locus-tag	class	description
UTEX3055_RS00005	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
UTEX3055_RS00010	COG2226	methyltransferase
UTEX3055_RS00015	COG4399	Belongs to the UPF0754 family
UTEX3055_RS00020	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
UTEX3055_RS00035	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
UTEX3055_RS00055	COG0542	response to heat
UTEX3055_RS00060	COG3794	PFAM blue (type 1) copper domain protein
UTEX3055_RS00070	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
UTEX3055_RS00075	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
UTEX3055_RS00085	COG1215	transferase activity, transferring glycosyl groups
UTEX3055_RS00090	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
UTEX3055_RS00095	COG0569	domain protein
UTEX3055_RS00100	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
UTEX3055_RS00105	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
UTEX3055_RS00135	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
UTEX3055_RS00160	COG0508	dehydrogenase complex catalyzes the overall conversion of
UTEX3055_RS00195	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
UTEX3055_RS00210	COG0352	thiamine-phosphate diphosphorylase activity
UTEX3055_RS00220	COG1413	lyase activity
UTEX3055_RS00225	COG1413	lyase activity
UTEX3055_RS00240	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
UTEX3055_RS00245	COG0237	dephospho-CoA kinase activity
UTEX3055_RS00250	COG0237	dephospho-CoA kinase activity
UTEX3055_RS00270	COG2385	sporulation resulting in formation of a cellular spore
UTEX3055_RS00280	COG0170	dolichyl monophosphate biosynthetic process
UTEX3055_RS00305	COG1166	arginine decarboxylase activity
UTEX3055_RS00330	COG2308	Evidence 4 Homologs of previously reported genes of
UTEX3055_RS00335	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
UTEX3055_RS00340	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
UTEX3055_RS00345	COG0596	Alpha beta hydrolase
UTEX3055_RS00350	COG2052	Domain of unknown function (DUF370)
UTEX3055_RS00355	COG1293	RNA-binding protein homologous to eukaryotic snRNP
UTEX3055_RS00365	COG0464	growth
UTEX3055_RS00385	COG0318	PFAM AMP-dependent synthetase and ligase
UTEX3055_RS00390	COG4948	Mandelate Racemase Muconate Lactonizing
UTEX3055_RS00395	COG1640	4-alpha-glucanotransferase
UTEX3055_RS00405	COG0217	transcriptional regulatory protein
UTEX3055_RS00415	COG0840	transmembrane signaling receptor activity
UTEX3055_RS00430	COG0745	RESPONSE REGULATOR receiver
UTEX3055_RS00435	COG5002	protein histidine kinase activity
UTEX3055_RS00440	COG1187	pseudouridine synthase activity
UTEX3055_RS00450	COG0788	formyltetrahydrofolate deformylase activity
UTEX3055_RS00455	COG0114	fumarate hydratase activity
UTEX3055_RS00470	COG1011	Hydrolase
UTEX3055_RS00480	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
UTEX3055_RS00505	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
UTEX3055_RS00510	COG0333	Belongs to the bacterial ribosomal protein bL32 family
UTEX3055_RS00515	COG0572	uridine kinase
UTEX3055_RS00530	COG1160	GTP binding
UTEX3055_RS00560	COG0735	belongs to the Fur family
UTEX3055_RS00570	COG2814	Major facilitator Superfamily
UTEX3055_RS00575	COG1381	Involved in DNA repair and RecF pathway recombination
UTEX3055_RS00580	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
UTEX3055_RS00600	COG1280	lysine exporter protein (LysE YggA)
UTEX3055_RS00615	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
UTEX3055_RS00620	COG0572	uridine kinase
UTEX3055_RS00625	COG0617	tRNA 3'-terminal CCA addition
UTEX3055_RS00625	COG0517	IMP dehydrogenase activity
UTEX3055_RS00625	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
UTEX3055_RS00630	COG0275	rRNA processing
UTEX3055_RS00635	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
UTEX3055_RS00640	COG0251	oxidation-reduction process
UTEX3055_RS00655	COG0412	Dienelactone hydrolase
UTEX3055_RS00665	COG0181	hydroxymethylbilane synthase activity
UTEX3055_RS00690	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
UTEX3055_RS00690	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
UTEX3055_RS00695	COG1316	TRANSCRIPTIONal
UTEX3055_RS00700	COG3842	ATPase activity
UTEX3055_RS00705	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
UTEX3055_RS00710	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
UTEX3055_RS00720	COG0523	cobalamin synthesis protein
UTEX3055_RS00730	COG0354	folic acid binding
UTEX3055_RS00745	COG0157	Belongs to the NadC ModD family
UTEX3055_RS00750	COG1653	transport
UTEX3055_RS00765	COG3842	ATPase activity
UTEX3055_RS00770	COG1231	oxidoreductase activity
UTEX3055_RS00780	COG0285	dihydrofolate synthase activity
UTEX3055_RS00785	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
UTEX3055_RS00790	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
UTEX3055_RS00795	COG0488	(ABC) transporter
UTEX3055_RS00805	COG0529	Catalyzes the synthesis of activated sulfate
UTEX3055_RS00815	COG3453	Protein conserved in bacteria
UTEX3055_RS00815	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
UTEX3055_RS00820	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
UTEX3055_RS00830	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
UTEX3055_RS00840	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
UTEX3055_RS00845	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
UTEX3055_RS00850	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
UTEX3055_RS00855	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
UTEX3055_RS00860	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
UTEX3055_RS00865	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
UTEX3055_RS00875	COG0151	Belongs to the GarS family
UTEX3055_RS00880	COG5002	protein histidine kinase activity
UTEX3055_RS00885	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
UTEX3055_RS00890	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
UTEX3055_RS00910	COG1022	Amp-dependent synthetase and ligase
UTEX3055_RS00915	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
UTEX3055_RS00935	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
UTEX3055_RS00950	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
UTEX3055_RS00965	COG0316	Belongs to the HesB IscA family
UTEX3055_RS00995	COG1049	propionate catabolic process, 2-methylcitrate cycle
UTEX3055_RS01025	COG3411	Ferredoxin
UTEX3055_RS01030	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
UTEX3055_RS01035	COG2894	cell division
UTEX3055_RS01045	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
UTEX3055_RS01055	COG1060	Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate
UTEX3055_RS01065	COG0070	glutamate synthase
UTEX3055_RS01065	COG0069	glutamate synthase activity
UTEX3055_RS01065	COG0067	glutamate synthase
UTEX3055_RS01080	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
UTEX3055_RS01085	COG0049	tRNA binding
UTEX3055_RS01090	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
UTEX3055_RS01095	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
UTEX3055_RS01100	COG0051	transcription antitermination factor activity, RNA binding
UTEX3055_RS01110	COG0077	Prephenate dehydratase
UTEX3055_RS01120	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
UTEX3055_RS01125	COG1530	ribonuclease E activity
UTEX3055_RS01130	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
UTEX3055_RS01135	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
UTEX3055_RS01145	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
UTEX3055_RS01175	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
UTEX3055_RS01190	COG1666	GTP binding
UTEX3055_RS01200	COG0857	belongs to the CobB CobQ family
UTEX3055_RS01210	COG3000	fatty acid hydroxylase
UTEX3055_RS01210	COG0300	oxidoreductase activity
UTEX3055_RS01220	COG0643	Histidine kinase
UTEX3055_RS01220	COG2198	Histidine kinase
UTEX3055_RS01220	COG0784	Response regulator, receiver
UTEX3055_RS01225	COG0840	transmembrane signaling receptor activity
UTEX3055_RS01225	COG2203	Gaf domain
UTEX3055_RS01240	COG0784	Response regulator, receiver
UTEX3055_RS01250	COG0436	Aminotransferase
UTEX3055_RS01260	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
UTEX3055_RS01270	COG1981	membrane
UTEX3055_RS01275	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
UTEX3055_RS01280	COG2805	Type II/IV secretion system protein
UTEX3055_RS01300	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
UTEX3055_RS01305	COG2072	flavoprotein involved in K transport
UTEX3055_RS01330	COG2144	transferase activity, transferring acyl groups
UTEX3055_RS01335	COG2255	four-way junction helicase activity
UTEX3055_RS01360	COG0017	Asparaginyl-tRNA synthetase
UTEX3055_RS01415	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
UTEX3055_RS01415	COG0392	lysyltransferase activity
UTEX3055_RS01420	COG0628	permease
UTEX3055_RS01425	COG0601	transmembrane transport
UTEX3055_RS01430	COG4166	transmembrane transport
UTEX3055_RS01440	COG0047	phosphoribosylformylglycinamidine synthase activity
UTEX3055_RS01445	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
UTEX3055_RS01450	COG0735	belongs to the Fur family
UTEX3055_RS01455	COG5001	Diguanylate cyclase
UTEX3055_RS01455	COG3300	MHYT domain
UTEX3055_RS01465	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
UTEX3055_RS01470	COG3705	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
UTEX3055_RS01475	COG0484	heat shock protein binding
UTEX3055_RS01495	COG0438	transferase activity, transferring glycosyl groups
UTEX3055_RS01505	COG1385	rRNA (uridine-N3-)-methyltransferase activity
UTEX3055_RS01515	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
UTEX3055_RS01530	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
UTEX3055_RS01545	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
UTEX3055_RS01565	COG1842	Phage shock protein A
UTEX3055_RS01575	COG0617	tRNA 3'-terminal CCA addition
UTEX3055_RS01590	COG0625	glutathione transferase activity
UTEX3055_RS01610	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
UTEX3055_RS01615	COG1132	(ABC) transporter
UTEX3055_RS01620	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
UTEX3055_RS01620	COG0574	Belongs to the PEP-utilizing enzyme family
UTEX3055_RS01625	COG0515	serine threonine protein kinase
UTEX3055_RS01625	COG1357	PFAM Pentapeptide repeats (8 copies)
UTEX3055_RS01630	COG1480	7TM receptor with intracellular HD hydrolase
UTEX3055_RS01640	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
UTEX3055_RS01645	COG0142	geranyltranstransferase activity
UTEX3055_RS01660	COG0454	-acetyltransferase
UTEX3055_RS01675	COG0737	Belongs to the 5'-nucleotidase family
UTEX3055_RS01680	COG2319	Wd-40 repeat
UTEX3055_RS01700	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
UTEX3055_RS01715	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
UTEX3055_RS01720	COG0793	Belongs to the peptidase S41A family
UTEX3055_RS01725	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
UTEX3055_RS01740	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
UTEX3055_RS01745	COG1982	Orn Lys Arg decarboxylase major
UTEX3055_RS01765	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
UTEX3055_RS01765	COG0758	DNA mediated transformation
UTEX3055_RS01775	COG0824	Thioesterase
UTEX3055_RS01780	COG0589	response to stress
UTEX3055_RS01805	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
UTEX3055_RS01810	COG0539	negative regulation of cytoplasmic translation
UTEX3055_RS01830	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
UTEX3055_RS01840	COG0640	Transcriptional regulator
UTEX3055_RS01850	COG1060	Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate
UTEX3055_RS01860	COG0459	protein refolding
UTEX3055_RS01865	COG1028	Short-chain dehydrogenase reductase Sdr
UTEX3055_RS01870	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
UTEX3055_RS01880	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
UTEX3055_RS01890	COG0724	RNA recognition motif
UTEX3055_RS01920	COG0408	coproporphyrinogen oxidase activity
UTEX3055_RS01930	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
UTEX3055_RS01940	COG0540	Belongs to the ATCase OTCase family
UTEX3055_RS01945	COG2094	Belongs to the DNA glycosylase MPG family
UTEX3055_RS01965	COG3264	Mechanosensitive ion channel
UTEX3055_RS01965	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
UTEX3055_RS01985	COG0287	Prephenate dehydrogenase
UTEX3055_RS02020	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
UTEX3055_RS02030	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
UTEX3055_RS02040	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
UTEX3055_RS02055	COG1376	ErfK ybiS ycfS ynhG family protein
UTEX3055_RS02065	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
UTEX3055_RS02070	COG2202	Pas domain
UTEX3055_RS02070	COG2205	protein histidine kinase activity
UTEX3055_RS02080	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
UTEX3055_RS02085	COG1053	succinate dehydrogenase
UTEX3055_RS02090	COG1132	(ABC) transporter
UTEX3055_RS02095	COG0148	phosphopyruvate hydratase activity
UTEX3055_RS02100	COG0346	lactoylglutathione lyase activity
UTEX3055_RS02105	COG0542	response to heat
UTEX3055_RS02110	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
UTEX3055_RS02115	COG0250	Participates in transcription elongation, termination and antitermination
UTEX3055_RS02120	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
UTEX3055_RS02125	COG0081	regulation of translation
UTEX3055_RS02130	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
UTEX3055_RS02135	COG0222	ribosome binding
UTEX3055_RS02150	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
UTEX3055_RS02165	COG0129	dihydroxy-acid dehydratase activity
UTEX3055_RS02170	COG3854	ATPases associated with a variety of cellular activities
UTEX3055_RS02180	COG0492	ferredoxin-NADP+ reductase activity
UTEX3055_RS02185	COG4178	(ABC) transporter
UTEX3055_RS02200	COG0586	Pfam SNARE associated Golgi protein
UTEX3055_RS02205	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
UTEX3055_RS02215	COG1420	regulation of RNA biosynthetic process
UTEX3055_RS02220	COG1054	Belongs to the UPF0176 family
UTEX3055_RS02230	COG2062	phosphohistidine phosphatase, SixA
UTEX3055_RS02235	COG0372	Belongs to the citrate synthase family
UTEX3055_RS02240	COG1193	negative regulation of DNA recombination
UTEX3055_RS02245	COG0668	transmembrane transport
UTEX3055_RS02255	COG1791	Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway
UTEX3055_RS02265	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
UTEX3055_RS02270	COG3781	membrane
UTEX3055_RS02275	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
UTEX3055_RS02280	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
UTEX3055_RS02290	COG0515	serine threonine protein kinase
UTEX3055_RS02315	COG2226	methyltransferase
UTEX3055_RS02335	COG0205	6-phosphofructokinase activity
UTEX3055_RS02340	COG2119	membrane
UTEX3055_RS02360	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
UTEX3055_RS02365	COG0525	valine-tRNA ligase activity
UTEX3055_RS02395	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
UTEX3055_RS02400	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
UTEX3055_RS02405	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
UTEX3055_RS02410	COG1239	Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX
UTEX3055_RS02415	COG0429	hydrolase of the alpha beta-hydrolase fold
UTEX3055_RS02425	COG0768	penicillin binding
UTEX3055_RS02445	COG2022	thiamine diphosphate biosynthetic process
UTEX3055_RS02575	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
UTEX3055_RS02650	COG1555	photosystem II stabilization
UTEX3055_RS02705	COG0783	Belongs to the Dps family
UTEX3055_RS03040	COG0346	lactoylglutathione lyase activity
UTEX3055_RS03045	COG2211	Major facilitator Superfamily
UTEX3055_RS03050	COG0587	DNA-directed DNA polymerase activity
UTEX3055_RS03055	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
UTEX3055_RS03060	COG0402	S-adenosylhomocysteine deaminase activity
UTEX3055_RS03065	COG0277	FAD linked oxidase domain protein
UTEX3055_RS03080	COG1136	(ABC) transporter
UTEX3055_RS03085	COG0556	nucleotide-excision repair
UTEX3055_RS03100	COG1122	ATPase activity
UTEX3055_RS03105	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
UTEX3055_RS03120	COG0745	RESPONSE REGULATOR receiver
UTEX3055_RS03130	COG0012	GTP binding
UTEX3055_RS03135	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
UTEX3055_RS03155	COG0861	Integral membrane protein TerC family
UTEX3055_RS03170	COG0475	glutathione-regulated potassium exporter activity
UTEX3055_RS03190	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
UTEX3055_RS03210	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
UTEX3055_RS03215	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
UTEX3055_RS03220	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
UTEX3055_RS03225	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
UTEX3055_RS03230	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
UTEX3055_RS03255	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
UTEX3055_RS03260	COG0363	glucosamine-6-phosphate deaminase activity
UTEX3055_RS03275	COG1175	transmembrane transport
UTEX3055_RS03280	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
UTEX3055_RS03310	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
UTEX3055_RS03320	COG0628	permease
UTEX3055_RS03325	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
UTEX3055_RS03325	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
UTEX3055_RS03330	COG0793	Belongs to the peptidase S41A family
UTEX3055_RS03355	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
UTEX3055_RS03370	COG0644	oxidoreductase
UTEX3055_RS03375	COG0233	cytoplasmic translational termination
UTEX3055_RS03380	COG0528	UMP kinase activity
UTEX3055_RS03385	COG1494	fructose-1,6-bisphosphatase
UTEX3055_RS03390	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
UTEX3055_RS03405	COG0702	epimerase
UTEX3055_RS03420	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
UTEX3055_RS03445	COG0196	riboflavin kinase activity
UTEX3055_RS03455	COG5001	Diguanylate cyclase
UTEX3055_RS03455	COG3300	MHYT domain
UTEX3055_RS03460	COG1012	belongs to the aldehyde dehydrogenase family
UTEX3055_RS03465	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
UTEX3055_RS03475	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
UTEX3055_RS03480	COG0406	alpha-ribazole phosphatase activity
UTEX3055_RS03495	COG0768	penicillin binding
UTEX3055_RS03500	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
UTEX3055_RS03510	COG0481	GTPase activity
UTEX3055_RS03515	COG0681	Belongs to the peptidase S26 family
UTEX3055_RS03520	COG0762	integral membrane protein
UTEX3055_RS03525	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
UTEX3055_RS03535	COG1902	pentaerythritol trinitrate reductase activity
UTEX3055_RS03540	COG1722	exodeoxyribonuclease VII activity
UTEX3055_RS03545	COG0395	ABC-type sugar transport system, permease component
UTEX3055_RS03555	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
UTEX3055_RS03580	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
UTEX3055_RS03585	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
UTEX3055_RS03600	COG0456	acetyltransferase
UTEX3055_RS03605	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
UTEX3055_RS03625	COG0343	queuine tRNA-ribosyltransferase activity
UTEX3055_RS03630	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
UTEX3055_RS03635	COG2205	protein histidine kinase activity
UTEX3055_RS03650	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
UTEX3055_RS03655	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
UTEX3055_RS03660	COG0750	zinc metalloprotease
UTEX3055_RS03665	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
UTEX3055_RS03670	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
UTEX3055_RS03675	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
UTEX3055_RS03685	COG1361	Conserved repeat domain
UTEX3055_RS03690	COG0004	ammonium transporteR
UTEX3055_RS03695	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
UTEX3055_RS03700	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
UTEX3055_RS03705	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
UTEX3055_RS03725	COG1403	HNH endonuclease
UTEX3055_RS03735	COG0701	Predicted permease
UTEX3055_RS03750	COG2173	Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
UTEX3055_RS03760	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
UTEX3055_RS03770	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
UTEX3055_RS03775	COG1131	(ABC) transporter
UTEX3055_RS03805	COG3788	relative of glutathione S-transferase, MAPEG superfamily
UTEX3055_RS03815	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
UTEX3055_RS03855	COG0159	tryptophan synthase activity
UTEX3055_RS03870	COG0135	phosphoribosylanthranilate isomerase activity
UTEX3055_RS03900	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
UTEX3055_RS03905	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
UTEX3055_RS03910	COG0512	Glutamine amidotransferase of anthranilate synthase
UTEX3055_RS03930	COG0138	bifunctional purine biosynthesis protein purh
UTEX3055_RS03940	COG0575	Belongs to the CDS family
UTEX3055_RS03950	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
UTEX3055_RS03970	COG0438	transferase activity, transferring glycosyl groups
UTEX3055_RS03975	COG0802	atpase or kinase
UTEX3055_RS03980	COG0391	Required for morphogenesis under gluconeogenic growth conditions
UTEX3055_RS03985	COG0644	oxidoreductase
UTEX3055_RS04025	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
UTEX3055_RS04035	COG0612	Peptidase, M16
UTEX3055_RS04040	COG0612	Peptidase, M16
UTEX3055_RS04050	COG2850	peptidyl-arginine hydroxylation
UTEX3055_RS04060	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
UTEX3055_RS04070	COG1231	oxidoreductase activity
UTEX3055_RS04080	COG0385	Bile acid
UTEX3055_RS04120	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
UTEX3055_RS04125	COG0220	tRNA (guanine-N7-)-methyltransferase activity
UTEX3055_RS04145	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
UTEX3055_RS04150	COG1472	Belongs to the glycosyl hydrolase 3 family
UTEX3055_RS04165	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
UTEX3055_RS04175	COG1127	ABC transporter
UTEX3055_RS04185	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
UTEX3055_RS04190	COG1496	oxidoreductase activity
UTEX3055_RS04195	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
UTEX3055_RS04195	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
UTEX3055_RS04225	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
UTEX3055_RS04235	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
UTEX3055_RS04240	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
UTEX3055_RS04245	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
UTEX3055_RS04250	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
UTEX3055_RS04255	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
UTEX3055_RS04260	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
UTEX3055_RS04265	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
UTEX3055_RS04270	COG0356	it plays a direct role in the translocation of protons across the membrane
UTEX3055_RS04280	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
UTEX3055_RS04285	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
UTEX3055_RS04305	COG0772	Belongs to the SEDS family
UTEX3055_RS04310	COG4232	protein-disulfide reductase activity
UTEX3055_RS04315	COG1333	cytochrome c biogenesis protein
UTEX3055_RS04320	COG0347	Belongs to the P(II) protein family
UTEX3055_RS04325	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
UTEX3055_RS04330	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
UTEX3055_RS04350	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
UTEX3055_RS04365	COG0792	nuclease activity
UTEX3055_RS04370	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
UTEX3055_RS04375	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
UTEX3055_RS04380	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
UTEX3055_RS04390	COG0475	glutathione-regulated potassium exporter activity
UTEX3055_RS04390	COG0589	response to stress
UTEX3055_RS04415	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
UTEX3055_RS04420	COG0629	single-stranded DNA binding
UTEX3055_RS04425	COG1077	Cell shape determining protein MreB Mrl
UTEX3055_RS04430	COG1792	Involved in formation and maintenance of cell shape
UTEX3055_RS04440	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
UTEX3055_RS04450	COG2046	Belongs to the sulfate adenylyltransferase family
UTEX3055_RS04465	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
UTEX3055_RS04470	COG3536	Protein conserved in bacteria
UTEX3055_RS04480	COG0167	dihydroorotate dehydrogenase activity
UTEX3055_RS04485	COG0653	protein targeting
UTEX3055_RS04490	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
UTEX3055_RS04495	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
UTEX3055_RS04505	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
UTEX3055_RS04510	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
UTEX3055_RS04515	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
UTEX3055_RS04520	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
UTEX3055_RS04525	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
UTEX3055_RS04530	COG1058	Belongs to the CinA family
UTEX3055_RS04530	COG1546	Belongs to the CinA family
UTEX3055_RS04545	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
UTEX3055_RS04550	COG0277	FAD linked oxidase domain protein
UTEX3055_RS04555	COG2361	Protein of unknown function DUF86
UTEX3055_RS04565	COG0237	dephospho-CoA kinase activity
UTEX3055_RS04570	COG1587	Uroporphyrinogen-III synthase
UTEX3055_RS04575	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
UTEX3055_RS04580	COG0463	Glycosyl transferase, family 2
UTEX3055_RS04580	COG0457	Tetratricopeptide repeat
UTEX3055_RS04595	COG0357	Ribosomal RNA small subunit methyltransferase G
UTEX3055_RS04600	COG0484	heat shock protein binding
UTEX3055_RS04610	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
UTEX3055_RS04615	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
UTEX3055_RS04620	COG0019	diaminopimelate decarboxylase activity
UTEX3055_RS04625	COG0456	acetyltransferase
UTEX3055_RS04630	COG0542	response to heat
UTEX3055_RS04645	COG1836	PFAM Integral membrane protein DUF92
UTEX3055_RS04650	COG1473	amidohydrolase
UTEX3055_RS04660	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
UTEX3055_RS04685	COG1126	abc transporter atp-binding protein
UTEX3055_RS04690	COG0765	amino acid transport
UTEX3055_RS04695	COG4597	amino acid ABC transporter
UTEX3055_RS04700	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
UTEX3055_RS04705	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
UTEX3055_RS04710	COG0058	SHG alpha-glucan phosphorylase activity
UTEX3055_RS04715	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
UTEX3055_RS04725	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
UTEX3055_RS04735	COG2010	Cytochrome c
UTEX3055_RS04750	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
UTEX3055_RS04770	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
UTEX3055_RS04795	COG0193	aminoacyl-tRNA hydrolase activity
UTEX3055_RS04800	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
UTEX3055_RS04825	COG0837	glucose binding
UTEX3055_RS04840	COG2710	Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein
UTEX3055_RS04850	COG0546	phosphoglycolate phosphatase activity
UTEX3055_RS04875	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
UTEX3055_RS04880	COG1492	cobalamin metabolic process
UTEX3055_RS04890	COG0424	maF-like protein
UTEX3055_RS04905	COG1051	belongs to the nudix hydrolase family
UTEX3055_RS04905	COG1056	cytidyltransferase-related domain
UTEX3055_RS04915	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
UTEX3055_RS04915	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
UTEX3055_RS04920	COG3278	Belongs to the heme-copper respiratory oxidase family
UTEX3055_RS04945	COG2211	Major facilitator Superfamily
UTEX3055_RS04950	COG3670	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
UTEX3055_RS04960	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
UTEX3055_RS04960	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
UTEX3055_RS04980	COG1903	Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A
UTEX3055_RS04985	COG0519	Catalyzes the synthesis of GMP from XMP
UTEX3055_RS04985	COG0518	GMP synthase (glutamine-hydrolyzing) activity
UTEX3055_RS04990	COG1366	Belongs to the anti-sigma-factor antagonist family
UTEX3055_RS04995	COG1253	flavin adenine dinucleotide binding
UTEX3055_RS05005	COG0405	Gamma-glutamyltransferase
UTEX3055_RS05010	COG0306	phosphate transporter
UTEX3055_RS05035	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
UTEX3055_RS05060	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
UTEX3055_RS05115	COG0799	negative regulation of ribosome biogenesis
UTEX3055_RS05135	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
UTEX3055_RS05155	COG0033	Phosphoglucomutase
UTEX3055_RS05175	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
UTEX3055_RS05185	COG0463	Glycosyl transferase, family 2
UTEX3055_RS05190	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
UTEX3055_RS05220	COG0508	dehydrogenase complex catalyzes the overall conversion of
UTEX3055_RS05220	COG0022	dehydrogenase e1 component
UTEX3055_RS05225	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
UTEX3055_RS05230	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
UTEX3055_RS05240	COG0028	Belongs to the TPP enzyme family
UTEX3055_RS05250	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
UTEX3055_RS05255	COG0582	viral genome integration into host DNA
UTEX3055_RS05260	COG2226	methyltransferase
UTEX3055_RS05295	COG4372	Transposase
UTEX3055_RS05300	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
UTEX3055_RS05305	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
UTEX3055_RS05310	COG0131	Imidazoleglycerol-phosphate dehydratase
UTEX3055_RS05315	COG0500	methyltransferase
UTEX3055_RS05325	COG4943	cyclic-guanylate-specific phosphodiesterase activity
UTEX3055_RS05340	COG0590	tRNA wobble adenosine to inosine editing
UTEX3055_RS05355	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
UTEX3055_RS05385	COG0415	Belongs to the DNA photolyase family
UTEX3055_RS05390	COG0443	Heat shock 70 kDa protein
UTEX3055_RS05400	COG0783	Belongs to the Dps family
UTEX3055_RS05410	COG1160	GTP binding
UTEX3055_RS05415	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
UTEX3055_RS05420	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
UTEX3055_RS05420	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
UTEX3055_RS05440	COG1252	NADH dehydrogenase
UTEX3055_RS05455	COG0469	pyruvate kinase activity
UTEX3055_RS05470	COG0745	RESPONSE REGULATOR receiver
UTEX3055_RS05475	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
UTEX3055_RS05480	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
UTEX3055_RS05495	COG1725	Transcriptional regulator
UTEX3055_RS05500	COG0412	Dienelactone hydrolase
UTEX3055_RS05545	COG1132	(ABC) transporter
UTEX3055_RS05550	COG2501	S4 domain
UTEX3055_RS05555	COG0577	efflux transmembrane transporter activity
UTEX3055_RS05555	COG1136	(ABC) transporter
UTEX3055_RS05560	COG0629	single-stranded DNA binding
UTEX3055_RS05565	COG0432	Pfam Uncharacterised protein family UPF0047
UTEX3055_RS05580	COG0006	proline dipeptidase activity
UTEX3055_RS05590	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
UTEX3055_RS05615	COG1131	(ABC) transporter
UTEX3055_RS05630	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
UTEX3055_RS05665	COG0463	Glycosyl transferase, family 2
UTEX3055_RS05670	COG4969	Belongs to the N-Me-Phe pilin family
UTEX3055_RS05680	COG4106	trans-aconitate 2-methyltransferase activity
UTEX3055_RS05710	COG0227	Belongs to the bacterial ribosomal protein bL28 family
UTEX3055_RS05715	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
UTEX3055_RS05720	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
UTEX3055_RS05725	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
UTEX3055_RS05730	COG1051	belongs to the nudix hydrolase family
UTEX3055_RS05755	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
UTEX3055_RS05760	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
UTEX3055_RS05760	COG4106	trans-aconitate 2-methyltransferase activity
UTEX3055_RS05765	COG4106	trans-aconitate 2-methyltransferase activity
UTEX3055_RS05775	COG0156	8-amino-7-oxononanoate synthase activity
UTEX3055_RS05825	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
UTEX3055_RS05830	COG0751	glycine-tRNA ligase activity
UTEX3055_RS05835	COG0800	Aldolase
UTEX3055_RS05860	COG3128	pkhd-type hydroxylase
UTEX3055_RS05875	COG0360	Binds together with S18 to 16S ribosomal RNA
UTEX3055_RS05885	COG0586	Pfam SNARE associated Golgi protein
UTEX3055_RS05890	COG0137	argininosuccinate synthase activity
UTEX3055_RS05915	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
UTEX3055_RS05920	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
UTEX3055_RS05930	COG0592	DNA-directed DNA polymerase activity
UTEX3055_RS05935	COG0546	phosphoglycolate phosphatase activity
UTEX3055_RS05940	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
UTEX3055_RS05950	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
UTEX3055_RS05970	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
UTEX3055_RS05980	COG1845	cytochrome c oxidase, subunit III
UTEX3055_RS05990	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
UTEX3055_RS05995	COG1612	heme a metabolic process
UTEX3055_RS06000	COG0109	protoheme IX farnesyltransferase activity
UTEX3055_RS06015	COG2954	triphosphatase activity
UTEX3055_RS06020	COG0673	inositol 2-dehydrogenase activity
UTEX3055_RS06025	COG1253	flavin adenine dinucleotide binding
UTEX3055_RS06045	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
UTEX3055_RS06060	COG2045	Belongs to the ComB family
UTEX3055_RS06065	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
UTEX3055_RS06080	COG1959	2 iron, 2 sulfur cluster binding
UTEX3055_RS06095	COG0483	inositol monophosphate 1-phosphatase activity
UTEX3055_RS06100	COG0633	Ferredoxin
UTEX3055_RS06110	COG0443	Heat shock 70 kDa protein
UTEX3055_RS06115	COG0484	heat shock protein binding
UTEX3055_RS06125	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
UTEX3055_RS06160	COG0803	Belongs to the bacterial solute-binding protein 9 family
UTEX3055_RS06165	COG1121	(ABC) transporter
UTEX3055_RS06170	COG1108	ABC-type Mn2 Zn2 transport systems permease components
UTEX3055_RS06180	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
UTEX3055_RS06185	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
UTEX3055_RS06190	COG0284	orotidine-5'-phosphate decarboxylase activity
UTEX3055_RS06200	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
UTEX3055_RS06205	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
UTEX3055_RS06210	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
UTEX3055_RS06215	COG0511	ligase activity, forming carbon-carbon bonds
UTEX3055_RS06220	COG0419	ATPase involved in DNA repair
UTEX3055_RS06225	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
UTEX3055_RS06240	COG0359	binds to the 23S rRNA
UTEX3055_RS06245	COG1104	cysteine desulfurase activity
UTEX3055_RS06255	COG1941	NADH ubiquinone oxidoreductase 20 kDa subunit
UTEX3055_RS06270	COG0375	protein maturation
UTEX3055_RS06275	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
UTEX3055_RS06280	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
UTEX3055_RS06285	COG0298	carbon dioxide binding
UTEX3055_RS06300	COG0066	3-isopropylmalate dehydratase activity
UTEX3055_RS06315	COG0436	Aminotransferase
UTEX3055_RS06325	COG1573	uracil-dna glycosylase
UTEX3055_RS06330	COG2010	Cytochrome c
UTEX3055_RS06345	COG0335	large ribosomal subunit rRNA binding
UTEX3055_RS06355	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
UTEX3055_RS06360	COG0740	serine-type endopeptidase activity
UTEX3055_RS06365	COG0740	serine-type endopeptidase activity
UTEX3055_RS06370	COG0484	heat shock protein binding
UTEX3055_RS06380	COG2203	Gaf domain
UTEX3055_RS06380	COG3706	GGDEF domain
UTEX3055_RS06380	COG5001	Diguanylate cyclase
UTEX3055_RS06380	COG4251	negative regulation of phosphorylation
UTEX3055_RS06395	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
UTEX3055_RS06400	COG0052	Belongs to the universal ribosomal protein uS2 family
UTEX3055_RS06420	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
UTEX3055_RS06425	COG0740	serine-type endopeptidase activity
UTEX3055_RS06430	COG0544	peptidyl-prolyl cis-trans isomerase activity
UTEX3055_RS06435	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
UTEX3055_RS06440	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
UTEX3055_RS06455	COG0297	glycogen (starch) synthase activity
UTEX3055_RS06475	COG1074	ATP-dependent DNA helicase activity
UTEX3055_RS06480	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
UTEX3055_RS06485	COG0434	BtpA family
UTEX3055_RS06490	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
UTEX3055_RS06500	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
UTEX3055_RS06510	COG1252	NADH dehydrogenase
UTEX3055_RS06520	COG0175	sulfate reduction
UTEX3055_RS06545	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
UTEX3055_RS06555	COG2268	Band 7 protein
UTEX3055_RS06565	COG0105	UTP biosynthetic process
UTEX3055_RS06595	COG1372	Participates in initiation and elongation during chromosome replication
UTEX3055_RS06595	COG0187	DNA topoisomerase II activity
UTEX3055_RS06600	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
UTEX3055_RS06645	COG3751	2OG-Fe(II) oxygenase superfamily
UTEX3055_RS06670	COG1090	epimerase
UTEX3055_RS06680	COG0165	Argininosuccinate lyase
UTEX3055_RS06685	COG2208	phosphoserine phosphatase activity
UTEX3055_RS06690	COG0552	protein localization to endoplasmic reticulum
UTEX3055_RS06695	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
UTEX3055_RS06710	COG0443	Heat shock 70 kDa protein
UTEX3055_RS06715	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
UTEX3055_RS06720	COG0745	RESPONSE REGULATOR receiver
UTEX3055_RS06730	COG3010	Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
UTEX3055_RS06735	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
UTEX3055_RS06740	COG1070	Carbohydrate kinase
UTEX3055_RS06745	COG2957	Belongs to the agmatine deiminase family
UTEX3055_RS06760	COG0752	glycyl-tRNA synthetase alpha subunit
UTEX3055_RS06775	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
UTEX3055_RS06780	COG0601	transmembrane transport
UTEX3055_RS06805	COG0450	alkyl hydroperoxide reductase
UTEX3055_RS06810	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
UTEX3055_RS06820	COG0024	Methionine aminopeptidase
UTEX3055_RS06825	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
UTEX3055_RS06830	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
UTEX3055_RS06835	COG0573	inorganic phosphate transmembrane transporter activity
UTEX3055_RS06840	COG0581	inorganic phosphate transmembrane transporter activity
UTEX3055_RS06845	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
UTEX3055_RS06850	COG1185	polyribonucleotide nucleotidyltransferase activity
UTEX3055_RS06870	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
UTEX3055_RS06875	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
UTEX3055_RS06885	COG0440	acetolactate synthase activity
UTEX3055_RS06890	COG1073	alpha beta
UTEX3055_RS06890	COG2226	methyltransferase
UTEX3055_RS06895	COG4636	protein conserved in cyanobacteria
UTEX3055_RS06910	COG0811	peptide transport
UTEX3055_RS06915	COG0848	biopolymer transport protein
UTEX3055_RS06930	COG0702	epimerase
UTEX3055_RS06940	COG0445	tRNA wobble uridine modification
UTEX3055_RS06950	COG0672	)-iron permease
UTEX3055_RS06955	COG1045	serine acetyltransferase
UTEX3055_RS06965	COG0583	DNA-binding transcription factor activity
UTEX3055_RS06980	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
UTEX3055_RS06985	COG2226	methyltransferase
UTEX3055_RS06990	COG0330	HflC and HflK could
UTEX3055_RS07005	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
UTEX3055_RS07020	COG2022	thiamine diphosphate biosynthetic process
UTEX3055_RS07020	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
UTEX3055_RS07025	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
UTEX3055_RS07035	COG1040	competence protein
UTEX3055_RS07045	COG2957	Belongs to the agmatine deiminase family
UTEX3055_RS07050	COG0071	Belongs to the small heat shock protein (HSP20) family
UTEX3055_RS07065	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
UTEX3055_RS07090	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
UTEX3055_RS07110	COG2140	Oxalate decarboxylase
UTEX3055_RS07120	COG0409	Hydrogenase expression formation protein
UTEX3055_RS07125	COG0167	dihydroorotate dehydrogenase activity
UTEX3055_RS07130	COG0674	pyruvate-flavodoxin oxidoreductase activity
UTEX3055_RS07130	COG1013	pyruvate-flavodoxin oxidoreductase activity
UTEX3055_RS07130	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
UTEX3055_RS07130	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
UTEX3055_RS07135	COG4956	integral membrane protein (PIN domain superfamily)
UTEX3055_RS07140	COG0635	Involved in the biosynthesis of porphyrin-containing compound
UTEX3055_RS07145	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
UTEX3055_RS07160	COG0351	phosphomethylpyrimidine kinase
UTEX3055_RS07165	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
UTEX3055_RS07180	COG1181	Belongs to the D-alanine--D-alanine ligase family
UTEX3055_RS07185	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
UTEX3055_RS07190	COG4948	Mandelate Racemase Muconate Lactonizing
UTEX3055_RS07200	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
UTEX3055_RS07235	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
UTEX3055_RS07250	COG0142	geranyltranstransferase activity
UTEX3055_RS07255	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
UTEX3055_RS07265	COG0475	glutathione-regulated potassium exporter activity
UTEX3055_RS07280	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
UTEX3055_RS07295	COG0321	lipoyl(octanoyl) transferase activity
UTEX3055_RS07300	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
UTEX3055_RS07305	COG1641	Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2 ), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor- dependent enzymes
UTEX3055_RS07310	COG0009	L-threonylcarbamoyladenylate synthase
UTEX3055_RS07320	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
UTEX3055_RS07355	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
UTEX3055_RS07360	COG1160	GTP binding
UTEX3055_RS07365	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
UTEX3055_RS07365	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
UTEX3055_RS07380	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
UTEX3055_RS07385	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
UTEX3055_RS07390	COG3429	Glucose-6-phosphate dehydrogenase subunit
UTEX3055_RS07390	COG3409	Peptidoglycan-binding domain 1 protein
UTEX3055_RS07395	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
UTEX3055_RS07400	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
UTEX3055_RS07405	COG0793	Belongs to the peptidase S41A family
UTEX3055_RS07410	COG1078	dGTPase activity
UTEX3055_RS07435	COG0189	ligase activity
UTEX3055_RS07440	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
UTEX3055_RS07445	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
UTEX3055_RS07450	COG0457	Tetratricopeptide repeat
UTEX3055_RS07465	COG3224	Antibiotic biosynthesis monooxygenase
UTEX3055_RS07470	COG2217	Heavy metal translocating P-type atpase
UTEX3055_RS07475	COG0355	proton-transporting ATP synthase activity, rotational mechanism
UTEX3055_RS07480	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
UTEX3055_RS07485	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
UTEX3055_RS07490	COG0459	protein refolding
UTEX3055_RS07495	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
UTEX3055_RS07510	COG0076	glutamate decarboxylase activity
UTEX3055_RS07515	COG0450	alkyl hydroperoxide reductase
UTEX3055_RS07520	COG0404	The glycine cleavage system catalyzes the degradation of glycine
UTEX3055_RS07535	COG0745	RESPONSE REGULATOR receiver
UTEX3055_RS07540	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
UTEX3055_RS07545	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
UTEX3055_RS07565	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
UTEX3055_RS07570	COG0632	four-way junction helicase activity
UTEX3055_RS07575	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
UTEX3055_RS07610	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
UTEX3055_RS07615	COG2877	3-deoxy-8-phosphooctulonate synthase activity
UTEX3055_RS07620	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
UTEX3055_RS07635	COG0371	Dehydrogenase
UTEX3055_RS07640	COG2267	carboxylic ester hydrolase activity
UTEX3055_RS07645	COG1811	Na channel or pump
UTEX3055_RS07650	COG5002	protein histidine kinase activity
UTEX3055_RS07665	COG0004	ammonium transporteR
UTEX3055_RS07750	COG1525	nuclease
UTEX3055_RS07775	COG1239	Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX
UTEX3055_RS07775	COG1240	Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX
UTEX3055_RS07785	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
UTEX3055_RS07790	COG0494	nUDIX hydrolase
UTEX3055_RS07805	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
UTEX3055_RS07820	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
UTEX3055_RS07840	COG0124	histidyl-tRNA synthetase
UTEX3055_RS07860	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
UTEX3055_RS07865	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
UTEX3055_RS07890	COG2170	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
UTEX3055_RS07895	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
UTEX3055_RS07910	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
UTEX3055_RS07920	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
UTEX3055_RS07925	COG0776	regulation of translation
UTEX3055_RS07935	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
UTEX3055_RS07950	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
UTEX3055_RS07960	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
UTEX3055_RS07975	COG0456	acetyltransferase
UTEX3055_RS07985	COG0477	Major facilitator Superfamily
UTEX3055_RS07995	COG4172	Belongs to the ABC transporter superfamily
UTEX3055_RS08000	COG0336	Belongs to the RNA methyltransferase TrmD family
UTEX3055_RS08010	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
UTEX3055_RS08015	COG0088	Forms part of the polypeptide exit tunnel
UTEX3055_RS08020	COG0089	rRNA binding
UTEX3055_RS08025	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
UTEX3055_RS08030	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
UTEX3055_RS08035	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
UTEX3055_RS08040	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
UTEX3055_RS08045	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
UTEX3055_RS08050	COG0255	Belongs to the universal ribosomal protein uL29 family
UTEX3055_RS08055	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
UTEX3055_RS08060	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
UTEX3055_RS08065	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
UTEX3055_RS08070	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
UTEX3055_RS08075	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
UTEX3055_RS08080	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
UTEX3055_RS08085	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
UTEX3055_RS08090	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
UTEX3055_RS08095	COG0200	Binds to the 23S rRNA
UTEX3055_RS08100	COG0201	protein transport
UTEX3055_RS08105	COG0563	adenylate kinase activity
UTEX3055_RS08110	COG0257	Belongs to the bacterial ribosomal protein bL36 family
UTEX3055_RS08115	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
UTEX3055_RS08120	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
UTEX3055_RS08125	COG0202	RNA polymerase activity
UTEX3055_RS08130	COG0203	ribosomal protein L17
UTEX3055_RS08135	COG0101	tRNA pseudouridine synthase activity
UTEX3055_RS08140	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
UTEX3055_RS08145	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
UTEX3055_RS08150	COG0254	rRNA binding
UTEX3055_RS08155	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
UTEX3055_RS08165	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
UTEX3055_RS08180	COG0587	DNA-directed DNA polymerase activity
UTEX3055_RS08190	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
UTEX3055_RS08210	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
UTEX3055_RS08225	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
UTEX3055_RS08250	COG0121	glutamine amidotransferase
UTEX3055_RS08255	COG0328	RNA-DNA hybrid ribonuclease activity
UTEX3055_RS08265	COG1994	Peptidase M50
UTEX3055_RS08265	COG0517	IMP dehydrogenase activity
UTEX3055_RS08270	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
UTEX3055_RS08275	COG1803	Methylglyoxal synthase
UTEX3055_RS08275	COG1597	lipid kinase activity
UTEX3055_RS08280	COG1950	PFAM Membrane protein of
UTEX3055_RS08295	COG1840	ABC-type Fe3 transport system, periplasmic component
UTEX3055_RS08300	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
UTEX3055_RS08315	COG0783	Belongs to the Dps family
UTEX3055_RS08320	COG0735	belongs to the Fur family
UTEX3055_RS08370	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
UTEX3055_RS08375	COG2267	carboxylic ester hydrolase activity
UTEX3055_RS08390	COG0174	glutamine synthetase
UTEX3055_RS08445	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
UTEX3055_RS08455	COG0133	tryptophan synthase activity
UTEX3055_RS08460	COG0023	Translation Initiation Factor
UTEX3055_RS08505	COG2161	toxin-antitoxin pair type II binding
UTEX3055_RS08535	COG1429	ligase activity, forming nitrogen-metal bonds
UTEX3055_RS08540	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
UTEX3055_RS08550	COG0860	N-Acetylmuramoyl-L-alanine amidase
UTEX3055_RS08560	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
UTEX3055_RS08585	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
UTEX3055_RS08605	COG0123	including yeast histone deacetylase and acetoin utilization protein
UTEX3055_RS08610	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
UTEX3055_RS08615	COG0505	Belongs to the CarA family
UTEX3055_RS08625	COG1939	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
UTEX3055_RS08630	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
UTEX3055_RS08640	COG0154	amidase activity
UTEX3055_RS08660	COG2205	protein histidine kinase activity
UTEX3055_RS08665	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
UTEX3055_RS08670	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
UTEX3055_RS08675	COG1940	carbohydrate kinase activity
UTEX3055_RS08680	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
UTEX3055_RS08685	COG1132	(ABC) transporter
UTEX3055_RS08695	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
UTEX3055_RS08700	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
UTEX3055_RS08705	COG1116	anion transmembrane transporter activity
UTEX3055_RS08710	COG1513	Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide
UTEX3055_RS08770	COG3706	GGDEF domain
UTEX3055_RS08770	COG4251	negative regulation of phosphorylation
UTEX3055_RS08770	COG5001	Diguanylate cyclase
UTEX3055_RS08770	COG2203	Gaf domain
UTEX3055_RS08780	COG2335	COG2335, Secreted and surface protein containing fasciclin-like repeats
UTEX3055_RS08790	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
UTEX3055_RS08795	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
UTEX3055_RS08800	COG0460	homoserine dehydrogenase
UTEX3055_RS08805	COG4243	Vitamin k epoxide reductase
UTEX3055_RS08815	COG0107	imidazoleglycerol-phosphate synthase activity
UTEX3055_RS08830	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
UTEX3055_RS08835	COG2095	MarC family integral membrane protein
UTEX3055_RS08840	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
UTEX3055_RS08850	COG3957	D-xylulose 5-phosphate D-fructose 6-phosphate phosphoketolase
UTEX3055_RS08855	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
UTEX3055_RS08870	COG1162	GTPase activity
UTEX3055_RS08880	COG0484	heat shock protein binding
UTEX3055_RS08885	COG0443	Heat shock 70 kDa protein
UTEX3055_RS08890	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
UTEX3055_RS08895	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
UTEX3055_RS08905	COG1459	type II secretion system
UTEX3055_RS08915	COG2081	HI0933 family
UTEX3055_RS08920	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
UTEX3055_RS08930	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
UTEX3055_RS08935	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
UTEX3055_RS08940	COG0644	oxidoreductase
UTEX3055_RS08950	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
UTEX3055_RS08955	COG1799	cell septum assembly
UTEX3055_RS08960	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
UTEX3055_RS08965	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
UTEX3055_RS08975	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
UTEX3055_RS08990	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
UTEX3055_RS09005	COG2885	chlorophyll binding
UTEX3055_RS09010	COG2885	chlorophyll binding
UTEX3055_RS09015	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
UTEX3055_RS09015	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
UTEX3055_RS09020	COG0509	glycine decarboxylation via glycine cleavage system
UTEX3055_RS09025	COG1196	nuclear chromosome segregation
UTEX3055_RS09035	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
UTEX3055_RS09045	COG0728	peptidoglycan biosynthetic process
UTEX3055_RS09050	COG1489	DNA binding
UTEX3055_RS09080	COG1819	glycosyl
UTEX3055_RS09100	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
UTEX3055_RS09105	COG0166	Belongs to the GPI family
UTEX3055_RS09110	COG0438	transferase activity, transferring glycosyl groups
UTEX3055_RS09115	COG1215	transferase activity, transferring glycosyl groups
UTEX3055_RS09135	COG0779	Required for maturation of 30S ribosomal subunits
UTEX3055_RS09140	COG0195	Participates in both transcription termination and antitermination
UTEX3055_RS09150	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
UTEX3055_RS09180	COG0515	serine threonine protein kinase
UTEX3055_RS09195	COG2385	sporulation resulting in formation of a cellular spore
UTEX3055_RS09200	COG1234	tRNA 3'-trailer cleavage
UTEX3055_RS09205	COG2010	Cytochrome c
UTEX3055_RS09210	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
UTEX3055_RS09215	COG0426	domain, Protein
UTEX3055_RS09215	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
UTEX3055_RS09220	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
UTEX3055_RS09235	COG1595	DNA-templated transcription, initiation
UTEX3055_RS09250	COG0850	regulation of cytokinetic process
UTEX3055_RS09260	COG0724	RNA recognition motif
UTEX3055_RS09270	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
UTEX3055_RS09280	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
UTEX3055_RS09280	COG0140	phosphoribosyl-ATP diphosphatase activity
UTEX3055_RS09285	COG4229	Bifunctional enzyme that catalyzes the enolization of 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P) into the intermediate 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate (HK-MTPenyl-1-P), which is then dephosphorylated to form the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK- MTPene)
UTEX3055_RS09290	COG0235	Class ii aldolase
UTEX3055_RS09295	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
UTEX3055_RS09300	COG1970	mechanosensitive ion channel activity
UTEX3055_RS09305	COG2119	membrane
UTEX3055_RS09330	COG0612	Peptidase, M16
UTEX3055_RS09335	COG3001	Fructosamine kinase
UTEX3055_RS09340	COG1562	ergosterol biosynthetic process
UTEX3055_RS09345	COG3349	Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'
UTEX3055_RS09345	COG0493	'glutamate synthase
UTEX3055_RS09360	COG0583	DNA-binding transcription factor activity
UTEX3055_RS09370	COG3118	belongs to the thioredoxin family
UTEX3055_RS09375	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
UTEX3055_RS09380	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
UTEX3055_RS09395	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
UTEX3055_RS09405	COG1473	amidohydrolase
UTEX3055_RS09420	COG1968	undecaprenyl-diphosphatase activity
UTEX3055_RS09435	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
UTEX3055_RS09440	COG1619	proteins homologs of microcin C7 resistance protein MccF
UTEX3055_RS09450	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
UTEX3055_RS09460	COG0442	prolyl-tRNA aminoacylation
UTEX3055_RS09475	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
UTEX3055_RS09480	COG0504	CTP synthase activity
UTEX3055_RS09535	COG0322	excinuclease ABC activity
UTEX3055_RS09540	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
UTEX3055_RS09550	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
UTEX3055_RS09555	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
UTEX3055_RS09555	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
UTEX3055_RS09565	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
UTEX3055_RS09570	COG0798	PFAM Bile acid sodium symporter
UTEX3055_RS09575	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
UTEX3055_RS09585	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
UTEX3055_RS09595	COG1304	FMN binding
UTEX3055_RS09615	COG1104	cysteine desulfurase activity
UTEX3055_RS09625	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
UTEX3055_RS09635	COG0739	heme binding
UTEX3055_RS09645	COG1595	DNA-templated transcription, initiation
UTEX3055_RS09660	COG0495	leucyl-tRNA aminoacylation
UTEX3055_RS09675	COG0697	spore germination
UTEX3055_RS09680	COG0616	signal peptide processing
UTEX3055_RS09705	COG0704	Plays a role in the regulation of phosphate uptake
UTEX3055_RS09710	COG0557	exoribonuclease II activity
UTEX3055_RS09715	COG0163	prenyltransferase activity
UTEX3055_RS09730	COG1633	Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME)
UTEX3055_RS09735	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
UTEX3055_RS09765	COG0717	Belongs to the dCTP deaminase family
UTEX3055_RS09775	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
UTEX3055_RS09785	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
UTEX3055_RS09805	COG1054	Belongs to the UPF0176 family
UTEX3055_RS09820	COG1543	Belongs to the glycosyl hydrolase 57 family
UTEX3055_RS09835	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
UTEX3055_RS09835	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
UTEX3055_RS09840	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
UTEX3055_RS09845	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
UTEX3055_RS09845	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
UTEX3055_RS09850	COG0515	serine threonine protein kinase
UTEX3055_RS09855	COG1555	photosystem II stabilization
UTEX3055_RS09860	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
UTEX3055_RS09870	COG0714	Associated with various cellular activities
UTEX3055_RS09890	COG0312	modulator of DNA gyrase
UTEX3055_RS09895	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
UTEX3055_RS09905	COG5002	protein histidine kinase activity
UTEX3055_RS09915	COG1566	PFAM secretion protein HlyD family protein
UTEX3055_RS09940	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
UTEX3055_RS09950	COG0009	L-threonylcarbamoyladenylate synthase
UTEX3055_RS09955	COG2890	protein-(glutamine-N5) methyltransferase activity
UTEX3055_RS09970	COG0745	RESPONSE REGULATOR receiver
UTEX3055_RS09980	COG5398	heme oxygenase
UTEX3055_RS09985	COG2084	Dehydrogenase
UTEX3055_RS09995	COG1797	cobyrinic acid a,c-diamide synthase activity
UTEX3055_RS10025	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
UTEX3055_RS10035	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
UTEX3055_RS10040	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
UTEX3055_RS10045	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
UTEX3055_RS10055	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
UTEX3055_RS10070	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
UTEX3055_RS10085	COG2710	Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein
UTEX3055_RS10110	COG1192	Involved in chromosome partitioning
UTEX3055_RS10115	COG0525	valine-tRNA ligase activity
UTEX3055_RS10120	COG0516	GMP reductase activity
UTEX3055_RS10125	COG3118	belongs to the thioredoxin family
UTEX3055_RS10130	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
UTEX3055_RS10150	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
UTEX3055_RS10155	COG0516	GMP reductase activity
UTEX3055_RS10155	COG0517	IMP dehydrogenase activity
UTEX3055_RS10170	COG0670	Belongs to the BI1 family
UTEX3055_RS10175	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
UTEX3055_RS10195	COG0745	RESPONSE REGULATOR receiver
UTEX3055_RS10200	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
UTEX3055_RS10215	COG5002	protein histidine kinase activity
UTEX3055_RS10215	COG5001	Diguanylate cyclase
UTEX3055_RS10215	COG3447	MASE1 domain protein
UTEX3055_RS10220	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
UTEX3055_RS10220	COG0426	domain, Protein
UTEX3055_RS10225	COG0426	domain, Protein
UTEX3055_RS10225	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
UTEX3055_RS10230	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
UTEX3055_RS10240	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
UTEX3055_RS10260	COG2197	response regulator
UTEX3055_RS10265	COG0596	Alpha beta hydrolase
UTEX3055_RS10295	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
UTEX3055_RS10300	COG0436	Aminotransferase
UTEX3055_RS10305	COG3118	belongs to the thioredoxin family
UTEX3055_RS10310	COG0113	porphobilinogen synthase activity
UTEX3055_RS10315	COG2133	pyrroloquinoline quinone binding
UTEX3055_RS10320	COG0338	D12 class N6 adenine-specific DNA methyltransferase
UTEX3055_RS10325	COG0484	heat shock protein binding
UTEX3055_RS10355	COG1615	UPF0182 protein
UTEX3055_RS10360	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
UTEX3055_RS10365	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
UTEX3055_RS10370	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
UTEX3055_RS10375	COG0497	DNA recombination
UTEX3055_RS10380	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
UTEX3055_RS10395	COG1702	phosphate starvation-inducible protein PhoH
UTEX3055_RS10400	COG0828	Belongs to the bacterial ribosomal protein bS21 family
UTEX3055_RS10410	COG0228	four-way junction DNA binding
UTEX3055_RS10415	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
UTEX3055_RS10435	COG1271	oxidase subunit
UTEX3055_RS10455	COG0483	inositol monophosphate 1-phosphatase activity
UTEX3055_RS10465	COG1538	Outer membrane efflux protein
UTEX3055_RS10470	COG0686	Belongs to the AlaDH PNT family
UTEX3055_RS10475	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
UTEX3055_RS10480	COG0820	rRNA (adenine-C2-)-methyltransferase activity
UTEX3055_RS10495	COG0456	acetyltransferase
UTEX3055_RS10530	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
UTEX3055_RS10540	COG0824	Thioesterase
UTEX3055_RS10545	COG0649	NAD binding
UTEX3055_RS10550	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
UTEX3055_RS10555	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
UTEX3055_RS10560	COG0812	UDP-N-acetylmuramate dehydrogenase activity
UTEX3055_RS10570	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
UTEX3055_RS10575	COG0719	Fe-S assembly protein
UTEX3055_RS10580	COG0396	ATPase activity
UTEX3055_RS10585	COG0719	Fe-S assembly protein
UTEX3055_RS10590	COG4802	Ferredoxin thioredoxin reductase catalytic beta chain
UTEX3055_RS10615	COG2205	protein histidine kinase activity
UTEX3055_RS10630	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
UTEX3055_RS10635	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
UTEX3055_RS10650	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
UTEX3055_RS10670	COG0538	isocitrate dehydrogenase activity
UTEX3055_RS10675	COG0277	FAD linked oxidase domain protein
UTEX3055_RS10680	COG0247	lactate metabolic process
UTEX3055_RS10690	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
UTEX3055_RS10695	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
UTEX3055_RS10725	COG0339	signal peptide processing
UTEX3055_RS10795	COG0383	alpha-mannosidase activity
UTEX3055_RS10805	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
UTEX3055_RS10810	COG0534	Mate efflux family protein
UTEX3055_RS10815	COG1733	regulation of RNA biosynthetic process
UTEX3055_RS10825	COG1741	Belongs to the pirin family
UTEX3055_RS10835	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
UTEX3055_RS10845	COG1715	Restriction endonuclease
UTEX3055_RS10855	COG2897	thiosulfate sulfurtransferase activity
UTEX3055_RS10860	COG4208	sulfate ABC transporter
UTEX3055_RS10870	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
UTEX3055_RS10875	COG4208	sulfate ABC transporter
UTEX3055_RS10880	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
UTEX3055_RS10885	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
UTEX3055_RS10890	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
UTEX3055_RS10895	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
UTEX3055_RS10900	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
UTEX3055_RS10915	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
UTEX3055_RS10915	COG2022	thiamine diphosphate biosynthetic process
UTEX3055_RS10945	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
UTEX3055_RS10955	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
UTEX3055_RS10965	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
UTEX3055_RS10975	COG0673	inositol 2-dehydrogenase activity
UTEX3055_RS10990	COG0215	cysteine-tRNA ligase activity
UTEX3055_RS11000	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
UTEX3055_RS11005	COG0778	Nitroreductase
UTEX3055_RS11020	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
UTEX3055_RS11035	COG0371	Dehydrogenase
UTEX3055_RS11050	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
UTEX3055_RS11055	COG1773	rubredoxin
UTEX3055_RS11075	COG0571	ribonuclease III activity
UTEX3055_RS11090	COG2203	Gaf domain
UTEX3055_RS11090	COG3706	GGDEF domain
UTEX3055_RS11090	COG4251	negative regulation of phosphorylation
UTEX3055_RS11090	COG5001	Diguanylate cyclase
UTEX3055_RS11105	COG3688	RNA-binding protein containing a PIN domain
UTEX3055_RS11110	COG1122	ATPase activity
UTEX3055_RS11125	COG2154	pterin-4-alpha-carbinolamine dehydratase
UTEX3055_RS11130	COG3659	wide pore channel activity
UTEX3055_RS11135	COG3659	wide pore channel activity
UTEX3055_RS11140	COG1959	2 iron, 2 sulfur cluster binding
UTEX3055_RS11145	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
UTEX3055_RS11150	COG0484	heat shock protein binding
UTEX3055_RS11180	COG0651	ATP synthesis coupled electron transport
UTEX3055_RS11185	COG1006	Multisubunit Na H antiporter MnhC subunit
UTEX3055_RS11195	COG0347	Belongs to the P(II) protein family
UTEX3055_RS11205	COG2010	Cytochrome c
UTEX3055_RS11215	COG0742	ribosomal rna small subunit methyltransferase
UTEX3055_RS11220	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
UTEX3055_RS11235	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
UTEX3055_RS11245	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
UTEX3055_RS11250	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
UTEX3055_RS11255	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
UTEX3055_RS11260	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
UTEX3055_RS11265	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
UTEX3055_RS11265	COG1116	anion transmembrane transporter activity
UTEX3055_RS11270	COG1116	anion transmembrane transporter activity
UTEX3055_RS11280	COG3956	TIGRFAM MazG family protein
UTEX3055_RS11295	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
UTEX3055_RS11310	COG0633	Ferredoxin
UTEX3055_RS11315	COG2264	protein methyltransferase activity
UTEX3055_RS11320	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
UTEX3055_RS11340	COG0473	3-isopropylmalate dehydrogenase activity
UTEX3055_RS11355	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
UTEX3055_RS11365	COG0482	sulfurtransferase activity
UTEX3055_RS11370	COG1191	sigma factor activity
UTEX3055_RS11380	COG3349	Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'
UTEX3055_RS11385	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
UTEX3055_RS11390	COG1187	pseudouridine synthase activity
UTEX3055_RS11405	COG5002	protein histidine kinase activity
UTEX3055_RS11415	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
UTEX3055_RS11420	COG0268	Binds directly to 16S ribosomal RNA
UTEX3055_RS11425	COG0084	hydrolase, TatD family'
UTEX3055_RS11430	COG0085	RNA polymerase activity
UTEX3055_RS11435	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
UTEX3055_RS11440	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
UTEX3055_RS11445	COG1217	gtp-binding protein TYPA
UTEX3055_RS11455	COG3604	Transcriptional regulator
UTEX3055_RS11475	COG0725	ABC transporter, periplasmic molybdate-binding protein
UTEX3055_RS11480	COG4149	molybdate abc transporter
UTEX3055_RS11520	COG3208	Thioesterase involved in non-ribosomal peptide biosynthesis
UTEX3055_RS11525	COG0716	FMN binding
UTEX3055_RS11540	COG1487	ribonuclease activity
UTEX3055_RS11545	COG4776	Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction
UTEX3055_RS11560	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
UTEX3055_RS11565	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
UTEX3055_RS11575	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
UTEX3055_RS11580	COG0613	PHP domain protein
UTEX3055_RS11585	COG0740	serine-type endopeptidase activity
UTEX3055_RS11600	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
UTEX3055_RS11615	COG0110	maltose O-acetyltransferase activity
UTEX3055_RS11630	COG1397	ADP-ribosylglycohydrolase
UTEX3055_RS11665	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
UTEX3055_RS11685	COG2217	Heavy metal translocating P-type atpase
UTEX3055_RS11715	COG0038	chloride channel
UTEX3055_RS11720	COG0018	arginyl-trna synthetase
UTEX3055_RS11725	COG0805	protein transport
UTEX3055_RS11750	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
UTEX3055_RS11760	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
UTEX3055_RS11770	COG5002	protein histidine kinase activity
UTEX3055_RS11780	COG0038	chloride channel
UTEX3055_RS11795	COG0539	negative regulation of cytoplasmic translation
UTEX3055_RS11805	COG1633	Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME)
UTEX3055_RS11810	COG5322	oxidoreductase activity
UTEX3055_RS11815	COG0825	malonyl-CoA metabolic process
UTEX3055_RS11820	COG0300	oxidoreductase activity
UTEX3055_RS11825	COG0302	gtp cyclohydrolase
UTEX3055_RS11830	COG0384	phenazine biosynthesis protein PhzF
UTEX3055_RS11835	COG2385	sporulation resulting in formation of a cellular spore
UTEX3055_RS11850	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
UTEX3055_RS11870	COG2335	COG2335, Secreted and surface protein containing fasciclin-like repeats
UTEX3055_RS11875	COG3659	wide pore channel activity
UTEX3055_RS11880	COG0836	Belongs to the mannose-6-phosphate isomerase type 2 family
UTEX3055_RS11880	COG0662	Cupin 2, conserved barrel domain protein
UTEX3055_RS11885	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
UTEX3055_RS11910	COG0230	Belongs to the bacterial ribosomal protein bL34 family
UTEX3055_RS11915	COG0594	ribonuclease P activity
UTEX3055_RS11925	COG0706	membrane insertase activity
UTEX3055_RS11940	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
UTEX3055_RS11945	COG1032	radical SAM domain protein
UTEX3055_RS11950	COG0826	peptidase U32
UTEX3055_RS11990	COG2010	Cytochrome c
UTEX3055_RS12020	COG3659	wide pore channel activity
UTEX3055_RS12025	COG3487	Iron-regulated protein
UTEX3055_RS12040	COG1214	PFAM Peptidase M22, glycoprotease
UTEX3055_RS12055	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
UTEX3055_RS12060	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
UTEX3055_RS12065	COG0416	fatty acid biosynthetic process
UTEX3055_RS12070	COG0745	RESPONSE REGULATOR receiver
UTEX3055_RS12075	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
UTEX3055_RS12085	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
UTEX3055_RS12090	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
UTEX3055_RS12095	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
UTEX3055_RS12100	COG0288	reversible hydration of carbon dioxide
UTEX3055_RS12115	COG0191	fructose-bisphosphate aldolase activity
UTEX3055_RS12130	COG1270	Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
UTEX3055_RS12135	COG0083	homoserine kinase activity
UTEX3055_RS12140	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
UTEX3055_RS12160	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
UTEX3055_RS12170	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
UTEX3055_RS12175	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
UTEX3055_RS12175	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
UTEX3055_RS12180	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
UTEX3055_RS12200	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
UTEX3055_RS12205	COG4451	ribulose bisphosphate carboxylase, small
UTEX3055_RS12210	COG1850	ribulose-bisphosphate carboxylase activity
UTEX3055_RS12215	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
UTEX3055_RS12220	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
UTEX3055_RS12225	COG4451	ribulose bisphosphate carboxylase, small
UTEX3055_RS12225	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
UTEX3055_RS12230	COG4576	ethanolamine utilization protein EutN carboxysome structural protein Ccml
UTEX3055_RS12235	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
UTEX3055_RS12240	COG2710	Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein
UTEX3055_RS12245	COG1348	The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex which has 2 components the iron protein and the molybdenum-iron protein
UTEX3055_RS12260	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
UTEX3055_RS12265	COG1007	ATP synthesis coupled electron transport
UTEX3055_RS12270	COG1136	(ABC) transporter
UTEX3055_RS12275	COG0730	response to heat
UTEX3055_RS12285	COG0095	Lipoate-protein ligase
UTEX3055_RS12290	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
UTEX3055_RS12295	COG1840	ABC-type Fe3 transport system, periplasmic component
UTEX3055_RS12300	COG4106	trans-aconitate 2-methyltransferase activity
UTEX3055_RS12305	COG1178	ABC-type Fe3 transport system permease component
UTEX3055_RS12310	COG3842	ATPase activity
UTEX3055_RS12320	COG0745	RESPONSE REGULATOR receiver
UTEX3055_RS12325	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
UTEX3055_RS12340	COG2382	esterase
UTEX3055_RS12340	COG3507	Belongs to the glycosyl hydrolase 43 family
UTEX3055_RS12340	COG3693	PFAM glycoside hydrolase, family 10
UTEX3055_RS12375	COG0123	including yeast histone deacetylase and acetoin utilization protein
UTEX3055_RS12380	COG0737	Belongs to the 5'-nucleotidase family
UTEX3055_RS12385	COG0606	chelatase, subunit chli
UTEX3055_RS12390	COG0537	adenosine 5'-monophosphoramidase activity
UTEX3055_RS12400	COG3338	carbonate dehydratase activity
UTEX3055_RS12405	COG1606	tRNA processing
UTEX3055_RS12410	COG2109	Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids
UTEX3055_RS12425	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
UTEX3055_RS12435	COG0488	(ABC) transporter
UTEX3055_RS12445	COG0439	Biotin carboxylase
UTEX3055_RS12455	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
UTEX3055_RS12460	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
UTEX3055_RS12475	COG0564	pseudouridine synthase activity
UTEX3055_RS12485	COG1410	methionine synthase
UTEX3055_RS12485	COG0646	methionine synthase
UTEX3055_RS12490	COG0598	Magnesium transport protein CorA
UTEX3055_RS12500	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
UTEX3055_RS12510	COG2124	cytochrome p450
UTEX3055_RS12515	COG1575	Belongs to the MenA family. Type 1 subfamily
UTEX3055_RS12520	COG2095	MarC family integral membrane protein
UTEX3055_RS12545	COG1357	PFAM Pentapeptide repeats (8 copies)
UTEX3055_RS12550	COG1316	TRANSCRIPTIONal
UTEX3055_RS12555	COG1035	Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus
UTEX3055_RS12565	COG4279	zinc finger
UTEX3055_RS12570	COG4251	negative regulation of phosphorylation
UTEX3055_RS12575	COG0784	Response regulator, receiver
UTEX3055_RS12585	COG2814	Major facilitator Superfamily
UTEX3055_RS12595	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
UTEX3055_RS12600	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
UTEX3055_RS12620	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
UTEX3055_RS12625	COG0713	ATP synthesis coupled electron transport
UTEX3055_RS12630	COG0839	Belongs to the complex I subunit 6 family
UTEX3055_RS12635	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
UTEX3055_RS12640	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
UTEX3055_RS12650	COG0628	permease
UTEX3055_RS12655	COG0242	peptide deformylase activity
UTEX3055_RS12680	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
UTEX3055_RS12685	COG0602	queuosine metabolic process
UTEX3055_RS12695	COG2226	methyltransferase
UTEX3055_RS12715	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
UTEX3055_RS12720	COG0305	Participates in initiation and elongation during chromosome replication
UTEX3055_RS12720	COG1372	Participates in initiation and elongation during chromosome replication
UTEX3055_RS12720	COG1372	Participates in initiation and elongation during chromosome replication
UTEX3055_RS12720	COG0305	Participates in initiation and elongation during chromosome replication
UTEX3055_RS12725	COG4581	dead DEAH box helicase
UTEX3055_RS12730	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
UTEX3055_RS12750	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
UTEX3055_RS12755	COG1108	ABC-type Mn2 Zn2 transport systems permease components
UTEX3055_RS12760	COG1121	(ABC) transporter
UTEX3055_RS12765	COG0803	Belongs to the bacterial solute-binding protein 9 family
UTEX3055_RS12770	COG1206	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
UTEX3055_RS12775	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
UTEX3055_RS12780	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
UTEX3055_RS12785	COG1132	(ABC) transporter
UTEX3055_RS12795	COG0583	DNA-binding transcription factor activity
UTEX3055_RS12800	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
UTEX3055_RS12800	COG0646	methionine synthase
UTEX3055_RS12805	COG0180	Tryptophanyl-tRNA synthetase
UTEX3055_RS12830	COG0589	response to stress
UTEX3055_RS12835	COG0514	ATP-dependent DNA helicase (RecQ)
UTEX3055_RS12840	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
UTEX3055_RS12845	COG2006	4fe-4S ferredoxin, iron-sulfur binding domain protein
UTEX3055_RS12850	COG3706	GGDEF domain
UTEX3055_RS12870	COG0515	serine threonine protein kinase
UTEX3055_RS12870	COG1357	PFAM Pentapeptide repeats (8 copies)
UTEX3055_RS12875	COG0072	phenylalanine-tRNA ligase activity
UTEX3055_RS12880	COG0358	DNA primase activity
UTEX3055_RS12885	COG0640	Transcriptional regulator
UTEX3055_RS12895	COG0312	modulator of DNA gyrase
UTEX3055_RS12915	COG0303	'Molybdopterin
UTEX3055_RS12920	COG0315	cyclic pyranopterin monophosphate synthase activity
UTEX3055_RS12920	COG0521	Mo-molybdopterin cofactor biosynthetic process
UTEX3055_RS12930	COG0314	molybdopterin synthase activity
UTEX3055_RS12935	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
UTEX3055_RS12950	COG0291	Belongs to the bacterial ribosomal protein bL35 family
UTEX3055_RS12955	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
UTEX3055_RS12960	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
UTEX3055_RS12975	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
UTEX3055_RS12975	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
UTEX3055_RS12990	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
UTEX3055_RS12995	COG2239	Acts as a magnesium transporter
UTEX3055_RS13000	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
UTEX3055_RS13010	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
UTEX3055_RS13020	COG0025	NhaP-type Na H and K H
UTEX3055_RS13025	COG0116	Belongs to the methyltransferase superfamily
UTEX3055_RS13030	COG2509	5-formyltetrahydrofolate cyclo-ligase activity
UTEX3055_RS13035	COG0149	triose-phosphate isomerase activity
UTEX3055_RS13040	COG0501	Belongs to the peptidase M48B family
UTEX3055_RS13045	COG0003	Pfam Anion-transporting ATPase
UTEX3055_RS13055	COG0038	chloride channel
UTEX3055_RS13060	COG0625	glutathione transferase activity
UTEX3055_RS13065	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
UTEX3055_RS13080	COG0420	3'-5' exonuclease activity
UTEX3055_RS13085	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
UTEX3055_RS13130	COG0583	DNA-binding transcription factor activity
UTEX3055_RS13140	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
UTEX3055_RS13145	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
UTEX3055_RS13150	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
UTEX3055_RS13155	COG1116	anion transmembrane transporter activity
UTEX3055_RS13155	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
UTEX3055_RS13160	COG1116	anion transmembrane transporter activity
UTEX3055_RS13165	COG0243	molybdopterin cofactor binding
UTEX3055_RS13185	COG0723	plastoquinol--plastocyanin reductase activity
UTEX3055_RS13190	COG0739	heme binding
UTEX3055_RS13195	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
UTEX3055_RS13200	COG2875	Belongs to the precorrin methyltransferase family
UTEX3055_RS13210	COG2003	Belongs to the UPF0758 family
UTEX3055_RS13220	COG0612	Peptidase, M16
UTEX3055_RS13230	COG1566	PFAM secretion protein HlyD family protein
UTEX3055_RS13240	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
UTEX3055_RS13250	COG0211	Belongs to the bacterial ribosomal protein bL27 family
UTEX3055_RS13255	COG0261	This protein binds to 23S rRNA in the presence of protein L20
UTEX3055_RS13265	COG4251	negative regulation of phosphorylation
UTEX3055_RS13270	COG0467	Core component of the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. Binds to DNA. The KaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction
UTEX3055_RS13280	COG0386	Belongs to the glutathione peroxidase family
UTEX3055_RS13320	COG4115	mRNA cleavage
UTEX3055_RS13330	COG4974	Belongs to the 'phage' integrase family
UTEX3055_RS13350	COG1216	Glycosyl transferase, family 2
UTEX3055_RS13360	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
UTEX3055_RS13365	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
UTEX3055_RS13370	COG0134	indole-3-glycerol-phosphate synthase activity
UTEX3055_RS13385	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
UTEX3055_RS13400	COG0194	GDP metabolic process
UTEX3055_RS13405	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
UTEX3055_RS13410	COG0746	molybdenum cofactor guanylyltransferase activity
UTEX3055_RS13445	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
UTEX3055_RS13450	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
UTEX3055_RS13455	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
UTEX3055_RS13460	COG1773	rubredoxin
UTEX3055_RS13465	COG4447	cellulose binding
UTEX3055_RS13495	COG0815	Transfers the fatty acyl group on membrane lipoproteins
UTEX3055_RS13500	COG3046	protein related to deoxyribodipyrimidine photolyase
UTEX3055_RS13505	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
UTEX3055_RS13515	COG1691	(AIR) carboxylase
UTEX3055_RS13570	COG5001	Diguanylate cyclase
UTEX3055_RS13575	COG1074	ATP-dependent DNA helicase activity
UTEX3055_RS13590	COG1116	anion transmembrane transporter activity
UTEX3055_RS13595	COG1160	GTP binding
UTEX3055_RS13600	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
UTEX3055_RS13605	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
UTEX3055_RS13605	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
UTEX3055_RS13620	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
UTEX3055_RS13635	COG0271	Belongs to the BolA IbaG family
UTEX3055_RS13640	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
UTEX3055_RS13660	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
UTEX3055_RS13680	COG0037	tRNA processing
UTEX3055_RS13725	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
UTEX3055_RS13750	COG0312	modulator of DNA gyrase
UTEX3055_RS13760	COG0643	Histidine kinase
UTEX3055_RS13760	COG2198	Histidine kinase
UTEX3055_RS13765	COG0557	exoribonuclease II activity
UTEX3055_RS13770	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
UTEX3055_RS13775	COG0267	Belongs to the bacterial ribosomal protein bL33 family
UTEX3055_RS13780	COG0515	serine threonine protein kinase
UTEX3055_RS13780	COG3266	domain, Protein
UTEX3055_RS13785	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
UTEX3055_RS13790	COG0398	Pfam SNARE associated Golgi protein
UTEX3055_RS13795	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
UTEX3055_RS13815	COG0126	phosphoglycerate kinase activity
UTEX3055_RS13820	COG0589	response to stress
UTEX3055_RS13830	COG0628	permease
UTEX3055_RS13835	COG0564	pseudouridine synthase activity
UTEX3055_RS13840	COG4991	sh3 domain protein
UTEX3055_RS13840	COG3064	Membrane
UTEX3055_RS13840	COG0515	serine threonine protein kinase
UTEX3055_RS13850	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
UTEX3055_RS13855	COG0776	regulation of translation
UTEX3055_RS13870	COG0489	protein tyrosine kinase activity
UTEX3055_RS13875	COG0772	Belongs to the SEDS family
UTEX3055_RS13880	COG0363	glucosamine-6-phosphate deaminase activity
UTEX3055_RS13890	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
UTEX3055_RS13910	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
UTEX3055_RS13915	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
UTEX3055_RS13920	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
UTEX3055_RS13925	COG1045	serine acetyltransferase
UTEX3055_RS13930	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
UTEX3055_RS13955	COG0753	catalase activity
UTEX3055_RS13960	COG1285	pathogenesis
UTEX3055_RS13965	COG2059	Chromate
UTEX3055_RS13995	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
UTEX3055_RS13995	COG1116	anion transmembrane transporter activity
UTEX3055_RS14000	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
UTEX3055_RS14040	COG1230	cation diffusion facilitator family transporter
UTEX3055_RS14050	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
UTEX3055_RS14055	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
UTEX3055_RS14060	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
UTEX3055_RS14065	COG1116	anion transmembrane transporter activity
UTEX3055_RS14070	COG3119	arylsulfatase activity
UTEX3055_RS14075	COG2890	protein-(glutamine-N5) methyltransferase activity
UTEX3055_RS14080	COG0641	radical SAM
UTEX3055_RS14085	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
UTEX3055_RS14090	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
UTEX3055_RS14095	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
UTEX3055_RS14105	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
UTEX3055_RS14165	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
UTEX3055_RS14265	COG1108	ABC-type Mn2 Zn2 transport systems permease components
UTEX3055_RS14270	COG1121	(ABC) transporter
UTEX3055_RS14275	COG0803	Belongs to the bacterial solute-binding protein 9 family
UTEX3055_RS14280	COG2217	Heavy metal translocating P-type atpase
UTEX3055_RS14325	COG2205	protein histidine kinase activity
UTEX3055_RS14330	COG0745	RESPONSE REGULATOR receiver
UTEX3055_RS14355	COG0582	viral genome integration into host DNA
UTEX3055_RS14360	COG1895	HEPN domain
UTEX3055_RS14375	COG1468	defense response to virus
UTEX3055_RS14375	COG1518	maintenance of DNA repeat elements
UTEX3055_RS14380	COG1343	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
UTEX3055_RS14420	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
UTEX3055_RS14425	COG2442	InterPro IPR007367
UTEX3055_RS14475	COG1203	CRISPR-associated helicase, Cas3
UTEX3055_RS14485	COG1857	crispr-associated protein