locus-tag class description SynA1562_RS00005 PF02768 DNA polymerase III beta subunit, C-terminal domain SynA1562_RS00005 PF02767 DNA polymerase III beta subunit, central domain SynA1562_RS00005 PF00712 DNA polymerase III beta subunit, N-terminal domain SynA1562_RS00015 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain SynA1562_RS00015 PF00586 AIR synthase related protein, N-terminal domain SynA1562_RS00015 PF02769 AIR synthase related protein, C-terminal domain SynA1562_RS00020 PF00156 Phosphoribosyl transferase domain SynA1562_RS00025 PF03989 DNA gyrase C-terminal domain, beta-propeller SynA1562_RS00025 PF00521 DNA gyrase/topoisomerase IV, subunit A SynA1562_RS00035 PF08331 Domain of unknown function (DUF1730) SynA1562_RS00050 PF01029 NusB family SynA1562_RS00055 PF00448 SRP54-type protein, GTPase domain SynA1562_RS00055 PF02881 SRP54-type protein, helical bundle domain SynA1562_RS00060 PF07228 Stage II sporulation protein E (SpoIIE) SynA1562_RS00060 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain SynA1562_RS00065 PF00206 Lyase SynA1562_RS00065 PF14698 Argininosuccinate lyase C-terminal SynA1562_RS00070 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) SynA1562_RS00075 PF01207 Dihydrouridine synthase (Dus) SynA1562_RS00080 PF01641 SelR domain SynA1562_RS00090 PF00482 Type II secretion system (T2SS), protein F SynA1562_RS00105 PF01025 GrpE SynA1562_RS00110 PF00684 DnaJ central domain SynA1562_RS00110 PF01556 DnaJ C terminal domain SynA1562_RS00110 PF00226 DnaJ domain SynA1562_RS00120 PF03193 RsgA GTPase SynA1562_RS00125 PF02575 YbaB/EbfC DNA-binding family SynA1562_RS00130 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain SynA1562_RS00130 PF01565 FAD binding domain SynA1562_RS00135 PF08245 Mur ligase middle domain SynA1562_RS00135 PF01225 Mur ligase family, catalytic domain SynA1562_RS00135 PF02875 Mur ligase family, glutamate ligase domain SynA1562_RS00145 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain SynA1562_RS00145 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SynA1562_RS00150 PF02769 AIR synthase related protein, C-terminal domain SynA1562_RS00150 PF00586 AIR synthase related protein, N-terminal domain SynA1562_RS00155 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SynA1562_RS00160 PF09285 Elongation factor P, C-terminal SynA1562_RS00160 PF08207 Elongation factor P (EF-P) KOW-like domain SynA1562_RS00160 PF01132 Elongation factor P (EF-P) OB domain SynA1562_RS00165 PF00364 Biotin-requiring enzyme SynA1562_RS00170 PF04166 Pyridoxal phosphate biosynthetic protein PdxA SynA1562_RS00195 PF04434 SWIM zinc finger SynA1562_RS00195 PF00176 SNF2 family N-terminal domain SynA1562_RS00195 PF00271 Helicase conserved C-terminal domain SynA1562_RS00230 PF00266 Aminotransferase class-V SynA1562_RS00235 PF01888 CbiD SynA1562_RS00240 PF00117 Glutamine amidotransferase class-I SynA1562_RS00240 PF00958 GMP synthase C terminal domain SynA1562_RS00260 PF00905 Penicillin binding protein transpeptidase domain SynA1562_RS00260 PF03717 Penicillin-binding Protein dimerisation domain SynA1562_RS00265 PF13439 Glycosyltransferase Family 4 SynA1562_RS00265 PF00534 Glycosyl transferases group 1 SynA1562_RS00270 PF16363 GDP-mannose 4,6 dehydratase SynA1562_RS00280 PF05690 Thiazole biosynthesis protein ThiG SynA1562_RS00295 PF00453 Ribosomal protein L20 SynA1562_RS00300 PF01632 Ribosomal protein L35 SynA1562_RS00305 PF08486 Stage II sporulation protein SynA1562_RS00315 PF12169 DNA polymerase III subunits gamma and tau domain III SynA1562_RS00325 PF10431 C-terminal, D2-small domain, of ClpB protein SynA1562_RS00325 PF07724 AAA domain (Cdc48 subfamily) SynA1562_RS00325 PF06689 ClpX C4-type zinc finger SynA1562_RS00330 PF00574 Clp protease SynA1562_RS00335 PF05698 Bacterial trigger factor protein (TF) C-terminus SynA1562_RS00335 PF05697 Bacterial trigger factor protein (TF) SynA1562_RS00335 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SynA1562_RS00340 PF01118 Semialdehyde dehydrogenase, NAD binding domain SynA1562_RS00340 PF02774 Semialdehyde dehydrogenase, dimerisation domain SynA1562_RS00345 PF00701 Dihydrodipicolinate synthetase family SynA1562_RS00360 PF13840 ACT domain SynA1562_RS00360 PF00696 Amino acid kinase family SynA1562_RS00370 PF02570 Precorrin-8X methylmutase SynA1562_RS00375 PF01171 PP-loop family SynA1562_RS00375 PF09179 TilS substrate binding domain SynA1562_RS00385 PF01737 YCF9 SynA1562_RS00390 PF00885 6,7-dimethyl-8-ribityllumazine synthase SynA1562_RS00395 PF05188 MutS domain II SynA1562_RS00395 PF00488 MutS domain V SynA1562_RS00395 PF05192 MutS domain III SynA1562_RS00395 PF05190 MutS family domain IV SynA1562_RS00395 PF01624 MutS domain I SynA1562_RS00405 PF00271 Helicase conserved C-terminal domain SynA1562_RS00405 PF17757 UvrB interaction domain SynA1562_RS00405 PF12344 Ultra-violet resistance protein B SynA1562_RS00405 PF02151 UvrB/uvrC motif SynA1562_RS00405 PF04851 Type III restriction enzyme, res subunit SynA1562_RS00415 PF07517 SecA DEAD-like domain SynA1562_RS00415 PF07516 SecA Wing and Scaffold domain SynA1562_RS00415 PF01043 SecA preprotein cross-linking domain SynA1562_RS00420 PF00132 Bacterial transferase hexapeptide (six repeats) SynA1562_RS00420 PF06426 Serine acetyltransferase, N-terminal SynA1562_RS00425 PF00392 Bacterial regulatory proteins, gntR family SynA1562_RS00435 PF05198 Translation initiation factor IF-3, N-terminal domain SynA1562_RS00435 PF00707 Translation initiation factor IF-3, C-terminal domain SynA1562_RS00445 PF00986 DNA gyrase B subunit, carboxyl terminus SynA1562_RS00445 PF00204 DNA gyrase B SynA1562_RS00445 PF01751 Toprim domain SynA1562_RS00445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SynA1562_RS00455 PF02537 CrcB-like protein, Camphor Resistance (CrcB) SynA1562_RS00460 PF02537 CrcB-like protein, Camphor Resistance (CrcB) SynA1562_RS00465 PF00255 Glutathione peroxidase SynA1562_RS00470 PF00571 CBS domain SynA1562_RS00470 PF03448 MgtE intracellular N domain SynA1562_RS00470 PF01769 Divalent cation transporter SynA1562_RS00475 PF00140 Sigma-70 factor, region 1.2 SynA1562_RS00475 PF04542 Sigma-70 region 2 SynA1562_RS00475 PF04545 Sigma-70, region 4 SynA1562_RS00475 PF04539 Sigma-70 region 3 SynA1562_RS00480 PF00561 alpha/beta hydrolase fold SynA1562_RS00485 PF10576 Iron-sulfur binding domain of endonuclease III SynA1562_RS00485 PF00633 Helix-hairpin-helix motif SynA1562_RS00485 PF00730 HhH-GPD superfamily base excision DNA repair protein SynA1562_RS00485 PF14815 NUDIX domain SynA1562_RS00490 PF00294 pfkB family carbohydrate kinase SynA1562_RS00495 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE SynA1562_RS00500 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain SynA1562_RS00500 PF05221 S-adenosyl-L-homocysteine hydrolase SynA1562_RS00505 PF09335 SNARE associated Golgi protein SynA1562_RS00510 PF00436 Single-strand binding protein family SynA1562_RS00520 PF04085 rod shape-determining protein MreC SynA1562_RS00535 PF00072 Response regulator receiver domain SynA1562_RS00535 PF00486 Transcriptional regulatory protein, C terminal SynA1562_RS00540 PF01336 OB-fold nucleic acid binding domain SynA1562_RS00540 PF00152 tRNA synthetases class II (D, K and N) SynA1562_RS00560 PF10017 Histidine-specific methyltransferase, SAM-dependent SynA1562_RS00575 PF01668 SmpB protein SynA1562_RS00580 PF05491 RuvB C-terminal winged helix domain SynA1562_RS00580 PF17864 RuvB AAA lid domain SynA1562_RS00580 PF05496 Holliday junction DNA helicase RuvB P-loop domain SynA1562_RS00590 PF07687 Peptidase dimerisation domain SynA1562_RS00590 PF01546 Peptidase family M20/M25/M40 SynA1562_RS00605 PF01964 Radical SAM ThiC family SynA1562_RS00610 PF00456 Transketolase, thiamine diphosphate binding domain SynA1562_RS00610 PF02779 Transketolase, pyrimidine binding domain SynA1562_RS00610 PF02780 Transketolase, C-terminal domain SynA1562_RS00615 PF00109 Beta-ketoacyl synthase, N-terminal domain SynA1562_RS00615 PF02801 Beta-ketoacyl synthase, C-terminal domain SynA1562_RS00620 PF00550 Phosphopantetheine attachment site SynA1562_RS00625 PF12838 4Fe-4S dicluster domain SynA1562_RS00630 PF01380 SIS domain SynA1562_RS00655 PF00535 Glycosyl transferase family 2 SynA1562_RS00675 PF16363 GDP-mannose 4,6 dehydratase SynA1562_RS00680 PF01370 NAD dependent epimerase/dehydratase family SynA1562_RS00685 PF16363 GDP-mannose 4,6 dehydratase SynA1562_RS00690 PF00483 Nucleotidyl transferase SynA1562_RS00690 PF01050 Mannose-6-phosphate isomerase SynA1562_RS00715 PF00535 Glycosyl transferase family 2 SynA1562_RS00725 PF16363 GDP-mannose 4,6 dehydratase SynA1562_RS00730 PF16363 GDP-mannose 4,6 dehydratase SynA1562_RS00735 PF00483 Nucleotidyl transferase SynA1562_RS00735 PF01050 Mannose-6-phosphate isomerase SynA1562_RS00740 PF05239 PRC-barrel domain SynA1562_RS00740 PF01782 RimM N-terminal domain SynA1562_RS00750 PF00520 Ion transport protein SynA1562_RS00750 PF00027 Cyclic nucleotide-binding domain SynA1562_RS00755 PF00035 Double-stranded RNA binding motif SynA1562_RS00755 PF14622 Ribonuclease-III-like SynA1562_RS00780 PF00343 Carbohydrate phosphorylase SynA1562_RS00785 PF00999 Sodium/hydrogen exchanger family SynA1562_RS00795 PF12697 Alpha/beta hydrolase family SynA1562_RS00805 PF01565 FAD binding domain SynA1562_RS00815 PF02754 Cysteine-rich domain SynA1562_RS00815 PF13183 4Fe-4S dicluster domain SynA1562_RS00820 PF00180 Isocitrate/isopropylmalate dehydrogenase SynA1562_RS00825 PF00535 Glycosyl transferase family 2 SynA1562_RS00835 PF01048 Phosphorylase superfamily SynA1562_RS00845 PF01126 Heme oxygenase SynA1562_RS00855 PF00005 ABC transporter SynA1562_RS00855 PF00664 ABC transporter transmembrane region SynA1562_RS00875 PF00534 Glycosyl transferases group 1 SynA1562_RS00880 PF13439 Glycosyltransferase Family 4 SynA1562_RS00880 PF00534 Glycosyl transferases group 1 SynA1562_RS00885 PF00534 Glycosyl transferases group 1 SynA1562_RS00885 PF13439 Glycosyltransferase Family 4 SynA1562_RS00900 PF00793 DAHP synthetase I family SynA1562_RS00920 PF00580 UvrD/REP helicase N-terminal domain SynA1562_RS00920 PF13361 UvrD-like helicase C-terminal domain SynA1562_RS00930 PF02348 Cytidylyltransferase SynA1562_RS00940 PF01380 SIS domain SynA1562_RS00940 PF00571 CBS domain SynA1562_RS00945 PF01743 Poly A polymerase head domain SynA1562_RS00955 PF00586 AIR synthase related protein, N-terminal domain SynA1562_RS00955 PF02769 AIR synthase related protein, C-terminal domain SynA1562_RS00960 PF16363 GDP-mannose 4,6 dehydratase SynA1562_RS00965 PF13393 Histidyl-tRNA synthetase SynA1562_RS00965 PF03129 Anticodon binding domain SynA1562_RS00975 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain SynA1562_RS00975 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain SynA1562_RS00975 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain SynA1562_RS00980 PF01370 NAD dependent epimerase/dehydratase family SynA1562_RS00995 PF00535 Glycosyl transferase family 2 SynA1562_RS00995 PF00534 Glycosyl transferases group 1 SynA1562_RS01005 PF01788 PsbJ SynA1562_RS01010 PF02419 PsbL protein SynA1562_RS01015 PF00283 Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits SynA1562_RS01020 PF00284 Lumenal portion of Cytochrome b559, alpha (gene psbE) subunit SynA1562_RS01020 PF00283 Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits SynA1562_RS01025 PF14870 Photosynthesis system II assembly factor YCF48 SynA1562_RS01030 PF00301 Rubredoxin SynA1562_RS01035 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 SynA1562_RS01040 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit SynA1562_RS01045 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit SynA1562_RS01050 PF01933 Uncharacterised protein family UPF0052 SynA1562_RS01055 PF00005 ABC transporter SynA1562_RS01055 PF08402 TOBE domain SynA1562_RS01065 PF17863 AAA lid domain SynA1562_RS01065 PF01078 Magnesium chelatase, subunit ChlI SynA1562_RS01065 PF13519 von Willebrand factor type A domain SynA1562_RS01075 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) SynA1562_RS01080 PF00293 NUDIX domain SynA1562_RS01085 PF00875 DNA photolyase SynA1562_RS01085 PF03441 FAD binding domain of DNA photolyase SynA1562_RS01095 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family SynA1562_RS01125 PF00475 Imidazoleglycerol-phosphate dehydratase SynA1562_RS01130 PF03055 Retinal pigment epithelial membrane protein SynA1562_RS01140 PF02028 BCCT, betaine/carnitine/choline family transporter SynA1562_RS01145 PF00890 FAD binding domain SynA1562_RS01160 PF01725 Ham1 family SynA1562_RS01165 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SynA1562_RS01165 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SynA1562_RS01165 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SynA1562_RS01165 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SynA1562_RS01175 PF01571 Aminomethyltransferase folate-binding domain SynA1562_RS01195 PF03471 Transporter associated domain SynA1562_RS01195 PF00571 CBS domain SynA1562_RS01195 PF01595 Cyclin M transmembrane N-terminal domain SynA1562_RS01200 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SynA1562_RS01200 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SynA1562_RS01210 PF03808 Glycosyl transferase WecB/TagA/CpsF family SynA1562_RS01215 PF02533 Photosystem II 4 kDa reaction centre component SynA1562_RS01220 PF01702 Queuine tRNA-ribosyltransferase SynA1562_RS01225 PF02654 Cobalamin-5-phosphate synthase SynA1562_RS01230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SynA1562_RS01230 PF00512 His Kinase A (phospho-acceptor) domain SynA1562_RS01245 PF02142 MGS-like domain SynA1562_RS01245 PF01808 AICARFT/IMPCHase bienzyme SynA1562_RS01260 PF02401 LytB protein SynA1562_RS01265 PF00909 Ammonium Transporter Family SynA1562_RS01270 PF17746 SfsA N-terminal OB domain SynA1562_RS01270 PF03749 Sugar fermentation stimulation protein RE domain SynA1562_RS01275 PF03023 Lipid II flippase MurJ SynA1562_RS01300 PF00464 Serine hydroxymethyltransferase SynA1562_RS01305 PF00953 Glycosyl transferase family 4 SynA1562_RS01310 PF02464 Competence-damaged protein SynA1562_RS01310 PF18146 Damage-inducible protein CinA KH domain SynA1562_RS01310 PF00994 Probable molybdopterin binding domain SynA1562_RS01315 PF00330 Aconitase family (aconitate hydratase) SynA1562_RS01320 PF00694 Aconitase C-terminal domain SynA1562_RS01335 PF02532 Photosystem II reaction centre I protein (PSII 4.8 kDa protein) SynA1562_RS01345 PF02468 Photosystem II reaction centre N protein (psbN) SynA1562_RS01350 PF00737 Photosystem II 10 kDa phosphoprotein SynA1562_RS01355 PF02416 mttA/Hcf106 family SynA1562_RS01360 PF01195 Peptidyl-tRNA hydrolase SynA1562_RS01375 PF11283 Protein of unknown function (DUF3084) SynA1562_RS01380 PF00027 Cyclic nucleotide-binding domain SynA1562_RS01380 PF13545 Crp-like helix-turn-helix domain SynA1562_RS01385 PF03725 3' exoribonuclease family, domain 2 SynA1562_RS01385 PF01138 3' exoribonuclease family, domain 1 SynA1562_RS01395 PF00692 dUTPase SynA1562_RS01405 PF00085 Thioredoxin SynA1562_RS01415 PF01464 Transglycosylase SLT domain SynA1562_RS01420 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SynA1562_RS01420 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SynA1562_RS01420 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SynA1562_RS01420 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SynA1562_RS01435 PF02390 Putative methyltransferase SynA1562_RS01455 PF06827 Zinc finger found in FPG and IleRS SynA1562_RS01455 PF00133 tRNA synthetases class I (I, L, M and V) SynA1562_RS01455 PF08264 Anticodon-binding domain of tRNA SynA1562_RS01475 PF02686 Glu-tRNAGln amidotransferase C subunit SynA1562_RS01480 PF02633 Creatinine amidohydrolase SynA1562_RS01490 PF02592 Putative vitamin uptake transporter SynA1562_RS01510 PF02245 Methylpurine-DNA glycosylase (MPG) SynA1562_RS01515 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SynA1562_RS01515 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SynA1562_RS01520 PF07992 Pyridine nucleotide-disulphide oxidoreductase SynA1562_RS01545 PF10742 Protein of unknown function (DUF2555) SynA1562_RS01550 PF02441 Flavoprotein SynA1562_RS01550 PF04127 DNA / pantothenate metabolism flavoprotein SynA1562_RS01560 PF01716 Manganese-stabilising protein / photosystem II polypeptide SynA1562_RS01565 PF14306 PUA-like domain SynA1562_RS01565 PF01747 ATP-sulfurylase SynA1562_RS01570 PF00004 ATPase family associated with various cellular activities (AAA) SynA1562_RS01570 PF01434 Peptidase family M41 SynA1562_RS01570 PF06480 FtsH Extracellular SynA1562_RS01570 PF17862 AAA+ lid domain SynA1562_RS01585 PF01264 Chorismate synthase SynA1562_RS01600 PF00124 Photosynthetic reaction centre protein SynA1562_RS01605 PF01938 TRAM domain SynA1562_RS01605 PF04055 Radical SAM superfamily SynA1562_RS01605 PF00919 Uncharacterized protein family UPF0004 SynA1562_RS01615 PF02617 ATP-dependent Clp protease adaptor protein ClpS SynA1562_RS01620 PF00155 Aminotransferase class I and II SynA1562_RS01630 PF10150 Ribonuclease E/G family SynA1562_RS01635 PF01351 Ribonuclease HII SynA1562_RS01645 PF01842 ACT domain SynA1562_RS01645 PF00800 Prephenate dehydratase SynA1562_RS01650 PF08241 Methyltransferase domain SynA1562_RS01655 PF00004 ATPase family associated with various cellular activities (AAA) SynA1562_RS01655 PF05362 Lon protease (S16) C-terminal proteolytic domain SynA1562_RS01655 PF02190 ATP-dependent protease La (LON) substrate-binding domain SynA1562_RS01660 PF00338 Ribosomal protein S10p/S20e SynA1562_RS01665 PF00009 Elongation factor Tu GTP binding domain SynA1562_RS01665 PF03144 Elongation factor Tu domain 2 SynA1562_RS01665 PF03143 Elongation factor Tu C-terminal domain SynA1562_RS01670 PF03764 Elongation factor G, domain IV SynA1562_RS01670 PF00679 Elongation factor G C-terminus SynA1562_RS01670 PF00009 Elongation factor Tu GTP binding domain SynA1562_RS01670 PF14492 Elongation Factor G, domain II SynA1562_RS01670 PF03144 Elongation factor Tu domain 2 SynA1562_RS01675 PF00177 Ribosomal protein S7p/S5e SynA1562_RS01680 PF00164 Ribosomal protein S12/S23 SynA1562_RS01685 PF01521 Iron-sulphur cluster biosynthesis SynA1562_RS01695 PF00310 Glutamine amidotransferases class-II SynA1562_RS01695 PF04898 Glutamate synthase central domain SynA1562_RS01695 PF01645 Conserved region in glutamate synthase SynA1562_RS01695 PF01493 GXGXG motif SynA1562_RS01705 PF04055 Radical SAM superfamily SynA1562_RS01715 PF01077 Nitrite and sulphite reductase 4Fe-4S domain SynA1562_RS01715 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SynA1562_RS01725 PF00223 Photosystem I psaA/psaB protein SynA1562_RS01730 PF00223 Photosystem I psaA/psaB protein SynA1562_RS01750 PF00873 AcrB/AcrD/AcrF family SynA1562_RS01755 PF02605 Photosystem I reaction centre subunit XI SynA1562_RS01760 PF00796 Photosystem I reaction centre subunit VIII SynA1562_RS01770 PF00535 Glycosyl transferase family 2 SynA1562_RS01790 PF00842 Alanine racemase, C-terminal domain SynA1562_RS01790 PF01168 Alanine racemase, N-terminal domain SynA1562_RS01800 PF00472 RF-1 domain SynA1562_RS01800 PF03462 PCRF domain SynA1562_RS01805 PF01197 Ribosomal protein L31 SynA1562_RS01810 PF00380 Ribosomal protein S9/S16 SynA1562_RS01815 PF00572 Ribosomal protein L13 SynA1562_RS01820 PF01416 tRNA pseudouridine synthase SynA1562_RS01825 PF01196 Ribosomal protein L17 SynA1562_RS01830 PF01000 RNA polymerase Rpb3/RpoA insert domain SynA1562_RS01830 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain SynA1562_RS01830 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain SynA1562_RS01835 PF00411 Ribosomal protein S11 SynA1562_RS01840 PF00416 Ribosomal protein S13/S18 SynA1562_RS01845 PF00444 Ribosomal protein L36 SynA1562_RS01855 PF00344 SecY translocase SynA1562_RS01860 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A SynA1562_RS01865 PF00333 Ribosomal protein S5, N-terminal domain SynA1562_RS01865 PF03719 Ribosomal protein S5, C-terminal domain SynA1562_RS01870 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast SynA1562_RS01875 PF00347 Ribosomal protein L6 SynA1562_RS01880 PF00410 Ribosomal protein S8 SynA1562_RS01885 PF00673 ribosomal L5P family C-terminus SynA1562_RS01885 PF00281 Ribosomal protein L5 SynA1562_RS01890 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 SynA1562_RS01890 PF00467 KOW motif SynA1562_RS01895 PF00238 Ribosomal protein L14p/L23e SynA1562_RS01900 PF00366 Ribosomal protein S17 SynA1562_RS01905 PF00831 Ribosomal L29 protein SynA1562_RS01910 PF00252 Ribosomal protein L16p/L10e SynA1562_RS01915 PF07650 KH domain SynA1562_RS01915 PF00189 Ribosomal protein S3, C-terminal domain SynA1562_RS01920 PF00237 Ribosomal protein L22p/L17e SynA1562_RS01925 PF00203 Ribosomal protein S19 SynA1562_RS01930 PF03947 Ribosomal Proteins L2, C-terminal domain SynA1562_RS01930 PF00181 Ribosomal Proteins L2, RNA binding domain SynA1562_RS01935 PF00276 Ribosomal protein L23 SynA1562_RS01940 PF00573 Ribosomal protein L4/L1 family SynA1562_RS01945 PF00297 Ribosomal protein L3 SynA1562_RS01950 PF11909 NADH-quinone oxidoreductase cyanobacterial subunit N SynA1562_RS01975 PF00154 recA bacterial DNA recombination protein SynA1562_RS02000 PF01593 Flavin containing amine oxidoreductase SynA1562_RS02005 PF03881 Fructosamine kinase SynA1562_RS02020 PF00581 Rhodanese-like domain SynA1562_RS02020 PF00899 ThiF family SynA1562_RS02025 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP SynA1562_RS02030 PF02540 NAD synthase SynA1562_RS02035 PF02675 S-adenosylmethionine decarboxylase SynA1562_RS02055 PF00311 Phosphoenolpyruvate carboxylase SynA1562_RS02060 PF04107 Glutamate-cysteine ligase family 2(GCS2) SynA1562_RS02065 PF00425 chorismate binding enzyme SynA1562_RS02065 PF04715 Anthranilate synthase component I, N terminal region SynA1562_RS02070 PF02531 PsaD SynA1562_RS02080 PF01098 Cell cycle protein SynA1562_RS02085 PF10609 NUBPL iron-transfer P-loop NTPase SynA1562_RS02085 PF01883 Iron-sulfur cluster assembly protein SynA1562_RS02090 PF01218 Coproporphyrinogen III oxidase SynA1562_RS02110 PF00570 HRDC domain SynA1562_RS02110 PF01612 3'-5' exonuclease SynA1562_RS02140 PF00248 Aldo/keto reductase family SynA1562_RS02150 PF02769 AIR synthase related protein, C-terminal domain SynA1562_RS02150 PF00586 AIR synthase related protein, N-terminal domain SynA1562_RS02155 PF03330 Lytic transglycolase SynA1562_RS02160 PF02569 Pantoate-beta-alanine ligase SynA1562_RS02160 PF02224 Cytidylate kinase SynA1562_RS02165 PF01451 Low molecular weight phosphotyrosine protein phosphatase SynA1562_RS02175 PF03130 PBS lyase HEAT-like repeat SynA1562_RS02180 PF06206 CpeT/CpcT family (DUF1001) SynA1562_RS02185 PF00502 Phycobilisome protein SynA1562_RS02190 PF00502 Phycobilisome protein SynA1562_RS02195 PF05996 Ferredoxin-dependent bilin reductase SynA1562_RS02200 PF05996 Ferredoxin-dependent bilin reductase SynA1562_RS02205 PF09367 CpeS-like protein SynA1562_RS02215 PF00502 Phycobilisome protein SynA1562_RS02220 PF00502 Phycobilisome protein SynA1562_RS02225 PF10847 Protein of unknown function (DUF2656) SynA1562_RS02255 PF12833 Helix-turn-helix domain SynA1562_RS02270 PF00427 Phycobilisome Linker polypeptide SynA1562_RS02275 PF00502 Phycobilisome protein SynA1562_RS02280 PF00502 Phycobilisome protein SynA1562_RS02305 PF06206 CpeT/CpcT family (DUF1001) SynA1562_RS02310 PF09367 CpeS-like protein SynA1562_RS02320 PF00427 Phycobilisome Linker polypeptide SynA1562_RS02320 PF01383 CpcD/allophycocyanin linker domain SynA1562_RS02325 PF00427 Phycobilisome Linker polypeptide SynA1562_RS02330 PF00427 Phycobilisome Linker polypeptide SynA1562_RS02330 PF01383 CpcD/allophycocyanin linker domain SynA1562_RS02340 PF00427 Phycobilisome Linker polypeptide SynA1562_RS02385 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SynA1562_RS02390 PF02772 S-adenosylmethionine synthetase, central domain SynA1562_RS02390 PF02773 S-adenosylmethionine synthetase, C-terminal domain SynA1562_RS02390 PF00438 S-adenosylmethionine synthetase, N-terminal domain SynA1562_RS02400 PF00575 S1 RNA binding domain SynA1562_RS02405 PF03477 ATP cone domain SynA1562_RS02410 PF01405 Photosystem II reaction centre T protein SynA1562_RS02415 PF00421 Photosystem II protein SynA1562_RS02425 PF05151 Photosystem II reaction centre M protein (PsbM) SynA1562_RS02430 PF00582 Universal stress protein family SynA1562_RS02445 PF05175 Methyltransferase small domain SynA1562_RS02450 PF03481 Putative GTP-binding controlling metal-binding SynA1562_RS02450 PF01300 Telomere recombination SynA1562_RS02465 PF00196 Bacterial regulatory proteins, luxR family SynA1562_RS02465 PF00072 Response regulator receiver domain SynA1562_RS02470 PF03776 Septum formation topological specificity factor MinE SynA1562_RS02475 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain SynA1562_RS02480 PF03775 Septum formation inhibitor MinC, C-terminal domain SynA1562_RS02485 PF01966 HD domain SynA1562_RS02490 PF00595 PDZ domain SynA1562_RS02490 PF03572 Peptidase family S41 SynA1562_RS02495 PF00033 Cytochrome b/b6/petB SynA1562_RS02500 PF00032 Cytochrome b(C-terminal)/b6/petD SynA1562_RS02535 PF13419 Haloacid dehalogenase-like hydrolase SynA1562_RS02540 PF00596 Class II Aldolase and Adducin N-terminal domain SynA1562_RS02545 PF01008 Initiation factor 2 subunit family SynA1562_RS02550 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain SynA1562_RS02550 PF06827 Zinc finger found in FPG and IleRS SynA1562_RS02550 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain SynA1562_RS02555 PF02427 Photosystem I reaction centre subunit IV / PsaE SynA1562_RS02565 PF09382 RQC domain SynA1562_RS02565 PF16124 RecQ zinc-binding SynA1562_RS02565 PF00570 HRDC domain SynA1562_RS02565 PF00271 Helicase conserved C-terminal domain SynA1562_RS02565 PF00270 DEAD/DEAH box helicase SynA1562_RS02570 PF01476 LysM domain SynA1562_RS02570 PF05257 CHAP domain SynA1562_RS02575 PF00171 Aldehyde dehydrogenase family SynA1562_RS02580 PF00128 Alpha amylase, catalytic domain SynA1562_RS02580 PF16657 Maltogenic Amylase, C-terminal domain SynA1562_RS02590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SynA1562_RS02590 PF00512 His Kinase A (phospho-acceptor) domain SynA1562_RS02590 PF00989 PAS fold SynA1562_RS02590 PF11808 Phosphate regulon sensor protein PhoR SynA1562_RS02600 PF01266 FAD dependent oxidoreductase SynA1562_RS02600 PF16901 C-terminal domain of alpha-glycerophosphate oxidase SynA1562_RS02605 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SynA1562_RS02605 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SynA1562_RS02610 PF16657 Maltogenic Amylase, C-terminal domain SynA1562_RS02610 PF00128 Alpha amylase, catalytic domain SynA1562_RS02610 PF02903 Alpha amylase, N-terminal ig-like domain SynA1562_RS02625 PF01220 Dehydroquinase class II SynA1562_RS02635 PF00916 Sulfate permease family SynA1562_RS02635 PF01740 STAS domain SynA1562_RS02640 PF07884 Vitamin K epoxide reductase family SynA1562_RS02645 PF01556 DnaJ C terminal domain SynA1562_RS02645 PF00226 DnaJ domain SynA1562_RS02650 PF00490 Delta-aminolevulinic acid dehydratase SynA1562_RS02660 PF01713 Smr domain SynA1562_RS02660 PF00488 MutS domain V SynA1562_RS02665 PF00005 ABC transporter SynA1562_RS02665 PF17912 MalK OB fold domain SynA1562_RS02670 PF01018 GTP1/OBG SynA1562_RS02670 PF01926 50S ribosome-binding GTPase SynA1562_RS02685 PF00005 ABC transporter SynA1562_RS02685 PF16326 ABC transporter C-terminal domain SynA1562_RS02685 PF12848 ABC transporter SynA1562_RS02695 PF13409 Glutathione S-transferase, N-terminal domain SynA1562_RS02700 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family SynA1562_RS02715 PF00124 Photosynthetic reaction centre protein SynA1562_RS02720 PF01679 Proteolipid membrane potential modulator SynA1562_RS02830 PF00589 Phage integrase family SynA1562_RS02875 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SynA1562_RS02880 PF00459 Inositol monophosphatase family SynA1562_RS02885 PF00575 S1 RNA binding domain SynA1562_RS02885 PF03725 3' exoribonuclease family, domain 2 SynA1562_RS02885 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain SynA1562_RS02885 PF00013 KH domain SynA1562_RS02885 PF01138 3' exoribonuclease family, domain 1 SynA1562_RS02890 PF00253 Ribosomal protein S14p/S29e SynA1562_RS02895 PF13180 PDZ domain SynA1562_RS02895 PF02163 Peptidase family M50 SynA1562_RS02900 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SynA1562_RS02900 PF02403 Seryl-tRNA synthetase N-terminal domain SynA1562_RS02910 PF17862 AAA+ lid domain SynA1562_RS02910 PF06480 FtsH Extracellular SynA1562_RS02910 PF01434 Peptidase family M41 SynA1562_RS02910 PF00004 ATPase family associated with various cellular activities (AAA) SynA1562_RS02920 PF02096 60Kd inner membrane protein SynA1562_RS02930 PF00825 Ribonuclease P SynA1562_RS02935 PF00468 Ribosomal protein L34 SynA1562_RS02950 PF01343 Peptidase family S49 SynA1562_RS02955 PF00892 EamA-like transporter family SynA1562_RS02960 PF13439 Glycosyltransferase Family 4 SynA1562_RS02960 PF00534 Glycosyl transferases group 1 SynA1562_RS02965 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase SynA1562_RS02975 PF04012 PspA/IM30 family SynA1562_RS02980 PF00085 Thioredoxin SynA1562_RS02985 PF00155 Aminotransferase class I and II SynA1562_RS02990 PF02237 Biotin protein ligase C terminal domain SynA1562_RS02990 PF03099 Biotin/lipoate A/B protein ligase family SynA1562_RS02990 PF08279 HTH domain SynA1562_RS02995 PF04225 Opacity-associated protein A LysM-like domain SynA1562_RS02995 PF01551 Peptidase family M23 SynA1562_RS03010 PF00072 Response regulator receiver domain SynA1562_RS03010 PF00486 Transcriptional regulatory protein, C terminal SynA1562_RS03015 PF12704 MacB-like periplasmic core domain SynA1562_RS03015 PF02687 FtsX-like permease family SynA1562_RS03015 PF00005 ABC transporter SynA1562_RS03020 PF00361 Proton-conducting membrane transporter SynA1562_RS03025 PF01131 DNA topoisomerase SynA1562_RS03025 PF01751 Toprim domain SynA1562_RS03025 PF13368 Topoisomerase C-terminal repeat SynA1562_RS03060 PF00677 Lumazine binding domain SynA1562_RS03070 PF00510 Cytochrome c oxidase subunit III SynA1562_RS03075 PF00115 Cytochrome C and Quinol oxidase polypeptide I SynA1562_RS03080 PF02790 Cytochrome C oxidase subunit II, transmembrane domain SynA1562_RS03080 PF00116 Cytochrome C oxidase subunit II, periplasmic domain SynA1562_RS03085 PF02628 Cytochrome oxidase assembly protein SynA1562_RS03090 PF01040 UbiA prenyltransferase family SynA1562_RS03095 PF13732 Domain of unknown function (DUF4162) SynA1562_RS03095 PF00005 ABC transporter SynA1562_RS03110 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase SynA1562_RS03115 PF00118 TCP-1/cpn60 chaperonin family SynA1562_RS03130 PF02254 TrkA-N domain SynA1562_RS03130 PF00999 Sodium/hydrogen exchanger family SynA1562_RS03130 PF02080 TrkA-C domain SynA1562_RS03140 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase SynA1562_RS03145 PF17676 LD-carboxypeptidase C-terminal domain SynA1562_RS03145 PF02016 LD-carboxypeptidase N-terminal domain SynA1562_RS03150 PF01040 UbiA prenyltransferase family SynA1562_RS03155 PF02541 Ppx/GppA phosphatase family SynA1562_RS03170 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SynA1562_RS03175 PF01790 Prolipoprotein diacylglyceryl transferase SynA1562_RS03180 PF16639 Apocytochrome F, N-terminal SynA1562_RS03180 PF01333 Apocytochrome F, C-terminal SynA1562_RS03185 PF00355 Rieske [2Fe-2S] domain SynA1562_RS03195 PF00902 Sec-independent protein translocase protein (TatC) SynA1562_RS03200 PF05670 NFACT protein RNA binding domain SynA1562_RS03205 PF00625 Guanylate kinase SynA1562_RS03210 PF01701 Photosystem I reaction centre subunit IX / PsaJ SynA1562_RS03215 PF02507 Photosystem I reaction centre subunit III SynA1562_RS03220 PF00814 Glycoprotease family SynA1562_RS03225 PF00762 Ferrochelatase SynA1562_RS03230 PF00437 Type II/IV secretion system protein SynA1562_RS03235 PF02350 UDP-N-acetylglucosamine 2-epimerase SynA1562_RS03255 PF00749 tRNA synthetases class I (E and Q), catalytic domain SynA1562_RS03275 PF01245 Ribosomal protein L19 SynA1562_RS03285 PF00557 Metallopeptidase family M24 SynA1562_RS03290 PF00106 short chain dehydrogenase SynA1562_RS03300 PF07085 DRTGG domain SynA1562_RS03315 PF04461 Protein of unknown function (DUF520) SynA1562_RS03330 PF00156 Phosphoribosyl transferase domain SynA1562_RS03340 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SynA1562_RS03350 PF00202 Aminotransferase class-III SynA1562_RS03355 PF01565 FAD binding domain SynA1562_RS03355 PF02913 FAD linked oxidases, C-terminal domain SynA1562_RS03360 PF03372 Endonuclease/Exonuclease/phosphatase family SynA1562_RS03380 PF06480 FtsH Extracellular SynA1562_RS03380 PF00004 ATPase family associated with various cellular activities (AAA) SynA1562_RS03380 PF17862 AAA+ lid domain SynA1562_RS03380 PF01434 Peptidase family M41 SynA1562_RS03385 PF01969 Protein of unknown function DUF111 SynA1562_RS03405 PF00005 ABC transporter SynA1562_RS03405 PF08402 TOBE domain SynA1562_RS03415 PF02492 CobW/HypB/UreG, nucleotide-binding domain SynA1562_RS03415 PF07683 Cobalamin synthesis protein cobW C-terminal domain SynA1562_RS03420 PF01329 Pterin 4 alpha carbinolamine dehydratase SynA1562_RS03425 PF01894 Uncharacterised protein family UPF0047 SynA1562_RS03440 PF02074 Carboxypeptidase Taq (M32) metallopeptidase SynA1562_RS03445 PF00719 Inorganic pyrophosphatase SynA1562_RS03455 PF03900 Porphobilinogen deaminase, C-terminal domain SynA1562_RS03455 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain SynA1562_RS03465 PF04545 Sigma-70, region 4 SynA1562_RS03465 PF04539 Sigma-70 region 3 SynA1562_RS03465 PF04542 Sigma-70 region 2 SynA1562_RS03465 PF00140 Sigma-70 factor, region 1.2 SynA1562_RS03470 PF18319 PriA DNA helicase Cys-rich region (CRR) domain SynA1562_RS03470 PF18074 Primosomal protein N C-terminal domain SynA1562_RS03470 PF17764 3′ DNA-binding domain (3′BD) SynA1562_RS03470 PF00271 Helicase conserved C-terminal domain SynA1562_RS03470 PF00270 DEAD/DEAH box helicase SynA1562_RS03480 PF00696 Amino acid kinase family SynA1562_RS03485 PF11016 Protein of unknown function (DUF2854) SynA1562_RS03500 PF02571 Precorrin-6x reductase CbiJ/CobK SynA1562_RS03505 PF03091 CutA1 divalent ion tolerance protein SynA1562_RS03510 PF00294 pfkB family carbohydrate kinase SynA1562_RS03515 PF00709 Adenylosuccinate synthetase SynA1562_RS03520 PF13326 Photosystem II Pbs27 SynA1562_RS03525 PF03129 Anticodon binding domain SynA1562_RS03525 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SynA1562_RS03525 PF04073 Aminoacyl-tRNA editing domain SynA1562_RS03540 PF00719 Inorganic pyrophosphatase SynA1562_RS03560 PF10502 Signal peptidase, peptidase S26 SynA1562_RS03570 PF00300 Histidine phosphatase superfamily (branch 1) SynA1562_RS03575 PF02517 CPBP intramembrane metalloprotease SynA1562_RS03585 PF03793 PASTA domain SynA1562_RS03585 PF03717 Penicillin-binding Protein dimerisation domain SynA1562_RS03585 PF00905 Penicillin binding protein transpeptidase domain SynA1562_RS03590 PF13202 EF hand SynA1562_RS03590 PF00923 Transaldolase/Fructose-6-phosphate aldolase SynA1562_RS03605 PF00875 DNA photolyase SynA1562_RS03605 PF03441 FAD binding domain of DNA photolyase SynA1562_RS03610 PF01494 FAD binding domain SynA1562_RS03615 PF01765 Ribosome recycling factor SynA1562_RS03620 PF00696 Amino acid kinase family SynA1562_RS03630 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP SynA1562_RS03630 PF12557 Cob(I)alamin adenosyltransferase N terminal SynA1562_RS03635 PF01209 ubiE/COQ5 methyltransferase family SynA1562_RS03645 PF00762 Ferrochelatase SynA1562_RS03650 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SynA1562_RS03650 PF00205 Thiamine pyrophosphate enzyme, central domain SynA1562_RS03650 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SynA1562_RS03680 PF02578 Multi-copper polyphenol oxidoreductase laccase SynA1562_RS03690 PF00575 S1 RNA binding domain SynA1562_RS03700 PF11266 Long-chain fatty aldehyde decarbonylase SynA1562_RS03710 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit SynA1562_RS03720 PF01227 GTP cyclohydrolase I SynA1562_RS03725 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase SynA1562_RS03730 PF00571 CBS domain SynA1562_RS03730 PF02163 Peptidase family M50 SynA1562_RS03735 PF03099 Biotin/lipoate A/B protein ligase family SynA1562_RS03740 PF01925 Sulfite exporter TauE/SafE SynA1562_RS03750 PF07465 Photosystem I protein M (PsaM) SynA1562_RS03760 PF00106 short chain dehydrogenase SynA1562_RS03765 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family SynA1562_RS03770 PF00148 Nitrogenase component 1 type Oxidoreductase SynA1562_RS03770 PF08369 Proto-chlorophyllide reductase 57 kD subunit SynA1562_RS03775 PF00148 Nitrogenase component 1 type Oxidoreductase SynA1562_RS03790 PF01725 Ham1 family SynA1562_RS03795 PF00936 BMC domain SynA1562_RS03800 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain SynA1562_RS03800 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain SynA1562_RS03805 PF00101 Ribulose bisphosphate carboxylase, small chain SynA1562_RS03830 PF00936 BMC domain SynA1562_RS03835 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus SynA1562_RS03835 PF00361 Proton-conducting membrane transporter SynA1562_RS03835 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus SynA1562_RS03840 PF00361 Proton-conducting membrane transporter SynA1562_RS03855 PF00004 ATPase family associated with various cellular activities (AAA) SynA1562_RS03855 PF17866 AAA lid domain SynA1562_RS03870 PF07685 CobB/CobQ-like glutamine amidotransferase domain SynA1562_RS03870 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain SynA1562_RS03880 PF02545 Maf-like protein SynA1562_RS03905 PF00163 Ribosomal protein S4/S9 N-terminal domain SynA1562_RS03905 PF01479 S4 domain SynA1562_RS03910 PF01809 Putative membrane protein insertion efficiency factor SynA1562_RS03920 PF01225 Mur ligase family, catalytic domain SynA1562_RS03920 PF02875 Mur ligase family, glutamate ligase domain SynA1562_RS03920 PF08245 Mur ligase middle domain SynA1562_RS03945 PF07238 PilZ domain SynA1562_RS03945 PF00535 Glycosyl transferase family 2 SynA1562_RS03945 PF03552 Cellulose synthase SynA1562_RS03955 PF01106 NifU-like domain SynA1562_RS03960 PF06039 Malate:quinone oxidoreductase (Mqo) SynA1562_RS03965 PF00893 Small Multidrug Resistance protein SynA1562_RS03970 PF06421 GTP-binding protein LepA C-terminus SynA1562_RS03970 PF03144 Elongation factor Tu domain 2 SynA1562_RS03970 PF00009 Elongation factor Tu GTP binding domain SynA1562_RS03970 PF00679 Elongation factor G C-terminus SynA1562_RS03985 PF00989 PAS fold SynA1562_RS03985 PF18698 Histidine kinase sensor domain SynA1562_RS03985 PF00672 HAMP domain SynA1562_RS03985 PF00512 His Kinase A (phospho-acceptor) domain SynA1562_RS03985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SynA1562_RS03995 PF12911 N-terminal TM domain of oligopeptide transport permease C SynA1562_RS03995 PF00528 Binding-protein-dependent transport system inner membrane component SynA1562_RS04010 PF00588 SpoU rRNA Methylase family SynA1562_RS04010 PF12105 SpoU, rRNA methylase, C-terminal SynA1562_RS04020 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain SynA1562_RS04025 PF01029 NusB family SynA1562_RS04025 PF01189 16S rRNA methyltransferase RsmB/F SynA1562_RS04030 PF00905 Penicillin binding protein transpeptidase domain SynA1562_RS04030 PF00912 Transglycosylase SynA1562_RS04035 PF01040 UbiA prenyltransferase family SynA1562_RS04045 PF00977 Histidine biosynthesis protein SynA1562_RS04050 PF01209 ubiE/COQ5 methyltransferase family SynA1562_RS04065 PF02091 Glycyl-tRNA synthetase alpha subunit SynA1562_RS04085 PF00128 Alpha amylase, catalytic domain SynA1562_RS04085 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SynA1562_RS04110 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SynA1562_RS04110 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SynA1562_RS04110 PF00205 Thiamine pyrophosphate enzyme, central domain SynA1562_RS04140 PF12706 Beta-lactamase superfamily domain SynA1562_RS04140 PF00753 Metallo-beta-lactamase superfamily SynA1562_RS04145 PF00395 S-layer homology domain SynA1562_RS04145 PF04966 Carbohydrate-selective porin, OprB family SynA1562_RS04160 PF00534 Glycosyl transferases group 1 SynA1562_RS04165 PF02397 Bacterial sugar transferase SynA1562_RS04170 PF03186 CobD/Cbib protein SynA1562_RS04175 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain SynA1562_RS04175 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain SynA1562_RS04180 PF00574 Clp protease SynA1562_RS04185 PF00574 Clp protease SynA1562_RS04195 PF04055 Radical SAM superfamily SynA1562_RS04205 PF02548 Ketopantoate hydroxymethyltransferase SynA1562_RS04215 PF12327 FtsZ family, C-terminal domain SynA1562_RS04215 PF00091 Tubulin/FtsZ family, GTPase domain SynA1562_RS04230 PF07478 D-ala D-ala ligase C-terminus SynA1562_RS04230 PF01820 D-ala D-ala ligase N-terminus SynA1562_RS04235 PF00919 Uncharacterized protein family UPF0004 SynA1562_RS04235 PF01938 TRAM domain SynA1562_RS04235 PF04055 Radical SAM superfamily SynA1562_RS04240 PF13378 Enolase C-terminal domain-like SynA1562_RS04240 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain SynA1562_RS04275 PF02875 Mur ligase family, glutamate ligase domain SynA1562_RS04275 PF08245 Mur ligase middle domain SynA1562_RS04280 PF00202 Aminotransferase class-III SynA1562_RS04285 PF00202 Aminotransferase class-III SynA1562_RS04290 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SynA1562_RS04305 PF00588 SpoU rRNA Methylase family SynA1562_RS04305 PF08032 RNA 2'-O ribose methyltransferase substrate binding SynA1562_RS04310 PF07992 Pyridine nucleotide-disulphide oxidoreductase SynA1562_RS04310 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SynA1562_RS04315 PF00218 Indole-3-glycerol phosphate synthase SynA1562_RS04330 PF09055 Nickel-containing superoxide dismutase SynA1562_RS04335 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SynA1562_RS04345 PF00795 Carbon-nitrogen hydrolase SynA1562_RS04355 PF03853 YjeF-related protein N-terminus SynA1562_RS04355 PF01256 Carbohydrate kinase SynA1562_RS04360 PF00140 Sigma-70 factor, region 1.2 SynA1562_RS04360 PF04542 Sigma-70 region 2 SynA1562_RS04360 PF04545 Sigma-70, region 4 SynA1562_RS04360 PF04539 Sigma-70 region 3 SynA1562_RS04365 PF00676 Dehydrogenase E1 component SynA1562_RS04375 PF02978 Signal peptide binding domain SynA1562_RS04375 PF00448 SRP54-type protein, GTPase domain SynA1562_RS04375 PF02881 SRP54-type protein, helical bundle domain SynA1562_RS04380 PF00886 Ribosomal protein S16 SynA1562_RS04385 PF02562 PhoH-like protein SynA1562_RS04390 PF01027 Inhibitor of apoptosis-promoting Bax1 SynA1562_RS04400 PF01926 50S ribosome-binding GTPase SynA1562_RS04400 PF07650 KH domain SynA1562_RS04415 PF01746 tRNA (Guanine-1)-methyltransferase SynA1562_RS04425 PF00731 AIR carboxylase SynA1562_RS04445 PF17792 ThiD2 family SynA1562_RS04445 PF02581 Thiamine monophosphate synthase SynA1562_RS04450 PF01687 Riboflavin kinase SynA1562_RS04450 PF06574 FAD synthetase SynA1562_RS04460 PF01975 Survival protein SurE SynA1562_RS04465 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain SynA1562_RS04465 PF01409 tRNA synthetases class II core domain (F) SynA1562_RS04480 PF01513 ATP-NAD kinase SynA1562_RS04485 PF00486 Transcriptional regulatory protein, C terminal SynA1562_RS04485 PF00072 Response regulator receiver domain SynA1562_RS04495 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SynA1562_RS04520 PF01872 RibD C-terminal domain SynA1562_RS04520 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SynA1562_RS04530 PF02586 SOS response associated peptidase (SRAP) SynA1562_RS04535 PF01434 Peptidase family M41 SynA1562_RS04535 PF17862 AAA+ lid domain SynA1562_RS04535 PF00004 ATPase family associated with various cellular activities (AAA) SynA1562_RS04535 PF06480 FtsH Extracellular SynA1562_RS04540 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SynA1562_RS04540 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SynA1562_RS04555 PF00717 Peptidase S24-like SynA1562_RS04555 PF01726 LexA DNA binding domain SynA1562_RS04590 PF00589 Phage integrase family SynA1562_RS04590 PF13495 Phage integrase, N-terminal SAM-like domain SynA1562_RS04640 PF01042 Endoribonuclease L-PSP SynA1562_RS04645 PF00753 Metallo-beta-lactamase superfamily SynA1562_RS04645 PF16123 Hydroxyacylglutathione hydrolase C-terminus SynA1562_RS04650 PF01634 ATP phosphoribosyltransferase SynA1562_RS04655 PF00005 ABC transporter SynA1562_RS04655 PF00664 ABC transporter transmembrane region SynA1562_RS04660 PF00583 Acetyltransferase (GNAT) family SynA1562_RS04665 PF00535 Glycosyl transferase family 2 SynA1562_RS04675 PF13180 PDZ domain SynA1562_RS04680 PF11638 DnaA N-terminal domain SynA1562_RS04680 PF00308 Bacterial dnaA protein SynA1562_RS04680 PF08299 Bacterial dnaA protein helix-turn-helix SynA1562_RS04700 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SynA1562_RS04700 PF07992 Pyridine nucleotide-disulphide oxidoreductase SynA1562_RS04705 PF00732 GMC oxidoreductase SynA1562_RS04705 PF05199 GMC oxidoreductase SynA1562_RS04710 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SynA1562_RS04710 PF00205 Thiamine pyrophosphate enzyme, central domain SynA1562_RS04710 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SynA1562_RS04715 PF00510 Cytochrome c oxidase subunit III SynA1562_RS04720 PF00115 Cytochrome C and Quinol oxidase polypeptide I SynA1562_RS04725 PF02790 Cytochrome C oxidase subunit II, transmembrane domain SynA1562_RS04725 PF00116 Cytochrome C oxidase subunit II, periplasmic domain SynA1562_RS04740 PF01699 Sodium/calcium exchanger protein SynA1562_RS04745 PF00916 Sulfate permease family SynA1562_RS04745 PF01740 STAS domain SynA1562_RS04750 PF01979 Amidohydrolase family SynA1562_RS04765 PF10716 NADH dehydrogenase transmembrane subunit SynA1562_RS04775 PF00290 Tryptophan synthase alpha chain SynA1562_RS04790 PF13442 Cytochrome C oxidase, cbb3-type, subunit III SynA1562_RS04825 PF04539 Sigma-70 region 3 SynA1562_RS04825 PF00140 Sigma-70 factor, region 1.2 SynA1562_RS04825 PF04542 Sigma-70 region 2 SynA1562_RS04825 PF04545 Sigma-70, region 4 SynA1562_RS04845 PF01502 Phosphoribosyl-AMP cyclohydrolase SynA1562_RS04845 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase SynA1562_RS04855 PF00230 Major intrinsic protein SynA1562_RS04860 PF02861 Clp amino terminal domain, pathogenicity island component SynA1562_RS04860 PF17871 AAA lid domain SynA1562_RS04860 PF00004 ATPase family associated with various cellular activities (AAA) SynA1562_RS04860 PF10431 C-terminal, D2-small domain, of ClpB protein SynA1562_RS04860 PF07724 AAA domain (Cdc48 subfamily) SynA1562_RS04910 PF13442 Cytochrome C oxidase, cbb3-type, subunit III SynA1562_RS04915 PF00127 Copper binding proteins, plastocyanin/azurin family SynA1562_RS04925 PF01208 Uroporphyrinogen decarboxylase (URO-D) SynA1562_RS04930 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SynA1562_RS04930 PF02806 Alpha amylase, C-terminal all-beta domain SynA1562_RS04930 PF00128 Alpha amylase, catalytic domain SynA1562_RS04955 PF10726 Protein of function (DUF2518) SynA1562_RS04965 PF00480 ROK family SynA1562_RS04970 PF00171 Aldehyde dehydrogenase family SynA1562_RS04985 PF01432 Peptidase family M3 SynA1562_RS04990 PF00361 Proton-conducting membrane transporter SynA1562_RS04995 PF08544 GHMP kinases C terminal SynA1562_RS04995 PF00288 GHMP kinases N terminal domain SynA1562_RS05000 PF02685 Glucokinase SynA1562_RS05010 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SynA1562_RS05010 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SynA1562_RS05010 PF03129 Anticodon binding domain SynA1562_RS05025 PF00579 tRNA synthetases class I (W and Y) SynA1562_RS05040 PF16916 Dimerisation domain of Zinc Transporter SynA1562_RS05040 PF01545 Cation efflux family SynA1562_RS05050 PF00124 Photosynthetic reaction centre protein SynA1562_RS05075 PF01202 Shikimate kinase SynA1562_RS05150 PF01165 Ribosomal protein S21 SynA1562_RS05230 PF00355 Rieske [2Fe-2S] domain SynA1562_RS05230 PF00848 Ring hydroxylating alpha subunit (catalytic domain) SynA1562_RS05235 PF00005 ABC transporter SynA1562_RS05240 PF00528 Binding-protein-dependent transport system inner membrane component SynA1562_RS05250 PF02492 CobW/HypB/UreG, nucleotide-binding domain SynA1562_RS05255 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA SynA1562_RS05260 PF00491 Arginase family SynA1562_RS05290 PF00106 short chain dehydrogenase SynA1562_RS05295 PF00684 DnaJ central domain SynA1562_RS05295 PF01556 DnaJ C terminal domain SynA1562_RS05295 PF00226 DnaJ domain SynA1562_RS05360 PF00124 Photosynthetic reaction centre protein SynA1562_RS05375 PF10502 Signal peptidase, peptidase S26 SynA1562_RS05380 PF16582 Middle domain of thiamine pyrophosphate SynA1562_RS05380 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SynA1562_RS05380 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SynA1562_RS05385 PF00378 Enoyl-CoA hydratase/isomerase SynA1562_RS05390 PF01476 LysM domain SynA1562_RS05390 PF03734 L,D-transpeptidase catalytic domain SynA1562_RS05395 PF00534 Glycosyl transferases group 1 SynA1562_RS05395 PF08323 Starch synthase catalytic domain SynA1562_RS05405 PF08245 Mur ligase middle domain SynA1562_RS05405 PF01225 Mur ligase family, catalytic domain SynA1562_RS05405 PF02875 Mur ligase family, glutamate ligase domain SynA1562_RS05410 PF00132 Bacterial transferase hexapeptide (six repeats) SynA1562_RS05410 PF12804 MobA-like NTP transferase domain SynA1562_RS05420 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SynA1562_RS05425 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase SynA1562_RS05430 PF04029 2-phosphosulpholactate phosphatase SynA1562_RS05435 PF00795 Carbon-nitrogen hydrolase SynA1562_RS05440 PF01520 N-acetylmuramoyl-L-alanine amidase SynA1562_RS05445 PF01177 Asp/Glu/Hydantoin racemase SynA1562_RS05450 PF00348 Polyprenyl synthetase SynA1562_RS05455 PF13419 Haloacid dehalogenase-like hydrolase SynA1562_RS05460 PF00501 AMP-binding enzyme SynA1562_RS05460 PF16177 Acetyl-coenzyme A synthetase N-terminus SynA1562_RS05460 PF13193 AMP-binding enzyme C-terminal domain SynA1562_RS05470 PF00578 AhpC/TSA family SynA1562_RS05475 PF00929 Exonuclease SynA1562_RS05475 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SynA1562_RS05475 PF02811 PHP domain SynA1562_RS05475 PF07733 Bacterial DNA polymerase III alpha NTPase domain SynA1562_RS05475 PF14579 Helix-hairpin-helix motif SynA1562_RS05485 PF12849 PBP superfamily domain SynA1562_RS05490 PF12849 PBP superfamily domain SynA1562_RS05495 PF13545 Crp-like helix-turn-helix domain SynA1562_RS05515 PF01625 Peptide methionine sulfoxide reductase SynA1562_RS05525 PF00664 ABC transporter transmembrane region SynA1562_RS05525 PF00005 ABC transporter SynA1562_RS05530 PF00591 Glycosyl transferase family, a/b domain SynA1562_RS05530 PF02885 Glycosyl transferase family, helical bundle domain SynA1562_RS05535 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain SynA1562_RS05535 PF00117 Glutamine amidotransferase class-I SynA1562_RS05545 PF00636 Ribonuclease III domain SynA1562_RS05550 PF08032 RNA 2'-O ribose methyltransferase substrate binding SynA1562_RS05550 PF00588 SpoU rRNA Methylase family SynA1562_RS05560 PF01425 Amidase SynA1562_RS05565 PF07733 Bacterial DNA polymerase III alpha NTPase domain SynA1562_RS05565 PF01336 OB-fold nucleic acid binding domain SynA1562_RS05565 PF02811 PHP domain SynA1562_RS05565 PF14579 Helix-hairpin-helix motif SynA1562_RS05565 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SynA1562_RS05575 PF00312 Ribosomal protein S15 SynA1562_RS05580 PF07499 RuvA, C-terminal domain SynA1562_RS05580 PF01330 RuvA N terminal domain SynA1562_RS05585 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L SynA1562_RS05590 PF00361 Proton-conducting membrane transporter SynA1562_RS05620 PF00027 Cyclic nucleotide-binding domain SynA1562_RS05620 PF00520 Ion transport protein SynA1562_RS05625 PF02679 (2R)-phospho-3-sulfolactate synthase (ComA) SynA1562_RS05645 PF00892 EamA-like transporter family SynA1562_RS05650 PF01807 CHC2 zinc finger SynA1562_RS05650 PF10410 DnaB-helicase binding domain of primase SynA1562_RS05650 PF08275 DNA primase catalytic core, N-terminal domain SynA1562_RS05665 PF13438 Domain of unknown function (DUF4113) SynA1562_RS05665 PF00817 impB/mucB/samB family SynA1562_RS05665 PF11799 impB/mucB/samB family C-terminal domain SynA1562_RS05670 PF00717 Peptidase S24-like SynA1562_RS05690 PF02590 Predicted SPOUT methyltransferase SynA1562_RS05705 PF02021 Uncharacterised protein family UPF0102 SynA1562_RS05710 PF00398 Ribosomal RNA adenine dimethylase SynA1562_RS05715 PF00288 GHMP kinases N terminal domain SynA1562_RS05715 PF08544 GHMP kinases C terminal SynA1562_RS05725 PF02780 Transketolase, C-terminal domain SynA1562_RS05725 PF02779 Transketolase, pyrimidine binding domain SynA1562_RS05725 PF00364 Biotin-requiring enzyme SynA1562_RS05730 PF07549 SecD/SecF GG Motif SynA1562_RS05730 PF02355 Protein export membrane protein SynA1562_RS05735 PF02355 Protein export membrane protein SynA1562_RS05760 PF01594 AI-2E family transporter SynA1562_RS05765 PF03912 Psb28 protein SynA1562_RS05775 PF05419 GUN4-like SynA1562_RS05775 PF16416 ARM-like repeat domain, GUN4-N terminal SynA1562_RS05800 PF01209 ubiE/COQ5 methyltransferase family SynA1562_RS05805 PF00120 Glutamine synthetase, catalytic domain SynA1562_RS05805 PF03951 Glutamine synthetase, beta-Grasp domain SynA1562_RS05810 PF00502 Phycobilisome protein SynA1562_RS05815 PF00266 Aminotransferase class-V SynA1562_RS05820 PF14437 MafB19-like deaminase SynA1562_RS05825 PF00282 Pyridoxal-dependent decarboxylase conserved domain SynA1562_RS05835 PF01252 Signal peptidase (SPase) II SynA1562_RS05840 PF02632 BioY family SynA1562_RS05850 PF00675 Insulinase (Peptidase family M16) SynA1562_RS05850 PF05193 Peptidase M16 inactive domain SynA1562_RS05855 PF00675 Insulinase (Peptidase family M16) SynA1562_RS05855 PF05193 Peptidase M16 inactive domain SynA1562_RS05860 PF05996 Ferredoxin-dependent bilin reductase SynA1562_RS05875 PF00005 ABC transporter SynA1562_RS05885 PF00535 Glycosyl transferase family 2 SynA1562_RS05890 PF00318 Ribosomal protein S2 SynA1562_RS05895 PF00889 Elongation factor TS SynA1562_RS05905 PF00270 DEAD/DEAH box helicase SynA1562_RS05905 PF00271 Helicase conserved C-terminal domain SynA1562_RS05905 PF17191 RecG wedge domain SynA1562_RS05910 PF01427 D-ala-D-ala dipeptidase SynA1562_RS05915 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain SynA1562_RS05915 PF01077 Nitrite and sulphite reductase 4Fe-4S domain SynA1562_RS05920 PF02092 Glycyl-tRNA synthetase beta subunit SynA1562_RS05930 PF01494 FAD binding domain SynA1562_RS05940 PF12392 Collagenase SynA1562_RS05940 PF01136 Peptidase family U32 SynA1562_RS05945 PF00009 Elongation factor Tu GTP binding domain SynA1562_RS05945 PF14492 Elongation Factor G, domain II SynA1562_RS05945 PF00679 Elongation factor G C-terminus SynA1562_RS05945 PF03144 Elongation factor Tu domain 2 SynA1562_RS05960 PF00005 ABC transporter SynA1562_RS05970 PF01578 Cytochrome C assembly protein SynA1562_RS05985 PF00834 Ribulose-phosphate 3 epimerase family SynA1562_RS05990 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded SynA1562_RS05995 PF01488 Shikimate / quinate 5-dehydrogenase SynA1562_RS05995 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain SynA1562_RS05995 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain SynA1562_RS06000 PF00483 Nucleotidyl transferase SynA1562_RS06005 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SynA1562_RS06005 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain SynA1562_RS06010 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase SynA1562_RS06025 PF00920 Dehydratase family SynA1562_RS06040 PF00805 Pentapeptide repeats (8 copies) SynA1562_RS06045 PF07683 Cobalamin synthesis protein cobW C-terminal domain SynA1562_RS06045 PF02492 CobW/HypB/UreG, nucleotide-binding domain SynA1562_RS06060 PF00106 short chain dehydrogenase SynA1562_RS06070 PF03641 Possible lysine decarboxylase SynA1562_RS06075 PF00106 short chain dehydrogenase SynA1562_RS06110 PF17975 Ribonucleotide reductase alpha domain SynA1562_RS06115 PF13649 Methyltransferase domain SynA1562_RS06120 PF16658 Class II release factor RF3, C-terminal domain SynA1562_RS06120 PF00009 Elongation factor Tu GTP binding domain SynA1562_RS06135 PF01430 Hsp33 protein SynA1562_RS06140 PF00005 ABC transporter SynA1562_RS06150 PF04452 RNA methyltransferase SynA1562_RS06160 PF01940 Integral membrane protein DUF92 SynA1562_RS06165 PF04545 Sigma-70, region 4 SynA1562_RS06165 PF00140 Sigma-70 factor, region 1.2 SynA1562_RS06165 PF04542 Sigma-70 region 2 SynA1562_RS06165 PF04539 Sigma-70 region 3 SynA1562_RS06190 PF00005 ABC transporter SynA1562_RS06190 PF03466 LysR substrate binding domain SynA1562_RS06200 PF00155 Aminotransferase class I and II SynA1562_RS06210 PF03167 Uracil DNA glycosylase superfamily SynA1562_RS06215 PF04551 GcpE protein SynA1562_RS06220 PF00595 PDZ domain SynA1562_RS06220 PF03572 Peptidase family S41 SynA1562_RS06230 PF00270 DEAD/DEAH box helicase SynA1562_RS06230 PF02559 CarD-like/TRCF domain SynA1562_RS06230 PF00271 Helicase conserved C-terminal domain SynA1562_RS06230 PF03461 TRCF domain SynA1562_RS06230 PF17757 UvrB interaction domain SynA1562_RS06265 PF03741 Integral membrane protein TerC family SynA1562_RS06280 PF02911 Formyl transferase, C-terminal domain SynA1562_RS06280 PF00551 Formyl transferase SynA1562_RS06290 PF01523 Putative modulator of DNA gyrase SynA1562_RS06295 PF02915 Rubrerythrin SynA1562_RS06310 PF02441 Flavoprotein SynA1562_RS06315 PF17876 Cold shock domain SynA1562_RS06315 PF08206 Ribonuclease B OB domain SynA1562_RS06315 PF00575 S1 RNA binding domain SynA1562_RS06315 PF00773 RNB domain SynA1562_RS06325 PF01169 Uncharacterized protein family UPF0016 SynA1562_RS06335 PF05969 Photosystem II complex subunit Ycf12 SynA1562_RS06340 PF02272 DHHA1 domain SynA1562_RS06340 PF01368 DHH family SynA1562_RS06340 PF17768 RecJ OB domain SynA1562_RS06340 PF10141 Single-strand DNA-specific exonuclease, C terminal domain SynA1562_RS06345 PF13419 Haloacid dehalogenase-like hydrolase SynA1562_RS06360 PF01783 Ribosomal L32p protein family SynA1562_RS06365 PF17862 AAA+ lid domain SynA1562_RS06365 PF00004 ATPase family associated with various cellular activities (AAA) SynA1562_RS06365 PF06480 FtsH Extracellular SynA1562_RS06365 PF01434 Peptidase family M41 SynA1562_RS06370 PF03699 Uncharacterised protein family (UPF0182) SynA1562_RS06375 PF10417 C-terminal domain of 1-Cys peroxiredoxin SynA1562_RS06375 PF00578 AhpC/TSA family SynA1562_RS06390 PF01476 LysM domain SynA1562_RS06390 PF08525 Opacity-associated protein A N-terminal motif SynA1562_RS06390 PF01551 Peptidase family M23 SynA1562_RS06395 PF00588 SpoU rRNA Methylase family SynA1562_RS06400 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase SynA1562_RS06405 PF03040 CemA family SynA1562_RS06430 PF08264 Anticodon-binding domain of tRNA SynA1562_RS06430 PF00133 tRNA synthetases class I (I, L, M and V) SynA1562_RS06430 PF09334 tRNA synthetases class I (M) SynA1562_RS06440 PF00773 RNB domain SynA1562_RS06445 PF01084 Ribosomal protein S18 SynA1562_RS06450 PF00471 Ribosomal protein L33 SynA1562_RS06455 PF03483 B3/4 domain SynA1562_RS06455 PF01588 Putative tRNA binding domain SynA1562_RS06455 PF03484 tRNA synthetase B5 domain SynA1562_RS06455 PF03147 Ferredoxin-fold anticodon binding domain SynA1562_RS06455 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain SynA1562_RS06460 PF13847 Methyltransferase domain SynA1562_RS06465 PF00502 Phycobilisome protein SynA1562_RS06500 PF04545 Sigma-70, region 4 SynA1562_RS06500 PF00140 Sigma-70 factor, region 1.2 SynA1562_RS06500 PF04542 Sigma-70 region 2 SynA1562_RS06500 PF04539 Sigma-70 region 3 SynA1562_RS06510 PF08486 Stage II sporulation protein SynA1562_RS06515 PF00106 short chain dehydrogenase SynA1562_RS06535 PF02965 Vitamin B12 dependent methionine synthase, activation domain SynA1562_RS06535 PF00809 Pterin binding enzyme SynA1562_RS06535 PF02574 Homocysteine S-methyltransferase SynA1562_RS06535 PF02607 B12 binding domain SynA1562_RS06535 PF02310 B12 binding domain SynA1562_RS06540 PF01063 Amino-transferase class IV SynA1562_RS06545 PF02514 CobN/Magnesium Chelatase SynA1562_RS06560 PF03653 Uncharacterised protein family (UPF0093) SynA1562_RS06565 PF04244 Deoxyribodipyrimidine photo-lyase-related protein SynA1562_RS06575 PF08459 UvrC Helix-hairpin-helix N-terminal SynA1562_RS06575 PF02151 UvrB/uvrC motif SynA1562_RS06575 PF12826 Helix-hairpin-helix motif SynA1562_RS06575 PF01541 GIY-YIG catalytic domain SynA1562_RS06585 PF01467 Cytidylyltransferase-like SynA1562_RS06595 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family SynA1562_RS06610 PF00266 Aminotransferase class-V SynA1562_RS06615 PF01678 Diaminopimelate epimerase SynA1562_RS06625 PF13603 Leucyl-tRNA synthetase, Domain 2 SynA1562_RS06625 PF00133 tRNA synthetases class I (I, L, M and V) SynA1562_RS06625 PF08264 Anticodon-binding domain of tRNA SynA1562_RS06625 PF09334 tRNA synthetases class I (M) SynA1562_RS06630 PF00342 Phosphoglucose isomerase SynA1562_RS06665 PF00551 Formyl transferase SynA1562_RS06670 PF01118 Semialdehyde dehydrogenase, NAD binding domain SynA1562_RS06670 PF02774 Semialdehyde dehydrogenase, dimerisation domain SynA1562_RS06675 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase SynA1562_RS06675 PF00925 GTP cyclohydrolase II SynA1562_RS06680 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SynA1562_RS06685 PF01048 Phosphorylase superfamily SynA1562_RS06690 PF13580 SIS domain SynA1562_RS06700 PF00226 DnaJ domain SynA1562_RS06700 PF01556 DnaJ C terminal domain SynA1562_RS06705 PF00012 Hsp70 protein SynA1562_RS06710 PF00528 Binding-protein-dependent transport system inner membrane component SynA1562_RS06715 PF00528 Binding-protein-dependent transport system inner membrane component SynA1562_RS06720 PF00005 ABC transporter SynA1562_RS06730 PF00111 2Fe-2S iron-sulfur cluster binding domain SynA1562_RS06730 PF03473 MOSC domain SynA1562_RS06730 PF03476 MOSC N-terminal beta barrel domain SynA1562_RS06735 PF00459 Inositol monophosphatase family SynA1562_RS06740 PF13393 Histidyl-tRNA synthetase SynA1562_RS06750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SynA1562_RS06750 PF00183 Hsp90 protein SynA1562_RS06755 PF00830 Ribosomal L28 family SynA1562_RS06760 PF00578 AhpC/TSA family SynA1562_RS06765 PF00982 Glycosyltransferase family 20 SynA1562_RS06770 PF01547 Bacterial extracellular solute-binding protein SynA1562_RS06775 PF00528 Binding-protein-dependent transport system inner membrane component SynA1562_RS06780 PF00528 Binding-protein-dependent transport system inner membrane component SynA1562_RS06785 PF00005 ABC transporter SynA1562_RS06785 PF17912 MalK OB fold domain SynA1562_RS06795 PF10693 Protein of unknown function (DUF2499) SynA1562_RS06805 PF01241 Photosystem I psaG / psaK SynA1562_RS06810 PF01494 FAD binding domain SynA1562_RS06815 PF02779 Transketolase, pyrimidine binding domain SynA1562_RS06815 PF02780 Transketolase, C-terminal domain SynA1562_RS06815 PF13292 1-deoxy-D-xylulose-5-phosphate synthase SynA1562_RS06820 PF00585 C-terminal regulatory domain of Threonine dehydratase SynA1562_RS06820 PF00291 Pyridoxal-phosphate dependent enzyme SynA1562_RS06845 PF02887 Pyruvate kinase, alpha/beta domain SynA1562_RS06845 PF00224 Pyruvate kinase, barrel domain SynA1562_RS06845 PF00391 PEP-utilising enzyme, mobile domain SynA1562_RS06850 PF12704 MacB-like periplasmic core domain SynA1562_RS06850 PF00005 ABC transporter SynA1562_RS06850 PF02687 FtsX-like permease family SynA1562_RS06855 PF06480 FtsH Extracellular SynA1562_RS06855 PF17862 AAA+ lid domain SynA1562_RS06855 PF00004 ATPase family associated with various cellular activities (AAA) SynA1562_RS06855 PF01434 Peptidase family M41 SynA1562_RS06865 PF00574 Clp protease SynA1562_RS06870 PF11264 Thylakoid formation protein SynA1562_RS06880 PF03742 PetN SynA1562_RS06885 PF02617 ATP-dependent Clp protease adaptor protein ClpS SynA1562_RS06925 PF02222 ATP-grasp domain SynA1562_RS06925 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain SynA1562_RS06930 PF00528 Binding-protein-dependent transport system inner membrane component SynA1562_RS06935 PF01761 3-dehydroquinate synthase SynA1562_RS06960 PF00149 Calcineurin-like phosphoesterase SynA1562_RS06965 PF02445 Quinolinate synthetase A protein SynA1562_RS06990 PF04675 DNA ligase N terminus SynA1562_RS06990 PF04679 ATP dependent DNA ligase C terminal region SynA1562_RS06990 PF01068 ATP dependent DNA ligase domain SynA1562_RS06995 PF00271 Helicase conserved C-terminal domain SynA1562_RS06995 PF00270 DEAD/DEAH box helicase SynA1562_RS06995 PF08494 DEAD/H associated SynA1562_RS07060 PF01209 ubiE/COQ5 methyltransferase family SynA1562_RS07095 PF00005 ABC transporter SynA1562_RS07110 PF00950 ABC 3 transport family SynA1562_RS07120 PF00005 ABC transporter SynA1562_RS07125 PF01297 Zinc-uptake complex component A periplasmic SynA1562_RS07130 PF00730 HhH-GPD superfamily base excision DNA repair protein SynA1562_RS07130 PF10576 Iron-sulfur binding domain of endonuclease III SynA1562_RS07130 PF00633 Helix-hairpin-helix motif SynA1562_RS07135 PF00111 2Fe-2S iron-sulfur cluster binding domain SynA1562_RS07215 PF00080 Copper/zinc superoxide dismutase (SODC) SynA1562_RS07235 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) SynA1562_RS07245 PF00535 Glycosyl transferase family 2 SynA1562_RS07270 PF02696 Uncharacterized ACR, YdiU/UPF0061 family SynA1562_RS07350 PF00067 Cytochrome P450 SynA1562_RS07375 PF00427 Phycobilisome Linker polypeptide SynA1562_RS07420 PF03641 Possible lysine decarboxylase SynA1562_RS07425 PF13638 PIN domain SynA1562_RS07425 PF02562 PhoH-like protein SynA1562_RS07605 PF07683 Cobalamin synthesis protein cobW C-terminal domain SynA1562_RS07605 PF02492 CobW/HypB/UreG, nucleotide-binding domain SynA1562_RS07635 PF04966 Carbohydrate-selective porin, OprB family SynA1562_RS07635 PF00395 S-layer homology domain SynA1562_RS07645 PF13640 2OG-Fe(II) oxygenase superfamily SynA1562_RS07660 PF00111 2Fe-2S iron-sulfur cluster binding domain SynA1562_RS07670 PF07992 Pyridine nucleotide-disulphide oxidoreductase SynA1562_RS07675 PF00258 Flavodoxin SynA1562_RS07685 PF00471 Ribosomal protein L33 SynA1562_RS07700 PF00421 Photosystem II protein SynA1562_RS07705 PF00395 S-layer homology domain SynA1562_RS07705 PF04966 Carbohydrate-selective porin, OprB family SynA1562_RS07715 PF13442 Cytochrome C oxidase, cbb3-type, subunit III SynA1562_RS07755 PF05378 Hydantoinase/oxoprolinase N-terminal region SynA1562_RS07755 PF01968 Hydantoinase/oxoprolinase SynA1562_RS07760 PF03773 Predicted permease SynA1562_RS07785 PF00005 ABC transporter SynA1562_RS07790 PF00950 ABC 3 transport family SynA1562_RS07835 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase SynA1562_RS07835 PF14572 Phosphoribosyl synthetase-associated domain SynA1562_RS07850 PF01370 NAD dependent epimerase/dehydratase family SynA1562_RS07855 PF02446 4-alpha-glucanotransferase SynA1562_RS07865 PF01479 S4 domain SynA1562_RS07865 PF00849 RNA pseudouridylate synthase SynA1562_RS07870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SynA1562_RS07870 PF00512 His Kinase A (phospho-acceptor) domain SynA1562_RS07870 PF00989 PAS fold SynA1562_RS07875 PF00486 Transcriptional regulatory protein, C terminal SynA1562_RS07875 PF00072 Response regulator receiver domain SynA1562_RS07885 PF03109 ABC1 family SynA1562_RS07890 PF01276 Orn/Lys/Arg decarboxylase, major domain SynA1562_RS07890 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain SynA1562_RS07895 PF05036 Sporulation related domain SynA1562_RS07895 PF03330 Lytic transglycolase SynA1562_RS07910 PF08241 Methyltransferase domain SynA1562_RS07910 PF12697 Alpha/beta hydrolase family SynA1562_RS07915 PF00465 Iron-containing alcohol dehydrogenase SynA1562_RS07920 PF07724 AAA domain (Cdc48 subfamily) SynA1562_RS07920 PF02861 Clp amino terminal domain, pathogenicity island component SynA1562_RS07920 PF10431 C-terminal, D2-small domain, of ClpB protein SynA1562_RS07920 PF00004 ATPase family associated with various cellular activities (AAA) SynA1562_RS07920 PF17871 AAA lid domain SynA1562_RS07930 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain SynA1562_RS07930 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain SynA1562_RS07935 PF02457 DisA bacterial checkpoint controller nucleotide-binding SynA1562_RS07940 PF01255 Putative undecaprenyl diphosphate synthase SynA1562_RS07945 PF06968 Biotin and Thiamin Synthesis associated domain SynA1562_RS07945 PF04055 Radical SAM superfamily SynA1562_RS07955 PF00581 Rhodanese-like domain SynA1562_RS07955 PF17773 UPF0176 acylphosphatase like domain SynA1562_RS07970 PF04055 Radical SAM superfamily SynA1562_RS07975 PF13662 Toprim domain SynA1562_RS07975 PF02132 RecR protein SynA1562_RS07990 PF00582 Universal stress protein family SynA1562_RS07990 PF00999 Sodium/hydrogen exchanger family SynA1562_RS07995 PF00664 ABC transporter transmembrane region SynA1562_RS07995 PF00005 ABC transporter SynA1562_RS08005 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) SynA1562_RS08020 PF03880 DbpA RNA binding domain SynA1562_RS08020 PF00271 Helicase conserved C-terminal domain SynA1562_RS08020 PF00270 DEAD/DEAH box helicase SynA1562_RS08025 PF01050 Mannose-6-phosphate isomerase SynA1562_RS08025 PF00483 Nucleotidyl transferase SynA1562_RS08030 PF13538 UvrD-like helicase C-terminal domain SynA1562_RS08035 PF12705 PD-(D/E)XK nuclease superfamily SynA1562_RS08035 PF13361 UvrD-like helicase C-terminal domain SynA1562_RS08035 PF00580 UvrD/REP helicase N-terminal domain SynA1562_RS08045 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain SynA1562_RS08045 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain SynA1562_RS08045 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain SynA1562_RS08050 PF01370 NAD dependent epimerase/dehydratase family SynA1562_RS08055 PF17946 RecC C-terminal domain SynA1562_RS08060 PF00149 Calcineurin-like phosphoesterase SynA1562_RS08070 PF10674 Protein of unknown function (DUF2488) SynA1562_RS08075 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ SynA1562_RS08090 PF01722 BolA-like protein SynA1562_RS08095 PF00462 Glutaredoxin SynA1562_RS08105 PF00072 Response regulator receiver domain SynA1562_RS08105 PF00486 Transcriptional regulatory protein, C terminal SynA1562_RS08120 PF02397 Bacterial sugar transferase SynA1562_RS08145 PF00535 Glycosyl transferase family 2 SynA1562_RS08150 PF13579 Glycosyl transferase 4-like domain SynA1562_RS08150 PF00534 Glycosyl transferases group 1 SynA1562_RS08160 PF00132 Bacterial transferase hexapeptide (six repeats) SynA1562_RS08160 PF14602 Hexapeptide repeat of succinyl-transferase SynA1562_RS08160 PF12464 Maltose acetyltransferase SynA1562_RS08165 PF13439 Glycosyltransferase Family 4 SynA1562_RS08165 PF00534 Glycosyl transferases group 1 SynA1562_RS08170 PF00534 Glycosyl transferases group 1 SynA1562_RS08170 PF13439 Glycosyltransferase Family 4 SynA1562_RS08175 PF13477 Glycosyl transferase 4-like SynA1562_RS08175 PF00534 Glycosyl transferases group 1 SynA1562_RS08185 PF00005 ABC transporter SynA1562_RS08185 PF00664 ABC transporter transmembrane region SynA1562_RS08195 PF13439 Glycosyltransferase Family 4 SynA1562_RS08195 PF00534 Glycosyl transferases group 1 SynA1562_RS08200 PF02563 Polysaccharide biosynthesis/export protein SynA1562_RS08205 PF13614 AAA domain SynA1562_RS08230 PF01134 Glucose inhibited division protein A SynA1562_RS08235 PF06298 Photosystem II protein Y (PsbY) SynA1562_RS08240 PF00132 Bacterial transferase hexapeptide (six repeats) SynA1562_RS08465 PF03616 Sodium/glutamate symporter SynA1562_RS08470 PF00072 Response regulator receiver domain SynA1562_RS08470 PF00196 Bacterial regulatory proteins, luxR family SynA1562_RS08545 PF00850 Histone deacetylase domain SynA1562_RS08580 PF00149 Calcineurin-like phosphoesterase SynA1562_RS08595 PF01475 Ferric uptake regulator family SynA1562_RS08620 PF09506 Glucosylglycerol-phosphate phosphatase (Salt_tol_Pase) SynA1562_RS08625 PF00355 Rieske [2Fe-2S] domain SynA1562_RS08665 PF01053 Cys/Met metabolism PLP-dependent enzyme SynA1562_RS08670 PF04204 Homoserine O-succinyltransferase SynA1562_RS08700 PF00005 ABC transporter SynA1562_RS08705 PF00528 Binding-protein-dependent transport system inner membrane component SynA1562_RS08710 PF00528 Binding-protein-dependent transport system inner membrane component SynA1562_RS08715 PF00497 Bacterial extracellular solute-binding proteins, family 3 SynA1562_RS08725 PF01740 STAS domain SynA1562_RS08725 PF00916 Sulfate permease family SynA1562_RS08735 PF01903 CbiX SynA1562_RS08745 PF05199 GMC oxidoreductase SynA1562_RS08745 PF00732 GMC oxidoreductase SynA1562_RS08770 PF11780 Protein of unknown function (DUF3318) SynA1562_RS08775 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain SynA1562_RS08775 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SynA1562_RS08775 PF02142 MGS-like domain SynA1562_RS08785 PF01235 Sodium:alanine symporter family SynA1562_RS08795 PF00664 ABC transporter transmembrane region SynA1562_RS08795 PF00005 ABC transporter SynA1562_RS08805 PF00121 Triosephosphate isomerase SynA1562_RS08810 PF00809 Pterin binding enzyme SynA1562_RS08820 PF02514 CobN/Magnesium Chelatase SynA1562_RS08820 PF11965 Domain of unknown function (DUF3479) SynA1562_RS08825 PF01113 Dihydrodipicolinate reductase, N-terminus SynA1562_RS08825 PF05173 Dihydrodipicolinate reductase, C-terminus SynA1562_RS08835 PF00762 Ferrochelatase SynA1562_RS08850 PF00156 Phosphoribosyl transferase domain SynA1562_RS08875 PF00072 Response regulator receiver domain SynA1562_RS08875 PF00486 Transcriptional regulatory protein, C terminal SynA1562_RS08885 PF03976 Polyphosphate kinase 2 (PPK2) SynA1562_RS08910 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain SynA1562_RS08910 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SynA1562_RS08915 PF01022 Bacterial regulatory protein, arsR family SynA1562_RS08925 PF00924 Mechanosensitive ion channel SynA1562_RS08940 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase SynA1562_RS08950 PF17676 LD-carboxypeptidase C-terminal domain SynA1562_RS08950 PF02016 LD-carboxypeptidase N-terminal domain SynA1562_RS08960 PF01116 Fructose-bisphosphate aldolase class-II SynA1562_RS08965 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SynA1562_RS08965 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SynA1562_RS08975 PF17848 Acetyl-coA carboxylase zinc finger domain SynA1562_RS08975 PF01039 Carboxyl transferase domain SynA1562_RS08980 PF06750 Bacterial Peptidase A24 N-terminal domain SynA1562_RS08980 PF01478 Type IV leader peptidase family SynA1562_RS08990 PF00485 Phosphoribulokinase / Uridine kinase family SynA1562_RS08995 PF00180 Isocitrate/isopropylmalate dehydrogenase SynA1562_RS09000 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD SynA1562_RS09000 PF00132 Bacterial transferase hexapeptide (six repeats) SynA1562_RS09005 PF00696 Amino acid kinase family SynA1562_RS09005 PF01472 PUA domain SynA1562_RS09020 PF03652 Holliday junction resolvase SynA1562_RS09040 PF12452 Protein of unknown function (DUF3685) SynA1562_RS09040 PF00072 Response regulator receiver domain SynA1562_RS09050 PF00977 Histidine biosynthesis protein SynA1562_RS09060 PF01066 CDP-alcohol phosphatidyltransferase SynA1562_RS09065 PF00571 CBS domain SynA1562_RS09065 PF00478 IMP dehydrogenase / GMP reductase domain SynA1562_RS09075 PF03734 L,D-transpeptidase catalytic domain SynA1562_RS09075 PF01476 LysM domain SynA1562_RS09095 PF00111 2Fe-2S iron-sulfur cluster binding domain SynA1562_RS09150 PF00520 Ion transport protein SynA1562_RS09150 PF00027 Cyclic nucleotide-binding domain SynA1562_RS09160 PF00462 Glutaredoxin SynA1562_RS09180 PF01593 Flavin containing amine oxidoreductase SynA1562_RS09225 PF01433 Peptidase family M1 domain SynA1562_RS09225 PF17432 Domain of unknown function (DUF3458_C) ARM repeats SynA1562_RS09225 PF11940 Domain of unknown function (DUF3458) Ig-like fold SynA1562_RS09240 PF07689 KaiB domain SynA1562_RS09240 PF00512 His Kinase A (phospho-acceptor) domain SynA1562_RS09240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SynA1562_RS09255 PF00175 Oxidoreductase NAD-binding domain SynA1562_RS09255 PF01383 CpcD/allophycocyanin linker domain SynA1562_RS09260 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain SynA1562_RS09260 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain SynA1562_RS09270 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain SynA1562_RS09270 PF07685 CobB/CobQ-like glutamine amidotransferase domain SynA1562_RS09275 PF00708 Acylphosphatase SynA1562_RS09290 PF13538 UvrD-like helicase C-terminal domain SynA1562_RS09300 PF00348 Polyprenyl synthetase SynA1562_RS09310 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain SynA1562_RS09310 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain SynA1562_RS09315 PF01966 HD domain SynA1562_RS09315 PF07697 7TM-HD extracellular SynA1562_RS09315 PF07698 7TM receptor with intracellular HD hydrolase SynA1562_RS09320 PF04193 PQ loop repeat SynA1562_RS09325 PF00849 RNA pseudouridylate synthase SynA1562_RS09335 PF01910 Thiamine-binding protein SynA1562_RS09365 PF00528 Binding-protein-dependent transport system inner membrane component SynA1562_RS09370 PF00682 HMGL-like SynA1562_RS09370 PF08502 LeuA allosteric (dimerisation) domain SynA1562_RS09375 PF09210 Domain of unknown function (DUF1957) SynA1562_RS09375 PF03065 Glycosyl hydrolase family 57 SynA1562_RS09385 PF03989 DNA gyrase C-terminal domain, beta-propeller SynA1562_RS09385 PF00521 DNA gyrase/topoisomerase IV, subunit A SynA1562_RS09390 PF14159 CAAD domains of cyanobacterial aminoacyl-tRNA synthetase SynA1562_RS09390 PF00749 tRNA synthetases class I (E and Q), catalytic domain SynA1562_RS09395 PF00478 IMP dehydrogenase / GMP reductase domain SynA1562_RS09400 PF00085 Thioredoxin SynA1562_RS09405 PF00117 Glutamine amidotransferase class-I SynA1562_RS09415 PF13442 Cytochrome C oxidase, cbb3-type, subunit III SynA1562_RS09420 PF00588 SpoU rRNA Methylase family SynA1562_RS09435 PF17863 AAA lid domain SynA1562_RS09435 PF01078 Magnesium chelatase, subunit ChlI SynA1562_RS09440 PF02075 Crossover junction endodeoxyribonuclease RuvC SynA1562_RS09445 PF01812 5-formyltetrahydrofolate cyclo-ligase family SynA1562_RS09455 PF02657 Fe-S metabolism associated domain SynA1562_RS09460 PF03447 Homoserine dehydrogenase, NAD binding domain SynA1562_RS09460 PF01842 ACT domain SynA1562_RS09460 PF00742 Homoserine dehydrogenase SynA1562_RS09470 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SynA1562_RS09475 PF00528 Binding-protein-dependent transport system inner membrane component SynA1562_RS09495 PF06071 Protein of unknown function (DUF933) SynA1562_RS09495 PF01926 50S ribosome-binding GTPase SynA1562_RS09500 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SynA1562_RS09505 PF01367 5'-3' exonuclease, C-terminal SAM fold SynA1562_RS09505 PF01612 3'-5' exonuclease SynA1562_RS09505 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain SynA1562_RS09505 PF00476 DNA polymerase family A SynA1562_RS09510 PF01406 tRNA synthetases class I (C) catalytic domain SynA1562_RS09510 PF09190 DALR domain SynA1562_RS09520 PF00209 Sodium:neurotransmitter symporter family SynA1562_RS09525 PF13288 DXP reductoisomerase C-terminal domain SynA1562_RS09525 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase SynA1562_RS09525 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain SynA1562_RS09535 PF00487 Fatty acid desaturase SynA1562_RS09545 PF02233 NAD(P) transhydrogenase beta subunit SynA1562_RS09550 PF01262 Alanine dehydrogenase/PNT, C-terminal domain SynA1562_RS09550 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch SynA1562_RS09550 PF05222 Alanine dehydrogenase/PNT, N-terminal domain SynA1562_RS09555 PF01262 Alanine dehydrogenase/PNT, C-terminal domain SynA1562_RS09555 PF05222 Alanine dehydrogenase/PNT, N-terminal domain SynA1562_RS09580 PF07992 Pyridine nucleotide-disulphide oxidoreductase SynA1562_RS09585 PF01176 Translation initiation factor 1A / IF-1 SynA1562_RS09590 PF00849 RNA pseudouridylate synthase SynA1562_RS09595 PF13847 Methyltransferase domain SynA1562_RS09605 PF13460 NAD(P)H-binding SynA1562_RS09610 PF08041 PetM family of cytochrome b6f complex subunit 7 SynA1562_RS09620 PF12697 Alpha/beta hydrolase family SynA1562_RS09625 PF10369 Small subunit of acetolactate synthase SynA1562_RS09630 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SynA1562_RS09635 PF02392 Ycf4 SynA1562_RS09640 PF00124 Photosynthetic reaction centre protein SynA1562_RS09645 PF00421 Photosystem II protein SynA1562_RS09650 PF01053 Cys/Met metabolism PLP-dependent enzyme SynA1562_RS09655 PF01053 Cys/Met metabolism PLP-dependent enzyme SynA1562_RS09660 PF00291 Pyridoxal-phosphate dependent enzyme SynA1562_RS09665 PF02547 Queuosine biosynthesis protein SynA1562_RS09670 PF02817 e3 binding domain SynA1562_RS09670 PF00364 Biotin-requiring enzyme SynA1562_RS09670 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SynA1562_RS09690 PF02796 Helix-turn-helix domain of resolvase SynA1562_RS09690 PF00239 Resolvase, N terminal domain SynA1562_RS09705 PF00501 AMP-binding enzyme SynA1562_RS09710 PF03099 Biotin/lipoate A/B protein ligase family SynA1562_RS09715 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein SynA1562_RS09715 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus SynA1562_RS09720 PF01791 DeoC/LacD family aldolase SynA1562_RS09725 PF02565 Recombination protein O C terminal SynA1562_RS09725 PF11967 Recombination protein O N terminal SynA1562_RS09735 PF00534 Glycosyl transferases group 1 SynA1562_RS09735 PF13439 Glycosyltransferase Family 4 SynA1562_RS09755 PF03079 ARD/ARD' family SynA1562_RS09760 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SynA1562_RS09765 PF14748 Pyrroline-5-carboxylate reductase dimerisation SynA1562_RS09765 PF03807 NADP oxidoreductase coenzyme F420-dependent SynA1562_RS09770 PF04472 Cell division protein SepF SynA1562_RS09775 PF01168 Alanine racemase, N-terminal domain SynA1562_RS09785 PF02361 Cobalt transport protein SynA1562_RS09790 PF01926 50S ribosome-binding GTPase SynA1562_RS09790 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal SynA1562_RS09795 PF03734 L,D-transpeptidase catalytic domain SynA1562_RS09795 PF17964 Bacterial Ig domain SynA1562_RS09805 PF01207 Dihydrouridine synthase (Dus) SynA1562_RS09810 PF00534 Glycosyl transferases group 1 SynA1562_RS09810 PF00535 Glycosyl transferase family 2 SynA1562_RS09815 PF00483 Nucleotidyl transferase SynA1562_RS09820 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase SynA1562_RS09825 PF04321 RmlD substrate binding domain SynA1562_RS09830 PF16363 GDP-mannose 4,6 dehydratase SynA1562_RS09835 PF14307 Glycosyltransferase WbsX SynA1562_RS09835 PF05045 Rhamnan synthesis protein F SynA1562_RS09860 PF00206 Lyase SynA1562_RS09860 PF10415 Fumarase C C-terminus SynA1562_RS09865 PF08148 DSHCT (NUC185) domain SynA1562_RS09865 PF00271 Helicase conserved C-terminal domain SynA1562_RS09865 PF00270 DEAD/DEAH box helicase SynA1562_RS09890 PF01758 Sodium Bile acid symporter family SynA1562_RS09895 PF00155 Aminotransferase class I and II SynA1562_RS09925 PF00202 Aminotransferase class-III SynA1562_RS09940 PF02527 rRNA small subunit methyltransferase G SynA1562_RS09975 PF04055 Radical SAM superfamily SynA1562_RS09980 PF00762 Ferrochelatase SynA1562_RS09985 PF05000 RNA polymerase Rpb1, domain 4 SynA1562_RS09985 PF04983 RNA polymerase Rpb1, domain 3 SynA1562_RS09985 PF04998 RNA polymerase Rpb1, domain 5 SynA1562_RS09990 PF04997 RNA polymerase Rpb1, domain 1 SynA1562_RS09990 PF04983 RNA polymerase Rpb1, domain 3 SynA1562_RS09990 PF00623 RNA polymerase Rpb1, domain 2 SynA1562_RS09995 PF04563 RNA polymerase beta subunit SynA1562_RS09995 PF04561 RNA polymerase Rpb2, domain 2 SynA1562_RS09995 PF04565 RNA polymerase Rpb2, domain 3 SynA1562_RS09995 PF10385 RNA polymerase beta subunit external 1 domain SynA1562_RS09995 PF00562 RNA polymerase Rpb2, domain 6 SynA1562_RS09995 PF04560 RNA polymerase Rpb2, domain 7 SynA1562_RS10000 PF01026 TatD related DNase SynA1562_RS10005 PF01649 Ribosomal protein S20 SynA1562_RS10010 PF00815 Histidinol dehydrogenase SynA1562_RS10015 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) SynA1562_RS10020 PF13180 PDZ domain SynA1562_RS10040 PF04055 Radical SAM superfamily SynA1562_RS10055 PF02576 RimP N-terminal domain SynA1562_RS10060 PF13184 NusA-like KH domain SynA1562_RS10060 PF08529 NusA N-terminal domain SynA1562_RS10060 PF00575 S1 RNA binding domain SynA1562_RS10070 PF04760 Translation initiation factor IF-2, N-terminal region SynA1562_RS10070 PF00009 Elongation factor Tu GTP binding domain SynA1562_RS10070 PF11987 Translation-initiation factor 2 SynA1562_RS10105 PF02910 Fumarate reductase flavoprotein C-term SynA1562_RS10105 PF00890 FAD binding domain SynA1562_RS10130 PF00749 tRNA synthetases class I (E and Q), catalytic domain SynA1562_RS10135 PF00216 Bacterial DNA-binding protein SynA1562_RS10145 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SynA1562_RS10145 PF00128 Alpha amylase, catalytic domain SynA1562_RS10160 PF02405 Permease MlaE SynA1562_RS10175 PF02660 Glycerol-3-phosphate acyltransferase SynA1562_RS10180 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family SynA1562_RS10190 PF00579 tRNA synthetases class I (W and Y) SynA1562_RS10200 PF00196 Bacterial regulatory proteins, luxR family SynA1562_RS10200 PF00072 Response regulator receiver domain SynA1562_RS10220 PF02789 Cytosol aminopeptidase family, N-terminal domain SynA1562_RS10220 PF00883 Cytosol aminopeptidase family, catalytic domain SynA1562_RS10255 PF01625 Peptide methionine sulfoxide reductase SynA1562_RS10260 PF02684 Lipid-A-disaccharide synthetase SynA1562_RS10265 PF00132 Bacterial transferase hexapeptide (six repeats) SynA1562_RS10265 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 SynA1562_RS10270 PF07977 FabA-like domain SynA1562_RS10275 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase SynA1562_RS10285 PF01259 SAICAR synthetase SynA1562_RS10295 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain SynA1562_RS10295 PF02843 Phosphoribosylglycinamide synthetase, C domain SynA1562_RS10295 PF02844 Phosphoribosylglycinamide synthetase, N domain SynA1562_RS10300 PF00672 HAMP domain SynA1562_RS10300 PF00989 PAS fold SynA1562_RS10300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SynA1562_RS10300 PF00512 His Kinase A (phospho-acceptor) domain SynA1562_RS10305 PF06745 KaiC SynA1562_RS10310 PF07689 KaiB domain SynA1562_RS10315 PF07688 KaiA C-terminal domain SynA1562_RS10320 PF00829 Ribosomal prokaryotic L21 protein SynA1562_RS10325 PF01016 Ribosomal L27 protein SynA1562_RS10335 PF16198 tRNA pseudouridylate synthase B C-terminal domain SynA1562_RS10335 PF01509 TruB family pseudouridylate synthase (N terminal domain) SynA1562_RS10340 PF01709 Transcriptional regulator SynA1562_RS10355 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase SynA1562_RS10360 PF04122 Putative cell wall binding repeat 2 SynA1562_RS10360 PF08486 Stage II sporulation protein SynA1562_RS10365 PF12706 Beta-lactamase superfamily domain SynA1562_RS10370 PF14495 Cytochrome c-550 domain SynA1562_RS10380 PF00111 2Fe-2S iron-sulfur cluster binding domain SynA1562_RS10390 PF01842 ACT domain SynA1562_RS10390 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SynA1562_RS10390 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SynA1562_RS10410 PF08245 Mur ligase middle domain SynA1562_RS10410 PF02875 Mur ligase family, glutamate ligase domain SynA1562_RS10435 PF01192 RNA polymerase Rpb6 SynA1562_RS10445 PF00012 Hsp70 protein SynA1562_RS10460 PF00156 Phosphoribosyl transferase domain SynA1562_RS10465 PF06415 BPG-independent PGAM N-terminus (iPGM_N) SynA1562_RS10465 PF01676 Metalloenzyme superfamily SynA1562_RS10490 PF00118 TCP-1/cpn60 chaperonin family SynA1562_RS10495 PF00166 Chaperonin 10 Kd subunit SynA1562_RS10500 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SynA1562_RS10500 PF02874 ATP synthase alpha/beta family, beta-barrel domain SynA1562_RS10505 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain SynA1562_RS10505 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain SynA1562_RS10510 PF04839 Plastid and cyanobacterial ribosomal protein (PSRP-3 / Ycf65) SynA1562_RS10520 PF01699 Sodium/calcium exchanger protein SynA1562_RS10525 PF00557 Metallopeptidase family M24 SynA1562_RS10525 PF05195 Aminopeptidase P, N-terminal domain SynA1562_RS10530 PF00571 CBS domain SynA1562_RS10530 PF01595 Cyclin M transmembrane N-terminal domain SynA1562_RS10535 PF12631 MnmE helical domain SynA1562_RS10535 PF01926 50S ribosome-binding GTPase SynA1562_RS10535 PF10396 GTP-binding protein TrmE N-terminus SynA1562_RS10540 PF01467 Cytidylyltransferase-like SynA1562_RS10545 PF02540 NAD synthase SynA1562_RS10545 PF00795 Carbon-nitrogen hydrolase SynA1562_RS10550 PF01262 Alanine dehydrogenase/PNT, C-terminal domain SynA1562_RS10550 PF05222 Alanine dehydrogenase/PNT, N-terminal domain SynA1562_RS10555 PF02810 SEC-C motif SynA1562_RS10560 PF11805 Protein of unknown function (DUF3326) SynA1562_RS10570 PF00111 2Fe-2S iron-sulfur cluster binding domain SynA1562_RS10580 PF00231 ATP synthase SynA1562_RS10585 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SynA1562_RS10585 PF00306 ATP synthase alpha/beta chain, C terminal domain SynA1562_RS10585 PF02874 ATP synthase alpha/beta family, beta-barrel domain SynA1562_RS10590 PF00213 ATP synthase delta (OSCP) subunit SynA1562_RS10595 PF00430 ATP synthase B/B' CF(0) SynA1562_RS10600 PF00430 ATP synthase B/B' CF(0) SynA1562_RS10605 PF00137 ATP synthase subunit C SynA1562_RS10610 PF00119 ATP synthase A chain SynA1562_RS10620 PF13847 Methyltransferase domain SynA1562_RS10625 PF00427 Phycobilisome Linker polypeptide SynA1562_RS10625 PF00502 Phycobilisome protein SynA1562_RS10630 PF00502 Phycobilisome protein SynA1562_RS10635 PF00502 Phycobilisome protein SynA1562_RS10640 PF01383 CpcD/allophycocyanin linker domain SynA1562_RS10645 PF01728 FtsJ-like methyltransferase SynA1562_RS10645 PF01479 S4 domain SynA1562_RS10655 PF01098 Cell cycle protein SynA1562_RS10665 PF05140 ResB-like family SynA1562_RS10670 PF14489 QueF-like protein SynA1562_RS10675 PF00543 Nitrogen regulatory protein P-II SynA1562_RS10685 PF10397 Adenylosuccinate lyase C-terminus SynA1562_RS10685 PF00206 Lyase SynA1562_RS10700 PF00550 Phosphopantetheine attachment site SynA1562_RS10705 PF02801 Beta-ketoacyl synthase, C-terminal domain SynA1562_RS10705 PF00109 Beta-ketoacyl synthase, N-terminal domain SynA1562_RS10715 PF05159 Capsule polysaccharide biosynthesis protein SynA1562_RS10720 PF05159 Capsule polysaccharide biosynthesis protein SynA1562_RS10725 PF02348 Cytidylyltransferase SynA1562_RS10745 PF03102 NeuB family SynA1562_RS10745 PF08666 SAF domain SynA1562_RS10795 PF01661 Macro domain SynA1562_RS10815 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SynA1562_RS10845 PF00589 Phage integrase family SynA1562_RS10845 PF02899 Phage integrase, N-terminal SAM-like domain SynA1562_RS10855 PF02926 THUMP domain SynA1562_RS10855 PF01170 Putative RNA methylase family UPF0020 SynA1562_RS10880 PF02463 RecF/RecN/SMC N terminal domain SynA1562_RS10880 PF06470 SMC proteins Flexible Hinge Domain SynA1562_RS10890 PF01641 SelR domain SynA1562_RS10895 PF02684 Lipid-A-disaccharide synthetase SynA1562_RS10905 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SynA1562_RS10905 PF02785 Biotin carboxylase C-terminal domain SynA1562_RS10905 PF00289 Biotin carboxylase, N-terminal domain SynA1562_RS10915 PF06596 Photosystem II reaction centre X protein (PsbX) SynA1562_RS10920 PF07444 Ycf66 protein N-terminus SynA1562_RS10935 PF00762 Ferrochelatase SynA1562_RS10940 PF00005 ABC transporter SynA1562_RS10940 PF06472 ABC transporter transmembrane region 2 SynA1562_RS10945 PF01230 HIT domain SynA1562_RS10955 PF01078 Magnesium chelatase, subunit ChlI SynA1562_RS10955 PF13335 Magnesium chelatase, subunit ChlI C-terminal SynA1562_RS10975 PF01327 Polypeptide deformylase SynA1562_RS10985 PF01741 Large-conductance mechanosensitive channel, MscL SynA1562_RS10995 PF00266 Aminotransferase class-V SynA1562_RS11000 PF01458 Uncharacterized protein family (UPF0051) SynA1562_RS11005 PF00005 ABC transporter SynA1562_RS11010 PF01458 Uncharacterized protein family (UPF0051) SynA1562_RS11015 PF02943 Ferredoxin thioredoxin reductase catalytic beta chain SynA1562_RS11030 PF09367 CpeS-like protein SynA1562_RS11035 PF00427 Phycobilisome Linker polypeptide SynA1562_RS11065 PF13847 Methyltransferase domain SynA1562_RS11085 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SynA1562_RS11085 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SynA1562_RS11085 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SynA1562_RS11085 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SynA1562_RS11110 PF00873 AcrB/AcrD/AcrF family SynA1562_RS11120 PF05496 Holliday junction DNA helicase RuvB P-loop domain SynA1562_RS11120 PF16193 AAA C-terminal domain SynA1562_RS11120 PF12002 MgsA AAA+ ATPase C terminal SynA1562_RS11135 PF00578 AhpC/TSA family SynA1562_RS11140 PF03309 Type III pantothenate kinase SynA1562_RS11145 PF01507 Phosphoadenosine phosphosulfate reductase family SynA1562_RS11150 PF07992 Pyridine nucleotide-disulphide oxidoreductase SynA1562_RS11155 PF01926 50S ribosome-binding GTPase SynA1562_RS11155 PF16360 GTP-binding GTPase Middle Region SynA1562_RS11155 PF13167 GTP-binding GTPase N-terminal SynA1562_RS11160 PF02080 TrkA-C domain SynA1562_RS11160 PF03600 Citrate transporter SynA1562_RS11165 PF02386 Cation transport protein SynA1562_RS11170 PF02080 TrkA-C domain SynA1562_RS11170 PF02254 TrkA-N domain SynA1562_RS11175 PF03702 Anhydro-N-acetylmuramic acid kinase SynA1562_RS11200 PF12848 ABC transporter SynA1562_RS11200 PF16326 ABC transporter C-terminal domain SynA1562_RS11200 PF00005 ABC transporter SynA1562_RS11210 PF13180 PDZ domain SynA1562_RS11225 PF00271 Helicase conserved C-terminal domain SynA1562_RS11225 PF00270 DEAD/DEAH box helicase SynA1562_RS11225 PF08482 ATP-dependent helicase C-terminal SynA1562_RS11225 PF04408 Helicase associated domain (HA2) SynA1562_RS11240 PF02601 Exonuclease VII, large subunit SynA1562_RS11240 PF13742 OB-fold nucleic acid binding domain SynA1562_RS11290 PF00459 Inositol monophosphatase family SynA1562_RS11305 PF02673 Bacitracin resistance protein BacA SynA1562_RS11315 PF06514 Photosystem II 12 kDa extrinsic protein (PsbU) SynA1562_RS11320 PF02910 Fumarate reductase flavoprotein C-term SynA1562_RS11320 PF00890 FAD binding domain SynA1562_RS11325 PF07884 Vitamin K epoxide reductase family SynA1562_RS11330 PF00919 Uncharacterized protein family UPF0004 SynA1562_RS11330 PF18693 TRAM domain SynA1562_RS11330 PF04055 Radical SAM superfamily SynA1562_RS11335 PF07690 Major Facilitator Superfamily SynA1562_RS11340 PF07690 Major Facilitator Superfamily SynA1562_RS11350 PF04055 Radical SAM superfamily SynA1562_RS11350 PF13282 Domain of unknown function (DUF4070) SynA1562_RS11350 PF02310 B12 binding domain SynA1562_RS11355 PF14251 Domain of unknown function (DUF4346) SynA1562_RS11375 PF01202 Shikimate kinase SynA1562_RS11400 PF02033 Ribosome-binding factor A SynA1562_RS11405 PF00933 Glycosyl hydrolase family 3 N terminal domain SynA1562_RS11410 PF00535 Glycosyl transferase family 2 SynA1562_RS11410 PF13181 Tetratricopeptide repeat SynA1562_RS11415 PF02602 Uroporphyrinogen-III synthase HemD SynA1562_RS11430 PF01593 Flavin containing amine oxidoreductase SynA1562_RS11435 PF01521 Iron-sulphur cluster biosynthesis SynA1562_RS11460 PF08338 Domain of unknown function (DUF1731) SynA1562_RS11460 PF01370 NAD dependent epimerase/dehydratase family SynA1562_RS11465 PF11910 Cyanobacterial and plant NDH-1 subunit O SynA1562_RS11475 PF00684 DnaJ central domain SynA1562_RS11475 PF01556 DnaJ C terminal domain SynA1562_RS11475 PF00226 DnaJ domain SynA1562_RS11480 PF00291 Pyridoxal-phosphate dependent enzyme SynA1562_RS11485 PF04966 Carbohydrate-selective porin, OprB family SynA1562_RS11485 PF00395 S-layer homology domain SynA1562_RS11490 PF04966 Carbohydrate-selective porin, OprB family SynA1562_RS11490 PF00395 S-layer homology domain SynA1562_RS11505 PF00535 Glycosyl transferase family 2 SynA1562_RS11535 PF00124 Photosynthetic reaction centre protein SynA1562_RS11545 PF00005 ABC transporter SynA1562_RS11555 PF00486 Transcriptional regulatory protein, C terminal SynA1562_RS11555 PF00072 Response regulator receiver domain SynA1562_RS11560 PF09115 DNA polymerase III, delta subunit, C terminal SynA1562_RS11565 PF02223 Thymidylate kinase SynA1562_RS11570 PF00403 Heavy-metal-associated domain SynA1562_RS11580 PF18073 Rubredoxin metal binding domain SynA1562_RS11580 PF06745 KaiC SynA1562_RS11585 PF00486 Transcriptional regulatory protein, C terminal SynA1562_RS11585 PF00072 Response regulator receiver domain SynA1562_RS11590 PF02504 Fatty acid synthesis protein SynA1562_RS11595 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal SynA1562_RS11595 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III SynA1562_RS11600 PF00698 Acyl transferase domain SynA1562_RS11605 PF01553 Acyltransferase SynA1562_RS11605 PF00501 AMP-binding enzyme SynA1562_RS11605 PF13193 AMP-binding enzyme C-terminal domain SynA1562_RS11615 PF00814 Glycoprotease family SynA1562_RS11625 PF01743 Poly A polymerase head domain SynA1562_RS11630 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) SynA1562_RS11640 PF01593 Flavin containing amine oxidoreductase SynA1562_RS11645 PF10664 Cyanobacterial and plastid NDH-1 subunit M SynA1562_RS11655 PF03466 LysR substrate binding domain SynA1562_RS11655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SynA1562_RS11665 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus SynA1562_RS11665 PF00361 Proton-conducting membrane transporter SynA1562_RS11665 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus SynA1562_RS11670 PF00361 Proton-conducting membrane transporter SynA1562_RS11685 PF00483 Nucleotidyl transferase SynA1562_RS11695 PF00196 Bacterial regulatory proteins, luxR family SynA1562_RS11695 PF00072 Response regulator receiver domain SynA1562_RS11705 PF01513 ATP-NAD kinase SynA1562_RS11710 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L SynA1562_RS11715 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 SynA1562_RS11720 PF13237 4Fe-4S dicluster domain SynA1562_RS11725 PF00146 NADH dehydrogenase SynA1562_RS11730 PF00285 Citrate synthase, C-terminal domain SynA1562_RS11745 PF00581 Rhodanese-like domain SynA1562_RS11745 PF17773 UPF0176 acylphosphatase like domain SynA1562_RS11755 PF00291 Pyridoxal-phosphate dependent enzyme SynA1562_RS11760 PF01253 Translation initiation factor SUI1 SynA1562_RS11770 PF01594 AI-2E family transporter SynA1562_RS11780 PF00731 AIR carboxylase SynA1562_RS11790 PF07109 Magnesium-protoporphyrin IX methyltransferase C-terminus SynA1562_RS11795 PF00849 RNA pseudouridylate synthase SynA1562_RS11800 PF00072 Response regulator receiver domain SynA1562_RS11800 PF00486 Transcriptional regulatory protein, C terminal SynA1562_RS11810 PF00266 Aminotransferase class-V SynA1562_RS11825 PF01795 MraW methylase family SynA1562_RS11830 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit SynA1562_RS11850 PF00501 AMP-binding enzyme SynA1562_RS11850 PF13193 AMP-binding enzyme C-terminal domain SynA1562_RS11855 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain SynA1562_RS11855 PF13378 Enolase C-terminal domain-like SynA1562_RS11860 PF01040 UbiA prenyltransferase family SynA1562_RS11865 PF00425 chorismate binding enzyme SynA1562_RS11870 PF02951 Prokaryotic glutathione synthetase, N-terminal domain SynA1562_RS11870 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain SynA1562_RS11875 PF00462 Glutaredoxin SynA1562_RS11890 PF02130 Uncharacterized protein family UPF0054 SynA1562_RS11895 PF01219 Prokaryotic diacylglycerol kinase SynA1562_RS11900 PF00117 Glutamine amidotransferase class-I SynA1562_RS11915 PF00710 Asparaginase, N-terminal SynA1562_RS11915 PF17763 Glutaminase/Asparaginase C-terminal domain SynA1562_RS11920 PF00155 Aminotransferase class I and II SynA1562_RS11925 PF00750 tRNA synthetases class I (R) SynA1562_RS11925 PF03485 Arginyl tRNA synthetase N terminal domain SynA1562_RS11925 PF05746 DALR anticodon binding domain SynA1562_RS11930 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain SynA1562_RS11930 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain SynA1562_RS11935 PF01926 50S ribosome-binding GTPase SynA1562_RS11935 PF12631 MnmE helical domain SynA1562_RS11935 PF10396 GTP-binding protein TrmE N-terminus SynA1562_RS11945 PF02824 TGS domain SynA1562_RS11945 PF13291 ACT domain SynA1562_RS11945 PF04607 Region found in RelA / SpoT proteins SynA1562_RS11950 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SynA1562_RS11950 PF00005 ABC transporter SynA1562_RS11955 PF01479 S4 domain SynA1562_RS11955 PF00849 RNA pseudouridylate synthase SynA1562_RS11960 PF01926 50S ribosome-binding GTPase SynA1562_RS11965 PF00162 Phosphoglycerate kinase SynA1562_RS11975 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase SynA1562_RS11975 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SynA1562_RS11985 PF04101 Glycosyltransferase family 28 C-terminal domain SynA1562_RS11985 PF03033 Glycosyltransferase family 28 N-terminal domain SynA1562_RS11990 PF00155 Aminotransferase class I and II SynA1562_RS12000 PF01180 Dihydroorotate dehydrogenase SynA1562_RS12005 PF00075 RNase H SynA1562_RS12015 PF16320 Ribosomal protein L7/L12 dimerisation domain SynA1562_RS12015 PF00542 Ribosomal protein L7/L12 C-terminal domain SynA1562_RS12020 PF00466 Ribosomal protein L10 SynA1562_RS12025 PF00687 Ribosomal protein L1p/L10e family SynA1562_RS12030 PF00298 Ribosomal protein L11, RNA binding domain SynA1562_RS12030 PF03946 Ribosomal protein L11, N-terminal domain SynA1562_RS12035 PF00467 KOW motif SynA1562_RS12035 PF02357 Transcription termination factor nusG SynA1562_RS12040 PF00584 SecE/Sec61-gamma subunits of protein translocation complex SynA1562_RS12045 PF07724 AAA domain (Cdc48 subfamily) SynA1562_RS12045 PF17871 AAA lid domain SynA1562_RS12045 PF02861 Clp amino terminal domain, pathogenicity island component SynA1562_RS12045 PF10431 C-terminal, D2-small domain, of ClpB protein SynA1562_RS12045 PF00004 ATPase family associated with various cellular activities (AAA) SynA1562_RS12050 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SynA1562_RS12055 PF03952 Enolase, N-terminal domain SynA1562_RS12055 PF00113 Enolase, C-terminal TIM barrel domain SynA1562_RS12060 PF03109 ABC1 family SynA1562_RS12085 PF00239 Resolvase, N terminal domain SynA1562_RS12085 PF02796 Helix-turn-helix domain of resolvase SynA1562_RS12110 PF01960 ArgJ family SynA1562_RS12115 PF01121 Dephospho-CoA kinase SynA1562_RS12125 PF02934 GatB/GatE catalytic domain SynA1562_RS12125 PF02637 GatB domain SynA1562_RS12130 PF05690 Thiazole biosynthesis protein ThiG SynA1562_RS12130 PF01266 FAD dependent oxidoreductase SynA1562_RS12135 PF00334 Nucleoside diphosphate kinase SynA1562_RS12140 PF17810 Arginine decarboxylase helical bundle domain SynA1562_RS12140 PF17944 Arginine decarboxylase C-terminal helical extension SynA1562_RS12140 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain SynA1562_RS12155 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SynA1562_RS12155 PF02272 DHHA1 domain SynA1562_RS12155 PF01411 tRNA synthetases class II (A) SynA1562_RS12165 PF00176 SNF2 family N-terminal domain SynA1562_RS12165 PF12419 SNF2 Helicase protein SynA1562_RS12165 PF00271 Helicase conserved C-terminal domain SynA1562_RS12180 PF00011 Hsp20/alpha crystallin family SynA1562_RS12190 PF01613 Flavin reductase like domain SynA1562_RS12190 PF00753 Metallo-beta-lactamase superfamily SynA1562_RS12200 PF00258 Flavodoxin SynA1562_RS12200 PF01613 Flavin reductase like domain SynA1562_RS12205 PF00301 Rubredoxin SynA1562_RS12220 PF02347 Glycine cleavage system P-protein SynA1562_RS12225 PF01597 Glycine cleavage H-protein SynA1562_RS12230 PF06838 Methionine gamma-lyase SynA1562_RS12240 PF03948 Ribosomal protein L9, C-terminal domain SynA1562_RS12240 PF01281 Ribosomal protein L9, N-terminal domain SynA1562_RS12245 PF14528 LAGLIDADG-like domain SynA1562_RS12245 PF03796 DnaB-like helicase C terminal domain SynA1562_RS12245 PF00772 DnaB-like helicase N terminal domain SynA1562_RS12245 PF14528 LAGLIDADG-like domain SynA1562_RS12245 PF03796 DnaB-like helicase C terminal domain SynA1562_RS12245 PF00772 DnaB-like helicase N terminal domain SynA1562_RS12260 PF01134 Glucose inhibited division protein A SynA1562_RS12260 PF13932 GidA associated domain SynA1562_RS12295 PF00533 BRCA1 C Terminus (BRCT) domain SynA1562_RS12295 PF01653 NAD-dependent DNA ligase adenylation domain SynA1562_RS12295 PF03120 NAD-dependent DNA ligase OB-fold domain SynA1562_RS12295 PF03119 NAD-dependent DNA ligase C4 zinc finger domain SynA1562_RS12295 PF12826 Helix-hairpin-helix motif SynA1562_RS12305 PF09335 SNARE associated Golgi protein SynA1562_RS12320 PF00005 ABC transporter SynA1562_RS12325 PF00924 Mechanosensitive ion channel SynA1562_RS12330 PF10458 Valyl tRNA synthetase tRNA binding arm SynA1562_RS12330 PF08264 Anticodon-binding domain of tRNA SynA1562_RS12330 PF00133 tRNA synthetases class I (I, L, M and V) SynA1562_RS12360 PF00106 short chain dehydrogenase SynA1562_RS12405 PF03819 MazG nucleotide pyrophosphohydrolase domain SynA1562_RS12410 PF00472 RF-1 domain SynA1562_RS12410 PF03462 PCRF domain SynA1562_RS12415 PF17284 Spermidine synthase tetramerisation domain SynA1562_RS12420 PF00491 Arginase family SynA1562_RS12435 PF01571 Aminomethyltransferase folate-binding domain SynA1562_RS12435 PF08669 Glycine cleavage T-protein C-terminal barrel domain SynA1562_RS12440 PF02938 GAD domain SynA1562_RS12440 PF00152 tRNA synthetases class II (D, K and N) SynA1562_RS12440 PF01336 OB-fold nucleic acid binding domain SynA1562_RS12445 PF04545 Sigma-70, region 4 SynA1562_RS12445 PF04542 Sigma-70 region 2 SynA1562_RS12445 PF04539 Sigma-70 region 3 SynA1562_RS12445 PF00140 Sigma-70 factor, region 1.2 SynA1562_RS12455 PF00117 Glutamine amidotransferase class-I SynA1562_RS12455 PF06418 CTP synthase N-terminus SynA1562_RS12460 PF04055 Radical SAM superfamily SynA1562_RS12465 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SynA1562_RS12465 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase SynA1562_RS12470 PF06508 Queuosine biosynthesis protein QueC SynA1562_RS12475 PF04715 Anthranilate synthase component I, N terminal region SynA1562_RS12475 PF00425 chorismate binding enzyme SynA1562_RS12490 PF00128 Alpha amylase, catalytic domain SynA1562_RS12495 PF00535 Glycosyl transferase family 2 SynA1562_RS12510 PF00005 ABC transporter SynA1562_RS12515 PF00005 ABC transporter SynA1562_RS12515 PF12399 Branched-chain amino acid ATP-binding cassette transporter SynA1562_RS12525 PF02653 Branched-chain amino acid transport system / permease component SynA1562_RS12530 PF13458 Periplasmic binding protein SynA1562_RS12535 PF02492 CobW/HypB/UreG, nucleotide-binding domain SynA1562_RS12540 PF01730 UreF SynA1562_RS12545 PF02814 UreE urease accessory protein, N-terminal domain SynA1562_RS12545 PF05194 UreE urease accessory protein, C-terminal domain SynA1562_RS12550 PF01774 UreD urease accessory protein SynA1562_RS12555 PF00547 Urease, gamma subunit SynA1562_RS12560 PF00699 Urease beta subunit SynA1562_RS12565 PF01979 Amidohydrolase family SynA1562_RS12565 PF00449 Urease alpha-subunit, N-terminal domain SynA1562_RS12570 PF00117 Glutamine amidotransferase class-I SynA1562_RS12590 PF01546 Peptidase family M20/M25/M40 SynA1562_RS12595 PF00733 Asparagine synthase SynA1562_RS12595 PF13537 Glutamine amidotransferase domain SynA1562_RS12600 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SynA1562_RS12600 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SynA1562_RS12610 PF00474 Sodium:solute symporter family SynA1562_RS12615 PF14403 Circularly permuted ATP-grasp type 2 SynA1562_RS12635 PF06463 Molybdenum Cofactor Synthesis C SynA1562_RS12635 PF04055 Radical SAM superfamily SynA1562_RS12640 PF12804 MobA-like NTP transferase domain SynA1562_RS12645 PF07690 Major Facilitator Superfamily SynA1562_RS12650 PF01568 Molydopterin dinucleotide binding domain SynA1562_RS12650 PF00384 Molybdopterin oxidoreductase SynA1562_RS12650 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SynA1562_RS12665 PF00484 Carbonic anhydrase SynA1562_RS12670 PF01967 MoaC family SynA1562_RS12675 PF03453 MoeA N-terminal region (domain I and II) SynA1562_RS12675 PF03454 MoeA C-terminal region (domain IV) SynA1562_RS12675 PF00994 Probable molybdopterin binding domain SynA1562_RS12690 PF02391 MoaE protein SynA1562_RS12700 PF00994 Probable molybdopterin binding domain SynA1562_RS12705 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SynA1562_RS12720 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain SynA1562_RS12720 PF01077 Nitrite and sulphite reductase 4Fe-4S domain SynA1562_RS12730 PF01226 Formate/nitrite transporter SynA1562_RS12740 PF02560 Cyanate lyase C-terminal domain SynA1562_RS12750 PF02885 Glycosyl transferase family, helical bundle domain SynA1562_RS12750 PF00591 Glycosyl transferase family, a/b domain SynA1562_RS12760 PF07690 Major Facilitator Superfamily SynA1562_RS12765 PF13090 Polyphosphate kinase C-terminal domain 2 SynA1562_RS12765 PF02503 Polyphosphate kinase middle domain SynA1562_RS12765 PF13089 Polyphosphate kinase N-terminal domain SynA1562_RS12765 PF17941 Polyphosphate kinase C-terminal domain 1 SynA1562_RS12770 PF04542 Sigma-70 region 2 SynA1562_RS12770 PF04545 Sigma-70, region 4 SynA1562_RS12770 PF04539 Sigma-70 region 3 SynA1562_RS12770 PF00140 Sigma-70 factor, region 1.2 SynA1562_RS12780 PF00793 DAHP synthetase I family SynA1562_RS12785 PF11791 Aconitate B N-terminal domain SynA1562_RS12785 PF06434 Aconitate hydratase 2 N-terminus SynA1562_RS12785 PF00330 Aconitase family (aconitate hydratase) SynA1562_RS12790 PF00654 Voltage gated chloride channel SynA1562_RS12795 PF04055 Radical SAM superfamily SynA1562_RS12795 PF01938 TRAM domain SynA1562_RS12795 PF00919 Uncharacterized protein family UPF0004 SynA1562_RS12805 PF00551 Formyl transferase SynA1562_RS12805 PF01842 ACT domain SynA1562_RS12815 PF01266 FAD dependent oxidoreductase SynA1562_RS12825 PF00012 Hsp70 protein SynA1562_RS12830 PF08501 Shikimate dehydrogenase substrate binding domain SynA1562_RS12830 PF01488 Shikimate / quinate 5-dehydrogenase SynA1562_RS12830 PF18317 Shikimate 5'-dehydrogenase C-terminal domain SynA1562_RS12840 PF01250 Ribosomal protein S6 SynA1562_RS12850 PF00764 Arginosuccinate synthase SynA1562_RS12860 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 SynA1562_RS12860 PF00953 Glycosyl transferase family 4 SynA1562_RS12885 PF03734 L,D-transpeptidase catalytic domain SynA1562_RS12885 PF01476 LysM domain SynA1562_RS12890 PF02222 ATP-grasp domain SynA1562_RS12895 PF00534 Glycosyl transferases group 1 SynA1562_RS12895 PF00862 Sucrose synthase SynA1562_RS12905 PF17760 UvrA interaction domain SynA1562_RS12905 PF17755 UvrA DNA-binding domain SynA1562_RS12910 PF02463 RecF/RecN/SMC N terminal domain SynA1562_RS12915 PF03109 ABC1 family SynA1562_RS12925 PF00291 Pyridoxal-phosphate dependent enzyme