locus-tag	class	description
CA605_RS00005	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
CA605_RS00025	COG4608	Belongs to the ABC transporter superfamily
CA605_RS00030	COG0601	transmembrane transport
CA605_RS00035	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CA605_RS00040	COG0444	Belongs to the ABC transporter superfamily
CA605_RS00045	COG4166	transmembrane transport
CA605_RS00055	COG1074	ATP-dependent DNA helicase activity
CA605_RS00070	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
CA605_RS00070	COG0551	DNA topoisomerase type I activity
CA605_RS00075	COG0635	Involved in the biosynthesis of porphyrin-containing compound
CA605_RS00085	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
CA605_RS00090	COG2922	Belongs to the Smg family
CA605_RS00110	COG0018	arginyl-trna synthetase
CA605_RS00120	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
CA605_RS00150	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
CA605_RS00170	COG1160	GTP binding
CA605_RS00190	COG2431	L-lysine efflux transmembrane transporter activity
CA605_RS00205	COG4160	amino acid transport
CA605_RS00210	COG4598	ABC transporter
CA605_RS00215	COG0730	response to heat
CA605_RS00230	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
CA605_RS00240	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
CA605_RS00250	COG1994	Peptidase M50
CA605_RS00255	COG0859	PFAM glycosyl transferase family 9
CA605_RS00270	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
CA605_RS00280	COG2945	thiolester hydrolase activity
CA605_RS00285	COG1686	Belongs to the peptidase S11 family
CA605_RS00295	COG2921	Belongs to the UPF0250 family
CA605_RS00315	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
CA605_RS00320	COG1088	dTDP-glucose 4,6-dehydratase activity
CA605_RS00325	COG2814	Major facilitator Superfamily
CA605_RS00350	COG0513	Belongs to the DEAD box helicase family
CA605_RS00355	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
CA605_RS00360	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
CA605_RS00360	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
CA605_RS00375	COG2204	response regulator
CA605_RS00380	COG0569	domain protein
CA605_RS00390	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
CA605_RS00395	COG1040	competence protein
CA605_RS00400	COG2226	methyltransferase
CA605_RS00570	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
CA605_RS00575	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
CA605_RS00580	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
CA605_RS00590	COG0588	phosphoglycerate mutase activity
CA605_RS00595	COG4942	peptidase
CA605_RS00600	COG0793	Belongs to the peptidase S41A family
CA605_RS00605	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
CA605_RS00610	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
CA605_RS00625	COG0356	it plays a direct role in the translocation of protons across the membrane
CA605_RS00640	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
CA605_RS00645	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
CA605_RS00650	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
CA605_RS00655	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
CA605_RS00660	COG0355	proton-transporting ATP synthase activity, rotational mechanism
CA605_RS00680	COG1131	(ABC) transporter
CA605_RS00710	COG0523	cobalamin synthesis protein
CA605_RS00715	COG0735	belongs to the Fur family
CA605_RS00720	COG1121	(ABC) transporter
CA605_RS00725	COG1108	ABC-type Mn2 Zn2 transport systems permease components
CA605_RS00735	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
CA605_RS00745	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
CA605_RS00750	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
CA605_RS00760	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
CA605_RS00765	COG1077	Cell shape determining protein MreB Mrl
CA605_RS00780	COG0768	penicillin binding
CA605_RS00785	COG0772	Belongs to the SEDS family
CA605_RS00790	COG2177	Part of the ABC transporter FtsEX involved in
CA605_RS00795	COG2884	Cell division ATP-binding protein ftsE
CA605_RS00800	COG4597	amino acid ABC transporter
CA605_RS00805	COG0765	amino acid transport
CA605_RS00810	COG1126	abc transporter atp-binding protein
CA605_RS00825	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
CA605_RS00850	COG0237	dephospho-CoA kinase activity
CA605_RS00855	COG4582	Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity
CA605_RS00860	COG1045	serine acetyltransferase
CA605_RS00875	COG0142	geranyltranstransferase activity
CA605_RS00880	COG0129	dihydroxy-acid dehydratase activity
CA605_RS00885	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
CA605_RS00900	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
CA605_RS00905	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
CA605_RS00925	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
CA605_RS00930	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
CA605_RS00935	COG0179	Fumarylacetoacetate (FAA) hydrolase
CA605_RS00945	COG0826	peptidase U32
CA605_RS00960	COG1518	maintenance of DNA repeat elements
CA605_RS00995	COG0601	transmembrane transport
CA605_RS01000	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CA605_RS01010	COG4608	Belongs to the ABC transporter superfamily
CA605_RS01030	COG0261	This protein binds to 23S rRNA in the presence of protein L20
CA605_RS01040	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
CA605_RS01045	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
CA605_RS01050	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
CA605_RS01060	COG2823	Periplasmic or secreted lipoprotein
CA605_RS01065	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
CA605_RS01070	COG0792	nuclease activity
CA605_RS01085	COG1660	Displays ATPase and GTPase activities
CA605_RS01090	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
CA605_RS01100	COG1137	ATPase activity
CA605_RS01115	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
CA605_RS01125	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
CA605_RS01130	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
CA605_RS01140	COG0745	RESPONSE REGULATOR receiver
CA605_RS01145	COG2226	methyltransferase
CA605_RS01155	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
CA605_RS01160	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
CA605_RS01170	COG0351	phosphomethylpyrimidine kinase
CA605_RS01175	COG2326	polyphosphate kinase activity
CA605_RS01195	COG0720	synthase
CA605_RS01200	COG0602	queuosine metabolic process
CA605_RS01230	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
CA605_RS01235	COG2890	protein-(glutamine-N5) methyltransferase activity
CA605_RS01240	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
CA605_RS01255	COG0471	metal ion transport
CA605_RS01290	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
CA605_RS01290	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
CA605_RS01300	COG2830	Protein of unknown function (DUF452)
CA605_RS01305	COG0500	methyltransferase
CA605_RS01310	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
CA605_RS01315	COG0584	glycerophosphoryl diester phosphodiesterase
CA605_RS01320	COG1063	alcohol dehydrogenase
CA605_RS01335	COG2119	membrane
CA605_RS01345	COG2904	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
CA605_RS01345	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
CA605_RS01355	COG1629	transport
CA605_RS01355	COG4771	TonB-dependent receptor
CA605_RS01360	COG0037	tRNA processing
CA605_RS01370	COG0492	ferredoxin-NADP+ reductase activity
CA605_RS01375	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CA605_RS01385	COG4215	(ABC) transporter
CA605_RS01400	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
CA605_RS01405	COG0589	response to stress
CA605_RS01415	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
CA605_RS01460	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
CA605_RS01465	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
CA605_RS01470	COG1652	LysM domain
CA605_RS01475	COG0220	tRNA (guanine-N7-)-methyltransferase activity
CA605_RS01505	COG0717	Belongs to the dCTP deaminase family
CA605_RS01510	COG2081	HI0933 family
CA605_RS01520	COG0404	The glycine cleavage system catalyzes the degradation of glycine
CA605_RS01525	COG0509	glycine decarboxylation via glycine cleavage system
CA605_RS01530	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
CA605_RS01530	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
CA605_RS01535	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
CA605_RS01540	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
CA605_RS01545	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
CA605_RS01555	COG0277	FAD linked oxidase domain protein
CA605_RS01560	COG0457	Tetratricopeptide repeat
CA605_RS01565	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
CA605_RS01570	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
CA605_RS01580	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
CA605_RS01585	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
CA605_RS01605	COG0193	aminoacyl-tRNA hydrolase activity
CA605_RS01615	COG0012	GTP binding
CA605_RS01620	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
CA605_RS01625	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
CA605_RS01630	COG0742	ribosomal rna small subunit methyltransferase
CA605_RS01655	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
CA605_RS01660	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
CA605_RS01665	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
CA605_RS01670	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
CA605_RS01675	COG1546	Belongs to the CinA family
CA605_RS01680	COG0284	orotidine-5'-phosphate decarboxylase activity
CA605_RS01685	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
CA605_RS01695	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
CA605_RS01700	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CA605_RS01730	COG0823	Involved in the tonB-independent uptake of proteins
CA605_RS01745	COG0811	peptide transport
CA605_RS01750	COG0824	Thioesterase
CA605_RS01755	COG0442	prolyl-tRNA aminoacylation
CA605_RS01760	COG0494	nUDIX hydrolase
CA605_RS01790	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
CA605_RS01790	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
CA605_RS01790	COG0506	proline dehydrogenase activity
CA605_RS01795	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
CA605_RS01800	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
CA605_RS01840	COG0733	neurotransmitter:sodium symporter activity
CA605_RS01855	COG0438	transferase activity, transferring glycosyl groups
CA605_RS01890	COG0367	asparagine synthase
CA605_RS01905	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
CA605_RS01945	COG0418	dihydroorotase activity
CA605_RS01950	COG4122	O-methyltransferase activity
CA605_RS01960	COG0747	negative chemotaxis
CA605_RS01965	COG0747	negative chemotaxis
CA605_RS01970	COG0601	transmembrane transport
CA605_RS01975	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CA605_RS01980	COG0444	Belongs to the ABC transporter superfamily
CA605_RS01985	COG4608	Belongs to the ABC transporter superfamily
CA605_RS01990	COG3321	synthase
CA605_RS01990	COG1028	Short-chain dehydrogenase reductase Sdr
CA605_RS01990	COG0604	alcohol dehydrogenase
CA605_RS02000	COG0149	triose-phosphate isomerase activity
CA605_RS02005	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
CA605_RS02030	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CA605_RS02035	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CA605_RS02040	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CA605_RS02045	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CA605_RS02050	COG0649	NAD binding
CA605_RS02055	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
CA605_RS02065	COG1034	ATP synthesis coupled electron transport
CA605_RS02070	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
CA605_RS02075	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CA605_RS02085	COG0713	ATP synthesis coupled electron transport
CA605_RS02100	COG1007	ATP synthesis coupled electron transport
CA605_RS02110	COG0560	Phosphoserine phosphatase
CA605_RS02115	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
CA605_RS02120	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
CA605_RS02120	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
CA605_RS02125	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CA605_RS02130	COG0450	alkyl hydroperoxide reductase
CA605_RS02135	COG2205	protein histidine kinase activity
CA605_RS02145	COG1214	PFAM Peptidase M22, glycoprotease
CA605_RS02160	COG1196	nuclear chromosome segregation
CA605_RS02170	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
CA605_RS02175	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
CA605_RS02185	COG2917	probably involved in intracellular septation
CA605_RS02215	COG0410	ABC transporter
CA605_RS02220	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
CA605_RS02225	COG2878	Part of a membrane complex involved in electron transport
CA605_RS02230	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
CA605_RS02240	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
CA605_RS02245	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
CA605_RS02250	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
CA605_RS02255	COG1530	ribonuclease E activity
CA605_RS02260	COG0564	pseudouridine synthase activity
CA605_RS02275	COG0424	maF-like protein
CA605_RS02285	COG0333	Belongs to the bacterial ribosomal protein bL32 family
CA605_RS02290	COG0416	fatty acid biosynthetic process
CA605_RS02295	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
CA605_RS02300	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
CA605_RS02305	COG1028	Short-chain dehydrogenase reductase Sdr
CA605_RS02310	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CA605_RS02315	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
CA605_RS02325	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CA605_RS02335	COG0681	Belongs to the peptidase S26 family
CA605_RS02340	COG0571	ribonuclease III activity
CA605_RS02345	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
CA605_RS02350	COG1381	Involved in DNA repair and RecF pathway recombination
CA605_RS02355	COG0670	Belongs to the BI1 family
CA605_RS02365	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
CA605_RS02375	COG0583	DNA-binding transcription factor activity
CA605_RS02380	COG3226	Transcriptional regulator
CA605_RS02390	COG0791	NLP P60 protein
CA605_RS02410	COG0267	Belongs to the bacterial ribosomal protein bL33 family
CA605_RS02415	COG0227	Belongs to the bacterial ribosomal protein bL28 family
CA605_RS02430	COG0254	rRNA binding
CA605_RS02435	COG2003	Belongs to the UPF0758 family
CA605_RS02440	COG1047	Peptidyl-prolyl cis-trans
CA605_RS02445	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
CA605_RS02455	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
CA605_RS02460	COG0799	negative regulation of ribosome biogenesis
CA605_RS02465	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
CA605_RS02475	COG0217	transcriptional regulatory protein
CA605_RS02480	COG0433	COG0433 Predicted ATPase
CA605_RS02485	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
CA605_RS02490	COG0308	aminopeptidase N
CA605_RS02495	COG0312	modulator of DNA gyrase
CA605_RS02500	COG0482	sulfurtransferase activity
CA605_RS02510	COG3909	cytochrome
CA605_RS02530	COG0069	glutamate synthase activity
CA605_RS02540	COG4290	ribonuclease
CA605_RS02555	COG0488	(ABC) transporter
CA605_RS02560	COG2951	lytic endotransglycosylase activity
CA605_RS02565	COG0793	Belongs to the peptidase S41A family
CA605_RS02600	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
CA605_RS02605	COG0077	Prephenate dehydratase
CA605_RS02605	COG1605	Chorismate mutase
CA605_RS02610	COG0287	Prephenate dehydrogenase
CA605_RS02615	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
CA605_RS02625	COG0776	regulation of translation
CA605_RS02635	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
CA605_RS02640	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
CA605_RS02645	COG1555	photosystem II stabilization
CA605_RS02645	COG1596	polysaccharide export
CA605_RS02650	COG2608	mercury ion transmembrane transporter activity
CA605_RS02650	COG2217	Heavy metal translocating P-type atpase
CA605_RS02660	COG3278	Belongs to the heme-copper respiratory oxidase family
CA605_RS02690	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CA605_RS02700	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
CA605_RS02710	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
CA605_RS02725	COG1981	membrane
CA605_RS02740	COG0495	leucyl-tRNA aminoacylation
CA605_RS02745	COG2195	Cleaves the N-terminal amino acid of tripeptides
CA605_RS02750	COG2850	peptidyl-arginine hydroxylation
CA605_RS02755	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
CA605_RS02760	COG0668	transmembrane transport
CA605_RS02765	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
CA605_RS02770	COG0483	inositol monophosphate 1-phosphatase activity
CA605_RS02775	COG1968	undecaprenyl-diphosphatase activity
CA605_RS02795	COG0215	cysteine-tRNA ligase activity
CA605_RS02800	COG0825	malonyl-CoA metabolic process
CA605_RS02820	COG2358	TRAP transporter, solute receptor (TAXI family
CA605_RS02840	COG4178	(ABC) transporter
CA605_RS02860	COG1666	GTP binding
CA605_RS02865	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
CA605_RS02875	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CA605_RS02880	COG1049	propionate catabolic process, 2-methylcitrate cycle
CA605_RS02900	COG2173	Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
CA605_RS02905	COG0671	phosphoesterase, PA-phosphatase related
CA605_RS02925	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
CA605_RS02945	COG0543	2 iron, 2 sulfur cluster binding
CA605_RS02945	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
CA605_RS02955	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
CA605_RS02960	COG0425	Belongs to the sulfur carrier protein TusA family
CA605_RS02965	COG0228	four-way junction DNA binding
CA605_RS02970	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
CA605_RS02975	COG0336	Belongs to the RNA methyltransferase TrmD family
CA605_RS02980	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
CA605_RS02990	COG1104	cysteine desulfurase activity
CA605_RS02995	COG0822	iron-sulfur transferase activity
CA605_RS03000	COG0316	Belongs to the HesB IscA family
CA605_RS03005	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
CA605_RS03010	COG0443	Heat shock 70 kDa protein
CA605_RS03015	COG0633	Ferredoxin
CA605_RS03045	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
CA605_RS03055	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
CA605_RS03070	COG1136	(ABC) transporter
CA605_RS03080	COG0084	hydrolase, TatD family'
CA605_RS03090	COG0613	PHP domain protein
CA605_RS03100	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
CA605_RS03105	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
CA605_RS03110	COG0291	Belongs to the bacterial ribosomal protein bL35 family
CA605_RS03115	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
CA605_RS03120	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
CA605_RS03125	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CA605_RS03125	COG0072	phenylalanine-tRNA ligase activity
CA605_RS03130	COG0776	regulation of translation
CA605_RS03140	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
CA605_RS03145	COG1304	FMN binding
CA605_RS03150	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
CA605_RS03160	COG0210	DNA helicase
CA605_RS03165	COG1610	YqeY-like protein
CA605_RS03175	COG1686	Belongs to the peptidase S11 family
CA605_RS03180	COG0047	phosphoribosylformylglycinamidine synthase activity
CA605_RS03180	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
CA605_RS03195	COG0518	GMP synthase (glutamine-hydrolyzing) activity
CA605_RS03195	COG0519	Catalyzes the synthesis of GMP from XMP
CA605_RS03230	COG4145	pantothenate transmembrane transporter activity
CA605_RS03240	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
CA605_RS03245	COG4166	transmembrane transport
CA605_RS03295	COG1132	(ABC) transporter
CA605_RS03300	COG1132	(ABC) transporter
CA605_RS03305	COG0786	glutamate:sodium symporter activity
CA605_RS03310	COG0280	phosphate acetyltransferase
CA605_RS03310	COG0281	malic enzyme
CA605_RS03315	COG0567	Dehydrogenase, E1 component
CA605_RS03320	COG0508	dehydrogenase complex catalyzes the overall conversion of
CA605_RS03325	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CA605_RS03330	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
CA605_RS03350	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
CA605_RS03355	COG1758	RNA polymerase activity
CA605_RS03360	COG0194	GDP metabolic process
CA605_RS03365	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
CA605_RS03370	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
CA605_RS03395	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
CA605_RS03405	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
CA605_RS03410	COG3842	ATPase activity
CA605_RS03415	COG1176	ABC-type spermidine putrescine transport system, permease component I
CA605_RS03420	COG1177	transmembrane transport
CA605_RS03430	COG0704	Plays a role in the regulation of phosphate uptake
CA605_RS03435	COG2924	Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes
CA605_RS03440	COG1643	Atp-dependent helicase
CA605_RS03455	COG1132	(ABC) transporter
CA605_RS03460	COG1530	ribonuclease E activity
CA605_RS03465	COG0302	gtp cyclohydrolase
CA605_RS03525	COG2833	Protein of unknown function (DUF455)
CA605_RS03530	COG4178	(ABC) transporter
CA605_RS03545	COG0730	response to heat
CA605_RS03550	COG0557	exoribonuclease II activity
CA605_RS03555	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CA605_RS03560	COG0626	cystathionine gamma-synthase activity
CA605_RS03565	COG0776	regulation of translation
CA605_RS03575	COG1129	ABC transporter
CA605_RS03575	COG0842	Transport permease protein
CA605_RS03580	COG0842	Transport permease protein
CA605_RS03595	COG0137	argininosuccinate synthase activity
CA605_RS03600	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
CA605_RS03610	COG0268	Binds directly to 16S ribosomal RNA
CA605_RS03615	COG0728	peptidoglycan biosynthetic process
CA605_RS03620	COG0563	adenylate kinase activity
CA605_RS03625	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
CA605_RS03630	COG2835	tetraacyldisaccharide 4'-kinase activity
CA605_RS03640	COG1570	exodeoxyribonuclease VII activity
CA605_RS03645	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
CA605_RS03670	COG0411	ABC transporter
CA605_RS03680	COG1999	signal sequence binding
CA605_RS03685	COG0339	signal peptide processing
CA605_RS03690	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
CA605_RS03710	COG0508	dehydrogenase complex catalyzes the overall conversion of
CA605_RS03715	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CA605_RS03720	COG3038	cytochrome b561
CA605_RS03725	COG0285	dihydrofolate synthase activity
CA605_RS03735	COG1286	toxin biosynthetic process
CA605_RS03760	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
CA605_RS03765	COG0024	Methionine aminopeptidase
CA605_RS03770	COG0052	Belongs to the universal ribosomal protein uS2 family
CA605_RS03775	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
CA605_RS03780	COG0528	UMP kinase activity
CA605_RS03785	COG0233	cytoplasmic translational termination
CA605_RS03790	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
CA605_RS03795	COG0575	Belongs to the CDS family
CA605_RS03800	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
CA605_RS03805	COG0750	zinc metalloprotease
CA605_RS03820	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
CA605_RS03825	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
CA605_RS03830	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
CA605_RS03835	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
CA605_RS03840	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
CA605_RS03850	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CA605_RS03855	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
CA605_RS03875	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
CA605_RS03885	COG2914	Belongs to the UPF0125 (RnfH) family
CA605_RS03895	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
CA605_RS03900	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
CA605_RS03905	COG0470	DNA polymerase III
CA605_RS03910	COG0084	hydrolase, TatD family'
CA605_RS03920	COG1320	monovalent cation:proton antiporter activity
CA605_RS03925	COG2212	antiporter activity
CA605_RS03930	COG1863	multisubunit Na H antiporter MnhE subunit
CA605_RS03935	COG0651	ATP synthesis coupled electron transport
CA605_RS03940	COG1006	Multisubunit Na H antiporter MnhC subunit
CA605_RS03945	COG2111	Na H antiporter
CA605_RS03945	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
CA605_RS03970	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
CA605_RS03975	COG0778	Nitroreductase
CA605_RS04005	COG0697	spore germination
CA605_RS04015	COG3181	Tripartite tricarboxylate transporter family receptor
CA605_RS04025	COG0708	Exodeoxyribonuclease III
CA605_RS04035	COG1187	pseudouridine synthase activity
CA605_RS04045	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
CA605_RS04045	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
CA605_RS04050	COG0165	Argininosuccinate lyase
CA605_RS04055	COG0859	PFAM glycosyl transferase family 9
CA605_RS04060	COG2137	regulation of response to DNA damage stimulus
CA605_RS04065	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
CA605_RS04080	COG0556	nucleotide-excision repair
CA605_RS04090	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
CA605_RS04100	COG2358	TRAP transporter, solute receptor (TAXI family
CA605_RS04110	COG0628	permease
CA605_RS04135	COG2171	N-acyltransferase activity
CA605_RS04140	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
CA605_RS04145	COG2890	protein-(glutamine-N5) methyltransferase activity
CA605_RS04150	COG0488	(ABC) transporter
CA605_RS04160	COG4120	Belongs to the binding-protein-dependent transport system permease family
CA605_RS04170	COG0101	tRNA pseudouridine synthase activity
CA605_RS04175	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
CA605_RS04180	COG0473	3-isopropylmalate dehydrogenase activity
CA605_RS04200	COG1295	ribonuclease BN
CA605_RS04205	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
CA605_RS04210	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CA605_RS04215	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CA605_RS04220	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
CA605_RS04225	COG0038	chloride channel
CA605_RS04230	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
CA605_RS04245	COG2086	electron transfer activity
CA605_RS04255	COG0322	excinuclease ABC activity
CA605_RS04260	COG1472	Belongs to the glycosyl hydrolase 3 family
CA605_RS04265	COG0736	holo-[acyl-carrier-protein] synthase activity
CA605_RS04270	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
CA605_RS04275	COG1162	GTPase activity
CA605_RS04280	COG0335	large ribosomal subunit rRNA binding
CA605_RS04305	COG4964	Belongs to the GSP D family
CA605_RS04335	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
CA605_RS04360	COG0828	Belongs to the bacterial ribosomal protein bS21 family
CA605_RS04365	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
CA605_RS04370	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
CA605_RS04375	COG0330	HflC and HflK could
CA605_RS04380	COG0330	HflC and HflK could
CA605_RS04385	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
CA605_RS04390	COG1923	regulation of RNA biosynthetic process
CA605_RS04395	COG1160	GTP binding
CA605_RS04400	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
CA605_RS04405	COG2976	Protein conserved in bacteria
CA605_RS04410	COG0124	histidyl-tRNA synthetase
CA605_RS04425	COG0820	rRNA (adenine-C2-)-methyltransferase activity
CA605_RS04430	COG0105	UTP biosynthetic process
CA605_RS04435	COG0525	valine-tRNA ligase activity
CA605_RS04445	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
CA605_RS04465	COG0181	hydroxymethylbilane synthase activity
CA605_RS04470	COG0861	Integral membrane protein TerC family
CA605_RS04475	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
CA605_RS04480	COG0045	succinate-CoA ligase (ADP-forming) activity
CA605_RS04490	COG0405	Gamma-glutamyltransferase
CA605_RS04500	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
CA605_RS04510	COG4942	peptidase
CA605_RS04515	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
CA605_RS04525	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
CA605_RS04530	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
CA605_RS04535	COG2252	PERMEase
CA605_RS04545	COG0488	(ABC) transporter
CA605_RS04550	COG1619	proteins homologs of microcin C7 resistance protein MccF
CA605_RS04585	COG4206	TonB-dependent receptor
CA605_RS04585	COG1629	transport
CA605_RS04590	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
CA605_RS04615	COG0523	cobalamin synthesis protein
CA605_RS04640	COG1840	ABC-type Fe3 transport system, periplasmic component
CA605_RS04660	COG0372	Belongs to the citrate synthase family
CA605_RS04665	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
CA605_RS04670	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
CA605_RS04675	COG1053	succinate dehydrogenase
CA605_RS04690	COG0039	L-malate dehydrogenase activity
CA605_RS04725	COG3209	COG3209 Rhs family protein
CA605_RS04735	COG3209	COG3209 Rhs family protein
CA605_RS04745	COG3209	COG3209 Rhs family protein
CA605_RS04755	COG3209	COG3209 Rhs family protein
CA605_RS04765	COG3209	COG3209 Rhs family protein
CA605_RS04775	COG3209	COG3209 Rhs family protein
CA605_RS04825	COG0542	response to heat
CA605_RS04835	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
CA605_RS04840	COG0148	phosphopyruvate hydratase activity
CA605_RS04845	COG2877	3-deoxy-8-phosphooctulonate synthase activity
CA605_RS04850	COG0504	CTP synthase activity
CA605_RS04860	COG0583	DNA-binding transcription factor activity
CA605_RS04865	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CA605_RS04870	COG1757	Na H antiporter
CA605_RS04875	COG1012	belongs to the aldehyde dehydrogenase family
CA605_RS04880	COG2423	ornithine cyclodeaminase activity
CA605_RS04885	COG1301	dicarboxylic acid transport
CA605_RS04890	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
CA605_RS04895	COG5383	Protein conserved in bacteria
CA605_RS04925	COG2841	Protein conserved in bacteria
CA605_RS04935	COG4206	TonB-dependent receptor
CA605_RS04935	COG1629	transport
CA605_RS04945	COG0748	coenzyme F420 binding
CA605_RS04960	COG1217	gtp-binding protein TYPA
CA605_RS04965	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
CA605_RS04970	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
CA605_RS04975	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
CA605_RS04980	COG2251	uridine kinase activity
CA605_RS04980	COG0195	Participates in both transcription termination and antitermination
CA605_RS04985	COG0779	Required for maturation of 30S ribosomal subunits
CA605_RS04990	COG1187	pseudouridine synthase activity
CA605_RS04995	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
CA605_RS05015	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
CA605_RS05025	COG0210	DNA helicase
CA605_RS05030	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
CA605_RS05030	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
CA605_RS05035	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
CA605_RS05040	COG0196	riboflavin kinase activity
CA605_RS05045	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
CA605_RS05055	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
CA605_RS05065	COG0756	dUTP diphosphatase activity
CA605_RS05070	COG4771	TonB-dependent receptor
CA605_RS05070	COG1629	transport
CA605_RS05085	COG0542	response to heat
CA605_RS05090	COG1278	Cold shock
CA605_RS05100	COG0583	DNA-binding transcription factor activity
CA605_RS05105	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
CA605_RS05115	COG1840	ABC-type Fe3 transport system, periplasmic component
CA605_RS05120	COG1178	ABC-type Fe3 transport system permease component
CA605_RS05125	COG3842	ATPase activity
CA605_RS05140	COG0174	glutamine synthetase
CA605_RS05145	COG0635	Involved in the biosynthesis of porphyrin-containing compound
CA605_RS05150	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
CA605_RS05155	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
CA605_RS05160	COG1561	YicC-like family, N-terminal region
CA605_RS05165	COG0305	Participates in initiation and elongation during chromosome replication
CA605_RS05175	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
CA605_RS05185	COG0360	Binds together with S18 to 16S ribosomal RNA
CA605_RS05190	COG1469	GTP cyclohydrolase I activity
CA605_RS05195	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
CA605_RS05200	COG0142	geranyltranstransferase activity
CA605_RS05205	COG1722	exodeoxyribonuclease VII activity
CA605_RS05215	COG1228	amidohydrolase
CA605_RS05220	COG2986	histidine ammonia-lyase
CA605_RS05225	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
CA605_RS05230	COG2188	Transcriptional regulator
CA605_RS05245	COG0501	Belongs to the peptidase M48B family
CA605_RS05250	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CA605_RS05250	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CA605_RS05255	COG1611	Belongs to the LOG family
CA605_RS05260	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
CA605_RS05270	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
CA605_RS05275	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
CA605_RS05285	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
CA605_RS05290	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
CA605_RS05300	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
CA605_RS05310	COG0740	serine-type endopeptidase activity
CA605_RS05315	COG0544	peptidyl-prolyl cis-trans isomerase activity
CA605_RS05325	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
CA605_RS05330	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
CA605_RS05350	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
CA605_RS05360	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CA605_RS05365	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
CA605_RS05395	COG1136	(ABC) transporter
CA605_RS05395	COG0577	efflux transmembrane transporter activity
CA605_RS05405	COG1262	PFAM Formylglycine-generating sulfatase enzyme
CA605_RS05425	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
CA605_RS05435	COG1185	polyribonucleotide nucleotidyltransferase activity
CA605_RS05440	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
CA605_RS05450	COG1115	amino acid carrier protein
CA605_RS05455	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
CA605_RS05460	COG0440	acetolactate synthase activity
CA605_RS05465	COG0028	Belongs to the TPP enzyme family
CA605_RS05470	COG3022	response to hydroperoxide
CA605_RS05475	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
CA605_RS05480	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
CA605_RS05490	COG1674	ftsk spoiiie
CA605_RS05495	COG0492	ferredoxin-NADP+ reductase activity
CA605_RS05505	COG2707	UPF0756 membrane protein
CA605_RS05515	COG2855	membrane
CA605_RS05550	COG0443	Heat shock 70 kDa protein
CA605_RS05555	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
CA605_RS05565	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
CA605_RS05570	COG1420	regulation of RNA biosynthetic process
CA605_RS05580	COG0497	DNA recombination
CA605_RS05585	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
CA605_RS05590	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
CA605_RS05595	COG0735	belongs to the Fur family
CA605_RS05600	COG0812	UDP-N-acetylmuramate dehydrogenase activity
CA605_RS05610	COG1230	cation diffusion facilitator family transporter
CA605_RS05625	COG2837	iron assimilation
CA605_RS05635	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
CA605_RS05655	COG0248	Ppx GppA phosphatase
CA605_RS05665	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
CA605_RS05670	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
CA605_RS05675	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
CA605_RS05680	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
CA605_RS05685	COG1534	Rna-binding protein
CA605_RS05690	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
CA605_RS05695	COG2233	PERMEase
CA605_RS05705	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
CA605_RS05710	COG0505	Belongs to the CarA family
CA605_RS05715	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
CA605_RS05730	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
CA605_RS05740	COG1074	ATP-dependent DNA helicase activity
CA605_RS05760	COG3384	dioxygenase
CA605_RS05775	COG4974	Belongs to the 'phage' integrase family
CA605_RS05780	COG0802	atpase or kinase
CA605_RS05785	COG0860	N-Acetylmuramoyl-L-alanine amidase
CA605_RS05790	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
CA605_RS05795	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
CA605_RS05800	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
CA605_RS05805	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
CA605_RS05810	COG0617	tRNA 3'-terminal CCA addition
CA605_RS05815	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
CA605_RS05830	COG3258	Cytochrome c
CA605_RS05870	COG0167	dihydroorotate dehydrogenase activity
CA605_RS05880	COG0513	Belongs to the DEAD box helicase family
CA605_RS05900	COG0138	bifunctional purine biosynthesis protein purh
CA605_RS05905	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
CA605_RS05910	COG0632	four-way junction helicase activity
CA605_RS05940	COG2022	thiamine diphosphate biosynthetic process
CA605_RS05985	COG2239	Acts as a magnesium transporter
CA605_RS05990	COG0653	protein targeting
CA605_RS05995	COG0739	heme binding
CA605_RS06005	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
CA605_RS06010	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
CA605_RS06020	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
CA605_RS06025	COG1181	Belongs to the D-alanine--D-alanine ligase family
CA605_RS06030	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
CA605_RS06035	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
CA605_RS06040	COG0772	Belongs to the SEDS family
CA605_RS06045	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
CA605_RS06050	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
CA605_RS06055	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
CA605_RS06070	COG0275	rRNA processing
CA605_RS06075	COG2001	Belongs to the MraZ family
CA605_RS06085	COG0753	catalase activity
CA605_RS06090	COG0752	glycyl-tRNA synthetase alpha subunit
CA605_RS06095	COG0751	glycine-tRNA ligase activity
CA605_RS06100	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
CA605_RS06115	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
CA605_RS06120	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
CA605_RS06155	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
CA605_RS06160	COG0850	regulation of cytokinetic process
CA605_RS06165	COG2894	cell division
CA605_RS06170	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
CA605_RS06180	COG0488	(ABC) transporter
CA605_RS06190	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
CA605_RS06195	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
CA605_RS06200	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
CA605_RS06205	COG0259	pyridoxamine-phosphate oxidase activity
CA605_RS06210	COG1858	cytochrome C peroxidase
CA605_RS06215	COG0009	L-threonylcarbamoyladenylate synthase
CA605_RS06220	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
CA605_RS06225	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
CA605_RS06230	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
CA605_RS06240	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
CA605_RS06245	COG0126	phosphoglycerate kinase activity
CA605_RS06250	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
CA605_RS06255	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
CA605_RS06260	COG1385	rRNA (uridine-N3-)-methyltransferase activity
CA605_RS06275	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
CA605_RS06300	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
CA605_RS06305	COG0343	queuine tRNA-ribosyltransferase activity
CA605_RS06310	COG1862	Preprotein translocase
CA605_RS06315	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
CA605_RS06320	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
CA605_RS06325	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
CA605_RS06330	COG1702	phosphate starvation-inducible protein PhoH
CA605_RS06335	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
CA605_RS06340	COG4535	Mg2 and Co2 transporter CorC
CA605_RS06365	COG4172	Belongs to the ABC transporter superfamily
CA605_RS06370	COG0747	negative chemotaxis
CA605_RS06375	COG0601	transmembrane transport
CA605_RS06380	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CA605_RS06410	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CA605_RS06415	COG1388	LysM domain
CA605_RS06415	COG0741	lytic transglycosylase activity
CA605_RS06435	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CA605_RS06435	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CA605_RS06440	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
CA605_RS06445	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
CA605_RS06450	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
CA605_RS06455	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
CA605_RS06460	COG0316	Belongs to the HesB IscA family
CA605_RS06470	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
CA605_RS06475	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
CA605_RS06480	COG0312	modulator of DNA gyrase
CA605_RS06490	COG0400	carboxylic ester hydrolase activity
CA605_RS06495	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
CA605_RS06510	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CA605_RS06520	COG2264	protein methyltransferase activity
CA605_RS06530	COG0511	ligase activity, forming carbon-carbon bonds
CA605_RS06535	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
CA605_RS06540	COG4776	Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction
CA605_RS06565	COG0540	Belongs to the ATCase OTCase family
CA605_RS06570	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
CA605_RS06580	COG1773	rubredoxin
CA605_RS06585	COG0352	thiamine-phosphate diphosphorylase activity
CA605_RS06590	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
CA605_RS06595	COG0513	Belongs to the DEAD box helicase family
CA605_RS06605	COG0617	tRNA 3'-terminal CCA addition
CA605_RS06640	COG2879	small protein
CA605_RS06645	COG1966	Carbon starvation protein
CA605_RS06660	COG3180	Ammonia monooxygenase
CA605_RS06680	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
CA605_RS06685	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
CA605_RS06690	COG1560	Kdo2-lipid A biosynthetic process
CA605_RS06695	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
CA605_RS06700	COG0708	Exodeoxyribonuclease III
CA605_RS06710	COG2223	nitrite transmembrane transporter activity
CA605_RS06715	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
CA605_RS06720	COG3245	cytochrome
CA605_RS06760	COG4566	intracellular signal transduction
CA605_RS06775	COG3258	Cytochrome c
CA605_RS06780	COG1858	cytochrome C peroxidase
CA605_RS06835	COG2969	positive regulation of protein catabolic process
CA605_RS06840	COG0625	glutathione transferase activity
CA605_RS06845	COG2857	Cytochrome c1
CA605_RS06850	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
CA605_RS06855	COG0723	plastoquinol--plastocyanin reductase activity
CA605_RS06860	COG1970	mechanosensitive ion channel activity
CA605_RS06865	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
CA605_RS06870	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CA605_RS06875	COG0805	protein transport
CA605_RS06880	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
CA605_RS06885	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
CA605_RS06890	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
CA605_RS06895	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
CA605_RS06905	COG0842	Transport permease protein
CA605_RS06910	COG1131	(ABC) transporter
CA605_RS06920	COG2853	Lipoprotein
CA605_RS06925	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
CA605_RS06930	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
CA605_RS06935	COG1127	ABC transporter
CA605_RS06940	COG0758	DNA mediated transformation
CA605_RS06945	COG0242	peptide deformylase activity
CA605_RS06950	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
CA605_RS06955	COG1253	flavin adenine dinucleotide binding
CA605_RS06985	COG2814	Major facilitator Superfamily
CA605_RS07000	COG0232	Belongs to the dGTPase family. Type 2 subfamily
CA605_RS07010	COG0019	diaminopimelate decarboxylase activity
CA605_RS07020	COG1965	Belongs to the frataxin family
CA605_RS07025	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
CA605_RS07030	COG1333	cytochrome c biogenesis protein
CA605_RS07040	COG0218	Necessary for normal cell division and for the maintenance of normal septation
CA605_RS07055	COG4232	protein-disulfide reductase activity
CA605_RS07065	COG0786	glutamate:sodium symporter activity
CA605_RS07070	COG0010	Belongs to the arginase family
CA605_RS07085	COG0203	ribosomal protein L17
CA605_RS07090	COG0202	RNA polymerase activity
CA605_RS07095	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
CA605_RS07100	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
CA605_RS07105	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
CA605_RS07110	COG0257	Belongs to the bacterial ribosomal protein bL36 family
CA605_RS07120	COG0201	protein transport
CA605_RS07125	COG0200	Binds to the 23S rRNA
CA605_RS07130	COG1841	ribosomal large subunit assembly
CA605_RS07135	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
CA605_RS07140	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
CA605_RS07150	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
CA605_RS07155	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
CA605_RS07160	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
CA605_RS07165	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
CA605_RS07170	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
CA605_RS07175	COG2056	Na+-H+ antiporter family
CA605_RS07180	COG2056	Na+-H+ antiporter family
CA605_RS07185	COG2132	Multicopper oxidase
CA605_RS07190	COG1999	signal sequence binding
CA605_RS07200	COG2217	Heavy metal translocating P-type atpase
CA605_RS07220	COG0625	glutathione transferase activity
CA605_RS07225	COG1373	ATPase (AAA superfamily
CA605_RS07260	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
CA605_RS07265	COG0255	Belongs to the universal ribosomal protein uL29 family
CA605_RS07270	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
CA605_RS07275	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
CA605_RS07280	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
CA605_RS07285	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
CA605_RS07290	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
CA605_RS07295	COG0089	rRNA binding
CA605_RS07300	COG0088	Forms part of the polypeptide exit tunnel
CA605_RS07305	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
CA605_RS07310	COG1322	Protein conserved in bacteria
CA605_RS07325	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
CA605_RS07350	COG0051	transcription antitermination factor activity, RNA binding
CA605_RS07365	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
CA605_RS07370	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
CA605_RS07375	COG0049	tRNA binding
CA605_RS07380	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
CA605_RS07400	COG2301	Belongs to the HpcH HpaI aldolase family
CA605_RS07410	COG3777	bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding
CA605_RS07415	COG1960	acyl-CoA dehydrogenase activity
CA605_RS07440	COG3313	Fe-S protein
CA605_RS07445	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
CA605_RS07450	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
CA605_RS07455	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
CA605_RS07470	COG0010	Belongs to the arginase family
CA605_RS07475	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
CA605_RS07480	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
CA605_RS07485	COG0085	RNA polymerase activity
CA605_RS07490	COG0222	ribosome binding
CA605_RS07495	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
CA605_RS07500	COG0081	regulation of translation
CA605_RS07505	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
CA605_RS07525	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
CA605_RS07550	COG1475	DNA binding
CA605_RS07555	COG1192	Involved in chromosome partitioning
CA605_RS07560	COG0357	Ribosomal RNA small subunit methyltransferase G
CA605_RS07565	COG0445	tRNA wobble uridine modification
CA605_RS07570	COG0537	adenosine 5'-monophosphoramidase activity
CA605_RS07580	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
CA605_RS07585	COG0594	ribonuclease P activity
CA605_RS07590	COG0230	Belongs to the bacterial ribosomal protein bL34 family