locus-tag class description SYN_RS00005 PF17762 HTH domain found in ParB protein SYN_RS00005 PF02195 ParB-like nuclease domain SYN_RS00010 PF11638 DnaA N-terminal domain SYN_RS00010 PF08299 Bacterial dnaA protein helix-turn-helix SYN_RS00010 PF00308 Bacterial dnaA protein SYN_RS00015 PF02767 DNA polymerase III beta subunit, central domain SYN_RS00015 PF00712 DNA polymerase III beta subunit, N-terminal domain SYN_RS00015 PF02768 DNA polymerase III beta subunit, C-terminal domain SYN_RS00020 PF00204 DNA gyrase B SYN_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus SYN_RS00020 PF18053 DNA gyrase B subunit insert domain SYN_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SYN_RS00020 PF01751 Toprim domain SYN_RS00025 PF00521 DNA gyrase/topoisomerase IV, subunit A SYN_RS00025 PF03989 DNA gyrase C-terminal domain, beta-propeller SYN_RS00035 PF01139 tRNA-splicing ligase RtcB SYN_RS00050 PF08378 Nuclease-related domain SYN_RS00055 PF01555 DNA methylase SYN_RS00075 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SYN_RS00085 PF04542 Sigma-70 region 2 SYN_RS00085 PF08281 Sigma-70, region 4 SYN_RS00110 PF00549 CoA-ligase SYN_RS00110 PF08442 ATP-grasp domain SYN_RS00135 PF00350 Dynamin family SYN_RS00145 PF00270 DEAD/DEAH box helicase SYN_RS00145 PF13749 Putative ATP-dependent DNA helicase recG C-terminal SYN_RS00145 PF17191 RecG wedge domain SYN_RS00190 PF15723 Motility quorum-sensing regulator, toxin of MqsA SYN_RS00195 PF00271 Helicase conserved C-terminal domain SYN_RS00195 PF00176 SNF2 family N-terminal domain SYN_RS00200 PF00313 'Cold-shock' DNA-binding domain SYN_RS00210 PF00465 Iron-containing alcohol dehydrogenase SYN_RS00215 PF02687 FtsX-like permease family SYN_RS00215 PF12704 MacB-like periplasmic core domain SYN_RS00215 PF00005 ABC transporter SYN_RS00220 PF02687 FtsX-like permease family SYN_RS00220 PF12704 MacB-like periplasmic core domain SYN_RS00220 PF00005 ABC transporter SYN_RS00225 PF00005 ABC transporter SYN_RS00230 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SYN_RS00235 PF00226 DnaJ domain SYN_RS00235 PF01556 DnaJ C terminal domain SYN_RS00235 PF00684 DnaJ central domain SYN_RS00240 PF00118 TCP-1/cpn60 chaperonin family SYN_RS00245 PF00166 Chaperonin 10 Kd subunit SYN_RS00250 PF00011 Hsp20/alpha crystallin family SYN_RS00255 PF00011 Hsp20/alpha crystallin family SYN_RS00275 PF01584 CheW-like domain SYN_RS00275 PF00072 Response regulator receiver domain SYN_RS00275 PF01627 Hpt domain SYN_RS00275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SYN_RS00285 PF13439 Glycosyltransferase Family 4 SYN_RS00285 PF00534 Glycosyl transferases group 1 SYN_RS00295 PF01435 Peptidase family M48 SYN_RS00295 PF16491 CAAX prenyl protease N-terminal, five membrane helices SYN_RS00305 PF00271 Helicase conserved C-terminal domain SYN_RS00305 PF00270 DEAD/DEAH box helicase SYN_RS00315 PF02219 Methylenetetrahydrofolate reductase SYN_RS00315 PF02574 Homocysteine S-methyltransferase SYN_RS00330 PF00072 Response regulator receiver domain SYN_RS00345 PF01678 Diaminopimelate epimerase SYN_RS00350 PF00155 Aminotransferase class I and II SYN_RS00355 PF01926 50S ribosome-binding GTPase SYN_RS00355 PF06071 Protein of unknown function (DUF933) SYN_RS00360 PF00753 Metallo-beta-lactamase superfamily SYN_RS00360 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain SYN_RS00360 PF10996 Beta-Casp domain SYN_RS00370 PF14437 MafB19-like deaminase SYN_RS00385 PF12169 DNA polymerase III subunits gamma and tau domain III SYN_RS00390 PF02575 YbaB/EbfC DNA-binding family SYN_RS00395 PF13662 Toprim domain SYN_RS00395 PF02132 RecR protein SYN_RS00405 PF05683 Fumarase C-terminus SYN_RS00405 PF05681 Fumarate hydratase (Fumerase) SYN_RS00410 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase SYN_RS00415 PF00037 4Fe-4S binding domain SYN_RS00420 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II SYN_RS00420 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg SYN_RS00425 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SYN_RS00435 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit SYN_RS00435 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region SYN_RS00435 PF00037 4Fe-4S binding domain SYN_RS00440 PF13237 4Fe-4S dicluster domain SYN_RS00450 PF01578 Cytochrome C assembly protein SYN_RS00455 PF05140 ResB-like family SYN_RS00470 PF00581 Rhodanese-like domain SYN_RS00480 PF00581 Rhodanese-like domain SYN_RS00490 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 SYN_RS00490 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain SYN_RS00510 PF01435 Peptidase family M48 SYN_RS00515 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg SYN_RS00515 PF10371 Domain of unknown function SYN_RS00515 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SYN_RS00515 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II SYN_RS00515 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase SYN_RS00535 PF02421 Ferrous iron transport protein B SYN_RS00535 PF04023 FeoA domain SYN_RS00535 PF07664 Ferrous iron transport protein B C terminus SYN_RS00535 PF07670 Nucleoside recognition SYN_RS00535 PF17910 FeoB cytosolic helical domain SYN_RS00545 PF00909 Ammonium Transporter Family SYN_RS00550 PF00543 Nitrogen regulatory protein P-II SYN_RS00555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SYN_RS00555 PF00512 His Kinase A (phospho-acceptor) domain SYN_RS00555 PF08448 PAS fold SYN_RS00555 PF13188 PAS domain SYN_RS00555 PF00072 Response regulator receiver domain SYN_RS00560 PF02954 Bacterial regulatory protein, Fis family SYN_RS00560 PF00158 Sigma-54 interaction domain SYN_RS00560 PF00072 Response regulator receiver domain SYN_RS00565 PF00512 His Kinase A (phospho-acceptor) domain SYN_RS00565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SYN_RS00575 PF00690 Cation transporter/ATPase, N-terminus SYN_RS00575 PF00689 Cation transporting ATPase, C-terminus SYN_RS00590 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B SYN_RS00590 PF00175 Oxidoreductase NAD-binding domain SYN_RS00595 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit SYN_RS00600 PF00374 Nickel-dependent hydrogenase SYN_RS00610 PF00005 ABC transporter SYN_RS00615 PF00528 Binding-protein-dependent transport system inner membrane component SYN_RS00620 PF00528 Binding-protein-dependent transport system inner membrane component SYN_RS00625 PF12849 PBP superfamily domain SYN_RS00635 PF10143 2,3-bisphosphoglycerate-independent phosphoglycerate mutase SYN_RS00635 PF01676 Metalloenzyme superfamily SYN_RS00660 PF01494 FAD binding domain SYN_RS00665 PF13187 4Fe-4S dicluster domain SYN_RS00665 PF04060 Putative Fe-S cluster SYN_RS00670 PF00384 Molybdopterin oxidoreductase SYN_RS00670 PF01568 Molydopterin dinucleotide binding domain SYN_RS00670 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SYN_RS00675 PF01568 Molydopterin dinucleotide binding domain SYN_RS00675 PF12838 4Fe-4S dicluster domain SYN_RS00675 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SYN_RS00675 PF00384 Molybdopterin oxidoreductase SYN_RS00675 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region SYN_RS00680 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region SYN_RS00680 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit SYN_RS00680 PF10531 SLBB domain SYN_RS00690 PF09163 Formate dehydrogenase N, transmembrane SYN_RS00690 PF13247 4Fe-4S dicluster domain SYN_RS00695 PF00384 Molybdopterin oxidoreductase SYN_RS00695 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SYN_RS00695 PF01568 Molydopterin dinucleotide binding domain SYN_RS00700 PF01568 Molydopterin dinucleotide binding domain SYN_RS00700 PF00384 Molybdopterin oxidoreductase SYN_RS00700 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SYN_RS00715 PF04055 Radical SAM superfamily SYN_RS00715 PF06463 Molybdenum Cofactor Synthesis C SYN_RS00750 PF00696 Amino acid kinase family SYN_RS00765 PF08402 TOBE domain SYN_RS00765 PF00005 ABC transporter SYN_RS00770 PF00528 Binding-protein-dependent transport system inner membrane component SYN_RS00775 PF12849 PBP superfamily domain SYN_RS00780 PF12849 PBP superfamily domain SYN_RS00820 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain SYN_RS00820 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase SYN_RS00830 PF13188 PAS domain SYN_RS00830 PF00989 PAS fold SYN_RS00830 PF13426 PAS domain SYN_RS00830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SYN_RS00830 PF00512 His Kinase A (phospho-acceptor) domain SYN_RS00835 PF03588 Leucyl/phenylalanyl-tRNA protein transferase SYN_RS00840 PF10431 C-terminal, D2-small domain, of ClpB protein SYN_RS00840 PF17871 AAA lid domain SYN_RS00840 PF07724 AAA domain (Cdc48 subfamily) SYN_RS00840 PF00004 ATPase family associated with various cellular activities (AAA) SYN_RS00840 PF02861 Clp amino terminal domain, pathogenicity island component SYN_RS00845 PF02617 ATP-dependent Clp protease adaptor protein ClpS SYN_RS00850 PF01649 Ribosomal protein S20 SYN_RS00860 PF00133 tRNA synthetases class I (I, L, M and V) SYN_RS00860 PF13603 Leucyl-tRNA synthetase, Domain 2 SYN_RS00860 PF09334 tRNA synthetases class I (M) SYN_RS00860 PF08264 Anticodon-binding domain of tRNA SYN_RS00865 PF01029 NusB family SYN_RS00870 PF00885 6,7-dimethyl-8-ribityllumazine synthase SYN_RS00875 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase SYN_RS00875 PF00925 GTP cyclohydrolase II SYN_RS00880 PF00677 Lumazine binding domain SYN_RS00885 PF03477 ATP cone domain SYN_RS00895 PF00464 Serine hydroxymethyltransferase SYN_RS00900 PF02502 Ribose/Galactose Isomerase SYN_RS00905 PF00109 Beta-ketoacyl synthase, N-terminal domain SYN_RS00905 PF02801 Beta-ketoacyl synthase, C-terminal domain SYN_RS00910 PF00550 Phosphopantetheine attachment site SYN_RS00915 PF01783 Ribosomal L32p protein family SYN_RS00925 PF00749 tRNA synthetases class I (E and Q), catalytic domain SYN_RS00940 PF03061 Thioesterase superfamily SYN_RS00950 PF05736 OprF membrane domain SYN_RS00950 PF00691 OmpA family SYN_RS00960 PF00202 Aminotransferase class-III SYN_RS00970 PF00550 Phosphopantetheine attachment site SYN_RS00975 PF00881 Nitroreductase family SYN_RS00980 PF02801 Beta-ketoacyl synthase, C-terminal domain SYN_RS00980 PF00109 Beta-ketoacyl synthase, N-terminal domain SYN_RS00990 PF00155 Aminotransferase class I and II SYN_RS01000 PF03707 Bacterial signalling protein N terminal repeat SYN_RS01000 PF00563 EAL domain SYN_RS01000 PF00990 Diguanylate cyclase, GGDEF domain SYN_RS01010 PF00004 ATPase family associated with various cellular activities (AAA) SYN_RS01010 PF02190 ATP-dependent protease La (LON) substrate-binding domain SYN_RS01010 PF05362 Lon protease (S16) C-terminal proteolytic domain SYN_RS01030 PF00072 Response regulator receiver domain SYN_RS01030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SYN_RS01030 PF00512 His Kinase A (phospho-acceptor) domain SYN_RS01030 PF08448 PAS fold SYN_RS01030 PF13188 PAS domain SYN_RS01040 PF00809 Pterin binding enzyme SYN_RS01045 PF00893 Small Multidrug Resistance protein SYN_RS01065 PF11700 Vacuole effluxer Atg22 like SYN_RS01070 PF00270 DEAD/DEAH box helicase SYN_RS01070 PF09382 RQC domain SYN_RS01070 PF16124 RecQ zinc-binding SYN_RS01070 PF00570 HRDC domain SYN_RS01070 PF00271 Helicase conserved C-terminal domain SYN_RS01075 PF00158 Sigma-54 interaction domain SYN_RS01075 PF02954 Bacterial regulatory protein, Fis family SYN_RS01075 PF13426 PAS domain SYN_RS01080 PF02770 Acyl-CoA dehydrogenase, middle domain SYN_RS01080 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SYN_RS01080 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SYN_RS01085 PF02770 Acyl-CoA dehydrogenase, middle domain SYN_RS01085 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SYN_RS01085 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SYN_RS01090 PF00072 Response regulator receiver domain SYN_RS01090 PF00196 Bacterial regulatory proteins, luxR family SYN_RS01105 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SYN_RS01105 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain SYN_RS01105 PF02142 MGS-like domain SYN_RS01110 PF00375 Sodium:dicarboxylate symporter family SYN_RS01120 PF01497 Periplasmic binding protein SYN_RS01125 PF00593 TonB dependent receptor SYN_RS01125 PF07715 TonB-dependent Receptor Plug Domain SYN_RS01130 PF00005 ABC transporter SYN_RS01135 PF01032 FecCD transport family SYN_RS01160 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit SYN_RS01170 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit SYN_RS01175 PF01610 Transposase SYN_RS01175 PF13542 Helix-turn-helix domain of transposase family ISL3 SYN_RS01175 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 SYN_RS01185 PF00313 'Cold-shock' DNA-binding domain SYN_RS01190 PF00072 Response regulator receiver domain SYN_RS01190 PF13188 PAS domain SYN_RS01190 PF08448 PAS fold SYN_RS01190 PF00512 His Kinase A (phospho-acceptor) domain SYN_RS01190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SYN_RS01195 PF07992 Pyridine nucleotide-disulphide oxidoreductase SYN_RS01200 PF01790 Prolipoprotein diacylglyceryl transferase SYN_RS01205 PF07992 Pyridine nucleotide-disulphide oxidoreductase SYN_RS01205 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SYN_RS01220 PF00588 SpoU rRNA Methylase family SYN_RS01220 PF08032 RNA 2'-O ribose methyltransferase substrate binding SYN_RS01225 PF03091 CutA1 divalent ion tolerance protein SYN_RS01230 PF02779 Transketolase, pyrimidine binding domain SYN_RS01230 PF02780 Transketolase, C-terminal domain SYN_RS01230 PF00456 Transketolase, thiamine diphosphate binding domain SYN_RS01235 PF03190 Protein of unknown function, DUF255 SYN_RS01250 PF03853 YjeF-related protein N-terminus SYN_RS01250 PF01256 Carbohydrate kinase SYN_RS01255 PF00348 Polyprenyl synthetase SYN_RS01260 PF01641 SelR domain SYN_RS01260 PF01625 Peptide methionine sulfoxide reductase SYN_RS01265 PF02405 Permease MlaE SYN_RS01285 PF04333 MlaA lipoprotein SYN_RS01300 PF00107 Zinc-binding dehydrogenase SYN_RS01300 PF08240 Alcohol dehydrogenase GroES-like domain SYN_RS01315 PF04055 Radical SAM superfamily SYN_RS01315 PF00919 Uncharacterized protein family UPF0004 SYN_RS01315 PF18693 TRAM domain SYN_RS01320 PF09397 Ftsk gamma domain SYN_RS01320 PF13491 4TM region of DNA translocase FtsK/SpoIIIE SYN_RS01320 PF17854 FtsK alpha domain SYN_RS01320 PF01580 FtsK/SpoIIIE family SYN_RS01335 PF03755 YicC-like family, N-terminal region SYN_RS01335 PF08340 Domain of unknown function (DUF1732) SYN_RS01340 PF00625 Guanylate kinase SYN_RS01345 PF01192 RNA polymerase Rpb6 SYN_RS01350 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family SYN_RS01355 PF00588 SpoU rRNA Methylase family SYN_RS01355 PF08032 RNA 2'-O ribose methyltransferase substrate binding SYN_RS01360 PF00482 Type II secretion system (T2SS), protein F SYN_RS01375 PF09190 DALR domain SYN_RS01375 PF01406 tRNA synthetases class I (C) catalytic domain SYN_RS01380 PF01875 Memo-like protein SYN_RS01385 PF01871 AMMECR1 SYN_RS01420 PF02357 Transcription termination factor nusG SYN_RS01420 PF00467 KOW motif SYN_RS01425 PF03946 Ribosomal protein L11, N-terminal domain SYN_RS01425 PF00298 Ribosomal protein L11, RNA binding domain SYN_RS01430 PF00687 Ribosomal protein L1p/L10e family SYN_RS01435 PF00466 Ribosomal protein L10 SYN_RS01440 PF00542 Ribosomal protein L7/L12 C-terminal domain SYN_RS01440 PF16320 Ribosomal protein L7/L12 dimerisation domain SYN_RS01445 PF04565 RNA polymerase Rpb2, domain 3 SYN_RS01445 PF04561 RNA polymerase Rpb2, domain 2 SYN_RS01445 PF04563 RNA polymerase beta subunit SYN_RS01445 PF00562 RNA polymerase Rpb2, domain 6 SYN_RS01445 PF04560 RNA polymerase Rpb2, domain 7 SYN_RS01445 PF10385 RNA polymerase beta subunit external 1 domain SYN_RS01450 PF04998 RNA polymerase Rpb1, domain 5 SYN_RS01450 PF05000 RNA polymerase Rpb1, domain 4 SYN_RS01450 PF00623 RNA polymerase Rpb1, domain 2 SYN_RS01450 PF04997 RNA polymerase Rpb1, domain 1 SYN_RS01450 PF04983 RNA polymerase Rpb1, domain 3 SYN_RS01455 PF00177 Ribosomal protein S7p/S5e SYN_RS01460 PF03143 Elongation factor Tu C-terminal domain SYN_RS01460 PF03144 Elongation factor Tu domain 2 SYN_RS01460 PF00009 Elongation factor Tu GTP binding domain SYN_RS01465 PF00338 Ribosomal protein S10p/S20e SYN_RS01470 PF00297 Ribosomal protein L3 SYN_RS01475 PF00573 Ribosomal protein L4/L1 family SYN_RS01480 PF00276 Ribosomal protein L23 SYN_RS01485 PF03947 Ribosomal Proteins L2, C-terminal domain SYN_RS01485 PF00181 Ribosomal Proteins L2, RNA binding domain SYN_RS01490 PF00203 Ribosomal protein S19 SYN_RS01495 PF00237 Ribosomal protein L22p/L17e SYN_RS01500 PF00189 Ribosomal protein S3, C-terminal domain SYN_RS01500 PF07650 KH domain SYN_RS01505 PF00252 Ribosomal protein L16p/L10e SYN_RS01510 PF00831 Ribosomal L29 protein SYN_RS01515 PF00366 Ribosomal protein S17 SYN_RS01520 PF00238 Ribosomal protein L14p/L23e SYN_RS01525 PF00467 KOW motif SYN_RS01525 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 SYN_RS01530 PF00673 ribosomal L5P family C-terminus SYN_RS01530 PF00281 Ribosomal protein L5 SYN_RS01535 PF00410 Ribosomal protein S8 SYN_RS01540 PF00347 Ribosomal protein L6 SYN_RS01545 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast SYN_RS01550 PF00333 Ribosomal protein S5, N-terminal domain SYN_RS01550 PF03719 Ribosomal protein S5, C-terminal domain SYN_RS01555 PF00327 Ribosomal protein L30p/L7e SYN_RS01560 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A SYN_RS01565 PF00344 SecY translocase SYN_RS01570 PF00557 Metallopeptidase family M24 SYN_RS01575 PF01176 Translation initiation factor 1A / IF-1 SYN_RS01580 PF00416 Ribosomal protein S13/S18 SYN_RS01585 PF00411 Ribosomal protein S11 SYN_RS01590 PF00163 Ribosomal protein S4/S9 N-terminal domain SYN_RS01590 PF01479 S4 domain SYN_RS01595 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain SYN_RS01595 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain SYN_RS01595 PF01000 RNA polymerase Rpb3/RpoA insert domain SYN_RS01600 PF01196 Ribosomal protein L17 SYN_RS01610 PF12706 Beta-lactamase superfamily domain SYN_RS01615 PF02875 Mur ligase family, glutamate ligase domain SYN_RS01615 PF08245 Mur ligase middle domain SYN_RS01620 PF04453 LPS transport system D SYN_RS01620 PF03968 OstA-like protein SYN_RS01625 PF00572 Ribosomal protein L13 SYN_RS01630 PF00380 Ribosomal protein S9/S16 SYN_RS01635 PF02774 Semialdehyde dehydrogenase, dimerisation domain SYN_RS01635 PF01118 Semialdehyde dehydrogenase, NAD binding domain SYN_RS01640 PF01406 tRNA synthetases class I (C) catalytic domain SYN_RS01640 PF09190 DALR domain SYN_RS01650 PF01411 tRNA synthetases class II (A) SYN_RS01650 PF02272 DHHA1 domain SYN_RS01650 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SYN_RS01655 PF02631 RecX family SYN_RS01660 PF00154 recA bacterial DNA recombination protein SYN_RS01665 PF02834 LigT like Phosphoesterase SYN_RS01670 PF18146 Damage-inducible protein CinA KH domain SYN_RS01670 PF02464 Competence-damaged protein SYN_RS01670 PF00994 Probable molybdopterin binding domain SYN_RS01685 PF00301 Rubredoxin SYN_RS01685 PF00258 Flavodoxin SYN_RS01685 PF00753 Metallo-beta-lactamase superfamily SYN_RS01705 PF03358 NADPH-dependent FMN reductase SYN_RS01710 PF09335 SNARE associated Golgi protein SYN_RS01720 PF00390 Malic enzyme, N-terminal domain SYN_RS01720 PF03949 Malic enzyme, NAD binding domain SYN_RS01735 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain SYN_RS01735 PF02769 AIR synthase related protein, C-terminal domain SYN_RS01735 PF00586 AIR synthase related protein, N-terminal domain SYN_RS01750 PF11871 Domain of unknown function (DUF3391) SYN_RS01750 PF01966 HD domain SYN_RS01755 PF00149 Calcineurin-like phosphoesterase SYN_RS01760 PF17820 PDZ domain SYN_RS01760 PF13180 PDZ domain SYN_RS01775 PF08240 Alcohol dehydrogenase GroES-like domain SYN_RS01780 PF16123 Hydroxyacylglutathione hydrolase C-terminus SYN_RS01780 PF00753 Metallo-beta-lactamase superfamily SYN_RS01785 PF00011 Hsp20/alpha crystallin family SYN_RS01790 PF13654 AAA domain SYN_RS01790 PF05362 Lon protease (S16) C-terminal proteolytic domain SYN_RS01820 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III SYN_RS01820 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal SYN_RS01830 PF00491 Arginase family SYN_RS01835 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SYN_RS01835 PF02770 Acyl-CoA dehydrogenase, middle domain SYN_RS01835 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SYN_RS01840 PF00501 AMP-binding enzyme SYN_RS01840 PF13193 AMP-binding enzyme C-terminal domain SYN_RS01855 PF00534 Glycosyl transferases group 1 SYN_RS01855 PF13439 Glycosyltransferase Family 4 SYN_RS01860 PF00534 Glycosyl transferases group 1 SYN_RS01860 PF13477 Glycosyl transferase 4-like SYN_RS01880 PF00132 Bacterial transferase hexapeptide (six repeats) SYN_RS01905 PF01370 NAD dependent epimerase/dehydratase family SYN_RS01910 PF00483 Nucleotidyl transferase SYN_RS01915 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family SYN_RS01930 PF01370 NAD dependent epimerase/dehydratase family SYN_RS01935 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain SYN_RS01935 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain SYN_RS01935 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain SYN_RS01975 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain SYN_RS01975 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain SYN_RS01975 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain SYN_RS01980 PF01370 NAD dependent epimerase/dehydratase family SYN_RS01985 PF03062 MBOAT, membrane-bound O-acyltransferase family SYN_RS02005 PF00535 Glycosyl transferase family 2 SYN_RS02040 PF00534 Glycosyl transferases group 1 SYN_RS02040 PF13439 Glycosyltransferase Family 4 SYN_RS02065 PF00953 Glycosyl transferase family 4 SYN_RS02075 PF02563 Polysaccharide biosynthesis/export protein SYN_RS02075 PF18412 Outer-membrane lipoprotein Wza C-terminal domain SYN_RS02075 PF10531 SLBB domain SYN_RS02085 PF13614 AAA domain SYN_RS02090 PF02885 Glycosyl transferase family, helical bundle domain SYN_RS02090 PF00591 Glycosyl transferase family, a/b domain SYN_RS02095 PF00218 Indole-3-glycerol phosphate synthase SYN_RS02100 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase SYN_RS02115 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain SYN_RS02115 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain SYN_RS02125 PF01144 Coenzyme A transferase SYN_RS02135 PF00580 UvrD/REP helicase N-terminal domain SYN_RS02135 PF13361 UvrD-like helicase C-terminal domain SYN_RS02150 PF02938 GAD domain SYN_RS02150 PF00152 tRNA synthetases class II (D, K and N) SYN_RS02150 PF01336 OB-fold nucleic acid binding domain SYN_RS02155 PF01425 Amidase SYN_RS02160 PF02934 GatB/GatE catalytic domain SYN_RS02160 PF02637 GatB domain SYN_RS02170 PF00583 Acetyltransferase (GNAT) family SYN_RS02170 PF13380 CoA binding domain SYN_RS02170 PF13607 Succinyl-CoA ligase like flavodoxin domain SYN_RS02180 PF13607 Succinyl-CoA ligase like flavodoxin domain SYN_RS02180 PF13380 CoA binding domain SYN_RS02200 PF03063 Prismane/CO dehydrogenase family SYN_RS02210 PF00027 Cyclic nucleotide-binding domain SYN_RS02210 PF00325 Bacterial regulatory proteins, crp family SYN_RS02220 PF00535 Glycosyl transferase family 2 SYN_RS02235 PF01941 S-adenosylmethionine synthetase (AdoMet synthetase) SYN_RS02260 PF16901 C-terminal domain of alpha-glycerophosphate oxidase SYN_RS02260 PF01266 FAD dependent oxidoreductase SYN_RS02265 PF02754 Cysteine-rich domain SYN_RS02265 PF13183 4Fe-4S dicluster domain SYN_RS02275 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 SYN_RS02275 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain SYN_RS02295 PF00156 Phosphoribosyl transferase domain SYN_RS02315 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain SYN_RS02315 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain SYN_RS02320 PF07228 Stage II sporulation protein E (SpoIIE) SYN_RS02320 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain SYN_RS02330 PF13581 Histidine kinase-like ATPase domain SYN_RS02335 PF01740 STAS domain SYN_RS02345 PF01569 PAP2 superfamily SYN_RS02405 PF13091 PLD-like domain SYN_RS02405 PF13396 Phospholipase_D-nuclease N-terminal SYN_RS02425 PF13542 Helix-turn-helix domain of transposase family ISL3 SYN_RS02425 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 SYN_RS02425 PF01610 Transposase SYN_RS02590 PF06074 Protein of unknown function (DUF935) SYN_RS02600 PF05069 Phage virion morphogenesis family SYN_RS02615 PF10124 Mu-like prophage major head subunit gpT SYN_RS02710 PF06271 RDD family SYN_RS02715 PF04452 RNA methyltransferase SYN_RS02725 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SYN_RS02725 PF14824 Sirohaem biosynthesis protein central SYN_RS02725 PF10414 Sirohaem synthase dimerisation region SYN_RS02730 PF01578 Cytochrome C assembly protein SYN_RS02735 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain SYN_RS02735 PF01488 Shikimate / quinate 5-dehydrogenase SYN_RS02735 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain SYN_RS02740 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain SYN_RS02740 PF03900 Porphobilinogen deaminase, C-terminal domain SYN_RS02745 PF02602 Uroporphyrinogen-III synthase HemD SYN_RS02745 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SYN_RS02755 PF01699 Sodium/calcium exchanger protein SYN_RS02765 PF04055 Radical SAM superfamily SYN_RS02765 PF13186 Iron-sulfur cluster-binding domain SYN_RS02770 PF00490 Delta-aminolevulinic acid dehydratase SYN_RS02775 PF04055 Radical SAM superfamily SYN_RS02775 PF13186 Iron-sulfur cluster-binding domain SYN_RS02780 PF13404 AsnC-type helix-turn-helix domain SYN_RS02780 PF17805 AsnC-like ligand binding domain SYN_RS02785 PF00149 Calcineurin-like phosphoesterase SYN_RS02785 PF02872 5'-nucleotidase, C-terminal domain SYN_RS02795 PF01367 5'-3' exonuclease, C-terminal SAM fold SYN_RS02795 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain SYN_RS02795 PF00476 DNA polymerase family A SYN_RS02795 PF01612 3'-5' exonuclease SYN_RS02800 PF00768 D-alanyl-D-alanine carboxypeptidase SYN_RS02800 PF07943 Penicillin-binding protein 5, C-terminal domain SYN_RS02810 PF13188 PAS domain SYN_RS02810 PF00072 Response regulator receiver domain SYN_RS02810 PF00512 His Kinase A (phospho-acceptor) domain SYN_RS02810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SYN_RS02810 PF08448 PAS fold SYN_RS02815 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SYN_RS02815 PF02806 Alpha amylase, C-terminal all-beta domain SYN_RS02815 PF00128 Alpha amylase, catalytic domain SYN_RS02820 PF00793 DAHP synthetase I family SYN_RS02895 PF09827 CRISPR associated protein Cas2 SYN_RS02905 PF13542 Helix-turn-helix domain of transposase family ISL3 SYN_RS02905 PF01610 Transposase SYN_RS02905 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 SYN_RS02925 PF01950 Fructose-1,6-bisphosphatase SYN_RS02930 PF09587 Bacterial capsule synthesis protein PGA_cap SYN_RS02940 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ SYN_RS02950 PF02899 Phage integrase, N-terminal SAM-like domain SYN_RS02950 PF00589 Phage integrase family SYN_RS02975 PF00905 Penicillin binding protein transpeptidase domain SYN_RS02980 PF01098 Cell cycle protein SYN_RS02985 PF00430 ATP synthase B/B' CF(0) SYN_RS02990 PF00430 ATP synthase B/B' CF(0) SYN_RS02995 PF00213 ATP synthase delta (OSCP) subunit SYN_RS03000 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SYN_RS03000 PF00306 ATP synthase alpha/beta chain, C terminal domain SYN_RS03000 PF02874 ATP synthase alpha/beta family, beta-barrel domain SYN_RS03005 PF00231 ATP synthase SYN_RS03010 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SYN_RS03010 PF02874 ATP synthase alpha/beta family, beta-barrel domain SYN_RS03015 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain SYN_RS03015 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain SYN_RS03020 PF03449 Transcription elongation factor, N-terminal SYN_RS03020 PF01272 Transcription elongation factor, GreA/GreB, C-term SYN_RS03060 PF04011 LemA family SYN_RS03065 PF00149 Calcineurin-like phosphoesterase SYN_RS03070 PF00571 CBS domain SYN_RS03070 PF12627 Probable RNA and SrmB- binding site of polymerase A SYN_RS03070 PF02272 DHHA1 domain SYN_RS03070 PF01743 Poly A polymerase head domain SYN_RS03070 PF01368 DHH family SYN_RS03075 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain SYN_RS03075 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain SYN_RS03075 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain SYN_RS03080 PF16363 GDP-mannose 4,6 dehydratase SYN_RS03085 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SYN_RS03105 PF01066 CDP-alcohol phosphatidyltransferase SYN_RS03115 PF02824 TGS domain SYN_RS03115 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SYN_RS03115 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SYN_RS03115 PF03129 Anticodon binding domain SYN_RS03120 PF00707 Translation initiation factor IF-3, C-terminal domain SYN_RS03120 PF05198 Translation initiation factor IF-3, N-terminal domain SYN_RS03125 PF01632 Ribosomal protein L35 SYN_RS03130 PF00453 Ribosomal protein L20 SYN_RS03135 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain SYN_RS03135 PF01409 tRNA synthetases class II core domain (F) SYN_RS03140 PF03483 B3/4 domain SYN_RS03140 PF03484 tRNA synthetase B5 domain SYN_RS03140 PF03147 Ferredoxin-fold anticodon binding domain SYN_RS03140 PF01588 Putative tRNA binding domain SYN_RS03140 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain SYN_RS03145 PF00216 Bacterial DNA-binding protein SYN_RS03150 PF13411 MerR HTH family regulatory protein SYN_RS03165 PF00381 PTS HPr component phosphorylation site SYN_RS03170 PF00391 PEP-utilising enzyme, mobile domain SYN_RS03170 PF05524 PEP-utilising enzyme, N-terminal SYN_RS03170 PF02896 PEP-utilising enzyme, TIM barrel domain SYN_RS03185 PF03952 Enolase, N-terminal domain SYN_RS03185 PF00113 Enolase, C-terminal TIM barrel domain SYN_RS03190 PF03652 Holliday junction resolvase SYN_RS03195 PF02618 YceG-like family SYN_RS03200 PF02381 MraZ protein, putative antitoxin-like SYN_RS03205 PF01795 MraW methylase family SYN_RS03210 PF04977 Septum formation initiator SYN_RS03215 PF00905 Penicillin binding protein transpeptidase domain SYN_RS03215 PF03793 PASTA domain SYN_RS03215 PF03717 Penicillin-binding Protein dimerisation domain SYN_RS03220 PF01225 Mur ligase family, catalytic domain SYN_RS03220 PF08245 Mur ligase middle domain SYN_RS03220 PF02875 Mur ligase family, glutamate ligase domain SYN_RS03225 PF08245 Mur ligase middle domain SYN_RS03225 PF02875 Mur ligase family, glutamate ligase domain SYN_RS03225 PF01225 Mur ligase family, catalytic domain SYN_RS03230 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 SYN_RS03230 PF00953 Glycosyl transferase family 4 SYN_RS03235 PF02875 Mur ligase family, glutamate ligase domain SYN_RS03235 PF08245 Mur ligase middle domain SYN_RS03240 PF01098 Cell cycle protein SYN_RS03245 PF04101 Glycosyltransferase family 28 C-terminal domain SYN_RS03245 PF03033 Glycosyltransferase family 28 N-terminal domain SYN_RS03250 PF08245 Mur ligase middle domain SYN_RS03250 PF02875 Mur ligase family, glutamate ligase domain SYN_RS03250 PF01225 Mur ligase family, catalytic domain SYN_RS03255 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain SYN_RS03255 PF01565 FAD binding domain SYN_RS03260 PF03799 Cell division protein FtsQ SYN_RS03260 PF08478 POTRA domain, FtsQ-type SYN_RS03265 PF02491 SHS2 domain inserted in FTSA SYN_RS03270 PF12327 FtsZ family, C-terminal domain SYN_RS03270 PF00091 Tubulin/FtsZ family, GTPase domain SYN_RS03285 PF01739 CheR methyltransferase, SAM binding domain SYN_RS03290 PF01584 CheW-like domain SYN_RS03300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SYN_RS03300 PF00072 Response regulator receiver domain SYN_RS03300 PF01584 CheW-like domain SYN_RS03300 PF01627 Hpt domain SYN_RS03305 PF01339 CheB methylesterase SYN_RS03305 PF00072 Response regulator receiver domain SYN_RS03310 PF03372 Endonuclease/Exonuclease/phosphatase family SYN_RS03320 PF07690 Major Facilitator Superfamily SYN_RS03325 PF08148 DSHCT (NUC185) domain SYN_RS03325 PF00271 Helicase conserved C-terminal domain SYN_RS03325 PF00270 DEAD/DEAH box helicase SYN_RS03335 PF13193 AMP-binding enzyme C-terminal domain SYN_RS03335 PF00501 AMP-binding enzyme SYN_RS03350 PF01161 Phosphatidylethanolamine-binding protein SYN_RS03365 PF12826 Helix-hairpin-helix motif SYN_RS03365 PF02151 UvrB/uvrC motif SYN_RS03365 PF08459 UvrC Helix-hairpin-helix N-terminal SYN_RS03365 PF01541 GIY-YIG catalytic domain SYN_RS03370 PF01169 Uncharacterized protein family UPF0016 SYN_RS03375 PF01472 PUA domain SYN_RS03375 PF00696 Amino acid kinase family SYN_RS03380 PF01018 GTP1/OBG SYN_RS03380 PF01926 50S ribosome-binding GTPase SYN_RS03385 PF01016 Ribosomal L27 protein SYN_RS03390 PF00829 Ribosomal prokaryotic L21 protein SYN_RS03410 PF00156 Phosphoribosyl transferase domain SYN_RS03425 PF04324 BFD-like [2Fe-2S] binding domain SYN_RS03425 PF07992 Pyridine nucleotide-disulphide oxidoreductase SYN_RS03430 PF01266 FAD dependent oxidoreductase SYN_RS03435 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal SYN_RS03435 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal SYN_RS03440 PF01300 Telomere recombination SYN_RS03440 PF03481 Putative GTP-binding controlling metal-binding SYN_RS03445 PF00731 AIR carboxylase SYN_RS03450 PF01808 AICARFT/IMPCHase bienzyme SYN_RS03450 PF02142 MGS-like domain SYN_RS03455 PF02843 Phosphoribosylglycinamide synthetase, C domain SYN_RS03455 PF02844 Phosphoribosylglycinamide synthetase, N domain SYN_RS03455 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain SYN_RS03460 PF00132 Bacterial transferase hexapeptide (six repeats) SYN_RS03460 PF12804 MobA-like NTP transferase domain SYN_RS03465 PF01207 Dihydrouridine synthase (Dus) SYN_RS03475 PF05164 Cell division protein ZapA SYN_RS03480 PF00013 KH domain SYN_RS03480 PF01966 HD domain SYN_RS03480 PF12072 Domain of unknown function (DUF3552) SYN_RS03485 PF13277 YmdB-like protein SYN_RS03490 PF00579 tRNA synthetases class I (W and Y) SYN_RS03530 PF01709 Transcriptional regulator SYN_RS03535 PF02075 Crossover junction endodeoxyribonuclease RuvC SYN_RS03540 PF07499 RuvA, C-terminal domain SYN_RS03540 PF01330 RuvA N terminal domain SYN_RS03545 PF05496 Holliday junction DNA helicase RuvB P-loop domain SYN_RS03545 PF05491 RuvB C-terminal winged helix domain SYN_RS03545 PF17864 RuvB AAA lid domain SYN_RS03550 PF02677 Epoxyqueuosine reductase QueH SYN_RS03570 PF00391 PEP-utilising enzyme, mobile domain SYN_RS03570 PF02896 PEP-utilising enzyme, TIM barrel domain SYN_RS03570 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain SYN_RS03575 PF00137 ATP synthase subunit C SYN_RS03590 PF01933 Uncharacterised protein family UPF0052 SYN_RS03600 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SYN_RS03600 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SYN_RS03600 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SYN_RS03600 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SYN_RS03605 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase SYN_RS03620 PF01116 Fructose-bisphosphate aldolase class-II SYN_RS03625 PF00365 Phosphofructokinase SYN_RS03630 PF00391 PEP-utilising enzyme, mobile domain SYN_RS03630 PF00224 Pyruvate kinase, barrel domain SYN_RS03630 PF02887 Pyruvate kinase, alpha/beta domain SYN_RS03635 PF02685 Glucokinase SYN_RS03640 PF00342 Phosphoglucose isomerase SYN_RS03645 PF13533 Biotin-lipoyl like SYN_RS03650 PF00873 AcrB/AcrD/AcrF family SYN_RS03655 PF02321 Outer membrane efflux protein SYN_RS03660 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 SYN_RS03660 PF13542 Helix-turn-helix domain of transposase family ISL3 SYN_RS03660 PF01610 Transposase SYN_RS03670 PF01594 AI-2E family transporter SYN_RS03700 PF13476 AAA domain SYN_RS03705 PF00149 Calcineurin-like phosphoesterase SYN_RS03705 PF12320 Type 5 capsule protein repressor C-terminal domain SYN_RS03720 PF01321 Creatinase/Prolidase N-terminal domain SYN_RS03720 PF00557 Metallopeptidase family M24 SYN_RS03735 PF01862 Pyruvoyl-dependent arginine decarboxylase (PvlArgDC) SYN_RS03750 PF00196 Bacterial regulatory proteins, luxR family SYN_RS03750 PF00072 Response regulator receiver domain SYN_RS03755 PF04493 Endonuclease V SYN_RS03765 PF13607 Succinyl-CoA ligase like flavodoxin domain SYN_RS03765 PF13380 CoA binding domain SYN_RS03770 PF01687 Riboflavin kinase SYN_RS03770 PF06574 FAD synthetase SYN_RS03815 PF13193 AMP-binding enzyme C-terminal domain SYN_RS03815 PF00501 AMP-binding enzyme SYN_RS03820 PF13193 AMP-binding enzyme C-terminal domain SYN_RS03820 PF00501 AMP-binding enzyme SYN_RS03825 PF00158 Sigma-54 interaction domain SYN_RS03870 PF02463 RecF/RecN/SMC N terminal domain SYN_RS03875 PF13361 UvrD-like helicase C-terminal domain SYN_RS03875 PF00580 UvrD/REP helicase N-terminal domain SYN_RS03880 PF13195 Protein of unknown function (DUF4011) SYN_RS03880 PF13087 AAA domain SYN_RS03880 PF13086 AAA domain SYN_RS03915 PF00881 Nitroreductase family SYN_RS03920 PF03848 Tellurite resistance protein TehB SYN_RS03925 PF12724 Flavodoxin domain SYN_RS03935 PF00117 Glutamine amidotransferase class-I SYN_RS03935 PF06418 CTP synthase N-terminus SYN_RS03940 PF01380 SIS domain SYN_RS03955 PF01967 MoaC family SYN_RS03960 PF13335 Magnesium chelatase, subunit ChlI C-terminal SYN_RS03960 PF01078 Magnesium chelatase, subunit ChlI SYN_RS03980 PF00072 Response regulator receiver domain SYN_RS03980 PF00512 His Kinase A (phospho-acceptor) domain SYN_RS03980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SYN_RS03980 PF08448 PAS fold SYN_RS03980 PF13188 PAS domain SYN_RS03985 PF00534 Glycosyl transferases group 1 SYN_RS03985 PF13579 Glycosyl transferase 4-like domain SYN_RS03995 PF00343 Carbohydrate phosphorylase SYN_RS03995 PF11897 Protein of unknown function (DUF3417) SYN_RS04000 PF11146 Protein of unknown function (DUF2905) SYN_RS04020 PF12706 Beta-lactamase superfamily domain SYN_RS04035 PF00437 Type II/IV secretion system protein SYN_RS04040 PF00437 Type II/IV secretion system protein SYN_RS04080 PF03279 Bacterial lipid A biosynthesis acyltransferase SYN_RS04095 PF03966 Trm112p-like protein SYN_RS04105 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SYN_RS04115 PF12544 Lysine-2,3-aminomutase SYN_RS04115 PF04055 Radical SAM superfamily SYN_RS04120 PF01132 Elongation factor P (EF-P) OB domain SYN_RS04120 PF09285 Elongation factor P, C-terminal SYN_RS04120 PF08207 Elongation factor P (EF-P) KOW-like domain SYN_RS04125 PF00152 tRNA synthetases class II (D, K and N) SYN_RS04130 PF01618 MotA/TolQ/ExbB proton channel family SYN_RS04135 PF02472 Biopolymer transport protein ExbD/TolR SYN_RS04145 PF04052 TolB amino-terminal domain SYN_RS04145 PF07676 WD40-like Beta Propeller Repeat SYN_RS04150 PF00691 OmpA family SYN_RS04170 PF04748 Divergent polysaccharide deacetylase SYN_RS04175 PF03572 Peptidase family S41 SYN_RS04175 PF13180 PDZ domain SYN_RS04190 PF02646 RmuC family SYN_RS04200 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase SYN_RS04215 PF00690 Cation transporter/ATPase, N-terminus SYN_RS04215 PF00689 Cation transporting ATPase, C-terminus SYN_RS04220 PF00005 ABC transporter SYN_RS04220 PF17760 UvrA interaction domain SYN_RS04220 PF17755 UvrA DNA-binding domain SYN_RS04225 PF09312 SurA N-terminal domain SYN_RS04225 PF00639 PPIC-type PPIASE domain SYN_RS04230 PF00343 Carbohydrate phosphorylase SYN_RS04230 PF11897 Protein of unknown function (DUF3417) SYN_RS04235 PF00690 Cation transporter/ATPase, N-terminus SYN_RS04235 PF00689 Cation transporting ATPase, C-terminus SYN_RS04240 PF02559 CarD-like/TRCF domain SYN_RS04240 PF00270 DEAD/DEAH box helicase SYN_RS04240 PF00271 Helicase conserved C-terminal domain SYN_RS04240 PF17757 UvrB interaction domain SYN_RS04240 PF03461 TRCF domain SYN_RS04245 PF02445 Quinolinate synthetase A protein SYN_RS04270 PF13749 Putative ATP-dependent DNA helicase recG C-terminal SYN_RS04270 PF17191 RecG wedge domain SYN_RS04270 PF00270 DEAD/DEAH box helicase SYN_RS04350 PF03747 ADP-ribosylglycohydrolase SYN_RS04380 PF01381 Helix-turn-helix SYN_RS04385 PF07804 HipA-like C-terminal domain SYN_RS04385 PF13657 HipA N-terminal domain SYN_RS04415 PF13382 Adenine deaminase C-terminal domain SYN_RS04415 PF01979 Amidohydrolase family SYN_RS04430 PF13426 PAS domain SYN_RS04430 PF08448 PAS fold SYN_RS04430 PF08447 PAS fold SYN_RS04430 PF00990 Diguanylate cyclase, GGDEF domain SYN_RS04430 PF00563 EAL domain SYN_RS04430 PF05231 MASE1 SYN_RS04475 PF00989 PAS fold SYN_RS04475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SYN_RS04475 PF00672 HAMP domain SYN_RS04475 PF00512 His Kinase A (phospho-acceptor) domain SYN_RS04480 PF02954 Bacterial regulatory protein, Fis family SYN_RS04480 PF00072 Response regulator receiver domain SYN_RS04480 PF00158 Sigma-54 interaction domain SYN_RS04490 PF01556 DnaJ C terminal domain SYN_RS04490 PF00684 DnaJ central domain SYN_RS04490 PF00226 DnaJ domain SYN_RS04495 PF01259 SAICAR synthetase SYN_RS04500 PF00753 Metallo-beta-lactamase superfamily SYN_RS04505 PF01189 16S rRNA methyltransferase RsmB/F SYN_RS04505 PF01029 NusB family SYN_RS04510 PF02911 Formyl transferase, C-terminal domain SYN_RS04510 PF00551 Formyl transferase SYN_RS04515 PF03776 Septum formation topological specificity factor MinE SYN_RS04520 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain SYN_RS04525 PF05209 Septum formation inhibitor MinC, N-terminal domain SYN_RS04525 PF03775 Septum formation inhibitor MinC, C-terminal domain SYN_RS04535 PF01212 Beta-eliminating lyase SYN_RS04550 PF01914 MarC family integral membrane protein SYN_RS04555 PF00005 ABC transporter SYN_RS04560 PF00005 ABC transporter SYN_RS04565 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SYN_RS04580 PF08447 PAS fold SYN_RS04580 PF00989 PAS fold SYN_RS04580 PF00512 His Kinase A (phospho-acceptor) domain SYN_RS04580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SYN_RS04585 PF02954 Bacterial regulatory protein, Fis family SYN_RS04585 PF00072 Response regulator receiver domain SYN_RS04585 PF00158 Sigma-54 interaction domain SYN_RS04590 PF00460 Flagella basal body rod protein SYN_RS04595 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SYN_RS04595 PF00460 Flagella basal body rod protein SYN_RS04600 PF02049 Flagellar hook-basal body complex protein FliE SYN_RS04605 PF01514 Secretory protein of YscJ/FliF family SYN_RS04605 PF08345 Flagellar M-ring protein C-terminal SYN_RS04610 PF01706 FliG C-terminal domain SYN_RS04610 PF14842 FliG N-terminal domain SYN_RS04610 PF14841 FliG middle domain SYN_RS04615 PF02108 Flagellar assembly protein FliH SYN_RS04620 PF18269 T3SS EscN ATPase C-terminal domain SYN_RS04620 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SYN_RS04620 PF02874 ATP synthase alpha/beta family, beta-barrel domain SYN_RS04645 PF00140 Sigma-70 factor, region 1.2 SYN_RS04645 PF04542 Sigma-70 region 2 SYN_RS04645 PF04545 Sigma-70, region 4 SYN_RS04645 PF03979 Sigma-70 factor, region 1.1 SYN_RS04645 PF04539 Sigma-70 region 3 SYN_RS04650 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 SYN_RS04650 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) SYN_RS04655 PF00211 Adenylate and Guanylate cyclase catalytic domain SYN_RS04655 PF00072 Response regulator receiver domain SYN_RS04665 PF07478 D-ala D-ala ligase C-terminus SYN_RS04665 PF01820 D-ala D-ala ligase N-terminus SYN_RS04675 PF01820 D-ala D-ala ligase N-terminus SYN_RS04675 PF07478 D-ala D-ala ligase C-terminus SYN_RS04680 PF02405 Permease MlaE SYN_RS04685 PF00005 ABC transporter SYN_RS04745 PF00872 Transposase, Mutator family SYN_RS04790 PF11897 Protein of unknown function (DUF3417) SYN_RS04790 PF00343 Carbohydrate phosphorylase SYN_RS04810 PF00872 Transposase, Mutator family SYN_RS04815 PF00872 Transposase, Mutator family SYN_RS04820 PF00990 Diguanylate cyclase, GGDEF domain SYN_RS04820 PF00072 Response regulator receiver domain SYN_RS04835 PF06794 Uncharacterised protein family (UPF0270) SYN_RS04865 PF11798 IMS family HHH motif SYN_RS04865 PF00817 impB/mucB/samB family SYN_RS04865 PF11799 impB/mucB/samB family C-terminal domain SYN_RS04875 PF02586 SOS response associated peptidase (SRAP) SYN_RS04895 PF01384 Phosphate transporter family SYN_RS04910 PF01548 Transposase SYN_RS04910 PF02371 Transposase IS116/IS110/IS902 family SYN_RS04915 PF13407 Periplasmic binding protein domain SYN_RS04925 PF01541 GIY-YIG catalytic domain SYN_RS04930 PF11756 Nitrous oxide-stimulated promoter SYN_RS04950 PF01695 IstB-like ATP binding protein SYN_RS04960 PF00872 Transposase, Mutator family SYN_RS04965 PF17932 Tetracyclin repressor-like, C-terminal domain SYN_RS04965 PF00440 Bacterial regulatory proteins, tetR family SYN_RS04975 PF05736 OprF membrane domain SYN_RS04975 PF00691 OmpA family SYN_RS04985 PF13380 CoA binding domain SYN_RS04985 PF13607 Succinyl-CoA ligase like flavodoxin domain SYN_RS04995 PF08000 Bacterial PH domain SYN_RS05005 PF00749 tRNA synthetases class I (E and Q), catalytic domain SYN_RS05005 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain SYN_RS05015 PF00586 AIR synthase related protein, N-terminal domain SYN_RS05015 PF02769 AIR synthase related protein, C-terminal domain SYN_RS05025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SYN_RS05025 PF03466 LysR substrate binding domain SYN_RS05030 PF00291 Pyridoxal-phosphate dependent enzyme SYN_RS05030 PF14821 Threonine synthase N terminus SYN_RS05035 PF00301 Rubredoxin SYN_RS05035 PF01613 Flavin reductase like domain SYN_RS05040 PF04324 BFD-like [2Fe-2S] binding domain SYN_RS05040 PF01592 NifU-like N terminal domain SYN_RS05040 PF01106 NifU-like domain SYN_RS05045 PF00266 Aminotransferase class-V SYN_RS05055 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SYN_RS05055 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SYN_RS05055 PF02770 Acyl-CoA dehydrogenase, middle domain SYN_RS05065 PF02535 ZIP Zinc transporter SYN_RS05080 PF06968 Biotin and Thiamin Synthesis associated domain SYN_RS05080 PF04055 Radical SAM superfamily SYN_RS05085 PF06968 Biotin and Thiamin Synthesis associated domain SYN_RS05085 PF04055 Radical SAM superfamily SYN_RS05090 PF12838 4Fe-4S dicluster domain SYN_RS05090 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region SYN_RS05090 PF01568 Molydopterin dinucleotide binding domain SYN_RS05090 PF00384 Molybdopterin oxidoreductase SYN_RS05090 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SYN_RS05095 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SYN_RS05095 PF00384 Molybdopterin oxidoreductase SYN_RS05095 PF01568 Molydopterin dinucleotide binding domain SYN_RS05100 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit SYN_RS05100 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region SYN_RS05100 PF10531 SLBB domain SYN_RS05105 PF07690 Major Facilitator Superfamily SYN_RS05135 PF01520 N-acetylmuramoyl-L-alanine amidase SYN_RS05135 PF11741 AMIN domain SYN_RS05155 PF04343 Protein of unknown function, DUF488 SYN_RS05165 PF13188 PAS domain SYN_RS05165 PF00072 Response regulator receiver domain SYN_RS05165 PF08448 PAS fold SYN_RS05165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SYN_RS05165 PF00512 His Kinase A (phospho-acceptor) domain SYN_RS05170 PF00072 Response regulator receiver domain SYN_RS05170 PF00158 Sigma-54 interaction domain SYN_RS05175 PF12631 MnmE helical domain SYN_RS05175 PF01926 50S ribosome-binding GTPase SYN_RS05175 PF10396 GTP-binding protein TrmE N-terminus SYN_RS05180 PF00037 4Fe-4S binding domain SYN_RS05180 PF02256 Iron hydrogenase small subunit SYN_RS05180 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region SYN_RS05180 PF02906 Iron only hydrogenase large subunit, C-terminal domain SYN_RS05185 PF10531 SLBB domain SYN_RS05185 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region SYN_RS05185 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit SYN_RS05200 PF01862 Pyruvoyl-dependent arginine decarboxylase (PvlArgDC) SYN_RS05205 PF08447 PAS fold SYN_RS05205 PF00989 PAS fold SYN_RS05205 PF00512 His Kinase A (phospho-acceptor) domain SYN_RS05205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SYN_RS05210 PF00072 Response regulator receiver domain SYN_RS05210 PF00486 Transcriptional regulatory protein, C terminal SYN_RS05225 PF01050 Mannose-6-phosphate isomerase SYN_RS05225 PF00483 Nucleotidyl transferase SYN_RS05240 PF11798 IMS family HHH motif SYN_RS05240 PF00817 impB/mucB/samB family SYN_RS05240 PF11799 impB/mucB/samB family C-terminal domain SYN_RS05255 PF01370 NAD dependent epimerase/dehydratase family SYN_RS05260 PF00155 Aminotransferase class I and II SYN_RS05270 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 SYN_RS05270 PF01610 Transposase SYN_RS05270 PF13542 Helix-turn-helix domain of transposase family ISL3 SYN_RS05275 PF00512 His Kinase A (phospho-acceptor) domain SYN_RS05275 PF08448 PAS fold SYN_RS05275 PF00072 Response regulator receiver domain SYN_RS05275 PF13188 PAS domain SYN_RS05275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SYN_RS05285 PF00202 Aminotransferase class-III SYN_RS05290 PF01168 Alanine racemase, N-terminal domain SYN_RS05295 PF02545 Maf-like protein SYN_RS05305 PF00483 Nucleotidyl transferase SYN_RS05305 PF01050 Mannose-6-phosphate isomerase SYN_RS05315 PF10672 S-adenosylmethionine-dependent methyltransferase SYN_RS05315 PF17785 PUA-like domain SYN_RS05340 PF01938 TRAM domain SYN_RS05340 PF05958 tRNA (Uracil-5-)-methyltransferase SYN_RS05345 PF00753 Metallo-beta-lactamase superfamily SYN_RS05345 PF12706 Beta-lactamase superfamily domain SYN_RS05355 PF02146 Sir2 family SYN_RS05360 PF00196 Bacterial regulatory proteins, luxR family SYN_RS05360 PF00072 Response regulator receiver domain SYN_RS05370 PF00850 Histone deacetylase domain SYN_RS05375 PF01926 50S ribosome-binding GTPase SYN_RS05375 PF12631 MnmE helical domain SYN_RS05375 PF10396 GTP-binding protein TrmE N-terminus SYN_RS05385 PF14849 YidC periplasmic domain SYN_RS05385 PF02096 60Kd inner membrane protein SYN_RS05390 PF01809 Putative membrane protein insertion efficiency factor SYN_RS05395 PF00825 Ribonuclease P SYN_RS05410 PF00690 Cation transporter/ATPase, N-terminus SYN_RS05410 PF00689 Cation transporting ATPase, C-terminus SYN_RS05435 PF01259 SAICAR synthetase SYN_RS05445 PF01556 DnaJ C terminal domain SYN_RS05445 PF00226 DnaJ domain SYN_RS05445 PF00684 DnaJ central domain SYN_RS05455 PF07883 Cupin domain SYN_RS05460 PF08448 PAS fold SYN_RS05460 PF00512 His Kinase A (phospho-acceptor) domain SYN_RS05460 PF13426 PAS domain SYN_RS05460 PF00072 Response regulator receiver domain SYN_RS05460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SYN_RS05465 PF01548 Transposase SYN_RS05465 PF02371 Transposase IS116/IS110/IS902 family SYN_RS05480 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit SYN_RS05490 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 SYN_RS05490 PF13542 Helix-turn-helix domain of transposase family ISL3 SYN_RS05490 PF01610 Transposase SYN_RS05525 PF02899 Phage integrase, N-terminal SAM-like domain SYN_RS05525 PF00589 Phage integrase family SYN_RS05535 PF00709 Adenylosuccinate synthetase SYN_RS05540 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SYN_RS05540 PF01842 ACT domain SYN_RS05540 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SYN_RS05550 PF18073 Rubredoxin metal binding domain SYN_RS05555 PF00072 Response regulator receiver domain SYN_RS05555 PF00486 Transcriptional regulatory protein, C terminal SYN_RS05565 PF05222 Alanine dehydrogenase/PNT, N-terminal domain SYN_RS05565 PF01262 Alanine dehydrogenase/PNT, C-terminal domain SYN_RS05570 PF00672 HAMP domain SYN_RS05570 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SYN_RS05570 PF12729 Four helix bundle sensory module for signal transduction SYN_RS05585 PF01584 CheW-like domain SYN_RS05590 PF00486 Transcriptional regulatory protein, C terminal SYN_RS05590 PF00072 Response regulator receiver domain SYN_RS05595 PF02954 Bacterial regulatory protein, Fis family SYN_RS05595 PF00072 Response regulator receiver domain SYN_RS05595 PF00158 Sigma-54 interaction domain SYN_RS05600 PF00672 HAMP domain SYN_RS05600 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SYN_RS05600 PF02203 Tar ligand binding domain homologue SYN_RS05605 PF03705 CheR methyltransferase, all-alpha domain SYN_RS05605 PF01739 CheR methyltransferase, SAM binding domain SYN_RS05610 PF03975 CheD chemotactic sensory transduction SYN_RS05620 PF00072 Response regulator receiver domain SYN_RS05630 PF03975 CheD chemotactic sensory transduction SYN_RS05635 PF01339 CheB methylesterase SYN_RS05635 PF00072 Response regulator receiver domain SYN_RS05640 PF01627 Hpt domain SYN_RS05640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SYN_RS05640 PF01584 CheW-like domain SYN_RS05640 PF09078 CheY binding SYN_RS05640 PF02895 Signal transducing histidine kinase, homodimeric domain SYN_RS05645 PF00072 Response regulator receiver domain SYN_RS05655 PF13677 Membrane MotB of proton-channel complex MotA/MotB SYN_RS05655 PF00691 OmpA family SYN_RS05660 PF01618 MotA/TolQ/ExbB proton channel family SYN_RS05675 PF00950 ABC 3 transport family SYN_RS05680 PF00005 ABC transporter SYN_RS05685 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment SYN_RS05685 PF01297 Zinc-uptake complex component A periplasmic SYN_RS05695 PF02899 Phage integrase, N-terminal SAM-like domain SYN_RS05695 PF00589 Phage integrase family SYN_RS05705 PF00793 DAHP synthetase I family SYN_RS05725 PF00005 ABC transporter SYN_RS05730 PF00309 Sigma-54 factor, Activator interacting domain (AID) SYN_RS05730 PF04963 Sigma-54 factor, core binding domain SYN_RS05730 PF04552 Sigma-54, DNA binding domain SYN_RS05735 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein SYN_RS05735 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus SYN_RS05740 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SYN_RS05745 PF07475 HPr Serine kinase C-terminal domain SYN_RS05745 PF02603 HPr Serine kinase N terminus SYN_RS05750 PF03668 P-loop ATPase protein family SYN_RS05760 PF14492 Elongation Factor G, domain II SYN_RS05760 PF00679 Elongation factor G C-terminus SYN_RS05760 PF00009 Elongation factor Tu GTP binding domain SYN_RS05760 PF03144 Elongation factor Tu domain 2 SYN_RS05770 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SYN_RS05770 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SYN_RS05770 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SYN_RS05770 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SYN_RS05780 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain SYN_RS05780 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain SYN_RS05785 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain SYN_RS05785 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain SYN_RS05790 PF13419 Haloacid dehalogenase-like hydrolase SYN_RS05815 PF00206 Lyase SYN_RS05815 PF10397 Adenylosuccinate lyase C-terminus SYN_RS05825 PF00890 FAD binding domain SYN_RS05825 PF02910 Fumarate reductase flavoprotein C-term SYN_RS05830 PF00814 Glycoprotease family SYN_RS05840 PF00398 Ribosomal RNA adenine dimethylase SYN_RS05845 PF02569 Pantoate-beta-alanine ligase SYN_RS05850 PF02261 Aspartate decarboxylase SYN_RS05860 PF02772 S-adenosylmethionine synthetase, central domain SYN_RS05860 PF02773 S-adenosylmethionine synthetase, C-terminal domain SYN_RS05860 PF00438 S-adenosylmethionine synthetase, N-terminal domain SYN_RS05865 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain SYN_RS05865 PF05221 S-adenosyl-L-homocysteine hydrolase SYN_RS05875 PF03739 Lipopolysaccharide export system permease LptF/LptG SYN_RS05890 PF04055 Radical SAM superfamily SYN_RS05900 PF01435 Peptidase family M48 SYN_RS05900 PF13181 Tetratricopeptide repeat SYN_RS05905 PF02224 Cytidylate kinase SYN_RS05910 PF00575 S1 RNA binding domain SYN_RS05915 PF01343 Peptidase family S49 SYN_RS05920 PF03979 Sigma-70 factor, region 1.1 SYN_RS05920 PF04542 Sigma-70 region 2 SYN_RS05920 PF00140 Sigma-70 factor, region 1.2 SYN_RS05920 PF04539 Sigma-70 region 3 SYN_RS05920 PF04545 Sigma-70, region 4 SYN_RS05925 PF00216 Bacterial DNA-binding protein SYN_RS05930 PF04002 RadC-like JAB domain SYN_RS05935 PF02777 Iron/manganese superoxide dismutases, C-terminal domain SYN_RS05935 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain SYN_RS05945 PF00271 Helicase conserved C-terminal domain SYN_RS05945 PF18319 PriA DNA helicase Cys-rich region (CRR) domain SYN_RS05945 PF18074 Primosomal protein N C-terminal domain SYN_RS05945 PF04851 Type III restriction enzyme, res subunit SYN_RS05945 PF17764 3′ DNA-binding domain (3′BD) SYN_RS05950 PF01258 Prokaryotic dksA/traR C4-type zinc finger SYN_RS05955 PF00156 Phosphoribosyl transferase domain SYN_RS05970 PF00528 Binding-protein-dependent transport system inner membrane component SYN_RS05975 PF00528 Binding-protein-dependent transport system inner membrane component SYN_RS05975 PF12911 N-terminal TM domain of oligopeptide transport permease C SYN_RS05980 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SYN_RS05980 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SYN_RS05980 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SYN_RS05980 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SYN_RS05990 PF01026 TatD related DNase SYN_RS05995 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain SYN_RS05995 PF04263 Thiamin pyrophosphokinase, catalytic domain SYN_RS06000 PF02581 Thiamine monophosphate synthase SYN_RS06000 PF08543 Phosphomethylpyrimidine kinase SYN_RS06005 PF01964 Radical SAM ThiC family SYN_RS06010 PF01743 Poly A polymerase head domain SYN_RS06010 PF13735 tRNA nucleotidyltransferase domain 2 putative SYN_RS06010 PF12627 Probable RNA and SrmB- binding site of polymerase A SYN_RS06015 PF00155 Aminotransferase class I and II SYN_RS06025 PF00005 ABC transporter SYN_RS06050 PF05016 ParE toxin of type II toxin-antitoxin system, parDE SYN_RS06060 PF13173 AAA domain SYN_RS06060 PF13635 Domain of unknown function (DUF4143) SYN_RS06070 PF00092 von Willebrand factor type A domain SYN_RS06105 PF00437 Type II/IV secretion system protein SYN_RS06110 PF10609 NUBPL iron-transfer P-loop NTPase SYN_RS06110 PF01883 Iron-sulfur cluster assembly protein SYN_RS06130 PF04972 BON domain SYN_RS06130 PF00263 Bacterial type II and III secretion system protein SYN_RS06130 PF13629 Pilus formation protein N terminal region SYN_RS06160 PF00877 NlpC/P60 family SYN_RS06165 PF12857 TOBE-like domain SYN_RS06165 PF17850 CysA C-terminal regulatory domain SYN_RS06165 PF00005 ABC transporter SYN_RS06170 PF01458 Uncharacterized protein family (UPF0051) SYN_RS06175 PF16363 GDP-mannose 4,6 dehydratase SYN_RS06190 PF01513 ATP-NAD kinase SYN_RS06195 PF02463 RecF/RecN/SMC N terminal domain SYN_RS06210 PF00216 Bacterial DNA-binding protein SYN_RS06215 PF00579 tRNA synthetases class I (W and Y) SYN_RS06220 PF01479 S4 domain SYN_RS06220 PF00849 RNA pseudouridylate synthase SYN_RS06235 PF01295 Adenylate cyclase, class-I SYN_RS06235 PF12633 Adenylate cyclase NT domain SYN_RS06240 PF04408 Helicase associated domain (HA2) SYN_RS06240 PF00270 DEAD/DEAH box helicase SYN_RS06240 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold SYN_RS06240 PF00271 Helicase conserved C-terminal domain SYN_RS06240 PF11898 Domain of unknown function (DUF3418) SYN_RS06245 PF00753 Metallo-beta-lactamase superfamily SYN_RS06250 PF01180 Dihydroorotate dehydrogenase SYN_RS06260 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B SYN_RS06260 PF00175 Oxidoreductase NAD-binding domain SYN_RS06260 PF00970 Oxidoreductase FAD-binding domain SYN_RS06265 PF00583 Acetyltransferase (GNAT) family SYN_RS06295 PF07559 Flagellar basal body protein FlaE SYN_RS06295 PF00460 Flagella basal body rod protein SYN_RS06295 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SYN_RS06305 PF02154 Flagellar motor switch protein FliM SYN_RS06305 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term SYN_RS06310 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term SYN_RS06310 PF04509 CheC-like family SYN_RS06320 PF00813 FliP family SYN_RS06325 PF01313 Bacterial export proteins, family 3 SYN_RS06330 PF01311 Bacterial export proteins, family 1 SYN_RS06335 PF01312 FlhB HrpN YscU SpaS Family SYN_RS06340 PF00771 FHIPEP family SYN_RS06350 PF10609 NUBPL iron-transfer P-loop NTPase SYN_RS06355 PF04539 Sigma-70 region 3 SYN_RS06355 PF04545 Sigma-70, region 4 SYN_RS06355 PF04542 Sigma-70 region 2 SYN_RS06385 PF01312 FlhB HrpN YscU SpaS Family SYN_RS06390 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SYN_RS06395 PF00460 Flagella basal body rod protein SYN_RS06395 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SYN_RS06400 PF13144 Chaperone for flagella basal body P-ring formation SYN_RS06405 PF02107 Flagellar L-ring protein SYN_RS06410 PF02119 Flagellar P-ring protein SYN_RS06425 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SYN_RS06425 PF00460 Flagella basal body rod protein SYN_RS06430 PF00669 Bacterial flagellin N-terminal helical region SYN_RS06430 PF00700 Bacterial flagellin C-terminal helical region SYN_RS06435 PF02599 Global regulator protein family SYN_RS06440 PF02623 FliW protein SYN_RS06455 PF02561 Flagellar protein FliS SYN_RS06465 PF00700 Bacterial flagellin C-terminal helical region SYN_RS06465 PF00669 Bacterial flagellin N-terminal helical region SYN_RS06495 PF01464 Transglycosylase SLT domain SYN_RS06500 PF01134 Glucose inhibited division protein A SYN_RS06505 PF01396 Topoisomerase DNA binding C4 zinc finger SYN_RS06505 PF01751 Toprim domain SYN_RS06505 PF01131 DNA topoisomerase SYN_RS06510 PF17782 DprA winged helix domain SYN_RS06510 PF02481 DNA recombination-mediator protein A SYN_RS06540 PF00764 Arginosuccinate synthase SYN_RS06545 PF00764 Arginosuccinate synthase SYN_RS06580 PF00301 Rubredoxin SYN_RS06600 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ SYN_RS06605 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 SYN_RS06605 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain SYN_RS06615 PF02754 Cysteine-rich domain SYN_RS06615 PF13183 4Fe-4S dicluster domain SYN_RS06620 PF16901 C-terminal domain of alpha-glycerophosphate oxidase SYN_RS06620 PF01266 FAD dependent oxidoreductase SYN_RS06635 PF01230 HIT domain SYN_RS06640 PF00872 Transposase, Mutator family SYN_RS06655 PF02979 Nitrile hydratase, alpha chain SYN_RS06660 PF04055 Radical SAM superfamily SYN_RS06660 PF06463 Molybdenum Cofactor Synthesis C SYN_RS06675 PF03453 MoeA N-terminal region (domain I and II) SYN_RS06675 PF00994 Probable molybdopterin binding domain SYN_RS06675 PF03454 MoeA C-terminal region (domain IV) SYN_RS06680 PF03459 TOBE domain SYN_RS06680 PF00005 ABC transporter SYN_RS06685 PF00528 Binding-protein-dependent transport system inner membrane component SYN_RS06695 PF03459 TOBE domain SYN_RS06700 PF00994 Probable molybdopterin binding domain SYN_RS06700 PF03454 MoeA C-terminal region (domain IV) SYN_RS06700 PF03453 MoeA N-terminal region (domain I and II) SYN_RS06705 PF03453 MoeA N-terminal region (domain I and II) SYN_RS06705 PF00994 Probable molybdopterin binding domain SYN_RS06705 PF03454 MoeA C-terminal region (domain IV) SYN_RS06710 PF00171 Aldehyde dehydrogenase family SYN_RS06720 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 SYN_RS06720 PF13542 Helix-turn-helix domain of transposase family ISL3 SYN_RS06720 PF01610 Transposase SYN_RS06725 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 SYN_RS06725 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain SYN_RS06750 PF04055 Radical SAM superfamily SYN_RS06750 PF00919 Uncharacterized protein family UPF0004 SYN_RS06750 PF01938 TRAM domain SYN_RS06755 PF02577 Bifunctional nuclease SYN_RS06760 PF02899 Phage integrase, N-terminal SAM-like domain SYN_RS06760 PF00589 Phage integrase family SYN_RS06765 PF00227 Proteasome subunit SYN_RS06770 PF07724 AAA domain (Cdc48 subfamily) SYN_RS06770 PF00004 ATPase family associated with various cellular activities (AAA) SYN_RS06775 PF00696 Amino acid kinase family SYN_RS06780 PF00202 Aminotransferase class-III SYN_RS06785 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SYN_RS06785 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SYN_RS06790 PF00764 Arginosuccinate synthase SYN_RS06795 PF00206 Lyase SYN_RS06795 PF14698 Argininosuccinate lyase C-terminal SYN_RS06805 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain SYN_RS06805 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain SYN_RS06810 PF00701 Dihydrodipicolinate synthetase family SYN_RS06815 PF01113 Dihydrodipicolinate reductase, N-terminus SYN_RS06815 PF05173 Dihydrodipicolinate reductase, C-terminus SYN_RS06820 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) SYN_RS06835 PF01066 CDP-alcohol phosphatidyltransferase SYN_RS06865 PF00883 Cytosol aminopeptidase family, catalytic domain SYN_RS06865 PF02789 Cytosol aminopeptidase family, N-terminal domain SYN_RS06870 PF00005 ABC transporter SYN_RS06870 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SYN_RS06875 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SYN_RS06875 PF00005 ABC transporter SYN_RS06880 PF02129 X-Pro dipeptidyl-peptidase (S15 family) SYN_RS06885 PF00313 'Cold-shock' DNA-binding domain SYN_RS06890 PF14492 Elongation Factor G, domain II SYN_RS06890 PF00009 Elongation factor Tu GTP binding domain SYN_RS06890 PF03764 Elongation factor G, domain IV SYN_RS06890 PF03144 Elongation factor Tu domain 2 SYN_RS06890 PF00679 Elongation factor G C-terminus SYN_RS06900 PF01979 Amidohydrolase family SYN_RS06905 PF00768 D-alanyl-D-alanine carboxypeptidase SYN_RS06930 PF17946 RecC C-terminal domain SYN_RS06935 PF13361 UvrD-like helicase C-terminal domain SYN_RS06935 PF00580 UvrD/REP helicase N-terminal domain SYN_RS06935 PF12705 PD-(D/E)XK nuclease superfamily SYN_RS06940 PF13538 UvrD-like helicase C-terminal domain SYN_RS06970 PF00582 Universal stress protein family SYN_RS06975 PF00990 Diguanylate cyclase, GGDEF domain SYN_RS06985 PF03631 Virulence factor BrkB SYN_RS06995 PF00583 Acetyltransferase (GNAT) family SYN_RS06995 PF13508 Acetyltransferase (GNAT) domain SYN_RS07000 PF05191 Adenylate kinase, active site lid SYN_RS07005 PF00580 UvrD/REP helicase N-terminal domain SYN_RS07005 PF13361 UvrD-like helicase C-terminal domain SYN_RS07010 PF00682 HMGL-like SYN_RS07015 PF01336 OB-fold nucleic acid binding domain SYN_RS07015 PF00152 tRNA synthetases class II (D, K and N) SYN_RS07015 PF02938 GAD domain SYN_RS07020 PF13393 Histidyl-tRNA synthetase SYN_RS07020 PF03129 Anticodon binding domain SYN_RS07025 PF12706 Beta-lactamase superfamily domain SYN_RS07030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SYN_RS07030 PF00512 His Kinase A (phospho-acceptor) domain SYN_RS07030 PF00989 PAS fold SYN_RS07035 PF02954 Bacterial regulatory protein, Fis family SYN_RS07035 PF00072 Response regulator receiver domain SYN_RS07035 PF00158 Sigma-54 interaction domain SYN_RS07040 PF01368 DHH family SYN_RS07040 PF02272 DHHA1 domain SYN_RS07040 PF10141 Single-strand DNA-specific exonuclease, C terminal domain SYN_RS07040 PF17768 RecJ OB domain SYN_RS07045 PF04055 Radical SAM superfamily SYN_RS07045 PF13186 Iron-sulfur cluster-binding domain SYN_RS07055 PF02615 Malate/L-lactate dehydrogenase SYN_RS07070 PF01451 Low molecular weight phosphotyrosine protein phosphatase SYN_RS07080 PF12849 PBP superfamily domain SYN_RS07085 PF00528 Binding-protein-dependent transport system inner membrane component SYN_RS07090 PF00528 Binding-protein-dependent transport system inner membrane component SYN_RS07095 PF00005 ABC transporter SYN_RS07100 PF01895 PhoU domain SYN_RS07110 PF00166 Chaperonin 10 Kd subunit SYN_RS07115 PF00118 TCP-1/cpn60 chaperonin family SYN_RS07120 PF08264 Anticodon-binding domain of tRNA SYN_RS07120 PF06827 Zinc finger found in FPG and IleRS SYN_RS07120 PF00133 tRNA synthetases class I (I, L, M and V) SYN_RS07125 PF01252 Signal peptidase (SPase) II SYN_RS07130 PF00977 Histidine biosynthesis protein SYN_RS07135 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SYN_RS07145 PF00005 ABC transporter SYN_RS07155 PF14245 Type IV pilin PilA SYN_RS07155 PF07963 Prokaryotic N-terminal methylation motif SYN_RS07180 PF00270 DEAD/DEAH box helicase SYN_RS07180 PF09369 Domain of unknown function (DUF1998) SYN_RS07180 PF00271 Helicase conserved C-terminal domain SYN_RS07200 PF04359 Protein of unknown function (DUF493) SYN_RS07205 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SYN_RS07205 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SYN_RS07210 PF00155 Aminotransferase class I and II SYN_RS07215 PF14489 QueF-like protein SYN_RS07220 PF01554 MatE SYN_RS07235 PF09312 SurA N-terminal domain SYN_RS07235 PF00639 PPIC-type PPIASE domain SYN_RS07240 PF02548 Ketopantoate hydroxymethyltransferase SYN_RS07250 PF13419 Haloacid dehalogenase-like hydrolase SYN_RS07255 PF01171 PP-loop family SYN_RS07255 PF11734 TilS substrate C-terminal domain SYN_RS07260 PF06480 FtsH Extracellular SYN_RS07260 PF17862 AAA+ lid domain SYN_RS07260 PF01434 Peptidase family M41 SYN_RS07260 PF00004 ATPase family associated with various cellular activities (AAA) SYN_RS07265 PF00809 Pterin binding enzyme SYN_RS07270 PF01648 4'-phosphopantetheinyl transferase superfamily SYN_RS07275 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE SYN_RS07280 PF00696 Amino acid kinase family SYN_RS07280 PF01842 ACT domain SYN_RS07280 PF13840 ACT domain SYN_RS07285 PF10531 SLBB domain SYN_RS07290 PF01464 Transglycosylase SLT domain SYN_RS07305 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SYN_RS07305 PF05697 Bacterial trigger factor protein (TF) SYN_RS07305 PF05698 Bacterial trigger factor protein (TF) C-terminus SYN_RS07310 PF00574 Clp protease SYN_RS07315 PF07724 AAA domain (Cdc48 subfamily) SYN_RS07315 PF10431 C-terminal, D2-small domain, of ClpB protein SYN_RS07315 PF06689 ClpX C4-type zinc finger SYN_RS07320 PF05362 Lon protease (S16) C-terminal proteolytic domain SYN_RS07320 PF02190 ATP-dependent protease La (LON) substrate-binding domain SYN_RS07320 PF00004 ATPase family associated with various cellular activities (AAA) SYN_RS07340 PF00795 Carbon-nitrogen hydrolase SYN_RS07345 PF03462 PCRF domain SYN_RS07345 PF00472 RF-1 domain SYN_RS07350 PF01476 LysM domain SYN_RS07350 PF01464 Transglycosylase SLT domain SYN_RS07355 PF02130 Uncharacterized protein family UPF0054 SYN_RS07360 PF01966 HD domain SYN_RS07360 PF07698 7TM receptor with intracellular HD hydrolase SYN_RS07360 PF07697 7TM-HD extracellular SYN_RS07365 PF02562 PhoH-like protein SYN_RS07370 PF07687 Peptidase dimerisation domain SYN_RS07370 PF01546 Peptidase family M20/M25/M40 SYN_RS07375 PF05193 Peptidase M16 inactive domain SYN_RS07380 PF00675 Insulinase (Peptidase family M16) SYN_RS07380 PF05193 Peptidase M16 inactive domain SYN_RS07390 PF04055 Radical SAM superfamily SYN_RS07390 PF08497 Radical SAM N-terminal SYN_RS07390 PF11842 Domain of unknown function (DUF3362) SYN_RS07395 PF02441 Flavoprotein SYN_RS07395 PF04127 DNA / pantothenate metabolism flavoprotein SYN_RS07400 PF03167 Uracil DNA glycosylase superfamily SYN_RS07410 PF01145 SPFH domain / Band 7 family SYN_RS07430 PF17969 L,D-transpeptidase C-terminal domain SYN_RS07430 PF03734 L,D-transpeptidase catalytic domain SYN_RS07440 PF06969 HemN C-terminal domain SYN_RS07440 PF04055 Radical SAM superfamily SYN_RS07445 PF03144 Elongation factor Tu domain 2 SYN_RS07445 PF00679 Elongation factor G C-terminus SYN_RS07445 PF14492 Elongation Factor G, domain II SYN_RS07445 PF00009 Elongation factor Tu GTP binding domain SYN_RS07445 PF06421 GTP-binding protein LepA C-terminus SYN_RS07460 PF00155 Aminotransferase class I and II SYN_RS07465 PF00708 Acylphosphatase SYN_RS07470 PF00533 BRCA1 C Terminus (BRCT) domain SYN_RS07470 PF12826 Helix-hairpin-helix motif SYN_RS07470 PF03119 NAD-dependent DNA ligase C4 zinc finger domain SYN_RS07470 PF03120 NAD-dependent DNA ligase OB-fold domain SYN_RS07470 PF01653 NAD-dependent DNA ligase adenylation domain SYN_RS07485 PF01230 HIT domain SYN_RS07500 PF00994 Probable molybdopterin binding domain SYN_RS07505 PF03764 Elongation factor G, domain IV SYN_RS07505 PF00009 Elongation factor Tu GTP binding domain SYN_RS07505 PF03144 Elongation factor Tu domain 2 SYN_RS07505 PF14492 Elongation Factor G, domain II SYN_RS07505 PF00679 Elongation factor G C-terminus SYN_RS07510 PF02785 Biotin carboxylase C-terminal domain SYN_RS07510 PF00289 Biotin carboxylase, N-terminal domain SYN_RS07510 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SYN_RS07515 PF00682 HMGL-like SYN_RS07515 PF02436 Conserved carboxylase domain SYN_RS07515 PF00364 Biotin-requiring enzyme SYN_RS07525 PF13538 UvrD-like helicase C-terminal domain SYN_RS07525 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain SYN_RS07525 PF14490 Helix-hairpin-helix containing domain SYN_RS07530 PF07516 SecA Wing and Scaffold domain SYN_RS07530 PF01043 SecA preprotein cross-linking domain SYN_RS07530 PF07517 SecA DEAD-like domain SYN_RS07530 PF02810 SEC-C motif SYN_RS07535 PF01960 ArgJ family SYN_RS07545 PF14760 Rnk N-terminus SYN_RS07545 PF01272 Transcription elongation factor, GreA/GreB, C-term SYN_RS07550 PF00318 Ribosomal protein S2 SYN_RS07555 PF00889 Elongation factor TS SYN_RS07560 PF00696 Amino acid kinase family SYN_RS07565 PF01765 Ribosome recycling factor SYN_RS07570 PF01255 Putative undecaprenyl diphosphate synthase SYN_RS07580 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase SYN_RS07580 PF13288 DXP reductoisomerase C-terminal domain SYN_RS07580 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain SYN_RS07585 PF17820 PDZ domain SYN_RS07585 PF02163 Peptidase family M50 SYN_RS07590 PF00814 Glycoprotease family SYN_RS07595 PF02666 Phosphatidylserine decarboxylase SYN_RS07600 PF01066 CDP-alcohol phosphatidyltransferase SYN_RS07605 PF01118 Semialdehyde dehydrogenase, NAD binding domain SYN_RS07605 PF02774 Semialdehyde dehydrogenase, dimerisation domain SYN_RS07615 PF01467 Cytidylyltransferase-like SYN_RS07620 PF00155 Aminotransferase class I and II SYN_RS07625 PF00156 Phosphoribosyl transferase domain SYN_RS07630 PF04551 GcpE protein SYN_RS07635 PF04073 Aminoacyl-tRNA editing domain SYN_RS07635 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SYN_RS07635 PF03129 Anticodon binding domain SYN_RS07640 PF02824 TGS domain SYN_RS07640 PF04607 Region found in RelA / SpoT proteins SYN_RS07640 PF13291 ACT domain SYN_RS07645 PF08239 Bacterial SH3 domain SYN_RS07645 PF01520 N-acetylmuramoyl-L-alanine amidase SYN_RS07650 PF03725 3' exoribonuclease family, domain 2 SYN_RS07650 PF01138 3' exoribonuclease family, domain 1 SYN_RS07655 PF01725 Ham1 family SYN_RS07675 PF02580 D-Tyr-tRNA(Tyr) deacylase SYN_RS07685 PF00571 CBS domain SYN_RS07685 PF00478 IMP dehydrogenase / GMP reductase domain SYN_RS07690 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SYN_RS07690 PF14579 Helix-hairpin-helix motif SYN_RS07690 PF02811 PHP domain SYN_RS07690 PF01336 OB-fold nucleic acid binding domain SYN_RS07690 PF07733 Bacterial DNA polymerase III alpha NTPase domain SYN_RS07700 PF00226 DnaJ domain SYN_RS07700 PF01556 DnaJ C terminal domain SYN_RS07700 PF00684 DnaJ central domain SYN_RS07710 PF03061 Thioesterase superfamily SYN_RS07715 PF10143 2,3-bisphosphoglycerate-independent phosphoglycerate mutase SYN_RS07715 PF01676 Metalloenzyme superfamily SYN_RS07720 PF00742 Homoserine dehydrogenase SYN_RS07720 PF01842 ACT domain SYN_RS07720 PF03447 Homoserine dehydrogenase, NAD binding domain SYN_RS07725 PF02769 AIR synthase related protein, C-terminal domain SYN_RS07725 PF00586 AIR synthase related protein, N-terminal domain SYN_RS07730 PF00551 Formyl transferase SYN_RS07735 PF00365 Phosphofructokinase SYN_RS07740 PF00365 Phosphofructokinase SYN_RS07785 PF11855 Protein of unknown function (DUF3375) SYN_RS07805 PF08774 VRR-NUC domain SYN_RS07805 PF04851 Type III restriction enzyme, res subunit SYN_RS07810 PF01555 DNA methylase SYN_RS07810 PF18273 Type III R-M EcoP15I C-terminal domain SYN_RS07820 PF00271 Helicase conserved C-terminal domain SYN_RS07820 PF00176 SNF2 family N-terminal domain SYN_RS07920 PF13361 UvrD-like helicase C-terminal domain SYN_RS07920 PF00580 UvrD/REP helicase N-terminal domain SYN_RS07935 PF00271 Helicase conserved C-terminal domain SYN_RS07935 PF00176 SNF2 family N-terminal domain SYN_RS07950 PF13280 WYL domain SYN_RS07950 PF08279 HTH domain SYN_RS08020 PF06834 TraU protein SYN_RS08045 PF06122 Conjugative relaxosome accessory transposon protein SYN_RS08090 PF01464 Transglycosylase SLT domain SYN_RS08110 PF12848 ABC transporter SYN_RS08110 PF00005 ABC transporter SYN_RS08160 PF01695 IstB-like ATP binding protein SYN_RS08165 PF00665 Integrase core domain SYN_RS08175 PF04607 Region found in RelA / SpoT proteins SYN_RS08175 PF13291 ACT domain SYN_RS08175 PF02824 TGS domain SYN_RS08185 PF04041 beta-1,4-mannooligosaccharide phosphorylase SYN_RS08190 PF01434 Peptidase family M41 SYN_RS08190 PF06480 FtsH Extracellular SYN_RS08190 PF17862 AAA+ lid domain SYN_RS08190 PF00004 ATPase family associated with various cellular activities (AAA) SYN_RS08200 PF01556 DnaJ C terminal domain SYN_RS08200 PF00684 DnaJ central domain SYN_RS08200 PF00226 DnaJ domain SYN_RS08205 PF00011 Hsp20/alpha crystallin family SYN_RS08210 PF00166 Chaperonin 10 Kd subunit SYN_RS08215 PF00118 TCP-1/cpn60 chaperonin family SYN_RS08225 PF00580 UvrD/REP helicase N-terminal domain SYN_RS08225 PF13361 UvrD-like helicase C-terminal domain SYN_RS08245 PF00589 Phage integrase family SYN_RS08245 PF13356 Arm DNA-binding domain SYN_RS08250 PF01668 SmpB protein SYN_RS08255 PF01171 PP-loop family SYN_RS08260 PF03144 Elongation factor Tu domain 2 SYN_RS08260 PF09106 Elongation factor SelB, winged helix SYN_RS08260 PF09107 Elongation factor SelB, winged helix SYN_RS08260 PF00009 Elongation factor Tu GTP binding domain SYN_RS08265 PF01966 HD domain SYN_RS08275 PF00682 HMGL-like SYN_RS08275 PF08502 LeuA allosteric (dimerisation) domain SYN_RS08280 PF01300 Telomere recombination SYN_RS08285 PF00575 S1 RNA binding domain SYN_RS08285 PF12111 Polyribonucleotide phosphorylase C terminal SYN_RS08285 PF10150 Ribonuclease E/G family SYN_RS08290 PF03807 NADP oxidoreductase coenzyme F420-dependent SYN_RS08290 PF14748 Pyrroline-5-carboxylate reductase dimerisation SYN_RS08295 PF02325 YGGT family SYN_RS08300 PF02594 Uncharacterised ACR, YggU family COG1872 SYN_RS08305 PF03023 Lipid II flippase MurJ SYN_RS08310 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SYN_RS08310 PF02403 Seryl-tRNA synthetase N-terminal domain SYN_RS08330 PF01695 IstB-like ATP binding protein SYN_RS08345 PF03073 TspO/MBR family SYN_RS08350 PF13673 Acetyltransferase (GNAT) domain SYN_RS08350 PF00583 Acetyltransferase (GNAT) family SYN_RS08365 PF11818 C-terminal domain of tail specific protease (DUF3340) SYN_RS08365 PF00595 PDZ domain SYN_RS08365 PF17804 Tail specific protease N-terminal domain SYN_RS08365 PF03572 Peptidase family S41 SYN_RS08370 PF00595 PDZ domain SYN_RS08390 PF00216 Bacterial DNA-binding protein SYN_RS08420 PF11799 impB/mucB/samB family C-terminal domain SYN_RS08420 PF00817 impB/mucB/samB family SYN_RS08420 PF11798 IMS family HHH motif SYN_RS08430 PF01268 Formate--tetrahydrofolate ligase SYN_RS08440 PF05726 Pirin C-terminal cupin domain SYN_RS08440 PF02678 Pirin SYN_RS08455 PF01467 Cytidylyltransferase-like SYN_RS08460 PF00171 Aldehyde dehydrogenase family SYN_RS08475 PF00905 Penicillin binding protein transpeptidase domain SYN_RS08475 PF00912 Transglycosylase SYN_RS08480 PF03330 Lytic transglycolase SYN_RS08490 PF00005 ABC transporter SYN_RS08490 PF12704 MacB-like periplasmic core domain SYN_RS08490 PF02687 FtsX-like permease family SYN_RS08495 PF00005 ABC transporter SYN_RS08500 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SYN_RS08510 PF01916 Deoxyhypusine synthase SYN_RS08515 PF02601 Exonuclease VII, large subunit SYN_RS08515 PF13742 OB-fold nucleic acid binding domain SYN_RS08520 PF02609 Exonuclease VII small subunit SYN_RS08525 PF00348 Polyprenyl synthetase SYN_RS08530 PF13292 1-deoxy-D-xylulose-5-phosphate synthase SYN_RS08530 PF02780 Transketolase, C-terminal domain SYN_RS08530 PF02779 Transketolase, pyrimidine binding domain SYN_RS08535 PF01728 FtsJ-like methyltransferase SYN_RS08535 PF01479 S4 domain SYN_RS08540 PF02401 LytB protein SYN_RS08550 PF01106 NifU-like domain SYN_RS08555 PF00037 4Fe-4S binding domain SYN_RS08560 PF02223 Thymidylate kinase SYN_RS08565 PF12169 DNA polymerase III subunits gamma and tau domain III SYN_RS08570 PF04468 PSP1 C-terminal conserved region SYN_RS08575 PF01588 Putative tRNA binding domain SYN_RS08575 PF09334 tRNA synthetases class I (M) SYN_RS08575 PF00133 tRNA synthetases class I (I, L, M and V) SYN_RS08600 PF01784 NIF3 (NGG1p interacting factor 3) SYN_RS08605 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain SYN_RS08615 PF03741 Integral membrane protein TerC family SYN_RS08630 PF00270 DEAD/DEAH box helicase SYN_RS08630 PF00271 Helicase conserved C-terminal domain SYN_RS08645 PF07995 Glucose / Sorbosone dehydrogenase SYN_RS08650 PF01817 Chorismate mutase type II SYN_RS08650 PF02153 Prephenate dehydrogenase SYN_RS08655 PF01264 Chorismate synthase SYN_RS08660 PF01202 Shikimate kinase SYN_RS08665 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SYN_RS08670 PF01488 Shikimate / quinate 5-dehydrogenase SYN_RS08670 PF08501 Shikimate dehydrogenase substrate binding domain SYN_RS08670 PF18317 Shikimate 5'-dehydrogenase C-terminal domain SYN_RS08675 PF01487 Type I 3-dehydroquinase SYN_RS08680 PF01761 3-dehydroquinate synthase SYN_RS08685 PF00793 DAHP synthetase I family SYN_RS08685 PF18152 DAHP synthase ferredoxin-like domain SYN_RS08690 PF00290 Tryptophan synthase alpha chain SYN_RS08695 PF00291 Pyridoxal-phosphate dependent enzyme SYN_RS08700 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase SYN_RS08705 PF00218 Indole-3-glycerol phosphate synthase SYN_RS08710 PF00591 Glycosyl transferase family, a/b domain SYN_RS08710 PF02885 Glycosyl transferase family, helical bundle domain SYN_RS08715 PF00117 Glutamine amidotransferase class-I SYN_RS08720 PF00425 chorismate binding enzyme SYN_RS08720 PF04715 Anthranilate synthase component I, N terminal region SYN_RS08730 PF01544 CorA-like Mg2+ transporter protein SYN_RS08735 PF01613 Flavin reductase like domain SYN_RS08750 PF01965 DJ-1/PfpI family SYN_RS08780 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SYN_RS08780 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SYN_RS08785 PF02016 LD-carboxypeptidase N-terminal domain SYN_RS08785 PF17676 LD-carboxypeptidase C-terminal domain SYN_RS08790 PF07670 Nucleoside recognition SYN_RS08795 PF07670 Nucleoside recognition SYN_RS08820 PF02954 Bacterial regulatory protein, Fis family SYN_RS08820 PF00158 Sigma-54 interaction domain SYN_RS08820 PF01590 GAF domain SYN_RS08825 PF02386 Cation transport protein SYN_RS08830 PF02254 TrkA-N domain SYN_RS08830 PF02080 TrkA-C domain SYN_RS08835 PF00158 Sigma-54 interaction domain SYN_RS08835 PF00072 Response regulator receiver domain SYN_RS08835 PF02954 Bacterial regulatory protein, Fis family SYN_RS08845 PF01979 Amidohydrolase family SYN_RS08850 PF16193 AAA C-terminal domain SYN_RS08850 PF12002 MgsA AAA+ ATPase C terminal SYN_RS08850 PF00004 ATPase family associated with various cellular activities (AAA) SYN_RS08860 PF00291 Pyridoxal-phosphate dependent enzyme SYN_RS08865 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus SYN_RS08865 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus SYN_RS08875 PF01975 Survival protein SurE SYN_RS08880 PF00012 Hsp70 protein SYN_RS08885 PF01025 GrpE SYN_RS08890 PF13580 SIS domain SYN_RS08900 PF12848 ABC transporter SYN_RS08900 PF00005 ABC transporter SYN_RS08905 PF03061 Thioesterase superfamily SYN_RS08910 PF01654 Cytochrome bd terminal oxidase subunit I SYN_RS08915 PF02322 Cytochrome bd terminal oxidase subunit II SYN_RS08920 PF01741 Large-conductance mechanosensitive channel, MscL SYN_RS08940 PF04972 BON domain SYN_RS08950 PF03458 UPF0126 domain SYN_RS08960 PF01084 Ribosomal protein S18 SYN_RS08970 PF01281 Ribosomal protein L9, N-terminal domain SYN_RS08970 PF03948 Ribosomal protein L9, C-terminal domain SYN_RS08975 PF03796 DnaB-like helicase C terminal domain SYN_RS08975 PF00772 DnaB-like helicase N terminal domain SYN_RS08980 PF00140 Sigma-70 factor, region 1.2 SYN_RS08980 PF04545 Sigma-70, region 4 SYN_RS08980 PF04542 Sigma-70 region 2 SYN_RS08985 PF07724 AAA domain (Cdc48 subfamily) SYN_RS08985 PF00004 ATPase family associated with various cellular activities (AAA) SYN_RS08985 PF10431 C-terminal, D2-small domain, of ClpB protein SYN_RS08985 PF02861 Clp amino terminal domain, pathogenicity island component SYN_RS08985 PF17871 AAA lid domain SYN_RS08990 PF01435 Peptidase family M48 SYN_RS09000 PF08544 GHMP kinases C terminal SYN_RS09000 PF00288 GHMP kinases N terminal domain SYN_RS09010 PF14572 Phosphoribosyl synthetase-associated domain SYN_RS09010 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase SYN_RS09015 PF14693 Ribosomal protein TL5, C-terminal domain SYN_RS09015 PF01386 Ribosomal L25p family SYN_RS09020 PF01195 Peptidyl-tRNA hydrolase SYN_RS09025 PF03030 Inorganic H+ pyrophosphatase SYN_RS09030 PF03030 Inorganic H+ pyrophosphatase SYN_RS09040 PF00072 Response regulator receiver domain SYN_RS09040 PF00158 Sigma-54 interaction domain SYN_RS09040 PF02954 Bacterial regulatory protein, Fis family SYN_RS09045 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 SYN_RS09045 PF01610 Transposase SYN_RS09045 PF13542 Helix-turn-helix domain of transposase family ISL3 SYN_RS09055 PF00009 Elongation factor Tu GTP binding domain SYN_RS09055 PF03764 Elongation factor G, domain IV SYN_RS09055 PF03144 Elongation factor Tu domain 2 SYN_RS09055 PF00679 Elongation factor G C-terminus SYN_RS09055 PF14492 Elongation Factor G, domain II SYN_RS09065 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain SYN_RS09065 PF00437 Type II/IV secretion system protein SYN_RS09070 PF05188 MutS domain II SYN_RS09070 PF05192 MutS domain III SYN_RS09070 PF01624 MutS domain I SYN_RS09070 PF00488 MutS domain V SYN_RS09070 PF05190 MutS family domain IV SYN_RS09075 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV SYN_RS09085 PF00912 Transglycosylase SYN_RS09090 PF00877 NlpC/P60 family SYN_RS09095 PF00330 Aconitase family (aconitate hydratase) SYN_RS09100 PF00180 Isocitrate/isopropylmalate dehydrogenase SYN_RS09105 PF04055 Radical SAM superfamily SYN_RS09145 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain SYN_RS09145 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain SYN_RS09150 PF00378 Enoyl-CoA hydratase/isomerase SYN_RS09155 PF02649 Type I GTP cyclohydrolase folE2 SYN_RS09160 PF02540 NAD synthase SYN_RS09160 PF00795 Carbon-nitrogen hydrolase SYN_RS09170 PF01844 HNH endonuclease SYN_RS09195 PF05378 Hydantoinase/oxoprolinase N-terminal region SYN_RS09195 PF01968 Hydantoinase/oxoprolinase SYN_RS09200 PF00850 Histone deacetylase domain SYN_RS09215 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain SYN_RS09215 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain SYN_RS09225 PF00132 Bacterial transferase hexapeptide (six repeats) SYN_RS09225 PF00101 Ribulose bisphosphate carboxylase, small chain SYN_RS09230 PF01121 Dephospho-CoA kinase SYN_RS09245 PF13607 Succinyl-CoA ligase like flavodoxin domain SYN_RS09245 PF00583 Acetyltransferase (GNAT) family SYN_RS09245 PF13380 CoA binding domain SYN_RS09250 PF00004 ATPase family associated with various cellular activities (AAA) SYN_RS09250 PF17862 AAA+ lid domain SYN_RS09250 PF06480 FtsH Extracellular SYN_RS09250 PF01434 Peptidase family M41 SYN_RS09255 PF00343 Carbohydrate phosphorylase SYN_RS09265 PF03309 Type III pantothenate kinase SYN_RS09270 PF08279 HTH domain SYN_RS09270 PF02237 Biotin protein ligase C terminal domain SYN_RS09270 PF03099 Biotin/lipoate A/B protein ligase family SYN_RS09275 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain SYN_RS09275 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain SYN_RS09280 PF10458 Valyl tRNA synthetase tRNA binding arm SYN_RS09280 PF00133 tRNA synthetases class I (I, L, M and V) SYN_RS09280 PF08264 Anticodon-binding domain of tRNA SYN_RS09295 PF08676 MutL C terminal dimerisation domain SYN_RS09295 PF01119 DNA mismatch repair protein, C-terminal domain SYN_RS09310 PF16123 Hydroxyacylglutathione hydrolase C-terminus SYN_RS09310 PF00753 Metallo-beta-lactamase superfamily SYN_RS09340 PF04321 RmlD substrate binding domain SYN_RS09345 PF01416 tRNA pseudouridine synthase SYN_RS09350 PF00162 Phosphoglycerate kinase SYN_RS09355 PF01039 Carboxyl transferase domain SYN_RS09360 PF00749 tRNA synthetases class I (E and Q), catalytic domain SYN_RS09365 PF02542 YgbB family SYN_RS09370 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase SYN_RS09385 PF04055 Radical SAM superfamily SYN_RS09385 PF06968 Biotin and Thiamin Synthesis associated domain SYN_RS09390 PF01476 LysM domain SYN_RS09390 PF01551 Peptidase family M23 SYN_RS09405 PF06415 BPG-independent PGAM N-terminus (iPGM_N) SYN_RS09405 PF01676 Metalloenzyme superfamily SYN_RS09410 PF01661 Macro domain SYN_RS09425 PF05175 Methyltransferase small domain SYN_RS09435 PF00581 Rhodanese-like domain SYN_RS09435 PF00899 ThiF family SYN_RS09440 PF04055 Radical SAM superfamily SYN_RS09440 PF06968 Biotin and Thiamin Synthesis associated domain SYN_RS09445 PF05690 Thiazole biosynthesis protein ThiG SYN_RS09455 PF02581 Thiamine monophosphate synthase SYN_RS09475 PF00291 Pyridoxal-phosphate dependent enzyme SYN_RS09485 PF03958 Bacterial type II/III secretion system short domain SYN_RS09485 PF00263 Bacterial type II and III secretion system protein SYN_RS09490 PF01464 Transglycosylase SLT domain SYN_RS09490 PF10145 Phage-related minor tail protein SYN_RS09490 PF01551 Peptidase family M23 SYN_RS09530 PF00482 Type II secretion system (T2SS), protein F SYN_RS09535 PF00437 Type II/IV secretion system protein SYN_RS09535 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain SYN_RS09540 PF07963 Prokaryotic N-terminal methylation motif SYN_RS09540 PF08334 Type II secretion system (T2SS), protein G SYN_RS09550 PF07837 Formiminotransferase domain, N-terminal subdomain SYN_RS09550 PF02971 Formiminotransferase domain SYN_RS09560 PF01209 ubiE/COQ5 methyltransferase family SYN_RS09570 PF02881 SRP54-type protein, helical bundle domain SYN_RS09570 PF00448 SRP54-type protein, GTPase domain SYN_RS09575 PF12848 ABC transporter SYN_RS09575 PF16326 ABC transporter C-terminal domain SYN_RS09575 PF00005 ABC transporter SYN_RS09585 PF02690 Na+/Pi-cotransporter SYN_RS09590 PF02915 Rubrerythrin SYN_RS09600 PF00571 CBS domain SYN_RS09600 PF01380 SIS domain SYN_RS09610 PF01894 Uncharacterised protein family UPF0047 SYN_RS09615 PF00731 AIR carboxylase SYN_RS09620 PF02540 NAD synthase SYN_RS09625 PF01969 Protein of unknown function DUF111 SYN_RS09630 PF01402 Ribbon-helix-helix protein, copG family SYN_RS09630 PF08753 NikR C terminal nickel binding domain SYN_RS09640 PF00795 Carbon-nitrogen hydrolase SYN_RS09650 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SYN_RS09650 PF02770 Acyl-CoA dehydrogenase, middle domain SYN_RS09650 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SYN_RS09655 PF01039 Carboxyl transferase domain SYN_RS09660 PF12804 MobA-like NTP transferase domain SYN_RS09665 PF06733 DEAD_2 SYN_RS09665 PF13307 Helicase C-terminal domain SYN_RS09740 PF02384 N-6 DNA Methylase SYN_RS09755 PF18766 SWI2/SNF2 ATPase SYN_RS09755 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) SYN_RS09755 PF11867 Domain of unknown function (DUF3387) SYN_RS09830 PF13380 CoA binding domain SYN_RS09830 PF13607 Succinyl-CoA ligase like flavodoxin domain SYN_RS09850 PF01047 MarR family SYN_RS09860 PF01515 Phosphate acetyl/butaryl transferase SYN_RS09865 PF00871 Acetokinase family SYN_RS09900 PF00282 Pyridoxal-dependent decarboxylase conserved domain SYN_RS09905 PF00872 Transposase, Mutator family SYN_RS09910 PF08212 Lipocalin-like domain SYN_RS09915 PF13649 Methyltransferase domain SYN_RS09940 PF01554 MatE SYN_RS09950 PF05872 Bacterial protein of unknown function (DUF853) SYN_RS09980 PF00578 AhpC/TSA family SYN_RS10020 PF03423 Carbohydrate binding domain (family 25) SYN_RS10020 PF01373 Glycosyl hydrolase family 14 SYN_RS10020 PF00128 Alpha amylase, catalytic domain SYN_RS10025 PF04228 Putative neutral zinc metallopeptidase SYN_RS10035 PF09997 Predicted membrane protein (DUF2238) SYN_RS10045 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SYN_RS10050 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg SYN_RS10050 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II SYN_RS10055 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase SYN_RS10070 PF00589 Phage integrase family SYN_RS10130 PF13545 Crp-like helix-turn-helix domain SYN_RS10130 PF00027 Cyclic nucleotide-binding domain SYN_RS10135 PF01678 Diaminopimelate epimerase SYN_RS10150 PF00872 Transposase, Mutator family SYN_RS10190 PF00293 NUDIX domain SYN_RS10190 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain SYN_RS10190 PF09297 NADH pyrophosphatase zinc ribbon domain SYN_RS10200 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SYN_RS10205 PF02583 Metal-sensitive transcriptional repressor SYN_RS10210 PF13247 4Fe-4S dicluster domain SYN_RS10225 PF01610 Transposase SYN_RS10225 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 SYN_RS10225 PF13542 Helix-turn-helix domain of transposase family ISL3 SYN_RS10235 PF01556 DnaJ C terminal domain SYN_RS10235 PF00226 DnaJ domain SYN_RS10235 PF00684 DnaJ central domain SYN_RS10250 PF00890 FAD binding domain SYN_RS10250 PF02910 Fumarate reductase flavoprotein C-term SYN_RS10255 PF00849 RNA pseudouridylate synthase SYN_RS10305 PF00850 Histone deacetylase domain SYN_RS10310 PF11992 Domain of unknown function (DUF3488) SYN_RS10310 PF13559 Domain of unknown function (DUF4129) SYN_RS10310 PF01841 Transglutaminase-like superfamily SYN_RS10325 PF00005 ABC transporter SYN_RS10330 PF02687 FtsX-like permease family SYN_RS10330 PF12704 MacB-like periplasmic core domain SYN_RS10340 PF13380 CoA binding domain SYN_RS10340 PF13607 Succinyl-CoA ligase like flavodoxin domain SYN_RS10340 PF00583 Acetyltransferase (GNAT) family SYN_RS10360 PF01985 CRS1 / YhbY (CRM) domain SYN_RS10380 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase SYN_RS10385 PF04542 Sigma-70 region 2 SYN_RS10385 PF04545 Sigma-70, region 4 SYN_RS10385 PF04539 Sigma-70 region 3 SYN_RS10385 PF00140 Sigma-70 factor, region 1.2 SYN_RS10385 PF03979 Sigma-70 factor, region 1.1 SYN_RS10385 PF04546 Sigma-70, non-essential region SYN_RS10390 PF08275 DNA primase catalytic core, N-terminal domain SYN_RS10390 PF10410 DnaB-helicase binding domain of primase SYN_RS10390 PF01807 CHC2 zinc finger SYN_RS10395 PF09424 Yqey-like protein SYN_RS10400 PF01230 HIT domain SYN_RS10405 PF00977 Histidine biosynthesis protein SYN_RS10415 PF00475 Imidazoleglycerol-phosphate dehydratase SYN_RS10425 PF01502 Phosphoribosyl-AMP cyclohydrolase SYN_RS10440 PF01048 Phosphorylase superfamily SYN_RS10445 PF00085 Thioredoxin SYN_RS10460 PF02146 Sir2 family SYN_RS10465 PF03819 MazG nucleotide pyrophosphohydrolase domain SYN_RS10475 PF02547 Queuosine biosynthesis protein SYN_RS10480 PF01702 Queuine tRNA-ribosyltransferase SYN_RS10490 PF07549 SecD/SecF GG Motif SYN_RS10490 PF02355 Protein export membrane protein SYN_RS10495 PF07549 SecD/SecF GG Motif SYN_RS10495 PF02355 Protein export membrane protein SYN_RS10505 PF10502 Signal peptidase, peptidase S26 SYN_RS10510 PF01566 Natural resistance-associated macrophage protein SYN_RS10515 PF01769 Divalent cation transporter SYN_RS10515 PF03448 MgtE intracellular N domain SYN_RS10515 PF00571 CBS domain SYN_RS10520 PF00156 Phosphoribosyl transferase domain SYN_RS10525 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SYN_RS10525 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SYN_RS10530 PF01979 Amidohydrolase family SYN_RS10535 PF01769 Divalent cation transporter SYN_RS10535 PF03448 MgtE intracellular N domain SYN_RS10535 PF00571 CBS domain SYN_RS10540 PF02565 Recombination protein O C terminal SYN_RS10540 PF11967 Recombination protein O N terminal SYN_RS10545 PF02091 Glycyl-tRNA synthetase alpha subunit SYN_RS10550 PF05746 DALR anticodon binding domain SYN_RS10550 PF02092 Glycyl-tRNA synthetase beta subunit SYN_RS10560 PF00582 Universal stress protein family SYN_RS10595 PF03958 Bacterial type II/III secretion system short domain SYN_RS10595 PF00263 Bacterial type II and III secretion system protein SYN_RS10600 PF00437 Type II/IV secretion system protein SYN_RS10605 PF00482 Type II secretion system (T2SS), protein F SYN_RS10610 PF08334 Type II secretion system (T2SS), protein G SYN_RS10610 PF07963 Prokaryotic N-terminal methylation motif SYN_RS10615 PF07963 Prokaryotic N-terminal methylation motif SYN_RS10615 PF12019 Type II transport protein GspH SYN_RS10620 PF02501 Type II secretion system (T2SS), protein I SYN_RS10620 PF07963 Prokaryotic N-terminal methylation motif SYN_RS10650 PF01242 6-pyruvoyl tetrahydropterin synthase SYN_RS10655 PF04055 Radical SAM superfamily SYN_RS10660 PF06508 Queuosine biosynthesis protein QueC SYN_RS10665 PF04191 Phospholipid methyltransferase SYN_RS10670 PF02606 Tetraacyldisaccharide-1-P 4'-kinase SYN_RS10675 PF00664 ABC transporter transmembrane region SYN_RS10675 PF00005 ABC transporter SYN_RS10680 PF02684 Lipid-A-disaccharide synthetase SYN_RS10685 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SYN_RS10685 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SYN_RS10690 PF00132 Bacterial transferase hexapeptide (six repeats) SYN_RS10690 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 SYN_RS10695 PF00132 Bacterial transferase hexapeptide (six repeats) SYN_RS10695 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD SYN_RS10705 PF01103 Surface antigen SYN_RS10705 PF07244 Surface antigen variable number repeat SYN_RS10710 PF00005 ABC transporter SYN_RS10715 PF12704 MacB-like periplasmic core domain SYN_RS10715 PF02687 FtsX-like permease family SYN_RS10720 PF01336 OB-fold nucleic acid binding domain SYN_RS10720 PF00152 tRNA synthetases class II (D, K and N) SYN_RS10725 PF00436 Single-strand binding protein family SYN_RS10730 PF02416 mttA/Hcf106 family SYN_RS10740 PF00459 Inositol monophosphatase family SYN_RS10745 PF00072 Response regulator receiver domain SYN_RS10745 PF13188 PAS domain SYN_RS10745 PF08448 PAS fold SYN_RS10745 PF00512 His Kinase A (phospho-acceptor) domain SYN_RS10745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SYN_RS10755 PF11992 Domain of unknown function (DUF3488) SYN_RS10755 PF01841 Transglutaminase-like superfamily SYN_RS10755 PF13559 Domain of unknown function (DUF4129) SYN_RS10770 PF00535 Glycosyl transferase family 2 SYN_RS10780 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family SYN_RS10785 PF13649 Methyltransferase domain SYN_RS10795 PF00005 ABC transporter SYN_RS10805 PF00535 Glycosyl transferase family 2 SYN_RS10810 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 SYN_RS10810 PF00535 Glycosyl transferase family 2 SYN_RS10825 PF00534 Glycosyl transferases group 1 SYN_RS10825 PF13439 Glycosyltransferase Family 4 SYN_RS10830 PF13439 Glycosyltransferase Family 4 SYN_RS10845 PF07963 Prokaryotic N-terminal methylation motif SYN_RS10845 PF14245 Type IV pilin PilA SYN_RS10855 PF00675 Insulinase (Peptidase family M16) SYN_RS10855 PF05193 Peptidase M16 inactive domain SYN_RS10855 PF08367 Peptidase M16C associated SYN_RS10880 PF04723 Glycine reductase complex selenoprotein A SYN_RS10885 PF04723 Glycine reductase complex selenoprotein A SYN_RS10890 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III SYN_RS10895 PF07355 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) SYN_RS10900 PF07355 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) SYN_RS10905 PF09338 Glycine/sarcosine/betaine reductase component B subunits SYN_RS10920 PF09383 NIL domain SYN_RS10920 PF00005 ABC transporter SYN_RS10935 PF01938 TRAM domain SYN_RS10935 PF04055 Radical SAM superfamily SYN_RS10935 PF00919 Uncharacterized protein family UPF0004 SYN_RS10940 PF14622 Ribonuclease-III-like SYN_RS10940 PF00035 Double-stranded RNA binding motif SYN_RS10945 PF04055 Radical SAM superfamily SYN_RS10945 PF06969 HemN C-terminal domain SYN_RS10950 PF13091 PLD-like domain SYN_RS10955 PF01926 50S ribosome-binding GTPase SYN_RS10955 PF07650 KH domain SYN_RS10960 PF01926 50S ribosome-binding GTPase SYN_RS10960 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal SYN_RS10970 PF13458 Periplasmic binding protein SYN_RS10975 PF02653 Branched-chain amino acid transport system / permease component SYN_RS10980 PF11862 Domain of unknown function (DUF3382) SYN_RS10980 PF02653 Branched-chain amino acid transport system / permease component SYN_RS10985 PF12399 Branched-chain amino acid ATP-binding cassette transporter SYN_RS10985 PF00005 ABC transporter SYN_RS10990 PF00005 ABC transporter SYN_RS11000 PF02190 ATP-dependent protease La (LON) substrate-binding domain SYN_RS11000 PF05362 Lon protease (S16) C-terminal proteolytic domain SYN_RS11000 PF00004 ATPase family associated with various cellular activities (AAA) SYN_RS11020 PF13614 AAA domain SYN_RS11025 PF01471 Putative peptidoglycan binding domain SYN_RS11025 PF13401 AAA domain SYN_RS11035 PF13493 Domain of unknown function (DUF4118) SYN_RS11035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SYN_RS11035 PF00512 His Kinase A (phospho-acceptor) domain SYN_RS11035 PF00989 PAS fold SYN_RS11035 PF08447 PAS fold SYN_RS11035 PF13426 PAS domain SYN_RS11040 PF00196 Bacterial regulatory proteins, luxR family SYN_RS11040 PF00072 Response regulator receiver domain SYN_RS11045 PF00005 ABC transporter SYN_RS11050 PF01061 ABC-2 type transporter SYN_RS11055 PF02021 Uncharacterised protein family UPF0102 SYN_RS11060 PF01351 Ribonuclease HII SYN_RS11065 PF01245 Ribosomal protein L19 SYN_RS11070 PF09936 SAM-dependent RNA methyltransferase SYN_RS11075 PF01746 tRNA (Guanine-1)-methyltransferase SYN_RS11080 PF01782 RimM N-terminal domain SYN_RS11080 PF05239 PRC-barrel domain SYN_RS11090 PF00886 Ribosomal protein S16 SYN_RS11095 PF02978 Signal peptide binding domain SYN_RS11095 PF02881 SRP54-type protein, helical bundle domain SYN_RS11095 PF00448 SRP54-type protein, GTPase domain SYN_RS11105 PF03485 Arginyl tRNA synthetase N terminal domain SYN_RS11105 PF05746 DALR anticodon binding domain SYN_RS11105 PF00750 tRNA synthetases class I (R) SYN_RS11115 PF07963 Prokaryotic N-terminal methylation motif SYN_RS11130 PF00027 Cyclic nucleotide-binding domain SYN_RS11130 PF13545 Crp-like helix-turn-helix domain SYN_RS11135 PF01478 Type IV leader peptidase family SYN_RS11135 PF06750 Bacterial Peptidase A24 N-terminal domain SYN_RS11140 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase SYN_RS11150 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SYN_RS11150 PF01872 RibD C-terminal domain SYN_RS11165 PF03462 PCRF domain SYN_RS11165 PF00472 RF-1 domain SYN_RS11170 PF17805 AsnC-like ligand binding domain SYN_RS11175 PF00202 Aminotransferase class-III SYN_RS11180 PF16363 GDP-mannose 4,6 dehydratase SYN_RS11185 PF01370 NAD dependent epimerase/dehydratase family SYN_RS11200 PF00119 ATP synthase A chain SYN_RS11205 PF01926 50S ribosome-binding GTPase SYN_RS11210 PF00072 Response regulator receiver domain SYN_RS11210 PF00158 Sigma-54 interaction domain SYN_RS11210 PF02954 Bacterial regulatory protein, Fis family SYN_RS11215 PF00578 AhpC/TSA family SYN_RS11225 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA SYN_RS11230 PF01455 HupF/HypC family SYN_RS11235 PF01924 Hydrogenase formation hypA family SYN_RS11240 PF02492 CobW/HypB/UreG, nucleotide-binding domain SYN_RS11245 PF07503 HypF finger SYN_RS11245 PF01300 Telomere recombination SYN_RS11245 PF00708 Acylphosphatase SYN_RS11245 PF17788 HypF Kae1-like domain SYN_RS11250 PF02769 AIR synthase related protein, C-terminal domain SYN_RS11250 PF00586 AIR synthase related protein, N-terminal domain SYN_RS11255 PF00384 Molybdopterin oxidoreductase SYN_RS11255 PF01568 Molydopterin dinucleotide binding domain SYN_RS11255 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SYN_RS11260 PF01568 Molydopterin dinucleotide binding domain SYN_RS11260 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SYN_RS11260 PF00384 Molybdopterin oxidoreductase SYN_RS11265 PF09163 Formate dehydrogenase N, transmembrane SYN_RS11265 PF13247 4Fe-4S dicluster domain SYN_RS11275 PF07992 Pyridine nucleotide-disulphide oxidoreductase SYN_RS11275 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster SYN_RS11280 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B SYN_RS11280 PF00175 Oxidoreductase NAD-binding domain SYN_RS11280 PF00970 Oxidoreductase FAD-binding domain SYN_RS11285 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SYN_RS11290 PF17757 UvrB interaction domain SYN_RS11290 PF04851 Type III restriction enzyme, res subunit SYN_RS11290 PF02151 UvrB/uvrC motif SYN_RS11290 PF12344 Ultra-violet resistance protein B SYN_RS11290 PF00271 Helicase conserved C-terminal domain SYN_RS11295 PF00005 ABC transporter SYN_RS11300 PF12146 Serine aminopeptidase, S33 SYN_RS11305 PF00132 Bacterial transferase hexapeptide (six repeats) SYN_RS11325 PF02811 PHP domain SYN_RS11390 PF03600 Citrate transporter SYN_RS11410 PF00313 'Cold-shock' DNA-binding domain SYN_RS11430 PF07311 Dodecin SYN_RS11450 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg SYN_RS11450 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase SYN_RS11450 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II SYN_RS11455 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SYN_RS11465 PF00549 CoA-ligase SYN_RS11465 PF08442 ATP-grasp domain SYN_RS11470 PF02629 CoA binding domain SYN_RS11470 PF00549 CoA-ligase SYN_RS11535 PF13380 CoA binding domain SYN_RS11550 PF02915 Rubrerythrin SYN_RS11560 PF03471 Transporter associated domain SYN_RS11560 PF00571 CBS domain SYN_RS11560 PF01595 Cyclin M transmembrane N-terminal domain SYN_RS11565 PF03477 ATP cone domain SYN_RS11565 PF00317 Ribonucleotide reductase, all-alpha domain SYN_RS11565 PF02867 Ribonucleotide reductase, barrel domain SYN_RS11570 PF00871 Acetokinase family SYN_RS11575 PF01515 Phosphate acetyl/butaryl transferase SYN_RS11585 PF00696 Amino acid kinase family SYN_RS11595 PF00202 Aminotransferase class-III SYN_RS11610 PF07690 Major Facilitator Superfamily SYN_RS11640 PF13193 AMP-binding enzyme C-terminal domain SYN_RS11640 PF16177 Acetyl-coenzyme A synthetase N-terminus SYN_RS11640 PF00501 AMP-binding enzyme SYN_RS11650 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain SYN_RS11650 PF01077 Nitrite and sulphite reductase 4Fe-4S domain SYN_RS11655 PF03477 ATP cone domain SYN_RS11655 PF00317 Ribonucleotide reductase, all-alpha domain SYN_RS11655 PF02867 Ribonucleotide reductase, barrel domain SYN_RS11665 PF00216 Bacterial DNA-binding protein SYN_RS11670 PF00258 Flavodoxin SYN_RS11705 PF00571 CBS domain SYN_RS11710 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain SYN_RS11710 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase SYN_RS11740 PF00893 Small Multidrug Resistance protein SYN_RS11750 PF02634 FdhD/NarQ family SYN_RS11760 PF00266 Aminotransferase class-V SYN_RS11770 PF00291 Pyridoxal-phosphate dependent enzyme SYN_RS11775 PF01053 Cys/Met metabolism PLP-dependent enzyme SYN_RS11785 PF00132 Bacterial transferase hexapeptide (six repeats) SYN_RS11790 PF02445 Quinolinate synthetase A protein SYN_RS11795 PF05175 Methyltransferase small domain SYN_RS11795 PF17827 PrmC N-terminal domain SYN_RS11800 PF00561 alpha/beta hydrolase fold SYN_RS11805 PF02082 Transcriptional regulator SYN_RS11835 PF14883 Hypothetical glycosyl hydrolase family 13 SYN_RS11835 PF01522 Polysaccharide deacetylase SYN_RS11845 PF00535 Glycosyl transferase family 2 SYN_RS11855 PF00005 ABC transporter SYN_RS11855 PF12704 MacB-like periplasmic core domain SYN_RS11855 PF02687 FtsX-like permease family SYN_RS11860 PF02687 FtsX-like permease family SYN_RS11860 PF12704 MacB-like periplasmic core domain SYN_RS11860 PF00005 ABC transporter SYN_RS11865 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SYN_RS11870 PF02321 Outer membrane efflux protein SYN_RS11880 PF16658 Class II release factor RF3, C-terminal domain SYN_RS11880 PF00009 Elongation factor Tu GTP binding domain SYN_RS11880 PF03144 Elongation factor Tu domain 2 SYN_RS11890 PF00939 Sodium:sulfate symporter transmembrane region SYN_RS11900 PF00857 Isochorismatase family SYN_RS11905 PF01226 Formate/nitrite transporter SYN_RS11930 PF14535 AMP-binding enzyme C-terminal domain SYN_RS11930 PF00501 AMP-binding enzyme SYN_RS11940 PF02954 Bacterial regulatory protein, Fis family SYN_RS11940 PF00158 Sigma-54 interaction domain SYN_RS11940 PF13426 PAS domain SYN_RS11965 PF10609 NUBPL iron-transfer P-loop NTPase SYN_RS11975 PF10609 NUBPL iron-transfer P-loop NTPase SYN_RS11980 PF01862 Pyruvoyl-dependent arginine decarboxylase (PvlArgDC) SYN_RS11990 PF01106 NifU-like domain SYN_RS11990 PF04324 BFD-like [2Fe-2S] binding domain SYN_RS11990 PF01592 NifU-like N terminal domain SYN_RS11995 PF00158 Sigma-54 interaction domain SYN_RS11995 PF00072 Response regulator receiver domain SYN_RS11995 PF02954 Bacterial regulatory protein, Fis family SYN_RS12025 PF18389 TrmO C-terminal domain SYN_RS12025 PF01980 tRNA-methyltransferase O SYN_RS12035 PF04055 Radical SAM superfamily SYN_RS12035 PF01926 50S ribosome-binding GTPase SYN_RS12035 PF01018 GTP1/OBG SYN_RS12060 PF01565 FAD binding domain SYN_RS12060 PF02913 FAD linked oxidases, C-terminal domain SYN_RS12065 PF02754 Cysteine-rich domain SYN_RS12065 PF13183 4Fe-4S dicluster domain SYN_RS12070 PF00155 Aminotransferase class I and II SYN_RS12075 PF13847 Methyltransferase domain SYN_RS12075 PF03551 Transcriptional regulator PadR-like family SYN_RS12100 PF00528 Binding-protein-dependent transport system inner membrane component SYN_RS12105 PF08402 TOBE domain SYN_RS12105 PF00005 ABC transporter SYN_RS12115 PF10609 NUBPL iron-transfer P-loop NTPase SYN_RS12120 PF01925 Sulfite exporter TauE/SafE SYN_RS12125 PF07687 Peptidase dimerisation domain SYN_RS12125 PF01546 Peptidase family M20/M25/M40 SYN_RS12130 PF00258 Flavodoxin SYN_RS12150 PF00180 Isocitrate/isopropylmalate dehydrogenase SYN_RS12155 PF08502 LeuA allosteric (dimerisation) domain SYN_RS12155 PF00682 HMGL-like SYN_RS12160 PF00330 Aconitase family (aconitate hydratase) SYN_RS12165 PF00694 Aconitase C-terminal domain SYN_RS12170 PF01137 RNA 3'-terminal phosphate cyclase SYN_RS12170 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain SYN_RS12190 PF02607 B12 binding domain SYN_RS12190 PF02965 Vitamin B12 dependent methionine synthase, activation domain SYN_RS12190 PF02310 B12 binding domain SYN_RS12190 PF00809 Pterin binding enzyme SYN_RS12190 PF02574 Homocysteine S-methyltransferase SYN_RS12195 PF00156 Phosphoribosyl transferase domain SYN_RS12200 PF01416 tRNA pseudouridine synthase SYN_RS12205 PF01612 3'-5' exonuclease SYN_RS12205 PF00570 HRDC domain SYN_RS12210 PF00155 Aminotransferase class I and II SYN_RS12240 PF13807 G-rich domain on putative tyrosine kinase SYN_RS12240 PF02706 Chain length determinant protein SYN_RS12240 PF13614 AAA domain SYN_RS12250 PF08681 Protein of unknown function (DUF1778) SYN_RS12260 PF06082 Exopolysaccharide biosynthesis protein YbjH SYN_RS12265 PF02719 Polysaccharide biosynthesis protein SYN_RS12270 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family SYN_RS12275 PF00132 Bacterial transferase hexapeptide (six repeats) SYN_RS12275 PF12464 Maltose acetyltransferase SYN_RS12280 PF02397 Bacterial sugar transferase SYN_RS12295 PF02350 UDP-N-acetylglucosamine 2-epimerase SYN_RS12300 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SYN_RS12300 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SYN_RS12320 PF13537 Glutamine amidotransferase domain SYN_RS12320 PF00733 Asparagine synthase SYN_RS12325 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SYN_RS12325 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SYN_RS12335 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain SYN_RS12335 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain SYN_RS12335 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain SYN_RS12345 PF00483 Nucleotidyl transferase SYN_RS12345 PF01050 Mannose-6-phosphate isomerase SYN_RS12355 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family SYN_RS12360 PF02719 Polysaccharide biosynthesis protein SYN_RS12365 PF00953 Glycosyl transferase family 4 SYN_RS12370 PF13460 NAD(P)H-binding SYN_RS12375 PF00534 Glycosyl transferases group 1 SYN_RS12375 PF13439 Glycosyltransferase Family 4 SYN_RS12380 PF13537 Glutamine amidotransferase domain SYN_RS12380 PF00733 Asparagine synthase SYN_RS12385 PF00535 Glycosyl transferase family 2 SYN_RS12390 PF01531 Glycosyl transferase family 11 SYN_RS12400 PF01370 NAD dependent epimerase/dehydratase family SYN_RS12405 PF00535 Glycosyl transferase family 2 SYN_RS12425 PF14524 Wzt C-terminal domain SYN_RS12425 PF00005 ABC transporter SYN_RS12435 PF04989 Cephalosporin hydroxylase SYN_RS12445 PF01370 NAD dependent epimerase/dehydratase family SYN_RS12450 PF08421 Putative zinc binding domain SYN_RS12450 PF08484 C-methyltransferase C-terminal domain SYN_RS12455 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase SYN_RS12460 PF00483 Nucleotidyl transferase SYN_RS12465 PF16363 GDP-mannose 4,6 dehydratase SYN_RS12470 PF00483 Nucleotidyl transferase SYN_RS12485 PF13193 AMP-binding enzyme C-terminal domain SYN_RS12485 PF00501 AMP-binding enzyme SYN_RS12490 PF02803 Thiolase, C-terminal domain SYN_RS12490 PF00108 Thiolase, N-terminal domain SYN_RS12495 PF01676 Metalloenzyme superfamily SYN_RS12495 PF10143 2,3-bisphosphoglycerate-independent phosphoglycerate mutase SYN_RS12500 PF00501 AMP-binding enzyme SYN_RS12500 PF13193 AMP-binding enzyme C-terminal domain SYN_RS12510 PF02754 Cysteine-rich domain SYN_RS12510 PF02665 Nitrate reductase gamma subunit SYN_RS12510 PF13183 4Fe-4S dicluster domain SYN_RS12515 PF01012 Electron transfer flavoprotein domain SYN_RS12515 PF00766 Electron transfer flavoprotein FAD-binding domain SYN_RS12520 PF01012 Electron transfer flavoprotein domain SYN_RS12525 PF00501 AMP-binding enzyme SYN_RS12525 PF16177 Acetyl-coenzyme A synthetase N-terminus SYN_RS12525 PF13193 AMP-binding enzyme C-terminal domain SYN_RS12540 PF13167 GTP-binding GTPase N-terminal SYN_RS12540 PF01926 50S ribosome-binding GTPase SYN_RS12540 PF16360 GTP-binding GTPase Middle Region SYN_RS12545 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) SYN_RS12545 PF02390 Putative methyltransferase SYN_RS12550 PF00834 Ribulose-phosphate 3 epimerase family SYN_RS12565 PF03641 Possible lysine decarboxylase SYN_RS12570 PF01165 Ribosomal protein S21 SYN_RS12575 PF01597 Glycine cleavage H-protein SYN_RS12580 PF01321 Creatinase/Prolidase N-terminal domain SYN_RS12580 PF00557 Metallopeptidase family M24 SYN_RS12595 PF03958 Bacterial type II/III secretion system short domain SYN_RS12595 PF00263 Bacterial type II and III secretion system protein SYN_RS12595 PF07660 Secretin and TonB N terminus short domain SYN_RS12595 PF11741 AMIN domain SYN_RS12615 PF11104 Type IV pilus assembly protein PilM; SYN_RS12620 PF04977 Septum formation initiator SYN_RS12630 PF00692 dUTPase SYN_RS12635 PF00575 S1 RNA binding domain SYN_RS12635 PF03725 3' exoribonuclease family, domain 2 SYN_RS12635 PF01138 3' exoribonuclease family, domain 1 SYN_RS12635 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain SYN_RS12635 PF00013 KH domain SYN_RS12640 PF00312 Ribosomal protein S15 SYN_RS12645 PF16198 tRNA pseudouridylate synthase B C-terminal domain SYN_RS12645 PF01509 TruB family pseudouridylate synthase (N terminal domain) SYN_RS12650 PF01368 DHH family SYN_RS12650 PF02272 DHHA1 domain SYN_RS12655 PF02033 Ribosome-binding factor A SYN_RS12660 PF04456 Protein of unknown function (DUF503) SYN_RS12665 PF11987 Translation-initiation factor 2 SYN_RS12665 PF00009 Elongation factor Tu GTP binding domain SYN_RS12665 PF04760 Translation initiation factor IF-2, N-terminal region SYN_RS12670 PF13184 NusA-like KH domain SYN_RS12670 PF08529 NusA N-terminal domain SYN_RS12670 PF00575 S1 RNA binding domain SYN_RS12675 PF17384 RimP C-terminal SH3 domain SYN_RS12675 PF02576 RimP N-terminal domain SYN_RS12685 PF00815 Histidinol dehydrogenase SYN_RS12690 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SYN_RS12695 PF05175 Methyltransferase small domain SYN_RS12695 PF17827 PrmC N-terminal domain SYN_RS12700 PF00472 RF-1 domain SYN_RS12700 PF03462 PCRF domain SYN_RS12705 PF01197 Ribosomal protein L31 SYN_RS12710 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SYN_RS12710 PF07498 Rho termination factor, N-terminal domain SYN_RS12710 PF07497 Rho termination factor, RNA-binding domain SYN_RS12715 PF02578 Multi-copper polyphenol oxidoreductase laccase SYN_RS12720 PF00849 RNA pseudouridylate synthase SYN_RS12725 PF12390 Selenocysteine synthase N terminal SYN_RS12725 PF03841 L-seryl-tRNA selenium transferase SYN_RS12730 PF06969 HemN C-terminal domain SYN_RS12730 PF04055 Radical SAM superfamily SYN_RS12740 PF00753 Metallo-beta-lactamase superfamily SYN_RS12740 PF12706 Beta-lactamase superfamily domain SYN_RS12745 PF10776 Protein of unknown function (DUF2600) SYN_RS12755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SYN_RS12755 PF00512 His Kinase A (phospho-acceptor) domain SYN_RS12760 PF02954 Bacterial regulatory protein, Fis family SYN_RS12760 PF00072 Response regulator receiver domain SYN_RS12760 PF00158 Sigma-54 interaction domain SYN_RS12765 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SYN_RS12765 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain SYN_RS12780 PF04015 Domain of unknown function (DUF362) SYN_RS12785 PF01042 Endoribonuclease L-PSP SYN_RS12790 PF11412 Disulphide bond corrector protein DsbC SYN_RS12790 PF02683 Cytochrome C biogenesis protein transmembrane region SYN_RS12790 PF00085 Thioredoxin SYN_RS12800 PF08534 Redoxin SYN_RS12810 PF02110 Hydroxyethylthiazole kinase family SYN_RS12815 PF02581 Thiamine monophosphate synthase SYN_RS12830 PF11897 Protein of unknown function (DUF3417) SYN_RS12830 PF00343 Carbohydrate phosphorylase SYN_RS12835 PF01209 ubiE/COQ5 methyltransferase family SYN_RS12840 PF00128 Alpha amylase, catalytic domain SYN_RS12840 PF16657 Maltogenic Amylase, C-terminal domain SYN_RS12845 PF01435 Peptidase family M48 SYN_RS12855 PF00075 RNase H SYN_RS12865 PF03205 Molybdopterin guanine dinucleotide synthesis protein B SYN_RS12880 PF14791 DNA polymerase beta thumb SYN_RS12880 PF14716 Helix-hairpin-helix domain SYN_RS12880 PF02811 PHP domain SYN_RS12890 PF03840 Preprotein translocase SecG subunit SYN_RS12900 PF09827 CRISPR associated protein Cas2 SYN_RS12905 PF01867 CRISPR associated protein Cas1 SYN_RS12940 PF00872 Transposase, Mutator family SYN_RS12955 PF00753 Metallo-beta-lactamase superfamily SYN_RS12965 PF00403 Heavy-metal-associated domain SYN_RS12970 PF13426 PAS domain SYN_RS12970 PF00072 Response regulator receiver domain SYN_RS12970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SYN_RS12975 PF00072 Response regulator receiver domain SYN_RS12975 PF00486 Transcriptional regulatory protein, C terminal SYN_RS12980 PF00881 Nitroreductase family SYN_RS12985 PF00857 Isochorismatase family SYN_RS13000 PF01980 tRNA-methyltransferase O SYN_RS13005 PF13478 XdhC Rossmann domain SYN_RS13005 PF02625 XdhC and CoxI family SYN_RS13020 PF00593 TonB dependent receptor SYN_RS13020 PF07660 Secretin and TonB N terminus short domain SYN_RS13020 PF07715 TonB-dependent Receptor Plug Domain SYN_RS13030 PF13649 Methyltransferase domain SYN_RS13035 PF01497 Periplasmic binding protein SYN_RS13040 PF02472 Biopolymer transport protein ExbD/TolR SYN_RS13045 PF01618 MotA/TolQ/ExbB proton channel family SYN_RS13050 PF00005 ABC transporter SYN_RS13055 PF01032 FecCD transport family SYN_RS13060 PF01497 Periplasmic binding protein SYN_RS13065 PF08241 Methyltransferase domain SYN_RS13095 PF01389 OmpA-like transmembrane domain SYN_RS13095 PF00691 OmpA family SYN_RS13105 PF01966 HD domain SYN_RS13105 PF13286 Phosphohydrolase-associated domain SYN_RS13120 PF02446 4-alpha-glucanotransferase SYN_RS13125 PF00266 Aminotransferase class-V SYN_RS13130 PF01206 Sulfurtransferase TusA SYN_RS13135 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP SYN_RS13155 PF00072 Response regulator receiver domain SYN_RS13160 PF00072 Response regulator receiver domain SYN_RS13160 PF00990 Diguanylate cyclase, GGDEF domain SYN_RS13165 PF02080 TrkA-C domain SYN_RS13165 PF00999 Sodium/hydrogen exchanger family SYN_RS13165 PF03471 Transporter associated domain SYN_RS13175 PF02254 TrkA-N domain SYN_RS13175 PF00999 Sodium/hydrogen exchanger family SYN_RS13195 PF00535 Glycosyl transferase family 2 SYN_RS13200 PF13660 Domain of unknown function (DUF4147) SYN_RS13200 PF05161 MOFRL family SYN_RS13215 PF00690 Cation transporter/ATPase, N-terminus SYN_RS13215 PF00689 Cation transporting ATPase, C-terminus SYN_RS13220 PF04055 Radical SAM superfamily SYN_RS13220 PF12544 Lysine-2,3-aminomutase SYN_RS13230 PF13406 Transglycosylase SLT domain SYN_RS13235 PF05552 Conserved TM helix SYN_RS13240 PF00128 Alpha amylase, catalytic domain SYN_RS13245 PF00924 Mechanosensitive ion channel SYN_RS13250 PF00982 Glycosyltransferase family 20 SYN_RS13255 PF02358 Trehalose-phosphatase SYN_RS13260 PF00534 Glycosyl transferases group 1 SYN_RS13275 PF01551 Peptidase family M23 SYN_RS13275 PF08525 Opacity-associated protein A N-terminal motif SYN_RS13275 PF01476 LysM domain SYN_RS13300 PF02254 TrkA-N domain SYN_RS13300 PF02080 TrkA-C domain SYN_RS13305 PF02386 Cation transport protein SYN_RS13310 PF02335 Cytochrome c552 SYN_RS13320 PF03063 Prismane/CO dehydrogenase family SYN_RS13345 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SYN_RS13350 PF00005 ABC transporter SYN_RS13355 PF00005 ABC transporter SYN_RS13400 PF00313 'Cold-shock' DNA-binding domain SYN_RS13405 PF00270 DEAD/DEAH box helicase SYN_RS13405 PF00271 Helicase conserved C-terminal domain SYN_RS13425 PF02906 Iron only hydrogenase large subunit, C-terminal domain SYN_RS13425 PF00037 4Fe-4S binding domain SYN_RS13425 PF02256 Iron hydrogenase small subunit SYN_RS13425 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region SYN_RS13430 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region SYN_RS13430 PF00037 4Fe-4S binding domain SYN_RS13430 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit SYN_RS13445 PF05430 S-adenosyl-L-methionine-dependent methyltransferase SYN_RS13445 PF01266 FAD dependent oxidoreductase SYN_RS13450 PF01266 FAD dependent oxidoreductase SYN_RS13450 PF16901 C-terminal domain of alpha-glycerophosphate oxidase SYN_RS13455 PF02754 Cysteine-rich domain SYN_RS13455 PF13183 4Fe-4S dicluster domain SYN_RS13475 PF13193 AMP-binding enzyme C-terminal domain SYN_RS13475 PF00501 AMP-binding enzyme SYN_RS13480 PF00440 Bacterial regulatory proteins, tetR family SYN_RS13540 PF17243 POTRA domain TamA domain 1 SYN_RS13540 PF01103 Surface antigen SYN_RS13550 PF00378 Enoyl-CoA hydratase/isomerase SYN_RS13555 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SYN_RS13555 PF16582 Middle domain of thiamine pyrophosphate SYN_RS13555 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SYN_RS13560 PF00425 chorismate binding enzyme SYN_RS13565 PF01475 Ferric uptake regulator family SYN_RS13570 PF06628 Catalase-related immune-responsive SYN_RS13570 PF00199 Catalase SYN_RS13575 PF02673 Bacitracin resistance protein BacA SYN_RS13580 PF04371 Porphyromonas-type peptidyl-arginine deiminase SYN_RS13590 PF00535 Glycosyl transferase family 2 SYN_RS13620 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain SYN_RS13620 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain SYN_RS13625 PF06463 Molybdenum Cofactor Synthesis C SYN_RS13625 PF04055 Radical SAM superfamily SYN_RS13665 PF13847 Methyltransferase domain SYN_RS13670 PF01869 BadF/BadG/BcrA/BcrD ATPase family SYN_RS13675 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component SYN_RS13680 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component SYN_RS13685 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component SYN_RS13690 PF00005 ABC transporter SYN_RS13695 PF00528 Binding-protein-dependent transport system inner membrane component SYN_RS13710 PF09335 SNARE associated Golgi protein SYN_RS13725 PF01726 LexA DNA binding domain SYN_RS13725 PF00717 Peptidase S24-like SYN_RS13755 PF13237 4Fe-4S dicluster domain SYN_RS13770 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ SYN_RS13775 PF01022 Bacterial regulatory protein, arsR family SYN_RS13805 PF01758 Sodium Bile acid symporter family SYN_RS13845 PF13673 Acetyltransferase (GNAT) domain SYN_RS13845 PF13302 Acetyltransferase (GNAT) domain SYN_RS13845 PF03352 Methyladenine glycosylase SYN_RS13845 PF00117 Glutamine amidotransferase class-I SYN_RS13845 PF00958 GMP synthase C terminal domain SYN_RS13850 PF02190 ATP-dependent protease La (LON) substrate-binding domain SYN_RS13850 PF00004 ATPase family associated with various cellular activities (AAA) SYN_RS13850 PF05362 Lon protease (S16) C-terminal proteolytic domain SYN_RS13860 PF00583 Acetyltransferase (GNAT) family SYN_RS13865 PF01546 Peptidase family M20/M25/M40 SYN_RS13865 PF07687 Peptidase dimerisation domain SYN_RS13875 PF02163 Peptidase family M50 SYN_RS13875 PF00571 CBS domain SYN_RS13895 PF00753 Metallo-beta-lactamase superfamily SYN_RS13905 PF01565 FAD binding domain SYN_RS13905 PF02913 FAD linked oxidases, C-terminal domain SYN_RS13915 PF00582 Universal stress protein family SYN_RS13925 PF13419 Haloacid dehalogenase-like hydrolase SYN_RS13930 PF01008 Initiation factor 2 subunit family SYN_RS13935 PF02637 GatB domain SYN_RS13935 PF02934 GatB/GatE catalytic domain SYN_RS13940 PF01425 Amidase SYN_RS13945 PF02686 Glu-tRNAGln amidotransferase C subunit SYN_RS13950 PF02416 mttA/Hcf106 family SYN_RS13955 PF00902 Sec-independent protein translocase protein (TatC) SYN_RS13960 PF17092 Penicillin-binding protein OB-like domain SYN_RS13960 PF00912 Transglycosylase SYN_RS13960 PF00905 Penicillin binding protein transpeptidase domain SYN_RS13965 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SYN_RS13965 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SYN_RS13965 PF00205 Thiamine pyrophosphate enzyme, central domain SYN_RS13970 PF01842 ACT domain SYN_RS13970 PF10369 Small subunit of acetolactate synthase SYN_RS13975 PF00205 Thiamine pyrophosphate enzyme, central domain SYN_RS13975 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SYN_RS13975 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SYN_RS13985 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain SYN_RS13985 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain SYN_RS13990 PF00920 Dehydratase family SYN_RS13995 PF13180 PDZ domain SYN_RS13995 PF17820 PDZ domain SYN_RS14000 PF00730 HhH-GPD superfamily base excision DNA repair protein SYN_RS14000 PF10576 Iron-sulfur binding domain of endonuclease III SYN_RS14010 PF00158 Sigma-54 interaction domain SYN_RS14010 PF00072 Response regulator receiver domain SYN_RS14010 PF02954 Bacterial regulatory protein, Fis family SYN_RS14020 PF00698 Acyl transferase domain SYN_RS14025 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SYN_RS14025 PF02770 Acyl-CoA dehydrogenase, middle domain SYN_RS14025 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SYN_RS14030 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III SYN_RS14030 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal SYN_RS14035 PF07977 FabA-like domain SYN_RS14045 PF07977 FabA-like domain SYN_RS14050 PF00109 Beta-ketoacyl synthase, N-terminal domain SYN_RS14050 PF02801 Beta-ketoacyl synthase, C-terminal domain SYN_RS14055 PF00550 Phosphopantetheine attachment site SYN_RS14085 PF01174 SNO glutamine amidotransferase family SYN_RS14090 PF01680 SOR/SNZ family SYN_RS14095 PF00977 Histidine biosynthesis protein SYN_RS14100 PF00117 Glutamine amidotransferase class-I SYN_RS14110 PF02803 Thiolase, C-terminal domain SYN_RS14110 PF00108 Thiolase, N-terminal domain SYN_RS14130 PF02634 FdhD/NarQ family SYN_RS14135 PF02634 FdhD/NarQ family SYN_RS14150 PF00384 Molybdopterin oxidoreductase SYN_RS14150 PF01568 Molydopterin dinucleotide binding domain SYN_RS14160 PF02424 ApbE family SYN_RS14165 PF00005 ABC transporter SYN_RS14170 PF01061 ABC-2 type transporter SYN_RS14175 PF13237 4Fe-4S dicluster domain SYN_RS14175 PF13375 RnfC Barrel sandwich hybrid domain SYN_RS14175 PF10531 SLBB domain SYN_RS14175 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit SYN_RS14180 PF03116 NQR2, RnfD, RnfE family SYN_RS14185 PF04205 FMN-binding domain SYN_RS14190 PF02508 Rnf-Nqr subunit, membrane protein SYN_RS14205 PF13542 Helix-turn-helix domain of transposase family ISL3 SYN_RS14205 PF01610 Transposase SYN_RS14205 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 SYN_RS14210 PF08240 Alcohol dehydrogenase GroES-like domain SYN_RS14210 PF00107 Zinc-binding dehydrogenase SYN_RS14215 PF00378 Enoyl-CoA hydratase/isomerase SYN_RS14220 PF00378 Enoyl-CoA hydratase/isomerase SYN_RS14225 PF00557 Metallopeptidase family M24 SYN_RS14225 PF05195 Aminopeptidase P, N-terminal domain SYN_RS14230 PF16199 Radical_SAM C-terminal domain SYN_RS14230 PF04055 Radical SAM superfamily SYN_RS14235 PF13932 GidA associated domain SYN_RS14235 PF01134 Glucose inhibited division protein A SYN_RS14240 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SYN_RS14240 PF00384 Molybdopterin oxidoreductase SYN_RS14240 PF01568 Molydopterin dinucleotide binding domain SYN_RS14240 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region SYN_RS14245 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit SYN_RS14245 PF00037 4Fe-4S binding domain SYN_RS14245 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region SYN_RS14265 PF01266 FAD dependent oxidoreductase SYN_RS14265 PF16901 C-terminal domain of alpha-glycerophosphate oxidase SYN_RS14270 PF02754 Cysteine-rich domain SYN_RS14270 PF13183 4Fe-4S dicluster domain SYN_RS14280 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 SYN_RS14280 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain SYN_RS14285 PF00939 Sodium:sulfate symporter transmembrane region SYN_RS14290 PF00501 AMP-binding enzyme SYN_RS14290 PF13193 AMP-binding enzyme C-terminal domain SYN_RS14295 PF13542 Helix-turn-helix domain of transposase family ISL3 SYN_RS14295 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 SYN_RS14295 PF01610 Transposase SYN_RS14300 PF13426 PAS domain SYN_RS14300 PF13188 PAS domain SYN_RS14300 PF00989 PAS fold SYN_RS14300 PF00512 His Kinase A (phospho-acceptor) domain SYN_RS14300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SYN_RS14305 PF00158 Sigma-54 interaction domain SYN_RS14305 PF00072 Response regulator receiver domain SYN_RS14305 PF02954 Bacterial regulatory protein, Fis family SYN_RS14310 PF02954 Bacterial regulatory protein, Fis family SYN_RS14310 PF01590 GAF domain SYN_RS14310 PF00158 Sigma-54 interaction domain SYN_RS14320 PF13187 4Fe-4S dicluster domain SYN_RS14320 PF01645 Conserved region in glutamate synthase SYN_RS14325 PF07992 Pyridine nucleotide-disulphide oxidoreductase SYN_RS14325 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster SYN_RS14330 PF03951 Glutamine synthetase, beta-Grasp domain SYN_RS14330 PF00120 Glutamine synthetase, catalytic domain SYN_RS14335 PF00117 Glutamine amidotransferase class-I SYN_RS14335 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain SYN_RS14340 PF00117 Glutamine amidotransferase class-I SYN_RS14340 PF00958 GMP synthase C terminal domain SYN_RS14345 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain SYN_RS14345 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SYN_RS14345 PF02142 MGS-like domain SYN_RS14350 PF13537 Glutamine amidotransferase domain SYN_RS14350 PF00156 Phosphoribosyl transferase domain SYN_RS14365 PF00149 Calcineurin-like phosphoesterase SYN_RS14365 PF10518 TAT (twin-arginine translocation) pathway signal sequence SYN_RS14395 PF00120 Glutamine synthetase, catalytic domain SYN_RS14395 PF12437 Glutamine synthetase type III N terminal SYN_RS14395 PF18318 Glutamine synthetase C-terminal domain SYN_RS14410 PF02525 Flavodoxin-like fold SYN_RS14415 PF00378 Enoyl-CoA hydratase/isomerase SYN_RS14425 PF00343 Carbohydrate phosphorylase SYN_RS14435 PF01740 STAS domain SYN_RS14450 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) SYN_RS14450 PF00672 HAMP domain SYN_RS14450 PF00072 Response regulator receiver domain SYN_RS14450 PF01627 Hpt domain SYN_RS14450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SYN_RS14450 PF00512 His Kinase A (phospho-acceptor) domain SYN_RS14455 PF16916 Dimerisation domain of Zinc Transporter SYN_RS14455 PF01545 Cation efflux family SYN_RS14465 PF01177 Asp/Glu/Hydantoin racemase SYN_RS14470 PF10672 S-adenosylmethionine-dependent methyltransferase SYN_RS14470 PF02926 THUMP domain SYN_RS14470 PF01170 Putative RNA methylase family UPF0020 SYN_RS14485 PF01032 FecCD transport family SYN_RS14490 PF00005 ABC transporter SYN_RS14505 PF04055 Radical SAM superfamily SYN_RS14505 PF06968 Biotin and Thiamin Synthesis associated domain SYN_RS14510 PF08279 HTH domain SYN_RS14510 PF03099 Biotin/lipoate A/B protein ligase family SYN_RS14510 PF02237 Biotin protein ligase C terminal domain SYN_RS14515 PF02632 BioY family SYN_RS14520 PF00005 ABC transporter SYN_RS14525 PF02361 Cobalt transport protein SYN_RS14530 PF01594 AI-2E family transporter SYN_RS14575 PF00313 'Cold-shock' DNA-binding domain SYN_RS14580 PF00271 Helicase conserved C-terminal domain SYN_RS14580 PF03880 DbpA RNA binding domain SYN_RS14580 PF00270 DEAD/DEAH box helicase SYN_RS14585 PF01817 Chorismate mutase type II SYN_RS14585 PF00800 Prephenate dehydratase SYN_RS14590 PF00793 DAHP synthetase I family SYN_RS14590 PF18152 DAHP synthase ferredoxin-like domain SYN_RS14620 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SYN_RS14620 PF02874 ATP synthase alpha/beta family, beta-barrel domain SYN_RS14620 PF00306 ATP synthase alpha/beta chain, C terminal domain SYN_RS14625 PF00430 ATP synthase B/B' CF(0) SYN_RS14630 PF00137 ATP synthase subunit C SYN_RS14635 PF00119 ATP synthase A chain SYN_RS14650 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain SYN_RS14690 PF00085 Thioredoxin SYN_RS14695 PF00730 HhH-GPD superfamily base excision DNA repair protein SYN_RS14695 PF00633 Helix-hairpin-helix motif SYN_RS14695 PF14815 NUDIX domain SYN_RS14710 PF07690 Major Facilitator Superfamily SYN_RS14725 PF01515 Phosphate acetyl/butaryl transferase SYN_RS14730 PF01515 Phosphate acetyl/butaryl transferase SYN_RS14740 PF03749 Sugar fermentation stimulation protein RE domain SYN_RS14740 PF17746 SfsA N-terminal OB domain SYN_RS14745 PF00440 Bacterial regulatory proteins, tetR family SYN_RS14745 PF16295 Tetracyclin repressor-like, C-terminal domain SYN_RS14750 PF00529 HlyD membrane-fusion protein of T1SS SYN_RS14750 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SYN_RS14755 PF00873 AcrB/AcrD/AcrF family SYN_RS14760 PF02321 Outer membrane efflux protein SYN_RS14770 PF00176 SNF2 family N-terminal domain SYN_RS14770 PF00271 Helicase conserved C-terminal domain SYN_RS14770 PF12419 SNF2 Helicase protein SYN_RS14775 PF02405 Permease MlaE SYN_RS14780 PF00005 ABC transporter SYN_RS14785 PF02470 MlaD protein SYN_RS14795 PF13533 Biotin-lipoyl like SYN_RS14800 PF00005 ABC transporter SYN_RS14830 PF12801 4Fe-4S binding domain SYN_RS14835 PF02348 Cytidylyltransferase SYN_RS14840 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family SYN_RS14845 PF00588 SpoU rRNA Methylase family SYN_RS14850 PF02527 rRNA small subunit methyltransferase G SYN_RS14855 PF13614 AAA domain SYN_RS14870 PF02556 Preprotein translocase subunit SecB SYN_RS14880 PF08448 PAS fold SYN_RS14880 PF00512 His Kinase A (phospho-acceptor) domain SYN_RS14880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SYN_RS14880 PF13188 PAS domain SYN_RS14880 PF00072 Response regulator receiver domain SYN_RS14890 PF00982 Glycosyltransferase family 20 SYN_RS14900 PF02620 Large ribosomal RNA subunit accumulation protein YceD SYN_RS14905 PF08448 PAS fold SYN_RS14905 PF00512 His Kinase A (phospho-acceptor) domain SYN_RS14905 PF13188 PAS domain SYN_RS14905 PF00072 Response regulator receiver domain SYN_RS14905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SYN_RS14910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SYN_RS14910 PF07730 Histidine kinase SYN_RS14920 PF11871 Domain of unknown function (DUF3391) SYN_RS14920 PF01966 HD domain SYN_RS14930 PF00005 ABC transporter SYN_RS14940 PF02397 Bacterial sugar transferase SYN_RS14945 PF00158 Sigma-54 interaction domain SYN_RS14945 PF01590 GAF domain SYN_RS14945 PF02954 Bacterial regulatory protein, Fis family SYN_RS14950 PF00535 Glycosyl transferase family 2 SYN_RS14955 PF00535 Glycosyl transferase family 2 SYN_RS14955 PF01501 Glycosyl transferase family 8 SYN_RS14960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SYN_RS14960 PF13426 PAS domain SYN_RS14960 PF00072 Response regulator receiver domain SYN_RS14960 PF08448 PAS fold SYN_RS14960 PF00512 His Kinase A (phospho-acceptor) domain SYN_RS14965 PF00072 Response regulator receiver domain SYN_RS14965 PF00512 His Kinase A (phospho-acceptor) domain SYN_RS14965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SYN_RS14965 PF08448 PAS fold SYN_RS14965 PF13426 PAS domain SYN_RS15005 PF01867 CRISPR associated protein Cas1 SYN_RS15015 PF08241 Methyltransferase domain SYN_RS15020 PF03613 PTS system mannose/fructose/sorbose family IID component SYN_RS15025 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SYN_RS15025 PF00672 HAMP domain SYN_RS15025 PF02743 Cache domain SYN_RS15030 PF17284 Spermidine synthase tetramerisation domain SYN_RS15050 PF00158 Sigma-54 interaction domain SYN_RS15050 PF01590 GAF domain SYN_RS15065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SYN_RS15065 PF07730 Histidine kinase SYN_RS15070 PF00293 NUDIX domain SYN_RS15075 PF00483 Nucleotidyl transferase SYN_RS15080 PF00486 Transcriptional regulatory protein, C terminal SYN_RS15080 PF00072 Response regulator receiver domain SYN_RS15095 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg SYN_RS15095 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase SYN_RS15095 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II SYN_RS15100 PF00691 OmpA family SYN_RS15100 PF05736 OprF membrane domain SYN_RS15115 PF01966 HD domain SYN_RS15120 PF00842 Alanine racemase, C-terminal domain SYN_RS15120 PF01168 Alanine racemase, N-terminal domain SYN_RS15135 PF01695 IstB-like ATP binding protein SYN_RS15155 PF01424 R3H domain SYN_RS15155 PF14804 Jag N-terminus SYN_RS15170 PF17202 Single cache domain 3 SYN_RS15170 PF00672 HAMP domain SYN_RS15170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SYN_RS15205 PF03830 PTS system sorbose subfamily IIB component SYN_RS15215 PF00448 SRP54-type protein, GTPase domain SYN_RS15225 PF13181 Tetratricopeptide repeat SYN_RS15225 PF00535 Glycosyl transferase family 2 SYN_RS15230 PF08241 Methyltransferase domain SYN_RS15235 PF01966 HD domain SYN_RS15240 PF01610 Transposase SYN_RS15240 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 SYN_RS15240 PF13542 Helix-turn-helix domain of transposase family ISL3 SYN_RS15250 PF00512 His Kinase A (phospho-acceptor) domain SYN_RS15250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SYN_RS15250 PF00989 PAS fold SYN_RS15250 PF16736 Single Cache-like SYN_RS15295 PF00072 Response regulator receiver domain SYN_RS15295 PF01966 HD domain SYN_RS15300 PF00990 Diguanylate cyclase, GGDEF domain SYN_RS15300 PF00072 Response regulator receiver domain SYN_RS15315 PF02457 DisA bacterial checkpoint controller nucleotide-binding SYN_RS15320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SYN_RS15320 PF00512 His Kinase A (phospho-acceptor) domain SYN_RS15320 PF13426 PAS domain SYN_RS15320 PF00989 PAS fold SYN_RS15320 PF13188 PAS domain SYN_RS15330 PF01250 Ribosomal protein S6 SYN_RS15335 PF00158 Sigma-54 interaction domain SYN_RS15335 PF01590 GAF domain SYN_RS15340 PF01464 Transglycosylase SLT domain SYN_RS15340 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain SYN_RS15385 PF00535 Glycosyl transferase family 2 SYN_RS15390 PF07963 Prokaryotic N-terminal methylation motif SYN_RS15390 PF00114 Pilin (bacterial filament) SYN_RS15400 PF07963 Prokaryotic N-terminal methylation motif SYN_RS15400 PF00114 Pilin (bacterial filament) SYN_RS15410 PF00072 Response regulator receiver domain SYN_RS15410 PF01966 HD domain SYN_RS15415 PF02743 Cache domain SYN_RS15415 PF00672 HAMP domain SYN_RS15415 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SYN_RS15450 PF00535 Glycosyl transferase family 2 SYN_RS15470 PF01327 Polypeptide deformylase SYN_RS15475 PF04216 Protein involved in formate dehydrogenase formation SYN_RS15490 PF00497 Bacterial extracellular solute-binding proteins, family 3 SYN_RS15490 PF00989 PAS fold SYN_RS15490 PF01627 Hpt domain SYN_RS15490 PF00512 His Kinase A (phospho-acceptor) domain SYN_RS15490 PF00072 Response regulator receiver domain SYN_RS15490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SYN_RS15495 PF12697 Alpha/beta hydrolase family SYN_RS15500 PF00501 AMP-binding enzyme SYN_RS15500 PF13193 AMP-binding enzyme C-terminal domain SYN_RS15505 PF00561 alpha/beta hydrolase fold SYN_RS15535 PF00989 PAS fold SYN_RS15535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SYN_RS15535 PF00512 His Kinase A (phospho-acceptor) domain SYN_RS15550 PF02508 Rnf-Nqr subunit, membrane protein SYN_RS15575 PF06827 Zinc finger found in FPG and IleRS SYN_RS15575 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain SYN_RS15575 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain SYN_RS15580 PF00231 ATP synthase