3DSA:1.10.760.10 5 170 2.5E-18 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS13165 5ed2024b4455715e31dc72a479342718 471 SUPERFAMILY SSF55874 326 471 1.92E-23 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS13165 5ed2024b4455715e31dc72a479342718 471 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 368 468 1.4E-7 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS13165 5ed2024b4455715e31dc72a479342718 471 Pfam PF11845 Protein of unknown function (DUF3365) 12 200 7.3E-33 T 11-11-2016 IPR021796 Protein of unknown function DUF3365 SHALO_RS13165 5ed2024b4455715e31dc72a479342718 471 Gene3D G3DSA:3.30.565.10 327 471 9.5E-24 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS13165 5ed2024b4455715e31dc72a479342718 471 SMART SM00387 366 471 1.3E-8 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS13165 5ed2024b4455715e31dc72a479342718 471 SUPERFAMILY SSF47384 250 321 3.53E-6 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS08625 f4508ced87b5b2b5dac58f4e9d65ec6a 267 Gene3D G3DSA:1.10.10.10 4 82 6.4E-23 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS08625 f4508ced87b5b2b5dac58f4e9d65ec6a 267 SUPERFAMILY SSF46785 5 82 1.82E-13 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS05730 8e26ff8262e667bf9ef7493e4e5617e0 396 SUPERFAMILY SSF53383 10 394 8.82E-97 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase SHALO_RS05730 8e26ff8262e667bf9ef7493e4e5617e0 396 Pfam PF00202 Aminotransferase class-III 21 390 1.1E-89 T 11-11-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SHALO_RS05730 8e26ff8262e667bf9ef7493e4e5617e0 396 Gene3D G3DSA:3.90.1150.10 300 393 5.4E-27 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SHALO_RS05730 8e26ff8262e667bf9ef7493e4e5617e0 396 Gene3D G3DSA:3.90.1150.10 8 55 5.4E-27 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SHALO_RS05730 8e26ff8262e667bf9ef7493e4e5617e0 396 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 218 255 - T 11-11-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SHALO_RS05730 8e26ff8262e667bf9ef7493e4e5617e0 396 Gene3D G3DSA:3.40.640.10 56 297 7.7E-65 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SHALO_RS05730 8e26ff8262e667bf9ef7493e4e5617e0 396 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 9 393 37.388 T 11-11-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 SHALO_RS04680 7374eaf26c700d2f7f27a653eac6ba20 303 Pfam PF05368 NmrA-like family 5 239 2.5E-15 T 11-11-2016 IPR008030 NmrA-like domain Reactome: R-HSA-70635 SHALO_RS04680 7374eaf26c700d2f7f27a653eac6ba20 303 SUPERFAMILY SSF51735 4 256 3.74E-18 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS04680 7374eaf26c700d2f7f27a653eac6ba20 303 Gene3D G3DSA:3.40.50.720 3 191 2.3E-11 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS01700 95068a4131599207e031c49d27e87df2 232 SUPERFAMILY SSF52317 2 191 1.29E-52 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like SHALO_RS01700 95068a4131599207e031c49d27e87df2 232 Gene3D G3DSA:3.40.50.880 1 226 1.5E-57 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like SHALO_RS01700 95068a4131599207e031c49d27e87df2 232 Pfam PF00117 Glutamine amidotransferase class-I 23 185 1.8E-21 T 11-11-2016 IPR017926 Glutamine amidotransferase SHALO_RS00765 1726648b545863de5a16d33ff8a6f11a 201 Pfam PF01914 MarC family integral membrane protein 7 197 2.8E-53 T 11-11-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 SHALO_RS14225 35787678a1d0708c990ed3d771157e83 150 Pfam PF03733 Inner membrane component domain 76 126 2.5E-17 T 11-11-2016 IPR005185 Inner membrane component domain SHALO_RS14225 35787678a1d0708c990ed3d771157e83 150 Pfam PF03733 Inner membrane component domain 4 54 1.6E-13 T 11-11-2016 IPR005185 Inner membrane component domain SHALO_RS14225 35787678a1d0708c990ed3d771157e83 150 PIRSF PIRSF028777 1 138 4.4E-50 T 11-11-2016 IPR031308 Uncharacterised conserved protein UCP028777 SHALO_RS03075 9b9e5a34bafd35981add502fa2ede781 540 Pfam PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding 57 376 1.7E-61 T 11-11-2016 IPR003776 YcaO-like domain SHALO_RS03075 9b9e5a34bafd35981add502fa2ede781 540 TIGRFAM TIGR00702 TIGR00702: YcaO-type kinase domain 10 390 2.1E-65 T 11-11-2016 IPR003776 YcaO-like domain SHALO_RS09920 b94773a95499cb4a6e47a08638e63aac 420 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 173 347 3.5E-10 T 11-11-2016 IPR004477 ComEC/Rec2-related protein SHALO_RS09920 b94773a95499cb4a6e47a08638e63aac 420 Pfam PF03772 Competence protein 160 417 1.3E-23 T 11-11-2016 IPR004477 ComEC/Rec2-related protein SHALO_RS02570 a053f223c086573d4902e1a2690800a8 627 Pfam PF00361 Proton-conducting membrane transporter 143 429 5.6E-84 T 11-11-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS02570 a053f223c086573d4902e1a2690800a8 627 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 72 127 5.9E-19 T 11-11-2016 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS02570 a053f223c086573d4902e1a2690800a8 627 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 116 136 7.0E-58 T 11-11-2016 SHALO_RS02570 a053f223c086573d4902e1a2690800a8 627 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 320 332 7.0E-58 T 11-11-2016 SHALO_RS02570 a053f223c086573d4902e1a2690800a8 627 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 88 113 7.0E-58 T 11-11-2016 SHALO_RS02570 a053f223c086573d4902e1a2690800a8 627 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 230 251 7.0E-58 T 11-11-2016 SHALO_RS02570 a053f223c086573d4902e1a2690800a8 627 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 252 278 7.0E-58 T 11-11-2016 SHALO_RS02570 a053f223c086573d4902e1a2690800a8 627 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 163 184 7.0E-58 T 11-11-2016 SHALO_RS02570 a053f223c086573d4902e1a2690800a8 627 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 422 441 7.0E-58 T 11-11-2016 SHALO_RS02570 a053f223c086573d4902e1a2690800a8 627 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 4 619 3.0E-192 T 11-11-2016 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS02570 a053f223c086573d4902e1a2690800a8 627 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 363 385 2.8E-6 T 11-11-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 SHALO_RS02570 a053f223c086573d4902e1a2690800a8 627 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 421 443 2.8E-6 T 11-11-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 SHALO_RS02570 a053f223c086573d4902e1a2690800a8 627 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 11 30 2.8E-6 T 11-11-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 SHALO_RS12045 7ba25a535a067b85ca60f6a1769c1f96 620 Pfam PF00672 HAMP domain 269 339 9.1E-13 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SHALO_RS12045 7ba25a535a067b85ca60f6a1769c1f96 620 SUPERFAMILY SSF103190 114 180 3.4E-5 T 11-11-2016 IPR029151 Periplasmic sensor domain-like SHALO_RS12045 7ba25a535a067b85ca60f6a1769c1f96 620 SUPERFAMILY SSF58104 311 619 6.41E-57 T 11-11-2016 SHALO_RS12045 7ba25a535a067b85ca60f6a1769c1f96 620 Pfam PF02743 Cache domain 35 248 5.8E-27 T 11-11-2016 IPR033479 Double Cache domain 1 SHALO_RS12045 7ba25a535a067b85ca60f6a1769c1f96 620 Gene3D G3DSA:3.30.450.20 138 264 1.6E-24 T 11-11-2016 SHALO_RS12045 7ba25a535a067b85ca60f6a1769c1f96 620 SMART SM00304 289 343 1.8E-9 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SHALO_RS12045 7ba25a535a067b85ca60f6a1769c1f96 620 SMART SM00283 344 619 5.9E-34 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SHALO_RS12045 7ba25a535a067b85ca60f6a1769c1f96 620 Gene3D G3DSA:1.10.287.950 377 609 1.3E-41 T 11-11-2016 SHALO_RS12045 7ba25a535a067b85ca60f6a1769c1f96 620 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 426 618 1.3E-38 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SHALO_RS10155 f5e893475954b4fbcee146ea753d2ac8 173 Pfam PF05433 Glycine zipper 2TM domain 69 108 3.9E-8 T 11-11-2016 IPR008816 Glycine zipper 2TM domain GO:0019867 SHALO_RS12015 a73a3a36d16a6e1aaf9abbaf303c51c4 175 SUPERFAMILY SSF158791 66 161 7.72E-7 T 11-11-2016 SHALO_RS12015 a73a3a36d16a6e1aaf9abbaf303c51c4 175 Gene3D G3DSA:1.25.60.10 66 161 3.7E-5 T 11-11-2016 SHALO_RS12285 d801515579e324225d47eb3c56d5a3e6 161 Gene3D G3DSA:3.40.30.10 5 161 4.1E-37 T 11-11-2016 IPR012336 Thioredoxin-like fold SHALO_RS12285 d801515579e324225d47eb3c56d5a3e6 161 Pfam PF00578 AhpC/TSA family 28 142 1.2E-18 T 11-11-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 SHALO_RS12285 d801515579e324225d47eb3c56d5a3e6 161 SUPERFAMILY SSF52833 26 157 1.72E-29 T 11-11-2016 IPR012336 Thioredoxin-like fold SHALO_RS00320 a1c9d62f1dd7f3e553a674de9ff3bf68 206 Gene3D G3DSA:1.10.3290.10 22 198 3.0E-37 T 11-11-2016 IPR003812 Fido domain SHALO_RS00320 a1c9d62f1dd7f3e553a674de9ff3bf68 206 SUPERFAMILY SSF140931 41 196 3.27E-27 T 11-11-2016 IPR003812 Fido domain SHALO_RS00320 a1c9d62f1dd7f3e553a674de9ff3bf68 206 Pfam PF02661 Fic/DOC family 53 155 4.6E-14 T 11-11-2016 IPR003812 Fido domain SHALO_RS11740 8880104c930e75363a3fbcd6cb3fa981 72 SUPERFAMILY SSF103473 7 70 3.01E-8 T 11-11-2016 IPR020846 Major facilitator superfamily domain SHALO_RS11740 8880104c930e75363a3fbcd6cb3fa981 72 Gene3D G3DSA:1.20.1250.20 8 69 9.6E-5 T 11-11-2016 SHALO_RS07135 51ca82ae6da5ec0ad261f59f5e22d6c4 853 Pfam PF13109 AsmA-like C-terminal region 631 845 6.6E-65 T 11-11-2016 SHALO_RS07135 51ca82ae6da5ec0ad261f59f5e22d6c4 853 Pfam PF13116 Protein of unknown function 206 453 7.4E-38 T 11-11-2016 IPR025263 Domain of unknown function DUF3971 SHALO_RS08575 64694d2cc0222b8ef1bdfd257818102e 327 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 18 324 24.252 T 11-11-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130 SHALO_RS08575 64694d2cc0222b8ef1bdfd257818102e 327 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 41 223 2.1E-30 T 11-11-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130 SHALO_RS08575 64694d2cc0222b8ef1bdfd257818102e 327 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 232 317 9.9E-11 T 11-11-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130 SHALO_RS08575 64694d2cc0222b8ef1bdfd257818102e 327 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 42 221 2.6E-36 T 11-11-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130 SHALO_RS10260 4d4c1cf480eec154414bc282289754ee 421 Pfam PF01136 Peptidase family U32 79 307 2.7E-83 T 11-11-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 SHALO_RS10260 4d4c1cf480eec154414bc282289754ee 421 ProSitePatterns PS01276 Peptidase family U32 signature. 163 181 - T 11-11-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 SHALO_RS08085 0c5d9d80c6981802084fae0d78aa869e 389 Gene3D G3DSA:3.90.1150.10 273 388 3.9E-43 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SHALO_RS08085 0c5d9d80c6981802084fae0d78aa869e 389 Pfam PF00155 Aminotransferase class I and II 30 381 1.4E-69 T 11-11-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SHALO_RS08085 0c5d9d80c6981802084fae0d78aa869e 389 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 227 251 2.2E-13 T 11-11-2016 SHALO_RS08085 0c5d9d80c6981802084fae0d78aa869e 389 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 113 134 2.2E-13 T 11-11-2016 SHALO_RS08085 0c5d9d80c6981802084fae0d78aa869e 389 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 160 184 2.2E-13 T 11-11-2016 SHALO_RS08085 0c5d9d80c6981802084fae0d78aa869e 389 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 196 219 2.2E-13 T 11-11-2016 SHALO_RS08085 0c5d9d80c6981802084fae0d78aa869e 389 Gene3D G3DSA:3.40.640.10 43 272 3.1E-73 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SHALO_RS08085 0c5d9d80c6981802084fae0d78aa869e 389 SUPERFAMILY SSF53383 2 388 1.63E-117 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase SHALO_RS12740 1dcb118105173dc09e04195b5919b0f1 561 SMART SM00267 394 561 4.6E-47 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS12740 1dcb118105173dc09e04195b5919b0f1 561 SUPERFAMILY SSF55073 410 559 6.67E-38 T 11-11-2016 IPR029787 Nucleotide cyclase SHALO_RS12740 1dcb118105173dc09e04195b5919b0f1 561 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 401 560 5.1E-42 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS12740 1dcb118105173dc09e04195b5919b0f1 561 Pfam PF00990 Diguanylate cyclase, GGDEF domain 405 557 6.6E-38 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS12740 1dcb118105173dc09e04195b5919b0f1 561 Gene3D G3DSA:3.30.450.20 294 362 7.4E-6 T 11-11-2016 SHALO_RS12740 1dcb118105173dc09e04195b5919b0f1 561 Gene3D G3DSA:3.30.70.270 407 560 8.4E-43 T 11-11-2016 SHALO_RS07330 a9a2dd6ea1ed865ad391f9f0381d5db3 234 Hamap MF_00415 Flagellar L-ring protein [flgH]. 1 232 24.635 T 11-11-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 SHALO_RS07330 a9a2dd6ea1ed865ad391f9f0381d5db3 234 PRINTS PR01008 Flagellar L-ring protein signature 148 163 7.6E-16 T 11-11-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 SHALO_RS07330 a9a2dd6ea1ed865ad391f9f0381d5db3 234 PRINTS PR01008 Flagellar L-ring protein signature 211 225 7.6E-16 T 11-11-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 SHALO_RS07330 a9a2dd6ea1ed865ad391f9f0381d5db3 234 PRINTS PR01008 Flagellar L-ring protein signature 174 190 7.6E-16 T 11-11-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 SHALO_RS07330 a9a2dd6ea1ed865ad391f9f0381d5db3 234 PRINTS PR01008 Flagellar L-ring protein signature 195 209 7.6E-16 T 11-11-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 SHALO_RS07330 a9a2dd6ea1ed865ad391f9f0381d5db3 234 PRINTS PR01008 Flagellar L-ring protein signature 68 80 7.6E-16 T 11-11-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 SHALO_RS07330 a9a2dd6ea1ed865ad391f9f0381d5db3 234 Pfam PF02107 Flagellar L-ring protein 47 233 4.1E-52 T 11-11-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 SHALO_RS04115 e423eef5acc4508d119d738e0c353311 284 SUPERFAMILY SSF53474 127 263 2.96E-15 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold SHALO_RS04115 e423eef5acc4508d119d738e0c353311 284 Gene3D G3DSA:3.40.50.1820 133 261 4.1E-14 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold SHALO_RS13375 9dd24662b7ff7e1a71b38327eeb21cd5 135 Pfam PF02472 Biopolymer transport protein ExbD/TolR 10 132 1.6E-30 T 11-11-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 SHALO_RS01760 213bf79c7a148827f70e0fa27aff1c62 395 Pfam PF02687 FtsX-like permease family 264 388 1.3E-14 T 11-11-2016 IPR003838 ABC transporter permease protein domain GO:0016020 SHALO_RS12845 213bf79c7a148827f70e0fa27aff1c62 395 Pfam PF02687 FtsX-like permease family 264 388 1.3E-14 T 11-11-2016 IPR003838 ABC transporter permease protein domain GO:0016020 SHALO_RS06170 645a2fab6a3ee7787d950c180dcd4511 283 Pfam PF02498 BRO family, N-terminal domain 22 109 4.8E-7 T 11-11-2016 IPR003497 BRO N-terminal domain SHALO_RS11490 cf53a3addde14ef69f852c5faf0cd398 334 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 321 1.4E-57 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS11490 cf53a3addde14ef69f852c5faf0cd398 334 Gene3D G3DSA:3.40.50.720 1 176 5.8E-55 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS11490 cf53a3addde14ef69f852c5faf0cd398 334 Gene3D G3DSA:3.90.25.10 177 332 8.6E-53 T 11-11-2016 SHALO_RS11490 cf53a3addde14ef69f852c5faf0cd398 334 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 331 5.9E-132 T 11-11-2016 IPR005886 UDP-glucose 4-epimerase GalE GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 SHALO_RS11490 cf53a3addde14ef69f852c5faf0cd398 334 SUPERFAMILY SSF51735 1 332 9.13E-97 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS03600 3c6ecf57ec576ccc916367a727d6ee88 179 SUPERFAMILY SSF55729 6 153 5.12E-11 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase SHALO_RS03600 3c6ecf57ec576ccc916367a727d6ee88 179 Gene3D G3DSA:3.40.630.30 4 155 2.5E-15 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase SHALO_RS14060 d2b6d2b55bd8a79a08571cfd779eb760 440 Gene3D G3DSA:3.30.565.10 286 415 2.3E-12 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS14060 d2b6d2b55bd8a79a08571cfd779eb760 440 Gene3D G3DSA:1.10.287.130 214 252 8.5E-5 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHALO_RS14060 d2b6d2b55bd8a79a08571cfd779eb760 440 SUPERFAMILY SSF55874 285 426 1.83E-17 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS14060 d2b6d2b55bd8a79a08571cfd779eb760 440 SMART SM00387 323 424 1.3E-8 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS14060 d2b6d2b55bd8a79a08571cfd779eb760 440 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 327 411 6.0E-8 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS00075 380618f87f61d5c4e1b91610cd80e9bf 204 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 12 176 1.8E-60 T 11-11-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 SHALO_RS00075 380618f87f61d5c4e1b91610cd80e9bf 204 Gene3D G3DSA:3.20.130.10 1 176 1.7E-64 T 11-11-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 SHALO_RS00075 380618f87f61d5c4e1b91610cd80e9bf 204 Pfam PF05683 Fumarase C-terminus 8 176 1.1E-39 T 11-11-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 SHALO_RS00075 380618f87f61d5c4e1b91610cd80e9bf 204 SUPERFAMILY SSF117457 3 176 9.94E-54 T 11-11-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 SHALO_RS14140 f47ee55e010e1373b237bbf99c0cad31 322 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 111 289 8.9E-48 T 11-11-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 SHALO_RS14140 f47ee55e010e1373b237bbf99c0cad31 322 Gene3D G3DSA:3.40.50.720 2 114 1.4E-25 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS14140 f47ee55e010e1373b237bbf99c0cad31 322 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 20 320 8.9E-18 T 11-11-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 SHALO_RS14140 f47ee55e010e1373b237bbf99c0cad31 322 SUPERFAMILY SSF51735 106 290 2.83E-45 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS14140 f47ee55e010e1373b237bbf99c0cad31 322 SUPERFAMILY SSF52283 3 124 1.13E-21 T 11-11-2016 SHALO_RS14140 f47ee55e010e1373b237bbf99c0cad31 322 Gene3D G3DSA:3.40.50.720 115 289 1.9E-50 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS01825 780360b6587f32ab21b2ecc61d37b91c 98 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 18 91 2.2E-10 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS01825 780360b6587f32ab21b2ecc61d37b91c 98 SUPERFAMILY SSF46626 6 96 1.41E-14 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS01825 780360b6587f32ab21b2ecc61d37b91c 98 Gene3D G3DSA:1.10.760.10 5 96 4.5E-15 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS13725 280ff9e084d441f3543afb4426982c46 325 Gene3D G3DSA:3.40.50.150 1 61 2.6E-20 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS13725 280ff9e084d441f3543afb4426982c46 325 Gene3D G3DSA:3.40.50.150 186 273 2.6E-20 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS13725 280ff9e084d441f3543afb4426982c46 325 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 3 286 5.4E-47 T 11-11-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 SHALO_RS13725 280ff9e084d441f3543afb4426982c46 325 SUPERFAMILY SSF53335 2 281 3.33E-42 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS13725 280ff9e084d441f3543afb4426982c46 325 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 203 209 - T 11-11-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 SHALO_RS13725 280ff9e084d441f3543afb4426982c46 325 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 31 45 2.3E-14 T 11-11-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 SHALO_RS13725 280ff9e084d441f3543afb4426982c46 325 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 200 212 2.3E-14 T 11-11-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 SHALO_RS13725 280ff9e084d441f3543afb4426982c46 325 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 52 65 2.3E-14 T 11-11-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 SHALO_RS13725 280ff9e084d441f3543afb4426982c46 325 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 3 19 2.3E-14 T 11-11-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 SHALO_RS09645 e1770e99c5e2a6049ec53c5c1a95f15d 213 Gene3D G3DSA:3.40.50.360 1 185 4.8E-43 T 11-11-2016 IPR029039 Flavoprotein-like domain SHALO_RS09645 e1770e99c5e2a6049ec53c5c1a95f15d 213 Pfam PF03358 NADPH-dependent FMN reductase 1 159 7.8E-31 T 11-11-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 SHALO_RS09645 e1770e99c5e2a6049ec53c5c1a95f15d 213 SUPERFAMILY SSF52218 1 192 3.88E-47 T 11-11-2016 IPR029039 Flavoprotein-like domain SHALO_RS14820 17104d85a42dc5f5e33b3ad8f923059c 444 Pfam PF05670 Domain of unknown function (DUF814) 344 424 1.4E-18 T 11-11-2016 IPR008532 Domain of unknown function DUF814 SHALO_RS14820 17104d85a42dc5f5e33b3ad8f923059c 444 Pfam PF05833 Fibronectin-binding protein A N-terminus (FbpA) 18 167 6.9E-10 T 11-11-2016 SHALO_RS14820 17104d85a42dc5f5e33b3ad8f923059c 444 Pfam PF05833 Fibronectin-binding protein A N-terminus (FbpA) 173 320 4.7E-10 T 11-11-2016 SHALO_RS14820 17104d85a42dc5f5e33b3ad8f923059c 444 Gene3D G3DSA:2.30.310.10 17 155 9.5E-16 T 11-11-2016 SHALO_RS08720 6c969567e117e65be893179def8cdec4 351 Pfam PF04055 Radical SAM superfamily 6 159 4.6E-17 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SHALO_RS08720 6c969567e117e65be893179def8cdec4 351 SMART SM00729 1 216 1.3E-38 T 11-11-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 SHALO_RS08720 6c969567e117e65be893179def8cdec4 351 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 3 347 9.7E-97 T 11-11-2016 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related GO:0004109|GO:0005737|GO:0006779|GO:0055114 SHALO_RS08720 6c969567e117e65be893179def8cdec4 351 SUPERFAMILY SSF102114 3 337 1.44E-81 T 11-11-2016 SHALO_RS08720 6c969567e117e65be893179def8cdec4 351 Gene3D G3DSA:3.80.30.20 3 218 1.1E-32 T 11-11-2016 IPR023404 Radical SAM, alpha/beta horseshoe SHALO_RS02200 daf3ba98cff1d247653185cf34f2878f 476 Pfam PF11074 Domain of unknown function(DUF2779) 278 402 1.8E-40 T 11-11-2016 IPR021301 Domain of unknown functionDUF2779 SHALO_RS13555 59a7adafbfa0cd29df05895049fce445 304 Gene3D G3DSA:3.40.1350.10 177 286 1.3E-8 T 11-11-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 Reactome: R-HSA-6784531 SHALO_RS13555 59a7adafbfa0cd29df05895049fce445 304 Pfam PF03008 Archaea bacterial proteins of unknown function 146 236 2.9E-14 T 11-11-2016 IPR004256 Domain of unknown function DUF234, DEXX-box ATPase C-terminal SHALO_RS13555 59a7adafbfa0cd29df05895049fce445 304 SUPERFAMILY SSF52980 181 271 5.63E-6 T 11-11-2016 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 SHALO_RS06990 36d4b0ddaeccb6330dd73b44d3a69257 281 SUPERFAMILY SSF74650 26 275 8.63E-53 T 11-11-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 SHALO_RS06990 36d4b0ddaeccb6330dd73b44d3a69257 281 Gene3D G3DSA:2.70.98.10 27 275 3.3E-67 T 11-11-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0003824|GO:0005975|GO:0030246 SHALO_RS06990 36d4b0ddaeccb6330dd73b44d3a69257 281 PIRSF PIRSF016020 7 278 1.2E-55 T 11-11-2016 IPR025532 Glucose-6-phosphate 1-epimerase SHALO_RS06990 36d4b0ddaeccb6330dd73b44d3a69257 281 Pfam PF01263 Aldose 1-epimerase 28 267 4.8E-36 T 11-11-2016 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 SHALO_RS12555 917ab76d4f7d3d8b18c65c9003b2a081 210 Gene3D G3DSA:3.40.50.300 5 205 3.7E-64 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS12555 917ab76d4f7d3d8b18c65c9003b2a081 210 Pfam PF13189 Cytidylate kinase-like family 8 190 3.1E-52 T 11-11-2016 IPR026865 Cytidylate kinase-like family MetaCyc: PWY-7205 SHALO_RS12555 917ab76d4f7d3d8b18c65c9003b2a081 210 SUPERFAMILY SSF52540 7 59 2.03E-8 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS12555 917ab76d4f7d3d8b18c65c9003b2a081 210 SUPERFAMILY SSF52540 94 208 2.03E-8 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS05115 5d613705d5d8d7f70901db1dd9308d84 741 SUPERFAMILY SSF52743 195 608 1.13E-49 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SHALO_RS05115 5d613705d5d8d7f70901db1dd9308d84 741 Gene3D G3DSA:3.40.50.200 269 532 2.8E-22 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SHALO_RS05115 5d613705d5d8d7f70901db1dd9308d84 741 Pfam PF00082 Subtilase family 288 530 2.0E-26 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SHALO_RS12805 af1ad4ae3f7751efa9f60fcf3eea20d2 171 Pfam PF06226 Protein of unknown function (DUF1007) 6 155 3.0E-26 T 11-11-2016 IPR010412 Protein of unknown function DUF1007 SHALO_RS03280 5a63f1dbde83dc34fef5e8801f16fd18 452 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 4 451 79.673 T 11-11-2016 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SHALO_RS03280 5a63f1dbde83dc34fef5e8801f16fd18 452 Gene3D G3DSA:3.90.1300.10 14 451 5.8E-144 T 11-11-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SHALO_RS03280 5a63f1dbde83dc34fef5e8801f16fd18 452 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 5 450 4.1E-166 T 11-11-2016 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SHALO_RS03280 5a63f1dbde83dc34fef5e8801f16fd18 452 ProSitePatterns PS00571 Amidases signature. 129 160 - T 11-11-2016 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 SHALO_RS03280 5a63f1dbde83dc34fef5e8801f16fd18 452 SUPERFAMILY SSF75304 49 450 1.7E-133 T 11-11-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SHALO_RS03280 5a63f1dbde83dc34fef5e8801f16fd18 452 Pfam PF01425 Amidase 45 440 4.7E-135 T 11-11-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SHALO_RS10075 c362a4743f59ff136b1a2822d6214db8 297 Pfam PF03547 Membrane transport protein 164 292 1.2E-6 T 11-11-2016 IPR004776 Membrane transport protein GO:0016021|GO:0055085 SHALO_RS10075 c362a4743f59ff136b1a2822d6214db8 297 Pfam PF03547 Membrane transport protein 2 132 1.2E-14 T 11-11-2016 IPR004776 Membrane transport protein GO:0016021|GO:0055085 SHALO_RS02190 b3c00f4955bd866c3851362b046a8d77 358 Pfam PF01844 HNH endonuclease 5 46 4.9E-7 T 11-11-2016 IPR002711 HNH endonuclease GO:0003676|GO:0004519 SHALO_RS12785 32f6d456a63f62fcd9ffd1fca2b0c91d 108 Pfam PF02694 Uncharacterised BCR, YnfA/UPF0060 family 4 108 5.3E-43 T 11-11-2016 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 SHALO_RS12785 32f6d456a63f62fcd9ffd1fca2b0c91d 108 Hamap MF_00010 UPF0060 membrane protein YnfA [ynfA]. 4 108 23.057 T 11-11-2016 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 SHALO_RS12785 32f6d456a63f62fcd9ffd1fca2b0c91d 108 SUPERFAMILY SSF103481 9 106 6.67E-6 T 11-11-2016 SHALO_RS04015 fbd094e9c6a79aafef63b0133c628ca5 118 Gene3D G3DSA:3.30.428.10 2 106 1.7E-33 T 11-11-2016 IPR011146 HIT-like domain GO:0003824 SHALO_RS04015 fbd094e9c6a79aafef63b0133c628ca5 118 Pfam PF01230 HIT domain 10 103 6.7E-27 T 11-11-2016 IPR001310 Histidine triad (HIT) protein SHALO_RS04015 fbd094e9c6a79aafef63b0133c628ca5 118 ProSitePatterns PS00892 HIT domain signature. 82 100 - T 11-11-2016 IPR019808 Histidine triad, conserved site SHALO_RS04015 fbd094e9c6a79aafef63b0133c628ca5 118 SUPERFAMILY SSF54197 2 106 6.1E-31 T 11-11-2016 IPR011146 HIT-like domain GO:0003824 SHALO_RS04015 fbd094e9c6a79aafef63b0133c628ca5 118 PRINTS PR00332 Histidine triad family signature 24 42 3.2E-19 T 11-11-2016 IPR001310 Histidine triad (HIT) protein SHALO_RS04015 fbd094e9c6a79aafef63b0133c628ca5 118 PRINTS PR00332 Histidine triad family signature 3 19 3.2E-19 T 11-11-2016 IPR001310 Histidine triad (HIT) protein SHALO_RS04015 fbd094e9c6a79aafef63b0133c628ca5 118 PRINTS PR00332 Histidine triad family signature 89 99 3.2E-19 T 11-11-2016 IPR001310 Histidine triad (HIT) protein SHALO_RS00385 6e8420b768e589d66aa8b1f6987ef049 259 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 4 155 1.1E-8 T 11-11-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain SHALO_RS00385 6e8420b768e589d66aa8b1f6987ef049 259 Gene3D G3DSA:3.40.50.300 1 95 1.4E-8 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS00385 6e8420b768e589d66aa8b1f6987ef049 259 SUPERFAMILY SSF52540 1 164 1.31E-9 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS01480 1c46bf3d376d810032ecdc90384e7886 83 Gene3D G3DSA:3.30.1230.10 3 66 5.4E-6 T 11-11-2016 IPR007393 Domain of unknown function DUF448 SHALO_RS01480 1c46bf3d376d810032ecdc90384e7886 83 Pfam PF04296 Protein of unknown function (DUF448) 6 66 3.0E-5 T 11-11-2016 IPR007393 Domain of unknown function DUF448 SHALO_RS01480 1c46bf3d376d810032ecdc90384e7886 83 SUPERFAMILY SSF64376 2 66 1.83E-8 T 11-11-2016 IPR007393 Domain of unknown function DUF448 SHALO_RS11430 10c0c958137c408279e77c3ee0fc815a 354 Pfam PF00953 Glycosyl transferase family 4 94 278 6.3E-35 T 11-11-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 SHALO_RS11430 10c0c958137c408279e77c3ee0fc815a 354 ProSitePatterns PS01347 MraY family signature 1. 63 75 - T 11-11-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 SHALO_RS11430 10c0c958137c408279e77c3ee0fc815a 354 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 32 354 5.6E-116 T 11-11-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 SHALO_RS11430 10c0c958137c408279e77c3ee0fc815a 354 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 20 352 22.55 T 11-11-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 SHALO_RS11430 10c0c958137c408279e77c3ee0fc815a 354 ProSitePatterns PS01348 MraY family signature 2. 183 194 - T 11-11-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 SHALO_RS08810 68de77289ac0ef15cc091ac0c8d16b5b 524 SUPERFAMILY SSF56801 3 522 1.44E-107 T 11-11-2016 SHALO_RS08810 68de77289ac0ef15cc091ac0c8d16b5b 524 Gene3D G3DSA:3.40.50.980 4 168 8.6E-33 T 11-11-2016 SHALO_RS08810 68de77289ac0ef15cc091ac0c8d16b5b 524 Pfam PF00501 AMP-binding enzyme 11 426 7.1E-73 T 11-11-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 SHALO_RS08810 68de77289ac0ef15cc091ac0c8d16b5b 524 Gene3D G3DSA:2.30.38.10 329 416 1.9E-17 T 11-11-2016 SHALO_RS08810 68de77289ac0ef15cc091ac0c8d16b5b 524 Gene3D G3DSA:3.40.50.980 169 328 1.6E-23 T 11-11-2016 SHALO_RS08810 68de77289ac0ef15cc091ac0c8d16b5b 524 Gene3D G3DSA:3.30.300.30 420 522 2.0E-19 T 11-11-2016 SHALO_RS13330 37a1aacfd73fb6868291944a06af03db 65 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 4 25 7.3E-4 T 11-11-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal SHALO_RS14425 f5a6e9e9e7a7d20b89bd1e5d1583b0b7 416 TIGRFAM TIGR00935 2a45: arsenite/antimonite efflux pump membrane protein 2 416 5.5E-159 T 11-11-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 SHALO_RS14425 f5a6e9e9e7a7d20b89bd1e5d1583b0b7 416 PRINTS PR00758 Arsenical pump membrane protein signature 278 302 3.1E-77 T 11-11-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 SHALO_RS14425 f5a6e9e9e7a7d20b89bd1e5d1583b0b7 416 PRINTS PR00758 Arsenical pump membrane protein signature 101 125 3.1E-77 T 11-11-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 SHALO_RS14425 f5a6e9e9e7a7d20b89bd1e5d1583b0b7 416 PRINTS PR00758 Arsenical pump membrane protein signature 359 384 3.1E-77 T 11-11-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 SHALO_RS14425 f5a6e9e9e7a7d20b89bd1e5d1583b0b7 416 PRINTS PR00758 Arsenical pump membrane protein signature 217 242 3.1E-77 T 11-11-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 SHALO_RS14425 f5a6e9e9e7a7d20b89bd1e5d1583b0b7 416 PRINTS PR00758 Arsenical pump membrane protein signature 392 416 3.1E-77 T 11-11-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 SHALO_RS14425 f5a6e9e9e7a7d20b89bd1e5d1583b0b7 416 PRINTS PR00758 Arsenical pump membrane protein signature 177 200 3.1E-77 T 11-11-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 SHALO_RS14425 f5a6e9e9e7a7d20b89bd1e5d1583b0b7 416 PRINTS PR00758 Arsenical pump membrane protein signature 144 168 3.1E-77 T 11-11-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 SHALO_RS14425 f5a6e9e9e7a7d20b89bd1e5d1583b0b7 416 Pfam PF02040 Arsenical pump membrane protein 3 415 6.0E-138 T 11-11-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 SHALO_RS02010 1e80f209640c4e907aac0340a73f960d 252 SUPERFAMILY SSF143422 11 128 4.58E-25 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 SHALO_RS02010 1e80f209640c4e907aac0340a73f960d 252 Pfam PF01797 Transposase IS200 like 12 122 1.1E-16 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 SHALO_RS02010 1e80f209640c4e907aac0340a73f960d 252 Gene3D G3DSA:3.30.70.1290 19 125 4.5E-16 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 SHALO_RS02010 1e80f209640c4e907aac0340a73f960d 252 SMART SM01321 8 122 3.5E-37 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 SHALO_RS01320 8cecbf092147717ff6cb764ff7999df0 342 Pfam PF14841 FliG middle domain 126 199 2.3E-26 T 11-11-2016 IPR032779 Flagellar motor switch protein FliG, middle domain SHALO_RS01320 8cecbf092147717ff6cb764ff7999df0 342 Pfam PF14842 FliG N-terminal domain 14 115 5.6E-29 T 11-11-2016 IPR028263 Flagellar motor switch protein FliG, N-terminal domain SHALO_RS01320 8cecbf092147717ff6cb764ff7999df0 342 Gene3D G3DSA:1.10.220.30 19 81 3.2E-12 T 11-11-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical SHALO_RS01320 8cecbf092147717ff6cb764ff7999df0 342 SUPERFAMILY SSF48029 126 334 7.19E-59 T 11-11-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical SHALO_RS01320 8cecbf092147717ff6cb764ff7999df0 342 Gene3D G3DSA:1.10.220.30 205 339 3.2E-34 T 11-11-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical SHALO_RS01320 8cecbf092147717ff6cb764ff7999df0 342 Gene3D G3DSA:1.10.220.30 83 198 2.4E-28 T 11-11-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical SHALO_RS01320 8cecbf092147717ff6cb764ff7999df0 342 Pfam PF01706 FliG C-terminal domain 229 334 1.3E-33 T 11-11-2016 IPR023087 Flagellar motor switch protein FliG, C-terminal SHALO_RS01320 8cecbf092147717ff6cb764ff7999df0 342 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 12 341 8.8E-125 T 11-11-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 SHALO_RS01320 8cecbf092147717ff6cb764ff7999df0 342 SUPERFAMILY SSF48029 19 111 5.23E-17 T 11-11-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical SHALO_RS01320 8cecbf092147717ff6cb764ff7999df0 342 PRINTS PR00954 Flagellar motor switch protein FliG signature 258 278 4.3E-57 T 11-11-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 SHALO_RS01320 8cecbf092147717ff6cb764ff7999df0 342 PRINTS PR00954 Flagellar motor switch protein FliG signature 15 31 4.3E-57 T 11-11-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 SHALO_RS01320 8cecbf092147717ff6cb764ff7999df0 342 PRINTS PR00954 Flagellar motor switch protein FliG signature 205 230 4.3E-57 T 11-11-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 SHALO_RS01320 8cecbf092147717ff6cb764ff7999df0 342 PRINTS PR00954 Flagellar motor switch protein FliG signature 44 70 4.3E-57 T 11-11-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 SHALO_RS01320 8cecbf092147717ff6cb764ff7999df0 342 PRINTS PR00954 Flagellar motor switch protein FliG signature 125 148 4.3E-57 T 11-11-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 SHALO_RS01320 8cecbf092147717ff6cb764ff7999df0 342 PRINTS PR00954 Flagellar motor switch protein FliG signature 236 256 4.3E-57 T 11-11-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 SHALO_RS01320 8cecbf092147717ff6cb764ff7999df0 342 PRINTS PR00954 Flagellar motor switch protein FliG signature 282 308 4.3E-57 T 11-11-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 SHALO_RS01320 8cecbf092147717ff6cb764ff7999df0 342 PIRSF PIRSF003161 9 341 1.5E-112 T 11-11-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 SHALO_RS06875 c052248e76e5e3071032bc4a94232175 351 PRINTS PR01010 Flagellar P-ring protein signature 37 52 1.3E-72 T 11-11-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SHALO_RS06875 c052248e76e5e3071032bc4a94232175 351 PRINTS PR01010 Flagellar P-ring protein signature 81 100 1.3E-72 T 11-11-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SHALO_RS06875 c052248e76e5e3071032bc4a94232175 351 PRINTS PR01010 Flagellar P-ring protein signature 56 71 1.3E-72 T 11-11-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SHALO_RS06875 c052248e76e5e3071032bc4a94232175 351 PRINTS PR01010 Flagellar P-ring protein signature 183 201 1.3E-72 T 11-11-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SHALO_RS06875 c052248e76e5e3071032bc4a94232175 351 PRINTS PR01010 Flagellar P-ring protein signature 157 175 1.3E-72 T 11-11-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SHALO_RS06875 c052248e76e5e3071032bc4a94232175 351 PRINTS PR01010 Flagellar P-ring protein signature 22 37 1.3E-72 T 11-11-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SHALO_RS06875 c052248e76e5e3071032bc4a94232175 351 PRINTS PR01010 Flagellar P-ring protein signature 120 138 1.3E-72 T 11-11-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SHALO_RS06875 c052248e76e5e3071032bc4a94232175 351 PRINTS PR01010 Flagellar P-ring protein signature 103 120 1.3E-72 T 11-11-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SHALO_RS06875 c052248e76e5e3071032bc4a94232175 351 PRINTS PR01010 Flagellar P-ring protein signature 245 257 1.3E-72 T 11-11-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SHALO_RS06875 c052248e76e5e3071032bc4a94232175 351 Pfam PF02119 Flagellar P-ring protein 22 350 3.7E-114 T 11-11-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SHALO_RS06875 c052248e76e5e3071032bc4a94232175 351 Hamap MF_00416 Flagellar P-ring protein [flgI]. 2 351 34.326 T 11-11-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SHALO_RS09560 839a16ea39574492bfcd616de6641554 82 SUPERFAMILY SSF48452 5 50 1.14E-5 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SHALO_RS09560 839a16ea39574492bfcd616de6641554 82 Gene3D G3DSA:1.25.40.10 5 47 4.7E-4 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SHALO_RS07730 713c15ecdeea0ad58d6c795760b790e5 139 SUPERFAMILY SSF50022 41 137 1.57E-13 T 11-11-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 SHALO_RS07730 713c15ecdeea0ad58d6c795760b790e5 139 Pfam PF00355 Rieske [2Fe-2S] domain 45 126 2.8E-7 T 11-11-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 SHALO_RS07730 713c15ecdeea0ad58d6c795760b790e5 139 Gene3D G3DSA:2.102.10.10 41 138 1.5E-11 T 11-11-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 SHALO_RS09970 a4c58210bd619e8ae31f894a281be21a 176 Gene3D G3DSA:2.160.10.10 5 174 5.4E-48 T 11-11-2016 SHALO_RS09970 a4c58210bd619e8ae31f894a281be21a 176 SUPERFAMILY SSF51161 5 173 5.27E-50 T 11-11-2016 IPR011004 Trimeric LpxA-like SHALO_RS09970 a4c58210bd619e8ae31f894a281be21a 176 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 12 44 3.1E-5 T 11-11-2016 IPR001451 Hexapeptide repeat SHALO_RS09970 a4c58210bd619e8ae31f894a281be21a 176 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 95 130 1.1E-7 T 11-11-2016 IPR001451 Hexapeptide repeat SHALO_RS06930 5adbeee9be74d77cab081bcf286e0a3c 184 Pfam PF02581 Thiamine monophosphate synthase/TENI 4 180 1.2E-28 T 11-11-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 SHALO_RS06930 5adbeee9be74d77cab081bcf286e0a3c 184 SUPERFAMILY SSF51391 3 183 8.63E-34 T 11-11-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 SHALO_RS06930 5adbeee9be74d77cab081bcf286e0a3c 184 Gene3D G3DSA:3.20.20.70 3 182 1.4E-37 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_RS05565 75549c441b7176ffd1148ce8866b6e9f 106 Gene3D G3DSA:1.10.760.10 22 102 4.2E-6 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS05565 75549c441b7176ffd1148ce8866b6e9f 106 SUPERFAMILY SSF46626 22 102 2.91E-7 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS04400 b57cb6ac94aaafdd4de4201a21bb1f17 192 Pfam PF01965 DJ-1/PfpI family 4 168 1.2E-27 T 11-11-2016 IPR002818 DJ-1/PfpI SHALO_RS04400 b57cb6ac94aaafdd4de4201a21bb1f17 192 Gene3D G3DSA:3.40.50.880 3 187 4.0E-56 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like SHALO_RS04400 b57cb6ac94aaafdd4de4201a21bb1f17 192 SUPERFAMILY SSF52317 1 186 3.59E-44 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like SHALO_RS03135 dd97b3600a5824efedb63e0907c83707 427 PIRSF PIRSF006066 1 427 1.7E-163 T 11-11-2016 IPR004681 TRAP transporter permease protein GO:0016021 SHALO_RS03135 dd97b3600a5824efedb63e0907c83707 427 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 415 4.2E-122 T 11-11-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit SHALO_RS03135 dd97b3600a5824efedb63e0907c83707 427 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 421 1.7E-150 T 11-11-2016 IPR004681 TRAP transporter permease protein GO:0016021 SHALO_RS13900 14c42f21703c0134b1a185176c1aa92f 148 Gene3D G3DSA:3.90.1170.40 1 138 2.9E-30 T 11-11-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|Reactome: R-HSA-947581 SHALO_RS13900 14c42f21703c0134b1a185176c1aa92f 148 Pfam PF02391 MoaE protein 18 114 5.3E-12 T 11-11-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|Reactome: R-HSA-947581 SHALO_RS13900 14c42f21703c0134b1a185176c1aa92f 148 SUPERFAMILY SSF54690 17 137 2.48E-29 T 11-11-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|Reactome: R-HSA-947581 SHALO_RS13200 1c2f388c9028c35d4a9b5b704fa5f3a6 190 Pfam PF09335 SNARE associated Golgi protein 28 142 1.7E-14 T 11-11-2016 IPR032816 SNARE associated Golgi protein SHALO_RS08605 60513925671fbb00a85873c9381d3ab5 575 Pfam PF13899 Thioredoxin-like 474 547 1.0E-11 T 11-11-2016 SHALO_RS08605 60513925671fbb00a85873c9381d3ab5 575 SUPERFAMILY SSF74863 19 134 6.93E-20 T 11-11-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain SHALO_RS08605 60513925671fbb00a85873c9381d3ab5 575 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 167 371 1.0E-18 T 11-11-2016 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 SHALO_RS08605 60513925671fbb00a85873c9381d3ab5 575 Gene3D G3DSA:3.40.30.10 464 573 1.4E-31 T 11-11-2016 IPR012336 Thioredoxin-like fold SHALO_RS08605 60513925671fbb00a85873c9381d3ab5 575 SUPERFAMILY SSF52833 463 572 1.21E-23 T 11-11-2016 IPR012336 Thioredoxin-like fold SHALO_RS08605 60513925671fbb00a85873c9381d3ab5 575 Gene3D G3DSA:2.60.40.1250 17 136 9.5E-22 T 11-11-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain SHALO_RS08605 60513925671fbb00a85873c9381d3ab5 575 Pfam PF11412 Disulphide bond corrector protein DsbC 20 134 4.5E-16 T 11-11-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain SHALO_RS04300 b70d7c129b27380871d1bf4842402bbf 244 Gene3D G3DSA:3.40.980.10 7 166 3.5E-16 T 11-11-2016 IPR001453 MoaB/Mog domain SHALO_RS04300 b70d7c129b27380871d1bf4842402bbf 244 SUPERFAMILY SSF53218 7 165 9.68E-21 T 11-11-2016 IPR001453 MoaB/Mog domain SHALO_RS04300 b70d7c129b27380871d1bf4842402bbf 244 SMART SM00852 5 168 3.4E-14 T 11-11-2016 IPR001453 MoaB/Mog domain SHALO_RS04300 b70d7c129b27380871d1bf4842402bbf 244 Pfam PF00994 Probable molybdopterin binding domain 7 161 4.5E-17 T 11-11-2016 IPR001453 MoaB/Mog domain SHALO_RS07660 d0807673deb0ea5573a45426df216d84 215 TIGRFAM TIGR02467 CbiE: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit 6 204 2.2E-56 T 11-11-2016 IPR012818 Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase GO:0008276|GO:0009236 SHALO_RS07660 d0807673deb0ea5573a45426df216d84 215 Gene3D G3DSA:3.40.1010.10 3 107 3.4E-19 T 11-11-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 SHALO_RS07660 d0807673deb0ea5573a45426df216d84 215 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 3 186 3.4E-21 T 11-11-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 SHALO_RS07660 d0807673deb0ea5573a45426df216d84 215 Gene3D G3DSA:3.30.950.10 108 209 2.3E-20 T 11-11-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 SHALO_RS07660 d0807673deb0ea5573a45426df216d84 215 SUPERFAMILY SSF53790 3 205 2.22E-37 T 11-11-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 SHALO_RS05950 2fc6dc04906714a4aa62f94f1f515340 360 Pfam PF12704 MacB-like periplasmic core domain 16 204 1.8E-8 T 11-11-2016 IPR025857 MacB-like periplasmic core domain SHALO_RS05950 2fc6dc04906714a4aa62f94f1f515340 360 Pfam PF02687 FtsX-like permease family 234 351 4.3E-20 T 11-11-2016 IPR003838 ABC transporter permease protein domain GO:0016020 SHALO_RS06505 63a600ed96fe6f3e7676bff2aa46e7fb 380 SUPERFAMILY SSF58104 75 380 1.03E-50 T 11-11-2016 SHALO_RS06505 63a600ed96fe6f3e7676bff2aa46e7fb 380 Gene3D G3DSA:1.10.287.950 137 348 1.7E-43 T 11-11-2016 SHALO_RS06505 63a600ed96fe6f3e7676bff2aa46e7fb 380 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 182 378 1.8E-35 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SHALO_RS06505 63a600ed96fe6f3e7676bff2aa46e7fb 380 SMART SM00283 114 379 1.1E-37 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SHALO_RS09670 598f8929c9850b2d847ad626a308c6b0 65 TIGRFAM TIGR03833 TIGR03833: conserved hypothetical protein 4 63 7.8E-34 T 11-11-2016 IPR019240 Protein of unknown function DUF2196 SHALO_RS09670 598f8929c9850b2d847ad626a308c6b0 65 Pfam PF09962 Uncharacterized conserved protein (DUF2196) 4 63 1.6E-31 T 11-11-2016 IPR019240 Protein of unknown function DUF2196 SHALO_RS08700 74cea8e2bf3304461b57e42640165b23 217 Pfam PF13177 DNA polymerase III, delta subunit 50 120 2.5E-13 T 11-11-2016 SHALO_RS08700 74cea8e2bf3304461b57e42640165b23 217 SUPERFAMILY SSF52540 48 126 5.91E-13 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS08700 74cea8e2bf3304461b57e42640165b23 217 Gene3D G3DSA:3.40.50.300 48 121 8.7E-16 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS11925 f5585d60917d1ab7b15465aa9dee7a95 122 Gene3D G3DSA:1.10.260.40 44 116 9.9E-11 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SHALO_RS11925 f5585d60917d1ab7b15465aa9dee7a95 122 SUPERFAMILY SSF47413 60 117 2.82E-6 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SHALO_RS11925 f5585d60917d1ab7b15465aa9dee7a95 122 SMART SM00530 62 116 1.0E-4 T 11-11-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SHALO_RS13400 0ace5d42e6d9566c746b50e88f6b68da 340 Gene3D G3DSA:3.40.50.1980 77 160 2.4E-13 T 11-11-2016 SHALO_RS13400 0ace5d42e6d9566c746b50e88f6b68da 340 Pfam PF01497 Periplasmic binding protein 93 280 2.6E-16 T 11-11-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 SHALO_RS13400 0ace5d42e6d9566c746b50e88f6b68da 340 Gene3D G3DSA:3.40.50.1980 161 310 6.3E-23 T 11-11-2016 SHALO_RS13400 0ace5d42e6d9566c746b50e88f6b68da 340 SUPERFAMILY SSF53807 23 337 3.1E-47 T 11-11-2016 SHALO_RS00980 c5a82f6b3ffcc32492eb3145704cfd80 618 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 5 610 3.1E-224 T 11-11-2016 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS00980 c5a82f6b3ffcc32492eb3145704cfd80 618 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 64 120 7.0E-24 T 11-11-2016 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS00980 c5a82f6b3ffcc32492eb3145704cfd80 618 Pfam PF00361 Proton-conducting membrane transporter 132 420 2.9E-80 T 11-11-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS00980 c5a82f6b3ffcc32492eb3145704cfd80 618 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 243 269 1.2E-62 T 11-11-2016 SHALO_RS00980 c5a82f6b3ffcc32492eb3145704cfd80 618 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 311 323 1.2E-62 T 11-11-2016 SHALO_RS00980 c5a82f6b3ffcc32492eb3145704cfd80 618 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 81 106 1.2E-62 T 11-11-2016 SHALO_RS00980 c5a82f6b3ffcc32492eb3145704cfd80 618 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 413 432 1.2E-62 T 11-11-2016 SHALO_RS00980 c5a82f6b3ffcc32492eb3145704cfd80 618 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 109 129 1.2E-62 T 11-11-2016 SHALO_RS00980 c5a82f6b3ffcc32492eb3145704cfd80 618 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 156 177 1.2E-62 T 11-11-2016 SHALO_RS00980 c5a82f6b3ffcc32492eb3145704cfd80 618 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 221 242 1.2E-62 T 11-11-2016 SHALO_RS00980 c5a82f6b3ffcc32492eb3145704cfd80 618 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 261 283 2.1E-12 T 11-11-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 SHALO_RS00980 c5a82f6b3ffcc32492eb3145704cfd80 618 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 83 103 2.1E-12 T 11-11-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 SHALO_RS00980 c5a82f6b3ffcc32492eb3145704cfd80 618 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 35 54 2.1E-12 T 11-11-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 SHALO_RS00980 c5a82f6b3ffcc32492eb3145704cfd80 618 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 57 81 2.1E-12 T 11-11-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 SHALO_RS00980 c5a82f6b3ffcc32492eb3145704cfd80 618 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 412 434 2.1E-12 T 11-11-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 SHALO_RS14215 831f9e3970e2a2a5687ada8cf57284a4 209 PIRSF PIRSF006324 4 209 8.0E-42 T 11-11-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 SHALO_RS14215 831f9e3970e2a2a5687ada8cf57284a4 209 Pfam PF01810 LysE type translocator 19 207 7.3E-22 T 11-11-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 SHALO_RS09190 43fd5a260e6567269ebef548360e89a8 112 Pfam PF05656 Protein of unknown function (DUF805) 14 105 4.1E-24 T 11-11-2016 IPR008523 Protein of unknown function DUF805 GO:0016021 SHALO_RS14580 35df73722de309578efee0bf7d5a2ed1 195 Pfam PF13649 Methyltransferase domain 52 141 7.9E-7 T 11-11-2016 SHALO_RS14580 35df73722de309578efee0bf7d5a2ed1 195 SUPERFAMILY SSF53335 4 144 2.37E-16 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS14580 35df73722de309578efee0bf7d5a2ed1 195 Gene3D G3DSA:3.40.50.150 48 178 3.3E-13 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS08695 2bfc900fe201cf087885debdbca63476 381 Gene3D G3DSA:3.20.20.20 117 378 9.6E-89 T 11-11-2016 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 SHALO_RS08695 2bfc900fe201cf087885debdbca63476 381 PIRSF PIRSF000501 1 381 2.2E-145 T 11-11-2016 IPR016227 Dihydropteroate synthase, predicted KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 SHALO_RS08695 2bfc900fe201cf087885debdbca63476 381 Pfam PF00809 Pterin binding enzyme 122 361 2.1E-68 T 11-11-2016 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 SHALO_RS08695 2bfc900fe201cf087885debdbca63476 381 SUPERFAMILY SSF51717 113 378 2.88E-86 T 11-11-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 SHALO_RS08695 2bfc900fe201cf087885debdbca63476 381 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 121 375 5.0E-86 T 11-11-2016 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 SHALO_RS08695 2bfc900fe201cf087885debdbca63476 381 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 154 167 - T 11-11-2016 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 SHALO_RS13905 00e414de873813666bd8ca13a0cc25d6 73 SUPERFAMILY SSF54285 3 73 1.83E-9 T 11-11-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp SHALO_RS13905 00e414de873813666bd8ca13a0cc25d6 73 Gene3D G3DSA:3.10.20.30 11 73 3.6E-8 T 11-11-2016 IPR012675 Beta-grasp domain SHALO_RS13905 00e414de873813666bd8ca13a0cc25d6 73 Pfam PF02597 ThiS family 20 73 2.4E-8 T 11-11-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 Reactome: R-HSA-947581 SHALO_RS02155 42ec83e48b7ba9acb81ccaa38cacd4a2 234 Pfam PF01381 Helix-turn-helix 4 56 9.6E-10 T 11-11-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SHALO_RS02155 42ec83e48b7ba9acb81ccaa38cacd4a2 234 Gene3D G3DSA:1.10.260.40 4 63 2.8E-11 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SHALO_RS02155 42ec83e48b7ba9acb81ccaa38cacd4a2 234 SUPERFAMILY SSF47413 3 63 2.68E-10 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SHALO_RS02155 42ec83e48b7ba9acb81ccaa38cacd4a2 234 SMART SM00530 2 57 5.0E-7 T 11-11-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SHALO_RS00975 a621a1b0f1ea336627fefc0259434a9f 100 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 7 96 2.6E-21 T 11-11-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 SHALO_RS00975 a621a1b0f1ea336627fefc0259434a9f 100 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 2 100 19.364 T 11-11-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 SHALO_RS07590 fa555cb5b57cd8ef3914cf3925c58a3a 303 TIGRFAM TIGR00380 cobD: cobalamin biosynthesis protein CobD 4 284 1.5E-64 T 11-11-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 SHALO_RS07590 fa555cb5b57cd8ef3914cf3925c58a3a 303 Pfam PF03186 CobD/Cbib protein 8 280 1.9E-84 T 11-11-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 SHALO_RS07590 fa555cb5b57cd8ef3914cf3925c58a3a 303 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 1 303 70.52 T 11-11-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 SHALO_RS01910 c5441800a4d38fab8de7bff639619da9 342 Gene3D G3DSA:3.90.230.10 112 341 1.5E-77 T 11-11-2016 IPR000994 Peptidase M24, structural domain SHALO_RS01910 c5441800a4d38fab8de7bff639619da9 342 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 281 293 - T 11-11-2016 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site SHALO_RS01910 c5441800a4d38fab8de7bff639619da9 342 Gene3D G3DSA:3.40.350.10 3 96 3.9E-6 T 11-11-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal SHALO_RS01910 c5441800a4d38fab8de7bff639619da9 342 SUPERFAMILY SSF53092 4 98 3.66E-5 T 11-11-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal SHALO_RS01910 c5441800a4d38fab8de7bff639619da9 342 Pfam PF00557 Metallopeptidase family M24 121 334 1.1E-59 T 11-11-2016 IPR000994 Peptidase M24, structural domain SHALO_RS01910 c5441800a4d38fab8de7bff639619da9 342 SUPERFAMILY SSF55920 71 341 4.84E-66 T 11-11-2016 IPR000994 Peptidase M24, structural domain SHALO_RS10735 58f03dabc0600711edc8dc75d955d6c2 117 ProDom PD021295 MATURATION HYDROGENLYASE FORMATE HYCH LYASE HYCE PROCESSING OXIDOREDUCTASE J COMPONENT 2 88 4.0E-5 T 11-11-2016 IPR010005 Formate hydrogenlyase maturation HycH SHALO_RS10735 58f03dabc0600711edc8dc75d955d6c2 117 Pfam PF07450 Formate hydrogenlyase maturation protein HycH 2 92 3.3E-11 T 11-11-2016 IPR010005 Formate hydrogenlyase maturation HycH SHALO_RS09520 47880f387d04bcd02b602de2bc85128e 103 Hamap MF_01537 UPF0345 protein YaiE [yaiE]. 9 102 23.136 T 11-11-2016 IPR009664 Protein of unknown function DUF1255 SHALO_RS09520 47880f387d04bcd02b602de2bc85128e 103 Gene3D G3DSA:2.60.120.10 9 101 2.5E-31 T 11-11-2016 IPR014710 RmlC-like jelly roll fold SHALO_RS09520 47880f387d04bcd02b602de2bc85128e 103 SUPERFAMILY SSF51182 10 101 1.69E-28 T 11-11-2016 IPR011051 RmlC-like cupin domain SHALO_RS09520 47880f387d04bcd02b602de2bc85128e 103 Pfam PF06865 Protein of unknown function (DUF1255) 10 101 6.4E-32 T 11-11-2016 IPR009664 Protein of unknown function DUF1255 SHALO_RS14200 2bdcca621767a82f4a42988eeec74359 144 SUPERFAMILY SSF48695 39 134 4.19E-14 T 11-11-2016 IPR011031 Multihaem cytochrome SHALO_RS14200 2bdcca621767a82f4a42988eeec74359 144 Pfam PF14537 Cytochrome c3 48 133 3.2E-15 T 11-11-2016 SHALO_RS14200 2bdcca621767a82f4a42988eeec74359 144 Gene3D G3DSA:3.90.10.10 41 134 4.7E-12 T 11-11-2016 SHALO_RS03810 da0dd725ac1e0f52ad7336c55ee8b9e2 126 Gene3D G3DSA:3.40.50.2300 2 123 1.2E-34 T 11-11-2016 SHALO_RS03810 da0dd725ac1e0f52ad7336c55ee8b9e2 126 SUPERFAMILY SSF52172 4 124 1.57E-32 T 11-11-2016 IPR011006 CheY-like superfamily SHALO_RS03810 da0dd725ac1e0f52ad7336c55ee8b9e2 126 SMART SM00448 5 119 3.3E-29 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS03810 da0dd725ac1e0f52ad7336c55ee8b9e2 126 Pfam PF00072 Response regulator receiver domain 7 119 4.3E-25 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS09215 ffb3889626ba791c105e48d33d4da9c7 228 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 21 226 1.6E-14 T 11-11-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SHALO_RS09215 ffb3889626ba791c105e48d33d4da9c7 228 SUPERFAMILY SSF53850 16 226 5.83E-25 T 11-11-2016 SHALO_RS09215 ffb3889626ba791c105e48d33d4da9c7 228 Gene3D G3DSA:3.40.190.10 23 140 3.9E-7 T 11-11-2016 SHALO_RS10710 255f6b8d8e0a0867b9e32f964e99b098 217 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 130 211 4.1E-7 T 11-11-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 SHALO_RS10710 255f6b8d8e0a0867b9e32f964e99b098 217 ProDom PD037531 MEMBRANE HYDROGENASE SUBUNIT COMPONENT HYDROGENASE-4 E OXIDOREDUCTASE PRECURSOR SIGNAL 1.-.-.- 12 193 2.0E-72 T 11-11-2016 SHALO_RS06605 20e70b1154dec7d1c80eb5460315c5fa 373 Gene3D G3DSA:3.20.20.100 26 361 4.0E-41 T 11-11-2016 IPR023210 NADP-dependent oxidoreductase domain SHALO_RS06605 20e70b1154dec7d1c80eb5460315c5fa 373 SUPERFAMILY SSF51430 25 362 1.83E-38 T 11-11-2016 IPR023210 NADP-dependent oxidoreductase domain SHALO_RS06605 20e70b1154dec7d1c80eb5460315c5fa 373 Pfam PF00248 Aldo/keto reductase family 34 360 2.0E-31 T 11-11-2016 IPR023210 NADP-dependent oxidoreductase domain SHALO_RS12305 b94c8945fea533e9d713a654ca650c4b 357 ProSitePatterns PS00787 Chorismate synthase signature 1. 14 29 - T 11-11-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 SHALO_RS12305 b94c8945fea533e9d713a654ca650c4b 357 SUPERFAMILY SSF103263 1 348 9.03E-138 T 11-11-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 SHALO_RS12305 b94c8945fea533e9d713a654ca650c4b 357 TIGRFAM TIGR00033 aroC: chorismate synthase 9 345 1.2E-123 T 11-11-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 SHALO_RS12305 b94c8945fea533e9d713a654ca650c4b 357 Gene3D G3DSA:3.60.150.10 8 354 4.1E-146 T 11-11-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 SHALO_RS12305 b94c8945fea533e9d713a654ca650c4b 357 Hamap MF_00300 Chorismate synthase [aroC]. 8 349 36.583 T 11-11-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 SHALO_RS12305 b94c8945fea533e9d713a654ca650c4b 357 ProSitePatterns PS00789 Chorismate synthase signature 3. 316 332 - T 11-11-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 SHALO_RS12305 b94c8945fea533e9d713a654ca650c4b 357 Pfam PF01264 Chorismate synthase 8 342 1.5E-133 T 11-11-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 SHALO_RS12305 b94c8945fea533e9d713a654ca650c4b 357 PIRSF PIRSF001456 1 356 8.9E-135 T 11-11-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 SHALO_RS12305 b94c8945fea533e9d713a654ca650c4b 357 ProSitePatterns PS00788 Chorismate synthase signature 2. 122 138 - T 11-11-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 SHALO_RS10310 79a8de81391d5866f36d0e74e3cf8336 650 SUPERFAMILY SSF51445 39 306 1.58E-48 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily SHALO_RS10310 79a8de81391d5866f36d0e74e3cf8336 650 Gene3D G3DSA:3.20.20.80 63 306 3.7E-28 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SHALO_RS02245 0b76095c8f843d8f483e31022e1a93f0 613 Pfam PF05787 Bacterial protein of unknown function (DUF839) 171 558 9.8E-21 T 11-11-2016 IPR008557 Protein of unknown function DUF839 SHALO_RS05925 cb379733145d0460578c7fe716d7a569 255 Pfam PF00149 Calcineurin-like phosphoesterase 29 192 2.7E-16 T 11-11-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 SHALO_RS05925 cb379733145d0460578c7fe716d7a569 255 Gene3D G3DSA:3.60.21.10 28 210 1.0E-29 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like SHALO_RS05925 cb379733145d0460578c7fe716d7a569 255 SUPERFAMILY SSF56300 29 247 2.81E-38 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like SHALO_RS05235 15ef226b508cf4da701fc9986dbb0002 213 Pfam PF06035 Bacterial transglutaminase-like cysteine proteinase BTLCP 55 161 6.5E-14 T 11-11-2016 IPR010319 Transglutaminase-like cysteine peptidase, predicted SHALO_RS04295 a9b8c83fc81ac769f29fb2cc5a53e17c 548 SMART SM00646 386 541 2.5E-41 T 11-11-2016 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 SHALO_RS04295 a9b8c83fc81ac769f29fb2cc5a53e17c 548 SUPERFAMILY SSF53187 468 544 4.08E-48 T 11-11-2016 SHALO_RS04295 a9b8c83fc81ac769f29fb2cc5a53e17c 548 SUPERFAMILY SSF53187 325 424 4.08E-48 T 11-11-2016 SHALO_RS04295 a9b8c83fc81ac769f29fb2cc5a53e17c 548 Gene3D G3DSA:3.40.630.40 325 425 1.3E-55 T 11-11-2016 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 SHALO_RS04295 a9b8c83fc81ac769f29fb2cc5a53e17c 548 Gene3D G3DSA:3.40.630.40 465 544 1.3E-55 T 11-11-2016 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 SHALO_RS04295 a9b8c83fc81ac769f29fb2cc5a53e17c 548 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 327 541 2.9E-46 T 11-11-2016 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 SHALO_RS00820 8f9d1503cfb982c031871fe4b91fcdd9 393 Pfam PF00909 Ammonium Transporter Family 14 385 1.6E-98 T 11-11-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 SHALO_RS00820 8f9d1503cfb982c031871fe4b91fcdd9 393 SUPERFAMILY SSF111352 9 365 3.01E-99 T 11-11-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 SHALO_RS00820 8f9d1503cfb982c031871fe4b91fcdd9 393 Gene3D G3DSA:1.10.3430.10 8 365 9.4E-102 T 11-11-2016 IPR029020 Ammonium/urea transporter SHALO_RS14605 689114525cf9c7300f7fbc27f6c9802f 287 TIGRFAM TIGR03590 PseG: UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase 1 258 7.3E-68 T 11-11-2016 IPR020023 UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase SHALO_RS14605 689114525cf9c7300f7fbc27f6c9802f 287 Gene3D G3DSA:3.40.50.2000 133 272 2.3E-8 T 11-11-2016 SHALO_RS14015 431b11326f0c373562c78dafb71ab5af 210 Gene3D G3DSA:3.30.70.20 109 147 7.8E-8 T 11-11-2016 SHALO_RS14015 431b11326f0c373562c78dafb71ab5af 210 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 173 184 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_RS14015 431b11326f0c373562c78dafb71ab5af 210 SUPERFAMILY SSF54862 63 185 4.81E-20 T 11-11-2016 SHALO_RS14015 431b11326f0c373562c78dafb71ab5af 210 Pfam PF12838 4Fe-4S dicluster domain 64 118 4.3E-8 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_RS14015 431b11326f0c373562c78dafb71ab5af 210 Pfam PF12838 4Fe-4S dicluster domain 145 185 1.2E-7 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHALO_RS14015 431b11326f0c373562c78dafb71ab5af 210 Gene3D G3DSA:3.30.70.20 148 186 8.9E-12 T 11-11-2016 SHALO_RS14015 431b11326f0c373562c78dafb71ab5af 210 Gene3D G3DSA:3.30.70.20 63 108 2.3E-10 T 11-11-2016 SHALO_RS14015 431b11326f0c373562c78dafb71ab5af 210 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 104 115 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHALO_RS12065 7eeea5942348f4b023ece76c21fbbf0e 361 SMART SM00228 286 352 4.8E-5 T 11-11-2016 IPR001478 PDZ domain GO:0005515 SHALO_RS12065 7eeea5942348f4b023ece76c21fbbf0e 361 SMART SM00228 183 251 0.13 T 11-11-2016 IPR001478 PDZ domain GO:0005515 SHALO_RS12065 7eeea5942348f4b023ece76c21fbbf0e 361 SUPERFAMILY SSF50156 285 360 1.21E-10 T 11-11-2016 IPR001478 PDZ domain GO:0005515 SHALO_RS12065 7eeea5942348f4b023ece76c21fbbf0e 361 Pfam PF13180 PDZ domain 185 251 8.7E-7 T 11-11-2016 IPR001478 PDZ domain GO:0005515 SHALO_RS12065 7eeea5942348f4b023ece76c21fbbf0e 361 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 293 346 2.6E-6 T 11-11-2016 IPR001478 PDZ domain GO:0005515 SHALO_RS12065 7eeea5942348f4b023ece76c21fbbf0e 361 SUPERFAMILY SSF50156 171 255 6.05E-9 T 11-11-2016 IPR001478 PDZ domain GO:0005515 SHALO_RS12065 7eeea5942348f4b023ece76c21fbbf0e 361 Gene3D G3DSA:2.30.42.10 185 252 3.3E-9 T 11-11-2016 IPR001478 PDZ domain GO:0005515 SHALO_RS12065 7eeea5942348f4b023ece76c21fbbf0e 361 Gene3D G3DSA:2.30.42.10 286 361 7.4E-11 T 11-11-2016 IPR001478 PDZ domain GO:0005515 SHALO_RS04835 4a2512482171e7cb7af94d06b35db219 286 PIRSF PIRSF018266 1 286 2.6E-57 T 11-11-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component SHALO_RS04835 4a2512482171e7cb7af94d06b35db219 286 Pfam PF16344 Domain of unknown function (DUF4974) 187 283 1.0E-10 T 11-11-2016 IPR032508 Protein FecR, C-terminal SHALO_RS04835 4a2512482171e7cb7af94d06b35db219 286 Pfam PF04773 FecR protein 85 172 3.5E-17 T 11-11-2016 IPR006860 FecR protein SHALO_RS10520 5cbce7f1dcf4918765dfc7f588b82570 396 Pfam PF03573 outer membrane porin, OprD family 79 333 1.1E-9 T 11-11-2016 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 SHALO_RS10520 5cbce7f1dcf4918765dfc7f588b82570 396 Gene3D G3DSA:2.40.160.10 33 396 2.1E-44 T 11-11-2016 IPR023614 Porin domain SHALO_RS03675 e95b783dbce4b24154ce65aff236513a 319 Pfam PF03595 Voltage-dependent anion channel 12 307 1.9E-56 T 11-11-2016 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 SHALO_RS08215 235a4bccb19b8966f9e5be8a9b3e902d 419 Pfam PF09861 Domain of unknown function (DUF2088) 7 205 5.7E-64 T 11-11-2016 IPR018657 Domain of unknown function DUF2088 SHALO_RS10620 f0cffb506bb7648ba5e3a2d84f1b9091 596 SUPERFAMILY SSF55073 425 582 1.65E-47 T 11-11-2016 IPR029787 Nucleotide cyclase SHALO_RS10620 f0cffb506bb7648ba5e3a2d84f1b9091 596 SMART SM00267 409 582 4.4E-52 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS10620 f0cffb506bb7648ba5e3a2d84f1b9091 596 Gene3D G3DSA:3.30.70.270 422 586 7.5E-51 T 11-11-2016 SHALO_RS10620 f0cffb506bb7648ba5e3a2d84f1b9091 596 Pfam PF00990 Diguanylate cyclase, GGDEF domain 421 577 1.9E-45 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS10620 f0cffb506bb7648ba5e3a2d84f1b9091 596 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 417 580 6.1E-51 T 11-11-2016 IPR000160 GGDEF domain SHALO_RS08645 5f0271b0c2379d38e8ebae9b67975747 730 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 23 725 2.1E-272 T 11-11-2016 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 SHALO_RS08645 5f0271b0c2379d38e8ebae9b67975747 730 Pfam PF00771 FHIPEP family 34 716 2.5E-250 T 11-11-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 SHALO_RS08645 5f0271b0c2379d38e8ebae9b67975747 730 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 150 173 - T 11-11-2016 IPR025505 FHIPEP conserved site SHALO_RS08645 5f0271b0c2379d38e8ebae9b67975747 730 PIRSF PIRSF005419 9 730 1.4E-231 T 11-11-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 SHALO_RS08645 5f0271b0c2379d38e8ebae9b67975747 730 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 164 182 4.1E-54 T 11-11-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 SHALO_RS08645 5f0271b0c2379d38e8ebae9b67975747 730 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 194 211 4.1E-54 T 11-11-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 SHALO_RS08645 5f0271b0c2379d38e8ebae9b67975747 730 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 41 54 4.1E-54 T 11-11-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 SHALO_RS08645 5f0271b0c2379d38e8ebae9b67975747 730 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 245 259 4.1E-54 T 11-11-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 SHALO_RS08645 5f0271b0c2379d38e8ebae9b67975747 730 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 78 97 4.1E-54 T 11-11-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 SHALO_RS08645 5f0271b0c2379d38e8ebae9b67975747 730 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 145 161 4.1E-54 T 11-11-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 SHALO_RS01640 904803494c06fcf24767870b1da425b1 62 Pfam PF05082 Rop-like 3 59 1.8E-11 T 11-11-2016 IPR007774 Putative nitrogen fixation protein SHALO_RS01640 904803494c06fcf24767870b1da425b1 62 Gene3D G3DSA:1.10.287.660 1 59 5.4E-13 T 11-11-2016 IPR029012 Helix hairpin bin domain SHALO_RS10915 b6cc40cb7cc68c566d5e2f81047608cb 133 SUPERFAMILY SSF51182 27 123 1.67E-17 T 11-11-2016 IPR011051 RmlC-like cupin domain SHALO_RS10915 b6cc40cb7cc68c566d5e2f81047608cb 133 Pfam PF07883 Cupin domain 54 121 2.9E-11 T 11-11-2016 IPR013096 Cupin 2, conserved barrel SHALO_RS10915 b6cc40cb7cc68c566d5e2f81047608cb 133 Gene3D G3DSA:2.60.120.10 15 123 1.2E-17 T 11-11-2016 IPR014710 RmlC-like jelly roll fold SHALO_RS03505 ff163046e4883e9bd8dd4648f1cfdb6c 205 Pfam PF13114 RecO N terminal 1 72 5.1E-33 T 11-11-2016 IPR022572 DNA replication/recombination mediator RecO, N-terminal SHALO_RS06310 4e7d08ed5722461c49869144861e34ed 199 Pfam PF12900 Pyridoxamine 5'-phosphate oxidase 11 161 2.9E-17 T 11-11-2016 IPR024747 Pyridoxamine 5'-phosphate oxidase-related SHALO_RS06310 4e7d08ed5722461c49869144861e34ed 199 Gene3D G3DSA:2.30.110.10 1 164 4.7E-39 T 11-11-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 SHALO_RS06310 4e7d08ed5722461c49869144861e34ed 199 SUPERFAMILY SSF50475 1 173 3.54E-35 T 11-11-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 SHALO_RS01225 beaea6cb4e592d3ee2720f65d7b8c44a 261 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 2 261 36.395 T 11-11-2016 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 SHALO_RS01225 beaea6cb4e592d3ee2720f65d7b8c44a 261 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 3 248 8.8E-69 T 11-11-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 SHALO_RS01225 beaea6cb4e592d3ee2720f65d7b8c44a 261 Pfam PF01975 Survival protein SurE 4 196 7.3E-55 T 11-11-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 SHALO_RS01225 beaea6cb4e592d3ee2720f65d7b8c44a 261 SUPERFAMILY SSF64167 3 260 2.09E-78 T 11-11-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 SHALO_RS01225 beaea6cb4e592d3ee2720f65d7b8c44a 261 Gene3D G3DSA:3.40.1210.10 2 260 1.4E-82 T 11-11-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 SHALO_RS12665 db0a58f523e2bf78ac6f09c50b377709 417 SUPERFAMILY SSF81296 38 166 1.82E-20 T 11-11-2016 IPR014756 Immunoglobulin E-set SHALO_RS12665 db0a58f523e2bf78ac6f09c50b377709 417 Gene3D G3DSA:3.40.50.1820 163 411 4.2E-58 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold SHALO_RS12665 db0a58f523e2bf78ac6f09c50b377709 417 SUPERFAMILY SSF53474 169 409 1.71E-38 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold SHALO_RS12665 db0a58f523e2bf78ac6f09c50b377709 417 Gene3D G3DSA:2.60.40.10 37 147 8.1E-20 T 11-11-2016 IPR013783 Immunoglobulin-like fold SHALO_RS12665 db0a58f523e2bf78ac6f09c50b377709 417 Pfam PF11806 Domain of unknown function (DUF3327) 65 170 2.2E-15 T 11-11-2016 IPR021764 Enterochelin esterase, N-terminal GO:0005506|GO:0005737|GO:0006826|GO:0008849 SHALO_RS12665 db0a58f523e2bf78ac6f09c50b377709 417 Pfam PF00756 Putative esterase 188 408 4.1E-23 T 11-11-2016 IPR000801 Putative esterase Reactome: R-HSA-156590 SHALO_RS05945 37725b52c7c9109c1ff6daa599d217cf 207 SUPERFAMILY SSF52540 2 206 8.68E-55 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS05945 37725b52c7c9109c1ff6daa599d217cf 207 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHALO_RS05945 37725b52c7c9109c1ff6daa599d217cf 207 Pfam PF00005 ABC transporter 17 157 2.2E-30 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_RS05945 37725b52c7c9109c1ff6daa599d217cf 207 Gene3D G3DSA:3.40.50.300 1 206 9.7E-59 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS05945 37725b52c7c9109c1ff6daa599d217cf 207 SMART SM00382 26 205 7.6E-14 T 11-11-2016 IPR003593 AAA+ ATPase domain SHALO_RS08955 6ab8f5f616c4be8cc22f93d607fe7d43 62 Pfam PF08410 Domain of unknown function (DUF1737) 2 50 1.7E-23 T 11-11-2016 IPR013619 Domain of unknown function DUF1737 SHALO_RS11500 1acef4cac54697c5886db39c46107b54 376 Pfam PF03916 Polysulphide reductase, NrfD 17 318 8.8E-43 T 11-11-2016 IPR005614 NrfD family SHALO_RS07085 b43ddc1129b89fd86bf678824a378555 705 SUPERFAMILY SSF56935 55 702 4.12E-105 T 11-11-2016 SHALO_RS07085 b43ddc1129b89fd86bf678824a378555 705 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 65 702 7.1E-91 T 11-11-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 SHALO_RS07085 b43ddc1129b89fd86bf678824a378555 705 Pfam PF07715 TonB-dependent Receptor Plug Domain 64 163 4.7E-17 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SHALO_RS07085 b43ddc1129b89fd86bf678824a378555 705 Pfam PF00593 TonB dependent receptor 468 699 2.2E-18 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SHALO_RS07085 b43ddc1129b89fd86bf678824a378555 705 Gene3D G3DSA:2.170.130.10 34 174 3.0E-30 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 SHALO_RS07085 b43ddc1129b89fd86bf678824a378555 705 Gene3D G3DSA:2.40.170.20 179 702 2.8E-94 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 SHALO_RS13590 e39d87ddbaaca3550a797b23dd6a55f4 202 Pfam PF01965 DJ-1/PfpI family 4 179 1.3E-23 T 11-11-2016 IPR002818 DJ-1/PfpI SHALO_RS13590 e39d87ddbaaca3550a797b23dd6a55f4 202 Gene3D G3DSA:3.40.50.880 4 200 2.5E-56 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like SHALO_RS13590 e39d87ddbaaca3550a797b23dd6a55f4 202 SUPERFAMILY SSF52317 4 198 1.42E-50 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like SHALO_RS06445 3cff8ddcb895bebdd3863c411affd4e2 144 Pfam PF07681 DoxX 14 94 4.9E-17 T 11-11-2016 IPR032808 DoxX family SHALO_RS02795 4bde16eae9b87f0179dc56378aae72ec 136 Pfam PF01627 Hpt domain 43 96 1.4E-5 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SHALO_RS02795 4bde16eae9b87f0179dc56378aae72ec 136 SUPERFAMILY SSF47226 11 120 2.09E-17 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SHALO_RS02795 4bde16eae9b87f0179dc56378aae72ec 136 Gene3D G3DSA:1.20.120.160 12 116 2.2E-15 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 SHALO_RS12610 db486dcd0d5c1f15c928fa599a8583b9 519 Pfam PF03929 PepSY-associated TM region 13 370 1.5E-33 T 11-11-2016 IPR005625 PepSY-associated TM protein SHALO_RS13145 3dc874baf1ab06ae37252b0c40c480e7 320 Pfam PF03916 Polysulphide reductase, NrfD 13 318 3.4E-62 T 11-11-2016 IPR005614 NrfD family SHALO_RS13145 3dc874baf1ab06ae37252b0c40c480e7 320 Gene3D G3DSA:1.20.1630.10 17 317 1.6E-7 T 11-11-2016 SHALO_RS09150 c157607eb605ad8d51aa43bebc750769 544 Gene3D G3DSA:3.10.20.310 68 148 2.3E-21 T 11-11-2016 SHALO_RS09150 c157607eb605ad8d51aa43bebc750769 544 Gene3D G3DSA:2.40.160.50 174 544 5.9E-73 T 11-11-2016 SHALO_RS09150 c157607eb605ad8d51aa43bebc750769 544 Pfam PF08479 POTRA domain, ShlB-type 73 148 6.2E-25 T 11-11-2016 IPR013686 Polypeptide-transport-associated, ShlB-type SHALO_RS09150 c157607eb605ad8d51aa43bebc750769 544 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 167 525 3.2E-16 T 11-11-2016 IPR005565 Haemolysin activator HlyB SHALO_RS09150 c157607eb605ad8d51aa43bebc750769 544 PIRSF PIRSF029745 2 544 4.1E-118 T 11-11-2016 IPR027282 Two partner secretion pathway transporter GO:0015031 SHALO_RS05600 b4804c760eddf130fed036e7e5ad7714 170 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 103 9.6E-16 T 11-11-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 SHALO_RS05600 b4804c760eddf130fed036e7e5ad7714 170 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 4 97 2.6E-17 T 11-11-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 SHALO_RS05600 b4804c760eddf130fed036e7e5ad7714 170 SUPERFAMILY SSF69754 1 105 1.7E-20 T 11-11-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 SHALO_RS05600 b4804c760eddf130fed036e7e5ad7714 170 Pfam PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus 116 169 6.5E-13 T 11-11-2016 IPR032528 Sigma 54 modulation/S30EA ribosomal protein, C-terminal SHALO_RS05600 b4804c760eddf130fed036e7e5ad7714 170 Gene3D G3DSA:3.30.160.100 1 98 1.5E-19 T 11-11-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 SHALO_RS06945 cf7b3379bdfbe0884f5e788f298c3e1f 363 Gene3D G3DSA:3.20.20.300 27 355 1.9E-63 T 11-11-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 SHALO_RS06945 cf7b3379bdfbe0884f5e788f298c3e1f 363 SUPERFAMILY SSF51445 27 356 1.68E-50 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily SHALO_RS06945 cf7b3379bdfbe0884f5e788f298c3e1f 363 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 22 350 9.9E-49 T 11-11-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 SHALO_RS14255 c58c384a80f7ab4ef60c978c2bb7b899 394 Pfam PF02321 Outer membrane efflux protein 20 147 3.9E-8 T 11-11-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SHALO_RS14255 c58c384a80f7ab4ef60c978c2bb7b899 394 Pfam PF02321 Outer membrane efflux protein 221 391 8.6E-11 T 11-11-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 SHALO_RS14255 c58c384a80f7ab4ef60c978c2bb7b899 394 Gene3D G3DSA:1.20.1600.10 19 391 2.4E-19 T 11-11-2016 SHALO_RS14255 c58c384a80f7ab4ef60c978c2bb7b899 394 SUPERFAMILY SSF56954 5 392 4.71E-31 T 11-11-2016 SHALO_RS02285 211dd74c60724c3c64b72d3adc706ea1 278 Pfam PF14336 Domain of unknown function (DUF4392) 7 271 2.1E-64 T 11-11-2016 IPR025504 Domain of unknown function DUF4392 SHALO_RS11815 d99c81c0865bb5d4eb5a724d0ee1c818 136 Pfam PF04120 Low affinity iron permease 9 126 5.1E-50 T 11-11-2016 IPR007251 Low affinity iron permease, Fet4 GO:0055085 SHALO_RS08090 869c5d441698b90d8785d63e6f0ecb92 442 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 40 427 3.3E-69 T 11-11-2016 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 SHALO_RS08090 869c5d441698b90d8785d63e6f0ecb92 442 Gene3D G3DSA:3.40.50.1980 40 172 2.6E-33 T 11-11-2016 SHALO_RS08090 869c5d441698b90d8785d63e6f0ecb92 442 SUPERFAMILY SSF53807 18 437 3.27E-86 T 11-11-2016 SHALO_RS08090 869c5d441698b90d8785d63e6f0ecb92 442 Gene3D G3DSA:3.40.50.1980 173 279 3.0E-23 T 11-11-2016 SHALO_RS08090 869c5d441698b90d8785d63e6f0ecb92 442 Gene3D G3DSA:3.40.50.1980 308 442 1.2E-17 T 11-11-2016 SHALO_RS10585 8cb1ef59fcd5703e516719c6097b8af4 203 Pfam PF13599 Pentapeptide repeats (9 copies) 104 165 5.2E-11 T 11-11-2016 IPR001646 Pentapeptide repeat SHALO_RS10585 8cb1ef59fcd5703e516719c6097b8af4 203 Pfam PF13599 Pentapeptide repeats (9 copies) 32 95 1.4E-11 T 11-11-2016 IPR001646 Pentapeptide repeat SHALO_RS10585 8cb1ef59fcd5703e516719c6097b8af4 203 SUPERFAMILY SSF141571 18 202 7.36E-43 T 11-11-2016 SHALO_RS12495 215e5e9b52d565da4bac4b2cc9eeef73 75 Pfam PF03994 Domain of Unknown Function (DUF350) 20 71 2.3E-6 T 11-11-2016 IPR007140 Protein of unknown function DUF350 SHALO_RS10540 1f15e5cbf0b6c9c8585cd664b3c0a4fa 149 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 5 136 2.1E-17 T 11-11-2016 IPR009936 Protein of unknown function DUF1468 SHALO_RS04970 947586aed98e4f89f96ec500f95a5079 535 Pfam PF12729 Four helix bundle sensory module for signal transduction 1 175 8.7E-23 T 11-11-2016 IPR024478 4HB MCP domain SHALO_RS04970 947586aed98e4f89f96ec500f95a5079 535 Gene3D G3DSA:1.10.287.950 294 525 2.0E-44 T 11-11-2016 SHALO_RS04970 947586aed98e4f89f96ec500f95a5079 535 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 345 534 5.2E-41 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SHALO_RS04970 947586aed98e4f89f96ec500f95a5079 535 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 1 13 4.0E-20 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SHALO_RS04970 947586aed98e4f89f96ec500f95a5079 535 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 372 399 4.0E-20 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SHALO_RS04970 947586aed98e4f89f96ec500f95a5079 535 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 401 430 4.0E-20 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 SHALO_RS04970 947586aed98e4f89f96ec500f95a5079 535 SMART SM00283 274 535 1.2E-40 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SHALO_RS04970 947586aed98e4f89f96ec500f95a5079 535 SUPERFAMILY SSF58104 228 534 9.59E-56 T 11-11-2016 SHALO_RS02615 5e7deebed98f8bb0868f7318952f24a7 365 Pfam PF03734 L,D-transpeptidase catalytic domain 135 239 1.6E-9 T 11-11-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 SHALO_RS02615 5e7deebed98f8bb0868f7318952f24a7 365 Gene3D G3DSA:2.40.440.10 111 240 1.0E-8 T 11-11-2016 SHALO_RS02615 5e7deebed98f8bb0868f7318952f24a7 365 SUPERFAMILY SSF141523 133 240 1.14E-10 T 11-11-2016 SHALO_RS04945 9d9707c73fbd6067c2909a710fd7374c 533 SUPERFAMILY SSF58104 223 532 9.55E-51 T 11-11-2016 SHALO_RS04945 9d9707c73fbd6067c2909a710fd7374c 533 Gene3D G3DSA:1.10.287.950 286 444 3.8E-40 T 11-11-2016 SHALO_RS04945 9d9707c73fbd6067c2909a710fd7374c 533 Gene3D G3DSA:1.10.287.950 487 526 3.8E-40 T 11-11-2016 SHALO_RS04945 9d9707c73fbd6067c2909a710fd7374c 533 SMART SM00283 270 531 2.1E-38 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SHALO_RS04945 9d9707c73fbd6067c2909a710fd7374c 533 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 335 530 1.0E-38 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SHALO_RS12930 ad2faf664623853956b5fb0e21f48260 170 SUPERFAMILY SSF53146 2 108 1.7E-17 T 11-11-2016 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis SHALO_RS12930 ad2faf664623853956b5fb0e21f48260 170 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 12 97 7.5E-13 T 11-11-2016 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis SHALO_RS12930 ad2faf664623853956b5fb0e21f48260 170 Gene3D G3DSA:3.30.420.130 2 107 5.8E-20 T 11-11-2016 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis SHALO_RS01695 e1119de7fd918c8836a6eeefc7f58897 204 Gene3D G3DSA:3.60.21.10 3 203 1.5E-29 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like SHALO_RS01695 e1119de7fd918c8836a6eeefc7f58897 204 SUPERFAMILY SSF56300 3 181 4.37E-15 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like SHALO_RS03655 2ce57e84ac1303f387ed03ae11731780 180 Hamap MF_01521 Probable manganese efflux pump MntP [mntP]. 1 180 23.332 T 11-11-2016 IPR022929 Putative manganese efflux pump MntP SHALO_RS03655 2ce57e84ac1303f387ed03ae11731780 180 Pfam PF02659 Putative manganese efflux pump 33 178 2.6E-46 T 11-11-2016 IPR003810 Putative manganese efflux pump SHALO_RS06690 46501a2997320b19691ae40e178a37ed 403 TIGRFAM TIGR02358 thia_cytX: putative hydroxymethylpyrimidine transporter CytX 13 388 9.4E-121 T 11-11-2016 IPR012732 Hydroxymethylpyrimidine transporter CytX SHALO_RS06690 46501a2997320b19691ae40e178a37ed 403 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 3 344 1.3E-32 T 11-11-2016 IPR001248 Purine-cytosine permease GO:0005215|GO:0016020|GO:0055085 SHALO_RS06315 e39d0ad3345d78f10208d42fc4583745 294 PIRSF PIRSF028696 21 294 2.5E-31 T 11-11-2016 IPR016896 Protein of unknown function DUF2860 SHALO_RS06315 e39d0ad3345d78f10208d42fc4583745 294 Pfam PF11059 Protein of unknown function (DUF2860) 25 293 3.1E-35 T 11-11-2016 IPR016896 Protein of unknown function DUF2860 SHALO_RS02800 5917483d788023fc91eda64e7ace7b00 246 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 33 46 - T 11-11-2016 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 SHALO_RS02800 5917483d788023fc91eda64e7ace7b00 246 Pfam PF00290 Tryptophan synthase alpha chain 2 241 6.6E-71 T 11-11-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 SHALO_RS02800 5917483d788023fc91eda64e7ace7b00 246 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 3 228 2.8E-62 T 11-11-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 SHALO_RS02800 5917483d788023fc91eda64e7ace7b00 246 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 2 243 28.533 T 11-11-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 SHALO_RS02800 5917483d788023fc91eda64e7ace7b00 246 Gene3D G3DSA:3.20.20.70 2 245 1.4E-79 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHALO_RS02800 5917483d788023fc91eda64e7ace7b00 246 SUPERFAMILY SSF51366 3 224 8.85E-67 T 11-11-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 SHALO_RS07280 69eb1def3ca4bb4590793749e76296e6 637 Pfam PF03961 Protein of unknown function (DUF342) 144 614 3.0E-39 T 11-11-2016 IPR005646 Protein of unknown function DUF342 SHALO_RS13755 031fba67de3e55ae808d58df8bdfd696 234 Pfam PF09347 Domain of unknown function (DUF1989) 10 183 7.9E-45 T 11-11-2016 IPR018959 Domain of unknown function DUF1989 SHALO_RS13755 031fba67de3e55ae808d58df8bdfd696 234 TIGRFAM TIGR03425 urea_degr_2: urea carboxylase-associated protein 2 7 234 6.1E-79 T 11-11-2016 IPR017792 Urea carboxylase-associated protein 2 SHALO_RS02530 26ccf9cf233f7547c9e0f1de6a24b2d2 483 Gene3D G3DSA:1.10.287.950 175 365 1.6E-43 T 11-11-2016 SHALO_RS02530 26ccf9cf233f7547c9e0f1de6a24b2d2 483 Pfam PF13682 Chemoreceptor zinc-binding domain 373 436 9.3E-11 T 11-11-2016 IPR025991 Chemoreceptor zinc-binding domain SHALO_RS02530 26ccf9cf233f7547c9e0f1de6a24b2d2 483 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 230 363 5.3E-34 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SHALO_RS02530 26ccf9cf233f7547c9e0f1de6a24b2d2 483 SMART SM00283 151 394 8.4E-27 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SHALO_RS02530 26ccf9cf233f7547c9e0f1de6a24b2d2 483 SUPERFAMILY SSF58104 166 373 3.53E-47 T 11-11-2016 SHALO_RS02530 26ccf9cf233f7547c9e0f1de6a24b2d2 483 SUPERFAMILY SSF58104 94 117 3.53E-47 T 11-11-2016 SHALO_RS06595 8e88d918b669e85340c04a68f275002b 66 Pfam PF04328 Protein of unknown function (DUF466) 5 66 7.9E-29 T 11-11-2016 IPR007423 Protein of unknown function DUF466 SHALO_RS05610 ea7d9c2a290cc74ab623c3d0a7864027 295 SUPERFAMILY SSF54523 6 106 1.57E-6 T 11-11-2016 SHALO_RS05610 ea7d9c2a290cc74ab623c3d0a7864027 295 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 25 1.3E-6 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site SHALO_RS05610 ea7d9c2a290cc74ab623c3d0a7864027 295 Pfam PF07963 Prokaryotic N-terminal methylation motif 4 22 2.6E-4 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site SHALO_RS04955 df87c1db09fe100925e4972f2f9946cc 255 Gene3D G3DSA:3.40.50.150 20 243 3.9E-41 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS04955 df87c1db09fe100925e4972f2f9946cc 255 Pfam PF08241 Methyltransferase domain 38 128 9.6E-23 T 11-11-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 SHALO_RS04955 df87c1db09fe100925e4972f2f9946cc 255 SUPERFAMILY SSF53335 21 208 4.45E-37 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS02280 aa0465939d20e64a1a20721c218fd8eb 140 ProSitePatterns PS00194 Thioredoxin family active site. 57 75 - T 11-11-2016 IPR017937 Thioredoxin, conserved site GO:0045454 SHALO_RS02280 aa0465939d20e64a1a20721c218fd8eb 140 SUPERFAMILY SSF52833 28 140 3.31E-36 T 11-11-2016 IPR012336 Thioredoxin-like fold SHALO_RS02280 aa0465939d20e64a1a20721c218fd8eb 140 TIGRFAM TIGR01068 thioredoxin: thioredoxin 45 138 7.3E-32 T 11-11-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 SHALO_RS02280 aa0465939d20e64a1a20721c218fd8eb 140 Gene3D G3DSA:3.40.30.10 37 138 1.1E-33 T 11-11-2016 IPR012336 Thioredoxin-like fold SHALO_RS02280 aa0465939d20e64a1a20721c218fd8eb 140 PRINTS PR00421 Thioredoxin family signature 104 115 1.9E-8 T 11-11-2016 SHALO_RS02280 aa0465939d20e64a1a20721c218fd8eb 140 PRINTS PR00421 Thioredoxin family signature 56 64 1.9E-8 T 11-11-2016 SHALO_RS02280 aa0465939d20e64a1a20721c218fd8eb 140 PRINTS PR00421 Thioredoxin family signature 64 73 1.9E-8 T 11-11-2016 SHALO_RS02280 aa0465939d20e64a1a20721c218fd8eb 140 Pfam PF00085 Thioredoxin 41 137 4.4E-28 T 11-11-2016 IPR013766 Thioredoxin domain GO:0045454 SHALO_RS09410 959178574b51c2bc51023a0b7377c865 102 SUPERFAMILY SSF81301 4 86 2.72E-11 T 11-11-2016 SHALO_RS09410 959178574b51c2bc51023a0b7377c865 102 Gene3D G3DSA:3.30.460.10 2 101 2.4E-14 T 11-11-2016 SHALO_RS09410 959178574b51c2bc51023a0b7377c865 102 Pfam PF01909 Nucleotidyltransferase domain 27 101 6.4E-10 T 11-11-2016 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 SHALO_RS08550 a8519893cbd5c6517664836f08135fe7 299 Hamap MF_01590 tRNA U34 carboxymethyltransferase [cmoB]. 1 299 47.755 T 11-11-2016 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 SHALO_RS08550 a8519893cbd5c6517664836f08135fe7 299 SUPERFAMILY SSF53335 89 285 2.81E-25 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS08550 a8519893cbd5c6517664836f08135fe7 299 TIGRFAM TIGR00452 TIGR00452: tRNA (mo5U34)-methyltransferase 15 297 4.3E-95 T 11-11-2016 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 SHALO_RS08550 a8519893cbd5c6517664836f08135fe7 299 Gene3D G3DSA:3.40.50.150 82 251 2.6E-22 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS08550 a8519893cbd5c6517664836f08135fe7 299 Pfam PF08003 Protein of unknown function (DUF1698) 15 298 1.1E-87 T 11-11-2016 IPR027555 tRNA (mo5U34)-methyltransferase-like SHALO_RS08230 5477de03aece986b454f587a0b815761 450 PIRSF PIRSF004539 1 448 4.5E-170 T 11-11-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 SHALO_RS08230 5477de03aece986b454f587a0b815761 450 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 5 447 7.7E-154 T 11-11-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 SHALO_RS08230 5477de03aece986b454f587a0b815761 450 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 380 4.0E-137 T 11-11-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 SHALO_RS06960 d8f9cffe9c15e07d2af302ca7ce272d9 341 Pfam PF03739 Predicted permease YjgP/YjgQ family 6 318 1.4E-35 T 11-11-2016 IPR005495 Permease LptG/LptF-related GO:0016021 SHALO_RS14585 b11f6bdb91e34ac4913604ee525998cc 239 Gene3D G3DSA:1.20.1330.10 50 216 8.5E-18 T 11-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SHALO_RS14585 b11f6bdb91e34ac4913604ee525998cc 239 Pfam PF00669 Bacterial flagellin N-terminal helical region 37 135 1.0E-13 T 11-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SHALO_RS14585 b11f6bdb91e34ac4913604ee525998cc 239 SUPERFAMILY SSF64518 9 231 4.32E-18 T 11-11-2016 SHALO_RS07775 163895dee6b2496bcbf24770816bf5df 72 Gene3D G3DSA:1.10.260.40 4 41 3.8E-7 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SHALO_RS07775 163895dee6b2496bcbf24770816bf5df 72 SUPERFAMILY SSF47413 5 55 5.35E-6 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SHALO_RS08135 6570189f1fde991fc37fad25a4b898e9 194 Pfam PF02223 Thymidylate kinase 5 188 8.5E-31 T 11-11-2016 SHALO_RS08135 6570189f1fde991fc37fad25a4b898e9 194 Hamap MF_00165 Thymidylate kinase [tmk]. 1 192 18.044 T 11-11-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 SHALO_RS08135 6570189f1fde991fc37fad25a4b898e9 194 SUPERFAMILY SSF52540 1 193 5.22E-29 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS08135 6570189f1fde991fc37fad25a4b898e9 194 Gene3D G3DSA:3.40.50.300 1 192 6.2E-36 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS08135 6570189f1fde991fc37fad25a4b898e9 194 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 1 188 1.3E-36 T 11-11-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 SHALO_RS03590 e74f00564ccc4501efcf6782a8d020fd 160 PIRSF PIRSF004633 1 160 3.0E-46 T 11-11-2016 IPR014419 Heme utilization protein with pyridoxamine 5'-phosphate domain SHALO_RS03590 e74f00564ccc4501efcf6782a8d020fd 160 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 1 87 6.8E-13 T 11-11-2016 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 SHALO_RS03590 e74f00564ccc4501efcf6782a8d020fd 160 SUPERFAMILY SSF50475 2 144 7.48E-27 T 11-11-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 SHALO_RS03590 e74f00564ccc4501efcf6782a8d020fd 160 Gene3D G3DSA:2.30.110.10 2 135 7.9E-33 T 11-11-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 SHALO_RS09665 1c5f0b00d9c26c9f6a6714314dce6b2e 273 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 27 251 2.2E-53 T 11-11-2016 SHALO_RS09665 1c5f0b00d9c26c9f6a6714314dce6b2e 273 SUPERFAMILY SSF53850 23 268 1.98E-33 T 11-11-2016 SHALO_RS09665 1c5f0b00d9c26c9f6a6714314dce6b2e 273 Gene3D G3DSA:3.40.190.10 117 236 2.4E-17 T 11-11-2016 SHALO_RS09665 1c5f0b00d9c26c9f6a6714314dce6b2e 273 TIGRFAM TIGR01098 3A0109s03R: phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein 20 245 6.2E-42 T 11-11-2016 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein GO:0043190|GO:0055085 SHALO_RS09070 e1c74a0da33b8dfe09eb11ec9c4dc7ef 606 Pfam PF02705 K+ potassium transporter 14 541 2.1E-155 T 11-11-2016 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 SHALO_RS15120 98fa24890a6947c1beefd4ad0386356c 150 Pfam PF03748 Flagellar basal body-associated protein FliL 57 147 1.5E-13 T 11-11-2016 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 SHALO_RS08650 be8dae453b52ba1d7bb2f82a5d0ce124 341 SUPERFAMILY SSF64182 9 321 8.72E-15 T 11-11-2016 SHALO_RS10790 93d9f79cc35783101f43032ed085c891 376 Hamap MF_02040 Iron-sulfur cluster carrier protein. 92 341 35.586 T 11-11-2016 IPR019591 Mrp/NBP35 ATP-binding protein SHALO_RS10790 93d9f79cc35783101f43032ed085c891 376 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 98 340 8.8E-95 T 11-11-2016 IPR019591 Mrp/NBP35 ATP-binding protein SHALO_RS10790 93d9f79cc35783101f43032ed085c891 376 Pfam PF01883 Domain of unknown function DUF59 4 71 1.3E-9 T 11-11-2016 IPR002744 Domain of unknown function DUF59 SHALO_RS10790 93d9f79cc35783101f43032ed085c891 376 SUPERFAMILY SSF52540 101 351 8.54E-58 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS10790 93d9f79cc35783101f43032ed085c891 376 SUPERFAMILY SSF117916 1 92 2.84E-13 T 11-11-2016 SHALO_RS10790 93d9f79cc35783101f43032ed085c891 376 Gene3D G3DSA:3.40.50.300 87 339 5.2E-94 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS12965 dca5c153b02994bade42e67fcf99e976 439 Pfam PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component 78 426 5.6E-82 T 11-11-2016 IPR010327 FldB/FldC dehydratase alpha/beta subunit SHALO_RS08540 bc0579f683c88588caea13224459418d 429 PRINTS PR00934 X-His dipeptidase (M25) signature 78 96 5.1E-9 T 11-11-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 SHALO_RS08540 bc0579f683c88588caea13224459418d 429 PRINTS PR00934 X-His dipeptidase (M25) signature 219 238 5.1E-9 T 11-11-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 SHALO_RS08540 bc0579f683c88588caea13224459418d 429 SUPERFAMILY SSF53187 1 154 2.46E-38 T 11-11-2016 SHALO_RS08540 bc0579f683c88588caea13224459418d 429 SUPERFAMILY SSF53187 342 426 2.46E-38 T 11-11-2016 SHALO_RS08540 bc0579f683c88588caea13224459418d 429 Pfam PF01546 Peptidase family M20/M25/M40 57 425 1.3E-8 T 11-11-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 SHALO_RS08540 bc0579f683c88588caea13224459418d 429 Gene3D G3DSA:3.40.630.10 343 428 1.0E-58 T 11-11-2016 SHALO_RS08540 bc0579f683c88588caea13224459418d 429 Gene3D G3DSA:3.40.630.10 2 153 1.0E-58 T 11-11-2016 SHALO_RS04490 956097993731d4b89ff3028dd5fc4cc5 216 Gene3D G3DSA:3.90.1720.10 38 163 5.8E-6 T 11-11-2016 IPR000064 Endopeptidase, NLPC/P60 domain SHALO_RS02500 e4a626169c0541cf07184d49581b7ceb 450 Pfam PF01554 MatE 248 400 9.7E-26 T 11-11-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 SHALO_RS02500 e4a626169c0541cf07184d49581b7ceb 450 Pfam PF01554 MatE 21 181 8.9E-26 T 11-11-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 SHALO_RS02500 e4a626169c0541cf07184d49581b7ceb 450 PIRSF PIRSF006603 1 447 1.6E-96 T 11-11-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 SHALO_RS02500 e4a626169c0541cf07184d49581b7ceb 450 TIGRFAM TIGR00797 matE: MATE efflux family protein 23 420 5.0E-59 T 11-11-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 SHALO_RS13130 dd50070f0674469702b1d8cf9a5ff442 287 Pfam PF05573 NosL 36 138 3.4E-12 T 11-11-2016 IPR008719 Nitrous oxide reductase accessory protein NosL SHALO_RS13130 dd50070f0674469702b1d8cf9a5ff442 287 Pfam PF05573 NosL 164 284 6.9E-30 T 11-11-2016 IPR008719 Nitrous oxide reductase accessory protein NosL SHALO_RS13130 dd50070f0674469702b1d8cf9a5ff442 287 SUPERFAMILY SSF160387 189 286 7.59E-26 T 11-11-2016 SHALO_RS13130 dd50070f0674469702b1d8cf9a5ff442 287 SUPERFAMILY SSF160387 57 150 6.54E-23 T 11-11-2016 SHALO_RS14195 4354dace230254d3ff22af557b8898c2 210 SUPERFAMILY SSF48695 29 174 1.47E-19 T 11-11-2016 IPR011031 Multihaem cytochrome SHALO_RS14195 4354dace230254d3ff22af557b8898c2 210 Gene3D G3DSA:1.10.3820.10 10 174 1.2E-21 T 11-11-2016 SHALO_RS14195 4354dace230254d3ff22af557b8898c2 210 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 12 175 4.2E-38 T 11-11-2016 IPR005126 NapC/NirT cytochrome c, N-terminal SHALO_RS05385 727ece23f00811dcb30c0b40e7c81c9b 128 SUPERFAMILY SSF69118 4 120 1.25E-33 T 11-11-2016 IPR029032 AhpD-like Reactome: R-HSA-5628897 SHALO_RS05385 727ece23f00811dcb30c0b40e7c81c9b 128 Pfam PF02627 Carboxymuconolactone decarboxylase family 33 118 9.9E-21 T 11-11-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 SHALO_RS05385 727ece23f00811dcb30c0b40e7c81c9b 128 Gene3D G3DSA:1.20.1290.10 2 125 3.5E-40 T 11-11-2016 IPR029032 AhpD-like Reactome: R-HSA-5628897 SHALO_RS01145 dde1bf2a1e521f8296ba29d1e8a84c23 472 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 246 253 - T 11-11-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 SHALO_RS01145 dde1bf2a1e521f8296ba29d1e8a84c23 472 SUPERFAMILY SSF53720 3 471 3.8E-133 T 11-11-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 SHALO_RS01145 dde1bf2a1e521f8296ba29d1e8a84c23 472 Pfam PF00171 Aldehyde dehydrogenase family 18 469 3.0E-139 T 11-11-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 SHALO_RS01145 dde1bf2a1e521f8296ba29d1e8a84c23 472 Gene3D G3DSA:3.40.309.10 260 443 7.3E-58 T 11-11-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 SHALO_RS01145 dde1bf2a1e521f8296ba29d1e8a84c23 472 Gene3D G3DSA:3.40.605.10 2 259 2.5E-68 T 11-11-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 SHALO_RS04735 593b29ef5b44cc6e7a175428c23320d2 90 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 13 81 2.3E-8 T 11-11-2016 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 SHALO_RS04735 593b29ef5b44cc6e7a175428c23320d2 90 TIGRFAM TIGR02229 caa3_sub_IV: caa(3)-type oxidase, subunit IV 6 88 1.1E-11 T 11-11-2016 IPR011743 Caa(3)-type oxidase, subunit IV SHALO_RS10210 7ab72627cb32b1d88d6c6598e4e78640 81 Pfam PF13083 KH domain 4 76 1.3E-18 T 11-11-2016 SHALO_RS10210 7ab72627cb32b1d88d6c6598e4e78640 81 Gene3D G3DSA:3.30.300.120 4 74 2.0E-6 T 11-11-2016 SHALO_RS12195 a9cdb63977225c3bd24a7f07cd2cc617 141 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 11-11-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_RS12195 a9cdb63977225c3bd24a7f07cd2cc617 141 SUPERFAMILY SSF54686 1 138 2.09E-55 T 11-11-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 SHALO_RS12195 a9cdb63977225c3bd24a7f07cd2cc617 141 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 126 2.1E-57 T 11-11-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS12195 a9cdb63977225c3bd24a7f07cd2cc617 141 Gene3D G3DSA:3.90.1170.10 24 139 8.2E-53 T 11-11-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 SHALO_RS12195 a9cdb63977225c3bd24a7f07cd2cc617 141 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 37.551 T 11-11-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS12195 a9cdb63977225c3bd24a7f07cd2cc617 141 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 5.3E-48 T 11-11-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 SHALO_RS12195 a9cdb63977225c3bd24a7f07cd2cc617 141 PRINTS PR00060 Ribosomal protein L16 signature 24 36 5.2E-36 T 11-11-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS12195 a9cdb63977225c3bd24a7f07cd2cc617 141 PRINTS PR00060 Ribosomal protein L16 signature 42 53 5.2E-36 T 11-11-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS12195 a9cdb63977225c3bd24a7f07cd2cc617 141 PRINTS PR00060 Ribosomal protein L16 signature 88 117 5.2E-36 T 11-11-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS12195 a9cdb63977225c3bd24a7f07cd2cc617 141 PRINTS PR00060 Ribosomal protein L16 signature 58 87 5.2E-36 T 11-11-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SHALO_RS15025 927f76ea6d7d2feeacb1861bc104f688 421 Pfam PF03916 Polysulphide reductase, NrfD 82 357 2.1E-11 T 11-11-2016 IPR005614 NrfD family SHALO_RS10560 e4c818061e16d13b29f89fca346206ab 381 SUPERFAMILY SSF103473 5 378 1.44E-49 T 11-11-2016 IPR020846 Major facilitator superfamily domain SHALO_RS10560 e4c818061e16d13b29f89fca346206ab 381 Pfam PF07690 Major Facilitator Superfamily 10 255 2.1E-25 T 11-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SHALO_RS10560 e4c818061e16d13b29f89fca346206ab 381 Gene3D G3DSA:1.20.1250.20 190 379 1.8E-16 T 11-11-2016 SHALO_RS10560 e4c818061e16d13b29f89fca346206ab 381 Gene3D G3DSA:1.20.1250.20 5 183 6.1E-23 T 11-11-2016 SHALO_RS12550 b2ffecae140a4cc1ba7e94bb065a6cf5 551 Pfam PF01145 SPFH domain / Band 7 family 34 182 1.4E-21 T 11-11-2016 IPR001107 Band 7 domain SHALO_RS12550 b2ffecae140a4cc1ba7e94bb065a6cf5 551 Pfam PF15975 Flotillin 401 525 1.1E-34 T 11-11-2016 IPR031905 Flotillin, C-terminal domain Reactome: R-HSA-8849932 SHALO_RS12550 b2ffecae140a4cc1ba7e94bb065a6cf5 551 SUPERFAMILY SSF117892 56 184 5.23E-21 T 11-11-2016 IPR001107 Band 7 domain SHALO_RS12550 b2ffecae140a4cc1ba7e94bb065a6cf5 551 SMART SM00244 25 194 1.4E-8 T 11-11-2016 IPR001107 Band 7 domain SHALO_RS10740 c80d7945b7a3cf5c71b4db18f9888427 148 Gene3D G3DSA:3.40.50.1450 5 140 2.9E-12 T 11-11-2016 IPR023430 Peptidase HybD-like domain SHALO_RS10740 c80d7945b7a3cf5c71b4db18f9888427 148 SUPERFAMILY SSF53163 3 141 8.11E-20 T 11-11-2016 IPR023430 Peptidase HybD-like domain SHALO_RS10740 c80d7945b7a3cf5c71b4db18f9888427 148 TIGRFAM TIGR00072 hydrog_prot: hydrogenase maturation protease 5 139 8.8E-20 T 11-11-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 SHALO_RS04325 c3a263e153f0a6d7997971d68e2ecafc 292 Gene3D G3DSA:3.40.50.10330 12 155 3.7E-31 T 11-11-2016 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 SHALO_RS04325 c3a263e153f0a6d7997971d68e2ecafc 292 Gene3D G3DSA:2.60.200.30 156 263 3.9E-42 T 11-11-2016 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 SHALO_RS04325 c3a263e153f0a6d7997971d68e2ecafc 292 Pfam PF01513 ATP-NAD kinase 68 273 1.1E-49 T 11-11-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 SHALO_RS04325 c3a263e153f0a6d7997971d68e2ecafc 292 Hamap MF_00361 NAD kinase [nadK]. 14 289 31.734 T 11-11-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 SHALO_RS04325 c3a263e153f0a6d7997971d68e2ecafc 292 SUPERFAMILY SSF111331 15 290 5.49E-81 T 11-11-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain SHALO_RS12370 126477cc10b117473ef113eff9476c38 301 SMART SM00387 161 275 3.8E-15 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS12370 126477cc10b117473ef113eff9476c38 301 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 162 273 4.7E-15 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS12370 126477cc10b117473ef113eff9476c38 301 SUPERFAMILY SSF55874 105 273 2.89E-27 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS12370 126477cc10b117473ef113eff9476c38 301 Gene3D G3DSA:3.30.565.10 123 279 8.0E-27 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHALO_RS10730 5e27c2ff95b48c43bd6dce4f83c8cc2d 274 Gene3D G3DSA:3.40.50.700 29 153 1.1E-32 T 11-11-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS10730 5e27c2ff95b48c43bd6dce4f83c8cc2d 274 SUPERFAMILY SSF56770 28 159 1.2E-52 T 11-11-2016 SHALO_RS10730 5e27c2ff95b48c43bd6dce4f83c8cc2d 274 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 40 149 6.8E-26 T 11-11-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS10730 5e27c2ff95b48c43bd6dce4f83c8cc2d 274 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 123 139 - T 11-11-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS03925 8e4f0ba4ee676e16663969e1fe7f8942 373 Pfam PF05707 Zonular occludens toxin (Zot) 34 193 1.9E-9 T 11-11-2016 IPR008900 Zona occludens toxin SHALO_RS03925 8e4f0ba4ee676e16663969e1fe7f8942 373 Gene3D G3DSA:3.40.50.300 25 192 5.6E-17 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS08780 c50a03543f4d84a1093783e2beb10d0e 395 Pfam PF06965 Na+/H+ antiporter 1 7 383 1.7E-147 T 11-11-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 SHALO_RS08780 c50a03543f4d84a1093783e2beb10d0e 395 Gene3D G3DSA:1.20.1530.10 4 388 2.7E-151 T 11-11-2016 IPR023171 Na/H antiporter domain SHALO_RS08780 c50a03543f4d84a1093783e2beb10d0e 395 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 8 383 1.6E-146 T 11-11-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 SHALO_RS08780 c50a03543f4d84a1093783e2beb10d0e 395 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 5 389 23.24 T 11-11-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 SHALO_RS09800 0cc58a72fab5b78bbf5f84951ef2a338 120 Pfam PF01638 HxlR-like helix-turn-helix 19 108 2.3E-29 T 11-11-2016 IPR002577 Helix-turn-helix, HxlR type SHALO_RS09800 0cc58a72fab5b78bbf5f84951ef2a338 120 Gene3D G3DSA:1.10.10.10 2 110 7.5E-38 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS09800 0cc58a72fab5b78bbf5f84951ef2a338 120 SUPERFAMILY SSF46785 7 107 3.29E-30 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS05275 b2b2e7fd8a2893a5f228dc2aa7125ed4 826 Pfam PF04168 A predicted alpha-helical domain with a conserved ER motif. 501 821 3.8E-46 T 11-11-2016 IPR007296 Domain of unknown function DUF403 SHALO_RS05275 b2b2e7fd8a2893a5f228dc2aa7125ed4 826 SUPERFAMILY SSF56059 22 218 1.59E-19 T 11-11-2016 SHALO_RS05275 b2b2e7fd8a2893a5f228dc2aa7125ed4 826 SUPERFAMILY SSF56059 341 454 1.59E-19 T 11-11-2016 SHALO_RS05275 b2b2e7fd8a2893a5f228dc2aa7125ed4 826 Pfam PF14403 Circularly permuted ATP-grasp type 2 80 454 3.8E-132 T 11-11-2016 IPR025841 Circularly permuted ATP-grasp type 2 SHALO_RS06555 d8a4f1718795ee06c3542ae06b518cd5 407 Gene3D G3DSA:1.20.1250.20 221 397 1.9E-13 T 11-11-2016 SHALO_RS06555 d8a4f1718795ee06c3542ae06b518cd5 407 Gene3D G3DSA:1.20.1250.20 34 193 7.5E-15 T 11-11-2016 SHALO_RS06555 d8a4f1718795ee06c3542ae06b518cd5 407 Pfam PF05977 Transmembrane secretion effector 5 392 9.2E-60 T 11-11-2016 IPR010290 Transmembrane secretion effector SHALO_RS06555 d8a4f1718795ee06c3542ae06b518cd5 407 SUPERFAMILY SSF103473 12 399 3.79E-45 T 11-11-2016 IPR020846 Major facilitator superfamily domain SHALO_RS02665 110f5b14498d4ef10a47983a779ca8c6 187 Pfam PF00925 GTP cyclohydrolase II 9 163 1.1E-55 T 11-11-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 SHALO_RS02665 110f5b14498d4ef10a47983a779ca8c6 187 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 1 187 35.635 T 11-11-2016 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 SHALO_RS02665 110f5b14498d4ef10a47983a779ca8c6 187 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 7 187 4.6E-71 T 11-11-2016 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 SHALO_RS02665 110f5b14498d4ef10a47983a779ca8c6 187 SUPERFAMILY SSF142695 3 165 1.44E-49 T 11-11-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 SHALO_RS03500 73a783c1e990b734098f963ee8464187 250 SUPERFAMILY SSF52402 14 240 2.65E-44 T 11-11-2016 SHALO_RS03500 73a783c1e990b734098f963ee8464187 250 PIRSF PIRSF004976 3 247 9.8E-61 T 11-11-2016 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 Reactome: R-HSA-6782315 SHALO_RS03500 73a783c1e990b734098f963ee8464187 250 Gene3D G3DSA:3.40.50.620 19 190 6.3E-22 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHALO_RS03500 73a783c1e990b734098f963ee8464187 250 Pfam PF01171 PP-loop family 27 197 5.1E-22 T 11-11-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 SHALO_RS03160 0d47e04a0becde3574ec9bf8e8ffc4c5 107 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 6 97 5.8E-12 T 11-11-2016 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family SHALO_RS03160 0d47e04a0becde3574ec9bf8e8ffc4c5 107 SUPERFAMILY SSF143011 4 95 9.94E-5 T 11-11-2016 SHALO_RS11285 4b4769aa86d8559d2184af6e9f248ca9 98 SUPERFAMILY SSF46626 6 96 5.87E-15 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS11285 4b4769aa86d8559d2184af6e9f248ca9 98 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 18 91 1.8E-10 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS11285 4b4769aa86d8559d2184af6e9f248ca9 98 Gene3D G3DSA:1.10.760.10 7 96 6.2E-15 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS12505 851ba036477a505b291556b4d0db7928 110 Pfam PF13310 Virulence protein RhuM family 40 94 2.2E-8 T 11-11-2016 IPR011204 Virulence protein RhuM-like SHALO_RS09695 fd5692209b1933603ddc57ee6402f2d4 277 SUPERFAMILY SSF53850 45 187 9.43E-10 T 11-11-2016 SHALO_RS09695 fd5692209b1933603ddc57ee6402f2d4 277 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 25 238 2.2E-31 T 11-11-2016 SHALO_RS03040 356336eb223a4286e7c204520c4b93f5 71 Pfam PF13275 S4 domain 3 66 5.6E-23 T 11-11-2016 SHALO_RS03040 356336eb223a4286e7c204520c4b93f5 71 Gene3D G3DSA:3.10.290.10 2 66 2.2E-24 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 SHALO_RS03040 356336eb223a4286e7c204520c4b93f5 71 SUPERFAMILY SSF55174 2 66 1.7E-16 T 11-11-2016 SHALO_RS07895 699925a8ee01311fd384880a82510d7e 144 Pfam PF13380 CoA binding domain 24 139 2.5E-36 T 11-11-2016 IPR003781 CoA-binding GO:0048037 SHALO_RS07895 699925a8ee01311fd384880a82510d7e 144 SUPERFAMILY SSF51735 9 141 3.04E-37 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS07895 699925a8ee01311fd384880a82510d7e 144 SMART SM00881 19 113 6.5E-19 T 11-11-2016 IPR003781 CoA-binding GO:0048037 SHALO_RS07895 699925a8ee01311fd384880a82510d7e 144 Gene3D G3DSA:3.40.50.720 8 142 2.6E-44 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS04130 96627c582570963532200d57a4fbe829 171 PIRSF PIRSF004638 1 147 3.1E-45 T 11-11-2016 IPR005265 Uncharacterised protein family UPF0093 SHALO_RS04130 96627c582570963532200d57a4fbe829 171 TIGRFAM TIGR00701 TIGR00701: TIGR00701 family protein 3 144 5.7E-43 T 11-11-2016 IPR014351 Conserved hypothetical protein CHP00701 SHALO_RS04130 96627c582570963532200d57a4fbe829 171 Pfam PF03653 Uncharacterised protein family (UPF0093) 2 144 6.3E-50 T 11-11-2016 IPR005265 Uncharacterised protein family UPF0093 SHALO_RS09905 d6499b5223071aa704bc7dd1649b52b9 269 Pfam PF15436 Plasminogen-binding protein pgbA N-terminal 26 238 5.9E-76 T 11-11-2016 IPR029276 Plasminogen-binding protein PgbA, N-terminal SHALO_RS10745 49594ee67465c7f07ac941d0db6671e5 844 SUPERFAMILY SSF51445 52 296 1.75E-41 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily SHALO_RS10745 49594ee67465c7f07ac941d0db6671e5 844 Gene3D G3DSA:3.20.20.80 51 296 9.0E-33 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SHALO_RS10745 49594ee67465c7f07ac941d0db6671e5 844 SUPERFAMILY SSF53448 411 677 2.38E-41 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases SHALO_RS10745 49594ee67465c7f07ac941d0db6671e5 844 Pfam PF13641 Glycosyltransferase like family 2 414 642 5.0E-29 T 11-11-2016 SHALO_RS10745 49594ee67465c7f07ac941d0db6671e5 844 Gene3D G3DSA:3.90.550.10 414 657 1.0E-26 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases SHALO_RS01735 997437050fc0bbe0734800f7275028eb 156 Pfam PF05573 NosL 19 146 2.3E-20 T 11-11-2016 IPR008719 Nitrous oxide reductase accessory protein NosL SHALO_RS01735 997437050fc0bbe0734800f7275028eb 156 SUPERFAMILY SSF160387 41 153 2.62E-25 T 11-11-2016 SHALO_RS07855 c4546c9ca47013a767d942fe8e00bd6f 165 SUPERFAMILY SSF54534 3 142 4.91E-23 T 11-11-2016 SHALO_RS07855 c4546c9ca47013a767d942fe8e00bd6f 165 Gene3D G3DSA:3.10.50.40 124 141 1.1E-7 T 11-11-2016 SHALO_RS07855 c4546c9ca47013a767d942fe8e00bd6f 165 Gene3D G3DSA:3.10.50.40 4 68 1.1E-7 T 11-11-2016 SHALO_RS04725 512f727008583a33df3541fa7bbf2998 282 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 1 282 13.546 T 11-11-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 SHALO_RS04725 512f727008583a33df3541fa7bbf2998 282 Pfam PF01040 UbiA prenyltransferase family 34 242 3.4E-39 T 11-11-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 SHALO_RS03780 5bbfb3a9a77d8f895dfe5b92e5b5753d 96 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 3 96 1.5E-20 T 11-11-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 SHALO_RS03780 5bbfb3a9a77d8f895dfe5b92e5b5753d 96 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 2 96 17.135 T 11-11-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 SHALO_RS03780 5bbfb3a9a77d8f895dfe5b92e5b5753d 96 SUPERFAMILY SSF141000 3 94 1.7E-19 T 11-11-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 SHALO_RS03780 5bbfb3a9a77d8f895dfe5b92e5b5753d 96 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 19 91 3.1E-13 T 11-11-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 SHALO_RS07360 374f72c5792530573940e79fd423935d 507 TIGRFAM TIGR02519 pilus_MshL: pilus (MSHA type) biogenesis protein MshL 194 486 2.1E-79 T 11-11-2016 IPR013358 Pilus biogenesis, MshL SHALO_RS07360 374f72c5792530573940e79fd423935d 507 Pfam PF00263 Bacterial type II and III secretion system protein 314 486 1.1E-44 T 11-11-2016 IPR004846 Type II/III secretion system GO:0009306 SHALO_RS07360 374f72c5792530573940e79fd423935d 507 PRINTS PR00811 Bacterial general secretion pathway protein D signature 309 333 7.8E-13 T 11-11-2016 IPR001775 GspD/PilQ family SHALO_RS07360 374f72c5792530573940e79fd423935d 507 PRINTS PR00811 Bacterial general secretion pathway protein D signature 451 469 7.8E-13 T 11-11-2016 IPR001775 GspD/PilQ family SHALO_RS07360 374f72c5792530573940e79fd423935d 507 PRINTS PR00811 Bacterial general secretion pathway protein D signature 348 358 7.8E-13 T 11-11-2016 IPR001775 GspD/PilQ family SHALO_RS07360 374f72c5792530573940e79fd423935d 507 PRINTS PR00811 Bacterial general secretion pathway protein D signature 228 238 7.8E-13 T 11-11-2016 IPR001775 GspD/PilQ family SHALO_RS03530 ced559c6a0085961f927a286bde58b57 151 PIRSF PIRSF004505 1 151 2.6E-39 T 11-11-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SHALO_RS03530 ced559c6a0085961f927a286bde58b57 151 Pfam PF02590 Predicted SPOUT methyltransferase 1 150 6.6E-37 T 11-11-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SHALO_RS03530 ced559c6a0085961f927a286bde58b57 151 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 151 22.312 T 11-11-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SHALO_RS03530 ced559c6a0085961f927a286bde58b57 151 Gene3D G3DSA:3.40.1280.10 1 151 3.6E-39 T 11-11-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SHALO_RS03530 ced559c6a0085961f927a286bde58b57 151 SUPERFAMILY SSF75217 1 150 1.64E-34 T 11-11-2016 IPR029028 Alpha/beta knot methyltransferases SHALO_RS13715 d4f452e720864cff639ca2be79251121 362 Pfam PF01841 Transglutaminase-like superfamily 153 275 1.9E-23 T 11-11-2016 IPR002931 Transglutaminase-like SHALO_RS13715 d4f452e720864cff639ca2be79251121 362 SMART SM00460 199 277 1.5E-12 T 11-11-2016 IPR002931 Transglutaminase-like SHALO_RS13715 d4f452e720864cff639ca2be79251121 362 SUPERFAMILY SSF54001 128 276 8.97E-26 T 11-11-2016 SHALO_RS13715 d4f452e720864cff639ca2be79251121 362 Gene3D G3DSA:3.90.260.10 200 277 8.1E-7 T 11-11-2016 IPR002931 Transglutaminase-like SHALO_RS12995 98b8f55259d413be639d340e128f37fe 423 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 290 311 9.1E-39 T 11-11-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 SHALO_RS12995 98b8f55259d413be639d340e128f37fe 423 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 323 347 9.1E-39 T 11-11-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 SHALO_RS12995 98b8f55259d413be639d340e128f37fe 423 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 21 44 9.1E-39 T 11-11-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 SHALO_RS12995 98b8f55259d413be639d340e128f37fe 423 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 387 402 9.1E-39 T 11-11-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 SHALO_RS12995 98b8f55259d413be639d340e128f37fe 423 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 63 83 9.1E-39 T 11-11-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 SHALO_RS12995 98b8f55259d413be639d340e128f37fe 423 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 402 422 9.1E-39 T 11-11-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 SHALO_RS12995 98b8f55259d413be639d340e128f37fe 423 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 347 370 9.1E-39 T 11-11-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 SHALO_RS12995 98b8f55259d413be639d340e128f37fe 423 Pfam PF13437 HlyD family secretion protein 278 378 4.6E-14 T 11-11-2016 SHALO_RS12995 98b8f55259d413be639d340e128f37fe 423 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 15 422 2.7E-100 T 11-11-2016 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 SHALO_RS12995 98b8f55259d413be639d340e128f37fe 423 Gene3D G3DSA:2.40.50.100 275 309 5.0E-11 T 11-11-2016 SHALO_RS12995 98b8f55259d413be639d340e128f37fe 423 Gene3D G3DSA:2.40.50.100 56 85 5.0E-11 T 11-11-2016 SHALO_RS07635 20cc3394cb1e54eb7fb116442f69a93d 343 Pfam PF01032 FecCD transport family 29 335 3.4E-89 T 11-11-2016 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 SHALO_RS07635 20cc3394cb1e54eb7fb116442f69a93d 343 SUPERFAMILY SSF81345 11 334 2.48E-75 T 11-11-2016 IPR029022 ABC transporter, BtuC-like SHALO_RS07635 20cc3394cb1e54eb7fb116442f69a93d 343 Gene3D G3DSA:1.10.3470.10 15 340 4.9E-99 T 11-11-2016 IPR029022 ABC transporter, BtuC-like SHALO_RS04155 f0c5795f9d9207744f14858b1fb24466 299 Pfam PF07859 alpha/beta hydrolase fold 79 272 6.0E-12 T 11-11-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 SHALO_RS04155 f0c5795f9d9207744f14858b1fb24466 299 SUPERFAMILY SSF53474 58 266 7.83E-32 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold SHALO_RS04155 f0c5795f9d9207744f14858b1fb24466 299 Gene3D G3DSA:3.40.50.1820 39 293 4.3E-40 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold SHALO_RS05415 f157c376671b068986a6c925030fc7fd 170 Pfam PF02915 Rubrerythrin 5 139 2.6E-11 T 11-11-2016 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 SHALO_RS05415 f157c376671b068986a6c925030fc7fd 170 Gene3D G3DSA:1.20.1260.10 2 144 3.7E-28 T 11-11-2016 IPR012347 Ferritin-related SHALO_RS05415 f157c376671b068986a6c925030fc7fd 170 SUPERFAMILY SSF47240 4 149 6.82E-25 T 11-11-2016 IPR009078 Ferritin-like superfamily SHALO_RS14230 e34eafbe2a040740b14dcc0c1c6adbea 156 Gene3D G3DSA:3.40.630.30 1 155 4.4E-36 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase SHALO_RS14230 e34eafbe2a040740b14dcc0c1c6adbea 156 SUPERFAMILY SSF55729 1 155 1.89E-28 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase SHALO_RS14230 e34eafbe2a040740b14dcc0c1c6adbea 156 Pfam PF13673 Acetyltransferase (GNAT) domain 51 151 2.5E-16 T 11-11-2016 IPR000182 GNAT domain GO:0008080 SHALO_RS02790 a9c4146189173f99dafda1805d0cd719 262 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 3 260 8.3E-102 T 11-11-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 SHALO_RS02790 a9c4146189173f99dafda1805d0cd719 262 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 2 260 37.254 T 11-11-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 SHALO_RS02790 a9c4146189173f99dafda1805d0cd719 262 SUPERFAMILY SSF51621 2 260 2.2E-92 T 11-11-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SHALO_RS02790 a9c4146189173f99dafda1805d0cd719 262 Gene3D G3DSA:3.20.20.60 2 260 3.2E-100 T 11-11-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SHALO_RS02790 a9c4146189173f99dafda1805d0cd719 262 PIRSF PIRSF000388 1 262 1.1E-99 T 11-11-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 SHALO_RS02790 a9c4146189173f99dafda1805d0cd719 262 Pfam PF02548 Ketopantoate hydroxymethyltransferase 3 255 7.5E-100 T 11-11-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 SHALO_RS13750 fb603a46e0893d75a986f89df925b1f9 214 Pfam PF09347 Domain of unknown function (DUF1989) 21 186 3.9E-61 T 11-11-2016 IPR018959 Domain of unknown function DUF1989 SHALO_RS13750 fb603a46e0893d75a986f89df925b1f9 214 TIGRFAM TIGR03424 urea_degr_1: urea carboxylase-associated protein 1 16 212 1.3E-102 T 11-11-2016 IPR017791 Urea carboxylase-associated protein 1 SHALO_RS04815 ac185346df60d016f02fb538ee4cd502 165 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 39 - T 11-11-2016 IPR010916 TonB box, conserved site SHALO_RS11810 2007807d4689b541c35b7edcf452b9e7 109 SUPERFAMILY SSF51182 24 106 1.69E-9 T 11-11-2016 IPR011051 RmlC-like cupin domain SHALO_RS11810 2007807d4689b541c35b7edcf452b9e7 109 Gene3D G3DSA:2.60.120.10 17 108 1.6E-5 T 11-11-2016 IPR014710 RmlC-like jelly roll fold SHALO_RS04885 1263230a65f0675a5aa8e91f22deeecd 96 Pfam PF00034 Cytochrome c 23 94 3.1E-4 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS04885 1263230a65f0675a5aa8e91f22deeecd 96 Gene3D G3DSA:1.10.760.10 18 94 5.7E-13 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS04885 1263230a65f0675a5aa8e91f22deeecd 96 SUPERFAMILY SSF46626 23 93 1.77E-10 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS12470 dc11f141d6d06751c0cbb54a7fa71d9a 202 SUPERFAMILY SSF141571 28 181 2.35E-35 T 11-11-2016 SHALO_RS12470 dc11f141d6d06751c0cbb54a7fa71d9a 202 Pfam PF00805 Pentapeptide repeats (8 copies) 134 171 6.9E-10 T 11-11-2016 IPR001646 Pentapeptide repeat SHALO_RS12470 dc11f141d6d06751c0cbb54a7fa71d9a 202 Pfam PF00805 Pentapeptide repeats (8 copies) 33 70 2.2E-7 T 11-11-2016 IPR001646 Pentapeptide repeat SHALO_RS12470 dc11f141d6d06751c0cbb54a7fa71d9a 202 Pfam PF00805 Pentapeptide repeats (8 copies) 96 126 2.1E-6 T 11-11-2016 IPR001646 Pentapeptide repeat SHALO_RS02090 2b56cd00ae2e5c014104839a227faa11 621 Pfam PF02384 N-6 DNA Methylase 89 343 1.3E-18 T 11-11-2016 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 SHALO_RS02090 2b56cd00ae2e5c014104839a227faa11 621 Gene3D G3DSA:3.40.50.150 94 341 6.0E-43 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS02090 2b56cd00ae2e5c014104839a227faa11 621 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 91 107 3.9E-13 T 11-11-2016 SHALO_RS02090 2b56cd00ae2e5c014104839a227faa11 621 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 121 135 3.9E-13 T 11-11-2016 SHALO_RS02090 2b56cd00ae2e5c014104839a227faa11 621 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 248 272 3.9E-13 T 11-11-2016 SHALO_RS02090 2b56cd00ae2e5c014104839a227faa11 621 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 213 225 3.9E-13 T 11-11-2016 SHALO_RS02090 2b56cd00ae2e5c014104839a227faa11 621 SUPERFAMILY SSF53335 47 355 7.93E-45 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS02090 2b56cd00ae2e5c014104839a227faa11 621 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 216 222 - T 11-11-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 SHALO_RS09775 475ad232de84368ad8a2d318340d3096 224 Pfam PF03591 AzlC protein 12 150 1.9E-41 T 11-11-2016 IPR011606 Branched-chain amino acid transport, permease SHALO_RS14065 99a0456dee429b9c2ff98ba8877125e9 164 Gene3D G3DSA:3.40.50.1810 1 135 4.5E-25 T 11-11-2016 IPR007710 Nucleoside 2-deoxyribosyltransferase GO:0009159|GO:0050144|GO:0070694 SHALO_RS14065 99a0456dee429b9c2ff98ba8877125e9 164 SUPERFAMILY SSF52309 1 146 4.58E-40 T 11-11-2016 SHALO_RS14065 99a0456dee429b9c2ff98ba8877125e9 164 Pfam PF05014 Nucleoside 2-deoxyribosyltransferase 4 140 1.8E-41 T 11-11-2016 IPR007710 Nucleoside 2-deoxyribosyltransferase GO:0009159|GO:0050144|GO:0070694 SHALO_RS14550 4a279b1ea3b7cb2c28c1bb7bf8051a18 155 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 82 95 1.4E-17 T 11-11-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 SHALO_RS14550 4a279b1ea3b7cb2c28c1bb7bf8051a18 155 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 114 127 1.4E-17 T 11-11-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 SHALO_RS14550 4a279b1ea3b7cb2c28c1bb7bf8051a18 155 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 99 113 1.4E-17 T 11-11-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 SHALO_RS14550 4a279b1ea3b7cb2c28c1bb7bf8051a18 155 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 154 2.5E-49 T 11-11-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 SHALO_RS14550 4a279b1ea3b7cb2c28c1bb7bf8051a18 155 SUPERFAMILY SSF51230 79 152 1.44E-21 T 11-11-2016 IPR011053 Single hybrid motif SHALO_RS14550 4a279b1ea3b7cb2c28c1bb7bf8051a18 155 Pfam PF00364 Biotin-requiring enzyme 80 151 1.2E-19 T 11-11-2016 IPR000089 Biotin/lipoyl attachment SHALO_RS14550 4a279b1ea3b7cb2c28c1bb7bf8051a18 155 Gene3D G3DSA:2.40.50.100 78 153 4.0E-27 T 11-11-2016 SHALO_RS11180 54f0cf3750292f0e8a1069d7c370470f 137 Gene3D G3DSA:1.20.120.330 18 128 3.8E-7 T 11-11-2016 SHALO_RS11180 54f0cf3750292f0e8a1069d7c370470f 137 SUPERFAMILY SSF81593 11 121 5.1E-16 T 11-11-2016 SHALO_RS11340 b5a92436d80944e58ad002c445dfef29 309 Pfam PF02626 Allophanate hydrolase subunit 2 26 286 4.2E-81 T 11-11-2016 IPR003778 Carboxyltransferase domain, subdomain A and B SHALO_RS11340 b5a92436d80944e58ad002c445dfef29 309 SMART SM00797 25 304 4.0E-113 T 11-11-2016 IPR003778 Carboxyltransferase domain, subdomain A and B SHALO_RS11340 b5a92436d80944e58ad002c445dfef29 309 SUPERFAMILY SSF50891 191 293 4.17E-5 T 11-11-2016 IPR029000 Cyclophilin-like domain SHALO_RS11340 b5a92436d80944e58ad002c445dfef29 309 Gene3D G3DSA:2.40.100.10 234 300 6.2E-5 T 11-11-2016 IPR029000 Cyclophilin-like domain SHALO_RS11340 b5a92436d80944e58ad002c445dfef29 309 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 10 299 5.4E-81 T 11-11-2016 IPR003778 Carboxyltransferase domain, subdomain A and B SHALO_RS01165 f142afe30f75a0fc356bc6bb92c29ada 147 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 2 144 3.4E-55 T 11-11-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 SHALO_RS01165 f142afe30f75a0fc356bc6bb92c29ada 147 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 2 146 33.192 T 11-11-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 SHALO_RS01165 f142afe30f75a0fc356bc6bb92c29ada 147 SUPERFAMILY SSF54637 1 144 6.29E-45 T 11-11-2016 IPR029069 HotDog domain SHALO_RS01165 f142afe30f75a0fc356bc6bb92c29ada 147 Gene3D G3DSA:3.10.129.10 2 146 3.3E-53 T 11-11-2016 IPR029069 HotDog domain SHALO_RS01165 f142afe30f75a0fc356bc6bb92c29ada 147 Pfam PF07977 FabA-like domain 11 138 7.9E-36 T 11-11-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 SHALO_RS12220 65afea5a90cf7afbd9a6be4bb2bc50bd 93 Pfam PF00276 Ribosomal protein L23 8 88 1.4E-16 T 11-11-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 SHALO_RS12220 65afea5a90cf7afbd9a6be4bb2bc50bd 93 SUPERFAMILY SSF54189 7 89 6.83E-21 T 11-11-2016 IPR012678 Ribosomal protein L23/L15e core domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHALO_RS12220 65afea5a90cf7afbd9a6be4bb2bc50bd 93 Gene3D G3DSA:3.30.70.330 7 91 4.3E-19 T 11-11-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 SHALO_RS12220 65afea5a90cf7afbd9a6be4bb2bc50bd 93 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 4 93 13.156 T 11-11-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 SHALO_RS11095 50795c86f3adb9922f23fbd25756059b 323 Pfam PF00953 Glycosyl transferase family 4 71 215 7.6E-27 T 11-11-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 SHALO_RS10450 d799eee31e483ff936e98d32e7913fec 227 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 3 21 1.4E-4 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site SHALO_RS10450 d799eee31e483ff936e98d32e7913fec 227 SUPERFAMILY SSF54523 5 104 4.32E-10 T 11-11-2016 SHALO_RS08725 da38e41181e3883428a20961eaf8ceed 536 Pfam PF02254 TrkA-N domain 402 516 1.8E-21 T 11-11-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 SHALO_RS08725 da38e41181e3883428a20961eaf8ceed 536 Pfam PF00999 Sodium/hydrogen exchanger family 8 373 5.2E-60 T 11-11-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 SHALO_RS08725 da38e41181e3883428a20961eaf8ceed 536 SUPERFAMILY SSF51735 398 532 5.21E-28 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS08725 da38e41181e3883428a20961eaf8ceed 536 Gene3D G3DSA:3.40.50.720 399 531 3.1E-30 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS05340 c1987da6d2bd01a4e7ffe16f33172032 157 Pfam PF12821 Threonine/Serine exporter, ThrE 13 147 7.4E-39 T 11-11-2016 IPR024528 Threonine/Serine exporter, ThrE SHALO_RS14270 ba9acfbf537383558db27692664354d9 155 SUPERFAMILY SSF49503 44 155 6.55E-25 T 11-11-2016 IPR008972 Cupredoxin SHALO_RS14270 ba9acfbf537383558db27692664354d9 155 Pfam PF07731 Multicopper oxidase 48 154 7.9E-5 T 11-11-2016 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 SHALO_RS14270 ba9acfbf537383558db27692664354d9 155 Gene3D G3DSA:2.60.40.420 34 154 9.7E-30 T 11-11-2016 IPR008972 Cupredoxin SHALO_RS06275 c448dcea1d9b1aaacada8ca0f7f575a0 291 SUPERFAMILY SSF103481 40 141 1.18E-13 T 11-11-2016 SHALO_RS06275 c448dcea1d9b1aaacada8ca0f7f575a0 291 Pfam PF00892 EamA-like transporter family 6 139 9.6E-20 T 11-11-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SHALO_RS06275 c448dcea1d9b1aaacada8ca0f7f575a0 291 Pfam PF00892 EamA-like transporter family 154 290 2.4E-12 T 11-11-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SHALO_RS09715 3d2425602966a17872f6971e58863cb1 125 Pfam PF07813 LTXXQ motif family protein 21 116 2.6E-6 T 11-11-2016 IPR012899 LTXXQ motif family protein GO:0042597 SHALO_RS13425 69c2901b5eeb26c8d75e71b0cb288b9e 103 SUPERFAMILY SSF54913 1 101 1.67E-17 T 11-11-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta SHALO_RS13425 69c2901b5eeb26c8d75e71b0cb288b9e 103 Pfam PF02641 Uncharacterized ACR, COG1993 14 86 2.2E-8 T 11-11-2016 IPR003793 Domain of unknown function DUF190 SHALO_RS13425 69c2901b5eeb26c8d75e71b0cb288b9e 103 Gene3D G3DSA:3.30.70.120 1 102 1.5E-16 T 11-11-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal SHALO_RS03140 d2e337ccb96cb39a922b94253129fce8 96 Pfam PF01909 Nucleotidyltransferase domain 13 94 1.6E-12 T 11-11-2016 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 SHALO_RS03140 d2e337ccb96cb39a922b94253129fce8 96 SUPERFAMILY SSF81301 2 94 1.05E-20 T 11-11-2016 SHALO_RS03140 d2e337ccb96cb39a922b94253129fce8 96 Gene3D G3DSA:3.30.460.10 2 93 7.2E-25 T 11-11-2016 SHALO_RS13290 14bcb873f7583df906c55b1e56c83c98 233 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 44 230 3.9E-11 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHALO_RS13290 14bcb873f7583df906c55b1e56c83c98 233 Gene3D G3DSA:1.10.3720.10 19 229 4.0E-27 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHALO_RS13290 14bcb873f7583df906c55b1e56c83c98 233 SUPERFAMILY SSF161098 13 225 2.35E-30 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHALO_RS08760 7d5b69c47f64f9b13966633884122afc 400 Pfam PF02687 FtsX-like permease family 268 392 2.4E-15 T 11-11-2016 IPR003838 ABC transporter permease protein domain GO:0016020 SHALO_RS12975 29e968ca8387202f7a1d11ebbbdcc840 252 Gene3D G3DSA:3.30.420.40 88 229 2.6E-43 T 11-11-2016 SHALO_RS12975 29e968ca8387202f7a1d11ebbbdcc840 252 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 4 245 1.7E-42 T 11-11-2016 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 SHALO_RS12975 29e968ca8387202f7a1d11ebbbdcc840 252 SUPERFAMILY SSF53067 1 245 6.36E-40 T 11-11-2016 SHALO_RS12975 29e968ca8387202f7a1d11ebbbdcc840 252 TIGRFAM TIGR00241 CoA_E_activ: putative CoA-substrate-specific enzyme activase 3 245 4.5E-68 T 11-11-2016 IPR008275 CoA enzyme activase SHALO_RS00215 bacc06b89a76d109826c6b591349d61c 896 Gene3D G3DSA:1.25.10.10 634 786 5.9E-19 T 11-11-2016 IPR011989 Armadillo-like helical SHALO_RS00215 bacc06b89a76d109826c6b591349d61c 896 Gene3D G3DSA:1.25.10.10 494 612 1.2E-19 T 11-11-2016 IPR011989 Armadillo-like helical SHALO_RS00215 bacc06b89a76d109826c6b591349d61c 896 SUPERFAMILY SSF48371 532 595 1.55E-5 T 11-11-2016 IPR016024 Armadillo-type fold GO:0005488 SHALO_RS00215 bacc06b89a76d109826c6b591349d61c 896 SUPERFAMILY SSF48371 210 340 1.55E-5 T 11-11-2016 IPR016024 Armadillo-type fold GO:0005488 SHALO_RS00215 bacc06b89a76d109826c6b591349d61c 896 SUPERFAMILY SSF48371 417 451 1.55E-5 T 11-11-2016 IPR016024 Armadillo-type fold GO:0005488 SHALO_RS00215 bacc06b89a76d109826c6b591349d61c 896 SUPERFAMILY SSF48371 658 686 1.09E-18 T 11-11-2016 IPR016024 Armadillo-type fold GO:0005488 SHALO_RS00215 bacc06b89a76d109826c6b591349d61c 896 SUPERFAMILY SSF48371 494 621 1.09E-18 T 11-11-2016 IPR016024 Armadillo-type fold GO:0005488 SHALO_RS02005 6a4d3048532ee7317fdc444b8f9ff81a 168 ProSitePatterns PS00028 Zinc finger C2H2 type domain signature. 101 124 - T 11-11-2016 IPR007087 Zinc finger, C2H2 GO:0046872 SHALO_RS00575 bd2244aa00078f3c686787ce8f1c54dc 261 Gene3D G3DSA:3.40.50.620 72 222 1.4E-17 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHALO_RS00575 bd2244aa00078f3c686787ce8f1c54dc 261 Pfam PF02698 DUF218 domain 76 252 1.2E-20 T 11-11-2016 IPR003848 Domain of unknown function DUF218 SHALO_RS11755 5e6deb3ed499016c88f8d23b4edd0c01 465 Pfam PF00999 Sodium/hydrogen exchanger family 68 454 9.9E-62 T 11-11-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 SHALO_RS03015 38067261cf5d2caab00a20f7b16dfdbe 74 SUPERFAMILY SSF46689 4 63 6.09E-21 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 SHALO_RS03015 38067261cf5d2caab00a20f7b16dfdbe 74 Pfam PF04255 Protein of unknown function (DUF433) 5 60 8.7E-24 T 11-11-2016 IPR007367 Protein of unknown function DUF433 SHALO_RS03015 38067261cf5d2caab00a20f7b16dfdbe 74 Gene3D G3DSA:1.10.10.10 5 66 2.1E-26 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS08900 a5ffa01495776c36ac364c510ccb2fc4 130 Gene3D G3DSA:3.40.250.10 27 123 2.4E-15 T 11-11-2016 IPR001763 Rhodanese-like domain SHALO_RS08900 a5ffa01495776c36ac364c510ccb2fc4 130 SMART SM00450 19 124 2.4E-5 T 11-11-2016 IPR001763 Rhodanese-like domain SHALO_RS08900 a5ffa01495776c36ac364c510ccb2fc4 130 SUPERFAMILY SSF52821 26 124 2.23E-14 T 11-11-2016 IPR001763 Rhodanese-like domain SHALO_RS08900 a5ffa01495776c36ac364c510ccb2fc4 130 Pfam PF00581 Rhodanese-like domain 30 118 1.3E-10 T 11-11-2016 IPR001763 Rhodanese-like domain SHALO_RS01850 cc2c087650cbc9b121ccced65122ed27 458 SUPERFAMILY SSF56349 194 393 1.38E-13 T 11-11-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 SHALO_RS01850 cc2c087650cbc9b121ccced65122ed27 458 Gene3D G3DSA:1.10.443.10 194 393 2.0E-15 T 11-11-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 SHALO_RS01850 cc2c087650cbc9b121ccced65122ed27 458 Pfam PF00589 Phage integrase family 189 349 3.2E-8 T 11-11-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 SHALO_RS09625 ba187f010c946aa4c91539ed77c287f1 182 Pfam PF01794 Ferric reductase like transmembrane component 35 142 2.0E-12 T 11-11-2016 IPR013130 Ferric reductase transmembrane component-like domain SHALO_RS05940 89dfee0b9e5dc2bff9b2bbdbaa3bf971 525 SUPERFAMILY SSF81442 12 391 5.1E-10 T 11-11-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_RS05940 89dfee0b9e5dc2bff9b2bbdbaa3bf971 525 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 11 361 3.6E-10 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SHALO_RS11080 1a4607604cb3eb288490e07eb43c862a 301 Gene3D G3DSA:3.30.450.20 37 137 1.3E-20 T 11-11-2016 SHALO_RS11080 1a4607604cb3eb288490e07eb43c862a 301 SUPERFAMILY SSF103190 8 146 4.32E-21 T 11-11-2016 IPR029151 Periplasmic sensor domain-like SHALO_RS14025 627d23c512cf5ac64cd8b1731c0f5ec4 276 Pfam PF04976 DMSO reductase anchor subunit (DmsC) 1 266 7.0E-15 T 11-11-2016 IPR007059 DMSO reductase anchor subunit (DmsC) GO:0016021|GO:0019645 SHALO_RS03355 b80e91e3094fbb927eeb598f9d79f4eb 149 Gene3D G3DSA:3.40.630.30 2 142 2.7E-33 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase SHALO_RS03355 b80e91e3094fbb927eeb598f9d79f4eb 149 Pfam PF00583 Acetyltransferase (GNAT) family 56 136 3.7E-20 T 11-11-2016 IPR000182 GNAT domain GO:0008080 SHALO_RS03355 b80e91e3094fbb927eeb598f9d79f4eb 149 SUPERFAMILY SSF55729 1 137 3.99E-32 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase SHALO_RS07470 7835d127ff257a58f8cca9de5fec2e55 155 Gene3D G3DSA:1.10.287.950 1 145 1.1E-31 T 11-11-2016 SHALO_RS07470 7835d127ff257a58f8cca9de5fec2e55 155 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 1 153 2.8E-30 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SHALO_RS07470 7835d127ff257a58f8cca9de5fec2e55 155 SUPERFAMILY SSF58104 1 155 4.71E-40 T 11-11-2016 SHALO_RS11850 9b7f416bbbc74bacff5c9c2a8ca2b041 533 SUPERFAMILY SSF58104 223 532 8.24E-55 T 11-11-2016 SHALO_RS11850 9b7f416bbbc74bacff5c9c2a8ca2b041 533 Gene3D G3DSA:1.10.287.950 287 480 1.5E-42 T 11-11-2016 SHALO_RS11850 9b7f416bbbc74bacff5c9c2a8ca2b041 533 SMART SM00283 263 531 1.2E-40 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SHALO_RS11850 9b7f416bbbc74bacff5c9c2a8ca2b041 533 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 345 530 7.5E-40 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SHALO_RS07770 8637b2d436cee22eeac01aa70cb11515 99 Gene3D G3DSA:3.30.40.10 5 72 3.6E-4 T 11-11-2016 IPR013083 Zinc finger, RING/FYVE/PHD-type SHALO_RS01160 39faacd2091c7318d70e326371560439 362 Pfam PF02677 Uncharacterized BCR, COG1636 1 175 1.1E-51 T 11-11-2016 IPR003828 Protein of unknown function DUF208 SHALO_RS06210 9e2ac7b243dbca86c78c672f4e812e39 357 SUPERFAMILY SSF103088 212 338 1.27E-19 T 11-11-2016 IPR006665 OmpA-like domain SHALO_RS06210 9e2ac7b243dbca86c78c672f4e812e39 357 Pfam PF00691 OmpA family 224 330 2.1E-12 T 11-11-2016 IPR006665 OmpA-like domain SHALO_RS06210 9e2ac7b243dbca86c78c672f4e812e39 357 Gene3D G3DSA:3.30.1330.60 209 338 6.2E-25 T 11-11-2016 IPR006665 OmpA-like domain SHALO_RS03070 dc022e6d7b2d0e4a65e146223beb8149 446 Pfam PF02447 GntP family permease 1 444 3.3E-98 T 11-11-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 SHALO_RS03070 dc022e6d7b2d0e4a65e146223beb8149 446 PIRSF PIRSF002746 1 446 5.5E-117 T 11-11-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 SHALO_RS08265 188ac309538c779e37ff4b88e35844cc 354 Hamap MF_02054 Tyrosine recombinase XerH [xerH]. 1 350 47.172 T 11-11-2016 IPR033683 Tyrosine recombinase XerH SHALO_RS08265 188ac309538c779e37ff4b88e35844cc 354 Pfam PF00589 Phage integrase family 169 340 2.4E-35 T 11-11-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 SHALO_RS08265 188ac309538c779e37ff4b88e35844cc 354 SUPERFAMILY SSF56349 94 346 2.83E-40 T 11-11-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 SHALO_RS08265 188ac309538c779e37ff4b88e35844cc 354 Gene3D G3DSA:1.10.443.10 171 345 7.4E-42 T 11-11-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 SHALO_RS12795 e35cc5e6e058d297e100d7b2b54e5d7c 249 Pfam PF03824 High-affinity nickel-transport protein 39 139 6.9E-14 T 11-11-2016 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 SHALO_RS15015 4f43dbe4400c4f8b82c3d88ebb04531b 235 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 31 227 1.6E-48 T 11-11-2016 SHALO_RS06560 10e7c6169c739fd9b988d53e012fa4a1 93 Pfam PF04365 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 5 84 1.5E-5 T 11-11-2016 IPR007460 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system SHALO_RS01710 916481863b53444544036190c1b9c078 327 Gene3D G3DSA:3.40.190.10 106 190 2.0E-12 T 11-11-2016 SHALO_RS01710 916481863b53444544036190c1b9c078 327 SUPERFAMILY SSF53850 36 306 2.03E-26 T 11-11-2016 SHALO_RS01710 916481863b53444544036190c1b9c078 327 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 52 240 9.3E-7 T 11-11-2016 SHALO_RS01710 916481863b53444544036190c1b9c078 327 PIRSF PIRSF027386 1 323 7.3E-101 T 11-11-2016 IPR027024 ABC-type uncharacterised transport system, substrate-binding component, TM0202 type SHALO_RS06485 dc75dda9658936e5d7ad05edd3fc9873 126 PIRSF PIRSF029543 2 126 6.0E-30 T 11-11-2016 IPR016924 Uncharacterised conserved protein UCP029543 SHALO_RS12090 29a57cfcc1f5119f67166ffe3cd3249e 93 SUPERFAMILY SSF117916 3 86 1.42E-23 T 11-11-2016 SHALO_RS12090 29a57cfcc1f5119f67166ffe3cd3249e 93 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 18 80 5.0E-15 T 11-11-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 SHALO_RS12090 29a57cfcc1f5119f67166ffe3cd3249e 93 Pfam PF01106 NifU-like domain 13 78 7.8E-22 T 11-11-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 SHALO_RS00610 713c042c92a7e21b1f1264a401060a3d 574 SUPERFAMILY SSF81324 9 147 2.35E-11 T 11-11-2016 SHALO_RS00610 713c042c92a7e21b1f1264a401060a3d 574 Gene3D G3DSA:1.10.287.70 16 103 4.1E-7 T 11-11-2016 SHALO_RS00610 713c042c92a7e21b1f1264a401060a3d 574 SUPERFAMILY SSF51735 125 271 4.04E-18 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS00610 713c042c92a7e21b1f1264a401060a3d 574 Gene3D G3DSA:3.40.50.720 288 425 4.7E-26 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS00610 713c042c92a7e21b1f1264a401060a3d 574 Gene3D G3DSA:3.40.50.720 124 269 3.1E-22 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS00610 713c042c92a7e21b1f1264a401060a3d 574 Pfam PF02254 TrkA-N domain 127 247 1.5E-13 T 11-11-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 SHALO_RS00610 713c042c92a7e21b1f1264a401060a3d 574 Pfam PF02254 TrkA-N domain 290 408 7.1E-22 T 11-11-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 SHALO_RS00610 713c042c92a7e21b1f1264a401060a3d 574 SUPERFAMILY SSF51735 287 424 6.58E-25 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS14915 fe6a1e5905a1546f3487718cb4b939d6 417 SUPERFAMILY SSF47162 219 356 2.48E-6 T 11-11-2016 SHALO_RS07615 cde28e7370699886258657161f2f7bd1 85 Pfam PF04071 Cysteine-rich small domain 3 82 1.6E-27 T 11-11-2016 IPR007212 Cysteine-rich small domain SHALO_RS11535 70fd86a4df982472f8605a8673cb16a3 199 ProDom PD105539 COIL PRECURSOR AQ_678 COILED SIGNAL 16 198 3.0E-24 T 11-11-2016 SHALO_RS03765 8d3ce3ceda0bed898c8a63cafa57908a 179 Pfam PF02674 Colicin V production protein 7 153 3.5E-27 T 11-11-2016 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 SHALO_RS05265 40ea5e59953f9e4526ec8139ade40048 211 Pfam PF06035 Bacterial transglutaminase-like cysteine proteinase BTLCP 53 161 6.9E-14 T 11-11-2016 IPR010319 Transglutaminase-like cysteine peptidase, predicted SHALO_RS11745 a59329f06b2ac9e77449187434099ea2 390 SUPERFAMILY SSF103473 6 380 4.45E-42 T 11-11-2016 IPR020846 Major facilitator superfamily domain SHALO_RS11745 a59329f06b2ac9e77449187434099ea2 390 Pfam PF07690 Major Facilitator Superfamily 14 350 7.9E-33 T 11-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SHALO_RS11745 a59329f06b2ac9e77449187434099ea2 390 Gene3D G3DSA:1.20.1250.20 212 380 4.4E-10 T 11-11-2016 SHALO_RS11745 a59329f06b2ac9e77449187434099ea2 390 Gene3D G3DSA:1.20.1250.20 10 182 4.5E-20 T 11-11-2016 SHALO_RS13140 c3406e072ad74d68c50f5a5b6f576e11 897 Pfam PF01578 Cytochrome C assembly protein 655 859 1.2E-41 T 11-11-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 SHALO_RS13140 c3406e072ad74d68c50f5a5b6f576e11 897 Pfam PF05140 ResB-like family 211 284 1.1E-15 T 11-11-2016 IPR007816 ResB-like domain SHALO_RS13140 c3406e072ad74d68c50f5a5b6f576e11 897 Pfam PF05140 ResB-like family 73 116 3.1E-6 T 11-11-2016 IPR007816 ResB-like domain SHALO_RS02340 d7959968ef56a0a84b27986d0634b7f2 300 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 284 7.8E-42 T 11-11-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 SHALO_RS09835 f359c03b8c6ab32855406351b7a71e9b 225 SMART SM00448 1 112 2.4E-36 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS09835 f359c03b8c6ab32855406351b7a71e9b 225 SUPERFAMILY SSF46894 145 216 2.38E-11 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SHALO_RS09835 f359c03b8c6ab32855406351b7a71e9b 225 Gene3D G3DSA:1.10.10.10 149 217 1.3E-10 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS09835 f359c03b8c6ab32855406351b7a71e9b 225 SMART SM00862 145 216 9.7E-9 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS09835 f359c03b8c6ab32855406351b7a71e9b 225 Pfam PF00072 Response regulator receiver domain 3 112 3.0E-26 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SHALO_RS09835 f359c03b8c6ab32855406351b7a71e9b 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 216 1.8E-10 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHALO_RS09835 f359c03b8c6ab32855406351b7a71e9b 225 Gene3D G3DSA:3.40.50.2300 1 148 1.9E-35 T 11-11-2016 SHALO_RS09835 f359c03b8c6ab32855406351b7a71e9b 225 SUPERFAMILY SSF52172 1 160 2.13E-35 T 11-11-2016 IPR011006 CheY-like superfamily SHALO_RS09465 e0cf20d2ff1bcd62500fb7eb1da4b088 291 SUPERFAMILY SSF103481 41 134 4.84E-10 T 11-11-2016 SHALO_RS09465 e0cf20d2ff1bcd62500fb7eb1da4b088 291 SUPERFAMILY SSF103481 185 285 8.89E-11 T 11-11-2016 SHALO_RS09465 e0cf20d2ff1bcd62500fb7eb1da4b088 291 Pfam PF00892 EamA-like transporter family 142 281 4.9E-16 T 11-11-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SHALO_RS09465 e0cf20d2ff1bcd62500fb7eb1da4b088 291 Pfam PF00892 EamA-like transporter family 5 132 1.8E-17 T 11-11-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SHALO_RS12685 5f6cd4e75cdf78e754b0d3ce1e485314 144 TIGRFAM TIGR02805 exbB2: tonB-system energizer ExbB 4 137 1.3E-51 T 11-11-2016 IPR014172 TonB-system energizer ExbB type-2 GO:0006810|GO:0016020 SHALO_RS12685 5f6cd4e75cdf78e754b0d3ce1e485314 144 Pfam PF01618 MotA/TolQ/ExbB proton channel family 42 137 1.2E-25 T 11-11-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 SHALO_RS04235 1cc5e46bdd98a22bb9b53e697066836e 368 Pfam PF01098 Cell cycle protein 16 354 9.7E-86 T 11-11-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 SHALO_RS00055 711bdc39568e5fcc8477418060deb603 341 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 144 306 9.7E-26 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHALO_RS00055 711bdc39568e5fcc8477418060deb603 341 Gene3D G3DSA:1.10.3720.10 121 306 3.1E-39 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHALO_RS00055 711bdc39568e5fcc8477418060deb603 341 SUPERFAMILY SSF161098 123 305 5.63E-41 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHALO_RS13600 17e87e062853293d76152c2a9cd8dc90 104 Gene3D G3DSA:3.10.129.10 23 95 2.4E-5 T 11-11-2016 IPR029069 HotDog domain SHALO_RS13600 17e87e062853293d76152c2a9cd8dc90 104 SUPERFAMILY SSF54637 16 81 2.98E-5 T 11-11-2016 IPR029069 HotDog domain SHALO_RS00285 49dbb4f838f59e87baa4e32f79bd0ea5 326 Pfam PF14390 Putative PD-(D/E)XK family member, (DUF4420) 7 310 3.6E-48 T 11-11-2016 IPR025534 Putative PD-(D/E)XK family member (DUF4420) SHALO_RS11245 505a8f025110971312afc06524710601 409 Pfam PF04932 O-Antigen ligase 184 330 8.8E-17 T 11-11-2016 IPR007016 O-antigen ligase-related SHALO_RS11260 73c47add4688877ea13819b5ef0aa9fb 337 Pfam PF00852 Glycosyltransferase family 10 (fucosyltransferase) C-term 138 274 7.9E-11 T 11-11-2016 IPR001503 Glycosyl transferase family 10 GO:0006486|GO:0008417|GO:0016020 SHALO_RS11260 73c47add4688877ea13819b5ef0aa9fb 337 SUPERFAMILY SSF53756 25 286 7.53E-45 T 11-11-2016 SHALO_RS10235 02ceea2229eae1a4b7dd144c412948ff 240 Pfam PF02591 C4-type zinc ribbon domain 198 230 2.4E-11 T 11-11-2016 IPR003743 C4-type zinc ribbon domain SHALO_RS08825 5764820a2cf0e182d7f84dfc6231bef2 134 Gene3D G3DSA:3.40.50.280 1 130 9.6E-27 T 11-11-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 SHALO_RS08825 5764820a2cf0e182d7f84dfc6231bef2 134 SUPERFAMILY SSF52242 1 116 2.75E-26 T 11-11-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 SHALO_RS08825 5764820a2cf0e182d7f84dfc6231bef2 134 Pfam PF02310 B12 binding domain 1 91 8.6E-11 T 11-11-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 SHALO_RS04800 551945480121c1f5f13ac7feb104d013 117 Pfam PF03927 NapD protein 1 77 3.7E-23 T 11-11-2016 IPR005623 Chaperone NapD, nitrate reductase assembly SHALO_RS08465 0633d9f1df7db1801c76ecfe8ff5302b 92 SUPERFAMILY SSF158752 1 91 3.4E-24 T 11-11-2016 SHALO_RS08465 0633d9f1df7db1801c76ecfe8ff5302b 92 Gene3D G3DSA:1.10.3350.10 5 92 1.6E-18 T 11-11-2016 IPR023126 HP0242-like domain SHALO_RS08465 0633d9f1df7db1801c76ecfe8ff5302b 92 Pfam PF09442 Domain of unknown function (DUF2018) 10 92 1.2E-29 T 11-11-2016 IPR018563 Protein of unknown function DUF2018 SHALO_RS09630 371842f31f88eb414e1510754293da74 199 Pfam PF01810 LysE type translocator 13 197 3.0E-35 T 11-11-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 SHALO_RS02295 3640b6ac953458f71f2bca998f2f7d2b 299 Gene3D G3DSA:3.20.20.370 94 295 2.8E-7 T 11-11-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 SHALO_RS02295 3640b6ac953458f71f2bca998f2f7d2b 299 SUPERFAMILY SSF88713 101 285 1.89E-8 T 11-11-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 SHALO_RS08120 8b86e38b17a20f093a1134070c7b669e 237 Gene3D G3DSA:1.10.3130.10 5 68 4.1E-16 T 11-11-2016 SHALO_RS08120 8b86e38b17a20f093a1134070c7b669e 237 SUPERFAMILY SSF51161 6 181 5.68E-51 T 11-11-2016 IPR011004 Trimeric LpxA-like SHALO_RS08120 8b86e38b17a20f093a1134070c7b669e 237 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 10 172 4.0E-66 T 11-11-2016 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274 SHALO_RS08120 8b86e38b17a20f093a1134070c7b669e 237 Gene3D G3DSA:2.160.10.10 69 181 5.7E-33 T 11-11-2016 SHALO_RS08120 8b86e38b17a20f093a1134070c7b669e 237 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 123 156 3.5E-9 T 11-11-2016 IPR001451 Hexapeptide repeat SHALO_RS08120 8b86e38b17a20f093a1134070c7b669e 237 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 77 113 1.2E-5 T 11-11-2016 IPR001451 Hexapeptide repeat SHALO_RS06125 7e9f894bcb8108221a3c5cb62ee1db17 107 Pfam PF04319 NifZ domain 12 85 9.0E-28 T 11-11-2016 IPR007415 Nitrogenase MoFe maturation protein, NifZ GO:0009399 SHALO_RS09580 e95823f8554b4c94fe63fd67ffbf22a2 301 Pfam PF10543 ORF6N domain 15 100 9.7E-30 T 11-11-2016 IPR018873 KilA-N, DNA-binding domain SHALO_RS08395 80021b553ec86cf3fc947056ae761a83 232 Gene3D G3DSA:2.40.50.100 37 64 3.5E-12 T 11-11-2016 SHALO_RS08395 80021b553ec86cf3fc947056ae761a83 232 Gene3D G3DSA:2.40.50.100 123 155 3.5E-12 T 11-11-2016 SHALO_RS08395 80021b553ec86cf3fc947056ae761a83 232 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 27 212 2.1E-16 T 11-11-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SHALO_RS08395 80021b553ec86cf3fc947056ae761a83 232 SUPERFAMILY SSF111369 30 227 1.7E-14 T 11-11-2016 SHALO_RS10645 d7207c903d7fba75e18b14c4792ee99f 68 Pfam PF10262 Rdx family 1 63 1.7E-10 T 11-11-2016 IPR011893 Selenoprotein, Rdx type SHALO_RS10645 d7207c903d7fba75e18b14c4792ee99f 68 Gene3D G3DSA:3.40.30.10 1 62 4.8E-10 T 11-11-2016 IPR012336 Thioredoxin-like fold SHALO_RS10645 d7207c903d7fba75e18b14c4792ee99f 68 SUPERFAMILY SSF52833 2 64 3.58E-6 T 11-11-2016 IPR012336 Thioredoxin-like fold SHALO_RS06640 8042bb1c1359495cf13f01c987674a75 225 Gene3D G3DSA:3.10.20.30 4 99 8.5E-5 T 11-11-2016 IPR012675 Beta-grasp domain SHALO_RS04755 e0ae30c1fd2e78b188fb85a4932d3eaf 447 Pfam PF03573 outer membrane porin, OprD family 34 446 2.0E-10 T 11-11-2016 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 SHALO_RS04755 e0ae30c1fd2e78b188fb85a4932d3eaf 447 Gene3D G3DSA:2.40.160.10 34 447 2.1E-55 T 11-11-2016 IPR023614 Porin domain SHALO_RS05320 5382d587759e404278e4d3e2208a3e02 457 PIRSF PIRSF005522 4 457 4.0E-159 T 11-11-2016 IPR016450 Uncharacterised conserved protein UCP005522 SHALO_RS05320 5382d587759e404278e4d3e2208a3e02 457 SUPERFAMILY SSF56059 11 196 1.06E-40 T 11-11-2016 SHALO_RS05320 5382d587759e404278e4d3e2208a3e02 457 SUPERFAMILY SSF56059 300 446 1.06E-40 T 11-11-2016 SHALO_RS05320 5382d587759e404278e4d3e2208a3e02 457 Pfam PF14403 Circularly permuted ATP-grasp type 2 57 431 7.6E-134 T 11-11-2016 IPR025841 Circularly permuted ATP-grasp type 2 SHALO_RS10230 154ef823090962a5a2093f1a3c7f91d5 383 SUPERFAMILY SSF53756 50 328 2.83E-11 T 11-11-2016 SHALO_RS10230 154ef823090962a5a2093f1a3c7f91d5 383 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 34 196 1.3E-42 T 11-11-2016 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 SHALO_RS11775 53dcb0a2791ba179c04d8a44cffd44d8 232 Pfam PF08761 dUTPase 7 188 3.0E-35 T 11-11-2016 IPR014871 dUTPase/dCTP pyrophosphatase KEGG: 00240+3.6.1.12 SHALO_RS11775 53dcb0a2791ba179c04d8a44cffd44d8 232 SUPERFAMILY SSF101386 1 231 5.23E-69 T 11-11-2016 SHALO_RS06215 6455401ffb79fac07ff3d29a3b386bb7 384 Pfam PF01618 MotA/TolQ/ExbB proton channel family 126 206 3.5E-6 T 11-11-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 SHALO_RS14695 8952ccbf4bac5ad112bc5e5844bbc260 662 SUPERFAMILY SSF53756 350 638 3.56E-9 T 11-11-2016 SHALO_RS06480 51c5556d6fd62ec1bd2e207ea1139135 307 Gene3D G3DSA:1.25.40.10 219 285 8.5E-12 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SHALO_RS06480 51c5556d6fd62ec1bd2e207ea1139135 307 SMART SM00028 223 256 2.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SHALO_RS06480 51c5556d6fd62ec1bd2e207ea1139135 307 SMART SM00028 257 290 16.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SHALO_RS06480 51c5556d6fd62ec1bd2e207ea1139135 307 Pfam PF13181 Tetratricopeptide repeat 228 255 0.0097 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SHALO_RS06480 51c5556d6fd62ec1bd2e207ea1139135 307 SUPERFAMILY SSF48452 206 304 3.96E-11 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SHALO_RS10115 4724acb2df74998a5648bdf93fbafc15 262 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 1 195 2.3E-46 T 11-11-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 SHALO_RS10115 4724acb2df74998a5648bdf93fbafc15 262 SUPERFAMILY SSF55120 1 202 6.62E-55 T 11-11-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SHALO_RS10115 4724acb2df74998a5648bdf93fbafc15 262 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 11 158 2.4E-42 T 11-11-2016 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 SHALO_RS04655 d9d1d501065afd8134315fa7df488978 201 Pfam PF09335 SNARE associated Golgi protein 45 161 1.3E-29 T 11-11-2016 IPR032816 SNARE associated Golgi protein SHALO_RS10185 500996f7d19108344343b139b1f7a9f2 231 Pfam PF10670 Domain of unknown function (DUF4198) 27 207 5.6E-20 T 11-11-2016 IPR019613 Protein of unknown function DUF4198 SHALO_RS02910 a1f689a574f4240feca7034648dafe88 321 Gene3D G3DSA:1.10.3720.10 87 315 1.6E-16 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHALO_RS02910 a1f689a574f4240feca7034648dafe88 321 SUPERFAMILY SSF161098 89 306 3.4E-16 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHALO_RS02910 a1f689a574f4240feca7034648dafe88 321 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 318 8.4E-30 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHALO_RS00465 63a816520678e703bb36de9d369ba3de 524 Pfam PF02272 DHHA1 domain 337 400 5.0E-11 T 11-11-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 SHALO_RS00465 63a816520678e703bb36de9d369ba3de 524 Pfam PF01368 DHH family 52 180 1.1E-11 T 11-11-2016 IPR001667 DDH domain SHALO_RS00465 63a816520678e703bb36de9d369ba3de 524 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 17 519 3.1E-156 T 11-11-2016 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 SHALO_RS00465 63a816520678e703bb36de9d369ba3de 524 SUPERFAMILY SSF64182 27 407 4.97E-103 T 11-11-2016 SHALO_RS11115 161047a2ddeb8335944ea5345df8e0be 411 SUPERFAMILY SSF53448 9 250 1.41E-12 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases SHALO_RS01565 bfee0f00103c4a7ea087828b782d2e71 321 Gene3D G3DSA:1.20.1630.10 15 304 6.9E-12 T 11-11-2016 SHALO_RS01565 bfee0f00103c4a7ea087828b782d2e71 321 Pfam PF03916 Polysulphide reductase, NrfD 8 320 2.7E-79 T 11-11-2016 IPR005614 NrfD family SHALO_RS02830 1712934065ce277ab7420daf6782c839 266 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 189 211 3.5E-21 T 11-11-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 SHALO_RS02830 1712934065ce277ab7420daf6782c839 266 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 89 108 3.5E-21 T 11-11-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 SHALO_RS02830 1712934065ce277ab7420daf6782c839 266 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 30 51 3.5E-21 T 11-11-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 SHALO_RS02830 1712934065ce277ab7420daf6782c839 266 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 211 230 3.5E-21 T 11-11-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 SHALO_RS02830 1712934065ce277ab7420daf6782c839 266 Pfam PF01311 Bacterial export proteins, family 1 22 253 2.3E-55 T 11-11-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 SHALO_RS02830 1712934065ce277ab7420daf6782c839 266 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 21 261 4.9E-63 T 11-11-2016 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 SHALO_RS06330 196046dfd4f054a479bc069900eba587 307 Pfam PF14022 Protein of unknown function (DUF4238) 6 286 2.3E-30 T 11-11-2016 IPR025332 Protein of unknown function DUF4238 SHALO_RS07650 b5d45167a6d2a48be9989a121b71007b 214 Gene3D G3DSA:3.40.50.10230 4 211 5.8E-80 T 11-11-2016 IPR003722 Cobalamin (vitamin B12) biosynthesis CobH/CbiC, precorrin-8X methylmutase GO:0009236|GO:0016993 SHALO_RS07650 b5d45167a6d2a48be9989a121b71007b 214 SUPERFAMILY SSF63965 9 211 4.84E-69 T 11-11-2016 IPR003722 Cobalamin (vitamin B12) biosynthesis CobH/CbiC, precorrin-8X methylmutase GO:0009236|GO:0016993 SHALO_RS07650 b5d45167a6d2a48be9989a121b71007b 214 Pfam PF02570 Precorrin-8X methylmutase 10 206 5.0E-75 T 11-11-2016 IPR003722 Cobalamin (vitamin B12) biosynthesis CobH/CbiC, precorrin-8X methylmutase GO:0009236|GO:0016993 SHALO_RS03900 afdeca64e04842846b70144aedec1cf3 267 Gene3D G3DSA:3.40.50.150 4 151 3.4E-15 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS03900 afdeca64e04842846b70144aedec1cf3 267 Gene3D G3DSA:3.90.120.10 167 201 5.1E-4 T 11-11-2016 SHALO_RS03900 afdeca64e04842846b70144aedec1cf3 267 Pfam PF00145 C-5 cytosine-specific DNA methylase 6 103 1.6E-11 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS03900 afdeca64e04842846b70144aedec1cf3 267 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 50 62 - T 11-11-2016 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37|Reactome: R-HSA-212300|Reactome: R-HSA-5334118 SHALO_RS03900 afdeca64e04842846b70144aedec1cf3 267 SUPERFAMILY SSF53335 4 212 7.6E-27 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS05420 f7d76762bf42bb702203462079046967 219 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 17 216 1.3E-57 T 11-11-2016 IPR005744 Hly-III GO:0016021|GO:0019835 SHALO_RS05420 f7d76762bf42bb702203462079046967 219 Pfam PF03006 Haemolysin-III related 14 210 1.6E-34 T 11-11-2016 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 SHALO_RS01195 75361db09acb47cfa87261963f89f135 146 Gene3D G3DSA:3.90.870.10 22 146 1.1E-4 T 11-11-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain SHALO_RS01195 75361db09acb47cfa87261963f89f135 146 SUPERFAMILY SSF55821 22 146 2.9E-9 T 11-11-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain SHALO_RS05515 5c4157b2853685ab4c6132699fe26b61 188 Pfam PF01339 CheB methylesterase 6 181 2.8E-46 T 11-11-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 SHALO_RS05515 5c4157b2853685ab4c6132699fe26b61 188 SUPERFAMILY SSF52738 3 185 5.36E-46 T 11-11-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 SHALO_RS05515 5c4157b2853685ab4c6132699fe26b61 188 Gene3D G3DSA:3.40.50.180 2 184 4.0E-49 T 11-11-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 SHALO_RS14150 453276a1074ef349aafa6dcbf1eaae73 364 Pfam PF12698 ABC-2 family transporter protein 20 356 1.2E-38 T 11-11-2016 SHALO_RS14905 d95f269af992b1064919a5253ece3920 159 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase accessory protein [moaC]. 1 157 33.641 T 11-11-2016 IPR023046 Molybdenum cofactor biosynthesis C, bacterial-type Reactome: R-HSA-947581 SHALO_RS14905 d95f269af992b1064919a5253ece3920 159 Pfam PF01967 MoaC family 14 149 1.3E-49 T 11-11-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 Reactome: R-HSA-947581 SHALO_RS14905 d95f269af992b1064919a5253ece3920 159 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 3 151 7.1E-53 T 11-11-2016 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 Reactome: R-HSA-947581 SHALO_RS14905 d95f269af992b1064919a5253ece3920 159 SUPERFAMILY SSF55040 11 154 5.89E-55 T 11-11-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 Reactome: R-HSA-947581 SHALO_RS14905 d95f269af992b1064919a5253ece3920 159 Gene3D G3DSA:3.30.70.640 1 156 1.6E-60 T 11-11-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 Reactome: R-HSA-947581 SHALO_RS10350 2ca79dcec367e133ed2cfcd63b6c37f1 160 Pfam PF07603 Protein of unknown function (DUF1566) 32 160 1.4E-17 T 11-11-2016 IPR011460 Protein of unknown function DUF1566 SHALO_RS02550 55af6c985848ae66415b8d50895aa107 427 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 228 241 - T 11-11-2016 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS02550 55af6c985848ae66415b8d50895aa107 427 ProSitePatterns PS00667 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. 56 71 - T 11-11-2016 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS02550 55af6c985848ae66415b8d50895aa107 427 Pfam PF00146 NADH dehydrogenase 14 418 1.6E-102 T 11-11-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS02550 55af6c985848ae66415b8d50895aa107 427 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 5 425 22.844 T 11-11-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS14100 52621a906446cb27fc0a13126aa22ca1 89 Pfam PF02583 Metal-sensitive transcriptional repressor 7 86 6.2E-23 T 11-11-2016 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 SHALO_RS13490 17adbfdbab5604f471aac2548f8e8802 373 Pfam PF13458 Periplasmic binding protein 20 356 1.2E-53 T 11-11-2016 IPR028081 Leucine-binding protein domain SHALO_RS13490 17adbfdbab5604f471aac2548f8e8802 373 Gene3D G3DSA:3.40.50.2300 19 220 2.3E-47 T 11-11-2016 SHALO_RS13490 17adbfdbab5604f471aac2548f8e8802 373 SUPERFAMILY SSF53822 19 368 3.7E-64 T 11-11-2016 IPR028082 Periplasmic binding protein-like I SHALO_RS09115 21c08e1393891c4ae828461e10711413 257 Gene3D G3DSA:3.90.1720.10 68 215 5.4E-9 T 11-11-2016 IPR000064 Endopeptidase, NLPC/P60 domain SHALO_RS03365 af8c09ecdbeaac77768c80943c1f3e77 350 Gene3D G3DSA:3.40.50.2300 124 176 2.5E-4 T 11-11-2016 SHALO_RS03365 af8c09ecdbeaac77768c80943c1f3e77 350 Pfam PF13690 Chemotaxis phosphatase CheX 241 337 2.2E-13 T 11-11-2016 IPR028051 Chemotaxis phosphatase CheX-like domain SHALO_RS03365 af8c09ecdbeaac77768c80943c1f3e77 350 Gene3D G3DSA:3.40.1550.10 205 345 8.6E-16 T 11-11-2016 IPR028976 CheC-like domain SHALO_RS03365 af8c09ecdbeaac77768c80943c1f3e77 350 SUPERFAMILY SSF103039 204 346 1.96E-17 T 11-11-2016 IPR028976 CheC-like domain SHALO_RS04320 94508349bb4b3994efad5286d64ad228 188 Pfam PF03923 Uncharacterized lipoprotein 49 182 2.6E-10 T 11-11-2016 IPR005619 Uncharacterised protein family, YajG SHALO_RS11105 fd40e1f158a5d0447e5131c55b57349f 376 Gene3D G3DSA:3.40.50.720 2 132 8.2E-44 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS11105 fd40e1f158a5d0447e5131c55b57349f 376 Gene3D G3DSA:3.40.50.720 169 219 8.2E-44 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS11105 fd40e1f158a5d0447e5131c55b57349f 376 Pfam PF01370 NAD dependent epimerase/dehydratase family 6 284 6.1E-46 T 11-11-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 SHALO_RS11105 fd40e1f158a5d0447e5131c55b57349f 376 SUPERFAMILY SSF51735 2 132 2.29E-77 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS11105 fd40e1f158a5d0447e5131c55b57349f 376 SUPERFAMILY SSF51735 169 358 2.29E-77 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS11105 fd40e1f158a5d0447e5131c55b57349f 376 Gene3D G3DSA:3.90.25.10 220 359 1.3E-30 T 11-11-2016 SHALO_RS05020 eea5467ef627304dba4f6ee158853dbe 313 Gene3D G3DSA:3.40.190.10 111 242 1.2E-37 T 11-11-2016 SHALO_RS05020 eea5467ef627304dba4f6ee158853dbe 313 Pfam PF16868 NMT1-like family 27 310 6.8E-95 T 11-11-2016 IPR011852 TRAP transporter solute receptor, TAXI family SHALO_RS05020 eea5467ef627304dba4f6ee158853dbe 313 Gene3D G3DSA:3.40.190.10 243 311 1.1E-52 T 11-11-2016 SHALO_RS05020 eea5467ef627304dba4f6ee158853dbe 313 Gene3D G3DSA:3.40.190.10 22 102 1.1E-52 T 11-11-2016 SHALO_RS05020 eea5467ef627304dba4f6ee158853dbe 313 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 1 310 5.3E-110 T 11-11-2016 IPR011852 TRAP transporter solute receptor, TAXI family SHALO_RS05020 eea5467ef627304dba4f6ee158853dbe 313 SUPERFAMILY SSF53850 22 312 2.48E-75 T 11-11-2016 SHALO_RS10765 8b6e34ec314dfaacf4600dc2e8f69c19 261 SUPERFAMILY SSF69572 48 248 9.42E-57 T 11-11-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 SHALO_RS10765 8b6e34ec314dfaacf4600dc2e8f69c19 261 Pfam PF00899 ThiF family 50 250 2.5E-41 T 11-11-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 SHALO_RS10765 8b6e34ec314dfaacf4600dc2e8f69c19 261 Gene3D G3DSA:3.40.50.720 47 248 1.7E-48 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS11630 a657466cc5a9836a4ef53f0dbf46e6f3 187 Gene3D G3DSA:1.10.340.30 6 186 2.1E-75 T 11-11-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 SHALO_RS11630 a657466cc5a9836a4ef53f0dbf46e6f3 187 Pfam PF03352 Methyladenine glycosylase 10 185 8.4E-73 T 11-11-2016 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 SHALO_RS11630 a657466cc5a9836a4ef53f0dbf46e6f3 187 SUPERFAMILY SSF48150 6 186 4.08E-71 T 11-11-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 SHALO_RS09345 4066a11daeb23010672f941322d805da 170 Pfam PF01292 Prokaryotic cytochrome b561 3 169 3.2E-17 T 11-11-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 SHALO_RS09345 4066a11daeb23010672f941322d805da 170 SUPERFAMILY SSF81342 2 169 2.51E-16 T 11-11-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 SHALO_RS00100 ab1ff0510487787aa220d688b79c2147 209 SMART SM00671 160 195 1.5E-10 T 11-11-2016 IPR006597 Sel1-like repeat SHALO_RS00100 ab1ff0510487787aa220d688b79c2147 209 SMART SM00671 52 87 7.4E-12 T 11-11-2016 IPR006597 Sel1-like repeat SHALO_RS00100 ab1ff0510487787aa220d688b79c2147 209 SMART SM00671 88 123 4.5E-10 T 11-11-2016 IPR006597 Sel1-like repeat SHALO_RS00100 ab1ff0510487787aa220d688b79c2147 209 SMART SM00671 124 159 6.6E-8 T 11-11-2016 IPR006597 Sel1-like repeat SHALO_RS00100 ab1ff0510487787aa220d688b79c2147 209 Gene3D G3DSA:1.25.40.10 21 115 3.8E-28 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SHALO_RS00100 ab1ff0510487787aa220d688b79c2147 209 Gene3D G3DSA:1.25.40.10 116 204 1.0E-29 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SHALO_RS00100 ab1ff0510487787aa220d688b79c2147 209 Pfam PF08238 Sel1 repeat 52 86 1.2E-8 T 11-11-2016 IPR006597 Sel1-like repeat SHALO_RS00100 ab1ff0510487787aa220d688b79c2147 209 Pfam PF08238 Sel1 repeat 90 123 1.9E-7 T 11-11-2016 IPR006597 Sel1-like repeat SHALO_RS00100 ab1ff0510487787aa220d688b79c2147 209 Pfam PF08238 Sel1 repeat 126 159 1.5E-4 T 11-11-2016 IPR006597 Sel1-like repeat SHALO_RS00100 ab1ff0510487787aa220d688b79c2147 209 Pfam PF08238 Sel1 repeat 161 194 3.9E-8 T 11-11-2016 IPR006597 Sel1-like repeat SHALO_RS00100 ab1ff0510487787aa220d688b79c2147 209 SUPERFAMILY SSF81901 27 203 4.19E-49 T 11-11-2016 SHALO_RS07140 bd89532a2a72d4ca85075c041691556e 282 Pfam PF02618 YceG-like family 11 281 6.2E-57 T 11-11-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like SHALO_RS07140 bd89532a2a72d4ca85075c041691556e 282 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 68 280 9.9E-42 T 11-11-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like SHALO_RS07140 bd89532a2a72d4ca85075c041691556e 282 Gene3D G3DSA:3.30.160.60 255 281 2.2E-7 T 11-11-2016 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 SHALO_RS09815 4490e98960fc5365ba690ab1e4712d39 229 Pfam PF07277 SapC 10 227 6.2E-52 T 11-11-2016 IPR010836 SapC SHALO_RS04265 253f03cd3ef4e45cff5dad1db5ca93a2 408 Gene3D G3DSA:2.70.70.10 271 406 8.6E-22 T 11-11-2016 SHALO_RS04265 253f03cd3ef4e45cff5dad1db5ca93a2 408 Pfam PF01551 Peptidase family M23 321 389 5.1E-15 T 11-11-2016 IPR016047 Peptidase M23 SHALO_RS04265 253f03cd3ef4e45cff5dad1db5ca93a2 408 SUPERFAMILY SSF51261 236 405 1.05E-19 T 11-11-2016 IPR011055 Duplicated hybrid motif SHALO_RS03025 5b3aa88548ad6fc05908dc15aff86df7 1243 SUPERFAMILY SSF52540 207 382 8.21E-10 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS10705 4e3afede937d273a425cd75c9cd6703f 306 Pfam PF00146 NADH dehydrogenase 10 302 1.1E-48 T 11-11-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS03920 34bd52c7ca7960b626667cdfdf0aaddc 391 Pfam PF00263 Bacterial type II and III secretion system protein 236 388 1.0E-20 T 11-11-2016 IPR004846 Type II/III secretion system GO:0009306 SHALO_RS03570 5782d2641fff6ce961f05cebf17f8790 142 Gene3D G3DSA:3.40.30.10 9 123 3.1E-21 T 11-11-2016 IPR012336 Thioredoxin-like fold SHALO_RS03570 5782d2641fff6ce961f05cebf17f8790 142 SUPERFAMILY SSF52833 10 126 1.12E-24 T 11-11-2016 IPR012336 Thioredoxin-like fold SHALO_RS03570 5782d2641fff6ce961f05cebf17f8790 142 Pfam PF03960 ArsC family 71 102 1.9E-5 T 11-11-2016 IPR006660 Arsenate reductase-like SHALO_RS03585 3df35afbe3677967db14c9e0e0176f9d 275 Pfam PF03547 Membrane transport protein 2 110 5.8E-13 T 11-11-2016 IPR004776 Membrane transport protein GO:0016021|GO:0055085 SHALO_RS02020 90ca028632a38ccf0a5a4655e9499891 145 PIRSF PIRSF028687 1 145 1.2E-27 T 11-11-2016 IPR007293 Flagellar protein FlgP SHALO_RS09020 e4900b162e0dc46d69bae1b6dd6a5eec 156 Pfam PF13664 Domain of unknown function (DUF4149) 11 114 1.3E-10 T 11-11-2016 IPR025423 Domain of unknown function DUF4149 SHALO_RS11620 b7b976a017bb96ed0f03a35edcd8ef4e 197 SUPERFAMILY SSF54001 21 136 1.2E-20 T 11-11-2016 SHALO_RS11620 b7b976a017bb96ed0f03a35edcd8ef4e 197 Pfam PF01841 Transglutaminase-like superfamily 26 132 2.3E-13 T 11-11-2016 IPR002931 Transglutaminase-like SHALO_RS14145 c47c8f2bb58a99d5e809c3fbb5bc7851 244 Pfam PF01925 Sulfite exporter TauE/SafE 7 237 1.0E-27 T 11-11-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 SHALO_RS13515 3bf1b6ae9a7c8a9ca95fb5cbf1f4e1af 284 Pfam PF02754 Cysteine-rich domain 6 86 5.4E-12 T 11-11-2016 IPR004017 Cysteine-rich domain SHALO_RS13515 3bf1b6ae9a7c8a9ca95fb5cbf1f4e1af 284 Pfam PF02754 Cysteine-rich domain 145 235 3.8E-15 T 11-11-2016 IPR004017 Cysteine-rich domain SHALO_RS14400 876cadc1c54f9cab90ba2d29a34c02d4 153 SMART SM00450 42 136 2.6E-10 T 11-11-2016 IPR001763 Rhodanese-like domain SHALO_RS14400 876cadc1c54f9cab90ba2d29a34c02d4 153 Pfam PF00581 Rhodanese-like domain 50 127 2.7E-9 T 11-11-2016 IPR001763 Rhodanese-like domain SHALO_RS14400 876cadc1c54f9cab90ba2d29a34c02d4 153 SUPERFAMILY SSF52821 36 128 1.24E-21 T 11-11-2016 IPR001763 Rhodanese-like domain SHALO_RS14400 876cadc1c54f9cab90ba2d29a34c02d4 153 Gene3D G3DSA:3.40.250.10 43 128 9.5E-20 T 11-11-2016 IPR001763 Rhodanese-like domain SHALO_RS11565 215d4c1c65e621adb4779fcd7c712073 494 Pfam PF01384 Phosphate transporter family 201 481 4.5E-39 T 11-11-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 SHALO_RS11565 215d4c1c65e621adb4779fcd7c712073 494 Pfam PF01384 Phosphate transporter family 33 184 3.5E-31 T 11-11-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 SHALO_RS11395 c6974c409b69681917d7b405ce036aed 289 SUPERFAMILY SSF46626 165 272 8.61E-21 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS11395 c6974c409b69681917d7b405ce036aed 289 Gene3D G3DSA:1.20.5.100 257 289 1.3E-7 T 11-11-2016 SHALO_RS11395 c6974c409b69681917d7b405ce036aed 289 Pfam PF00034 Cytochrome c 52 156 1.5E-13 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS11395 c6974c409b69681917d7b405ce036aed 289 Gene3D G3DSA:1.10.760.10 47 156 5.6E-14 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS11395 c6974c409b69681917d7b405ce036aed 289 Gene3D G3DSA:1.10.760.10 165 252 3.3E-13 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS11395 c6974c409b69681917d7b405ce036aed 289 SUPERFAMILY SSF46626 30 157 1.31E-18 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS12450 cdd92bc231009d4fff64fae201a6fd65 122 TIGRFAM TIGR04485 thiosulf_SoxX: sulfur oxidation c-type cytochrome SoxX 45 117 1.2E-17 T 11-11-2016 IPR030999 Sulfur oxidation c-type cytochrome SoxX SHALO_RS12450 cdd92bc231009d4fff64fae201a6fd65 122 SUPERFAMILY SSF46626 4 118 2.88E-17 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS12450 cdd92bc231009d4fff64fae201a6fd65 122 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 32 117 1.6E-8 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS12450 cdd92bc231009d4fff64fae201a6fd65 122 Gene3D G3DSA:1.10.760.10 9 117 4.8E-19 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS11165 75ddaddfa885a764ec1e944f9bfa7ce6 365 Gene3D G3DSA:3.90.25.10 197 352 2.8E-41 T 11-11-2016 SHALO_RS11165 75ddaddfa885a764ec1e944f9bfa7ce6 365 Gene3D G3DSA:3.40.50.720 8 196 1.7E-44 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS11165 75ddaddfa885a764ec1e944f9bfa7ce6 365 SUPERFAMILY SSF51735 8 337 2.72E-64 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS11165 75ddaddfa885a764ec1e944f9bfa7ce6 365 TIGRFAM TIGR02622 CDP_4_6_dhtase: CDP-glucose 4,6-dehydratase 8 351 6.8E-145 T 11-11-2016 IPR013445 CDP-glucose 4,6-dehydratase KEGG: 00520+4.2.1.45|MetaCyc: PWY-5833 SHALO_RS11165 75ddaddfa885a764ec1e944f9bfa7ce6 365 Pfam PF16363 GDP-mannose 4,6 dehydratase 15 328 8.8E-37 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS12020 f0624de7edda2ed8d13ffa360a3af6c9 144 Pfam PF02050 Flagellar FliJ protein 17 134 7.1E-14 T 11-11-2016 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 SHALO_RS04135 ed0983166a70afa5620d3bd7c86d75ca 100 Hamap MF_02117 N(2)-fixation sustaining protein CowN [cowN]. 2 100 16.776 T 11-11-2016 IPR024899 Nitrogen fixation-sustaining protein CowN GO:0009399 SHALO_RS09310 0f50bb79b1aeaa70a9bb0b651ba74bc3 246 SUPERFAMILY SSF53335 7 197 2.03E-34 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS09310 0f50bb79b1aeaa70a9bb0b651ba74bc3 246 Pfam PF08241 Methyltransferase domain 44 136 8.5E-19 T 11-11-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 SHALO_RS09310 0f50bb79b1aeaa70a9bb0b651ba74bc3 246 Gene3D G3DSA:3.40.50.150 14 240 1.3E-37 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS02730 288c753418ab92ac9099d1c5793a39ae 133 Pfam PF02810 SEC-C motif 5 21 2.8E-7 T 11-11-2016 IPR004027 SEC-C motif SHALO_RS02730 288c753418ab92ac9099d1c5793a39ae 133 Gene3D G3DSA:3.10.450.50 6 131 1.8E-41 T 11-11-2016 IPR032710 NTF2-like domain SHALO_RS02730 288c753418ab92ac9099d1c5793a39ae 133 SUPERFAMILY SSF54427 26 131 1.93E-31 T 11-11-2016 IPR032710 NTF2-like domain SHALO_RS11855 418b278f32b879f7f1d45c3a211862a0 258 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 23 248 1.9E-33 T 11-11-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 SHALO_RS11855 418b278f32b879f7f1d45c3a211862a0 258 PIRSF PIRSF006157 1 258 4.7E-81 T 11-11-2016 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA type GO:0008270|GO:0016701|GO:0055114 SHALO_RS11855 418b278f32b879f7f1d45c3a211862a0 258 SUPERFAMILY SSF53213 6 256 1.7E-76 T 11-11-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 SHALO_RS11855 418b278f32b879f7f1d45c3a211862a0 258 Gene3D G3DSA:3.40.830.10 2 256 7.9E-79 T 11-11-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 SHALO_RS13995 051d1514599fd7925525964704304c64 413 Pfam PF03573 outer membrane porin, OprD family 106 216 6.1E-9 T 11-11-2016 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 SHALO_RS13995 051d1514599fd7925525964704304c64 413 Gene3D G3DSA:2.40.160.10 33 413 1.4E-36 T 11-11-2016 IPR023614 Porin domain SHALO_RS08180 a7bfe92af2c8a30dbf6471c8f2854b21 71 Pfam PF11381 Protein of unknown function (DUF3185) 10 67 1.1E-19 T 11-11-2016 IPR021521 Protein of unknown function DUF3185 SHALO_RS09030 d55846c00eb38fb01c548b07604a80fd 407 Gene3D G3DSA:3.30.2010.10 191 280 2.1E-18 T 11-11-2016 SHALO_RS09030 d55846c00eb38fb01c548b07604a80fd 407 Pfam PF01435 Peptidase family M48 196 395 5.2E-41 T 11-11-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 SHALO_RS09030 d55846c00eb38fb01c548b07604a80fd 407 Pfam PF16491 CAAX prenyl protease N-terminal, five membrane helices 38 193 3.6E-33 T 11-11-2016 IPR032456 CAAX prenyl protease 1, N-terminal KEGG: 00900+3.4.24.84 SHALO_RS00750 d4143258cee6e34b10cad401aef96216 244 Pfam PF00005 ABC transporter 23 172 2.2E-30 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHALO_RS00750 d4143258cee6e34b10cad401aef96216 244 SUPERFAMILY SSF52540 6 236 6.07E-60 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS00750 d4143258cee6e34b10cad401aef96216 244 Gene3D G3DSA:3.40.50.300 6 239 1.8E-64 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS00750 d4143258cee6e34b10cad401aef96216 244 SMART SM00382 31 221 4.8E-14 T 11-11-2016 IPR003593 AAA+ ATPase domain SHALO_RS00750 d4143258cee6e34b10cad401aef96216 244 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHALO_RS03690 50fa6f33712d06e26e2b54b72d93d1a9 509 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 9 505 5.2E-169 T 11-11-2016 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 SHALO_RS11705 af357ca7bd40ec7e30db96756da8b7a8 138 PIRSF PIRSF009554 2 138 9.9E-42 T 11-11-2016 IPR011194 Uncharacterised protein family UPF0306 SHALO_RS11705 af357ca7bd40ec7e30db96756da8b7a8 138 SUPERFAMILY SSF50475 5 129 3.31E-16 T 11-11-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 SHALO_RS11705 af357ca7bd40ec7e30db96756da8b7a8 138 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 4 87 9.6E-8 T 11-11-2016 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 SHALO_RS11705 af357ca7bd40ec7e30db96756da8b7a8 138 Gene3D G3DSA:2.30.110.10 8 128 1.6E-7 T 11-11-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 SHALO_RS11595 74fca5304163885786382d96d93a4a59 304 Pfam PF00892 EamA-like transporter family 18 151 1.9E-10 T 11-11-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SHALO_RS11595 74fca5304163885786382d96d93a4a59 304 Pfam PF00892 EamA-like transporter family 168 300 1.1E-12 T 11-11-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SHALO_RS11595 74fca5304163885786382d96d93a4a59 304 SUPERFAMILY SSF103481 209 301 5.89E-12 T 11-11-2016 SHALO_RS11595 74fca5304163885786382d96d93a4a59 304 SUPERFAMILY SSF103481 53 153 1.57E-7 T 11-11-2016 SHALO_RS10570 009d619bd1a7809dfc6993f483737556 426 PIRSF PIRSF005353 1 426 7.5E-145 T 11-11-2016 IPR026033 Purine permease PbuG-like SHALO_RS10570 009d619bd1a7809dfc6993f483737556 426 Pfam PF00860 Permease family 16 386 3.5E-36 T 11-11-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 SHALO_RS03760 385b15a4a846f64fc2723a1cc9f7b466 154 Gene3D G3DSA:1.10.10.10 15 95 1.0E-20 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS03760 385b15a4a846f64fc2723a1cc9f7b466 154 Pfam PF01475 Ferric uptake regulator family 23 142 2.4E-37 T 11-11-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 SHALO_RS03760 385b15a4a846f64fc2723a1cc9f7b466 154 SUPERFAMILY SSF46785 15 147 2.04E-33 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS13380 35a42d91081c73754a062e8869feb606 148 Pfam PF01618 MotA/TolQ/ExbB proton channel family 57 141 6.7E-32 T 11-11-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 SHALO_RS04665 9234a742352ee57be7b0bc3f9bfe30ad 286 Pfam PF00892 EamA-like transporter family 3 128 1.1E-6 T 11-11-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SHALO_RS04665 9234a742352ee57be7b0bc3f9bfe30ad 286 Pfam PF00892 EamA-like transporter family 139 266 1.7E-6 T 11-11-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SHALO_RS12465 7ca6c4a277070160d5743ed833744cb2 245 Pfam PF05448 Acetyl xylan esterase (AXE1) 19 152 9.4E-10 T 11-11-2016 IPR008391 Acetyl xylan esterase SHALO_RS12465 7ca6c4a277070160d5743ed833744cb2 245 Gene3D G3DSA:3.40.50.1820 16 227 5.5E-25 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold SHALO_RS12465 7ca6c4a277070160d5743ed833744cb2 245 SUPERFAMILY SSF53474 15 230 3.88E-25 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold SHALO_RS01150 df40a0585377cde8dafe1073fa54056d 154 Pfam PF00578 AhpC/TSA family 4 131 1.1E-41 T 11-11-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 SHALO_RS01150 df40a0585377cde8dafe1073fa54056d 154 SUPERFAMILY SSF52833 1 153 1.51E-55 T 11-11-2016 IPR012336 Thioredoxin-like fold SHALO_RS01150 df40a0585377cde8dafe1073fa54056d 154 PIRSF PIRSF000239 1 154 6.5E-30 T 11-11-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 SHALO_RS01150 df40a0585377cde8dafe1073fa54056d 154 Gene3D G3DSA:3.40.30.10 1 153 4.5E-55 T 11-11-2016 IPR012336 Thioredoxin-like fold SHALO_RS01540 64688d382faf156f3edc62f381c27dee 115 Pfam PF11756 Nitrous oxide-stimulated promoter 5 104 2.3E-13 T 11-11-2016 IPR020483 Uncharacterised protein family YgbA SHALO_RS01540 64688d382faf156f3edc62f381c27dee 115 ProDom PD075772 YGBA ECS3588 CYTOPLASMIC UVRA STM2860 AMIDOPHOSPHORIBOSYLTRANSFERASE VVA0912 SO0324 VPA0976 CPE0229 51 104 5.0E-14 T 11-11-2016 IPR020483 Uncharacterised protein family YgbA SHALO_RS03210 c3cf42ac2ca856cbe58715a1190140b4 294 Pfam PF02653 Branched-chain amino acid transport system / permease component 6 277 3.5E-39 T 11-11-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 SHALO_RS00565 f59bba435d6bed9a44ccb505be54eb85 577 Pfam PF02120 Flagellar hook-length control protein FliK 477 547 2.0E-7 T 11-11-2016 IPR021136 Flagellar hook-length control protein-like, C-terminal SHALO_RS10905 2f2dd837c7c163f5dee84e7e6437af90 75 Pfam PF11391 Protein of unknown function (DUF2798) 13 71 2.9E-23 T 11-11-2016 IPR021529 Protein of unknown function DUF2798 SHALO_RS06255 0f8e45c9017708cd954747985312a1ac 146 Pfam PF04773 FecR protein 56 142 3.8E-8 T 11-11-2016 IPR006860 FecR protein SHALO_RS00945 384b7e09c452fe6662b965e46e685f24 79 Pfam PF16514 putative NADH-ubiquinone oxidoreductase chain E 1 73 4.7E-39 T 11-11-2016 IPR032424 Putative NADH-ubiquinone oxidoreductase chain E SHALO_RS09260 9be0a15ffe5082a9c3af09c63b5bfb6e 443 Pfam PF02386 Cation transport protein 24 420 1.0E-52 T 11-11-2016 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 SHALO_RS09260 9be0a15ffe5082a9c3af09c63b5bfb6e 443 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 23 415 1.1E-102 T 11-11-2016 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 SHALO_RS08225 38e6efc204e20f24b3b56551613ffe63 283 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 11 281 4.4E-90 T 11-11-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 SHALO_RS08225 38e6efc204e20f24b3b56551613ffe63 283 Pfam PF05681 Fumarate hydratase (Fumerase) 11 281 5.2E-102 T 11-11-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 SHALO_RS00595 f506e2f88917f3a53562e29293ad68eb 239 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 106 234 6.9E-18 T 11-11-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 SHALO_RS00595 f506e2f88917f3a53562e29293ad68eb 239 SMART SM00047 90 222 5.6E-4 T 11-11-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 SHALO_RS00360 b6dd1401554309e6b829df6926654039 87 Gene3D G3DSA:1.10.10.10 27 81 5.0E-8 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHALO_RS00360 b6dd1401554309e6b829df6926654039 87 SUPERFAMILY SSF46955 28 80 3.48E-5 T 11-11-2016 IPR009061 Putative DNA-binding domain SHALO_RS06120 6575257a04b0018b783e1d9ec5996b33 110 Pfam PF03206 Nitrogen fixation protein NifW 3 78 3.4E-16 T 11-11-2016 IPR004893 Nitrogen fixation protein NifW GO:0009399 SHALO_RS01200 d9c0b9b3487e00089441a12282ec2640 81 Pfam PF04365 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 2 74 9.7E-20 T 11-11-2016 IPR007460 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system SHALO_RS00400 6247e8c68668173ddc2cd3c915e9c822 523 Pfam PF10412 Type IV secretion-system coupling protein DNA-binding domain 132 442 4.8E-33 T 11-11-2016 IPR019476 Type IV secretion system coupling protein TraD, DNA-binding domain SHALO_RS00400 6247e8c68668173ddc2cd3c915e9c822 523 SUPERFAMILY SSF52540 108 500 2.29E-24 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS00400 6247e8c68668173ddc2cd3c915e9c822 523 Gene3D G3DSA:3.40.50.300 127 192 6.1E-24 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS00400 6247e8c68668173ddc2cd3c915e9c822 523 Gene3D G3DSA:3.40.50.300 302 479 6.1E-24 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS06625 18eef81fdb1214a1f12f7eec6ce6591d 276 Pfam PF13289 SIR2-like domain 107 262 1.8E-6 T 11-11-2016 SHALO_RS12365 982115d52cdabc8fc8af29646212cfda 155 Pfam PF03975 CheD chemotactic sensory transduction 57 147 9.5E-25 T 11-11-2016 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 SHALO_RS12365 982115d52cdabc8fc8af29646212cfda 155 SUPERFAMILY SSF64438 5 153 3.66E-43 T 11-11-2016 IPR011324 Cytotoxic necrotizing factor-like, catalytic SHALO_RS12365 982115d52cdabc8fc8af29646212cfda 155 Hamap MF_01440 Chemoreceptor glutamine deamidase CheD [cheD]. 1 152 24.475 T 11-11-2016 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 SHALO_RS02695 241a89dbf2f497223c0786711bd525b8 197 Pfam PF10543 ORF6N domain 15 98 5.3E-31 T 11-11-2016 IPR018873 KilA-N, DNA-binding domain SHALO_RS10565 734b510ae8f7932da03dfe0f0ff60b2f 149 Pfam PF00156 Phosphoribosyl transferase domain 7 146 8.0E-24 T 11-11-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 SHALO_RS10565 734b510ae8f7932da03dfe0f0ff60b2f 149 SUPERFAMILY SSF53271 3 138 4.59E-24 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like SHALO_RS10565 734b510ae8f7932da03dfe0f0ff60b2f 149 Gene3D G3DSA:3.40.50.2020 3 144 9.2E-28 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like SHALO_RS04560 ad7a33d0082e7978a122d78ac364541c 796 Pfam PF01578 Cytochrome C assembly protein 558 758 5.1E-36 T 11-11-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 SHALO_RS04560 ad7a33d0082e7978a122d78ac364541c 796 Pfam PF05140 ResB-like family 80 186 6.3E-20 T 11-11-2016 IPR007816 ResB-like domain SHALO_RS07980 d74eb91e0a555530ace4cf997bab34a3 421 SUPERFAMILY SSF48452 272 394 4.93E-9 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SHALO_RS07980 d74eb91e0a555530ace4cf997bab34a3 421 Gene3D G3DSA:1.25.40.10 271 392 1.1E-5 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SHALO_RS07980 d74eb91e0a555530ace4cf997bab34a3 421 SUPERFAMILY SSF48452 37 194 4.93E-9 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SHALO_RS07980 d74eb91e0a555530ace4cf997bab34a3 421 Gene3D G3DSA:1.25.40.10 98 198 2.8E-10 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SHALO_RS07980 d74eb91e0a555530ace4cf997bab34a3 421 Gene3D G3DSA:1.25.40.10 39 65 2.8E-10 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SHALO_RS05750 a1bca61d1af2600c59b7fd2e14974b75 178 Pfam PF03748 Flagellar basal body-associated protein FliL 83 178 1.2E-26 T 11-11-2016 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 SHALO_RS09380 79a091cae2d0066db6dc6fb9e349e6e5 529 Pfam PF03929 PepSY-associated TM region 15 384 1.0E-27 T 11-11-2016 IPR005625 PepSY-associated TM protein SHALO_RS09120 b19253ccbd7a8446b9d22a9667ab1d2c 198 Pfam PF09997 Predicted membrane protein (DUF2238) 35 175 3.3E-56 T 11-11-2016 IPR014509 Uncharacterised conserved protein UCP020606 SHALO_RS09120 b19253ccbd7a8446b9d22a9667ab1d2c 198 PIRSF PIRSF020606 1 197 1.4E-73 T 11-11-2016 IPR014509 Uncharacterised conserved protein UCP020606 SHALO_RS04100 c9c7dee7e302a2caaca7d7bb9deee4b4 137 Pfam PF11026 Protein of unknown function (DUF2721) 6 121 3.2E-33 T 11-11-2016 IPR021279 Protein of unknown function DUF2721 SHALO_RS07975 1f78c131696d452a9c7aa4966ac4a9bf 126 Pfam PF03692 Putative zinc- or iron-chelating domain 18 120 5.0E-13 T 11-11-2016 IPR005358 Putative zinc- or iron-chelating domain containing protein SHALO_RS09500 a8db249fab7eb468e96cc2ebda8a5f28 683 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 4 681 9.3E-210 T 11-11-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SHALO_RS09500 a8db249fab7eb468e96cc2ebda8a5f28 683 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 5 548 5.2E-173 T 11-11-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SHALO_RS09500 a8db249fab7eb468e96cc2ebda8a5f28 683 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 2 681 22.423 T 11-11-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SHALO_RS09500 a8db249fab7eb468e96cc2ebda8a5f28 683 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 6 19 1.1E-30 T 11-11-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SHALO_RS09500 a8db249fab7eb468e96cc2ebda8a5f28 683 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 48 60 1.1E-30 T 11-11-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SHALO_RS09500 a8db249fab7eb468e96cc2ebda8a5f28 683 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 400 419 1.1E-30 T 11-11-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SHALO_RS09500 a8db249fab7eb468e96cc2ebda8a5f28 683 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 242 257 1.1E-30 T 11-11-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SHALO_RS09500 a8db249fab7eb468e96cc2ebda8a5f28 683 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 313 329 1.1E-30 T 11-11-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SHALO_RS13855 21929a3fd1846f2e1ca6bd47dbde35ca 404 Gene3D G3DSA:3.40.50.720 2 192 5.6E-30 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS13855 21929a3fd1846f2e1ca6bd47dbde35ca 404 SUPERFAMILY SSF51735 2 187 3.31E-16 T 11-11-2016 IPR016040 NAD(P)-binding domain SHALO_RS13855 21929a3fd1846f2e1ca6bd47dbde35ca 404 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 4 137 1.3E-32 T 11-11-2016 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 SHALO_RS13855 21929a3fd1846f2e1ca6bd47dbde35ca 404 Pfam PF16653 Saccharopine dehydrogenase C-terminal domain 141 387 1.6E-37 T 11-11-2016 IPR032095 Saccharopine dehydrogenase, C-terminal Reactome: R-HSA-71064 SHALO_RS12540 1b31000e3fc1d36df6ba464a557800eb 212 Pfam PF04012 PspA/IM30 family 6 149 8.8E-11 T 11-11-2016 IPR007157 PspA/IM30 SHALO_RS06580 a9b029111fb68617f677952f4313bf74 157 Gene3D G3DSA:3.10.50.40 2 68 4.2E-9 T 11-11-2016 SHALO_RS06580 a9b029111fb68617f677952f4313bf74 157 Gene3D G3DSA:3.10.50.40 126 145 4.2E-9 T 11-11-2016 SHALO_RS06580 a9b029111fb68617f677952f4313bf74 157 SUPERFAMILY SSF54534 3 144 1.04E-23 T 11-11-2016 SHALO_RS08175 48072b006b83c227117c2f3fd6e1b426 633 Gene3D G3DSA:2.40.10.220 506 622 3.1E-5 T 11-11-2016 SHALO_RS13630 312b912b85f4c3e71bd0ccfed6a32d27 160 Gene3D G3DSA:2.50.20.10 21 160 2.8E-4 T 11-11-2016 SHALO_RS05215 379c9b303368a2a1ceab9638dcdf0651 533 Gene3D G3DSA:1.10.287.950 286 502 2.0E-40 T 11-11-2016 SHALO_RS05215 379c9b303368a2a1ceab9638dcdf0651 533 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 343 530 2.2E-39 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SHALO_RS05215 379c9b303368a2a1ceab9638dcdf0651 533 SUPERFAMILY SSF58104 223 532 6.15E-54 T 11-11-2016 SHALO_RS05215 379c9b303368a2a1ceab9638dcdf0651 533 SMART SM00283 256 531 1.0E-36 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 SHALO_RS02080 a1bd2973dae3ad5a9f672dbc96c2eaa1 384 Gene3D G3DSA:3.30.70.270 130 223 3.0E-5 T 11-11-2016 SHALO_RS10990 cd8674b76ff640fd9fc5508d403c8e21 203 Pfam PF01184 GPR1/FUN34/yaaH family 9 186 1.1E-21 T 11-11-2016 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 SHALO_RS03625 b69164c3ac0d71de70363c5ebe008c4c 251 Pfam PF01925 Sulfite exporter TauE/SafE 8 238 7.1E-45 T 11-11-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 SHALO_RS04430 4701ed6ae454688b460705d86bf5520d 165 Gene3D G3DSA:3.40.50.300 3 163 9.5E-40 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS04430 4701ed6ae454688b460705d86bf5520d 165 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 6 117 9.1E-24 T 11-11-2016 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 SHALO_RS04430 4701ed6ae454688b460705d86bf5520d 165 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 7 159 4.6E-34 T 11-11-2016 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 SHALO_RS04430 4701ed6ae454688b460705d86bf5520d 165 SUPERFAMILY SSF52540 6 160 1.23E-17 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHALO_RS00845 46b24fd604ee59805306dbae93af756b 383 SUPERFAMILY SSF141371 256 316 9.02E-6 T 11-11-2016 SHALO_RS00845 46b24fd604ee59805306dbae93af756b 383 Pfam PF07238 PilZ domain 256 363 2.8E-5 T 11-11-2016 IPR009875 PilZ domain GO:0035438 SHALO_RS08355 52d1a56e533441c9733a35931c072bee 221 Gene3D G3DSA:3.40.30.10 5 212 6.0E-39 T 11-11-2016 IPR012336 Thioredoxin-like fold SHALO_RS08355 52d1a56e533441c9733a35931c072bee 221 SUPERFAMILY SSF52833 6 216 3.11E-41 T 11-11-2016 IPR012336 Thioredoxin-like fold SHALO_RS08355 52d1a56e533441c9733a35931c072bee 221 Pfam PF01323 DSBA-like thioredoxin domain 8 208 1.3E-26 T 11-11-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590 SHALO_RS07480 9a5e3c57ef109b461cff92e3089e70f2 217 Gene3D G3DSA:3.30.2210.10 137 212 2.8E-10 T 11-11-2016 SHALO_RS02930 f695ae65fb2a70ffd05ea6a1d44863d7 214 ProDom PD032436 LIPOPROTEIN UNCHARACTERIZED PROBABLE CJ0457C SIMILAR TRANSFERASE BACTERIA PRECURSOR SIGNAL CC0304 17 138 9.0E-25 T 11-11-2016 IPR007172 Domain of unknown function DUF374 SHALO_RS02930 f695ae65fb2a70ffd05ea6a1d44863d7 214 Pfam PF04028 Domain of unknown function (DUF374) 76 137 2.7E-25 T 11-11-2016 IPR007172 Domain of unknown function DUF374 SHALO_RS03215 b37b96ff55a0e827c36f7c516be65da2 342 Pfam PF02653 Branched-chain amino acid transport system / permease component 32 316 9.3E-36 T 11-11-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 SHALO_RS04140 f239f457aebd0825957b116e4883439a 126 Pfam PF01934 Protein of unknown function DUF86 15 117 3.8E-15 T 11-11-2016 IPR008201 Protein of unknown function DUF86 SHALO_RS04140 f239f457aebd0825957b116e4883439a 126 Gene3D G3DSA:1.20.120.580 61 125 8.4E-8 T 11-11-2016 SHALO_RS05030 5bb14fe36eadc43f1894e547edec8f38 125 Pfam PF08905 Domain of unknown function (DUF1850) 20 105 1.7E-26 T 11-11-2016 IPR015001 Protein of unknown function DUF1850 SHALO_RS07030 7470b86cd4e52f45b445535fa5a10808 132 Gene3D G3DSA:1.10.3680.10 6 110 9.3E-9 T 11-11-2016 IPR029024 TerB-like SHALO_RS07030 7470b86cd4e52f45b445535fa5a10808 132 SUPERFAMILY SSF158682 6 111 1.57E-14 T 11-11-2016 IPR029024 TerB-like SHALO_RS14165 9a863f73c977d58eef8eb1d85db1af7a 326 SUPERFAMILY SSF111369 44 123 8.76E-6 T 11-11-2016 SHALO_RS14165 9a863f73c977d58eef8eb1d85db1af7a 326 Gene3D G3DSA:2.40.50.100 202 233 8.7E-7 T 11-11-2016 SHALO_RS14165 9a863f73c977d58eef8eb1d85db1af7a 326 Gene3D G3DSA:2.40.50.100 47 75 8.7E-7 T 11-11-2016 SHALO_RS14165 9a863f73c977d58eef8eb1d85db1af7a 326 Pfam PF13437 HlyD family secretion protein 204 315 7.8E-13 T 11-11-2016 SHALO_RS14165 9a863f73c977d58eef8eb1d85db1af7a 326 SUPERFAMILY SSF111369 134 320 6.15E-6 T 11-11-2016 SHALO_RS08000 dc908fcda7d3d329aa7368708aebb2cb 248 Pfam PF10670 Domain of unknown function (DUF4198) 15 220 3.0E-49 T 11-11-2016 IPR019613 Protein of unknown function DUF4198 SHALO_RS02740 0a6e8eba77b4a4c346436b8810c2479e 142 SUPERFAMILY SSF49764 19 141 2.44E-38 T 11-11-2016 IPR008978 HSP20-like chaperone SHALO_RS02740 0a6e8eba77b4a4c346436b8810c2479e 142 Pfam PF00011 Hsp20/alpha crystallin family 42 142 1.8E-27 T 11-11-2016 IPR002068 Alpha crystallin/Hsp20 domain SHALO_RS02740 0a6e8eba77b4a4c346436b8810c2479e 142 Gene3D G3DSA:2.60.40.790 6 141 5.1E-38 T 11-11-2016 IPR008978 HSP20-like chaperone SHALO_RS02195 22ad6614bca955febe959ea985e7f1d2 107 Gene3D G3DSA:3.30.460.10 15 100 4.4E-7 T 11-11-2016 SHALO_RS02195 22ad6614bca955febe959ea985e7f1d2 107 Pfam PF01909 Nucleotidyltransferase domain 30 91 4.7E-6 T 11-11-2016 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 SHALO_RS02195 22ad6614bca955febe959ea985e7f1d2 107 SUPERFAMILY SSF81301 14 93 3.82E-8 T 11-11-2016 SHALO_RS13435 e8aa8f8f03a8686d0d56fc7efb8aa5e5 427 SUPERFAMILY SSF56935 298 427 5.49E-5 T 11-11-2016 SHALO_RS13435 e8aa8f8f03a8686d0d56fc7efb8aa5e5 427 SUPERFAMILY SSF56935 140 262 5.49E-5 T 11-11-2016 SHALO_RS10090 8d00ce86fe24d59b9ae941a8f8fdf9ff 102 Gene3D G3DSA:3.30.1390.10 9 101 7.2E-38 T 11-11-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like SHALO_RS10090 8d00ce86fe24d59b9ae941a8f8fdf9ff 102 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 11 97 25.651 T 11-11-2016 IPR022935 ATP-dependent Clp protease adaptor protein ClpS SHALO_RS10090 8d00ce86fe24d59b9ae941a8f8fdf9ff 102 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 19 97 1.3E-32 T 11-11-2016 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 SHALO_RS10090 8d00ce86fe24d59b9ae941a8f8fdf9ff 102 SUPERFAMILY SSF54736 17 101 9.94E-30 T 11-11-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like SHALO_RS06600 9401577de33d4e7c5087b03af467433e 707 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 473 601 1.2E-33 T 11-11-2016 IPR025299 CstA, C-terminal domain SHALO_RS06600 9401577de33d4e7c5087b03af467433e 707 Pfam PF02554 Carbon starvation protein CstA 36 405 2.7E-163 T 11-11-2016 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 SHALO_RS10900 f5e0146ae9953f0fee73b4147d9d742d 263 Pfam PF02582 Uncharacterised ACR, YagE family COG1723 86 215 5.7E-19 T 11-11-2016 IPR003734 Domain of unknown function DUF155 SHALO_RS04615 e6eabbcef28ec2a192a54e86f4d581cf 236 Pfam PF04172 LrgB-like family 21 233 2.8E-68 T 11-11-2016 IPR007300 CidB/LrgB family SHALO_RS09280 ba60fce4b5db80dbcc7a1a00b18288fa 193 Gene3D G3DSA:3.40.50.1240 3 188 2.7E-52 T 11-11-2016 IPR029033 Histidine phosphatase superfamily SHALO_RS09280 ba60fce4b5db80dbcc7a1a00b18288fa 193 SMART SM00855 4 153 1.4E-19 T 11-11-2016 IPR013078 Histidine phosphatase superfamily, clade-1 SHALO_RS09280 ba60fce4b5db80dbcc7a1a00b18288fa 193 SUPERFAMILY SSF53254 4 188 6.15E-52 T 11-11-2016 IPR029033 Histidine phosphatase superfamily SHALO_RS09280 ba60fce4b5db80dbcc7a1a00b18288fa 193 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 5 187 8.2E-51 T 11-11-2016 IPR013078 Histidine phosphatase superfamily, clade-1 SHALO_RS09280 ba60fce4b5db80dbcc7a1a00b18288fa 193 PIRSF PIRSF000709 2 192 9.3E-21 T 11-11-2016 SHALO_RS09055 865d208cf50bd5b923f467962c833493 98 Pfam PF01883 Domain of unknown function DUF59 4 77 9.5E-19 T 11-11-2016 IPR002744 Domain of unknown function DUF59 SHALO_RS09055 865d208cf50bd5b923f467962c833493 98 SUPERFAMILY SSF117916 1 95 6.21E-28 T 11-11-2016 SHALO_RS00210 98f82bdbcf3115f68a81171308d433dd 204 Gene3D G3DSA:3.40.50.150 5 182 4.3E-29 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS00210 98f82bdbcf3115f68a81171308d433dd 204 SUPERFAMILY SSF53335 6 203 1.67E-34 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHALO_RS00210 98f82bdbcf3115f68a81171308d433dd 204 Pfam PF13489 Methyltransferase domain 28 180 1.0E-18 T 11-11-2016 SHALO_RS11655 552983806ef19d67cec0b4ea3d6f1ba0 267 Pfam PF13852 Protein of unknown function (DUF4197) 43 266 6.1E-69 T 11-11-2016 IPR025245 Protein of unknown function DUF4197 SHALO_RS14190 b2944147fb6e6ea7a836d241979ded17 393 Pfam PF05538 Campylobacter major outer membrane protein 1 143 1.3E-10 T 11-11-2016 IPR008439 Campylobacter major outer membrane SHALO_RS14190 b2944147fb6e6ea7a836d241979ded17 393 Gene3D G3DSA:2.40.160.10 31 379 7.3E-30 T 11-11-2016 IPR023614 Porin domain SHALO_RS07990 9dae4b4b882b3a5a1571d397b8b5168e 163 Pfam PF01230 HIT domain 33 125 8.4E-15 T 11-11-2016 IPR001310 Histidine triad (HIT) protein SHALO_RS07990 9dae4b4b882b3a5a1571d397b8b5168e 163 SUPERFAMILY SSF54197 1 153 1.86E-35 T 11-11-2016 IPR011146 HIT-like domain GO:0003824 SHALO_RS07990 9dae4b4b882b3a5a1571d397b8b5168e 163 Gene3D G3DSA:3.30.428.10 19 141 6.8E-32 T 11-11-2016 IPR011146 HIT-like domain GO:0003824 SHALO_RS02575 9cbe0a504b2f13ac0ba456e0fde3eb8c 493 Pfam PF00361 Proton-conducting membrane transporter 126 416 8.1E-54 T 11-11-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS02575 9cbe0a504b2f13ac0ba456e0fde3eb8c 493 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 162 186 5.1E-27 T 11-11-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS02575 9cbe0a504b2f13ac0ba456e0fde3eb8c 493 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 132 151 5.1E-27 T 11-11-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS02575 9cbe0a504b2f13ac0ba456e0fde3eb8c 493 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 238 262 5.1E-27 T 11-11-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS02575 9cbe0a504b2f13ac0ba456e0fde3eb8c 493 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 326 345 5.1E-27 T 11-11-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS02575 9cbe0a504b2f13ac0ba456e0fde3eb8c 493 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 378 404 5.1E-27 T 11-11-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS02575 9cbe0a504b2f13ac0ba456e0fde3eb8c 493 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 6 483 6.6E-131 T 11-11-2016 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS11610 1a11648aac1598abb2d22e928c606cd0 157 Pfam PF04463 Protein of unknown function (DUF523) 6 144 3.3E-42 T 11-11-2016 IPR007553 Domain of unknown function DUF523 SHALO_RS03495 f9111ee6dbd7c16896a3047b06865fd5 233 SUPERFAMILY SSF53167 1 228 1.3E-66 T 11-11-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SHALO_RS03495 f9111ee6dbd7c16896a3047b06865fd5 233 Pfam PF01048 Phosphorylase superfamily 2 225 2.6E-48 T 11-11-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SHALO_RS03495 f9111ee6dbd7c16896a3047b06865fd5 233 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 2 226 1.1E-50 T 11-11-2016 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 SHALO_RS03495 f9111ee6dbd7c16896a3047b06865fd5 233 Gene3D G3DSA:3.40.50.1580 1 229 1.6E-72 T 11-11-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SHALO_RS02345 40551bff042f192ba6d7480a91434952 316 Pfam PF02653 Branched-chain amino acid transport system / permease component 32 292 2.6E-39 T 11-11-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 SHALO_RS12260 28bfb7714d4ebd68af3e598a0c03226f 177 PIRSF PIRSF017018 1 177 7.0E-71 T 11-11-2016 IPR018470 Periplasmic metal-binding protein Tp34-type SHALO_RS12260 28bfb7714d4ebd68af3e598a0c03226f 177 Pfam PF10634 Fe2+ transport protein 26 174 1.9E-66 T 11-11-2016 IPR018470 Periplasmic metal-binding protein Tp34-type SHALO_RS03790 f07d76e3302f4f33bbf254688d1cd7bf 336 Pfam PF13360 PQQ-like domain 75 189 1.1E-7 T 11-11-2016 IPR002372 Pyrrolo-quinoline quinone repeat SHALO_RS03790 f07d76e3302f4f33bbf254688d1cd7bf 336 Gene3D G3DSA:2.140.10.10 73 226 6.0E-6 T 11-11-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain SHALO_RS03790 f07d76e3302f4f33bbf254688d1cd7bf 336 SUPERFAMILY SSF50998 87 297 1.73E-10 T 11-11-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily SHALO_RS10610 044c9e281f4a1275871795cb28f6e468 124 Pfam PF13613 Helix-turn-helix of DDE superfamily endonuclease 21 71 1.3E-13 T 11-11-2016 IPR027805 Transposase, Helix-turn-helix domain SHALO_RS04260 a84d96f5386768f017dd1cdab10b0891 269 Pfam PF02687 FtsX-like permease family 151 266 7.0E-6 T 11-11-2016 IPR003838 ABC transporter permease protein domain GO:0016020 SHALO_RS07340 1734f11709e5ad843776c77b6605edf4 413 PRINTS PR00812 Bacterial general secretion pathway protein F signature 172 200 7.5E-10 T 11-11-2016 IPR003004 GspF/PilC family SHALO_RS07340 1734f11709e5ad843776c77b6605edf4 413 PRINTS PR00812 Bacterial general secretion pathway protein F signature 376 390 7.5E-10 T 11-11-2016 IPR003004 GspF/PilC family SHALO_RS07340 1734f11709e5ad843776c77b6605edf4 413 PRINTS PR00812 Bacterial general secretion pathway protein F signature 392 411 7.5E-10 T 11-11-2016 IPR003004 GspF/PilC family SHALO_RS07340 1734f11709e5ad843776c77b6605edf4 413 PRINTS PR00812 Bacterial general secretion pathway protein F signature 73 85 7.5E-10 T 11-11-2016 IPR003004 GspF/PilC family SHALO_RS07340 1734f11709e5ad843776c77b6605edf4 413 Pfam PF00482 Type II secretion system (T2SS), protein F 281 403 9.2E-24 T 11-11-2016 IPR018076 Type II secretion system F domain SHALO_RS07340 1734f11709e5ad843776c77b6605edf4 413 Pfam PF00482 Type II secretion system (T2SS), protein F 77 200 1.2E-26 T 11-11-2016 IPR018076 Type II secretion system F domain SHALO_RS12490 77c58f88b16d8363fbbe1f60afaf93c3 287 SUPERFAMILY SSF54001 98 229 1.84E-12 T 11-11-2016 SHALO_RS12490 77c58f88b16d8363fbbe1f60afaf93c3 287 Pfam PF01841 Transglutaminase-like superfamily 127 211 1.1E-6 T 11-11-2016 IPR002931 Transglutaminase-like SHALO_RS13610 e6b7c9e0c524e88f12c74bf3bac15488 286 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 104 283 4.7E-14 T 11-11-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 SHALO_RS00970 ad00bc6cf2e6fc78cc2ecc0999eff10f 184 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 20 161 2.2E-29 T 11-11-2016 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS06270 10a01d58257c7081f77ca9a45d8f8875 305 Gene3D G3DSA:3.40.50.1820 7 299 6.3E-65 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold SHALO_RS06270 10a01d58257c7081f77ca9a45d8f8875 305 PRINTS PR00412 Epoxide hydrolase signature 107 120 2.3E-9 T 11-11-2016 IPR000639 Epoxide hydrolase-like GO:0003824 SHALO_RS06270 10a01d58257c7081f77ca9a45d8f8875 305 PRINTS PR00412 Epoxide hydrolase signature 275 297 2.3E-9 T 11-11-2016 IPR000639 Epoxide hydrolase-like GO:0003824 SHALO_RS06270 10a01d58257c7081f77ca9a45d8f8875 305 PRINTS PR00412 Epoxide hydrolase signature 39 57 2.3E-9 T 11-11-2016 IPR000639 Epoxide hydrolase-like GO:0003824 SHALO_RS06270 10a01d58257c7081f77ca9a45d8f8875 305 SUPERFAMILY SSF53474 5 300 2.92E-70 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold SHALO_RS06270 10a01d58257c7081f77ca9a45d8f8875 305 Pfam PF00561 alpha/beta hydrolase fold 34 287 1.1E-23 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 SHALO_RS11955 05017613f7969f890cdbe786f35f088f 164 Pfam PF05751 FixH 12 143 8.0E-13 T 11-11-2016 IPR008620 Nitrogen fixation protein FixH SHALO_RS01960 d122baa087f4cd63f4b4e880abe8e059 309 SUPERFAMILY SSF53448 5 257 8.26E-37 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases SHALO_RS01960 d122baa087f4cd63f4b4e880abe8e059 309 Gene3D G3DSA:3.90.550.10 4 176 1.6E-24 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases SHALO_RS01960 d122baa087f4cd63f4b4e880abe8e059 309 Pfam PF00535 Glycosyl transferase family 2 7 150 6.9E-26 T 11-11-2016 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 SHALO_RS00695 3df73bc07044cf05c7ab64c16fc2292d 121 Gene3D G3DSA:1.10.3830.10 4 118 4.4E-33 T 11-11-2016 SHALO_RS00695 3df73bc07044cf05c7ab64c16fc2292d 121 Pfam PF01219 Prokaryotic diacylglycerol kinase 15 115 2.4E-27 T 11-11-2016 IPR000829 DAGK family GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 SHALO_RS04410 539beb2f8a13623fd505e1c8083a9718 334 Gene3D G3DSA:3.40.1390.10 22 88 6.9E-4 T 11-11-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 SHALO_RS00410 7d3c125a585bb7a5b027ad2b34573ff2 111 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 20 108 8.5E-20 T 11-11-2016 IPR009241 Toxin HigB-like SHALO_RS11885 3cd0ee08f4ef77d898d23bef8fc479ac 209 Pfam PF07277 SapC 31 158 6.1E-6 T 11-11-2016 IPR010836 SapC SHALO_RS11885 3cd0ee08f4ef77d898d23bef8fc479ac 209 Pfam PF03692 Putative zinc- or iron-chelating domain 20 111 2.6E-7 T 11-11-2016 IPR005358 Putative zinc- or iron-chelating domain containing protein SHALO_RS06465 e3d7cd184343e0800969f070df2b7dc6 155 SUPERFAMILY SSF53098 2 151 1.26E-16 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SHALO_RS06465 e3d7cd184343e0800969f070df2b7dc6 155 Pfam PF00075 RNase H 3 129 2.6E-12 T 11-11-2016 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 SHALO_RS06465 e3d7cd184343e0800969f070df2b7dc6 155 Gene3D G3DSA:3.30.420.10 2 137 1.4E-14 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SHALO_RS01185 99734af484f2391905e882e8a63dad4d 248 Pfam PF04085 rod shape-determining protein MreC 152 245 2.5E-13 T 11-11-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 SHALO_RS14155 96c11ebe1784877f9b89d85ba4e6efb9 363 Pfam PF12698 ABC-2 family transporter protein 24 355 2.8E-40 T 11-11-2016 SHALO_RS05335 419ac3c37db451557e4917939d7e78aa 254 Pfam PF06738 Putative threonine/serine exporter 12 248 1.4E-53 T 11-11-2016 IPR010619 Putative threonine/serine exporter SHALO_RS15160 8a24e8199be10a8fb96418e07c890b49 88 Pfam PF13711 Domain of unknown function (DUF4160) 9 71 6.4E-21 T 11-11-2016 IPR025427 Protein of unknown function DUF4160 SHALO_RS04460 e61a7ea5d0b20049514fa8644c198fe1 454 SUPERFAMILY SSF53474 50 200 7.84E-14 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold SHALO_RS04460 e61a7ea5d0b20049514fa8644c198fe1 454 SUPERFAMILY SSF53474 319 413 7.84E-14 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold SHALO_RS04460 e61a7ea5d0b20049514fa8644c198fe1 454 Gene3D G3DSA:3.40.50.1820 62 192 1.7E-10 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold SHALO_RS04460 e61a7ea5d0b20049514fa8644c198fe1 454 Gene3D G3DSA:3.40.50.1820 338 410 1.7E-10 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold SHALO_RS12990 f9296033b2d9f8d888cab13980280964 91 SUPERFAMILY SSF143011 1 91 1.83E-19 T 11-11-2016 SHALO_RS12990 f9296033b2d9f8d888cab13980280964 91 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 4 91 4.6E-7 T 11-11-2016 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family SHALO_RS12990 f9296033b2d9f8d888cab13980280964 91 Pfam PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ 3 90 3.8E-8 T 11-11-2016 IPR004386 Toxin-antitoxin system, YafQ-like toxin SHALO_RS03460 edc13f2a8beb5e80328a56d72d808b3f 257 Pfam PF13103 TonB C terminal 169 252 8.5E-14 T 11-11-2016 IPR006260 TonB, C-terminal GO:0006810 SHALO_RS08985 2248b6c8433adcb4bf6240dff4e8efe5 435 Pfam PF02646 RmuC family 111 407 2.4E-96 T 11-11-2016 IPR003798 DNA recombination RmuC SHALO_RS06885 7df1b1ae3ca0ea498623e7b5fddccc7a 66 SUPERFAMILY SSF101498 16 63 1.05E-6 T 11-11-2016 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 SHALO_RS06885 7df1b1ae3ca0ea498623e7b5fddccc7a 66 Pfam PF04316 Anti-sigma-28 factor, FlgM 32 60 1.1E-6 T 11-11-2016 IPR031316 Anti-sigma-28 factor FlgM, C-terminal SHALO_RS03185 08d95dda91dc98106c22baf397c2f04d 86 SUPERFAMILY SSF143011 1 85 2.22E-24 T 11-11-2016 SHALO_RS03185 08d95dda91dc98106c22baf397c2f04d 86 TIGRFAM TIGR02116 toxin_Txe_YoeB: addiction module toxin, Txe/YoeB family 5 86 5.0E-30 T 11-11-2016 IPR009614 Toxin YoeB GO:0004519|GO:0006401 SHALO_RS03185 08d95dda91dc98106c22baf397c2f04d 86 Pfam PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system 5 86 1.9E-34 T 11-11-2016 IPR009614 Toxin YoeB GO:0004519|GO:0006401 SHALO_RS08830 98fcf60ee3981a48243f4bca567c2d7e 119 SUPERFAMILY SSF48695 24 101 2.4E-10 T 11-11-2016 IPR011031 Multihaem cytochrome SHALO_RS08830 98fcf60ee3981a48243f4bca567c2d7e 119 Gene3D G3DSA:3.90.10.10 25 97 1.4E-7 T 11-11-2016 SHALO_RS05785 3c7525a9f977759659a82a238cd130ae 221 Pfam PF04366 Las17-binding protein actin regulator 96 201 3.3E-28 T 11-11-2016 IPR007461 Ysc84 actin-binding domain SHALO_RS13030 2f8247ff6e0ff9b647d026e37bd6db29 701 Pfam PF01618 MotA/TolQ/ExbB proton channel family 103 196 4.3E-5 T 11-11-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 SHALO_RS06540 df1cf561e29c4f5d481380ac57f156e3 138 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 16 127 6.0E-22 T 11-11-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS06540 df1cf561e29c4f5d481380ac57f156e3 138 SUPERFAMILY SSF56770 6 135 7.85E-38 T 11-11-2016 SHALO_RS06540 df1cf561e29c4f5d481380ac57f156e3 138 Gene3D G3DSA:3.40.50.700 5 129 6.1E-25 T 11-11-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SHALO_RS04530 036ff9a08125fa7f43dfe6ee5e586ca6 266 Gene3D G3DSA:3.40.190.10 27 127 4.5E-12 T 11-11-2016 SHALO_RS04530 036ff9a08125fa7f43dfe6ee5e586ca6 266 Pfam PF13531 Bacterial extracellular solute-binding protein 27 254 8.7E-23 T 11-11-2016 SHALO_RS04530 036ff9a08125fa7f43dfe6ee5e586ca6 266 SUPERFAMILY SSF53850 26 257 6.21E-29 T 11-11-2016 SHALO_RS12475 91c1a360f832845bb820803c07064c64 132 Gene3D G3DSA:3.40.30.10 24 130 2.7E-23 T 11-11-2016 IPR012336 Thioredoxin-like fold SHALO_RS12475 91c1a360f832845bb820803c07064c64 132 SUPERFAMILY SSF52833 12 130 4.31E-24 T 11-11-2016 IPR012336 Thioredoxin-like fold SHALO_RS12475 91c1a360f832845bb820803c07064c64 132 Pfam PF13899 Thioredoxin-like 25 101 1.6E-12 T 11-11-2016 SHALO_RS01740 c441b7a0bb975a885fc285d100fc2b23 275 Pfam PF12679 ABC-2 family transporter protein 7 274 1.6E-19 T 11-11-2016 IPR032688 ABC-2 family transporter protein GO:0006810 SHALO_RS11250 6b36ea09c1edcd899073acf8519406d4 324 Pfam PF00534 Glycosyl transferases group 1 135 298 1.9E-14 T 11-11-2016 IPR001296 Glycosyl transferase, family 1 SHALO_RS11250 6b36ea09c1edcd899073acf8519406d4 324 SUPERFAMILY SSF53756 72 304 1.73E-27 T 11-11-2016 SHALO_RS00350 7f59a8ece6d33b1e72943825dc765484 138 Pfam PF07022 Bacteriophage CI repressor helix-turn-helix domain 7 42 1.0E-4 T 11-11-2016 IPR010744 Bacteriophage CI repressor GO:0003677|GO:0045892 SHALO_RS00350 7f59a8ece6d33b1e72943825dc765484 138 Gene3D G3DSA:1.10.260.40 7 44 3.0E-4 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SHALO_RS11230 23a6a7c0061c0c5c0877ab63336cd5a1 107 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 1 104 8.4E-19 T 11-11-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 SHALO_RS10580 3829dcc1f8a3cd7932050b4560201caa 134 Pfam PF03994 Domain of Unknown Function (DUF350) 13 66 1.4E-10 T 11-11-2016 IPR007140 Protein of unknown function DUF350 SHALO_RS10580 3829dcc1f8a3cd7932050b4560201caa 134 Pfam PF03994 Domain of Unknown Function (DUF350) 78 132 5.9E-9 T 11-11-2016 IPR007140 Protein of unknown function DUF350 SHALO_RS14835 e0d814cfb6105d05da5784533139616a 150 Gene3D G3DSA:3.40.630.30 37 148 4.0E-22 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase SHALO_RS14835 e0d814cfb6105d05da5784533139616a 150 Pfam PF00583 Acetyltransferase (GNAT) family 52 126 2.7E-10 T 11-11-2016 IPR000182 GNAT domain GO:0008080 SHALO_RS14835 e0d814cfb6105d05da5784533139616a 150 SUPERFAMILY SSF55729 31 148 1.1E-21 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase SHALO_RS11690 24c9613c168390b5d5bbddb7ea21955b 607 Pfam PF02690 Na+/Pi-cotransporter 198 279 5.5E-11 T 11-11-2016 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 SHALO_RS11690 24c9613c168390b5d5bbddb7ea21955b 607 Pfam PF02690 Na+/Pi-cotransporter 32 171 5.1E-35 T 11-11-2016 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 SHALO_RS04705 f364a449c6f9c73434ca62e15464ac64 160 SUPERFAMILY SSF55729 1 160 1.95E-24 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase SHALO_RS04705 f364a449c6f9c73434ca62e15464ac64 160 Pfam PF00583 Acetyltransferase (GNAT) family 54 133 2.6E-8 T 11-11-2016 IPR000182 GNAT domain GO:0008080 SHALO_RS04705 f364a449c6f9c73434ca62e15464ac64 160 Gene3D G3DSA:3.40.630.30 1 160 7.5E-26 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase SHALO_RS12000 133dd5eceb430d4ed1d1ef3be2885f2e 226 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 9 215 4.5E-52 T 11-11-2016 SHALO_RS04620 998c178f70345524773d57816c5e7795 115 Pfam PF03788 LrgA family 12 104 3.8E-22 T 11-11-2016 IPR005538 LrgA/CidA family GO:0016021 SHALO_RS03670 15d650c411dfd6fe588d481cbb6c6941 167 Pfam PF07813 LTXXQ motif family protein 60 149 2.8E-9 T 11-11-2016 IPR012899 LTXXQ motif family protein GO:0042597 SHALO_RS05695 1ea477371d1d410f1a7fac1f23f6e4c8 267 Pfam PF01925 Sulfite exporter TauE/SafE 10 262 7.7E-51 T 11-11-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 SHALO_RS05525 69d9ca4a38ca092caaca92fee592501c 237 Pfam PF09335 SNARE associated Golgi protein 62 177 7.8E-13 T 11-11-2016 IPR032816 SNARE associated Golgi protein SHALO_RS03695 b94ad8fd2b5e459ad9076dd777a6edb9 377 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 10 359 4.8E-65 T 11-11-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 SHALO_RS03845 cd8c81a7b8aab0238321608fa7448496 449 Pfam PF03600 Citrate transporter 40 392 7.1E-39 T 11-11-2016 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 SHALO_RS10020 8da04d8aa781d46daf12215913b494ce 130 Pfam PF04519 Polymer-forming cytoskeletal 18 113 2.3E-20 T 11-11-2016 IPR007607 Protein of unknown function DUF583 SHALO_RS05155 7b9a1751c30dd2857f6b3d90d7915612 124 SUPERFAMILY SSF143120 67 110 3.92E-5 T 11-11-2016 SHALO_RS05725 abf69fb94c8984b35a59c3864b59d8d9 202 Pfam PF03458 UPF0126 domain 6 74 3.4E-18 T 11-11-2016 IPR005115 Uncharacterised domain UPF0126 SHALO_RS05725 abf69fb94c8984b35a59c3864b59d8d9 202 Pfam PF03458 UPF0126 domain 94 167 3.0E-22 T 11-11-2016 IPR005115 Uncharacterised domain UPF0126 SHALO_RS07215 4a5d5e6ba8e9adfc1386f57deacaed75 201 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 3 196 2.6E-34 T 11-11-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 SHALO_RS07215 4a5d5e6ba8e9adfc1386f57deacaed75 201 Pfam PF01914 MarC family integral membrane protein 5 199 1.2E-37 T 11-11-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 SHALO_RS08555 31d17e8271c18e50dbac158adc1c7a67 170 SUPERFAMILY SSF54637 49 143 2.21E-14 T 11-11-2016 IPR029069 HotDog domain SHALO_RS08555 31d17e8271c18e50dbac158adc1c7a67 170 Gene3D G3DSA:3.10.129.10 31 152 2.7E-19 T 11-11-2016 IPR029069 HotDog domain SHALO_RS11235 42fd89f88cbee65eca6cd0c090b7303a 297 Pfam PF06258 Mitochondrial fission ELM1 12 281 2.6E-38 T 11-11-2016 IPR009367 Mitochondrial fission protein ELM1-like SHALO_RS01625 167781cf5e45d5da78ef60ccec3360ef 256 Pfam PF05818 Enterobacterial TraT complement resistance protein 25 256 2.8E-69 T 11-11-2016 IPR008874 Enterobacterial TraT complement resistance GO:0019867|GO:0046999 SHALO_RS11930 8c702b8f8b39ff4081ebdfe6bf03d287 97 Pfam PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system 20 92 1.0E-28 T 11-11-2016 IPR018669 Toxin-antitoxin system, toxin component, HigB, putative GO:0016788 SHALO_RS12340 79da9cfed8a5b17576ceda98798d19b1 199 Gene3D G3DSA:3.40.1550.10 6 198 1.1E-31 T 11-11-2016 IPR028976 CheC-like domain SHALO_RS12340 79da9cfed8a5b17576ceda98798d19b1 199 SUPERFAMILY SSF103039 5 197 2.88E-28 T 11-11-2016 IPR028976 CheC-like domain SHALO_RS03190 8743b76577d45f40b619661ed7dc4c4f 424 Pfam PF05538 Campylobacter major outer membrane protein 1 409 4.1E-9 T 11-11-2016 IPR008439 Campylobacter major outer membrane SHALO_RS03190 8743b76577d45f40b619661ed7dc4c4f 424 Gene3D G3DSA:2.40.160.10 33 424 1.9E-41 T 11-11-2016 IPR023614 Porin domain SHALO_RS05410 4e2f3ed9e1bec09802a04157978247e7 328 Pfam PF01757 Acyltransferase family 13 315 8.9E-15 T 11-11-2016 IPR002656 Acyltransferase 3 GO:0016747 SHALO_RS13225 e1877b55ccbbd5c228aa526ac138e118 126 Pfam PF01618 MotA/TolQ/ExbB proton channel family 31 121 9.7E-24 T 11-11-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 SHALO_RS12680 5bd71fa343532302997d3974a7aec0f7 127 Pfam PF02472 Biopolymer transport protein ExbD/TolR 7 124 1.1E-21 T 11-11-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 SHALO_RS11920 0909f7bf8d92112e766871e44a814454 282 Pfam PF01609 Transposase DDE domain 99 267 3.3E-15 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 SHALO_RS11580 0909f7bf8d92112e766871e44a814454 282 Pfam PF01609 Transposase DDE domain 99 267 3.3E-15 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 SHALO_RS04370 deca29c1c9e1243d185b090472a97d19 178 Gene3D G3DSA:2.60.450.10 105 166 2.9E-4 T 11-11-2016 SHALO_RS12510 0f0e3dc6ebc1b1ea95c3d6339ce9f2ca 328 Pfam PF13310 Virulence protein RhuM family 62 308 1.1E-101 T 11-11-2016 IPR011204 Virulence protein RhuM-like SHALO_RS12510 0f0e3dc6ebc1b1ea95c3d6339ce9f2ca 328 PIRSF PIRSF015268 1 327 2.8E-126 T 11-11-2016 IPR011204 Virulence protein RhuM-like SHALO_RS03455 a27faa3ea4549335fc07f09669cae3b8 130 Pfam PF02472 Biopolymer transport protein ExbD/TolR 7 128 1.3E-24 T 11-11-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 SHALO_RS10250 b6cf2f4db6f196fafe353a7009b6aa24 162 Pfam PF13118 Protein of unknown function (DUF3972) 9 133 8.0E-47 T 11-11-2016 IPR025002 Domain of unknown function DUF3972 SHALO_RS14365 6bd5019ba7ddc8d89fba3bed217ee1e4 235 Gene3D G3DSA:1.10.760.10 54 118 2.5E-4 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 SHALO_RS03910 4cf5265e010858a19a3e8b6367a4d142 448 Pfam PF05840 Bacteriophage replication gene A protein (GPA) 34 170 3.8E-15 T 11-11-2016 IPR008766 Replication gene A protein GO:0006260 SHALO_RS06630 f86d31497735cec47185a6b2e4c60556 130 Gene3D G3DSA:2.60.40.730 3 129 6.1E-28 T 11-11-2016 SHALO_RS06630 f86d31497735cec47185a6b2e4c60556 130 SUPERFAMILY SSF49367 14 122 5.36E-26 T 11-11-2016 IPR002742 Desulfoferrodoxin, ferrous iron-binding domain GO:0005506|GO:0016491|GO:0055114 SHALO_RS06630 f86d31497735cec47185a6b2e4c60556 130 Pfam PF01880 Desulfoferrodoxin 22 121 7.6E-25 T 11-11-2016 IPR002742 Desulfoferrodoxin, ferrous iron-binding domain GO:0005506|GO:0016491|GO:0055114 SHALO_RS01680 bbc1269656d486bd698edef720253ecf 342 Pfam PF03601 Conserved hypothetical protein 698 13 321 2.1E-100 T 11-11-2016 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 SHALO_RS01680 bbc1269656d486bd698edef720253ecf 342 TIGRFAM TIGR00698 TIGR00698: conserved hypothetical protein 12 336 3.6E-100 T 11-11-2016 IPR004630 Uncharacterised protein family UPF0324, bacteria GO:0016021 SHALO_RS03950 5b94066c126f3327ebea07a21e3b719e 83 Gene3D G3DSA:1.10.10.700 4 44 1.9E-6 T 11-11-2016 SHALO_RS09940 3b642d8a7cc93820ed3d5601bace6189 140 SUPERFAMILY SSF54523 1 126 1.26E-10 T 11-11-2016 SHALO_RS04595 dde183acb73c98f9f6ef8965a5cb2d92 475 Gene3D G3DSA:2.40.160.10 42 474 1.3E-24 T 11-11-2016 IPR023614 Porin domain SHALO_RS08705 8af5988b8a65fbc1a6141d3abcd9c168 183 Pfam PF12163 DNA replication regulator 1 179 2.6E-76 T 11-11-2016 IPR021011 DNA replication regulator, HobA SHALO_RS01730 9bed60bb03e7939407c80babc91223d7 410 Pfam PF05940 NnrS protein 22 404 1.2E-62 T 11-11-2016 IPR010266 NnrS SHALO_RS14095 08f680599bab7b9db2436c5b2a9d8e01 73 Pfam PF09851 Short C-terminal domain 45 71 6.1E-8 T 11-11-2016 IPR018649 SHOCT domain SHALO_RS14105 1620423883738e298162658eb6bde94c 278 SUPERFAMILY SSF103473 157 242 1.7E-5 T 11-11-2016 IPR020846 Major facilitator superfamily domain SHALO_RS14105 1620423883738e298162658eb6bde94c 278 SUPERFAMILY SSF103473 4 126 1.7E-5 T 11-11-2016 IPR020846 Major facilitator superfamily domain SHALO_RS14105 1620423883738e298162658eb6bde94c 278 Pfam PF03824 High-affinity nickel-transport protein 16 268 1.6E-39 T 11-11-2016 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 SHALO_RS14510 5b044d22fb677bbe69aa3d77082bc1d1 247 Pfam PF03741 Integral membrane protein TerC family 15 205 1.1E-51 T 11-11-2016 IPR005496 Integral membrane protein TerC GO:0016021 SHALO_RS12520 bc0aee606ec7a193535e83176dc9a683 327 Pfam PF04245 37-kD nucleoid-associated bacterial protein 7 290 8.2E-30 T 11-11-2016 IPR007358 Nucleoid-associated protein NdpA GO:0009295 SHALO_RS03415 b7a45457aef3175b4ddbda30b2750efa 140 Pfam PF00430 ATP synthase B/B' CF(0) 14 122 6.6E-16 T 11-11-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 SHALO_RS05790 ec24b4ac11771af78d16992ca9cfd65d 187 Pfam PF09335 SNARE associated Golgi protein 25 139 5.0E-14 T 11-11-2016 IPR032816 SNARE associated Golgi protein SHALO_RS14405 699131e06b0bf64d67bd0af984b50af5 316 Pfam PF03773 Predicted permease 23 313 4.2E-68 T 11-11-2016 IPR005524 Predicted permease DUF318 SHALO_RS10535 577c27a1cf003b5705f824c0e55b9aef 502 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 21 441 1.7E-144 T 11-11-2016 IPR002823 Protein of unknown function DUF112, transmembrane SHALO_RS13710 a2454da077d3181f91c47ad87dae8070 112 Pfam PF02411 MerT mercuric transport protein 8 105 1.1E-8 T 11-11-2016 IPR003457 Mercuric transport protein MerT GO:0015097|GO:0015694|GO:0016020 SHALO_RS14415 c46880585581a162f58efc3612664b2f 235 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 23 228 8.0E-16 T 11-11-2016 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 SHALO_RS08685 9673b52293c414ac0d677c5c0374873b 253 Pfam PF01925 Sulfite exporter TauE/SafE 12 245 1.0E-41 T 11-11-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 SHALO_RS12545 6c775e3904ab081afd5d2209184fb847 213 Pfam PF07290 Protein of unknown function (DUF1449) 8 204 1.1E-58 T 11-11-2016 IPR010840 Protein of unknown function DUF1449 SHALO_RS05575 fda4ad279dd4d3d88fc83e7a8569f4fc 100 Pfam PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter 20 66 6.5E-10 T 11-11-2016 IPR032820 Putative F0F1-ATPase subunit, Ca2+/Mg2+ transporter SHALO_RS12695 9152fea19c4ddd2b4f3d276b4e9b4e70 186 Pfam PF02659 Putative manganese efflux pump 32 177 2.0E-43 T 11-11-2016 IPR003810 Putative manganese efflux pump SHALO_RS12695 9152fea19c4ddd2b4f3d276b4e9b4e70 186 Hamap MF_01521 Probable manganese efflux pump MntP [mntP]. 1 180 21.714 T 11-11-2016 IPR022929 Putative manganese efflux pump MntP SHALO_RS02370 c78bf59d5b65b0803cbfbc1efff2e0b8 247 Pfam PF03883 Protein of unknown function (DUF328) 1 230 4.2E-40 T 11-11-2016 IPR005583 Peroxide stress protein YaaA SHALO_RS01295 9f207448514c80781b714ac910119aae 352 Pfam PF03739 Predicted permease YjgP/YjgQ family 6 348 1.4E-35 T 11-11-2016 IPR005495 Permease LptG/LptF-related GO:0016021 SHALO_RS13470 7b41ca5e55ccec90c605069978cd1634 69 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 5 24 0.0016 T 11-11-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal SHALO_RS13665 943efb567e0a85e6a28e00c88b6ebf34 214 Pfam PF13723 Beta-ketoacyl synthase, N-terminal domain 30 183 6.1E-20 T 11-11-2016 IPR014030 Beta-ketoacyl synthase, N-terminal SHALO_RS10660 4ac742541ac4299d142561078da3c2ad 303 Pfam PF03547 Membrane transport protein 156 297 3.1E-14 T 11-11-2016 IPR004776 Membrane transport protein GO:0016021|GO:0055085 SHALO_RS04645 95fb35acc1d86f90b094480c248f23ba 223 Pfam PF09335 SNARE associated Golgi protein 73 190 3.7E-27 T 11-11-2016 IPR032816 SNARE associated Golgi protein SHALO_RS06965 c2703424a55bfadd53e4718c99bcfcb3 243 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 10 92 5.2E-33 T 11-11-2016 IPR010627 Peptidase A24A, N-terminal SHALO_RS06965 c2703424a55bfadd53e4718c99bcfcb3 243 Pfam PF01478 Type IV leader peptidase family 105 204 2.5E-11 T 11-11-2016 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 SHALO_RS14725 02cb090542e085f343ce6d8a85927656 235 Pfam PF11741 AMIN domain 150 234 4.8E-10 T 11-11-2016 IPR021731 AMIN domain SHALO_RS10390 736ee444a3c2122370a2b032951f0250 386 Pfam PF01098 Cell cycle protein 7 385 1.7E-82 T 11-11-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 SHALO_RS10695 af99caeffa4002addcd293d4da3efeda 152 Pfam PF13613 Helix-turn-helix of DDE superfamily endonuclease 51 99 1.0E-12 T 11-11-2016 IPR027805 Transposase, Helix-turn-helix domain SHALO_RS03685 01ff06ac37880f385607cb311c9c3993 70 Pfam PF14899 Domain of unknown function (DUF4492) 7 66 9.5E-23 T 11-11-2016 IPR027853 Protein of unknown function DUF4492 SHALO_RS13220 0842336a8265a25d7d34fe99e555a545 122 Pfam PF02472 Biopolymer transport protein ExbD/TolR 6 121 4.5E-19 T 11-11-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 SHALO_RS03865 62adb25f618320ec1513f783a8292a9e 151 Pfam PF06271 RDD family 19 144 7.9E-22 T 11-11-2016 IPR010432 RDD SHALO_RS14765 988616b2effb077d18284153cc50e990 248 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 137 246 8.6E-12 T 11-11-2016 IPR003709 Peptidase M15B GO:0006508|GO:0008233