locus-tag class description TF3313_RS00015 PF08299 Bacterial dnaA protein helix-turn-helix TF3313_RS00015 PF00308 Bacterial dnaA protein TF3313_RS00015 PF11638 DnaA N-terminal domain TF3313_RS00025 PF01245 Ribosomal protein L19 TF3313_RS00030 PF00933 Glycosyl hydrolase family 3 N terminal domain TF3313_RS00040 PF01494 FAD binding domain TF3313_RS00045 PF00109 Beta-ketoacyl synthase, N-terminal domain TF3313_RS00045 PF02801 Beta-ketoacyl synthase, C-terminal domain TF3313_RS00060 PF05649 Peptidase family M13 TF3313_RS00060 PF01431 Peptidase family M13 TF3313_RS00075 PF01032 FecCD transport family TF3313_RS00080 PF00005 ABC transporter TF3313_RS00095 PF00175 Oxidoreductase NAD-binding domain TF3313_RS00095 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B TF3313_RS00100 PF01180 Dihydroorotate dehydrogenase TF3313_RS00115 PF02308 MgtC family TF3313_RS00125 PF01416 tRNA pseudouridine synthase TF3313_RS00135 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain TF3313_RS00135 PF07685 CobB/CobQ-like glutamine amidotransferase domain TF3313_RS00140 PF02018 Carbohydrate binding domain TF3313_RS00140 PF02927 Cellulase N-terminal ig-like domain TF3313_RS00140 PF00759 Glycosyl hydrolase family 9 TF3313_RS00140 PF07679 Immunoglobulin I-set domain TF3313_RS00150 PF07715 TonB-dependent Receptor Plug Domain TF3313_RS00150 PF00593 TonB dependent receptor TF3313_RS00165 PF00593 TonB dependent receptor TF3313_RS00165 PF07715 TonB-dependent Receptor Plug Domain TF3313_RS00180 PF00535 Glycosyl transferase family 2 TF3313_RS00190 PF04122 Putative cell wall binding repeat 2 TF3313_RS00190 PF08486 Stage II sporulation protein TF3313_RS00195 PF07690 Major Facilitator Superfamily TF3313_RS00200 PF07075 Protein of unknown function (DUF1343) TF3313_RS00215 PF01380 SIS domain TF3313_RS00290 PF04055 Radical SAM superfamily TF3313_RS00290 PF06463 Molybdenum Cofactor Synthesis C TF3313_RS00320 PF03412 Peptidase C39 family TF3313_RS00320 PF00664 ABC transporter transmembrane region TF3313_RS00320 PF00005 ABC transporter TF3313_RS00340 PF13439 Glycosyltransferase Family 4 TF3313_RS00340 PF00534 Glycosyl transferases group 1 TF3313_RS00400 PF03412 Peptidase C39 family TF3313_RS00400 PF00664 ABC transporter transmembrane region TF3313_RS00400 PF00005 ABC transporter TF3313_RS00435 PF01336 OB-fold nucleic acid binding domain TF3313_RS00435 PF00152 tRNA synthetases class II (D, K and N) TF3313_RS00440 PF00849 RNA pseudouridylate synthase TF3313_RS00440 PF01479 S4 domain TF3313_RS00445 PF00206 Lyase TF3313_RS00445 PF08328 Adenylosuccinate lyase C-terminal TF3313_RS00465 PF00005 ABC transporter TF3313_RS00465 PF00664 ABC transporter transmembrane region TF3313_RS00470 PF00005 ABC transporter TF3313_RS00470 PF00664 ABC transporter transmembrane region TF3313_RS00480 PF03605 Anaerobic c4-dicarboxylate membrane transporter TF3313_RS00490 PF00117 Glutamine amidotransferase class-I TF3313_RS00495 PF00425 chorismate binding enzyme TF3313_RS00505 PF01228 Glycine radical TF3313_RS00505 PF02901 Pyruvate formate lyase-like TF3313_RS00515 PF07690 Major Facilitator Superfamily TF3313_RS00520 PF04055 Radical SAM superfamily TF3313_RS00525 PF00849 RNA pseudouridylate synthase TF3313_RS00530 PF00166 Chaperonin 10 Kd subunit TF3313_RS00535 PF00175 Oxidoreductase NAD-binding domain TF3313_RS00535 PF00970 Oxidoreductase FAD-binding domain TF3313_RS00535 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B TF3313_RS00540 PF07992 Pyridine nucleotide-disulphide oxidoreductase TF3313_RS00540 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster TF3313_RS00545 PF04170 NlpE N-terminal domain TF3313_RS00545 PF17185 NlpE C-terminal OB domain TF3313_RS00550 PF00293 NUDIX domain TF3313_RS00555 PF01741 Large-conductance mechanosensitive channel, MscL TF3313_RS00560 PF06965 Na+/H+ antiporter 1 TF3313_RS00565 PF00072 Response regulator receiver domain TF3313_RS00565 PF04397 LytTr DNA-binding domain TF3313_RS00570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TF3313_RS00570 PF06580 Histidine kinase TF3313_RS00585 PF00005 ABC transporter TF3313_RS00585 PF12704 MacB-like periplasmic core domain TF3313_RS00585 PF02687 FtsX-like permease family TF3313_RS00615 PF00072 Response regulator receiver domain TF3313_RS00615 PF00158 Sigma-54 interaction domain TF3313_RS00615 PF02954 Bacterial regulatory protein, Fis family TF3313_RS00620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TF3313_RS00620 PF00512 His Kinase A (phospho-acceptor) domain TF3313_RS00625 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain TF3313_RS00625 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain TF3313_RS00655 PF00534 Glycosyl transferases group 1 TF3313_RS00655 PF13439 Glycosyltransferase Family 4 TF3313_RS00665 PF00501 AMP-binding enzyme TF3313_RS00665 PF13193 AMP-binding enzyme C-terminal domain TF3313_RS00680 PF01121 Dephospho-CoA kinase TF3313_RS00690 PF02699 Preprotein translocase subunit TF3313_RS00695 PF01029 NusB family TF3313_RS00700 PF00710 Asparaginase, N-terminal TF3313_RS00700 PF17763 Glutaminase/Asparaginase C-terminal domain TF3313_RS00710 PF00722 Glycosyl hydrolases family 16 TF3313_RS00720 PF07715 TonB-dependent Receptor Plug Domain TF3313_RS00720 PF00593 TonB dependent receptor TF3313_RS00740 PF00266 Aminotransferase class-V TF3313_RS00750 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain TF3313_RS00750 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TF3313_RS00750 PF01842 ACT domain TF3313_RS00760 PF13419 Haloacid dehalogenase-like hydrolase TF3313_RS00765 PF04542 Sigma-70 region 2 TF3313_RS00765 PF08281 Sigma-70, region 4 TF3313_RS00835 PF04343 Protein of unknown function, DUF488 TF3313_RS00845 PF12826 Helix-hairpin-helix motif TF3313_RS00845 PF03119 NAD-dependent DNA ligase C4 zinc finger domain TF3313_RS00845 PF03120 NAD-dependent DNA ligase OB-fold domain TF3313_RS00845 PF01653 NAD-dependent DNA ligase adenylation domain TF3313_RS00845 PF00533 BRCA1 C Terminus (BRCT) domain TF3313_RS00855 PF00701 Dihydrodipicolinate synthetase family TF3313_RS00860 PF00596 Class II Aldolase and Adducin N-terminal domain TF3313_RS00865 PF06379 L-rhamnose-proton symport protein (RhaT) TF3313_RS00870 PF06134 L-rhamnose isomerase (RhaA) TF3313_RS00875 PF02782 FGGY family of carbohydrate kinases, C-terminal domain TF3313_RS00875 PF00370 FGGY family of carbohydrate kinases, N-terminal domain TF3313_RS00890 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TF3313_RS00890 PF09180 Prolyl-tRNA synthetase, C-terminal TF3313_RS00890 PF03129 Anticodon binding domain TF3313_RS00895 PF02548 Ketopantoate hydroxymethyltransferase TF3313_RS00905 PF04011 LemA family TF3313_RS00910 PF01435 Peptidase family M48 TF3313_RS00915 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain TF3313_RS00915 PF01411 tRNA synthetases class II (A) TF3313_RS00915 PF02272 DHHA1 domain TF3313_RS00920 PF00162 Phosphoglycerate kinase TF3313_RS00925 PF01554 MatE TF3313_RS00930 PF00677 Lumazine binding domain TF3313_RS00935 PF00365 Phosphofructokinase TF3313_RS00965 PF00226 DnaJ domain TF3313_RS00965 PF01556 DnaJ C terminal domain TF3313_RS00965 PF00684 DnaJ central domain TF3313_RS00970 PF01025 GrpE TF3313_RS00975 PF17820 PDZ domain TF3313_RS00975 PF13180 PDZ domain TF3313_RS00980 PF01713 Smr domain TF3313_RS00980 PF00488 MutS domain V TF3313_RS00990 PF01168 Alanine racemase, N-terminal domain TF3313_RS01000 PF13302 Acetyltransferase (GNAT) domain TF3313_RS01020 PF02559 CarD-like/TRCF domain TF3313_RS01020 PF00270 DEAD/DEAH box helicase TF3313_RS01020 PF00271 Helicase conserved C-terminal domain TF3313_RS01020 PF03461 TRCF domain TF3313_RS01020 PF17757 UvrB interaction domain TF3313_RS01025 PF00441 Acyl-CoA dehydrogenase, C-terminal domain TF3313_RS01025 PF02770 Acyl-CoA dehydrogenase, middle domain TF3313_RS01025 PF02771 Acyl-CoA dehydrogenase, N-terminal domain TF3313_RS01030 PF01012 Electron transfer flavoprotein domain TF3313_RS01030 PF00766 Electron transfer flavoprotein FAD-binding domain TF3313_RS01040 PF01012 Electron transfer flavoprotein domain TF3313_RS01045 PF00793 DAHP synthetase I family TF3313_RS01065 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain TF3313_RS01065 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain TF3313_RS01095 PF00072 Response regulator receiver domain TF3313_RS01095 PF00196 Bacterial regulatory proteins, luxR family TF3313_RS01100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TF3313_RS01100 PF07730 Histidine kinase TF3313_RS01100 PF13185 GAF domain TF3313_RS01100 PF13492 GAF domain TF3313_RS01105 PF13173 AAA domain TF3313_RS01105 PF13635 Domain of unknown function (DUF4143) TF3313_RS01110 PF17761 DUF1016 N-terminal domain TF3313_RS01110 PF06250 YhcG PDDEXK nuclease domain TF3313_RS01135 PF05656 Protein of unknown function (DUF805) TF3313_RS01140 PF07581 The GLUG motif TF3313_RS01140 PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) TF3313_RS01170 PF16363 GDP-mannose 4,6 dehydratase TF3313_RS01175 PF00471 Ribosomal protein L33 TF3313_RS01180 PF00830 Ribosomal L28 family TF3313_RS01205 PF04073 Aminoacyl-tRNA editing domain TF3313_RS01210 PF01048 Phosphorylase superfamily TF3313_RS01230 PF07715 TonB-dependent Receptor Plug Domain TF3313_RS01230 PF00593 TonB dependent receptor TF3313_RS01235 PF07980 SusD family TF3313_RS01235 PF14322 Starch-binding associating with outer membrane TF3313_RS01240 PF16353 Domain of unknown function(DUF4981) TF3313_RS01240 PF00703 Glycosyl hydrolases family 2 TF3313_RS01240 PF02929 Beta galactosidase small chain TF3313_RS01240 PF02836 Glycosyl hydrolases family 2, TIM barrel domain TF3313_RS01240 PF02837 Glycosyl hydrolases family 2, sugar binding domain TF3313_RS01250 PF03956 Lysine exporter LysO TF3313_RS01255 PF00753 Metallo-beta-lactamase superfamily TF3313_RS01260 PF06803 Protein of unknown function (DUF1232) TF3313_RS01265 PF07881 L-fucose isomerase, first N-terminal domain TF3313_RS01265 PF02952 L-fucose isomerase, C-terminal domain TF3313_RS01265 PF07882 L-fucose isomerase, second N-terminal domain TF3313_RS01270 PF07690 Major Facilitator Superfamily TF3313_RS01275 PF01467 Cytidylyltransferase-like TF3313_RS01275 PF00294 pfkB family carbohydrate kinase TF3313_RS01280 PF00483 Nucleotidyl transferase TF3313_RS01285 PF00691 OmpA family TF3313_RS01290 PF01578 Cytochrome C assembly protein TF3313_RS01290 PF05140 ResB-like family TF3313_RS01295 PF00326 Prolyl oligopeptidase family TF3313_RS01295 PF07676 WD40-like Beta Propeller Repeat TF3313_RS01295 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region TF3313_RS01305 PF07971 Glycosyl hydrolase family 92 TF3313_RS01305 PF17678 Glycosyl hydrolase family 92 N-terminal domain TF3313_RS01315 PF01554 MatE TF3313_RS01320 PF02261 Aspartate decarboxylase TF3313_RS01325 PF02569 Pantoate-beta-alanine ligase TF3313_RS01330 PF08323 Starch synthase catalytic domain TF3313_RS01330 PF00534 Glycosyl transferases group 1 TF3313_RS01460 PF10502 Signal peptidase, peptidase S26 TF3313_RS01495 PF10502 Signal peptidase, peptidase S26 TF3313_RS01505 PF00535 Glycosyl transferase family 2 TF3313_RS01510 PF10459 Peptidase S46 TF3313_RS01525 PF05491 RuvB C-terminal winged helix domain TF3313_RS01525 PF17864 RuvB AAA lid domain TF3313_RS01525 PF05496 Holliday junction DNA helicase RuvB P-loop domain TF3313_RS01565 PF00873 AcrB/AcrD/AcrF family TF3313_RS01590 PF03458 UPF0126 domain TF3313_RS01595 PF07715 TonB-dependent Receptor Plug Domain TF3313_RS01595 PF00593 TonB dependent receptor TF3313_RS01605 PF09424 Yqey-like protein TF3313_RS01610 PF00091 Tubulin/FtsZ family, GTPase domain TF3313_RS01610 PF12327 FtsZ family, C-terminal domain TF3313_RS01615 PF02491 SHS2 domain inserted in FTSA TF3313_RS01625 PF08245 Mur ligase middle domain TF3313_RS01625 PF01225 Mur ligase family, catalytic domain TF3313_RS01625 PF02875 Mur ligase family, glutamate ligase domain TF3313_RS01630 PF03033 Glycosyltransferase family 28 N-terminal domain TF3313_RS01630 PF04101 Glycosyltransferase family 28 C-terminal domain TF3313_RS01635 PF01098 Cell cycle protein TF3313_RS01640 PF08245 Mur ligase middle domain TF3313_RS01640 PF02875 Mur ligase family, glutamate ligase domain TF3313_RS01645 PF00953 Glycosyl transferase family 4 TF3313_RS01645 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 TF3313_RS01650 PF02875 Mur ligase family, glutamate ligase domain TF3313_RS01650 PF08245 Mur ligase middle domain TF3313_RS01650 PF01225 Mur ligase family, catalytic domain TF3313_RS01655 PF03717 Penicillin-binding Protein dimerisation domain TF3313_RS01655 PF00905 Penicillin binding protein transpeptidase domain TF3313_RS01665 PF01795 MraW methylase family TF3313_RS01680 PF02502 Ribose/Galactose Isomerase TF3313_RS01685 PF02780 Transketolase, C-terminal domain TF3313_RS01685 PF00456 Transketolase, thiamine diphosphate binding domain TF3313_RS01685 PF02779 Transketolase, pyrimidine binding domain TF3313_RS01690 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain TF3313_RS01690 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain TF3313_RS01695 PF13419 Haloacid dehalogenase-like hydrolase TF3313_RS01735 PF04542 Sigma-70 region 2 TF3313_RS01735 PF08281 Sigma-70, region 4 TF3313_RS01745 PF00834 Ribulose-phosphate 3 epimerase family TF3313_RS01750 PF13567 Domain of unknown function (DUF4131) TF3313_RS01750 PF00753 Metallo-beta-lactamase superfamily TF3313_RS01750 PF03772 Competence protein TF3313_RS01755 PF04539 Sigma-70 region 3 TF3313_RS01755 PF04542 Sigma-70 region 2 TF3313_RS01755 PF00140 Sigma-70 factor, region 1.2 TF3313_RS01755 PF04545 Sigma-70, region 4 TF3313_RS01755 PF03979 Sigma-70 factor, region 1.1 TF3313_RS01760 PF17820 PDZ domain TF3313_RS01760 PF13180 PDZ domain TF3313_RS01785 PF00117 Glutamine amidotransferase class-I TF3313_RS01785 PF00958 GMP synthase C terminal domain TF3313_RS01785 PF02540 NAD synthase TF3313_RS01800 PF01435 Peptidase family M48 TF3313_RS01805 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase TF3313_RS01805 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain TF3313_RS01810 PF01554 MatE TF3313_RS01815 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain TF3313_RS01815 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TF3313_RS01835 PF01523 Putative modulator of DNA gyrase TF3313_RS01845 PF02929 Beta galactosidase small chain TF3313_RS01845 PF16353 Domain of unknown function(DUF4981) TF3313_RS01845 PF00703 Glycosyl hydrolases family 2 TF3313_RS01845 PF02836 Glycosyl hydrolases family 2, TIM barrel domain TF3313_RS01845 PF02837 Glycosyl hydrolases family 2, sugar binding domain TF3313_RS01850 PF00919 Uncharacterized protein family UPF0004 TF3313_RS01850 PF01938 TRAM domain TF3313_RS01850 PF04055 Radical SAM superfamily TF3313_RS01870 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase TF3313_RS01890 PF00005 ABC transporter TF3313_RS01890 PF12704 MacB-like periplasmic core domain TF3313_RS01890 PF02687 FtsX-like permease family TF3313_RS01895 PF00005 ABC transporter TF3313_RS01895 PF02687 FtsX-like permease family TF3313_RS01895 PF12704 MacB-like periplasmic core domain TF3313_RS01900 PF00005 ABC transporter TF3313_RS01910 PF02899 Phage integrase, N-terminal SAM-like domain TF3313_RS01910 PF00589 Phage integrase family TF3313_RS01925 PF01638 HxlR-like helix-turn-helix TF3313_RS01935 PF01965 DJ-1/PfpI family TF3313_RS01950 PF01497 Periplasmic binding protein TF3313_RS01950 PF12833 Helix-turn-helix domain TF3313_RS01955 PF01554 MatE TF3313_RS01975 PF01751 Toprim domain TF3313_RS01975 PF01396 Topoisomerase DNA binding C4 zinc finger TF3313_RS01975 PF01131 DNA topoisomerase TF3313_RS02015 PF02384 N-6 DNA Methylase TF3313_RS02015 PF12161 HsdM N-terminal domain TF3313_RS02020 PF11867 Domain of unknown function (DUF3387) TF3313_RS02020 PF18766 SWI2/SNF2 ATPase TF3313_RS02020 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) TF3313_RS02040 PF00905 Penicillin binding protein transpeptidase domain TF3313_RS02040 PF06832 Penicillin-Binding Protein C-terminus Family TF3313_RS02040 PF00912 Transglycosylase TF3313_RS02045 PF11974 Bacterial alpha-2-macroglobulin MG3 domain TF3313_RS02045 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain TF3313_RS02045 PF07703 Alpha-2-macroglobulin bait region domain TF3313_RS02045 PF00207 Alpha-2-macroglobulin family TF3313_RS02045 PF17962 Bacterial macroglobulin domain 6 TF3313_RS02045 PF01835 MG2 domain TF3313_RS02045 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain TF3313_RS02045 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain TF3313_RS02045 PF07678 A-macroglobulin TED domain TF3313_RS02050 PF00156 Phosphoribosyl transferase domain TF3313_RS02060 PF00206 Lyase TF3313_RS02070 PF13439 Glycosyltransferase Family 4 TF3313_RS02070 PF00534 Glycosyl transferases group 1 TF3313_RS02075 PF01693 Caulimovirus viroplasmin TF3313_RS02085 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase TF3313_RS02095 PF00579 tRNA synthetases class I (W and Y) TF3313_RS02105 PF01926 50S ribosome-binding GTPase TF3313_RS02105 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal TF3313_RS02110 PF07650 KH domain TF3313_RS02110 PF01926 50S ribosome-binding GTPase TF3313_RS02115 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal TF3313_RS02115 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III TF3313_RS02125 PF07971 Glycosyl hydrolase family 92 TF3313_RS02125 PF17678 Glycosyl hydrolase family 92 N-terminal domain TF3313_RS02130 PF00295 Glycosyl hydrolases family 28 TF3313_RS02140 PF02837 Glycosyl hydrolases family 2, sugar binding domain TF3313_RS02150 PF00593 TonB dependent receptor TF3313_RS02150 PF07715 TonB-dependent Receptor Plug Domain TF3313_RS02160 PF00326 Prolyl oligopeptidase family TF3313_RS02160 PF07676 WD40-like Beta Propeller Repeat TF3313_RS02170 PF07715 TonB-dependent Receptor Plug Domain TF3313_RS02170 PF00593 TonB dependent receptor TF3313_RS02200 PF00923 Transaldolase/Fructose-6-phosphate aldolase TF3313_RS02205 PF01926 50S ribosome-binding GTPase TF3313_RS02220 PF00579 tRNA synthetases class I (W and Y) TF3313_RS02235 PF00056 lactate/malate dehydrogenase, NAD binding domain TF3313_RS02235 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain TF3313_RS02240 PF02780 Transketolase, C-terminal domain TF3313_RS02240 PF02779 Transketolase, pyrimidine binding domain TF3313_RS02240 PF13292 1-deoxy-D-xylulose-5-phosphate synthase TF3313_RS02245 PF02080 TrkA-C domain TF3313_RS02245 PF02254 TrkA-N domain TF3313_RS02250 PF02386 Cation transport protein TF3313_RS02260 PF00593 TonB dependent receptor TF3313_RS02260 PF07715 TonB-dependent Receptor Plug Domain TF3313_RS02300 PF01381 Helix-turn-helix TF3313_RS02310 PF07804 HipA-like C-terminal domain TF3313_RS02315 PF10396 GTP-binding protein TrmE N-terminus TF3313_RS02315 PF12631 MnmE helical domain TF3313_RS02315 PF01926 50S ribosome-binding GTPase TF3313_RS02325 PF12344 Ultra-violet resistance protein B TF3313_RS02325 PF17757 UvrB interaction domain TF3313_RS02325 PF00271 Helicase conserved C-terminal domain TF3313_RS02325 PF04851 Type III restriction enzyme, res subunit TF3313_RS02340 PF03932 CutC family TF3313_RS02345 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain TF3313_RS02345 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain TF3313_RS02345 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain TF3313_RS02360 PF00534 Glycosyl transferases group 1 TF3313_RS02360 PF13439 Glycosyltransferase Family 4 TF3313_RS02365 PF13186 Iron-sulfur cluster-binding domain TF3313_RS02365 PF04055 Radical SAM superfamily TF3313_RS02380 PF04991 LicD family TF3313_RS02390 PF03009 Glycerophosphoryl diester phosphodiesterase family TF3313_RS02395 PF13614 AAA domain TF3313_RS02395 PF13807 G-rich domain on putative tyrosine kinase TF3313_RS02395 PF02706 Chain length determinant protein TF3313_RS02405 PF00137 ATP synthase subunit C TF3313_RS02420 PF02874 ATP synthase alpha/beta family, beta-barrel domain TF3313_RS02420 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TF3313_RS02425 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TF3313_RS02425 PF02874 ATP synthase alpha/beta family, beta-barrel domain TF3313_RS02425 PF16886 ATPsynthase alpha/beta subunit N-term extension TF3313_RS02440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TF3313_RS02440 PF07730 Histidine kinase TF3313_RS02445 PF00196 Bacterial regulatory proteins, luxR family TF3313_RS02445 PF00072 Response regulator receiver domain TF3313_RS02455 PF04480 Protein of unknown function (DUF559) TF3313_RS02500 PF01026 TatD related DNase TF3313_RS02505 PF00825 Ribonuclease P TF3313_RS02520 PF00890 FAD binding domain TF3313_RS02520 PF02910 Fumarate reductase flavoprotein C-term TF3313_RS02535 PF07715 TonB-dependent Receptor Plug Domain TF3313_RS02535 PF00593 TonB dependent receptor TF3313_RS02540 PF14322 Starch-binding associating with outer membrane TF3313_RS02540 PF07980 SusD family TF3313_RS02550 PF00916 Sulfate permease family TF3313_RS02550 PF01740 STAS domain TF3313_RS02555 PF00472 RF-1 domain TF3313_RS02555 PF03462 PCRF domain TF3313_RS02640 PF00271 Helicase conserved C-terminal domain TF3313_RS02640 PF00176 SNF2 family N-terminal domain TF3313_RS02640 PF04434 SWIM zinc finger TF3313_RS02855 PF01507 Phosphoadenosine phosphosulfate reductase family TF3313_RS02895 PF00885 6,7-dimethyl-8-ribityllumazine synthase TF3313_RS02905 PF02463 RecF/RecN/SMC N terminal domain TF3313_RS02920 PF00595 PDZ domain TF3313_RS02920 PF03572 Peptidase family S41 TF3313_RS02930 PF01467 Cytidylyltransferase-like TF3313_RS02935 PF00625 Guanylate kinase TF3313_RS02940 PF08340 Domain of unknown function (DUF1732) TF3313_RS02940 PF03755 YicC-like family, N-terminal region TF3313_RS02970 PF00501 AMP-binding enzyme TF3313_RS02975 PF00919 Uncharacterized protein family UPF0004 TF3313_RS02975 PF01938 TRAM domain TF3313_RS02975 PF04055 Radical SAM superfamily TF3313_RS02985 PF00535 Glycosyl transferase family 2 TF3313_RS03005 PF00950 ABC 3 transport family TF3313_RS03010 PF02021 Uncharacterised protein family UPF0102 TF3313_RS03025 PF02837 Glycosyl hydrolases family 2, sugar binding domain TF3313_RS03030 PF00231 ATP synthase TF3313_RS03035 PF00306 ATP synthase alpha/beta chain, C terminal domain TF3313_RS03035 PF02874 ATP synthase alpha/beta family, beta-barrel domain TF3313_RS03035 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TF3313_RS03040 PF00213 ATP synthase delta (OSCP) subunit TF3313_RS03045 PF00430 ATP synthase B/B' CF(0) TF3313_RS03050 PF00137 ATP synthase subunit C TF3313_RS03055 PF00119 ATP synthase A chain TF3313_RS03065 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain TF3313_RS03070 PF02874 ATP synthase alpha/beta family, beta-barrel domain TF3313_RS03070 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TF3313_RS03085 PF00009 Elongation factor Tu GTP binding domain TF3313_RS03085 PF03144 Elongation factor Tu domain 2 TF3313_RS03085 PF16658 Class II release factor RF3, C-terminal domain TF3313_RS03090 PF04321 RmlD substrate binding domain TF3313_RS03100 PF00753 Metallo-beta-lactamase superfamily TF3313_RS03105 PF05193 Peptidase M16 inactive domain TF3313_RS03105 PF00675 Insulinase (Peptidase family M16) TF3313_RS03110 PF03062 MBOAT, membrane-bound O-acyltransferase family TF3313_RS03130 PF00012 Hsp70 protein TF3313_RS03205 PF00270 DEAD/DEAH box helicase TF3313_RS03205 PF13749 Putative ATP-dependent DNA helicase recG C-terminal TF3313_RS03205 PF17191 RecG wedge domain TF3313_RS03235 PF14310 Fibronectin type III-like domain TF3313_RS03235 PF01915 Glycosyl hydrolase family 3 C-terminal domain TF3313_RS03235 PF00933 Glycosyl hydrolase family 3 N terminal domain TF3313_RS03260 PF00413 Matrixin TF3313_RS03265 PF05188 MutS domain II TF3313_RS03265 PF05190 MutS family domain IV TF3313_RS03265 PF00488 MutS domain V TF3313_RS03265 PF01624 MutS domain I TF3313_RS03265 PF05192 MutS domain III TF3313_RS03270 PF08450 SMP-30/Gluconolactonase/LRE-like region TF3313_RS03285 PF01676 Metalloenzyme superfamily TF3313_RS03285 PF06415 BPG-independent PGAM N-terminus (iPGM_N) TF3313_RS03300 PF01996 F420-0:Gamma-glutamyl ligase TF3313_RS03300 PF00881 Nitroreductase family TF3313_RS03310 PF00005 ABC transporter TF3313_RS03315 PF00696 Amino acid kinase family TF3313_RS03315 PF01842 ACT domain TF3313_RS03320 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain TF3313_RS03320 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain TF3313_RS03335 PF01408 Oxidoreductase family, NAD-binding Rossmann fold TF3313_RS03335 PF02894 Oxidoreductase family, C-terminal alpha/beta domain TF3313_RS03340 PF00593 TonB dependent receptor TF3313_RS03340 PF07715 TonB-dependent Receptor Plug Domain TF3313_RS03345 PF07980 SusD family TF3313_RS03345 PF14322 Starch-binding associating with outer membrane TF3313_RS03350 PF16385 Domain of unknown function TF3313_RS03350 PF00884 Sulfatase TF3313_RS03375 PF14535 AMP-binding enzyme C-terminal domain TF3313_RS03375 PF00501 AMP-binding enzyme TF3313_RS03385 PF00221 Aromatic amino acid lyase TF3313_RS03410 PF07715 TonB-dependent Receptor Plug Domain TF3313_RS03410 PF00593 TonB dependent receptor TF3313_RS03430 PF00521 DNA gyrase/topoisomerase IV, subunit A TF3313_RS03440 PF11818 C-terminal domain of tail specific protease (DUF3340) TF3313_RS03440 PF00595 PDZ domain TF3313_RS03440 PF03572 Peptidase family S41 TF3313_RS03440 PF17804 Tail specific protease N-terminal domain TF3313_RS03445 PF13614 AAA domain TF3313_RS03450 PF17762 HTH domain found in ParB protein TF3313_RS03450 PF02195 ParB-like nuclease domain TF3313_RS03460 PF01476 LysM domain TF3313_RS03460 PF05257 CHAP domain TF3313_RS03465 PF13291 ACT domain TF3313_RS03465 PF02824 TGS domain TF3313_RS03465 PF04607 Region found in RelA / SpoT proteins TF3313_RS03475 PF01699 Sodium/calcium exchanger protein TF3313_RS03485 PF01476 LysM domain TF3313_RS03485 PF01551 Peptidase family M23 TF3313_RS03485 PF08525 Opacity-associated protein A N-terminal motif TF3313_RS03490 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain TF3313_RS03490 PF01411 tRNA synthetases class II (A) TF3313_RS03490 PF02272 DHHA1 domain TF3313_RS03495 PF01761 3-dehydroquinate synthase TF3313_RS03505 PF00884 Sulfatase TF3313_RS03505 PF16385 Domain of unknown function TF3313_RS03510 PF01408 Oxidoreductase family, NAD-binding Rossmann fold TF3313_RS03515 PF17392 Urocanase C-terminal domain TF3313_RS03515 PF01175 Urocanase Rossmann-like domain TF3313_RS03515 PF17391 Urocanase N-terminal domain TF3313_RS03530 PF09906 Uncharacterized protein conserved in bacteria (DUF2135) TF3313_RS03535 PF07837 Formiminotransferase domain, N-terminal subdomain TF3313_RS03535 PF02971 Formiminotransferase domain TF3313_RS03540 PF01979 Amidohydrolase family TF3313_RS03550 PF04961 Formiminotransferase-cyclodeaminase TF3313_RS03555 PF00221 Aromatic amino acid lyase TF3313_RS03575 PF17783 CvfB-like winged helix domain TF3313_RS03575 PF13509 S1 domain TF3313_RS03585 PF01569 PAP2 superfamily TF3313_RS03595 PF00328 Histidine phosphatase superfamily (branch 2) TF3313_RS03600 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) TF3313_RS03605 PF00005 ABC transporter TF3313_RS03610 PF00209 Sodium:neurotransmitter symporter family TF3313_RS03615 PF01263 Aldose 1-epimerase TF3313_RS03620 PF02445 Quinolinate synthetase A protein TF3313_RS03660 PF18255 DNA processing protein A sterile alpha motif domain TF3313_RS03660 PF02481 DNA recombination-mediator protein A TF3313_RS03665 PF00884 Sulfatase TF3313_RS03670 PF00291 Pyridoxal-phosphate dependent enzyme TF3313_RS03675 PF01641 SelR domain TF3313_RS03675 PF01625 Peptide methionine sulfoxide reductase TF3313_RS03700 PF00873 AcrB/AcrD/AcrF family TF3313_RS03705 PF00873 AcrB/AcrD/AcrF family TF3313_RS03725 PF00005 ABC transporter TF3313_RS03730 PF01238 Phosphomannose isomerase type I TF3313_RS03735 PF02806 Alpha amylase, C-terminal all-beta domain TF3313_RS03735 PF00128 Alpha amylase, catalytic domain TF3313_RS03735 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) TF3313_RS03745 PF08502 LeuA allosteric (dimerisation) domain TF3313_RS03745 PF00682 HMGL-like TF3313_RS03750 PF00330 Aconitase family (aconitate hydratase) TF3313_RS03760 PF00694 Aconitase C-terminal domain TF3313_RS03765 PF00682 HMGL-like TF3313_RS03765 PF08502 LeuA allosteric (dimerisation) domain TF3313_RS03770 PF00180 Isocitrate/isopropylmalate dehydrogenase TF3313_RS03790 PF00588 SpoU rRNA Methylase family TF3313_RS03790 PF08032 RNA 2'-O ribose methyltransferase substrate binding TF3313_RS03810 PF00999 Sodium/hydrogen exchanger family TF3313_RS03815 PF02607 B12 binding domain TF3313_RS03815 PF02965 Vitamin B12 dependent methionine synthase, activation domain TF3313_RS03815 PF00809 Pterin binding enzyme TF3313_RS03815 PF02310 B12 binding domain TF3313_RS03815 PF02574 Homocysteine S-methyltransferase TF3313_RS03820 PF12392 Collagenase TF3313_RS03820 PF01136 Peptidase family U32 TF3313_RS03825 PF04204 Homoserine O-succinyltransferase TF3313_RS03830 PF18146 Damage-inducible protein CinA KH domain TF3313_RS03830 PF02464 Competence-damaged protein TF3313_RS03830 PF00994 Probable molybdopterin binding domain TF3313_RS03835 PF00814 Glycoprotease family TF3313_RS03850 PF01613 Flavin reductase like domain TF3313_RS03855 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain TF3313_RS03855 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain TF3313_RS03860 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain TF3313_RS03860 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain TF3313_RS03865 PF01694 Rhomboid family TF3313_RS03885 PF04542 Sigma-70 region 2 TF3313_RS03885 PF04545 Sigma-70, region 4 TF3313_RS03955 PF00512 His Kinase A (phospho-acceptor) domain TF3313_RS03955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TF3313_RS03960 PF00486 Transcriptional regulatory protein, C terminal TF3313_RS03960 PF00072 Response regulator receiver domain TF3313_RS03985 PF02654 Cobalamin-5-phosphate synthase TF3313_RS03990 PF02277 Phosphoribosyltransferase TF3313_RS04010 PF02146 Sir2 family TF3313_RS04015 PF13173 AAA domain TF3313_RS04015 PF13635 Domain of unknown function (DUF4143) TF3313_RS04035 PF01040 UbiA prenyltransferase family TF3313_RS04045 PF04542 Sigma-70 region 2 TF3313_RS04045 PF08281 Sigma-70, region 4 TF3313_RS04060 PF00158 Sigma-54 interaction domain TF3313_RS04060 PF00072 Response regulator receiver domain TF3313_RS04060 PF02954 Bacterial regulatory protein, Fis family TF3313_RS04065 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE TF3313_RS04070 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family TF3313_RS04075 PF01588 Putative tRNA binding domain TF3313_RS04075 PF09334 tRNA synthetases class I (M) TF3313_RS04075 PF08264 Anticodon-binding domain of tRNA TF3313_RS04080 PF00271 Helicase conserved C-terminal domain TF3313_RS04080 PF00270 DEAD/DEAH box helicase TF3313_RS04110 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) TF3313_RS04120 PF01293 Phosphoenolpyruvate carboxykinase TF3313_RS04130 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TF3313_RS04130 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain TF3313_RS04135 PF07670 Nucleoside recognition TF3313_RS04140 PF02130 Uncharacterized protein family UPF0054 TF3313_RS04150 PF00133 tRNA synthetases class I (I, L, M and V) TF3313_RS04150 PF13603 Leucyl-tRNA synthetase, Domain 2 TF3313_RS04150 PF08264 Anticodon-binding domain of tRNA TF3313_RS04155 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 TF3313_RS04155 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) TF3313_RS04160 PF01725 Ham1 family TF3313_RS04175 PF00501 AMP-binding enzyme TF3313_RS04180 PF01810 LysE type translocator TF3313_RS04185 PF02401 LytB protein TF3313_RS04190 PF02224 Cytidylate kinase TF3313_RS04205 PF00348 Polyprenyl synthetase TF3313_RS04210 PF01026 TatD related DNase TF3313_RS04220 PF01618 MotA/TolQ/ExbB proton channel family TF3313_RS04245 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit TF3313_RS04250 PF00364 Biotin-requiring enzyme TF3313_RS04260 PF01039 Carboxyl transferase domain TF3313_RS04270 PF00696 Amino acid kinase family TF3313_RS04285 PF00593 TonB dependent receptor TF3313_RS04285 PF07715 TonB-dependent Receptor Plug Domain TF3313_RS04290 PF14322 Starch-binding associating with outer membrane TF3313_RS04290 PF07980 SusD family TF3313_RS04300 PF01238 Phosphomannose isomerase type I TF3313_RS04305 PF02806 Alpha amylase, C-terminal all-beta domain TF3313_RS04305 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) TF3313_RS04305 PF00128 Alpha amylase, catalytic domain TF3313_RS04325 PF00593 TonB dependent receptor TF3313_RS04325 PF07715 TonB-dependent Receptor Plug Domain TF3313_RS04330 PF14322 Starch-binding associating with outer membrane TF3313_RS04330 PF07980 SusD family TF3313_RS04350 PF13380 CoA binding domain TF3313_RS04350 PF13607 Succinyl-CoA ligase like flavodoxin domain TF3313_RS04355 PF12320 Type 5 capsule protein repressor C-terminal domain TF3313_RS04355 PF00149 Calcineurin-like phosphoesterase TF3313_RS04365 PF00480 ROK family TF3313_RS04385 PF00186 Dihydrofolate reductase TF3313_RS04390 PF00303 Thymidylate synthase TF3313_RS04395 PF00860 Permease family TF3313_RS04405 PF01367 5'-3' exonuclease, C-terminal SAM fold TF3313_RS04405 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain TF3313_RS04405 PF00476 DNA polymerase family A TF3313_RS04405 PF01612 3'-5' exonuclease TF3313_RS04410 PF00348 Polyprenyl synthetase TF3313_RS04425 PF01522 Polysaccharide deacetylase TF3313_RS04430 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region TF3313_RS04430 PF00326 Prolyl oligopeptidase family TF3313_RS04435 PF02926 THUMP domain TF3313_RS04435 PF01170 Putative RNA methylase family UPF0020 TF3313_RS04450 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain TF3313_RS04450 PF00877 NlpC/P60 family TF3313_RS04455 PF13378 Enolase C-terminal domain-like TF3313_RS04455 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain TF3313_RS04470 PF01018 GTP1/OBG TF3313_RS04470 PF04055 Radical SAM superfamily TF3313_RS04470 PF01926 50S ribosome-binding GTPase TF3313_RS04495 PF07715 TonB-dependent Receptor Plug Domain TF3313_RS04495 PF00593 TonB dependent receptor TF3313_RS04500 PF01593 Flavin containing amine oxidoreductase TF3313_RS04505 PF00083 Sugar (and other) transporter TF3313_RS04525 PF01230 HIT domain TF3313_RS04530 PF01272 Transcription elongation factor, GreA/GreB, C-term TF3313_RS04530 PF03449 Transcription elongation factor, N-terminal TF3313_RS04540 PF00571 CBS domain TF3313_RS04540 PF01380 SIS domain TF3313_RS04545 PF00294 pfkB family carbohydrate kinase TF3313_RS04550 PF17755 UvrA DNA-binding domain TF3313_RS04550 PF17760 UvrA interaction domain TF3313_RS04555 PF01546 Peptidase family M20/M25/M40 TF3313_RS04555 PF07687 Peptidase dimerisation domain TF3313_RS04560 PF01138 3' exoribonuclease family, domain 1 TF3313_RS04560 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain TF3313_RS04560 PF00575 S1 RNA binding domain TF3313_RS04560 PF03725 3' exoribonuclease family, domain 2 TF3313_RS04560 PF00013 KH domain TF3313_RS04570 PF00535 Glycosyl transferase family 2 TF3313_RS04575 PF00534 Glycosyl transferases group 1 TF3313_RS04575 PF13439 Glycosyltransferase Family 4 TF3313_RS04585 PF09318 Glycosyl transferase 1 domain A TF3313_RS04585 PF00534 Glycosyl transferases group 1 TF3313_RS04590 PF02350 UDP-N-acetylglucosamine 2-epimerase TF3313_RS04595 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain TF3313_RS04595 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain TF3313_RS04595 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain TF3313_RS04600 PF13784 Fic/DOC family N-terminal TF3313_RS04600 PF02661 Fic/DOC family TF3313_RS04605 PF17191 RecG wedge domain TF3313_RS04605 PF00270 DEAD/DEAH box helicase TF3313_RS04605 PF13749 Putative ATP-dependent DNA helicase recG C-terminal TF3313_RS04610 PF13537 Glutamine amidotransferase domain TF3313_RS04610 PF00733 Asparagine synthase TF3313_RS04635 PF00795 Carbon-nitrogen hydrolase TF3313_RS04640 PF00202 Aminotransferase class-III TF3313_RS04650 PF02348 Cytidylyltransferase TF3313_RS04660 PF13302 Acetyltransferase (GNAT) domain TF3313_RS04665 PF00483 Nucleotidyl transferase TF3313_RS04670 PF02350 UDP-N-acetylglucosamine 2-epimerase TF3313_RS04675 PF03102 NeuB family TF3313_RS04675 PF08666 SAF domain TF3313_RS04685 PF01370 NAD dependent epimerase/dehydratase family TF3313_RS04685 PF02911 Formyl transferase, C-terminal domain TF3313_RS04685 PF00551 Formyl transferase TF3313_RS04695 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family TF3313_RS04700 PF01370 NAD dependent epimerase/dehydratase family TF3313_RS04705 PF01943 Polysaccharide biosynthesis protein TF3313_RS04715 PF01408 Oxidoreductase family, NAD-binding Rossmann fold TF3313_RS04715 PF02894 Oxidoreductase family, C-terminal alpha/beta domain TF3313_RS04725 PF03572 Peptidase family S41 TF3313_RS04725 PF01471 Putative peptidoglycan binding domain TF3313_RS04725 PF17820 PDZ domain TF3313_RS04730 PF01467 Cytidylyltransferase-like TF3313_RS04735 PF00204 DNA gyrase B TF3313_RS04735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TF3313_RS04735 PF01751 Toprim domain TF3313_RS04735 PF00986 DNA gyrase B subunit, carboxyl terminus TF3313_RS04770 PF00551 Formyl transferase TF3313_RS04775 PF00550 Phosphopantetheine attachment site TF3313_RS04780 PF02801 Beta-ketoacyl synthase, C-terminal domain TF3313_RS04780 PF00109 Beta-ketoacyl synthase, N-terminal domain TF3313_RS04785 PF00035 Double-stranded RNA binding motif TF3313_RS04785 PF14622 Ribonuclease-III-like TF3313_RS04795 PF00365 Phosphofructokinase TF3313_RS04800 PF00149 Calcineurin-like phosphoesterase TF3313_RS04800 PF02872 5'-nucleotidase, C-terminal domain TF3313_RS04805 PF00593 TonB dependent receptor TF3313_RS04810 PF01134 Glucose inhibited division protein A TF3313_RS04810 PF13932 GidA associated domain TF3313_RS04815 PF01541 GIY-YIG catalytic domain TF3313_RS04815 PF08459 UvrC Helix-hairpin-helix N-terminal TF3313_RS04820 PF02580 D-Tyr-tRNA(Tyr) deacylase TF3313_RS04825 PF00413 Matrixin TF3313_RS04850 PF00413 Matrixin TF3313_RS04865 PF00413 Matrixin TF3313_RS04875 PF00753 Metallo-beta-lactamase superfamily TF3313_RS04875 PF12706 Beta-lactamase superfamily domain TF3313_RS04880 PF04552 Sigma-54, DNA binding domain TF3313_RS04880 PF04963 Sigma-54 factor, core binding domain TF3313_RS04880 PF00309 Sigma-54 factor, Activator interacting domain (AID) TF3313_RS04885 PF01597 Glycine cleavage H-protein TF3313_RS04890 PF00731 AIR carboxylase TF3313_RS04895 PF04551 GcpE protein TF3313_RS04925 PF02075 Crossover junction endodeoxyribonuclease RuvC TF3313_RS04930 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain TF3313_RS04930 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase TF3313_RS04935 PF00072 Response regulator receiver domain TF3313_RS04935 PF00158 Sigma-54 interaction domain TF3313_RS04935 PF02954 Bacterial regulatory protein, Fis family TF3313_RS04955 PF05221 S-adenosyl-L-homocysteine hydrolase TF3313_RS04955 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain TF3313_RS04960 PF02801 Beta-ketoacyl synthase, C-terminal domain TF3313_RS04960 PF00109 Beta-ketoacyl synthase, N-terminal domain TF3313_RS04970 PF00892 EamA-like transporter family TF3313_RS04980 PF01207 Dihydrouridine synthase (Dus) TF3313_RS04990 PF01118 Semialdehyde dehydrogenase, NAD binding domain TF3313_RS04990 PF02774 Semialdehyde dehydrogenase, dimerisation domain TF3313_RS05010 PF18381 YcaO cyclodehydratase C-terminal domain TF3313_RS05010 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding TF3313_RS05020 PF02547 Queuosine biosynthesis protein TF3313_RS05025 PF00581 Rhodanese-like domain TF3313_RS05030 PF00884 Sulfatase TF3313_RS05040 PF01791 DeoC/LacD family aldolase TF3313_RS05050 PF02690 Na+/Pi-cotransporter TF3313_RS05055 PF02614 Glucuronate isomerase TF3313_RS05060 PF00365 Phosphofructokinase TF3313_RS05090 PF07726 ATPase family associated with various cellular activities (AAA) TF3313_RS05090 PF17863 AAA lid domain TF3313_RS05100 PF00413 Matrixin TF3313_RS05110 PF00413 Matrixin TF3313_RS05125 PF00413 Matrixin TF3313_RS05145 PF01914 MarC family integral membrane protein TF3313_RS05150 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain TF3313_RS05150 PF02844 Phosphoribosylglycinamide synthetase, N domain TF3313_RS05150 PF02843 Phosphoribosylglycinamide synthetase, C domain TF3313_RS05175 PF10282 Lactonase, 7-bladed beta-propeller TF3313_RS05195 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family TF3313_RS05200 PF00593 TonB dependent receptor TF3313_RS05200 PF07715 TonB-dependent Receptor Plug Domain TF3313_RS05205 PF14322 Starch-binding associating with outer membrane TF3313_RS05205 PF07980 SusD family TF3313_RS05235 PF00593 TonB dependent receptor TF3313_RS05235 PF07715 TonB-dependent Receptor Plug Domain TF3313_RS05255 PF00593 TonB dependent receptor TF3313_RS05255 PF07715 TonB-dependent Receptor Plug Domain TF3313_RS05270 PF00196 Bacterial regulatory proteins, luxR family TF3313_RS05270 PF00072 Response regulator receiver domain TF3313_RS05285 PF03781 Sulfatase-modifying factor enzyme 1 TF3313_RS05300 PF03129 Anticodon binding domain TF3313_RS05315 PF05683 Fumarase C-terminus TF3313_RS05315 PF05681 Fumarate hydratase (Fumerase) TF3313_RS05320 PF00072 Response regulator receiver domain TF3313_RS05320 PF00486 Transcriptional regulatory protein, C terminal TF3313_RS05325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TF3313_RS05325 PF00512 His Kinase A (phospho-acceptor) domain TF3313_RS05355 PF03412 Peptidase C39 family TF3313_RS05355 PF00664 ABC transporter transmembrane region TF3313_RS05355 PF00005 ABC transporter TF3313_RS05390 PF00593 TonB dependent receptor TF3313_RS05390 PF07715 TonB-dependent Receptor Plug Domain TF3313_RS05405 PF00691 OmpA family TF3313_RS05405 PF01389 OmpA-like transmembrane domain TF3313_RS05410 PF02547 Queuosine biosynthesis protein TF3313_RS05415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TF3313_RS05415 PF00512 His Kinase A (phospho-acceptor) domain TF3313_RS05415 PF07495 Y_Y_Y domain TF3313_RS05415 PF12833 Helix-turn-helix domain TF3313_RS05415 PF07494 Two component regulator propeller TF3313_RS05415 PF00072 Response regulator receiver domain TF3313_RS05425 PF01406 tRNA synthetases class I (C) catalytic domain TF3313_RS05425 PF09190 DALR domain TF3313_RS05435 PF00550 Phosphopantetheine attachment site TF3313_RS05460 PF00109 Beta-ketoacyl synthase, N-terminal domain TF3313_RS05460 PF02801 Beta-ketoacyl synthase, C-terminal domain TF3313_RS05470 PF00550 Phosphopantetheine attachment site TF3313_RS05490 PF01923 Cobalamin adenosyltransferase TF3313_RS05505 PF03781 Sulfatase-modifying factor enzyme 1 TF3313_RS05535 PF10502 Signal peptidase, peptidase S26 TF3313_RS05540 PF01113 Dihydrodipicolinate reductase, N-terminus TF3313_RS05540 PF05173 Dihydrodipicolinate reductase, C-terminus TF3313_RS05570 PF00255 Glutathione peroxidase TF3313_RS05575 PF01765 Ribosome recycling factor TF3313_RS05580 PF03193 RsgA GTPase TF3313_RS05580 PF16745 RsgA N-terminal domain TF3313_RS05585 PF01966 HD domain TF3313_RS05585 PF13286 Phosphohydrolase-associated domain TF3313_RS05590 PF00593 TonB dependent receptor TF3313_RS05590 PF07715 TonB-dependent Receptor Plug Domain TF3313_RS05600 PF00871 Acetokinase family TF3313_RS05605 PF01515 Phosphate acetyl/butaryl transferase TF3313_RS05610 PF02457 DisA bacterial checkpoint controller nucleotide-binding TF3313_RS05615 PF00809 Pterin binding enzyme TF3313_RS05620 PF08245 Mur ligase middle domain TF3313_RS05620 PF02875 Mur ligase family, glutamate ligase domain TF3313_RS05620 PF01225 Mur ligase family, catalytic domain TF3313_RS05635 PF01136 Peptidase family U32 TF3313_RS05670 PF12008 Type I restriction and modification enzyme - subunit R C terminal TF3313_RS05670 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) TF3313_RS05670 PF18766 SWI2/SNF2 ATPase TF3313_RS05685 PF12161 HsdM N-terminal domain TF3313_RS05685 PF02384 N-6 DNA Methylase TF3313_RS05725 PF00589 Phage integrase family TF3313_RS05725 PF02899 Phage integrase, N-terminal SAM-like domain TF3313_RS05730 PF00589 Phage integrase family TF3313_RS05735 PF00589 Phage integrase family TF3313_RS05735 PF02899 Phage integrase, N-terminal SAM-like domain TF3313_RS05770 PF00171 Aldehyde dehydrogenase family TF3313_RS05775 PF01048 Phosphorylase superfamily TF3313_RS05795 PF00132 Bacterial transferase hexapeptide (six repeats) TF3313_RS05795 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 TF3313_RS05800 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase TF3313_RS05800 PF07977 FabA-like domain TF3313_RS05805 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD TF3313_RS05805 PF00132 Bacterial transferase hexapeptide (six repeats) TF3313_RS05815 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family TF3313_RS05820 PF03462 PCRF domain TF3313_RS05820 PF00472 RF-1 domain TF3313_RS05825 PF02769 AIR synthase related protein, C-terminal domain TF3313_RS05825 PF00586 AIR synthase related protein, N-terminal domain TF3313_RS05855 PF03819 MazG nucleotide pyrophosphohydrolase domain TF3313_RS05860 PF16355 Domain of unknown function (DUF4982) TF3313_RS05860 PF00703 Glycosyl hydrolases family 2 TF3313_RS05860 PF02836 Glycosyl hydrolases family 2, TIM barrel domain TF3313_RS05860 PF02837 Glycosyl hydrolases family 2, sugar binding domain TF3313_RS05890 PF00589 Phage integrase family TF3313_RS05890 PF02899 Phage integrase, N-terminal SAM-like domain TF3313_RS05900 PF00398 Ribosomal RNA adenine dimethylase TF3313_RS05905 PF01544 CorA-like Mg2+ transporter protein TF3313_RS05910 PF01078 Magnesium chelatase, subunit ChlI TF3313_RS05910 PF13335 Magnesium chelatase, subunit ChlI C-terminal TF3313_RS05915 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TF3313_RS05935 PF00593 TonB dependent receptor TF3313_RS05935 PF07715 TonB-dependent Receptor Plug Domain TF3313_RS05950 PF00535 Glycosyl transferase family 2 TF3313_RS05975 PF00593 TonB dependent receptor TF3313_RS05975 PF07715 TonB-dependent Receptor Plug Domain TF3313_RS05995 PF07715 TonB-dependent Receptor Plug Domain TF3313_RS05995 PF00593 TonB dependent receptor TF3313_RS06000 PF01926 50S ribosome-binding GTPase TF3313_RS06000 PF06071 Protein of unknown function (DUF933) TF3313_RS06050 PF00664 ABC transporter transmembrane region TF3313_RS06050 PF00005 ABC transporter TF3313_RS06050 PF03412 Peptidase C39 family TF3313_RS06060 PF00149 Calcineurin-like phosphoesterase TF3313_RS06065 PF01883 Iron-sulfur cluster assembly protein TF3313_RS06070 PF04002 RadC-like JAB domain TF3313_RS06075 PF01132 Elongation factor P (EF-P) OB domain TF3313_RS06075 PF08207 Elongation factor P (EF-P) KOW-like domain TF3313_RS06075 PF09285 Elongation factor P, C-terminal TF3313_RS06095 PF00166 Chaperonin 10 Kd subunit TF3313_RS06100 PF00118 TCP-1/cpn60 chaperonin family TF3313_RS06105 PF00156 Phosphoribosyl transferase domain TF3313_RS06115 PF17827 PrmC N-terminal domain TF3313_RS06115 PF05175 Methyltransferase small domain TF3313_RS06120 PF01872 RibD C-terminal domain TF3313_RS06120 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region TF3313_RS06135 PF01255 Putative undecaprenyl diphosphate synthase TF3313_RS06155 PF01177 Asp/Glu/Hydantoin racemase TF3313_RS06170 PF00005 ABC transporter TF3313_RS06175 PF12704 MacB-like periplasmic core domain TF3313_RS06175 PF02687 FtsX-like permease family TF3313_RS06180 PF02033 Ribosome-binding factor A TF3313_RS06190 PF14322 Starch-binding associating with outer membrane TF3313_RS06190 PF07980 SusD family TF3313_RS06195 PF07715 TonB-dependent Receptor Plug Domain TF3313_RS06195 PF00593 TonB dependent receptor TF3313_RS06210 PF01596 O-methyltransferase TF3313_RS06215 PF00224 Pyruvate kinase, barrel domain TF3313_RS06215 PF02887 Pyruvate kinase, alpha/beta domain TF3313_RS06220 PF01220 Dehydroquinase class II TF3313_RS06240 PF13185 GAF domain TF3313_RS06245 PF01368 DHH family TF3313_RS06245 PF02272 DHHA1 domain TF3313_RS06245 PF00571 CBS domain TF3313_RS06245 PF01743 Poly A polymerase head domain TF3313_RS06250 PF02824 TGS domain TF3313_RS06250 PF13291 ACT domain TF3313_RS06250 PF04607 Region found in RelA / SpoT proteins TF3313_RS06255 PF13419 Haloacid dehalogenase-like hydrolase TF3313_RS06260 PF01640 Peptidase C10 family TF3313_RS06260 PF13734 Spi protease inhibitor TF3313_RS06275 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal TF3313_RS06275 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal TF3313_RS06285 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain TF3313_RS06285 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain TF3313_RS06290 PF00465 Iron-containing alcohol dehydrogenase TF3313_RS06295 PF00171 Aldehyde dehydrogenase family TF3313_RS06300 PF00441 Acyl-CoA dehydrogenase, C-terminal domain TF3313_RS06300 PF02770 Acyl-CoA dehydrogenase, middle domain TF3313_RS06300 PF02771 Acyl-CoA dehydrogenase, N-terminal domain TF3313_RS06305 PF01012 Electron transfer flavoprotein domain TF3313_RS06310 PF00766 Electron transfer flavoprotein FAD-binding domain TF3313_RS06310 PF01012 Electron transfer flavoprotein domain TF3313_RS06320 PF00005 ABC transporter TF3313_RS06320 PF12399 Branched-chain amino acid ATP-binding cassette transporter TF3313_RS06330 PF01119 DNA mismatch repair protein, C-terminal domain TF3313_RS06330 PF08676 MutL C terminal dimerisation domain TF3313_RS06345 PF00639 PPIC-type PPIASE domain TF3313_RS06345 PF09312 SurA N-terminal domain TF3313_RS06355 PF00639 PPIC-type PPIASE domain TF3313_RS06355 PF09312 SurA N-terminal domain TF3313_RS06360 PF00270 DEAD/DEAH box helicase TF3313_RS06360 PF00271 Helicase conserved C-terminal domain TF3313_RS06360 PF16124 RecQ zinc-binding TF3313_RS06360 PF09382 RQC domain TF3313_RS06360 PF00570 HRDC domain TF3313_RS06365 PF06689 ClpX C4-type zinc finger TF3313_RS06365 PF07724 AAA domain (Cdc48 subfamily) TF3313_RS06365 PF10431 C-terminal, D2-small domain, of ClpB protein TF3313_RS06370 PF00574 Clp protease TF3313_RS06375 PF05697 Bacterial trigger factor protein (TF) TF3313_RS06375 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase TF3313_RS06375 PF05698 Bacterial trigger factor protein (TF) C-terminus TF3313_RS06400 PF04542 Sigma-70 region 2 TF3313_RS06400 PF08281 Sigma-70, region 4 TF3313_RS06405 PF00593 TonB dependent receptor TF3313_RS06405 PF07715 TonB-dependent Receptor Plug Domain TF3313_RS06410 PF00270 DEAD/DEAH box helicase TF3313_RS06410 PF00271 Helicase conserved C-terminal domain TF3313_RS06410 PF17191 RecG wedge domain TF3313_RS06430 PF00692 dUTPase TF3313_RS06450 PF00593 TonB dependent receptor TF3313_RS06450 PF07715 TonB-dependent Receptor Plug Domain TF3313_RS06465 PF12804 MobA-like NTP transferase domain TF3313_RS06470 PF03668 P-loop ATPase protein family TF3313_RS06485 PF00709 Adenylosuccinate synthetase TF3313_RS06495 PF03129 Anticodon binding domain TF3313_RS06495 PF13393 Histidyl-tRNA synthetase TF3313_RS06500 PF00082 Subtilase family TF3313_RS06500 PF05922 Peptidase inhibitor I9 TF3313_RS06520 PF01751 Toprim domain TF3313_RS06520 PF01131 DNA topoisomerase TF3313_RS06525 PF08281 Sigma-70, region 4 TF3313_RS06525 PF04542 Sigma-70 region 2 TF3313_RS06530 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region TF3313_RS06530 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region TF3313_RS06535 PF02773 S-adenosylmethionine synthetase, C-terminal domain TF3313_RS06535 PF02772 S-adenosylmethionine synthetase, central domain TF3313_RS06535 PF00438 S-adenosylmethionine synthetase, N-terminal domain TF3313_RS06540 PF00164 Ribosomal protein S12/S23 TF3313_RS06545 PF00177 Ribosomal protein S7p/S5e TF3313_RS06550 PF00679 Elongation factor G C-terminus TF3313_RS06550 PF14492 Elongation Factor G, domain II TF3313_RS06550 PF03764 Elongation factor G, domain IV TF3313_RS06550 PF00009 Elongation factor Tu GTP binding domain TF3313_RS06550 PF03144 Elongation factor Tu domain 2 TF3313_RS06555 PF00338 Ribosomal protein S10p/S20e TF3313_RS06560 PF00297 Ribosomal protein L3 TF3313_RS06565 PF00573 Ribosomal protein L4/L1 family TF3313_RS06570 PF00276 Ribosomal protein L23 TF3313_RS06575 PF03947 Ribosomal Proteins L2, C-terminal domain TF3313_RS06575 PF00181 Ribosomal Proteins L2, RNA binding domain TF3313_RS06580 PF00203 Ribosomal protein S19 TF3313_RS06585 PF00237 Ribosomal protein L22p/L17e TF3313_RS06590 PF00189 Ribosomal protein S3, C-terminal domain TF3313_RS06590 PF07650 KH domain TF3313_RS06595 PF00252 Ribosomal protein L16p/L10e TF3313_RS06600 PF00831 Ribosomal L29 protein TF3313_RS06605 PF00366 Ribosomal protein S17 TF3313_RS06610 PF00238 Ribosomal protein L14p/L23e TF3313_RS06615 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 TF3313_RS06615 PF00467 KOW motif TF3313_RS06620 PF00281 Ribosomal protein L5 TF3313_RS06620 PF00673 ribosomal L5P family C-terminus TF3313_RS06625 PF00253 Ribosomal protein S14p/S29e TF3313_RS06630 PF00410 Ribosomal protein S8 TF3313_RS06635 PF00347 Ribosomal protein L6 TF3313_RS06640 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast TF3313_RS06645 PF03719 Ribosomal protein S5, C-terminal domain TF3313_RS06645 PF00333 Ribosomal protein S5, N-terminal domain TF3313_RS06650 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A TF3313_RS06655 PF00344 SecY translocase TF3313_RS06660 PF00557 Metallopeptidase family M24 TF3313_RS06665 PF01176 Translation initiation factor 1A / IF-1 TF3313_RS06670 PF00416 Ribosomal protein S13/S18 TF3313_RS06675 PF00411 Ribosomal protein S11 TF3313_RS06680 PF01479 S4 domain TF3313_RS06680 PF00163 Ribosomal protein S4/S9 N-terminal domain TF3313_RS06685 PF01000 RNA polymerase Rpb3/RpoA insert domain TF3313_RS06685 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain TF3313_RS06685 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain TF3313_RS06690 PF01196 Ribosomal protein L17 TF3313_RS06695 PF00005 ABC transporter TF3313_RS06700 PF02405 Permease MlaE TF3313_RS06710 PF06969 HemN C-terminal domain TF3313_RS06710 PF04055 Radical SAM superfamily TF3313_RS06715 PF03764 Elongation factor G, domain IV TF3313_RS06715 PF03144 Elongation factor Tu domain 2 TF3313_RS06715 PF00679 Elongation factor G C-terminus TF3313_RS06715 PF00009 Elongation factor Tu GTP binding domain TF3313_RS06715 PF14492 Elongation Factor G, domain II TF3313_RS06755 PF01734 Patatin-like phospholipase TF3313_RS06760 PF00128 Alpha amylase, catalytic domain TF3313_RS06765 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase TF3313_RS06765 PF14572 Phosphoribosyl synthetase-associated domain TF3313_RS06790 PF00593 TonB dependent receptor TF3313_RS06790 PF07715 TonB-dependent Receptor Plug Domain TF3313_RS06805 PF03577 Peptidase family C69 TF3313_RS06850 PF02535 ZIP Zinc transporter TF3313_RS06860 PF01209 ubiE/COQ5 methyltransferase family TF3313_RS06865 PF08241 Methyltransferase domain TF3313_RS06870 PF01209 ubiE/COQ5 methyltransferase family TF3313_RS06880 PF08241 Methyltransferase domain TF3313_RS06900 PF00664 ABC transporter transmembrane region TF3313_RS06900 PF00005 ABC transporter TF3313_RS06910 PF00664 ABC transporter transmembrane region TF3313_RS06910 PF00005 ABC transporter TF3313_RS06915 PF04960 Glutaminase TF3313_RS06925 PF01545 Cation efflux family TF3313_RS06930 PF06574 FAD synthetase TF3313_RS06930 PF01687 Riboflavin kinase TF3313_RS06955 PF02368 Bacterial Ig-like domain (group 2) TF3313_RS06960 PF13186 Iron-sulfur cluster-binding domain TF3313_RS06960 PF04055 Radical SAM superfamily TF3313_RS06970 PF02910 Fumarate reductase flavoprotein C-term TF3313_RS06970 PF00890 FAD binding domain TF3313_RS06980 PF03485 Arginyl tRNA synthetase N terminal domain TF3313_RS06980 PF00750 tRNA synthetases class I (R) TF3313_RS06980 PF05746 DALR anticodon binding domain TF3313_RS06985 PF01131 DNA topoisomerase TF3313_RS06985 PF13368 Topoisomerase C-terminal repeat TF3313_RS06985 PF01751 Toprim domain TF3313_RS06990 PF10458 Valyl tRNA synthetase tRNA binding arm TF3313_RS06990 PF08264 Anticodon-binding domain of tRNA TF3313_RS06990 PF00133 tRNA synthetases class I (I, L, M and V) TF3313_RS07020 PF16199 Radical_SAM C-terminal domain TF3313_RS07020 PF04055 Radical SAM superfamily TF3313_RS07035 PF00326 Prolyl oligopeptidase family TF3313_RS07035 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region TF3313_RS07040 PF04055 Radical SAM superfamily TF3313_RS07065 PF00155 Aminotransferase class I and II TF3313_RS07070 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase TF3313_RS07070 PF00925 GTP cyclohydrolase II TF3313_RS07085 PF02576 RimP N-terminal domain TF3313_RS07085 PF17384 RimP C-terminal SH3 domain TF3313_RS07090 PF08529 NusA N-terminal domain TF3313_RS07090 PF13184 NusA-like KH domain TF3313_RS07095 PF00009 Elongation factor Tu GTP binding domain TF3313_RS07095 PF04760 Translation initiation factor IF-2, N-terminal region TF3313_RS07095 PF11987 Translation-initiation factor 2 TF3313_RS07105 PF01458 Uncharacterized protein family (UPF0051) TF3313_RS07110 PF00005 ABC transporter TF3313_RS07115 PF01458 Uncharacterized protein family (UPF0051) TF3313_RS07125 PF01594 AI-2E family transporter TF3313_RS07135 PF00793 DAHP synthetase I family TF3313_RS07135 PF18152 DAHP synthase ferredoxin-like domain TF3313_RS07140 PF00155 Aminotransferase class I and II TF3313_RS07145 PF01842 ACT domain TF3313_RS07145 PF01817 Chorismate mutase type II TF3313_RS07145 PF00800 Prephenate dehydratase TF3313_RS07150 PF00106 short chain dehydrogenase TF3313_RS07165 PF00266 Aminotransferase class-V TF3313_RS07175 PF01351 Ribonuclease HII TF3313_RS07180 PF02657 Fe-S metabolism associated domain TF3313_RS07190 PF07722 Peptidase C26 TF3313_RS07195 PF00204 DNA gyrase B TF3313_RS07195 PF00986 DNA gyrase B subunit, carboxyl terminus TF3313_RS07195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TF3313_RS07195 PF01751 Toprim domain TF3313_RS07200 PF03412 Peptidase C39 family TF3313_RS07200 PF00664 ABC transporter transmembrane region TF3313_RS07200 PF00005 ABC transporter TF3313_RS07230 PF00535 Glycosyl transferase family 2 TF3313_RS07275 PF01649 Ribosomal protein S20 TF3313_RS07290 PF07715 TonB-dependent Receptor Plug Domain TF3313_RS07290 PF00593 TonB dependent receptor TF3313_RS07300 PF00593 TonB dependent receptor TF3313_RS07300 PF07715 TonB-dependent Receptor Plug Domain TF3313_RS07310 PF00578 AhpC/TSA family TF3313_RS07320 PF00085 Thioredoxin TF3313_RS07325 PF01336 OB-fold nucleic acid binding domain TF3313_RS07325 PF02811 PHP domain TF3313_RS07325 PF07733 Bacterial DNA polymerase III alpha NTPase domain TF3313_RS07325 PF17657 Bacterial DNA polymerase III alpha subunit finger domain TF3313_RS07325 PF14579 Helix-hairpin-helix motif TF3313_RS07340 PF02142 MGS-like domain TF3313_RS07350 PF00886 Ribosomal protein S16 TF3313_RS07355 PF00085 Thioredoxin TF3313_RS07365 PF00271 Helicase conserved C-terminal domain TF3313_RS07365 PF16124 RecQ zinc-binding TF3313_RS07365 PF09382 RQC domain TF3313_RS07365 PF00570 HRDC domain TF3313_RS07365 PF00270 DEAD/DEAH box helicase TF3313_RS07370 PF10141 Single-strand DNA-specific exonuclease, C terminal domain TF3313_RS07370 PF17768 RecJ OB domain TF3313_RS07370 PF02272 DHHA1 domain TF3313_RS07370 PF01368 DHH family TF3313_RS07380 PF02911 Formyl transferase, C-terminal domain TF3313_RS07380 PF00551 Formyl transferase TF3313_RS07385 PF00183 Hsp90 protein TF3313_RS07395 PF00571 CBS domain TF3313_RS07395 PF01595 Cyclin M transmembrane N-terminal domain TF3313_RS07395 PF03471 Transporter associated domain TF3313_RS07400 PF03313 Serine dehydratase alpha chain TF3313_RS07400 PF03315 Serine dehydratase beta chain TF3313_RS07405 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain TF3313_RS07405 PF01409 tRNA synthetases class II core domain (F) TF3313_RS07410 PF00633 Helix-hairpin-helix motif TF3313_RS07410 PF10576 Iron-sulfur binding domain of endonuclease III TF3313_RS07410 PF00730 HhH-GPD superfamily base excision DNA repair protein TF3313_RS07415 PF05193 Peptidase M16 inactive domain TF3313_RS07415 PF00675 Insulinase (Peptidase family M16) TF3313_RS07450 PF00480 ROK family TF3313_RS07450 PF01325 Iron dependent repressor, N-terminal DNA binding domain TF3313_RS07460 PF00085 Thioredoxin TF3313_RS07465 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain TF3313_RS07465 PF07992 Pyridine nucleotide-disulphide oxidoreductase TF3313_RS07485 PF00082 Subtilase family TF3313_RS07500 PF01202 Shikimate kinase TF3313_RS07505 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase TF3313_RS07505 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg TF3313_RS07505 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II TF3313_RS07510 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TF3313_RS07515 PF18075 FtsX extracellular domain TF3313_RS07525 PF02673 Bacitracin resistance protein BacA TF3313_RS07530 PF01509 TruB family pseudouridylate synthase (N terminal domain) TF3313_RS07530 PF16198 tRNA pseudouridylate synthase B C-terminal domain TF3313_RS07535 PF02547 Queuosine biosynthesis protein TF3313_RS07540 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) TF3313_RS07550 PF07715 TonB-dependent Receptor Plug Domain TF3313_RS07550 PF00593 TonB dependent receptor TF3313_RS07550 PF07660 Secretin and TonB N terminus short domain TF3313_RS07555 PF07690 Major Facilitator Superfamily TF3313_RS07575 PF00155 Aminotransferase class I and II TF3313_RS07580 PF08281 Sigma-70, region 4 TF3313_RS07580 PF04542 Sigma-70 region 2 TF3313_RS07590 PF00575 S1 RNA binding domain TF3313_RS07600 PF03063 Prismane/CO dehydrogenase family TF3313_RS07605 PF14492 Elongation Factor G, domain II TF3313_RS07605 PF00679 Elongation factor G C-terminus TF3313_RS07605 PF03144 Elongation factor Tu domain 2 TF3313_RS07605 PF00009 Elongation factor Tu GTP binding domain TF3313_RS07610 PF00312 Ribosomal protein S15 TF3313_RS07615 PF12544 Lysine-2,3-aminomutase TF3313_RS07615 PF04055 Radical SAM superfamily TF3313_RS07635 PF01654 Cytochrome bd terminal oxidase subunit I TF3313_RS07645 PF08281 Sigma-70, region 4 TF3313_RS07645 PF04542 Sigma-70 region 2 TF3313_RS07655 PF00593 TonB dependent receptor TF3313_RS07655 PF07715 TonB-dependent Receptor Plug Domain TF3313_RS07665 PF01408 Oxidoreductase family, NAD-binding Rossmann fold TF3313_RS07665 PF02894 Oxidoreductase family, C-terminal alpha/beta domain TF3313_RS07680 PF05193 Peptidase M16 inactive domain TF3313_RS07680 PF00675 Insulinase (Peptidase family M16) TF3313_RS07685 PF00654 Voltage gated chloride channel TF3313_RS07690 PF02397 Bacterial sugar transferase TF3313_RS07695 PF01300 Telomere recombination TF3313_RS07705 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase TF3313_RS07715 PF01613 Flavin reductase like domain TF3313_RS07715 PF00753 Metallo-beta-lactamase superfamily TF3313_RS07720 PF01790 Prolipoprotein diacylglyceryl transferase TF3313_RS07725 PF01118 Semialdehyde dehydrogenase, NAD binding domain TF3313_RS07725 PF16654 Diaminopimelic acid dehydrogenase C-terminal domain TF3313_RS07730 PF00202 Aminotransferase class-III TF3313_RS07735 PF02774 Semialdehyde dehydrogenase, dimerisation domain TF3313_RS07735 PF01118 Semialdehyde dehydrogenase, NAD binding domain TF3313_RS07740 PF00764 Arginosuccinate synthase TF3313_RS07750 PF02863 Arginine repressor, C-terminal domain TF3313_RS07750 PF01316 Arginine repressor, DNA binding domain TF3313_RS07760 PF03825 Nucleoside H+ symporter TF3313_RS07765 PF02310 B12 binding domain TF3313_RS07765 PF04055 Radical SAM superfamily TF3313_RS07780 PF00005 ABC transporter TF3313_RS07795 PF02684 Lipid-A-disaccharide synthetase TF3313_RS07800 PF01975 Survival protein SurE TF3313_RS07805 PF13091 PLD-like domain TF3313_RS07805 PF13396 Phospholipase_D-nuclease N-terminal TF3313_RS07835 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TF3313_RS07845 PF13419 Haloacid dehalogenase-like hydrolase TF3313_RS07850 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain TF3313_RS07850 PF07685 CobB/CobQ-like glutamine amidotransferase domain TF3313_RS07855 PF03186 CobD/Cbib protein TF3313_RS07860 PF00155 Aminotransferase class I and II TF3313_RS07865 PF01042 Endoribonuclease L-PSP TF3313_RS07875 PF02542 YgbB family TF3313_RS07880 PF12002 MgsA AAA+ ATPase C terminal TF3313_RS07880 PF00004 ATPase family associated with various cellular activities (AAA) TF3313_RS07880 PF16193 AAA C-terminal domain TF3313_RS07895 PF03527 RHS protein TF3313_RS07905 PF03527 RHS protein TF3313_RS07955 PF14437 MafB19-like deaminase TF3313_RS07970 PF01746 tRNA (Guanine-1)-methyltransferase TF3313_RS07975 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain TF3313_RS07975 PF01588 Putative tRNA binding domain TF3313_RS07975 PF03147 Ferredoxin-fold anticodon binding domain TF3313_RS07975 PF03484 tRNA synthetase B5 domain TF3313_RS07975 PF03483 B3/4 domain TF3313_RS07980 PF01709 Transcriptional regulator TF3313_RS07995 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD TF3313_RS08005 PF08032 RNA 2'-O ribose methyltransferase substrate binding TF3313_RS08005 PF00588 SpoU rRNA Methylase family TF3313_RS08010 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I TF3313_RS08010 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II TF3313_RS08010 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III TF3313_RS08010 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain TF3313_RS08015 PF00829 Ribosomal prokaryotic L21 protein TF3313_RS08020 PF01016 Ribosomal L27 protein TF3313_RS08025 PF00877 NlpC/P60 family TF3313_RS08030 PF02403 Seryl-tRNA synthetase N-terminal domain TF3313_RS08030 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TF3313_RS08035 PF00149 Calcineurin-like phosphoesterase TF3313_RS08045 PF05860 haemagglutination activity domain TF3313_RS08045 PF13018 Extended Signal Peptide of Type V secretion system TF3313_RS08045 PF02661 Fic/DOC family TF3313_RS08045 PF13332 Hemagglutinin repeat TF3313_RS08045 PF03543 Yersinia/Haemophilus virulence surface antigen TF3313_RS08060 PF01032 FecCD transport family TF3313_RS08080 PF07499 RuvA, C-terminal domain TF3313_RS08080 PF01330 RuvA N terminal domain TF3313_RS08090 PF12705 PD-(D/E)XK nuclease superfamily TF3313_RS08090 PF00580 UvrD/REP helicase N-terminal domain TF3313_RS08090 PF13361 UvrD-like helicase C-terminal domain TF3313_RS08095 PF02666 Phosphatidylserine decarboxylase TF3313_RS08100 PF01066 CDP-alcohol phosphatidyltransferase TF3313_RS08110 PF16360 GTP-binding GTPase Middle Region TF3313_RS08110 PF01926 50S ribosome-binding GTPase TF3313_RS08110 PF13167 GTP-binding GTPase N-terminal TF3313_RS08145 PF02872 5'-nucleotidase, C-terminal domain TF3313_RS08145 PF00149 Calcineurin-like phosphoesterase TF3313_RS08165 PF00512 His Kinase A (phospho-acceptor) domain TF3313_RS08165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TF3313_RS08165 PF12833 Helix-turn-helix domain TF3313_RS08165 PF07494 Two component regulator propeller TF3313_RS08165 PF00072 Response regulator receiver domain TF3313_RS08165 PF07495 Y_Y_Y domain TF3313_RS08170 PF07691 PA14 domain TF3313_RS08170 PF02838 Glycosyl hydrolase family 20, domain 2 TF3313_RS08170 PF00728 Glycosyl hydrolase family 20, catalytic domain TF3313_RS08175 PF00464 Serine hydroxymethyltransferase TF3313_RS08185 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain TF3313_RS08185 PF02777 Iron/manganese superoxide dismutases, C-terminal domain TF3313_RS08190 PF11967 Recombination protein O N terminal TF3313_RS08190 PF02565 Recombination protein O C terminal TF3313_RS08200 PF00749 tRNA synthetases class I (E and Q), catalytic domain TF3313_RS08210 PF09587 Bacterial capsule synthesis protein PGA_cap TF3313_RS08215 PF00132 Bacterial transferase hexapeptide (six repeats) TF3313_RS08220 PF01165 Ribosomal protein S21 TF3313_RS08225 PF02899 Phage integrase, N-terminal SAM-like domain TF3313_RS08225 PF00589 Phage integrase family TF3313_RS08245 PF03143 Elongation factor Tu C-terminal domain TF3313_RS08245 PF03144 Elongation factor Tu domain 2 TF3313_RS08245 PF00009 Elongation factor Tu GTP binding domain TF3313_RS08260 PF00467 KOW motif TF3313_RS08260 PF02357 Transcription termination factor nusG TF3313_RS08265 PF00298 Ribosomal protein L11, RNA binding domain TF3313_RS08265 PF03946 Ribosomal protein L11, N-terminal domain TF3313_RS08270 PF00687 Ribosomal protein L1p/L10e family TF3313_RS08275 PF00466 Ribosomal protein L10 TF3313_RS08280 PF00542 Ribosomal protein L7/L12 C-terminal domain TF3313_RS08280 PF16320 Ribosomal protein L7/L12 dimerisation domain TF3313_RS08285 PF04565 RNA polymerase Rpb2, domain 3 TF3313_RS08285 PF10385 RNA polymerase beta subunit external 1 domain TF3313_RS08285 PF00562 RNA polymerase Rpb2, domain 6 TF3313_RS08285 PF04560 RNA polymerase Rpb2, domain 7 TF3313_RS08285 PF04563 RNA polymerase beta subunit TF3313_RS08285 PF04561 RNA polymerase Rpb2, domain 2 TF3313_RS08290 PF04983 RNA polymerase Rpb1, domain 3 TF3313_RS08290 PF04997 RNA polymerase Rpb1, domain 1 TF3313_RS08290 PF00623 RNA polymerase Rpb1, domain 2 TF3313_RS08290 PF04998 RNA polymerase Rpb1, domain 5 TF3313_RS08290 PF05000 RNA polymerase Rpb1, domain 4 TF3313_RS08295 PF05872 Bacterial protein of unknown function (DUF853) TF3313_RS08300 PF00425 chorismate binding enzyme TF3313_RS08305 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TF3313_RS08310 PF00378 Enoyl-CoA hydratase/isomerase TF3313_RS08315 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain TF3313_RS08315 PF13378 Enolase C-terminal domain-like TF3313_RS08325 PF00593 TonB dependent receptor TF3313_RS08325 PF07715 TonB-dependent Receptor Plug Domain TF3313_RS08330 PF02899 Phage integrase, N-terminal SAM-like domain TF3313_RS08330 PF00589 Phage integrase family TF3313_RS08340 PF04851 Type III restriction enzyme, res subunit TF3313_RS08340 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) TF3313_RS08340 PF00271 Helicase conserved C-terminal domain TF3313_RS08340 PF08463 EcoEI R protein C-terminal TF3313_RS08345 PF12161 HsdM N-terminal domain TF3313_RS08345 PF02384 N-6 DNA Methylase TF3313_RS08350 PF17761 DUF1016 N-terminal domain TF3313_RS08350 PF06250 YhcG PDDEXK nuclease domain TF3313_RS08355 PF01420 Type I restriction modification DNA specificity domain TF3313_RS08375 PF01420 Type I restriction modification DNA specificity domain TF3313_RS08425 PF01261 Xylose isomerase-like TIM barrel TF3313_RS08455 PF11941 Domain of unknown function (DUF3459) TF3313_RS08455 PF00128 Alpha amylase, catalytic domain TF3313_RS08495 PF02590 Predicted SPOUT methyltransferase TF3313_RS08505 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain TF3313_RS08505 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain TF3313_RS08520 PF00132 Bacterial transferase hexapeptide (six repeats) TF3313_RS08525 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TF3313_RS08545 PF14493 Helix-turn-helix domain TF3313_RS08545 PF05970 PIF1-like helicase TF3313_RS08560 PF00512 His Kinase A (phospho-acceptor) domain TF3313_RS08560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TF3313_RS08565 PF00486 Transcriptional regulatory protein, C terminal TF3313_RS08565 PF00072 Response regulator receiver domain TF3313_RS08590 PF07715 TonB-dependent Receptor Plug Domain TF3313_RS08590 PF00593 TonB dependent receptor TF3313_RS08595 PF07980 SusD family TF3313_RS08595 PF14322 Starch-binding associating with outer membrane TF3313_RS08605 PF00106 short chain dehydrogenase TF3313_RS08620 PF02503 Polyphosphate kinase middle domain TF3313_RS08620 PF13090 Polyphosphate kinase C-terminal domain 2 TF3313_RS08620 PF17941 Polyphosphate kinase C-terminal domain 1 TF3313_RS08620 PF13089 Polyphosphate kinase N-terminal domain TF3313_RS08625 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF TF3313_RS08625 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF TF3313_RS08625 PF01189 16S rRNA methyltransferase RsmB/F TF3313_RS08630 PF00884 Sulfatase TF3313_RS08635 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase TF3313_RS08640 PF01264 Chorismate synthase TF3313_RS08645 PF13180 PDZ domain TF3313_RS08660 PF02163 Peptidase family M50 TF3313_RS08660 PF17820 PDZ domain TF3313_RS08665 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain TF3313_RS08665 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase TF3313_RS08665 PF13288 DXP reductoisomerase C-terminal domain TF3313_RS08670 PF01551 Peptidase family M23 TF3313_RS08675 PF01782 RimM N-terminal domain TF3313_RS08685 PF01964 Radical SAM ThiC family TF3313_RS08685 PF13667 ThiC-associated domain TF3313_RS08690 PF16921 Tex protein YqgF-like domain TF3313_RS08690 PF17674 HHH domain TF3313_RS08690 PF09371 Tex-like protein N-terminal domain TF3313_RS08690 PF00575 S1 RNA binding domain TF3313_RS08705 PF07690 Major Facilitator Superfamily TF3313_RS08725 PF00478 IMP dehydrogenase / GMP reductase domain TF3313_RS08725 PF00571 CBS domain TF3313_RS08730 PF04023 FeoA domain TF3313_RS08730 PF07664 Ferrous iron transport protein B C terminus TF3313_RS08730 PF17910 FeoB cytosolic helical domain TF3313_RS08730 PF07670 Nucleoside recognition TF3313_RS08730 PF02421 Ferrous iron transport protein B TF3313_RS08740 PF13492 GAF domain TF3313_RS08740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TF3313_RS08740 PF06580 Histidine kinase TF3313_RS08740 PF07694 5TMR of 5TMR-LYT TF3313_RS08745 PF04397 LytTr DNA-binding domain TF3313_RS08745 PF00072 Response regulator receiver domain TF3313_RS08800 PF02899 Phage integrase, N-terminal SAM-like domain TF3313_RS08800 PF00589 Phage integrase family TF3313_RS08805 PF00589 Phage integrase family TF3313_RS08810 PF00589 Phage integrase family TF3313_RS08810 PF02899 Phage integrase, N-terminal SAM-like domain TF3313_RS08825 PF03952 Enolase, N-terminal domain TF3313_RS08825 PF00113 Enolase, C-terminal TIM barrel domain TF3313_RS08835 PF00258 Flavodoxin TF3313_RS08855 PF02514 CobN/Magnesium Chelatase TF3313_RS08860 PF00593 TonB dependent receptor TF3313_RS08860 PF07715 TonB-dependent Receptor Plug Domain TF3313_RS08865 PF07715 TonB-dependent Receptor Plug Domain TF3313_RS08865 PF00593 TonB dependent receptor TF3313_RS08880 PF00317 Ribonucleotide reductase, all-alpha domain TF3313_RS08880 PF02867 Ribonucleotide reductase, barrel domain TF3313_RS08880 PF03477 ATP cone domain TF3313_RS08885 PF00268 Ribonucleotide reductase, small chain TF3313_RS08905 PF07075 Protein of unknown function (DUF1343) TF3313_RS08915 PF00572 Ribosomal protein L13 TF3313_RS08920 PF00380 Ribosomal protein S9/S16 TF3313_RS08925 PF00318 Ribosomal protein S2 TF3313_RS08930 PF00889 Elongation factor TS TF3313_RS08935 PF00005 ABC transporter TF3313_RS08975 PF07715 TonB-dependent Receptor Plug Domain TF3313_RS08975 PF00593 TonB dependent receptor TF3313_RS08980 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain TF3313_RS08980 PF02142 MGS-like domain TF3313_RS08980 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain TF3313_RS08995 PF00999 Sodium/hydrogen exchanger family TF3313_RS08995 PF02254 TrkA-N domain TF3313_RS09005 PF01256 Carbohydrate kinase TF3313_RS09025 PF00013 KH domain TF3313_RS09025 PF12072 Domain of unknown function (DUF3552) TF3313_RS09025 PF01966 HD domain TF3313_RS09030 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain TF3313_RS09030 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family TF3313_RS09035 PF12848 ABC transporter TF3313_RS09035 PF00005 ABC transporter TF3313_RS09045 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase TF3313_RS09050 PF16363 GDP-mannose 4,6 dehydratase TF3313_RS09055 PF13662 Toprim domain TF3313_RS09055 PF02132 RecR protein TF3313_RS09070 PF01555 DNA methylase TF3313_RS09085 PF03167 Uracil DNA glycosylase superfamily TF3313_RS09100 PF07075 Protein of unknown function (DUF1343) TF3313_RS09105 PF00970 Oxidoreductase FAD-binding domain TF3313_RS09105 PF00175 Oxidoreductase NAD-binding domain TF3313_RS09105 PF00111 2Fe-2S iron-sulfur cluster binding domain TF3313_RS09110 PF02508 Rnf-Nqr subunit, membrane protein TF3313_RS09115 PF02508 Rnf-Nqr subunit, membrane protein TF3313_RS09120 PF04205 FMN-binding domain TF3313_RS09125 PF03116 NQR2, RnfD, RnfE family TF3313_RS09130 PF11973 NQRA C-terminal domain TF3313_RS09130 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) TF3313_RS09145 PF01551 Peptidase family M23 TF3313_RS09145 PF04225 Opacity-associated protein A LysM-like domain TF3313_RS09150 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain TF3313_RS09150 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III TF3313_RS09150 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I TF3313_RS09150 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II TF3313_RS09155 PF14489 QueF-like protein TF3313_RS09160 PF01018 GTP1/OBG TF3313_RS09160 PF01926 50S ribosome-binding GTPase TF3313_RS09170 PF00156 Phosphoribosyl transferase domain TF3313_RS09175 PF00005 ABC transporter TF3313_RS09185 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily TF3313_RS09200 PF00535 Glycosyl transferase family 2 TF3313_RS09210 PF00474 Sodium:solute symporter family TF3313_RS09215 PF06123 Inner membrane protein CreD TF3313_RS09235 PF00085 Thioredoxin TF3313_RS09240 PF00849 RNA pseudouridylate synthase TF3313_RS09245 PF00144 Beta-lactamase TF3313_RS09255 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal TF3313_RS09255 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III TF3313_RS09260 PF17932 Tetracyclin repressor-like, C-terminal domain TF3313_RS09260 PF00440 Bacterial regulatory proteins, tetR family TF3313_RS09285 PF00933 Glycosyl hydrolase family 3 N terminal domain TF3313_RS09285 PF14310 Fibronectin type III-like domain TF3313_RS09285 PF01915 Glycosyl hydrolase family 3 C-terminal domain TF3313_RS09290 PF00691 OmpA family TF3313_RS09295 PF02861 Clp amino terminal domain, pathogenicity island component TF3313_RS09295 PF00004 ATPase family associated with various cellular activities (AAA) TF3313_RS09295 PF07724 AAA domain (Cdc48 subfamily) TF3313_RS09295 PF17871 AAA lid domain TF3313_RS09295 PF10431 C-terminal, D2-small domain, of ClpB protein TF3313_RS09300 PF00814 Glycoprotease family TF3313_RS09340 PF00701 Dihydrodipicolinate synthetase family TF3313_RS09350 PF07690 Major Facilitator Superfamily TF3313_RS09355 PF00593 TonB dependent receptor TF3313_RS09355 PF07715 TonB-dependent Receptor Plug Domain TF3313_RS09360 PF14322 Starch-binding associating with outer membrane TF3313_RS09360 PF07980 SusD family TF3313_RS09365 PF13859 BNR repeat-like domain TF3313_RS09365 PF14873 N-terminal domain of BNR-repeat neuraminidase TF3313_RS09370 PF00728 Glycosyl hydrolase family 20, catalytic domain TF3313_RS09370 PF07691 PA14 domain TF3313_RS09370 PF02838 Glycosyl hydrolase family 20, domain 2 TF3313_RS09380 PF01344 Kelch motif TF3313_RS09395 PF00593 TonB dependent receptor TF3313_RS09395 PF07715 TonB-dependent Receptor Plug Domain TF3313_RS09400 PF06180 Cobalt chelatase (CbiK) TF3313_RS09415 PF07715 TonB-dependent Receptor Plug Domain TF3313_RS09415 PF00593 TonB dependent receptor TF3313_RS09420 PF02424 ApbE family TF3313_RS09435 PF07698 7TM receptor with intracellular HD hydrolase TF3313_RS09435 PF07697 7TM-HD extracellular TF3313_RS09435 PF01966 HD domain TF3313_RS09520 PF16363 GDP-mannose 4,6 dehydratase TF3313_RS09560 PF12849 PBP superfamily domain TF3313_RS09565 PF00485 Phosphoribulokinase / Uridine kinase family TF3313_RS09585 PF00005 ABC transporter TF3313_RS09590 PF00005 ABC transporter TF3313_RS09615 PF16411 Outer membrane protein SusF_SusE TF3313_RS09615 PF14292 SusE outer membrane protein TF3313_RS09620 PF07980 SusD family TF3313_RS09625 PF07715 TonB-dependent Receptor Plug Domain TF3313_RS09625 PF00593 TonB dependent receptor TF3313_RS09630 PF14508 Glycosyl-hydrolase 97 N-terminal TF3313_RS09630 PF10566 Glycoside hydrolase 97 TF3313_RS09630 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation TF3313_RS09635 PF08241 Methyltransferase domain TF3313_RS09640 PF01702 Queuine tRNA-ribosyltransferase TF3313_RS09650 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase TF3313_RS09660 PF00301 Rubredoxin TF3313_RS09665 PF03466 LysR substrate binding domain TF3313_RS09665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TF3313_RS09675 PF00924 Mechanosensitive ion channel TF3313_RS09680 PF00899 ThiF family TF3313_RS09690 PF07470 Glycosyl Hydrolase Family 88 TF3313_RS09695 PF07715 TonB-dependent Receptor Plug Domain TF3313_RS09695 PF00593 TonB dependent receptor TF3313_RS09705 PF04962 KduI/IolB family TF3313_RS09710 PF16153 Domain of unknown function (DUF4861) TF3313_RS09715 PF00884 Sulfatase TF3313_RS09740 PF07690 Major Facilitator Superfamily TF3313_RS09815 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase TF3313_RS09825 PF02601 Exonuclease VII, large subunit TF3313_RS09825 PF13742 OB-fold nucleic acid binding domain TF3313_RS09835 PF03590 Aspartate-ammonia ligase TF3313_RS09840 PF00120 Glutamine synthetase, catalytic domain TF3313_RS09840 PF12437 Glutamine synthetase type III N terminal TF3313_RS09840 PF18318 Glutamine synthetase C-terminal domain TF3313_RS09845 PF02540 NAD synthase TF3313_RS09845 PF00795 Carbon-nitrogen hydrolase TF3313_RS09850 PF01734 Patatin-like phospholipase TF3313_RS09860 PF02677 Epoxyqueuosine reductase QueH TF3313_RS09865 PF04371 Porphyromonas-type peptidyl-arginine deiminase TF3313_RS09870 PF00795 Carbon-nitrogen hydrolase TF3313_RS09905 PF00270 DEAD/DEAH box helicase TF3313_RS09905 PF18395 Cas3 C-terminal domain TF3313_RS09905 PF18019 HD domain TF3313_RS09915 PF12728 Helix-turn-helix domain TF3313_RS09915 PF02661 Fic/DOC family TF3313_RS09930 PF18211 Csm1 subunit domain B TF3313_RS09940 PF03787 RAMP superfamily TF3313_RS10010 PF10135 Rod binding protein TF3313_RS10010 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase TF3313_RS10085 PF10548 P22AR C-terminal domain TF3313_RS10085 PF02498 BRO family, N-terminal domain TF3313_RS10200 PF01867 CRISPR associated protein Cas1 TF3313_RS10205 PF09827 CRISPR associated protein Cas2 TF3313_RS10235 PF00210 Ferritin-like domain TF3313_RS10240 PF03030 Inorganic H+ pyrophosphatase TF3313_RS10245 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain TF3313_RS10250 PF00580 UvrD/REP helicase N-terminal domain TF3313_RS10250 PF13361 UvrD-like helicase C-terminal domain TF3313_RS10255 PF00216 Bacterial DNA-binding protein TF3313_RS10260 PF02152 Dihydroneopterin aldolase TF3313_RS10270 PF02446 4-alpha-glucanotransferase TF3313_RS10275 PF02867 Ribonucleotide reductase, barrel domain TF3313_RS10275 PF00317 Ribonucleotide reductase, all-alpha domain TF3313_RS10275 PF03477 ATP cone domain TF3313_RS10280 PF00037 4Fe-4S binding domain TF3313_RS10295 PF01434 Peptidase family M41 TF3313_RS10295 PF17862 AAA+ lid domain TF3313_RS10295 PF00004 ATPase family associated with various cellular activities (AAA) TF3313_RS10320 PF12354 Bacterial adhesion/invasion protein N terminal TF3313_RS10320 PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) TF3313_RS10320 PF00746 LPXTG cell wall anchor motif TF3313_RS10320 PF12799 Leucine Rich repeats (2 copies) TF3313_RS10320 PF08191 LRR adjacent TF3313_RS10330 PF00593 TonB dependent receptor TF3313_RS10330 PF07715 TonB-dependent Receptor Plug Domain TF3313_RS10340 PF03060 Nitronate monooxygenase TF3313_RS10350 PF08245 Mur ligase middle domain TF3313_RS10355 PF13638 PIN domain TF3313_RS10355 PF02562 PhoH-like protein TF3313_RS10360 PF01545 Cation efflux family TF3313_RS10360 PF16916 Dimerisation domain of Zinc Transporter TF3313_RS10365 PF06508 Queuosine biosynthesis protein QueC TF3313_RS10405 PF02441 Flavoprotein TF3313_RS10405 PF04127 DNA / pantothenate metabolism flavoprotein TF3313_RS10415 PF02463 RecF/RecN/SMC N terminal domain TF3313_RS10420 PF08032 RNA 2'-O ribose methyltransferase substrate binding TF3313_RS10420 PF00588 SpoU rRNA Methylase family TF3313_RS10425 PF00453 Ribosomal protein L20 TF3313_RS10430 PF01632 Ribosomal protein L35 TF3313_RS10435 PF00707 Translation initiation factor IF-3, C-terminal domain TF3313_RS10435 PF05198 Translation initiation factor IF-3, N-terminal domain TF3313_RS10440 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TF3313_RS10440 PF02824 TGS domain TF3313_RS10440 PF03129 Anticodon binding domain TF3313_RS10440 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain TF3313_RS10450 PF07687 Peptidase dimerisation domain TF3313_RS10450 PF01546 Peptidase family M20/M25/M40 TF3313_RS10465 PF01979 Amidohydrolase family TF3313_RS10470 PF00465 Iron-containing alcohol dehydrogenase TF3313_RS10490 PF02837 Glycosyl hydrolases family 2, sugar binding domain TF3313_RS10490 PF02836 Glycosyl hydrolases family 2, TIM barrel domain TF3313_RS10490 PF00703 Glycosyl hydrolases family 2 TF3313_RS10490 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 TF3313_RS10490 PF16355 Domain of unknown function (DUF4982) TF3313_RS10495 PF13419 Haloacid dehalogenase-like hydrolase TF3313_RS10510 PF09115 DNA polymerase III, delta subunit, C terminal TF3313_RS10515 PF02219 Methylenetetrahydrofolate reductase TF3313_RS10525 PF01554 MatE TF3313_RS10530 PF00593 TonB dependent receptor TF3313_RS10530 PF07715 TonB-dependent Receptor Plug Domain TF3313_RS10550 PF02350 UDP-N-acetylglucosamine 2-epimerase TF3313_RS10565 PF00154 recA bacterial DNA recombination protein TF3313_RS10570 PF00578 AhpC/TSA family TF3313_RS10575 PF16653 Saccharopine dehydrogenase C-terminal domain TF3313_RS10575 PF03435 Saccharopine dehydrogenase NADP binding domain TF3313_RS10590 PF07977 FabA-like domain TF3313_RS10595 PF00535 Glycosyl transferase family 2 TF3313_RS10660 PF05593 RHS Repeat TF3313_RS10660 PF03527 RHS protein TF3313_RS10670 PF05593 RHS Repeat TF3313_RS10670 PF03527 RHS protein TF3313_RS10700 PF12706 Beta-lactamase superfamily domain TF3313_RS10715 PF07715 TonB-dependent Receptor Plug Domain TF3313_RS10715 PF00593 TonB dependent receptor TF3313_RS10745 PF00842 Alanine racemase, C-terminal domain TF3313_RS10745 PF01168 Alanine racemase, N-terminal domain TF3313_RS10755 PF01551 Peptidase family M23 TF3313_RS10755 PF04225 Opacity-associated protein A LysM-like domain TF3313_RS10770 PF00121 Triosephosphate isomerase TF3313_RS10780 PF01227 GTP cyclohydrolase I TF3313_RS10785 PF01300 Telomere recombination TF3313_RS10800 PF03577 Peptidase family C69 TF3313_RS10810 PF07715 TonB-dependent Receptor Plug Domain TF3313_RS10810 PF00593 TonB dependent receptor TF3313_RS10820 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase TF3313_RS10820 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase TF3313_RS10825 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase TF3313_RS10825 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase TF3313_RS10830 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase TF3313_RS10830 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase TF3313_RS10875 PF00593 TonB dependent receptor TF3313_RS10875 PF07715 TonB-dependent Receptor Plug Domain TF3313_RS10885 PF07715 TonB-dependent Receptor Plug Domain TF3313_RS10885 PF00593 TonB dependent receptor TF3313_RS10890 PF04052 TolB amino-terminal domain TF3313_RS10890 PF07676 WD40-like Beta Propeller Repeat TF3313_RS10895 PF01979 Amidohydrolase family TF3313_RS10900 PF00535 Glycosyl transferase family 2 TF3313_RS10905 PF02638 Glycosyl hydrolase-like 10 TF3313_RS10910 PF01370 NAD dependent epimerase/dehydratase family TF3313_RS10920 PF01476 LysM domain TF3313_RS10920 PF01520 N-acetylmuramoyl-L-alanine amidase TF3313_RS10930 PF01476 LysM domain TF3313_RS10930 PF01464 Transglycosylase SLT domain TF3313_RS10935 PF17755 UvrA DNA-binding domain TF3313_RS10935 PF17760 UvrA interaction domain TF3313_RS10935 PF00005 ABC transporter TF3313_RS10945 PF09186 Domain of unknown function (DUF1949) TF3313_RS10945 PF01205 Uncharacterized protein family UPF0029 TF3313_RS10955 PF01321 Creatinase/Prolidase N-terminal domain TF3313_RS10955 PF00557 Metallopeptidase family M24 TF3313_RS10960 PF00245 Alkaline phosphatase TF3313_RS10980 PF00413 Matrixin TF3313_RS10990 PF00413 Matrixin TF3313_RS10995 PF00413 Matrixin TF3313_RS11005 PF00413 Matrixin TF3313_RS11035 PF02638 Glycosyl hydrolase-like 10 TF3313_RS11045 PF07992 Pyridine nucleotide-disulphide oxidoreductase TF3313_RS11055 PF17854 FtsK alpha domain TF3313_RS11055 PF01580 FtsK/SpoIIIE family TF3313_RS11055 PF09397 Ftsk gamma domain TF3313_RS11055 PF13491 4TM region of DNA translocase FtsK/SpoIIIE TF3313_RS11060 PF01336 OB-fold nucleic acid binding domain TF3313_RS11060 PF02938 GAD domain TF3313_RS11060 PF00152 tRNA synthetases class II (D, K and N) TF3313_RS11065 PF01784 NIF3 (NGG1p interacting factor 3) TF3313_RS11075 PF01171 PP-loop family TF3313_RS11075 PF11734 TilS substrate C-terminal domain TF3313_RS11080 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TF3313_RS11080 PF07497 Rho termination factor, RNA-binding domain TF3313_RS11085 PF10417 C-terminal domain of 1-Cys peroxiredoxin TF3313_RS11085 PF00578 AhpC/TSA family TF3313_RS11095 PF00196 Bacterial regulatory proteins, luxR family TF3313_RS11095 PF00072 Response regulator receiver domain TF3313_RS11100 PF02080 TrkA-C domain TF3313_RS11100 PF06826 Predicted Permease Membrane Region TF3313_RS11125 PF00682 HMGL-like TF3313_RS11125 PF02436 Conserved carboxylase domain TF3313_RS11130 PF02652 L-lactate permease TF3313_RS11135 PF02589 LUD domain TF3313_RS11140 PF13183 4Fe-4S dicluster domain TF3313_RS11140 PF11870 Domain of unknown function (DUF3390) TF3313_RS11140 PF02589 LUD domain TF3313_RS11145 PF02754 Cysteine-rich domain TF3313_RS11155 PF00293 NUDIX domain TF3313_RS11155 PF13344 Haloacid dehalogenase-like hydrolase TF3313_RS11180 PF00912 Transglycosylase TF3313_RS11185 PF03099 Biotin/lipoate A/B protein ligase family TF3313_RS11190 PF14109 GldH lipoprotein TF3313_RS11195 PF04468 PSP1 C-terminal conserved region TF3313_RS11200 PF00155 Aminotransferase class I and II TF3313_RS11205 PF05175 Methyltransferase small domain TF3313_RS11215 PF07687 Peptidase dimerisation domain TF3313_RS11215 PF01546 Peptidase family M20/M25/M40 TF3313_RS11220 PF01979 Amidohydrolase family TF3313_RS11265 PF00593 TonB dependent receptor TF3313_RS11265 PF07715 TonB-dependent Receptor Plug Domain TF3313_RS11270 PF07980 SusD family TF3313_RS11280 PF01642 Methylmalonyl-CoA mutase TF3313_RS11285 PF01642 Methylmalonyl-CoA mutase TF3313_RS11285 PF02310 B12 binding domain TF3313_RS11290 PF00005 ABC transporter TF3313_RS11290 PF16326 ABC transporter C-terminal domain TF3313_RS11290 PF12848 ABC transporter TF3313_RS11300 PF02348 Cytidylyltransferase TF3313_RS11305 PF14849 YidC periplasmic domain TF3313_RS11305 PF02096 60Kd inner membrane protein TF3313_RS11310 PF00117 Glutamine amidotransferase class-I TF3313_RS11310 PF06418 CTP synthase N-terminus TF3313_RS11315 PF01624 MutS domain I TF3313_RS11315 PF05192 MutS domain III TF3313_RS11315 PF05190 MutS family domain IV TF3313_RS11315 PF00488 MutS domain V TF3313_RS11315 PF05188 MutS domain II TF3313_RS11330 PF04060 Putative Fe-S cluster TF3313_RS11330 PF00037 4Fe-4S binding domain TF3313_RS11330 PF13187 4Fe-4S dicluster domain TF3313_RS11335 PF10531 SLBB domain TF3313_RS11335 PF13375 RnfC Barrel sandwich hybrid domain TF3313_RS11335 PF13237 4Fe-4S dicluster domain TF3313_RS11335 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit TF3313_RS11340 PF03116 NQR2, RnfD, RnfE family TF3313_RS11345 PF04205 FMN-binding domain TF3313_RS11350 PF02508 Rnf-Nqr subunit, membrane protein TF3313_RS11355 PF02508 Rnf-Nqr subunit, membrane protein TF3313_RS11385 PF00860 Permease family TF3313_RS11395 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) TF3313_RS11395 PF00722 Glycosyl hydrolases family 16 TF3313_RS11405 PF16347 Domain of unknown function (DUF4976) TF3313_RS11405 PF00884 Sulfatase TF3313_RS11415 PF01923 Cobalamin adenosyltransferase TF3313_RS11420 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TF3313_RS11425 PF05175 Methyltransferase small domain TF3313_RS11430 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TF3313_RS11435 PF01888 CbiD TF3313_RS11440 PF00156 Phosphoribosyl transferase domain TF3313_RS11460 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion TF3313_RS11465 PF02321 Outer membrane efflux protein TF3313_RS11480 PF00854 POT family TF3313_RS11495 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain TF3313_RS11495 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain TF3313_RS11505 PF07715 TonB-dependent Receptor Plug Domain TF3313_RS11505 PF00593 TonB dependent receptor TF3313_RS11525 PF02782 FGGY family of carbohydrate kinases, C-terminal domain TF3313_RS11525 PF00370 FGGY family of carbohydrate kinases, N-terminal domain TF3313_RS11530 PF01261 Xylose isomerase-like TIM barrel TF3313_RS11535 PF00083 Sugar (and other) transporter TF3313_RS11555 PF00593 TonB dependent receptor TF3313_RS11555 PF07715 TonB-dependent Receptor Plug Domain TF3313_RS11570 PF00395 S-layer homology domain TF3313_RS11570 PF02368 Bacterial Ig-like domain (group 2) TF3313_RS11570 PF02638 Glycosyl hydrolase-like 10 TF3313_RS11620 PF00696 Amino acid kinase family TF3313_RS11625 PF11842 Domain of unknown function (DUF3362) TF3313_RS11625 PF04055 Radical SAM superfamily TF3313_RS11625 PF08497 Radical SAM N-terminal TF3313_RS11630 PF08544 GHMP kinases C terminal TF3313_RS11630 PF00288 GHMP kinases N terminal domain TF3313_RS11635 PF00270 DEAD/DEAH box helicase TF3313_RS11635 PF00271 Helicase conserved C-terminal domain TF3313_RS11640 PF01464 Transglycosylase SLT domain TF3313_RS11640 PF00497 Bacterial extracellular solute-binding proteins, family 3 TF3313_RS11690 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain TF3313_RS11690 PF00749 tRNA synthetases class I (E and Q), catalytic domain TF3313_RS11695 PF02769 AIR synthase related protein, C-terminal domain TF3313_RS11695 PF00586 AIR synthase related protein, N-terminal domain TF3313_RS11700 PF02606 Tetraacyldisaccharide-1-P 4'-kinase TF3313_RS11705 PF01343 Peptidase family S49 TF3313_RS11710 PF01554 MatE TF3313_RS11720 PF00326 Prolyl oligopeptidase family TF3313_RS11720 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain TF3313_RS11730 PF00512 His Kinase A (phospho-acceptor) domain TF3313_RS11730 PF12833 Helix-turn-helix domain TF3313_RS11730 PF07494 Two component regulator propeller TF3313_RS11730 PF00072 Response regulator receiver domain TF3313_RS11730 PF07495 Y_Y_Y domain TF3313_RS11730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TF3313_RS11765 PF02368 Bacterial Ig-like domain (group 2) TF3313_RS11775 PF02368 Bacterial Ig-like domain (group 2) TF3313_RS11780 PF02347 Glycine cleavage system P-protein TF3313_RS11785 PF00753 Metallo-beta-lactamase superfamily TF3313_RS11790 PF02527 rRNA small subunit methyltransferase G TF3313_RS11800 PF00521 DNA gyrase/topoisomerase IV, subunit A TF3313_RS11800 PF03989 DNA gyrase C-terminal domain, beta-propeller TF3313_RS11820 PF01569 PAP2 superfamily TF3313_RS11840 PF13519 von Willebrand factor type A domain TF3313_RS11840 PF07584 Aerotolerance regulator N-terminal TF3313_RS11845 PF13519 von Willebrand factor type A domain TF3313_RS11855 PF01882 Protein of unknown function DUF58 TF3313_RS11860 PF17863 AAA lid domain TF3313_RS11860 PF07726 ATPase family associated with various cellular activities (AAA) TF3313_RS11870 PF00216 Bacterial DNA-binding protein TF3313_RS11875 PF00919 Uncharacterized protein family UPF0004 TF3313_RS11875 PF18693 TRAM domain TF3313_RS11875 PF04055 Radical SAM superfamily TF3313_RS11880 PF02881 SRP54-type protein, helical bundle domain TF3313_RS11880 PF00448 SRP54-type protein, GTPase domain TF3313_RS11925 PF01048 Phosphorylase superfamily TF3313_RS11925 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus TF3313_RS11940 PF00331 Glycosyl hydrolase family 10 TF3313_RS11940 PF07859 alpha/beta hydrolase fold TF3313_RS11945 PF10150 Ribonuclease E/G family TF3313_RS11945 PF00575 S1 RNA binding domain TF3313_RS11950 PF00216 Bacterial DNA-binding protein TF3313_RS11955 PF14815 NUDIX domain TF3313_RS11955 PF00730 HhH-GPD superfamily base excision DNA repair protein TF3313_RS11955 PF00633 Helix-hairpin-helix motif TF3313_RS11960 PF00436 Single-strand binding protein family TF3313_RS11965 PF03471 Transporter associated domain TF3313_RS11965 PF00571 CBS domain TF3313_RS11980 PF02368 Bacterial Ig-like domain (group 2) TF3313_RS11990 PF03786 D-mannonate dehydratase (UxuA) TF3313_RS11995 PF14322 Starch-binding associating with outer membrane TF3313_RS11995 PF07980 SusD family TF3313_RS12000 PF07715 TonB-dependent Receptor Plug Domain TF3313_RS12000 PF00593 TonB dependent receptor TF3313_RS12015 PF01370 NAD dependent epimerase/dehydratase family TF3313_RS12020 PF01569 PAP2 superfamily TF3313_RS12040 PF02894 Oxidoreductase family, C-terminal alpha/beta domain TF3313_RS12040 PF01408 Oxidoreductase family, NAD-binding Rossmann fold TF3313_RS12045 PF01571 Aminomethyltransferase folate-binding domain TF3313_RS12045 PF08669 Glycine cleavage T-protein C-terminal barrel domain TF3313_RS12050 PF07687 Peptidase dimerisation domain TF3313_RS12050 PF01546 Peptidase family M20/M25/M40 TF3313_RS12060 PF00535 Glycosyl transferase family 2 TF3313_RS12075 PF01252 Signal peptidase (SPase) II TF3313_RS12085 PF00133 tRNA synthetases class I (I, L, M and V) TF3313_RS12085 PF08264 Anticodon-binding domain of tRNA TF3313_RS12095 PF03641 Possible lysine decarboxylase TF3313_RS12100 PF01066 CDP-alcohol phosphatidyltransferase TF3313_RS12115 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain TF3313_RS12115 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain TF3313_RS12115 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain TF3313_RS12120 PF00483 Nucleotidyl transferase TF3313_RS12120 PF01050 Mannose-6-phosphate isomerase TF3313_RS12135 PF07971 Glycosyl hydrolase family 92 TF3313_RS12135 PF17678 Glycosyl hydrolase family 92 N-terminal domain TF3313_RS12140 PF08501 Shikimate dehydrogenase substrate binding domain TF3313_RS12140 PF01488 Shikimate / quinate 5-dehydrogenase TF3313_RS12140 PF18317 Shikimate 5'-dehydrogenase C-terminal domain TF3313_RS12145 PF01209 ubiE/COQ5 methyltransferase family TF3313_RS12150 PF01259 SAICAR synthetase TF3313_RS12155 PF02562 PhoH-like protein TF3313_RS12165 PF00557 Metallopeptidase family M24 TF3313_RS12165 PF05195 Aminopeptidase P, N-terminal domain TF3313_RS12215 PF16355 Domain of unknown function (DUF4982) TF3313_RS12215 PF02837 Glycosyl hydrolases family 2, sugar binding domain TF3313_RS12215 PF02836 Glycosyl hydrolases family 2, TIM barrel domain TF3313_RS12215 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 TF3313_RS12215 PF00703 Glycosyl hydrolases family 2 TF3313_RS12225 PF03144 Elongation factor Tu domain 2 TF3313_RS12225 PF00679 Elongation factor G C-terminus TF3313_RS12225 PF00009 Elongation factor Tu GTP binding domain TF3313_RS12225 PF06421 GTP-binding protein LepA C-terminus TF3313_RS12230 PF07715 TonB-dependent Receptor Plug Domain TF3313_RS12230 PF00593 TonB dependent receptor TF3313_RS12235 PF07980 SusD family TF3313_RS12235 PF14322 Starch-binding associating with outer membrane TF3313_RS12240 PF00497 Bacterial extracellular solute-binding proteins, family 3 TF3313_RS12240 PF01464 Transglycosylase SLT domain TF3313_RS12245 PF05958 tRNA (Uracil-5-)-methyltransferase TF3313_RS12245 PF01938 TRAM domain TF3313_RS12250 PF00391 PEP-utilising enzyme, mobile domain TF3313_RS12250 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain TF3313_RS12250 PF02896 PEP-utilising enzyme, TIM barrel domain TF3313_RS12280 PF14032 PknH-like extracellular domain TF3313_RS12280 PF00069 Protein kinase domain TF3313_RS12295 PF07715 TonB-dependent Receptor Plug Domain TF3313_RS12295 PF00593 TonB dependent receptor TF3313_RS12315 PF00155 Aminotransferase class I and II TF3313_RS12340 PF01668 SmpB protein TF3313_RS12360 PF00719 Inorganic pyrophosphatase TF3313_RS12370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TF3313_RS12370 PF00672 HAMP domain TF3313_RS12390 PF02390 Putative methyltransferase TF3313_RS12395 PF01883 Iron-sulfur cluster assembly protein TF3313_RS12395 PF10609 NUBPL iron-transfer P-loop NTPase TF3313_RS12405 PF03572 Peptidase family S41 TF3313_RS12405 PF13180 PDZ domain TF3313_RS12410 PF00294 pfkB family carbohydrate kinase TF3313_RS12440 PF08019 Phosphoethanolamine transferase EptA/EptB TF3313_RS12440 PF00884 Sulfatase TF3313_RS12465 PF02954 Bacterial regulatory protein, Fis family TF3313_RS12465 PF00158 Sigma-54 interaction domain TF3313_RS12465 PF06490 Flagellar regulatory protein FleQ TF3313_RS12485 PF01467 Cytidylyltransferase-like TF3313_RS12490 PF04166 Pyridoxal phosphate biosynthetic protein PdxA TF3313_RS12500 PF04055 Radical SAM superfamily TF3313_RS12530 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase TF3313_RS12535 PF07516 SecA Wing and Scaffold domain TF3313_RS12535 PF01043 SecA preprotein cross-linking domain TF3313_RS12535 PF07517 SecA DEAD-like domain TF3313_RS12535 PF02810 SEC-C motif TF3313_RS12540 PF07495 Y_Y_Y domain TF3313_RS12540 PF00072 Response regulator receiver domain TF3313_RS12540 PF07494 Two component regulator propeller TF3313_RS12540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TF3313_RS12540 PF12833 Helix-turn-helix domain TF3313_RS12540 PF00512 His Kinase A (phospho-acceptor) domain TF3313_RS12550 PF01327 Polypeptide deformylase TF3313_RS12555 PF03652 Holliday junction resolvase TF3313_RS12560 PF02397 Bacterial sugar transferase TF3313_RS12570 PF02881 SRP54-type protein, helical bundle domain TF3313_RS12570 PF02978 Signal peptide binding domain TF3313_RS12570 PF00448 SRP54-type protein, GTPase domain TF3313_RS12575 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain TF3313_RS12575 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain TF3313_RS12580 PF02687 FtsX-like permease family TF3313_RS12580 PF12704 MacB-like periplasmic core domain TF3313_RS12585 PF00155 Aminotransferase class I and II TF3313_RS12595 PF07992 Pyridine nucleotide-disulphide oxidoreductase TF3313_RS12595 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain TF3313_RS12610 PF01053 Cys/Met metabolism PLP-dependent enzyme TF3313_RS12620 PF10410 DnaB-helicase binding domain of primase TF3313_RS12620 PF01807 CHC2 zinc finger TF3313_RS12620 PF08275 DNA primase catalytic core, N-terminal domain TF3313_RS12680 PF00004 ATPase family associated with various cellular activities (AAA) TF3313_RS12680 PF05362 Lon protease (S16) C-terminal proteolytic domain TF3313_RS12680 PF02190 ATP-dependent protease La (LON) substrate-binding domain TF3313_RS12685 PF00326 Prolyl oligopeptidase family TF3313_RS12685 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain TF3313_RS12695 PF00326 Prolyl oligopeptidase family TF3313_RS12695 PF07676 WD40-like Beta Propeller Repeat TF3313_RS12695 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region TF3313_RS12700 PF02545 Maf-like protein TF3313_RS12705 PF01370 NAD dependent epimerase/dehydratase family TF3313_RS12715 PF16363 GDP-mannose 4,6 dehydratase TF3313_RS12720 PF14693 Ribosomal protein TL5, C-terminal domain TF3313_RS12720 PF01386 Ribosomal L25p family TF3313_RS12725 PF01195 Peptidyl-tRNA hydrolase TF3313_RS12730 PF01479 S4 domain TF3313_RS12795 PF10502 Signal peptidase, peptidase S26 TF3313_RS12800 PF00005 ABC transporter TF3313_RS12800 PF00664 ABC transporter transmembrane region TF3313_RS12845 PF07549 SecD/SecF GG Motif TF3313_RS12845 PF02355 Protein export membrane protein TF3313_RS12865 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg TF3313_RS12865 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TF3313_RS12865 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II TF3313_RS12865 PF10371 Domain of unknown function TF3313_RS12865 PF12838 4Fe-4S dicluster domain TF3313_RS12865 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase TF3313_RS12880 PF01063 Amino-transferase class IV TF3313_RS12885 PF15975 Flotillin TF3313_RS12885 PF01145 SPFH domain / Band 7 family TF3313_RS12905 PF06826 Predicted Permease Membrane Region TF3313_RS12905 PF02080 TrkA-C domain TF3313_RS12940 PF00873 AcrB/AcrD/AcrF family TF3313_RS12970 PF04452 RNA methyltransferase TF3313_RS12980 PF03631 Virulence factor BrkB TF3313_RS12985 PF13840 ACT domain TF3313_RS12985 PF03447 Homoserine dehydrogenase, NAD binding domain TF3313_RS12985 PF00696 Amino acid kinase family TF3313_RS12985 PF00742 Homoserine dehydrogenase TF3313_RS12985 PF01842 ACT domain TF3313_RS12990 PF10143 2,3-bisphosphoglycerate-independent phosphoglycerate mutase TF3313_RS12990 PF01676 Metalloenzyme superfamily TF3313_RS13000 PF16199 Radical_SAM C-terminal domain TF3313_RS13000 PF04055 Radical SAM superfamily TF3313_RS13015 PF02585 GlcNAc-PI de-N-acetylase TF3313_RS13015 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase TF3313_RS13020 PF17764 3′ DNA-binding domain (3′BD) TF3313_RS13020 PF00271 Helicase conserved C-terminal domain TF3313_RS13020 PF18319 PriA DNA helicase Cys-rich region (CRR) domain TF3313_RS13020 PF04851 Type III restriction enzyme, res subunit TF3313_RS13020 PF18074 Primosomal protein N C-terminal domain TF3313_RS13035 PF01661 Macro domain TF3313_RS13050 PF04304 Protein of unknown function (DUF454) TF3313_RS13055 PF04389 Peptidase family M28 TF3313_RS13055 PF04151 Bacterial pre-peptidase C-terminal domain TF3313_RS13065 PF00881 Nitroreductase family TF3313_RS13070 PF13193 AMP-binding enzyme C-terminal domain TF3313_RS13070 PF00501 AMP-binding enzyme TF3313_RS13105 PF00440 Bacterial regulatory proteins, tetR family TF3313_RS13155 PF13635 Domain of unknown function (DUF4143) TF3313_RS13155 PF13173 AAA domain TF3313_RS13180 PF01926 50S ribosome-binding GTPase TF3313_RS13180 PF04055 Radical SAM superfamily TF3313_RS13180 PF01018 GTP1/OBG TF3313_RS13255 PF10135 Rod binding protein TF3313_RS13255 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase TF3313_RS13270 PF00574 Clp protease TF3313_RS13290 PF06074 Protein of unknown function (DUF935) TF3313_RS13505 PF13614 AAA domain TF3313_RS13520 PF02796 Helix-turn-helix domain of resolvase TF3313_RS13520 PF00239 Resolvase, N terminal domain TF3313_RS13570 PF04225 Opacity-associated protein A LysM-like domain TF3313_RS13570 PF01551 Peptidase family M23 TF3313_RS13585 PF13635 Domain of unknown function (DUF4143) TF3313_RS13585 PF13173 AAA domain TF3313_RS13615 PF02463 RecF/RecN/SMC N terminal domain TF3313_RS13650 PF01483 Proprotein convertase P-domain TF3313_RS13665 PF01479 S4 domain TF3313_RS13665 PF00849 RNA pseudouridylate synthase TF3313_RS13670 PF01820 D-ala D-ala ligase N-terminus TF3313_RS13670 PF07478 D-ala D-ala ligase C-terminus TF3313_RS13680 PF06971 Putative DNA-binding protein N-terminus TF3313_RS13680 PF02629 CoA binding domain TF3313_RS13685 PF01557 Fumarylacetoacetate (FAA) hydrolase family TF3313_RS13705 PF07676 WD40-like Beta Propeller Repeat TF3313_RS13705 PF03572 Peptidase family S41 TF3313_RS13705 PF14684 Tricorn protease C1 domain TF3313_RS13705 PF14685 Tricorn protease PDZ domain TF3313_RS13710 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 TF3313_RS13710 PF02837 Glycosyl hydrolases family 2, sugar binding domain TF3313_RS13710 PF16355 Domain of unknown function (DUF4982) TF3313_RS13710 PF02836 Glycosyl hydrolases family 2, TIM barrel domain TF3313_RS13710 PF00703 Glycosyl hydrolases family 2 TF3313_RS13720 PF00795 Carbon-nitrogen hydrolase TF3313_RS13745 PF00343 Carbohydrate phosphorylase TF3313_RS13745 PF11897 Protein of unknown function (DUF3417) TF3313_RS13755 PF00106 short chain dehydrogenase TF3313_RS13775 PF03883 Peroxide stress protein YaaA TF3313_RS13790 PF00271 Helicase conserved C-terminal domain TF3313_RS13790 PF04851 Type III restriction enzyme, res subunit TF3313_RS13795 PF07715 TonB-dependent Receptor Plug Domain TF3313_RS13795 PF00593 TonB dependent receptor TF3313_RS13800 PF14322 Starch-binding associating with outer membrane TF3313_RS13800 PF07980 SusD family TF3313_RS13830 PF07715 TonB-dependent Receptor Plug Domain TF3313_RS13830 PF00593 TonB dependent receptor TF3313_RS13850 PF01636 Phosphotransferase enzyme family TF3313_RS13855 PF01197 Ribosomal protein L31 TF3313_RS13860 PF01116 Fructose-bisphosphate aldolase class-II TF3313_RS13865 PF18073 Rubredoxin metal binding domain TF3313_RS13890 PF12464 Maltose acetyltransferase TF3313_RS13890 PF14602 Hexapeptide repeat of succinyl-transferase TF3313_RS13890 PF00132 Bacterial transferase hexapeptide (six repeats) TF3313_RS13895 PF17785 PUA-like domain TF3313_RS13895 PF10672 S-adenosylmethionine-dependent methyltransferase TF3313_RS13910 PF00698 Acyl transferase domain TF3313_RS13915 PF02416 mttA/Hcf106 family TF3313_RS13920 PF00902 Sec-independent protein translocase protein (TatC) TF3313_RS13925 PF00912 Transglycosylase TF3313_RS13925 PF17092 Penicillin-binding protein OB-like domain TF3313_RS13925 PF00905 Penicillin binding protein transpeptidase domain TF3313_RS13930 PF00772 DnaB-like helicase N terminal domain TF3313_RS13930 PF03796 DnaB-like helicase C terminal domain TF3313_RS13940 PF00005 ABC transporter TF3313_RS13940 PF12848 ABC transporter TF3313_RS13945 PF02142 MGS-like domain TF3313_RS13945 PF01808 AICARFT/IMPCHase bienzyme TF3313_RS13965 PF03717 Penicillin-binding Protein dimerisation domain TF3313_RS13965 PF00905 Penicillin binding protein transpeptidase domain TF3313_RS13970 PF01098 Cell cycle protein TF3313_RS13975 PF14229 Domain of unknown function (DUF4332) TF3313_RS13975 PF00152 tRNA synthetases class II (D, K and N) TF3313_RS13975 PF01336 OB-fold nucleic acid binding domain TF3313_RS13980 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus TF3313_RS13980 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus TF3313_RS13985 PF00342 Phosphoglucose isomerase TF3313_RS13995 PF01250 Ribosomal protein S6 TF3313_RS14000 PF01084 Ribosomal protein S18 TF3313_RS14005 PF03948 Ribosomal protein L9, C-terminal domain TF3313_RS14005 PF01281 Ribosomal protein L9, N-terminal domain TF3313_RS14010 PF01520 N-acetylmuramoyl-L-alanine amidase TF3313_RS14010 PF11741 AMIN domain