locus-tag	class	description
SynRS9909_RS00005	PF00712	DNA polymerase III beta subunit, N-terminal domain
SynRS9909_RS00005	PF02768	DNA polymerase III beta subunit, C-terminal domain
SynRS9909_RS00005	PF02767	DNA polymerase III beta subunit, central domain
SynRS9909_RS00015	PF18072	Formylglycinamide ribonucleotide amidotransferase linker domain
SynRS9909_RS00015	PF02769	AIR synthase related protein, C-terminal domain
SynRS9909_RS00015	PF00586	AIR synthase related protein, N-terminal domain
SynRS9909_RS00020	PF13537	Glutamine amidotransferase domain
SynRS9909_RS00020	PF00156	Phosphoribosyl transferase domain
SynRS9909_RS00025	PF03989	DNA gyrase C-terminal domain, beta-propeller
SynRS9909_RS00025	PF00521	DNA gyrase/topoisomerase IV, subunit A
SynRS9909_RS00035	PF08331	Domain of unknown function (DUF1730)
SynRS9909_RS00050	PF01029	NusB family
SynRS9909_RS00055	PF00448	SRP54-type protein, GTPase domain
SynRS9909_RS00055	PF02881	SRP54-type protein, helical bundle domain
SynRS9909_RS00060	PF07228	Stage II sporulation protein E (SpoIIE)
SynRS9909_RS00060	PF08673	Phosphoserine phosphatase RsbU, N-terminal domain
SynRS9909_RS00065	PF00206	Lyase
SynRS9909_RS00065	PF14698	Argininosuccinate lyase C-terminal
SynRS9909_RS00070	PF00076	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
SynRS9909_RS00075	PF01207	Dihydrouridine synthase (Dus)
SynRS9909_RS00080	PF01641	SelR domain
SynRS9909_RS00090	PF00482	Type II secretion system (T2SS), protein F
SynRS9909_RS00095	PF00437	Type II/IV secretion system protein
SynRS9909_RS00100	PF05157	Type II secretion system (T2SS), protein E, N-terminal domain
SynRS9909_RS00100	PF00437	Type II/IV secretion system protein
SynRS9909_RS00105	PF01025	GrpE
SynRS9909_RS00110	PF00684	DnaJ central domain
SynRS9909_RS00110	PF01556	DnaJ C terminal domain
SynRS9909_RS00110	PF00226	DnaJ domain
SynRS9909_RS00120	PF03193	RsgA GTPase
SynRS9909_RS00125	PF02575	YbaB/EbfC DNA-binding family
SynRS9909_RS00130	PF01565	FAD binding domain 
SynRS9909_RS00130	PF02873	UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain
SynRS9909_RS00135	PF01225	Mur ligase family, catalytic domain
SynRS9909_RS00135	PF02875	Mur ligase family, glutamate ligase domain
SynRS9909_RS00135	PF08245	Mur ligase middle domain
SynRS9909_RS00140	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
SynRS9909_RS00140	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
SynRS9909_RS00145	PF02769	AIR synthase related protein, C-terminal domain
SynRS9909_RS00145	PF00586	AIR synthase related protein, N-terminal domain
SynRS9909_RS00150	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
SynRS9909_RS00155	PF09285	Elongation factor P, C-terminal
SynRS9909_RS00155	PF08207	Elongation factor P (EF-P) KOW-like domain
SynRS9909_RS00155	PF01132	Elongation factor P (EF-P) OB domain
SynRS9909_RS00160	PF00364	Biotin-requiring enzyme
SynRS9909_RS00165	PF04166	Pyridoxal phosphate biosynthetic protein PdxA
SynRS9909_RS00190	PF00176	SNF2 family N-terminal domain
SynRS9909_RS00190	PF00271	Helicase conserved C-terminal domain
SynRS9909_RS00190	PF04434	SWIM zinc finger
SynRS9909_RS00225	PF00266	Aminotransferase class-V
SynRS9909_RS00230	PF01888	CbiD
SynRS9909_RS00235	PF00958	GMP synthase C terminal domain
SynRS9909_RS00235	PF00117	Glutamine amidotransferase class-I
SynRS9909_RS00250	PF03717	Penicillin-binding Protein dimerisation domain
SynRS9909_RS00250	PF00905	Penicillin binding protein transpeptidase domain
SynRS9909_RS00255	PF00534	Glycosyl transferases group 1
SynRS9909_RS00255	PF13439	Glycosyltransferase Family 4
SynRS9909_RS00260	PF16363	GDP-mannose 4,6 dehydratase
SynRS9909_RS00270	PF05690	Thiazole biosynthesis protein ThiG
SynRS9909_RS00285	PF00453	Ribosomal protein L20
SynRS9909_RS00290	PF01632	Ribosomal protein L35
SynRS9909_RS00295	PF08486	Stage II sporulation protein
SynRS9909_RS00315	PF12169	DNA polymerase III subunits gamma and tau domain III
SynRS9909_RS00325	PF10431	C-terminal, D2-small domain, of ClpB protein 
SynRS9909_RS00325	PF06689	ClpX C4-type zinc finger
SynRS9909_RS00325	PF07724	AAA domain (Cdc48 subfamily)
SynRS9909_RS00330	PF00574	Clp protease
SynRS9909_RS00335	PF05697	Bacterial trigger factor protein (TF)
SynRS9909_RS00335	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
SynRS9909_RS00335	PF05698	Bacterial trigger factor protein (TF) C-terminus
SynRS9909_RS00340	PF02774	Semialdehyde dehydrogenase, dimerisation domain
SynRS9909_RS00340	PF01118	Semialdehyde dehydrogenase, NAD binding domain
SynRS9909_RS00345	PF00701	Dihydrodipicolinate synthetase family
SynRS9909_RS00350	PF00753	Metallo-beta-lactamase superfamily
SynRS9909_RS00350	PF07521	Zn-dependent metallo-hydrolase RNA specificity domain
SynRS9909_RS00350	PF17770	Ribonuclease J C-terminal domain
SynRS9909_RS00360	PF09179	TilS substrate binding domain
SynRS9909_RS00360	PF01171	PP-loop family
SynRS9909_RS00370	PF01850	PIN domain
SynRS9909_RS00385	PF01624	MutS domain I
SynRS9909_RS00385	PF05188	MutS domain II
SynRS9909_RS00385	PF05192	MutS domain III
SynRS9909_RS00385	PF05190	MutS family domain IV
SynRS9909_RS00385	PF00488	MutS domain V
SynRS9909_RS00400	PF17757	UvrB interaction domain
SynRS9909_RS00400	PF12344	Ultra-violet resistance protein B
SynRS9909_RS00400	PF00271	Helicase conserved C-terminal domain
SynRS9909_RS00400	PF04851	Type III restriction enzyme, res subunit
SynRS9909_RS00400	PF02151	UvrB/uvrC motif
SynRS9909_RS00405	PF13840	ACT domain 
SynRS9909_RS00405	PF00696	Amino acid kinase family
SynRS9909_RS00405	PF01842	ACT domain
SynRS9909_RS00410	PF01850	PIN domain
SynRS9909_RS00435	PF02570	Precorrin-8X methylmutase
SynRS9909_RS00445	PF00005	ABC transporter
SynRS9909_RS00445	PF00664	ABC transporter transmembrane region
SynRS9909_RS00445	PF03412	Peptidase C39 family
SynRS9909_RS00455	PF01737	YCF9
SynRS9909_RS00460	PF00885	6,7-dimethyl-8-ribityllumazine synthase
SynRS9909_RS00475	PF01043	SecA preprotein cross-linking domain
SynRS9909_RS00475	PF07516	SecA Wing and Scaffold domain
SynRS9909_RS00475	PF07517	SecA DEAD-like domain
SynRS9909_RS00480	PF06426	Serine acetyltransferase, N-terminal 
SynRS9909_RS00480	PF00132	Bacterial transferase hexapeptide (six repeats)
SynRS9909_RS00490	PF01850	PIN domain
SynRS9909_RS00495	PF00392	Bacterial regulatory proteins, gntR family
SynRS9909_RS00500	PF05198	Translation initiation factor IF-3, N-terminal domain
SynRS9909_RS00500	PF00707	Translation initiation factor IF-3, C-terminal domain
SynRS9909_RS00510	PF00986	DNA gyrase B subunit, carboxyl terminus
SynRS9909_RS00510	PF00204	DNA gyrase B
SynRS9909_RS00510	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SynRS9909_RS00510	PF01751	Toprim domain
SynRS9909_RS00520	PF02537	CrcB-like protein, Camphor Resistance (CrcB)
SynRS9909_RS00525	PF02537	CrcB-like protein, Camphor Resistance (CrcB)
SynRS9909_RS00530	PF00255	Glutathione peroxidase
SynRS9909_RS00535	PF03448	MgtE intracellular N domain
SynRS9909_RS00535	PF01769	Divalent cation transporter
SynRS9909_RS00535	PF00571	CBS domain
SynRS9909_RS00540	PF04539	Sigma-70 region 3
SynRS9909_RS00540	PF00140	Sigma-70 factor, region 1.2
SynRS9909_RS00540	PF04542	Sigma-70 region 2 
SynRS9909_RS00540	PF04545	Sigma-70, region 4
SynRS9909_RS00545	PF00561	alpha/beta hydrolase fold
SynRS9909_RS00550	PF00873	AcrB/AcrD/AcrF family
SynRS9909_RS00555	PF16576	Barrel-sandwich domain of CusB or HlyD membrane-fusion
SynRS9909_RS00565	PF00202	Aminotransferase class-III
SynRS9909_RS00575	PF00743	Flavin-binding monooxygenase-like
SynRS9909_RS00580	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SynRS9909_RS00580	PF03466	LysR substrate binding domain
SynRS9909_RS00585	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
SynRS9909_RS00585	PF00205	Thiamine pyrophosphate enzyme, central domain
SynRS9909_RS00585	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
SynRS9909_RS00590	PF14815	NUDIX domain
SynRS9909_RS00590	PF00633	Helix-hairpin-helix motif
SynRS9909_RS00590	PF00730	HhH-GPD superfamily base excision DNA repair protein
SynRS9909_RS00595	PF00294	pfkB family carbohydrate kinase
SynRS9909_RS00600	PF02367	Threonylcarbamoyl adenosine biosynthesis protein TsaE
SynRS9909_RS00605	PF05221	S-adenosyl-L-homocysteine hydrolase
SynRS9909_RS00605	PF00670	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
SynRS9909_RS00610	PF09335	SNARE associated Golgi protein
SynRS9909_RS00615	PF00436	Single-strand binding protein family
SynRS9909_RS00640	PF00072	Response regulator receiver domain
SynRS9909_RS00640	PF00486	Transcriptional regulatory protein, C terminal
SynRS9909_RS00645	PF00152	tRNA synthetases class II (D, K and N) 
SynRS9909_RS00645	PF01336	OB-fold nucleic acid binding domain
SynRS9909_RS00665	PF10017	Histidine-specific methyltransferase, SAM-dependent
SynRS9909_RS00670	PF03781	Sulfatase-modifying factor enzyme 1
SynRS9909_RS00670	PF12867	DinB superfamily
SynRS9909_RS00675	PF00069	Protein kinase domain
SynRS9909_RS00680	PF01668	SmpB protein
SynRS9909_RS00685	PF05491	RuvB C-terminal winged helix domain
SynRS9909_RS00685	PF17864	RuvB AAA lid domain
SynRS9909_RS00685	PF05496	Holliday junction DNA helicase RuvB P-loop domain
SynRS9909_RS00695	PF07687	Peptidase dimerisation domain
SynRS9909_RS00695	PF01546	Peptidase family M20/M25/M40
SynRS9909_RS00710	PF01964	Radical SAM ThiC family
SynRS9909_RS00715	PF01370	NAD dependent epimerase/dehydratase family
SynRS9909_RS00720	PF02779	Transketolase, pyrimidine binding domain
SynRS9909_RS00720	PF02780	Transketolase, C-terminal domain
SynRS9909_RS00720	PF00456	Transketolase, thiamine diphosphate binding domain
SynRS9909_RS00725	PF00109	Beta-ketoacyl synthase, N-terminal domain
SynRS9909_RS00725	PF02801	Beta-ketoacyl synthase, C-terminal domain
SynRS9909_RS00730	PF00550	Phosphopantetheine attachment site
SynRS9909_RS00735	PF12838	4Fe-4S dicluster domain
SynRS9909_RS00740	PF01380	SIS domain
SynRS9909_RS00745	PF00483	Nucleotidyl transferase
SynRS9909_RS00745	PF01050	Mannose-6-phosphate isomerase
SynRS9909_RS00750	PF05239	PRC-barrel domain
SynRS9909_RS00750	PF01782	RimM N-terminal domain
SynRS9909_RS00770	PF00520	Ion transport protein
SynRS9909_RS00770	PF00027	Cyclic nucleotide-binding domain
SynRS9909_RS00785	PF00035	Double-stranded RNA binding motif
SynRS9909_RS00785	PF14622	Ribonuclease-III-like
SynRS9909_RS00815	PF00871	Acetokinase family
SynRS9909_RS00820	PF00343	Carbohydrate phosphorylase
SynRS9909_RS00825	PF09364	XFP N-terminal domain
SynRS9909_RS00825	PF03894	D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase
SynRS9909_RS00825	PF09363	XFP C-terminal domain
SynRS9909_RS00830	PF00999	Sodium/hydrogen exchanger family
SynRS9909_RS00840	PF12697	Alpha/beta hydrolase family
SynRS9909_RS00850	PF01565	FAD binding domain 
SynRS9909_RS00865	PF02754	Cysteine-rich domain
SynRS9909_RS00865	PF13183	4Fe-4S dicluster domain
SynRS9909_RS00885	PF00180	Isocitrate/isopropylmalate dehydrogenase
SynRS9909_RS00890	PF00535	Glycosyl transferase family 2
SynRS9909_RS00905	PF01126	Heme oxygenase
SynRS9909_RS00915	PF00664	ABC transporter transmembrane region
SynRS9909_RS00915	PF00005	ABC transporter
SynRS9909_RS00925	PF00534	Glycosyl transferases group 1
SynRS9909_RS00930	PF00534	Glycosyl transferases group 1
SynRS9909_RS00930	PF13439	Glycosyltransferase Family 4
SynRS9909_RS00935	PF13439	Glycosyltransferase Family 4
SynRS9909_RS00935	PF00534	Glycosyl transferases group 1
SynRS9909_RS00955	PF00793	DAHP synthetase I family
SynRS9909_RS00965	PF02348	Cytidylyltransferase
SynRS9909_RS00980	PF00571	CBS domain
SynRS9909_RS00980	PF01380	SIS domain
SynRS9909_RS00995	PF00571	CBS domain
SynRS9909_RS00995	PF01743	Poly A polymerase head domain
SynRS9909_RS01010	PF13361	UvrD-like helicase C-terminal domain
SynRS9909_RS01010	PF00580	UvrD/REP helicase N-terminal domain
SynRS9909_RS01030	PF00586	AIR synthase related protein, N-terminal domain
SynRS9909_RS01030	PF02769	AIR synthase related protein, C-terminal domain
SynRS9909_RS01040	PF16363	GDP-mannose 4,6 dehydratase
SynRS9909_RS01100	PF00005	ABC transporter
SynRS9909_RS01100	PF00664	ABC transporter transmembrane region
SynRS9909_RS01105	PF02719	Polysaccharide biosynthesis protein
SynRS9909_RS01110	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
SynRS9909_RS01115	PF02348	Cytidylyltransferase
SynRS9909_RS01120	PF03102	NeuB family
SynRS9909_RS01120	PF08666	SAF domain
SynRS9909_RS01125	PF00535	Glycosyl transferase family 2
SynRS9909_RS01130	PF02585	GlcNAc-PI de-N-acetylase
SynRS9909_RS01135	PF00551	Formyl transferase
SynRS9909_RS01135	PF02911	Formyl transferase, C-terminal domain
SynRS9909_RS01140	PF04321	RmlD substrate binding domain
SynRS9909_RS01165	PF13649	Methyltransferase domain
SynRS9909_RS01170	PF16363	GDP-mannose 4,6 dehydratase
SynRS9909_RS01200	PF00534	Glycosyl transferases group 1
SynRS9909_RS01200	PF13439	Glycosyltransferase Family 4
SynRS9909_RS01205	PF02397	Bacterial sugar transferase
SynRS9909_RS01215	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
SynRS9909_RS01220	PF02719	Polysaccharide biosynthesis protein
SynRS9909_RS01225	PF16363	GDP-mannose 4,6 dehydratase
SynRS9909_RS01230	PF04321	RmlD substrate binding domain
SynRS9909_RS01235	PF00908	dTDP-4-dehydrorhamnose 3,5-epimerase
SynRS9909_RS01240	PF00483	Nucleotidyl transferase
SynRS9909_RS01250	PF01850	PIN domain
SynRS9909_RS01255	PF02452	PemK-like, MazF-like toxin of type II toxin-antitoxin system
SynRS9909_RS01320	PF03129	Anticodon binding domain
SynRS9909_RS01320	PF13393	Histidyl-tRNA synthetase
SynRS9909_RS01330	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
SynRS9909_RS01330	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
SynRS9909_RS01330	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
SynRS9909_RS01335	PF01370	NAD dependent epimerase/dehydratase family
SynRS9909_RS01345	PF01788	PsbJ
SynRS9909_RS01350	PF02419	PsbL protein
SynRS9909_RS01355	PF00283	Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits
SynRS9909_RS01360	PF00283	Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits
SynRS9909_RS01360	PF00284	Lumenal portion of Cytochrome b559, alpha (gene psbE) subunit
SynRS9909_RS01365	PF14870	Photosynthesis system II assembly factor YCF48
SynRS9909_RS01370	PF00301	Rubredoxin
SynRS9909_RS01375	PF00507	NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
SynRS9909_RS01380	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
SynRS9909_RS01385	PF00329	Respiratory-chain NADH dehydrogenase, 30 Kd subunit
SynRS9909_RS01390	PF01933	Uncharacterised protein family UPF0052
SynRS9909_RS01395	PF08402	TOBE domain
SynRS9909_RS01395	PF00005	ABC transporter
SynRS9909_RS01400	PF02470	MlaD protein
SynRS9909_RS01405	PF13519	von Willebrand factor type A domain
SynRS9909_RS01405	PF17863	AAA lid domain
SynRS9909_RS01405	PF01078	Magnesium chelatase, subunit ChlI
SynRS9909_RS01420	PF01288	7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
SynRS9909_RS01425	PF00293	NUDIX domain
SynRS9909_RS01430	PF00875	DNA photolyase
SynRS9909_RS01430	PF03441	FAD binding domain of DNA photolyase
SynRS9909_RS01435	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
SynRS9909_RS01460	PF00475	Imidazoleglycerol-phosphate dehydratase
SynRS9909_RS01465	PF03055	Retinal pigment epithelial membrane protein
SynRS9909_RS01485	PF02028	BCCT, betaine/carnitine/choline family transporter
SynRS9909_RS01505	PF01725	Ham1 family
SynRS9909_RS01510	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
SynRS9909_RS01510	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
SynRS9909_RS01510	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
SynRS9909_RS01510	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
SynRS9909_RS01520	PF01571	Aminomethyltransferase folate-binding domain
SynRS9909_RS01585	PF07728	AAA domain (dynein-related subfamily)
SynRS9909_RS01585	PF12102	Domain of unknown function (DUF3578)
SynRS9909_RS01665	PF01695	IstB-like ATP binding protein
SynRS9909_RS01760	PF13495	Phage integrase, N-terminal SAM-like domain
SynRS9909_RS01760	PF00589	Phage integrase family
SynRS9909_RS01775	PF04542	Sigma-70 region 2 
SynRS9909_RS01775	PF04539	Sigma-70 region 3
SynRS9909_RS01775	PF04545	Sigma-70, region 4
SynRS9909_RS01795	PF00571	CBS domain
SynRS9909_RS01795	PF03471	Transporter associated domain
SynRS9909_RS01795	PF01595	Cyclin M transmembrane N-terminal domain
SynRS9909_RS01800	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
SynRS9909_RS01800	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
SynRS9909_RS01810	PF03808	Glycosyl transferase WecB/TagA/CpsF family
SynRS9909_RS01815	PF02533	Photosystem II 4 kDa reaction centre component
SynRS9909_RS01820	PF01702	Queuine tRNA-ribosyltransferase
SynRS9909_RS01825	PF02654	Cobalamin-5-phosphate synthase
SynRS9909_RS01830	PF00672	HAMP domain
SynRS9909_RS01830	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SynRS9909_RS01830	PF00512	His Kinase A (phospho-acceptor) domain
SynRS9909_RS01845	PF02142	MGS-like domain
SynRS9909_RS01845	PF01808	AICARFT/IMPCHase bienzyme
SynRS9909_RS01860	PF02401	LytB protein
SynRS9909_RS01865	PF00909	Ammonium Transporter Family
SynRS9909_RS01870	PF03749	Sugar fermentation stimulation protein RE domain
SynRS9909_RS01870	PF17746	SfsA N-terminal OB domain
SynRS9909_RS01875	PF03023	Lipid II flippase MurJ
SynRS9909_RS01900	PF00464	Serine hydroxymethyltransferase
SynRS9909_RS01905	PF00953	Glycosyl transferase family 4
SynRS9909_RS01910	PF00994	Probable molybdopterin binding domain
SynRS9909_RS01910	PF02464	Competence-damaged protein
SynRS9909_RS01910	PF18146	Damage-inducible protein CinA KH domain
SynRS9909_RS01915	PF00690	Cation transporter/ATPase, N-terminus
SynRS9909_RS01915	PF00689	Cation transporting ATPase, C-terminus
SynRS9909_RS01920	PF00330	Aconitase family (aconitate hydratase)
SynRS9909_RS01925	PF00694	Aconitase C-terminal domain
SynRS9909_RS01940	PF02532	Photosystem II reaction centre I protein (PSII 4.8 kDa protein)
SynRS9909_RS01950	PF02468	Photosystem II reaction centre N protein (psbN)
SynRS9909_RS01955	PF00737	Photosystem II 10 kDa phosphoprotein
SynRS9909_RS01960	PF02416	mttA/Hcf106 family
SynRS9909_RS01965	PF01195	Peptidyl-tRNA hydrolase
SynRS9909_RS01980	PF11283	Protein of unknown function (DUF3084)
SynRS9909_RS01985	PF00027	Cyclic nucleotide-binding domain
SynRS9909_RS01985	PF13545	Crp-like helix-turn-helix domain
SynRS9909_RS01990	PF01138	3' exoribonuclease family, domain 1
SynRS9909_RS01990	PF03725	3' exoribonuclease family, domain 2
SynRS9909_RS02000	PF00692	dUTPase
SynRS9909_RS02010	PF00085	Thioredoxin
SynRS9909_RS02020	PF14718	Soluble lytic murein transglycosylase L domain
SynRS9909_RS02020	PF01464	Transglycosylase SLT domain
SynRS9909_RS02030	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
SynRS9909_RS02030	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
SynRS9909_RS02030	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
SynRS9909_RS02030	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
SynRS9909_RS02035	PF01869	BadF/BadG/BcrA/BcrD ATPase family
SynRS9909_RS02045	PF02390	Putative methyltransferase 
SynRS9909_RS02065	PF08264	Anticodon-binding domain of tRNA
SynRS9909_RS02065	PF06827	Zinc finger found in FPG and IleRS
SynRS9909_RS02065	PF00133	tRNA synthetases class I (I, L, M and V)
SynRS9909_RS02085	PF02686	Glu-tRNAGln amidotransferase C subunit
SynRS9909_RS02090	PF02633	Creatinine amidohydrolase
SynRS9909_RS02100	PF02592	Putative vitamin uptake transporter
SynRS9909_RS02105	PF02245	Methylpurine-DNA glycosylase (MPG)
SynRS9909_RS02110	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
SynRS9909_RS02110	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
SynRS9909_RS02115	PF07992	Pyridine nucleotide-disulphide oxidoreductase
SynRS9909_RS02150	PF04127	DNA / pantothenate metabolism flavoprotein
SynRS9909_RS02150	PF02441	Flavoprotein
SynRS9909_RS02160	PF01716	Manganese-stabilising protein / photosystem II polypeptide
SynRS9909_RS02165	PF14306	PUA-like domain
SynRS9909_RS02165	PF01747	ATP-sulfurylase
SynRS9909_RS02170	PF06480	FtsH Extracellular
SynRS9909_RS02170	PF00004	ATPase family associated with various cellular activities (AAA)
SynRS9909_RS02170	PF17862	AAA+ lid domain
SynRS9909_RS02170	PF01434	Peptidase family M41
SynRS9909_RS02185	PF01264	Chorismate synthase
SynRS9909_RS02190	PF08241	Methyltransferase domain
SynRS9909_RS02195	PF13649	Methyltransferase domain
SynRS9909_RS02200	PF00005	ABC transporter
SynRS9909_RS02200	PF00571	CBS domain
SynRS9909_RS02205	PF00528	Binding-protein-dependent transport system inner membrane component
SynRS9909_RS02210	PF04069	Substrate binding domain of ABC-type glycine betaine transport system
SynRS9909_RS02215	PF00535	Glycosyl transferase family 2
SynRS9909_RS02220	PF00128	Alpha amylase, catalytic domain
SynRS9909_RS02245	PF00124	Photosynthetic reaction centre protein
SynRS9909_RS02260	PF02617	ATP-dependent Clp protease adaptor protein ClpS
SynRS9909_RS02265	PF00155	Aminotransferase class I and II
SynRS9909_RS02275	PF10150	Ribonuclease E/G family
SynRS9909_RS02280	PF01351	Ribonuclease HII
SynRS9909_RS02290	PF00800	Prephenate dehydratase
SynRS9909_RS02290	PF01817	Chorismate mutase type II
SynRS9909_RS02290	PF01842	ACT domain
SynRS9909_RS02295	PF08241	Methyltransferase domain
SynRS9909_RS02300	PF00004	ATPase family associated with various cellular activities (AAA)
SynRS9909_RS02300	PF05362	Lon protease (S16) C-terminal proteolytic domain
SynRS9909_RS02300	PF02190	ATP-dependent protease La (LON) substrate-binding domain 
SynRS9909_RS02305	PF00338	Ribosomal protein S10p/S20e
SynRS9909_RS02310	PF00009	Elongation factor Tu GTP binding domain
SynRS9909_RS02310	PF03144	Elongation factor Tu domain 2
SynRS9909_RS02310	PF03143	Elongation factor Tu C-terminal domain
SynRS9909_RS02315	PF03144	Elongation factor Tu domain 2
SynRS9909_RS02315	PF00009	Elongation factor Tu GTP binding domain
SynRS9909_RS02315	PF03764	Elongation factor G, domain IV
SynRS9909_RS02315	PF00679	Elongation factor G C-terminus
SynRS9909_RS02315	PF14492	Elongation Factor G, domain II
SynRS9909_RS02320	PF00177	Ribosomal protein S7p/S5e
SynRS9909_RS02325	PF00164	Ribosomal protein S12/S23
SynRS9909_RS02340	PF04898	Glutamate synthase central domain
SynRS9909_RS02340	PF01493	GXGXG motif
SynRS9909_RS02340	PF01645	Conserved region in glutamate synthase
SynRS9909_RS02340	PF00310	Glutamine amidotransferases class-II
SynRS9909_RS02370	PF04055	Radical SAM superfamily
SynRS9909_RS02380	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
SynRS9909_RS02390	PF00223	Photosystem I psaA/psaB protein
SynRS9909_RS02395	PF00223	Photosystem I psaA/psaB protein
SynRS9909_RS02410	PF00487	Fatty acid desaturase
SynRS9909_RS02415	PF00873	AcrB/AcrD/AcrF family
SynRS9909_RS02420	PF02605	Photosystem I reaction centre subunit XI
SynRS9909_RS02435	PF00535	Glycosyl transferase family 2
SynRS9909_RS02455	PF01168	Alanine racemase, N-terminal domain
SynRS9909_RS02455	PF00842	Alanine racemase, C-terminal domain
SynRS9909_RS02465	PF00472	RF-1 domain
SynRS9909_RS02465	PF03462	PCRF domain
SynRS9909_RS02470	PF01197	Ribosomal protein L31
SynRS9909_RS02475	PF00380	Ribosomal protein S9/S16
SynRS9909_RS02480	PF00572	Ribosomal protein L13
SynRS9909_RS02485	PF01416	tRNA pseudouridine synthase
SynRS9909_RS02490	PF01196	Ribosomal protein L17
SynRS9909_RS02495	PF01193	RNA polymerase Rpb3/Rpb11 dimerisation domain
SynRS9909_RS02495	PF03118	Bacterial RNA polymerase, alpha chain C terminal domain
SynRS9909_RS02495	PF01000	RNA polymerase Rpb3/RpoA insert domain
SynRS9909_RS02500	PF00411	Ribosomal protein S11
SynRS9909_RS02505	PF00416	Ribosomal protein S13/S18
SynRS9909_RS02510	PF00444	Ribosomal protein L36
SynRS9909_RS02520	PF00344	SecY translocase
SynRS9909_RS02525	PF00828	Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
SynRS9909_RS02530	PF03719	Ribosomal protein S5, C-terminal domain
SynRS9909_RS02530	PF00333	Ribosomal protein S5, N-terminal domain
SynRS9909_RS02535	PF00861	Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
SynRS9909_RS02540	PF00347	Ribosomal protein L6
SynRS9909_RS02545	PF00410	Ribosomal protein S8
SynRS9909_RS02550	PF00673	ribosomal L5P family C-terminus
SynRS9909_RS02550	PF00281	Ribosomal protein L5
SynRS9909_RS02555	PF17136	Ribosomal proteins 50S L24/mitochondrial 39S L24
SynRS9909_RS02555	PF00467	KOW motif
SynRS9909_RS02560	PF00238	Ribosomal protein L14p/L23e
SynRS9909_RS02565	PF00366	Ribosomal protein S17
SynRS9909_RS02570	PF00831	Ribosomal L29 protein
SynRS9909_RS02575	PF00252	Ribosomal protein L16p/L10e
SynRS9909_RS02580	PF00189	Ribosomal protein S3, C-terminal domain
SynRS9909_RS02580	PF07650	KH domain
SynRS9909_RS02585	PF00237	Ribosomal protein L22p/L17e
SynRS9909_RS02590	PF00203	Ribosomal protein S19
SynRS9909_RS02595	PF03947	Ribosomal Proteins L2, C-terminal domain
SynRS9909_RS02595	PF00181	Ribosomal Proteins L2, RNA binding domain
SynRS9909_RS02600	PF00276	Ribosomal protein L23
SynRS9909_RS02605	PF00573	Ribosomal protein L4/L1 family
SynRS9909_RS02610	PF00297	Ribosomal protein L3
SynRS9909_RS02615	PF11909	NADH-quinone oxidoreductase cyanobacterial subunit N
SynRS9909_RS02665	PF01494	FAD binding domain
SynRS9909_RS02670	PF03881	Fructosamine kinase
SynRS9909_RS02685	PF00899	ThiF family
SynRS9909_RS02685	PF00581	Rhodanese-like domain
SynRS9909_RS02690	PF02572	ATP:corrinoid adenosyltransferase BtuR/CobO/CobP
SynRS9909_RS02695	PF00999	Sodium/hydrogen exchanger family
SynRS9909_RS02695	PF02080	TrkA-C domain
SynRS9909_RS02695	PF02254	TrkA-N domain
SynRS9909_RS02700	PF02540	NAD synthase
SynRS9909_RS02705	PF02675	S-adenosylmethionine decarboxylase 
SynRS9909_RS02710	PF02463	RecF/RecN/SMC N terminal domain
SynRS9909_RS02725	PF00311	Phosphoenolpyruvate carboxylase
SynRS9909_RS02730	PF04107	Glutamate-cysteine ligase family 2(GCS2)
SynRS9909_RS02735	PF00425	chorismate binding enzyme
SynRS9909_RS02735	PF04715	Anthranilate synthase component I, N terminal region
SynRS9909_RS02740	PF02531	PsaD
SynRS9909_RS02750	PF01098	Cell cycle protein
SynRS9909_RS02755	PF01883	Iron-sulfur cluster assembly protein
SynRS9909_RS02755	PF10609	NUBPL iron-transfer P-loop NTPase
SynRS9909_RS02760	PF01218	Coproporphyrinogen III oxidase
SynRS9909_RS02820	PF00586	AIR synthase related protein, N-terminal domain
SynRS9909_RS02820	PF02769	AIR synthase related protein, C-terminal domain
SynRS9909_RS02825	PF03330	Lytic transglycolase
SynRS9909_RS02830	PF02224	Cytidylate kinase
SynRS9909_RS02830	PF02569	Pantoate-beta-alanine ligase
SynRS9909_RS02835	PF01451	Low molecular weight phosphotyrosine protein phosphatase
SynRS9909_RS02845	PF03130	PBS lyase HEAT-like repeat
SynRS9909_RS02850	PF00502	Phycobilisome protein
SynRS9909_RS02855	PF00502	Phycobilisome protein
SynRS9909_RS02860	PF00502	Phycobilisome protein
SynRS9909_RS02865	PF00502	Phycobilisome protein
SynRS9909_RS02875	PF01383	CpcD/allophycocyanin linker domain
SynRS9909_RS02875	PF00427	Phycobilisome Linker polypeptide
SynRS9909_RS02885	PF00427	Phycobilisome Linker polypeptide
SynRS9909_RS02890	PF06206	CpeT/CpcT family (DUF1001)
SynRS9909_RS02915	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
SynRS9909_RS02920	PF02772	S-adenosylmethionine synthetase, central domain
SynRS9909_RS02920	PF00438	S-adenosylmethionine synthetase, N-terminal domain
SynRS9909_RS02920	PF02773	S-adenosylmethionine synthetase, C-terminal domain
SynRS9909_RS02930	PF00575	S1 RNA binding domain
SynRS9909_RS02935	PF03477	ATP cone domain
SynRS9909_RS02940	PF01405	Photosystem II reaction centre T protein
SynRS9909_RS02945	PF00421	Photosystem II protein
SynRS9909_RS02955	PF05151	Photosystem II reaction centre M protein (PsbM)
SynRS9909_RS02960	PF00582	Universal stress protein family
SynRS9909_RS02970	PF18255	DNA processing protein A sterile alpha motif domain
SynRS9909_RS02970	PF02481	DNA recombination-mediator protein A
SynRS9909_RS02975	PF05175	Methyltransferase small domain
SynRS9909_RS02980	PF01300	Telomere recombination
SynRS9909_RS02995	PF00196	Bacterial regulatory proteins, luxR family
SynRS9909_RS02995	PF00072	Response regulator receiver domain
SynRS9909_RS03000	PF03776	Septum formation topological specificity factor MinE
SynRS9909_RS03005	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
SynRS9909_RS03010	PF03775	Septum formation inhibitor MinC, C-terminal domain
SynRS9909_RS03025	PF02417	Chromate transporter
SynRS9909_RS03030	PF01966	HD domain
SynRS9909_RS03035	PF00595	PDZ domain
SynRS9909_RS03035	PF03572	Peptidase family S41
SynRS9909_RS03040	PF00033	Cytochrome b/b6/petB
SynRS9909_RS03045	PF00032	Cytochrome b(C-terminal)/b6/petD
SynRS9909_RS03080	PF13419	Haloacid dehalogenase-like hydrolase
SynRS9909_RS03085	PF00596	Class II Aldolase and Adducin N-terminal domain
SynRS9909_RS03090	PF06827	Zinc finger found in FPG and IleRS
SynRS9909_RS03090	PF01149	Formamidopyrimidine-DNA glycosylase N-terminal domain
SynRS9909_RS03090	PF06831	Formamidopyrimidine-DNA glycosylase H2TH domain
SynRS9909_RS03095	PF02427	Photosystem I reaction centre subunit IV / PsaE
SynRS9909_RS03105	PF09382	RQC domain
SynRS9909_RS03105	PF00270	DEAD/DEAH box helicase
SynRS9909_RS03105	PF00271	Helicase conserved C-terminal domain
SynRS9909_RS03105	PF00570	HRDC domain
SynRS9909_RS03105	PF16124	RecQ zinc-binding
SynRS9909_RS03110	PF01476	LysM domain
SynRS9909_RS03110	PF05257	CHAP domain
SynRS9909_RS03115	PF00171	Aldehyde dehydrogenase family
SynRS9909_RS03120	PF00128	Alpha amylase, catalytic domain
SynRS9909_RS03120	PF16657	Maltogenic Amylase, C-terminal domain
SynRS9909_RS03125	PF01266	FAD dependent oxidoreductase
SynRS9909_RS03125	PF16901	C-terminal domain of alpha-glycerophosphate oxidase
SynRS9909_RS03130	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
SynRS9909_RS03130	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
SynRS9909_RS03135	PF16657	Maltogenic Amylase, C-terminal domain
SynRS9909_RS03135	PF00128	Alpha amylase, catalytic domain
SynRS9909_RS03135	PF02903	Alpha amylase, N-terminal ig-like domain
SynRS9909_RS03140	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SynRS9909_RS03140	PF00512	His Kinase A (phospho-acceptor) domain
SynRS9909_RS03140	PF00989	PAS fold
SynRS9909_RS03165	PF01220	Dehydroquinase class II
SynRS9909_RS03180	PF03079	ARD/ARD' family
SynRS9909_RS03190	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
SynRS9909_RS03200	PF03170	Bacterial cellulose synthase subunit
SynRS9909_RS03200	PF00535	Glycosyl transferase family 2
SynRS9909_RS03200	PF07238	PilZ domain
SynRS9909_RS03205	PF01207	Dihydrouridine synthase (Dus)
SynRS9909_RS03220	PF03734	L,D-transpeptidase catalytic domain
SynRS9909_RS03220	PF17964	Bacterial Ig domain
SynRS9909_RS03225	PF01926	50S ribosome-binding GTPase
SynRS9909_RS03225	PF14714	KH-domain-like of EngA bacterial GTPase enzymes, C-terminal
SynRS9909_RS03230	PF02361	Cobalt transport protein
SynRS9909_RS03240	PF01168	Alanine racemase, N-terminal domain
SynRS9909_RS03245	PF04472	Cell division protein SepF
SynRS9909_RS03250	PF14748	Pyrroline-5-carboxylate reductase dimerisation
SynRS9909_RS03250	PF03807	NADP oxidoreductase coenzyme F420-dependent
SynRS9909_RS03255	PF13579	Glycosyl transferase 4-like domain
SynRS9909_RS03255	PF00534	Glycosyl transferases group 1
SynRS9909_RS03265	PF11967	Recombination protein O N terminal
SynRS9909_RS03265	PF02565	Recombination protein O C terminal
SynRS9909_RS03270	PF01791	DeoC/LacD family aldolase
SynRS9909_RS03275	PF16321	Sigma 54 modulation/S30EA ribosomal protein C terminus
SynRS9909_RS03275	PF02482	Sigma 54 modulation protein / S30EA ribosomal protein
SynRS9909_RS03280	PF03099	Biotin/lipoate A/B protein ligase family
SynRS9909_RS03285	PF00501	AMP-binding enzyme
SynRS9909_RS03295	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
SynRS9909_RS03295	PF02817	e3 binding domain
SynRS9909_RS03295	PF00364	Biotin-requiring enzyme
SynRS9909_RS03305	PF13520	Amino acid permease
SynRS9909_RS03310	PF02547	Queuosine biosynthesis protein
SynRS9909_RS03315	PF00291	Pyridoxal-phosphate dependent enzyme
SynRS9909_RS03320	PF01053	Cys/Met metabolism PLP-dependent enzyme
SynRS9909_RS03325	PF01053	Cys/Met metabolism PLP-dependent enzyme
SynRS9909_RS03340	PF18412	Outer-membrane lipoprotein Wza C-terminal domain
SynRS9909_RS03340	PF10531	SLBB domain
SynRS9909_RS03340	PF02563	Polysaccharide biosynthesis/export protein
SynRS9909_RS03350	PF13614	AAA domain
SynRS9909_RS03355	PF01479	S4 domain
SynRS9909_RS03355	PF00163	Ribosomal protein S4/S9 N-terminal domain
SynRS9909_RS03360	PF01809	Putative membrane protein insertion efficiency factor
SynRS9909_RS03370	PF01225	Mur ligase family, catalytic domain
SynRS9909_RS03370	PF02875	Mur ligase family, glutamate ligase domain
SynRS9909_RS03370	PF08245	Mur ligase middle domain
SynRS9909_RS03385	PF08443	RimK-like ATP-grasp domain
SynRS9909_RS03385	PF18030	RimK PreATP-grasp domain
SynRS9909_RS03395	PF01106	NifU-like domain
SynRS9909_RS03400	PF06039	Malate:quinone oxidoreductase (Mqo)
SynRS9909_RS03405	PF00893	Small Multidrug Resistance protein
SynRS9909_RS03420	PF06421	GTP-binding protein LepA C-terminus
SynRS9909_RS03420	PF03144	Elongation factor Tu domain 2
SynRS9909_RS03420	PF00009	Elongation factor Tu GTP binding domain
SynRS9909_RS03420	PF00679	Elongation factor G C-terminus
SynRS9909_RS03430	PF00114	Pilin (bacterial filament)
SynRS9909_RS03430	PF07963	Prokaryotic N-terminal methylation motif
SynRS9909_RS03445	PF07963	Prokaryotic N-terminal methylation motif
SynRS9909_RS03445	PF14245	Type IV pilin PilA
SynRS9909_RS03450	PF07963	Prokaryotic N-terminal methylation motif
SynRS9909_RS03450	PF00114	Pilin (bacterial filament)
SynRS9909_RS03455	PF18719	ArlS sensor domain
SynRS9909_RS03455	PF00512	His Kinase A (phospho-acceptor) domain
SynRS9909_RS03455	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SynRS9909_RS03460	PF00486	Transcriptional regulatory protein, C terminal
SynRS9909_RS03460	PF00072	Response regulator receiver domain
SynRS9909_RS03485	PF00672	HAMP domain
SynRS9909_RS03485	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SynRS9909_RS03485	PF00512	His Kinase A (phospho-acceptor) domain
SynRS9909_RS03500	PF12105	SpoU, rRNA methylase, C-terminal
SynRS9909_RS03500	PF00588	SpoU rRNA Methylase family
SynRS9909_RS03510	PF01029	NusB family
SynRS9909_RS03510	PF01189	16S rRNA methyltransferase RsmB/F
SynRS9909_RS03515	PF00912	Transglycosylase
SynRS9909_RS03515	PF00905	Penicillin binding protein transpeptidase domain
SynRS9909_RS03520	PF01040	UbiA prenyltransferase family
SynRS9909_RS03530	PF00977	Histidine biosynthesis protein
SynRS9909_RS03540	PF01209	ubiE/COQ5 methyltransferase family
SynRS9909_RS03550	PF02091	Glycyl-tRNA synthetase alpha subunit
SynRS9909_RS03580	PF00484	Carbonic anhydrase
SynRS9909_RS03600	PF00403	Heavy-metal-associated domain
SynRS9909_RS03635	PF02397	Bacterial sugar transferase
SynRS9909_RS03645	PF03186	CobD/Cbib protein
SynRS9909_RS03650	PF07991	Acetohydroxy acid isomeroreductase, NADPH-binding domain
SynRS9909_RS03650	PF01450	Acetohydroxy acid isomeroreductase, catalytic domain
SynRS9909_RS03655	PF00574	Clp protease
SynRS9909_RS03660	PF00574	Clp protease
SynRS9909_RS03675	PF02548	Ketopantoate hydroxymethyltransferase
SynRS9909_RS03685	PF12327	FtsZ family, C-terminal domain
SynRS9909_RS03685	PF00091	Tubulin/FtsZ family, GTPase domain
SynRS9909_RS03690	PF08478	POTRA domain, FtsQ-type
SynRS9909_RS03690	PF03799	Cell division protein FtsQ
SynRS9909_RS03700	PF07478	D-ala D-ala ligase C-terminus
SynRS9909_RS03700	PF01820	D-ala D-ala ligase N-terminus
SynRS9909_RS03705	PF04055	Radical SAM superfamily
SynRS9909_RS03705	PF01938	TRAM domain
SynRS9909_RS03705	PF00919	Uncharacterized protein family UPF0004
SynRS9909_RS03710	PF13378	Enolase C-terminal domain-like
SynRS9909_RS03710	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
SynRS9909_RS03745	PF08245	Mur ligase middle domain
SynRS9909_RS03745	PF02875	Mur ligase family, glutamate ligase domain
SynRS9909_RS03750	PF00202	Aminotransferase class-III
SynRS9909_RS03755	PF00202	Aminotransferase class-III
SynRS9909_RS03760	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
SynRS9909_RS03775	PF08032	RNA 2'-O ribose methyltransferase substrate binding
SynRS9909_RS03775	PF00588	SpoU rRNA Methylase family
SynRS9909_RS03780	PF07992	Pyridine nucleotide-disulphide oxidoreductase
SynRS9909_RS03780	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
SynRS9909_RS03785	PF00218	Indole-3-glycerol phosphate synthase
SynRS9909_RS03795	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
SynRS9909_RS03795	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
SynRS9909_RS03800	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
SynRS9909_RS03820	PF03853	YjeF-related protein N-terminus
SynRS9909_RS03820	PF01256	Carbohydrate kinase
SynRS9909_RS03825	PF04545	Sigma-70, region 4
SynRS9909_RS03825	PF04539	Sigma-70 region 3
SynRS9909_RS03825	PF04542	Sigma-70 region 2 
SynRS9909_RS03825	PF00140	Sigma-70 factor, region 1.2
SynRS9909_RS03830	PF00676	Dehydrogenase E1 component
SynRS9909_RS03840	PF00448	SRP54-type protein, GTPase domain
SynRS9909_RS03840	PF02881	SRP54-type protein, helical bundle domain
SynRS9909_RS03840	PF02978	Signal peptide binding domain
SynRS9909_RS03845	PF00886	Ribosomal protein S16
SynRS9909_RS03850	PF02562	PhoH-like protein
SynRS9909_RS03860	PF00083	Sugar (and other) transporter
SynRS9909_RS03875	PF01926	50S ribosome-binding GTPase
SynRS9909_RS03875	PF07650	KH domain
SynRS9909_RS03880	PF09367	CpeS-like protein
SynRS9909_RS03885	PF01746	tRNA (Guanine-1)-methyltransferase
SynRS9909_RS03890	PF02542	YgbB family
SynRS9909_RS03900	PF00731	AIR carboxylase
SynRS9909_RS03915	PF02597	ThiS family
SynRS9909_RS03915	PF05690	Thiazole biosynthesis protein ThiG
SynRS9909_RS03920	PF17792	ThiD2 family
SynRS9909_RS03920	PF02581	Thiamine monophosphate synthase
SynRS9909_RS03925	PF01687	Riboflavin kinase
SynRS9909_RS03925	PF06574	FAD synthetase
SynRS9909_RS03935	PF01975	Survival protein SurE
SynRS9909_RS03940	PF02912	Aminoacyl tRNA synthetase class II, N-terminal domain
SynRS9909_RS03940	PF01409	tRNA synthetases class II core domain (F)
SynRS9909_RS03945	PF01513	ATP-NAD kinase
SynRS9909_RS03950	PF00072	Response regulator receiver domain
SynRS9909_RS03950	PF00486	Transcriptional regulatory protein, C terminal
SynRS9909_RS03965	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
SynRS9909_RS03995	PF01872	RibD C-terminal domain
SynRS9909_RS03995	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
SynRS9909_RS04010	PF17862	AAA+ lid domain
SynRS9909_RS04010	PF06480	FtsH Extracellular
SynRS9909_RS04010	PF00004	ATPase family associated with various cellular activities (AAA)
SynRS9909_RS04010	PF01434	Peptidase family M41
SynRS9909_RS04015	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
SynRS9909_RS04015	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
SynRS9909_RS04020	PF00717	Peptidase S24-like
SynRS9909_RS04020	PF01726	LexA DNA binding domain
SynRS9909_RS04055	PF00654	Voltage gated chloride channel
SynRS9909_RS04065	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
SynRS9909_RS04065	PF07685	CobB/CobQ-like glutamine amidotransferase domain
SynRS9909_RS04085	PF02545	Maf-like protein
SynRS9909_RS04090	PF07804	HipA-like C-terminal domain
SynRS9909_RS04090	PF13657	HipA N-terminal domain
SynRS9909_RS04145	PF00421	Photosystem II protein
SynRS9909_RS04150	PF00124	Photosynthetic reaction centre protein
SynRS9909_RS04155	PF02392	Ycf4
SynRS9909_RS04160	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
SynRS9909_RS04165	PF10369	Small subunit of acetolactate synthase
SynRS9909_RS04170	PF12697	Alpha/beta hydrolase family
SynRS9909_RS04180	PF08041	PetM family of cytochrome b6f complex subunit 7
SynRS9909_RS04195	PF13847	Methyltransferase domain
SynRS9909_RS04200	PF00849	RNA pseudouridylate synthase
SynRS9909_RS04210	PF01176	Translation initiation factor 1A / IF-1
SynRS9909_RS04215	PF07992	Pyridine nucleotide-disulphide oxidoreductase
SynRS9909_RS04240	PF05222	Alanine dehydrogenase/PNT, N-terminal domain
SynRS9909_RS04240	PF01262	Alanine dehydrogenase/PNT, C-terminal domain
SynRS9909_RS04245	PF12769	4TM region of pyridine nucleotide transhydrogenase, mitoch
SynRS9909_RS04245	PF05222	Alanine dehydrogenase/PNT, N-terminal domain
SynRS9909_RS04245	PF01262	Alanine dehydrogenase/PNT, C-terminal domain
SynRS9909_RS04250	PF02233	NAD(P) transhydrogenase beta subunit
SynRS9909_RS04265	PF08436	1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain
SynRS9909_RS04265	PF02670	1-deoxy-D-xylulose 5-phosphate reductoisomerase
SynRS9909_RS04265	PF13288	DXP reductoisomerase C-terminal domain
SynRS9909_RS04270	PF00209	Sodium:neurotransmitter symporter family
SynRS9909_RS04285	PF09190	DALR domain
SynRS9909_RS04285	PF01406	tRNA synthetases class I (C) catalytic domain
SynRS9909_RS04290	PF01612	3'-5' exonuclease
SynRS9909_RS04290	PF00476	DNA polymerase family A
SynRS9909_RS04290	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
SynRS9909_RS04290	PF01367	5'-3' exonuclease, C-terminal SAM fold
SynRS9909_RS04300	PF01926	50S ribosome-binding GTPase
SynRS9909_RS04300	PF06071	Protein of unknown function (DUF933)
SynRS9909_RS04310	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SynRS9909_RS04310	PF00512	His Kinase A (phospho-acceptor) domain
SynRS9909_RS04310	PF00989	PAS fold
SynRS9909_RS04310	PF08447	PAS fold
SynRS9909_RS04310	PF13426	PAS domain
SynRS9909_RS04310	PF13493	Domain of unknown function (DUF4118)
SynRS9909_RS04330	PF12951	Passenger-associated-transport-repeat
SynRS9909_RS04330	PF12951	Passenger-associated-transport-repeat
SynRS9909_RS04330	PF12951	Passenger-associated-transport-repeat
SynRS9909_RS04350	PF00512	His Kinase A (phospho-acceptor) domain
SynRS9909_RS04350	PF02743	Cache domain
SynRS9909_RS04350	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SynRS9909_RS04355	PF00196	Bacterial regulatory proteins, luxR family
SynRS9909_RS04355	PF00072	Response regulator receiver domain
SynRS9909_RS04385	PF00528	Binding-protein-dependent transport system inner membrane component
SynRS9909_RS04390	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
SynRS9909_RS04400	PF03447	Homoserine dehydrogenase, NAD binding domain
SynRS9909_RS04400	PF01842	ACT domain
SynRS9909_RS04400	PF00742	Homoserine dehydrogenase
SynRS9909_RS04405	PF02657	Fe-S metabolism associated domain
SynRS9909_RS04420	PF01812	5-formyltetrahydrofolate cyclo-ligase family
SynRS9909_RS04425	PF02075	Crossover junction endodeoxyribonuclease RuvC
SynRS9909_RS04430	PF17863	AAA lid domain
SynRS9909_RS04430	PF01078	Magnesium chelatase, subunit ChlI
SynRS9909_RS04445	PF00588	SpoU rRNA Methylase family
SynRS9909_RS04450	PF13442	Cytochrome C oxidase, cbb3-type, subunit III 
SynRS9909_RS04455	PF02529	Cytochrome B6-F complex subunit 5
SynRS9909_RS04460	PF00117	Glutamine amidotransferase class-I
SynRS9909_RS04465	PF00085	Thioredoxin
SynRS9909_RS04470	PF00478	IMP dehydrogenase / GMP reductase domain
SynRS9909_RS04495	PF09210	Domain of unknown function (DUF1957)
SynRS9909_RS04495	PF03065	Glycosyl hydrolase family 57
SynRS9909_RS04500	PF00682	HMGL-like
SynRS9909_RS04500	PF08502	LeuA allosteric (dimerisation) domain
SynRS9909_RS04505	PF00528	Binding-protein-dependent transport system inner membrane component
SynRS9909_RS04525	PF00111	2Fe-2S iron-sulfur cluster binding domain
SynRS9909_RS04545	PF01910	Thiamine-binding protein
SynRS9909_RS04565	PF01966	HD domain
SynRS9909_RS04565	PF07697	7TM-HD extracellular
SynRS9909_RS04565	PF07698	7TM receptor with intracellular HD hydrolase
SynRS9909_RS04570	PF00763	Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
SynRS9909_RS04570	PF02882	Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
SynRS9909_RS04575	PF00348	Polyprenyl synthetase
SynRS9909_RS04585	PF14490	Helix-hairpin-helix containing domain
SynRS9909_RS04585	PF13538	UvrD-like helicase C-terminal domain
SynRS9909_RS04585	PF18335	ATP-dependent RecD-like DNA helicase SH3 domain
SynRS9909_RS04595	PF00300	Histidine phosphatase superfamily (branch 1)
SynRS9909_RS04600	PF00708	Acylphosphatase
SynRS9909_RS04605	PF07685	CobB/CobQ-like glutamine amidotransferase domain
SynRS9909_RS04605	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
SynRS9909_RS04610	PF01471	Putative peptidoglycan binding domain
SynRS9909_RS04610	PF10128	Glucose-6-phosphate dehydrogenase subunit
SynRS9909_RS04615	PF02781	Glucose-6-phosphate dehydrogenase, C-terminal domain
SynRS9909_RS04615	PF00479	Glucose-6-phosphate dehydrogenase, NAD binding domain
SynRS9909_RS04620	PF00175	Oxidoreductase NAD-binding domain 
SynRS9909_RS04620	PF01383	CpcD/allophycocyanin linker domain
SynRS9909_RS04635	PF07689	KaiB domain
SynRS9909_RS04635	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SynRS9909_RS04650	PF17432	Domain of unknown function (DUF3458_C) ARM repeats
SynRS9909_RS04650	PF11940	Domain of unknown function (DUF3458) Ig-like fold
SynRS9909_RS04650	PF01433	Peptidase family M1 domain
SynRS9909_RS04655	PF16874	Glycosyl hydrolase family 36 C-terminal domain
SynRS9909_RS04655	PF16875	Glycosyl hydrolase family 36 N-terminal domain
SynRS9909_RS04660	PF14572	Phosphoribosyl synthetase-associated domain
SynRS9909_RS04660	PF13793	N-terminal domain of ribose phosphate pyrophosphokinase
SynRS9909_RS04675	PF04422	Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term
SynRS9909_RS04675	PF04432	Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus
SynRS9909_RS04680	PF02446	4-alpha-glucanotransferase
SynRS9909_RS04690	PF01479	S4 domain
SynRS9909_RS04690	PF00849	RNA pseudouridylate synthase
SynRS9909_RS04695	PF00512	His Kinase A (phospho-acceptor) domain
SynRS9909_RS04695	PF00989	PAS fold
SynRS9909_RS04695	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SynRS9909_RS04700	PF00072	Response regulator receiver domain
SynRS9909_RS04700	PF00486	Transcriptional regulatory protein, C terminal
SynRS9909_RS04705	PF04539	Sigma-70 region 3
SynRS9909_RS04705	PF04542	Sigma-70 region 2 
SynRS9909_RS04705	PF00140	Sigma-70 factor, region 1.2
SynRS9909_RS04705	PF04545	Sigma-70, region 4
SynRS9909_RS04715	PF03109	ABC1 family
SynRS9909_RS04720	PF03711	Orn/Lys/Arg decarboxylase, C-terminal domain
SynRS9909_RS04720	PF01276	Orn/Lys/Arg decarboxylase, major domain
SynRS9909_RS04735	PF12697	Alpha/beta hydrolase family
SynRS9909_RS04740	PF00465	Iron-containing alcohol dehydrogenase 
SynRS9909_RS04745	PF17871	AAA lid domain
SynRS9909_RS04745	PF02861	Clp amino terminal domain, pathogenicity island component
SynRS9909_RS04745	PF07724	AAA domain (Cdc48 subfamily)
SynRS9909_RS04745	PF10431	C-terminal, D2-small domain, of ClpB protein 
SynRS9909_RS04745	PF00004	ATPase family associated with various cellular activities (AAA)
SynRS9909_RS04755	PF00278	Pyridoxal-dependent decarboxylase, C-terminal sheet domain
SynRS9909_RS04755	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
SynRS9909_RS04760	PF02457	DisA bacterial checkpoint controller nucleotide-binding
SynRS9909_RS04765	PF01255	Putative undecaprenyl diphosphate synthase
SynRS9909_RS04770	PF04055	Radical SAM superfamily
SynRS9909_RS04770	PF06968	Biotin and Thiamin Synthesis associated domain
SynRS9909_RS04775	PF17773	UPF0176 acylphosphatase like domain
SynRS9909_RS04795	PF04055	Radical SAM superfamily
SynRS9909_RS04800	PF02132	RecR protein
SynRS9909_RS04800	PF13662	Toprim domain
SynRS9909_RS04835	PF02308	MgtC family
SynRS9909_RS04840	PF03816	Cell envelope-related transcriptional attenuator domain
SynRS9909_RS04845	PF00582	Universal stress protein family
SynRS9909_RS04845	PF00999	Sodium/hydrogen exchanger family
SynRS9909_RS04850	PF00664	ABC transporter transmembrane region
SynRS9909_RS04850	PF00005	ABC transporter
SynRS9909_RS04860	PF00076	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
SynRS9909_RS04875	PF00270	DEAD/DEAH box helicase
SynRS9909_RS04875	PF00271	Helicase conserved C-terminal domain
SynRS9909_RS04875	PF03880	DbpA RNA binding domain   
SynRS9909_RS04885	PF13538	UvrD-like helicase C-terminal domain
SynRS9909_RS04890	PF00580	UvrD/REP helicase N-terminal domain
SynRS9909_RS04890	PF12705	PD-(D/E)XK nuclease superfamily
SynRS9909_RS04890	PF13361	UvrD-like helicase C-terminal domain
SynRS9909_RS04895	PF17946	RecC C-terminal domain
SynRS9909_RS04900	PF00149	Calcineurin-like phosphoesterase
SynRS9909_RS04915	PF10674	Protein of unknown function (DUF2488)
SynRS9909_RS04920	PF03740	Pyridoxal phosphate biosynthesis protein PdxJ
SynRS9909_RS04935	PF01722	BolA-like protein
SynRS9909_RS04940	PF00462	Glutaredoxin
SynRS9909_RS04950	PF00072	Response regulator receiver domain
SynRS9909_RS04950	PF00486	Transcriptional regulatory protein, C terminal
SynRS9909_RS04965	PF05199	GMC oxidoreductase
SynRS9909_RS04975	PF01134	Glucose inhibited division protein A
SynRS9909_RS04980	PF06298	Photosystem II protein Y (PsbY)
SynRS9909_RS04985	PF00132	Bacterial transferase hexapeptide (six repeats)
SynRS9909_RS05025	PF00195	Chalcone and stilbene synthases, N-terminal domain
SynRS9909_RS05025	PF02797	Chalcone and stilbene synthases, C-terminal domain
SynRS9909_RS05030	PF01494	FAD binding domain
SynRS9909_RS05040	PF02136	Nuclear transport factor 2 (NTF2) domain
SynRS9909_RS05040	PF09150	Orange carotenoid protein, N-terminal 
SynRS9909_RS05045	PF00487	Fatty acid desaturase
SynRS9909_RS05055	PF12849	PBP superfamily domain
SynRS9909_RS05065	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
SynRS9909_RS05065	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
SynRS9909_RS05070	PF01022	Bacterial regulatory protein, arsR family
SynRS9909_RS05075	PF01758	Sodium Bile acid symporter family
SynRS9909_RS05080	PF07992	Pyridine nucleotide-disulphide oxidoreductase
SynRS9909_RS05080	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
SynRS9909_RS05085	PF12849	PBP superfamily domain
SynRS9909_RS05090	PF07690	Major Facilitator Superfamily
SynRS9909_RS05100	PF00395	S-layer homology domain
SynRS9909_RS05100	PF04966	Carbohydrate-selective porin, OprB family
SynRS9909_RS05105	PF00072	Response regulator receiver domain
SynRS9909_RS05105	PF00196	Bacterial regulatory proteins, luxR family
SynRS9909_RS05150	PF00565	Staphylococcal nuclease homologue
SynRS9909_RS05170	PF00271	Helicase conserved C-terminal domain
SynRS9909_RS05170	PF00176	SNF2 family N-terminal domain
SynRS9909_RS05220	PF00690	Cation transporter/ATPase, N-terminus
SynRS9909_RS05220	PF00689	Cation transporting ATPase, C-terminus
SynRS9909_RS05230	PF00905	Penicillin binding protein transpeptidase domain
SynRS9909_RS05270	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
SynRS9909_RS05270	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
SynRS9909_RS05310	PF01235	Sodium:alanine symporter family
SynRS9909_RS05320	PF00578	AhpC/TSA family
SynRS9909_RS05320	PF10417	C-terminal domain of 1-Cys peroxiredoxin
SynRS9909_RS05325	PF03699	Uncharacterised protein family (UPF0182)
SynRS9909_RS05330	PF00004	ATPase family associated with various cellular activities (AAA)
SynRS9909_RS05330	PF01434	Peptidase family M41
SynRS9909_RS05330	PF06480	FtsH Extracellular
SynRS9909_RS05330	PF17862	AAA+ lid domain
SynRS9909_RS05335	PF01783	Ribosomal L32p protein family
SynRS9909_RS05350	PF13419	Haloacid dehalogenase-like hydrolase
SynRS9909_RS05355	PF01368	DHH family
SynRS9909_RS05355	PF02272	DHHA1 domain
SynRS9909_RS05355	PF17768	RecJ OB domain
SynRS9909_RS05355	PF10141	Single-strand DNA-specific exonuclease, C terminal domain
SynRS9909_RS05365	PF05969	Photosystem II complex subunit Ycf12
SynRS9909_RS05375	PF01169	Uncharacterized protein family UPF0016
SynRS9909_RS05385	PF17876	Cold shock domain
SynRS9909_RS05385	PF08206	Ribonuclease B OB domain
SynRS9909_RS05385	PF00773	RNB domain
SynRS9909_RS05385	PF00575	S1 RNA binding domain
SynRS9909_RS05390	PF02441	Flavoprotein
SynRS9909_RS05405	PF02915	Rubrerythrin
SynRS9909_RS05410	PF01523	Putative modulator of DNA gyrase
SynRS9909_RS05420	PF00551	Formyl transferase
SynRS9909_RS05420	PF02911	Formyl transferase, C-terminal domain
SynRS9909_RS05425	PF00271	Helicase conserved C-terminal domain
SynRS9909_RS05425	PF00270	DEAD/DEAH box helicase
SynRS9909_RS05440	PF03741	Integral membrane protein TerC family
SynRS9909_RS05455	PF00270	DEAD/DEAH box helicase
SynRS9909_RS05455	PF02559	CarD-like/TRCF domain
SynRS9909_RS05455	PF00271	Helicase conserved C-terminal domain
SynRS9909_RS05455	PF03461	TRCF domain
SynRS9909_RS05455	PF17757	UvrB interaction domain
SynRS9909_RS05465	PF03572	Peptidase family S41
SynRS9909_RS05465	PF00595	PDZ domain
SynRS9909_RS05470	PF04551	GcpE protein
SynRS9909_RS05475	PF03167	Uracil DNA glycosylase superfamily
SynRS9909_RS05480	PF00155	Aminotransferase class I and II
SynRS9909_RS05490	PF03466	LysR substrate binding domain
SynRS9909_RS05490	PF00005	ABC transporter
SynRS9909_RS05495	PF00528	Binding-protein-dependent transport system inner membrane component
SynRS9909_RS05505	PF00140	Sigma-70 factor, region 1.2
SynRS9909_RS05505	PF04542	Sigma-70 region 2 
SynRS9909_RS05505	PF04539	Sigma-70 region 3
SynRS9909_RS05505	PF04545	Sigma-70, region 4
SynRS9909_RS05510	PF01940	Integral membrane protein DUF92
SynRS9909_RS05530	PF00005	ABC transporter
SynRS9909_RS05535	PF01430	Hsp33 protein
SynRS9909_RS05550	PF00009	Elongation factor Tu GTP binding domain
SynRS9909_RS05550	PF16658	Class II release factor RF3, C-terminal domain
SynRS9909_RS05555	PF13649	Methyltransferase domain
SynRS9909_RS05565	PF17975	Ribonucleotide reductase alpha domain
SynRS9909_RS05575	PF14659	Phage integrase, N-terminal SAM-like domain
SynRS9909_RS05575	PF00589	Phage integrase family
SynRS9909_RS05575	PF13356	Arm DNA-binding domain
SynRS9909_RS05660	PF04545	Sigma-70, region 4
SynRS9909_RS05660	PF04539	Sigma-70 region 3
SynRS9909_RS05660	PF04542	Sigma-70 region 2 
SynRS9909_RS05755	PF01381	Helix-turn-helix
SynRS9909_RS05870	PF17375	Family of unknown function (DUF5397)
SynRS9909_RS05875	PF09827	CRISPR associated protein Cas2
SynRS9909_RS05880	PF11663	Toxin with endonuclease activity, of toxin-antitoxin system
SynRS9909_RS05955	PF00293	NUDIX domain
SynRS9909_RS06010	PF00120	Glutamine synthetase, catalytic domain
SynRS9909_RS06010	PF18318	Glutamine synthetase C-terminal domain
SynRS9909_RS06010	PF12437	Glutamine synthetase type III N terminal 
SynRS9909_RS06025	PF03976	Polyphosphate kinase 2 (PPK2)
SynRS9909_RS06030	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SynRS9909_RS06030	PF00672	HAMP domain
SynRS9909_RS06030	PF00512	His Kinase A (phospho-acceptor) domain
SynRS9909_RS06035	PF00486	Transcriptional regulatory protein, C terminal
SynRS9909_RS06035	PF00072	Response regulator receiver domain
SynRS9909_RS06065	PF00156	Phosphoribosyl transferase domain
SynRS9909_RS06075	PF01494	FAD binding domain
SynRS9909_RS06080	PF00762	Ferrochelatase
SynRS9909_RS06090	PF01113	Dihydrodipicolinate reductase, N-terminus
SynRS9909_RS06090	PF05173	Dihydrodipicolinate reductase, C-terminus
SynRS9909_RS06095	PF02514	CobN/Magnesium Chelatase
SynRS9909_RS06095	PF11965	Domain of unknown function (DUF3479)
SynRS9909_RS06100	PF00563	EAL domain
SynRS9909_RS06100	PF00990	Diguanylate cyclase, GGDEF domain
SynRS9909_RS06100	PF13426	PAS domain
SynRS9909_RS06105	PF00809	Pterin binding enzyme
SynRS9909_RS06110	PF00121	Triosephosphate isomerase
SynRS9909_RS06120	PF00664	ABC transporter transmembrane region
SynRS9909_RS06120	PF00005	ABC transporter
SynRS9909_RS06130	PF01235	Sodium:alanine symporter family
SynRS9909_RS06140	PF02142	MGS-like domain
SynRS9909_RS06140	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
SynRS9909_RS06140	PF02787	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
SynRS9909_RS06145	PF11780	Protein of unknown function (DUF3318)
SynRS9909_RS06170	PF01695	IstB-like ATP binding protein
SynRS9909_RS06250	PF07731	Multicopper oxidase
SynRS9909_RS06250	PF07732	Multicopper oxidase
SynRS9909_RS06255	PF13411	MerR HTH family regulatory protein
SynRS9909_RS06295	PF01695	IstB-like ATP binding protein
SynRS9909_RS06300	PF00959	Phage lysozyme
SynRS9909_RS06355	PF07862	Nif11 domain
SynRS9909_RS06360	PF00893	Small Multidrug Resistance protein
SynRS9909_RS06365	PF00893	Small Multidrug Resistance protein
SynRS9909_RS06375	PF00117	Glutamine amidotransferase class-I
SynRS9909_RS06475	PF00732	GMC oxidoreductase
SynRS9909_RS06475	PF05199	GMC oxidoreductase
SynRS9909_RS06485	PF01903	CbiX
SynRS9909_RS06490	PF01740	STAS domain
SynRS9909_RS06490	PF00916	Sulfate permease family
SynRS9909_RS06505	PF00497	Bacterial extracellular solute-binding proteins, family 3
SynRS9909_RS06510	PF00528	Binding-protein-dependent transport system inner membrane component
SynRS9909_RS06520	PF00528	Binding-protein-dependent transport system inner membrane component
SynRS9909_RS06525	PF00005	ABC transporter
SynRS9909_RS06550	PF04204	Homoserine O-succinyltransferase 
SynRS9909_RS06555	PF01053	Cys/Met metabolism PLP-dependent enzyme
SynRS9909_RS06575	PF01636	Phosphotransferase enzyme family
SynRS9909_RS06580	PF00149	Calcineurin-like phosphoesterase
SynRS9909_RS06580	PF12320	Type 5 capsule protein repressor C-terminal domain
SynRS9909_RS06585	PF13175	AAA ATPase domain
SynRS9909_RS06595	PF00043	Glutathione S-transferase, C-terminal domain
SynRS9909_RS06595	PF02798	Glutathione S-transferase, N-terminal domain
SynRS9909_RS06600	PF09506	Glucosylglycerol-phosphate phosphatase (Salt_tol_Pase)
SynRS9909_RS06630	PF01475	Ferric uptake regulator family
SynRS9909_RS06635	PF00149	Calcineurin-like phosphoesterase
SynRS9909_RS06655	PF01243	Pyridoxamine 5'-phosphate oxidase
SynRS9909_RS06655	PF10590	Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region
SynRS9909_RS06665	PF00355	Rieske [2Fe-2S] domain
SynRS9909_RS06670	PF07885	Ion channel
SynRS9909_RS06670	PF17655	Inward rectifier potassium channel C-terminal domain
SynRS9909_RS06705	PF12704	MacB-like periplasmic core domain
SynRS9909_RS06705	PF02687	FtsX-like permease family
SynRS9909_RS06705	PF00005	ABC transporter
SynRS9909_RS06720	PF00124	Photosynthetic reaction centre protein
SynRS9909_RS06740	PF02915	Rubrerythrin
SynRS9909_RS06750	PF11266	Long-chain fatty aldehyde decarbonylase 
SynRS9909_RS06760	PF01126	Heme oxygenase
SynRS9909_RS06765	PF04055	Radical SAM superfamily
SynRS9909_RS06765	PF06969	HemN C-terminal domain
SynRS9909_RS06780	PF00072	Response regulator receiver domain
SynRS9909_RS06785	PF07694	5TMR of 5TMR-LYT
SynRS9909_RS06785	PF06580	Histidine kinase
SynRS9909_RS06810	PF01613	Flavin reductase like domain
SynRS9909_RS06810	PF00258	Flavodoxin
SynRS9909_RS06825	PF01476	LysM domain
SynRS9909_RS06825	PF01551	Peptidase family M23
SynRS9909_RS06825	PF08525	Opacity-associated protein A N-terminal motif
SynRS9909_RS06830	PF00588	SpoU rRNA Methylase family
SynRS9909_RS06840	PF03040	CemA family
SynRS9909_RS06865	PF08264	Anticodon-binding domain of tRNA
SynRS9909_RS06865	PF09334	tRNA synthetases class I (M)
SynRS9909_RS06865	PF00133	tRNA synthetases class I (I, L, M and V)
SynRS9909_RS06880	PF00773	RNB domain
SynRS9909_RS06885	PF01084	Ribosomal protein S18
SynRS9909_RS06890	PF00471	Ribosomal protein L33
SynRS9909_RS06895	PF03147	Ferredoxin-fold anticodon binding domain
SynRS9909_RS06895	PF03483	B3/4 domain
SynRS9909_RS06895	PF17759	Phenylalanyl tRNA synthetase beta chain CLM domain
SynRS9909_RS06895	PF01588	Putative tRNA binding domain
SynRS9909_RS06895	PF03484	tRNA synthetase B5 domain
SynRS9909_RS06900	PF13847	Methyltransferase domain
SynRS9909_RS06905	PF00502	Phycobilisome protein
SynRS9909_RS06925	PF04542	Sigma-70 region 2 
SynRS9909_RS06925	PF04545	Sigma-70, region 4
SynRS9909_RS06935	PF08486	Stage II sporulation protein
SynRS9909_RS06940	PF00106	short chain dehydrogenase
SynRS9909_RS06960	PF02607	B12 binding domain
SynRS9909_RS06960	PF02574	Homocysteine S-methyltransferase
SynRS9909_RS06960	PF00809	Pterin binding enzyme
SynRS9909_RS06960	PF02965	Vitamin B12 dependent methionine synthase, activation domain
SynRS9909_RS06960	PF02310	B12 binding domain
SynRS9909_RS06965	PF01063	Amino-transferase class IV
SynRS9909_RS06970	PF02514	CobN/Magnesium Chelatase
SynRS9909_RS06980	PF02811	PHP domain
SynRS9909_RS06985	PF03653	Uncharacterised protein family (UPF0093)
SynRS9909_RS06990	PF04244	Deoxyribodipyrimidine photo-lyase-related protein
SynRS9909_RS07000	PF02151	UvrB/uvrC motif
SynRS9909_RS07000	PF01541	GIY-YIG catalytic domain
SynRS9909_RS07000	PF08459	UvrC Helix-hairpin-helix N-terminal
SynRS9909_RS07000	PF12826	Helix-hairpin-helix motif
SynRS9909_RS07005	PF01467	Cytidylyltransferase-like
SynRS9909_RS07015	PF02113	D-Ala-D-Ala carboxypeptidase 3 (S13) family
SynRS9909_RS07030	PF00266	Aminotransferase class-V
SynRS9909_RS07035	PF01678	Diaminopimelate epimerase
SynRS9909_RS07045	PF08264	Anticodon-binding domain of tRNA
SynRS9909_RS07045	PF13603	Leucyl-tRNA synthetase, Domain 2
SynRS9909_RS07045	PF09334	tRNA synthetases class I (M)
SynRS9909_RS07045	PF00133	tRNA synthetases class I (I, L, M and V)
SynRS9909_RS07050	PF00342	Phosphoglucose isomerase
SynRS9909_RS07075	PF00551	Formyl transferase
SynRS9909_RS07080	PF02774	Semialdehyde dehydrogenase, dimerisation domain
SynRS9909_RS07080	PF01118	Semialdehyde dehydrogenase, NAD binding domain
SynRS9909_RS07085	PF00926	3,4-dihydroxy-2-butanone 4-phosphate synthase
SynRS9909_RS07085	PF00925	GTP cyclohydrolase II
SynRS9909_RS07090	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
SynRS9909_RS07095	PF01048	Phosphorylase superfamily
SynRS9909_RS07100	PF13580	SIS domain
SynRS9909_RS07110	PF01556	DnaJ C terminal domain
SynRS9909_RS07110	PF00226	DnaJ domain
SynRS9909_RS07115	PF00012	Hsp70 protein
SynRS9909_RS07120	PF00528	Binding-protein-dependent transport system inner membrane component
SynRS9909_RS07125	PF00528	Binding-protein-dependent transport system inner membrane component
SynRS9909_RS07130	PF00005	ABC transporter
SynRS9909_RS07140	PF00111	2Fe-2S iron-sulfur cluster binding domain
SynRS9909_RS07145	PF00459	Inositol monophosphatase family
SynRS9909_RS07150	PF13393	Histidyl-tRNA synthetase
SynRS9909_RS07160	PF00183	Hsp90 protein
SynRS9909_RS07165	PF00830	Ribosomal L28 family
SynRS9909_RS07170	PF00578	AhpC/TSA family
SynRS9909_RS07175	PF00982	Glycosyltransferase family 20
SynRS9909_RS07180	PF01547	Bacterial extracellular solute-binding protein
SynRS9909_RS07185	PF00528	Binding-protein-dependent transport system inner membrane component
SynRS9909_RS07190	PF00528	Binding-protein-dependent transport system inner membrane component
SynRS9909_RS07195	PF08402	TOBE domain
SynRS9909_RS07195	PF00005	ABC transporter
SynRS9909_RS07210	PF01544	CorA-like Mg2+ transporter protein
SynRS9909_RS07215	PF12849	PBP superfamily domain
SynRS9909_RS07230	PF10693	Protein of unknown function (DUF2499)
SynRS9909_RS07240	PF01241	Photosystem I psaG / psaK
SynRS9909_RS07250	PF00585	C-terminal regulatory domain of Threonine dehydratase
SynRS9909_RS07250	PF00291	Pyridoxal-phosphate dependent enzyme
SynRS9909_RS07260	PF02325	YGGT family
SynRS9909_RS07270	PF00391	PEP-utilising enzyme, mobile domain
SynRS9909_RS07270	PF00224	Pyruvate kinase, barrel domain
SynRS9909_RS07270	PF02887	Pyruvate kinase, alpha/beta domain
SynRS9909_RS07275	PF12704	MacB-like periplasmic core domain
SynRS9909_RS07275	PF02687	FtsX-like permease family
SynRS9909_RS07275	PF00005	ABC transporter
SynRS9909_RS07280	PF01434	Peptidase family M41
SynRS9909_RS07280	PF06480	FtsH Extracellular
SynRS9909_RS07280	PF17862	AAA+ lid domain
SynRS9909_RS07280	PF00004	ATPase family associated with various cellular activities (AAA)
SynRS9909_RS07290	PF00574	Clp protease
SynRS9909_RS07295	PF11264	Thylakoid formation protein
SynRS9909_RS07310	PF03742	PetN 
SynRS9909_RS07315	PF02617	ATP-dependent Clp protease adaptor protein ClpS
SynRS9909_RS07320	PF03209	PUCC protein
SynRS9909_RS07340	PF02222	ATP-grasp domain
SynRS9909_RS07340	PF17769	Phosphoribosylaminoimidazole carboxylase C-terminal domain
SynRS9909_RS07345	PF00528	Binding-protein-dependent transport system inner membrane component
SynRS9909_RS07350	PF01761	3-dehydroquinate synthase
SynRS9909_RS07380	PF02445	Quinolinate synthetase A protein
SynRS9909_RS07385	PF04679	ATP dependent DNA ligase C terminal region        
SynRS9909_RS07385	PF01068	ATP dependent DNA ligase domain
SynRS9909_RS07385	PF04675	DNA ligase N terminus
SynRS9909_RS07395	PF04675	DNA ligase N terminus
SynRS9909_RS07395	PF01068	ATP dependent DNA ligase domain
SynRS9909_RS07395	PF04679	ATP dependent DNA ligase C terminal region        
SynRS9909_RS07400	PF08494	DEAD/H associated
SynRS9909_RS07400	PF00270	DEAD/DEAH box helicase
SynRS9909_RS07400	PF00271	Helicase conserved C-terminal domain
SynRS9909_RS07430	PF00005	ABC transporter
SynRS9909_RS07440	PF00395	S-layer homology domain
SynRS9909_RS07440	PF04966	Carbohydrate-selective porin, OprB family
SynRS9909_RS07455	PF00462	Glutaredoxin
SynRS9909_RS07460	PF02254	TrkA-N domain
SynRS9909_RS07460	PF07885	Ion channel
SynRS9909_RS07485	PF03734	L,D-transpeptidase catalytic domain
SynRS9909_RS07485	PF01476	LysM domain
SynRS9909_RS07495	PF00478	IMP dehydrogenase / GMP reductase domain
SynRS9909_RS07495	PF00571	CBS domain
SynRS9909_RS07500	PF01066	CDP-alcohol phosphatidyltransferase
SynRS9909_RS07520	PF00977	Histidine biosynthesis protein
SynRS9909_RS07525	PF01475	Ferric uptake regulator family
SynRS9909_RS07530	PF00072	Response regulator receiver domain
SynRS9909_RS07530	PF12452	Protein of unknown function (DUF3685) 
SynRS9909_RS07550	PF03652	Holliday junction resolvase
SynRS9909_RS07565	PF01472	PUA domain
SynRS9909_RS07565	PF00696	Amino acid kinase family
SynRS9909_RS07570	PF04613	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD  
SynRS9909_RS07570	PF00132	Bacterial transferase hexapeptide (six repeats)
SynRS9909_RS07575	PF00180	Isocitrate/isopropylmalate dehydrogenase
SynRS9909_RS07580	PF00485	Phosphoribulokinase / Uridine kinase family
SynRS9909_RS07590	PF01478	Type IV leader peptidase family
SynRS9909_RS07590	PF06750	Bacterial Peptidase A24 N-terminal domain
SynRS9909_RS07595	PF17848	Acetyl-coA carboxylase zinc finger domain
SynRS9909_RS07595	PF01039	Carboxyl transferase domain
SynRS9909_RS07605	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
SynRS9909_RS07605	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
SynRS9909_RS07610	PF01116	Fructose-bisphosphate aldolase class-II
SynRS9909_RS07615	PF02016	LD-carboxypeptidase N-terminal domain
SynRS9909_RS07615	PF17676	LD-carboxypeptidase C-terminal domain
SynRS9909_RS07625	PF02700	Phosphoribosylformylglycinamidine (FGAM) synthase
SynRS9909_RS07645	PF07683	Cobalamin synthesis protein cobW C-terminal domain
SynRS9909_RS07645	PF02492	CobW/HypB/UreG, nucleotide-binding domain
SynRS9909_RS07665	PF00920	Dehydratase family
SynRS9909_RS07685	PF01182	Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
SynRS9909_RS07690	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
SynRS9909_RS07690	PF00393	6-phosphogluconate dehydrogenase, C-terminal domain
SynRS9909_RS07695	PF00483	Nucleotidyl transferase
SynRS9909_RS07700	PF01488	Shikimate / quinate 5-dehydrogenase
SynRS9909_RS07700	PF05201	Glutamyl-tRNAGlu reductase, N-terminal domain
SynRS9909_RS07700	PF00745	Glutamyl-tRNAGlu reductase, dimerisation domain
SynRS9909_RS07705	PF03320	Bacterial fructose-1,6-bisphosphatase, glpX-encoded
SynRS9909_RS07710	PF00834	Ribulose-phosphate 3 epimerase family
SynRS9909_RS07715	PF01578	Cytochrome C assembly protein
SynRS9909_RS07725	PF00005	ABC transporter
SynRS9909_RS07740	PF00679	Elongation factor G C-terminus
SynRS9909_RS07740	PF14492	Elongation Factor G, domain II
SynRS9909_RS07740	PF03144	Elongation factor Tu domain 2
SynRS9909_RS07740	PF00009	Elongation factor Tu GTP binding domain
SynRS9909_RS07745	PF01136	Peptidase family U32
SynRS9909_RS07745	PF12392	Collagenase 
SynRS9909_RS07755	PF01494	FAD binding domain
SynRS9909_RS07760	PF05746	DALR anticodon binding domain
SynRS9909_RS07760	PF02092	Glycyl-tRNA synthetase beta subunit
SynRS9909_RS07765	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
SynRS9909_RS07765	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
SynRS9909_RS07770	PF01427	D-ala-D-ala dipeptidase
SynRS9909_RS07775	PF17191	RecG wedge domain
SynRS9909_RS07775	PF00270	DEAD/DEAH box helicase
SynRS9909_RS07775	PF00271	Helicase conserved C-terminal domain
SynRS9909_RS07785	PF00889	Elongation factor TS
SynRS9909_RS07790	PF00318	Ribosomal protein S2
SynRS9909_RS07795	PF00535	Glycosyl transferase family 2
SynRS9909_RS07805	PF12704	MacB-like periplasmic core domain
SynRS9909_RS07805	PF02687	FtsX-like permease family
SynRS9909_RS07805	PF00005	ABC transporter
SynRS9909_RS07820	PF05996	Ferredoxin-dependent bilin reductase
SynRS9909_RS07825	PF05193	Peptidase M16 inactive domain
SynRS9909_RS07825	PF00675	Insulinase (Peptidase family M16)
SynRS9909_RS07840	PF02632	BioY family
SynRS9909_RS07845	PF01252	Signal peptidase (SPase) II
SynRS9909_RS07850	PF14814	Bifunctional transglycosylase second domain
SynRS9909_RS07850	PF00905	Penicillin binding protein transpeptidase domain
SynRS9909_RS07850	PF00912	Transglycosylase
SynRS9909_RS07860	PF00282	Pyridoxal-dependent decarboxylase conserved domain
SynRS9909_RS07865	PF14437	MafB19-like deaminase
SynRS9909_RS07870	PF00266	Aminotransferase class-V
SynRS9909_RS07875	PF00502	Phycobilisome protein
SynRS9909_RS07880	PF00120	Glutamine synthetase, catalytic domain
SynRS9909_RS07880	PF03951	Glutamine synthetase, beta-Grasp domain
SynRS9909_RS07890	PF01209	ubiE/COQ5 methyltransferase family
SynRS9909_RS07915	PF16416	ARM-like repeat domain, GUN4-N terminal
SynRS9909_RS07915	PF05419	GUN4-like 
SynRS9909_RS07925	PF03912	Psb28 protein
SynRS9909_RS07930	PF01594	AI-2E family transporter
SynRS9909_RS07950	PF02355	Protein export membrane protein
SynRS9909_RS07955	PF02355	Protein export membrane protein
SynRS9909_RS07955	PF07549	SecD/SecF GG Motif
SynRS9909_RS07960	PF02779	Transketolase, pyrimidine binding domain
SynRS9909_RS07960	PF02780	Transketolase, C-terminal domain
SynRS9909_RS07970	PF08544	GHMP kinases C terminal 
SynRS9909_RS07970	PF00288	GHMP kinases N terminal domain
SynRS9909_RS07975	PF00398	Ribosomal RNA adenine dimethylase
SynRS9909_RS07980	PF00924	Mechanosensitive ion channel
SynRS9909_RS07985	PF02021	Uncharacterised protein family UPF0102
SynRS9909_RS08000	PF02590	Predicted SPOUT methyltransferase
SynRS9909_RS08040	PF13276	HTH-like domain
SynRS9909_RS08040	PF13333	Integrase core domain
SynRS9909_RS08040	PF00665	Integrase core domain
SynRS9909_RS08050	PF12344	Ultra-violet resistance protein B
SynRS9909_RS08050	PF02151	UvrB/uvrC motif
SynRS9909_RS08050	PF04851	Type III restriction enzyme, res subunit
SynRS9909_RS08050	PF00271	Helicase conserved C-terminal domain
SynRS9909_RS08050	PF17757	UvrB interaction domain
SynRS9909_RS08060	PF01230	HIT domain
SynRS9909_RS08085	PF00717	Peptidase S24-like
SynRS9909_RS08090	PF11799	impB/mucB/samB family C-terminal domain
SynRS9909_RS08090	PF13438	Domain of unknown function (DUF4113)
SynRS9909_RS08090	PF00817	impB/mucB/samB family
SynRS9909_RS08095	PF02275	Linear amide C-N hydrolases, choloylglycine hydrolase family
SynRS9909_RS08120	PF10410	DnaB-helicase binding domain of primase
SynRS9909_RS08120	PF08275	DNA primase catalytic core, N-terminal domain
SynRS9909_RS08120	PF01807	CHC2 zinc finger
SynRS9909_RS08135	PF07499	RuvA, C-terminal domain
SynRS9909_RS08135	PF01330	RuvA N terminal domain
SynRS9909_RS08140	PF00312	Ribosomal protein S15
SynRS9909_RS08150	PF14579	Helix-hairpin-helix motif
SynRS9909_RS08150	PF07733	Bacterial DNA polymerase III alpha NTPase domain
SynRS9909_RS08150	PF17657	Bacterial DNA polymerase III alpha subunit finger domain
SynRS9909_RS08150	PF02811	PHP domain
SynRS9909_RS08150	PF01336	OB-fold nucleic acid binding domain
SynRS9909_RS08155	PF01425	Amidase
SynRS9909_RS08165	PF00588	SpoU rRNA Methylase family
SynRS9909_RS08165	PF08032	RNA 2'-O ribose methyltransferase substrate binding
SynRS9909_RS08170	PF00636	Ribonuclease III domain
SynRS9909_RS08175	PF01740	STAS domain
SynRS9909_RS08180	PF00117	Glutamine amidotransferase class-I
SynRS9909_RS08180	PF00988	Carbamoyl-phosphate synthase small chain, CPSase domain
SynRS9909_RS08185	PF02885	Glycosyl transferase family, helical bundle domain
SynRS9909_RS08185	PF00591	Glycosyl transferase family, a/b domain
SynRS9909_RS08190	PF00005	ABC transporter
SynRS9909_RS08190	PF00664	ABC transporter transmembrane region
SynRS9909_RS08200	PF01625	Peptide methionine sulfoxide reductase
SynRS9909_RS08220	PF13545	Crp-like helix-turn-helix domain
SynRS9909_RS08225	PF12849	PBP superfamily domain
SynRS9909_RS08235	PF14579	Helix-hairpin-helix motif
SynRS9909_RS08235	PF07733	Bacterial DNA polymerase III alpha NTPase domain
SynRS9909_RS08235	PF00929	Exonuclease
SynRS9909_RS08235	PF17657	Bacterial DNA polymerase III alpha subunit finger domain
SynRS9909_RS08235	PF02811	PHP domain
SynRS9909_RS08240	PF00578	AhpC/TSA family
SynRS9909_RS08250	PF16177	Acetyl-coenzyme A synthetase N-terminus
SynRS9909_RS08250	PF13193	AMP-binding enzyme C-terminal domain
SynRS9909_RS08250	PF00501	AMP-binding enzyme
SynRS9909_RS08255	PF13419	Haloacid dehalogenase-like hydrolase
SynRS9909_RS08260	PF00348	Polyprenyl synthetase
SynRS9909_RS08265	PF01177	Asp/Glu/Hydantoin racemase
SynRS9909_RS08270	PF01520	N-acetylmuramoyl-L-alanine amidase
SynRS9909_RS08270	PF11741	AMIN domain
SynRS9909_RS08275	PF00795	Carbon-nitrogen hydrolase
SynRS9909_RS08280	PF04029	2-phosphosulpholactate phosphatase
SynRS9909_RS08285	PF01977	3-octaprenyl-4-hydroxybenzoate carboxy-lyase
SynRS9909_RS08290	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
SynRS9909_RS08295	PF01266	FAD dependent oxidoreductase
SynRS9909_RS08295	PF05430	S-adenosyl-L-methionine-dependent methyltransferase
SynRS9909_RS08300	PF12804	MobA-like NTP transferase domain
SynRS9909_RS08300	PF00132	Bacterial transferase hexapeptide (six repeats)
SynRS9909_RS08300	PF14602	Hexapeptide repeat of succinyl-transferase
SynRS9909_RS08305	PF01225	Mur ligase family, catalytic domain
SynRS9909_RS08305	PF02875	Mur ligase family, glutamate ligase domain
SynRS9909_RS08305	PF08245	Mur ligase middle domain
SynRS9909_RS08315	PF00534	Glycosyl transferases group 1
SynRS9909_RS08315	PF08323	Starch synthase catalytic domain
SynRS9909_RS08320	PF03734	L,D-transpeptidase catalytic domain
SynRS9909_RS08320	PF01476	LysM domain
SynRS9909_RS08325	PF00378	Enoyl-CoA hydratase/isomerase
SynRS9909_RS08330	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
SynRS9909_RS08330	PF16582	Middle domain of thiamine pyrophosphate
SynRS9909_RS08330	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
SynRS9909_RS08335	PF10502	Signal peptidase, peptidase S26 
SynRS9909_RS08370	PF00578	AhpC/TSA family
SynRS9909_RS08370	PF10417	C-terminal domain of 1-Cys peroxiredoxin
SynRS9909_RS08400	PF02421	Ferrous iron transport protein B
SynRS9909_RS08400	PF07670	Nucleoside recognition
SynRS9909_RS08400	PF07664	Ferrous iron transport protein B C terminus
SynRS9909_RS08410	PF00210	Ferritin-like domain
SynRS9909_RS08425	PF00005	ABC transporter
SynRS9909_RS08430	PF00950	ABC 3 transport family
SynRS9909_RS08455	PF01850	PIN domain
SynRS9909_RS08470	PF01420	Type I restriction modification DNA specificity domain
SynRS9909_RS08525	PF00072	Response regulator receiver domain
SynRS9909_RS08530	PF06580	Histidine kinase
SynRS9909_RS08530	PF07694	5TMR of 5TMR-LYT
SynRS9909_RS08555	PF00950	ABC 3 transport family
SynRS9909_RS08560	PF04014	Antidote-toxin recognition MazE, bacterial antitoxin
SynRS9909_RS08565	PF00005	ABC transporter
SynRS9909_RS08575	PF04966	Carbohydrate-selective porin, OprB family
SynRS9909_RS08575	PF00395	S-layer homology domain
SynRS9909_RS08580	PF13442	Cytochrome C oxidase, cbb3-type, subunit III 
SynRS9909_RS08585	PF00420	NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
SynRS9909_RS08590	PF00361	Proton-conducting membrane transporter
SynRS9909_RS08630	PF03773	Predicted permease
SynRS9909_RS08635	PF13442	Cytochrome C oxidase, cbb3-type, subunit III 
SynRS9909_RS08660	PF00950	ABC 3 transport family
SynRS9909_RS08670	PF01546	Peptidase family M20/M25/M40
SynRS9909_RS08670	PF07687	Peptidase dimerisation domain
SynRS9909_RS08675	PF00733	Asparagine synthase
SynRS9909_RS08675	PF13537	Glutamine amidotransferase domain
SynRS9909_RS08680	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
SynRS9909_RS08680	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
SynRS9909_RS08685	PF00474	Sodium:solute symporter family
SynRS9909_RS08690	PF18318	Glutamine synthetase C-terminal domain
SynRS9909_RS08690	PF00120	Glutamine synthetase, catalytic domain
SynRS9909_RS08690	PF12437	Glutamine synthetase type III N terminal 
SynRS9909_RS08695	PF00005	ABC transporter
SynRS9909_RS08700	PF01297	Zinc-uptake complex component A periplasmic
SynRS9909_RS08715	PF03649	Uncharacterised protein family (UPF0014)
SynRS9909_RS08740	PF03707	Bacterial signalling protein N terminal repeat
SynRS9909_RS08740	PF00990	Diguanylate cyclase, GGDEF domain
SynRS9909_RS08740	PF00563	EAL domain
SynRS9909_RS08800	PF08240	Alcohol dehydrogenase GroES-like domain
SynRS9909_RS08800	PF00107	Zinc-binding dehydrogenase
SynRS9909_RS08815	PF00355	Rieske [2Fe-2S] domain
SynRS9909_RS08820	PF01062	Bestrophin, RFP-TM, chloride channel
SynRS9909_RS08840	PF01209	ubiE/COQ5 methyltransferase family
SynRS9909_RS08875	PF00633	Helix-hairpin-helix motif
SynRS9909_RS08875	PF10576	Iron-sulfur binding domain of endonuclease III
SynRS9909_RS08875	PF00730	HhH-GPD superfamily base excision DNA repair protein
SynRS9909_RS08910	PF00141	Peroxidase
SynRS9909_RS08920	PF00124	Photosynthetic reaction centre protein
SynRS9909_RS08930	PF01545	Cation efflux family
SynRS9909_RS08930	PF16916	Dimerisation domain of Zinc Transporter
SynRS9909_RS08940	PF00579	tRNA synthetases class I (W and Y)
SynRS9909_RS08960	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
SynRS9909_RS08960	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
SynRS9909_RS08960	PF03129	Anticodon binding domain
SynRS9909_RS08970	PF02685	Glucokinase
SynRS9909_RS08975	PF08544	GHMP kinases C terminal 
SynRS9909_RS08975	PF00288	GHMP kinases N terminal domain
SynRS9909_RS08980	PF00361	Proton-conducting membrane transporter
SynRS9909_RS08985	PF01432	Peptidase family M3
SynRS9909_RS09015	PF02152	Dihydroneopterin aldolase
SynRS9909_RS09020	PF00171	Aldehyde dehydrogenase family
SynRS9909_RS09025	PF00480	ROK family
SynRS9909_RS09060	PF00128	Alpha amylase, catalytic domain
SynRS9909_RS09060	PF02806	Alpha amylase, C-terminal all-beta domain
SynRS9909_RS09060	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
SynRS9909_RS09065	PF01208	Uroporphyrinogen decarboxylase (URO-D)
SynRS9909_RS09075	PF00127	Copper binding proteins, plastocyanin/azurin family
SynRS9909_RS09080	PF13442	Cytochrome C oxidase, cbb3-type, subunit III 
SynRS9909_RS09095	PF00004	ATPase family associated with various cellular activities (AAA)
SynRS9909_RS09095	PF07724	AAA domain (Cdc48 subfamily)
SynRS9909_RS09095	PF10431	C-terminal, D2-small domain, of ClpB protein 
SynRS9909_RS09095	PF02861	Clp amino terminal domain, pathogenicity island component
SynRS9909_RS09095	PF17871	AAA lid domain
SynRS9909_RS09105	PF01502	Phosphoribosyl-AMP cyclohydrolase
SynRS9909_RS09105	PF01503	Phosphoribosyl-ATP pyrophosphohydrolase
SynRS9909_RS09120	PF00140	Sigma-70 factor, region 1.2
SynRS9909_RS09120	PF04542	Sigma-70 region 2 
SynRS9909_RS09120	PF04545	Sigma-70, region 4
SynRS9909_RS09120	PF04539	Sigma-70 region 3
SynRS9909_RS09170	PF00290	Tryptophan synthase alpha chain
SynRS9909_RS09180	PF10716	NADH dehydrogenase transmembrane subunit
SynRS9909_RS09195	PF00732	GMC oxidoreductase
SynRS9909_RS09195	PF00732	GMC oxidoreductase
SynRS9909_RS09195	PF05199	GMC oxidoreductase
SynRS9909_RS09195	PF05199	GMC oxidoreductase
SynRS9909_RS09225	PF01042	Endoribonuclease L-PSP
SynRS9909_RS09240	PF01979	Amidohydrolase family
SynRS9909_RS09245	PF00916	Sulfate permease family
SynRS9909_RS09245	PF01740	STAS domain
SynRS9909_RS09250	PF01699	Sodium/calcium exchanger protein
SynRS9909_RS09265	PF00116	Cytochrome C oxidase subunit II, periplasmic domain
SynRS9909_RS09265	PF02790	Cytochrome C oxidase subunit II, transmembrane domain
SynRS9909_RS09270	PF00115	Cytochrome C and Quinol oxidase polypeptide I
SynRS9909_RS09275	PF00510	Cytochrome c oxidase subunit III
SynRS9909_RS09280	PF05199	GMC oxidoreductase
SynRS9909_RS09280	PF00732	GMC oxidoreductase
SynRS9909_RS09305	PF01618	MotA/TolQ/ExbB proton channel family
SynRS9909_RS09315	PF00581	Rhodanese-like domain
SynRS9909_RS09315	PF11127	Protein of unknown function (DUF2892)
SynRS9909_RS09320	PF16123	Hydroxyacylglutathione hydrolase C-terminus
SynRS9909_RS09320	PF00753	Metallo-beta-lactamase superfamily
SynRS9909_RS09330	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
SynRS9909_RS09330	PF07992	Pyridine nucleotide-disulphide oxidoreductase
SynRS9909_RS09340	PF00502	Phycobilisome protein
SynRS9909_RS09355	PF08299	Bacterial dnaA protein helix-turn-helix
SynRS9909_RS09355	PF00308	Bacterial dnaA  protein
SynRS9909_RS09355	PF11638	DnaA N-terminal domain
SynRS9909_RS09360	PF13180	PDZ domain
SynRS9909_RS09370	PF00535	Glycosyl transferase family 2
SynRS9909_RS09375	PF00583	Acetyltransferase (GNAT) family
SynRS9909_RS09380	PF12697	Alpha/beta hydrolase family
SynRS9909_RS09385	PF00664	ABC transporter transmembrane region
SynRS9909_RS09385	PF00005	ABC transporter
SynRS9909_RS09390	PF01634	ATP phosphoribosyltransferase
SynRS9909_RS09395	PF00753	Metallo-beta-lactamase superfamily
SynRS9909_RS09395	PF16123	Hydroxyacylglutathione hydrolase C-terminus
SynRS9909_RS09400	PF00005	ABC transporter
SynRS9909_RS09400	PF08402	TOBE domain
SynRS9909_RS09405	PF01042	Endoribonuclease L-PSP
SynRS9909_RS09420	PF00004	ATPase family associated with various cellular activities (AAA)
SynRS9909_RS09420	PF17866	AAA lid domain
SynRS9909_RS09435	PF00361	Proton-conducting membrane transporter
SynRS9909_RS09440	PF00361	Proton-conducting membrane transporter
SynRS9909_RS09440	PF01010	NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus
SynRS9909_RS09440	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
SynRS9909_RS09445	PF00936	BMC domain
SynRS9909_RS09475	PF00101	Ribulose bisphosphate carboxylase, small chain
SynRS9909_RS09480	PF02788	Ribulose bisphosphate carboxylase large chain, N-terminal domain
SynRS9909_RS09480	PF00016	Ribulose bisphosphate carboxylase large chain, catalytic domain
SynRS9909_RS09485	PF00936	BMC domain
SynRS9909_RS09490	PF01725	Ham1 family
SynRS9909_RS09510	PF00148	Nitrogenase component 1 type Oxidoreductase
SynRS9909_RS09515	PF08369	Proto-chlorophyllide reductase 57 kD subunit
SynRS9909_RS09515	PF00148	Nitrogenase component 1 type Oxidoreductase
SynRS9909_RS09520	PF00142	4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family
SynRS9909_RS09525	PF00106	short chain dehydrogenase
SynRS9909_RS09535	PF07465	Photosystem I protein M (PsaM)
SynRS9909_RS09545	PF01925	Sulfite exporter TauE/SafE
SynRS9909_RS09550	PF03099	Biotin/lipoate A/B protein ligase family
SynRS9909_RS09555	PF02163	Peptidase family M50
SynRS9909_RS09555	PF00571	CBS domain
SynRS9909_RS09560	PF00697	N-(5'phosphoribosyl)anthranilate (PRA) isomerase
SynRS9909_RS09570	PF01227	GTP cyclohydrolase I
SynRS9909_RS09580	PF03255	Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit
SynRS9909_RS09590	PF11266	Long-chain fatty aldehyde decarbonylase 
SynRS9909_RS09600	PF00575	S1 RNA binding domain
SynRS9909_RS09610	PF02578	Multi-copper polyphenol oxidoreductase laccase
SynRS9909_RS09635	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
SynRS9909_RS09635	PF00205	Thiamine pyrophosphate enzyme, central domain
SynRS9909_RS09635	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
SynRS9909_RS09640	PF00762	Ferrochelatase
SynRS9909_RS09645	PF00589	Phage integrase family
SynRS9909_RS09655	PF12557	Cob(I)alamin adenosyltransferase N terminal 
SynRS9909_RS09655	PF02572	ATP:corrinoid adenosyltransferase BtuR/CobO/CobP
SynRS9909_RS09665	PF00696	Amino acid kinase family
SynRS9909_RS09670	PF01765	Ribosome recycling factor
SynRS9909_RS09675	PF01494	FAD binding domain
SynRS9909_RS09680	PF00875	DNA photolyase
SynRS9909_RS09680	PF03441	FAD binding domain of DNA photolyase
SynRS9909_RS09690	PF00923	Transaldolase/Fructose-6-phosphate aldolase
SynRS9909_RS09690	PF13202	EF hand
SynRS9909_RS09695	PF00905	Penicillin binding protein transpeptidase domain
SynRS9909_RS09695	PF03717	Penicillin-binding Protein dimerisation domain
SynRS9909_RS09710	PF00300	Histidine phosphatase superfamily (branch 1)
SynRS9909_RS09720	PF10502	Signal peptidase, peptidase S26 
SynRS9909_RS09740	PF00719	Inorganic pyrophosphatase
SynRS9909_RS09750	PF04073	Aminoacyl-tRNA editing domain
SynRS9909_RS09750	PF03129	Anticodon binding domain
SynRS9909_RS09750	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
SynRS9909_RS09755	PF13326	Photosystem II Pbs27
SynRS9909_RS09760	PF00709	Adenylosuccinate synthetase
SynRS9909_RS09765	PF00294	pfkB family carbohydrate kinase
SynRS9909_RS09775	PF02571	Precorrin-6x reductase CbiJ/CobK
SynRS9909_RS09790	PF11016	Protein of unknown function (DUF2854)
SynRS9909_RS09795	PF00696	Amino acid kinase family
SynRS9909_RS09805	PF18319	PriA DNA helicase Cys-rich region (CRR) domain
SynRS9909_RS09805	PF18074	Primosomal protein N C-terminal domain
SynRS9909_RS09805	PF00270	DEAD/DEAH box helicase
SynRS9909_RS09805	PF00271	Helicase conserved C-terminal domain
SynRS9909_RS09805	PF17764	3′ DNA-binding domain (3′BD)
SynRS9909_RS09810	PF04545	Sigma-70, region 4
SynRS9909_RS09810	PF00140	Sigma-70 factor, region 1.2
SynRS9909_RS09810	PF04539	Sigma-70 region 3
SynRS9909_RS09810	PF04542	Sigma-70 region 2 
SynRS9909_RS09820	PF03900	Porphobilinogen deaminase, C-terminal domain
SynRS9909_RS09820	PF01379	Porphobilinogen deaminase, dipyromethane cofactor binding domain
SynRS9909_RS09825	PF01914	MarC family integral membrane protein
SynRS9909_RS09835	PF00719	Inorganic pyrophosphatase
SynRS9909_RS09900	PF00561	alpha/beta hydrolase fold
SynRS9909_RS09930	PF00686	Starch binding domain
SynRS9909_RS09930	PF00128	Alpha amylase, catalytic domain
SynRS9909_RS09945	PF01168	Alanine racemase, N-terminal domain
SynRS9909_RS09965	PF01741	Large-conductance mechanosensitive channel, MscL
SynRS9909_RS09975	PF00106	short chain dehydrogenase
SynRS9909_RS10000	PF02696	Uncharacterized ACR, YdiU/UPF0061 family
SynRS9909_RS10010	PF00106	short chain dehydrogenase
SynRS9909_RS10090	PF01451	Low molecular weight phosphotyrosine protein phosphatase
SynRS9909_RS10140	PF02074	Carboxypeptidase Taq (M32) metallopeptidase
SynRS9909_RS10155	PF00850	Histone deacetylase domain
SynRS9909_RS10165	PF01329	Pterin 4 alpha carbinolamine dehydratase
SynRS9909_RS10170	PF02492	CobW/HypB/UreG, nucleotide-binding domain
SynRS9909_RS10170	PF07683	Cobalamin synthesis protein cobW C-terminal domain
SynRS9909_RS10185	PF00528	Binding-protein-dependent transport system inner membrane component
SynRS9909_RS10200	PF00083	Sugar (and other) transporter
SynRS9909_RS10210	PF01969	Protein of unknown function DUF111
SynRS9909_RS10225	PF05420	Cellulose synthase operon protein C C-terminus (BCSC_C)
SynRS9909_RS10235	PF03372	Endonuclease/Exonuclease/phosphatase family
SynRS9909_RS10240	PF01565	FAD binding domain 
SynRS9909_RS10240	PF02913	FAD linked oxidases, C-terminal domain
SynRS9909_RS10245	PF00202	Aminotransferase class-III
SynRS9909_RS10255	PF04461	Protein of unknown function (DUF520)
SynRS9909_RS10265	PF01145	SPFH domain / Band 7 family
SynRS9909_RS10280	PF07085	DRTGG domain
SynRS9909_RS10290	PF00106	short chain dehydrogenase
SynRS9909_RS10295	PF00557	Metallopeptidase family M24
SynRS9909_RS10305	PF01245	Ribosomal protein L19
SynRS9909_RS10330	PF00749	tRNA synthetases class I (E and Q), catalytic domain
SynRS9909_RS10345	PF02350	UDP-N-acetylglucosamine 2-epimerase
SynRS9909_RS10350	PF00437	Type II/IV secretion system protein
SynRS9909_RS10355	PF00762	Ferrochelatase
SynRS9909_RS10360	PF00814	Glycoprotease family
SynRS9909_RS10365	PF02507	Photosystem I reaction centre subunit III
SynRS9909_RS10370	PF01701	Photosystem I reaction centre subunit IX / PsaJ
SynRS9909_RS10375	PF00625	Guanylate kinase
SynRS9909_RS10380	PF05670	NFACT protein RNA binding domain
SynRS9909_RS10385	PF00902	Sec-independent protein translocase protein (TatC)
SynRS9909_RS10395	PF00355	Rieske [2Fe-2S] domain
SynRS9909_RS10400	PF16639	Apocytochrome F, N-terminal
SynRS9909_RS10400	PF01333	Apocytochrome F, C-terminal
SynRS9909_RS10405	PF01790	Prolipoprotein diacylglyceryl transferase
SynRS9909_RS10410	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
SynRS9909_RS10425	PF02541	Ppx/GppA phosphatase family
SynRS9909_RS10430	PF01040	UbiA prenyltransferase family
SynRS9909_RS10440	PF01128	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
SynRS9909_RS10450	PF02254	TrkA-N domain
SynRS9909_RS10450	PF07885	Ion channel
SynRS9909_RS10465	PF00118	TCP-1/cpn60 chaperonin family
SynRS9909_RS10475	PF04131	Putative N-acetylmannosamine-6-phosphate epimerase
SynRS9909_RS10490	PF13732	Domain of unknown function (DUF4162)
SynRS9909_RS10490	PF00005	ABC transporter
SynRS9909_RS10495	PF01040	UbiA prenyltransferase family
SynRS9909_RS10505	PF02790	Cytochrome C oxidase subunit II, transmembrane domain
SynRS9909_RS10505	PF00116	Cytochrome C oxidase subunit II, periplasmic domain
SynRS9909_RS10510	PF00115	Cytochrome C and Quinol oxidase polypeptide I
SynRS9909_RS10515	PF00510	Cytochrome c oxidase subunit III
SynRS9909_RS10530	PF00677	Lumazine binding domain
SynRS9909_RS10565	PF01131	DNA topoisomerase
SynRS9909_RS10565	PF13368	Topoisomerase C-terminal repeat
SynRS9909_RS10565	PF01751	Toprim domain
SynRS9909_RS10570	PF00361	Proton-conducting membrane transporter
SynRS9909_RS10575	PF00005	ABC transporter
SynRS9909_RS10580	PF00072	Response regulator receiver domain
SynRS9909_RS10580	PF00486	Transcriptional regulatory protein, C terminal
SynRS9909_RS10585	PF04225	Opacity-associated protein A LysM-like domain
SynRS9909_RS10585	PF01551	Peptidase family M23
SynRS9909_RS10590	PF02237	Biotin protein ligase C terminal domain
SynRS9909_RS10590	PF03099	Biotin/lipoate A/B protein ligase family
SynRS9909_RS10590	PF08279	HTH domain
SynRS9909_RS10595	PF00155	Aminotransferase class I and II
SynRS9909_RS10600	PF00085	Thioredoxin
SynRS9909_RS10605	PF04012	PspA/IM30 family
SynRS9909_RS10615	PF02366	Dolichyl-phosphate-mannose-protein mannosyltransferase  
SynRS9909_RS10620	PF00534	Glycosyl transferases group 1
SynRS9909_RS10620	PF13439	Glycosyltransferase Family 4
SynRS9909_RS10625	PF00892	EamA-like transporter family
SynRS9909_RS10630	PF01343	Peptidase family S49
SynRS9909_RS10645	PF00468	Ribosomal protein L34
SynRS9909_RS10650	PF00825	Ribonuclease P
SynRS9909_RS10660	PF02096	60Kd inner membrane protein
SynRS9909_RS10670	PF17862	AAA+ lid domain
SynRS9909_RS10670	PF00004	ATPase family associated with various cellular activities (AAA)
SynRS9909_RS10670	PF01434	Peptidase family M41
SynRS9909_RS10670	PF06480	FtsH Extracellular
SynRS9909_RS10680	PF02403	Seryl-tRNA synthetase N-terminal domain
SynRS9909_RS10680	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
SynRS9909_RS10685	PF13180	PDZ domain
SynRS9909_RS10685	PF02163	Peptidase family M50
SynRS9909_RS10690	PF00253	Ribosomal protein S14p/S29e
SynRS9909_RS10695	PF00013	KH domain
SynRS9909_RS10695	PF00575	S1 RNA binding domain
SynRS9909_RS10695	PF03725	3' exoribonuclease family, domain 2
SynRS9909_RS10695	PF01138	3' exoribonuclease family, domain 1
SynRS9909_RS10695	PF03726	Polyribonucleotide nucleotidyltransferase, RNA binding domain
SynRS9909_RS10700	PF00459	Inositol monophosphatase family
SynRS9909_RS10705	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
SynRS9909_RS10730	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
SynRS9909_RS10730	PF00128	Alpha amylase, catalytic domain
SynRS9909_RS10740	PF00216	Bacterial DNA-binding protein
SynRS9909_RS10745	PF00749	tRNA synthetases class I (E and Q), catalytic domain
SynRS9909_RS10760	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
SynRS9909_RS10760	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
SynRS9909_RS10780	PF02405	Permease MlaE
SynRS9909_RS10795	PF02660	Glycerol-3-phosphate acyltransferase
SynRS9909_RS10800	PF00215	Orotidine 5'-phosphate decarboxylase / HUMPS family
SynRS9909_RS10805	PF01479	S4 domain
SynRS9909_RS10805	PF00579	tRNA synthetases class I (W and Y)
SynRS9909_RS10815	PF00072	Response regulator receiver domain
SynRS9909_RS10815	PF00196	Bacterial regulatory proteins, luxR family
SynRS9909_RS10830	PF00883	Cytosol aminopeptidase family, catalytic domain
SynRS9909_RS10830	PF02789	Cytosol aminopeptidase family, N-terminal domain
SynRS9909_RS10845	PF01625	Peptide methionine sulfoxide reductase
SynRS9909_RS10850	PF02684	Lipid-A-disaccharide synthetase
SynRS9909_RS10855	PF13720	Udp N-acetylglucosamine O-acyltransferase; Domain 2
SynRS9909_RS10855	PF00132	Bacterial transferase hexapeptide (six repeats)
SynRS9909_RS10860	PF07977	FabA-like domain
SynRS9909_RS10865	PF03331	UDP-3-O-acyl N-acetylglycosamine deacetylase
SynRS9909_RS10875	PF01259	SAICAR synthetase
SynRS9909_RS10885	PF01071	Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
SynRS9909_RS10885	PF02844	Phosphoribosylglycinamide synthetase, N domain
SynRS9909_RS10885	PF02843	Phosphoribosylglycinamide synthetase, C domain
SynRS9909_RS10890	PF00989	PAS fold
SynRS9909_RS10890	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SynRS9909_RS10890	PF00672	HAMP domain
SynRS9909_RS10890	PF00512	His Kinase A (phospho-acceptor) domain
SynRS9909_RS10895	PF06745	KaiC
SynRS9909_RS10900	PF07689	KaiB domain
SynRS9909_RS10905	PF07688	KaiA C-terminal domain
SynRS9909_RS10910	PF00829	Ribosomal prokaryotic L21 protein
SynRS9909_RS10915	PF01016	Ribosomal L27 protein
SynRS9909_RS10930	PF01509	TruB family pseudouridylate synthase (N terminal domain)
SynRS9909_RS10930	PF16198	tRNA pseudouridylate synthase B C-terminal domain
SynRS9909_RS10935	PF01709	Transcriptional regulator
SynRS9909_RS10940	PF01182	Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
SynRS9909_RS10945	PF08486	Stage II sporulation protein
SynRS9909_RS10950	PF12706	Beta-lactamase superfamily domain
SynRS9909_RS10955	PF14495	Cytochrome c-550 domain
SynRS9909_RS10965	PF00111	2Fe-2S iron-sulfur cluster binding domain
SynRS9909_RS10975	PF01842	ACT domain
SynRS9909_RS10975	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
SynRS9909_RS10975	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
SynRS9909_RS10995	PF02875	Mur ligase family, glutamate ligase domain
SynRS9909_RS10995	PF08245	Mur ligase middle domain
SynRS9909_RS11020	PF01192	RNA polymerase Rpb6 
SynRS9909_RS11030	PF00012	Hsp70 protein
SynRS9909_RS11040	PF02941	Ferredoxin thioredoxin reductase variable alpha chain
SynRS9909_RS11045	PF00156	Phosphoribosyl transferase domain
SynRS9909_RS11050	PF01676	Metalloenzyme superfamily
SynRS9909_RS11050	PF06415	BPG-independent PGAM N-terminus (iPGM_N)
SynRS9909_RS11060	PF00118	TCP-1/cpn60 chaperonin family
SynRS9909_RS11065	PF00166	Chaperonin 10 Kd subunit
SynRS9909_RS11070	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
SynRS9909_RS11070	PF02874	ATP synthase alpha/beta family, beta-barrel domain
SynRS9909_RS11075	PF00401	ATP synthase, Delta/Epsilon chain, long alpha-helix domain
SynRS9909_RS11075	PF02823	ATP synthase, Delta/Epsilon chain, beta-sandwich domain
SynRS9909_RS11080	PF04839	Plastid and cyanobacterial ribosomal protein (PSRP-3 / Ycf65)
SynRS9909_RS11095	PF05195	Aminopeptidase P, N-terminal domain
SynRS9909_RS11095	PF00557	Metallopeptidase family M24
SynRS9909_RS11100	PF01595	Cyclin M transmembrane N-terminal domain
SynRS9909_RS11100	PF00571	CBS domain
SynRS9909_RS11105	PF01926	50S ribosome-binding GTPase
SynRS9909_RS11105	PF12631	MnmE helical domain
SynRS9909_RS11105	PF10396	GTP-binding protein TrmE N-terminus
SynRS9909_RS11110	PF01467	Cytidylyltransferase-like
SynRS9909_RS11115	PF02540	NAD synthase
SynRS9909_RS11115	PF00795	Carbon-nitrogen hydrolase
SynRS9909_RS11120	PF05222	Alanine dehydrogenase/PNT, N-terminal domain
SynRS9909_RS11120	PF01262	Alanine dehydrogenase/PNT, C-terminal domain
SynRS9909_RS11125	PF11805	Protein of unknown function (DUF3326)
SynRS9909_RS11135	PF00111	2Fe-2S iron-sulfur cluster binding domain
SynRS9909_RS11140	PF00231	ATP synthase
SynRS9909_RS11145	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
SynRS9909_RS11145	PF00306	ATP synthase alpha/beta chain, C terminal domain
SynRS9909_RS11145	PF02874	ATP synthase alpha/beta family, beta-barrel domain
SynRS9909_RS11150	PF00213	ATP synthase delta (OSCP) subunit
SynRS9909_RS11155	PF00430	ATP synthase B/B' CF(0)
SynRS9909_RS11160	PF00430	ATP synthase B/B' CF(0)
SynRS9909_RS11165	PF00137	ATP synthase subunit C
SynRS9909_RS11170	PF00119	ATP synthase A chain
SynRS9909_RS11175	PF12966	N-ATPase, AtpR subunit 
SynRS9909_RS11180	PF13847	Methyltransferase domain
SynRS9909_RS11185	PF00502	Phycobilisome protein
SynRS9909_RS11185	PF00427	Phycobilisome Linker polypeptide
SynRS9909_RS11190	PF00502	Phycobilisome protein
SynRS9909_RS11195	PF00502	Phycobilisome protein
SynRS9909_RS11200	PF01383	CpcD/allophycocyanin linker domain
SynRS9909_RS11205	PF01098	Cell cycle protein
SynRS9909_RS11215	PF05140	ResB-like family 
SynRS9909_RS11220	PF14489	QueF-like protein
SynRS9909_RS11235	PF00543	Nitrogen regulatory protein P-II
SynRS9909_RS11240	PF01479	S4 domain
SynRS9909_RS11240	PF01728	FtsJ-like methyltransferase
SynRS9909_RS11250	PF10397	Adenylosuccinate lyase C-terminus
SynRS9909_RS11250	PF00206	Lyase
SynRS9909_RS11260	PF10415	Fumarase C C-terminus
SynRS9909_RS11260	PF00206	Lyase
SynRS9909_RS11265	PF00271	Helicase conserved C-terminal domain
SynRS9909_RS11265	PF08148	DSHCT (NUC185) domain
SynRS9909_RS11265	PF00270	DEAD/DEAH box helicase
SynRS9909_RS11270	PF01758	Sodium Bile acid symporter family
SynRS9909_RS11275	PF00155	Aminotransferase class I and II
SynRS9909_RS11290	PF13649	Methyltransferase domain
SynRS9909_RS11310	PF00226	DnaJ domain
SynRS9909_RS11310	PF01556	DnaJ C terminal domain
SynRS9909_RS11310	PF00684	DnaJ central domain
SynRS9909_RS11315	PF02527	rRNA small subunit methyltransferase G
SynRS9909_RS11345	PF07690	Major Facilitator Superfamily
SynRS9909_RS11350	PF04055	Radical SAM superfamily
SynRS9909_RS11360	PF04998	RNA polymerase Rpb1, domain 5
SynRS9909_RS11360	PF04983	RNA polymerase Rpb1, domain 3
SynRS9909_RS11360	PF05000	RNA polymerase Rpb1, domain 4
SynRS9909_RS11365	PF00623	RNA polymerase Rpb1, domain 2
SynRS9909_RS11365	PF04983	RNA polymerase Rpb1, domain 3
SynRS9909_RS11365	PF04997	RNA polymerase Rpb1, domain 1
SynRS9909_RS11370	PF04560	RNA polymerase Rpb2, domain 7
SynRS9909_RS11370	PF00562	RNA polymerase Rpb2, domain 6
SynRS9909_RS11370	PF04565	RNA polymerase Rpb2, domain 3
SynRS9909_RS11370	PF10385	RNA polymerase beta subunit external 1 domain
SynRS9909_RS11370	PF04563	RNA polymerase beta subunit
SynRS9909_RS11370	PF04561	RNA polymerase Rpb2, domain 2
SynRS9909_RS11375	PF01026	TatD related DNase
SynRS9909_RS11380	PF01649	Ribosomal protein S20
SynRS9909_RS11385	PF00815	Histidinol dehydrogenase
SynRS9909_RS11390	PF06026	Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
SynRS9909_RS11395	PF13180	PDZ domain
SynRS9909_RS11410	PF00924	Mechanosensitive ion channel
SynRS9909_RS11415	PF00704	Glycosyl hydrolases family 18
SynRS9909_RS11415	PF00041	Fibronectin type III domain
SynRS9909_RS11425	PF04055	Radical SAM superfamily
SynRS9909_RS11430	PF02576	RimP N-terminal domain
SynRS9909_RS11435	PF08529	NusA N-terminal domain
SynRS9909_RS11435	PF00575	S1 RNA binding domain
SynRS9909_RS11435	PF13184	NusA-like KH domain
SynRS9909_RS11445	PF00009	Elongation factor Tu GTP binding domain
SynRS9909_RS11445	PF11987	Translation-initiation factor 2
SynRS9909_RS11445	PF04760	Translation initiation factor IF-2, N-terminal region
SynRS9909_RS11465	PF00124	Photosynthetic reaction centre protein
SynRS9909_RS11490	PF04952	Succinylglutamate desuccinylase / Aspartoacylase family
SynRS9909_RS11495	PF13409	Glutathione S-transferase, N-terminal domain
SynRS9909_RS11505	PF16326	ABC transporter C-terminal domain
SynRS9909_RS11505	PF12848	ABC transporter
SynRS9909_RS11505	PF00005	ABC transporter
SynRS9909_RS11525	PF01926	50S ribosome-binding GTPase
SynRS9909_RS11525	PF01018	GTP1/OBG
SynRS9909_RS11530	PF17912	MalK OB fold domain
SynRS9909_RS11530	PF00005	ABC transporter
SynRS9909_RS11535	PF00488	MutS domain V
SynRS9909_RS11535	PF01713	Smr domain
SynRS9909_RS11545	PF16576	Barrel-sandwich domain of CusB or HlyD membrane-fusion
SynRS9909_RS11565	PF00490	Delta-aminolevulinic acid dehydratase
SynRS9909_RS11570	PF00226	DnaJ domain
SynRS9909_RS11570	PF01556	DnaJ C terminal domain
SynRS9909_RS11580	PF01740	STAS domain
SynRS9909_RS11580	PF00916	Sulfate permease family
SynRS9909_RS11600	PF02926	THUMP domain
SynRS9909_RS11600	PF01170	Putative RNA methylase family UPF0020
SynRS9909_RS11620	PF06470	SMC proteins Flexible Hinge Domain
SynRS9909_RS11620	PF02463	RecF/RecN/SMC N terminal domain
SynRS9909_RS11630	PF01641	SelR domain
SynRS9909_RS11645	PF02785	Biotin carboxylase C-terminal domain
SynRS9909_RS11645	PF00289	Biotin carboxylase, N-terminal domain
SynRS9909_RS11645	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
SynRS9909_RS11655	PF06596	Photosystem II reaction centre X protein (PsbX)
SynRS9909_RS11660	PF07444	Ycf66 protein N-terminus
SynRS9909_RS11675	PF00762	Ferrochelatase
SynRS9909_RS11680	PF06472	ABC transporter transmembrane region 2
SynRS9909_RS11680	PF00005	ABC transporter
SynRS9909_RS11685	PF01230	HIT domain
SynRS9909_RS11690	PF01078	Magnesium chelatase, subunit ChlI
SynRS9909_RS11690	PF13335	Magnesium chelatase, subunit ChlI C-terminal
SynRS9909_RS11700	PF01165	Ribosomal protein S21
SynRS9909_RS11715	PF01327	Polypeptide deformylase
SynRS9909_RS11720	PF00326	Prolyl oligopeptidase family
SynRS9909_RS11725	PF00596	Class II Aldolase and Adducin N-terminal domain
SynRS9909_RS11730	PF01008	Initiation factor 2 subunit family
SynRS9909_RS11740	PF00266	Aminotransferase class-V
SynRS9909_RS11745	PF01458	Uncharacterized protein family (UPF0051)
SynRS9909_RS11750	PF00005	ABC transporter
SynRS9909_RS11755	PF01458	Uncharacterized protein family (UPF0051)
SynRS9909_RS11760	PF02943	Ferredoxin thioredoxin reductase catalytic beta chain
SynRS9909_RS11765	PF01791	DeoC/LacD family aldolase
SynRS9909_RS11780	PF09367	CpeS-like protein
SynRS9909_RS11785	PF00427	Phycobilisome Linker polypeptide
SynRS9909_RS11800	PF13091	PLD-like domain
SynRS9909_RS11805	PF01850	PIN domain
SynRS9909_RS11810	PF09957	Bacterial antitoxin of type II TA system, VapB
SynRS9909_RS11815	PF02604	Antitoxin Phd_YefM, type II toxin-antitoxin system
SynRS9909_RS11820	PF01850	PIN domain
SynRS9909_RS11860	PF13181	Tetratricopeptide repeat
SynRS9909_RS11875	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
SynRS9909_RS11875	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
SynRS9909_RS11875	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
SynRS9909_RS11875	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
SynRS9909_RS11885	PF00873	AcrB/AcrD/AcrF family
SynRS9909_RS11895	PF00004	ATPase family associated with various cellular activities (AAA)
SynRS9909_RS11895	PF16193	AAA C-terminal domain
SynRS9909_RS11895	PF12002	MgsA AAA+ ATPase C terminal
SynRS9909_RS11915	PF00578	AhpC/TSA family
SynRS9909_RS11920	PF03309	Type III pantothenate kinase
SynRS9909_RS11925	PF01507	Phosphoadenosine phosphosulfate reductase family
SynRS9909_RS11930	PF07992	Pyridine nucleotide-disulphide oxidoreductase
SynRS9909_RS11935	PF13167	GTP-binding GTPase N-terminal
SynRS9909_RS11935	PF01926	50S ribosome-binding GTPase
SynRS9909_RS11935	PF16360	GTP-binding GTPase Middle Region
SynRS9909_RS11940	PF02080	TrkA-C domain
SynRS9909_RS11940	PF03600	Citrate transporter
SynRS9909_RS11945	PF02386	Cation transport protein
SynRS9909_RS11950	PF02080	TrkA-C domain
SynRS9909_RS11950	PF02254	TrkA-N domain
SynRS9909_RS11955	PF03702	Anhydro-N-acetylmuramic acid kinase
SynRS9909_RS11975	PF00005	ABC transporter
SynRS9909_RS11975	PF16326	ABC transporter C-terminal domain
SynRS9909_RS11975	PF12848	ABC transporter
SynRS9909_RS11985	PF13180	PDZ domain
SynRS9909_RS12000	PF00271	Helicase conserved C-terminal domain
SynRS9909_RS12000	PF00270	DEAD/DEAH box helicase
SynRS9909_RS12000	PF08482	ATP-dependent helicase C-terminal
SynRS9909_RS12000	PF04408	Helicase associated domain (HA2)
SynRS9909_RS12005	PF00762	Ferrochelatase
SynRS9909_RS12015	PF13742	OB-fold nucleic acid binding domain
SynRS9909_RS12015	PF02601	Exonuclease VII, large subunit
SynRS9909_RS12065	PF00459	Inositol monophosphatase family
SynRS9909_RS12080	PF02673	Bacitracin resistance protein BacA
SynRS9909_RS12090	PF06514	Photosystem II 12 kDa extrinsic protein (PsbU)
SynRS9909_RS12095	PF02910	Fumarate reductase flavoprotein C-term
SynRS9909_RS12095	PF00890	FAD binding domain
SynRS9909_RS12100	PF07884	Vitamin K epoxide reductase family
SynRS9909_RS12105	PF00919	Uncharacterized protein family UPF0004
SynRS9909_RS12105	PF18693	TRAM domain
SynRS9909_RS12105	PF04055	Radical SAM superfamily
SynRS9909_RS12110	PF07690	Major Facilitator Superfamily
SynRS9909_RS12120	PF04055	Radical SAM superfamily
SynRS9909_RS12120	PF13282	Domain of unknown function (DUF4070)
SynRS9909_RS12120	PF02310	B12 binding domain
SynRS9909_RS12150	PF01202	Shikimate kinase
SynRS9909_RS12175	PF02033	Ribosome-binding factor A
SynRS9909_RS12180	PF00933	Glycosyl hydrolase family 3 N terminal domain
SynRS9909_RS12180	PF01915	Glycosyl hydrolase family 3 C-terminal domain
SynRS9909_RS12185	PF13181	Tetratricopeptide repeat
SynRS9909_RS12185	PF00535	Glycosyl transferase family 2
SynRS9909_RS12190	PF02602	Uroporphyrinogen-III synthase HemD
SynRS9909_RS12205	PF01593	Flavin containing amine oxidoreductase
SynRS9909_RS12210	PF01521	Iron-sulphur cluster biosynthesis
SynRS9909_RS12230	PF01370	NAD dependent epimerase/dehydratase family
SynRS9909_RS12230	PF08338	Domain of unknown function (DUF1731)
SynRS9909_RS12235	PF02080	TrkA-C domain
SynRS9909_RS12235	PF00999	Sodium/hydrogen exchanger family
SynRS9909_RS12235	PF03471	Transporter associated domain
SynRS9909_RS12240	PF11910	Cyanobacterial and plant NDH-1 subunit O
SynRS9909_RS12250	PF00226	DnaJ domain
SynRS9909_RS12250	PF00684	DnaJ central domain
SynRS9909_RS12250	PF01556	DnaJ C terminal domain
SynRS9909_RS12255	PF00291	Pyridoxal-phosphate dependent enzyme
SynRS9909_RS12260	PF04966	Carbohydrate-selective porin, OprB family
SynRS9909_RS12260	PF00395	S-layer homology domain
SynRS9909_RS12265	PF00395	S-layer homology domain
SynRS9909_RS12265	PF04966	Carbohydrate-selective porin, OprB family
SynRS9909_RS12270	PF00395	S-layer homology domain
SynRS9909_RS12270	PF04966	Carbohydrate-selective porin, OprB family
SynRS9909_RS12285	PF00124	Photosynthetic reaction centre protein
SynRS9909_RS12295	PF00005	ABC transporter
SynRS9909_RS12305	PF00486	Transcriptional regulatory protein, C terminal
SynRS9909_RS12305	PF00072	Response regulator receiver domain
SynRS9909_RS12310	PF09115	DNA polymerase III, delta subunit, C terminal
SynRS9909_RS12315	PF02223	Thymidylate kinase
SynRS9909_RS12320	PF00403	Heavy-metal-associated domain
SynRS9909_RS12330	PF06745	KaiC
SynRS9909_RS12330	PF18073	Rubredoxin metal binding domain
SynRS9909_RS12335	PF00486	Transcriptional regulatory protein, C terminal
SynRS9909_RS12335	PF00072	Response regulator receiver domain
SynRS9909_RS12340	PF02504	Fatty acid synthesis protein
SynRS9909_RS12345	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal  
SynRS9909_RS12345	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
SynRS9909_RS12350	PF00698	Acyl transferase domain
SynRS9909_RS12355	PF01553	Acyltransferase
SynRS9909_RS12355	PF00501	AMP-binding enzyme
SynRS9909_RS12365	PF00814	Glycoprotease family
SynRS9909_RS12375	PF01743	Poly A polymerase head domain
SynRS9909_RS12375	PF12627	Probable RNA and SrmB- binding site of polymerase A
SynRS9909_RS12375	PF13735	tRNA nucleotidyltransferase domain 2 putative
SynRS9909_RS12390	PF01593	Flavin containing amine oxidoreductase
SynRS9909_RS12395	PF10664	Cyanobacterial and plastid NDH-1 subunit M
SynRS9909_RS12405	PF03466	LysR substrate binding domain
SynRS9909_RS12405	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SynRS9909_RS12415	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
SynRS9909_RS12415	PF00361	Proton-conducting membrane transporter
SynRS9909_RS12415	PF01010	NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus
SynRS9909_RS12420	PF00361	Proton-conducting membrane transporter
SynRS9909_RS12430	PF00483	Nucleotidyl transferase
SynRS9909_RS12440	PF00072	Response regulator receiver domain
SynRS9909_RS12440	PF00196	Bacterial regulatory proteins, luxR family
SynRS9909_RS12445	PF01928	CYTH domain
SynRS9909_RS12450	PF01513	ATP-NAD kinase
SynRS9909_RS12455	PF00420	NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
SynRS9909_RS12460	PF00499	NADH-ubiquinone/plastoquinone oxidoreductase chain 6
SynRS9909_RS12465	PF13237	4Fe-4S dicluster domain
SynRS9909_RS12470	PF00146	NADH dehydrogenase
SynRS9909_RS12475	PF00285	Citrate synthase, C-terminal domain
SynRS9909_RS12480	PF00300	Histidine phosphatase superfamily (branch 1)
SynRS9909_RS12495	PF01628	HrcA protein C terminal domain
SynRS9909_RS12500	PF00291	Pyridoxal-phosphate dependent enzyme
SynRS9909_RS12505	PF01253	Translation initiation factor SUI1
SynRS9909_RS12515	PF01594	AI-2E family transporter
SynRS9909_RS12520	PF00731	AIR carboxylase
SynRS9909_RS12530	PF07109	Magnesium-protoporphyrin IX methyltransferase C-terminus
SynRS9909_RS12535	PF00849	RNA pseudouridylate synthase
SynRS9909_RS12540	PF00072	Response regulator receiver domain
SynRS9909_RS12540	PF00486	Transcriptional regulatory protein, C terminal
SynRS9909_RS12550	PF00266	Aminotransferase class-V
SynRS9909_RS12570	PF01795	MraW methylase family
SynRS9909_RS12575	PF00346	Respiratory-chain NADH dehydrogenase, 49 Kd subunit
SynRS9909_RS12590	PF13193	AMP-binding enzyme C-terminal domain
SynRS9909_RS12590	PF00501	AMP-binding enzyme
SynRS9909_RS12595	PF13378	Enolase C-terminal domain-like
SynRS9909_RS12595	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
SynRS9909_RS12600	PF01040	UbiA prenyltransferase family
SynRS9909_RS12605	PF00425	chorismate binding enzyme
SynRS9909_RS12610	PF02951	Prokaryotic glutathione synthetase, N-terminal domain
SynRS9909_RS12610	PF02955	Prokaryotic glutathione synthetase, ATP-grasp domain
SynRS9909_RS12615	PF00462	Glutaredoxin
SynRS9909_RS12630	PF02130	Uncharacterized protein family UPF0054
SynRS9909_RS12635	PF01219	Prokaryotic diacylglycerol kinase
SynRS9909_RS12640	PF00117	Glutamine amidotransferase class-I
SynRS9909_RS12650	PF17763	Glutaminase/Asparaginase C-terminal domain
SynRS9909_RS12650	PF00710	Asparaginase, N-terminal
SynRS9909_RS12655	PF00155	Aminotransferase class I and II
SynRS9909_RS12665	PF00750	tRNA synthetases class I (R)
SynRS9909_RS12665	PF03485	Arginyl tRNA synthetase N terminal domain
SynRS9909_RS12665	PF05746	DALR anticodon binding domain
SynRS9909_RS12685	PF02749	Quinolinate phosphoribosyl transferase, N-terminal domain
SynRS9909_RS12685	PF01729	Quinolinate phosphoribosyl transferase, C-terminal domain
SynRS9909_RS12695	PF01926	50S ribosome-binding GTPase
SynRS9909_RS12695	PF12631	MnmE helical domain
SynRS9909_RS12695	PF10396	GTP-binding protein TrmE N-terminus
SynRS9909_RS12720	PF13649	Methyltransferase domain
SynRS9909_RS12725	PF00027	Cyclic nucleotide-binding domain
SynRS9909_RS12725	PF13545	Crp-like helix-turn-helix domain
SynRS9909_RS12730	PF04607	Region found in RelA / SpoT proteins
SynRS9909_RS12730	PF13291	ACT domain
SynRS9909_RS12730	PF02824	TGS domain
SynRS9909_RS12735	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
SynRS9909_RS12735	PF00005	ABC transporter
SynRS9909_RS12740	PF00196	Bacterial regulatory proteins, luxR family
SynRS9909_RS12740	PF00072	Response regulator receiver domain
SynRS9909_RS12745	PF00150	Cellulase (glycosyl hydrolase family 5)
SynRS9909_RS12745	PF00553	Cellulose binding domain
SynRS9909_RS12745	PF00041	Fibronectin type III domain
SynRS9909_RS12755	PF01479	S4 domain
SynRS9909_RS12755	PF00849	RNA pseudouridylate synthase
SynRS9909_RS12760	PF01926	50S ribosome-binding GTPase
SynRS9909_RS12765	PF00582	Universal stress protein family
SynRS9909_RS12770	PF00162	Phosphoglycerate kinase
SynRS9909_RS12785	PF04101	Glycosyltransferase family 28 C-terminal domain
SynRS9909_RS12785	PF03033	Glycosyltransferase family 28 N-terminal domain
SynRS9909_RS12820	PF00155	Aminotransferase class I and II
SynRS9909_RS12840	PF03958	Bacterial type II/III secretion system short domain
SynRS9909_RS12840	PF00263	Bacterial type II and III secretion system protein
SynRS9909_RS12855	PF01180	Dihydroorotate dehydrogenase
SynRS9909_RS12870	PF16320	Ribosomal protein L7/L12 dimerisation domain
SynRS9909_RS12870	PF00542	Ribosomal protein L7/L12 C-terminal domain
SynRS9909_RS12875	PF00466	Ribosomal protein L10
SynRS9909_RS12880	PF00687	Ribosomal protein L1p/L10e family
SynRS9909_RS12885	PF00298	Ribosomal protein L11, RNA binding domain
SynRS9909_RS12885	PF03946	Ribosomal protein L11, N-terminal domain
SynRS9909_RS12890	PF02357	Transcription termination factor nusG
SynRS9909_RS12890	PF00467	KOW motif
SynRS9909_RS12895	PF00584	SecE/Sec61-gamma subunits of protein translocation complex
SynRS9909_RS12900	PF00004	ATPase family associated with various cellular activities (AAA)
SynRS9909_RS12900	PF07724	AAA domain (Cdc48 subfamily)
SynRS9909_RS12900	PF17871	AAA lid domain
SynRS9909_RS12900	PF02861	Clp amino terminal domain, pathogenicity island component
SynRS9909_RS12900	PF10431	C-terminal, D2-small domain, of ClpB protein 
SynRS9909_RS12905	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
SynRS9909_RS12910	PF00113	Enolase, C-terminal TIM barrel domain
SynRS9909_RS12910	PF03952	Enolase, N-terminal domain
SynRS9909_RS12925	PF03109	ABC1 family
SynRS9909_RS12940	PF01960	ArgJ family
SynRS9909_RS12945	PF01121	Dephospho-CoA kinase
SynRS9909_RS12965	PF02637	GatB domain
SynRS9909_RS12965	PF02934	GatB/GatE catalytic domain
SynRS9909_RS12970	PF05690	Thiazole biosynthesis protein ThiG
SynRS9909_RS12970	PF01266	FAD dependent oxidoreductase
SynRS9909_RS12975	PF00334	Nucleoside diphosphate kinase
SynRS9909_RS12990	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
SynRS9909_RS12990	PF17944	Arginine decarboxylase C-terminal helical extension
SynRS9909_RS12990	PF17810	Arginine decarboxylase helical bundle domain
SynRS9909_RS13000	PF00211	Adenylate and Guanylate cyclase catalytic domain
SynRS9909_RS13035	PF01411	tRNA synthetases class II (A)
SynRS9909_RS13035	PF02272	DHHA1 domain
SynRS9909_RS13035	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
SynRS9909_RS13045	PF00271	Helicase conserved C-terminal domain
SynRS9909_RS13045	PF12419	SNF2 Helicase protein 
SynRS9909_RS13045	PF00176	SNF2 family N-terminal domain
SynRS9909_RS13060	PF00011	Hsp20/alpha crystallin family
SynRS9909_RS13070	PF01613	Flavin reductase like domain
SynRS9909_RS13070	PF00753	Metallo-beta-lactamase superfamily
SynRS9909_RS13075	PF00258	Flavodoxin
SynRS9909_RS13075	PF01613	Flavin reductase like domain
SynRS9909_RS13080	PF00301	Rubredoxin
SynRS9909_RS13090	PF02678	Pirin
SynRS9909_RS13090	PF17954	Quercetinase C-terminal cupin domain
SynRS9909_RS13105	PF02347	Glycine cleavage system P-protein
SynRS9909_RS13110	PF01597	Glycine cleavage H-protein
SynRS9909_RS13115	PF06838	Methionine gamma-lyase 
SynRS9909_RS13135	PF03948	Ribosomal protein L9, C-terminal domain
SynRS9909_RS13135	PF01281	Ribosomal protein L9, N-terminal domain
SynRS9909_RS13140	PF00772	DnaB-like helicase N terminal domain
SynRS9909_RS13140	PF03796	DnaB-like helicase C terminal domain
SynRS9909_RS13140	PF14528	LAGLIDADG-like domain
SynRS9909_RS13140	PF00772	DnaB-like helicase N terminal domain
SynRS9909_RS13140	PF14528	LAGLIDADG-like domain
SynRS9909_RS13140	PF03796	DnaB-like helicase C terminal domain
SynRS9909_RS13155	PF13932	GidA associated domain
SynRS9909_RS13155	PF01134	Glucose inhibited division protein A
SynRS9909_RS13195	PF03120	NAD-dependent DNA ligase OB-fold domain
SynRS9909_RS13195	PF03119	NAD-dependent DNA ligase C4 zinc finger domain
SynRS9909_RS13195	PF12826	Helix-hairpin-helix motif
SynRS9909_RS13195	PF01653	NAD-dependent DNA ligase adenylation domain
SynRS9909_RS13195	PF00533	BRCA1 C Terminus (BRCT) domain
SynRS9909_RS13210	PF09335	SNARE associated Golgi protein
SynRS9909_RS13215	PF00924	Mechanosensitive ion channel
SynRS9909_RS13225	PF10458	Valyl tRNA synthetase tRNA binding arm
SynRS9909_RS13225	PF00133	tRNA synthetases class I (I, L, M and V)
SynRS9909_RS13225	PF08264	Anticodon-binding domain of tRNA
SynRS9909_RS13235	PF00924	Mechanosensitive ion channel
SynRS9909_RS13235	PF12794	Mechanosensitive ion channel inner membrane domain 1
SynRS9909_RS13235	PF12795	Mechanosensitive ion channel porin domain
SynRS9909_RS13255	PF00106	short chain dehydrogenase
SynRS9909_RS13275	PF03819	MazG nucleotide pyrophosphohydrolase domain
SynRS9909_RS13280	PF01738	Dienelactone hydrolase family
SynRS9909_RS13285	PF03462	PCRF domain
SynRS9909_RS13285	PF00472	RF-1 domain
SynRS9909_RS13295	PF17284	Spermidine synthase tetramerisation domain
SynRS9909_RS13300	PF00491	Arginase family
SynRS9909_RS13315	PF01571	Aminomethyltransferase folate-binding domain
SynRS9909_RS13315	PF08669	Glycine cleavage T-protein C-terminal barrel domain
SynRS9909_RS13320	PF01336	OB-fold nucleic acid binding domain
SynRS9909_RS13320	PF02938	GAD domain
SynRS9909_RS13320	PF00152	tRNA synthetases class II (D, K and N) 
SynRS9909_RS13325	PF00140	Sigma-70 factor, region 1.2
SynRS9909_RS13325	PF04542	Sigma-70 region 2 
SynRS9909_RS13325	PF04539	Sigma-70 region 3
SynRS9909_RS13325	PF04545	Sigma-70, region 4
SynRS9909_RS13330	PF00210	Ferritin-like domain
SynRS9909_RS13335	PF06418	CTP synthase N-terminus
SynRS9909_RS13335	PF00117	Glutamine amidotransferase class-I
SynRS9909_RS13340	PF04055	Radical SAM superfamily
SynRS9909_RS13350	PF03974	Ecotin
SynRS9909_RS13355	PF06508	Queuosine biosynthesis protein QueC
SynRS9909_RS13360	PF04715	Anthranilate synthase component I, N terminal region
SynRS9909_RS13360	PF00425	chorismate binding enzyme
SynRS9909_RS13370	PF13520	Amino acid permease
SynRS9909_RS13380	PF00005	ABC transporter
SynRS9909_RS13385	PF00005	ABC transporter
SynRS9909_RS13385	PF12399	Branched-chain amino acid ATP-binding cassette transporter
SynRS9909_RS13395	PF02653	Branched-chain amino acid transport system / permease component
SynRS9909_RS13400	PF13458	Periplasmic binding protein
SynRS9909_RS13405	PF02492	CobW/HypB/UreG, nucleotide-binding domain
SynRS9909_RS13410	PF01730	UreF
SynRS9909_RS13415	PF05194	UreE urease accessory protein, C-terminal domain
SynRS9909_RS13420	PF01774	UreD urease accessory protein
SynRS9909_RS13425	PF00547	Urease, gamma subunit
SynRS9909_RS13430	PF00699	Urease beta subunit
SynRS9909_RS13435	PF00449	Urease alpha-subunit, N-terminal domain
SynRS9909_RS13435	PF01979	Amidohydrolase family
SynRS9909_RS13440	PF00958	GMP synthase C terminal domain
SynRS9909_RS13440	PF02540	NAD synthase
SynRS9909_RS13440	PF00117	Glutamine amidotransferase class-I
SynRS9909_RS13460	PF01546	Peptidase family M20/M25/M40
SynRS9909_RS13465	PF00733	Asparagine synthase
SynRS9909_RS13465	PF13537	Glutamine amidotransferase domain
SynRS9909_RS13470	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
SynRS9909_RS13470	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
SynRS9909_RS13475	PF00474	Sodium:solute symporter family
SynRS9909_RS13480	PF14403	Circularly permuted ATP-grasp type 2 
SynRS9909_RS13500	PF06463	Molybdenum Cofactor Synthesis C
SynRS9909_RS13500	PF04055	Radical SAM superfamily
SynRS9909_RS13505	PF12804	MobA-like NTP transferase domain
SynRS9909_RS13515	PF07690	Major Facilitator Superfamily
SynRS9909_RS13520	PF00384	Molybdopterin oxidoreductase
SynRS9909_RS13520	PF01568	Molydopterin dinucleotide binding domain
SynRS9909_RS13520	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
SynRS9909_RS13535	PF00484	Carbonic anhydrase
SynRS9909_RS13540	PF01967	MoaC family
SynRS9909_RS13545	PF03454	MoeA C-terminal region (domain IV)
SynRS9909_RS13545	PF00994	Probable molybdopterin binding domain
SynRS9909_RS13545	PF03453	MoeA N-terminal region (domain I and II)
SynRS9909_RS13560	PF02391	MoaE protein
SynRS9909_RS13570	PF00994	Probable molybdopterin binding domain
SynRS9909_RS13575	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
SynRS9909_RS13585	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
SynRS9909_RS13585	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
SynRS9909_RS13595	PF01226	Formate/nitrite transporter
SynRS9909_RS13605	PF02560	Cyanate lyase C-terminal domain
SynRS9909_RS13615	PF02885	Glycosyl transferase family, helical bundle domain
SynRS9909_RS13615	PF00591	Glycosyl transferase family, a/b domain
SynRS9909_RS13625	PF07690	Major Facilitator Superfamily
SynRS9909_RS13630	PF02503	Polyphosphate kinase middle domain
SynRS9909_RS13630	PF17941	Polyphosphate kinase C-terminal domain 1
SynRS9909_RS13630	PF13090	Polyphosphate kinase C-terminal domain 2
SynRS9909_RS13630	PF13089	Polyphosphate kinase N-terminal domain
SynRS9909_RS13635	PF04545	Sigma-70, region 4
SynRS9909_RS13635	PF00140	Sigma-70 factor, region 1.2
SynRS9909_RS13635	PF04539	Sigma-70 region 3
SynRS9909_RS13635	PF04542	Sigma-70 region 2 
SynRS9909_RS13645	PF00793	DAHP synthetase I family
SynRS9909_RS13650	PF00330	Aconitase family (aconitate hydratase)
SynRS9909_RS13650	PF11791	Aconitate B N-terminal domain
SynRS9909_RS13650	PF06434	Aconitate hydratase 2 N-terminus
SynRS9909_RS13655	PF00654	Voltage gated chloride channel
SynRS9909_RS13670	PF01842	ACT domain
SynRS9909_RS13670	PF00551	Formyl transferase
SynRS9909_RS13680	PF01266	FAD dependent oxidoreductase
SynRS9909_RS13685	PF12849	PBP superfamily domain
SynRS9909_RS13690	PF00012	Hsp70 protein
SynRS9909_RS13695	PF01488	Shikimate / quinate 5-dehydrogenase
SynRS9909_RS13695	PF08501	Shikimate dehydrogenase substrate binding domain
SynRS9909_RS13695	PF18317	Shikimate 5'-dehydrogenase C-terminal domain
SynRS9909_RS13700	PF16166	Chloroplast import apparatus Tic20-like
SynRS9909_RS13705	PF01250	Ribosomal protein S6
SynRS9909_RS13715	PF00764	Arginosuccinate synthase
SynRS9909_RS13730	PF00953	Glycosyl transferase family 4
SynRS9909_RS13730	PF10555	Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 
SynRS9909_RS13755	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
SynRS9909_RS13755	PF02222	ATP-grasp domain
SynRS9909_RS13760	PF00862	Sucrose synthase
SynRS9909_RS13760	PF00534	Glycosyl transferases group 1
SynRS9909_RS13770	PF17755	UvrA DNA-binding domain
SynRS9909_RS13770	PF17760	UvrA interaction domain
SynRS9909_RS13775	PF02463	RecF/RecN/SMC N terminal domain
SynRS9909_RS13780	PF03109	ABC1 family
SynRS9909_RS13790	PF00291	Pyridoxal-phosphate dependent enzyme
