locus-tag class description STH_RS00005 PF00308 Bacterial dnaA protein STH_RS00005 PF11638 DnaA N-terminal domain STH_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix STH_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain STH_RS00010 PF02767 DNA polymerase III beta subunit, central domain STH_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain STH_RS00020 PF02463 RecF/RecN/SMC N terminal domain STH_RS00030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase STH_RS00030 PF01751 Toprim domain STH_RS00030 PF00986 DNA gyrase B subunit, carboxyl terminus STH_RS00030 PF00204 DNA gyrase B STH_RS00035 PF00521 DNA gyrase/topoisomerase IV, subunit A STH_RS00035 PF03989 DNA gyrase C-terminal domain, beta-propeller STH_RS00040 PF00266 Aminotransferase class-V STH_RS00045 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain STH_RS00045 PF01842 ACT domain STH_RS00045 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain STH_RS00050 PF02403 Seryl-tRNA synthetase N-terminal domain STH_RS00050 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) STH_RS00060 PF14437 MafB19-like deaminase STH_RS00065 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle STH_RS00070 PF12169 DNA polymerase III subunits gamma and tau domain III STH_RS00075 PF02575 YbaB/EbfC DNA-binding family STH_RS00080 PF13662 Toprim domain STH_RS00080 PF02132 RecR protein STH_RS00080 PF00633 Helix-hairpin-helix motif STH_RS00085 PF00749 tRNA synthetases class I (E and Q), catalytic domain STH_RS00165 PF17284 Spermidine synthase tetramerisation domain STH_RS00170 PF00491 Arginase family STH_RS00175 PF03485 Arginyl tRNA synthetase N terminal domain STH_RS00175 PF05746 DALR anticodon binding domain STH_RS00175 PF00750 tRNA synthetases class I (R) STH_RS00180 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) STH_RS00185 PF00916 Sulfate permease family STH_RS00185 PF01740 STAS domain STH_RS00190 PF02560 Cyanate lyase C-terminal domain STH_RS00190 PF01381 Helix-turn-helix STH_RS00210 PF02566 OsmC-like protein STH_RS00215 PF04542 Sigma-70 region 2 STH_RS00215 PF08281 Sigma-70, region 4 STH_RS00225 PF01734 Patatin-like phospholipase STH_RS00235 PF07690 Major Facilitator Superfamily STH_RS00245 PF04055 Radical SAM superfamily STH_RS00245 PF12544 Lysine-2,3-aminomutase STH_RS00255 PF09043 D-Lysine 5,6-aminomutase TIM-barrel domain of alpha subunit STH_RS00260 PF02310 B12 binding domain STH_RS00260 PF16554 Dimerisation domain of d-ornithine 4,5-aminomutase STH_RS00270 PF06418 CTP synthase N-terminus STH_RS00270 PF00117 Glutamine amidotransferase class-I STH_RS00275 PF01966 HD domain STH_RS00285 PF00395 S-layer homology domain STH_RS00295 PF01695 IstB-like ATP binding protein STH_RS00320 PF00665 Integrase core domain STH_RS00320 PF09299 Mu transposase, C-terminal STH_RS00325 PF01471 Putative peptidoglycan binding domain STH_RS00325 PF13401 AAA domain STH_RS00345 PF01471 Putative peptidoglycan binding domain STH_RS00345 PF03572 Peptidase family S41 STH_RS00345 PF17820 PDZ domain STH_RS00355 PF00082 Subtilase family STH_RS00360 PF03061 Thioesterase superfamily STH_RS00365 PF05853 beta-keto acid cleavage enzyme STH_RS00375 PF00923 Transaldolase/Fructose-6-phosphate aldolase STH_RS00380 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded STH_RS00390 PF01804 Penicillin amidase STH_RS00395 PF01804 Penicillin amidase STH_RS00400 PF01197 Ribosomal protein L31 STH_RS00405 PF07136 Protein of unknown function (DUF1385) STH_RS00410 PF03462 PCRF domain STH_RS00410 PF00472 RF-1 domain STH_RS00415 PF17827 PrmC N-terminal domain STH_RS00415 PF05175 Methyltransferase small domain STH_RS00420 PF01300 Telomere recombination STH_RS00420 PF03481 Putative GTP-binding controlling metal-binding STH_RS00425 PF01451 Low molecular weight phosphotyrosine protein phosphatase STH_RS00430 PF02502 Ribose/Galactose Isomerase STH_RS00435 PF04260 Protein of unknown function (DUF436) STH_RS00445 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region STH_RS00450 PF00953 Glycosyl transferase family 4 STH_RS00455 PF02350 UDP-N-acetylglucosamine 2-epimerase STH_RS00470 PF00119 ATP synthase A chain STH_RS00475 PF00137 ATP synthase subunit C STH_RS00480 PF00430 ATP synthase B/B' CF(0) STH_RS00485 PF00213 ATP synthase delta (OSCP) subunit STH_RS00490 PF02874 ATP synthase alpha/beta family, beta-barrel domain STH_RS00490 PF00306 ATP synthase alpha/beta chain, C terminal domain STH_RS00490 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain STH_RS00495 PF00231 ATP synthase STH_RS00500 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain STH_RS00500 PF02874 ATP synthase alpha/beta family, beta-barrel domain STH_RS00505 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain STH_RS00505 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain STH_RS00515 PF13183 4Fe-4S dicluster domain STH_RS00515 PF11870 Domain of unknown function (DUF3390) STH_RS00515 PF02589 LUD domain STH_RS00520 PF02754 Cysteine-rich domain STH_RS00525 PF02652 L-lactate permease STH_RS00530 PF00392 Bacterial regulatory proteins, gntR family STH_RS00530 PF07729 FCD domain STH_RS00550 PF08486 Stage II sporulation protein STH_RS00560 PF12116 Stage III sporulation protein D STH_RS00575 PF03466 LysR substrate binding domain STH_RS00575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family STH_RS00580 PF04143 Sulphur transport STH_RS00585 PF00581 Rhodanese-like domain STH_RS00590 PF04879 Molybdopterin oxidoreductase Fe4S4 domain STH_RS00590 PF01568 Molydopterin dinucleotide binding domain STH_RS00590 PF00384 Molybdopterin oxidoreductase STH_RS00600 PF13247 4Fe-4S dicluster domain STH_RS00610 PF00163 Ribosomal protein S4/S9 N-terminal domain STH_RS00610 PF01479 S4 domain STH_RS00615 PF04055 Radical SAM superfamily STH_RS00620 PF01228 Glycine radical STH_RS00620 PF02901 Pyruvate formate lyase-like STH_RS00625 PF07977 FabA-like domain STH_RS00630 PF02773 S-adenosylmethionine synthetase, C-terminal domain STH_RS00630 PF00438 S-adenosylmethionine synthetase, N-terminal domain STH_RS00630 PF02772 S-adenosylmethionine synthetase, central domain STH_RS00645 PF02599 Global regulator protein family STH_RS00650 PF02623 FliW protein STH_RS00655 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein STH_RS00655 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus STH_RS00665 PF01043 SecA preprotein cross-linking domain STH_RS00665 PF07516 SecA Wing and Scaffold domain STH_RS00665 PF07517 SecA DEAD-like domain STH_RS00665 PF02810 SEC-C motif STH_RS00670 PF01434 Peptidase family M41 STH_RS00670 PF17862 AAA+ lid domain STH_RS00670 PF00004 ATPase family associated with various cellular activities (AAA) STH_RS00670 PF06480 FtsH Extracellular STH_RS00675 PF00939 Sodium:sulfate symporter transmembrane region STH_RS00680 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle STH_RS00685 PF00528 Binding-protein-dependent transport system inner membrane component STH_RS00690 PF12911 N-terminal TM domain of oligopeptide transport permease C STH_RS00690 PF00528 Binding-protein-dependent transport system inner membrane component STH_RS00700 PF00266 Aminotransferase class-V STH_RS00705 PF02080 TrkA-C domain STH_RS00710 PF00999 Sodium/hydrogen exchanger family STH_RS00720 PF03462 PCRF domain STH_RS00720 PF00472 RF-1 domain STH_RS00730 PF03808 Glycosyl transferase WecB/TagA/CpsF family STH_RS00735 PF00005 ABC transporter STH_RS00740 PF02687 FtsX-like permease family STH_RS00740 PF18075 FtsX extracellular domain STH_RS00750 PF17820 PDZ domain STH_RS00750 PF03572 Peptidase family S41 STH_RS00750 PF01471 Putative peptidoglycan binding domain STH_RS00760 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle STH_RS00765 PF00528 Binding-protein-dependent transport system inner membrane component STH_RS00770 PF12911 N-terminal TM domain of oligopeptide transport permease C STH_RS00770 PF00528 Binding-protein-dependent transport system inner membrane component STH_RS00775 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle STH_RS00780 PF00528 Binding-protein-dependent transport system inner membrane component STH_RS00785 PF00528 Binding-protein-dependent transport system inner membrane component STH_RS00785 PF12911 N-terminal TM domain of oligopeptide transport permease C STH_RS00790 PF01884 PcrB family STH_RS00795 PF12344 Ultra-violet resistance protein B STH_RS00795 PF00271 Helicase conserved C-terminal domain STH_RS00795 PF04851 Type III restriction enzyme, res subunit STH_RS00795 PF02151 UvrB/uvrC motif STH_RS00795 PF17757 UvrB interaction domain STH_RS00815 PF00583 Acetyltransferase (GNAT) family STH_RS00820 PF08543 Phosphomethylpyrimidine kinase STH_RS00835 PF00501 AMP-binding enzyme STH_RS00835 PF13193 AMP-binding enzyme C-terminal domain STH_RS00840 PF00762 Ferrochelatase STH_RS00845 PF01323 DSBA-like thioredoxin domain STH_RS00850 PF13026 Protein of unknown function (DUF3887) STH_RS00850 PF12146 Serine aminopeptidase, S33 STH_RS00865 PF01638 HxlR-like helix-turn-helix STH_RS00875 PF17755 UvrA DNA-binding domain STH_RS00875 PF17760 UvrA interaction domain STH_RS00885 PF04542 Sigma-70 region 2 STH_RS00885 PF08281 Sigma-70, region 4 STH_RS00895 PF02151 UvrB/uvrC motif STH_RS00895 PF01541 GIY-YIG catalytic domain STH_RS00895 PF08459 UvrC Helix-hairpin-helix N-terminal STH_RS00925 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV STH_RS00935 PF00293 NUDIX domain STH_RS00945 PF08281 Sigma-70, region 4 STH_RS00945 PF04542 Sigma-70 region 2 STH_RS00970 PF03668 P-loop ATPase protein family STH_RS00975 PF01933 Uncharacterised protein family UPF0052 STH_RS00980 PF00596 Class II Aldolase and Adducin N-terminal domain STH_RS00985 PF10298 WhiA N-terminal LAGLIDADG-like domain STH_RS00985 PF02650 WhiA C-terminal HTH domain STH_RS00985 PF14527 WhiA LAGLIDADG-like domain STH_RS00990 PF00348 Polyprenyl synthetase STH_RS00995 PF06971 Putative DNA-binding protein N-terminus STH_RS00995 PF02629 CoA binding domain STH_RS01000 PF02457 DisA bacterial checkpoint controller nucleotide-binding STH_RS01010 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III STH_RS01010 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II STH_RS01010 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I STH_RS01010 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain STH_RS01020 PF01380 SIS domain STH_RS01025 PF00120 Glutamine synthetase, catalytic domain STH_RS01025 PF03951 Glutamine synthetase, beta-Grasp domain STH_RS01030 PF03741 Integral membrane protein TerC family STH_RS01045 PF03862 SpoVAC/SpoVAEB sporulation membrane protein STH_RS01050 PF07451 Stage V sporulation protein AD (SpoVAD) STH_RS01055 PF03862 SpoVAC/SpoVAEB sporulation membrane protein STH_RS01060 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain STH_RS01060 PF02777 Iron/manganese superoxide dismutases, C-terminal domain STH_RS01075 PF01921 tRNA synthetases class I (K) STH_RS01095 PF00378 Enoyl-CoA hydratase/isomerase STH_RS01100 PF00378 Enoyl-CoA hydratase/isomerase STH_RS01105 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain STH_RS01105 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain STH_RS01105 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain STH_RS01115 PF11146 Protein of unknown function (DUF2905) STH_RS01125 PF00005 ABC transporter STH_RS01130 PF13180 PDZ domain STH_RS01130 PF17820 PDZ domain STH_RS01160 PF00072 Response regulator receiver domain STH_RS01160 PF08769 Sporulation initiation factor Spo0A C terminal STH_RS01165 PF00860 Permease family STH_RS01180 PF00909 Ammonium Transporter Family STH_RS01185 PF01645 Conserved region in glutamate synthase STH_RS01185 PF04898 Glutamate synthase central domain STH_RS01185 PF00310 Glutamine amidotransferases class-II STH_RS01185 PF01493 GXGXG motif STH_RS01190 PF00733 Asparagine synthase STH_RS01190 PF13537 Glutamine amidotransferase domain STH_RS01205 PF01678 Diaminopimelate epimerase STH_RS01215 PF00528 Binding-protein-dependent transport system inner membrane component STH_RS01220 PF00528 Binding-protein-dependent transport system inner membrane component STH_RS01225 PF00005 ABC transporter STH_RS01230 PF04552 Sigma-54, DNA binding domain STH_RS01230 PF04963 Sigma-54 factor, core binding domain STH_RS01230 PF00309 Sigma-54 factor, Activator interacting domain (AID) STH_RS01240 PF03466 LysR substrate binding domain STH_RS01240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family STH_RS01245 PF00162 Phosphoglycerate kinase STH_RS01255 PF00121 Triosephosphate isomerase STH_RS01260 PF02583 Metal-sensitive transcriptional repressor STH_RS01270 PF00085 Thioredoxin STH_RS01275 PF01676 Metalloenzyme superfamily STH_RS01275 PF06415 BPG-independent PGAM N-terminus (iPGM_N) STH_RS01280 PF00113 Enolase, C-terminal TIM barrel domain STH_RS01280 PF03952 Enolase, N-terminal domain STH_RS01285 PF03840 Preprotein translocase SecG subunit STH_RS01290 PF00561 alpha/beta hydrolase fold STH_RS01300 PF09383 NIL domain STH_RS01300 PF00005 ABC transporter STH_RS01305 PF00528 Binding-protein-dependent transport system inner membrane component STH_RS01310 PF03180 NLPA lipoprotein STH_RS01315 PF02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain STH_RS01315 PF02558 Ketopantoate reductase PanE/ApbA STH_RS01325 PF13537 Glutamine amidotransferase domain STH_RS01325 PF00733 Asparagine synthase STH_RS01435 PF07670 Nucleoside recognition STH_RS01470 PF01610 Transposase STH_RS01470 PF13683 Integrase core domain STH_RS01480 PF00665 Integrase core domain STH_RS01485 PF01695 IstB-like ATP binding protein STH_RS01490 PF01695 IstB-like ATP binding protein STH_RS01495 PF00665 Integrase core domain STH_RS01500 PF00872 Transposase, Mutator family STH_RS01550 PF14870 Photosynthesis system II assembly factor YCF48 STH_RS01555 PF01869 BadF/BadG/BcrA/BcrD ATPase family STH_RS01575 PF08352 Oligopeptide/dipeptide transporter, C-terminal region STH_RS01575 PF00005 ABC transporter STH_RS01580 PF08352 Oligopeptide/dipeptide transporter, C-terminal region STH_RS01580 PF00005 ABC transporter STH_RS01590 PF00528 Binding-protein-dependent transport system inner membrane component STH_RS01595 PF01915 Glycosyl hydrolase family 3 C-terminal domain STH_RS01595 PF00933 Glycosyl hydrolase family 3 N terminal domain STH_RS01600 PF02585 GlcNAc-PI de-N-acetylase STH_RS01605 PF00144 Beta-lactamase STH_RS01610 PF07075 Protein of unknown function (DUF1343) STH_RS01620 PF02371 Transposase IS116/IS110/IS902 family STH_RS01620 PF01548 Transposase STH_RS01630 PF00872 Transposase, Mutator family STH_RS01640 PF09704 CRISPR-associated protein (Cas_Cas5) STH_RS01665 PF07676 WD40-like Beta Propeller Repeat STH_RS01665 PF00326 Prolyl oligopeptidase family STH_RS01675 PF00268 Ribonucleotide reductase, small chain STH_RS01680 PF02867 Ribonucleotide reductase, barrel domain STH_RS01680 PF00317 Ribonucleotide reductase, all-alpha domain STH_RS01680 PF03477 ATP cone domain STH_RS01715 PF01520 N-acetylmuramoyl-L-alanine amidase STH_RS01715 PF05036 Sporulation related domain STH_RS01730 PF09571 XcyI restriction endonuclease STH_RS01750 PF00719 Inorganic pyrophosphatase STH_RS01755 PF00773 RNB domain STH_RS01755 PF08206 Ribonuclease B OB domain STH_RS01755 PF17876 Cold shock domain STH_RS01755 PF00575 S1 RNA binding domain STH_RS01760 PF01668 SmpB protein STH_RS01765 PF01047 MarR family STH_RS01770 PF01177 Asp/Glu/Hydantoin racemase STH_RS01775 PF01138 3' exoribonuclease family, domain 1 STH_RS01775 PF03725 3' exoribonuclease family, domain 2 STH_RS01780 PF01725 Ham1 family STH_RS01785 PF12850 Calcineurin-like phosphoesterase superfamily domain STH_RS01820 PF04070 Domain of unknown function (DUF378) STH_RS01835 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 STH_RS01835 PF00367 phosphotransferase system, EIIB STH_RS01835 PF02378 Phosphotransferase system, EIIC STH_RS01840 PF00367 phosphotransferase system, EIIB STH_RS01845 PF02378 Phosphotransferase system, EIIC STH_RS01845 PF00367 phosphotransferase system, EIIB STH_RS01845 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 STH_RS01850 PF03123 CAT RNA binding domain STH_RS01850 PF00874 PRD domain STH_RS01855 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal STH_RS01855 PF01926 50S ribosome-binding GTPase STH_RS01860 PF04055 Radical SAM superfamily STH_RS01860 PF06968 Biotin and Thiamin Synthesis associated domain STH_RS01865 PF04055 Radical SAM superfamily STH_RS01865 PF06968 Biotin and Thiamin Synthesis associated domain STH_RS01875 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain STH_RS01875 PF07992 Pyridine nucleotide-disulphide oxidoreductase STH_RS01880 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase STH_RS01880 PF05698 Bacterial trigger factor protein (TF) C-terminus STH_RS01880 PF05697 Bacterial trigger factor protein (TF) STH_RS01885 PF00574 Clp protease STH_RS01890 PF06689 ClpX C4-type zinc finger STH_RS01890 PF07724 AAA domain (Cdc48 subfamily) STH_RS01890 PF10431 C-terminal, D2-small domain, of ClpB protein STH_RS01895 PF05362 Lon protease (S16) C-terminal proteolytic domain STH_RS01895 PF00004 ATPase family associated with various cellular activities (AAA) STH_RS01900 PF02190 ATP-dependent protease La (LON) substrate-binding domain STH_RS01900 PF05362 Lon protease (S16) C-terminal proteolytic domain STH_RS01900 PF00004 ATPase family associated with various cellular activities (AAA) STH_RS01905 PF01926 50S ribosome-binding GTPase STH_RS01910 PF13426 PAS domain STH_RS01910 PF08447 PAS fold STH_RS01910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain STH_RS01925 PF00133 tRNA synthetases class I (I, L, M and V) STH_RS01925 PF08264 Anticodon-binding domain of tRNA STH_RS01925 PF10458 Valyl tRNA synthetase tRNA binding arm STH_RS01930 PF02875 Mur ligase family, glutamate ligase domain STH_RS01930 PF08245 Mur ligase middle domain STH_RS01945 PF02545 Maf-like protein STH_RS01950 PF04002 RadC-like JAB domain STH_RS01970 PF03775 Septum formation inhibitor MinC, C-terminal domain STH_RS01975 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain STH_RS01980 PF03776 Septum formation topological specificity factor MinE STH_RS01990 PF02682 Carboxyltransferase domain, subdomain C and D STH_RS02000 PF10502 Signal peptidase, peptidase S26 STH_RS02005 PF17912 MalK OB fold domain STH_RS02005 PF00005 ABC transporter STH_RS02010 PF00528 Binding-protein-dependent transport system inner membrane component STH_RS02015 PF12849 PBP superfamily domain STH_RS02030 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain STH_RS02040 PF10609 NUBPL iron-transfer P-loop NTPase STH_RS02040 PF01883 Iron-sulfur cluster assembly protein STH_RS02045 PF00437 Type II/IV secretion system protein STH_RS02085 PF00437 Type II/IV secretion system protein STH_RS02115 PF05368 NmrA-like family STH_RS02135 PF03358 NADPH-dependent FMN reductase STH_RS02140 PF01790 Prolipoprotein diacylglyceryl transferase STH_RS02150 PF00676 Dehydrogenase E1 component STH_RS02155 PF02780 Transketolase, C-terminal domain STH_RS02155 PF02779 Transketolase, pyrimidine binding domain STH_RS02160 PF02817 e3 binding domain STH_RS02160 PF00364 Biotin-requiring enzyme STH_RS02160 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) STH_RS02165 PF07992 Pyridine nucleotide-disulphide oxidoreductase STH_RS02165 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain STH_RS02170 PF00072 Response regulator receiver domain STH_RS02170 PF00486 Transcriptional regulatory protein, C terminal STH_RS02175 PF00672 HAMP domain STH_RS02175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase STH_RS02175 PF00512 His Kinase A (phospho-acceptor) domain STH_RS02180 PF13180 PDZ domain STH_RS02180 PF17820 PDZ domain STH_RS02195 PF00269 Small, acid-soluble spore proteins, alpha/beta type STH_RS02205 PF02675 S-adenosylmethionine decarboxylase STH_RS02215 PF04055 Radical SAM superfamily STH_RS02215 PF02310 B12 binding domain STH_RS02230 PF00575 S1 RNA binding domain STH_RS02230 PF10150 Ribonuclease E/G family STH_RS02235 PF16901 C-terminal domain of alpha-glycerophosphate oxidase STH_RS02235 PF01266 FAD dependent oxidoreductase STH_RS02245 PF00829 Ribosomal prokaryotic L21 protein STH_RS02250 PF04327 Cysteine protease Prp STH_RS02255 PF01016 Ribosomal L27 protein STH_RS02260 PF01018 GTP1/OBG STH_RS02260 PF09269 Domain of unknown function (DUF1967) STH_RS02260 PF01926 50S ribosome-binding GTPase STH_RS02270 PF01467 Cytidylyltransferase-like STH_RS02275 PF01966 HD domain STH_RS02285 PF00912 Transglycosylase STH_RS02285 PF00905 Penicillin binding protein transpeptidase domain STH_RS02290 PF02954 Bacterial regulatory protein, Fis family STH_RS02290 PF00158 Sigma-54 interaction domain STH_RS02290 PF00989 PAS fold STH_RS02295 PF01212 Beta-eliminating lyase STH_RS02305 PF01212 Beta-eliminating lyase STH_RS02310 PF00209 Sodium:neurotransmitter symporter family STH_RS02315 PF00133 tRNA synthetases class I (I, L, M and V) STH_RS02315 PF09334 tRNA synthetases class I (M) STH_RS02315 PF13603 Leucyl-tRNA synthetase, Domain 2 STH_RS02315 PF08264 Anticodon-binding domain of tRNA STH_RS02335 PF00395 S-layer homology domain STH_RS02335 PF00963 Cohesin domain STH_RS02350 PF01557 Fumarylacetoacetate (FAA) hydrolase family STH_RS02355 PF00005 ABC transporter STH_RS02355 PF00664 ABC transporter transmembrane region STH_RS02360 PF00005 ABC transporter STH_RS02360 PF00664 ABC transporter transmembrane region STH_RS02390 PF01261 Xylose isomerase-like TIM barrel STH_RS02405 PF01882 Protein of unknown function DUF58 STH_RS02410 PF17863 AAA lid domain STH_RS02410 PF07726 ATPase family associated with various cellular activities (AAA) STH_RS02435 PF13416 Bacterial extracellular solute-binding protein STH_RS02440 PF00528 Binding-protein-dependent transport system inner membrane component STH_RS02445 PF00528 Binding-protein-dependent transport system inner membrane component STH_RS02450 PF00005 ABC transporter STH_RS02450 PF08402 TOBE domain STH_RS02460 PF00753 Metallo-beta-lactamase superfamily STH_RS02460 PF03772 Competence protein STH_RS02460 PF13567 Domain of unknown function (DUF4131) STH_RS02475 PF01649 Ribosomal protein S20 STH_RS02490 PF01476 LysM domain STH_RS02490 PF00704 Glycosyl hydrolases family 18 STH_RS02500 PF03449 Transcription elongation factor, N-terminal STH_RS02500 PF01272 Transcription elongation factor, GreA/GreB, C-term STH_RS02510 PF03144 Elongation factor Tu domain 2 STH_RS02510 PF00679 Elongation factor G C-terminus STH_RS02510 PF00009 Elongation factor Tu GTP binding domain STH_RS02510 PF06421 GTP-binding protein LepA C-terminus STH_RS02515 PF06969 HemN C-terminal domain STH_RS02515 PF04055 Radical SAM superfamily STH_RS02525 PF14698 Argininosuccinate lyase C-terminal STH_RS02525 PF00206 Lyase STH_RS02530 PF00082 Subtilase family STH_RS02535 PF00528 Binding-protein-dependent transport system inner membrane component STH_RS02540 PF00528 Binding-protein-dependent transport system inner membrane component STH_RS02545 PF00497 Bacterial extracellular solute-binding proteins, family 3 STH_RS02550 PF00005 ABC transporter STH_RS02555 PF00072 Response regulator receiver domain STH_RS02555 PF00196 Bacterial regulatory proteins, luxR family STH_RS02565 PF12804 MobA-like NTP transferase domain STH_RS02575 PF13344 Haloacid dehalogenase-like hydrolase STH_RS02575 PF00293 NUDIX domain STH_RS02585 PF06081 Aromatic acid exporter family member 1 STH_RS02595 PF00156 Phosphoribosyl transferase domain STH_RS02600 PF00117 Glutamine amidotransferase class-I STH_RS02600 PF00958 GMP synthase C terminal domain STH_RS02605 PF01628 HrcA protein C terminal domain STH_RS02610 PF01025 GrpE STH_RS02615 PF00012 Hsp70 protein STH_RS02620 PF00684 DnaJ central domain STH_RS02620 PF01556 DnaJ C terminal domain STH_RS02620 PF00226 DnaJ domain STH_RS02635 PF04452 RNA methyltransferase STH_RS02645 PF02585 GlcNAc-PI de-N-acetylase STH_RS02655 PF07478 D-ala D-ala ligase C-terminus STH_RS02655 PF01820 D-ala D-ala ligase N-terminus STH_RS02660 PF01230 HIT domain STH_RS02665 PF01165 Ribosomal protein S21 STH_RS02670 PF09424 Yqey-like protein STH_RS02680 PF00994 Probable molybdopterin binding domain STH_RS02680 PF02464 Competence-damaged protein STH_RS02685 PF04879 Molybdopterin oxidoreductase Fe4S4 domain STH_RS02685 PF00384 Molybdopterin oxidoreductase STH_RS02685 PF01568 Molydopterin dinucleotide binding domain STH_RS02690 PF01957 NfeD-like C-terminal, partner-binding STH_RS02690 PF01972 Serine dehydrogenase proteinase STH_RS02695 PF12127 SigmaW regulon antibacterial STH_RS02715 PF02645 Uncharacterised protein, DegV family COG1307 STH_RS02720 PF01336 OB-fold nucleic acid binding domain STH_RS02720 PF00152 tRNA synthetases class II (D, K and N) STH_RS02735 PF06898 Putative stage IV sporulation protein YqfD STH_RS02740 PF02562 PhoH-like protein STH_RS02745 PF07698 7TM receptor with intracellular HD hydrolase STH_RS02745 PF07697 7TM-HD extracellular STH_RS02745 PF01966 HD domain STH_RS02750 PF02130 Uncharacterized protein family UPF0054 STH_RS02755 PF01219 Prokaryotic diacylglycerol kinase STH_RS02760 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region STH_RS02765 PF01926 50S ribosome-binding GTPase STH_RS02765 PF07650 KH domain STH_RS02770 PF00465 Iron-containing alcohol dehydrogenase STH_RS02780 PF00704 Glycosyl hydrolases family 18 STH_RS02780 PF01476 LysM domain STH_RS02790 PF00571 CBS domain STH_RS02790 PF01769 Divalent cation transporter STH_RS02790 PF03448 MgtE intracellular N domain STH_RS02795 PF00724 NADH:flavin oxidoreductase / NADH oxidase family STH_RS02800 PF02537 CrcB-like protein, Camphor Resistance (CrcB) STH_RS02805 PF02537 CrcB-like protein, Camphor Resistance (CrcB) STH_RS02810 PF00528 Binding-protein-dependent transport system inner membrane component STH_RS02815 PF00210 Ferritin-like domain STH_RS02830 PF00005 ABC transporter STH_RS02840 PF00085 Thioredoxin STH_RS02845 PF00296 Luciferase-like monooxygenase STH_RS02855 PF01676 Metalloenzyme superfamily STH_RS02860 PF01168 Alanine racemase, N-terminal domain STH_RS02865 PF02126 Phosphotriesterase family STH_RS02880 PF14503 YhfZ C-terminal domain STH_RS02880 PF14502 Helix-turn-helix domain STH_RS02885 PF10797 Protein of unknown function STH_RS02890 PF00155 Aminotransferase class I and II STH_RS02895 PF10941 Protein of unknown function DUF2620 STH_RS02900 PF10437 Bacterial lipoate protein ligase C-terminus STH_RS02900 PF03099 Biotin/lipoate A/B protein ligase family STH_RS02905 PF01380 SIS domain STH_RS02910 PF07702 UTRA domain STH_RS02910 PF00392 Bacterial regulatory proteins, gntR family STH_RS02920 PF01791 DeoC/LacD family aldolase STH_RS02935 PF02565 Recombination protein O C terminal STH_RS02935 PF11967 Recombination protein O N terminal STH_RS02945 PF00528 Binding-protein-dependent transport system inner membrane component STH_RS02945 PF12911 N-terminal TM domain of oligopeptide transport permease C STH_RS02955 PF12911 N-terminal TM domain of oligopeptide transport permease C STH_RS02955 PF00528 Binding-protein-dependent transport system inner membrane component STH_RS02960 PF02156 Glycosyl hydrolase family 26 STH_RS02965 PF02091 Glycyl-tRNA synthetase alpha subunit STH_RS02970 PF02092 Glycyl-tRNA synthetase beta subunit STH_RS02970 PF05746 DALR anticodon binding domain STH_RS03010 PF00676 Dehydrogenase E1 component STH_RS03015 PF02817 e3 binding domain STH_RS03015 PF00364 Biotin-requiring enzyme STH_RS03015 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) STH_RS03020 PF03618 Kinase/pyrophosphorylase STH_RS03025 PF00391 PEP-utilising enzyme, mobile domain STH_RS03025 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain STH_RS03025 PF02896 PEP-utilising enzyme, TIM barrel domain STH_RS03030 PF08275 DNA primase catalytic core, N-terminal domain STH_RS03030 PF01807 CHC2 zinc finger STH_RS03030 PF10410 DnaB-helicase binding domain of primase STH_RS03035 PF00140 Sigma-70 factor, region 1.2 STH_RS03035 PF03979 Sigma-70 factor, region 1.1 STH_RS03035 PF04542 Sigma-70 region 2 STH_RS03035 PF04539 Sigma-70 region 3 STH_RS03035 PF04545 Sigma-70, region 4 STH_RS03040 PF01274 Malate synthase STH_RS03045 PF00463 Isocitrate lyase family STH_RS03080 PF01784 NIF3 (NGG1p interacting factor 3) STH_RS03085 PF08352 Oligopeptide/dipeptide transporter, C-terminal region STH_RS03085 PF00005 ABC transporter STH_RS03090 PF10518 TAT (twin-arginine translocation) pathway signal sequence STH_RS03090 PF00149 Calcineurin-like phosphoesterase STH_RS03100 PF00480 ROK family STH_RS03110 PF01380 SIS domain STH_RS03115 PF01979 Amidohydrolase family STH_RS03120 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase STH_RS03125 PF12704 MacB-like periplasmic core domain STH_RS03125 PF02687 FtsX-like permease family STH_RS03130 PF00005 ABC transporter STH_RS03145 PF13361 UvrD-like helicase C-terminal domain STH_RS03145 PF00580 UvrD/REP helicase N-terminal domain STH_RS03150 PF01923 Cobalamin adenosyltransferase STH_RS03170 PF00202 Aminotransferase class-III STH_RS03185 PF13193 AMP-binding enzyme C-terminal domain STH_RS03185 PF00501 AMP-binding enzyme STH_RS03205 PF02754 Cysteine-rich domain STH_RS03205 PF13183 4Fe-4S dicluster domain STH_RS03205 PF02665 Nitrate reductase gamma subunit STH_RS03225 PF03960 ArsC family STH_RS03235 PF04055 Radical SAM superfamily STH_RS03235 PF08756 YfkB-like domain STH_RS03240 PF00293 NUDIX domain STH_RS03240 PF13344 Haloacid dehalogenase-like hydrolase STH_RS03250 PF00005 ABC transporter STH_RS03250 PF00664 ABC transporter transmembrane region STH_RS03255 PF00664 ABC transporter transmembrane region STH_RS03255 PF00005 ABC transporter STH_RS03265 PF00144 Beta-lactamase STH_RS03270 PF07075 Protein of unknown function (DUF1343) STH_RS03285 PF00881 Nitroreductase family STH_RS03300 PF00266 Aminotransferase class-V STH_RS03305 PF01654 Cytochrome bd terminal oxidase subunit I STH_RS03310 PF02322 Cytochrome bd terminal oxidase subunit II STH_RS03315 PF00158 Sigma-54 interaction domain STH_RS03315 PF02954 Bacterial regulatory protein, Fis family STH_RS03315 PF13188 PAS domain STH_RS03320 PF01619 Proline dehydrogenase STH_RS03325 PF00171 Aldehyde dehydrogenase family STH_RS03335 PF00005 ABC transporter STH_RS03340 PF00196 Bacterial regulatory proteins, luxR family STH_RS03340 PF00072 Response regulator receiver domain STH_RS03350 PF01497 Periplasmic binding protein STH_RS03355 PF01032 FecCD transport family STH_RS03360 PF00005 ABC transporter STH_RS03380 PF12419 SNF2 Helicase protein STH_RS03380 PF00271 Helicase conserved C-terminal domain STH_RS03380 PF00176 SNF2 family N-terminal domain STH_RS03385 PF00248 Aldo/keto reductase family STH_RS03390 PF07733 Bacterial DNA polymerase III alpha NTPase domain STH_RS03390 PF17657 Bacterial DNA polymerase III alpha subunit finger domain STH_RS03390 PF14579 Helix-hairpin-helix motif STH_RS03390 PF02811 PHP domain STH_RS03390 PF01336 OB-fold nucleic acid binding domain STH_RS03395 PF05139 Erythromycin esterase STH_RS03395 PF00156 Phosphoribosyl transferase domain STH_RS03410 PF01867 CRISPR associated protein Cas1 STH_RS03415 PF18395 Cas3 C-terminal domain STH_RS03415 PF18019 HD domain STH_RS03430 PF09344 CT1975-like protein STH_RS03465 PF08447 PAS fold STH_RS03465 PF13426 PAS domain STH_RS03465 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain STH_RS03470 PF00005 ABC transporter STH_RS03470 PF02687 FtsX-like permease family STH_RS03470 PF12704 MacB-like periplasmic core domain STH_RS03485 PF02374 Anion-transporting ATPase STH_RS03490 PF17886 HSP20-like domain found in ArsA STH_RS03490 PF02374 Anion-transporting ATPase STH_RS03500 PF13722 5TM C-terminal transporter carbon starvation CstA STH_RS03500 PF02554 Carbon starvation protein CstA STH_RS03515 PF01661 Macro domain STH_RS03520 PF00528 Binding-protein-dependent transport system inner membrane component STH_RS03530 PF00005 ABC transporter STH_RS03535 PF00486 Transcriptional regulatory protein, C terminal STH_RS03535 PF00072 Response regulator receiver domain STH_RS03545 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain STH_RS03545 PF01565 FAD binding domain STH_RS03560 PF00005 ABC transporter STH_RS03570 PF12146 Serine aminopeptidase, S33 STH_RS03570 PF13026 Protein of unknown function (DUF3887) STH_RS03585 PF04608 Phosphatidylglycerophosphatase A STH_RS03590 PF00158 Sigma-54 interaction domain STH_RS03595 PF00501 AMP-binding enzyme STH_RS03595 PF14535 AMP-binding enzyme C-terminal domain STH_RS03600 PF12399 Branched-chain amino acid ATP-binding cassette transporter STH_RS03600 PF00005 ABC transporter STH_RS03605 PF00501 AMP-binding enzyme STH_RS03605 PF13193 AMP-binding enzyme C-terminal domain STH_RS03610 PF02653 Branched-chain amino acid transport system / permease component STH_RS03615 PF11862 Domain of unknown function (DUF3382) STH_RS03615 PF02653 Branched-chain amino acid transport system / permease component STH_RS03625 PF00005 ABC transporter STH_RS03630 PF14535 AMP-binding enzyme C-terminal domain STH_RS03630 PF00501 AMP-binding enzyme STH_RS03635 PF02613 Nitrate reductase delta subunit STH_RS03645 PF13247 4Fe-4S dicluster domain STH_RS03645 PF12800 4Fe-4S binding domain STH_RS03650 PF00384 Molybdopterin oxidoreductase STH_RS03650 PF04879 Molybdopterin oxidoreductase Fe4S4 domain STH_RS03650 PF01568 Molydopterin dinucleotide binding domain STH_RS03675 PF05922 Peptidase inhibitor I9 STH_RS03675 PF00082 Subtilase family STH_RS03680 PF04285 Protein of unknown function (DUF444) STH_RS03685 PF00108 Thiolase, N-terminal domain STH_RS03685 PF02803 Thiolase, C-terminal domain STH_RS03695 PF00171 Aldehyde dehydrogenase family STH_RS03700 PF12729 Four helix bundle sensory module for signal transduction STH_RS03700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain STH_RS03700 PF00672 HAMP domain STH_RS03705 PF04293 SpoVR like protein STH_RS03710 PF00108 Thiolase, N-terminal domain STH_RS03710 PF02803 Thiolase, C-terminal domain STH_RS03715 PF00893 Small Multidrug Resistance protein STH_RS03730 PF02335 Cytochrome c552 STH_RS03740 PF00486 Transcriptional regulatory protein, C terminal STH_RS03740 PF00072 Response regulator receiver domain STH_RS03745 PF00989 PAS fold STH_RS03745 PF00512 His Kinase A (phospho-acceptor) domain STH_RS03745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase STH_RS03755 PF00578 AhpC/TSA family STH_RS03760 PF05140 ResB-like family STH_RS03765 PF01578 Cytochrome C assembly protein STH_RS03770 PF08439 Oligopeptidase F STH_RS03770 PF01432 Peptidase family M3 STH_RS03790 PF07732 Multicopper oxidase STH_RS03800 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) STH_RS03805 PF01895 PhoU domain STH_RS03810 PF00005 ABC transporter STH_RS03815 PF00528 Binding-protein-dependent transport system inner membrane component STH_RS03820 PF00528 Binding-protein-dependent transport system inner membrane component STH_RS03825 PF16736 Single Cache-like STH_RS03825 PF00512 His Kinase A (phospho-acceptor) domain STH_RS03825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase STH_RS03825 PF00989 PAS fold STH_RS03830 PF00486 Transcriptional regulatory protein, C terminal STH_RS03830 PF00072 Response regulator receiver domain STH_RS03835 PF12849 PBP superfamily domain STH_RS03840 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase STH_RS03840 PF04101 Glycosyltransferase family 28 C-terminal domain STH_RS03850 PF08439 Oligopeptidase F STH_RS03850 PF01432 Peptidase family M3 STH_RS03930 PF13860 FlgD Ig-like domain STH_RS03930 PF00082 Subtilase family STH_RS03930 PF05922 Peptidase inhibitor I9 STH_RS03930 PF02225 PA domain STH_RS03940 PF01554 MatE STH_RS03950 PF00005 ABC transporter STH_RS03960 PF00005 ABC transporter STH_RS03965 PF00528 Binding-protein-dependent transport system inner membrane component STH_RS03970 PF00528 Binding-protein-dependent transport system inner membrane component STH_RS03975 PF12849 PBP superfamily domain STH_RS03995 PF00202 Aminotransferase class-III STH_RS04005 PF00356 Bacterial regulatory proteins, lacI family STH_RS04010 PF00294 pfkB family carbohydrate kinase STH_RS04015 PF05025 RbsD / FucU transport protein family STH_RS04020 PF00005 ABC transporter STH_RS04030 PF01321 Creatinase/Prolidase N-terminal domain STH_RS04030 PF00557 Metallopeptidase family M24 STH_RS04040 PF00483 Nucleotidyl transferase STH_RS04050 PF13439 Glycosyltransferase Family 4 STH_RS04050 PF00534 Glycosyl transferases group 1 STH_RS04055 PF13439 Glycosyltransferase Family 4 STH_RS04055 PF00534 Glycosyl transferases group 1 STH_RS04060 PF01370 NAD dependent epimerase/dehydratase family STH_RS04070 PF08757 CotH kinase protein STH_RS04080 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain STH_RS04080 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain STH_RS04080 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain STH_RS04085 PF13344 Haloacid dehalogenase-like hydrolase STH_RS04095 PF08298 PrkA AAA domain STH_RS04095 PF06798 PrkA serine protein kinase C-terminal domain STH_RS04115 PF08220 DeoR-like helix-turn-helix domain STH_RS04115 PF00455 DeoR C terminal sensor domain STH_RS04120 PF00294 pfkB family carbohydrate kinase STH_RS04125 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit STH_RS04125 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 STH_RS04130 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit STH_RS04130 PF02378 Phosphotransferase system, EIIC STH_RS04140 PF00501 AMP-binding enzyme STH_RS04140 PF13193 AMP-binding enzyme C-terminal domain STH_RS04145 PF00005 ABC transporter STH_RS04150 PF12399 Branched-chain amino acid ATP-binding cassette transporter STH_RS04150 PF00005 ABC transporter STH_RS04155 PF02653 Branched-chain amino acid transport system / permease component STH_RS04155 PF11862 Domain of unknown function (DUF3382) STH_RS04160 PF02653 Branched-chain amino acid transport system / permease component STH_RS04170 PF02803 Thiolase, C-terminal domain STH_RS04170 PF00108 Thiolase, N-terminal domain STH_RS04180 PF00561 alpha/beta hydrolase fold STH_RS04185 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal STH_RS04185 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III STH_RS04190 PF12697 Alpha/beta hydrolase family STH_RS04205 PF01048 Phosphorylase superfamily STH_RS04210 PF01048 Phosphorylase superfamily STH_RS04215 PF01008 Initiation factor 2 subunit family STH_RS04220 PF04055 Radical SAM superfamily STH_RS04225 PF04055 Radical SAM superfamily STH_RS04230 PF02621 Menaquinone biosynthesis STH_RS04240 PF13458 Periplasmic binding protein STH_RS04245 PF02653 Branched-chain amino acid transport system / permease component STH_RS04250 PF02653 Branched-chain amino acid transport system / permease component STH_RS04250 PF11862 Domain of unknown function (DUF3382) STH_RS04255 PF12399 Branched-chain amino acid ATP-binding cassette transporter STH_RS04255 PF00005 ABC transporter STH_RS04260 PF00005 ABC transporter STH_RS04265 PF02743 Cache domain STH_RS04265 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain STH_RS04265 PF00672 HAMP domain STH_RS04275 PF01321 Creatinase/Prolidase N-terminal domain STH_RS04275 PF00557 Metallopeptidase family M24 STH_RS04285 PF04307 LexA-binding, inner membrane-associated putative hydrolase STH_RS04295 PF13191 AAA ATPase domain STH_RS04295 PF00069 Protein kinase domain STH_RS04300 PF01053 Cys/Met metabolism PLP-dependent enzyme STH_RS04305 PF00206 Lyase STH_RS04305 PF10415 Fumarase C C-terminus STH_RS04310 PF17126 RsmF rRNA methyltransferase first C-terminal domain STH_RS04310 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF STH_RS04310 PF01189 16S rRNA methyltransferase RsmB/F STH_RS04320 PF01048 Phosphorylase superfamily STH_RS04325 PF00365 Phosphofructokinase STH_RS04330 PF02887 Pyruvate kinase, alpha/beta domain STH_RS04330 PF00391 PEP-utilising enzyme, mobile domain STH_RS04330 PF00224 Pyruvate kinase, barrel domain STH_RS04335 PF03061 Thioesterase superfamily STH_RS04340 PF01883 Iron-sulfur cluster assembly protein STH_RS04340 PF10609 NUBPL iron-transfer P-loop NTPase STH_RS04345 PF01987 Mitochondrial biogenesis AIM24 STH_RS04355 PF00512 His Kinase A (phospho-acceptor) domain STH_RS04355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase STH_RS04355 PF16736 Single Cache-like STH_RS04355 PF00989 PAS fold STH_RS04360 PF00486 Transcriptional regulatory protein, C terminal STH_RS04360 PF00072 Response regulator receiver domain STH_RS04370 PF04542 Sigma-70 region 2 STH_RS04370 PF08281 Sigma-70, region 4 STH_RS04380 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) STH_RS04385 PF00476 DNA polymerase family A STH_RS04385 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain STH_RS04385 PF01367 5'-3' exonuclease, C-terminal SAM fold STH_RS04390 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain STH_RS04390 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain STH_RS04390 PF06827 Zinc finger found in FPG and IleRS STH_RS04400 PF01121 Dephospho-CoA kinase STH_RS04425 PF00005 ABC transporter STH_RS04445 PF03190 Protein of unknown function, DUF255 STH_RS04450 PF07486 Cell Wall Hydrolase STH_RS04455 PF09671 Spore coat protein (Spore_GerQ) STH_RS04465 PF00258 Flavodoxin STH_RS04465 PF01613 Flavin reductase like domain STH_RS04470 PF07690 Major Facilitator Superfamily STH_RS04490 PF01554 MatE STH_RS04500 PF00005 ABC transporter STH_RS04505 PF00528 Binding-protein-dependent transport system inner membrane component STH_RS04530 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) STH_RS04535 PF16177 Acetyl-coenzyme A synthetase N-terminus STH_RS04535 PF00501 AMP-binding enzyme STH_RS04535 PF13193 AMP-binding enzyme C-terminal domain STH_RS04545 PF09587 Bacterial capsule synthesis protein PGA_cap STH_RS04555 PF13847 Methyltransferase domain STH_RS04560 PF00271 Helicase conserved C-terminal domain STH_RS04560 PF08494 DEAD/H associated STH_RS04560 PF00270 DEAD/DEAH box helicase STH_RS04570 PF00005 ABC transporter STH_RS04580 PF07690 Major Facilitator Superfamily STH_RS04585 PF16197 Ketoacyl-synthetase C-terminal extension STH_RS04585 PF02801 Beta-ketoacyl synthase, C-terminal domain STH_RS04585 PF00109 Beta-ketoacyl synthase, N-terminal domain STH_RS04585 PF00550 Phosphopantetheine attachment site STH_RS04585 PF00698 Acyl transferase domain STH_RS04585 PF08659 KR domain STH_RS04595 PF02040 Arsenical pump membrane protein STH_RS04600 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) STH_RS04610 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit STH_RS04610 PF13237 4Fe-4S dicluster domain STH_RS04610 PF10531 SLBB domain STH_RS04610 PF13375 RnfC Barrel sandwich hybrid domain STH_RS04615 PF03116 NQR2, RnfD, RnfE family STH_RS04620 PF04205 FMN-binding domain STH_RS04625 PF02508 Rnf-Nqr subunit, membrane protein STH_RS04630 PF02508 Rnf-Nqr subunit, membrane protein STH_RS04635 PF04060 Putative Fe-S cluster STH_RS04635 PF13187 4Fe-4S dicluster domain STH_RS04635 PF00037 4Fe-4S binding domain STH_RS04655 PF00326 Prolyl oligopeptidase family STH_RS04655 PF07676 WD40-like Beta Propeller Repeat STH_RS04660 PF08281 Sigma-70, region 4 STH_RS04660 PF04542 Sigma-70 region 2 STH_RS04670 PF02401 LytB protein STH_RS04685 PF05193 Peptidase M16 inactive domain STH_RS04685 PF00675 Insulinase (Peptidase family M16) STH_RS04690 PF00574 Clp protease STH_RS04700 PF12838 4Fe-4S dicluster domain STH_RS04700 PF12800 4Fe-4S binding domain STH_RS04705 PF00384 Molybdopterin oxidoreductase STH_RS04705 PF01568 Molydopterin dinucleotide binding domain STH_RS04705 PF04879 Molybdopterin oxidoreductase Fe4S4 domain STH_RS04720 PF05384 Sensor protein DegS STH_RS04720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase STH_RS04720 PF07730 Histidine kinase STH_RS04725 PF00196 Bacterial regulatory proteins, luxR family STH_RS04725 PF00072 Response regulator receiver domain STH_RS04735 PF00196 Bacterial regulatory proteins, luxR family STH_RS04735 PF00072 Response regulator receiver domain STH_RS04740 PF00582 Universal stress protein family STH_RS04750 PF00578 AhpC/TSA family STH_RS04755 PF00578 AhpC/TSA family STH_RS04770 PF01645 Conserved region in glutamate synthase STH_RS04780 PF01361 Tautomerase enzyme STH_RS04790 PF00037 4Fe-4S binding domain STH_RS04800 PF05163 DinB family STH_RS04810 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase STH_RS04810 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase STH_RS04820 PF03167 Uracil DNA glycosylase superfamily STH_RS04835 PF00202 Aminotransferase class-III STH_RS04860 PF00672 HAMP domain STH_RS04860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain STH_RS04865 PF17746 SfsA N-terminal OB domain STH_RS04865 PF03749 Sugar fermentation stimulation protein RE domain STH_RS04875 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit STH_RS04880 PF02378 Phosphotransferase system, EIIC STH_RS04890 PF00232 Glycosyl hydrolase family 1 STH_RS04895 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 STH_RS04895 PF00381 PTS HPr component phosphorylation site STH_RS04895 PF00391 PEP-utilising enzyme, mobile domain STH_RS04895 PF02896 PEP-utilising enzyme, TIM barrel domain STH_RS04895 PF05524 PEP-utilising enzyme, N-terminal STH_RS04900 PF07676 WD40-like Beta Propeller Repeat STH_RS04900 PF00326 Prolyl oligopeptidase family STH_RS04910 PF01595 Cyclin M transmembrane N-terminal domain STH_RS04910 PF00571 CBS domain STH_RS04910 PF03471 Transporter associated domain STH_RS04915 PF01435 Peptidase family M48 STH_RS04920 PF00109 Beta-ketoacyl synthase, N-terminal domain STH_RS04920 PF02801 Beta-ketoacyl synthase, C-terminal domain STH_RS04925 PF00440 Bacterial regulatory proteins, tetR family STH_RS04935 PF07992 Pyridine nucleotide-disulphide oxidoreductase STH_RS04945 PF07992 Pyridine nucleotide-disulphide oxidoreductase STH_RS04965 PF00963 Cohesin domain STH_RS04965 PF00395 S-layer homology domain STH_RS04975 PF03061 Thioesterase superfamily STH_RS05000 PF00005 ABC transporter STH_RS05005 PF02687 FtsX-like permease family STH_RS05005 PF12704 MacB-like periplasmic core domain STH_RS05030 PF01925 Sulfite exporter TauE/SafE STH_RS05035 PF01521 Iron-sulphur cluster biosynthesis STH_RS05040 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) STH_RS05045 PF00753 Metallo-beta-lactamase superfamily STH_RS05050 PF07694 5TMR of 5TMR-LYT STH_RS05050 PF06580 Histidine kinase STH_RS05050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase STH_RS05055 PF00072 Response regulator receiver domain STH_RS05055 PF04397 LytTr DNA-binding domain STH_RS05070 PF01227 GTP cyclohydrolase I STH_RS05080 PF13183 4Fe-4S dicluster domain STH_RS05080 PF02754 Cysteine-rich domain STH_RS05085 PF01565 FAD binding domain STH_RS05085 PF02913 FAD linked oxidases, C-terminal domain STH_RS05105 PF00528 Binding-protein-dependent transport system inner membrane component STH_RS05120 PF01053 Cys/Met metabolism PLP-dependent enzyme STH_RS05125 PF01545 Cation efflux family STH_RS05125 PF16916 Dimerisation domain of Zinc Transporter STH_RS05130 PF00149 Calcineurin-like phosphoesterase STH_RS05130 PF00565 Staphylococcal nuclease homologue STH_RS05130 PF02872 5'-nucleotidase, C-terminal domain STH_RS05130 PF00746 LPXTG cell wall anchor motif STH_RS05140 PF01709 Transcriptional regulator STH_RS05145 PF01176 Translation initiation factor 1A / IF-1 STH_RS05160 PF00342 Phosphoglucose isomerase STH_RS05165 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) STH_RS05170 PF02417 Chromate transporter STH_RS05185 PF01522 Polysaccharide deacetylase STH_RS05190 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain STH_RS05190 PF00205 Thiamine pyrophosphate enzyme, central domain STH_RS05190 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain STH_RS05225 PF13472 GDSL-like Lipase/Acylhydrolase family STH_RS05235 PF00196 Bacterial regulatory proteins, luxR family STH_RS05235 PF00072 Response regulator receiver domain STH_RS05245 PF13193 AMP-binding enzyme C-terminal domain STH_RS05245 PF16177 Acetyl-coenzyme A synthetase N-terminus STH_RS05245 PF00501 AMP-binding enzyme STH_RS05250 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain STH_RS05250 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain STH_RS05260 PF03063 Prismane/CO dehydrogenase family STH_RS05270 PF00155 Aminotransferase class I and II STH_RS05275 PF02875 Mur ligase family, glutamate ligase domain STH_RS05275 PF08245 Mur ligase middle domain STH_RS05280 PF00817 impB/mucB/samB family STH_RS05280 PF11798 IMS family HHH motif STH_RS05280 PF11799 impB/mucB/samB family C-terminal domain STH_RS05285 PF00082 Subtilase family STH_RS05285 PF05922 Peptidase inhibitor I9 STH_RS05290 PF03144 Elongation factor Tu domain 2 STH_RS05290 PF00009 Elongation factor Tu GTP binding domain STH_RS05290 PF14492 Elongation Factor G, domain II STH_RS05290 PF00679 Elongation factor G C-terminus STH_RS05300 PF12911 N-terminal TM domain of oligopeptide transport permease C STH_RS05300 PF00528 Binding-protein-dependent transport system inner membrane component STH_RS05305 PF00528 Binding-protein-dependent transport system inner membrane component STH_RS05310 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle STH_RS05315 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain STH_RS05315 PF00591 Glycosyl transferase family, a/b domain STH_RS05315 PF02885 Glycosyl transferase family, helical bundle domain STH_RS05320 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) STH_RS05320 PF00072 Response regulator receiver domain STH_RS05320 PF01627 Hpt domain STH_RS05320 PF00672 HAMP domain STH_RS05320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase STH_RS05320 PF00512 His Kinase A (phospho-acceptor) domain STH_RS05325 PF00486 Transcriptional regulatory protein, C terminal STH_RS05325 PF00072 Response regulator receiver domain STH_RS05335 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle STH_RS05345 PF01106 NifU-like domain STH_RS05350 PF00485 Phosphoribulokinase / Uridine kinase family STH_RS05355 PF02777 Iron/manganese superoxide dismutases, C-terminal domain STH_RS05355 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain STH_RS05370 PF01904 Protein of unknown function DUF72 STH_RS05375 PF08281 Sigma-70, region 4 STH_RS05375 PF04542 Sigma-70 region 2 STH_RS05390 PF13735 tRNA nucleotidyltransferase domain 2 putative STH_RS05390 PF12627 Probable RNA and SrmB- binding site of polymerase A STH_RS05390 PF01743 Poly A polymerase head domain STH_RS05410 PF00497 Bacterial extracellular solute-binding proteins, family 3 STH_RS05415 PF00528 Binding-protein-dependent transport system inner membrane component STH_RS05420 PF00005 ABC transporter STH_RS05425 PF00881 Nitroreductase family STH_RS05430 PF07690 Major Facilitator Superfamily STH_RS05440 PF08353 Domain of unknown function (DUF1727) STH_RS05440 PF08245 Mur ligase middle domain STH_RS05445 PF07685 CobB/CobQ-like glutamine amidotransferase domain STH_RS05450 PF01510 N-acetylmuramoyl-L-alanine amidase STH_RS05465 PF01040 UbiA prenyltransferase family STH_RS05470 PF07992 Pyridine nucleotide-disulphide oxidoreductase STH_RS05475 PF09106 Elongation factor SelB, winged helix STH_RS05475 PF09107 Elongation factor SelB, winged helix STH_RS05475 PF03144 Elongation factor Tu domain 2 STH_RS05475 PF00009 Elongation factor Tu GTP binding domain STH_RS05475 PF09105 Elongation factor SelB, winged helix STH_RS05490 PF02557 D-alanyl-D-alanine carboxypeptidase STH_RS05505 PF04463 Protein of unknown function (DUF523) STH_RS05510 PF05343 M42 glutamyl aminopeptidase STH_RS05515 PF05343 M42 glutamyl aminopeptidase STH_RS05525 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain STH_RS05525 PF12729 Four helix bundle sensory module for signal transduction STH_RS05525 PF00672 HAMP domain STH_RS05530 PF13426 PAS domain STH_RS05530 PF08447 PAS fold STH_RS05530 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain STH_RS05535 PF00902 Sec-independent protein translocase protein (TatC) STH_RS05540 PF00005 ABC transporter STH_RS05540 PF12848 ABC transporter STH_RS05540 PF16326 ABC transporter C-terminal domain STH_RS05545 PF03807 NADP oxidoreductase coenzyme F420-dependent STH_RS05545 PF14748 Pyrroline-5-carboxylate reductase dimerisation STH_RS05560 PF07486 Cell Wall Hydrolase STH_RS05560 PF01471 Putative peptidoglycan binding domain STH_RS05565 PF14620 YpeB sporulation STH_RS05570 PF05198 Translation initiation factor IF-3, N-terminal domain STH_RS05570 PF00707 Translation initiation factor IF-3, C-terminal domain STH_RS05575 PF01632 Ribosomal protein L35 STH_RS05580 PF00453 Ribosomal protein L20 STH_RS05585 PF02080 TrkA-C domain STH_RS05585 PF02254 TrkA-N domain STH_RS05590 PF02386 Cation transport protein STH_RS05595 PF02080 TrkA-C domain STH_RS05595 PF02254 TrkA-N domain STH_RS05600 PF08032 RNA 2'-O ribose methyltransferase substrate binding STH_RS05600 PF00588 SpoU rRNA Methylase family STH_RS05620 PF13439 Glycosyltransferase Family 4 STH_RS05620 PF00534 Glycosyl transferases group 1 STH_RS05625 PF03023 Lipid II flippase MurJ STH_RS05635 PF01409 tRNA synthetases class II core domain (F) STH_RS05635 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain STH_RS05640 PF03484 tRNA synthetase B5 domain STH_RS05640 PF03147 Ferredoxin-fold anticodon binding domain STH_RS05640 PF01588 Putative tRNA binding domain STH_RS05640 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain STH_RS05640 PF03483 B3/4 domain STH_RS05645 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle STH_RS05650 PF00528 Binding-protein-dependent transport system inner membrane component STH_RS05655 PF00528 Binding-protein-dependent transport system inner membrane component STH_RS05655 PF12911 N-terminal TM domain of oligopeptide transport permease C STH_RS05660 PF00005 ABC transporter STH_RS05660 PF08352 Oligopeptide/dipeptide transporter, C-terminal region STH_RS05665 PF00005 ABC transporter STH_RS05665 PF08352 Oligopeptide/dipeptide transporter, C-terminal region STH_RS05710 PF00005 ABC transporter STH_RS05710 PF16326 ABC transporter C-terminal domain STH_RS05710 PF12848 ABC transporter STH_RS05715 PF06415 BPG-independent PGAM N-terminus (iPGM_N) STH_RS05715 PF01676 Metalloenzyme superfamily STH_RS05720 PF01713 Smr domain STH_RS05720 PF00488 MutS domain V STH_RS05725 PF01966 HD domain STH_RS05730 PF01408 Oxidoreductase family, NAD-binding Rossmann fold STH_RS05730 PF02894 Oxidoreductase family, C-terminal alpha/beta domain STH_RS05735 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain STH_RS05735 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III STH_RS05735 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II STH_RS05735 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I STH_RS05745 PF00483 Nucleotidyl transferase STH_RS05750 PF00905 Penicillin binding protein transpeptidase domain STH_RS05750 PF00912 Transglycosylase STH_RS05755 PF01479 S4 domain STH_RS05755 PF00579 tRNA synthetases class I (W and Y) STH_RS05765 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) STH_RS05775 PF00899 ThiF family STH_RS05780 PF00899 ThiF family STH_RS05790 PF00872 Transposase, Mutator family STH_RS05795 PF02796 Helix-turn-helix domain of resolvase STH_RS05795 PF00665 Integrase core domain STH_RS05810 PF00291 Pyridoxal-phosphate dependent enzyme STH_RS05830 PF01507 Phosphoadenosine phosphosulfate reductase family STH_RS05835 PF14306 PUA-like domain STH_RS05835 PF01747 ATP-sulfurylase STH_RS05840 PF00005 ABC transporter STH_RS05840 PF08402 TOBE domain STH_RS05850 PF00528 Binding-protein-dependent transport system inner membrane component STH_RS05855 PF07687 Peptidase dimerisation domain STH_RS05855 PF01546 Peptidase family M20/M25/M40 STH_RS05860 PF02540 NAD synthase STH_RS05875 PF08281 Sigma-70, region 4 STH_RS05875 PF04542 Sigma-70 region 2 STH_RS05890 PF00528 Binding-protein-dependent transport system inner membrane component STH_RS05895 PF08402 TOBE domain STH_RS05895 PF00005 ABC transporter STH_RS05900 PF13416 Bacterial extracellular solute-binding protein STH_RS05905 PF03816 Cell envelope-related transcriptional attenuator domain STH_RS05910 PF02075 Crossover junction endodeoxyribonuclease RuvC STH_RS05915 PF07499 RuvA, C-terminal domain STH_RS05915 PF01330 RuvA N terminal domain STH_RS05920 PF17864 RuvB AAA lid domain STH_RS05920 PF05491 RuvB C-terminal winged helix domain STH_RS05920 PF05496 Holliday junction DNA helicase RuvB P-loop domain STH_RS05925 PF04542 Sigma-70 region 2 STH_RS05940 PF02547 Queuosine biosynthesis protein STH_RS05945 PF01702 Queuine tRNA-ribosyltransferase STH_RS05950 PF00583 Acetyltransferase (GNAT) family STH_RS05955 PF02699 Preprotein translocase subunit STH_RS05965 PF04293 SpoVR like protein STH_RS05970 PF04285 Protein of unknown function (DUF444) STH_RS05975 PF08298 PrkA AAA domain STH_RS05975 PF06798 PrkA serine protein kinase C-terminal domain STH_RS06005 PF00072 Response regulator receiver domain STH_RS06005 PF00196 Bacterial regulatory proteins, luxR family STH_RS06045 PF02310 B12 binding domain STH_RS06045 PF01642 Methylmalonyl-CoA mutase STH_RS06050 PF01642 Methylmalonyl-CoA mutase STH_RS06050 PF02310 B12 binding domain STH_RS06060 PF01039 Carboxyl transferase domain STH_RS06065 PF00364 Biotin-requiring enzyme STH_RS06065 PF00682 HMGL-like STH_RS06065 PF02436 Conserved carboxylase domain STH_RS06075 PF00289 Biotin carboxylase, N-terminal domain STH_RS06075 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain STH_RS06075 PF02785 Biotin carboxylase C-terminal domain STH_RS06080 PF01812 5-formyltetrahydrofolate cyclo-ligase family STH_RS06095 PF00370 FGGY family of carbohydrate kinases, N-terminal domain STH_RS06095 PF02782 FGGY family of carbohydrate kinases, C-terminal domain STH_RS06100 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain STH_RS06100 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase STH_RS06105 PF13732 Domain of unknown function (DUF4162) STH_RS06105 PF00005 ABC transporter STH_RS06120 PF02381 MraZ protein, putative antitoxin-like STH_RS06125 PF01795 MraW methylase family STH_RS06135 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain STH_RS06135 PF00117 Glutamine amidotransferase class-I STH_RS06140 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain STH_RS06140 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain STH_RS06140 PF02142 MGS-like domain STH_RS06150 PF03717 Penicillin-binding Protein dimerisation domain STH_RS06150 PF03793 PASTA domain STH_RS06150 PF00905 Penicillin binding protein transpeptidase domain STH_RS06155 PF01225 Mur ligase family, catalytic domain STH_RS06155 PF02875 Mur ligase family, glutamate ligase domain STH_RS06155 PF08245 Mur ligase middle domain STH_RS06160 PF01225 Mur ligase family, catalytic domain STH_RS06160 PF08245 Mur ligase middle domain STH_RS06160 PF02875 Mur ligase family, glutamate ligase domain STH_RS06165 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 STH_RS06165 PF00953 Glycosyl transferase family 4 STH_RS06170 PF01098 Cell cycle protein STH_RS06175 PF04101 Glycosyltransferase family 28 C-terminal domain STH_RS06175 PF03033 Glycosyltransferase family 28 N-terminal domain STH_RS06180 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain STH_RS06180 PF01565 FAD binding domain STH_RS06185 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) STH_RS06190 PF03069 Acetamidase/Formamidase family STH_RS06200 PF03799 Cell division protein FtsQ STH_RS06200 PF08478 POTRA domain, FtsQ-type STH_RS06205 PF05949 Bacterial protein of unknown function (DUF881) STH_RS06210 PF06947 Protein of unknown function (DUF1290) STH_RS06215 PF02491 SHS2 domain inserted in FTSA STH_RS06220 PF12327 FtsZ family, C-terminal domain STH_RS06220 PF00091 Tubulin/FtsZ family, GTPase domain STH_RS06230 PF04542 Sigma-70 region 2 STH_RS06230 PF04545 Sigma-70, region 4 STH_RS06235 PF04542 Sigma-70 region 2 STH_RS06235 PF04539 Sigma-70 region 3 STH_RS06235 PF04545 Sigma-70, region 4 STH_RS06250 PF02578 Multi-copper polyphenol oxidoreductase laccase STH_RS06260 PF01168 Alanine racemase, N-terminal domain STH_RS06265 PF04472 Cell division protein SepF STH_RS06270 PF02325 YGGT family STH_RS06275 PF05103 DivIVA protein STH_RS06280 PF08264 Anticodon-binding domain of tRNA STH_RS06280 PF00133 tRNA synthetases class I (I, L, M and V) STH_RS06280 PF06827 Zinc finger found in FPG and IleRS STH_RS06285 PF02416 mttA/Hcf106 family STH_RS06290 PF02653 Branched-chain amino acid transport system / permease component STH_RS06295 PF02653 Branched-chain amino acid transport system / permease component STH_RS06300 PF00005 ABC transporter STH_RS06305 PF02608 ABC transporter substrate-binding protein PnrA-like STH_RS06310 PF07969 Amidohydrolase family STH_RS06315 PF01546 Peptidase family M20/M25/M40 STH_RS06315 PF07687 Peptidase dimerisation domain STH_RS06320 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle STH_RS06330 PF01258 Prokaryotic dksA/traR C4-type zinc finger STH_RS06335 PF01252 Signal peptidase (SPase) II STH_RS06340 PF01479 S4 domain STH_RS06340 PF00849 RNA pseudouridylate synthase STH_RS06345 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family STH_RS06350 PF01116 Fructose-bisphosphate aldolase class-II STH_RS06355 PF00294 pfkB family carbohydrate kinase STH_RS06360 PF03613 PTS system mannose/fructose/sorbose family IID component STH_RS06365 PF03609 PTS system sorbose-specific iic component STH_RS06370 PF03830 PTS system sorbose subfamily IIB component STH_RS06380 PF03830 PTS system sorbose subfamily IIB component STH_RS06380 PF03610 PTS system fructose IIA component STH_RS06385 PF01380 SIS domain STH_RS06390 PF00441 Acyl-CoA dehydrogenase, C-terminal domain STH_RS06390 PF02771 Acyl-CoA dehydrogenase, N-terminal domain STH_RS06390 PF02770 Acyl-CoA dehydrogenase, middle domain STH_RS06395 PF02515 CoA-transferase family III STH_RS06405 PF00156 Phosphoribosyl transferase domain STH_RS06410 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain STH_RS06410 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain STH_RS06415 PF01979 Amidohydrolase family STH_RS06420 PF00175 Oxidoreductase NAD-binding domain STH_RS06420 PF00970 Oxidoreductase FAD-binding domain STH_RS06420 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B STH_RS06425 PF01180 Dihydroorotate dehydrogenase STH_RS06430 PF00156 Phosphoribosyl transferase domain STH_RS06450 PF01906 Putative heavy-metal-binding STH_RS06460 PF00465 Iron-containing alcohol dehydrogenase STH_RS06470 PF00296 Luciferase-like monooxygenase STH_RS06480 PF07687 Peptidase dimerisation domain STH_RS06480 PF01546 Peptidase family M20/M25/M40 STH_RS06485 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) STH_RS06495 PF00370 FGGY family of carbohydrate kinases, N-terminal domain STH_RS06495 PF02782 FGGY family of carbohydrate kinases, C-terminal domain STH_RS06500 PF00282 Pyridoxal-dependent decarboxylase conserved domain STH_RS06505 PF03610 PTS system fructose IIA component STH_RS06505 PF00874 PRD domain STH_RS06505 PF00158 Sigma-54 interaction domain STH_RS06510 PF03610 PTS system fructose IIA component STH_RS06510 PF03830 PTS system sorbose subfamily IIB component STH_RS06515 PF03610 PTS system fructose IIA component STH_RS06520 PF03613 PTS system mannose/fructose/sorbose family IID component STH_RS06530 PF01979 Amidohydrolase family STH_RS06540 PF00005 ABC transporter STH_RS06550 PF01032 FecCD transport family STH_RS06555 PF01032 FecCD transport family STH_RS06600 PF01695 IstB-like ATP binding protein STH_RS06605 PF02796 Helix-turn-helix domain of resolvase STH_RS06605 PF00665 Integrase core domain STH_RS06615 PF00580 UvrD/REP helicase N-terminal domain STH_RS06615 PF13361 UvrD-like helicase C-terminal domain STH_RS06635 PF13361 UvrD-like helicase C-terminal domain STH_RS06635 PF00580 UvrD/REP helicase N-terminal domain STH_RS06650 PF00145 C-5 cytosine-specific DNA methylase STH_RS06655 PF01547 Bacterial extracellular solute-binding protein STH_RS06660 PF00528 Binding-protein-dependent transport system inner membrane component STH_RS06665 PF00528 Binding-protein-dependent transport system inner membrane component STH_RS06675 PF04041 beta-1,4-mannooligosaccharide phosphorylase STH_RS06680 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain STH_RS06685 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase STH_RS06685 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II STH_RS06685 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg STH_RS06690 PF03466 LysR substrate binding domain STH_RS06690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family STH_RS06695 PF00390 Malic enzyme, N-terminal domain STH_RS06695 PF03949 Malic enzyme, NAD binding domain STH_RS06700 PF00963 Cohesin domain STH_RS06700 PF00395 S-layer homology domain STH_RS06715 PF04073 Aminoacyl-tRNA editing domain STH_RS06725 PF01139 tRNA-splicing ligase RtcB STH_RS06740 PF01063 Amino-transferase class IV STH_RS06750 PF05670 NFACT protein RNA binding domain STH_RS06755 PF03060 Nitronate monooxygenase STH_RS06765 PF00690 Cation transporter/ATPase, N-terminus STH_RS06765 PF00689 Cation transporting ATPase, C-terminus STH_RS06775 PF03755 YicC-like family, N-terminal region STH_RS06775 PF08340 Domain of unknown function (DUF1732) STH_RS06780 PF04025 Domain of unknown function (DUF370) STH_RS06785 PF00625 Guanylate kinase STH_RS06790 PF01192 RNA polymerase Rpb6 STH_RS06795 PF02441 Flavoprotein STH_RS06795 PF04127 DNA / pantothenate metabolism flavoprotein STH_RS06800 PF00271 Helicase conserved C-terminal domain STH_RS06800 PF18074 Primosomal protein N C-terminal domain STH_RS06800 PF04851 Type III restriction enzyme, res subunit STH_RS06800 PF18319 PriA DNA helicase Cys-rich region (CRR) domain STH_RS06800 PF17764 3′ DNA-binding domain (3′BD) STH_RS06805 PF01327 Polypeptide deformylase STH_RS06810 PF02911 Formyl transferase, C-terminal domain STH_RS06810 PF00551 Formyl transferase STH_RS06815 PF04298 Putative neutral zinc metallopeptidase STH_RS06820 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) STH_RS06835 PF01029 NusB family STH_RS06835 PF01189 16S rRNA methyltransferase RsmB/F STH_RS06845 PF04055 Radical SAM superfamily STH_RS06855 PF00069 Protein kinase domain STH_RS06855 PF03793 PASTA domain STH_RS06860 PF03193 RsgA GTPase STH_RS06860 PF16745 RsgA N-terminal domain STH_RS06865 PF00834 Ribulose-phosphate 3 epimerase family STH_RS06870 PF01584 CheW-like domain STH_RS06875 PF01430 Hsp33 protein STH_RS06880 PF00830 Ribosomal L28 family STH_RS06885 PF03780 Asp23 family, cell envelope-related function STH_RS06890 PF13684 Dihydroxyacetone kinase family STH_RS06890 PF02734 DAK2 domain STH_RS06895 PF00535 Glycosyl transferase family 2 STH_RS06900 PF00534 Glycosyl transferases group 1 STH_RS06900 PF13439 Glycosyltransferase Family 4 STH_RS06905 PF13847 Methyltransferase domain STH_RS06905 PF03551 Transcriptional regulator PadR-like family STH_RS06910 PF01757 Acyltransferase family STH_RS06920 PF00534 Glycosyl transferases group 1 STH_RS06920 PF13439 Glycosyltransferase Family 4 STH_RS06930 PF16363 GDP-mannose 4,6 dehydratase STH_RS06935 PF16363 GDP-mannose 4,6 dehydratase STH_RS06940 PF00483 Nucleotidyl transferase STH_RS06945 PF04321 RmlD substrate binding domain STH_RS06950 PF00534 Glycosyl transferases group 1 STH_RS06950 PF13439 Glycosyltransferase Family 4 STH_RS07005 PF17191 RecG wedge domain STH_RS07005 PF00270 DEAD/DEAH box helicase STH_RS07005 PF00271 Helicase conserved C-terminal domain STH_RS07015 PF01434 Peptidase family M41 STH_RS07015 PF17862 AAA+ lid domain STH_RS07015 PF00004 ATPase family associated with various cellular activities (AAA) STH_RS07025 PF04143 Sulphur transport STH_RS07030 PF01206 Sulfurtransferase TusA STH_RS07035 PF01965 DJ-1/PfpI family STH_RS07040 PF01741 Large-conductance mechanosensitive channel, MscL STH_RS07045 PF12697 Alpha/beta hydrolase family STH_RS07090 PF02237 Biotin protein ligase C terminal domain STH_RS07090 PF08279 HTH domain STH_RS07090 PF03099 Biotin/lipoate A/B protein ligase family STH_RS07110 PF02632 BioY family STH_RS07120 PF07690 Major Facilitator Superfamily STH_RS07125 PF00425 chorismate binding enzyme STH_RS07125 PF04715 Anthranilate synthase component I, N terminal region STH_RS07130 PF00117 Glutamine amidotransferase class-I STH_RS07135 PF02885 Glycosyl transferase family, helical bundle domain STH_RS07135 PF00591 Glycosyl transferase family, a/b domain STH_RS07140 PF00149 Calcineurin-like phosphoesterase STH_RS07145 PF00579 tRNA synthetases class I (W and Y) STH_RS07150 PF00218 Indole-3-glycerol phosphate synthase STH_RS07155 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase STH_RS07160 PF00291 Pyridoxal-phosphate dependent enzyme STH_RS07165 PF00290 Tryptophan synthase alpha chain STH_RS07170 PF00793 DAHP synthetase I family STH_RS07170 PF18152 DAHP synthase ferredoxin-like domain STH_RS07175 PF01842 ACT domain STH_RS07175 PF02153 Prephenate dehydrogenase STH_RS07180 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) STH_RS07190 PF08447 PAS fold STH_RS07190 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain STH_RS07190 PF08447 PAS fold STH_RS07190 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain STH_RS07195 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle STH_RS07200 PF00528 Binding-protein-dependent transport system inner membrane component STH_RS07205 PF00528 Binding-protein-dependent transport system inner membrane component STH_RS07205 PF12911 N-terminal TM domain of oligopeptide transport permease C STH_RS07210 PF16654 Diaminopimelic acid dehydrogenase C-terminal domain STH_RS07210 PF01118 Semialdehyde dehydrogenase, NAD binding domain STH_RS07215 PF00005 ABC transporter STH_RS07215 PF00664 ABC transporter transmembrane region STH_RS07220 PF00664 ABC transporter transmembrane region STH_RS07220 PF00005 ABC transporter STH_RS07235 PF00269 Small, acid-soluble spore proteins, alpha/beta type STH_RS07240 PF00269 Small, acid-soluble spore proteins, alpha/beta type STH_RS07245 PF00269 Small, acid-soluble spore proteins, alpha/beta type STH_RS07250 PF03418 Germination protease STH_RS07260 PF02086 D12 class N6 adenine-specific DNA methyltransferase STH_RS07275 PF01467 Cytidylyltransferase-like STH_RS07285 PF05362 Lon protease (S16) C-terminal proteolytic domain STH_RS07285 PF13180 PDZ domain STH_RS07295 PF00583 Acetyltransferase (GNAT) family STH_RS07305 PF03061 Thioesterase superfamily STH_RS07310 PF02504 Fatty acid synthesis protein STH_RS07315 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal STH_RS07315 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III STH_RS07320 PF02645 Uncharacterised protein, DegV family COG1307 STH_RS07325 PF00698 Acyl transferase domain STH_RS07335 PF00550 Phosphopantetheine attachment site STH_RS07340 PF00035 Double-stranded RNA binding motif STH_RS07340 PF14622 Ribonuclease-III-like STH_RS07345 PF04232 Stage V sporulation protein S (SpoVS) STH_RS07350 PF06470 SMC proteins Flexible Hinge Domain STH_RS07350 PF02463 RecF/RecN/SMC N terminal domain STH_RS07355 PF00448 SRP54-type protein, GTPase domain STH_RS07355 PF02881 SRP54-type protein, helical bundle domain STH_RS07360 PF13411 MerR HTH family regulatory protein STH_RS07360 PF07739 TipAS antibiotic-recognition domain STH_RS07385 PF03819 MazG nucleotide pyrophosphohydrolase domain STH_RS07390 PF04297 Putative helix-turn-helix protein, YlxM / p13 like STH_RS07395 PF02978 Signal peptide binding domain STH_RS07395 PF00448 SRP54-type protein, GTPase domain STH_RS07395 PF02881 SRP54-type protein, helical bundle domain STH_RS07400 PF00886 Ribosomal protein S16 STH_RS07415 PF05239 PRC-barrel domain STH_RS07415 PF01782 RimM N-terminal domain STH_RS07420 PF01746 tRNA (Guanine-1)-methyltransferase STH_RS07425 PF01245 Ribosomal protein L19 STH_RS07430 PF10502 Signal peptidase, peptidase S26 STH_RS07435 PF01926 50S ribosome-binding GTPase STH_RS07440 PF01351 Ribonuclease HII STH_RS07445 PF02021 Uncharacterised protein family UPF0102 STH_RS07450 PF13335 Magnesium chelatase, subunit ChlI C-terminal STH_RS07450 PF01078 Magnesium chelatase, subunit ChlI STH_RS07470 PF02481 DNA recombination-mediator protein A STH_RS07470 PF17782 DprA winged helix domain STH_RS07475 PF01131 DNA topoisomerase STH_RS07475 PF01751 Toprim domain STH_RS07475 PF01396 Topoisomerase DNA binding C4 zinc finger STH_RS07480 PF01134 Glucose inhibited division protein A STH_RS07485 PF00589 Phage integrase family STH_RS07485 PF02899 Phage integrase, N-terminal SAM-like domain STH_RS07490 PF06018 CodY GAF-like domain STH_RS07490 PF08222 CodY helix-turn-helix domain STH_RS07525 PF00318 Ribosomal protein S2 STH_RS07530 PF00889 Elongation factor TS STH_RS07535 PF00696 Amino acid kinase family STH_RS07540 PF01765 Ribosome recycling factor STH_RS07550 PF01255 Putative undecaprenyl diphosphate synthase STH_RS07560 PF01594 AI-2E family transporter STH_RS07565 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase STH_RS07565 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain STH_RS07565 PF13288 DXP reductoisomerase C-terminal domain STH_RS07570 PF17820 PDZ domain STH_RS07570 PF02163 Peptidase family M50 STH_RS07575 PF04551 GcpE protein STH_RS07580 PF09180 Prolyl-tRNA synthetase, C-terminal STH_RS07580 PF03129 Anticodon binding domain STH_RS07580 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) STH_RS07585 PF01734 Patatin-like phospholipase STH_RS07595 PF01297 Zinc-uptake complex component A periplasmic STH_RS07600 PF00005 ABC transporter STH_RS07605 PF00950 ABC 3 transport family STH_RS07610 PF00950 ABC 3 transport family STH_RS07615 PF00535 Glycosyl transferase family 2 STH_RS07620 PF02308 MgtC family STH_RS07625 PF14480 DNA polymerase III polC-type N-terminus I STH_RS07625 PF17657 Bacterial DNA polymerase III alpha subunit finger domain STH_RS07625 PF07733 Bacterial DNA polymerase III alpha NTPase domain STH_RS07625 PF02811 PHP domain STH_RS07625 PF11490 DNA polymerase III polC-type N-terminus II STH_RS07625 PF14579 Helix-hairpin-helix motif STH_RS07625 PF00929 Exonuclease STH_RS07645 PF03747 ADP-ribosylglycohydrolase STH_RS07655 PF17384 RimP C-terminal SH3 domain STH_RS07655 PF02576 RimP N-terminal domain STH_RS07660 PF00575 S1 RNA binding domain STH_RS07660 PF08529 NusA N-terminal domain STH_RS07660 PF13184 NusA-like KH domain STH_RS07665 PF04296 Protein of unknown function (DUF448) STH_RS07670 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family STH_RS07675 PF00009 Elongation factor Tu GTP binding domain STH_RS07675 PF04760 Translation initiation factor IF-2, N-terminal region STH_RS07675 PF11987 Translation-initiation factor 2 STH_RS07680 PF02033 Ribosome-binding factor A STH_RS07685 PF02272 DHHA1 domain STH_RS07685 PF01368 DHH family STH_RS07690 PF16198 tRNA pseudouridylate synthase B C-terminal domain STH_RS07690 PF01509 TruB family pseudouridylate synthase (N terminal domain) STH_RS07695 PF06574 FAD synthetase STH_RS07695 PF01687 Riboflavin kinase STH_RS07700 PF00849 RNA pseudouridylate synthase STH_RS07700 PF01479 S4 domain STH_RS07705 PF00312 Ribosomal protein S15 STH_RS07710 PF04542 Sigma-70 region 2 STH_RS07710 PF08281 Sigma-70, region 4 STH_RS07720 PF00575 S1 RNA binding domain STH_RS07720 PF01138 3' exoribonuclease family, domain 1 STH_RS07720 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain STH_RS07720 PF00013 KH domain STH_RS07720 PF03725 3' exoribonuclease family, domain 2 STH_RS07725 PF05193 Peptidase M16 inactive domain STH_RS07725 PF00675 Insulinase (Peptidase family M16) STH_RS07730 PF00692 dUTPase STH_RS07740 PF01584 CheW-like domain STH_RS07745 PF01584 CheW-like domain STH_RS07750 PF01584 CheW-like domain STH_RS07750 PF02895 Signal transducing histidine kinase, homodimeric domain STH_RS07750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase STH_RS07750 PF01627 Hpt domain STH_RS07750 PF07194 P2 response regulator binding domain STH_RS07760 PF03975 CheD chemotactic sensory transduction STH_RS07765 PF00072 Response regulator receiver domain STH_RS07770 PF00072 Response regulator receiver domain STH_RS07770 PF01339 CheB methylesterase STH_RS07775 PF01739 CheR methyltransferase, SAM binding domain STH_RS07775 PF03705 CheR methyltransferase, all-alpha domain STH_RS07785 PF05173 Dihydrodipicolinate reductase, C-terminus STH_RS07785 PF01113 Dihydrodipicolinate reductase, N-terminus STH_RS07790 PF01262 Alanine dehydrogenase/PNT, C-terminal domain STH_RS07790 PF16924 Dipicolinate synthase subunit A N-terminal domain STH_RS07795 PF02441 Flavoprotein STH_RS07800 PF01118 Semialdehyde dehydrogenase, NAD binding domain STH_RS07800 PF02774 Semialdehyde dehydrogenase, dimerisation domain STH_RS07805 PF00696 Amino acid kinase family STH_RS07805 PF13840 ACT domain STH_RS07810 PF00701 Dihydrodipicolinate synthetase family STH_RS07815 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) STH_RS07820 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) STH_RS07845 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain STH_RS07845 PF17770 Ribonuclease J C-terminal domain STH_RS07845 PF00753 Metallo-beta-lactamase superfamily STH_RS07855 PF00574 Clp protease STH_RS07865 PF01475 Ferric uptake regulator family STH_RS07885 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase STH_RS07890 PF01040 UbiA prenyltransferase family STH_RS07900 PF01476 LysM domain STH_RS07900 PF00246 Zinc carboxypeptidase STH_RS07905 PF08139 Prokaryotic membrane lipoprotein lipid attachment site STH_RS07925 PF00441 Acyl-CoA dehydrogenase, C-terminal domain STH_RS07925 PF02770 Acyl-CoA dehydrogenase, middle domain STH_RS07925 PF02771 Acyl-CoA dehydrogenase, N-terminal domain STH_RS07930 PF00364 Biotin-requiring enzyme STH_RS07955 PF00378 Enoyl-CoA hydratase/isomerase STH_RS07965 PF01039 Carboxyl transferase domain STH_RS07980 PF01336 OB-fold nucleic acid binding domain STH_RS07980 PF00152 tRNA synthetases class II (D, K and N) STH_RS07995 PF07943 Penicillin-binding protein 5, C-terminal domain STH_RS07995 PF00768 D-alanyl-D-alanine carboxypeptidase STH_RS08000 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 STH_RS08005 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit STH_RS08010 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit STH_RS08015 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit STH_RS08025 PF10531 SLBB domain STH_RS08025 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region STH_RS08025 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit STH_RS08030 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region STH_RS08030 PF01568 Molydopterin dinucleotide binding domain STH_RS08030 PF00384 Molybdopterin oxidoreductase STH_RS08030 PF04879 Molybdopterin oxidoreductase Fe4S4 domain STH_RS08035 PF00146 NADH dehydrogenase STH_RS08040 PF12838 4Fe-4S dicluster domain STH_RS08045 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 STH_RS08050 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L STH_RS08055 PF00361 Proton-conducting membrane transporter STH_RS08055 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus STH_RS08060 PF00361 Proton-conducting membrane transporter STH_RS08070 PF12833 Helix-turn-helix domain STH_RS08070 PF01497 Periplasmic binding protein STH_RS08075 PF01032 FecCD transport family STH_RS08080 PF01032 FecCD transport family STH_RS08085 PF00005 ABC transporter STH_RS08090 PF01497 Periplasmic binding protein STH_RS08120 PF07687 Peptidase dimerisation domain STH_RS08120 PF01546 Peptidase family M20/M25/M40 STH_RS08130 PF00994 Probable molybdopterin binding domain STH_RS08135 PF17284 Spermidine synthase tetramerisation domain STH_RS08145 PF02653 Branched-chain amino acid transport system / permease component STH_RS08150 PF02653 Branched-chain amino acid transport system / permease component STH_RS08155 PF00005 ABC transporter STH_RS08155 PF12399 Branched-chain amino acid ATP-binding cassette transporter STH_RS08160 PF00005 ABC transporter STH_RS08165 PF13186 Iron-sulfur cluster-binding domain STH_RS08165 PF04055 Radical SAM superfamily STH_RS08185 PF00270 DEAD/DEAH box helicase STH_RS08185 PF09369 Domain of unknown function (DUF1998) STH_RS08185 PF00271 Helicase conserved C-terminal domain STH_RS08190 PF13439 Glycosyltransferase Family 4 STH_RS08190 PF00534 Glycosyl transferases group 1 STH_RS08195 PF00403 Heavy-metal-associated domain STH_RS08200 PF01022 Bacterial regulatory protein, arsR family STH_RS08205 PF03965 Penicillinase repressor STH_RS08215 PF00005 ABC transporter STH_RS08230 PF18693 TRAM domain STH_RS08230 PF04055 Radical SAM superfamily STH_RS08230 PF00919 Uncharacterized protein family UPF0004 STH_RS08235 PF04073 Aminoacyl-tRNA editing domain STH_RS08255 PF00004 ATPase family associated with various cellular activities (AAA) STH_RS08255 PF17862 AAA+ lid domain STH_RS08255 PF01434 Peptidase family M41 STH_RS08270 PF05504 Spore germination B3/ GerAC like, C-terminal STH_RS08275 PF03323 Bacillus/Clostridium GerA spore germination protein STH_RS08280 PF00994 Probable molybdopterin binding domain STH_RS08280 PF18146 Damage-inducible protein CinA KH domain STH_RS08280 PF02464 Competence-damaged protein STH_RS08285 PF00480 ROK family STH_RS08285 PF01325 Iron dependent repressor, N-terminal DNA binding domain STH_RS08290 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain STH_RS08290 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain STH_RS08295 PF02142 MGS-like domain STH_RS08300 PF00270 DEAD/DEAH box helicase STH_RS08300 PF00271 Helicase conserved C-terminal domain STH_RS08315 PF00005 ABC transporter STH_RS08320 PF00528 Binding-protein-dependent transport system inner membrane component STH_RS08335 PF00361 Proton-conducting membrane transporter STH_RS08335 PF13244 Domain of unknown function (DUF4040) STH_RS08335 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus STH_RS08340 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter STH_RS08345 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L STH_RS08350 PF00361 Proton-conducting membrane transporter STH_RS08355 PF01899 Na+/H+ ion antiporter subunit STH_RS08365 PF03334 Na+/H+ antiporter subunit STH_RS08380 PF02834 LigT like Phosphoesterase STH_RS08385 PF00154 recA bacterial DNA recombination protein STH_RS08400 PF02224 Cytidylate kinase STH_RS08410 PF00575 S1 RNA binding domain STH_RS08415 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) STH_RS08420 PF01131 DNA topoisomerase STH_RS08420 PF01751 Toprim domain STH_RS08425 PF09861 Lactate racemase N-terminal domain STH_RS08430 PF01070 FMN-dependent dehydrogenase STH_RS08455 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal STH_RS08455 PF01926 50S ribosome-binding GTPase STH_RS08460 PF02660 Glycerol-3-phosphate acyltransferase STH_RS08465 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus STH_RS08465 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus STH_RS08480 PF09547 Stage IV sporulation protein A (spore_IV_A) STH_RS08485 PF00561 alpha/beta hydrolase fold STH_RS08490 PF13840 ACT domain STH_RS08490 PF01842 ACT domain STH_RS08490 PF00696 Amino acid kinase family STH_RS08500 PF03606 C4-dicarboxylate anaerobic carrier STH_RS08505 PF01546 Peptidase family M20/M25/M40 STH_RS08505 PF07687 Peptidase dimerisation domain STH_RS08510 PF01546 Peptidase family M20/M25/M40 STH_RS08510 PF07687 Peptidase dimerisation domain STH_RS08515 PF02322 Cytochrome bd terminal oxidase subunit II STH_RS08520 PF01654 Cytochrome bd terminal oxidase subunit I STH_RS08530 PF00334 Nucleoside diphosphate kinase STH_RS08535 PF01476 LysM domain STH_RS08535 PF01551 Peptidase family M23 STH_RS08540 PF01048 Phosphorylase superfamily STH_RS08545 PF05221 S-adenosyl-L-homocysteine hydrolase STH_RS08545 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain STH_RS08555 PF00990 Diguanylate cyclase, GGDEF domain STH_RS08555 PF00563 EAL domain STH_RS08555 PF08448 PAS fold STH_RS08575 PF01979 Amidohydrolase family STH_RS08580 PF00005 ABC transporter STH_RS08595 PF00248 Aldo/keto reductase family STH_RS08610 PF06133 Control of competence regulator ComK, YlbF/YmcA STH_RS08615 PF04029 2-phosphosulpholactate phosphatase STH_RS08625 PF00929 Exonuclease STH_RS08625 PF04851 Type III restriction enzyme, res subunit STH_RS08625 PF13307 Helicase C-terminal domain STH_RS08630 PF01975 Survival protein SurE STH_RS08635 PF02666 Phosphatidylserine decarboxylase STH_RS08665 PF02491 SHS2 domain inserted in FTSA STH_RS08695 PF14815 NUDIX domain STH_RS08695 PF00633 Helix-hairpin-helix motif STH_RS08695 PF00730 HhH-GPD superfamily base excision DNA repair protein STH_RS08710 PF01578 Cytochrome C assembly protein STH_RS08715 PF05140 ResB-like family STH_RS08720 PF02683 Cytochrome C biogenesis protein transmembrane region STH_RS08725 PF00578 AhpC/TSA family STH_RS08740 PF01726 LexA DNA binding domain STH_RS08740 PF00717 Peptidase S24-like STH_RS08750 PF06838 Methionine gamma-lyase STH_RS08765 PF08281 Sigma-70, region 4 STH_RS08765 PF04542 Sigma-70 region 2 STH_RS08775 PF00005 ABC transporter STH_RS08785 PF17866 AAA lid domain STH_RS08785 PF00004 ATPase family associated with various cellular activities (AAA) STH_RS08790 PF17209 Hfq protein STH_RS08800 PF08676 MutL C terminal dimerisation domain STH_RS08800 PF01119 DNA mismatch repair protein, C-terminal domain STH_RS08840 PF05190 MutS family domain IV STH_RS08840 PF01624 MutS domain I STH_RS08840 PF05188 MutS domain II STH_RS08840 PF00488 MutS domain V STH_RS08840 PF05192 MutS domain III STH_RS08850 PF04055 Radical SAM superfamily STH_RS08850 PF01938 TRAM domain STH_RS08850 PF00919 Uncharacterized protein family UPF0004 STH_RS08860 PF01641 SelR domain STH_RS08860 PF01625 Peptide methionine sulfoxide reductase STH_RS08865 PF07992 Pyridine nucleotide-disulphide oxidoreductase STH_RS08865 PF13192 Thioredoxin domain STH_RS08880 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) STH_RS08890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family STH_RS08890 PF03466 LysR substrate binding domain STH_RS08905 PF17863 AAA lid domain STH_RS08905 PF07726 ATPase family associated with various cellular activities (AAA) STH_RS08920 PF02811 PHP domain STH_RS08925 PF02789 Cytosol aminopeptidase family, N-terminal domain STH_RS08925 PF00883 Cytosol aminopeptidase family, catalytic domain STH_RS08930 PF01244 Membrane dipeptidase (Peptidase family M19) STH_RS08935 PF04232 Stage V sporulation protein S (SpoVS) STH_RS08940 PF13277 YmdB-like protein STH_RS08950 PF12072 Domain of unknown function (DUF3552) STH_RS08950 PF00013 KH domain STH_RS08950 PF01966 HD domain STH_RS08965 PF03459 TOBE domain STH_RS08965 PF00005 ABC transporter STH_RS08965 PF17912 MalK OB fold domain STH_RS08970 PF00849 RNA pseudouridylate synthase STH_RS08970 PF01479 S4 domain STH_RS08985 PF07670 Nucleoside recognition STH_RS08990 PF07670 Nucleoside recognition STH_RS09005 PF00704 Glycosyl hydrolases family 18 STH_RS09025 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) STH_RS09040 PF01068 ATP dependent DNA ligase domain STH_RS09040 PF13298 DNA polymerase Ligase (LigD) STH_RS09040 PF04679 ATP dependent DNA ligase C terminal region STH_RS09050 PF09579 Sporulation protein YtfJ (Spore_YtfJ) STH_RS09065 PF04079 Segregation and condensation complex subunit ScpB STH_RS09070 PF02616 Segregation and condensation protein ScpA STH_RS09075 PF02163 Peptidase family M50 STH_RS09080 PF01368 DHH family STH_RS09080 PF01743 Poly A polymerase head domain STH_RS09080 PF12627 Probable RNA and SrmB- binding site of polymerase A STH_RS09080 PF02272 DHHA1 domain STH_RS09080 PF00571 CBS domain STH_RS09090 PF00731 AIR carboxylase STH_RS09095 PF02222 ATP-grasp domain STH_RS09095 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain STH_RS09100 PF00005 ABC transporter STH_RS09100 PF02687 FtsX-like permease family STH_RS09100 PF12704 MacB-like periplasmic core domain STH_RS09110 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain STH_RS09110 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain STH_RS09115 PF14097 Stage V sporulation protein AE1 STH_RS09120 PF04542 Sigma-70 region 2 STH_RS09120 PF04539 Sigma-70 region 3 STH_RS09120 PF04545 Sigma-70, region 4 STH_RS09125 PF13581 Histidine kinase-like ATPase domain STH_RS09130 PF01740 STAS domain STH_RS09135 PF07943 Penicillin-binding protein 5, C-terminal domain STH_RS09135 PF00768 D-alanyl-D-alanine carboxypeptidase STH_RS09140 PF00005 ABC transporter STH_RS09160 PF01676 Metalloenzyme superfamily STH_RS09165 PF00589 Phage integrase family STH_RS09165 PF02899 Phage integrase, N-terminal SAM-like domain STH_RS09170 PF01262 Alanine dehydrogenase/PNT, C-terminal domain STH_RS09170 PF05222 Alanine dehydrogenase/PNT, N-terminal domain STH_RS09185 PF00293 NUDIX domain STH_RS09190 PF00871 Acetokinase family STH_RS09195 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain STH_RS09195 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase STH_RS09200 PF01515 Phosphate acetyl/butaryl transferase STH_RS09205 PF00871 Acetokinase family STH_RS09210 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain STH_RS09210 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase STH_RS09215 PF00989 PAS fold STH_RS09215 PF02954 Bacterial regulatory protein, Fis family STH_RS09215 PF00158 Sigma-54 interaction domain STH_RS09220 PF00072 Response regulator receiver domain STH_RS09220 PF08769 Sporulation initiation factor Spo0A C terminal STH_RS09225 PF05580 SpoIVB peptidase S55 STH_RS09225 PF17820 PDZ domain STH_RS09230 PF02463 RecF/RecN/SMC N terminal domain STH_RS09235 PF01316 Arginine repressor, DNA binding domain STH_RS09235 PF02863 Arginine repressor, C-terminal domain STH_RS09240 PF01513 ATP-NAD kinase STH_RS09255 PF01479 S4 domain STH_RS09255 PF01728 FtsJ-like methyltransferase STH_RS09260 PF13292 1-deoxy-D-xylulose-5-phosphate synthase STH_RS09260 PF02779 Transketolase, pyrimidine binding domain STH_RS09260 PF02780 Transketolase, C-terminal domain STH_RS09270 PF00348 Polyprenyl synthetase STH_RS09275 PF02609 Exonuclease VII small subunit STH_RS09280 PF13742 OB-fold nucleic acid binding domain STH_RS09280 PF02601 Exonuclease VII, large subunit STH_RS09285 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain STH_RS09285 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain STH_RS09290 PF00814 Glycoprotease family STH_RS09295 PF01029 NusB family STH_RS09310 PF03780 Asp23 family, cell envelope-related function STH_RS09335 PF09581 Stage III sporulation protein AF (Spore_III_AF) STH_RS09340 PF09546 Stage III sporulation protein AE (spore_III_AE) STH_RS09345 PF06686 Stage III sporulation protein AC/AD protein family STH_RS09350 PF06686 Stage III sporulation protein AC/AD protein family STH_RS09370 PF08207 Elongation factor P (EF-P) KOW-like domain STH_RS09370 PF01132 Elongation factor P (EF-P) OB domain STH_RS09370 PF09285 Elongation factor P, C-terminal STH_RS09375 PF00557 Metallopeptidase family M24 STH_RS09375 PF01321 Creatinase/Prolidase N-terminal domain STH_RS09380 PF01220 Dehydroquinase class II STH_RS09390 PF01694 Rhomboid family STH_RS09410 PF00155 Aminotransferase class I and II STH_RS09415 PF08240 Alcohol dehydrogenase GroES-like domain STH_RS09415 PF00107 Zinc-binding dehydrogenase STH_RS09425 PF00106 short chain dehydrogenase STH_RS09430 PF03061 Thioesterase superfamily STH_RS09445 PF00950 ABC 3 transport family STH_RS09450 PF00005 ABC transporter STH_RS09455 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment STH_RS09455 PF01297 Zinc-uptake complex component A periplasmic STH_RS09460 PF01475 Ferric uptake regulator family STH_RS09475 PF17657 Bacterial DNA polymerase III alpha subunit finger domain STH_RS09475 PF07733 Bacterial DNA polymerase III alpha NTPase domain STH_RS09475 PF14579 Helix-hairpin-helix motif STH_RS09475 PF02811 PHP domain STH_RS09495 PF01613 Flavin reductase like domain STH_RS09500 PF00849 RNA pseudouridylate synthase STH_RS09505 PF00571 CBS domain STH_RS09510 PF03816 Cell envelope-related transcriptional attenuator domain STH_RS09515 PF02416 mttA/Hcf106 family STH_RS09545 PF03576 Peptidase family S58 STH_RS09550 PF12822 ECF transporter, substrate-specific component STH_RS09565 PF08241 Methyltransferase domain STH_RS09585 PF18766 SWI2/SNF2 ATPase STH_RS09585 PF11867 Domain of unknown function (DUF3387) STH_RS09585 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) STH_RS09590 PF01420 Type I restriction modification DNA specificity domain STH_RS09595 PF02384 N-6 DNA Methylase STH_RS09610 PF01979 Amidohydrolase family STH_RS09615 PF01979 Amidohydrolase family STH_RS09630 PF00464 Serine hydroxymethyltransferase STH_RS09635 PF03099 Biotin/lipoate A/B protein ligase family STH_RS09640 PF02347 Glycine cleavage system P-protein STH_RS09645 PF02347 Glycine cleavage system P-protein STH_RS09650 PF01597 Glycine cleavage H-protein STH_RS09655 PF01571 Aminomethyltransferase folate-binding domain STH_RS09655 PF08669 Glycine cleavage T-protein C-terminal barrel domain STH_RS09670 PF00155 Aminotransferase class I and II STH_RS09675 PF02654 Cobalamin-5-phosphate synthase STH_RS09680 PF03186 CobD/Cbib protein STH_RS09685 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase STH_RS09690 PF01497 Periplasmic binding protein STH_RS09705 PF07685 CobB/CobQ-like glutamine amidotransferase domain STH_RS09705 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain STH_RS09710 PF00005 ABC transporter STH_RS09715 PF01032 FecCD transport family STH_RS09725 PF13580 SIS domain STH_RS09730 PF01979 Amidohydrolase family STH_RS09740 PF03830 PTS system sorbose subfamily IIB component STH_RS09745 PF03830 PTS system sorbose subfamily IIB component STH_RS09745 PF03610 PTS system fructose IIA component STH_RS09775 PF00180 Isocitrate/isopropylmalate dehydrogenase STH_RS09780 PF04227 Indigoidine synthase A like protein STH_RS09785 PF01761 3-dehydroquinate synthase STH_RS09790 PF01202 Shikimate kinase STH_RS09795 PF01264 Chorismate synthase STH_RS09805 PF18317 Shikimate 5'-dehydrogenase C-terminal domain STH_RS09805 PF08501 Shikimate dehydrogenase substrate binding domain STH_RS09805 PF01488 Shikimate / quinate 5-dehydrogenase STH_RS09820 PF00528 Binding-protein-dependent transport system inner membrane component STH_RS09820 PF12911 N-terminal TM domain of oligopeptide transport permease C STH_RS09825 PF00528 Binding-protein-dependent transport system inner membrane component STH_RS09835 PF04545 Sigma-70, region 4 STH_RS09835 PF04542 Sigma-70 region 2 STH_RS09845 PF00005 ABC transporter STH_RS09860 PF00583 Acetyltransferase (GNAT) family STH_RS09875 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 STH_RS09875 PF00367 phosphotransferase system, EIIB STH_RS09885 PF00005 ABC transporter STH_RS09890 PF00528 Binding-protein-dependent transport system inner membrane component STH_RS09895 PF01580 FtsK/SpoIIIE family STH_RS09895 PF09397 Ftsk gamma domain STH_RS09895 PF17854 FtsK alpha domain STH_RS09900 PF13673 Acetyltransferase (GNAT) domain STH_RS09905 PF00664 ABC transporter transmembrane region STH_RS09905 PF00005 ABC transporter STH_RS09910 PF01145 SPFH domain / Band 7 family STH_RS09915 PF12221 Bacterial membrane protein N terminal STH_RS09915 PF01145 SPFH domain / Band 7 family STH_RS09925 PF03167 Uracil DNA glycosylase superfamily STH_RS09935 PF02535 ZIP Zinc transporter STH_RS09940 PF01476 LysM domain STH_RS09940 PF00704 Glycosyl hydrolases family 18 STH_RS09945 PF01238 Phosphomannose isomerase type I STH_RS09950 PF13183 4Fe-4S dicluster domain STH_RS09950 PF02754 Cysteine-rich domain STH_RS09955 PF00890 FAD binding domain STH_RS09960 PF01266 FAD dependent oxidoreductase STH_RS09960 PF04324 BFD-like [2Fe-2S] binding domain STH_RS09970 PF08502 LeuA allosteric (dimerisation) domain STH_RS09970 PF00682 HMGL-like STH_RS09995 PF00106 short chain dehydrogenase STH_RS10000 PF00905 Penicillin binding protein transpeptidase domain STH_RS10005 PF02618 YceG-like family STH_RS10010 PF06949 Protein of unknown function (DUF1292) STH_RS10015 PF03652 Holliday junction resolvase STH_RS10025 PF01743 Poly A polymerase head domain STH_RS10025 PF12627 Probable RNA and SrmB- binding site of polymerase A STH_RS10025 PF01368 DHH family STH_RS10025 PF00571 CBS domain STH_RS10025 PF02272 DHHA1 domain STH_RS10035 PF06135 IreB regulatory phosphoprotein STH_RS10045 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain STH_RS10045 PF01411 tRNA synthetases class II (A) STH_RS10045 PF02272 DHHA1 domain STH_RS10055 PF04539 Sigma-70 region 3 STH_RS10055 PF04542 Sigma-70 region 2 STH_RS10055 PF04545 Sigma-70, region 4 STH_RS10075 PF16736 Single Cache-like STH_RS10075 PF00989 PAS fold STH_RS10075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase STH_RS10075 PF00512 His Kinase A (phospho-acceptor) domain STH_RS10080 PF00486 Transcriptional regulatory protein, C terminal STH_RS10080 PF00072 Response regulator receiver domain STH_RS10100 PF02742 Iron dependent repressor, metal binding and dimerisation domain STH_RS10100 PF01325 Iron dependent repressor, N-terminal DNA binding domain STH_RS10105 PF07690 Major Facilitator Superfamily STH_RS10115 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) STH_RS10120 PF00005 ABC transporter STH_RS10120 PF00664 ABC transporter transmembrane region STH_RS10125 PF00664 ABC transporter transmembrane region STH_RS10125 PF00005 ABC transporter STH_RS10150 PF00144 Beta-lactamase STH_RS10160 PF16658 Class II release factor RF3, C-terminal domain STH_RS10160 PF03144 Elongation factor Tu domain 2 STH_RS10160 PF00009 Elongation factor Tu GTP binding domain STH_RS10170 PF00595 PDZ domain STH_RS10175 PF00293 NUDIX domain STH_RS10175 PF09297 NADH pyrophosphatase zinc ribbon domain STH_RS10190 PF01351 Ribonuclease HII STH_RS10195 PF02698 DUF218 domain STH_RS10215 PF00005 ABC transporter STH_RS10220 PF01458 Uncharacterized protein family (UPF0051) STH_RS10225 PF00266 Aminotransferase class-V STH_RS10230 PF01592 NifU-like N terminal domain STH_RS10235 PF01458 Uncharacterized protein family (UPF0051) STH_RS10240 PF00355 Rieske [2Fe-2S] domain STH_RS10245 PF01883 Iron-sulfur cluster assembly protein STH_RS10260 PF08281 Sigma-70, region 4 STH_RS10260 PF04542 Sigma-70 region 2 STH_RS10270 PF12146 Serine aminopeptidase, S33 STH_RS10280 PF00034 Cytochrome c STH_RS10280 PF03150 Di-haem cytochrome c peroxidase STH_RS10290 PF00465 Iron-containing alcohol dehydrogenase STH_RS10320 PF13247 4Fe-4S dicluster domain STH_RS10325 PF01568 Molydopterin dinucleotide binding domain STH_RS10325 PF00384 Molybdopterin oxidoreductase STH_RS10325 PF04879 Molybdopterin oxidoreductase Fe4S4 domain STH_RS10330 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) STH_RS10350 PF00936 BMC domain STH_RS10355 PF06277 Ethanolamine utilisation protein EutA STH_RS10360 PF06751 Ethanolamine ammonia lyase large subunit (EutB) STH_RS10375 PF07690 Major Facilitator Superfamily STH_RS10380 PF01008 Initiation factor 2 subunit family STH_RS10400 PF06445 GyrI-like small molecule binding domain STH_RS10400 PF12833 Helix-turn-helix domain STH_RS10410 PF00005 ABC transporter STH_RS10415 PF03551 Transcriptional regulator PadR-like family STH_RS10420 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) STH_RS10435 PF01568 Molydopterin dinucleotide binding domain STH_RS10435 PF04879 Molybdopterin oxidoreductase Fe4S4 domain STH_RS10435 PF00384 Molybdopterin oxidoreductase STH_RS10445 PF13247 4Fe-4S dicluster domain STH_RS10470 PF00158 Sigma-54 interaction domain STH_RS10470 PF00072 Response regulator receiver domain STH_RS10470 PF02954 Bacterial regulatory protein, Fis family STH_RS10475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase STH_RS10475 PF00512 His Kinase A (phospho-acceptor) domain STH_RS10475 PF00989 PAS fold STH_RS10475 PF13188 PAS domain STH_RS10475 PF13426 PAS domain STH_RS10500 PF01040 UbiA prenyltransferase family STH_RS10515 PF00116 Cytochrome C oxidase subunit II, periplasmic domain STH_RS10515 PF00034 Cytochrome c STH_RS10515 PF02790 Cytochrome C oxidase subunit II, transmembrane domain STH_RS10520 PF00115 Cytochrome C and Quinol oxidase polypeptide I STH_RS10525 PF00510 Cytochrome c oxidase subunit III STH_RS10535 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) STH_RS10545 PF00326 Prolyl oligopeptidase family STH_RS10560 PF03845 Spore germination protein STH_RS10565 PF03323 Bacillus/Clostridium GerA spore germination protein STH_RS10570 PF12679 ABC-2 family transporter protein STH_RS10575 PF00005 ABC transporter STH_RS10590 PF00892 EamA-like transporter family STH_RS10610 PF00694 Aconitase C-terminal domain STH_RS10615 PF00330 Aconitase family (aconitate hydratase) STH_RS10620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family STH_RS10620 PF03466 LysR substrate binding domain STH_RS10635 PF01699 Sodium/calcium exchanger protein STH_RS10640 PF02780 Transketolase, C-terminal domain STH_RS10640 PF02779 Transketolase, pyrimidine binding domain STH_RS10640 PF00456 Transketolase, thiamine diphosphate binding domain STH_RS10650 PF01926 50S ribosome-binding GTPase STH_RS10650 PF13167 GTP-binding GTPase N-terminal STH_RS10650 PF16360 GTP-binding GTPase Middle Region STH_RS10660 PF07859 alpha/beta hydrolase fold STH_RS10670 PF00912 Transglycosylase STH_RS10670 PF00905 Penicillin binding protein transpeptidase domain STH_RS10695 PF03793 PASTA domain STH_RS10695 PF00905 Penicillin binding protein transpeptidase domain STH_RS10695 PF03717 Penicillin-binding Protein dimerisation domain STH_RS10700 PF08460 Bacterial SH3 domain STH_RS10700 PF01551 Peptidase family M23 STH_RS10705 PF09186 Domain of unknown function (DUF1949) STH_RS10705 PF01205 Uncharacterized protein family UPF0029 STH_RS10725 PF07670 Nucleoside recognition STH_RS10725 PF02421 Ferrous iron transport protein B STH_RS10725 PF17910 FeoB cytosolic helical domain STH_RS10725 PF07664 Ferrous iron transport protein B C terminus STH_RS10725 PF04023 FeoA domain STH_RS10740 PF00196 Bacterial regulatory proteins, luxR family STH_RS10740 PF00072 Response regulator receiver domain STH_RS10745 PF09335 SNARE associated Golgi protein STH_RS10760 PF00072 Response regulator receiver domain STH_RS10765 PF11871 Domain of unknown function (DUF3391) STH_RS10765 PF01966 HD domain STH_RS10780 PF01022 Bacterial regulatory protein, arsR family STH_RS10785 PF00293 NUDIX domain STH_RS10795 PF08331 Domain of unknown function (DUF1730) STH_RS10800 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family STH_RS10800 PF04055 Radical SAM superfamily STH_RS10810 PF01048 Phosphorylase superfamily STH_RS10820 PF02361 Cobalt transport protein STH_RS10825 PF00005 ABC transporter STH_RS10830 PF00005 ABC transporter STH_RS10835 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) STH_RS10835 PF00364 Biotin-requiring enzyme STH_RS10835 PF02817 e3 binding domain STH_RS10840 PF02779 Transketolase, pyrimidine binding domain STH_RS10840 PF02780 Transketolase, C-terminal domain STH_RS10845 PF00676 Dehydrogenase E1 component STH_RS10850 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain STH_RS10850 PF07992 Pyridine nucleotide-disulphide oxidoreductase STH_RS10855 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain STH_RS10855 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain STH_RS10865 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain STH_RS10875 PF01522 Polysaccharide deacetylase STH_RS10885 PF06826 Predicted Permease Membrane Region STH_RS10885 PF02080 TrkA-C domain STH_RS10890 PF13361 UvrD-like helicase C-terminal domain STH_RS10890 PF00580 UvrD/REP helicase N-terminal domain STH_RS10890 PF12705 PD-(D/E)XK nuclease superfamily STH_RS10895 PF13361 UvrD-like helicase C-terminal domain STH_RS10895 PF12705 PD-(D/E)XK nuclease superfamily STH_RS10905 PF00149 Calcineurin-like phosphoesterase STH_RS10905 PF12320 Type 5 capsule protein repressor C-terminal domain STH_RS10915 PF13416 Bacterial extracellular solute-binding protein STH_RS10920 PF00528 Binding-protein-dependent transport system inner membrane component STH_RS10925 PF00528 Binding-protein-dependent transport system inner membrane component STH_RS10930 PF02785 Biotin carboxylase C-terminal domain STH_RS10930 PF00289 Biotin carboxylase, N-terminal domain STH_RS10930 PF00364 Biotin-requiring enzyme STH_RS10930 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain STH_RS10930 PF02436 Conserved carboxylase domain STH_RS10930 PF00682 HMGL-like STH_RS10935 PF13411 MerR HTH family regulatory protein STH_RS10935 PF07739 TipAS antibiotic-recognition domain STH_RS10940 PF01430 Hsp33 protein STH_RS10950 PF01434 Peptidase family M41 STH_RS10950 PF06480 FtsH Extracellular STH_RS10950 PF17862 AAA+ lid domain STH_RS10950 PF00004 ATPase family associated with various cellular activities (AAA) STH_RS10960 PF17934 Tetracyclin repressor-like, C-terminal domain STH_RS10960 PF00440 Bacterial regulatory proteins, tetR family STH_RS10965 PF13193 AMP-binding enzyme C-terminal domain STH_RS10965 PF00501 AMP-binding enzyme STH_RS10970 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal STH_RS10970 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III STH_RS10980 PF12399 Branched-chain amino acid ATP-binding cassette transporter STH_RS10980 PF00005 ABC transporter STH_RS10985 PF00005 ABC transporter STH_RS10990 PF02653 Branched-chain amino acid transport system / permease component STH_RS11000 PF00331 Glycosyl hydrolase family 10 STH_RS11000 PF06452 Carbohydrate family 9 binding domain-like STH_RS11000 PF00395 S-layer homology domain STH_RS11000 PF02018 Carbohydrate binding domain STH_RS11005 PF01734 Patatin-like phospholipase STH_RS11045 PF02625 XdhC and CoxI family STH_RS11045 PF13478 XdhC Rossmann domain STH_RS11055 PF07690 Major Facilitator Superfamily STH_RS11065 PF00005 ABC transporter STH_RS11120 PF04143 Sulphur transport STH_RS11155 PF01970 Tripartite tricarboxylate transporter TctA family STH_RS11170 PF00465 Iron-containing alcohol dehydrogenase STH_RS11175 PF04166 Pyridoxal phosphate biosynthetic protein PdxA STH_RS11200 PF00872 Transposase, Mutator family STH_RS11225 PF00005 ABC transporter STH_RS11275 PF01555 DNA methylase STH_RS11275 PF18755 Restriction Enzyme Adenine Methylase Associated STH_RS11285 PF00872 Transposase, Mutator family STH_RS11295 PF09299 Mu transposase, C-terminal STH_RS11295 PF00665 Integrase core domain STH_RS11300 PF01471 Putative peptidoglycan binding domain STH_RS11300 PF13401 AAA domain STH_RS11325 PF14480 DNA polymerase III polC-type N-terminus I STH_RS11325 PF11490 DNA polymerase III polC-type N-terminus II STH_RS11325 PF07733 Bacterial DNA polymerase III alpha NTPase domain STH_RS11325 PF17657 Bacterial DNA polymerase III alpha subunit finger domain STH_RS11325 PF14579 Helix-hairpin-helix motif STH_RS11325 PF02811 PHP domain STH_RS11325 PF01336 OB-fold nucleic acid binding domain STH_RS11325 PF00929 Exonuclease STH_RS11360 PF00872 Transposase, Mutator family STH_RS11370 PF01386 Ribosomal L25p family STH_RS11370 PF14693 Ribosomal protein TL5, C-terminal domain STH_RS11390 PF00665 Integrase core domain STH_RS11395 PF01695 IstB-like ATP binding protein STH_RS11405 PF00872 Transposase, Mutator family STH_RS11425 PF09369 Domain of unknown function (DUF1998) STH_RS11425 PF00270 DEAD/DEAH box helicase STH_RS11425 PF00271 Helicase conserved C-terminal domain STH_RS11430 PF01386 Ribosomal L25p family STH_RS11430 PF14693 Ribosomal protein TL5, C-terminal domain STH_RS11445 PF04143 Sulphur transport STH_RS11450 PF00455 DeoR C terminal sensor domain STH_RS11450 PF08220 DeoR-like helix-turn-helix domain STH_RS11455 PF17042 Nucleotide-binding C-terminal domain STH_RS11455 PF07005 Sugar-binding N-terminal domain STH_RS11460 PF04166 Pyridoxal phosphate biosynthetic protein PdxA STH_RS11465 PF02447 GntP family permease STH_RS11485 PF01202 Shikimate kinase STH_RS11500 PF03611 PTS system sugar-specific permease component STH_RS11505 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit STH_RS11510 PF02779 Transketolase, pyrimidine binding domain STH_RS11510 PF02780 Transketolase, C-terminal domain STH_RS11515 PF00456 Transketolase, thiamine diphosphate binding domain STH_RS11520 PF00874 PRD domain STH_RS11520 PF08279 HTH domain STH_RS11520 PF05043 Mga helix-turn-helix domain STH_RS11520 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 STH_RS11525 PF00528 Binding-protein-dependent transport system inner membrane component STH_RS11525 PF12911 N-terminal TM domain of oligopeptide transport permease C STH_RS11530 PF00528 Binding-protein-dependent transport system inner membrane component STH_RS11535 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle STH_RS11570 PF00501 AMP-binding enzyme STH_RS11570 PF16177 Acetyl-coenzyme A synthetase N-terminus STH_RS11570 PF13193 AMP-binding enzyme C-terminal domain STH_RS11575 PF00474 Sodium:solute symporter family STH_RS11590 PF12706 Beta-lactamase superfamily domain STH_RS11595 PF07722 Peptidase C26 STH_RS11610 PF02915 Rubrerythrin STH_RS11620 PF12800 4Fe-4S binding domain STH_RS11620 PF13247 4Fe-4S dicluster domain STH_RS11625 PF04879 Molybdopterin oxidoreductase Fe4S4 domain STH_RS11625 PF00384 Molybdopterin oxidoreductase STH_RS11625 PF01568 Molydopterin dinucleotide binding domain STH_RS11640 PF06463 Molybdenum Cofactor Synthesis C STH_RS11640 PF04055 Radical SAM superfamily STH_RS11650 PF02502 Ribose/Galactose Isomerase STH_RS11655 PF00834 Ribulose-phosphate 3 epimerase family STH_RS11660 PF00480 ROK family STH_RS11665 PF02653 Branched-chain amino acid transport system / permease component STH_RS11670 PF00005 ABC transporter STH_RS11675 PF13407 Periplasmic binding protein domain STH_RS11680 PF00356 Bacterial regulatory proteins, lacI family STH_RS11685 PF00180 Isocitrate/isopropylmalate dehydrogenase STH_RS11705 PF07702 UTRA domain STH_RS11705 PF00392 Bacterial regulatory proteins, gntR family STH_RS11710 PF00793 DAHP synthetase I family STH_RS11710 PF01817 Chorismate mutase type II STH_RS11715 PF01522 Polysaccharide deacetylase STH_RS11715 PF14883 Hypothetical glycosyl hydrolase family 13 STH_RS11725 PF01966 HD domain STH_RS11735 PF00072 Response regulator receiver domain STH_RS11735 PF00196 Bacterial regulatory proteins, luxR family STH_RS11745 PF06745 KaiC STH_RS11755 PF02771 Acyl-CoA dehydrogenase, N-terminal domain STH_RS11755 PF02770 Acyl-CoA dehydrogenase, middle domain STH_RS11755 PF08028 Acyl-CoA dehydrogenase, C-terminal domain STH_RS11760 PF00005 ABC transporter STH_RS11765 PF00005 ABC transporter STH_RS11765 PF12399 Branched-chain amino acid ATP-binding cassette transporter STH_RS11770 PF02653 Branched-chain amino acid transport system / permease component STH_RS11775 PF13458 Periplasmic binding protein STH_RS11780 PF01053 Cys/Met metabolism PLP-dependent enzyme STH_RS11785 PF01053 Cys/Met metabolism PLP-dependent enzyme STH_RS11800 PF00293 NUDIX domain STH_RS11805 PF13419 Haloacid dehalogenase-like hydrolase STH_RS11810 PF12697 Alpha/beta hydrolase family STH_RS11815 PF13847 Methyltransferase domain STH_RS11820 PF01022 Bacterial regulatory protein, arsR family STH_RS11840 PF07943 Penicillin-binding protein 5, C-terminal domain STH_RS11840 PF00768 D-alanyl-D-alanine carboxypeptidase STH_RS11890 PF01594 AI-2E family transporter STH_RS11915 PF00266 Aminotransferase class-V STH_RS11920 PF02082 Transcriptional regulator STH_RS11925 PF03717 Penicillin-binding Protein dimerisation domain STH_RS11925 PF03793 PASTA domain STH_RS11925 PF00905 Penicillin binding protein transpeptidase domain STH_RS11935 PF00582 Universal stress protein family STH_RS11940 PF06491 Disulphide isomerase STH_RS11955 PF00512 His Kinase A (phospho-acceptor) domain STH_RS11955 PF18698 Histidine kinase sensor domain STH_RS11955 PF00672 HAMP domain STH_RS11955 PF00989 PAS fold STH_RS11955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase STH_RS11960 PF00072 Response regulator receiver domain STH_RS11970 PF12002 MgsA AAA+ ATPase C terminal STH_RS11970 PF00004 ATPase family associated with various cellular activities (AAA) STH_RS11970 PF16193 AAA C-terminal domain STH_RS11975 PF01170 Putative RNA methylase family UPF0020 STH_RS11975 PF02926 THUMP domain STH_RS11980 PF01212 Beta-eliminating lyase STH_RS11985 PF00085 Thioredoxin STH_RS12010 PF03033 Glycosyltransferase family 28 N-terminal domain STH_RS12025 PF03033 Glycosyltransferase family 28 N-terminal domain STH_RS12025 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase STH_RS12030 PF00141 Peroxidase STH_RS12040 PF00583 Acetyltransferase (GNAT) family STH_RS12045 PF00583 Acetyltransferase (GNAT) family STH_RS12050 PF02938 GAD domain STH_RS12050 PF01336 OB-fold nucleic acid binding domain STH_RS12050 PF00152 tRNA synthetases class II (D, K and N) STH_RS12055 PF13393 Histidyl-tRNA synthetase STH_RS12055 PF03129 Anticodon binding domain STH_RS12060 PF03575 Peptidase family S51 STH_RS12065 PF00781 Diacylglycerol kinase catalytic domain STH_RS12070 PF04055 Radical SAM superfamily STH_RS12080 PF01047 MarR family STH_RS12085 PF00753 Metallo-beta-lactamase superfamily STH_RS12095 PF02580 D-Tyr-tRNA(Tyr) deacylase STH_RS12120 PF08439 Oligopeptidase F STH_RS12120 PF01432 Peptidase family M3 STH_RS12130 PF02824 TGS domain STH_RS12130 PF13291 ACT domain STH_RS12130 PF04607 Region found in RelA / SpoT proteins STH_RS12135 PF00156 Phosphoribosyl transferase domain STH_RS12140 PF17768 RecJ OB domain STH_RS12140 PF02272 DHHA1 domain STH_RS12140 PF10141 Single-strand DNA-specific exonuclease, C terminal domain STH_RS12140 PF01368 DHH family STH_RS12150 PF17863 AAA lid domain STH_RS12150 PF01078 Magnesium chelatase, subunit ChlI STH_RS12155 PF07549 SecD/SecF GG Motif STH_RS12155 PF02355 Protein export membrane protein STH_RS12160 PF02355 Protein export membrane protein STH_RS12160 PF07549 SecD/SecF GG Motif STH_RS12170 PF10502 Signal peptidase, peptidase S26 STH_RS12185 PF00367 phosphotransferase system, EIIB STH_RS12185 PF02378 Phosphotransferase system, EIIC STH_RS12195 PF11975 Family 4 glycosyl hydrolase C-terminal domain STH_RS12195 PF02056 Family 4 glycosyl hydrolase STH_RS12205 PF03323 Bacillus/Clostridium GerA spore germination protein STH_RS12220 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 STH_RS12220 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) STH_RS12225 PF02416 mttA/Hcf106 family STH_RS12230 PF03009 Glycerophosphoryl diester phosphodiesterase family STH_RS12235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family STH_RS12235 PF03466 LysR substrate binding domain STH_RS12240 PF00293 NUDIX domain STH_RS12250 PF02771 Acyl-CoA dehydrogenase, N-terminal domain STH_RS12250 PF00441 Acyl-CoA dehydrogenase, C-terminal domain STH_RS12250 PF02770 Acyl-CoA dehydrogenase, middle domain STH_RS12260 PF01642 Methylmalonyl-CoA mutase STH_RS12260 PF02310 B12 binding domain STH_RS12265 PF01642 Methylmalonyl-CoA mutase STH_RS12265 PF02310 B12 binding domain STH_RS12330 PF02770 Acyl-CoA dehydrogenase, middle domain STH_RS12330 PF08028 Acyl-CoA dehydrogenase, C-terminal domain STH_RS12330 PF02771 Acyl-CoA dehydrogenase, N-terminal domain STH_RS12335 PF01895 PhoU domain STH_RS12350 PF01883 Iron-sulfur cluster assembly protein STH_RS12365 PF05138 Phenylacetic acid catabolic protein STH_RS12370 PF17932 Tetracyclin repressor-like, C-terminal domain STH_RS12370 PF00440 Bacterial regulatory proteins, tetR family STH_RS12380 PF02447 GntP family permease STH_RS12385 PF02595 Glycerate kinase family STH_RS12390 PF13556 PucR C-terminal helix-turn-helix domain STH_RS12390 PF05651 Putative sugar diacid recognition STH_RS12390 PF17853 GGDEF-like domain STH_RS12410 PF02673 Bacitracin resistance protein BacA STH_RS12415 PF00580 UvrD/REP helicase N-terminal domain STH_RS12415 PF13361 UvrD-like helicase C-terminal domain STH_RS12425 PF01915 Glycosyl hydrolase family 3 C-terminal domain STH_RS12425 PF00933 Glycosyl hydrolase family 3 N terminal domain STH_RS12430 PF00111 2Fe-2S iron-sulfur cluster binding domain STH_RS12430 PF00175 Oxidoreductase NAD-binding domain STH_RS12435 PF02965 Vitamin B12 dependent methionine synthase, activation domain STH_RS12435 PF02607 B12 binding domain STH_RS12435 PF02310 B12 binding domain STH_RS12435 PF00809 Pterin binding enzyme STH_RS12435 PF02574 Homocysteine S-methyltransferase STH_RS12445 PF02219 Methylenetetrahydrofolate reductase STH_RS12445 PF02574 Homocysteine S-methyltransferase STH_RS12450 PF01551 Peptidase family M23 STH_RS12450 PF08525 Opacity-associated protein A N-terminal motif STH_RS12450 PF01476 LysM domain STH_RS12460 PF00512 His Kinase A (phospho-acceptor) domain STH_RS12460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase STH_RS12465 PF00486 Transcriptional regulatory protein, C terminal STH_RS12465 PF00072 Response regulator receiver domain STH_RS12475 PF00248 Aldo/keto reductase family STH_RS12500 PF07992 Pyridine nucleotide-disulphide oxidoreductase STH_RS12510 PF01209 ubiE/COQ5 methyltransferase family STH_RS12515 PF00528 Binding-protein-dependent transport system inner membrane component STH_RS12520 PF00005 ABC transporter STH_RS12545 PF03746 LamB/YcsF family STH_RS12560 PF01555 DNA methylase STH_RS12565 PF06130 Phosphate propanoyltransferase STH_RS12575 PF04542 Sigma-70 region 2 STH_RS12575 PF08281 Sigma-70, region 4 STH_RS12595 PF00549 CoA-ligase STH_RS12595 PF02629 CoA binding domain STH_RS12600 PF08442 ATP-grasp domain STH_RS12600 PF00549 CoA-ligase STH_RS12605 PF00390 Malic enzyme, N-terminal domain STH_RS12605 PF03949 Malic enzyme, NAD binding domain STH_RS12615 PF05681 Fumarate hydratase (Fumerase) STH_RS12625 PF09339 IclR helix-turn-helix domain STH_RS12625 PF01614 Bacterial transcriptional regulator STH_RS12630 PF00171 Aldehyde dehydrogenase family STH_RS12635 PF00696 Amino acid kinase family STH_RS12640 PF00004 ATPase family associated with various cellular activities (AAA) STH_RS12640 PF01434 Peptidase family M41 STH_RS12640 PF17862 AAA+ lid domain STH_RS12645 PF00285 Citrate synthase, C-terminal domain STH_RS12650 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain STH_RS12650 PF00056 lactate/malate dehydrogenase, NAD binding domain STH_RS12655 PF00180 Isocitrate/isopropylmalate dehydrogenase STH_RS12685 PF02583 Metal-sensitive transcriptional repressor STH_RS12690 PF07187 Protein of unknown function (DUF1405) STH_RS12695 PF00578 AhpC/TSA family STH_RS12700 PF17863 AAA lid domain STH_RS12700 PF07726 ATPase family associated with various cellular activities (AAA) STH_RS12710 PF11992 Domain of unknown function (DUF3488) STH_RS12710 PF13559 Domain of unknown function (DUF4129) STH_RS12710 PF01841 Transglutaminase-like superfamily STH_RS12715 PF00288 GHMP kinases N terminal domain STH_RS12715 PF08544 GHMP kinases C terminal STH_RS12720 PF00291 Pyridoxal-phosphate dependent enzyme STH_RS12725 PF02824 TGS domain STH_RS12725 PF03129 Anticodon binding domain STH_RS12725 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) STH_RS12725 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain STH_RS12730 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) STH_RS12745 PF03030 Inorganic H+ pyrophosphatase STH_RS12785 PF11588 Protein of unknown function (DUF3243) STH_RS12790 PF03060 Nitronate monooxygenase STH_RS12805 PF02811 PHP domain STH_RS12810 PF00557 Metallopeptidase family M24 STH_RS12820 PF00005 ABC transporter STH_RS12820 PF00664 ABC transporter transmembrane region STH_RS12860 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain STH_RS12860 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain STH_RS12865 PF00871 Acetokinase family STH_RS12875 PF00768 D-alanyl-D-alanine carboxypeptidase STH_RS12875 PF07943 Penicillin-binding protein 5, C-terminal domain STH_RS12885 PF10079 Bacillithiol biosynthesis BshC STH_RS12890 PF02769 AIR synthase related protein, C-terminal domain STH_RS12890 PF00586 AIR synthase related protein, N-terminal domain STH_RS12895 PF03841 L-seryl-tRNA selenium transferase STH_RS12895 PF12390 Selenocysteine synthase N terminal STH_RS12905 PF01510 N-acetylmuramoyl-L-alanine amidase STH_RS12905 PF01471 Putative peptidoglycan binding domain STH_RS12915 PF07690 Major Facilitator Superfamily STH_RS12925 PF02634 FdhD/NarQ family STH_RS12935 PF03916 Polysulphide reductase, NrfD STH_RS12940 PF13247 4Fe-4S dicluster domain STH_RS12945 PF04879 Molybdopterin oxidoreductase Fe4S4 domain STH_RS12945 PF01568 Molydopterin dinucleotide binding domain STH_RS12945 PF00384 Molybdopterin oxidoreductase STH_RS12950 PF00384 Molybdopterin oxidoreductase STH_RS12950 PF01568 Molydopterin dinucleotide binding domain STH_RS12950 PF04879 Molybdopterin oxidoreductase Fe4S4 domain STH_RS12960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family STH_RS12960 PF03466 LysR substrate binding domain STH_RS12965 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain STH_RS12965 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain STH_RS12965 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family STH_RS12985 PF00005 ABC transporter STH_RS12985 PF13732 Domain of unknown function (DUF4162) STH_RS12995 PF12848 ABC transporter STH_RS12995 PF00005 ABC transporter STH_RS13005 PF00690 Cation transporter/ATPase, N-terminus STH_RS13005 PF00689 Cation transporting ATPase, C-terminus STH_RS13020 PF00403 Heavy-metal-associated domain STH_RS13030 PF02628 Cytochrome oxidase assembly protein STH_RS13040 PF00005 ABC transporter STH_RS13045 PF00528 Binding-protein-dependent transport system inner membrane component STH_RS13050 PF00497 Bacterial extracellular solute-binding proteins, family 3 STH_RS13055 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD STH_RS13060 PF00924 Mechanosensitive ion channel STH_RS13065 PF04069 Substrate binding domain of ABC-type glycine betaine transport system STH_RS13070 PF00528 Binding-protein-dependent transport system inner membrane component STH_RS13075 PF00528 Binding-protein-dependent transport system inner membrane component STH_RS13080 PF00571 CBS domain STH_RS13080 PF00005 ABC transporter STH_RS13090 PF02687 FtsX-like permease family STH_RS13090 PF02687 FtsX-like permease family STH_RS13095 PF00005 ABC transporter STH_RS13100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase STH_RS13100 PF07730 Histidine kinase STH_RS13105 PF00072 Response regulator receiver domain STH_RS13105 PF00196 Bacterial regulatory proteins, luxR family STH_RS13110 PF00939 Sodium:sulfate symporter transmembrane region STH_RS13115 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit STH_RS13120 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit STH_RS13125 PF02910 Fumarate reductase flavoprotein C-term STH_RS13125 PF00890 FAD binding domain STH_RS13130 PF13085 2Fe-2S iron-sulfur cluster binding domain STH_RS13135 PF05681 Fumarate hydratase (Fumerase) STH_RS13145 PF02679 (2R)-phospho-3-sulfolactate synthase (ComA) STH_RS13165 PF07690 Major Facilitator Superfamily STH_RS13170 PF04284 Protein of unknown function (DUF441) STH_RS13185 PF01266 FAD dependent oxidoreductase STH_RS13190 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle STH_RS13195 PF00528 Binding-protein-dependent transport system inner membrane component STH_RS13200 PF00528 Binding-protein-dependent transport system inner membrane component STH_RS13200 PF12911 N-terminal TM domain of oligopeptide transport permease C STH_RS13215 PF00958 GMP synthase C terminal domain STH_RS13215 PF03352 Methyladenine glycosylase STH_RS13215 PF00117 Glutamine amidotransferase class-I STH_RS13215 PF13302 Acetyltransferase (GNAT) domain STH_RS13215 PF13673 Acetyltransferase (GNAT) domain STH_RS13225 PF00491 Arginase family STH_RS13230 PF09587 Bacterial capsule synthesis protein PGA_cap STH_RS13240 PF00005 ABC transporter STH_RS13255 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD STH_RS13260 PF00749 tRNA synthetases class I (E and Q), catalytic domain STH_RS13270 PF00176 SNF2 family N-terminal domain STH_RS13270 PF00271 Helicase conserved C-terminal domain STH_RS13295 PF05343 M42 glutamyl aminopeptidase STH_RS13300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family STH_RS13300 PF03466 LysR substrate binding domain STH_RS13305 PF04542 Sigma-70 region 2 STH_RS13305 PF08281 Sigma-70, region 4 STH_RS13315 PF00476 DNA polymerase family A STH_RS13315 PF01367 5'-3' exonuclease, C-terminal SAM fold STH_RS13315 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain STH_RS13320 PF13380 CoA binding domain STH_RS13325 PF01053 Cys/Met metabolism PLP-dependent enzyme STH_RS13330 PF00294 pfkB family carbohydrate kinase STH_RS13335 PF01116 Fructose-bisphosphate aldolase class-II STH_RS13340 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain STH_RS13340 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain STH_RS13340 PF00205 Thiamine pyrophosphate enzyme, central domain STH_RS13345 PF00920 Dehydratase family STH_RS13350 PF01063 Amino-transferase class IV STH_RS13355 PF00682 HMGL-like STH_RS13355 PF08502 LeuA allosteric (dimerisation) domain STH_RS13360 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain STH_RS13360 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain STH_RS13365 PF01842 ACT domain STH_RS13365 PF10369 Small subunit of acetolactate synthase STH_RS13370 PF00072 Response regulator receiver domain STH_RS13370 PF01966 HD domain STH_RS13375 PF00072 Response regulator receiver domain STH_RS13375 PF00486 Transcriptional regulatory protein, C terminal STH_RS13380 PF00800 Prephenate dehydratase STH_RS13380 PF01817 Chorismate mutase type II STH_RS13380 PF01842 ACT domain STH_RS13385 PF01047 MarR family STH_RS13395 PF07690 Major Facilitator Superfamily STH_RS13405 PF01408 Oxidoreductase family, NAD-binding Rossmann fold STH_RS13405 PF02894 Oxidoreductase family, C-terminal alpha/beta domain STH_RS13410 PF01695 IstB-like ATP binding protein STH_RS13415 PF00665 Integrase core domain STH_RS13420 PF00665 Integrase core domain STH_RS13425 PF01695 IstB-like ATP binding protein STH_RS13430 PF00872 Transposase, Mutator family STH_RS13445 PF00534 Glycosyl transferases group 1 STH_RS13450 PF00483 Nucleotidyl transferase STH_RS13465 PF01471 Putative peptidoglycan binding domain STH_RS13465 PF13401 AAA domain STH_RS13470 PF09299 Mu transposase, C-terminal STH_RS13470 PF00665 Integrase core domain STH_RS13480 PF00664 ABC transporter transmembrane region STH_RS13480 PF00005 ABC transporter STH_RS13485 PF00664 ABC transporter transmembrane region STH_RS13485 PF00005 ABC transporter STH_RS13495 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) STH_RS13505 PF00072 Response regulator receiver domain STH_RS13505 PF00196 Bacterial regulatory proteins, luxR family STH_RS13510 PF00672 HAMP domain STH_RS13510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase STH_RS13510 PF07730 Histidine kinase STH_RS13520 PF02875 Mur ligase family, glutamate ligase domain STH_RS13520 PF08245 Mur ligase middle domain STH_RS13520 PF01225 Mur ligase family, catalytic domain STH_RS13525 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) STH_RS13535 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II STH_RS13535 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III STH_RS13535 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I STH_RS13535 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain STH_RS13550 PF03009 Glycerophosphoryl diester phosphodiesterase family STH_RS13555 PF01810 LysE type translocator STH_RS13560 PF01842 ACT domain STH_RS13560 PF00742 Homoserine dehydrogenase STH_RS13560 PF03447 Homoserine dehydrogenase, NAD binding domain STH_RS13565 PF13307 Helicase C-terminal domain STH_RS13570 PF00171 Aldehyde dehydrogenase family STH_RS13660 PF12911 N-terminal TM domain of oligopeptide transport permease C STH_RS13660 PF00528 Binding-protein-dependent transport system inner membrane component STH_RS13665 PF00528 Binding-protein-dependent transport system inner membrane component STH_RS13670 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle STH_RS13690 PF14698 Argininosuccinate lyase C-terminal STH_RS13690 PF00206 Lyase STH_RS13695 PF00528 Binding-protein-dependent transport system inner membrane component STH_RS13700 PF08402 TOBE domain STH_RS13700 PF00005 ABC transporter STH_RS13705 PF00480 ROK family STH_RS13705 PF01325 Iron dependent repressor, N-terminal DNA binding domain STH_RS13710 PF00392 Bacterial regulatory proteins, gntR family STH_RS13710 PF00155 Aminotransferase class I and II STH_RS13735 PF03477 ATP cone domain STH_RS13735 PF02867 Ribonucleotide reductase, barrel domain STH_RS13735 PF00317 Ribonucleotide reductase, all-alpha domain STH_RS13740 PF03477 ATP cone domain STH_RS13745 PF02146 Sir2 family STH_RS13765 PF02272 DHHA1 domain STH_RS13765 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain STH_RS13765 PF01411 tRNA synthetases class II (A) STH_RS13770 PF00361 Proton-conducting membrane transporter STH_RS13775 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus STH_RS13775 PF00361 Proton-conducting membrane transporter STH_RS13780 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus STH_RS13780 PF00361 Proton-conducting membrane transporter STH_RS13780 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus STH_RS13785 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L STH_RS13790 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 STH_RS13800 PF00146 NADH dehydrogenase STH_RS13805 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit STH_RS13810 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit STH_RS13815 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 STH_RS13820 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit STH_RS13840 PF01053 Cys/Met metabolism PLP-dependent enzyme STH_RS13855 PF00561 alpha/beta hydrolase fold STH_RS13860 PF00730 HhH-GPD superfamily base excision DNA repair protein STH_RS13860 PF10576 Iron-sulfur binding domain of endonuclease III STH_RS13860 PF00633 Helix-hairpin-helix motif STH_RS13875 PF00202 Aminotransferase class-III STH_RS13885 PF01343 Peptidase family S49 STH_RS13900 PF04542 Sigma-70 region 2 STH_RS13900 PF08281 Sigma-70, region 4 STH_RS13910 PF12146 Serine aminopeptidase, S33 STH_RS13920 PF01408 Oxidoreductase family, NAD-binding Rossmann fold STH_RS13950 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain STH_RS13950 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase STH_RS13960 PF07883 Cupin domain STH_RS13965 PF17676 LD-carboxypeptidase C-terminal domain STH_RS13965 PF02016 LD-carboxypeptidase N-terminal domain STH_RS13975 PF01209 ubiE/COQ5 methyltransferase family STH_RS13985 PF13538 UvrD-like helicase C-terminal domain STH_RS13990 PF09334 tRNA synthetases class I (M) STH_RS13990 PF08264 Anticodon-binding domain of tRNA STH_RS14010 PF00535 Glycosyl transferase family 2 STH_RS14015 PF05958 tRNA (Uracil-5-)-methyltransferase STH_RS14015 PF01938 TRAM domain STH_RS14020 PF01370 NAD dependent epimerase/dehydratase family STH_RS14025 PF02637 GatB domain STH_RS14025 PF02934 GatB/GatE catalytic domain STH_RS14030 PF01425 Amidase STH_RS14035 PF02686 Glu-tRNAGln amidotransferase C subunit STH_RS14040 PF08352 Oligopeptide/dipeptide transporter, C-terminal region STH_RS14040 PF00005 ABC transporter STH_RS14045 PF00005 ABC transporter STH_RS14045 PF08352 Oligopeptide/dipeptide transporter, C-terminal region STH_RS14050 PF00533 BRCA1 C Terminus (BRCT) domain STH_RS14050 PF01653 NAD-dependent DNA ligase adenylation domain STH_RS14050 PF03120 NAD-dependent DNA ligase OB-fold domain STH_RS14050 PF03119 NAD-dependent DNA ligase C4 zinc finger domain STH_RS14050 PF12826 Helix-hairpin-helix motif STH_RS14055 PF13361 UvrD-like helicase C-terminal domain STH_RS14055 PF00580 UvrD/REP helicase N-terminal domain STH_RS14085 PF00207 Alpha-2-macroglobulin family STH_RS14085 PF01835 MG2 domain STH_RS14085 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain STH_RS14085 PF07703 Alpha-2-macroglobulin bait region domain STH_RS14090 PF00155 Aminotransferase class I and II STH_RS14095 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase STH_RS14095 PF01502 Phosphoribosyl-AMP cyclohydrolase STH_RS14100 PF00977 Histidine biosynthesis protein STH_RS14105 PF00977 Histidine biosynthesis protein STH_RS14110 PF00117 Glutamine amidotransferase class-I STH_RS14115 PF00475 Imidazoleglycerol-phosphate dehydratase STH_RS14120 PF00815 Histidinol dehydrogenase STH_RS14125 PF01634 ATP phosphoribosyltransferase STH_RS14130 PF13393 Histidyl-tRNA synthetase STH_RS14135 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) STH_RS14140 PF02080 TrkA-C domain STH_RS14140 PF02254 TrkA-N domain STH_RS14140 PF00999 Sodium/hydrogen exchanger family STH_RS14145 PF01212 Beta-eliminating lyase STH_RS14155 PF01371 Trp repressor protein STH_RS14170 PF08386 TAP-like protein STH_RS14170 PF00561 alpha/beta hydrolase fold STH_RS14175 PF00563 EAL domain STH_RS14175 PF00990 Diguanylate cyclase, GGDEF domain STH_RS14175 PF08448 PAS fold STH_RS14180 PF02843 Phosphoribosylglycinamide synthetase, C domain STH_RS14180 PF02844 Phosphoribosylglycinamide synthetase, N domain STH_RS14180 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain STH_RS14185 PF02142 MGS-like domain STH_RS14185 PF01808 AICARFT/IMPCHase bienzyme STH_RS14190 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain STH_RS14190 PF00293 NUDIX domain STH_RS14190 PF09297 NADH pyrophosphatase zinc ribbon domain STH_RS14195 PF00551 Formyl transferase STH_RS14200 PF00586 AIR synthase related protein, N-terminal domain STH_RS14200 PF02769 AIR synthase related protein, C-terminal domain STH_RS14205 PF00156 Phosphoribosyl transferase domain STH_RS14210 PF02769 AIR synthase related protein, C-terminal domain STH_RS14210 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain STH_RS14210 PF00586 AIR synthase related protein, N-terminal domain STH_RS14220 PF01259 SAICAR synthetase STH_RS14230 PF00206 Lyase STH_RS14230 PF10397 Adenylosuccinate lyase C-terminus STH_RS14235 PF00860 Permease family STH_RS14240 PF08543 Phosphomethylpyrimidine kinase STH_RS14255 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III STH_RS14260 PF07355 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) STH_RS14265 PF07355 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) STH_RS14270 PF04723 Glycine reductase complex selenoprotein A STH_RS14275 PF09338 Glycine/sarcosine/betaine reductase component B subunits STH_RS14280 PF00085 Thioredoxin STH_RS14285 PF07992 Pyridine nucleotide-disulphide oxidoreductase STH_RS14295 PF00764 Arginosuccinate synthase STH_RS14320 PF01145 SPFH domain / Band 7 family STH_RS14320 PF15975 Flotillin STH_RS14330 PF00202 Aminotransferase class-III STH_RS14335 PF00696 Amino acid kinase family STH_RS14350 PF00158 Sigma-54 interaction domain STH_RS14350 PF01590 GAF domain STH_RS14350 PF02954 Bacterial regulatory protein, Fis family STH_RS14355 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 STH_RS14355 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain STH_RS14370 PF00990 Diguanylate cyclase, GGDEF domain STH_RS14370 PF07694 5TMR of 5TMR-LYT STH_RS14375 PF01960 ArgJ family STH_RS14380 PF00583 Acetyltransferase (GNAT) family STH_RS14385 PF02774 Semialdehyde dehydrogenase, dimerisation domain STH_RS14385 PF01118 Semialdehyde dehydrogenase, NAD binding domain STH_RS14405 PF13419 Haloacid dehalogenase-like hydrolase STH_RS14410 PF00118 TCP-1/cpn60 chaperonin family STH_RS14415 PF00166 Chaperonin 10 Kd subunit STH_RS14420 PF14791 DNA polymerase beta thumb STH_RS14420 PF14716 Helix-hairpin-helix domain STH_RS14420 PF02811 PHP domain STH_RS14440 PF01967 MoaC family STH_RS14445 PF04055 Radical SAM superfamily STH_RS14445 PF06463 Molybdenum Cofactor Synthesis C STH_RS14450 PF03453 MoeA N-terminal region (domain I and II) STH_RS14450 PF00994 Probable molybdopterin binding domain STH_RS14450 PF03454 MoeA C-terminal region (domain IV) STH_RS14455 PF00994 Probable molybdopterin binding domain STH_RS14455 PF03454 MoeA C-terminal region (domain IV) STH_RS14455 PF03453 MoeA N-terminal region (domain I and II) STH_RS14480 PF13977 BetI-type transcriptional repressor, C-terminal STH_RS14480 PF00440 Bacterial regulatory proteins, tetR family STH_RS14485 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain STH_RS14485 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain STH_RS14490 PF00108 Thiolase, N-terminal domain STH_RS14490 PF02803 Thiolase, C-terminal domain STH_RS14495 PF01098 Cell cycle protein STH_RS14500 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) STH_RS14505 PF00571 CBS domain STH_RS14505 PF00478 IMP dehydrogenase / GMP reductase domain STH_RS14510 PF03167 Uracil DNA glycosylase superfamily STH_RS14515 PF01225 Mur ligase family, catalytic domain STH_RS14515 PF02875 Mur ligase family, glutamate ligase domain STH_RS14515 PF08245 Mur ligase middle domain STH_RS14520 PF01569 PAP2 superfamily STH_RS14525 PF14602 Hexapeptide repeat of succinyl-transferase STH_RS14530 PF00814 Glycoprotease family STH_RS14535 PF00075 RNase H STH_RS14540 PF00583 Acetyltransferase (GNAT) family STH_RS14545 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) STH_RS14550 PF00814 Glycoprotease family STH_RS14555 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE STH_RS14565 PF17674 HHH domain STH_RS14565 PF00575 S1 RNA binding domain STH_RS14565 PF16921 Tex protein YqgF-like domain STH_RS14565 PF09371 Tex-like protein N-terminal domain STH_RS14585 PF00269 Small, acid-soluble spore proteins, alpha/beta type STH_RS14590 PF07722 Peptidase C26 STH_RS14595 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system STH_RS14605 PF01168 Alanine racemase, N-terminal domain STH_RS14605 PF00842 Alanine racemase, C-terminal domain STH_RS14610 PF01256 Carbohydrate kinase STH_RS14610 PF03853 YjeF-related protein N-terminus STH_RS14615 PF01648 4'-phosphopantetheinyl transferase superfamily STH_RS14635 PF03576 Peptidase family S58 STH_RS14640 PF05698 Bacterial trigger factor protein (TF) C-terminus STH_RS14645 PF01883 Iron-sulfur cluster assembly protein STH_RS14660 PF13545 Crp-like helix-turn-helix domain STH_RS14660 PF00027 Cyclic nucleotide-binding domain STH_RS14665 PF06071 Protein of unknown function (DUF933) STH_RS14665 PF01926 50S ribosome-binding GTPase STH_RS14675 PF04264 YceI-like domain STH_RS14680 PF01557 Fumarylacetoacetate (FAA) hydrolase family STH_RS14690 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) STH_RS14705 PF09515 Thiamine transporter protein (Thia_YuaJ) STH_RS14710 PF07486 Cell Wall Hydrolase STH_RS14710 PF01471 Putative peptidoglycan binding domain STH_RS14715 PF14620 YpeB sporulation STH_RS14715 PF03413 Peptidase propeptide and YPEB domain STH_RS14725 PF08281 Sigma-70, region 4 STH_RS14725 PF04542 Sigma-70 region 2 STH_RS14730 PF01381 Helix-turn-helix STH_RS14730 PF13521 AAA domain STH_RS14735 PF01545 Cation efflux family STH_RS14735 PF16916 Dimerisation domain of Zinc Transporter STH_RS14740 PF08534 Redoxin STH_RS14745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain STH_RS14745 PF00672 HAMP domain STH_RS14745 PF12729 Four helix bundle sensory module for signal transduction STH_RS14755 PF13361 UvrD-like helicase C-terminal domain STH_RS14755 PF00580 UvrD/REP helicase N-terminal domain STH_RS14775 PF00691 OmpA family STH_RS14775 PF13677 Membrane MotB of proton-channel complex MotA/MotB STH_RS14780 PF01618 MotA/TolQ/ExbB proton channel family STH_RS14785 PF00669 Bacterial flagellin N-terminal helical region STH_RS14785 PF00700 Bacterial flagellin C-terminal helical region STH_RS14795 PF02561 Flagellar protein FliS STH_RS14800 PF02465 Flagellar hook-associated protein 2 N-terminus STH_RS14800 PF07196 Flagellin hook IN motif STH_RS14800 PF07195 Flagellar hook-associated protein 2 C-terminus STH_RS14805 PF03646 FlaG protein STH_RS14815 PF00460 Flagella basal body rod protein STH_RS14815 PF06429 Flagellar basal body rod FlgEFG protein C-terminal STH_RS14835 PF04545 Sigma-70, region 4 STH_RS14835 PF04539 Sigma-70 region 3 STH_RS14835 PF04542 Sigma-70 region 2 STH_RS14840 PF10609 NUBPL iron-transfer P-loop NTPase STH_RS14845 PF00448 SRP54-type protein, GTPase domain STH_RS14845 PF00448 SRP54-type protein, GTPase domain STH_RS14850 PF00771 FHIPEP family STH_RS14855 PF01312 FlhB HrpN YscU SpaS Family STH_RS14865 PF01313 Bacterial export proteins, family 3 STH_RS14870 PF00813 FliP family STH_RS14880 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term STH_RS14890 PF00460 Flagella basal body rod protein STH_RS14890 PF07559 Flagellar basal body protein FlaE STH_RS14890 PF06429 Flagellar basal body rod FlgEFG protein C-terminal STH_RS14895 PF03963 Flagellar hook capping protein - N-terminal region STH_RS14915 PF18269 T3SS EscN ATPase C-terminal domain STH_RS14915 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain STH_RS14915 PF02874 ATP synthase alpha/beta family, beta-barrel domain STH_RS14925 PF01706 FliG C-terminal domain STH_RS14925 PF14842 FliG N-terminal domain STH_RS14925 PF14841 FliG middle domain STH_RS14930 PF08345 Flagellar M-ring protein C-terminal STH_RS14930 PF01514 Secretory protein of YscJ/FliF family STH_RS14935 PF02049 Flagellar hook-basal body complex protein FliE STH_RS14940 PF06429 Flagellar basal body rod FlgEFG protein C-terminal STH_RS14940 PF00460 Flagella basal body rod protein STH_RS14945 PF00460 Flagella basal body rod protein STH_RS14950 PF06429 Flagellar basal body rod FlgEFG protein C-terminal STH_RS14950 PF00460 Flagella basal body rod protein STH_RS14960 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term STH_RS14960 PF02154 Flagellar motor switch protein FliM STH_RS14965 PF02770 Acyl-CoA dehydrogenase, middle domain STH_RS14965 PF02771 Acyl-CoA dehydrogenase, N-terminal domain STH_RS14965 PF00441 Acyl-CoA dehydrogenase, C-terminal domain STH_RS14970 PF02803 Thiolase, C-terminal domain STH_RS14970 PF00108 Thiolase, N-terminal domain STH_RS14975 PF00378 Enoyl-CoA hydratase/isomerase STH_RS14975 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain STH_RS14975 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain STH_RS14980 PF01012 Electron transfer flavoprotein domain STH_RS14980 PF00766 Electron transfer flavoprotein FAD-binding domain STH_RS14985 PF01012 Electron transfer flavoprotein domain STH_RS14990 PF08359 YsiA-like protein, C-terminal region STH_RS14990 PF00440 Bacterial regulatory proteins, tetR family STH_RS14995 PF00501 AMP-binding enzyme STH_RS14995 PF13193 AMP-binding enzyme C-terminal domain STH_RS15005 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain STH_RS15005 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain STH_RS15020 PF02653 Branched-chain amino acid transport system / permease component STH_RS15025 PF00005 ABC transporter STH_RS15065 PF04542 Sigma-70 region 2 STH_RS15065 PF08281 Sigma-70, region 4 STH_RS15085 PF00180 Isocitrate/isopropylmalate dehydrogenase STH_RS15100 PF00265 Thymidine kinase STH_RS15105 PF08239 Bacterial SH3 domain STH_RS15105 PF01520 N-acetylmuramoyl-L-alanine amidase STH_RS15110 PF00380 Ribosomal protein S9/S16 STH_RS15115 PF00572 Ribosomal protein L13 STH_RS15120 PF01416 tRNA pseudouridine synthase STH_RS15125 PF02361 Cobalt transport protein STH_RS15130 PF00005 ABC transporter STH_RS15135 PF00005 ABC transporter STH_RS15140 PF01196 Ribosomal protein L17 STH_RS15145 PF01000 RNA polymerase Rpb3/RpoA insert domain STH_RS15145 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain STH_RS15145 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain STH_RS15150 PF01479 S4 domain STH_RS15150 PF00163 Ribosomal protein S4/S9 N-terminal domain STH_RS15155 PF00411 Ribosomal protein S11 STH_RS15160 PF00416 Ribosomal protein S13/S18 STH_RS15165 PF00444 Ribosomal protein L36 STH_RS15170 PF01176 Translation initiation factor 1A / IF-1 STH_RS15180 PF05191 Adenylate kinase, active site lid STH_RS15185 PF00344 SecY translocase STH_RS15190 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A STH_RS15195 PF00327 Ribosomal protein L30p/L7e STH_RS15200 PF00333 Ribosomal protein S5, N-terminal domain STH_RS15200 PF03719 Ribosomal protein S5, C-terminal domain STH_RS15205 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast STH_RS15210 PF00347 Ribosomal protein L6 STH_RS15215 PF00410 Ribosomal protein S8 STH_RS15220 PF00253 Ribosomal protein S14p/S29e STH_RS15225 PF00281 Ribosomal protein L5 STH_RS15225 PF00673 ribosomal L5P family C-terminus STH_RS15230 PF00467 KOW motif STH_RS15230 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 STH_RS15235 PF00238 Ribosomal protein L14p/L23e STH_RS15240 PF00366 Ribosomal protein S17 STH_RS15245 PF00831 Ribosomal L29 protein STH_RS15250 PF00252 Ribosomal protein L16p/L10e STH_RS15255 PF00189 Ribosomal protein S3, C-terminal domain STH_RS15255 PF07650 KH domain STH_RS15260 PF00237 Ribosomal protein L22p/L17e STH_RS15265 PF00203 Ribosomal protein S19 STH_RS15270 PF03947 Ribosomal Proteins L2, C-terminal domain STH_RS15270 PF00181 Ribosomal Proteins L2, RNA binding domain STH_RS15275 PF00276 Ribosomal protein L23 STH_RS15280 PF00573 Ribosomal protein L4/L1 family STH_RS15285 PF00297 Ribosomal protein L3 STH_RS15290 PF00338 Ribosomal protein S10p/S20e STH_RS15295 PF03144 Elongation factor Tu domain 2 STH_RS15295 PF00009 Elongation factor Tu GTP binding domain STH_RS15295 PF03143 Elongation factor Tu C-terminal domain STH_RS15300 PF14492 Elongation Factor G, domain II STH_RS15300 PF03764 Elongation factor G, domain IV STH_RS15300 PF00009 Elongation factor Tu GTP binding domain STH_RS15300 PF03144 Elongation factor Tu domain 2 STH_RS15300 PF00679 Elongation factor G C-terminus STH_RS15305 PF00177 Ribosomal protein S7p/S5e STH_RS15310 PF00164 Ribosomal protein S12/S23 STH_RS15315 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family STH_RS15320 PF05175 Methyltransferase small domain STH_RS15325 PF05000 RNA polymerase Rpb1, domain 4 STH_RS15325 PF04998 RNA polymerase Rpb1, domain 5 STH_RS15325 PF04983 RNA polymerase Rpb1, domain 3 STH_RS15325 PF04997 RNA polymerase Rpb1, domain 1 STH_RS15325 PF00623 RNA polymerase Rpb1, domain 2 STH_RS15330 PF10385 RNA polymerase beta subunit external 1 domain STH_RS15330 PF04560 RNA polymerase Rpb2, domain 7 STH_RS15330 PF00562 RNA polymerase Rpb2, domain 6 STH_RS15330 PF04565 RNA polymerase Rpb2, domain 3 STH_RS15330 PF04561 RNA polymerase Rpb2, domain 2 STH_RS15330 PF04563 RNA polymerase beta subunit STH_RS15335 PF00542 Ribosomal protein L7/L12 C-terminal domain STH_RS15335 PF16320 Ribosomal protein L7/L12 dimerisation domain STH_RS15340 PF00466 Ribosomal protein L10 STH_RS15345 PF00687 Ribosomal protein L1p/L10e family STH_RS15350 PF00298 Ribosomal protein L11, RNA binding domain STH_RS15350 PF03946 Ribosomal protein L11, N-terminal domain STH_RS15355 PF00467 KOW motif STH_RS15355 PF02357 Transcription termination factor nusG STH_RS15360 PF00584 SecE/Sec61-gamma subunits of protein translocation complex STH_RS15375 PF02634 FdhD/NarQ family STH_RS15385 PF00196 Bacterial regulatory proteins, luxR family STH_RS15385 PF00072 Response regulator receiver domain STH_RS15390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase STH_RS15390 PF07730 Histidine kinase STH_RS15390 PF00672 HAMP domain STH_RS15400 PF04879 Molybdopterin oxidoreductase Fe4S4 domain STH_RS15400 PF01568 Molydopterin dinucleotide binding domain STH_RS15400 PF00384 Molybdopterin oxidoreductase STH_RS15405 PF04879 Molybdopterin oxidoreductase Fe4S4 domain STH_RS15405 PF00384 Molybdopterin oxidoreductase STH_RS15405 PF01568 Molydopterin dinucleotide binding domain STH_RS15410 PF09163 Formate dehydrogenase N, transmembrane STH_RS15410 PF13247 4Fe-4S dicluster domain STH_RS15425 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit STH_RS15425 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region STH_RS15425 PF10531 SLBB domain STH_RS15455 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) STH_RS15460 PF00583 Acetyltransferase (GNAT) family STH_RS15470 PF04542 Sigma-70 region 2 STH_RS15470 PF08281 Sigma-70, region 4 STH_RS15475 PF04294 VanW like protein STH_RS15480 PF08032 RNA 2'-O ribose methyltransferase substrate binding STH_RS15480 PF00588 SpoU rRNA Methylase family STH_RS15485 PF00186 Dihydrofolate reductase STH_RS15490 PF00303 Thymidylate synthase STH_RS15495 PF00636 Ribonuclease III domain STH_RS15500 PF01406 tRNA synthetases class I (C) catalytic domain STH_RS15500 PF09190 DALR domain STH_RS15505 PF06426 Serine acetyltransferase, N-terminal STH_RS15505 PF00132 Bacterial transferase hexapeptide (six repeats) STH_RS15510 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) STH_RS15515 PF02542 YgbB family STH_RS15520 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase STH_RS15530 PF02559 CarD-like/TRCF domain STH_RS15545 PF00633 Helix-hairpin-helix motif STH_RS15545 PF10635 DisA bacterial checkpoint controller linker region STH_RS15545 PF02457 DisA bacterial checkpoint controller nucleotide-binding STH_RS15550 PF18073 Rubredoxin metal binding domain STH_RS15555 PF00793 DAHP synthetase I family STH_RS15555 PF18152 DAHP synthase ferredoxin-like domain STH_RS15565 PF00266 Aminotransferase class-V STH_RS15575 PF02861 Clp amino terminal domain, pathogenicity island component STH_RS15575 PF10431 C-terminal, D2-small domain, of ClpB protein STH_RS15575 PF00004 ATPase family associated with various cellular activities (AAA) STH_RS15575 PF07724 AAA domain (Cdc48 subfamily) STH_RS15575 PF17871 AAA lid domain STH_RS15580 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain STH_RS15585 PF02151 UvrB/uvrC motif STH_RS15590 PF17727 CtsR C-terminal dimerization domain STH_RS15590 PF05848 CtsR N-terminal HTH domain STH_RS15595 PF10672 S-adenosylmethionine-dependent methyltransferase STH_RS15595 PF17785 PUA-like domain STH_RS15610 PF03144 Elongation factor Tu domain 2 STH_RS15610 PF03764 Elongation factor G, domain IV STH_RS15610 PF14492 Elongation Factor G, domain II STH_RS15610 PF00679 Elongation factor G C-terminus STH_RS15610 PF00009 Elongation factor Tu GTP binding domain STH_RS15615 PF13419 Haloacid dehalogenase-like hydrolase STH_RS15620 PF04060 Putative Fe-S cluster STH_RS15635 PF00355 Rieske [2Fe-2S] domain STH_RS15645 PF00033 Cytochrome b/b6/petB STH_RS15665 PF00115 Cytochrome C and Quinol oxidase polypeptide I STH_RS15690 PF03449 Transcription elongation factor, N-terminal STH_RS15690 PF01272 Transcription elongation factor, GreA/GreB, C-term STH_RS15695 PF01207 Dihydrouridine synthase (Dus) STH_RS15710 PF02645 Uncharacterised protein, DegV family COG1307 STH_RS15715 PF00196 Bacterial regulatory proteins, luxR family STH_RS15715 PF00072 Response regulator receiver domain STH_RS15725 PF00330 Aconitase family (aconitate hydratase) STH_RS15725 PF00694 Aconitase C-terminal domain STH_RS15745 PF10371 Domain of unknown function STH_RS15745 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II STH_RS15745 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg STH_RS15745 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain STH_RS15745 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase STH_RS15760 PF07969 Amidohydrolase family STH_RS15765 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) STH_RS15770 PF01098 Cell cycle protein STH_RS15780 PF13183 4Fe-4S dicluster domain STH_RS15780 PF13085 2Fe-2S iron-sulfur cluster binding domain STH_RS15785 PF00890 FAD binding domain STH_RS15785 PF02910 Fumarate reductase flavoprotein C-term STH_RS15790 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit STH_RS15800 PF00266 Aminotransferase class-V STH_RS15805 PF02577 Bifunctional nuclease STH_RS15810 PF02391 MoaE protein STH_RS15825 PF03309 Type III pantothenate kinase STH_RS15830 PF03309 Type III pantothenate kinase STH_RS15835 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain STH_RS15835 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain STH_RS15840 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) STH_RS15845 PF02152 Dihydroneopterin aldolase STH_RS15850 PF00809 Pterin binding enzyme STH_RS15855 PF01268 Formate--tetrahydrofolate ligase STH_RS15865 PF01979 Amidohydrolase family STH_RS15870 PF07837 Formiminotransferase domain, N-terminal subdomain STH_RS15870 PF02971 Formiminotransferase domain STH_RS15875 PF01175 Urocanase Rossmann-like domain STH_RS15875 PF17392 Urocanase C-terminal domain STH_RS15875 PF17391 Urocanase N-terminal domain STH_RS15880 PF00221 Aromatic amino acid lyase STH_RS15885 PF05193 Peptidase M16 inactive domain STH_RS15885 PF00675 Insulinase (Peptidase family M16) STH_RS15890 PF05193 Peptidase M16 inactive domain STH_RS15895 PF13344 Haloacid dehalogenase-like hydrolase STH_RS15895 PF00293 NUDIX domain STH_RS15900 PF06480 FtsH Extracellular STH_RS15900 PF17862 AAA+ lid domain STH_RS15900 PF00004 ATPase family associated with various cellular activities (AAA) STH_RS15900 PF01434 Peptidase family M41 STH_RS15905 PF01171 PP-loop family STH_RS15905 PF11734 TilS substrate C-terminal domain STH_RS15920 PF00994 Probable molybdopterin binding domain STH_RS15920 PF03454 MoeA C-terminal region (domain IV) STH_RS15920 PF03453 MoeA N-terminal region (domain I and II) STH_RS15925 PF03205 Molybdopterin guanine dinucleotide synthesis protein B STH_RS15955 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit STH_RS15955 PF00037 4Fe-4S binding domain STH_RS15955 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region STH_RS15960 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region STH_RS15960 PF00037 4Fe-4S binding domain STH_RS15960 PF02256 Iron hydrogenase small subunit STH_RS15960 PF02906 Iron only hydrogenase large subunit, C-terminal domain STH_RS15970 PF02687 FtsX-like permease family STH_RS15975 PF00005 ABC transporter STH_RS15980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase STH_RS15985 PF00486 Transcriptional regulatory protein, C terminal STH_RS15985 PF00072 Response regulator receiver domain STH_RS15990 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain STH_RS15990 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain STH_RS16000 PF08402 TOBE domain STH_RS16000 PF00005 ABC transporter STH_RS16005 PF00528 Binding-protein-dependent transport system inner membrane component STH_RS16015 PF00072 Response regulator receiver domain STH_RS16015 PF00196 Bacterial regulatory proteins, luxR family STH_RS16020 PF17200 Single Cache domain 2 STH_RS16020 PF07730 Histidine kinase STH_RS16055 PF07873 YabP family STH_RS16060 PF01479 S4 domain STH_RS16065 PF00216 Bacterial DNA-binding protein STH_RS16070 PF03819 MazG nucleotide pyrophosphohydrolase domain STH_RS16080 PF01943 Polysaccharide biosynthesis protein STH_RS16080 PF14667 Polysaccharide biosynthesis C-terminal domain STH_RS16085 PF15714 Stage V sporulation protein T C-terminal, transcription factor STH_RS16085 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin STH_RS16090 PF03461 TRCF domain STH_RS16090 PF00271 Helicase conserved C-terminal domain STH_RS16090 PF02559 CarD-like/TRCF domain STH_RS16090 PF17757 UvrB interaction domain STH_RS16090 PF00270 DEAD/DEAH box helicase STH_RS16100 PF07670 Nucleoside recognition STH_RS16105 PF01195 Peptidyl-tRNA hydrolase STH_RS16110 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase STH_RS16110 PF14572 Phosphoribosyl synthetase-associated domain STH_RS16115 PF00132 Bacterial transferase hexapeptide (six repeats) STH_RS16115 PF12804 MobA-like NTP transferase domain STH_RS16130 PF00291 Pyridoxal-phosphate dependent enzyme STH_RS16130 PF13291 ACT domain STH_RS16135 PF09182 Bacterial purine repressor, N-terminal STH_RS16135 PF00156 Phosphoribosyl transferase domain STH_RS16140 PF00132 Bacterial transferase hexapeptide (six repeats) STH_RS16140 PF12804 MobA-like NTP transferase domain STH_RS16145 PF08544 GHMP kinases C terminal STH_RS16145 PF00288 GHMP kinases N terminal domain STH_RS16150 PF06257 Biofilm formation stimulator VEG STH_RS16155 PF04308 Ribonuclease H-like STH_RS16160 PF00398 Ribosomal RNA adenine dimethylase STH_RS16165 PF01476 LysM domain STH_RS16165 PF06725 3D domain STH_RS16200 PF01026 TatD related DNase STH_RS16205 PF01588 Putative tRNA binding domain STH_RS16205 PF08264 Anticodon-binding domain of tRNA STH_RS16205 PF09334 tRNA synthetases class I (M) STH_RS16210 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin STH_RS16210 PF18277 AbrB C-terminal domain STH_RS16215 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases STH_RS16220 PF04468 PSP1 C-terminal conserved region STH_RS16230 PF06153 Cyclic-di-AMP receptor STH_RS16235 PF02223 Thymidylate kinase STH_RS16240 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain STH_RS16240 PF01276 Orn/Lys/Arg decarboxylase, major domain STH_RS16245 PF11638 DnaA N-terminal domain STH_RS16245 PF00308 Bacterial dnaA protein STH_RS16245 PF08299 Bacterial dnaA protein helix-turn-helix STH_RS16255 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II STH_RS16255 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg STH_RS16260 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase STH_RS16265 PF14620 YpeB sporulation STH_RS16270 PF01471 Putative peptidoglycan binding domain STH_RS16270 PF07486 Cell Wall Hydrolase STH_RS16280 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain STH_RS16280 PF01276 Orn/Lys/Arg decarboxylase, major domain STH_RS16285 PF04239 Protein of unknown function (DUF421) STH_RS16310 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion STH_RS16315 PF00873 AcrB/AcrD/AcrF family STH_RS16320 PF00005 ABC transporter STH_RS16320 PF00664 ABC transporter transmembrane region STH_RS16325 PF00664 ABC transporter transmembrane region STH_RS16325 PF00005 ABC transporter STH_RS16330 PF02896 PEP-utilising enzyme, TIM barrel domain STH_RS16330 PF00391 PEP-utilising enzyme, mobile domain STH_RS16330 PF05524 PEP-utilising enzyme, N-terminal STH_RS16335 PF00381 PTS HPr component phosphorylation site STH_RS16355 PF02585 GlcNAc-PI de-N-acetylase STH_RS16360 PF08830 Protein of unknown function (DUF1806) STH_RS16380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase STH_RS16380 PF00672 HAMP domain STH_RS16380 PF00512 His Kinase A (phospho-acceptor) domain STH_RS16385 PF00486 Transcriptional regulatory protein, C terminal STH_RS16385 PF00072 Response regulator receiver domain STH_RS16390 PF03932 CutC family STH_RS16395 PF13247 4Fe-4S dicluster domain STH_RS16395 PF12800 4Fe-4S binding domain STH_RS16400 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region STH_RS16400 PF02256 Iron hydrogenase small subunit STH_RS16400 PF02906 Iron only hydrogenase large subunit, C-terminal domain STH_RS16400 PF00037 4Fe-4S binding domain STH_RS16405 PF12800 4Fe-4S binding domain STH_RS16405 PF13247 4Fe-4S dicluster domain STH_RS16410 PF01568 Molydopterin dinucleotide binding domain STH_RS16410 PF04879 Molybdopterin oxidoreductase Fe4S4 domain STH_RS16410 PF00384 Molybdopterin oxidoreductase STH_RS16415 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region STH_RS16415 PF12838 4Fe-4S dicluster domain STH_RS16415 PF04879 Molybdopterin oxidoreductase Fe4S4 domain STH_RS16415 PF00384 Molybdopterin oxidoreductase STH_RS16415 PF01568 Molydopterin dinucleotide binding domain STH_RS16420 PF01226 Formate/nitrite transporter STH_RS16430 PF00072 Response regulator receiver domain STH_RS16430 PF00158 Sigma-54 interaction domain STH_RS16430 PF02954 Bacterial regulatory protein, Fis family STH_RS16435 PF00512 His Kinase A (phospho-acceptor) domain STH_RS16435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase STH_RS16435 PF13493 Domain of unknown function (DUF4118) STH_RS16435 PF08447 PAS fold STH_RS16435 PF13426 PAS domain STH_RS16435 PF00989 PAS fold STH_RS16440 PF00149 Calcineurin-like phosphoesterase STH_RS16450 PF02590 Predicted SPOUT methyltransferase STH_RS16455 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) STH_RS16470 PF13426 PAS domain STH_RS16470 PF00512 His Kinase A (phospho-acceptor) domain STH_RS16470 PF00672 HAMP domain STH_RS16470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase STH_RS16475 PF00072 Response regulator receiver domain STH_RS16475 PF00486 Transcriptional regulatory protein, C terminal STH_RS16485 PF08858 IDEAL domain STH_RS16485 PF08864 UPF0302 domain STH_RS16500 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) STH_RS16515 PF00709 Adenylosuccinate synthetase STH_RS16520 PF00772 DnaB-like helicase N terminal domain STH_RS16520 PF03796 DnaB-like helicase C terminal domain STH_RS16525 PF05362 Lon protease (S16) C-terminal proteolytic domain STH_RS16525 PF00004 ATPase family associated with various cellular activities (AAA) STH_RS16530 PF01281 Ribosomal protein L9, N-terminal domain STH_RS16530 PF03948 Ribosomal protein L9, C-terminal domain STH_RS16540 PF01084 Ribosomal protein S18 STH_RS16545 PF00436 Single-strand binding protein family STH_RS16550 PF01250 Ribosomal protein S6 STH_RS16570 PF06866 Protein of unknown function (DUF1256) STH_RS16595 PF17762 HTH domain found in ParB protein STH_RS16595 PF02195 ParB-like nuclease domain STH_RS16600 PF13614 AAA domain STH_RS16605 PF02527 rRNA small subunit methyltransferase G STH_RS16610 PF13932 GidA associated domain STH_RS16610 PF01134 Glucose inhibited division protein A STH_RS16615 PF10396 GTP-binding protein TrmE N-terminus STH_RS16615 PF12631 MnmE helical domain STH_RS16615 PF01926 50S ribosome-binding GTPase STH_RS16620 PF01424 R3H domain STH_RS16620 PF14804 Jag N-terminus STH_RS16625 PF02096 60Kd inner membrane protein STH_RS16630 PF01809 Putative membrane protein insertion efficiency factor STH_RS16635 PF00825 Ribonuclease P STH_RS16640 PF00468 Ribosomal protein L34 STH_RS16645 PF17200 Single Cache domain 2 STH_RS16645 PF07730 Histidine kinase STH_RS16665 PF01551 Peptidase family M23 STH_RS16665 PF10145 Phage-related minor tail protein STH_RS16665 PF01464 Transglycosylase SLT domain STH_RS16685 PF01464 Transglycosylase SLT domain STH_RS16685 PF01551 Peptidase family M23 STH_RS16685 PF10145 Phage-related minor tail protein STH_RS16690 PF00293 NUDIX domain STH_RS16690 PF09297 NADH pyrophosphatase zinc ribbon domain STH_RS16695 PF02581 Thiamine monophosphate synthase STH_RS16695 PF02110 Hydroxyethylthiazole kinase family STH_RS16700 PF01522 Polysaccharide deacetylase STH_RS16705 PF00578 AhpC/TSA family STH_RS16750 PF02163 Peptidase family M50 STH_RS16750 PF00571 CBS domain STH_RS16770 PF01928 CYTH domain STH_RS16775 PF07730 Histidine kinase STH_RS16775 PF13185 GAF domain STH_RS16780 PF09587 Bacterial capsule synthesis protein PGA_cap STH_RS16785 PF12146 Serine aminopeptidase, S33 STH_RS16790 PF00005 ABC transporter STH_RS16805 PF08448 PAS fold STH_RS16805 PF00990 Diguanylate cyclase, GGDEF domain STH_RS16810 PF00528 Binding-protein-dependent transport system inner membrane component STH_RS16815 PF00528 Binding-protein-dependent transport system inner membrane component STH_RS16820 PF00425 chorismate binding enzyme STH_RS16820 PF04715 Anthranilate synthase component I, N terminal region STH_RS16835 PF00753 Metallo-beta-lactamase superfamily STH_RS16845 PF08447 PAS fold STH_RS16845 PF13426 PAS domain STH_RS16845 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain STH_RS16855 PF07730 Histidine kinase STH_RS16855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase STH_RS16880 PF11808 Phosphate regulon sensor protein PhoR STH_RS16880 PF00989 PAS fold STH_RS16880 PF00512 His Kinase A (phospho-acceptor) domain STH_RS16880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase STH_RS16885 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain STH_RS16885 PF12729 Four helix bundle sensory module for signal transduction STH_RS16885 PF00672 HAMP domain STH_RS16890 PF00005 ABC transporter STH_RS16900 PF00563 EAL domain STH_RS16900 PF03707 Bacterial signalling protein N terminal repeat STH_RS16900 PF00990 Diguanylate cyclase, GGDEF domain STH_RS16920 PF01551 Peptidase family M23 STH_RS16920 PF10145 Phage-related minor tail protein STH_RS16920 PF01464 Transglycosylase SLT domain STH_RS16950 PF07943 Penicillin-binding protein 5, C-terminal domain STH_RS16950 PF00768 D-alanyl-D-alanine carboxypeptidase STH_RS16955 PF00005 ABC transporter STH_RS16955 PF08402 TOBE domain STH_RS16960 PF07730 Histidine kinase STH_RS16960 PF13185 GAF domain STH_RS16965 PF01520 N-acetylmuramoyl-L-alanine amidase STH_RS16985 PF01551 Peptidase family M23 STH_RS17010 PF12791 Anti-sigma factor N-terminus STH_RS17015 PF08486 Stage II sporulation protein STH_RS17020 PF00196 Bacterial regulatory proteins, luxR family STH_RS17020 PF00072 Response regulator receiver domain STH_RS17025 PF01047 MarR family STH_RS17030 PF04542 Sigma-70 region 2 STH_RS17030 PF08281 Sigma-70, region 4 STH_RS17040 PF00942 Cellulose binding domain STH_RS17040 PF00553 Cellulose binding domain STH_RS17040 PF00041 Fibronectin type III domain STH_RS17040 PF00759 Glycosyl hydrolase family 9 STH_RS17045 PF00781 Diacylglycerol kinase catalytic domain STH_RS17075 PF01435 Peptidase family M48 STH_RS17105 PF01476 LysM domain STH_RS17105 PF06725 3D domain STH_RS17125 PF01580 FtsK/SpoIIIE family STH_RS17125 PF09397 Ftsk gamma domain STH_RS17125 PF17854 FtsK alpha domain STH_RS17165 PF03099 Biotin/lipoate A/B protein ligase family STH_RS17165 PF00293 NUDIX domain STH_RS17175 PF02631 RecX family STH_RS17185 PF01066 CDP-alcohol phosphatidyltransferase STH_RS17200 PF03449 Transcription elongation factor, N-terminal STH_RS17200 PF01272 Transcription elongation factor, GreA/GreB, C-term STH_RS17210 PF06153 Cyclic-di-AMP receptor STH_RS17215 PF01522 Polysaccharide deacetylase STH_RS17220 PF01522 Polysaccharide deacetylase STH_RS17230 PF08447 PAS fold STH_RS17230 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain STH_RS17230 PF13426 PAS domain STH_RS17235 PF03816 Cell envelope-related transcriptional attenuator domain STH_RS17240 PF02810 SEC-C motif STH_RS17265 PF00005 ABC transporter STH_RS17265 PF00664 ABC transporter transmembrane region STH_RS17270 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term STH_RS17285 PF00486 Transcriptional regulatory protein, C terminal STH_RS17285 PF00072 Response regulator receiver domain STH_RS17310 PF02630 SCO1/SenC STH_RS17330 PF00990 Diguanylate cyclase, GGDEF domain STH_RS17335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase STH_RS17335 PF07730 Histidine kinase STH_RS17345 PF13476 AAA domain STH_RS17350 PF12804 MobA-like NTP transferase domain STH_RS17370 PF00440 Bacterial regulatory proteins, tetR family STH_RS17390 PF13280 WYL domain STH_RS17390 PF08279 HTH domain STH_RS17395 PF06224 Winged helix DNA-binding domain STH_RS17400 PF08359 YsiA-like protein, C-terminal region STH_RS17400 PF00440 Bacterial regulatory proteins, tetR family STH_RS17405 PF00565 Staphylococcal nuclease homologue STH_RS17430 PF04794 YdjC-like protein STH_RS17435 PF00583 Acetyltransferase (GNAT) family STH_RS17445 PF00188 Cysteine-rich secretory protein family STH_RS17465 PF01209 ubiE/COQ5 methyltransferase family STH_RS17505 PF16363 GDP-mannose 4,6 dehydratase STH_RS17510 PF02397 Bacterial sugar transferase STH_RS17515 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase STH_RS17515 PF10135 Rod binding protein STH_RS17525 PF13426 PAS domain STH_RS17525 PF08447 PAS fold STH_RS17525 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain STH_RS17530 PF12838 4Fe-4S dicluster domain STH_RS17545 PF01464 Transglycosylase SLT domain STH_RS17560 PF00293 NUDIX domain STH_RS17575 PF01209 ubiE/COQ5 methyltransferase family STH_RS17580 PF02634 FdhD/NarQ family STH_RS17590 PF08448 PAS fold STH_RS17590 PF00990 Diguanylate cyclase, GGDEF domain STH_RS17600 PF07730 Histidine kinase STH_RS17605 PF00963 Cohesin domain STH_RS17605 PF00395 S-layer homology domain STH_RS17620 PF01476 LysM domain STH_RS17620 PF05257 CHAP domain STH_RS17625 PF08359 YsiA-like protein, C-terminal region STH_RS17625 PF00440 Bacterial regulatory proteins, tetR family STH_RS17645 PF08460 Bacterial SH3 domain STH_RS17645 PF01551 Peptidase family M23 STH_RS17650 PF01464 Transglycosylase SLT domain STH_RS17650 PF00497 Bacterial extracellular solute-binding proteins, family 3 STH_RS17655 PF01551 Peptidase family M23 STH_RS17655 PF04225 Opacity-associated protein A LysM-like domain STH_RS17670 PF00188 Cysteine-rich secretory protein family STH_RS17675 PF02424 ApbE family STH_RS17680 PF05343 M42 glutamyl aminopeptidase STH_RS17690 PF00293 NUDIX domain STH_RS17690 PF13344 Haloacid dehalogenase-like hydrolase STH_RS17695 PF02735 Ku70/Ku80 beta-barrel domain STH_RS17700 PF03613 PTS system mannose/fructose/sorbose family IID component STH_RS17725 PF01230 HIT domain STH_RS17730 PF04723 Glycine reductase complex selenoprotein A STH_RS17735 PF04026 SpoVG