locus-tag	class	description
SYNRCC307_RS00005	COG0592	DNA-directed DNA polymerase activity
SYNRCC307_RS00015	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
SYNRCC307_RS00020	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
SYNRCC307_RS00025	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
SYNRCC307_RS00035	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
SYNRCC307_RS00050	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
SYNRCC307_RS00055	COG0552	protein localization to endoplasmic reticulum
SYNRCC307_RS00060	COG2208	phosphoserine phosphatase activity
SYNRCC307_RS00065	COG0165	Argininosuccinate lyase
SYNRCC307_RS00070	COG0724	RNA recognition motif
SYNRCC307_RS00075	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
SYNRCC307_RS00085	COG2081	HI0933 family
SYNRCC307_RS00090	COG1459	type II secretion system
SYNRCC307_RS00100	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
SYNRCC307_RS00105	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
SYNRCC307_RS00110	COG0484	heat shock protein binding
SYNRCC307_RS00120	COG1162	GTPase activity
SYNRCC307_RS00125	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
SYNRCC307_RS00130	COG0812	UDP-N-acetylmuramate dehydrogenase activity
SYNRCC307_RS00135	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
SYNRCC307_RS00140	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
SYNRCC307_RS00145	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
SYNRCC307_RS00150	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
SYNRCC307_RS00155	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
SYNRCC307_RS00160	COG0511	ligase activity, forming carbon-carbon bonds
SYNRCC307_RS00165	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
SYNRCC307_RS00185	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
SYNRCC307_RS00245	COG0518	GMP synthase (glutamine-hydrolyzing) activity
SYNRCC307_RS00245	COG0519	Catalyzes the synthesis of GMP from XMP
SYNRCC307_RS00260	COG0768	penicillin binding
SYNRCC307_RS00265	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
SYNRCC307_RS00265	COG0438	transferase activity, transferring glycosyl groups
SYNRCC307_RS00270	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
SYNRCC307_RS00280	COG2022	thiamine diphosphate biosynthetic process
SYNRCC307_RS00295	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
SYNRCC307_RS00300	COG0291	Belongs to the bacterial ribosomal protein bL35 family
SYNRCC307_RS00305	COG2385	sporulation resulting in formation of a cellular spore
SYNRCC307_RS00310	COG1215	transferase activity, transferring glycosyl groups
SYNRCC307_RS00315	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
SYNRCC307_RS00325	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
SYNRCC307_RS00330	COG0740	serine-type endopeptidase activity
SYNRCC307_RS00335	COG0544	peptidyl-prolyl cis-trans isomerase activity
SYNRCC307_RS00340	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
SYNRCC307_RS00345	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
SYNRCC307_RS00350	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
SYNRCC307_RS00360	COG0037	tRNA processing
SYNRCC307_RS00370	COG0556	nucleotide-excision repair
SYNRCC307_RS00375	COG0527	aspartate kinase activity
SYNRCC307_RS00385	COG2082	Precorrin-8x methylmutase
SYNRCC307_RS00390	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
SYNRCC307_RS00400	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
SYNRCC307_RS00420	COG1088	dTDP-glucose 4,6-dehydratase activity
SYNRCC307_RS00435	COG0653	protein targeting
SYNRCC307_RS00440	COG1045	serine acetyltransferase
SYNRCC307_RS00445	COG1725	Transcriptional regulator
SYNRCC307_RS00450	COG0412	Dienelactone hydrolase
SYNRCC307_RS00455	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
SYNRCC307_RS00460	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
SYNRCC307_RS00465	COG1372	Participates in initiation and elongation during chromosome replication
SYNRCC307_RS00465	COG0187	DNA topoisomerase II activity
SYNRCC307_RS00475	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
SYNRCC307_RS00480	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
SYNRCC307_RS00485	COG0386	Belongs to the glutathione peroxidase family
SYNRCC307_RS00490	COG2239	Acts as a magnesium transporter
SYNRCC307_RS00495	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
SYNRCC307_RS00520	COG0802	atpase or kinase
SYNRCC307_RS00525	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
SYNRCC307_RS00530	COG0586	Pfam SNARE associated Golgi protein
SYNRCC307_RS00535	COG0629	single-stranded DNA binding
SYNRCC307_RS00565	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
SYNRCC307_RS00590	COG4301	Catalyzes the SAM-dependent triple methylation of the alpha-amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine
SYNRCC307_RS00595	COG1262	PFAM Formylglycine-generating sulfatase enzyme
SYNRCC307_RS00605	COG0515	serine threonine protein kinase
SYNRCC307_RS00605	COG1357	PFAM Pentapeptide repeats (8 copies)
SYNRCC307_RS00610	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
SYNRCC307_RS00615	COG2255	four-way junction helicase activity
SYNRCC307_RS00625	COG1473	amidohydrolase
SYNRCC307_RS00640	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
SYNRCC307_RS00645	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
SYNRCC307_RS00650	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
SYNRCC307_RS00655	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
SYNRCC307_RS00660	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
SYNRCC307_RS00665	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
SYNRCC307_RS00670	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
SYNRCC307_RS00675	COG0571	ribonuclease III activity
SYNRCC307_RS00700	COG0058	SHG alpha-glucan phosphorylase activity
SYNRCC307_RS00730	COG0277	FAD linked oxidase domain protein
SYNRCC307_RS00740	COG0247	lactate metabolic process
SYNRCC307_RS00745	COG2192	nodulation
SYNRCC307_RS00760	COG0538	isocitrate dehydrogenase activity
SYNRCC307_RS00770	COG5398	heme oxygenase
SYNRCC307_RS00780	COG1132	(ABC) transporter
SYNRCC307_RS00785	COG0124	histidyl-tRNA synthetase
SYNRCC307_RS00790	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
SYNRCC307_RS00795	COG0709	Synthesizes selenophosphate from selenide and ATP
SYNRCC307_RS00815	COG0617	tRNA 3'-terminal CCA addition
SYNRCC307_RS00850	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
SYNRCC307_RS00855	COG0438	transferase activity, transferring glycosyl groups
SYNRCC307_RS00860	COG0367	asparagine synthase
SYNRCC307_RS00875	COG0463	Glycosyl transferase, family 2
SYNRCC307_RS00905	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
SYNRCC307_RS00905	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
SYNRCC307_RS00910	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
SYNRCC307_RS00940	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
SYNRCC307_RS00955	COG4447	cellulose binding
SYNRCC307_RS00960	COG1773	rubredoxin
SYNRCC307_RS00965	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
SYNRCC307_RS00970	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
SYNRCC307_RS00975	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
SYNRCC307_RS00980	COG0391	Required for morphogenesis under gluconeogenic growth conditions
SYNRCC307_RS00985	COG1089	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
SYNRCC307_RS00990	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
SYNRCC307_RS01005	COG1239	Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX
SYNRCC307_RS01005	COG1240	Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX
SYNRCC307_RS01020	COG0494	nUDIX hydrolase
SYNRCC307_RS01025	COG0415	Belongs to the DNA photolyase family
SYNRCC307_RS01030	COG2197	response regulator
SYNRCC307_RS01040	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
SYNRCC307_RS01055	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
SYNRCC307_RS01060	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
SYNRCC307_RS01065	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
SYNRCC307_RS01075	COG0583	DNA-binding transcription factor activity
SYNRCC307_RS01090	COG3349	Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'
SYNRCC307_RS01090	COG0493	'glutamate synthase
SYNRCC307_RS01095	COG1562	ergosterol biosynthetic process
SYNRCC307_RS01110	COG0617	tRNA 3'-terminal CCA addition
SYNRCC307_RS01120	COG1214	PFAM Peptidase M22, glycoprotease
SYNRCC307_RS01135	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
SYNRCC307_RS01140	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
SYNRCC307_RS01145	COG0416	fatty acid biosynthetic process
SYNRCC307_RS01150	COG0745	RESPONSE REGULATOR receiver
SYNRCC307_RS01155	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
SYNRCC307_RS01160	COG0457	Tetratricopeptide repeat
SYNRCC307_RS01165	COG2217	Heavy metal translocating P-type atpase
SYNRCC307_RS01170	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
SYNRCC307_RS01175	COG0470	DNA polymerase III
SYNRCC307_RS01180	COG0745	RESPONSE REGULATOR receiver
SYNRCC307_RS01190	COG1122	ATPase activity
SYNRCC307_RS01240	COG0859	PFAM glycosyl transferase family 9
SYNRCC307_RS01240	COG0457	Tetratricopeptide repeat
SYNRCC307_RS01245	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
SYNRCC307_RS01250	COG0484	heat shock protein binding
SYNRCC307_RS01260	COG1090	epimerase
SYNRCC307_RS01280	COG0316	Belongs to the HesB IscA family
SYNRCC307_RS01285	COG3349	Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'
SYNRCC307_RS01300	COG1587	Uroporphyrinogen-III synthase
SYNRCC307_RS01305	COG0463	Glycosyl transferase, family 2
SYNRCC307_RS01305	COG0457	Tetratricopeptide repeat
SYNRCC307_RS01310	COG1472	Belongs to the glycosyl hydrolase 3 family
SYNRCC307_RS01315	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
SYNRCC307_RS01330	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
SYNRCC307_RS01330	COG0517	IMP dehydrogenase activity
SYNRCC307_RS01335	COG2877	3-deoxy-8-phosphooctulonate synthase activity
SYNRCC307_RS01340	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
SYNRCC307_RS01345	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
SYNRCC307_RS01365	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
SYNRCC307_RS01395	COG1032	radical SAM domain protein
SYNRCC307_RS01410	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
SYNRCC307_RS01415	COG0434	BtpA family
SYNRCC307_RS01420	COG4243	Vitamin k epoxide reductase
SYNRCC307_RS01425	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
SYNRCC307_RS01430	COG1555	photosystem II stabilization
SYNRCC307_RS01440	COG1968	undecaprenyl-diphosphatase activity
SYNRCC307_RS01455	COG2211	Major facilitator Superfamily
SYNRCC307_RS01460	COG0483	inositol monophosphate 1-phosphatase activity
SYNRCC307_RS01465	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
SYNRCC307_RS01475	COG1193	negative regulation of DNA recombination
SYNRCC307_RS01485	COG0113	porphobilinogen synthase activity
SYNRCC307_RS01490	COG0484	heat shock protein binding
SYNRCC307_RS01565	COG0116	Belongs to the methyltransferase superfamily
SYNRCC307_RS01580	COG1196	nuclear chromosome segregation
SYNRCC307_RS01590	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
SYNRCC307_RS01605	COG0439	Biotin carboxylase
SYNRCC307_RS01620	COG0515	serine threonine protein kinase
SYNRCC307_RS01635	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
SYNRCC307_RS01640	COG4178	(ABC) transporter
SYNRCC307_RS01645	COG0537	adenosine 5'-monophosphoramidase activity
SYNRCC307_RS01660	COG0828	Belongs to the bacterial ribosomal protein bS21 family
SYNRCC307_RS01675	COG0242	peptide deformylase activity
SYNRCC307_RS01685	COG2988	succinylglutamate desuccinylase activity
SYNRCC307_RS01765	COG1570	exodeoxyribonuclease VII activity
SYNRCC307_RS01770	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
SYNRCC307_RS01795	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
SYNRCC307_RS01805	COG0488	(ABC) transporter
SYNRCC307_RS01835	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
SYNRCC307_RS01840	COG0450	alkyl hydroperoxide reductase
SYNRCC307_RS01845	COG0438	transferase activity, transferring glycosyl groups
SYNRCC307_RS01850	COG0546	phosphoglycolate phosphatase activity
SYNRCC307_RS01855	COG1252	NADH dehydrogenase
SYNRCC307_RS01860	COG0175	sulfate reduction
SYNRCC307_RS01865	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
SYNRCC307_RS01870	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
SYNRCC307_RS01890	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
SYNRCC307_RS01915	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
SYNRCC307_RS01920	COG0033	Phosphoglucomutase
SYNRCC307_RS01935	COG3394	polysaccharide catabolic process
SYNRCC307_RS01940	COG0463	Glycosyl transferase, family 2
SYNRCC307_RS01950	COG0659	secondary active sulfate transmembrane transporter activity
SYNRCC307_RS01955	COG0418	dihydroorotase activity
SYNRCC307_RS01970	COG1070	Carbohydrate kinase
SYNRCC307_RS01975	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
SYNRCC307_RS01985	COG0539	negative regulation of cytoplasmic translation
SYNRCC307_RS01990	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
SYNRCC307_RS02015	COG0589	response to stress
SYNRCC307_RS02020	COG0824	Thioesterase
SYNRCC307_RS02025	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
SYNRCC307_RS02025	COG0758	DNA mediated transformation
SYNRCC307_RS02030	COG2890	protein-(glutamine-N5) methyltransferase activity
SYNRCC307_RS02035	COG0009	L-threonylcarbamoyladenylate synthase
SYNRCC307_RS02040	COG0798	PFAM Bile acid sodium symporter
SYNRCC307_RS02050	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
SYNRCC307_RS02055	COG0640	Transcriptional regulator
SYNRCC307_RS02065	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
SYNRCC307_RS02070	COG1799	cell septum assembly
SYNRCC307_RS02090	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
SYNRCC307_RS02095	COG2894	cell division
SYNRCC307_RS02100	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
SYNRCC307_RS02115	COG0850	regulation of cytokinetic process
SYNRCC307_RS02120	COG4359	Dephosphorylates 2-hydroxy-3-keto-5-methylthiopentenyl- 1-phosphate (HK-MTPenyl-1-P) yielding 1,2-dihydroxy-3-keto-5- methylthiopentene (DHK-MTPene)
SYNRCC307_RS02125	COG1078	dGTPase activity
SYNRCC307_RS02130	COG0793	Belongs to the peptidase S41A family
SYNRCC307_RS02135	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
SYNRCC307_RS02140	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
SYNRCC307_RS02150	COG4229	Bifunctional enzyme that catalyzes the enolization of 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P) into the intermediate 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate (HK-MTPenyl-1-P), which is then dephosphorylated to form the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK- MTPene)
SYNRCC307_RS02160	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
SYNRCC307_RS02175	COG0514	ATP-dependent DNA helicase (RecQ)
SYNRCC307_RS02185	COG1012	belongs to the aldehyde dehydrogenase family
SYNRCC307_RS02200	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
SYNRCC307_RS02215	COG1791	Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway
SYNRCC307_RS02230	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
SYNRCC307_RS02245	COG1376	ErfK ybiS ycfS ynhG family protein
SYNRCC307_RS02250	COG1160	GTP binding
SYNRCC307_RS02255	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
SYNRCC307_RS02265	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
SYNRCC307_RS02270	COG1799	cell septum assembly
SYNRCC307_RS02275	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
SYNRCC307_RS02280	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
SYNRCC307_RS02295	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
SYNRCC307_RS02300	COG2211	Major facilitator Superfamily
SYNRCC307_RS02320	COG0776	regulation of translation
SYNRCC307_RS02350	COG2274	protein secretion by the type I secretion system
SYNRCC307_RS02355	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
SYNRCC307_RS02470	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
SYNRCC307_RS02560	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
SYNRCC307_RS02565	COG1218	3'(2'),5'-bisphosphate nucleotidase
SYNRCC307_RS02570	COG1185	polyribonucleotide nucleotidyltransferase activity
SYNRCC307_RS02575	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
SYNRCC307_RS02580	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
SYNRCC307_RS02585	COG0750	zinc metalloprotease
SYNRCC307_RS02590	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
SYNRCC307_RS02595	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
SYNRCC307_RS02600	COG0579	oxidoreductase
SYNRCC307_RS02610	COG0371	Dehydrogenase
SYNRCC307_RS02615	COG0481	GTPase activity
SYNRCC307_RS02660	COG0745	RESPONSE REGULATOR receiver
SYNRCC307_RS02675	COG0745	RESPONSE REGULATOR receiver
SYNRCC307_RS02705	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
SYNRCC307_RS02715	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
SYNRCC307_RS02715	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
SYNRCC307_RS02725	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
SYNRCC307_RS02730	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
SYNRCC307_RS02740	COG0107	imidazoleglycerol-phosphate synthase activity
SYNRCC307_RS02750	COG2226	methyltransferase
SYNRCC307_RS02760	COG2132	Multicopper oxidase
SYNRCC307_RS02770	COG0752	glycyl-tRNA synthetase alpha subunit
SYNRCC307_RS02800	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
SYNRCC307_RS02805	COG1270	Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
SYNRCC307_RS02810	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
SYNRCC307_RS02815	COG0740	serine-type endopeptidase activity
SYNRCC307_RS02820	COG0740	serine-type endopeptidase activity
SYNRCC307_RS02825	COG4956	integral membrane protein (PIN domain superfamily)
SYNRCC307_RS02830	COG0635	Involved in the biosynthesis of porphyrin-containing compound
SYNRCC307_RS02835	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
SYNRCC307_RS02840	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
SYNRCC307_RS02855	COG1181	Belongs to the D-alanine--D-alanine ligase family
SYNRCC307_RS02860	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
SYNRCC307_RS02865	COG4948	Mandelate Racemase Muconate Lactonizing
SYNRCC307_RS02905	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
SYNRCC307_RS02910	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
SYNRCC307_RS02925	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
SYNRCC307_RS02930	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
SYNRCC307_RS02935	COG0134	indole-3-glycerol-phosphate synthase activity
SYNRCC307_RS02960	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
SYNRCC307_RS02965	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
SYNRCC307_RS02975	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
SYNRCC307_RS02980	COG1104	cysteine desulfurase activity
SYNRCC307_RS03025	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
SYNRCC307_RS03035	COG0706	membrane insertase activity
SYNRCC307_RS03045	COG0594	ribonuclease P activity
SYNRCC307_RS03050	COG0230	Belongs to the bacterial ribosomal protein bL34 family
SYNRCC307_RS03070	COG0616	signal peptide processing
SYNRCC307_RS03075	COG0697	spore germination
SYNRCC307_RS03080	COG0438	transferase activity, transferring glycosyl groups
SYNRCC307_RS03090	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
SYNRCC307_RS03095	COG0662	Cupin 2, conserved barrel domain protein
SYNRCC307_RS03095	COG0836	Belongs to the mannose-6-phosphate isomerase type 2 family
SYNRCC307_RS03100	COG0471	metal ion transport
SYNRCC307_RS03100	COG3273	potassium ion transport
SYNRCC307_RS03110	COG1842	Phage shock protein A
SYNRCC307_RS03115	COG3118	belongs to the thioredoxin family
SYNRCC307_RS03120	COG0436	Aminotransferase
SYNRCC307_RS03135	COG0739	heme binding
SYNRCC307_RS03140	COG0577	efflux transmembrane transporter activity
SYNRCC307_RS03140	COG1136	(ABC) transporter
SYNRCC307_RS03145	COG1007	ATP synthesis coupled electron transport
SYNRCC307_RS03150	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
SYNRCC307_RS03165	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
SYNRCC307_RS03200	COG1845	cytochrome c oxidase, subunit III
SYNRCC307_RS03205	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
SYNRCC307_RS03220	COG0109	protoheme IX farnesyltransferase activity
SYNRCC307_RS03240	COG3010	Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
SYNRCC307_RS03250	COG1028	Short-chain dehydrogenase reductase Sdr
SYNRCC307_RS03265	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
SYNRCC307_RS03270	COG1619	proteins homologs of microcin C7 resistance protein MccF
SYNRCC307_RS03275	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
SYNRCC307_RS03355	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
SYNRCC307_RS03360	COG3258	Cytochrome c
SYNRCC307_RS03365	COG0723	plastoquinol--plastocyanin reductase activity
SYNRCC307_RS03375	COG0805	protein transport
SYNRCC307_RS03380	COG1293	RNA-binding protein homologous to eukaryotic snRNP
SYNRCC307_RS03385	COG0194	GDP metabolic process
SYNRCC307_RS03405	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
SYNRCC307_RS03420	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
SYNRCC307_RS03425	COG0012	GTP binding
SYNRCC307_RS03445	COG0601	transmembrane transport
SYNRCC307_RS03460	COG0460	homoserine dehydrogenase
SYNRCC307_RS03465	COG2166	iron-sulfur cluster assembly
SYNRCC307_RS03480	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
SYNRCC307_RS03485	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
SYNRCC307_RS03490	COG1239	Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX
SYNRCC307_RS03510	COG2010	Cytochrome c
SYNRCC307_RS03525	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
SYNRCC307_RS03530	COG1611	Belongs to the LOG family
SYNRCC307_RS03535	COG3118	belongs to the thioredoxin family
SYNRCC307_RS03540	COG0516	GMP reductase activity
SYNRCC307_RS03545	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
SYNRCC307_RS03555	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
SYNRCC307_RS03560	COG0644	oxidoreductase
SYNRCC307_RS03570	COG1543	Belongs to the glycosyl hydrolase 57 family
SYNRCC307_RS03575	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
SYNRCC307_RS03580	COG0395	ABC-type sugar transport system, permease component
SYNRCC307_RS03585	COG1480	7TM receptor with intracellular HD hydrolase
SYNRCC307_RS03590	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
SYNRCC307_RS03625	COG1254	Belongs to the acylphosphatase family
SYNRCC307_RS03630	COG1797	cobyrinic acid a,c-diamide synthase activity
SYNRCC307_RS03635	COG3409	Peptidoglycan-binding domain 1 protein
SYNRCC307_RS03635	COG3429	Glucose-6-phosphate dehydrogenase subunit
SYNRCC307_RS03640	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
SYNRCC307_RS03660	COG2205	protein histidine kinase activity
SYNRCC307_RS03685	COG0308	aminopeptidase N
SYNRCC307_RS03705	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
SYNRCC307_RS03720	COG1035	Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus
SYNRCC307_RS03725	COG1640	4-alpha-glucanotransferase
SYNRCC307_RS03735	COG1187	pseudouridine synthase activity
SYNRCC307_RS03740	COG5002	protein histidine kinase activity
SYNRCC307_RS03745	COG0745	RESPONSE REGULATOR receiver
SYNRCC307_RS03755	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
SYNRCC307_RS03760	COG1982	Orn Lys Arg decarboxylase major
SYNRCC307_RS03765	COG2242	protein methyltransferase activity
SYNRCC307_RS03765	COG2241	protein methyltransferase activity
SYNRCC307_RS03770	COG0575	Belongs to the CDS family
SYNRCC307_RS03785	COG0371	Dehydrogenase
SYNRCC307_RS03790	COG0542	response to heat
SYNRCC307_RS03800	COG0019	diaminopimelate decarboxylase activity
SYNRCC307_RS03810	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
SYNRCC307_RS03815	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
SYNRCC307_RS03820	COG1054	Belongs to the UPF0176 family
SYNRCC307_RS03830	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
SYNRCC307_RS03845	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
SYNRCC307_RS03850	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
SYNRCC307_RS03855	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
SYNRCC307_RS03915	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
SYNRCC307_RS03920	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
SYNRCC307_RS03935	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
SYNRCC307_RS03940	COG1850	ribulose-bisphosphate carboxylase activity
SYNRCC307_RS03945	COG4451	ribulose bisphosphate carboxylase, small
SYNRCC307_RS03970	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
SYNRCC307_RS03980	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
SYNRCC307_RS03985	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
SYNRCC307_RS04000	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
SYNRCC307_RS04005	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
SYNRCC307_RS04020	COG0456	acetyltransferase
SYNRCC307_RS04030	COG1132	(ABC) transporter
SYNRCC307_RS04035	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
SYNRCC307_RS04040	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
SYNRCC307_RS04045	COG0251	oxidation-reduction process
SYNRCC307_RS04060	COG0488	(ABC) transporter
SYNRCC307_RS04095	COG2326	polyphosphate kinase activity
SYNRCC307_RS04110	COG0028	Belongs to the TPP enzyme family
SYNRCC307_RS04115	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
SYNRCC307_RS04125	COG2226	methyltransferase
SYNRCC307_RS04140	COG0528	UMP kinase activity
SYNRCC307_RS04145	COG0233	cytoplasmic translational termination
SYNRCC307_RS04160	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
SYNRCC307_RS04165	COG0768	penicillin binding
SYNRCC307_RS04180	COG0588	phosphoglycerate mutase activity
SYNRCC307_RS04185	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
SYNRCC307_RS04210	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
SYNRCC307_RS04225	COG0442	prolyl-tRNA aminoacylation
SYNRCC307_RS04240	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
SYNRCC307_RS04245	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
SYNRCC307_RS04250	COG1324	tolerance protein
SYNRCC307_RS04275	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
SYNRCC307_RS04285	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
SYNRCC307_RS04290	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
SYNRCC307_RS04325	COG0181	hydroxymethylbilane synthase activity
SYNRCC307_RS04330	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
SYNRCC307_RS04345	COG2154	pterin-4-alpha-carbinolamine dehydratase
SYNRCC307_RS04375	COG0542	response to heat
SYNRCC307_RS04420	COG2010	Cytochrome c
SYNRCC307_RS04430	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
SYNRCC307_RS04435	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
SYNRCC307_RS04465	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
SYNRCC307_RS04470	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
SYNRCC307_RS04525	COG1119	ATPase activity
SYNRCC307_RS04530	COG0011	TIGRFAM Protein of
SYNRCC307_RS04535	COG0339	signal peptide processing
SYNRCC307_RS04540	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
SYNRCC307_RS04545	COG0083	homoserine kinase activity
SYNRCC307_RS04550	COG0837	glucose binding
SYNRCC307_RS04555	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
SYNRCC307_RS04585	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
SYNRCC307_RS04600	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
SYNRCC307_RS04660	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
SYNRCC307_RS04675	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
SYNRCC307_RS04680	COG1429	ligase activity, forming nitrogen-metal bonds
SYNRCC307_RS04685	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
SYNRCC307_RS04695	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
SYNRCC307_RS04700	COG0149	triose-phosphate isomerase activity
SYNRCC307_RS04710	COG1132	(ABC) transporter
SYNRCC307_RS04720	COG1115	amino acid carrier protein
SYNRCC307_RS04730	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
SYNRCC307_RS04765	COG1970	mechanosensitive ion channel activity
SYNRCC307_RS04785	COG0673	inositol 2-dehydrogenase activity
SYNRCC307_RS04795	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
SYNRCC307_RS04800	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
SYNRCC307_RS04810	COG3954	Phosphoribulokinase
SYNRCC307_RS04815	COG0473	3-isopropylmalate dehydrogenase activity
SYNRCC307_RS04820	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
SYNRCC307_RS04825	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
SYNRCC307_RS04840	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
SYNRCC307_RS04870	COG2197	response regulator
SYNRCC307_RS04880	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
SYNRCC307_RS04890	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
SYNRCC307_RS04915	COG1201	RNA secondary structure unwinding
SYNRCC307_RS04920	COG1793	dna ligase
SYNRCC307_RS04945	COG0598	Magnesium transport protein CorA
SYNRCC307_RS05025	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
SYNRCC307_RS05040	COG0659	secondary active sulfate transmembrane transporter activity
SYNRCC307_RS05045	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
SYNRCC307_RS05045	COG0426	domain, Protein
SYNRCC307_RS05055	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
SYNRCC307_RS05145	COG0724	RNA recognition motif
SYNRCC307_RS05230	COG2124	cytochrome p450
SYNRCC307_RS05255	COG2509	5-formyltetrahydrofolate cyclo-ligase activity
SYNRCC307_RS05285	COG5002	protein histidine kinase activity
SYNRCC307_RS05305	COG0367	asparagine synthase
SYNRCC307_RS05310	COG0540	Belongs to the ATCase OTCase family
SYNRCC307_RS05330	COG1773	rubredoxin
SYNRCC307_RS05380	COG0681	Belongs to the peptidase S26 family
SYNRCC307_RS05385	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
SYNRCC307_RS05390	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
SYNRCC307_RS05400	COG1376	ErfK ybiS ycfS ynhG family protein
SYNRCC307_RS05405	COG0297	glycogen (starch) synthase activity
SYNRCC307_RS05415	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
SYNRCC307_RS05420	COG0668	transmembrane transport
SYNRCC307_RS05425	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
SYNRCC307_RS05435	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
SYNRCC307_RS05455	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
SYNRCC307_RS05460	COG2045	Belongs to the ComB family
SYNRCC307_RS05475	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
SYNRCC307_RS05480	COG0142	geranyltranstransferase activity
SYNRCC307_RS05555	COG4106	trans-aconitate 2-methyltransferase activity
SYNRCC307_RS05560	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
SYNRCC307_RS05580	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
SYNRCC307_RS05610	COG0415	Belongs to the DNA photolyase family
SYNRCC307_RS05625	COG0495	leucyl-tRNA aminoacylation
SYNRCC307_RS05635	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
SYNRCC307_RS05640	COG1104	cysteine desulfurase activity
SYNRCC307_RS05665	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
SYNRCC307_RS05670	COG0322	excinuclease ABC activity
SYNRCC307_RS05685	COG2197	response regulator
SYNRCC307_RS05690	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
SYNRCC307_RS05695	COG3046	protein related to deoxyribodipyrimidine photolyase
SYNRCC307_RS05700	COG1981	membrane
SYNRCC307_RS05705	COG0587	DNA-directed DNA polymerase activity
SYNRCC307_RS05720	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
SYNRCC307_RS05725	COG1410	methionine synthase
SYNRCC307_RS05725	COG0646	methionine synthase
SYNRCC307_RS05750	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
SYNRCC307_RS05755	COG0384	phenazine biosynthesis protein PhzF
SYNRCC307_RS05790	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
SYNRCC307_RS05795	COG0072	phenylalanine-tRNA ligase activity
SYNRCC307_RS05795	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
SYNRCC307_RS05800	COG0267	Belongs to the bacterial ribosomal protein bL33 family
SYNRCC307_RS05805	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
SYNRCC307_RS05810	COG4776	Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction
SYNRCC307_RS05820	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
SYNRCC307_RS05855	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
SYNRCC307_RS05860	COG0739	heme binding
SYNRCC307_RS05875	COG0450	alkyl hydroperoxide reductase
SYNRCC307_RS05880	COG1619	proteins homologs of microcin C7 resistance protein MccF
SYNRCC307_RS05885	COG0047	phosphoribosylformylglycinamidine synthase activity
SYNRCC307_RS05915	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
SYNRCC307_RS05925	COG0129	dihydroxy-acid dehydratase activity
SYNRCC307_RS05940	COG0363	glucosamine-6-phosphate deaminase activity
SYNRCC307_RS05945	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
SYNRCC307_RS05950	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
SYNRCC307_RS05955	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
SYNRCC307_RS05960	COG1494	fructose-1,6-bisphosphatase
SYNRCC307_RS05965	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
SYNRCC307_RS05970	COG0459	protein refolding
SYNRCC307_RS05980	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
SYNRCC307_RS05990	COG1137	ATPase activity
SYNRCC307_RS06005	COG1217	gtp-binding protein TYPA
SYNRCC307_RS06015	COG0644	oxidoreductase
SYNRCC307_RS06020	COG0751	glycine-tRNA ligase activity
SYNRCC307_RS06025	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
SYNRCC307_RS06030	COG2173	Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
SYNRCC307_RS06035	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
SYNRCC307_RS06045	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
SYNRCC307_RS06050	COG0052	Belongs to the universal ribosomal protein uS2 family
SYNRCC307_RS06055	COG1216	Glycosyl transferase, family 2
SYNRCC307_RS06075	COG0811	peptide transport
SYNRCC307_RS06080	COG1136	(ABC) transporter
SYNRCC307_RS06120	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
SYNRCC307_RS06125	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
SYNRCC307_RS06135	COG0076	glutamate decarboxylase activity
SYNRCC307_RS06145	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
SYNRCC307_RS06155	COG0174	glutamine synthetase
SYNRCC307_RS06185	COG0515	serine threonine protein kinase
SYNRCC307_RS06190	COG2603	Catalyzes the transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA
SYNRCC307_RS06195	COG3310	Protein conserved in bacteria
SYNRCC307_RS06200	COG0628	permease
SYNRCC307_RS06225	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
SYNRCC307_RS06230	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
SYNRCC307_RS06235	COG0022	dehydrogenase e1 component
SYNRCC307_RS06235	COG0508	dehydrogenase complex catalyzes the overall conversion of
SYNRCC307_RS06245	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
SYNRCC307_RS06250	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
SYNRCC307_RS06255	COG0792	nuclease activity
SYNRCC307_RS06270	COG0358	DNA primase activity
SYNRCC307_RS06285	COG0632	four-way junction helicase activity
SYNRCC307_RS06290	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
SYNRCC307_RS06300	COG0587	DNA-directed DNA polymerase activity
SYNRCC307_RS06305	COG0154	amidase activity
SYNRCC307_RS06315	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
SYNRCC307_RS06320	COG1939	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
SYNRCC307_RS06330	COG0505	Belongs to the CarA family
SYNRCC307_RS06335	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
SYNRCC307_RS06345	COG1132	(ABC) transporter
SYNRCC307_RS06355	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
SYNRCC307_RS06375	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
SYNRCC307_RS06385	COG2176	DNA-directed DNA polymerase activity
SYNRCC307_RS06390	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
SYNRCC307_RS06400	COG0530	calcium, potassium:sodium antiporter activity
SYNRCC307_RS06405	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
SYNRCC307_RS06410	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
SYNRCC307_RS06415	COG0166	Belongs to the GPI family
SYNRCC307_RS06440	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
SYNRCC307_RS06445	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
SYNRCC307_RS06450	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
SYNRCC307_RS06450	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
SYNRCC307_RS06455	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
SYNRCC307_RS06460	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
SYNRCC307_RS06465	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
SYNRCC307_RS06475	COG0484	heat shock protein binding
SYNRCC307_RS06480	COG0443	Heat shock 70 kDa protein
SYNRCC307_RS06485	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
SYNRCC307_RS06490	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
SYNRCC307_RS06495	COG0573	inorganic phosphate transmembrane transporter activity
SYNRCC307_RS06500	COG0581	inorganic phosphate transmembrane transporter activity
SYNRCC307_RS06505	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
SYNRCC307_RS06510	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
SYNRCC307_RS06520	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
SYNRCC307_RS06525	COG0483	inositol monophosphate 1-phosphatase activity
SYNRCC307_RS06530	COG3705	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
SYNRCC307_RS06540	COG0326	Molecular chaperone. Has ATPase activity
SYNRCC307_RS06550	COG0380	Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor
SYNRCC307_RS06555	COG1653	transport
SYNRCC307_RS06570	COG3842	ATPase activity
SYNRCC307_RS06585	COG0366	Alpha amylase catalytic
SYNRCC307_RS06590	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
SYNRCC307_RS06595	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
SYNRCC307_RS06600	COG0227	Belongs to the bacterial ribosomal protein bL28 family
SYNRCC307_RS06605	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
SYNRCC307_RS06635	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
SYNRCC307_RS06640	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
SYNRCC307_RS06675	COG0469	pyruvate kinase activity
SYNRCC307_RS06680	COG0577	efflux transmembrane transporter activity
SYNRCC307_RS06680	COG1136	(ABC) transporter
SYNRCC307_RS06690	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
SYNRCC307_RS06700	COG0740	serine-type endopeptidase activity
SYNRCC307_RS06720	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
SYNRCC307_RS06760	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
SYNRCC307_RS06765	COG1175	transmembrane transport
SYNRCC307_RS06770	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
SYNRCC307_RS06775	COG2226	methyltransferase
SYNRCC307_RS06785	COG1942	4-Oxalocrotonate Tautomerase
SYNRCC307_RS06835	COG2197	response regulator
SYNRCC307_RS06840	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
SYNRCC307_RS06860	COG0475	glutathione-regulated potassium exporter activity
SYNRCC307_RS06895	COG0180	Tryptophanyl-tRNA synthetase
SYNRCC307_RS06905	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
SYNRCC307_RS06910	COG1122	ATPase activity
SYNRCC307_RS06935	COG1836	PFAM Integral membrane protein DUF92
SYNRCC307_RS06940	COG1191	sigma factor activity
SYNRCC307_RS06945	COG3639	organic phosphonate transmembrane transporter activity
SYNRCC307_RS06950	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
SYNRCC307_RS06955	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
SYNRCC307_RS06960	COG0436	Aminotransferase
SYNRCC307_RS06970	COG1573	uracil-dna glycosylase
SYNRCC307_RS06980	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
SYNRCC307_RS06985	COG0793	Belongs to the peptidase S41A family
SYNRCC307_RS06995	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
SYNRCC307_RS07020	COG0861	Integral membrane protein TerC family
SYNRCC307_RS07030	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
SYNRCC307_RS07040	COG0312	modulator of DNA gyrase
SYNRCC307_RS07045	COG1633	Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME)
SYNRCC307_RS07060	COG0163	prenyltransferase activity
SYNRCC307_RS07065	COG0557	exoribonuclease II activity
SYNRCC307_RS07075	COG2119	membrane
SYNRCC307_RS07095	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
SYNRCC307_RS07095	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
SYNRCC307_RS07100	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
SYNRCC307_RS07110	COG0333	Belongs to the bacterial ribosomal protein bL32 family
SYNRCC307_RS07115	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
SYNRCC307_RS07120	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
SYNRCC307_RS07125	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
SYNRCC307_RS07135	COG0191	fructose-bisphosphate aldolase activity
SYNRCC307_RS07150	COG0435	Glutathione S-transferase
SYNRCC307_RS07175	COG0432	Pfam Uncharacterised protein family UPF0047
SYNRCC307_RS07205	COG0477	Major facilitator Superfamily
SYNRCC307_RS07215	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
SYNRCC307_RS07255	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
SYNRCC307_RS07350	COG1206	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
SYNRCC307_RS07355	COG1233	COG1233 Phytoene dehydrogenase and related
SYNRCC307_RS07360	COG2095	MarC family integral membrane protein
SYNRCC307_RS07365	COG0076	glutamate decarboxylase activity
SYNRCC307_RS07390	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
SYNRCC307_RS07405	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
SYNRCC307_RS07415	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
SYNRCC307_RS07420	COG1074	ATP-dependent DNA helicase activity
SYNRCC307_RS07425	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
SYNRCC307_RS07440	COG0513	Belongs to the DEAD box helicase family
SYNRCC307_RS07455	COG1316	TRANSCRIPTIONal
SYNRCC307_RS07460	COG2710	Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein
SYNRCC307_RS07465	COG2710	Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein
SYNRCC307_RS07470	COG1348	The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex which has 2 components the iron protein and the molybdenum-iron protein
SYNRCC307_RS07485	COG1741	Belongs to the pirin family
SYNRCC307_RS07490	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
SYNRCC307_RS07495	COG0569	domain protein
SYNRCC307_RS07515	COG0704	Plays a role in the regulation of phosphate uptake
SYNRCC307_RS07530	COG0095	Lipoate-protein ligase
SYNRCC307_RS07535	COG1994	Peptidase M50
SYNRCC307_RS07535	COG0517	IMP dehydrogenase activity
SYNRCC307_RS07540	COG0135	phosphoribosylanthranilate isomerase activity
SYNRCC307_RS07550	COG0302	gtp cyclohydrolase
SYNRCC307_RS07555	COG0300	oxidoreductase activity
SYNRCC307_RS07565	COG5322	oxidoreductase activity
SYNRCC307_RS07570	COG3396	Phenylacetate-CoA oxygenase
SYNRCC307_RS07580	COG0539	negative regulation of cytoplasmic translation
SYNRCC307_RS07590	COG1496	oxidoreductase activity
SYNRCC307_RS07630	COG2010	Cytochrome c
SYNRCC307_RS07640	COG0159	tryptophan synthase activity
SYNRCC307_RS07690	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
SYNRCC307_RS07700	COG1108	ABC-type Mn2 Zn2 transport systems permease components
SYNRCC307_RS07705	COG1121	(ABC) transporter
SYNRCC307_RS07710	COG0803	Belongs to the bacterial solute-binding protein 9 family
SYNRCC307_RS07715	COG0701	Predicted permease
SYNRCC307_RS07730	COG0140	phosphoribosyl-ATP diphosphatase activity
SYNRCC307_RS07730	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
SYNRCC307_RS07735	COG0720	synthase
SYNRCC307_RS07740	COG0735	belongs to the Fur family
SYNRCC307_RS07770	COG0789	Transcriptional regulator
SYNRCC307_RS07775	COG0523	cobalamin synthesis protein
SYNRCC307_RS07785	COG1840	ABC-type Fe3 transport system, periplasmic component
SYNRCC307_RS07790	COG1840	ABC-type Fe3 transport system, periplasmic component
SYNRCC307_RS07810	COG0735	belongs to the Fur family
SYNRCC307_RS07820	COG1641	Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2 ), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor- dependent enzymes
SYNRCC307_RS07850	COG0277	FAD linked oxidase domain protein
SYNRCC307_RS07855	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
SYNRCC307_RS07860	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
SYNRCC307_RS07875	COG0405	Gamma-glutamyltransferase
SYNRCC307_RS07895	COG1666	GTP binding
SYNRCC307_RS07910	COG0857	belongs to the CobB CobQ family
SYNRCC307_RS07915	COG0300	oxidoreductase activity
SYNRCC307_RS07915	COG3000	fatty acid hydroxylase
SYNRCC307_RS07920	COG0024	Methionine aminopeptidase
SYNRCC307_RS07930	COG0335	large ribosomal subunit rRNA binding
SYNRCC307_RS07950	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
SYNRCC307_RS07955	COG0025	NhaP-type Na H and K H
SYNRCC307_RS07965	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
SYNRCC307_RS07965	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
SYNRCC307_RS07970	COG0215	cysteine-tRNA ligase activity
SYNRCC307_RS07980	COG0733	neurotransmitter:sodium symporter activity
SYNRCC307_RS07985	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
SYNRCC307_RS08025	COG0492	ferredoxin-NADP+ reductase activity
SYNRCC307_RS08030	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
SYNRCC307_RS08040	COG1187	pseudouridine synthase activity
SYNRCC307_RS08065	COG0596	Alpha beta hydrolase
SYNRCC307_RS08070	COG0440	acetolactate synthase activity
SYNRCC307_RS08075	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
SYNRCC307_RS08100	COG0424	maF-like protein
SYNRCC307_RS08110	COG1492	cobalamin metabolic process
SYNRCC307_RS08125	COG0482	sulfurtransferase activity
SYNRCC307_RS08130	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
SYNRCC307_RS08130	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
SYNRCC307_RS08135	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
SYNRCC307_RS08140	COG0123	including yeast histone deacetylase and acetoin utilization protein
SYNRCC307_RS08145	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
SYNRCC307_RS08155	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
SYNRCC307_RS08160	COG0228	four-way junction DNA binding
SYNRCC307_RS08165	COG1702	phosphate starvation-inducible protein PhoH
SYNRCC307_RS08200	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
SYNRCC307_RS08215	COG0457	Tetratricopeptide repeat
SYNRCC307_RS08245	COG0336	Belongs to the RNA methyltransferase TrmD family
SYNRCC307_RS08250	COG0330	HflC and HflK could
SYNRCC307_RS08260	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
SYNRCC307_RS08275	COG1691	(AIR) carboxylase
SYNRCC307_RS08295	COG0352	thiamine-phosphate diphosphorylase activity
SYNRCC307_RS08300	COG0196	riboflavin kinase activity
SYNRCC307_RS08310	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
SYNRCC307_RS08315	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
SYNRCC307_RS08320	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
SYNRCC307_RS08325	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
SYNRCC307_RS08330	COG0745	RESPONSE REGULATOR receiver
SYNRCC307_RS08360	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
SYNRCC307_RS08360	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
SYNRCC307_RS08375	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
SYNRCC307_RS08380	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
SYNRCC307_RS08385	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
SYNRCC307_RS08395	COG3239	Fatty acid desaturase
SYNRCC307_RS08405	COG1028	Short-chain dehydrogenase reductase Sdr
SYNRCC307_RS08480	COG2105	PFAM AIG2 family protein
SYNRCC307_RS08505	COG0815	Transfers the fatty acyl group on membrane lipoproteins
SYNRCC307_RS08510	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
SYNRCC307_RS08525	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
SYNRCC307_RS08530	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
SYNRCC307_RS08535	COG0531	amino acid
SYNRCC307_RS08550	COG1022	Amp-dependent synthetase and ligase
SYNRCC307_RS08555	COG0321	lipoyl(octanoyl) transferase activity
SYNRCC307_RS08560	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
SYNRCC307_RS08565	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
SYNRCC307_RS08580	COG0438	transferase activity, transferring glycosyl groups
SYNRCC307_RS08585	COG0284	orotidine-5'-phosphate decarboxylase activity
SYNRCC307_RS08595	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
SYNRCC307_RS08615	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
SYNRCC307_RS08625	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
SYNRCC307_RS08640	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
SYNRCC307_RS08645	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
SYNRCC307_RS08650	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
SYNRCC307_RS08655	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
SYNRCC307_RS08660	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
SYNRCC307_RS08670	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
SYNRCC307_RS08680	COG0151	Belongs to the GarS family
SYNRCC307_RS08685	COG5002	protein histidine kinase activity
SYNRCC307_RS08690	COG0467	Core component of the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. Binds to DNA. The KaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction
SYNRCC307_RS08695	COG4251	negative regulation of phosphorylation
SYNRCC307_RS08705	COG0261	This protein binds to 23S rRNA in the presence of protein L20
SYNRCC307_RS08710	COG0211	Belongs to the bacterial ribosomal protein bL27 family
SYNRCC307_RS08725	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
SYNRCC307_RS08735	COG0217	transcriptional regulatory protein
SYNRCC307_RS08745	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
SYNRCC307_RS08755	COG0363	glucosamine-6-phosphate deaminase activity
SYNRCC307_RS08760	COG2385	sporulation resulting in formation of a cellular spore
SYNRCC307_RS08765	COG1234	tRNA 3'-trailer cleavage
SYNRCC307_RS08770	COG2010	Cytochrome c
SYNRCC307_RS08785	COG2264	protein methyltransferase activity
SYNRCC307_RS08790	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
SYNRCC307_RS08810	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
SYNRCC307_RS08840	COG1077	Cell shape determining protein MreB Mrl
SYNRCC307_RS08855	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
SYNRCC307_RS08870	COG0459	protein refolding
SYNRCC307_RS08875	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
SYNRCC307_RS08880	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
SYNRCC307_RS08885	COG0355	proton-transporting ATP synthase activity, rotational mechanism
SYNRCC307_RS08900	COG0387	Pfam Sodium calcium exchanger
SYNRCC307_RS08905	COG0006	proline dipeptidase activity
SYNRCC307_RS08910	COG1253	flavin adenine dinucleotide binding
SYNRCC307_RS08915	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
SYNRCC307_RS08920	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
SYNRCC307_RS08925	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
SYNRCC307_RS08925	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
SYNRCC307_RS08940	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
SYNRCC307_RS08945	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
SYNRCC307_RS08955	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
SYNRCC307_RS08960	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
SYNRCC307_RS08965	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
SYNRCC307_RS08970	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
SYNRCC307_RS08975	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
SYNRCC307_RS08980	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
SYNRCC307_RS08985	COG0356	it plays a direct role in the translocation of protons across the membrane
SYNRCC307_RS08995	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
SYNRCC307_RS09000	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
SYNRCC307_RS09020	COG0772	Belongs to the SEDS family
SYNRCC307_RS09035	COG1333	cytochrome c biogenesis protein
SYNRCC307_RS09040	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
SYNRCC307_RS09045	COG0347	Belongs to the P(II) protein family
SYNRCC307_RS09060	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
SYNRCC307_RS09135	COG4581	dead DEAH box helicase
SYNRCC307_RS09140	COG0156	8-amino-7-oxononanoate synthase activity
SYNRCC307_RS09150	COG4106	trans-aconitate 2-methyltransferase activity
SYNRCC307_RS09150	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
SYNRCC307_RS09155	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
SYNRCC307_RS09200	COG2010	Cytochrome c
SYNRCC307_RS09200	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
SYNRCC307_RS09215	COG0114	fumarate hydratase activity
SYNRCC307_RS09220	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
SYNRCC307_RS09245	COG0484	heat shock protein binding
SYNRCC307_RS09250	COG0357	Ribosomal RNA small subunit methyltransferase G
SYNRCC307_RS09280	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
SYNRCC307_RS09285	COG0820	rRNA (adenine-C2-)-methyltransferase activity
SYNRCC307_RS09295	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
SYNRCC307_RS09300	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
SYNRCC307_RS09310	COG0084	hydrolase, TatD family'
SYNRCC307_RS09315	COG0268	Binds directly to 16S ribosomal RNA
SYNRCC307_RS09320	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
SYNRCC307_RS09330	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
SYNRCC307_RS09335	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
SYNRCC307_RS09345	COG0779	Required for maturation of 30S ribosomal subunits
SYNRCC307_RS09350	COG0195	Participates in both transcription termination and antitermination
SYNRCC307_RS09360	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
SYNRCC307_RS09430	COG1012	belongs to the aldehyde dehydrogenase family
SYNRCC307_RS09445	COG3631	Ketosteroid isomerase-related protein
SYNRCC307_RS09475	COG0463	Glycosyl transferase, family 2
SYNRCC307_RS09480	COG0366	Alpha amylase catalytic
SYNRCC307_RS09485	COG3769	mannosylglycerate metabolic process
SYNRCC307_RS09510	COG0235	Class ii aldolase
SYNRCC307_RS09520	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
SYNRCC307_RS09535	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
SYNRCC307_RS09540	COG0719	Fe-S assembly protein
SYNRCC307_RS09545	COG0396	ATPase activity
SYNRCC307_RS09550	COG0719	Fe-S assembly protein
SYNRCC307_RS09555	COG4802	Ferredoxin thioredoxin reductase catalytic beta chain
SYNRCC307_RS09560	COG1830	Aldolase
SYNRCC307_RS09585	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
SYNRCC307_RS09605	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
SYNRCC307_RS09650	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
SYNRCC307_RS09790	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
SYNRCC307_RS09795	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
SYNRCC307_RS09795	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
SYNRCC307_RS09800	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
SYNRCC307_RS09805	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
SYNRCC307_RS09850	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
SYNRCC307_RS09870	COG0408	coproporphyrinogen oxidase activity
SYNRCC307_RS09875	COG0489	protein tyrosine kinase activity
SYNRCC307_RS09880	COG0772	Belongs to the SEDS family
SYNRCC307_RS09895	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
SYNRCC307_RS09900	COG2170	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
SYNRCC307_RS09905	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
SYNRCC307_RS09920	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
SYNRCC307_RS09930	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
SYNRCC307_RS09935	COG1606	tRNA processing
SYNRCC307_RS09950	COG2109	Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids
SYNRCC307_RS09965	COG2274	protein secretion by the type I secretion system
SYNRCC307_RS09985	COG3001	Fructosamine kinase
SYNRCC307_RS09995	COG0287	Prephenate dehydrogenase
SYNRCC307_RS10015	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
SYNRCC307_RS10030	COG3854	ATPases associated with a variety of cellular activities
SYNRCC307_RS10045	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
SYNRCC307_RS10050	COG0088	Forms part of the polypeptide exit tunnel
SYNRCC307_RS10055	COG0089	rRNA binding
SYNRCC307_RS10060	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
SYNRCC307_RS10065	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
SYNRCC307_RS10070	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
SYNRCC307_RS10075	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
SYNRCC307_RS10080	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
SYNRCC307_RS10085	COG0255	Belongs to the universal ribosomal protein uL29 family
SYNRCC307_RS10090	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
SYNRCC307_RS10095	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
SYNRCC307_RS10100	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
SYNRCC307_RS10105	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
SYNRCC307_RS10110	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
SYNRCC307_RS10115	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
SYNRCC307_RS10120	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
SYNRCC307_RS10125	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
SYNRCC307_RS10130	COG0200	Binds to the 23S rRNA
SYNRCC307_RS10135	COG0201	protein transport
SYNRCC307_RS10140	COG0563	adenylate kinase activity
SYNRCC307_RS10145	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
SYNRCC307_RS10150	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
SYNRCC307_RS10155	COG0202	RNA polymerase activity
SYNRCC307_RS10160	COG0203	ribosomal protein L17
SYNRCC307_RS10165	COG0101	tRNA pseudouridine synthase activity
SYNRCC307_RS10170	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
SYNRCC307_RS10175	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
SYNRCC307_RS10180	COG0254	rRNA binding
SYNRCC307_RS10185	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
SYNRCC307_RS10195	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
SYNRCC307_RS10215	COG0791	NLP P60 protein
SYNRCC307_RS10220	COG0463	Glycosyl transferase, family 2
SYNRCC307_RS10250	COG2885	chlorophyll binding
SYNRCC307_RS10255	COG2885	chlorophyll binding
SYNRCC307_RS10280	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
SYNRCC307_RS10285	COG0659	secondary active sulfate transmembrane transporter activity
SYNRCC307_RS10290	COG0067	glutamate synthase
SYNRCC307_RS10290	COG0070	glutamate synthase
SYNRCC307_RS10290	COG0069	glutamate synthase activity
SYNRCC307_RS10305	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
SYNRCC307_RS10310	COG0049	tRNA binding
SYNRCC307_RS10315	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
SYNRCC307_RS10320	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
SYNRCC307_RS10325	COG0051	transcription antitermination factor activity, RNA binding
SYNRCC307_RS10335	COG2226	methyltransferase
SYNRCC307_RS10340	COG0077	Prephenate dehydratase
SYNRCC307_RS10350	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
SYNRCC307_RS10355	COG1530	ribonuclease E activity
SYNRCC307_RS10360	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
SYNRCC307_RS10365	COG0436	Aminotransferase
SYNRCC307_RS10370	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
SYNRCC307_RS10405	COG1121	(ABC) transporter
SYNRCC307_RS10410	COG1108	ABC-type Mn2 Zn2 transport systems permease components
SYNRCC307_RS10415	COG3386	PFAM SMP-30 Gluconolaconase
SYNRCC307_RS10420	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
SYNRCC307_RS10435	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
SYNRCC307_RS10440	COG2046	Belongs to the sulfate adenylyltransferase family
SYNRCC307_RS10440	COG0529	Catalyzes the synthesis of activated sulfate
SYNRCC307_RS10455	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
SYNRCC307_RS10460	COG3536	Protein conserved in bacteria
SYNRCC307_RS10495	COG0540	Belongs to the ATCase OTCase family
SYNRCC307_RS10500	COG2094	Belongs to the DNA glycosylase MPG family
SYNRCC307_RS10510	COG1402	creatininase
SYNRCC307_RS10515	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
SYNRCC307_RS10540	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
SYNRCC307_RS10560	COG0220	tRNA (guanine-N7-)-methyltransferase activity
SYNRCC307_RS10575	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
SYNRCC307_RS10585	COG0741	lytic transglycosylase activity
SYNRCC307_RS10600	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
SYNRCC307_RS10605	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
SYNRCC307_RS10625	COG0126	phosphoglycerate kinase activity
SYNRCC307_RS10630	COG0589	response to stress
SYNRCC307_RS10635	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
SYNRCC307_RS10640	COG0564	pseudouridine synthase activity
SYNRCC307_RS10655	COG4172	Belongs to the ABC transporter superfamily
SYNRCC307_RS10660	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
SYNRCC307_RS10675	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
SYNRCC307_RS10685	COG0157	Belongs to the NadC ModD family
SYNRCC307_RS10690	COG0018	arginyl-trna synthetase
SYNRCC307_RS10695	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
SYNRCC307_RS10710	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
SYNRCC307_RS10715	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
SYNRCC307_RS10720	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
SYNRCC307_RS10725	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
SYNRCC307_RS10730	COG0189	ligase activity
SYNRCC307_RS10740	COG1575	Belongs to the MenA family. Type 1 subfamily
SYNRCC307_RS10755	COG0824	Thioesterase
SYNRCC307_RS10760	COG0649	NAD binding
SYNRCC307_RS10765	COG0275	rRNA processing
SYNRCC307_RS10770	COG1104	cysteine desulfurase activity
SYNRCC307_RS10780	COG0745	RESPONSE REGULATOR receiver
SYNRCC307_RS10785	COG0564	pseudouridine synthase activity
SYNRCC307_RS10790	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
SYNRCC307_RS10795	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
SYNRCC307_RS10800	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
SYNRCC307_RS10805	COG0628	permease
SYNRCC307_RS10810	COG0529	Catalyzes the synthesis of activated sulfate
SYNRCC307_RS10815	COG0023	Translation Initiation Factor
SYNRCC307_RS10830	COG0133	tryptophan synthase activity
SYNRCC307_RS10835	COG1420	regulation of RNA biosynthetic process
SYNRCC307_RS10850	COG2062	phosphohistidine phosphatase, SixA
SYNRCC307_RS10855	COG0372	Belongs to the citrate synthase family
SYNRCC307_RS10860	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
SYNRCC307_RS10865	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
SYNRCC307_RS10870	COG0839	Belongs to the complex I subunit 6 family
SYNRCC307_RS10880	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
SYNRCC307_RS10915	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
SYNRCC307_RS10920	COG0131	Imidazoleglycerol-phosphate dehydratase
SYNRCC307_RS10930	COG3670	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
SYNRCC307_RS10935	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
SYNRCC307_RS10955	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
SYNRCC307_RS10960	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
SYNRCC307_RS10980	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
SYNRCC307_RS10990	COG0625	glutathione transferase activity
SYNRCC307_RS10995	COG1253	flavin adenine dinucleotide binding
SYNRCC307_RS11000	COG0673	inositol 2-dehydrogenase activity
SYNRCC307_RS11015	COG0343	queuine tRNA-ribosyltransferase activity
SYNRCC307_RS11025	COG2205	protein histidine kinase activity
SYNRCC307_RS11040	COG0138	bifunctional purine biosynthesis protein purh
SYNRCC307_RS11055	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
SYNRCC307_RS11060	COG0004	ammonium transporteR
SYNRCC307_RS11075	COG1489	DNA binding
SYNRCC307_RS11080	COG0728	peptidoglycan biosynthetic process
SYNRCC307_RS11105	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
SYNRCC307_RS11110	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
SYNRCC307_RS11115	COG1058	Belongs to the CinA family
SYNRCC307_RS11115	COG1546	Belongs to the CinA family
SYNRCC307_RS11120	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
SYNRCC307_RS11125	COG0066	3-isopropylmalate dehydratase activity
SYNRCC307_RS11160	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
SYNRCC307_RS11180	COG4372	Transposase
SYNRCC307_RS11185	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
SYNRCC307_RS11195	COG0717	Belongs to the dCTP deaminase family
SYNRCC307_RS11205	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
SYNRCC307_RS11230	COG0167	dihydroorotate dehydrogenase activity
SYNRCC307_RS11235	COG0328	RNA-DNA hybrid ribonuclease activity
SYNRCC307_RS11240	COG0222	ribosome binding
SYNRCC307_RS11245	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
SYNRCC307_RS11250	COG0081	regulation of translation
SYNRCC307_RS11255	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
SYNRCC307_RS11260	COG0250	Participates in transcription elongation, termination and antitermination
SYNRCC307_RS11265	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
SYNRCC307_RS11270	COG0542	response to heat
SYNRCC307_RS11275	COG0346	lactoylglutathione lyase activity
SYNRCC307_RS11280	COG0148	phosphopyruvate hydratase activity
SYNRCC307_RS11285	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
SYNRCC307_RS11325	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
SYNRCC307_RS11330	COG0237	dephospho-CoA kinase activity
SYNRCC307_RS11335	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
SYNRCC307_RS11340	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
SYNRCC307_RS11340	COG2022	thiamine diphosphate biosynthetic process
SYNRCC307_RS11345	COG0105	UTP biosynthetic process
SYNRCC307_RS11350	COG1166	arginine decarboxylase activity
SYNRCC307_RS11360	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
SYNRCC307_RS11365	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
SYNRCC307_RS11380	COG0071	Belongs to the small heat shock protein (HSP20) family
SYNRCC307_RS11390	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
SYNRCC307_RS11390	COG0426	domain, Protein
SYNRCC307_RS11395	COG0426	domain, Protein
SYNRCC307_RS11395	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
SYNRCC307_RS11410	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
SYNRCC307_RS11410	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
SYNRCC307_RS11415	COG0509	glycine decarboxylation via glycine cleavage system
SYNRCC307_RS11420	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
SYNRCC307_RS11440	COG0359	binds to the 23S rRNA
SYNRCC307_RS11445	COG1372	Participates in initiation and elongation during chromosome replication
SYNRCC307_RS11445	COG0305	Participates in initiation and elongation during chromosome replication
SYNRCC307_RS11445	COG0305	Participates in initiation and elongation during chromosome replication
SYNRCC307_RS11445	COG1372	Participates in initiation and elongation during chromosome replication
SYNRCC307_RS11455	COG0445	tRNA wobble uridine modification
SYNRCC307_RS11505	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
SYNRCC307_RS11515	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
SYNRCC307_RS11520	COG0745	RESPONSE REGULATOR receiver
SYNRCC307_RS11525	COG0398	Pfam SNARE associated Golgi protein
SYNRCC307_RS11530	COG0668	transmembrane transport
SYNRCC307_RS11535	COG0525	valine-tRNA ligase activity
SYNRCC307_RS11590	COG0662	Cupin 2, conserved barrel domain protein
SYNRCC307_RS11610	COG3956	TIGRFAM MazG family protein
SYNRCC307_RS11615	COG0288	reversible hydration of carbon dioxide
SYNRCC307_RS11620	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
SYNRCC307_RS11625	COG0010	Belongs to the arginase family
SYNRCC307_RS11635	COG0404	The glycine cleavage system catalyzes the degradation of glycine
SYNRCC307_RS11640	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
SYNRCC307_RS11645	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
SYNRCC307_RS11650	COG0783	Belongs to the Dps family
SYNRCC307_RS11660	COG0504	CTP synthase activity
SYNRCC307_RS11665	COG0602	queuosine metabolic process
SYNRCC307_RS11670	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
SYNRCC307_RS11720	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
SYNRCC307_RS11730	COG0830	nickel cation binding
SYNRCC307_RS11735	COG2371	Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly
SYNRCC307_RS11740	COG0829	nickel cation binding
SYNRCC307_RS11750	COG0831	urea catabolic process
SYNRCC307_RS11755	COG0832	Belongs to the urease beta subunit family
SYNRCC307_RS11760	COG0804	urea catabolic process
SYNRCC307_RS11770	COG2308	Evidence 4 Homologs of previously reported genes of
SYNRCC307_RS11805	COG4638	Rieske (2fe-2S)
SYNRCC307_RS11810	COG1116	anion transmembrane transporter activity
SYNRCC307_RS11815	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
SYNRCC307_RS11830	COG0375	protein maturation
SYNRCC307_RS11835	COG0010	Belongs to the arginase family
SYNRCC307_RS11840	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
SYNRCC307_RS11850	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
SYNRCC307_RS11860	COG2116	formate transmembrane transporter activity
SYNRCC307_RS11870	COG1513	Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide
SYNRCC307_RS11875	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
SYNRCC307_RS11890	COG0243	molybdopterin cofactor binding
SYNRCC307_RS11895	COG2223	nitrite transmembrane transporter activity
SYNRCC307_RS11900	COG0746	molybdenum cofactor guanylyltransferase activity
SYNRCC307_RS11905	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
SYNRCC307_RS11915	COG1643	Atp-dependent helicase
SYNRCC307_RS11925	COG0521	Mo-molybdopterin cofactor biosynthetic process
SYNRCC307_RS11935	COG0314	molybdopterin synthase activity
SYNRCC307_RS11940	COG0303	'Molybdopterin
SYNRCC307_RS11945	COG0315	cyclic pyranopterin monophosphate synthase activity
SYNRCC307_RS11950	COG0590	tRNA wobble adenosine to inosine editing
SYNRCC307_RS11960	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
SYNRCC307_RS11965	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
SYNRCC307_RS11970	COG0170	dolichyl monophosphate biosynthetic process
SYNRCC307_RS11980	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
SYNRCC307_RS11985	COG1049	propionate catabolic process, 2-methylcitrate cycle
SYNRCC307_RS12005	COG0788	formyltetrahydrofolate deformylase activity
SYNRCC307_RS12020	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
SYNRCC307_RS12020	COG2022	thiamine diphosphate biosynthetic process
SYNRCC307_RS12025	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
SYNRCC307_RS12030	COG0443	Heat shock 70 kDa protein
SYNRCC307_RS12035	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
SYNRCC307_RS12045	COG0360	Binds together with S18 to 16S ribosomal RNA
SYNRCC307_RS12055	COG0137	argininosuccinate synthase activity
SYNRCC307_RS12070	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
SYNRCC307_RS12080	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
SYNRCC307_RS12095	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
SYNRCC307_RS12100	COG0497	DNA recombination
SYNRCC307_RS12105	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
SYNRCC307_RS12115	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
SYNRCC307_RS12155	COG0454	-acetyltransferase
SYNRCC307_RS12160	COG2755	lipolytic protein G-D-S-L family
SYNRCC307_RS12160	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
SYNRCC307_RS12165	COG1216	Glycosyl transferase, family 2
SYNRCC307_RS12165	COG0438	transferase activity, transferring glycosyl groups
SYNRCC307_RS12170	COG1132	(ABC) transporter
SYNRCC307_RS12175	COG1089	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
SYNRCC307_RS12180	COG3659	wide pore channel activity
SYNRCC307_RS12180	COG3659	wide pore channel activity
SYNRCC307_RS12185	COG3659	wide pore channel activity
SYNRCC307_RS12185	COG3659	wide pore channel activity
SYNRCC307_RS12205	COG2205	protein histidine kinase activity
SYNRCC307_RS12265	COG2385	sporulation resulting in formation of a cellular spore
SYNRCC307_RS12285	COG3179	chitinase
SYNRCC307_RS12320	COG0701	Predicted permease