SYNPCC7942_RS00005	SM00480	DNA polymerase III beta subunit
SYNPCC7942_RS00075	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
SYNPCC7942_RS00195	SM01350	SYNPCC7942_RS00195
SYNPCC7942_RS00200	SM00905	Dihydroneopterin aldolase
SYNPCC7942_RS00225	SM00028	Tetratricopeptide repeats
SYNPCC7942_RS00235	SM00028	Tetratricopeptide repeats
SYNPCC7942_RS00255	SM00028	Tetratricopeptide repeats
SYNPCC7942_RS00315	SM00195	Dual specificity phosphatase, catalytic domain
SYNPCC7942_RS00335	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7942_RS00370	SM01011	Aminopeptidase P, N-terminal domain
SYNPCC7942_RS00375	SM00062	Bacterial periplasmic substrate-binding proteins
SYNPCC7942_RS00375	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
SYNPCC7942_RS00380	SM00530	Helix-turn-helix XRE-family like proteins 
SYNPCC7942_RS00400	SM00363	S4 RNA-binding domain
SYNPCC7942_RS00405	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7942_RS00425	SM00642	Alpha-amylase domain
SYNPCC7942_RS00435	SM00849	Metallo-beta-lactamase superfamily
SYNPCC7942_RS00455	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SYNPCC7942_RS00480	SM00448	cheY-homologous receiver domain
SYNPCC7942_RS00480	SM00862	Transcriptional regulatory protein, C terminal
SYNPCC7942_RS00525	SM00248	ankyrin repeats
SYNPCC7942_RS00550	SM00470	ParB-like nuclease domain
SYNPCC7942_RS00560	SM00530	Helix-turn-helix XRE-family like proteins 
SYNPCC7942_RS00590	SM00845	GatB domain
SYNPCC7942_RS00620	SM00052	Putative diguanylate phosphodiesterase
SYNPCC7942_RS00645	SM00100	Cyclic nucleotide-monophosphate binding domain
SYNPCC7942_RS00645	SM00419	helix_turn_helix, cAMP Regulatory protein
SYNPCC7942_RS00655	SM00732	Likely ribonuclease with RNase H fold.
SYNPCC7942_RS00665	SM00100	Cyclic nucleotide-monophosphate binding domain
SYNPCC7942_RS00725	SM00861	Transketolase, pyrimidine binding domain
SYNPCC7942_RS00765	SM00267	diguanylate cyclase
SYNPCC7942_RS00765	SM00448	cheY-homologous receiver domain
SYNPCC7942_RS00800	SM00450	Rhodanese Homology Domain
SYNPCC7942_RS00805	SM00232	JAB/MPN domain
SYNPCC7942_RS00860	SM01230	SYNPCC7942_RS00860
SYNPCC7942_RS00905	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7942_RS00920	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7942_RS00955	SM00052	Putative diguanylate phosphodiesterase
SYNPCC7942_RS00955	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SYNPCC7942_RS00955	SM00091	PAS domain
SYNPCC7942_RS00955	SM00267	diguanylate cyclase
SYNPCC7942_RS00985	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
SYNPCC7942_RS00985	SM00474	3'-5' exonuclease
SYNPCC7942_RS00985	SM00475	5'-3' exonuclease
SYNPCC7942_RS00985	SM00482	DNA polymerase A domain
SYNPCC7942_RS01055	SM00028	Tetratricopeptide repeats
SYNPCC7942_RS01095	SM00829	Enoylreductase
SYNPCC7942_RS01195	SM00100	Cyclic nucleotide-monophosphate binding domain
SYNPCC7942_RS01200	SM00100	Cyclic nucleotide-monophosphate binding domain
SYNPCC7942_RS01250	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
SYNPCC7942_RS01255	SM00062	Bacterial periplasmic substrate-binding proteins
SYNPCC7942_RS01270	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7942_RS01280	SM00479	SYNPCC7942_RS01280
SYNPCC7942_RS01285	SM01093	SYNPCC7942_RS01285
SYNPCC7942_RS01295	SM00434	DNA Topoisomerase IV
SYNPCC7942_RS01300	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7942_RS01325	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7942_RS01325	SM01086	C-terminal, D2-small domain, of ClpB protein
SYNPCC7942_RS01355	SM00271	DnaJ molecular chaperone homology domain
SYNPCC7942_RS01375	SM00028	Tetratricopeptide repeats
SYNPCC7942_RS01410	SM00278	Helix-hairpin-helix DNA-binding motif class 1
SYNPCC7942_RS01410	SM00292	breast cancer carboxy-terminal domain
SYNPCC7942_RS01410	SM00532	Ligase N family
SYNPCC7942_RS01420	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
SYNPCC7942_RS01425	SM00852	Probable molybdopterin binding domain
SYNPCC7942_RS01445	SM00877	SYNPCC7942_RS01445
SYNPCC7942_RS01450	SM00877	SYNPCC7942_RS01450
SYNPCC7942_RS01470	SM00957	SecA DEAD-like domain
SYNPCC7942_RS01470	SM00958	SecA preprotein cross-linking domain
SYNPCC7942_RS01515	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7942_RS01540	SM00155	Phospholipase D. Active site motifs.
SYNPCC7942_RS01585	SM00650	Ribosomal RNA adenine dimethylases
SYNPCC7942_RS01605	SM00998	Adenylosuccinate lyase C-terminus
SYNPCC7942_RS01625	SM00363	S4 RNA-binding domain
SYNPCC7942_RS01635	SM00938	Nitrogen regulatory protein P-II
SYNPCC7942_RS01655	SM01094	CpcD/allophycocyanin linker domain
SYNPCC7942_RS01770	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7942_RS01780	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7942_RS01835	SM00897	FIST N domain
SYNPCC7942_RS01835	SM01204	SYNPCC7942_RS01835
SYNPCC7942_RS01840	SM01093	SYNPCC7942_RS01840
SYNPCC7942_RS02000	SM00925	MltA specific insert domain
SYNPCC7942_RS02020	SM00798	AICARFT/IMPCHase bienzyme
SYNPCC7942_RS02020	SM00851	MGS-like domain
SYNPCC7942_RS02060	SM00937	SYNPCC7942_RS02060
SYNPCC7942_RS02130	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7942_RS02140	SM00729	Elongator protein 3, MiaB family, Radical SAM
SYNPCC7942_RS02140	SM00876	Biotin and Thiamin Synthesis associated domain
SYNPCC7942_RS02180	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7942_RS02185	SM00917	LeuA allosteric (dimerisation) domain
SYNPCC7942_RS02195	SM00861	Transketolase, pyrimidine binding domain
SYNPCC7942_RS02255	SM01001	AIR carboxylase
SYNPCC7942_RS02285	SM00478	endonuclease III
SYNPCC7942_RS02285	SM00525	SYNPCC7942_RS02285
SYNPCC7942_RS02315	SM00387	Histidine kinase-like ATPases
SYNPCC7942_RS02315	SM00388	His Kinase A (phosphoacceptor) domain
SYNPCC7942_RS02360	SM00226	Low molecular weight phosphatase family
SYNPCC7942_RS02380	SM00235	Zinc-dependent metalloprotease
SYNPCC7942_RS02440	SM00838	Elongation factor G C-terminus
SYNPCC7942_RS02445	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SYNPCC7942_RS02445	SM00387	Histidine kinase-like ATPases
SYNPCC7942_RS02445	SM00388	His Kinase A (phosphoacceptor) domain
SYNPCC7942_RS02470	SM00855	Phosphoglycerate mutase family
SYNPCC7942_RS02495	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SYNPCC7942_RS02495	SM00091	PAS domain
SYNPCC7942_RS02495	SM00267	diguanylate cyclase
SYNPCC7942_RS02505	SM00904	Riboflavin kinase
SYNPCC7942_RS02605	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7942_RS02620	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
SYNPCC7942_RS02620	SM00245	tail specific protease
SYNPCC7942_RS02640	SM00877	SYNPCC7942_RS02640
SYNPCC7942_RS02700	SM00028	Tetratricopeptide repeats
SYNPCC7942_RS02725	SM00823	Phosphopantetheine attachment site
SYNPCC7942_RS02730	SM00825	Beta-ketoacyl synthase
SYNPCC7942_RS02735	SM00861	Transketolase, pyrimidine binding domain
SYNPCC7942_RS02760	SM00729	Elongator protein 3, MiaB family, Radical SAM
SYNPCC7942_RS02830	SM00448	cheY-homologous receiver domain
SYNPCC7942_RS02830	SM00862	Transcriptional regulatory protein, C terminal
SYNPCC7942_RS02850	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7942_RS02865	SM00487	DEAD-like helicases superfamily
SYNPCC7942_RS02865	SM00490	helicase superfamily c-terminal domain
SYNPCC7942_RS02870	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7942_RS02875	SM00240	Forkhead associated domain
SYNPCC7942_RS02965	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7942_RS02975	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
SYNPCC7942_RS03045	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
SYNPCC7942_RS03065	SM00257	Lysin motif
SYNPCC7942_RS03080	SM00220	Serine/Threonine protein kinases, catalytic domain
SYNPCC7942_RS03135	SM00463	Small MutS-related domain
SYNPCC7942_RS03135	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
SYNPCC7942_RS03135	SM00534	ATPase domain of DNA mismatch repair MUTS family
SYNPCC7942_RS03145	SM00855	Phosphoglycerate mutase family
SYNPCC7942_RS03155	SM00450	Rhodanese Homology Domain
SYNPCC7942_RS03170	SM00996	S-adenosyl-L-homocysteine hydrolase
SYNPCC7942_RS03170	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
SYNPCC7942_RS03190	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7942_RS03205	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7942_RS03205	SM00393	Putative single-stranded nucleic acids-binding domain
SYNPCC7942_RS03255	SM00649	Ribosomal protein L11/L12
SYNPCC7942_RS03260	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
SYNPCC7942_RS03260	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
SYNPCC7942_RS03270	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7942_RS03270	SM01086	C-terminal, D2-small domain, of ClpB protein
SYNPCC7942_RS03280	SM01192	SYNPCC7942_RS03280
SYNPCC7942_RS03280	SM01193	SYNPCC7942_RS03280
SYNPCC7942_RS03285	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7942_RS03305	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SYNPCC7942_RS03305	SM00387	Histidine kinase-like ATPases
SYNPCC7942_RS03305	SM00388	His Kinase A (phosphoacceptor) domain
SYNPCC7942_RS03305	SM00448	cheY-homologous receiver domain
SYNPCC7942_RS03335	SM00487	DEAD-like helicases superfamily
SYNPCC7942_RS03335	SM00490	helicase superfamily c-terminal domain
SYNPCC7942_RS03395	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
SYNPCC7942_RS03395	SM01080	SYNPCC7942_RS03395
SYNPCC7942_RS03400	SM00100	Cyclic nucleotide-monophosphate binding domain
SYNPCC7942_RS03410	SM00271	DnaJ molecular chaperone homology domain
SYNPCC7942_RS03445	SM00478	endonuclease III
SYNPCC7942_RS03445	SM00525	SYNPCC7942_RS03445
SYNPCC7942_RS03470	SM00474	3'-5' exonuclease
SYNPCC7942_RS03480	SM00360	RNA recognition motif
SYNPCC7942_RS03505	SM00822	SYNPCC7942_RS03505
SYNPCC7942_RS03530	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SYNPCC7942_RS03560	SM00316	Ribosomal protein S1-like RNA-binding domain
SYNPCC7942_RS03645	SM00851	MGS-like domain
SYNPCC7942_RS03645	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
SYNPCC7942_RS03650	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
SYNPCC7942_RS03650	SM00245	tail specific protease
SYNPCC7942_RS03660	SM00287	Bacterial SH3 domain homologues
SYNPCC7942_RS03660	SM00646	SYNPCC7942_RS03660
SYNPCC7942_RS03750	SM00487	DEAD-like helicases superfamily
SYNPCC7942_RS03750	SM00490	helicase superfamily c-terminal domain
SYNPCC7942_RS03755	SM00990	SYNPCC7942_RS03755
SYNPCC7942_RS03760	SM00778	Zinc-binding domain of primase-helicase
SYNPCC7942_RS03955	SM00530	Helix-turn-helix XRE-family like proteins 
SYNPCC7942_RS03960	SM00530	Helix-turn-helix XRE-family like proteins 
SYNPCC7942_RS04040	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SYNPCC7942_RS04045	SM00220	Serine/Threonine protein kinases, catalytic domain
SYNPCC7942_RS04055	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7942_RS04090	SM00360	RNA recognition motif
SYNPCC7942_RS04135	SM00729	Elongator protein 3, MiaB family, Radical SAM
SYNPCC7942_RS04200	SM00028	Tetratricopeptide repeats
SYNPCC7942_RS04200	SM00271	DnaJ molecular chaperone homology domain
SYNPCC7942_RS04215	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7942_RS04220	SM00052	Putative diguanylate phosphodiesterase
SYNPCC7942_RS04220	SM00267	diguanylate cyclase
SYNPCC7942_RS04235	SM01211	SYNPCC7942_RS04235
SYNPCC7942_RS04275	SM00833	Cobalamin synthesis protein cobW C-terminal domain
SYNPCC7942_RS04295	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SYNPCC7942_RS04320	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7942_RS04335	SM00729	Elongator protein 3, MiaB family, Radical SAM
SYNPCC7942_RS04365	SM00481	DNA polymerase alpha chain like domain
SYNPCC7942_RS04375	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7942_RS04380	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7942_RS04410	SM00448	cheY-homologous receiver domain
SYNPCC7942_RS04415	SM00448	cheY-homologous receiver domain
SYNPCC7942_RS04420	SM00260	Two component signalling adaptor domain
SYNPCC7942_RS04425	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SYNPCC7942_RS04425	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SYNPCC7942_RS04425	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SYNPCC7942_RS04430	SM00073	Histidine Phosphotransfer domain
SYNPCC7942_RS04430	SM00260	Two component signalling adaptor domain
SYNPCC7942_RS04430	SM00387	Histidine kinase-like ATPases
SYNPCC7942_RS04430	SM00448	cheY-homologous receiver domain
SYNPCC7942_RS04430	SM01231	SYNPCC7942_RS04430
SYNPCC7942_RS04435	SM00260	Two component signalling adaptor domain
SYNPCC7942_RS04505	SM00487	DEAD-like helicases superfamily
SYNPCC7942_RS04505	SM00490	helicase superfamily c-terminal domain
SYNPCC7942_RS04515	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
SYNPCC7942_RS04520	SM00729	Elongator protein 3, MiaB family, Radical SAM
SYNPCC7942_RS04525	SM00316	Ribosomal protein S1-like RNA-binding domain
SYNPCC7942_RS04545	SM00464	Found in ATP-dependent protease La (LON)
SYNPCC7942_RS04550	SM01403	SYNPCC7942_RS04550
SYNPCC7942_RS04560	SM00838	Elongation factor G C-terminus
SYNPCC7942_RS04560	SM00889	Elongation factor G, domain IV
SYNPCC7942_RS04595	SM00729	Elongator protein 3, MiaB family, Radical SAM
SYNPCC7942_RS04690	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7942_RS04720	SM00930	SYNPCC7942_RS04720
SYNPCC7942_RS04755	SM00091	PAS domain
SYNPCC7942_RS04755	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SYNPCC7942_RS04755	SM00387	Histidine kinase-like ATPases
SYNPCC7942_RS04755	SM00388	His Kinase A (phosphoacceptor) domain
SYNPCC7942_RS04760	SM01209	SYNPCC7942_RS04760
SYNPCC7942_RS04760	SM01210	SYNPCC7942_RS04760
SYNPCC7942_RS04815	SM00450	Rhodanese Homology Domain
SYNPCC7942_RS04820	SM00849	Metallo-beta-lactamase superfamily
SYNPCC7942_RS04825	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SYNPCC7942_RS04835	SM00530	Helix-turn-helix XRE-family like proteins 
SYNPCC7942_RS04840	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7942_RS04845	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7942_RS04870	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7942_RS04915	SM00833	Cobalamin synthesis protein cobW C-terminal domain
SYNPCC7942_RS04935	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7942_RS04990	SM00959	Rho termination factor, N-terminal domain
SYNPCC7942_RS05010	SM00116	Domain in cystathionine beta-synthase and other proteins.
SYNPCC7942_RS05020	SM01094	CpcD/allophycocyanin linker domain
SYNPCC7942_RS05050	SM01133	SYNPCC7942_RS05050
SYNPCC7942_RS05125	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7942_RS05160	SM00028	Tetratricopeptide repeats
SYNPCC7942_RS05180	SM00530	Helix-turn-helix XRE-family like proteins 
SYNPCC7942_RS05185	SM00363	S4 RNA-binding domain
SYNPCC7942_RS05190	SM00091	PAS domain
SYNPCC7942_RS05190	SM00387	Histidine kinase-like ATPases
SYNPCC7942_RS05190	SM00388	His Kinase A (phosphoacceptor) domain
SYNPCC7942_RS05195	SM00448	cheY-homologous receiver domain
SYNPCC7942_RS05195	SM00862	Transcriptional regulatory protein, C terminal
SYNPCC7942_RS05210	SM00073	Histidine Phosphotransfer domain
SYNPCC7942_RS05210	SM00260	Two component signalling adaptor domain
SYNPCC7942_RS05210	SM00387	Histidine kinase-like ATPases
SYNPCC7942_RS05210	SM00448	cheY-homologous receiver domain
SYNPCC7942_RS05210	SM01231	SYNPCC7942_RS05210
SYNPCC7942_RS05215	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SYNPCC7942_RS05215	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SYNPCC7942_RS05220	SM00260	Two component signalling adaptor domain
SYNPCC7942_RS05245	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
SYNPCC7942_RS05265	SM00028	Tetratricopeptide repeats
SYNPCC7942_RS05310	SM00460	Transglutaminase/protease-like homologues
SYNPCC7942_RS05380	SM01094	CpcD/allophycocyanin linker domain
SYNPCC7942_RS05385	SM01094	CpcD/allophycocyanin linker domain
SYNPCC7942_RS05390	SM01094	CpcD/allophycocyanin linker domain
SYNPCC7942_RS05405	SM00567	E-Z type HEAT repeats
SYNPCC7942_RS05410	SM00567	E-Z type HEAT repeats
SYNPCC7942_RS05415	SM00530	Helix-turn-helix XRE-family like proteins 
SYNPCC7942_RS05465	SM00487	DEAD-like helicases superfamily
SYNPCC7942_RS05535	SM00487	DEAD-like helicases superfamily
SYNPCC7942_RS05535	SM00490	helicase superfamily c-terminal domain
SYNPCC7942_RS05555	SM00831	Cation transporter/ATPase, N-terminus
SYNPCC7942_RS05570	SM00642	Alpha-amylase domain
SYNPCC7942_RS05590	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7942_RS05590	SM01086	C-terminal, D2-small domain, of ClpB protein
SYNPCC7942_RS05640	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7942_RS05640	SM00760	Bacterial dnaA protein helix-turn-helix domain
SYNPCC7942_RS05645	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
SYNPCC7942_RS05675	SM00028	Tetratricopeptide repeats
SYNPCC7942_RS05680	SM00411	bacterial (prokaryotic) histone like domain
SYNPCC7942_RS05690	SM00448	cheY-homologous receiver domain
SYNPCC7942_RS05695	SM00220	Serine/Threonine protein kinases, catalytic domain
SYNPCC7942_RS05700	SM00363	S4 RNA-binding domain
SYNPCC7942_RS05755	SM00955	SYNPCC7942_RS05755
SYNPCC7942_RS05760	SM00073	Histidine Phosphotransfer domain
SYNPCC7942_RS05785	SM00331	Sigma factor PP2C-like phosphatases
SYNPCC7942_RS05785	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
SYNPCC7942_RS05800	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7942_RS05815	SM00567	E-Z type HEAT repeats
SYNPCC7942_RS05880	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SYNPCC7942_RS05880	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SYNPCC7942_RS05935	SM00052	Putative diguanylate phosphodiesterase
SYNPCC7942_RS05935	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SYNPCC7942_RS05935	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SYNPCC7942_RS05935	SM00091	PAS domain
SYNPCC7942_RS05935	SM00267	diguanylate cyclase
SYNPCC7942_RS05940	SM00347	helix_turn_helix multiple antibiotic resistance protein
SYNPCC7942_RS05980	SM00857	Resolvase, N terminal domain
SYNPCC7942_RS05990	SM01001	AIR carboxylase
SYNPCC7942_RS06100	SM00072	Guanylate kinase homologues.
SYNPCC7942_RS06110	SM00563	Phosphate acyltransferases
SYNPCC7942_RS06140	SM00967	RNA 2'-O ribose methyltransferase substrate binding
SYNPCC7942_RS06235	SM01248	SYNPCC7942_RS06235
SYNPCC7942_RS06240	SM01247	SYNPCC7942_RS06240
SYNPCC7942_RS06255	SM00448	cheY-homologous receiver domain
SYNPCC7942_RS06290	SM00278	Helix-hairpin-helix DNA-binding motif class 1
SYNPCC7942_RS06330	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
SYNPCC7942_RS06335	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7942_RS06340	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7942_RS06370	SM00100	Cyclic nucleotide-monophosphate binding domain
SYNPCC7942_RS06375	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7942_RS06425	SM00100	Cyclic nucleotide-monophosphate binding domain
SYNPCC7942_RS06470	SM00981	SYNPCC7942_RS06470
SYNPCC7942_RS06500	SM00116	Domain in cystathionine beta-synthase and other proteins.
SYNPCC7942_RS06500	SM00924	MgtE intracellular N domain
SYNPCC7942_RS06525	SM00028	Tetratricopeptide repeats
SYNPCC7942_RS06535	SM00062	Bacterial periplasmic substrate-binding proteins
SYNPCC7942_RS06565	SM00729	Elongator protein 3, MiaB family, Radical SAM
SYNPCC7942_RS06580	SM00852	Probable molybdopterin binding domain
SYNPCC7942_RS06585	SM00852	Probable molybdopterin binding domain
SYNPCC7942_RS06605	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SYNPCC7942_RS06610	SM00400	zinc finger
SYNPCC7942_RS06610	SM00493	SYNPCC7942_RS06610
SYNPCC7942_RS06615	SM00873	B3/4 domain
SYNPCC7942_RS06615	SM00874	tRNA synthetase B5 domain
SYNPCC7942_RS06615	SM00896	Ferredoxin-fold anticodon binding domain
SYNPCC7942_RS06620	SM00220	Serine/Threonine protein kinases, catalytic domain
SYNPCC7942_RS06625	SM00563	Phosphate acyltransferases
SYNPCC7942_RS06635	SM00919	Malic enzyme, NAD binding domain
SYNPCC7942_RS06635	SM01274	SYNPCC7942_RS06635
SYNPCC7942_RS06640	SM00267	diguanylate cyclase
SYNPCC7942_RS06655	SM00487	DEAD-like helicases superfamily
SYNPCC7942_RS06655	SM00490	helicase superfamily c-terminal domain
SYNPCC7942_RS06675	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7942_RS06710	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7942_RS06720	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7942_RS06735	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7942_RS06750	SM00880	SYNPCC7942_RS06750
SYNPCC7942_RS06765	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
SYNPCC7942_RS06765	SM01232	SYNPCC7942_RS06765
SYNPCC7942_RS06770	SM00487	DEAD-like helicases superfamily
SYNPCC7942_RS06770	SM00490	helicase superfamily c-terminal domain
SYNPCC7942_RS06770	SM01142	SYNPCC7942_RS06770
SYNPCC7942_RS06775	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7942_RS06780	SM00487	DEAD-like helicases superfamily
SYNPCC7942_RS06780	SM00490	helicase superfamily c-terminal domain
SYNPCC7942_RS06780	SM00982	SYNPCC7942_RS06780
SYNPCC7942_RS06780	SM01058	CarD-like/TRCF domain
SYNPCC7942_RS06835	SM00191	Integrin alpha (beta-propellor repeats).
SYNPCC7942_RS06925	SM00052	Putative diguanylate phosphodiesterase
SYNPCC7942_RS06925	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SYNPCC7942_RS06925	SM00091	PAS domain
SYNPCC7942_RS06925	SM00267	diguanylate cyclase
SYNPCC7942_RS06925	SM00448	cheY-homologous receiver domain
SYNPCC7942_RS06930	SM00448	cheY-homologous receiver domain
SYNPCC7942_RS06935	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SYNPCC7942_RS06935	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SYNPCC7942_RS06935	SM00091	PAS domain
SYNPCC7942_RS06935	SM00387	Histidine kinase-like ATPases
SYNPCC7942_RS06935	SM00388	His Kinase A (phosphoacceptor) domain
SYNPCC7942_RS07005	SM00493	SYNPCC7942_RS07005
SYNPCC7942_RS07020	SM01018	B12 binding domain
SYNPCC7942_RS07045	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SYNPCC7942_RS07045	SM00954	Region found in RelA / SpoT proteins
SYNPCC7942_RS07060	SM00878	Biotin carboxylase C-terminal domain
SYNPCC7942_RS07070	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7942_RS07075	SM00052	Putative diguanylate phosphodiesterase
SYNPCC7942_RS07075	SM00091	PAS domain
SYNPCC7942_RS07075	SM00267	diguanylate cyclase
SYNPCC7942_RS07105	SM01057	Eukaryotic-type carbonic anhydrase
SYNPCC7942_RS07120	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7942_RS07135	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
SYNPCC7942_RS07165	SM00633	Glycosyl hydrolase family 10
SYNPCC7942_RS07180	SM00849	Metallo-beta-lactamase superfamily
SYNPCC7942_RS07185	SM00448	cheY-homologous receiver domain
SYNPCC7942_RS07185	SM00862	Transcriptional regulatory protein, C terminal
SYNPCC7942_RS07195	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7942_RS07215	SM00917	LeuA allosteric (dimerisation) domain
SYNPCC7942_RS07235	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7942_RS07245	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
SYNPCC7942_RS07245	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
SYNPCC7942_RS07245	SM00493	SYNPCC7942_RS07245
SYNPCC7942_RS07270	SM00877	SYNPCC7942_RS07270
SYNPCC7942_RS07280	SM00961	Ribulose bisphosphate carboxylase, small chain
SYNPCC7942_RS07290	SM00877	SYNPCC7942_RS07290
SYNPCC7942_RS07300	SM00961	Ribulose bisphosphate carboxylase, small chain
SYNPCC7942_RS07330	SM00859	Semialdehyde dehydrogenase, NAD binding domain
SYNPCC7942_RS07405	SM00947	Carbonic anhydrase
SYNPCC7942_RS07420	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7942_RS07430	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7942_RS07435	SM00448	cheY-homologous receiver domain
SYNPCC7942_RS07435	SM00862	Transcriptional regulatory protein, C terminal
SYNPCC7942_RS07450	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
SYNPCC7942_RS07455	SM00563	Phosphate acyltransferases
SYNPCC7942_RS07505	SM00271	DnaJ molecular chaperone homology domain
SYNPCC7942_RS07595	SM01234	SYNPCC7942_RS07595
SYNPCC7942_RS07600	SM00363	S4 RNA-binding domain
SYNPCC7942_RS07600	SM01390	SYNPCC7942_RS07600
SYNPCC7942_RS07615	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7942_RS07620	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7942_RS07680	SM00363	S4 RNA-binding domain
SYNPCC7942_RS07690	SM01329	SYNPCC7942_RS07690
SYNPCC7942_RS07705	SM00729	Elongator protein 3, MiaB family, Radical SAM
SYNPCC7942_RS07745	SM00331	Sigma factor PP2C-like phosphatases
SYNPCC7942_RS07745	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
SYNPCC7942_RS07750	SM00855	Phosphoglycerate mutase family
SYNPCC7942_RS07755	SM00388	His Kinase A (phosphoacceptor) domain
SYNPCC7942_RS07785	SM00663	RNA polymerase I subunit A N-terminus
SYNPCC7942_RS07840	SM00950	SYNPCC7942_RS07840
SYNPCC7942_RS07885	SM00955	SYNPCC7942_RS07885
SYNPCC7942_RS07920	SM00481	DNA polymerase alpha chain like domain
SYNPCC7942_RS08055	SM00836	DALR anticodon binding domain
SYNPCC7942_RS08055	SM01016	Arginyl tRNA synthetase N terminal dom
SYNPCC7942_RS08065	SM00404	Protein tyrosine phosphatase, catalytic domain motif
SYNPCC7942_RS08075	SM00631	SYNPCC7942_RS08075
SYNPCC7942_RS08095	SM00644	SYNPCC7942_RS08095
SYNPCC7942_RS08100	SM00387	Histidine kinase-like ATPases
SYNPCC7942_RS08100	SM00388	His Kinase A (phosphoacceptor) domain
SYNPCC7942_RS08110	SM00116	Domain in cystathionine beta-synthase and other proteins.
SYNPCC7942_RS08125	SM00316	Ribosomal protein S1-like RNA-binding domain
SYNPCC7942_RS08195	SM00554	Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.
SYNPCC7942_RS08210	SM00306	Hint (Hedgehog/Intein) domain N-terminal region
SYNPCC7942_RS08225	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
SYNPCC7942_RS08225	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
SYNPCC7942_RS08255	SM00393	Putative single-stranded nucleic acids-binding domain
SYNPCC7942_RS08265	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7942_RS08270	SM00729	Elongator protein 3, MiaB family, Radical SAM
SYNPCC7942_RS08320	SM00028	Tetratricopeptide repeats
SYNPCC7942_RS08360	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7942_RS08380	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SYNPCC7942_RS08380	SM00267	diguanylate cyclase
SYNPCC7942_RS08390	SM00358	Double-stranded RNA binding motif
SYNPCC7942_RS08390	SM00535	Ribonuclease III family
SYNPCC7942_RS08425	SM00729	Elongator protein 3, MiaB family, Radical SAM
SYNPCC7942_RS08475	SM00840	SYNPCC7942_RS08475
SYNPCC7942_RS08560	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7942_RS08575	SM00930	SYNPCC7942_RS08575
SYNPCC7942_RS08580	SM00419	helix_turn_helix, cAMP Regulatory protein
SYNPCC7942_RS08605	SM00450	Rhodanese Homology Domain
SYNPCC7942_RS08620	SM00448	cheY-homologous receiver domain
SYNPCC7942_RS08625	SM00434	DNA Topoisomerase IV
SYNPCC7942_RS08640	SM00704	CDGSH-type zinc finger. Function unknown.
SYNPCC7942_RS08670	SM00872	Alpha mannosidase, middle domain
SYNPCC7942_RS08730	SM00052	Putative diguanylate phosphodiesterase
SYNPCC7942_RS08730	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SYNPCC7942_RS08730	SM00091	PAS domain
SYNPCC7942_RS08730	SM00267	diguanylate cyclase
SYNPCC7942_RS08745	SM01329	SYNPCC7942_RS08745
SYNPCC7942_RS08760	SM00567	E-Z type HEAT repeats
SYNPCC7942_RS08780	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SYNPCC7942_RS08835	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7942_RS08850	SM00422	helix_turn_helix, mercury resistance
SYNPCC7942_RS08865	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
SYNPCC7942_RS08915	SM00185	Armadillo/beta-catenin-like repeats
SYNPCC7942_RS08915	SM00567	E-Z type HEAT repeats
SYNPCC7942_RS08945	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
SYNPCC7942_RS08945	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
SYNPCC7942_RS09000	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7942_RS09000	SM00962	SRP54-type protein, GTPase domain
SYNPCC7942_RS09000	SM00963	SRP54-type protein, helical bundle domain
SYNPCC7942_RS09045	SM00853	MutL C terminal dimerisation domain
SYNPCC7942_RS09045	SM01340	SYNPCC7942_RS09045
SYNPCC7942_RS09090	SM00271	DnaJ molecular chaperone homology domain
SYNPCC7942_RS09105	SM01004	Delta-aminolevulinic acid dehydratase
SYNPCC7942_RS09190	SM00849	Metallo-beta-lactamase superfamily
SYNPCC7942_RS09190	SM00903	Flavin reductase like domain
SYNPCC7942_RS09195	SM00849	Metallo-beta-lactamase superfamily
SYNPCC7942_RS09195	SM00903	Flavin reductase like domain
SYNPCC7942_RS09200	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SYNPCC7942_RS09200	SM00091	PAS domain
SYNPCC7942_RS09200	SM00267	diguanylate cyclase
SYNPCC7942_RS09205	SM00387	Histidine kinase-like ATPases
SYNPCC7942_RS09210	SM00100	Cyclic nucleotide-monophosphate binding domain
SYNPCC7942_RS09215	SM00388	His Kinase A (phosphoacceptor) domain
SYNPCC7942_RS09215	SM00448	cheY-homologous receiver domain
SYNPCC7942_RS09220	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SYNPCC7942_RS09220	SM00387	Histidine kinase-like ATPases
SYNPCC7942_RS09220	SM00388	His Kinase A (phosphoacceptor) domain
SYNPCC7942_RS09220	SM00448	cheY-homologous receiver domain
SYNPCC7942_RS09225	SM00448	cheY-homologous receiver domain
SYNPCC7942_RS09250	SM00567	E-Z type HEAT repeats
SYNPCC7942_RS09255	SM00116	Domain in cystathionine beta-synthase and other proteins.
SYNPCC7942_RS09290	SM01240	SYNPCC7942_RS09290
SYNPCC7942_RS09365	SM00849	Metallo-beta-lactamase superfamily
SYNPCC7942_RS09370	SM01130	SYNPCC7942_RS09370
SYNPCC7942_RS09375	SM00859	Semialdehyde dehydrogenase, NAD binding domain
SYNPCC7942_RS09430	SM00052	Putative diguanylate phosphodiesterase
SYNPCC7942_RS09430	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SYNPCC7942_RS09430	SM00091	PAS domain
SYNPCC7942_RS09430	SM00267	diguanylate cyclase
SYNPCC7942_RS09435	SM00421	helix_turn_helix, Lux Regulon
SYNPCC7942_RS09435	SM00448	cheY-homologous receiver domain
SYNPCC7942_RS09495	SM00387	Histidine kinase-like ATPases
SYNPCC7942_RS09495	SM00388	His Kinase A (phosphoacceptor) domain
SYNPCC7942_RS09500	SM00448	cheY-homologous receiver domain
SYNPCC7942_RS09500	SM00862	Transcriptional regulatory protein, C terminal
SYNPCC7942_RS09520	SM00460	Transglutaminase/protease-like homologues
SYNPCC7942_RS09595	SM00450	Rhodanese Homology Domain
SYNPCC7942_RS09600	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7942_RS09660	SM00100	Cyclic nucleotide-monophosphate binding domain
SYNPCC7942_RS09660	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7942_RS09690	SM00316	Ribosomal protein S1-like RNA-binding domain
SYNPCC7942_RS09690	SM00357	Cold shock protein domain
SYNPCC7942_RS09690	SM00955	SYNPCC7942_RS09690
SYNPCC7942_RS09740	SM00530	Helix-turn-helix XRE-family like proteins 
SYNPCC7942_RS09840	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
SYNPCC7942_RS09870	SM00465	GIY-YIG type nucleases (URI domain)
SYNPCC7942_RS09930	SM00100	Cyclic nucleotide-monophosphate binding domain
SYNPCC7942_RS10000	SM00028	Tetratricopeptide repeats
SYNPCC7942_RS10105	SM01007	Class II Aldolase and Adducin N-terminal domain
SYNPCC7942_RS10130	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SYNPCC7942_RS10135	SM00360	RNA recognition motif
SYNPCC7942_RS10140	SM00240	Forkhead associated domain
SYNPCC7942_RS10160	SM00754	A domain in the BMP inhibitor chordin and in microbial proteins.
SYNPCC7942_RS10185	SM00903	Flavin reductase like domain
SYNPCC7942_RS10200	SM00849	Metallo-beta-lactamase superfamily
SYNPCC7942_RS10260	SM00322	K homology RNA-binding domain
SYNPCC7942_RS10340	SM00530	Helix-turn-helix XRE-family like proteins 
SYNPCC7942_RS10375	SM00968	SMC proteins Flexible Hinge Domain
SYNPCC7942_RS10435	SM01207	SYNPCC7942_RS10435
SYNPCC7942_RS10495	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7942_RS10500	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7942_RS10510	SM00842	Cell division protein FtsA
SYNPCC7942_RS10515	SM00271	DnaJ molecular chaperone homology domain
SYNPCC7942_RS10535	SM00855	Phosphoglycerate mutase family
SYNPCC7942_RS10555	SM00838	Elongation factor G C-terminus
SYNPCC7942_RS10555	SM00889	Elongation factor G, domain IV
SYNPCC7942_RS10590	SM00756	SYNPCC7942_RS10590
SYNPCC7942_RS10615	SM00554	Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.
SYNPCC7942_RS10625	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SYNPCC7942_RS10625	SM00116	Domain in cystathionine beta-synthase and other proteins.
SYNPCC7942_RS10625	SM00267	diguanylate cyclase
SYNPCC7942_RS10665	SM01116	SYNPCC7942_RS10665
SYNPCC7942_RS10670	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7942_RS10690	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7942_RS10710	SM01400	SYNPCC7942_RS10710
SYNPCC7942_RS10715	SM00387	Histidine kinase-like ATPases
SYNPCC7942_RS10715	SM00388	His Kinase A (phosphoacceptor) domain
SYNPCC7942_RS10715	SM01248	SYNPCC7942_RS10715
SYNPCC7942_RS10745	SM00967	RNA 2'-O ribose methyltransferase substrate binding
SYNPCC7942_RS10750	SM00535	Ribonuclease III family
SYNPCC7942_RS10760	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
SYNPCC7942_RS10795	SM00930	SYNPCC7942_RS10795
SYNPCC7942_RS10825	SM00646	SYNPCC7942_RS10825
SYNPCC7942_RS10890	SM00318	Staphylococcal nuclease homologues
SYNPCC7942_RS10915	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7942_RS10955	SM01230	SYNPCC7942_RS10955
SYNPCC7942_RS11050	SM00419	helix_turn_helix, cAMP Regulatory protein
SYNPCC7942_RS11075	SM00046	Diacylglycerol kinase catalytic domain (presumed)
SYNPCC7942_RS11135	SM00267	diguanylate cyclase
SYNPCC7942_RS11140	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SYNPCC7942_RS11140	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SYNPCC7942_RS11150	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
SYNPCC7942_RS11150	SM01080	SYNPCC7942_RS11150
SYNPCC7942_RS11160	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
SYNPCC7942_RS11165	SM00933	SYNPCC7942_RS11165
SYNPCC7942_RS11170	SM00306	Hint (Hedgehog/Intein) domain N-terminal region
SYNPCC7942_RS11170	SM00481	DNA polymerase alpha chain like domain
SYNPCC7942_RS11185	SM01005	Alanine racemase, C-terminal domain
SYNPCC7942_RS11190	SM00507	HNH nucleases
SYNPCC7942_RS11195	SM00937	SYNPCC7942_RS11195
SYNPCC7942_RS11225	SM00662	RNA polymerases D
SYNPCC7942_RS11280	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
SYNPCC7942_RS11285	SM01374	SYNPCC7942_RS11285
SYNPCC7942_RS11305	SM00322	K homology RNA-binding domain
SYNPCC7942_RS11320	SM01382	SYNPCC7942_RS11320
SYNPCC7942_RS11320	SM01383	SYNPCC7942_RS11320
SYNPCC7942_RS11355	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7942_RS11380	SM00388	His Kinase A (phosphoacceptor) domain
SYNPCC7942_RS11410	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
SYNPCC7942_RS11410	SM00534	ATPase domain of DNA mismatch repair MUTS family
SYNPCC7942_RS11420	SM00411	bacterial (prokaryotic) histone like domain
SYNPCC7942_RS11505	SM00421	helix_turn_helix, Lux Regulon
SYNPCC7942_RS11555	SM00327	von Willebrand factor (vWF) type A domain
SYNPCC7942_RS11555	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7942_RS11590	SM00028	Tetratricopeptide repeats
SYNPCC7942_RS11600	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SYNPCC7942_RS11600	SM00387	Histidine kinase-like ATPases
SYNPCC7942_RS11600	SM00388	His Kinase A (phosphoacceptor) domain
SYNPCC7942_RS11645	SM00116	Domain in cystathionine beta-synthase and other proteins.
SYNPCC7942_RS11670	SM01230	SYNPCC7942_RS11670
SYNPCC7942_RS11680	SM00278	Helix-hairpin-helix DNA-binding motif class 1
SYNPCC7942_RS11685	SM01387	SYNPCC7942_RS11685
SYNPCC7942_RS11715	SM00448	cheY-homologous receiver domain
SYNPCC7942_RS11715	SM00862	Transcriptional regulatory protein, C terminal
SYNPCC7942_RS11720	SM00271	DnaJ molecular chaperone homology domain
SYNPCC7942_RS11765	SM00883	Chaperonin 10 Kd subunit
SYNPCC7942_RS11770	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7942_RS11790	SM00530	Helix-turn-helix XRE-family like proteins 
SYNPCC7942_RS11800	SM00028	Tetratricopeptide repeats
SYNPCC7942_RS11820	SM00567	E-Z type HEAT repeats
SYNPCC7942_RS11835	SM00028	Tetratricopeptide repeats
SYNPCC7942_RS11840	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SYNPCC7942_RS11845	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
SYNPCC7942_RS11845	SM00245	tail specific protease
SYNPCC7942_RS11875	SM00644	SYNPCC7942_RS11875
SYNPCC7942_RS11890	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7942_RS11935	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7942_RS11970	SM00419	helix_turn_helix, cAMP Regulatory protein
SYNPCC7942_RS11990	SM00646	SYNPCC7942_RS11990
SYNPCC7942_RS12060	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
SYNPCC7942_RS12065	SM00729	Elongator protein 3, MiaB family, Radical SAM
SYNPCC7942_RS12085	SM00864	Tubulin/FtsZ family, GTPase domain
SYNPCC7942_RS12085	SM00865	Tubulin/FtsZ family, C-terminal domain
SYNPCC7942_RS12105	SM00729	Elongator protein 3, MiaB family, Radical SAM
SYNPCC7942_RS12110	SM00670	Large family of predicted nucleotide-binding domains
SYNPCC7942_RS12115	SM00890	Domain of unknown function
SYNPCC7942_RS12135	SM00835	Cupin
SYNPCC7942_RS12140	SM00271	DnaJ molecular chaperone homology domain
SYNPCC7942_RS12185	SM00732	Likely ribonuclease with RNase H fold.
SYNPCC7942_RS12245	SM00788	Adenylosuccinate synthetase
SYNPCC7942_RS12260	SM00244	prohibitin homologues
SYNPCC7942_RS12275	SM00448	cheY-homologous receiver domain
SYNPCC7942_RS12275	SM00862	Transcriptional regulatory protein, C terminal
SYNPCC7942_RS12310	SM01228	SYNPCC7942_RS12310
SYNPCC7942_RS12330	SM00450	Rhodanese Homology Domain
SYNPCC7942_RS12400	SM00316	Ribosomal protein S1-like RNA-binding domain
SYNPCC7942_RS12400	SM00322	K homology RNA-binding domain
SYNPCC7942_RS12405	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7942_RS12535	SM00448	cheY-homologous receiver domain
SYNPCC7942_RS12535	SM00862	Transcriptional regulatory protein, C terminal
SYNPCC7942_RS12565	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7942_RS12565	SM00962	SRP54-type protein, GTPase domain
SYNPCC7942_RS12565	SM00963	SRP54-type protein, helical bundle domain
SYNPCC7942_RS12570	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SYNPCC7942_RS12570	SM00331	Sigma factor PP2C-like phosphatases
SYNPCC7942_RS12600	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
SYNPCC7942_RS12640	SM00387	Histidine kinase-like ATPases
SYNPCC7942_RS12640	SM00433	TopoisomeraseII
SYNPCC7942_RS12645	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7942_RS12650	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7942_RS12670	SM00562	SYNPCC7942_RS12670
SYNPCC7942_RS12675	SM00244	prohibitin homologues
SYNPCC7942_RS12680	SM00244	prohibitin homologues
SYNPCC7942_RS12745	SM00729	Elongator protein 3, MiaB family, Radical SAM
SYNPCC7942_RS12790	SM00052	Putative diguanylate phosphodiesterase
SYNPCC7942_RS12790	SM00267	diguanylate cyclase
SYNPCC7942_RS12800	SM00670	Large family of predicted nucleotide-binding domains
SYNPCC7942_RS12825	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7942_RS12825	SM00994	ClpX C4-type zinc finger
SYNPCC7942_RS12825	SM01086	C-terminal, D2-small domain, of ClpB protein
SYNPCC7942_RS12865	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SYNPCC7942_RS12865	SM00267	diguanylate cyclase
SYNPCC7942_RS12870	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SYNPCC7942_RS12870	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SYNPCC7942_RS12870	SM00091	PAS domain
SYNPCC7942_RS12870	SM00267	diguanylate cyclase
SYNPCC7942_RS12875	SM00028	Tetratricopeptide repeats
SYNPCC7942_RS12875	SM00271	DnaJ molecular chaperone homology domain
SYNPCC7942_RS12920	SM00986	Uracil DNA glycosylase superfamily
SYNPCC7942_RS12920	SM00987	UreE urease accessory protein, C-terminal domain 
SYNPCC7942_RS12995	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
SYNPCC7942_RS13035	SM00841	Elongation factor P, C-terminal
SYNPCC7942_RS13035	SM01185	SYNPCC7942_RS13035
SYNPCC7942_RS13055	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
SYNPCC7942_RS13080	SM00382	ATPases associated with a variety of cellular activities
SYNPCC7942_RS13130	SM00271	DnaJ molecular chaperone homology domain
SYNPCC7942_RS13220	SM01091	Transporter associated domain
SYNPCC7942_RS13230	SM01118	SYNPCC7942_RS13230
SYNPCC7942_RS13275	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
