CYA_RS00005 SM00382 ATPases associated with a variety of cellular activities CYA_RS00005 SM00760 Bacterial dnaA protein helix-turn-helix domain CYA_RS00020 SM00382 ATPases associated with a variety of cellular activities CYA_RS00025 SM00822 CYA_RS00025 CYA_RS00035 SM00434 DNA Topoisomerase IV CYA_RS00090 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CYA_RS00100 SM00905 Dihydroneopterin aldolase CYA_RS00200 SM00220 Serine/Threonine protein kinases, catalytic domain CYA_RS00200 SM00320 WD40 repeats CYA_RS00225 SM00567 E-Z type HEAT repeats CYA_RS00240 SM00028 Tetratricopeptide repeats CYA_RS00270 SM00481 DNA polymerase alpha chain like domain CYA_RS00315 SM00240 Forkhead associated domain CYA_RS00325 SM01321 CYA_RS00325 CYA_RS00385 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. CYA_RS00455 SM00448 cheY-homologous receiver domain CYA_RS00485 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CYA_RS00485 SM00331 Sigma factor PP2C-like phosphatases CYA_RS00515 SM00864 Tubulin/FtsZ family, GTPase domain CYA_RS00515 SM00865 Tubulin/FtsZ family, C-terminal domain CYA_RS00535 SM00567 E-Z type HEAT repeats CYA_RS00590 SM00360 RNA recognition motif CYA_RS00620 SM00271 DnaJ molecular chaperone homology domain CYA_RS00700 SM00382 ATPases associated with a variety of cellular activities CYA_RS00725 SM00382 ATPases associated with a variety of cellular activities CYA_RS00730 SM00382 ATPases associated with a variety of cellular activities CYA_RS00745 SM01321 CYA_RS00745 CYA_RS00820 SM00729 Elongator protein 3, MiaB family, Radical SAM CYA_RS00825 SM00852 Probable molybdopterin binding domain CYA_RS00855 SM00382 ATPases associated with a variety of cellular activities CYA_RS00855 SM01086 C-terminal, D2-small domain, of ClpB protein CYA_RS00860 SM00316 Ribosomal protein S1-like RNA-binding domain CYA_RS00860 SM00357 Cold shock protein domain CYA_RS00860 SM00955 CYA_RS00860 CYA_RS00880 SM00642 Alpha-amylase domain CYA_RS00895 SM00020 Trypsin-like serine protease CYA_RS00915 SM00382 ATPases associated with a variety of cellular activities CYA_RS00925 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain CYA_RS00950 SM00421 helix_turn_helix, Lux Regulon CYA_RS00950 SM00448 cheY-homologous receiver domain CYA_RS00960 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain CYA_RS00960 SM01232 CYA_RS00960 CYA_RS00980 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CYA_RS00980 SM00465 GIY-YIG type nucleases (URI domain) CYA_RS00990 SM00220 Serine/Threonine protein kinases, catalytic domain CYA_RS01000 SM00331 Sigma factor PP2C-like phosphatases CYA_RS01000 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain CYA_RS01020 SM00567 E-Z type HEAT repeats CYA_RS01025 SM00567 E-Z type HEAT repeats CYA_RS01030 SM01094 CpcD/allophycocyanin linker domain CYA_RS01090 SM00093 SERine Proteinase INhibitors CYA_RS01195 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CYA_RS01195 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CYA_RS01195 SM00091 PAS domain CYA_RS01195 SM00387 Histidine kinase-like ATPases CYA_RS01195 SM00388 His Kinase A (phosphoacceptor) domain CYA_RS01235 SM00642 Alpha-amylase domain CYA_RS01305 SM00560 LamG-like jellyroll fold domain CYA_RS01315 SM00382 ATPases associated with a variety of cellular activities CYA_RS01355 SM00967 RNA 2'-O ribose methyltransferase substrate binding CYA_RS01360 SM00535 Ribonuclease III family CYA_RS01385 SM01228 CYA_RS01385 CYA_RS01395 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. CYA_RS01425 SM00411 bacterial (prokaryotic) histone like domain CYA_RS01445 SM00873 B3/4 domain CYA_RS01445 SM00874 tRNA synthetase B5 domain CYA_RS01445 SM00896 Ferredoxin-fold anticodon binding domain CYA_RS01455 SM00382 ATPases associated with a variety of cellular activities CYA_RS01470 SM00382 ATPases associated with a variety of cellular activities CYA_RS01500 SM00487 DEAD-like helicases superfamily CYA_RS01500 SM00490 helicase superfamily c-terminal domain CYA_RS01515 SM00487 DEAD-like helicases superfamily CYA_RS01515 SM00490 helicase superfamily c-terminal domain CYA_RS01520 SM00100 Cyclic nucleotide-monophosphate binding domain CYA_RS01525 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CYA_RS01540 SM00563 Phosphate acyltransferases CYA_RS01580 SM00382 ATPases associated with a variety of cellular activities CYA_RS01690 SM00845 GatB domain CYA_RS01715 SM00327 von Willebrand factor (vWF) type A domain CYA_RS01715 SM00382 ATPases associated with a variety of cellular activities CYA_RS01755 SM00220 Serine/Threonine protein kinases, catalytic domain CYA_RS01880 SM00642 Alpha-amylase domain CYA_RS01900 SM00382 ATPases associated with a variety of cellular activities CYA_RS01935 SM00663 RNA polymerase I subunit A N-terminus CYA_RS01945 SM00986 Uracil DNA glycosylase superfamily CYA_RS01945 SM00987 UreE urease accessory protein, C-terminal domain CYA_RS01980 SM00382 ATPases associated with a variety of cellular activities CYA_RS01985 SM00448 cheY-homologous receiver domain CYA_RS01985 SM00862 Transcriptional regulatory protein, C terminal CYA_RS02015 SM00961 Ribulose bisphosphate carboxylase, small chain CYA_RS02025 SM00240 Forkhead associated domain CYA_RS02105 SM00861 Transketolase, pyrimidine binding domain CYA_RS02145 SM00322 K homology RNA-binding domain CYA_RS02205 SM00382 ATPases associated with a variety of cellular activities CYA_RS02215 SM00881 CoA binding domain CYA_RS02250 SM00448 cheY-homologous receiver domain CYA_RS02270 SM00240 Forkhead associated domain CYA_RS02270 SM00267 diguanylate cyclase CYA_RS02280 SM00984 UDP binding domain CYA_RS02290 SM00507 HNH nucleases CYA_RS02325 SM00877 CYA_RS02325 CYA_RS02380 SM01094 CpcD/allophycocyanin linker domain CYA_RS02405 SM00360 RNA recognition motif CYA_RS02415 SM00422 helix_turn_helix, mercury resistance CYA_RS02445 SM00989 CYA_RS02445 CYA_RS02460 SM00989 CYA_RS02460 CYA_RS02490 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CYA_RS02490 SM00474 3'-5' exonuclease CYA_RS02490 SM00475 5'-3' exonuclease CYA_RS02490 SM00482 DNA polymerase A domain CYA_RS02565 SM00852 Probable molybdopterin binding domain CYA_RS02575 SM01321 CYA_RS02575 CYA_RS02630 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CYA_RS02630 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CYA_RS02630 SM00493 CYA_RS02630 CYA_RS02655 SM00917 LeuA allosteric (dimerisation) domain CYA_RS02725 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CYA_RS02730 SM00838 Elongation factor G C-terminus CYA_RS02790 SM00028 Tetratricopeptide repeats CYA_RS02835 SM00988 UreE urease accessory protein, N-terminal domain CYA_RS02890 SM00382 ATPases associated with a variety of cellular activities CYA_RS02895 SM00382 ATPases associated with a variety of cellular activities CYA_RS02905 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CYA_RS02920 SM01209 CYA_RS02920 CYA_RS02920 SM01210 CYA_RS02920 CYA_RS02930 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CYA_RS02940 SM00849 Metallo-beta-lactamase superfamily CYA_RS02945 SM01130 CYA_RS02945 CYA_RS02990 SM00387 Histidine kinase-like ATPases CYA_RS02990 SM00388 His Kinase A (phosphoacceptor) domain CYA_RS02990 SM01248 CYA_RS02990 CYA_RS02995 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. CYA_RS03035 SM00448 cheY-homologous receiver domain CYA_RS03040 SM01211 CYA_RS03040 CYA_RS03065 SM00859 Semialdehyde dehydrogenase, NAD binding domain CYA_RS03085 SM00382 ATPases associated with a variety of cellular activities CYA_RS03085 SM01086 C-terminal, D2-small domain, of ClpB protein CYA_RS03115 SM00919 Malic enzyme, NAD binding domain CYA_RS03115 SM01274 CYA_RS03115 CYA_RS03165 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CYA_RS03170 SM00924 MgtE intracellular N domain CYA_RS03215 SM00062 Bacterial periplasmic substrate-binding proteins CYA_RS03250 SM00729 Elongator protein 3, MiaB family, Radical SAM CYA_RS03285 SM00460 Transglutaminase/protease-like homologues CYA_RS03295 SM00116 Domain in cystathionine beta-synthase and other proteins. CYA_RS03330 SM00732 Likely ribonuclease with RNase H fold. CYA_RS03335 SM00996 S-adenosyl-L-homocysteine hydrolase CYA_RS03335 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CYA_RS03355 SM00729 Elongator protein 3, MiaB family, Radical SAM CYA_RS03400 SM00054 EF-hand, calcium binding motif CYA_RS03450 SM00487 DEAD-like helicases superfamily CYA_RS03450 SM00490 helicase superfamily c-terminal domain CYA_RS03470 SM00363 S4 RNA-binding domain CYA_RS03555 SM00382 ATPases associated with a variety of cellular activities CYA_RS03555 SM00962 SRP54-type protein, GTPase domain CYA_RS03555 SM00963 SRP54-type protein, helical bundle domain CYA_RS03570 SM00957 SecA DEAD-like domain CYA_RS03570 SM00958 SecA preprotein cross-linking domain CYA_RS03595 SM00855 Phosphoglycerate mutase family CYA_RS03620 SM00363 S4 RNA-binding domain CYA_RS03650 SM00098 Alkaline phosphatase homologues CYA_RS03655 SM00460 Transglutaminase/protease-like homologues CYA_RS03660 SM00382 ATPases associated with a variety of cellular activities CYA_RS03665 SM00729 Elongator protein 3, MiaB family, Radical SAM CYA_RS03680 SM00271 DnaJ molecular chaperone homology domain CYA_RS03705 SM00388 His Kinase A (phosphoacceptor) domain CYA_RS03710 SM00387 Histidine kinase-like ATPases CYA_RS03710 SM00388 His Kinase A (phosphoacceptor) domain CYA_RS03715 SM00421 helix_turn_helix, Lux Regulon CYA_RS03715 SM00448 cheY-homologous receiver domain CYA_RS03745 SM00382 ATPases associated with a variety of cellular activities CYA_RS03745 SM00994 ClpX C4-type zinc finger CYA_RS03745 SM01086 C-terminal, D2-small domain, of ClpB protein CYA_RS03750 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CYA_RS03750 SM00292 breast cancer carboxy-terminal domain CYA_RS03750 SM00532 Ligase N family CYA_RS03755 SM00358 Double-stranded RNA binding motif CYA_RS03755 SM00535 Ribonuclease III family CYA_RS03775 SM00478 endonuclease III CYA_RS03775 SM00525 CYA_RS03775 CYA_RS03795 SM00363 S4 RNA-binding domain CYA_RS03830 SM00729 Elongator protein 3, MiaB family, Radical SAM CYA_RS03835 SM00316 Ribosomal protein S1-like RNA-binding domain CYA_RS03860 SM00382 ATPases associated with a variety of cellular activities CYA_RS03885 SM00989 CYA_RS03885 CYA_RS03900 SM00989 CYA_RS03900 CYA_RS03940 SM00387 Histidine kinase-like ATPases CYA_RS03955 SM00116 Domain in cystathionine beta-synthase and other proteins. CYA_RS03960 SM00478 endonuclease III CYA_RS03960 SM00525 CYA_RS03960 CYA_RS03980 SM00240 Forkhead associated domain CYA_RS03985 SM00878 Biotin carboxylase C-terminal domain CYA_RS04000 SM00271 DnaJ molecular chaperone homology domain CYA_RS04150 SM00382 ATPases associated with a variety of cellular activities CYA_RS04155 SM00382 ATPases associated with a variety of cellular activities CYA_RS04245 SM00478 endonuclease III CYA_RS04245 SM00525 CYA_RS04245 CYA_RS04250 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CYA_RS04260 SM00670 Large family of predicted nucleotide-binding domains CYA_RS04265 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CYA_RS04265 SM00387 Histidine kinase-like ATPases CYA_RS04265 SM00388 His Kinase A (phosphoacceptor) domain CYA_RS04270 SM00650 Ribosomal RNA adenine dimethylases CYA_RS04315 SM00470 ParB-like nuclease domain CYA_RS04320 SM00421 helix_turn_helix, Lux Regulon CYA_RS04320 SM00448 cheY-homologous receiver domain CYA_RS04370 SM00822 CYA_RS04370 CYA_RS04375 SM00240 Forkhead associated domain CYA_RS04390 SM00411 bacterial (prokaryotic) histone like domain CYA_RS04430 SM01350 CYA_RS04430 CYA_RS04445 SM00382 ATPases associated with a variety of cellular activities CYA_RS04455 SM00028 Tetratricopeptide repeats CYA_RS04515 SM00419 helix_turn_helix, cAMP Regulatory protein CYA_RS04575 SM00331 Sigma factor PP2C-like phosphatases CYA_RS04575 SM00448 cheY-homologous receiver domain CYA_RS04615 SM00959 Rho termination factor, N-terminal domain CYA_RS04690 SM01091 Transporter associated domain CYA_RS04725 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. CYA_RS04775 SM00382 ATPases associated with a variety of cellular activities CYA_RS04780 SM00369 Leucine-rich repeats, typical (most populated) subfamily CYA_RS04790 SM00382 ATPases associated with a variety of cellular activities CYA_RS04795 SM01093 CYA_RS04795 CYA_RS04820 SM00382 ATPases associated with a variety of cellular activities CYA_RS04820 SM00393 Putative single-stranded nucleic acids-binding domain CYA_RS04830 SM00448 cheY-homologous receiver domain CYA_RS04830 SM00862 Transcriptional regulatory protein, C terminal CYA_RS04895 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain CYA_RS04920 SM00382 ATPases associated with a variety of cellular activities CYA_RS04975 SM00562 CYA_RS04975 CYA_RS04980 SM00382 ATPases associated with a variety of cellular activities CYA_RS05005 SM00382 ATPases associated with a variety of cellular activities CYA_RS05005 SM00962 SRP54-type protein, GTPase domain CYA_RS05005 SM00963 SRP54-type protein, helical bundle domain CYA_RS05025 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CYA_RS05045 SM00387 Histidine kinase-like ATPases CYA_RS05110 SM00382 ATPases associated with a variety of cellular activities CYA_RS05115 SM00967 RNA 2'-O ribose methyltransferase substrate binding CYA_RS05130 SM00642 Alpha-amylase domain CYA_RS05135 SM00933 CYA_RS05135 CYA_RS05165 SM00382 ATPases associated with a variety of cellular activities CYA_RS05190 SM00710 Parallel beta-helix repeats CYA_RS05205 SM01002 Alanine dehydrogenase/PNT, C-terminal domain CYA_RS05205 SM01003 Alanine dehydrogenase/PNT, N-terminal domain CYA_RS05210 SM00474 3'-5' exonuclease CYA_RS05260 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CYA_RS05275 SM01321 CYA_RS05275 CYA_RS05290 SM00052 Putative diguanylate phosphodiesterase CYA_RS05295 SM00849 Metallo-beta-lactamase superfamily CYA_RS05305 SM00271 DnaJ molecular chaperone homology domain CYA_RS05320 SM01321 CYA_RS05320 CYA_RS05350 SM00507 HNH nucleases CYA_RS05420 SM00316 Ribosomal protein S1-like RNA-binding domain CYA_RS05470 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CYA_RS05475 SM01374 CYA_RS05475 CYA_RS05495 SM00322 K homology RNA-binding domain CYA_RS05510 SM01382 CYA_RS05510 CYA_RS05510 SM01383 CYA_RS05510 CYA_RS05535 SM00028 Tetratricopeptide repeats CYA_RS05610 SM00961 Ribulose bisphosphate carboxylase, small chain CYA_RS05645 SM00563 Phosphate acyltransferases CYA_RS05675 SM00382 ATPases associated with a variety of cellular activities CYA_RS05695 SM00955 CYA_RS05695 CYA_RS05700 SM00421 helix_turn_helix, Lux Regulon CYA_RS05700 SM00448 cheY-homologous receiver domain CYA_RS05765 SM00316 Ribosomal protein S1-like RNA-binding domain CYA_RS05815 SM00732 Likely ribonuclease with RNase H fold. CYA_RS05875 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CYA_RS05880 SM00937 CYA_RS05880 CYA_RS05895 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CYA_RS05895 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CYA_RS05910 SM00028 Tetratricopeptide repeats CYA_RS05975 SM01207 CYA_RS05975 CYA_RS05990 SM00841 Elongation factor P, C-terminal CYA_RS05990 SM01185 CYA_RS05990 CYA_RS06040 SM00062 Bacterial periplasmic substrate-binding proteins CYA_RS06045 SM00382 ATPases associated with a variety of cellular activities CYA_RS06100 SM00244 prohibitin homologues CYA_RS06105 SM00244 prohibitin homologues CYA_RS06125 SM00838 Elongation factor G C-terminus CYA_RS06125 SM00889 Elongation factor G, domain IV CYA_RS06135 SM01403 CYA_RS06135 CYA_RS06265 SM00382 ATPases associated with a variety of cellular activities CYA_RS06280 SM00100 Cyclic nucleotide-monophosphate binding domain CYA_RS06280 SM00419 helix_turn_helix, cAMP Regulatory protein CYA_RS06295 SM00829 Enoylreductase CYA_RS06330 SM00028 Tetratricopeptide repeats CYA_RS06360 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CYA_RS06360 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CYA_RS06360 SM00091 PAS domain CYA_RS06360 SM00387 Histidine kinase-like ATPases CYA_RS06360 SM00388 His Kinase A (phosphoacceptor) domain CYA_RS06430 SM01230 CYA_RS06430 CYA_RS06440 SM00822 CYA_RS06440 CYA_RS06455 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CYA_RS06455 SM00493 CYA_RS06455 CYA_RS06570 SM00028 Tetratricopeptide repeats CYA_RS06575 SM00448 cheY-homologous receiver domain CYA_RS06575 SM00862 Transcriptional regulatory protein, C terminal CYA_RS06585 SM01133 CYA_RS06585 CYA_RS06615 SM00382 ATPases associated with a variety of cellular activities CYA_RS06640 SM00883 Chaperonin 10 Kd subunit CYA_RS06655 SM01240 CYA_RS06655 CYA_RS06685 SM00434 DNA Topoisomerase IV CYA_RS06795 SM00382 ATPases associated with a variety of cellular activities CYA_RS06815 SM00937 CYA_RS06815 CYA_RS06845 SM00662 RNA polymerases D CYA_RS06900 SM01005 Alanine racemase, C-terminal domain CYA_RS06920 SM00487 DEAD-like helicases superfamily CYA_RS06920 SM00490 helicase superfamily c-terminal domain CYA_RS06925 SM01329 CYA_RS06925 CYA_RS07035 SM00100 Cyclic nucleotide-monophosphate binding domain CYA_RS07055 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CYA_RS07120 SM00938 Nitrogen regulatory protein P-II CYA_RS07170 SM00363 S4 RNA-binding domain CYA_RS07170 SM01390 CYA_RS07170 CYA_RS07195 SM00387 Histidine kinase-like ATPases CYA_RS07195 SM00433 TopoisomeraseII CYA_RS07205 SM00244 prohibitin homologues CYA_RS07275 SM00419 helix_turn_helix, cAMP Regulatory protein CYA_RS07285 SM00422 helix_turn_helix, mercury resistance CYA_RS07300 SM00382 ATPases associated with a variety of cellular activities CYA_RS07310 SM01001 AIR carboxylase CYA_RS07320 SM00305 Hint (Hedgehog/Intein) domain C-terminal region CYA_RS07320 SM00306 Hint (Hedgehog/Intein) domain N-terminal region CYA_RS07320 SM00382 ATPases associated with a variety of cellular activities CYA_RS07345 SM00382 ATPases associated with a variety of cellular activities CYA_RS07350 SM00363 S4 RNA-binding domain CYA_RS07415 SM00382 ATPases associated with a variety of cellular activities CYA_RS07445 SM00849 Metallo-beta-lactamase superfamily CYA_RS07445 SM00903 Flavin reductase like domain CYA_RS07470 SM00382 ATPases associated with a variety of cellular activities CYA_RS07545 SM00481 DNA polymerase alpha chain like domain CYA_RS07595 SM00382 ATPases associated with a variety of cellular activities CYA_RS07600 SM00877 CYA_RS07600 CYA_RS07605 SM00877 CYA_RS07605 CYA_RS07615 SM00961 Ribulose bisphosphate carboxylase, small chain CYA_RS07625 SM00877 CYA_RS07625 CYA_RS07680 SM00382 ATPases associated with a variety of cellular activities CYA_RS07690 SM00226 Low molecular weight phosphatase family CYA_RS07770 SM00480 DNA polymerase III beta subunit CYA_RS07800 SM00849 Metallo-beta-lactamase superfamily CYA_RS07810 SM00387 Histidine kinase-like ATPases CYA_RS07810 SM00388 His Kinase A (phosphoacceptor) domain CYA_RS07810 SM00448 cheY-homologous receiver domain CYA_RS07820 SM00831 Cation transporter/ATPase, N-terminus CYA_RS07825 SM00849 Metallo-beta-lactamase superfamily CYA_RS07825 SM00903 Flavin reductase like domain CYA_RS07845 SM00855 Phosphoglycerate mutase family CYA_RS07865 SM01001 AIR carboxylase CYA_RS07875 SM00833 Cobalamin synthesis protein cobW C-terminal domain CYA_RS07905 SM00360 RNA recognition motif CYA_RS07915 SM00382 ATPases associated with a variety of cellular activities CYA_RS07985 SM00116 Domain in cystathionine beta-synthase and other proteins. CYA_RS07985 SM00924 MgtE intracellular N domain CYA_RS08020 SM00028 Tetratricopeptide repeats CYA_RS08025 SM00861 Transketolase, pyrimidine binding domain CYA_RS08050 SM00450 Rhodanese Homology Domain CYA_RS08085 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family CYA_RS08120 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CYA_RS08125 SM00849 Metallo-beta-lactamase superfamily CYA_RS08135 SM00450 Rhodanese Homology Domain CYA_RS08160 SM00028 Tetratricopeptide repeats CYA_RS08170 SM00998 Adenylosuccinate lyase C-terminus CYA_RS08195 SM00382 ATPases associated with a variety of cellular activities CYA_RS08260 SM00851 MGS-like domain CYA_RS08260 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CYA_RS08305 SM00347 helix_turn_helix multiple antibiotic resistance protein CYA_RS08325 SM00382 ATPases associated with a variety of cellular activities CYA_RS08330 SM00487 DEAD-like helicases superfamily CYA_RS08330 SM00490 helicase superfamily c-terminal domain CYA_RS08330 SM00982 CYA_RS08330 CYA_RS08330 SM01058 CarD-like/TRCF domain CYA_RS08390 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. CYA_RS08390 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CYA_RS08395 SM00649 Ribosomal protein L11/L12 CYA_RS08420 SM00393 Putative single-stranded nucleic acids-binding domain CYA_RS08435 SM00363 S4 RNA-binding domain CYA_RS08465 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CYA_RS08465 SM00245 tail specific protease CYA_RS08480 SM01329 CYA_RS08480 CYA_RS08485 SM00100 Cyclic nucleotide-monophosphate binding domain CYA_RS08485 SM00419 helix_turn_helix, cAMP Regulatory protein CYA_RS08490 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CYA_RS08515 SM00028 Tetratricopeptide repeats CYA_RS08550 SM00382 ATPases associated with a variety of cellular activities CYA_RS08560 SM00028 Tetratricopeptide repeats CYA_RS08685 SM00530 Helix-turn-helix XRE-family like proteins CYA_RS08700 SM00382 ATPases associated with a variety of cellular activities CYA_RS08725 SM00382 ATPases associated with a variety of cellular activities CYA_RS08735 SM00028 Tetratricopeptide repeats CYA_RS08745 SM00028 Tetratricopeptide repeats CYA_RS08770 SM00382 ATPases associated with a variety of cellular activities CYA_RS08785 SM00116 Domain in cystathionine beta-synthase and other proteins. CYA_RS08800 SM00859 Semialdehyde dehydrogenase, NAD binding domain CYA_RS08850 SM00382 ATPases associated with a variety of cellular activities CYA_RS08860 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CYA_RS08865 SM00220 Serine/Threonine protein kinases, catalytic domain CYA_RS08905 SM00448 cheY-homologous receiver domain CYA_RS08905 SM00862 Transcriptional regulatory protein, C terminal CYA_RS08910 SM00382 ATPases associated with a variety of cellular activities CYA_RS08915 SM00897 FIST N domain CYA_RS08915 SM01204 CYA_RS08915 CYA_RS08920 SM00257 Lysin motif CYA_RS08925 SM00840 CYA_RS08925 CYA_RS08950 SM01248 CYA_RS08950 CYA_RS08955 SM01247 CYA_RS08955 CYA_RS08975 SM00464 Found in ATP-dependent protease La (LON) CYA_RS08995 SM00421 helix_turn_helix, Lux Regulon CYA_RS09010 SM01321 CYA_RS09010 CYA_RS09030 SM00450 Rhodanese Homology Domain CYA_RS09040 SM00382 ATPases associated with a variety of cellular activities CYA_RS09045 SM00382 ATPases associated with a variety of cellular activities CYA_RS09085 SM00271 DnaJ molecular chaperone homology domain CYA_RS09125 SM00382 ATPases associated with a variety of cellular activities CYA_RS09140 SM00318 Staphylococcal nuclease homologues CYA_RS09160 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CYA_RS09160 SM00954 Region found in RelA / SpoT proteins CYA_RS09230 SM01321 CYA_RS09230 CYA_RS09255 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CYA_RS09265 SM00382 ATPases associated with a variety of cellular activities CYA_RS09270 SM00382 ATPases associated with a variety of cellular activities CYA_RS09280 SM01359 CYA_RS09280 CYA_RS09280 SM01360 CYA_RS09280 CYA_RS09450 SM00318 Staphylococcal nuclease homologues CYA_RS09455 SM00028 Tetratricopeptide repeats CYA_RS09490 SM00487 DEAD-like helicases superfamily CYA_RS09490 SM00490 helicase superfamily c-terminal domain CYA_RS09530 SM00382 ATPases associated with a variety of cellular activities CYA_RS09555 SM00448 cheY-homologous receiver domain CYA_RS09555 SM00862 Transcriptional regulatory protein, C terminal CYA_RS09580 SM00382 ATPases associated with a variety of cellular activities CYA_RS09595 SM00533 DNA-binding domain of DNA mismatch repair MUTS family CYA_RS09595 SM00534 ATPase domain of DNA mismatch repair MUTS family CYA_RS09620 SM00567 E-Z type HEAT repeats CYA_RS09625 SM01094 CpcD/allophycocyanin linker domain CYA_RS09660 SM00382 ATPases associated with a variety of cellular activities CYA_RS09665 SM00849 Metallo-beta-lactamase superfamily CYA_RS09695 SM00271 DnaJ molecular chaperone homology domain CYA_RS09730 SM00642 Alpha-amylase domain CYA_RS09740 SM01321 CYA_RS09740 CYA_RS09800 SM00028 Tetratricopeptide repeats CYA_RS09835 SM00909 Sporulation and spore germination CYA_RS09860 SM00327 von Willebrand factor (vWF) type A domain CYA_RS10005 SM00028 Tetratricopeptide repeats CYA_RS10025 SM00028 Tetratricopeptide repeats CYA_RS10100 SM00220 Serine/Threonine protein kinases, catalytic domain CYA_RS10110 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. CYA_RS10115 SM00155 Phospholipase D. Active site motifs. CYA_RS10115 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CYA_RS10135 SM00073 Histidine Phosphotransfer domain CYA_RS10135 SM00260 Two component signalling adaptor domain CYA_RS10135 SM00387 Histidine kinase-like ATPases CYA_RS10135 SM00448 cheY-homologous receiver domain CYA_RS10140 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CYA_RS10155 SM00260 Two component signalling adaptor domain CYA_RS10160 SM00448 cheY-homologous receiver domain CYA_RS10165 SM00448 cheY-homologous receiver domain CYA_RS10185 SM00950 CYA_RS10185 CYA_RS10200 SM00306 Hint (Hedgehog/Intein) domain N-terminal region CYA_RS10240 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase CYA_RS10250 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CYA_RS10260 SM00646 CYA_RS10260 CYA_RS10270 SM01065 Starch binding domain CYA_RS10275 SM00387 Histidine kinase-like ATPases CYA_RS10275 SM00388 His Kinase A (phosphoacceptor) domain CYA_RS10295 SM00420 helix_turn_helix, Deoxyribose operon repressor CYA_RS10310 SM00382 ATPases associated with a variety of cellular activities CYA_RS10325 SM00563 Phosphate acyltransferases CYA_RS10415 SM01080 CYA_RS10415 CYA_RS10420 SM00316 Ribosomal protein S1-like RNA-binding domain CYA_RS10420 SM00322 K homology RNA-binding domain CYA_RS10435 SM01321 CYA_RS10435 CYA_RS10445 SM00917 LeuA allosteric (dimerisation) domain CYA_RS10450 SM00382 ATPases associated with a variety of cellular activities CYA_RS10455 SM01094 CpcD/allophycocyanin linker domain CYA_RS10475 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CYA_RS10485 SM00116 Domain in cystathionine beta-synthase and other proteins. CYA_RS10485 SM00382 ATPases associated with a variety of cellular activities CYA_RS10590 SM00986 Uracil DNA glycosylase superfamily CYA_RS10590 SM00987 UreE urease accessory protein, C-terminal domain CYA_RS10600 SM00729 Elongator protein 3, MiaB family, Radical SAM CYA_RS10630 SM00220 Serine/Threonine protein kinases, catalytic domain CYA_RS10800 SM00421 helix_turn_helix, Lux Regulon CYA_RS10800 SM00448 cheY-homologous receiver domain CYA_RS10885 SM00382 ATPases associated with a variety of cellular activities CYA_RS10890 SM00448 cheY-homologous receiver domain CYA_RS10890 SM00862 Transcriptional regulatory protein, C terminal CYA_RS10900 SM00287 Bacterial SH3 domain homologues CYA_RS10925 SM00729 Elongator protein 3, MiaB family, Radical SAM CYA_RS10940 SM00861 Transketolase, pyrimidine binding domain CYA_RS10955 SM00400 zinc finger CYA_RS10955 SM00493 CYA_RS10955 CYA_RS10980 SM00028 Tetratricopeptide repeats CYA_RS10980 SM00220 Serine/Threonine protein kinases, catalytic domain CYA_RS10990 SM00448 cheY-homologous receiver domain CYA_RS10990 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CYA_RS11030 SM00861 Transketolase, pyrimidine binding domain CYA_RS11035 SM00729 Elongator protein 3, MiaB family, Radical SAM CYA_RS11055 SM00421 helix_turn_helix, Lux Regulon CYA_RS11060 SM00091 PAS domain CYA_RS11060 SM00387 Histidine kinase-like ATPases CYA_RS11060 SM00388 His Kinase A (phosphoacceptor) domain CYA_RS11065 SM00822 CYA_RS11065 CYA_RS11075 SM01321 CYA_RS11075 CYA_RS11100 SM00833 Cobalamin synthesis protein cobW C-terminal domain CYA_RS11125 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CYA_RS11195 SM00316 Ribosomal protein S1-like RNA-binding domain CYA_RS11260 SM00448 cheY-homologous receiver domain CYA_RS11260 SM00862 Transcriptional regulatory protein, C terminal CYA_RS11265 SM01240 CYA_RS11265 CYA_RS11305 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain CYA_RS11305 SM00240 Forkhead associated domain CYA_RS11315 SM00904 Riboflavin kinase CYA_RS11335 SM01018 B12 binding domain CYA_RS11350 SM01321 CYA_RS11350 CYA_RS11425 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CYA_RS11445 SM00382 ATPases associated with a variety of cellular activities CYA_RS11470 SM00347 helix_turn_helix multiple antibiotic resistance protein CYA_RS11510 SM00028 Tetratricopeptide repeats CYA_RS11595 SM00232 JAB/MPN domain CYA_RS11605 SM00450 Rhodanese Homology Domain CYA_RS11620 SM00345 helix_turn_helix gluconate operon transcriptional repressor CYA_RS11665 SM00822 CYA_RS11665 CYA_RS11830 SM00933 CYA_RS11830 CYA_RS11865 SM00235 Zinc-dependent metalloprotease CYA_RS11875 SM00382 ATPases associated with a variety of cellular activities CYA_RS11920 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. CYA_RS12000 SM01192 CYA_RS12000 CYA_RS12000 SM01193 CYA_RS12000 CYA_RS12035 SM00487 DEAD-like helicases superfamily CYA_RS12035 SM00490 helicase superfamily c-terminal domain CYA_RS12045 SM00833 Cobalamin synthesis protein cobW C-terminal domain CYA_RS12060 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CYA_RS12060 SM00091 PAS domain CYA_RS12060 SM00387 Histidine kinase-like ATPases CYA_RS12060 SM00388 His Kinase A (phosphoacceptor) domain CYA_RS12080 SM00387 Histidine kinase-like ATPases CYA_RS12080 SM00388 His Kinase A (phosphoacceptor) domain CYA_RS12100 SM00930 CYA_RS12100 CYA_RS12105 SM01321 CYA_RS12105 CYA_RS12115 SM00463 Small MutS-related domain CYA_RS12115 SM00533 DNA-binding domain of DNA mismatch repair MUTS family CYA_RS12115 SM00534 ATPase domain of DNA mismatch repair MUTS family CYA_RS12135 SM01321 CYA_RS12135 CYA_RS12165 SM01234 CYA_RS12165 CYA_RS12230 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. CYA_RS12250 SM00853 MutL C terminal dimerisation domain CYA_RS12250 SM01340 CYA_RS12250 CYA_RS12255 SM00756 CYA_RS12255 CYA_RS12260 SM00267 diguanylate cyclase CYA_RS12260 SM00448 cheY-homologous receiver domain CYA_RS12280 SM00382 ATPases associated with a variety of cellular activities CYA_RS12285 SM00382 ATPases associated with a variety of cellular activities CYA_RS12310 SM00487 DEAD-like helicases superfamily CYA_RS12310 SM00490 helicase superfamily c-terminal domain CYA_RS12335 SM00530 Helix-turn-helix XRE-family like proteins CYA_RS12360 SM01321 CYA_RS12360 CYA_RS12380 SM00448 cheY-homologous receiver domain CYA_RS12415 SM00028 Tetratricopeptide repeats CYA_RS12420 SM00567 E-Z type HEAT repeats CYA_RS12425 SM00487 DEAD-like helicases superfamily CYA_RS12425 SM00490 helicase superfamily c-terminal domain CYA_RS12425 SM01142 CYA_RS12425 CYA_RS12440 SM00248 ankyrin repeats CYA_RS12450 SM00729 Elongator protein 3, MiaB family, Radical SAM CYA_RS12450 SM00876 Biotin and Thiamin Synthesis associated domain CYA_RS12455 SM00091 PAS domain CYA_RS12455 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CYA_RS12455 SM00387 Histidine kinase-like ATPases CYA_RS12455 SM00388 His Kinase A (phosphoacceptor) domain CYA_RS12465 SM00116 Domain in cystathionine beta-synthase and other proteins. CYA_RS12485 SM00028 Tetratricopeptide repeats CYA_RS12485 SM00271 DnaJ molecular chaperone homology domain CYA_RS12490 SM00248 ankyrin repeats CYA_RS12515 SM00028 Tetratricopeptide repeats CYA_RS12515 SM00271 DnaJ molecular chaperone homology domain CYA_RS12520 SM00062 Bacterial periplasmic substrate-binding proteins CYA_RS12530 SM00240 Forkhead associated domain CYA_RS12600 SM00240 Forkhead associated domain CYA_RS12620 SM00072 Guanylate kinase homologues. CYA_RS12625 SM00448 cheY-homologous receiver domain CYA_RS12625 SM00862 Transcriptional regulatory protein, C terminal CYA_RS12670 SM00382 ATPases associated with a variety of cellular activities CYA_RS12720 SM00726 Ubiquitin-interacting motif. CYA_RS12745 SM01321 CYA_RS12745 CYA_RS12760 SM00267 diguanylate cyclase CYA_RS12760 SM00448 cheY-homologous receiver domain CYA_RS12780 SM00836 DALR anticodon binding domain CYA_RS12780 SM01016 Arginyl tRNA synthetase N terminal dom CYA_RS12785 SM00893 Electron transfer flavoprotein domain CYA_RS12790 SM00893 Electron transfer flavoprotein domain CYA_RS12800 SM00448 cheY-homologous receiver domain CYA_RS12805 SM00448 cheY-homologous receiver domain CYA_RS12810 SM00448 cheY-homologous receiver domain CYA_RS12815 SM00260 Two component signalling adaptor domain CYA_RS12820 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CYA_RS12820 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CYA_RS12825 SM00073 Histidine Phosphotransfer domain CYA_RS12825 SM00260 Two component signalling adaptor domain CYA_RS12825 SM00387 Histidine kinase-like ATPases CYA_RS12825 SM00448 cheY-homologous receiver domain CYA_RS12825 SM01231 CYA_RS12825 CYA_RS12870 SM00382 ATPases associated with a variety of cellular activities CYA_RS12890 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CYA_RS12895 SM00220 Serine/Threonine protein kinases, catalytic domain CYA_RS12915 SM00831 Cation transporter/ATPase, N-terminus CYA_RS12930 SM01004 Delta-aminolevulinic acid dehydratase CYA_RS12970 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CYA_RS12970 SM00387 Histidine kinase-like ATPases CYA_RS12970 SM00388 His Kinase A (phosphoacceptor) domain CYA_RS12995 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CYA_RS12995 SM00387 Histidine kinase-like ATPases CYA_RS12995 SM00388 His Kinase A (phosphoacceptor) domain CYA_RS13035 SM01387 CYA_RS13035 CYA_RS13040 SM00567 E-Z type HEAT repeats CYA_RS13050 SM00382 ATPases associated with a variety of cellular activities CYA_RS13060 SM00822 CYA_RS13060 CYA_RS13065 SM00382 ATPases associated with a variety of cellular activities CYA_RS13080 SM00388 His Kinase A (phosphoacceptor) domain CYA_RS13110 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CYA_RS13125 SM00507 HNH nucleases CYA_RS13135 SM00382 ATPases associated with a variety of cellular activities CYA_RS13160 SM00062 Bacterial periplasmic substrate-binding proteins CYA_RS13160 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CYA_RS13165 SM00798 AICARFT/IMPCHase bienzyme CYA_RS13165 SM00851 MGS-like domain CYA_RS13185 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CYA_RS13185 SM00245 tail specific protease CYA_RS13195 SM00360 RNA recognition motif CYA_RS13205 SM00507 HNH nucleases CYA_RS13245 SM00880 CYA_RS13245 CYA_RS13260 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CYA_RS13260 SM00073 Histidine Phosphotransfer domain CYA_RS13260 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CYA_RS13260 SM00091 PAS domain CYA_RS13260 SM00387 Histidine kinase-like ATPases CYA_RS13260 SM00388 His Kinase A (phosphoacceptor) domain CYA_RS13260 SM00448 cheY-homologous receiver domain CYA_RS13375 SM00220 Serine/Threonine protein kinases, catalytic domain CYA_RS13410 SM00960 Roadblock/LC7 domain CYA_RS13440 SM00825 Beta-ketoacyl synthase CYA_RS13460 SM00631 CYA_RS13460 CYA_RS13485 SM00382 ATPases associated with a variety of cellular activities CYA_RS13500 SM00448 cheY-homologous receiver domain CYA_RS13505 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CYA_RS13505 SM00091 PAS domain CYA_RS13505 SM00387 Histidine kinase-like ATPases CYA_RS13510 SM01400 CYA_RS13510 CYA_RS13515 SM00382 ATPases associated with a variety of cellular activities CYA_RS13570 SM00729 Elongator protein 3, MiaB family, Radical SAM CYA_RS13575 SM00788 Adenylosuccinate synthetase CYA_RS13580 SM00245 tail specific protease CYA_RS13595 SM00968 SMC proteins Flexible Hinge Domain CYA_RS13670 SM00382 ATPases associated with a variety of cellular activities CYA_RS13685 SM00382 ATPases associated with a variety of cellular activities CYA_RS13790 SM00073 Histidine Phosphotransfer domain CYA_RS13790 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CYA_RS13790 SM00091 PAS domain CYA_RS13790 SM00387 Histidine kinase-like ATPases CYA_RS13790 SM00388 His Kinase A (phosphoacceptor) domain CYA_RS13790 SM00448 cheY-homologous receiver domain CYA_RS13805 SM00271 DnaJ molecular chaperone homology domain CYA_RS13815 SM00387 Histidine kinase-like ATPases CYA_RS13820 SM00388 His Kinase A (phosphoacceptor) domain CYA_RS13850 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CYA_RS13850 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CYA_RS13850 SM00091 PAS domain CYA_RS13850 SM00387 Histidine kinase-like ATPases CYA_RS13850 SM00388 His Kinase A (phosphoacceptor) domain CYA_RS13870 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CYA_RS13870 SM00387 Histidine kinase-like ATPases