AOY38_RS00050	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AOY38_RS00050	SM00292	breast cancer carboxy-terminal domain
AOY38_RS00050	SM00532	Ligase N family
AOY38_RS00070	SM00382	ATPases associated with a variety of cellular activities
AOY38_RS00085	SM00342	helix_turn_helix, arabinose operon control protein
AOY38_RS00110	SM00342	helix_turn_helix, arabinose operon control protein
AOY38_RS00140	SM00698	Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases.
AOY38_RS00145	SM00382	ATPases associated with a variety of cellular activities
AOY38_RS00150	SM00342	helix_turn_helix, arabinose operon control protein
AOY38_RS00175	SM00382	ATPases associated with a variety of cellular activities
AOY38_RS00250	SM00382	ATPases associated with a variety of cellular activities
AOY38_RS00370	SM00072	Guanylate kinase homologues.
AOY38_RS00375	SM00855	Phosphoglycerate mutase family
AOY38_RS00395	SM00460	Transglutaminase/protease-like homologues
AOY38_RS00405	SM00244	prohibitin homologues
AOY38_RS00410	SM00316	Ribosomal protein S1-like RNA-binding domain
AOY38_RS00425	SM00316	Ribosomal protein S1-like RNA-binding domain
AOY38_RS00425	SM00322	K homology RNA-binding domain
AOY38_RS00435	SM00919	Malic enzyme, NAD binding domain
AOY38_RS00435	SM01274	AOY38_RS00435
AOY38_RS00460	SM00650	Ribosomal RNA adenine dimethylases
AOY38_RS00465	SM00046	Diacylglycerol kinase catalytic domain (presumed)
AOY38_RS00560	SM00091	PAS domain
AOY38_RS00560	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AOY38_RS00560	SM00387	Histidine kinase-like ATPases
AOY38_RS00560	SM00388	His Kinase A (phosphoacceptor) domain
AOY38_RS00600	SM00322	K homology RNA-binding domain
AOY38_RS00615	SM00642	Alpha-amylase domain
AOY38_RS00700	SM00062	Bacterial periplasmic substrate-binding proteins
AOY38_RS00720	SM00382	ATPases associated with a variety of cellular activities
AOY38_RS00765	SM00849	Metallo-beta-lactamase superfamily
AOY38_RS00765	SM00903	Flavin reductase like domain
AOY38_RS00775	SM00849	Metallo-beta-lactamase superfamily
AOY38_RS00775	SM00903	Flavin reductase like domain
AOY38_RS00785	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AOY38_RS00785	SM00245	tail specific protease
AOY38_RS00845	SM00387	Histidine kinase-like ATPases
AOY38_RS00855	SM00382	ATPases associated with a variety of cellular activities
AOY38_RS00875	SM00382	ATPases associated with a variety of cellular activities
AOY38_RS00920	SM00567	E-Z type HEAT repeats
AOY38_RS00940	SM00052	Putative diguanylate phosphodiesterase
AOY38_RS00940	SM00091	PAS domain
AOY38_RS00940	SM00240	Forkhead associated domain
AOY38_RS00940	SM00267	diguanylate cyclase
AOY38_RS00945	SM00052	Putative diguanylate phosphodiesterase
AOY38_RS00945	SM00240	Forkhead associated domain
AOY38_RS00945	SM00267	diguanylate cyclase
AOY38_RS00950	SM00052	Putative diguanylate phosphodiesterase
AOY38_RS00950	SM00240	Forkhead associated domain
AOY38_RS00950	SM00267	diguanylate cyclase
AOY38_RS00985	SM00244	prohibitin homologues
AOY38_RS00995	SM00331	Sigma factor PP2C-like phosphatases
AOY38_RS00995	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
AOY38_RS01005	SM00961	Ribulose bisphosphate carboxylase, small chain
AOY38_RS01015	SM00877	AOY38_RS01015
AOY38_RS01020	SM00877	AOY38_RS01020
AOY38_RS01030	SM00248	ankyrin repeats
AOY38_RS01070	SM00327	von Willebrand factor (vWF) type A domain
AOY38_RS01070	SM00382	ATPases associated with a variety of cellular activities
AOY38_RS01090	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
AOY38_RS01090	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
AOY38_RS01105	SM00460	Transglutaminase/protease-like homologues
AOY38_RS01115	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AOY38_RS01120	SM00421	helix_turn_helix, Lux Regulon
AOY38_RS01120	SM00448	cheY-homologous receiver domain
AOY38_RS01165	SM00267	diguanylate cyclase
AOY38_RS01165	SM00448	cheY-homologous receiver domain
AOY38_RS01170	SM00387	Histidine kinase-like ATPases
AOY38_RS01170	SM00388	His Kinase A (phosphoacceptor) domain
AOY38_RS01170	SM00448	cheY-homologous receiver domain
AOY38_RS01235	SM00028	Tetratricopeptide repeats
AOY38_RS01240	SM00271	DnaJ molecular chaperone homology domain
AOY38_RS01260	SM00567	E-Z type HEAT repeats
AOY38_RS01275	SM00267	diguanylate cyclase
AOY38_RS01285	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AOY38_RS01340	SM01329	AOY38_RS01340
AOY38_RS01400	SM00507	HNH nucleases
AOY38_RS01405	SM00984	UDP binding domain
AOY38_RS01450	SM00052	Putative diguanylate phosphodiesterase
AOY38_RS01450	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AOY38_RS01450	SM00091	PAS domain
AOY38_RS01450	SM00267	diguanylate cyclase
AOY38_RS01450	SM00448	cheY-homologous receiver domain
AOY38_RS01520	SM00480	DNA polymerase III beta subunit
AOY38_RS01575	SM01387	AOY38_RS01575
AOY38_RS01670	SM00382	ATPases associated with a variety of cellular activities
AOY38_RS01925	SM00849	Metallo-beta-lactamase superfamily
AOY38_RS01940	SM00387	Histidine kinase-like ATPases
AOY38_RS01940	SM00388	His Kinase A (phosphoacceptor) domain
AOY38_RS01940	SM00448	cheY-homologous receiver domain
AOY38_RS01950	SM00237	Domains in Na-Ca exchangers and integrin-beta4
AOY38_RS02010	SM00448	cheY-homologous receiver domain
AOY38_RS02010	SM00862	Transcriptional regulatory protein, C terminal
AOY38_RS02020	SM00849	Metallo-beta-lactamase superfamily
AOY38_RS02025	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
AOY38_RS02025	SM01080	AOY38_RS02025
AOY38_RS02050	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AOY38_RS02050	SM00267	diguanylate cyclase
AOY38_RS02050	SM00448	cheY-homologous receiver domain
AOY38_RS02090	SM00382	ATPases associated with a variety of cellular activities
AOY38_RS02090	SM00393	Putative single-stranded nucleic acids-binding domain
AOY38_RS02125	SM00363	S4 RNA-binding domain
AOY38_RS02130	SM00052	Putative diguanylate phosphodiesterase
AOY38_RS02135	SM00448	cheY-homologous receiver domain
AOY38_RS02185	SM00729	Elongator protein 3, MiaB family, Radical SAM
AOY38_RS02240	SM00382	ATPases associated with a variety of cellular activities
AOY38_RS02320	SM00448	cheY-homologous receiver domain
AOY38_RS02325	SM00448	cheY-homologous receiver domain
AOY38_RS02330	SM00260	Two component signalling adaptor domain
AOY38_RS02335	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AOY38_RS02335	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AOY38_RS02350	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AOY38_RS02350	SM00267	diguanylate cyclase
AOY38_RS02360	SM00271	DnaJ molecular chaperone homology domain
AOY38_RS02425	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AOY38_RS02425	SM00091	PAS domain
AOY38_RS02425	SM00387	Histidine kinase-like ATPases
AOY38_RS02425	SM00388	His Kinase A (phosphoacceptor) domain
AOY38_RS02440	SM00382	ATPases associated with a variety of cellular activities
AOY38_RS02450	SM00912	haemagglutination activity domain
AOY38_RS02465	SM01230	AOY38_RS02465
AOY38_RS02470	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AOY38_RS02470	SM00073	Histidine Phosphotransfer domain
AOY38_RS02470	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AOY38_RS02470	SM00091	PAS domain
AOY38_RS02470	SM00387	Histidine kinase-like ATPases
AOY38_RS02470	SM00388	His Kinase A (phosphoacceptor) domain
AOY38_RS02470	SM00448	cheY-homologous receiver domain
AOY38_RS02470	SM01079	AOY38_RS02470
AOY38_RS02475	SM00267	diguanylate cyclase
AOY38_RS02475	SM00448	cheY-homologous receiver domain
AOY38_RS02540	SM00244	prohibitin homologues
AOY38_RS02555	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
AOY38_RS02570	SM00563	Phosphate acyltransferases
AOY38_RS02640	SM00861	Transketolase, pyrimidine binding domain
AOY38_RS02675	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
AOY38_RS02700	SM00434	DNA Topoisomerase IV
AOY38_RS02705	SM00448	cheY-homologous receiver domain
AOY38_RS02745	SM00382	ATPases associated with a variety of cellular activities
AOY38_RS02760	SM00112	Cadherin repeats.
AOY38_RS02770	SM00028	Tetratricopeptide repeats
AOY38_RS02800	SM00271	DnaJ molecular chaperone homology domain
AOY38_RS02850	SM00421	helix_turn_helix, Lux Regulon
AOY38_RS02850	SM00448	cheY-homologous receiver domain
AOY38_RS02855	SM00646	AOY38_RS02855
AOY38_RS02970	SM00729	Elongator protein 3, MiaB family, Radical SAM
AOY38_RS03025	SM00829	Enoylreductase
AOY38_RS03035	SM00108	Bulb-type mannose-specific lectin
AOY38_RS03035	SM00191	Integrin alpha (beta-propellor repeats).
AOY38_RS03035	SM00237	Domains in Na-Ca exchangers and integrin-beta4
AOY38_RS03035	SM00560	LamG-like jellyroll fold domain
AOY38_RS03040	SM00382	ATPases associated with a variety of cellular activities
AOY38_RS03090	SM00448	cheY-homologous receiver domain
AOY38_RS03180	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AOY38_RS03180	SM00091	PAS domain
AOY38_RS03200	SM00073	Histidine Phosphotransfer domain
AOY38_RS03200	SM00260	Two component signalling adaptor domain
AOY38_RS03200	SM00387	Histidine kinase-like ATPases
AOY38_RS03200	SM00448	cheY-homologous receiver domain
AOY38_RS03200	SM01231	AOY38_RS03200
AOY38_RS03205	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AOY38_RS03205	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AOY38_RS03210	SM00260	Two component signalling adaptor domain
AOY38_RS03215	SM00448	cheY-homologous receiver domain
AOY38_RS03220	SM00448	cheY-homologous receiver domain
AOY38_RS03230	SM00955	AOY38_RS03230
AOY38_RS03240	SM00382	ATPases associated with a variety of cellular activities
AOY38_RS03250	SM00899	AOY38_RS03250
AOY38_RS03265	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AOY38_RS03265	SM00091	PAS domain
AOY38_RS03265	SM00387	Histidine kinase-like ATPases
AOY38_RS03265	SM00388	His Kinase A (phosphoacceptor) domain
AOY38_RS03305	SM00729	Elongator protein 3, MiaB family, Radical SAM
AOY38_RS03330	SM00292	breast cancer carboxy-terminal domain
AOY38_RS03360	SM01094	CpcD/allophycocyanin linker domain
AOY38_RS03365	SM01094	CpcD/allophycocyanin linker domain
AOY38_RS03370	SM01094	CpcD/allophycocyanin linker domain
AOY38_RS03400	SM00220	Serine/Threonine protein kinases, catalytic domain
AOY38_RS03450	SM00240	Forkhead associated domain
AOY38_RS03460	SM00382	ATPases associated with a variety of cellular activities
AOY38_RS03525	SM00327	von Willebrand factor (vWF) type A domain
AOY38_RS03530	SM00100	Cyclic nucleotide-monophosphate binding domain
AOY38_RS03530	SM00419	helix_turn_helix, cAMP Regulatory protein
AOY38_RS03555	SM00382	ATPases associated with a variety of cellular activities
AOY38_RS03570	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
AOY38_RS03575	SM00448	cheY-homologous receiver domain
AOY38_RS03585	SM00729	Elongator protein 3, MiaB family, Radical SAM
AOY38_RS03615	SM00670	Large family of predicted nucleotide-binding domains
AOY38_RS03630	SM00316	Ribosomal protein S1-like RNA-binding domain
AOY38_RS03630	SM00357	Cold shock protein domain
AOY38_RS03630	SM00955	AOY38_RS03630
AOY38_RS03640	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AOY38_RS03640	SM00331	Sigma factor PP2C-like phosphatases
AOY38_RS03665	SM00729	Elongator protein 3, MiaB family, Radical SAM
AOY38_RS03695	SM00382	ATPases associated with a variety of cellular activities
AOY38_RS03725	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AOY38_RS03730	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AOY38_RS03730	SM00267	diguanylate cyclase
AOY38_RS03735	SM00831	Cation transporter/ATPase, N-terminus
AOY38_RS03760	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AOY38_RS03760	SM00387	Histidine kinase-like ATPases
AOY38_RS03760	SM00388	His Kinase A (phosphoacceptor) domain
AOY38_RS03770	SM00382	ATPases associated with a variety of cellular activities
AOY38_RS03790	SM00861	Transketolase, pyrimidine binding domain
AOY38_RS03795	SM00825	Beta-ketoacyl synthase
AOY38_RS03830	SM00788	Adenylosuccinate synthetase
AOY38_RS03865	SM00662	RNA polymerases D
AOY38_RS03880	SM00316	Ribosomal protein S1-like RNA-binding domain
AOY38_RS03925	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
AOY38_RS03930	SM01374	AOY38_RS03930
AOY38_RS03950	SM00322	K homology RNA-binding domain
AOY38_RS03965	SM01382	AOY38_RS03965
AOY38_RS03965	SM01383	AOY38_RS03965
AOY38_RS04030	SM00382	ATPases associated with a variety of cellular activities
AOY38_RS04075	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AOY38_RS04075	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AOY38_RS04075	SM00091	PAS domain
AOY38_RS04075	SM00387	Histidine kinase-like ATPases
AOY38_RS04075	SM00388	His Kinase A (phosphoacceptor) domain
AOY38_RS04090	SM00968	SMC proteins Flexible Hinge Domain
AOY38_RS04110	SM00028	Tetratricopeptide repeats
AOY38_RS04135	SM00853	MutL C terminal dimerisation domain
AOY38_RS04135	SM01340	AOY38_RS04135
AOY38_RS04160	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AOY38_RS04185	SM01007	Class II Aldolase and Adducin N-terminal domain
AOY38_RS04205	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AOY38_RS04205	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AOY38_RS04205	SM00091	PAS domain
AOY38_RS04205	SM00387	Histidine kinase-like ATPases
AOY38_RS04210	SM00342	helix_turn_helix, arabinose operon control protein
AOY38_RS04210	SM00448	cheY-homologous receiver domain
AOY38_RS04215	SM00448	cheY-homologous receiver domain
AOY38_RS04235	SM00116	Domain in cystathionine beta-synthase and other proteins.
AOY38_RS04235	SM00924	MgtE intracellular N domain
AOY38_RS04295	SM00883	Chaperonin 10 Kd subunit
AOY38_RS04305	SM00052	Putative diguanylate phosphodiesterase
AOY38_RS04305	SM00062	Bacterial periplasmic substrate-binding proteins
AOY38_RS04305	SM00267	diguanylate cyclase
AOY38_RS04340	SM00649	Ribosomal protein L11/L12
AOY38_RS04345	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
AOY38_RS04345	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
AOY38_RS04410	SM00554	Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.
AOY38_RS04450	SM00382	ATPases associated with a variety of cellular activities
AOY38_RS04470	SM00448	cheY-homologous receiver domain
AOY38_RS04470	SM00862	Transcriptional regulatory protein, C terminal
AOY38_RS04475	SM00861	Transketolase, pyrimidine binding domain
AOY38_RS04480	SM00877	AOY38_RS04480
AOY38_RS04485	SM00877	AOY38_RS04485
AOY38_RS04540	SM00411	bacterial (prokaryotic) histone like domain
AOY38_RS04555	SM00487	DEAD-like helicases superfamily
AOY38_RS04555	SM00490	helicase superfamily c-terminal domain
AOY38_RS04645	SM00382	ATPases associated with a variety of cellular activities
AOY38_RS04705	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AOY38_RS04715	SM00382	ATPases associated with a variety of cellular activities
AOY38_RS04720	SM00382	ATPases associated with a variety of cellular activities
AOY38_RS04740	SM00855	Phosphoglycerate mutase family
AOY38_RS04750	SM00864	Tubulin/FtsZ family, GTPase domain
AOY38_RS04750	SM00865	Tubulin/FtsZ family, C-terminal domain
AOY38_RS04760	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AOY38_RS04760	SM00245	tail specific protease
AOY38_RS04780	SM00988	UreE urease accessory protein, N-terminal domain
AOY38_RS04810	SM00382	ATPases associated with a variety of cellular activities
AOY38_RS04815	SM00220	Serine/Threonine protein kinases, catalytic domain
AOY38_RS04950	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
AOY38_RS04950	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
AOY38_RS05010	SM00305	Hint (Hedgehog/Intein) domain C-terminal region
AOY38_RS05010	SM00306	Hint (Hedgehog/Intein) domain N-terminal region
AOY38_RS05010	SM00382	ATPases associated with a variety of cellular activities
AOY38_RS05025	SM00835	Cupin
AOY38_RS05055	SM00220	Serine/Threonine protein kinases, catalytic domain
AOY38_RS05060	SM00880	AOY38_RS05060
AOY38_RS05080	SM00387	Histidine kinase-like ATPases
AOY38_RS05080	SM00388	His Kinase A (phosphoacceptor) domain
AOY38_RS05145	SM00316	Ribosomal protein S1-like RNA-binding domain
AOY38_RS05165	SM00382	ATPases associated with a variety of cellular activities
AOY38_RS05190	SM00729	Elongator protein 3, MiaB family, Radical SAM
AOY38_RS05190	SM00876	Biotin and Thiamin Synthesis associated domain
AOY38_RS05225	SM00062	Bacterial periplasmic substrate-binding proteins
AOY38_RS05225	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AOY38_RS05275	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AOY38_RS05290	SM00360	RNA recognition motif
AOY38_RS05300	SM00257	Lysin motif
AOY38_RS05350	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AOY38_RS05370	SM00729	Elongator protein 3, MiaB family, Radical SAM
AOY38_RS05380	SM00822	AOY38_RS05380
AOY38_RS05415	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AOY38_RS05415	SM00465	GIY-YIG type nucleases (URI domain)
AOY38_RS05420	SM00287	Bacterial SH3 domain homologues
AOY38_RS05420	SM00646	AOY38_RS05420
AOY38_RS05425	SM00232	JAB/MPN domain
AOY38_RS05485	SM00191	Integrin alpha (beta-propellor repeats).
AOY38_RS05485	SM00237	Domains in Na-Ca exchangers and integrin-beta4
AOY38_RS05505	SM00320	WD40 repeats
AOY38_RS05510	SM00320	WD40 repeats
AOY38_RS05575	SM00642	Alpha-amylase domain
AOY38_RS05585	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AOY38_RS05585	SM00331	Sigma factor PP2C-like phosphatases
AOY38_RS05620	SM01133	AOY38_RS05620
AOY38_RS05655	SM00704	CDGSH-type zinc finger. Function unknown.
AOY38_RS05670	SM00463	Small MutS-related domain
AOY38_RS05670	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
AOY38_RS05670	SM00534	ATPase domain of DNA mismatch repair MUTS family
AOY38_RS05675	SM00331	Sigma factor PP2C-like phosphatases
AOY38_RS05675	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
AOY38_RS05735	SM00567	E-Z type HEAT repeats
AOY38_RS05760	SM00062	Bacterial periplasmic substrate-binding proteins
AOY38_RS05795	SM00382	ATPases associated with a variety of cellular activities
AOY38_RS05800	SM00904	Riboflavin kinase
AOY38_RS05815	SM01093	AOY38_RS05815
AOY38_RS05825	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AOY38_RS05910	SM00507	HNH nucleases
AOY38_RS05920	SM00305	Hint (Hedgehog/Intein) domain C-terminal region
AOY38_RS05920	SM00306	Hint (Hedgehog/Intein) domain N-terminal region
AOY38_RS05920	SM00387	Histidine kinase-like ATPases
AOY38_RS05920	SM00433	TopoisomeraseII
AOY38_RS05980	SM00421	helix_turn_helix, Lux Regulon
AOY38_RS05980	SM00448	cheY-homologous receiver domain
AOY38_RS05985	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AOY38_RS05985	SM00387	Histidine kinase-like ATPases
AOY38_RS05985	SM00388	His Kinase A (phosphoacceptor) domain
AOY38_RS06120	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AOY38_RS06120	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AOY38_RS06120	SM00091	PAS domain
AOY38_RS06120	SM00267	diguanylate cyclase
AOY38_RS06125	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AOY38_RS06130	SM00478	endonuclease III
AOY38_RS06130	SM00525	AOY38_RS06130
AOY38_RS06155	SM00028	Tetratricopeptide repeats
AOY38_RS06165	SM00382	ATPases associated with a variety of cellular activities
AOY38_RS06185	SM00448	cheY-homologous receiver domain
AOY38_RS06185	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AOY38_RS06190	SM00382	ATPases associated with a variety of cellular activities
AOY38_RS06250	SM00646	AOY38_RS06250
AOY38_RS06340	SM00382	ATPases associated with a variety of cellular activities
AOY38_RS06340	SM00760	Bacterial dnaA protein helix-turn-helix domain
AOY38_RS06380	SM00642	Alpha-amylase domain
AOY38_RS06385	SM00382	ATPases associated with a variety of cellular activities
AOY38_RS06400	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
AOY38_RS06405	SM00028	Tetratricopeptide repeats
AOY38_RS06445	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
AOY38_RS06445	SM00534	ATPase domain of DNA mismatch repair MUTS family
AOY38_RS06470	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
AOY38_RS06530	SM00382	ATPases associated with a variety of cellular activities
AOY38_RS06590	SM00062	Bacterial periplasmic substrate-binding proteins
AOY38_RS06590	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AOY38_RS06600	SM00849	Metallo-beta-lactamase superfamily
AOY38_RS06610	SM00450	Rhodanese Homology Domain
AOY38_RS06625	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AOY38_RS06645	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AOY38_RS06655	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
AOY38_RS06655	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
AOY38_RS06655	SM00493	AOY38_RS06655
AOY38_RS06660	SM00930	AOY38_RS06660
AOY38_RS06665	SM00563	Phosphate acyltransferases
AOY38_RS06715	SM01094	CpcD/allophycocyanin linker domain
AOY38_RS06735	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
AOY38_RS06735	SM00240	Forkhead associated domain
AOY38_RS06750	SM00822	AOY38_RS06750
AOY38_RS06760	SM00073	Histidine Phosphotransfer domain
AOY38_RS06760	SM00091	PAS domain
AOY38_RS06760	SM00387	Histidine kinase-like ATPases
AOY38_RS06760	SM00388	His Kinase A (phosphoacceptor) domain
AOY38_RS06760	SM00448	cheY-homologous receiver domain
AOY38_RS06825	SM00831	Cation transporter/ATPase, N-terminus
AOY38_RS06860	SM00460	Transglutaminase/protease-like homologues
AOY38_RS06910	SM01240	AOY38_RS06910
AOY38_RS06940	SM00382	ATPases associated with a variety of cellular activities
AOY38_RS06955	SM01248	AOY38_RS06955
AOY38_RS06960	SM00382	ATPases associated with a variety of cellular activities
AOY38_RS06980	SM00421	helix_turn_helix, Lux Regulon
AOY38_RS06980	SM00448	cheY-homologous receiver domain
AOY38_RS06985	SM00387	Histidine kinase-like ATPases
AOY38_RS06985	SM00388	His Kinase A (phosphoacceptor) domain
AOY38_RS07165	SM00382	ATPases associated with a variety of cellular activities
AOY38_RS07185	SM00631	AOY38_RS07185
AOY38_RS07325	SM00073	Histidine Phosphotransfer domain
AOY38_RS07325	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AOY38_RS07325	SM00091	PAS domain
AOY38_RS07325	SM00387	Histidine kinase-like ATPases
AOY38_RS07325	SM00388	His Kinase A (phosphoacceptor) domain
AOY38_RS07325	SM00448	cheY-homologous receiver domain
AOY38_RS07330	SM00387	Histidine kinase-like ATPases
AOY38_RS07330	SM00388	His Kinase A (phosphoacceptor) domain
AOY38_RS07330	SM00448	cheY-homologous receiver domain
AOY38_RS07335	SM00448	cheY-homologous receiver domain
AOY38_RS07335	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AOY38_RS07345	SM00382	ATPases associated with a variety of cellular activities
AOY38_RS07345	SM00962	SRP54-type protein, GTPase domain
AOY38_RS07345	SM00963	SRP54-type protein, helical bundle domain
AOY38_RS07355	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AOY38_RS07355	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AOY38_RS07355	SM00091	PAS domain
AOY38_RS07355	SM00387	Histidine kinase-like ATPases
AOY38_RS07355	SM00388	His Kinase A (phosphoacceptor) domain
AOY38_RS07355	SM00448	cheY-homologous receiver domain
AOY38_RS07360	SM01207	AOY38_RS07360
AOY38_RS07395	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AOY38_RS07420	SM00100	Cyclic nucleotide-monophosphate binding domain
AOY38_RS07420	SM00419	helix_turn_helix, cAMP Regulatory protein
AOY38_RS07510	SM01329	AOY38_RS07510
AOY38_RS07595	SM00382	ATPases associated with a variety of cellular activities
AOY38_RS07725	SM01004	Delta-aminolevulinic acid dehydratase
AOY38_RS07780	SM00387	Histidine kinase-like ATPases
AOY38_RS07780	SM00388	His Kinase A (phosphoacceptor) domain
AOY38_RS07780	SM00448	cheY-homologous receiver domain
AOY38_RS07795	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AOY38_RS07795	SM00954	Region found in RelA / SpoT proteins
AOY38_RS07800	SM00996	S-adenosyl-L-homocysteine hydrolase
AOY38_RS07800	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
AOY38_RS07810	SM00670	Large family of predicted nucleotide-binding domains
AOY38_RS07815	SM00460	Transglutaminase/protease-like homologues
AOY38_RS07830	SM00387	Histidine kinase-like ATPases
AOY38_RS07830	SM00388	His Kinase A (phosphoacceptor) domain
AOY38_RS07830	SM00448	cheY-homologous receiver domain
AOY38_RS07835	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AOY38_RS07835	SM00387	Histidine kinase-like ATPases
AOY38_RS07835	SM00388	His Kinase A (phosphoacceptor) domain
AOY38_RS07835	SM00448	cheY-homologous receiver domain
AOY38_RS07840	SM00382	ATPases associated with a variety of cellular activities
AOY38_RS07855	SM00825	Beta-ketoacyl synthase
AOY38_RS07880	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
AOY38_RS07890	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
AOY38_RS07990	SM00244	prohibitin homologues
AOY38_RS08100	SM00831	Cation transporter/ATPase, N-terminus
AOY38_RS08105	SM00028	Tetratricopeptide repeats
AOY38_RS08180	SM00327	von Willebrand factor (vWF) type A domain
AOY38_RS08220	SM00116	Domain in cystathionine beta-synthase and other proteins.
AOY38_RS08225	SM00363	S4 RNA-binding domain
AOY38_RS08235	SM00028	Tetratricopeptide repeats
AOY38_RS08255	SM00947	Carbonic anhydrase
AOY38_RS08305	SM00729	Elongator protein 3, MiaB family, Radical SAM
AOY38_RS08310	SM00028	Tetratricopeptide repeats
AOY38_RS08350	SM00479	AOY38_RS08350
AOY38_RS08405	SM00028	Tetratricopeptide repeats
AOY38_RS08420	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AOY38_RS08420	SM00387	Histidine kinase-like ATPases
AOY38_RS08420	SM00388	His Kinase A (phosphoacceptor) domain
AOY38_RS08420	SM00448	cheY-homologous receiver domain
AOY38_RS08440	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AOY38_RS08440	SM00387	Histidine kinase-like ATPases
AOY38_RS08440	SM00388	His Kinase A (phosphoacceptor) domain
AOY38_RS08450	SM00670	Large family of predicted nucleotide-binding domains
AOY38_RS08465	SM00382	ATPases associated with a variety of cellular activities
AOY38_RS08480	SM00028	Tetratricopeptide repeats
AOY38_RS08495	SM00448	cheY-homologous receiver domain
AOY38_RS08500	SM00382	ATPases associated with a variety of cellular activities
AOY38_RS08525	SM00729	Elongator protein 3, MiaB family, Radical SAM
AOY38_RS08550	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AOY38_RS08550	SM00387	Histidine kinase-like ATPases
AOY38_RS08550	SM00388	His Kinase A (phosphoacceptor) domain
AOY38_RS08555	SM00448	cheY-homologous receiver domain
AOY38_RS08560	SM00331	Sigma factor PP2C-like phosphatases
AOY38_RS08560	SM00388	His Kinase A (phosphoacceptor) domain
AOY38_RS08560	SM00448	cheY-homologous receiver domain
AOY38_RS08565	SM00382	ATPases associated with a variety of cellular activities
AOY38_RS08575	SM00316	Ribosomal protein S1-like RNA-binding domain
AOY38_RS08580	SM00400	zinc finger
AOY38_RS08580	SM00493	AOY38_RS08580
AOY38_RS08660	SM00393	Putative single-stranded nucleic acids-binding domain
AOY38_RS08665	SM00028	Tetratricopeptide repeats
AOY38_RS08665	SM00271	DnaJ molecular chaperone homology domain
AOY38_RS08755	SM00100	Cyclic nucleotide-monophosphate binding domain
AOY38_RS08755	SM00419	helix_turn_helix, cAMP Regulatory protein
AOY38_RS08780	SM00100	Cyclic nucleotide-monophosphate binding domain
AOY38_RS08780	SM00382	ATPases associated with a variety of cellular activities
AOY38_RS08790	SM00663	RNA polymerase I subunit A N-terminus
AOY38_RS08900	SM00091	PAS domain
AOY38_RS08900	SM00267	diguanylate cyclase
AOY38_RS08905	SM00100	Cyclic nucleotide-monophosphate binding domain
AOY38_RS08910	SM00388	His Kinase A (phosphoacceptor) domain
AOY38_RS08975	SM00100	Cyclic nucleotide-monophosphate binding domain
AOY38_RS09005	SM00382	ATPases associated with a variety of cellular activities
AOY38_RS09005	SM00962	SRP54-type protein, GTPase domain
AOY38_RS09005	SM00963	SRP54-type protein, helical bundle domain
AOY38_RS09020	SM00845	GatB domain
AOY38_RS09060	SM00062	Bacterial periplasmic substrate-binding proteins
AOY38_RS09075	SM01403	AOY38_RS09075
AOY38_RS09085	SM00838	Elongation factor G C-terminus
AOY38_RS09085	SM00889	Elongation factor G, domain IV
AOY38_RS09105	SM01209	AOY38_RS09105
AOY38_RS09105	SM01210	AOY38_RS09105
AOY38_RS09260	SM00967	RNA 2'-O ribose methyltransferase substrate binding
AOY38_RS09300	SM00917	LeuA allosteric (dimerisation) domain
AOY38_RS09365	SM00240	Forkhead associated domain
AOY38_RS09375	SM00567	E-Z type HEAT repeats
AOY38_RS09385	SM00881	CoA binding domain
AOY38_RS09395	SM00387	Histidine kinase-like ATPases
AOY38_RS09395	SM00388	His Kinase A (phosphoacceptor) domain
AOY38_RS09395	SM00448	cheY-homologous receiver domain
AOY38_RS09405	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
AOY38_RS09405	SM01232	AOY38_RS09405
AOY38_RS09420	SM00052	Putative diguanylate phosphodiesterase
AOY38_RS09425	SM00448	cheY-homologous receiver domain
AOY38_RS09430	SM01034	Sensors of blue-light using FAD
AOY38_RS09435	SM00873	B3/4 domain
AOY38_RS09435	SM00874	tRNA synthetase B5 domain
AOY38_RS09435	SM00896	Ferredoxin-fold anticodon binding domain
AOY38_RS09440	SM00220	Serine/Threonine protein kinases, catalytic domain
AOY38_RS09445	SM00421	helix_turn_helix, Lux Regulon
AOY38_RS09445	SM00448	cheY-homologous receiver domain
AOY38_RS09525	SM00226	Low molecular weight phosphatase family
AOY38_RS09530	SM00448	cheY-homologous receiver domain
AOY38_RS09530	SM00862	Transcriptional regulatory protein, C terminal
AOY38_RS09545	SM00382	ATPases associated with a variety of cellular activities
AOY38_RS09555	SM00363	S4 RNA-binding domain
AOY38_RS09565	SM00028	Tetratricopeptide repeats
AOY38_RS09570	SM00271	DnaJ molecular chaperone homology domain
AOY38_RS09595	SM00535	Ribonuclease III family
AOY38_RS09600	SM00967	RNA 2'-O ribose methyltransferase substrate binding
AOY38_RS09610	SM00840	AOY38_RS09610
AOY38_RS09670	SM00905	Dihydroneopterin aldolase
AOY38_RS09680	SM00450	Rhodanese Homology Domain
AOY38_RS09690	SM00363	S4 RNA-binding domain
AOY38_RS09770	SM00382	ATPases associated with a variety of cellular activities
AOY38_RS09770	SM01086	C-terminal, D2-small domain, of ClpB protein
AOY38_RS09785	SM01094	CpcD/allophycocyanin linker domain
AOY38_RS09795	SM00028	Tetratricopeptide repeats
AOY38_RS09805	SM00358	Double-stranded RNA binding motif
AOY38_RS09805	SM00535	Ribonuclease III family
AOY38_RS09840	SM00849	Metallo-beta-lactamase superfamily
AOY38_RS09840	SM00903	Flavin reductase like domain
AOY38_RS09855	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
AOY38_RS09915	SM00729	Elongator protein 3, MiaB family, Radical SAM
AOY38_RS09935	SM00998	Adenylosuccinate lyase C-terminus
AOY38_RS09970	SM00382	ATPases associated with a variety of cellular activities
AOY38_RS10000	SM00487	DEAD-like helicases superfamily
AOY38_RS10000	SM00490	helicase superfamily c-terminal domain
AOY38_RS10015	SM00052	Putative diguanylate phosphodiesterase
AOY38_RS10015	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AOY38_RS10015	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AOY38_RS10015	SM00091	PAS domain
AOY38_RS10015	SM00267	diguanylate cyclase
AOY38_RS10015	SM01079	AOY38_RS10015
AOY38_RS10065	SM01091	Transporter associated domain
AOY38_RS10080	SM01230	AOY38_RS10080
AOY38_RS10125	SM00507	HNH nucleases
AOY38_RS10145	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AOY38_RS10200	SM00938	Nitrogen regulatory protein P-II
AOY38_RS10245	SM00191	Integrin alpha (beta-propellor repeats).
AOY38_RS10245	SM00237	Domains in Na-Ca exchangers and integrin-beta4
AOY38_RS10245	SM00560	LamG-like jellyroll fold domain
AOY38_RS10255	SM00320	WD40 repeats
AOY38_RS10265	SM00989	AOY38_RS10265
AOY38_RS10280	SM00989	AOY38_RS10280
AOY38_RS10300	SM00028	Tetratricopeptide repeats
AOY38_RS10305	SM00220	Serine/Threonine protein kinases, catalytic domain
AOY38_RS10350	SM00382	ATPases associated with a variety of cellular activities
AOY38_RS10350	SM01086	C-terminal, D2-small domain, of ClpB protein
AOY38_RS10370	SM00382	ATPases associated with a variety of cellular activities
AOY38_RS10390	SM01011	Aminopeptidase P, N-terminal domain
AOY38_RS10435	SM00937	AOY38_RS10435
AOY38_RS10445	SM00116	Domain in cystathionine beta-synthase and other proteins.
AOY38_RS10535	SM00562	AOY38_RS10535
AOY38_RS10570	SM00563	Phosphate acyltransferases
AOY38_RS10630	SM00235	Zinc-dependent metalloprotease
AOY38_RS10650	SM00240	Forkhead associated domain
AOY38_RS10670	SM00257	Lysin motif
AOY38_RS10705	SM00729	Elongator protein 3, MiaB family, Radical SAM
AOY38_RS10720	SM00448	cheY-homologous receiver domain
AOY38_RS10720	SM01231	AOY38_RS10720
AOY38_RS10725	SM00872	Alpha mannosidase, middle domain
AOY38_RS10760	SM00226	Low molecular weight phosphatase family
AOY38_RS10785	SM00421	helix_turn_helix, Lux Regulon
AOY38_RS10830	SM00933	AOY38_RS10830
AOY38_RS10855	SM00877	AOY38_RS10855
AOY38_RS10860	SM00028	Tetratricopeptide repeats
AOY38_RS10865	SM00116	Domain in cystathionine beta-synthase and other proteins.
AOY38_RS10870	SM00857	Resolvase, N terminal domain
AOY38_RS10895	SM00062	Bacterial periplasmic substrate-binding proteins
AOY38_RS10920	SM00271	DnaJ molecular chaperone homology domain
AOY38_RS10940	SM00320	WD40 repeats
AOY38_RS10985	SM00642	Alpha-amylase domain
AOY38_RS11015	SM00917	LeuA allosteric (dimerisation) domain
AOY38_RS11020	SM00052	Putative diguanylate phosphodiesterase
AOY38_RS11020	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AOY38_RS11020	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AOY38_RS11020	SM00091	PAS domain
AOY38_RS11020	SM00267	diguanylate cyclase
AOY38_RS11030	SM00363	S4 RNA-binding domain
AOY38_RS11055	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
AOY38_RS11070	SM00091	PAS domain
AOY38_RS11070	SM00387	Histidine kinase-like ATPases
AOY38_RS11070	SM00388	His Kinase A (phosphoacceptor) domain
AOY38_RS11090	SM00382	ATPases associated with a variety of cellular activities
AOY38_RS11130	SM00822	AOY38_RS11130
AOY38_RS11145	SM01350	AOY38_RS11145
AOY38_RS11240	SM00450	Rhodanese Homology Domain
AOY38_RS11250	SM00382	ATPases associated with a variety of cellular activities
AOY38_RS11270	SM00382	ATPases associated with a variety of cellular activities
AOY38_RS11330	SM00387	Histidine kinase-like ATPases
AOY38_RS11330	SM00388	His Kinase A (phosphoacceptor) domain
AOY38_RS11330	SM01248	AOY38_RS11330
AOY38_RS11335	SM00909	Sporulation and spore germination
AOY38_RS11350	SM00062	Bacterial periplasmic substrate-binding proteins
AOY38_RS11380	SM00358	Double-stranded RNA binding motif
AOY38_RS11380	SM00535	Ribonuclease III family
AOY38_RS11400	SM00474	3'-5' exonuclease
AOY38_RS11445	SM00028	Tetratricopeptide repeats
AOY38_RS11450	SM00382	ATPases associated with a variety of cellular activities
AOY38_RS11525	SM00903	Flavin reductase like domain
AOY38_RS11535	SM00382	ATPases associated with a variety of cellular activities
AOY38_RS11535	SM01086	C-terminal, D2-small domain, of ClpB protein
AOY38_RS11555	SM00925	MltA specific insert domain
AOY38_RS11570	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AOY38_RS11570	SM00245	tail specific protease
AOY38_RS11585	SM00961	Ribulose bisphosphate carboxylase, small chain
AOY38_RS11660	SM00487	DEAD-like helicases superfamily
AOY38_RS11660	SM00490	helicase superfamily c-terminal domain
AOY38_RS11745	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AOY38_RS11745	SM00091	PAS domain
AOY38_RS11745	SM00387	Histidine kinase-like ATPases
AOY38_RS11745	SM00388	His Kinase A (phosphoacceptor) domain
AOY38_RS11745	SM00448	cheY-homologous receiver domain
AOY38_RS11750	SM01228	AOY38_RS11750
AOY38_RS11785	SM00382	ATPases associated with a variety of cellular activities
AOY38_RS11790	SM00464	Found in ATP-dependent protease La (LON)
AOY38_RS11815	SM00478	endonuclease III
AOY38_RS11835	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
AOY38_RS11845	SM00382	ATPases associated with a variety of cellular activities
AOY38_RS11880	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AOY38_RS11890	SM00841	Elongation factor P, C-terminal
AOY38_RS11890	SM01185	AOY38_RS11890
AOY38_RS11900	SM00877	AOY38_RS11900
AOY38_RS11905	SM00670	Large family of predicted nucleotide-binding domains
AOY38_RS11940	SM00320	WD40 repeats
AOY38_RS11955	SM00855	Phosphoglycerate mutase family
AOY38_RS11975	SM00849	Metallo-beta-lactamase superfamily
AOY38_RS11980	SM00530	Helix-turn-helix XRE-family like proteins 
AOY38_RS11995	SM00947	Carbonic anhydrase
AOY38_RS12005	SM00567	E-Z type HEAT repeats
AOY38_RS12050	SM00062	Bacterial periplasmic substrate-binding proteins
AOY38_RS12115	SM00981	AOY38_RS12115
AOY38_RS12140	SM00878	Biotin carboxylase C-terminal domain
AOY38_RS12160	SM00382	ATPases associated with a variety of cellular activities
AOY38_RS12170	SM00363	S4 RNA-binding domain
AOY38_RS12170	SM01390	AOY38_RS12170
AOY38_RS12190	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AOY38_RS12190	SM00091	PAS domain
AOY38_RS12190	SM00387	Histidine kinase-like ATPases
AOY38_RS12190	SM00388	His Kinase A (phosphoacceptor) domain
AOY38_RS12195	SM00448	cheY-homologous receiver domain
AOY38_RS12200	SM00487	DEAD-like helicases superfamily
AOY38_RS12200	SM00490	helicase superfamily c-terminal domain
AOY38_RS12225	SM00382	ATPases associated with a variety of cellular activities
AOY38_RS12240	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AOY38_RS12240	SM00387	Histidine kinase-like ATPases
AOY38_RS12240	SM00388	His Kinase A (phosphoacceptor) domain
AOY38_RS12245	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AOY38_RS12245	SM00091	PAS domain
AOY38_RS12340	SM00382	ATPases associated with a variety of cellular activities
AOY38_RS12345	SM00382	ATPases associated with a variety of cellular activities
AOY38_RS12395	SM00849	Metallo-beta-lactamase superfamily
AOY38_RS12400	SM00957	SecA DEAD-like domain
AOY38_RS12400	SM00958	SecA preprotein cross-linking domain
AOY38_RS12415	SM00382	ATPases associated with a variety of cellular activities
AOY38_RS12460	SM00387	Histidine kinase-like ATPases
AOY38_RS12460	SM00388	His Kinase A (phosphoacceptor) domain
AOY38_RS12500	SM00331	Sigma factor PP2C-like phosphatases
AOY38_RS12500	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
AOY38_RS12505	SM00327	von Willebrand factor (vWF) type A domain
AOY38_RS12535	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AOY38_RS12545	SM00448	cheY-homologous receiver domain
AOY38_RS12545	SM00862	Transcriptional regulatory protein, C terminal
AOY38_RS12550	SM00855	Phosphoglycerate mutase family
AOY38_RS12575	SM00434	DNA Topoisomerase IV
AOY38_RS12585	SM00382	ATPases associated with a variety of cellular activities
AOY38_RS12645	SM00487	DEAD-like helicases superfamily
AOY38_RS12645	SM00490	helicase superfamily c-terminal domain
AOY38_RS12645	SM00982	AOY38_RS12645
AOY38_RS12645	SM01058	CarD-like/TRCF domain
AOY38_RS12660	SM00382	ATPases associated with a variety of cellular activities
AOY38_RS12690	SM00851	MGS-like domain
AOY38_RS12690	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
AOY38_RS12710	SM00852	Probable molybdopterin binding domain
AOY38_RS12730	SM00450	Rhodanese Homology Domain
AOY38_RS12735	SM00360	RNA recognition motif
AOY38_RS12755	SM00155	Phospholipase D. Active site motifs.
AOY38_RS12755	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AOY38_RS12760	SM00959	Rho termination factor, N-terminal domain
AOY38_RS12785	SM00028	Tetratricopeptide repeats
AOY38_RS12790	SM00382	ATPases associated with a variety of cellular activities
AOY38_RS12845	SM00387	Histidine kinase-like ATPases
AOY38_RS12845	SM00388	His Kinase A (phosphoacceptor) domain
AOY38_RS12860	SM01234	AOY38_RS12860
AOY38_RS12865	SM01018	B12 binding domain
AOY38_RS12905	SM00028	Tetratricopeptide repeats
AOY38_RS12920	SM00637	AOY38_RS12920
AOY38_RS12930	SM01116	AOY38_RS12930
AOY38_RS12935	SM00852	Probable molybdopterin binding domain
AOY38_RS12940	SM00729	Elongator protein 3, MiaB family, Radical SAM
AOY38_RS12965	SM00382	ATPases associated with a variety of cellular activities
AOY38_RS12970	SM00729	Elongator protein 3, MiaB family, Radical SAM
AOY38_RS13100	SM00756	AOY38_RS13100
AOY38_RS13105	SM00849	Metallo-beta-lactamase superfamily
AOY38_RS13105	SM00903	Flavin reductase like domain
AOY38_RS13110	SM00481	DNA polymerase alpha chain like domain
AOY38_RS13130	SM00014	Acid phosphatase homologues
AOY38_RS13240	SM01005	Alanine racemase, C-terminal domain
AOY38_RS13250	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AOY38_RS13250	SM00091	PAS domain
AOY38_RS13250	SM00267	diguanylate cyclase
AOY38_RS13250	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AOY38_RS13265	SM00732	Likely ribonuclease with RNase H fold.
AOY38_RS13275	SM00305	Hint (Hedgehog/Intein) domain C-terminal region
AOY38_RS13275	SM00306	Hint (Hedgehog/Intein) domain N-terminal region
AOY38_RS13295	SM00838	Elongation factor G C-terminus
AOY38_RS13295	SM00889	Elongation factor G, domain IV
AOY38_RS13330	SM00052	Putative diguanylate phosphodiesterase
AOY38_RS13330	SM00100	Cyclic nucleotide-monophosphate binding domain
AOY38_RS13375	SM00052	Putative diguanylate phosphodiesterase
AOY38_RS13375	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AOY38_RS13375	SM00267	diguanylate cyclase
AOY38_RS13395	SM00073	Histidine Phosphotransfer domain
AOY38_RS13465	SM00448	cheY-homologous receiver domain
AOY38_RS13465	SM00862	Transcriptional regulatory protein, C terminal
AOY38_RS13470	SM00729	Elongator protein 3, MiaB family, Radical SAM
AOY38_RS13475	SM00487	DEAD-like helicases superfamily
AOY38_RS13475	SM00490	helicase superfamily c-terminal domain
AOY38_RS13480	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AOY38_RS13490	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AOY38_RS13525	SM00271	DnaJ molecular chaperone homology domain
AOY38_RS13545	SM00382	ATPases associated with a variety of cellular activities
AOY38_RS13565	SM01248	AOY38_RS13565
AOY38_RS13570	SM00448	cheY-homologous receiver domain
AOY38_RS13575	SM00382	ATPases associated with a variety of cellular activities
AOY38_RS13620	SM00100	Cyclic nucleotide-monophosphate binding domain
AOY38_RS13665	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AOY38_RS13665	SM00387	Histidine kinase-like ATPases
AOY38_RS13665	SM00388	His Kinase A (phosphoacceptor) domain
AOY38_RS13685	SM01211	AOY38_RS13685
AOY38_RS13710	SM01400	AOY38_RS13710
AOY38_RS13740	SM00419	helix_turn_helix, cAMP Regulatory protein
AOY38_RS13750	SM00382	ATPases associated with a variety of cellular activities
AOY38_RS13835	SM00028	Tetratricopeptide repeats
AOY38_RS13865	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AOY38_RS13870	SM00327	von Willebrand factor (vWF) type A domain
AOY38_RS13935	SM00387	Histidine kinase-like ATPases
AOY38_RS13935	SM00388	His Kinase A (phosphoacceptor) domain
AOY38_RS13955	SM00331	Sigma factor PP2C-like phosphatases
AOY38_RS13960	SM00448	cheY-homologous receiver domain
AOY38_RS13960	SM00862	Transcriptional regulatory protein, C terminal
AOY38_RS14025	SM00240	Forkhead associated domain
AOY38_RS14030	SM01059	Chloramphenicol acetyltransferase
AOY38_RS14045	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AOY38_RS14045	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AOY38_RS14045	SM00091	PAS domain
AOY38_RS14045	SM00267	diguanylate cyclase
AOY38_RS14085	SM00729	Elongator protein 3, MiaB family, Radical SAM
AOY38_RS14105	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AOY38_RS14105	SM00091	PAS domain
AOY38_RS14105	SM00387	Histidine kinase-like ATPases
AOY38_RS14110	SM00421	helix_turn_helix, Lux Regulon
AOY38_RS14110	SM00448	cheY-homologous receiver domain
AOY38_RS14125	SM00822	AOY38_RS14125
AOY38_RS14200	SM00387	Histidine kinase-like ATPases
AOY38_RS14200	SM00388	His Kinase A (phosphoacceptor) domain
AOY38_RS14205	SM00448	cheY-homologous receiver domain
AOY38_RS14205	SM00862	Transcriptional regulatory protein, C terminal
AOY38_RS14230	SM00422	helix_turn_helix, mercury resistance
AOY38_RS14245	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AOY38_RS14255	SM00387	Histidine kinase-like ATPases
AOY38_RS14255	SM00388	His Kinase A (phosphoacceptor) domain
AOY38_RS14260	SM00448	cheY-homologous receiver domain
AOY38_RS14260	SM00862	Transcriptional regulatory protein, C terminal
AOY38_RS14290	SM00729	Elongator protein 3, MiaB family, Radical SAM
AOY38_RS14310	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AOY38_RS14310	SM00421	helix_turn_helix, Lux Regulon
AOY38_RS14325	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AOY38_RS14325	SM00091	PAS domain
AOY38_RS14325	SM00267	diguanylate cyclase
AOY38_RS14330	SM00240	Forkhead associated domain
AOY38_RS14330	SM00382	ATPases associated with a variety of cellular activities
AOY38_RS14340	SM00220	Serine/Threonine protein kinases, catalytic domain
AOY38_RS14340	SM00287	Bacterial SH3 domain homologues
AOY38_RS14355	SM01118	AOY38_RS14355
AOY38_RS14370	SM00422	helix_turn_helix, mercury resistance
AOY38_RS14415	SM00831	Cation transporter/ATPase, N-terminus
AOY38_RS14430	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
AOY38_RS14430	SM00474	3'-5' exonuclease
AOY38_RS14430	SM00475	5'-3' exonuclease
AOY38_RS14430	SM00482	DNA polymerase A domain
AOY38_RS14460	SM00465	GIY-YIG type nucleases (URI domain)
AOY38_RS14470	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
AOY38_RS14560	SM00890	Domain of unknown function
AOY38_RS14570	SM00382	ATPases associated with a variety of cellular activities
AOY38_RS14585	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AOY38_RS14585	SM00267	diguanylate cyclase
AOY38_RS14610	SM00260	Two component signalling adaptor domain
AOY38_RS14615	SM00073	Histidine Phosphotransfer domain
AOY38_RS14615	SM00260	Two component signalling adaptor domain
AOY38_RS14615	SM00387	Histidine kinase-like ATPases
AOY38_RS14615	SM00448	cheY-homologous receiver domain
AOY38_RS14615	SM01231	AOY38_RS14615
AOY38_RS14620	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AOY38_RS14625	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AOY38_RS14625	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AOY38_RS14625	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AOY38_RS14630	SM00260	Two component signalling adaptor domain
AOY38_RS14635	SM00448	cheY-homologous receiver domain
AOY38_RS14640	SM00448	cheY-homologous receiver domain
AOY38_RS14645	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AOY38_RS14665	SM00046	Diacylglycerol kinase catalytic domain (presumed)
AOY38_RS14665	SM00851	MGS-like domain
AOY38_RS14720	SM00382	ATPases associated with a variety of cellular activities
AOY38_RS14725	SM00382	ATPases associated with a variety of cellular activities
AOY38_RS14745	SM00360	RNA recognition motif
AOY38_RS14770	SM00849	Metallo-beta-lactamase superfamily
AOY38_RS14795	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AOY38_RS14795	SM00387	Histidine kinase-like ATPases
AOY38_RS14795	SM00388	His Kinase A (phosphoacceptor) domain
AOY38_RS14855	SM00836	DALR anticodon binding domain
AOY38_RS14855	SM01016	Arginyl tRNA synthetase N terminal dom
AOY38_RS14880	SM00028	Tetratricopeptide repeats
AOY38_RS14885	SM00382	ATPases associated with a variety of cellular activities
AOY38_RS14940	SM01001	AIR carboxylase
AOY38_RS14965	SM00962	SRP54-type protein, GTPase domain
AOY38_RS15005	SM00271	DnaJ molecular chaperone homology domain
AOY38_RS15040	SM00382	ATPases associated with a variety of cellular activities
AOY38_RS15040	SM00994	ClpX C4-type zinc finger
AOY38_RS15040	SM01086	C-terminal, D2-small domain, of ClpB protein
AOY38_RS15055	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AOY38_RS15060	SM01130	AOY38_RS15060
AOY38_RS15065	SM00849	Metallo-beta-lactamase superfamily
AOY38_RS15085	SM00861	Transketolase, pyrimidine binding domain
AOY38_RS15090	SM00116	Domain in cystathionine beta-synthase and other proteins.
AOY38_RS15110	SM00897	FIST N domain
AOY38_RS15110	SM01204	AOY38_RS15110
AOY38_RS15175	SM00567	E-Z type HEAT repeats
AOY38_RS15180	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AOY38_RS15210	SM00493	AOY38_RS15210
AOY38_RS15230	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AOY38_RS15230	SM00388	His Kinase A (phosphoacceptor) domain
AOY38_RS15255	SM00448	cheY-homologous receiver domain
AOY38_RS15255	SM00862	Transcriptional regulatory protein, C terminal
AOY38_RS15280	SM00930	AOY38_RS15280
AOY38_RS15295	SM00382	ATPases associated with a variety of cellular activities
AOY38_RS15315	SM00487	DEAD-like helicases superfamily
AOY38_RS15315	SM00490	helicase superfamily c-terminal domain
AOY38_RS15325	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AOY38_RS15325	SM00331	Sigma factor PP2C-like phosphatases
AOY38_RS15335	SM00838	Elongation factor G C-terminus
AOY38_RS15335	SM00889	Elongation factor G, domain IV
AOY38_RS15435	SM00255	Toll - interleukin 1 - resistance
AOY38_RS15530	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
AOY38_RS15595	SM00320	WD40 repeats
AOY38_RS15610	SM01001	AIR carboxylase
AOY38_RS15645	SM00100	Cyclic nucleotide-monophosphate binding domain
AOY38_RS15680	SM00554	Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.
AOY38_RS15715	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AOY38_RS15715	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AOY38_RS15715	SM00091	PAS domain
AOY38_RS15715	SM00387	Histidine kinase-like ATPases
AOY38_RS15715	SM00388	His Kinase A (phosphoacceptor) domain
AOY38_RS15730	SM00448	cheY-homologous receiver domain
AOY38_RS15730	SM00862	Transcriptional regulatory protein, C terminal
AOY38_RS15750	SM00052	Putative diguanylate phosphodiesterase
AOY38_RS15750	SM00448	cheY-homologous receiver domain
AOY38_RS15760	SM00382	ATPases associated with a variety of cellular activities
AOY38_RS15795	SM00028	Tetratricopeptide repeats
AOY38_RS15800	SM01192	AOY38_RS15800
AOY38_RS15800	SM01193	AOY38_RS15800
AOY38_RS15875	SM01247	AOY38_RS15875
AOY38_RS15880	SM01248	AOY38_RS15880
AOY38_RS15925	SM00382	ATPases associated with a variety of cellular activities
AOY38_RS15965	SM00267	diguanylate cyclase
AOY38_RS15990	SM00732	Likely ribonuclease with RNase H fold.
AOY38_RS16035	SM00421	helix_turn_helix, Lux Regulon
AOY38_RS16050	SM00670	Large family of predicted nucleotide-binding domains
AOY38_RS16090	SM00100	Cyclic nucleotide-monophosphate binding domain
AOY38_RS16090	SM00419	helix_turn_helix, cAMP Regulatory protein
AOY38_RS16130	SM00487	DEAD-like helicases superfamily
AOY38_RS16130	SM00490	helicase superfamily c-terminal domain
AOY38_RS16130	SM01142	AOY38_RS16130
AOY38_RS16140	SM00465	GIY-YIG type nucleases (URI domain)
AOY38_RS16215	SM00387	Histidine kinase-like ATPases
AOY38_RS16230	SM00287	Bacterial SH3 domain homologues
AOY38_RS16240	SM00937	AOY38_RS16240
AOY38_RS16270	SM00450	Rhodanese Homology Domain
AOY38_RS16315	SM00829	Enoylreductase
AOY38_RS16365	SM00382	ATPases associated with a variety of cellular activities
AOY38_RS16400	SM00100	Cyclic nucleotide-monophosphate binding domain
AOY38_RS16405	SM00382	ATPases associated with a variety of cellular activities
AOY38_RS16425	SM00798	AICARFT/IMPCHase bienzyme
AOY38_RS16425	SM00851	MGS-like domain
AOY38_RS16445	SM00220	Serine/Threonine protein kinases, catalytic domain
AOY38_RS16470	SM00306	Hint (Hedgehog/Intein) domain N-terminal region
AOY38_RS16470	SM00481	DNA polymerase alpha chain like domain
AOY38_RS16475	SM00838	Elongation factor G C-terminus
AOY38_RS16490	SM00100	Cyclic nucleotide-monophosphate binding domain
AOY38_RS16500	SM00833	Cobalamin synthesis protein cobW C-terminal domain
