BFO_RS00015	SM00382	ATPases associated with a variety of cellular activities
BFO_RS00015	SM00760	Bacterial dnaA protein helix-turn-helix domain
BFO_RS00035	SM00563	Phosphate acyltransferases
BFO_RS00045	SM00825	Beta-ketoacyl synthase
BFO_RS00080	SM00382	ATPases associated with a variety of cellular activities
BFO_RS00250	SM01260	BFO_RS00250
BFO_RS00415	SM00850	LytTr DNA-binding domain
BFO_RS00430	SM01260	BFO_RS00430
BFO_RS00440	SM00245	tail specific protease
BFO_RS00495	SM01260	BFO_RS00495
BFO_RS00520	SM00382	ATPases associated with a variety of cellular activities
BFO_RS00560	SM00363	S4 RNA-binding domain
BFO_RS00570	SM00342	helix_turn_helix, arabinose operon control protein
BFO_RS00585	SM00382	ATPases associated with a variety of cellular activities
BFO_RS00590	SM00382	ATPases associated with a variety of cellular activities
BFO_RS00650	SM00883	Chaperonin 10 Kd subunit
BFO_RS00685	SM00448	cheY-homologous receiver domain
BFO_RS00685	SM00850	LytTr DNA-binding domain
BFO_RS00720	SM00382	ATPases associated with a variety of cellular activities
BFO_RS00745	SM00316	Ribosomal protein S1-like RNA-binding domain
BFO_RS00750	SM00382	ATPases associated with a variety of cellular activities
BFO_RS00750	SM00448	cheY-homologous receiver domain
BFO_RS00755	SM00387	Histidine kinase-like ATPases
BFO_RS00810	SM00530	Helix-turn-helix XRE-family like proteins 
BFO_RS00830	SM01323	BFO_RS00830
BFO_RS00840	SM00870	BFO_RS00840
BFO_RS00860	SM00965	Secretin and TonB N terminus short domain
BFO_RS00965	SM00292	breast cancer carboxy-terminal domain
BFO_RS00965	SM00532	Ligase N family
BFO_RS00975	SM01130	BFO_RS00975
BFO_RS00980	SM01007	Class II Aldolase and Adducin N-terminal domain
BFO_RS01010	SM00946	Prolyl-tRNA synthetase, C-terminal
BFO_RS01020	SM00245	tail specific protease
BFO_RS01035	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
BFO_RS01085	SM00271	DnaJ molecular chaperone homology domain
BFO_RS01095	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BFO_RS01100	SM00463	Small MutS-related domain
BFO_RS01100	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
BFO_RS01100	SM00534	ATPase domain of DNA mismatch repair MUTS family
BFO_RS01105	SM01126	BFO_RS01105
BFO_RS01155	SM00487	DEAD-like helicases superfamily
BFO_RS01155	SM00490	helicase superfamily c-terminal domain
BFO_RS01155	SM00982	BFO_RS01155
BFO_RS01155	SM01058	CarD-like/TRCF domain
BFO_RS01165	SM00893	Electron transfer flavoprotein domain
BFO_RS01175	SM00893	Electron transfer flavoprotein domain
BFO_RS01195	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
BFO_RS01225	SM00421	helix_turn_helix, Lux Regulon
BFO_RS01225	SM00448	cheY-homologous receiver domain
BFO_RS01355	SM00028	Tetratricopeptide repeats
BFO_RS01355	SM00421	helix_turn_helix, Lux Regulon
BFO_RS01370	SM01038	Beta galactosidase small chain
BFO_RS01385	SM00849	Metallo-beta-lactamase superfamily
BFO_RS01600	SM01126	BFO_RS01600
BFO_RS01650	SM01126	BFO_RS01650
BFO_RS01705	SM00382	ATPases associated with a variety of cellular activities
BFO_RS01735	SM01321	BFO_RS01735
BFO_RS01790	SM00864	Tubulin/FtsZ family, GTPase domain
BFO_RS01790	SM00865	Tubulin/FtsZ family, C-terminal domain
BFO_RS01795	SM00842	Cell division protein FtsA
BFO_RS01835	SM00740	BFO_RS01835
BFO_RS01850	SM00563	Phosphate acyltransferases
BFO_RS01865	SM00861	Transketolase, pyrimidine binding domain
BFO_RS01945	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BFO_RS01990	SM01350	BFO_RS01990
BFO_RS02030	SM01038	Beta galactosidase small chain
BFO_RS02035	SM00729	Elongator protein 3, MiaB family, Radical SAM
BFO_RS02040	SM00758	BFO_RS02040
BFO_RS02090	SM00382	ATPases associated with a variety of cellular activities
BFO_RS02095	SM00642	Alpha-amylase domain
BFO_RS02110	SM01359	BFO_RS02110
BFO_RS02110	SM01360	BFO_RS02110
BFO_RS02195	SM00710	Parallel beta-helix repeats
BFO_RS02305	SM00861	Transketolase, pyrimidine binding domain
BFO_RS02350	SM00530	Helix-turn-helix XRE-family like proteins 
BFO_RS02360	SM00530	Helix-turn-helix XRE-family like proteins 
BFO_RS02385	SM00487	DEAD-like helicases superfamily
BFO_RS02385	SM00490	helicase superfamily c-terminal domain
BFO_RS02395	SM00710	Parallel beta-helix repeats
BFO_RS02405	SM00984	UDP binding domain
BFO_RS02505	SM00421	helix_turn_helix, Lux Regulon
BFO_RS02505	SM00448	cheY-homologous receiver domain
BFO_RS02520	SM00465	GIY-YIG type nucleases (URI domain)
BFO_RS02635	SM00937	BFO_RS02635
BFO_RS02650	SM00530	Helix-turn-helix XRE-family like proteins 
BFO_RS02680	SM00028	Tetratricopeptide repeats
BFO_RS02700	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BFO_RS02700	SM00245	tail specific protease
BFO_RS02715	SM00072	Guanylate kinase homologues.
BFO_RS02850	SM00729	Elongator protein 3, MiaB family, Radical SAM
BFO_RS02945	SM00382	ATPases associated with a variety of cellular activities
BFO_RS02950	SM00245	tail specific protease
BFO_RS02975	SM00849	Metallo-beta-lactamase superfamily
BFO_RS03000	SM01149	BFO_RS03000
BFO_RS03065	SM00530	Helix-turn-helix XRE-family like proteins 
BFO_RS03100	SM00530	Helix-turn-helix XRE-family like proteins 
BFO_RS03110	SM01217	BFO_RS03110
BFO_RS03130	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
BFO_RS03130	SM00534	ATPase domain of DNA mismatch repair MUTS family
BFO_RS03140	SM00316	Ribosomal protein S1-like RNA-binding domain
BFO_RS03140	SM00955	BFO_RS03140
BFO_RS03175	SM00382	ATPases associated with a variety of cellular activities
BFO_RS03195	SM00567	E-Z type HEAT repeats
BFO_RS03205	SM00965	Secretin and TonB N terminus short domain
BFO_RS03225	SM00710	Parallel beta-helix repeats
BFO_RS03290	SM00421	helix_turn_helix, Lux Regulon
BFO_RS03300	SM00434	DNA Topoisomerase IV
BFO_RS03310	SM00245	tail specific protease
BFO_RS03320	SM00470	ParB-like nuclease domain
BFO_RS03330	SM00257	Lysin motif
BFO_RS03335	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BFO_RS03335	SM00954	Region found in RelA / SpoT proteins
BFO_RS03345	SM00422	helix_turn_helix, mercury resistance
BFO_RS03355	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
BFO_RS03415	SM01221	BFO_RS03415
BFO_RS03415	SM01222	BFO_RS03415
BFO_RS03455	SM00316	Ribosomal protein S1-like RNA-binding domain
BFO_RS03465	SM00014	Acid phosphatase homologues
BFO_RS03485	SM00382	ATPases associated with a variety of cellular activities
BFO_RS03505	SM00421	helix_turn_helix, Lux Regulon
BFO_RS03510	SM00028	Tetratricopeptide repeats
BFO_RS03540	SM00278	Helix-hairpin-helix DNA-binding motif class 1
BFO_RS03580	SM00382	ATPases associated with a variety of cellular activities
BFO_RS03605	SM00382	ATPases associated with a variety of cellular activities
BFO_RS03615	SM00642	Alpha-amylase domain
BFO_RS03625	SM00917	LeuA allosteric (dimerisation) domain
BFO_RS03645	SM00917	LeuA allosteric (dimerisation) domain
BFO_RS03650	SM01329	BFO_RS03650
BFO_RS03705	SM01018	B12 binding domain
BFO_RS03720	SM00852	Probable molybdopterin binding domain
BFO_RS03740	SM00903	Flavin reductase like domain
BFO_RS03790	SM00382	ATPases associated with a variety of cellular activities
BFO_RS03925	SM00387	Histidine kinase-like ATPases
BFO_RS03930	SM00448	cheY-homologous receiver domain
BFO_RS03930	SM00862	Transcriptional regulatory protein, C terminal
BFO_RS03950	SM00855	Phosphoglycerate mutase family
BFO_RS04030	SM00448	cheY-homologous receiver domain
BFO_RS04050	SM00487	DEAD-like helicases superfamily
BFO_RS04050	SM00490	helicase superfamily c-terminal domain
BFO_RS04210	SM00344	helix_turn_helix ASNC type
BFO_RS04255	SM00965	Secretin and TonB N terminus short domain
BFO_RS04275	SM00642	Alpha-amylase domain
BFO_RS04295	SM00965	Secretin and TonB N terminus short domain
BFO_RS04320	SM00881	CoA binding domain
BFO_RS04375	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
BFO_RS04375	SM00474	3'-5' exonuclease
BFO_RS04375	SM00475	5'-3' exonuclease
BFO_RS04375	SM00482	DNA polymerase A domain
BFO_RS04410	SM00981	BFO_RS04410
BFO_RS04430	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
BFO_RS04545	SM00316	Ribosomal protein S1-like RNA-binding domain
BFO_RS04545	SM00322	K homology RNA-binding domain
BFO_RS04595	SM00984	UDP binding domain
BFO_RS04660	SM00858	BFO_RS04660
BFO_RS04685	SM00822	BFO_RS04685
BFO_RS04725	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BFO_RS04725	SM00245	tail specific protease
BFO_RS04735	SM00387	Histidine kinase-like ATPases
BFO_RS04735	SM00433	TopoisomeraseII
BFO_RS04755	SM00460	Transglutaminase/protease-like homologues
BFO_RS04780	SM00825	Beta-ketoacyl synthase
BFO_RS04785	SM00358	Double-stranded RNA binding motif
BFO_RS04785	SM00535	Ribonuclease III family
BFO_RS04810	SM01228	BFO_RS04810
BFO_RS04815	SM00465	GIY-YIG type nucleases (URI domain)
BFO_RS04870	SM01001	AIR carboxylase
BFO_RS04910	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
BFO_RS04920	SM00028	Tetratricopeptide repeats
BFO_RS04920	SM00671	Sel1-like repeats.
BFO_RS04930	SM00028	Tetratricopeptide repeats
BFO_RS04935	SM00996	S-adenosyl-L-homocysteine hydrolase
BFO_RS04935	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
BFO_RS04940	SM00825	Beta-ketoacyl synthase
BFO_RS04970	SM00859	Semialdehyde dehydrogenase, NAD binding domain
BFO_RS04985	SM01126	BFO_RS04985
BFO_RS05010	SM00450	Rhodanese Homology Domain
BFO_RS05025	SM01133	BFO_RS05025
BFO_RS05135	SM00812	Alpha-L-fucosidase
BFO_RS05145	SM01209	BFO_RS05145
BFO_RS05145	SM01210	BFO_RS05145
BFO_RS05180	SM00560	LamG-like jellyroll fold domain
BFO_RS05295	SM00448	cheY-homologous receiver domain
BFO_RS05295	SM00862	Transcriptional regulatory protein, C terminal
BFO_RS05340	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
BFO_RS05340	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
BFO_RS05340	SM00493	BFO_RS05340
BFO_RS05350	SM00487	DEAD-like helicases superfamily
BFO_RS05350	SM00490	helicase superfamily c-terminal domain
BFO_RS05370	SM00838	Elongation factor G C-terminus
BFO_RS05370	SM00889	Elongation factor G, domain IV
BFO_RS05375	SM00387	Histidine kinase-like ATPases
BFO_RS05375	SM00388	His Kinase A (phosphoacceptor) domain
BFO_RS05375	SM00448	cheY-homologous receiver domain
BFO_RS05380	SM00382	ATPases associated with a variety of cellular activities
BFO_RS05380	SM00448	cheY-homologous receiver domain
BFO_RS05575	SM00382	ATPases associated with a variety of cellular activities
BFO_RS05625	SM01126	BFO_RS05625
BFO_RS05630	SM00028	Tetratricopeptide repeats
BFO_RS05640	SM00342	helix_turn_helix, arabinose operon control protein
BFO_RS05640	SM00387	Histidine kinase-like ATPases
BFO_RS05640	SM00388	His Kinase A (phosphoacceptor) domain
BFO_RS05640	SM00448	cheY-homologous receiver domain
BFO_RS05650	SM00840	BFO_RS05650
BFO_RS05655	SM00822	BFO_RS05655
BFO_RS05685	SM00825	Beta-ketoacyl synthase
BFO_RS05810	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BFO_RS05850	SM00014	Acid phosphatase homologues
BFO_RS05955	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
BFO_RS05960	SM00937	BFO_RS05960
BFO_RS05970	SM00047	Lysozyme subfamily 2
BFO_RS05975	SM00047	Lysozyme subfamily 2
BFO_RS06040	SM00650	Ribosomal RNA adenine dimethylases
BFO_RS06050	SM00382	ATPases associated with a variety of cellular activities
BFO_RS06075	SM00965	Secretin and TonB N terminus short domain
BFO_RS06105	SM00633	Glycosyl hydrolase family 10
BFO_RS06165	SM00645	Papain family cysteine protease
BFO_RS06195	SM00382	ATPases associated with a variety of cellular activities
BFO_RS06220	SM00841	Elongation factor P, C-terminal
BFO_RS06220	SM01185	BFO_RS06220
BFO_RS06230	SM01118	BFO_RS06230
BFO_RS06240	SM00883	Chaperonin 10 Kd subunit
BFO_RS06290	SM00935	Outer membrane protein (OmpH-like)
BFO_RS06295	SM00935	Outer membrane protein (OmpH-like)
BFO_RS06315	SM00382	ATPases associated with a variety of cellular activities
BFO_RS06340	SM00965	Secretin and TonB N terminus short domain
BFO_RS06390	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BFO_RS06395	SM00954	Region found in RelA / SpoT proteins
BFO_RS06405	SM01126	BFO_RS06405
BFO_RS06485	SM00893	Electron transfer flavoprotein domain
BFO_RS06490	SM00893	Electron transfer flavoprotein domain
BFO_RS06500	SM00382	ATPases associated with a variety of cellular activities
BFO_RS06505	SM00853	MutL C terminal dimerisation domain
BFO_RS06505	SM01340	BFO_RS06505
BFO_RS06535	SM00341	Helicase and RNase D C-terminal
BFO_RS06535	SM00487	DEAD-like helicases superfamily
BFO_RS06535	SM00490	helicase superfamily c-terminal domain
BFO_RS06535	SM00956	BFO_RS06535
BFO_RS06540	SM00382	ATPases associated with a variety of cellular activities
BFO_RS06540	SM00994	ClpX C4-type zinc finger
BFO_RS06540	SM01086	C-terminal, D2-small domain, of ClpB protein
BFO_RS06555	SM00360	RNA recognition motif
BFO_RS06585	SM00487	DEAD-like helicases superfamily
BFO_RS06585	SM00490	helicase superfamily c-terminal domain
BFO_RS06600	SM00028	Tetratricopeptide repeats
BFO_RS06660	SM00788	Adenylosuccinate synthetase
BFO_RS06705	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
BFO_RS06705	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
BFO_RS06705	SM00493	BFO_RS06705
BFO_RS06735	SM00838	Elongation factor G C-terminus
BFO_RS06735	SM00889	Elongation factor G, domain IV
BFO_RS06740	SM01403	BFO_RS06740
BFO_RS06760	SM01382	BFO_RS06760
BFO_RS06760	SM01383	BFO_RS06760
BFO_RS06775	SM00322	K homology RNA-binding domain
BFO_RS06795	SM01374	BFO_RS06795
BFO_RS06800	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
BFO_RS06850	SM00316	Ribosomal protein S1-like RNA-binding domain
BFO_RS06865	SM00363	S4 RNA-binding domain
BFO_RS06865	SM01390	BFO_RS06865
BFO_RS06870	SM00662	RNA polymerases D
BFO_RS06880	SM00382	ATPases associated with a variety of cellular activities
BFO_RS06895	SM00729	Elongator protein 3, MiaB family, Radical SAM
BFO_RS06900	SM00838	Elongation factor G C-terminus
BFO_RS06900	SM00889	Elongation factor G, domain IV
BFO_RS06915	SM00710	Parallel beta-helix repeats
BFO_RS06950	SM00642	Alpha-amylase domain
BFO_RS06955	SM01400	BFO_RS06955
BFO_RS07065	SM01252	BFO_RS07065
BFO_RS07085	SM00382	ATPases associated with a variety of cellular activities
BFO_RS07095	SM00382	ATPases associated with a variety of cellular activities
BFO_RS07115	SM00904	Riboflavin kinase
BFO_RS07170	SM00836	DALR anticodon binding domain
BFO_RS07170	SM01016	Arginyl tRNA synthetase N terminal dom
BFO_RS07175	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
BFO_RS07175	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
BFO_RS07175	SM00493	BFO_RS07175
BFO_RS07225	SM00729	Elongator protein 3, MiaB family, Radical SAM
BFO_RS07235	SM00729	Elongator protein 3, MiaB family, Radical SAM
BFO_RS07305	SM00382	ATPases associated with a variety of cellular activities
BFO_RS07330	SM00830	Chorismate mutase type II
BFO_RS07390	SM00387	Histidine kinase-like ATPases
BFO_RS07390	SM00433	TopoisomeraseII
BFO_RS07395	SM00382	ATPases associated with a variety of cellular activities
BFO_RS07520	SM00481	DNA polymerase alpha chain like domain
BFO_RS07535	SM00851	MGS-like domain
BFO_RS07540	SM00028	Tetratricopeptide repeats
BFO_RS07560	SM00487	DEAD-like helicases superfamily
BFO_RS07560	SM00490	helicase superfamily c-terminal domain
BFO_RS07585	SM00382	ATPases associated with a variety of cellular activities
BFO_RS07585	SM01086	C-terminal, D2-small domain, of ClpB protein
BFO_RS07590	SM01091	Transporter associated domain
BFO_RS07605	SM00478	endonuclease III
BFO_RS07645	SM00347	helix_turn_helix multiple antibiotic resistance protein
BFO_RS07655	SM00450	Rhodanese Homology Domain
BFO_RS07760	SM00316	Ribosomal protein S1-like RNA-binding domain
BFO_RS07780	SM01387	BFO_RS07780
BFO_RS07790	SM00419	helix_turn_helix, cAMP Regulatory protein
BFO_RS07820	SM00965	Secretin and TonB N terminus short domain
BFO_RS07880	SM00849	Metallo-beta-lactamase superfamily
BFO_RS07900	SM00859	Semialdehyde dehydrogenase, NAD binding domain
BFO_RS07920	SM00028	Tetratricopeptide repeats
BFO_RS07940	SM00729	Elongator protein 3, MiaB family, Radical SAM
BFO_RS07955	SM00382	ATPases associated with a variety of cellular activities
BFO_RS07980	SM00155	Phospholipase D. Active site motifs.
BFO_RS08055	SM00382	ATPases associated with a variety of cellular activities
BFO_RS08170	SM00873	B3/4 domain
BFO_RS08170	SM00874	tRNA synthetase B5 domain
BFO_RS08170	SM00896	Ferredoxin-fold anticodon binding domain
BFO_RS08270	SM00278	Helix-hairpin-helix DNA-binding motif class 1
BFO_RS08295	SM00342	helix_turn_helix, arabinose operon control protein
BFO_RS08355	SM00635	Bacterial Ig-like domain 2
BFO_RS08360	SM00028	Tetratricopeptide repeats
BFO_RS08360	SM00342	helix_turn_helix, arabinose operon control protein
BFO_RS08360	SM00387	Histidine kinase-like ATPases
BFO_RS08360	SM00388	His Kinase A (phosphoacceptor) domain
BFO_RS08360	SM00448	cheY-homologous receiver domain
BFO_RS08365	SM00758	BFO_RS08365
BFO_RS08405	SM00854	Bacterial capsule synthesis protein PGA_cap
BFO_RS08455	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
BFO_RS08460	SM00649	Ribosomal protein L11/L12
BFO_RS08485	SM00663	RNA polymerase I subunit A N-terminus
BFO_RS08510	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
BFO_RS08540	SM00487	DEAD-like helicases superfamily
BFO_RS08620	SM00518	AP endonuclease family 2
BFO_RS08645	SM00642	Alpha-amylase domain
BFO_RS08730	SM00341	Helicase and RNase D C-terminal
BFO_RS08740	SM01211	BFO_RS08740
BFO_RS08745	SM00387	Histidine kinase-like ATPases
BFO_RS08745	SM00388	His Kinase A (phosphoacceptor) domain
BFO_RS08750	SM00448	cheY-homologous receiver domain
BFO_RS08750	SM00862	Transcriptional regulatory protein, C terminal
BFO_RS08790	SM00822	BFO_RS08790
BFO_RS08880	SM00316	Ribosomal protein S1-like RNA-binding domain
BFO_RS08880	SM00732	Likely ribonuclease with RNase H fold.
BFO_RS08910	SM00382	ATPases associated with a variety of cellular activities
BFO_RS08915	SM01240	BFO_RS08915
BFO_RS08920	SM00899	BFO_RS08920
BFO_RS08940	SM00448	cheY-homologous receiver domain
BFO_RS08940	SM00850	LytTr DNA-binding domain
BFO_RS08945	SM01126	BFO_RS08945
BFO_RS09030	SM01192	BFO_RS09030
BFO_RS09030	SM01193	BFO_RS09030
BFO_RS09165	SM00382	ATPases associated with a variety of cellular activities
BFO_RS09210	SM00851	MGS-like domain
BFO_RS09210	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
BFO_RS09255	SM00322	K homology RNA-binding domain
BFO_RS09255	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BFO_RS09265	SM00382	ATPases associated with a variety of cellular activities
BFO_RS09285	SM00493	BFO_RS09285
BFO_RS09315	SM00986	Uracil DNA glycosylase superfamily
BFO_RS09315	SM00987	UreE urease accessory protein, C-terminal domain 
BFO_RS09350	SM00900	BFO_RS09350
BFO_RS09480	SM00822	BFO_RS09480
BFO_RS09520	SM01217	BFO_RS09520
BFO_RS09535	SM00382	ATPases associated with a variety of cellular activities
BFO_RS09535	SM01086	C-terminal, D2-small domain, of ClpB protein
BFO_RS09580	SM01130	BFO_RS09580
BFO_RS09670	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BFO_RS09740	SM00421	helix_turn_helix, Lux Regulon
BFO_RS09765	SM00530	Helix-turn-helix XRE-family like proteins 
BFO_RS09810	SM00382	ATPases associated with a variety of cellular activities
BFO_RS09815	SM00382	ATPases associated with a variety of cellular activities
BFO_RS09975	SM01290	BFO_RS09975
BFO_RS10070	SM01230	BFO_RS10070
BFO_RS10135	SM00487	DEAD-like helicases superfamily
BFO_RS10245	SM00411	bacterial (prokaryotic) histone like domain
BFO_RS10250	SM00905	Dihydroneopterin aldolase
BFO_RS10260	SM01065	Starch binding domain
BFO_RS10285	SM00382	ATPases associated with a variety of cellular activities
BFO_RS10330	SM01126	BFO_RS10330
BFO_RS10355	SM00670	Large family of predicted nucleotide-binding domains
BFO_RS10400	SM00480	DNA polymerase III beta subunit
BFO_RS10405	SM00479	BFO_RS10405
BFO_RS10425	SM00967	RNA 2'-O ribose methyltransferase substrate binding
BFO_RS10445	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
BFO_RS10465	SM00935	Outer membrane protein (OmpH-like)
BFO_RS10480	SM00100	Cyclic nucleotide-monophosphate binding domain
BFO_RS10480	SM00419	helix_turn_helix, cAMP Regulatory protein
BFO_RS10570	SM00382	ATPases associated with a variety of cellular activities
BFO_RS10605	SM00563	Phosphate acyltransferases
BFO_RS10740	SM01005	Alanine racemase, C-terminal domain
BFO_RS10750	SM00257	Lysin motif
BFO_RS10830	SM00460	Transglutaminase/protease-like homologues
BFO_RS10910	SM00257	Lysin motif
BFO_RS10950	SM00098	Alkaline phosphatase homologues
BFO_RS11075	SM00843	BFO_RS11075
BFO_RS11095	SM00977	TilS substrate C-terminal domain
BFO_RS11100	SM00357	Cold shock protein domain
BFO_RS11100	SM00382	ATPases associated with a variety of cellular activities
BFO_RS11100	SM00959	Rho termination factor, N-terminal domain
BFO_RS11115	SM00421	helix_turn_helix, Lux Regulon
BFO_RS11265	SM00812	Alpha-L-fucosidase
BFO_RS11310	SM00382	ATPases associated with a variety of cellular activities
BFO_RS11335	SM00534	ATPase domain of DNA mismatch repair MUTS family
BFO_RS11365	SM00900	BFO_RS11365
BFO_RS11495	SM00342	helix_turn_helix, arabinose operon control protein
BFO_RS11530	SM00965	Secretin and TonB N terminus short domain
BFO_RS11580	SM00965	Secretin and TonB N terminus short domain
BFO_RS11640	SM00729	Elongator protein 3, MiaB family, Radical SAM
BFO_RS11650	SM00487	DEAD-like helicases superfamily
BFO_RS11650	SM00490	helicase superfamily c-terminal domain
BFO_RS11655	SM00062	Bacterial periplasmic substrate-binding proteins
BFO_RS11700	SM00028	Tetratricopeptide repeats
BFO_RS11740	SM00342	helix_turn_helix, arabinose operon control protein
BFO_RS11740	SM00387	Histidine kinase-like ATPases
BFO_RS11740	SM00388	His Kinase A (phosphoacceptor) domain
BFO_RS11740	SM00448	cheY-homologous receiver domain
BFO_RS11775	SM00635	Bacterial Ig-like domain 2
BFO_RS11780	SM00060	Fibronectin type 3 domain
BFO_RS11780	SM00635	Bacterial Ig-like domain 2
BFO_RS11785	SM00635	Bacterial Ig-like domain 2
BFO_RS11800	SM00849	Metallo-beta-lactamase superfamily
BFO_RS11815	SM00434	DNA Topoisomerase IV
BFO_RS11820	SM00028	Tetratricopeptide repeats
BFO_RS11835	SM00014	Acid phosphatase homologues
BFO_RS11840	SM00028	Tetratricopeptide repeats
BFO_RS11850	SM00028	Tetratricopeptide repeats
BFO_RS11855	SM00327	von Willebrand factor (vWF) type A domain
BFO_RS11860	SM00327	von Willebrand factor (vWF) type A domain
BFO_RS11880	SM00411	bacterial (prokaryotic) histone like domain
BFO_RS11885	SM00411	bacterial (prokaryotic) histone like domain
BFO_RS11890	SM00729	Elongator protein 3, MiaB family, Radical SAM
BFO_RS11895	SM00382	ATPases associated with a variety of cellular activities
BFO_RS11895	SM00962	SRP54-type protein, GTPase domain
BFO_RS11895	SM00963	SRP54-type protein, helical bundle domain
BFO_RS11960	SM00316	Ribosomal protein S1-like RNA-binding domain
BFO_RS11965	SM00411	bacterial (prokaryotic) histone like domain
BFO_RS11970	SM00478	endonuclease III
BFO_RS11980	SM00116	Domain in cystathionine beta-synthase and other proteins.
BFO_RS11980	SM01091	Transporter associated domain
BFO_RS12020	SM00965	Secretin and TonB N terminus short domain
BFO_RS12040	SM00014	Acid phosphatase homologues
BFO_RS12045	SM00014	Acid phosphatase homologues
BFO_RS12140	SM00984	UDP binding domain
BFO_RS12185	SM01011	Aminopeptidase P, N-terminal domain
BFO_RS12245	SM00028	Tetratricopeptide repeats
BFO_RS12265	SM00062	Bacterial periplasmic substrate-binding proteins
BFO_RS12280	SM00850	LytTr DNA-binding domain
BFO_RS12285	SM00240	Forkhead associated domain
BFO_RS12305	SM00220	Serine/Threonine protein kinases, catalytic domain
BFO_RS12395	SM01126	BFO_RS12395
BFO_RS12400	SM00387	Histidine kinase-like ATPases
BFO_RS12425	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BFO_RS12425	SM00245	tail specific protease
BFO_RS12485	SM00382	ATPases associated with a variety of cellular activities
BFO_RS12490	SM00563	Phosphate acyltransferases
BFO_RS12535	SM00028	Tetratricopeptide repeats
BFO_RS12555	SM00957	SecA DEAD-like domain
BFO_RS12555	SM00958	SecA preprotein cross-linking domain
BFO_RS12560	SM00342	helix_turn_helix, arabinose operon control protein
BFO_RS12560	SM00387	Histidine kinase-like ATPases
BFO_RS12560	SM00388	His Kinase A (phosphoacceptor) domain
BFO_RS12560	SM00448	cheY-homologous receiver domain
BFO_RS12565	SM00028	Tetratricopeptide repeats
BFO_RS12575	SM00732	Likely ribonuclease with RNase H fold.
BFO_RS12590	SM00382	ATPases associated with a variety of cellular activities
BFO_RS12590	SM00962	SRP54-type protein, GTPase domain
BFO_RS12590	SM00963	SRP54-type protein, helical bundle domain
BFO_RS12640	SM00382	ATPases associated with a variety of cellular activities
BFO_RS12645	SM00400	zinc finger
BFO_RS12645	SM00493	BFO_RS12645
BFO_RS12710	SM00382	ATPases associated with a variety of cellular activities
BFO_RS12710	SM00464	Found in ATP-dependent protease La (LON)
BFO_RS12810	SM00382	ATPases associated with a variety of cellular activities
BFO_RS12855	SM00813	Alpha-L-arabinofuranosidase C-terminus
BFO_RS12860	SM00093	SERine  Proteinase INhibitors
BFO_RS12910	SM00890	Domain of unknown function
BFO_RS12930	SM00244	prohibitin homologues
BFO_RS13045	SM00487	DEAD-like helicases superfamily
BFO_RS13045	SM00490	helicase superfamily c-terminal domain
BFO_RS13195	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
BFO_RS13425	SM00342	helix_turn_helix, arabinose operon control protein
BFO_RS13495	SM00382	ATPases associated with a variety of cellular activities
BFO_RS13500	SM00530	Helix-turn-helix XRE-family like proteins 
BFO_RS13555	SM00740	BFO_RS13555
BFO_RS13560	SM00363	S4 RNA-binding domain
BFO_RS13575	SM00881	CoA binding domain
BFO_RS13600	SM00245	tail specific protease
BFO_RS13620	SM00563	Phosphate acyltransferases
BFO_RS13755	SM00382	ATPases associated with a variety of cellular activities
BFO_RS13790	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
BFO_RS13795	SM00474	3'-5' exonuclease
BFO_RS13805	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
BFO_RS13835	SM00382	ATPases associated with a variety of cellular activities
BFO_RS13840	SM00798	AICARFT/IMPCHase bienzyme
BFO_RS13840	SM00851	MGS-like domain
BFO_RS13905	SM00646	BFO_RS13905
BFO_RS14035	SM00387	Histidine kinase-like ATPases
BFO_RS14035	SM00388	His Kinase A (phosphoacceptor) domain
BFO_RS14210	SM00060	Fibronectin type 3 domain
BFO_RS14210	SM00635	Bacterial Ig-like domain 2
BFO_RS14315	SM00028	Tetratricopeptide repeats
BFO_RS14315	SM00387	Histidine kinase-like ATPases
BFO_RS14330	SM00635	Bacterial Ig-like domain 2
BFO_RS14335	SM00635	Bacterial Ig-like domain 2
BFO_RS14345	SM00635	Bacterial Ig-like domain 2
BFO_RS14420	SM00635	Bacterial Ig-like domain 2
BFO_RS14460	SM01324	BFO_RS14460
BFO_RS14465	SM00635	Bacterial Ig-like domain 2
BFO_RS14480	SM00635	Bacterial Ig-like domain 2
BFO_RS14570	SM00060	Fibronectin type 3 domain
BFO_RS14570	SM00635	Bacterial Ig-like domain 2
BFO_RS14575	SM00635	Bacterial Ig-like domain 2
