CYB_RS00005 SM00382 ATPases associated with a variety of cellular activities CYB_RS00005 SM00760 Bacterial dnaA protein helix-turn-helix domain CYB_RS00020 SM00382 ATPases associated with a variety of cellular activities CYB_RS00025 SM00822 CYB_RS00025 CYB_RS00035 SM00434 DNA Topoisomerase IV CYB_RS00045 SM00382 ATPases associated with a variety of cellular activities CYB_RS00050 SM00062 Bacterial periplasmic substrate-binding proteins CYB_RS00105 SM00382 ATPases associated with a variety of cellular activities CYB_RS00120 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CYB_RS00120 SM00091 PAS domain CYB_RS00120 SM00387 Histidine kinase-like ATPases CYB_RS00120 SM00388 His Kinase A (phosphoacceptor) domain CYB_RS00160 SM00382 ATPases associated with a variety of cellular activities CYB_RS00165 SM00382 ATPases associated with a variety of cellular activities CYB_RS00175 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CYB_RS00190 SM01209 CYB_RS00190 CYB_RS00190 SM01210 CYB_RS00190 CYB_RS00200 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CYB_RS00210 SM00849 Metallo-beta-lactamase superfamily CYB_RS00215 SM01130 CYB_RS00215 CYB_RS00255 SM00072 Guanylate kinase homologues. CYB_RS00290 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CYB_RS00295 SM00838 Elongation factor G C-terminus CYB_RS00365 SM00788 Adenylosuccinate synthetase CYB_RS00370 SM00245 tail specific protease CYB_RS00455 SM00855 Phosphoglycerate mutase family CYB_RS00465 SM00271 DnaJ molecular chaperone homology domain CYB_RS00505 SM00382 ATPases associated with a variety of cellular activities CYB_RS00515 SM00318 Staphylococcal nuclease homologues CYB_RS00595 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CYB_RS00595 SM00474 3'-5' exonuclease CYB_RS00595 SM00475 5'-3' exonuclease CYB_RS00595 SM00482 DNA polymerase A domain CYB_RS00690 SM00382 ATPases associated with a variety of cellular activities CYB_RS00700 SM00235 Zinc-dependent metalloprotease CYB_RS00710 SM00271 DnaJ molecular chaperone homology domain CYB_RS00720 SM00849 Metallo-beta-lactamase superfamily CYB_RS00755 SM00382 ATPases associated with a variety of cellular activities CYB_RS00790 SM00382 ATPases associated with a variety of cellular activities CYB_RS00795 SM00382 ATPases associated with a variety of cellular activities CYB_RS00810 SM01094 CpcD/allophycocyanin linker domain CYB_RS00825 SM00448 cheY-homologous receiver domain CYB_RS00825 SM00862 Transcriptional regulatory protein, C terminal CYB_RS00845 SM00028 Tetratricopeptide repeats CYB_RS00860 SM00382 ATPases associated with a variety of cellular activities CYB_RS00875 SM01387 CYB_RS00875 CYB_RS00880 SM00567 E-Z type HEAT repeats CYB_RS00890 SM00382 ATPases associated with a variety of cellular activities CYB_RS00900 SM00822 CYB_RS00900 CYB_RS00905 SM00382 ATPases associated with a variety of cellular activities CYB_RS00935 SM00363 S4 RNA-binding domain CYB_RS00985 SM00852 Probable molybdopterin binding domain CYB_RS01030 SM00851 MGS-like domain CYB_RS01030 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CYB_RS01135 SM00382 ATPases associated with a variety of cellular activities CYB_RS01145 SM00881 CoA binding domain CYB_RS01185 SM00382 ATPases associated with a variety of cellular activities CYB_RS01190 SM00448 cheY-homologous receiver domain CYB_RS01190 SM00862 Transcriptional regulatory protein, C terminal CYB_RS01230 SM00382 ATPases associated with a variety of cellular activities CYB_RS01230 SM00962 SRP54-type protein, GTPase domain CYB_RS01230 SM00963 SRP54-type protein, helical bundle domain CYB_RS01255 SM00382 ATPases associated with a variety of cellular activities CYB_RS01265 SM00562 CYB_RS01265 CYB_RS01330 SM00448 cheY-homologous receiver domain CYB_RS01335 SM01211 CYB_RS01335 CYB_RS01360 SM00859 Semialdehyde dehydrogenase, NAD binding domain CYB_RS01420 SM00360 RNA recognition motif CYB_RS01460 SM00382 ATPases associated with a variety of cellular activities CYB_RS01460 SM00962 SRP54-type protein, GTPase domain CYB_RS01460 SM00963 SRP54-type protein, helical bundle domain CYB_RS01510 SM01207 CYB_RS01510 CYB_RS01515 SM00387 Histidine kinase-like ATPases CYB_RS01515 SM00433 TopoisomeraseII CYB_RS01525 SM00244 prohibitin homologues CYB_RS01575 SM00959 Rho termination factor, N-terminal domain CYB_RS01630 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family CYB_RS01650 SM00240 Forkhead associated domain CYB_RS01650 SM00267 diguanylate cyclase CYB_RS01670 SM00448 cheY-homologous receiver domain CYB_RS01705 SM00646 CYB_RS01705 CYB_RS01805 SM00849 Metallo-beta-lactamase superfamily CYB_RS01805 SM00903 Flavin reductase like domain CYB_RS01840 SM00382 ATPases associated with a variety of cellular activities CYB_RS01880 SM00382 ATPases associated with a variety of cellular activities CYB_RS01895 SM00530 Helix-turn-helix XRE-family like proteins CYB_RS01905 SM00899 CYB_RS01905 CYB_RS02025 SM00028 Tetratricopeptide repeats CYB_RS02035 SM00382 ATPases associated with a variety of cellular activities CYB_RS02050 SM00841 Elongation factor P, C-terminal CYB_RS02050 SM01185 CYB_RS02050 CYB_RS02200 SM00855 Phosphoglycerate mutase family CYB_RS02210 SM00220 Serine/Threonine protein kinases, catalytic domain CYB_RS02220 SM00028 Tetratricopeptide repeats CYB_RS02245 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. CYB_RS02280 SM01091 Transporter associated domain CYB_RS02320 SM01248 CYB_RS02320 CYB_RS02325 SM01247 CYB_RS02325 CYB_RS02345 SM00464 Found in ATP-dependent protease La (LON) CYB_RS02405 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CYB_RS02405 SM00073 Histidine Phosphotransfer domain CYB_RS02405 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CYB_RS02405 SM00091 PAS domain CYB_RS02405 SM00387 Histidine kinase-like ATPases CYB_RS02405 SM00388 His Kinase A (phosphoacceptor) domain CYB_RS02405 SM00448 cheY-homologous receiver domain CYB_RS02430 SM00989 CYB_RS02430 CYB_RS02460 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase CYB_RS02470 SM00220 Serine/Threonine protein kinases, catalytic domain CYB_RS02505 SM01321 CYB_RS02505 CYB_RS02615 SM00877 CYB_RS02615 CYB_RS02655 SM01234 CYB_RS02655 CYB_RS02705 SM00989 CYB_RS02705 CYB_RS02725 SM00989 CYB_RS02725 CYB_RS02735 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CYB_RS02745 SM00382 ATPases associated with a variety of cellular activities CYB_RS02855 SM00382 ATPases associated with a variety of cellular activities CYB_RS02860 SM00382 ATPases associated with a variety of cellular activities CYB_RS02885 SM00382 ATPases associated with a variety of cellular activities CYB_RS02885 SM01086 C-terminal, D2-small domain, of ClpB protein CYB_RS02920 SM00919 Malic enzyme, NAD binding domain CYB_RS02920 SM01274 CYB_RS02920 CYB_RS02995 SM00382 ATPases associated with a variety of cellular activities CYB_RS03015 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CYB_RS03020 SM00220 Serine/Threonine protein kinases, catalytic domain CYB_RS03090 SM00460 Transglutaminase/protease-like homologues CYB_RS03110 SM01005 Alanine racemase, C-terminal domain CYB_RS03160 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CYB_RS03180 SM00487 DEAD-like helicases superfamily CYB_RS03180 SM00490 helicase superfamily c-terminal domain CYB_RS03205 SM00933 CYB_RS03205 CYB_RS03210 SM00642 Alpha-amylase domain CYB_RS03360 SM00845 GatB domain CYB_RS03375 SM00387 Histidine kinase-like ATPases CYB_RS03375 SM00388 His Kinase A (phosphoacceptor) domain CYB_RS03385 SM00327 von Willebrand factor (vWF) type A domain CYB_RS03385 SM00382 ATPases associated with a variety of cellular activities CYB_RS03425 SM00240 Forkhead associated domain CYB_RS03440 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CYB_RS03440 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CYB_RS03460 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CYB_RS03480 SM00306 Hint (Hedgehog/Intein) domain N-terminal region CYB_RS03500 SM00382 ATPases associated with a variety of cellular activities CYB_RS03505 SM00849 Metallo-beta-lactamase superfamily CYB_RS03535 SM00271 DnaJ molecular chaperone homology domain CYB_RS03570 SM00478 endonuclease III CYB_RS03570 SM00525 CYB_RS03570 CYB_RS03585 SM00358 Double-stranded RNA binding motif CYB_RS03585 SM00535 Ribonuclease III family CYB_RS03620 SM00563 Phosphate acyltransferases CYB_RS03630 SM00831 Cation transporter/ATPase, N-terminus CYB_RS03670 SM00382 ATPases associated with a variety of cellular activities CYB_RS03675 SM00382 ATPases associated with a variety of cellular activities CYB_RS03785 SM00861 Transketolase, pyrimidine binding domain CYB_RS03820 SM00411 bacterial (prokaryotic) histone like domain CYB_RS03840 SM00487 DEAD-like helicases superfamily CYB_RS03840 SM00490 helicase superfamily c-terminal domain CYB_RS03910 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CYB_RS03910 SM00245 tail specific protease CYB_RS03920 SM00360 RNA recognition motif CYB_RS03965 SM00880 CYB_RS03965 CYB_RS04030 SM00316 Ribosomal protein S1-like RNA-binding domain CYB_RS04055 SM00833 Cobalamin synthesis protein cobW C-terminal domain CYB_RS04085 SM00387 Histidine kinase-like ATPases CYB_RS04085 SM00388 His Kinase A (phosphoacceptor) domain CYB_RS04090 SM00421 helix_turn_helix, Lux Regulon CYB_RS04115 SM00450 Rhodanese Homology Domain CYB_RS04195 SM00419 helix_turn_helix, cAMP Regulatory protein CYB_RS04205 SM00487 DEAD-like helicases superfamily CYB_RS04205 SM00490 helicase superfamily c-terminal domain CYB_RS04230 SM00729 Elongator protein 3, MiaB family, Radical SAM CYB_RS04240 SM00822 CYB_RS04240 CYB_RS04245 SM00240 Forkhead associated domain CYB_RS04260 SM00411 bacterial (prokaryotic) histone like domain CYB_RS04305 SM00226 Low molecular weight phosphatase family CYB_RS04355 SM00244 prohibitin homologues CYB_RS04360 SM00244 prohibitin homologues CYB_RS04365 SM00448 cheY-homologous receiver domain CYB_RS04365 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CYB_RS04385 SM00838 Elongation factor G C-terminus CYB_RS04385 SM00889 Elongation factor G, domain IV CYB_RS04395 SM01403 CYB_RS04395 CYB_RS04445 SM00062 Bacterial periplasmic substrate-binding proteins CYB_RS04450 SM00382 ATPases associated with a variety of cellular activities CYB_RS04485 SM01094 CpcD/allophycocyanin linker domain CYB_RS04490 SM00567 E-Z type HEAT repeats CYB_RS04495 SM00567 E-Z type HEAT repeats CYB_RS04515 SM00331 Sigma factor PP2C-like phosphatases CYB_RS04515 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain CYB_RS04525 SM00220 Serine/Threonine protein kinases, catalytic domain CYB_RS04555 SM00507 HNH nucleases CYB_RS04570 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CYB_RS04605 SM00388 His Kinase A (phosphoacceptor) domain CYB_RS04700 SM00650 Ribosomal RNA adenine dimethylases CYB_RS04705 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CYB_RS04705 SM00387 Histidine kinase-like ATPases CYB_RS04705 SM00388 His Kinase A (phosphoacceptor) domain CYB_RS04710 SM00670 Large family of predicted nucleotide-binding domains CYB_RS04720 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CYB_RS04725 SM00478 endonuclease III CYB_RS04725 SM00525 CYB_RS04725 CYB_RS04760 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CYB_RS04785 SM00387 Histidine kinase-like ATPases CYB_RS04795 SM01230 CYB_RS04795 CYB_RS04810 SM00267 diguanylate cyclase CYB_RS04810 SM00448 cheY-homologous receiver domain CYB_RS04865 SM00855 Phosphoglycerate mutase family CYB_RS04890 SM00450 Rhodanese Homology Domain CYB_RS04920 SM01001 AIR carboxylase CYB_RS04975 SM00421 helix_turn_helix, Lux Regulon CYB_RS04975 SM00448 cheY-homologous receiver domain CYB_RS04980 SM00470 ParB-like nuclease domain CYB_RS05045 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CYB_RS05125 SM00363 S4 RNA-binding domain CYB_RS05130 SM00382 ATPases associated with a variety of cellular activities CYB_RS05155 SM00305 Hint (Hedgehog/Intein) domain C-terminal region CYB_RS05155 SM00306 Hint (Hedgehog/Intein) domain N-terminal region CYB_RS05155 SM00382 ATPases associated with a variety of cellular activities CYB_RS05165 SM01001 AIR carboxylase CYB_RS05175 SM00382 ATPases associated with a variety of cellular activities CYB_RS05190 SM00422 helix_turn_helix, mercury resistance CYB_RS05210 SM00363 S4 RNA-binding domain CYB_RS05210 SM01390 CYB_RS05210 CYB_RS05290 SM00054 EF-hand, calcium binding motif CYB_RS05295 SM00363 S4 RNA-binding domain CYB_RS05310 SM00729 Elongator protein 3, MiaB family, Radical SAM CYB_RS05315 SM00861 Transketolase, pyrimidine binding domain CYB_RS05360 SM00448 cheY-homologous receiver domain CYB_RS05360 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CYB_RS05365 SM00244 prohibitin homologues CYB_RS05515 SM00382 ATPases associated with a variety of cellular activities CYB_RS05525 SM00360 RNA recognition motif CYB_RS05555 SM00833 Cobalamin synthesis protein cobW C-terminal domain CYB_RS05570 SM00240 Forkhead associated domain CYB_RS05615 SM00481 DNA polymerase alpha chain like domain CYB_RS05635 SM00028 Tetratricopeptide repeats CYB_RS05650 SM00567 E-Z type HEAT repeats CYB_RS05670 SM00220 Serine/Threonine protein kinases, catalytic domain CYB_RS05670 SM00320 WD40 repeats CYB_RS05680 SM00382 ATPases associated with a variety of cellular activities CYB_RS05685 SM00460 Transglutaminase/protease-like homologues CYB_RS05690 SM00098 Alkaline phosphatase homologues CYB_RS05695 SM00347 helix_turn_helix multiple antibiotic resistance protein CYB_RS05725 SM00382 ATPases associated with a variety of cellular activities CYB_RS05730 SM00487 DEAD-like helicases superfamily CYB_RS05730 SM00490 helicase superfamily c-terminal domain CYB_RS05730 SM00982 CYB_RS05730 CYB_RS05730 SM01058 CarD-like/TRCF domain CYB_RS05795 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. CYB_RS05795 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CYB_RS05800 SM00649 Ribosomal protein L11/L12 CYB_RS05840 SM00020 Trypsin-like serine protease CYB_RS05860 SM00382 ATPases associated with a variety of cellular activities CYB_RS05870 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain CYB_RS05895 SM00421 helix_turn_helix, Lux Regulon CYB_RS05895 SM00448 cheY-homologous receiver domain CYB_RS05905 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain CYB_RS05905 SM01232 CYB_RS05905 CYB_RS05930 SM00387 Histidine kinase-like ATPases CYB_RS05930 SM00388 His Kinase A (phosphoacceptor) domain CYB_RS05935 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CYB_RS05935 SM00091 PAS domain CYB_RS05940 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CYB_RS05940 SM00465 GIY-YIG type nucleases (URI domain) CYB_RS05965 SM00028 Tetratricopeptide repeats CYB_RS06000 SM00382 ATPases associated with a variety of cellular activities CYB_RS06105 SM00318 Staphylococcal nuclease homologues CYB_RS06185 SM00382 ATPases associated with a variety of cellular activities CYB_RS06215 SM00917 LeuA allosteric (dimerisation) domain CYB_RS06255 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CYB_RS06340 SM00382 ATPases associated with a variety of cellular activities CYB_RS06345 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CYB_RS06345 SM00292 breast cancer carboxy-terminal domain CYB_RS06345 SM00532 Ligase N family CYB_RS06350 SM00382 ATPases associated with a variety of cellular activities CYB_RS06350 SM00994 ClpX C4-type zinc finger CYB_RS06350 SM01086 C-terminal, D2-small domain, of ClpB protein CYB_RS06385 SM00421 helix_turn_helix, Lux Regulon CYB_RS06385 SM00448 cheY-homologous receiver domain CYB_RS06390 SM00387 Histidine kinase-like ATPases CYB_RS06390 SM00388 His Kinase A (phosphoacceptor) domain CYB_RS06395 SM00388 His Kinase A (phosphoacceptor) domain CYB_RS06435 SM00421 helix_turn_helix, Lux Regulon CYB_RS06435 SM00448 cheY-homologous receiver domain CYB_RS06440 SM00710 Parallel beta-helix repeats CYB_RS06455 SM01002 Alanine dehydrogenase/PNT, C-terminal domain CYB_RS06455 SM01003 Alanine dehydrogenase/PNT, N-terminal domain CYB_RS06465 SM00382 ATPases associated with a variety of cellular activities CYB_RS06470 SM00474 3'-5' exonuclease CYB_RS06595 SM00240 Forkhead associated domain CYB_RS06600 SM00240 Forkhead associated domain CYB_RS06615 SM00878 Biotin carboxylase C-terminal domain CYB_RS06630 SM00271 DnaJ molecular chaperone homology domain CYB_RS06660 SM00382 ATPases associated with a variety of cellular activities CYB_RS06685 SM00905 Dihydroneopterin aldolase CYB_RS06695 SM00387 Histidine kinase-like ATPases CYB_RS06695 SM00388 His Kinase A (phosphoacceptor) domain CYB_RS06700 SM01065 Starch binding domain CYB_RS06715 SM00507 HNH nucleases CYB_RS06755 SM00369 Leucine-rich repeats, typical (most populated) subfamily CYB_RS06790 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CYB_RS06845 SM01094 CpcD/allophycocyanin linker domain CYB_RS06850 SM00382 ATPases associated with a variety of cellular activities CYB_RS06855 SM00917 LeuA allosteric (dimerisation) domain CYB_RS06870 SM00316 Ribosomal protein S1-like RNA-binding domain CYB_RS06870 SM00322 K homology RNA-binding domain CYB_RS06875 SM01080 CYB_RS06875 CYB_RS06910 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CYB_RS06930 SM00100 Cyclic nucleotide-monophosphate binding domain CYB_RS06980 SM00382 ATPases associated with a variety of cellular activities CYB_RS07065 SM00960 Roadblock/LC7 domain CYB_RS07100 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CYB_RS07155 SM00563 Phosphate acyltransferases CYB_RS07200 SM00382 ATPases associated with a variety of cellular activities CYB_RS07215 SM00028 Tetratricopeptide repeats CYB_RS07215 SM00220 Serine/Threonine protein kinases, catalytic domain CYB_RS07240 SM00400 zinc finger CYB_RS07240 SM00493 CYB_RS07240 CYB_RS07245 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CYB_RS07250 SM00220 Serine/Threonine protein kinases, catalytic domain CYB_RS07285 SM00479 CYB_RS07285 CYB_RS07315 SM00382 ATPases associated with a variety of cellular activities CYB_RS07320 SM00480 DNA polymerase III beta subunit CYB_RS07325 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CYB_RS07325 SM00954 Region found in RelA / SpoT proteins CYB_RS07380 SM00382 ATPases associated with a variety of cellular activities CYB_RS07450 SM00859 Semialdehyde dehydrogenase, NAD binding domain CYB_RS07460 SM00028 Tetratricopeptide repeats CYB_RS07505 SM00662 RNA polymerases D CYB_RS07535 SM00937 CYB_RS07535 CYB_RS07555 SM00382 ATPases associated with a variety of cellular activities CYB_RS07655 SM00434 DNA Topoisomerase IV CYB_RS07685 SM01240 CYB_RS07685 CYB_RS07700 SM00883 Chaperonin 10 Kd subunit CYB_RS07740 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CYB_RS07740 SM00245 tail specific protease CYB_RS07760 SM01329 CYB_RS07760 CYB_RS07795 SM00387 Histidine kinase-like ATPases CYB_RS07795 SM00388 His Kinase A (phosphoacceptor) domain CYB_RS07795 SM00448 cheY-homologous receiver domain CYB_RS07805 SM00831 Cation transporter/ATPase, N-terminus CYB_RS07855 SM00382 ATPases associated with a variety of cellular activities CYB_RS07860 SM01400 CYB_RS07860 CYB_RS07865 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CYB_RS07865 SM00091 PAS domain CYB_RS07865 SM00387 Histidine kinase-like ATPases CYB_RS07870 SM00448 cheY-homologous receiver domain CYB_RS07885 SM00382 ATPases associated with a variety of cellular activities CYB_RS07930 SM00825 Beta-ketoacyl synthase CYB_RS07985 SM01329 CYB_RS07985 CYB_RS08005 SM00729 Elongator protein 3, MiaB family, Radical SAM CYB_RS08035 SM00382 ATPases associated with a variety of cellular activities CYB_RS08050 SM00382 ATPases associated with a variety of cellular activities CYB_RS08080 SM00487 DEAD-like helicases superfamily CYB_RS08080 SM00490 helicase superfamily c-terminal domain CYB_RS08100 SM00487 DEAD-like helicases superfamily CYB_RS08100 SM00490 helicase superfamily c-terminal domain CYB_RS08110 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CYB_RS08125 SM00563 Phosphate acyltransferases CYB_RS08165 SM00028 Tetratricopeptide repeats CYB_RS08215 SM00487 DEAD-like helicases superfamily CYB_RS08215 SM00490 helicase superfamily c-terminal domain CYB_RS08230 SM00567 E-Z type HEAT repeats CYB_RS08235 SM00028 Tetratricopeptide repeats CYB_RS08270 SM00382 ATPases associated with a variety of cellular activities CYB_RS08280 SM00448 cheY-homologous receiver domain CYB_RS08305 SM00244 prohibitin homologues CYB_RS08330 SM00732 Likely ribonuclease with RNase H fold. CYB_RS08335 SM00996 S-adenosyl-L-homocysteine hydrolase CYB_RS08335 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CYB_RS08395 SM00732 Likely ribonuclease with RNase H fold. CYB_RS08405 SM00861 Transketolase, pyrimidine binding domain CYB_RS08430 SM00849 Metallo-beta-lactamase superfamily CYB_RS08430 SM00903 Flavin reductase like domain CYB_RS08455 SM00093 SERine Proteinase INhibitors CYB_RS08530 SM00877 CYB_RS08530 CYB_RS08540 SM00961 Ribulose bisphosphate carboxylase, small chain CYB_RS08550 SM00877 CYB_RS08550 CYB_RS08555 SM00877 CYB_RS08555 CYB_RS08560 SM00382 ATPases associated with a variety of cellular activities CYB_RS08600 SM00481 DNA polymerase alpha chain like domain CYB_RS08645 SM00382 ATPases associated with a variety of cellular activities CYB_RS08650 SM00271 DnaJ molecular chaperone homology domain CYB_RS08660 SM00897 FIST N domain CYB_RS08660 SM01204 CYB_RS08660 CYB_RS08665 SM00257 Lysin motif CYB_RS08670 SM00840 CYB_RS08670 CYB_RS08675 SM00729 Elongator protein 3, MiaB family, Radical SAM CYB_RS08680 SM00316 Ribosomal protein S1-like RNA-binding domain CYB_RS08715 SM00382 ATPases associated with a variety of cellular activities CYB_RS08735 SM00989 CYB_RS08735 CYB_RS08750 SM00989 CYB_RS08750 CYB_RS08860 SM00220 Serine/Threonine protein kinases, catalytic domain CYB_RS08895 SM00382 ATPases associated with a variety of cellular activities CYB_RS08945 SM00382 ATPases associated with a variety of cellular activities CYB_RS08950 SM00382 ATPases associated with a variety of cellular activities CYB_RS08975 SM00382 ATPases associated with a variety of cellular activities CYB_RS09000 SM00363 S4 RNA-binding domain CYB_RS09015 SM00387 Histidine kinase-like ATPases CYB_RS09015 SM00388 His Kinase A (phosphoacceptor) domain CYB_RS09015 SM01248 CYB_RS09015 CYB_RS09025 SM00382 ATPases associated with a variety of cellular activities CYB_RS09060 SM00822 CYB_RS09060 CYB_RS09100 SM00382 ATPases associated with a variety of cellular activities CYB_RS09125 SM00998 Adenylosuccinate lyase C-terminus CYB_RS09160 SM00450 Rhodanese Homology Domain CYB_RS09170 SM00849 Metallo-beta-lactamase superfamily CYB_RS09175 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CYB_RS09185 SM00984 UDP binding domain CYB_RS09210 SM00073 Histidine Phosphotransfer domain CYB_RS09210 SM00260 Two component signalling adaptor domain CYB_RS09210 SM00387 Histidine kinase-like ATPases CYB_RS09210 SM00448 cheY-homologous receiver domain CYB_RS09210 SM01231 CYB_RS09210 CYB_RS09215 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CYB_RS09215 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CYB_RS09220 SM00260 Two component signalling adaptor domain CYB_RS09225 SM00448 cheY-homologous receiver domain CYB_RS09230 SM00448 cheY-homologous receiver domain CYB_RS09235 SM00448 cheY-homologous receiver domain CYB_RS09245 SM00893 Electron transfer flavoprotein domain CYB_RS09250 SM00893 Electron transfer flavoprotein domain CYB_RS09260 SM00836 DALR anticodon binding domain CYB_RS09260 SM01016 Arginyl tRNA synthetase N terminal dom CYB_RS09340 SM00382 ATPases associated with a variety of cellular activities CYB_RS09345 SM00967 RNA 2'-O ribose methyltransferase substrate binding CYB_RS09380 SM00933 CYB_RS09380 CYB_RS09420 SM00642 Alpha-amylase domain CYB_RS09445 SM00861 Transketolase, pyrimidine binding domain CYB_RS09450 SM00028 Tetratricopeptide repeats CYB_RS09535 SM00421 helix_turn_helix, Lux Regulon CYB_RS09570 SM00450 Rhodanese Homology Domain CYB_RS09575 SM00382 ATPases associated with a variety of cellular activities CYB_RS09610 SM00988 UreE urease accessory protein, N-terminal domain CYB_RS09675 SM00382 ATPases associated with a variety of cellular activities CYB_RS09680 SM00448 cheY-homologous receiver domain CYB_RS09680 SM00862 Transcriptional regulatory protein, C terminal CYB_RS09690 SM00287 Bacterial SH3 domain homologues CYB_RS09710 SM00729 Elongator protein 3, MiaB family, Radical SAM CYB_RS09730 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. CYB_RS09815 SM00448 cheY-homologous receiver domain CYB_RS09845 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CYB_RS09845 SM00331 Sigma factor PP2C-like phosphatases CYB_RS09880 SM00232 JAB/MPN domain CYB_RS09890 SM00450 Rhodanese Homology Domain CYB_RS09905 SM00345 helix_turn_helix gluconate operon transcriptional repressor CYB_RS09910 SM00382 ATPases associated with a variety of cellular activities CYB_RS09960 SM00822 CYB_RS09960 CYB_RS10005 SM00382 ATPases associated with a variety of cellular activities CYB_RS10030 SM00567 E-Z type HEAT repeats CYB_RS10050 SM00864 Tubulin/FtsZ family, GTPase domain CYB_RS10050 SM00865 Tubulin/FtsZ family, C-terminal domain CYB_RS10070 SM00924 MgtE intracellular N domain CYB_RS10120 SM00062 Bacterial periplasmic substrate-binding proteins CYB_RS10195 SM01359 CYB_RS10195 CYB_RS10195 SM01360 CYB_RS10195 CYB_RS10205 SM00382 ATPases associated with a variety of cellular activities CYB_RS10210 SM00382 ATPases associated with a variety of cellular activities CYB_RS10220 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CYB_RS10245 SM00116 Domain in cystathionine beta-synthase and other proteins. CYB_RS10250 SM00478 endonuclease III CYB_RS10250 SM00525 CYB_RS10250 CYB_RS10270 SM00240 Forkhead associated domain CYB_RS10280 SM00642 Alpha-amylase domain CYB_RS10300 SM00382 ATPases associated with a variety of cellular activities CYB_RS10305 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CYB_RS10305 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CYB_RS10305 SM00091 PAS domain CYB_RS10305 SM00267 diguanylate cyclase CYB_RS10330 SM00028 Tetratricopeptide repeats CYB_RS10330 SM00271 DnaJ molecular chaperone homology domain CYB_RS10335 SM00062 Bacterial periplasmic substrate-binding proteins CYB_RS10345 SM00240 Forkhead associated domain CYB_RS10370 SM00028 Tetratricopeptide repeats CYB_RS10495 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain CYB_RS10495 SM00240 Forkhead associated domain CYB_RS10505 SM00904 Riboflavin kinase CYB_RS10530 SM01018 B12 binding domain CYB_RS10570 SM00028 Tetratricopeptide repeats CYB_RS10585 SM00419 helix_turn_helix, cAMP Regulatory protein CYB_RS10610 SM00487 DEAD-like helicases superfamily CYB_RS10610 SM00490 helicase superfamily c-terminal domain CYB_RS10640 SM00382 ATPases associated with a variety of cellular activities CYB_RS10655 SM00363 S4 RNA-binding domain CYB_RS10670 SM00393 Putative single-stranded nucleic acids-binding domain CYB_RS10690 SM00729 Elongator protein 3, MiaB family, Radical SAM CYB_RS10695 SM00322 K homology RNA-binding domain CYB_RS10775 SM00852 Probable molybdopterin binding domain CYB_RS10825 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. CYB_RS10850 SM00853 MutL C terminal dimerisation domain CYB_RS10850 SM01340 CYB_RS10850 CYB_RS10855 SM00756 CYB_RS10855 CYB_RS10860 SM00267 diguanylate cyclase CYB_RS10860 SM00448 cheY-homologous receiver domain CYB_RS10995 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CYB_RS11040 SM00563 Phosphate acyltransferases CYB_RS11140 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CYB_RS11210 SM00316 Ribosomal protein S1-like RNA-binding domain CYB_RS11220 SM00833 Cobalamin synthesis protein cobW C-terminal domain CYB_RS11230 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CYB_RS11230 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CYB_RS11230 SM00493 CYB_RS11230 CYB_RS11240 SM00729 Elongator protein 3, MiaB family, Radical SAM CYB_RS11295 SM00463 Small MutS-related domain CYB_RS11295 SM00533 DNA-binding domain of DNA mismatch repair MUTS family CYB_RS11295 SM00534 ATPase domain of DNA mismatch repair MUTS family CYB_RS11300 SM00930 CYB_RS11300 CYB_RS11340 SM00382 ATPases associated with a variety of cellular activities CYB_RS11405 SM00382 ATPases associated with a variety of cellular activities CYB_RS11420 SM00986 Uracil DNA glycosylase superfamily CYB_RS11420 SM00987 UreE urease accessory protein, C-terminal domain CYB_RS11480 SM00487 DEAD-like helicases superfamily CYB_RS11480 SM00490 helicase superfamily c-terminal domain CYB_RS11480 SM01142 CYB_RS11480 CYB_RS11495 SM00248 ankyrin repeats CYB_RS11505 SM00091 PAS domain CYB_RS11505 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CYB_RS11505 SM00387 Histidine kinase-like ATPases CYB_RS11505 SM00388 His Kinase A (phosphoacceptor) domain CYB_RS11520 SM00116 Domain in cystathionine beta-synthase and other proteins. CYB_RS11540 SM00028 Tetratricopeptide repeats CYB_RS11540 SM00271 DnaJ molecular chaperone homology domain CYB_RS11545 SM00248 ankyrin repeats CYB_RS11580 SM00663 RNA polymerase I subunit A N-terminus CYB_RS11590 SM00986 Uracil DNA glycosylase superfamily CYB_RS11590 SM00987 UreE urease accessory protein, C-terminal domain CYB_RS11645 SM00957 SecA DEAD-like domain CYB_RS11645 SM00958 SecA preprotein cross-linking domain CYB_RS11670 SM01004 Delta-aminolevulinic acid dehydratase CYB_RS11710 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CYB_RS11710 SM00387 Histidine kinase-like ATPases CYB_RS11710 SM00388 His Kinase A (phosphoacceptor) domain CYB_RS11785 SM01350 CYB_RS11785 CYB_RS11820 SM00028 Tetratricopeptide repeats CYB_RS11895 SM00448 cheY-homologous receiver domain CYB_RS11895 SM00862 Transcriptional regulatory protein, C terminal CYB_RS11900 SM00382 ATPases associated with a variety of cellular activities CYB_RS11925 SM00327 von Willebrand factor (vWF) type A domain CYB_RS11955 SM00220 Serine/Threonine protein kinases, catalytic domain CYB_RS11985 SM00347 helix_turn_helix multiple antibiotic resistance protein CYB_RS12005 SM00382 ATPases associated with a variety of cellular activities CYB_RS12005 SM01086 C-terminal, D2-small domain, of ClpB protein CYB_RS12010 SM00316 Ribosomal protein S1-like RNA-binding domain CYB_RS12010 SM00357 Cold shock protein domain CYB_RS12010 SM00955 CYB_RS12010 CYB_RS12030 SM00642 Alpha-amylase domain CYB_RS12040 SM01192 CYB_RS12040 CYB_RS12040 SM01193 CYB_RS12040 CYB_RS12045 SM00100 Cyclic nucleotide-monophosphate binding domain CYB_RS12045 SM00419 helix_turn_helix, cAMP Regulatory protein CYB_RS12050 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CYB_RS12125 SM00382 ATPases associated with a variety of cellular activities CYB_RS12140 SM00955 CYB_RS12140 CYB_RS12145 SM00421 helix_turn_helix, Lux Regulon CYB_RS12145 SM00448 cheY-homologous receiver domain CYB_RS12165 SM01133 CYB_RS12165 CYB_RS12175 SM00448 cheY-homologous receiver domain CYB_RS12175 SM00862 Transcriptional regulatory protein, C terminal CYB_RS12180 SM00028 Tetratricopeptide repeats CYB_RS12235 SM00271 DnaJ molecular chaperone homology domain CYB_RS12240 SM00729 Elongator protein 3, MiaB family, Radical SAM CYB_RS12245 SM00220 Serine/Threonine protein kinases, catalytic domain CYB_RS12255 SM00961 Ribulose bisphosphate carboxylase, small chain CYB_RS12325 SM00852 Probable molybdopterin binding domain CYB_RS12365 SM01382 CYB_RS12365 CYB_RS12365 SM01383 CYB_RS12365 CYB_RS12380 SM00322 K homology RNA-binding domain CYB_RS12400 SM01374 CYB_RS12400 CYB_RS12405 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CYB_RS12455 SM00316 Ribosomal protein S1-like RNA-binding domain CYB_RS12490 SM00382 ATPases associated with a variety of cellular activities CYB_RS12490 SM00393 Putative single-stranded nucleic acids-binding domain CYB_RS12515 SM01093 CYB_RS12515 CYB_RS12520 SM00382 ATPases associated with a variety of cellular activities CYB_RS12605 SM00507 HNH nucleases CYB_RS12635 SM00100 Cyclic nucleotide-monophosphate binding domain CYB_RS12635 SM00419 helix_turn_helix, cAMP Regulatory protein CYB_RS12650 SM00829 Enoylreductase CYB_RS12790 SM00028 Tetratricopeptide repeats CYB_RS12810 SM00028 Tetratricopeptide repeats CYB_RS12815 SM00448 cheY-homologous receiver domain CYB_RS12815 SM00862 Transcriptional regulatory protein, C terminal CYB_RS12820 SM01240 CYB_RS12820 CYB_RS12885 SM00938 Nitrogen regulatory protein P-II CYB_RS12910 SM00028 Tetratricopeptide repeats CYB_RS12915 SM00450 Rhodanese Homology Domain CYB_RS12950 SM00382 ATPases associated with a variety of cellular activities CYB_RS12965 SM00387 Histidine kinase-like ATPases CYB_RS12965 SM00388 His Kinase A (phosphoacceptor) domain CYB_RS12970 SM00448 cheY-homologous receiver domain CYB_RS12970 SM00862 Transcriptional regulatory protein, C terminal CYB_RS13005 SM00533 DNA-binding domain of DNA mismatch repair MUTS family CYB_RS13005 SM00534 ATPase domain of DNA mismatch repair MUTS family CYB_RS13030 SM00567 E-Z type HEAT repeats CYB_RS13035 SM01094 CpcD/allophycocyanin linker domain CYB_RS13065 SM00950 CYB_RS13065 CYB_RS13085 SM00448 cheY-homologous receiver domain CYB_RS13090 SM00448 cheY-homologous receiver domain CYB_RS13095 SM00260 Two component signalling adaptor domain CYB_RS13100 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CYB_RS13100 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CYB_RS13105 SM00073 Histidine Phosphotransfer domain CYB_RS13105 SM00260 Two component signalling adaptor domain CYB_RS13105 SM00387 Histidine kinase-like ATPases CYB_RS13105 SM00448 cheY-homologous receiver domain CYB_RS13125 SM00155 Phospholipase D. Active site motifs. CYB_RS13125 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CYB_RS13130 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. CYB_RS13210 SM00360 RNA recognition motif CYB_RS13245 SM00271 DnaJ molecular chaperone homology domain CYB_RS13285 SM00387 Histidine kinase-like ATPases CYB_RS13285 SM00388 His Kinase A (phosphoacceptor) domain CYB_RS13310 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CYB_RS13310 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CYB_RS13310 SM00091 PAS domain CYB_RS13310 SM00387 Histidine kinase-like ATPases CYB_RS13310 SM00388 His Kinase A (phosphoacceptor) domain CYB_RS13335 SM00729 Elongator protein 3, MiaB family, Radical SAM CYB_RS13350 SM01230 CYB_RS13350 CYB_RS13365 SM00487 DEAD-like helicases superfamily CYB_RS13365 SM00490 helicase superfamily c-terminal domain CYB_RS13420 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. CYB_RS13430 SM01228 CYB_RS13430 CYB_RS13460 SM00535 Ribonuclease III family CYB_RS13465 SM00967 RNA 2'-O ribose methyltransferase substrate binding CYB_RS13530 SM00382 ATPases associated with a variety of cellular activities CYB_RS13555 SM00062 Bacterial periplasmic substrate-binding proteins CYB_RS13560 SM00798 AICARFT/IMPCHase bienzyme CYB_RS13560 SM00851 MGS-like domain CYB_RS13580 SM00448 cheY-homologous receiver domain CYB_RS13580 SM00862 Transcriptional regulatory protein, C terminal CYB_RS13640 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain CYB_RS13685 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. CYB_RS13725 SM00028 Tetratricopeptide repeats CYB_RS13765 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CYB_RS13765 SM00493 CYB_RS13765 CYB_RS13780 SM00116 Domain in cystathionine beta-synthase and other proteins. CYB_RS13790 SM00460 Transglutaminase/protease-like homologues CYB_RS13820 SM00729 Elongator protein 3, MiaB family, Radical SAM CYB_RS13860 SM00873 B3/4 domain CYB_RS13860 SM00874 tRNA synthetase B5 domain CYB_RS13860 SM00896 Ferredoxin-fold anticodon binding domain CYB_RS13880 SM00905 Dihydroneopterin aldolase CYB_RS13905 SM00331 Sigma factor PP2C-like phosphatases CYB_RS13905 SM00448 cheY-homologous receiver domain CYB_RS13955 SM00271 DnaJ molecular chaperone homology domain CYB_RS13980 SM00968 SMC proteins Flexible Hinge Domain CYB_RS14005 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain CYB_RS14030 SM00530 Helix-turn-helix XRE-family like proteins CYB_RS14065 SM00382 ATPases associated with a variety of cellular activities CYB_RS14095 SM00073 Histidine Phosphotransfer domain CYB_RS14095 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CYB_RS14095 SM00091 PAS domain CYB_RS14095 SM00387 Histidine kinase-like ATPases CYB_RS14095 SM00388 His Kinase A (phosphoacceptor) domain CYB_RS14095 SM00448 cheY-homologous receiver domain CYB_RS14100 SM00100 Cyclic nucleotide-monophosphate binding domain CYB_RS14110 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CYB_RS14110 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CYB_RS14110 SM00091 PAS domain CYB_RS14110 SM00387 Histidine kinase-like ATPases CYB_RS14110 SM00388 His Kinase A (phosphoacceptor) domain CYB_RS14115 SM00028 Tetratricopeptide repeats CYB_RS14135 SM00909 Sporulation and spore germination CYB_RS14155 SM00382 ATPases associated with a variety of cellular activities