M744_RS00010	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
M744_RS00020	SM00382	ATPases associated with a variety of cellular activities
M744_RS00110	SM00240	Forkhead associated domain
M744_RS00115	SM00382	ATPases associated with a variety of cellular activities
M744_RS00120	SM00487	DEAD-like helicases superfamily
M744_RS00120	SM00490	helicase superfamily c-terminal domain
M744_RS00135	SM00382	ATPases associated with a variety of cellular activities
M744_RS00155	SM00448	cheY-homologous receiver domain
M744_RS00155	SM00862	Transcriptional regulatory protein, C terminal
M744_RS00225	SM00729	Elongator protein 3, MiaB family, Radical SAM
M744_RS00250	SM00861	Transketolase, pyrimidine binding domain
M744_RS00255	SM00825	Beta-ketoacyl synthase
M744_RS00260	SM00823	Phosphopantetheine attachment site
M744_RS00285	SM00028	Tetratricopeptide repeats
M744_RS00340	SM00877	M744_RS00340
M744_RS00360	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
M744_RS00360	SM00245	tail specific protease
M744_RS00375	SM00382	ATPases associated with a variety of cellular activities
M744_RS00475	SM00904	Riboflavin kinase
M744_RS00485	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
M744_RS00485	SM00091	PAS domain
M744_RS00485	SM00267	diguanylate cyclase
M744_RS00510	SM00855	Phosphoglycerate mutase family
M744_RS00535	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
M744_RS00535	SM00387	Histidine kinase-like ATPases
M744_RS00535	SM00388	His Kinase A (phosphoacceptor) domain
M744_RS00540	SM00838	Elongation factor G C-terminus
M744_RS00600	SM00235	Zinc-dependent metalloprotease
M744_RS00620	SM00226	Low molecular weight phosphatase family
M744_RS00665	SM00387	Histidine kinase-like ATPases
M744_RS00665	SM00388	His Kinase A (phosphoacceptor) domain
M744_RS00695	SM00478	endonuclease III
M744_RS00695	SM00525	M744_RS00695
M744_RS00725	SM01001	AIR carboxylase
M744_RS00785	SM00861	Transketolase, pyrimidine binding domain
M744_RS00795	SM00917	LeuA allosteric (dimerisation) domain
M744_RS00800	SM00382	ATPases associated with a variety of cellular activities
M744_RS00840	SM00729	Elongator protein 3, MiaB family, Radical SAM
M744_RS00840	SM00876	Biotin and Thiamin Synthesis associated domain
M744_RS00850	SM00382	ATPases associated with a variety of cellular activities
M744_RS00920	SM00937	M744_RS00920
M744_RS00960	SM00798	AICARFT/IMPCHase bienzyme
M744_RS00960	SM00851	MGS-like domain
M744_RS00980	SM00925	MltA specific insert domain
M744_RS01140	SM01093	M744_RS01140
M744_RS01145	SM00897	FIST N domain
M744_RS01145	SM01204	M744_RS01145
M744_RS01200	SM00382	ATPases associated with a variety of cellular activities
M744_RS01210	SM00382	ATPases associated with a variety of cellular activities
M744_RS01325	SM01094	CpcD/allophycocyanin linker domain
M744_RS01345	SM00938	Nitrogen regulatory protein P-II
M744_RS01355	SM00363	S4 RNA-binding domain
M744_RS01375	SM00998	Adenylosuccinate lyase C-terminus
M744_RS01395	SM00650	Ribosomal RNA adenine dimethylases
M744_RS01440	SM00155	Phospholipase D. Active site motifs.
M744_RS01465	SM00382	ATPases associated with a variety of cellular activities
M744_RS01510	SM00957	SecA DEAD-like domain
M744_RS01510	SM00958	SecA preprotein cross-linking domain
M744_RS01530	SM00877	M744_RS01530
M744_RS01535	SM00877	M744_RS01535
M744_RS01555	SM00852	Probable molybdopterin binding domain
M744_RS01560	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
M744_RS01570	SM00278	Helix-hairpin-helix DNA-binding motif class 1
M744_RS01570	SM00292	breast cancer carboxy-terminal domain
M744_RS01570	SM00532	Ligase N family
M744_RS01605	SM00028	Tetratricopeptide repeats
M744_RS01625	SM00271	DnaJ molecular chaperone homology domain
M744_RS01655	SM00382	ATPases associated with a variety of cellular activities
M744_RS01655	SM01086	C-terminal, D2-small domain, of ClpB protein
M744_RS01680	SM00382	ATPases associated with a variety of cellular activities
M744_RS01685	SM00434	DNA Topoisomerase IV
M744_RS01695	SM01093	M744_RS01695
M744_RS01700	SM00479	M744_RS01700
M744_RS01710	SM00382	ATPases associated with a variety of cellular activities
M744_RS01725	SM00062	Bacterial periplasmic substrate-binding proteins
M744_RS01730	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
M744_RS01780	SM00100	Cyclic nucleotide-monophosphate binding domain
M744_RS01785	SM00100	Cyclic nucleotide-monophosphate binding domain
M744_RS01885	SM00829	Enoylreductase
M744_RS01925	SM00028	Tetratricopeptide repeats
M744_RS01995	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
M744_RS01995	SM00474	3'-5' exonuclease
M744_RS01995	SM00475	5'-3' exonuclease
M744_RS01995	SM00482	DNA polymerase A domain
M744_RS02025	SM00052	Putative diguanylate phosphodiesterase
M744_RS02025	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
M744_RS02025	SM00091	PAS domain
M744_RS02025	SM00267	diguanylate cyclase
M744_RS02060	SM00382	ATPases associated with a variety of cellular activities
M744_RS02075	SM00382	ATPases associated with a variety of cellular activities
M744_RS02120	SM01230	M744_RS02120
M744_RS02175	SM00232	JAB/MPN domain
M744_RS02180	SM00450	Rhodanese Homology Domain
M744_RS02215	SM00267	diguanylate cyclase
M744_RS02215	SM00448	cheY-homologous receiver domain
M744_RS02255	SM00861	Transketolase, pyrimidine binding domain
M744_RS02315	SM00100	Cyclic nucleotide-monophosphate binding domain
M744_RS02325	SM00732	Likely ribonuclease with RNase H fold.
M744_RS02335	SM00100	Cyclic nucleotide-monophosphate binding domain
M744_RS02335	SM00419	helix_turn_helix, cAMP Regulatory protein
M744_RS02360	SM00052	Putative diguanylate phosphodiesterase
M744_RS02385	SM00845	GatB domain
M744_RS02420	SM00530	Helix-turn-helix XRE-family like proteins 
M744_RS02430	SM00470	ParB-like nuclease domain
M744_RS02455	SM00248	ankyrin repeats
M744_RS02500	SM00448	cheY-homologous receiver domain
M744_RS02500	SM00862	Transcriptional regulatory protein, C terminal
M744_RS02525	SM00345	helix_turn_helix gluconate operon transcriptional repressor
M744_RS02545	SM00849	Metallo-beta-lactamase superfamily
M744_RS02555	SM00642	Alpha-amylase domain
M744_RS02575	SM00382	ATPases associated with a variety of cellular activities
M744_RS02580	SM00363	S4 RNA-binding domain
M744_RS02600	SM00530	Helix-turn-helix XRE-family like proteins 
M744_RS02605	SM00062	Bacterial periplasmic substrate-binding proteins
M744_RS02605	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
M744_RS02610	SM01011	Aminopeptidase P, N-terminal domain
M744_RS02645	SM00382	ATPases associated with a variety of cellular activities
M744_RS02665	SM00195	Dual specificity phosphatase, catalytic domain
M744_RS02725	SM00028	Tetratricopeptide repeats
M744_RS02745	SM00028	Tetratricopeptide repeats
M744_RS02755	SM00028	Tetratricopeptide repeats
M744_RS02780	SM00905	Dihydroneopterin aldolase
M744_RS02785	SM01350	M744_RS02785
M744_RS02905	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
M744_RS02975	SM00480	DNA polymerase III beta subunit
M744_RS03015	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
M744_RS03060	SM01118	M744_RS03060
M744_RS03070	SM01091	Transporter associated domain
M744_RS03160	SM00271	DnaJ molecular chaperone homology domain
M744_RS03210	SM00382	ATPases associated with a variety of cellular activities
M744_RS03235	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
M744_RS03255	SM00841	Elongation factor P, C-terminal
M744_RS03255	SM01185	M744_RS03255
M744_RS03295	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
M744_RS03370	SM00986	Uracil DNA glycosylase superfamily
M744_RS03370	SM00987	UreE urease accessory protein, C-terminal domain 
M744_RS03415	SM00028	Tetratricopeptide repeats
M744_RS03415	SM00271	DnaJ molecular chaperone homology domain
M744_RS03420	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
M744_RS03420	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
M744_RS03420	SM00091	PAS domain
M744_RS03420	SM00267	diguanylate cyclase
M744_RS03425	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
M744_RS03425	SM00267	diguanylate cyclase
M744_RS03465	SM00382	ATPases associated with a variety of cellular activities
M744_RS03465	SM00994	ClpX C4-type zinc finger
M744_RS03465	SM01086	C-terminal, D2-small domain, of ClpB protein
M744_RS03490	SM00670	Large family of predicted nucleotide-binding domains
M744_RS03500	SM00052	Putative diguanylate phosphodiesterase
M744_RS03500	SM00267	diguanylate cyclase
M744_RS03545	SM00729	Elongator protein 3, MiaB family, Radical SAM
M744_RS03610	SM00244	prohibitin homologues
M744_RS03615	SM00244	prohibitin homologues
M744_RS03620	SM00562	M744_RS03620
M744_RS03640	SM00382	ATPases associated with a variety of cellular activities
M744_RS03645	SM00382	ATPases associated with a variety of cellular activities
M744_RS03650	SM00387	Histidine kinase-like ATPases
M744_RS03650	SM00433	TopoisomeraseII
M744_RS03690	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
M744_RS03720	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
M744_RS03720	SM00331	Sigma factor PP2C-like phosphatases
M744_RS03725	SM00382	ATPases associated with a variety of cellular activities
M744_RS03725	SM00962	SRP54-type protein, GTPase domain
M744_RS03725	SM00963	SRP54-type protein, helical bundle domain
M744_RS03755	SM00448	cheY-homologous receiver domain
M744_RS03755	SM00862	Transcriptional regulatory protein, C terminal
M744_RS03900	SM00382	ATPases associated with a variety of cellular activities
M744_RS03905	SM00316	Ribosomal protein S1-like RNA-binding domain
M744_RS03905	SM00322	K homology RNA-binding domain
M744_RS03975	SM00450	Rhodanese Homology Domain
M744_RS03995	SM01228	M744_RS03995
M744_RS04030	SM00448	cheY-homologous receiver domain
M744_RS04030	SM00862	Transcriptional regulatory protein, C terminal
M744_RS04045	SM00244	prohibitin homologues
M744_RS04060	SM00788	Adenylosuccinate synthetase
M744_RS04120	SM00732	Likely ribonuclease with RNase H fold.
M744_RS04165	SM00271	DnaJ molecular chaperone homology domain
M744_RS04170	SM00835	Cupin
M744_RS04190	SM00890	Domain of unknown function
M744_RS04195	SM00670	Large family of predicted nucleotide-binding domains
M744_RS04200	SM00729	Elongator protein 3, MiaB family, Radical SAM
M744_RS04220	SM00864	Tubulin/FtsZ family, GTPase domain
M744_RS04220	SM00865	Tubulin/FtsZ family, C-terminal domain
M744_RS04240	SM00729	Elongator protein 3, MiaB family, Radical SAM
M744_RS04245	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
M744_RS04315	SM00646	M744_RS04315
M744_RS04335	SM00419	helix_turn_helix, cAMP Regulatory protein
M744_RS04370	SM00382	ATPases associated with a variety of cellular activities
M744_RS04415	SM00382	ATPases associated with a variety of cellular activities
M744_RS04430	SM00644	M744_RS04430
M744_RS04460	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
M744_RS04460	SM00245	tail specific protease
M744_RS04465	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
M744_RS04470	SM00028	Tetratricopeptide repeats
M744_RS04485	SM00567	E-Z type HEAT repeats
M744_RS04505	SM00028	Tetratricopeptide repeats
M744_RS04515	SM00530	Helix-turn-helix XRE-family like proteins 
M744_RS04535	SM00382	ATPases associated with a variety of cellular activities
M744_RS04540	SM00883	Chaperonin 10 Kd subunit
M744_RS04585	SM00271	DnaJ molecular chaperone homology domain
M744_RS04590	SM00448	cheY-homologous receiver domain
M744_RS04590	SM00862	Transcriptional regulatory protein, C terminal
M744_RS04620	SM01387	M744_RS04620
M744_RS04625	SM00278	Helix-hairpin-helix DNA-binding motif class 1
M744_RS04635	SM01230	M744_RS04635
M744_RS04660	SM00116	Domain in cystathionine beta-synthase and other proteins.
M744_RS04705	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
M744_RS04705	SM00387	Histidine kinase-like ATPases
M744_RS04705	SM00388	His Kinase A (phosphoacceptor) domain
M744_RS04715	SM00028	Tetratricopeptide repeats
M744_RS04750	SM00327	von Willebrand factor (vWF) type A domain
M744_RS04750	SM00382	ATPases associated with a variety of cellular activities
M744_RS04800	SM00421	helix_turn_helix, Lux Regulon
M744_RS04885	SM00411	bacterial (prokaryotic) histone like domain
M744_RS04895	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
M744_RS04895	SM00534	ATPase domain of DNA mismatch repair MUTS family
M744_RS04925	SM00388	His Kinase A (phosphoacceptor) domain
M744_RS04950	SM00382	ATPases associated with a variety of cellular activities
M744_RS04985	SM01382	M744_RS04985
M744_RS04985	SM01383	M744_RS04985
M744_RS05000	SM00322	K homology RNA-binding domain
M744_RS05020	SM01374	M744_RS05020
M744_RS05025	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
M744_RS05080	SM00662	RNA polymerases D
M744_RS05110	SM00937	M744_RS05110
M744_RS05115	SM00507	HNH nucleases
M744_RS05120	SM01005	Alanine racemase, C-terminal domain
M744_RS05135	SM00306	Hint (Hedgehog/Intein) domain N-terminal region
M744_RS05135	SM00481	DNA polymerase alpha chain like domain
M744_RS05140	SM00933	M744_RS05140
M744_RS05145	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
M744_RS05155	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
M744_RS05155	SM01080	M744_RS05155
M744_RS05165	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
M744_RS05165	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
M744_RS05170	SM00267	diguanylate cyclase
M744_RS05230	SM00046	Diacylglycerol kinase catalytic domain (presumed)
M744_RS05255	SM00419	helix_turn_helix, cAMP Regulatory protein
M744_RS05345	SM01230	M744_RS05345
M744_RS05385	SM00382	ATPases associated with a variety of cellular activities
M744_RS05410	SM00318	Staphylococcal nuclease homologues
M744_RS05470	SM00646	M744_RS05470
M744_RS05500	SM00930	M744_RS05500
M744_RS05535	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
M744_RS05545	SM00535	Ribonuclease III family
M744_RS05550	SM00967	RNA 2'-O ribose methyltransferase substrate binding
M744_RS05580	SM00387	Histidine kinase-like ATPases
M744_RS05580	SM00388	His Kinase A (phosphoacceptor) domain
M744_RS05580	SM01248	M744_RS05580
M744_RS05585	SM01400	M744_RS05585
M744_RS05605	SM00382	ATPases associated with a variety of cellular activities
M744_RS05625	SM00382	ATPases associated with a variety of cellular activities
M744_RS05630	SM01116	M744_RS05630
M744_RS05670	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
M744_RS05670	SM00116	Domain in cystathionine beta-synthase and other proteins.
M744_RS05670	SM00267	diguanylate cyclase
M744_RS05680	SM00554	Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.
M744_RS05705	SM00756	M744_RS05705
M744_RS05740	SM00838	Elongation factor G C-terminus
M744_RS05740	SM00889	Elongation factor G, domain IV
M744_RS05760	SM00855	Phosphoglycerate mutase family
M744_RS05780	SM00271	DnaJ molecular chaperone homology domain
M744_RS05785	SM00842	Cell division protein FtsA
M744_RS05795	SM00382	ATPases associated with a variety of cellular activities
M744_RS05800	SM00382	ATPases associated with a variety of cellular activities
M744_RS05860	SM01207	M744_RS05860
M744_RS05920	SM00968	SMC proteins Flexible Hinge Domain
M744_RS05955	SM00530	Helix-turn-helix XRE-family like proteins 
M744_RS06035	SM00322	K homology RNA-binding domain
M744_RS06095	SM00849	Metallo-beta-lactamase superfamily
M744_RS06110	SM00903	Flavin reductase like domain
M744_RS06135	SM00754	A domain in the BMP inhibitor chordin and in microbial proteins.
M744_RS06150	SM00240	Forkhead associated domain
M744_RS06155	SM00360	RNA recognition motif
M744_RS06160	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
M744_RS06185	SM01007	Class II Aldolase and Adducin N-terminal domain
M744_RS06290	SM00028	Tetratricopeptide repeats
M744_RS06360	SM00100	Cyclic nucleotide-monophosphate binding domain
M744_RS06420	SM00465	GIY-YIG type nucleases (URI domain)
M744_RS06450	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
M744_RS06550	SM00530	Helix-turn-helix XRE-family like proteins 
M744_RS06595	SM00316	Ribosomal protein S1-like RNA-binding domain
M744_RS06595	SM00357	Cold shock protein domain
M744_RS06595	SM00955	M744_RS06595
M744_RS06625	SM00100	Cyclic nucleotide-monophosphate binding domain
M744_RS06625	SM00382	ATPases associated with a variety of cellular activities
M744_RS06685	SM00382	ATPases associated with a variety of cellular activities
M744_RS06690	SM00450	Rhodanese Homology Domain
M744_RS06765	SM00460	Transglutaminase/protease-like homologues
M744_RS06785	SM00448	cheY-homologous receiver domain
M744_RS06785	SM00862	Transcriptional regulatory protein, C terminal
M744_RS06790	SM00387	Histidine kinase-like ATPases
M744_RS06790	SM00388	His Kinase A (phosphoacceptor) domain
M744_RS06855	SM00421	helix_turn_helix, Lux Regulon
M744_RS06855	SM00448	cheY-homologous receiver domain
M744_RS06860	SM00052	Putative diguanylate phosphodiesterase
M744_RS06860	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
M744_RS06860	SM00091	PAS domain
M744_RS06860	SM00267	diguanylate cyclase
M744_RS06920	SM00859	Semialdehyde dehydrogenase, NAD binding domain
M744_RS06925	SM01130	M744_RS06925
M744_RS06930	SM00849	Metallo-beta-lactamase superfamily
M744_RS07005	SM01240	M744_RS07005
M744_RS07040	SM00116	Domain in cystathionine beta-synthase and other proteins.
M744_RS07045	SM00567	E-Z type HEAT repeats
M744_RS07070	SM00448	cheY-homologous receiver domain
M744_RS07075	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
M744_RS07075	SM00387	Histidine kinase-like ATPases
M744_RS07075	SM00388	His Kinase A (phosphoacceptor) domain
M744_RS07075	SM00448	cheY-homologous receiver domain
M744_RS07080	SM00388	His Kinase A (phosphoacceptor) domain
M744_RS07080	SM00448	cheY-homologous receiver domain
M744_RS07085	SM00100	Cyclic nucleotide-monophosphate binding domain
M744_RS07090	SM00387	Histidine kinase-like ATPases
M744_RS07095	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
M744_RS07095	SM00091	PAS domain
M744_RS07095	SM00267	diguanylate cyclase
M744_RS07100	SM00849	Metallo-beta-lactamase superfamily
M744_RS07100	SM00903	Flavin reductase like domain
M744_RS07105	SM00849	Metallo-beta-lactamase superfamily
M744_RS07105	SM00903	Flavin reductase like domain
M744_RS07190	SM01004	Delta-aminolevulinic acid dehydratase
M744_RS07205	SM00271	DnaJ molecular chaperone homology domain
M744_RS07250	SM00853	MutL C terminal dimerisation domain
M744_RS07250	SM01340	M744_RS07250
M744_RS07295	SM00382	ATPases associated with a variety of cellular activities
M744_RS07295	SM00962	SRP54-type protein, GTPase domain
M744_RS07295	SM00963	SRP54-type protein, helical bundle domain
M744_RS07350	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
M744_RS07350	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
M744_RS07380	SM00185	Armadillo/beta-catenin-like repeats
M744_RS07380	SM00567	E-Z type HEAT repeats
M744_RS07430	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
M744_RS07445	SM00422	helix_turn_helix, mercury resistance
M744_RS07460	SM00382	ATPases associated with a variety of cellular activities
M744_RS07515	SM00345	helix_turn_helix gluconate operon transcriptional repressor
M744_RS07540	SM00567	E-Z type HEAT repeats
M744_RS07555	SM01329	M744_RS07555
M744_RS07570	SM00052	Putative diguanylate phosphodiesterase
M744_RS07570	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
M744_RS07570	SM00091	PAS domain
M744_RS07570	SM00267	diguanylate cyclase
M744_RS07630	SM00872	Alpha mannosidase, middle domain
M744_RS07655	SM00704	CDGSH-type zinc finger. Function unknown.
M744_RS07670	SM00434	DNA Topoisomerase IV
M744_RS07675	SM00448	cheY-homologous receiver domain
M744_RS07690	SM00450	Rhodanese Homology Domain
M744_RS07715	SM00419	helix_turn_helix, cAMP Regulatory protein
M744_RS07720	SM00930	M744_RS07720
M744_RS07735	SM00382	ATPases associated with a variety of cellular activities
M744_RS07820	SM00840	M744_RS07820
M744_RS07870	SM00729	Elongator protein 3, MiaB family, Radical SAM
M744_RS07905	SM00358	Double-stranded RNA binding motif
M744_RS07905	SM00535	Ribonuclease III family
M744_RS07915	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
M744_RS07915	SM00267	diguanylate cyclase
M744_RS07935	SM00382	ATPases associated with a variety of cellular activities
M744_RS07975	SM00271	DnaJ molecular chaperone homology domain
M744_RS08065	SM01234	M744_RS08065
M744_RS08070	SM00363	S4 RNA-binding domain
M744_RS08070	SM01390	M744_RS08070
M744_RS08085	SM00382	ATPases associated with a variety of cellular activities
M744_RS08090	SM00382	ATPases associated with a variety of cellular activities
M744_RS08150	SM00363	S4 RNA-binding domain
M744_RS08160	SM01329	M744_RS08160
M744_RS08175	SM00729	Elongator protein 3, MiaB family, Radical SAM
M744_RS08215	SM00331	Sigma factor PP2C-like phosphatases
M744_RS08215	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
M744_RS08220	SM00855	Phosphoglycerate mutase family
M744_RS08225	SM00388	His Kinase A (phosphoacceptor) domain
M744_RS08255	SM00663	RNA polymerase I subunit A N-terminus
M744_RS08310	SM00950	M744_RS08310
M744_RS08350	SM00955	M744_RS08350
M744_RS08385	SM00481	DNA polymerase alpha chain like domain
M744_RS08525	SM00836	DALR anticodon binding domain
M744_RS08525	SM01016	Arginyl tRNA synthetase N terminal dom
M744_RS08535	SM00404	Protein tyrosine phosphatase, catalytic domain motif
M744_RS08545	SM00631	M744_RS08545
M744_RS08565	SM00644	M744_RS08565
M744_RS08570	SM00387	Histidine kinase-like ATPases
M744_RS08570	SM00388	His Kinase A (phosphoacceptor) domain
M744_RS08580	SM00116	Domain in cystathionine beta-synthase and other proteins.
M744_RS08595	SM00316	Ribosomal protein S1-like RNA-binding domain
M744_RS08665	SM00554	Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.
M744_RS08680	SM00306	Hint (Hedgehog/Intein) domain N-terminal region
M744_RS08695	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
M744_RS08695	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
M744_RS08725	SM00393	Putative single-stranded nucleic acids-binding domain
M744_RS08735	SM00382	ATPases associated with a variety of cellular activities
M744_RS08740	SM00729	Elongator protein 3, MiaB family, Radical SAM
M744_RS08790	SM00028	Tetratricopeptide repeats
M744_RS08840	SM00563	Phosphate acyltransferases
M744_RS08845	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
M744_RS08860	SM00448	cheY-homologous receiver domain
M744_RS08860	SM00862	Transcriptional regulatory protein, C terminal
M744_RS08865	SM00382	ATPases associated with a variety of cellular activities
M744_RS08875	SM00382	ATPases associated with a variety of cellular activities
M744_RS08890	SM00947	Carbonic anhydrase
M744_RS08970	SM00859	Semialdehyde dehydrogenase, NAD binding domain
M744_RS09000	SM00961	Ribulose bisphosphate carboxylase, small chain
M744_RS09010	SM00877	M744_RS09010
M744_RS09020	SM00961	Ribulose bisphosphate carboxylase, small chain
M744_RS09030	SM00877	M744_RS09030
M744_RS09055	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
M744_RS09055	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
M744_RS09055	SM00493	M744_RS09055
M744_RS09065	SM00382	ATPases associated with a variety of cellular activities
M744_RS09085	SM00917	LeuA allosteric (dimerisation) domain
M744_RS09105	SM00382	ATPases associated with a variety of cellular activities
M744_RS09115	SM00448	cheY-homologous receiver domain
M744_RS09115	SM00862	Transcriptional regulatory protein, C terminal
M744_RS09120	SM00849	Metallo-beta-lactamase superfamily
M744_RS09135	SM00633	Glycosyl hydrolase family 10
M744_RS09165	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
M744_RS09180	SM00382	ATPases associated with a variety of cellular activities
M744_RS09195	SM01057	Eukaryotic-type carbonic anhydrase
M744_RS09225	SM00052	Putative diguanylate phosphodiesterase
M744_RS09225	SM00091	PAS domain
M744_RS09225	SM00267	diguanylate cyclase
M744_RS09230	SM00382	ATPases associated with a variety of cellular activities
M744_RS09240	SM00878	Biotin carboxylase C-terminal domain
M744_RS09255	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
M744_RS09255	SM00954	Region found in RelA / SpoT proteins
M744_RS09280	SM01018	B12 binding domain
M744_RS09295	SM00493	M744_RS09295
M744_RS09355	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
M744_RS09355	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
M744_RS09355	SM00091	PAS domain
M744_RS09355	SM00387	Histidine kinase-like ATPases
M744_RS09355	SM00388	His Kinase A (phosphoacceptor) domain
M744_RS09360	SM00448	cheY-homologous receiver domain
M744_RS09365	SM00052	Putative diguanylate phosphodiesterase
M744_RS09365	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
M744_RS09365	SM00091	PAS domain
M744_RS09365	SM00267	diguanylate cyclase
M744_RS09365	SM00448	cheY-homologous receiver domain
M744_RS09455	SM00191	Integrin alpha (beta-propellor repeats).
M744_RS09510	SM00487	DEAD-like helicases superfamily
M744_RS09510	SM00490	helicase superfamily c-terminal domain
M744_RS09510	SM00982	M744_RS09510
M744_RS09510	SM01058	CarD-like/TRCF domain
M744_RS09515	SM00382	ATPases associated with a variety of cellular activities
M744_RS09520	SM00487	DEAD-like helicases superfamily
M744_RS09520	SM00490	helicase superfamily c-terminal domain
M744_RS09520	SM01142	M744_RS09520
M744_RS09525	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
M744_RS09525	SM01232	M744_RS09525
M744_RS09540	SM00880	M744_RS09540
M744_RS09555	SM00382	ATPases associated with a variety of cellular activities
M744_RS09570	SM00382	ATPases associated with a variety of cellular activities
M744_RS09580	SM00382	ATPases associated with a variety of cellular activities
M744_RS09615	SM00382	ATPases associated with a variety of cellular activities
M744_RS09635	SM00487	DEAD-like helicases superfamily
M744_RS09635	SM00490	helicase superfamily c-terminal domain
M744_RS09650	SM00267	diguanylate cyclase
M744_RS09655	SM00919	Malic enzyme, NAD binding domain
M744_RS09655	SM01274	M744_RS09655
M744_RS09665	SM00563	Phosphate acyltransferases
M744_RS09670	SM00220	Serine/Threonine protein kinases, catalytic domain
M744_RS09675	SM00873	B3/4 domain
M744_RS09675	SM00874	tRNA synthetase B5 domain
M744_RS09675	SM00896	Ferredoxin-fold anticodon binding domain
M744_RS09680	SM00400	zinc finger
M744_RS09680	SM00493	M744_RS09680
M744_RS09685	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
M744_RS09705	SM00852	Probable molybdopterin binding domain
M744_RS09710	SM00852	Probable molybdopterin binding domain
M744_RS09725	SM00729	Elongator protein 3, MiaB family, Radical SAM
M744_RS09755	SM00062	Bacterial periplasmic substrate-binding proteins
M744_RS09765	SM00028	Tetratricopeptide repeats
M744_RS09790	SM00116	Domain in cystathionine beta-synthase and other proteins.
M744_RS09790	SM00924	MgtE intracellular N domain
M744_RS09820	SM00981	M744_RS09820
M744_RS09865	SM00100	Cyclic nucleotide-monophosphate binding domain
M744_RS09915	SM00382	ATPases associated with a variety of cellular activities
M744_RS09920	SM00100	Cyclic nucleotide-monophosphate binding domain
M744_RS09950	SM00382	ATPases associated with a variety of cellular activities
M744_RS09955	SM00382	ATPases associated with a variety of cellular activities
M744_RS09960	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
M744_RS10000	SM00278	Helix-hairpin-helix DNA-binding motif class 1
M744_RS10035	SM00448	cheY-homologous receiver domain
M744_RS10050	SM01247	M744_RS10050
M744_RS10055	SM01248	M744_RS10055
M744_RS10150	SM00967	RNA 2'-O ribose methyltransferase substrate binding
M744_RS10180	SM00563	Phosphate acyltransferases
M744_RS10190	SM00072	Guanylate kinase homologues.
M744_RS10300	SM01001	AIR carboxylase
M744_RS10310	SM00857	Resolvase, N terminal domain
M744_RS10350	SM00347	helix_turn_helix multiple antibiotic resistance protein
M744_RS10355	SM00052	Putative diguanylate phosphodiesterase
M744_RS10355	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
M744_RS10355	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
M744_RS10355	SM00091	PAS domain
M744_RS10355	SM00267	diguanylate cyclase
M744_RS10410	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
M744_RS10410	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
M744_RS10475	SM00567	E-Z type HEAT repeats
M744_RS10490	SM00382	ATPases associated with a variety of cellular activities
M744_RS10505	SM00331	Sigma factor PP2C-like phosphatases
M744_RS10505	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
M744_RS10530	SM00073	Histidine Phosphotransfer domain
M744_RS10535	SM00955	M744_RS10535
M744_RS10590	SM00363	S4 RNA-binding domain
M744_RS10595	SM00220	Serine/Threonine protein kinases, catalytic domain
M744_RS10600	SM00448	cheY-homologous receiver domain
M744_RS10610	SM00411	bacterial (prokaryotic) histone like domain
M744_RS10615	SM00028	Tetratricopeptide repeats
M744_RS10645	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
M744_RS10650	SM00382	ATPases associated with a variety of cellular activities
M744_RS10650	SM00760	Bacterial dnaA protein helix-turn-helix domain
M744_RS10700	SM00382	ATPases associated with a variety of cellular activities
M744_RS10700	SM01086	C-terminal, D2-small domain, of ClpB protein
M744_RS10720	SM00642	Alpha-amylase domain
M744_RS10735	SM00831	Cation transporter/ATPase, N-terminus
M744_RS10755	SM00487	DEAD-like helicases superfamily
M744_RS10755	SM00490	helicase superfamily c-terminal domain
M744_RS10825	SM00487	DEAD-like helicases superfamily
M744_RS10875	SM00530	Helix-turn-helix XRE-family like proteins 
M744_RS10880	SM00567	E-Z type HEAT repeats
M744_RS10885	SM00567	E-Z type HEAT repeats
M744_RS10900	SM01094	CpcD/allophycocyanin linker domain
M744_RS10905	SM01094	CpcD/allophycocyanin linker domain
M744_RS10910	SM01094	CpcD/allophycocyanin linker domain
M744_RS10980	SM00460	Transglutaminase/protease-like homologues
M744_RS11025	SM00028	Tetratricopeptide repeats
M744_RS11045	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
M744_RS11070	SM00260	Two component signalling adaptor domain
M744_RS11075	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
M744_RS11075	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
M744_RS11080	SM00073	Histidine Phosphotransfer domain
M744_RS11080	SM00260	Two component signalling adaptor domain
M744_RS11080	SM00387	Histidine kinase-like ATPases
M744_RS11080	SM00448	cheY-homologous receiver domain
M744_RS11080	SM01231	M744_RS11080
M744_RS11090	SM00448	cheY-homologous receiver domain
M744_RS11090	SM00862	Transcriptional regulatory protein, C terminal
M744_RS11095	SM00091	PAS domain
M744_RS11095	SM00387	Histidine kinase-like ATPases
M744_RS11095	SM00388	His Kinase A (phosphoacceptor) domain
M744_RS11100	SM00363	S4 RNA-binding domain
M744_RS11105	SM00530	Helix-turn-helix XRE-family like proteins 
M744_RS11125	SM00028	Tetratricopeptide repeats
M744_RS11165	SM00382	ATPases associated with a variety of cellular activities
M744_RS11240	SM01133	M744_RS11240
M744_RS11270	SM01094	CpcD/allophycocyanin linker domain
M744_RS11280	SM00116	Domain in cystathionine beta-synthase and other proteins.
M744_RS11300	SM00959	Rho termination factor, N-terminal domain
M744_RS11350	SM00382	ATPases associated with a variety of cellular activities
M744_RS11370	SM00833	Cobalamin synthesis protein cobW C-terminal domain
M744_RS11415	SM00382	ATPases associated with a variety of cellular activities
M744_RS11440	SM00382	ATPases associated with a variety of cellular activities
M744_RS11445	SM00382	ATPases associated with a variety of cellular activities
M744_RS11450	SM00530	Helix-turn-helix XRE-family like proteins 
M744_RS11460	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
M744_RS11465	SM00849	Metallo-beta-lactamase superfamily
M744_RS11470	SM00450	Rhodanese Homology Domain
M744_RS11525	SM01209	M744_RS11525
M744_RS11525	SM01210	M744_RS11525
M744_RS11530	SM00091	PAS domain
M744_RS11530	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
M744_RS11530	SM00387	Histidine kinase-like ATPases
M744_RS11530	SM00388	His Kinase A (phosphoacceptor) domain
M744_RS11565	SM00930	M744_RS11565
M744_RS11595	SM00382	ATPases associated with a variety of cellular activities
M744_RS11695	SM00729	Elongator protein 3, MiaB family, Radical SAM
M744_RS11730	SM00838	Elongation factor G C-terminus
M744_RS11730	SM00889	Elongation factor G, domain IV
M744_RS11740	SM01403	M744_RS11740
M744_RS11745	SM00464	Found in ATP-dependent protease La (LON)
M744_RS11765	SM00316	Ribosomal protein S1-like RNA-binding domain
M744_RS11770	SM00729	Elongator protein 3, MiaB family, Radical SAM
M744_RS11775	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
M744_RS11785	SM00487	DEAD-like helicases superfamily
M744_RS11785	SM00490	helicase superfamily c-terminal domain
M744_RS11855	SM00260	Two component signalling adaptor domain
M744_RS11860	SM00073	Histidine Phosphotransfer domain
M744_RS11860	SM00260	Two component signalling adaptor domain
M744_RS11860	SM00387	Histidine kinase-like ATPases
M744_RS11860	SM00448	cheY-homologous receiver domain
M744_RS11860	SM01231	M744_RS11860
M744_RS11865	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
M744_RS11865	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
M744_RS11865	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
M744_RS11870	SM00260	Two component signalling adaptor domain
M744_RS11875	SM00448	cheY-homologous receiver domain
M744_RS11880	SM00448	cheY-homologous receiver domain
M744_RS11910	SM00382	ATPases associated with a variety of cellular activities
M744_RS11915	SM00382	ATPases associated with a variety of cellular activities
M744_RS11925	SM00481	DNA polymerase alpha chain like domain
M744_RS11955	SM00729	Elongator protein 3, MiaB family, Radical SAM
M744_RS11970	SM00382	ATPases associated with a variety of cellular activities
M744_RS11995	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
M744_RS12015	SM00833	Cobalamin synthesis protein cobW C-terminal domain
M744_RS12055	SM01211	M744_RS12055
M744_RS12070	SM00052	Putative diguanylate phosphodiesterase
M744_RS12070	SM00267	diguanylate cyclase
M744_RS12075	SM00382	ATPases associated with a variety of cellular activities
M744_RS12090	SM00028	Tetratricopeptide repeats
M744_RS12090	SM00271	DnaJ molecular chaperone homology domain
M744_RS12155	SM00729	Elongator protein 3, MiaB family, Radical SAM
M744_RS12200	SM00360	RNA recognition motif
M744_RS12235	SM00382	ATPases associated with a variety of cellular activities
M744_RS12245	SM00220	Serine/Threonine protein kinases, catalytic domain
M744_RS12250	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
M744_RS12305	SM00530	Helix-turn-helix XRE-family like proteins 
M744_RS12310	SM00530	Helix-turn-helix XRE-family like proteins 
M744_RS12505	SM00778	Zinc-binding domain of primase-helicase
M744_RS12510	SM00990	M744_RS12510
M744_RS12515	SM00487	DEAD-like helicases superfamily
M744_RS12515	SM00490	helicase superfamily c-terminal domain
M744_RS12600	SM00287	Bacterial SH3 domain homologues
M744_RS12600	SM00646	M744_RS12600
M744_RS12610	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
M744_RS12610	SM00245	tail specific protease
M744_RS12615	SM00851	MGS-like domain
M744_RS12615	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
M744_RS12700	SM00316	Ribosomal protein S1-like RNA-binding domain
M744_RS12730	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
M744_RS12755	SM00822	M744_RS12755
M744_RS12780	SM00360	RNA recognition motif
M744_RS12790	SM00474	3'-5' exonuclease
M744_RS12820	SM00478	endonuclease III
M744_RS12820	SM00525	M744_RS12820
M744_RS12855	SM00271	DnaJ molecular chaperone homology domain
M744_RS12865	SM00100	Cyclic nucleotide-monophosphate binding domain
M744_RS12870	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
M744_RS12870	SM01080	M744_RS12870
M744_RS12930	SM00487	DEAD-like helicases superfamily
M744_RS12930	SM00490	helicase superfamily c-terminal domain
M744_RS12965	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
M744_RS12965	SM00387	Histidine kinase-like ATPases
M744_RS12965	SM00388	His Kinase A (phosphoacceptor) domain
M744_RS12965	SM00448	cheY-homologous receiver domain
M744_RS12985	SM00382	ATPases associated with a variety of cellular activities
M744_RS12990	SM01192	M744_RS12990
M744_RS12990	SM01193	M744_RS12990
M744_RS13000	SM00382	ATPases associated with a variety of cellular activities
M744_RS13000	SM01086	C-terminal, D2-small domain, of ClpB protein
M744_RS13010	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
M744_RS13010	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
M744_RS13015	SM00649	Ribosomal protein L11/L12
M744_RS13065	SM00382	ATPases associated with a variety of cellular activities
M744_RS13065	SM00393	Putative single-stranded nucleic acids-binding domain
M744_RS13080	SM00382	ATPases associated with a variety of cellular activities
M744_RS13100	SM00996	S-adenosyl-L-homocysteine hydrolase
M744_RS13100	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
M744_RS13115	SM00450	Rhodanese Homology Domain
M744_RS13125	SM00855	Phosphoglycerate mutase family
M744_RS13135	SM00463	Small MutS-related domain
M744_RS13135	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
M744_RS13135	SM00534	ATPase domain of DNA mismatch repair MUTS family
M744_RS13185	SM00220	Serine/Threonine protein kinases, catalytic domain
M744_RS13200	SM00257	Lysin motif
M744_RS13220	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
