locus-tag class description CA943_RS00005 PF00308 Bacterial dnaA protein CA943_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix CA943_RS00005 PF11638 DnaA N-terminal domain CA943_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain CA943_RS00010 PF02767 DNA polymerase III beta subunit, central domain CA943_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain CA943_RS00015 PF00986 DNA gyrase B subunit, carboxyl terminus CA943_RS00015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CA943_RS00015 PF01751 Toprim domain CA943_RS00015 PF18053 DNA gyrase B subunit insert domain CA943_RS00015 PF00204 DNA gyrase B CA943_RS00020 PF00849 RNA pseudouridylate synthase CA943_RS00020 PF01479 S4 domain CA943_RS00025 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CA943_RS00025 PF00005 ABC transporter CA943_RS00030 PF00528 Binding-protein-dependent transport system inner membrane component CA943_RS00035 PF12911 N-terminal TM domain of oligopeptide transport permease C CA943_RS00035 PF00528 Binding-protein-dependent transport system inner membrane component CA943_RS00040 PF00005 ABC transporter CA943_RS00040 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CA943_RS00045 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CA943_RS00055 PF00580 UvrD/REP helicase N-terminal domain CA943_RS00055 PF13361 UvrD-like helicase C-terminal domain CA943_RS00060 PF00970 Oxidoreductase FAD-binding domain CA943_RS00060 PF00175 Oxidoreductase NAD-binding domain CA943_RS00070 PF01131 DNA topoisomerase CA943_RS00070 PF01751 Toprim domain CA943_RS00075 PF04055 Radical SAM superfamily CA943_RS00075 PF06969 HemN C-terminal domain CA943_RS00085 PF00749 tRNA synthetases class I (E and Q), catalytic domain CA943_RS00090 PF04361 Protein of unknown function (DUF494) CA943_RS00100 PF01323 DSBA-like thioredoxin domain CA943_RS00100 PF00085 Thioredoxin CA943_RS00110 PF05746 DALR anticodon binding domain CA943_RS00110 PF03485 Arginyl tRNA synthetase N terminal domain CA943_RS00110 PF00750 tRNA synthetases class I (R) CA943_RS00120 PF08502 LeuA allosteric (dimerisation) domain CA943_RS00120 PF00682 HMGL-like CA943_RS00140 PF00210 Ferritin-like domain CA943_RS00150 PF03144 Elongation factor Tu domain 2 CA943_RS00150 PF16658 Class II release factor RF3, C-terminal domain CA943_RS00150 PF00009 Elongation factor Tu GTP binding domain CA943_RS00170 PF01926 50S ribosome-binding GTPase CA943_RS00170 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CA943_RS00190 PF03956 Lysine exporter LysO CA943_RS00195 PF00497 Bacterial extracellular solute-binding proteins, family 3 CA943_RS00200 PF00528 Binding-protein-dependent transport system inner membrane component CA943_RS00205 PF00528 Binding-protein-dependent transport system inner membrane component CA943_RS00210 PF00005 ABC transporter CA943_RS00215 PF01925 Sulfite exporter TauE/SafE CA943_RS00230 PF01040 UbiA prenyltransferase family CA943_RS00240 PF02938 GAD domain CA943_RS00240 PF01336 OB-fold nucleic acid binding domain CA943_RS00240 PF00152 tRNA synthetases class II (D, K and N) CA943_RS00250 PF02163 Peptidase family M50 CA943_RS00255 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CA943_RS00260 PF00534 Glycosyl transferases group 1 CA943_RS00260 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) CA943_RS00270 PF03309 Type III pantothenate kinase CA943_RS00280 PF02129 X-Pro dipeptidyl-peptidase (S15 family) CA943_RS00285 PF00768 D-alanyl-D-alanine carboxypeptidase CA943_RS00285 PF07943 Penicillin-binding protein 5, C-terminal domain CA943_RS00290 PF01063 Amino-transferase class IV CA943_RS00295 PF04359 Protein of unknown function (DUF493) CA943_RS00300 PF03099 Biotin/lipoate A/B protein ligase family CA943_RS00315 PF04055 Radical SAM superfamily CA943_RS00315 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family CA943_RS00320 PF16363 GDP-mannose 4,6 dehydratase CA943_RS00325 PF07690 Major Facilitator Superfamily CA943_RS00330 PF14602 Hexapeptide repeat of succinyl-transferase CA943_RS00330 PF00132 Bacterial transferase hexapeptide (six repeats) CA943_RS00330 PF12804 MobA-like NTP transferase domain CA943_RS00340 PF00140 Sigma-70 factor, region 1.2 CA943_RS00340 PF04545 Sigma-70, region 4 CA943_RS00340 PF04542 Sigma-70 region 2 CA943_RS00350 PF00271 Helicase conserved C-terminal domain CA943_RS00350 PF00270 DEAD/DEAH box helicase CA943_RS00350 PF03880 DbpA RNA binding domain CA943_RS00355 PF02911 Formyl transferase, C-terminal domain CA943_RS00355 PF00551 Formyl transferase CA943_RS00360 PF01189 16S rRNA methyltransferase RsmB/F CA943_RS00360 PF01029 NusB family CA943_RS00370 PF00672 HAMP domain CA943_RS00370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CA943_RS00375 PF00158 Sigma-54 interaction domain CA943_RS00375 PF00072 Response regulator receiver domain CA943_RS00375 PF02954 Bacterial regulatory protein, Fis family CA943_RS00380 PF02080 TrkA-C domain CA943_RS00380 PF02254 TrkA-N domain CA943_RS00385 PF02386 Cation transport protein CA943_RS00390 PF00588 SpoU rRNA Methylase family CA943_RS00395 PF00156 Phosphoribosyl transferase domain CA943_RS00400 PF08241 Methyltransferase domain CA943_RS00410 PF17871 AAA lid domain CA943_RS00410 PF00004 ATPase family associated with various cellular activities (AAA) CA943_RS00410 PF10431 C-terminal, D2-small domain, of ClpB protein CA943_RS00410 PF07724 AAA domain (Cdc48 subfamily) CA943_RS00430 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE CA943_RS00435 PF00691 OmpA family CA943_RS00435 PF13677 Membrane MotB of proton-channel complex MotA/MotB CA943_RS00440 PF06761 Intracellular multiplication and human macrophage-killing CA943_RS00440 PF14331 ImcF-related N-terminal domain CA943_RS00440 PF06744 Type VI secretion protein IcmF C-terminal CA943_RS00460 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 CA943_RS00465 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath CA943_RS00470 PF05638 Type VI secretion system effector, Hcp CA943_RS00475 PF07024 ImpE protein CA943_RS00480 PF04965 Gene 25-like lysozyme CA943_RS00485 PF05947 Type VI secretion system, TssF CA943_RS00495 PF00593 TonB dependent receptor CA943_RS00495 PF07715 TonB-dependent Receptor Plug Domain CA943_RS00505 PF06715 Gp5 C-terminal repeat (3 copies) CA943_RS00505 PF04717 Type VI secretion system, phage-baseplate injector CA943_RS00570 PF02556 Preprotein translocase subunit SecB CA943_RS00575 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CA943_RS00575 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CA943_RS00580 PF00462 Glutaredoxin CA943_RS00590 PF00300 Histidine phosphatase superfamily (branch 1) CA943_RS00595 PF01551 Peptidase family M23 CA943_RS00600 PF03572 Peptidase family S41 CA943_RS00600 PF13180 PDZ domain CA943_RS00605 PF00899 ThiF family CA943_RS00610 PF03480 Bacterial extracellular solute-binding protein, family 7 CA943_RS00625 PF00119 ATP synthase A chain CA943_RS00630 PF00137 ATP synthase subunit C CA943_RS00635 PF00430 ATP synthase B/B' CF(0) CA943_RS00640 PF00213 ATP synthase delta (OSCP) subunit CA943_RS00645 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CA943_RS00645 PF02874 ATP synthase alpha/beta family, beta-barrel domain CA943_RS00645 PF00306 ATP synthase alpha/beta chain, C terminal domain CA943_RS00650 PF00231 ATP synthase CA943_RS00655 PF02874 ATP synthase alpha/beta family, beta-barrel domain CA943_RS00655 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CA943_RS00660 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CA943_RS00680 PF00005 ABC transporter CA943_RS00695 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CA943_RS00700 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component CA943_RS00705 PF03480 Bacterial extracellular solute-binding protein, family 7 CA943_RS00710 PF07683 Cobalamin synthesis protein cobW C-terminal domain CA943_RS00710 PF02492 CobW/HypB/UreG, nucleotide-binding domain CA943_RS00715 PF01475 Ferric uptake regulator family CA943_RS00720 PF00005 ABC transporter CA943_RS00725 PF00950 ABC 3 transport family CA943_RS00735 PF00589 Phage integrase family CA943_RS00735 PF02899 Phage integrase, N-terminal SAM-like domain CA943_RS00745 PF01678 Diaminopimelate epimerase CA943_RS00750 PF02934 GatB/GatE catalytic domain CA943_RS00750 PF02637 GatB domain CA943_RS00755 PF01425 Amidase CA943_RS00760 PF02686 Glu-tRNAGln amidotransferase C subunit CA943_RS00780 PF00905 Penicillin binding protein transpeptidase domain CA943_RS00780 PF03717 Penicillin-binding Protein dimerisation domain CA943_RS00785 PF01098 Cell cycle protein CA943_RS00790 PF18075 FtsX extracellular domain CA943_RS00795 PF00005 ABC transporter CA943_RS00800 PF00528 Binding-protein-dependent transport system inner membrane component CA943_RS00805 PF00528 Binding-protein-dependent transport system inner membrane component CA943_RS00810 PF00005 ABC transporter CA943_RS00820 PF02569 Pantoate-beta-alanine ligase CA943_RS00825 PF02616 Segregation and condensation protein ScpA CA943_RS00835 PF00196 Bacterial regulatory proteins, luxR family CA943_RS00835 PF00072 Response regulator receiver domain CA943_RS00845 PF01121 Dephospho-CoA kinase CA943_RS00850 PF07072 Cell division protein CA943_RS00855 PF00132 Bacterial transferase hexapeptide (six repeats) CA943_RS00860 PF00293 NUDIX domain CA943_RS00870 PF00348 Polyprenyl synthetase CA943_RS00875 PF00920 Dehydratase family CA943_RS00880 PF01926 50S ribosome-binding GTPase CA943_RS00880 PF01018 GTP1/OBG CA943_RS00895 PF10431 C-terminal, D2-small domain, of ClpB protein CA943_RS00895 PF00004 ATPase family associated with various cellular activities (AAA) CA943_RS00895 PF07724 AAA domain (Cdc48 subfamily) CA943_RS00900 PF00227 Proteasome subunit CA943_RS00910 PF01258 Prokaryotic dksA/traR C4-type zinc finger CA943_RS00920 PF01208 Uroporphyrinogen decarboxylase (URO-D) CA943_RS00925 PF18074 Primosomal protein N C-terminal domain CA943_RS00925 PF00270 DEAD/DEAH box helicase CA943_RS00925 PF17764 3′ DNA-binding domain (3′BD) CA943_RS00925 PF00271 Helicase conserved C-terminal domain CA943_RS00925 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CA943_RS00930 PF01557 Fumarylacetoacetate (FAA) hydrolase family CA943_RS00940 PF16325 Peptidase family U32 C-terminal domain CA943_RS00940 PF01136 Peptidase family U32 CA943_RS00950 PF09827 CRISPR associated protein Cas2 CA943_RS00955 PF01867 CRISPR associated protein Cas1 CA943_RS00985 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CA943_RS00990 PF00528 Binding-protein-dependent transport system inner membrane component CA943_RS00995 PF00528 Binding-protein-dependent transport system inner membrane component CA943_RS00995 PF12911 N-terminal TM domain of oligopeptide transport permease C CA943_RS01000 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CA943_RS01000 PF00005 ABC transporter CA943_RS01005 PF00005 ABC transporter CA943_RS01005 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CA943_RS01020 PF01016 Ribosomal L27 protein CA943_RS01025 PF00829 Ribosomal prokaryotic L21 protein CA943_RS01035 PF00834 Ribulose-phosphate 3 epimerase family CA943_RS01040 PF06725 3D domain CA943_RS01040 PF03562 MltA specific insert domain CA943_RS01045 PF10411 Disulfide bond isomerase protein N-terminus CA943_RS01045 PF13098 Thioredoxin-like domain CA943_RS01055 PF04972 BON domain CA943_RS01060 PF13580 SIS domain CA943_RS01065 PF02021 Uncharacterised protein family UPF0102 CA943_RS01070 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CA943_RS01075 PF03330 Lytic transglycolase CA943_RS01075 PF05036 Sporulation related domain CA943_RS01080 PF03668 P-loop ATPase protein family CA943_RS01085 PF02603 HPr Serine kinase N terminus CA943_RS01085 PF07475 HPr Serine kinase C-terminal domain CA943_RS01090 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CA943_RS01095 PF00005 ABC transporter CA943_RS01115 PF00571 CBS domain CA943_RS01115 PF01380 SIS domain CA943_RS01120 PF00156 Phosphoribosyl transferase domain CA943_RS01125 PF00585 C-terminal regulatory domain of Threonine dehydratase CA943_RS01125 PF00291 Pyridoxal-phosphate dependent enzyme CA943_RS01130 PF00512 His Kinase A (phospho-acceptor) domain CA943_RS01130 PF11808 Phosphate regulon sensor protein PhoR CA943_RS01130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CA943_RS01130 PF00989 PAS fold CA943_RS01135 PF00072 Response regulator receiver domain CA943_RS01135 PF00486 Transcriptional regulatory protein, C terminal CA943_RS01140 PF01209 ubiE/COQ5 methyltransferase family CA943_RS01150 PF03109 ABC1 family CA943_RS01155 PF01467 Cytidylyltransferase-like CA943_RS01165 PF08543 Phosphomethylpyrimidine kinase CA943_RS01170 PF03976 Polyphosphate kinase 2 (PPK2) CA943_RS01175 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CA943_RS01175 PF07992 Pyridine nucleotide-disulphide oxidoreductase CA943_RS01185 PF06508 Queuosine biosynthesis protein QueC CA943_RS01190 PF01242 6-pyruvoyl tetrahydropterin synthase CA943_RS01195 PF04055 Radical SAM superfamily CA943_RS01220 PF01488 Shikimate / quinate 5-dehydrogenase CA943_RS01220 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CA943_RS01220 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CA943_RS01225 PF03462 PCRF domain CA943_RS01225 PF00472 RF-1 domain CA943_RS01230 PF17827 PrmC N-terminal domain CA943_RS01230 PF13847 Methyltransferase domain CA943_RS01235 PF00462 Glutaredoxin CA943_RS01240 PF02441 Flavoprotein CA943_RS01250 PF00939 Sodium:sulfate symporter transmembrane region CA943_RS01255 PF01266 FAD dependent oxidoreductase CA943_RS01285 PF00202 Aminotransferase class-III CA943_RS01285 PF06968 Biotin and Thiamin Synthesis associated domain CA943_RS01285 PF04055 Radical SAM superfamily CA943_RS01290 PF00155 Aminotransferase class I and II CA943_RS01295 PF04301 Protein of unknown function (DUF452) CA943_RS01300 PF08241 Methyltransferase domain CA943_RS01310 PF03009 Glycerophosphoryl diester phosphodiesterase family CA943_RS01315 PF00107 Zinc-binding dehydrogenase CA943_RS01315 PF08240 Alcohol dehydrogenase GroES-like domain CA943_RS01330 PF01169 Uncharacterized protein family UPF0016 CA943_RS01335 PF04575 Protein of unknown function (DUF560) CA943_RS01340 PF14489 QueF-like protein CA943_RS01340 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term CA943_RS01345 PF01298 C-lobe and N-lobe beta barrels of Tf-binding protein B CA943_RS01345 PF17483 C-lobe handle domain of Tf-binding protein B CA943_RS01345 PF17484 N-Lobe handle Tf-binding protein B CA943_RS01350 PF00593 TonB dependent receptor CA943_RS01350 PF07715 TonB-dependent Receptor Plug Domain CA943_RS01355 PF01171 PP-loop family CA943_RS01365 PF07992 Pyridine nucleotide-disulphide oxidoreductase CA943_RS01370 PF13091 PLD-like domain CA943_RS01370 PF13396 Phospholipase_D-nuclease N-terminal CA943_RS01375 PF00528 Binding-protein-dependent transport system inner membrane component CA943_RS01380 PF00528 Binding-protein-dependent transport system inner membrane component CA943_RS01385 PF00497 Bacterial extracellular solute-binding proteins, family 3 CA943_RS01395 PF04055 Radical SAM superfamily CA943_RS01395 PF06968 Biotin and Thiamin Synthesis associated domain CA943_RS01400 PF00582 Universal stress protein family CA943_RS01405 PF00929 Exonuclease CA943_RS01410 PF00929 Exonuclease CA943_RS01420 PF00551 Formyl transferase CA943_RS01445 PF01510 N-acetylmuramoyl-L-alanine amidase CA943_RS01455 PF01578 Cytochrome C assembly protein CA943_RS01460 PF00448 SRP54-type protein, GTPase domain CA943_RS01460 PF02978 Signal peptide binding domain CA943_RS01460 PF02881 SRP54-type protein, helical bundle domain CA943_RS01465 PF01476 LysM domain CA943_RS01465 PF04972 BON domain CA943_RS01470 PF02390 Putative methyltransferase CA943_RS01475 PF01588 Putative tRNA binding domain CA943_RS01475 PF09334 tRNA synthetases class I (M) CA943_RS01485 PF10609 NUBPL iron-transfer P-loop NTPase CA943_RS01500 PF00692 dUTPase CA943_RS01515 PF08669 Glycine cleavage T-protein C-terminal barrel domain CA943_RS01515 PF01571 Aminomethyltransferase folate-binding domain CA943_RS01520 PF01597 Glycine cleavage H-protein CA943_RS01525 PF02347 Glycine cleavage system P-protein CA943_RS01530 PF00303 Thymidylate synthase CA943_RS01535 PF00186 Dihydrofolate reductase CA943_RS01540 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CA943_RS01540 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CA943_RS01540 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CA943_RS01545 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CA943_RS01545 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CA943_RS01545 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CA943_RS01545 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CA943_RS01550 PF01565 FAD binding domain CA943_RS01550 PF02913 FAD linked oxidases, C-terminal domain CA943_RS01555 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) CA943_RS01555 PF13181 Tetratricopeptide repeat CA943_RS01560 PF03550 Outer membrane lipoprotein LolB CA943_RS01565 PF08544 GHMP kinases C terminal CA943_RS01565 PF00288 GHMP kinases N terminal domain CA943_RS01575 PF14572 Phosphoribosyl synthetase-associated domain CA943_RS01575 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CA943_RS01580 PF14693 Ribosomal protein TL5, C-terminal domain CA943_RS01580 PF01386 Ribosomal L25p family CA943_RS01590 PF13018 Extended Signal Peptide of Type V secretion system CA943_RS01590 PF03895 YadA-like membrane anchor domain CA943_RS01590 PF15401 Tryptophan-ring motif of head of Trimeric autotransporter adhesin CA943_RS01590 PF05662 Coiled stalk of trimeric autotransporter adhesin CA943_RS01605 PF05662 Coiled stalk of trimeric autotransporter adhesin CA943_RS01605 PF03895 YadA-like membrane anchor domain CA943_RS01605 PF05658 Head domain of trimeric autotransporter adhesin CA943_RS01610 PF01195 Peptidyl-tRNA hydrolase CA943_RS01620 PF06071 Protein of unknown function (DUF933) CA943_RS01620 PF01926 50S ribosome-binding GTPase CA943_RS01625 PF00037 4Fe-4S binding domain CA943_RS01630 PF01467 Cytidylyltransferase-like CA943_RS01640 PF00448 SRP54-type protein, GTPase domain CA943_RS01640 PF02881 SRP54-type protein, helical bundle domain CA943_RS01655 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CA943_RS01655 PF00925 GTP cyclohydrolase II CA943_RS01660 PF00885 6,7-dimethyl-8-ribityllumazine synthase CA943_RS01665 PF01029 NusB family CA943_RS01670 PF00586 AIR synthase related protein, N-terminal domain CA943_RS01670 PF02769 AIR synthase related protein, C-terminal domain CA943_RS01675 PF04608 Phosphatidylglycerophosphatase A CA943_RS01680 PF02464 Competence-damaged protein CA943_RS01685 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CA943_RS01690 PF01219 Prokaryotic diacylglycerol kinase CA943_RS01695 PF00118 TCP-1/cpn60 chaperonin family CA943_RS01700 PF00166 Chaperonin 10 Kd subunit CA943_RS01705 PF00497 Bacterial extracellular solute-binding proteins, family 3 CA943_RS01720 PF00561 alpha/beta hydrolase fold CA943_RS01730 PF00691 OmpA family CA943_RS01735 PF04052 TolB amino-terminal domain CA943_RS01735 PF07676 WD40-like Beta Propeller Repeat CA943_RS01745 PF02472 Biopolymer transport protein ExbD/TolR CA943_RS01750 PF01618 MotA/TolQ/ExbB proton channel family CA943_RS01755 PF03061 Thioesterase superfamily CA943_RS01760 PF04073 Aminoacyl-tRNA editing domain CA943_RS01760 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CA943_RS01760 PF03129 Anticodon binding domain CA943_RS01765 PF00293 NUDIX domain CA943_RS01770 PF12631 MnmE helical domain CA943_RS01770 PF10396 GTP-binding protein TrmE N-terminus CA943_RS01770 PF01926 50S ribosome-binding GTPase CA943_RS01790 PF01790 Prolipoprotein diacylglyceryl transferase CA943_RS01795 PF01619 Proline dehydrogenase CA943_RS01795 PF14850 DNA-binding domain of Proline dehydrogenase CA943_RS01795 PF18327 Proline utilization A proline dehydrogenase N-terminal domain CA943_RS01795 PF00171 Aldehyde dehydrogenase family CA943_RS01800 PF00474 Sodium:solute symporter family CA943_RS01805 PF04072 Leucine carboxyl methyltransferase CA943_RS01845 PF05662 Coiled stalk of trimeric autotransporter adhesin CA943_RS01845 PF03895 YadA-like membrane anchor domain CA943_RS01845 PF05658 Head domain of trimeric autotransporter adhesin CA943_RS01850 PF00209 Sodium:neurotransmitter symporter family CA943_RS01855 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CA943_RS01855 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CA943_RS01860 PF00132 Bacterial transferase hexapeptide (six repeats) CA943_RS01870 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CA943_RS01875 PF01061 ABC-2 type transporter CA943_RS01880 PF14524 Wzt C-terminal domain CA943_RS01880 PF00005 ABC transporter CA943_RS01900 PF13537 Glutamine amidotransferase domain CA943_RS01900 PF00733 Asparagine synthase CA943_RS01910 PF02350 UDP-N-acetylglucosamine 2-epimerase CA943_RS01915 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CA943_RS01920 PF02397 Bacterial sugar transferase CA943_RS01935 PF01757 Acyltransferase family CA943_RS01940 PF02719 Polysaccharide biosynthesis protein CA943_RS01945 PF03971 Monomeric isocitrate dehydrogenase CA943_RS01955 PF01979 Amidohydrolase family CA943_RS01960 PF01596 O-methyltransferase CA943_RS01970 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CA943_RS01975 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CA943_RS01980 PF00528 Binding-protein-dependent transport system inner membrane component CA943_RS01985 PF12911 N-terminal TM domain of oligopeptide transport permease C CA943_RS01985 PF00528 Binding-protein-dependent transport system inner membrane component CA943_RS01990 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CA943_RS01990 PF00005 ABC transporter CA943_RS01995 PF00005 ABC transporter CA943_RS01995 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CA943_RS02000 PF08240 Alcohol dehydrogenase GroES-like domain CA943_RS02000 PF00550 Phosphopantetheine attachment site CA943_RS02000 PF00698 Acyl transferase domain CA943_RS02000 PF16197 Ketoacyl-synthetase C-terminal extension CA943_RS02000 PF08659 KR domain CA943_RS02000 PF02801 Beta-ketoacyl synthase, C-terminal domain CA943_RS02000 PF00109 Beta-ketoacyl synthase, N-terminal domain CA943_RS02000 PF14765 Polyketide synthase dehydratase CA943_RS02010 PF00121 Triosephosphate isomerase CA943_RS02015 PF03840 Preprotein translocase SecG subunit CA943_RS02035 PF00127 Copper binding proteins, plastocyanin/azurin family CA943_RS02040 PF13609 Gram-negative porin CA943_RS02045 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 CA943_RS02050 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CA943_RS02055 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CA943_RS02060 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CA943_RS02070 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CA943_RS02070 PF10531 SLBB domain CA943_RS02070 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CA943_RS02075 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal CA943_RS02075 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CA943_RS02075 PF00384 Molybdopterin oxidoreductase CA943_RS02080 PF00146 NADH dehydrogenase CA943_RS02085 PF12838 4Fe-4S dicluster domain CA943_RS02090 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 CA943_RS02095 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CA943_RS02100 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CA943_RS02100 PF00361 Proton-conducting membrane transporter CA943_RS02105 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus CA943_RS02105 PF00361 Proton-conducting membrane transporter CA943_RS02110 PF00361 Proton-conducting membrane transporter CA943_RS02125 PF17757 UvrB interaction domain CA943_RS02125 PF03461 TRCF domain CA943_RS02125 PF02559 CarD-like/TRCF domain CA943_RS02125 PF00270 DEAD/DEAH box helicase CA943_RS02125 PF00271 Helicase conserved C-terminal domain CA943_RS02130 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CA943_RS02130 PF02542 YgbB family CA943_RS02135 PF02627 Carboxymuconolactone decarboxylase family CA943_RS02140 PF00578 AhpC/TSA family CA943_RS02145 PF00512 His Kinase A (phospho-acceptor) domain CA943_RS02145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CA943_RS02145 PF00672 HAMP domain CA943_RS02150 PF00072 Response regulator receiver domain CA943_RS02150 PF00486 Transcriptional regulatory protein, C terminal CA943_RS02155 PF00814 Glycoprotease family CA943_RS02165 PF07690 Major Facilitator Superfamily CA943_RS02170 PF02463 RecF/RecN/SMC N terminal domain CA943_RS02170 PF06470 SMC proteins Flexible Hinge Domain CA943_RS02180 PF12826 Helix-hairpin-helix motif CA943_RS02180 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CA943_RS02180 PF03120 NAD-dependent DNA ligase OB-fold domain CA943_RS02180 PF01653 NAD-dependent DNA ligase adenylation domain CA943_RS02180 PF00533 BRCA1 C Terminus (BRCT) domain CA943_RS02195 PF04279 Intracellular septation protein A CA943_RS02220 PF12399 Branched-chain amino acid ATP-binding cassette transporter CA943_RS02220 PF00005 ABC transporter CA943_RS02225 PF00005 ABC transporter CA943_RS02230 PF00730 HhH-GPD superfamily base excision DNA repair protein CA943_RS02230 PF00633 Helix-hairpin-helix motif CA943_RS02230 PF10576 Iron-sulfur binding domain of endonuclease III CA943_RS02235 PF04060 Putative Fe-S cluster CA943_RS02240 PF00175 Oxidoreductase NAD-binding domain CA943_RS02240 PF00970 Oxidoreductase FAD-binding domain CA943_RS02245 PF00037 4Fe-4S binding domain CA943_RS02245 PF11953 Domain of unknown function (DUF3470) CA943_RS02250 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CA943_RS02250 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CA943_RS02255 PF02824 TGS domain CA943_RS02255 PF13291 ACT domain CA943_RS02255 PF04607 Region found in RelA / SpoT proteins CA943_RS02260 PF17848 Acetyl-coA carboxylase zinc finger domain CA943_RS02260 PF01039 Carboxyl transferase domain CA943_RS02265 PF10150 Ribonuclease E/G family CA943_RS02265 PF12111 Polyribonucleotide phosphorylase C terminal CA943_RS02265 PF00575 S1 RNA binding domain CA943_RS02270 PF00849 RNA pseudouridylate synthase CA943_RS02270 PF01479 S4 domain CA943_RS02275 PF13419 Haloacid dehalogenase-like hydrolase CA943_RS02280 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CA943_RS02285 PF02545 Maf-like protein CA943_RS02295 PF01783 Ribosomal L32p protein family CA943_RS02300 PF02504 Fatty acid synthesis protein CA943_RS02305 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CA943_RS02305 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CA943_RS02310 PF00698 Acyl transferase domain CA943_RS02320 PF00550 Phosphopantetheine attachment site CA943_RS02325 PF02801 Beta-ketoacyl synthase, C-terminal domain CA943_RS02325 PF00109 Beta-ketoacyl synthase, N-terminal domain CA943_RS02335 PF13180 PDZ domain CA943_RS02340 PF06421 GTP-binding protein LepA C-terminus CA943_RS02340 PF03144 Elongation factor Tu domain 2 CA943_RS02340 PF00009 Elongation factor Tu GTP binding domain CA943_RS02340 PF00679 Elongation factor G C-terminus CA943_RS02345 PF10502 Signal peptidase, peptidase S26 CA943_RS02350 PF00035 Double-stranded RNA binding motif CA943_RS02350 PF14622 Ribonuclease-III-like CA943_RS02355 PF01926 50S ribosome-binding GTPase CA943_RS02355 PF07650 KH domain CA943_RS02360 PF11967 Recombination protein O N terminal CA943_RS02360 PF02565 Recombination protein O C terminal CA943_RS02365 PF01027 Inhibitor of apoptosis-promoting Bax1 CA943_RS02375 PF02789 Cytosol aminopeptidase family, N-terminal domain CA943_RS02375 PF00883 Cytosol aminopeptidase family, catalytic domain CA943_RS02385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CA943_RS02385 PF03466 LysR substrate binding domain CA943_RS02390 PF00440 Bacterial regulatory proteins, tetR family CA943_RS02390 PF13977 BetI-type transcriptional repressor, C-terminal CA943_RS02400 PF00877 NlpC/P60 family CA943_RS02410 PF00557 Metallopeptidase family M24 CA943_RS02410 PF01321 Creatinase/Prolidase N-terminal domain CA943_RS02420 PF00471 Ribosomal protein L33 CA943_RS02425 PF00830 Ribosomal L28 family CA943_RS02430 PF01554 MatE CA943_RS02440 PF01197 Ribosomal protein L31 CA943_RS02445 PF04002 RadC-like JAB domain CA943_RS02450 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CA943_RS02455 PF02401 LytB protein CA943_RS02460 PF02545 Maf-like protein CA943_RS02465 PF02590 Predicted SPOUT methyltransferase CA943_RS02475 PF01467 Cytidylyltransferase-like CA943_RS02480 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CA943_RS02480 PF02843 Phosphoribosylglycinamide synthetase, C domain CA943_RS02480 PF02844 Phosphoribosylglycinamide synthetase, N domain CA943_RS02485 PF01709 Transcriptional regulator CA943_RS02490 PF05872 Bacterial protein of unknown function (DUF853) CA943_RS02495 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain CA943_RS02500 PF01433 Peptidase family M1 domain CA943_RS02500 PF17432 Domain of unknown function (DUF3458_C) ARM repeats CA943_RS02500 PF11940 Domain of unknown function (DUF3458) Ig-like fold CA943_RS02505 PF01523 Putative modulator of DNA gyrase CA943_RS02515 PF00206 Lyase CA943_RS02515 PF08328 Adenylosuccinate lyase C-terminal CA943_RS02520 PF01322 Cytochrome C' CA943_RS02540 PF01645 Conserved region in glutamate synthase CA943_RS02550 PF00545 ribonuclease CA943_RS02565 PF12848 ABC transporter CA943_RS02565 PF16326 ABC transporter C-terminal domain CA943_RS02565 PF00005 ABC transporter CA943_RS02570 PF13406 Transglycosylase SLT domain CA943_RS02575 PF11818 C-terminal domain of tail specific protease (DUF3340) CA943_RS02575 PF17804 Tail specific protease N-terminal domain CA943_RS02575 PF03572 Peptidase family S41 CA943_RS02575 PF00595 PDZ domain CA943_RS02580 PF04321 RmlD substrate binding domain CA943_RS02590 PF13419 Haloacid dehalogenase-like hydrolase CA943_RS02600 PF00691 OmpA family CA943_RS02605 PF00521 DNA gyrase/topoisomerase IV, subunit A CA943_RS02605 PF03989 DNA gyrase C-terminal domain, beta-propeller CA943_RS02610 PF00266 Aminotransferase class-V CA943_RS02615 PF01842 ACT domain CA943_RS02615 PF01817 Chorismate mutase type II CA943_RS02615 PF00800 Prephenate dehydratase CA943_RS02620 PF02153 Prephenate dehydrogenase CA943_RS02620 PF01842 ACT domain CA943_RS02625 PF02224 Cytidylate kinase CA943_RS02630 PF00575 S1 RNA binding domain CA943_RS02635 PF00216 Bacterial DNA-binding protein CA943_RS02645 PF18073 Rubredoxin metal binding domain CA943_RS02650 PF00294 pfkB family carbohydrate kinase CA943_RS02655 PF10531 SLBB domain CA943_RS02660 PF00403 Heavy-metal-associated domain CA943_RS02670 PF00115 Cytochrome C and Quinol oxidase polypeptide I CA943_RS02685 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CA943_RS02685 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP CA943_RS02690 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase CA943_RS02690 PF12801 4Fe-4S binding domain CA943_RS02690 PF13746 4Fe-4S dicluster domain CA943_RS02700 PF00027 Cyclic nucleotide-binding domain CA943_RS02700 PF13545 Crp-like helix-turn-helix domain CA943_RS02710 PF01430 Hsp33 protein CA943_RS02720 PF13193 AMP-binding enzyme C-terminal domain CA943_RS02720 PF00501 AMP-binding enzyme CA943_RS02720 PF16177 Acetyl-coenzyme A synthetase N-terminus CA943_RS02730 PF01170 Putative RNA methylase family UPF0020 CA943_RS02730 PF02926 THUMP domain CA943_RS02735 PF03653 Uncharacterised protein family (UPF0093) CA943_RS02750 PF08264 Anticodon-binding domain of tRNA CA943_RS02750 PF00133 tRNA synthetases class I (I, L, M and V) CA943_RS02750 PF13603 Leucyl-tRNA synthetase, Domain 2 CA943_RS02750 PF09334 tRNA synthetases class I (M) CA943_RS02755 PF07687 Peptidase dimerisation domain CA943_RS02755 PF01546 Peptidase family M20/M25/M40 CA943_RS02760 PF08007 Cupin superfamily protein CA943_RS02765 PF00488 MutS domain V CA943_RS02765 PF05190 MutS family domain IV CA943_RS02765 PF05192 MutS domain III CA943_RS02765 PF05188 MutS domain II CA943_RS02765 PF01624 MutS domain I CA943_RS02770 PF05552 Conserved TM helix CA943_RS02770 PF00924 Mechanosensitive ion channel CA943_RS02775 PF00588 SpoU rRNA Methylase family CA943_RS02780 PF00459 Inositol monophosphatase family CA943_RS02785 PF02673 Bacitracin resistance protein BacA CA943_RS02790 PF00149 Calcineurin-like phosphoesterase CA943_RS02795 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CA943_RS02805 PF09190 DALR domain CA943_RS02805 PF01406 tRNA synthetases class I (C) catalytic domain CA943_RS02810 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CA943_RS02815 PF09179 TilS substrate binding domain CA943_RS02815 PF01171 PP-loop family CA943_RS02830 PF16868 NMT1-like family CA943_RS02850 PF00005 ABC transporter CA943_RS02850 PF06472 ABC transporter transmembrane region 2 CA943_RS02855 PF00593 TonB dependent receptor CA943_RS02855 PF07715 TonB-dependent Receptor Plug Domain CA943_RS02860 PF01842 ACT domain CA943_RS02860 PF13840 ACT domain CA943_RS02860 PF00696 Amino acid kinase family CA943_RS02870 PF04461 Protein of unknown function (DUF520) CA943_RS02875 PF08207 Elongation factor P (EF-P) KOW-like domain CA943_RS02875 PF01132 Elongation factor P (EF-P) OB domain CA943_RS02875 PF09285 Elongation factor P, C-terminal CA943_RS02885 PF00155 Aminotransferase class I and II CA943_RS02890 PF06434 Aconitate hydratase 2 N-terminus CA943_RS02890 PF00330 Aconitase family (aconitate hydratase) CA943_RS02890 PF11791 Aconitate B N-terminal domain CA943_RS02905 PF00579 tRNA synthetases class I (W and Y) CA943_RS02910 PF01427 D-ala-D-ala dipeptidase CA943_RS02915 PF01569 PAP2 superfamily CA943_RS02925 PF13667 ThiC-associated domain CA943_RS02925 PF01964 Radical SAM ThiC family CA943_RS02935 PF07497 Rho termination factor, RNA-binding domain CA943_RS02935 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CA943_RS02935 PF07498 Rho termination factor, N-terminal domain CA943_RS02940 PF00085 Thioredoxin CA943_RS02945 PF00204 DNA gyrase B CA943_RS02945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CA943_RS02945 PF00986 DNA gyrase B subunit, carboxyl terminus CA943_RS02945 PF01751 Toprim domain CA943_RS02950 PF00521 DNA gyrase/topoisomerase IV, subunit A CA943_RS02955 PF00175 Oxidoreductase NAD-binding domain CA943_RS02955 PF00970 Oxidoreductase FAD-binding domain CA943_RS02955 PF00111 2Fe-2S iron-sulfur cluster binding domain CA943_RS02965 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CA943_RS02965 PF01411 tRNA synthetases class II (A) CA943_RS02965 PF02272 DHHA1 domain CA943_RS02970 PF01206 Sulfurtransferase TusA CA943_RS02975 PF00886 Ribosomal protein S16 CA943_RS02980 PF01782 RimM N-terminal domain CA943_RS02985 PF01746 tRNA (Guanine-1)-methyltransferase CA943_RS02990 PF01451 Low molecular weight phosphotyrosine protein phosphatase CA943_RS02995 PF02082 Transcriptional regulator CA943_RS03000 PF00266 Aminotransferase class-V CA943_RS03005 PF01592 NifU-like N terminal domain CA943_RS03010 PF01521 Iron-sulphur cluster biosynthesis CA943_RS03015 PF07743 HSCB C-terminal oligomerisation domain CA943_RS03020 PF00012 Hsp70 protein CA943_RS03025 PF00111 2Fe-2S iron-sulfur cluster binding domain CA943_RS03055 PF00152 tRNA synthetases class II (D, K and N) CA943_RS03055 PF01336 OB-fold nucleic acid binding domain CA943_RS03065 PF02272 DHHA1 domain CA943_RS03065 PF01368 DHH family CA943_RS03065 PF17768 RecJ OB domain CA943_RS03075 PF12704 MacB-like periplasmic core domain CA943_RS03075 PF02687 FtsX-like permease family CA943_RS03080 PF00005 ABC transporter CA943_RS03085 PF01494 FAD binding domain CA943_RS03090 PF01026 TatD related DNase CA943_RS03095 PF00753 Metallo-beta-lactamase superfamily CA943_RS03095 PF03772 Competence protein CA943_RS03100 PF02811 PHP domain CA943_RS03105 PF01272 Transcription elongation factor, GreA/GreB, C-term CA943_RS03105 PF03449 Transcription elongation factor, N-terminal CA943_RS03110 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ CA943_RS03115 PF13145 PPIC-type PPIASE domain CA943_RS03120 PF01632 Ribosomal protein L35 CA943_RS03125 PF00453 Ribosomal protein L20 CA943_RS03130 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CA943_RS03130 PF01409 tRNA synthetases class II core domain (F) CA943_RS03135 PF03147 Ferredoxin-fold anticodon binding domain CA943_RS03135 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CA943_RS03135 PF03483 B3/4 domain CA943_RS03135 PF03484 tRNA synthetase B5 domain CA943_RS03135 PF01588 Putative tRNA binding domain CA943_RS03140 PF00216 Bacterial DNA-binding protein CA943_RS03150 PF01177 Asp/Glu/Hydantoin racemase CA943_RS03155 PF01070 FMN-dependent dehydrogenase CA943_RS03160 PF00291 Pyridoxal-phosphate dependent enzyme CA943_RS03170 PF00580 UvrD/REP helicase N-terminal domain CA943_RS03170 PF13361 UvrD-like helicase C-terminal domain CA943_RS03170 PF12462 DNA helicase IV / RNA helicase N terminal CA943_RS03175 PF09424 Yqey-like protein CA943_RS03185 PF00768 D-alanyl-D-alanine carboxypeptidase CA943_RS03190 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal CA943_RS03190 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CA943_RS03190 PF02769 AIR synthase related protein, C-terminal domain CA943_RS03195 PF00571 CBS domain CA943_RS03195 PF00478 IMP dehydrogenase / GMP reductase domain CA943_RS03205 PF02540 NAD synthase CA943_RS03205 PF00117 Glutamine amidotransferase class-I CA943_RS03205 PF00958 GMP synthase C terminal domain CA943_RS03210 PF00270 DEAD/DEAH box helicase CA943_RS03210 PF13749 Putative ATP-dependent DNA helicase recG C-terminal CA943_RS03210 PF17191 RecG wedge domain CA943_RS03240 PF00474 Sodium:solute symporter family CA943_RS03250 PF03806 AbgT putative transporter family CA943_RS03255 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CA943_RS03265 PF07690 Major Facilitator Superfamily CA943_RS03275 PF00005 ABC transporter CA943_RS03300 PF04575 Protein of unknown function (DUF560) CA943_RS03305 PF00005 ABC transporter CA943_RS03305 PF00664 ABC transporter transmembrane region CA943_RS03310 PF00005 ABC transporter CA943_RS03310 PF00664 ABC transporter transmembrane region CA943_RS03315 PF03616 Sodium/glutamate symporter CA943_RS03320 PF00390 Malic enzyme, N-terminal domain CA943_RS03320 PF01515 Phosphate acetyl/butaryl transferase CA943_RS03320 PF03949 Malic enzyme, NAD binding domain CA943_RS03325 PF16078 2-oxoglutarate dehydrogenase N-terminus CA943_RS03325 PF02779 Transketolase, pyrimidine binding domain CA943_RS03325 PF16870 2-oxoglutarate dehydrogenase C-terminal CA943_RS03325 PF00676 Dehydrogenase E1 component CA943_RS03330 PF02817 e3 binding domain CA943_RS03330 PF00364 Biotin-requiring enzyme CA943_RS03330 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CA943_RS03335 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CA943_RS03335 PF07992 Pyridine nucleotide-disulphide oxidoreductase CA943_RS03340 PF03969 AFG1-like ATPase CA943_RS03345 PF13335 Magnesium chelatase, subunit ChlI C-terminal CA943_RS03345 PF01078 Magnesium chelatase, subunit ChlI CA943_RS03350 PF03180 NLPA lipoprotein CA943_RS03360 PF13291 ACT domain CA943_RS03360 PF02824 TGS domain CA943_RS03360 PF04607 Region found in RelA / SpoT proteins CA943_RS03365 PF01192 RNA polymerase Rpb6 CA943_RS03370 PF00625 Guanylate kinase CA943_RS03375 PF02562 PhoH-like protein CA943_RS03375 PF13638 PIN domain CA943_RS03380 PF00578 AhpC/TSA family CA943_RS03385 PF04430 Protein of unknown function (DUF498/DUF598) CA943_RS03390 PF03447 Homoserine dehydrogenase, NAD binding domain CA943_RS03390 PF00742 Homoserine dehydrogenase CA943_RS03390 PF01842 ACT domain CA943_RS03395 PF00291 Pyridoxal-phosphate dependent enzyme CA943_RS03395 PF14821 Threonine synthase N terminus CA943_RS03405 PF01168 Alanine racemase, N-terminal domain CA943_RS03405 PF00842 Alanine racemase, C-terminal domain CA943_RS03410 PF18073 Rubredoxin metal binding domain CA943_RS03415 PF13416 Bacterial extracellular solute-binding protein CA943_RS03420 PF08402 TOBE domain CA943_RS03420 PF00005 ABC transporter CA943_RS03425 PF00528 Binding-protein-dependent transport system inner membrane component CA943_RS03430 PF00528 Binding-protein-dependent transport system inner membrane component CA943_RS03435 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CA943_RS03440 PF01895 PhoU domain CA943_RS03445 PF04362 Bacterial Fe(2+) trafficking CA943_RS03455 PF07733 Bacterial DNA polymerase III alpha NTPase domain CA943_RS03455 PF14579 Helix-hairpin-helix motif CA943_RS03455 PF02811 PHP domain CA943_RS03455 PF01336 OB-fold nucleic acid binding domain CA943_RS03455 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CA943_RS03465 PF00664 ABC transporter transmembrane region CA943_RS03465 PF00005 ABC transporter CA943_RS03470 PF10150 Ribonuclease E/G family CA943_RS03470 PF00575 S1 RNA binding domain CA943_RS03475 PF01227 GTP cyclohydrolase I CA943_RS03505 PF00565 Staphylococcal nuclease homologue CA943_RS03510 PF00881 Nitroreductase family CA943_RS03515 PF03544 Gram-negative bacterial TonB protein C-terminal CA943_RS03520 PF01618 MotA/TolQ/ExbB proton channel family CA943_RS03525 PF02472 Biopolymer transport protein ExbD/TolR CA943_RS03535 PF04305 Protein of unknown function (DUF455) CA943_RS03540 PF00005 ABC transporter CA943_RS03540 PF06472 ABC transporter transmembrane region 2 CA943_RS03545 PF13673 Acetyltransferase (GNAT) domain CA943_RS03555 PF01925 Sulfite exporter TauE/SafE CA943_RS03560 PF00575 S1 RNA binding domain CA943_RS03560 PF00773 RNB domain CA943_RS03560 PF08461 Ribonuclease R winged-helix domain CA943_RS03560 PF17876 Cold shock domain CA943_RS03560 PF08206 Ribonuclease B OB domain CA943_RS03565 PF08032 RNA 2'-O ribose methyltransferase substrate binding CA943_RS03565 PF00588 SpoU rRNA Methylase family CA943_RS03570 PF01053 Cys/Met metabolism PLP-dependent enzyme CA943_RS03575 PF00216 Bacterial DNA-binding protein CA943_RS03580 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CA943_RS03585 PF00005 ABC transporter CA943_RS03595 PF02321 Outer membrane efflux protein CA943_RS03605 PF00764 Arginosuccinate synthase CA943_RS03610 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CA943_RS03610 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CA943_RS03620 PF01649 Ribosomal protein S20 CA943_RS03625 PF03023 Lipid II flippase MurJ CA943_RS03630 PF05191 Adenylate kinase, active site lid CA943_RS03635 PF02348 Cytidylyltransferase CA943_RS03640 PF03966 Trm112p-like protein CA943_RS03645 PF02606 Tetraacyldisaccharide-1-P 4'-kinase CA943_RS03650 PF13742 OB-fold nucleic acid binding domain CA943_RS03650 PF02601 Exonuclease VII, large subunit CA943_RS03655 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CA943_RS03655 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CA943_RS03660 PF13458 Periplasmic binding protein CA943_RS03665 PF14748 Pyrroline-5-carboxylate reductase dimerisation CA943_RS03665 PF03807 NADP oxidoreductase coenzyme F420-dependent CA943_RS03670 PF02653 Branched-chain amino acid transport system / permease component CA943_RS03675 PF02653 Branched-chain amino acid transport system / permease component CA943_RS03675 PF11862 Domain of unknown function (DUF3382) CA943_RS03680 PF00005 ABC transporter CA943_RS03680 PF12399 Branched-chain amino acid ATP-binding cassette transporter CA943_RS03685 PF00005 ABC transporter CA943_RS03690 PF02630 SCO1/SenC CA943_RS03695 PF01432 Peptidase family M3 CA943_RS03700 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CA943_RS03700 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CA943_RS03705 PF00196 Bacterial regulatory proteins, luxR family CA943_RS03705 PF00072 Response regulator receiver domain CA943_RS03710 PF00512 His Kinase A (phospho-acceptor) domain CA943_RS03710 PF00989 PAS fold CA943_RS03710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CA943_RS03715 PF00456 Transketolase, thiamine diphosphate binding domain CA943_RS03715 PF17831 Pyruvate dehydrogenase E1 component middle domain CA943_RS03720 PF00364 Biotin-requiring enzyme CA943_RS03720 PF02817 e3 binding domain CA943_RS03720 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CA943_RS03725 PF07992 Pyridine nucleotide-disulphide oxidoreductase CA943_RS03725 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CA943_RS03730 PF01292 Prokaryotic cytochrome b561 CA943_RS03735 PF02875 Mur ligase family, glutamate ligase domain CA943_RS03735 PF08245 Mur ligase middle domain CA943_RS03745 PF02674 Colicin V production protein CA943_RS03750 PF00156 Phosphoribosyl transferase domain CA943_RS03755 PF02423 Ornithine cyclodeaminase/mu-crystallin family CA943_RS03765 PF01914 MarC family integral membrane protein CA943_RS03770 PF01909 Nucleotidyltransferase domain CA943_RS03770 PF01966 HD domain CA943_RS03770 PF08335 GlnD PII-uridylyltransferase CA943_RS03775 PF00557 Metallopeptidase family M24 CA943_RS03780 PF00318 Ribosomal protein S2 CA943_RS03785 PF00889 Elongation factor TS CA943_RS03790 PF00696 Amino acid kinase family CA943_RS03795 PF01765 Ribosome recycling factor CA943_RS03800 PF01255 Putative undecaprenyl diphosphate synthase CA943_RS03810 PF13288 DXP reductoisomerase C-terminal domain CA943_RS03810 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CA943_RS03810 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CA943_RS03815 PF02163 Peptidase family M50 CA943_RS03815 PF17820 PDZ domain CA943_RS03820 PF07244 Surface antigen variable number repeat CA943_RS03820 PF01103 Surface antigen CA943_RS03825 PF03938 Outer membrane protein (OmpH-like) CA943_RS03830 PF00132 Bacterial transferase hexapeptide (six repeats) CA943_RS03830 PF14602 Hexapeptide repeat of succinyl-transferase CA943_RS03830 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD CA943_RS03835 PF07977 FabA-like domain CA943_RS03840 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 CA943_RS03840 PF00132 Bacterial transferase hexapeptide (six repeats) CA943_RS03845 PF02684 Lipid-A-disaccharide synthetase CA943_RS03850 PF01351 Ribonuclease HII CA943_RS03860 PF00588 SpoU rRNA Methylase family CA943_RS03860 PF08032 RNA 2'-O ribose methyltransferase substrate binding CA943_RS03865 PF03618 Kinase/pyrophosphorylase CA943_RS03870 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CA943_RS03870 PF02896 PEP-utilising enzyme, TIM barrel domain CA943_RS03870 PF00391 PEP-utilising enzyme, mobile domain CA943_RS03880 PF01145 SPFH domain / Band 7 family CA943_RS03885 PF01668 SmpB protein CA943_RS03890 PF03364 Polyketide cyclase / dehydrase and lipid transport CA943_RS03895 PF03658 RnfH family Ubiquitin CA943_RS03900 PF01571 Aminomethyltransferase folate-binding domain CA943_RS03905 PF02618 YceG-like family CA943_RS03910 PF02223 Thymidylate kinase CA943_RS03915 PF09115 DNA polymerase III, delta subunit, C terminal CA943_RS03920 PF01026 TatD related DNase CA943_RS03930 PF03334 Na+/H+ antiporter subunit CA943_RS03935 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) CA943_RS03940 PF01899 Na+/H+ ion antiporter subunit CA943_RS03945 PF00361 Proton-conducting membrane transporter CA943_RS03950 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CA943_RS03955 PF13244 Domain of unknown function (DUF4040) CA943_RS03955 PF00361 Proton-conducting membrane transporter CA943_RS03955 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CA943_RS03955 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter CA943_RS03965 PF00529 HlyD membrane-fusion protein of T1SS CA943_RS03965 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CA943_RS03970 PF00873 AcrB/AcrD/AcrF family CA943_RS03975 PF02321 Outer membrane efflux protein CA943_RS03980 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ CA943_RS03985 PF00881 Nitroreductase family CA943_RS03990 PF00171 Aldehyde dehydrogenase family CA943_RS04000 PF00873 AcrB/AcrD/AcrF family CA943_RS04005 PF00873 AcrB/AcrD/AcrF family CA943_RS04010 PF13533 Biotin-lipoyl like CA943_RS04015 PF00892 EamA-like transporter family CA943_RS04025 PF03401 Tripartite tricarboxylate transporter family receptor CA943_RS04035 PF03372 Endonuclease/Exonuclease/phosphatase family CA943_RS04045 PF01479 S4 domain CA943_RS04045 PF00849 RNA pseudouridylate synthase CA943_RS04050 PF00543 Nitrogen regulatory protein P-II CA943_RS04055 PF00795 Carbon-nitrogen hydrolase CA943_RS04055 PF02540 NAD synthase CA943_RS04060 PF14698 Argininosuccinate lyase C-terminal CA943_RS04060 PF00206 Lyase CA943_RS04065 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CA943_RS04070 PF02631 RecX family CA943_RS04075 PF00154 recA bacterial DNA recombination protein CA943_RS04090 PF00271 Helicase conserved C-terminal domain CA943_RS04090 PF02151 UvrB/uvrC motif CA943_RS04090 PF17757 UvrB interaction domain CA943_RS04090 PF04851 Type III restriction enzyme, res subunit CA943_RS04090 PF12344 Ultra-violet resistance protein B CA943_RS04095 PF00155 Aminotransferase class I and II CA943_RS04100 PF01726 LexA DNA binding domain CA943_RS04100 PF00717 Peptidase S24-like CA943_RS04110 PF16868 NMT1-like family CA943_RS04120 PF01594 AI-2E family transporter CA943_RS04145 PF14602 Hexapeptide repeat of succinyl-transferase CA943_RS04145 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal CA943_RS04145 PF00132 Bacterial transferase hexapeptide (six repeats) CA943_RS04150 PF01546 Peptidase family M20/M25/M40 CA943_RS04150 PF07687 Peptidase dimerisation domain CA943_RS04155 PF05175 Methyltransferase small domain CA943_RS04160 PF12848 ABC transporter CA943_RS04160 PF00005 ABC transporter CA943_RS04165 PF00005 ABC transporter CA943_RS04170 PF02653 Branched-chain amino acid transport system / permease component CA943_RS04180 PF01416 tRNA pseudouridine synthase CA943_RS04185 PF01118 Semialdehyde dehydrogenase, NAD binding domain CA943_RS04185 PF02774 Semialdehyde dehydrogenase, dimerisation domain CA943_RS04190 PF00180 Isocitrate/isopropylmalate dehydrogenase CA943_RS04195 PF00694 Aconitase C-terminal domain CA943_RS04200 PF00330 Aconitase family (aconitate hydratase) CA943_RS04210 PF03631 Virulence factor BrkB CA943_RS04215 PF00111 2Fe-2S iron-sulfur cluster binding domain CA943_RS04220 PF00268 Ribonucleotide reductase, small chain CA943_RS04225 PF02867 Ribonucleotide reductase, barrel domain CA943_RS04225 PF00317 Ribonucleotide reductase, all-alpha domain CA943_RS04225 PF03477 ATP cone domain CA943_RS04230 PF01207 Dihydrouridine synthase (Dus) CA943_RS04235 PF00654 Voltage gated chloride channel CA943_RS04240 PF01636 Phosphotransferase enzyme family CA943_RS04250 PF00766 Electron transfer flavoprotein FAD-binding domain CA943_RS04250 PF01012 Electron transfer flavoprotein domain CA943_RS04255 PF01012 Electron transfer flavoprotein domain CA943_RS04260 PF01066 CDP-alcohol phosphatidyltransferase CA943_RS04265 PF01541 GIY-YIG catalytic domain CA943_RS04265 PF02151 UvrB/uvrC motif CA943_RS04265 PF08459 UvrC Helix-hairpin-helix N-terminal CA943_RS04270 PF00933 Glycosyl hydrolase family 3 N terminal domain CA943_RS04275 PF01648 4'-phosphopantetheinyl transferase superfamily CA943_RS04280 PF00929 Exonuclease CA943_RS04285 PF03193 RsgA GTPase CA943_RS04290 PF01245 Ribosomal protein L19 CA943_RS04310 PF00437 Type II/IV secretion system protein CA943_RS04315 PF13629 Pilus formation protein N terminal region CA943_RS04315 PF04972 BON domain CA943_RS04315 PF00263 Bacterial type II and III secretion system protein CA943_RS04345 PF03167 Uracil DNA glycosylase superfamily CA943_RS04360 PF04545 Sigma-70, region 4 CA943_RS04360 PF04546 Sigma-70, non-essential region CA943_RS04360 PF04539 Sigma-70 region 3 CA943_RS04360 PF04542 Sigma-70 region 2 CA943_RS04360 PF00140 Sigma-70 factor, region 1.2 CA943_RS04360 PF03979 Sigma-70 factor, region 1.1 CA943_RS04365 PF10410 DnaB-helicase binding domain of primase CA943_RS04365 PF01807 CHC2 zinc finger CA943_RS04365 PF08275 DNA primase catalytic core, N-terminal domain CA943_RS04365 PF08278 DNA primase DnaG DnaB-binding CA943_RS04370 PF01165 Ribosomal protein S21 CA943_RS04375 PF00156 Phosphoribosyl transferase domain CA943_RS04380 PF00709 Adenylosuccinate synthetase CA943_RS04385 PF01145 SPFH domain / Band 7 family CA943_RS04390 PF01145 SPFH domain / Band 7 family CA943_RS04395 PF01926 50S ribosome-binding GTPase CA943_RS04395 PF13167 GTP-binding GTPase N-terminal CA943_RS04395 PF16360 GTP-binding GTPase Middle Region CA943_RS04400 PF17209 Hfq protein CA943_RS04405 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CA943_RS04405 PF01926 50S ribosome-binding GTPase CA943_RS04410 PF13360 PQQ-like domain CA943_RS04415 PF09976 Tetratricopeptide repeat-like domain CA943_RS04420 PF13393 Histidyl-tRNA synthetase CA943_RS04420 PF03129 Anticodon binding domain CA943_RS04425 PF04551 GcpE protein CA943_RS04435 PF04055 Radical SAM superfamily CA943_RS04440 PF00334 Nucleoside diphosphate kinase CA943_RS04445 PF00133 tRNA synthetases class I (I, L, M and V) CA943_RS04445 PF08264 Anticodon-binding domain of tRNA CA943_RS04445 PF10458 Valyl tRNA synthetase tRNA binding arm CA943_RS04455 PF00719 Inorganic pyrophosphatase CA943_RS04475 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CA943_RS04475 PF03900 Porphobilinogen deaminase, C-terminal domain CA943_RS04480 PF03741 Integral membrane protein TerC family CA943_RS04485 PF00549 CoA-ligase CA943_RS04485 PF02629 CoA binding domain CA943_RS04490 PF08442 ATP-grasp domain CA943_RS04490 PF00549 CoA-ligase CA943_RS04510 PF05958 tRNA (Uracil-5-)-methyltransferase CA943_RS04520 PF01551 Peptidase family M23 CA943_RS04520 PF01476 LysM domain CA943_RS04530 PF01975 Survival protein SurE CA943_RS04535 PF02660 Glycerol-3-phosphate acyltransferase CA943_RS04540 PF00814 Glycoprotease family CA943_RS04545 PF00860 Permease family CA943_RS04550 PF01205 Uncharacterized protein family UPF0029 CA943_RS04555 PF00005 ABC transporter CA943_RS04555 PF12848 ABC transporter CA943_RS04560 PF17676 LD-carboxypeptidase C-terminal domain CA943_RS04560 PF02016 LD-carboxypeptidase N-terminal domain CA943_RS04565 PF14437 MafB19-like deaminase CA943_RS04570 PF00145 C-5 cytosine-specific DNA methylase CA943_RS04580 PF00145 C-5 cytosine-specific DNA methylase CA943_RS04585 PF05726 Pirin C-terminal cupin domain CA943_RS04585 PF02678 Pirin CA943_RS04595 PF07715 TonB-dependent Receptor Plug Domain CA943_RS04595 PF00593 TonB dependent receptor CA943_RS04600 PF00842 Alanine racemase, C-terminal domain CA943_RS04600 PF01168 Alanine racemase, N-terminal domain CA943_RS04630 PF02492 CobW/HypB/UreG, nucleotide-binding domain CA943_RS04630 PF07683 Cobalamin synthesis protein cobW C-terminal domain CA943_RS04640 PF01522 Polysaccharide deacetylase CA943_RS04645 PF00005 ABC transporter CA943_RS04645 PF08402 TOBE domain CA943_RS04655 PF01547 Bacterial extracellular solute-binding protein CA943_RS04675 PF00285 Citrate synthase, C-terminal domain CA943_RS04680 PF03937 Flavinator of succinate dehydrogenase CA943_RS04685 PF13085 2Fe-2S iron-sulfur cluster binding domain CA943_RS04690 PF00890 FAD binding domain CA943_RS04690 PF02910 Fumarate reductase flavoprotein C-term CA943_RS04700 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CA943_RS04705 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CA943_RS04705 PF00056 lactate/malate dehydrogenase, NAD binding domain CA943_RS04710 PF00171 Aldehyde dehydrogenase family CA943_RS04740 PF05593 RHS Repeat CA943_RS04740 PF03527 RHS protein CA943_RS04750 PF05593 RHS Repeat CA943_RS04750 PF03527 RHS protein CA943_RS04760 PF05593 RHS Repeat CA943_RS04760 PF03527 RHS protein CA943_RS04770 PF03527 RHS protein CA943_RS04770 PF05593 RHS Repeat CA943_RS04780 PF06715 Gp5 C-terminal repeat (3 copies) CA943_RS04780 PF04717 Type VI secretion system, phage-baseplate injector CA943_RS04795 PF04717 Type VI secretion system, phage-baseplate injector CA943_RS04805 PF04717 Type VI secretion system, phage-baseplate injector CA943_RS04815 PF04380 Membrane fusogenic activity CA943_RS04820 PF02861 Clp amino terminal domain, pathogenicity island component CA943_RS04820 PF10431 C-terminal, D2-small domain, of ClpB protein CA943_RS04820 PF17871 AAA lid domain CA943_RS04820 PF00004 ATPase family associated with various cellular activities (AAA) CA943_RS04820 PF07724 AAA domain (Cdc48 subfamily) CA943_RS04830 PF04977 Septum formation initiator CA943_RS04835 PF03952 Enolase, N-terminal domain CA943_RS04835 PF00113 Enolase, C-terminal TIM barrel domain CA943_RS04840 PF00793 DAHP synthetase I family CA943_RS04845 PF00117 Glutamine amidotransferase class-I CA943_RS04845 PF06418 CTP synthase N-terminus CA943_RS04855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CA943_RS04855 PF03466 LysR substrate binding domain CA943_RS04860 PF01266 FAD dependent oxidoreductase CA943_RS04865 PF03553 Na+/H+ antiporter family CA943_RS04870 PF00171 Aldehyde dehydrogenase family CA943_RS04875 PF02423 Ornithine cyclodeaminase/mu-crystallin family CA943_RS04880 PF00375 Sodium:dicarboxylate symporter family CA943_RS04885 PF00202 Aminotransferase class-III CA943_RS04890 PF07063 Domain of unknown function (DUF1338) CA943_RS04920 PF04325 Protein of unknown function (DUF465) CA943_RS04930 PF00593 TonB dependent receptor CA943_RS04930 PF07715 TonB-dependent Receptor Plug Domain CA943_RS04940 PF01243 Pyridoxamine 5'-phosphate oxidase CA943_RS04940 PF10615 Protein of unknown function (DUF2470) CA943_RS04955 PF00679 Elongation factor G C-terminus CA943_RS04955 PF00009 Elongation factor Tu GTP binding domain CA943_RS04955 PF03144 Elongation factor Tu domain 2 CA943_RS04960 PF01509 TruB family pseudouridylate synthase (N terminal domain) CA943_RS04960 PF16198 tRNA pseudouridylate synthase B C-terminal domain CA943_RS04965 PF02033 Ribosome-binding factor A CA943_RS04970 PF08364 Bacterial translation initiation factor IF-2 associated region CA943_RS04970 PF11987 Translation-initiation factor 2 CA943_RS04970 PF04760 Translation initiation factor IF-2, N-terminal region CA943_RS04970 PF00009 Elongation factor Tu GTP binding domain CA943_RS04975 PF08529 NusA N-terminal domain CA943_RS04975 PF13184 NusA-like KH domain CA943_RS04980 PF02576 RimP N-terminal domain CA943_RS04980 PF17384 RimP C-terminal SH3 domain CA943_RS04985 PF00849 RNA pseudouridylate synthase CA943_RS04985 PF01479 S4 domain CA943_RS04990 PF04079 Segregation and condensation complex subunit ScpB CA943_RS05000 PF01479 S4 domain CA943_RS05000 PF00849 RNA pseudouridylate synthase CA943_RS05005 PF13525 Outer membrane lipoprotein CA943_RS05010 PF13438 Domain of unknown function (DUF4113) CA943_RS05010 PF11799 impB/mucB/samB family C-terminal domain CA943_RS05010 PF11798 IMS family HHH motif CA943_RS05010 PF00817 impB/mucB/samB family CA943_RS05015 PF00717 Peptidase S24-like CA943_RS05020 PF00580 UvrD/REP helicase N-terminal domain CA943_RS05020 PF13361 UvrD-like helicase C-terminal domain CA943_RS05025 PF01029 NusB family CA943_RS05025 PF01189 16S rRNA methyltransferase RsmB/F CA943_RS05030 PF00551 Formyl transferase CA943_RS05035 PF06574 FAD synthetase CA943_RS05035 PF01687 Riboflavin kinase CA943_RS05040 PF08264 Anticodon-binding domain of tRNA CA943_RS05040 PF00133 tRNA synthetases class I (I, L, M and V) CA943_RS05040 PF06827 Zinc finger found in FPG and IleRS CA943_RS05045 PF01252 Signal peptidase (SPase) II CA943_RS05050 PF04127 DNA / pantothenate metabolism flavoprotein CA943_RS05050 PF02441 Flavoprotein CA943_RS05055 PF09335 SNARE associated Golgi protein CA943_RS05060 PF00692 dUTPase CA943_RS05065 PF00593 TonB dependent receptor CA943_RS05065 PF07715 TonB-dependent Receptor Plug Domain CA943_RS05070 PF17484 N-Lobe handle Tf-binding protein B CA943_RS05070 PF17483 C-lobe handle domain of Tf-binding protein B CA943_RS05070 PF01298 C-lobe and N-lobe beta barrels of Tf-binding protein B CA943_RS05080 PF00004 ATPase family associated with various cellular activities (AAA) CA943_RS05080 PF07724 AAA domain (Cdc48 subfamily) CA943_RS05080 PF10431 C-terminal, D2-small domain, of ClpB protein CA943_RS05080 PF17871 AAA lid domain CA943_RS05080 PF02861 Clp amino terminal domain, pathogenicity island component CA943_RS05085 PF00313 'Cold-shock' DNA-binding domain CA943_RS05095 PF03466 LysR substrate binding domain CA943_RS05095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CA943_RS05100 PF00270 DEAD/DEAH box helicase CA943_RS05100 PF00271 Helicase conserved C-terminal domain CA943_RS05100 PF17191 RecG wedge domain CA943_RS05105 PF01042 Endoribonuclease L-PSP CA943_RS05110 PF13416 Bacterial extracellular solute-binding protein CA943_RS05115 PF00528 Binding-protein-dependent transport system inner membrane component CA943_RS05120 PF00005 ABC transporter CA943_RS05120 PF08402 TOBE domain CA943_RS05130 PF03951 Glutamine synthetase, beta-Grasp domain CA943_RS05130 PF00120 Glutamine synthetase, catalytic domain CA943_RS05135 PF06969 HemN C-terminal domain CA943_RS05135 PF04055 Radical SAM superfamily CA943_RS05140 PF01725 Ham1 family CA943_RS05145 PF01138 3' exoribonuclease family, domain 1 CA943_RS05145 PF03725 3' exoribonuclease family, domain 2 CA943_RS05150 PF03755 YicC-like family, N-terminal region CA943_RS05150 PF08340 Domain of unknown function (DUF1732) CA943_RS05155 PF03796 DnaB-like helicase C terminal domain CA943_RS05155 PF00772 DnaB-like helicase N terminal domain CA943_RS05160 PF03948 Ribosomal protein L9, C-terminal domain CA943_RS05160 PF01281 Ribosomal protein L9, N-terminal domain CA943_RS05165 PF01084 Ribosomal protein S18 CA943_RS05175 PF01250 Ribosomal protein S6 CA943_RS05180 PF02649 Type I GTP cyclohydrolase folE2 CA943_RS05185 PF02779 Transketolase, pyrimidine binding domain CA943_RS05185 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CA943_RS05185 PF02780 Transketolase, C-terminal domain CA943_RS05190 PF00348 Polyprenyl synthetase CA943_RS05195 PF02609 Exonuclease VII small subunit CA943_RS05205 PF01979 Amidohydrolase family CA943_RS05210 PF00221 Aromatic amino acid lyase CA943_RS05215 PF17392 Urocanase C-terminal domain CA943_RS05215 PF01175 Urocanase Rossmann-like domain CA943_RS05215 PF17391 Urocanase N-terminal domain CA943_RS05220 PF00392 Bacterial regulatory proteins, gntR family CA943_RS05220 PF07702 UTRA domain CA943_RS05225 PF00581 Rhodanese-like domain CA943_RS05235 PF01435 Peptidase family M48 CA943_RS05240 PF01367 5'-3' exonuclease, C-terminal SAM fold CA943_RS05240 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CA943_RS05240 PF00476 DNA polymerase family A CA943_RS05240 PF01612 3'-5' exonuclease CA943_RS05245 PF03641 Possible lysine decarboxylase CA943_RS05260 PF00391 PEP-utilising enzyme, mobile domain CA943_RS05260 PF02896 PEP-utilising enzyme, TIM barrel domain CA943_RS05260 PF05524 PEP-utilising enzyme, N-terminal CA943_RS05265 PF00381 PTS HPr component phosphorylation site CA943_RS05275 PF05198 Translation initiation factor IF-3, N-terminal domain CA943_RS05275 PF00707 Translation initiation factor IF-3, C-terminal domain CA943_RS05280 PF03129 Anticodon binding domain CA943_RS05280 PF02824 TGS domain CA943_RS05280 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CA943_RS05280 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CA943_RS05290 PF02190 ATP-dependent protease La (LON) substrate-binding domain CA943_RS05290 PF05362 Lon protease (S16) C-terminal proteolytic domain CA943_RS05290 PF00004 ATPase family associated with various cellular activities (AAA) CA943_RS05295 PF10431 C-terminal, D2-small domain, of ClpB protein CA943_RS05295 PF06689 ClpX C4-type zinc finger CA943_RS05295 PF07724 AAA domain (Cdc48 subfamily) CA943_RS05300 PF00574 Clp protease CA943_RS05305 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CA943_RS05305 PF05698 Bacterial trigger factor protein (TF) C-terminus CA943_RS05305 PF05697 Bacterial trigger factor protein (TF) CA943_RS05315 PF03710 Glutamate-ammonia ligase adenylyltransferase CA943_RS05315 PF08335 GlnD PII-uridylyltransferase CA943_RS05320 PF02677 Epoxyqueuosine reductase QueH CA943_RS05345 PF01464 Transglycosylase SLT domain CA943_RS05360 PF03135 CagE, TrbE, VirB family, component of type IV transporter system CA943_RS05435 PF08401 Domain of unknown function (DUF1738) CA943_RS05435 PF13362 Toprim domain CA943_RS05435 PF18818 Metallopeptidase superfamily domain CA943_RS05450 PF04335 VirB8 protein CA943_RS05455 PF03524 Conjugal transfer protein CA943_RS05460 PF03743 Bacterial conjugation TrbI-like protein CA943_RS05480 PF00437 Type II/IV secretion system protein CA943_RS05485 PF02534 Type IV secretory system Conjugative DNA transfer CA943_RS05570 PF00589 Phage integrase family CA943_RS05570 PF13356 Arm DNA-binding domain CA943_RS05585 PF13291 ACT domain CA943_RS05585 PF02824 TGS domain CA943_RS05585 PF04607 Region found in RelA / SpoT proteins CA943_RS05595 PF00701 Dihydrodipicolinate synthetase family CA943_RS05600 PF06804 NlpB/DapX lipoprotein CA943_RS05630 PF00005 ABC transporter CA943_RS05630 PF02687 FtsX-like permease family CA943_RS05630 PF12704 MacB-like periplasmic core domain CA943_RS05640 PF03781 Sulfatase-modifying factor enzyme 1 CA943_RS05660 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CA943_RS05660 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CA943_RS05665 PF00593 TonB dependent receptor CA943_RS05665 PF07715 TonB-dependent Receptor Plug Domain CA943_RS05670 PF01138 3' exoribonuclease family, domain 1 CA943_RS05670 PF00575 S1 RNA binding domain CA943_RS05670 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CA943_RS05670 PF03725 3' exoribonuclease family, domain 2 CA943_RS05670 PF00013 KH domain CA943_RS05675 PF00312 Ribosomal protein S15 CA943_RS05685 PF01235 Sodium:alanine symporter family CA943_RS05690 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CA943_RS05690 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CA943_RS05695 PF10369 Small subunit of acetolactate synthase CA943_RS05700 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CA943_RS05700 PF00205 Thiamine pyrophosphate enzyme, central domain CA943_RS05700 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CA943_RS05705 PF03883 Peroxide stress protein YaaA CA943_RS05710 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CA943_RS05710 PF02403 Seryl-tRNA synthetase N-terminal domain CA943_RS05715 PF00004 ATPase family associated with various cellular activities (AAA) CA943_RS05715 PF12002 MgsA AAA+ ATPase C terminal CA943_RS05715 PF16193 AAA C-terminal domain CA943_RS05720 PF03548 Outer membrane lipoprotein carrier protein LolA CA943_RS05725 PF13491 4TM region of DNA translocase FtsK/SpoIIIE CA943_RS05725 PF17854 FtsK alpha domain CA943_RS05725 PF01580 FtsK/SpoIIIE family CA943_RS05725 PF09397 Ftsk gamma domain CA943_RS05730 PF07992 Pyridine nucleotide-disulphide oxidoreductase CA943_RS05740 PF04284 Protein of unknown function (DUF441) CA943_RS05750 PF03601 Conserved hypothetical protein 698 CA943_RS05760 PF03797 Autotransporter beta-domain CA943_RS05765 PF00684 DnaJ central domain CA943_RS05765 PF01556 DnaJ C terminal domain CA943_RS05765 PF00226 DnaJ domain CA943_RS05770 PF00012 Hsp70 protein CA943_RS05775 PF01025 GrpE CA943_RS05780 PF00132 Bacterial transferase hexapeptide (six repeats) CA943_RS05785 PF00762 Ferrochelatase CA943_RS05790 PF01628 HrcA protein C terminal domain CA943_RS05790 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding CA943_RS05795 PF01513 ATP-NAD kinase CA943_RS05800 PF02463 RecF/RecN/SMC N terminal domain CA943_RS05805 PF01113 Dihydrodipicolinate reductase, N-terminus CA943_RS05805 PF05173 Dihydrodipicolinate reductase, C-terminus CA943_RS05810 PF04355 SmpA / OmlA family CA943_RS05815 PF01475 Ferric uptake regulator family CA943_RS05820 PF01565 FAD binding domain CA943_RS05820 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CA943_RS05830 PF01545 Cation efflux family CA943_RS05840 PF00145 C-5 cytosine-specific DNA methylase CA943_RS05840 PF01381 Helix-turn-helix CA943_RS05845 PF04261 Dyp-type peroxidase family CA943_RS05855 PF00005 ABC transporter CA943_RS05860 PF00528 Binding-protein-dependent transport system inner membrane component CA943_RS05865 PF00528 Binding-protein-dependent transport system inner membrane component CA943_RS05870 PF12849 PBP superfamily domain CA943_RS05875 PF02541 Ppx/GppA phosphatase family CA943_RS05885 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CA943_RS05885 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CA943_RS05885 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CA943_RS05885 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CA943_RS05890 PF00809 Pterin binding enzyme CA943_RS05895 PF01434 Peptidase family M41 CA943_RS05895 PF06480 FtsH Extracellular CA943_RS05895 PF17862 AAA+ lid domain CA943_RS05895 PF00004 ATPase family associated with various cellular activities (AAA) CA943_RS05900 PF01728 FtsJ-like methyltransferase CA943_RS05905 PF01985 CRS1 / YhbY (CRM) domain CA943_RS05910 PF03449 Transcription elongation factor, N-terminal CA943_RS05910 PF01272 Transcription elongation factor, GreA/GreB, C-term CA943_RS05915 PF00860 Permease family CA943_RS05920 PF00210 Ferritin-like domain CA943_RS05925 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CA943_RS05925 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CA943_RS05925 PF02142 MGS-like domain CA943_RS05930 PF00117 Glutamine amidotransferase class-I CA943_RS05930 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CA943_RS05935 PF02132 RecR protein CA943_RS05935 PF13662 Toprim domain CA943_RS05940 PF02575 YbaB/EbfC DNA-binding family CA943_RS05950 PF12170 DNA polymerase III tau subunit V interacting with alpha CA943_RS05950 PF12169 DNA polymerase III subunits gamma and tau domain III CA943_RS05950 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding CA943_RS05960 PF12705 PD-(D/E)XK nuclease superfamily CA943_RS05960 PF13361 UvrD-like helicase C-terminal domain CA943_RS05960 PF00580 UvrD/REP helicase N-terminal domain CA943_RS05980 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CA943_RS05995 PF00589 Phage integrase family CA943_RS05995 PF02899 Phage integrase, N-terminal SAM-like domain CA943_RS06000 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CA943_RS06005 PF01520 N-acetylmuramoyl-L-alanine amidase CA943_RS06005 PF11741 AMIN domain CA943_RS06010 PF08676 MutL C terminal dimerisation domain CA943_RS06010 PF01119 DNA mismatch repair protein, C-terminal domain CA943_RS06020 PF00586 AIR synthase related protein, N-terminal domain CA943_RS06020 PF02769 AIR synthase related protein, C-terminal domain CA943_RS06025 PF00308 Bacterial dnaA protein CA943_RS06025 PF08299 Bacterial dnaA protein helix-turn-helix CA943_RS06025 PF11638 DnaA N-terminal domain CA943_RS06030 PF12627 Probable RNA and SrmB- binding site of polymerase A CA943_RS06030 PF01743 Poly A polymerase head domain CA943_RS06030 PF12626 Polymerase A arginine-rich C-terminus CA943_RS06035 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CA943_RS06040 PF00483 Nucleotidyl transferase CA943_RS06045 PF00342 Phosphoglucose isomerase CA943_RS06050 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CA943_RS06090 PF01180 Dihydroorotate dehydrogenase CA943_RS06100 PF00270 DEAD/DEAH box helicase CA943_RS06100 PF00271 Helicase conserved C-terminal domain CA943_RS06110 PF01207 Dihydrouridine synthase (Dus) CA943_RS06115 PF02954 Bacterial regulatory protein, Fis family CA943_RS06120 PF02142 MGS-like domain CA943_RS06120 PF01808 AICARFT/IMPCHase bienzyme CA943_RS06125 PF02075 Crossover junction endodeoxyribonuclease RuvC CA943_RS06130 PF01330 RuvA N terminal domain CA943_RS06130 PF07499 RuvA, C-terminal domain CA943_RS06140 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CA943_RS06145 PF05496 Holliday junction DNA helicase RuvB P-loop domain CA943_RS06145 PF17864 RuvB AAA lid domain CA943_RS06145 PF05491 RuvB C-terminal winged helix domain CA943_RS06150 PF01266 FAD dependent oxidoreductase CA943_RS06160 PF05690 Thiazole biosynthesis protein ThiG CA943_RS06200 PF05430 S-adenosyl-L-methionine-dependent methyltransferase CA943_RS06200 PF01266 FAD dependent oxidoreductase CA943_RS06205 PF03448 MgtE intracellular N domain CA943_RS06205 PF00571 CBS domain CA943_RS06205 PF01769 Divalent cation transporter CA943_RS06210 PF07516 SecA Wing and Scaffold domain CA943_RS06210 PF01043 SecA preprotein cross-linking domain CA943_RS06210 PF07517 SecA DEAD-like domain CA943_RS06210 PF02810 SEC-C motif CA943_RS06215 PF01551 Peptidase family M23 CA943_RS06215 PF01476 LysM domain CA943_RS06215 PF08525 Opacity-associated protein A N-terminal motif CA943_RS06225 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase CA943_RS06230 PF12327 FtsZ family, C-terminal domain CA943_RS06230 PF00091 Tubulin/FtsZ family, GTPase domain CA943_RS06235 PF02491 SHS2 domain inserted in FTSA CA943_RS06240 PF03799 Cell division protein FtsQ CA943_RS06240 PF08478 POTRA domain, FtsQ-type CA943_RS06245 PF01820 D-ala D-ala ligase N-terminus CA943_RS06245 PF07478 D-ala D-ala ligase C-terminus CA943_RS06250 PF08245 Mur ligase middle domain CA943_RS06250 PF02875 Mur ligase family, glutamate ligase domain CA943_RS06250 PF01225 Mur ligase family, catalytic domain CA943_RS06255 PF03033 Glycosyltransferase family 28 N-terminal domain CA943_RS06255 PF04101 Glycosyltransferase family 28 C-terminal domain CA943_RS06260 PF01098 Cell cycle protein CA943_RS06265 PF08245 Mur ligase middle domain CA943_RS06265 PF02875 Mur ligase family, glutamate ligase domain CA943_RS06270 PF00953 Glycosyl transferase family 4 CA943_RS06275 PF02875 Mur ligase family, glutamate ligase domain CA943_RS06275 PF08245 Mur ligase middle domain CA943_RS06275 PF01225 Mur ligase family, catalytic domain CA943_RS06280 PF00905 Penicillin binding protein transpeptidase domain CA943_RS06280 PF03717 Penicillin-binding Protein dimerisation domain CA943_RS06290 PF01795 MraW methylase family CA943_RS06295 PF02381 MraZ protein, putative antitoxin-like CA943_RS06305 PF06628 Catalase-related immune-responsive CA943_RS06305 PF00199 Catalase CA943_RS06310 PF02091 Glycyl-tRNA synthetase alpha subunit CA943_RS06315 PF02092 Glycyl-tRNA synthetase beta subunit CA943_RS06315 PF05746 DALR anticodon binding domain CA943_RS06335 PF00398 Ribosomal RNA adenine dimethylase CA943_RS06340 PF00639 PPIC-type PPIASE domain CA943_RS06340 PF09312 SurA N-terminal domain CA943_RS06345 PF04453 LPS transport system D CA943_RS06350 PF01636 Phosphotransferase enzyme family CA943_RS06355 PF00483 Nucleotidyl transferase CA943_RS06365 PF00072 Response regulator receiver domain CA943_RS06365 PF00486 Transcriptional regulatory protein, C terminal CA943_RS06370 PF00672 HAMP domain CA943_RS06370 PF00512 His Kinase A (phospho-acceptor) domain CA943_RS06370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CA943_RS06375 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain CA943_RS06375 PF00749 tRNA synthetases class I (E and Q), catalytic domain CA943_RS06380 PF03775 Septum formation inhibitor MinC, C-terminal domain CA943_RS06380 PF05209 Septum formation inhibitor MinC, N-terminal domain CA943_RS06385 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CA943_RS06390 PF03776 Septum formation topological specificity factor MinE CA943_RS06395 PF12848 ABC transporter CA943_RS06395 PF00005 ABC transporter CA943_RS06405 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CA943_RS06410 PF00005 ABC transporter CA943_RS06410 PF17755 UvrA DNA-binding domain CA943_RS06410 PF17760 UvrA interaction domain CA943_RS06415 PF00899 ThiF family CA943_RS06420 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region CA943_RS06420 PF01243 Pyridoxamine 5'-phosphate oxidase CA943_RS06425 PF00034 Cytochrome c CA943_RS06425 PF03150 Di-haem cytochrome c peroxidase CA943_RS06430 PF03481 Putative GTP-binding controlling metal-binding CA943_RS06430 PF01300 Telomere recombination CA943_RS06435 PF02222 ATP-grasp domain CA943_RS06435 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CA943_RS06440 PF00731 AIR carboxylase CA943_RS06445 PF01259 SAICAR synthetase CA943_RS06450 PF01116 Fructose-bisphosphate aldolase class-II CA943_RS06455 PF00795 Carbon-nitrogen hydrolase CA943_RS06460 PF00162 Phosphoglycerate kinase CA943_RS06465 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CA943_RS06465 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CA943_RS06470 PF02779 Transketolase, pyrimidine binding domain CA943_RS06470 PF02780 Transketolase, C-terminal domain CA943_RS06470 PF00456 Transketolase, thiamine diphosphate binding domain CA943_RS06475 PF04452 RNA methyltransferase CA943_RS06490 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase CA943_RS06515 PF02547 Queuosine biosynthesis protein CA943_RS06520 PF01702 Queuine tRNA-ribosyltransferase CA943_RS06525 PF02699 Preprotein translocase subunit CA943_RS06530 PF07549 SecD/SecF GG Motif CA943_RS06530 PF13721 SecD export protein N-terminal TM region CA943_RS06530 PF02355 Protein export membrane protein CA943_RS06535 PF07549 SecD/SecF GG Motif CA943_RS06535 PF02355 Protein export membrane protein CA943_RS06540 PF00919 Uncharacterized protein family UPF0004 CA943_RS06540 PF04055 Radical SAM superfamily CA943_RS06540 PF01938 TRAM domain CA943_RS06545 PF02562 PhoH-like protein CA943_RS06550 PF02130 Uncharacterized protein family UPF0054 CA943_RS06555 PF03471 Transporter associated domain CA943_RS06555 PF00571 CBS domain CA943_RS06560 PF00795 Carbon-nitrogen hydrolase CA943_RS06575 PF13018 Extended Signal Peptide of Type V secretion system CA943_RS06575 PF05662 Coiled stalk of trimeric autotransporter adhesin CA943_RS06575 PF03895 YadA-like membrane anchor domain CA943_RS06575 PF05658 Head domain of trimeric autotransporter adhesin CA943_RS06580 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CA943_RS06580 PF00005 ABC transporter CA943_RS06585 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CA943_RS06590 PF00528 Binding-protein-dependent transport system inner membrane component CA943_RS06595 PF00528 Binding-protein-dependent transport system inner membrane component CA943_RS06595 PF12911 N-terminal TM domain of oligopeptide transport permease C CA943_RS06600 PF03576 Peptidase family S58 CA943_RS06610 PF01112 Asparaginase CA943_RS06615 PF00075 RNase H CA943_RS06625 PF00753 Metallo-beta-lactamase superfamily CA943_RS06625 PF16123 Hydroxyacylglutathione hydrolase C-terminus CA943_RS06630 PF01464 Transglycosylase SLT domain CA943_RS06630 PF01476 LysM domain CA943_RS06635 PF00691 OmpA family CA943_RS06635 PF01389 OmpA-like transmembrane domain CA943_RS06645 PF00677 Lumazine binding domain CA943_RS06650 PF01872 RibD C-terminal domain CA943_RS06650 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CA943_RS06655 PF03477 ATP cone domain CA943_RS06660 PF00464 Serine hydroxymethyltransferase CA943_RS06665 PF00579 tRNA synthetases class I (W and Y) CA943_RS06665 PF01479 S4 domain CA943_RS06670 PF03702 Anhydro-N-acetylmuramic acid kinase CA943_RS06675 PF01521 Iron-sulphur cluster biosynthesis CA943_RS06685 PF00380 Ribosomal protein S9/S16 CA943_RS06690 PF00572 Ribosomal protein L13 CA943_RS06695 PF01523 Putative modulator of DNA gyrase CA943_RS06700 PF04751 Protein of unknown function (DUF615) CA943_RS06705 PF02230 Phospholipase/Carboxylesterase CA943_RS06710 PF00749 tRNA synthetases class I (E and Q), catalytic domain CA943_RS06725 PF00294 pfkB family carbohydrate kinase CA943_RS06740 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CA943_RS06740 PF00289 Biotin carboxylase, N-terminal domain CA943_RS06740 PF02785 Biotin carboxylase C-terminal domain CA943_RS06745 PF00364 Biotin-requiring enzyme CA943_RS06750 PF01225 Mur ligase family, catalytic domain CA943_RS06750 PF02875 Mur ligase family, glutamate ligase domain CA943_RS06750 PF08245 Mur ligase middle domain CA943_RS06755 PF00773 RNB domain CA943_RS06755 PF08206 Ribonuclease B OB domain CA943_RS06765 PF00149 Calcineurin-like phosphoesterase CA943_RS06770 PF01553 Acyltransferase CA943_RS06775 PF01979 Amidohydrolase family CA943_RS06780 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CA943_RS06780 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CA943_RS06785 PF03652 Holliday junction resolvase CA943_RS06795 PF00301 Rubredoxin CA943_RS06800 PF02581 Thiamine monophosphate synthase CA943_RS06805 PF00202 Aminotransferase class-III CA943_RS06810 PF00271 Helicase conserved C-terminal domain CA943_RS06810 PF00270 DEAD/DEAH box helicase CA943_RS06820 PF01743 Poly A polymerase head domain CA943_RS06820 PF12627 Probable RNA and SrmB- binding site of polymerase A CA943_RS06855 PF03527 RHS protein CA943_RS06855 PF05593 RHS Repeat CA943_RS06865 PF04717 Type VI secretion system, phage-baseplate injector CA943_RS06865 PF06715 Gp5 C-terminal repeat (3 copies) CA943_RS06875 PF04328 Selenoprotein, putative CA943_RS06880 PF13722 5TM C-terminal transporter carbon starvation CstA CA943_RS06880 PF02554 Carbon starvation protein CstA CA943_RS06895 PF05145 Transition state regulatory protein AbrB CA943_RS06900 PF01970 Tripartite tricarboxylate transporter TctA family CA943_RS06915 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CA943_RS06915 PF05221 S-adenosyl-L-homocysteine hydrolase CA943_RS06920 PF02773 S-adenosylmethionine synthetase, C-terminal domain CA943_RS06920 PF00438 S-adenosylmethionine synthetase, N-terminal domain CA943_RS06920 PF02772 S-adenosylmethionine synthetase, central domain CA943_RS06925 PF03279 Bacterial lipid A biosynthesis acyltransferase CA943_RS06930 PF00156 Phosphoribosyl transferase domain CA943_RS06935 PF03372 Endonuclease/Exonuclease/phosphatase family CA943_RS06940 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain CA943_RS06940 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain CA943_RS06945 PF07690 Major Facilitator Superfamily CA943_RS06950 PF00561 alpha/beta hydrolase fold CA943_RS06955 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CA943_RS06965 PF00375 Sodium:dicarboxylate symporter family CA943_RS06970 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain CA943_RS06970 PF01276 Orn/Lys/Arg decarboxylase, major domain CA943_RS06970 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CA943_RS06980 PF00005 ABC transporter CA943_RS06990 PF00245 Alkaline phosphatase CA943_RS06995 PF00196 Bacterial regulatory proteins, luxR family CA943_RS06995 PF00072 Response regulator receiver domain CA943_RS07005 PF00034 Cytochrome c CA943_RS07005 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CA943_RS07010 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CA943_RS07015 PF03150 Di-haem cytochrome c peroxidase CA943_RS07070 PF04386 Stringent starvation protein B CA943_RS07075 PF00043 Glutathione S-transferase, C-terminal domain CA943_RS07075 PF02798 Glutathione S-transferase, N-terminal domain CA943_RS07080 PF02167 Cytochrome C1 family CA943_RS07085 PF00033 Cytochrome b/b6/petB CA943_RS07085 PF00032 Cytochrome b(C-terminal)/b6/petD CA943_RS07090 PF00355 Rieske [2Fe-2S] domain CA943_RS07090 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal CA943_RS07095 PF01741 Large-conductance mechanosensitive channel, MscL CA943_RS07100 PF01784 NIF3 (NGG1p interacting factor 3) CA943_RS07105 PF00595 PDZ domain CA943_RS07110 PF00902 Sec-independent protein translocase protein (TatC) CA943_RS07115 PF02416 mttA/Hcf106 family CA943_RS07120 PF02416 mttA/Hcf106 family CA943_RS07125 PF00977 Histidine biosynthesis protein CA943_RS07130 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CA943_RS07140 PF01061 ABC-2 type transporter CA943_RS07145 PF00005 ABC transporter CA943_RS07155 PF04333 MlaA lipoprotein CA943_RS07160 PF02470 MlaD protein CA943_RS07165 PF02405 Permease MlaE CA943_RS07170 PF00005 ABC transporter CA943_RS07175 PF02481 DNA recombination-mediator protein A CA943_RS07175 PF18255 DNA processing protein A sterile alpha motif domain CA943_RS07180 PF01327 Polypeptide deformylase CA943_RS07185 PF01168 Alanine racemase, N-terminal domain CA943_RS07190 PF01595 Cyclin M transmembrane N-terminal domain CA943_RS07190 PF03471 Transporter associated domain CA943_RS07190 PF00571 CBS domain CA943_RS07195 PF01380 SIS domain CA943_RS07200 PF01625 Peptide methionine sulfoxide reductase CA943_RS07200 PF08534 Redoxin CA943_RS07200 PF01641 SelR domain CA943_RS07210 PF00436 Single-strand binding protein family CA943_RS07215 PF00436 Single-strand binding protein family CA943_RS07220 PF07690 Major Facilitator Superfamily CA943_RS07225 PF17760 UvrA interaction domain CA943_RS07225 PF17755 UvrA DNA-binding domain CA943_RS07230 PF07715 TonB-dependent Receptor Plug Domain CA943_RS07230 PF00593 TonB dependent receptor CA943_RS07235 PF13286 Phosphohydrolase-associated domain CA943_RS07235 PF01966 HD domain CA943_RS07240 PF00912 Transglycosylase CA943_RS07240 PF17092 Penicillin-binding protein OB-like domain CA943_RS07240 PF00905 Penicillin binding protein transpeptidase domain CA943_RS07245 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CA943_RS07245 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CA943_RS07255 PF01491 Frataxin-like domain CA943_RS07260 PF01578 Cytochrome C assembly protein CA943_RS07265 PF05140 ResB-like family CA943_RS07275 PF01926 50S ribosome-binding GTPase CA943_RS07285 PF00490 Delta-aminolevulinic acid dehydratase CA943_RS07290 PF02683 Cytochrome C biogenesis protein transmembrane region CA943_RS07290 PF11412 Disulphide bond corrector protein DsbC CA943_RS07300 PF03616 Sodium/glutamate symporter CA943_RS07305 PF00491 Arginase family CA943_RS07320 PF01196 Ribosomal protein L17 CA943_RS07325 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CA943_RS07325 PF01000 RNA polymerase Rpb3/RpoA insert domain CA943_RS07325 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CA943_RS07330 PF01479 S4 domain CA943_RS07330 PF00163 Ribosomal protein S4/S9 N-terminal domain CA943_RS07335 PF00411 Ribosomal protein S11 CA943_RS07340 PF00416 Ribosomal protein S13/S18 CA943_RS07345 PF00444 Ribosomal protein L36 CA943_RS07350 PF01176 Translation initiation factor 1A / IF-1 CA943_RS07355 PF00344 SecY translocase CA943_RS07360 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CA943_RS07365 PF00327 Ribosomal protein L30p/L7e CA943_RS07370 PF00333 Ribosomal protein S5, N-terminal domain CA943_RS07370 PF03719 Ribosomal protein S5, C-terminal domain CA943_RS07375 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CA943_RS07380 PF00347 Ribosomal protein L6 CA943_RS07385 PF00410 Ribosomal protein S8 CA943_RS07390 PF00253 Ribosomal protein S14p/S29e CA943_RS07395 PF00281 Ribosomal protein L5 CA943_RS07395 PF00673 ribosomal L5P family C-terminus CA943_RS07400 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CA943_RS07405 PF00238 Ribosomal protein L14p/L23e CA943_RS07410 PF03553 Na+/H+ antiporter family CA943_RS07410 PF13726 Na+-H+ antiporter family CA943_RS07415 PF13726 Na+-H+ antiporter family CA943_RS07415 PF03553 Na+/H+ antiporter family CA943_RS07420 PF07732 Multicopper oxidase CA943_RS07420 PF00394 Multicopper oxidase CA943_RS07425 PF02630 SCO1/SenC CA943_RS07435 PF00403 Heavy-metal-associated domain CA943_RS07445 PF01970 Tripartite tricarboxylate transporter TctA family CA943_RS07455 PF00043 Glutathione S-transferase, C-terminal domain CA943_RS07455 PF02798 Glutathione S-transferase, N-terminal domain CA943_RS07460 PF13173 AAA domain CA943_RS07460 PF13635 Domain of unknown function (DUF4143) CA943_RS07475 PF05658 Head domain of trimeric autotransporter adhesin CA943_RS07475 PF05662 Coiled stalk of trimeric autotransporter adhesin CA943_RS07475 PF03895 YadA-like membrane anchor domain CA943_RS07480 PF13018 Extended Signal Peptide of Type V secretion system CA943_RS07480 PF15401 Tryptophan-ring motif of head of Trimeric autotransporter adhesin CA943_RS07480 PF03895 YadA-like membrane anchor domain CA943_RS07480 PF05662 Coiled stalk of trimeric autotransporter adhesin CA943_RS07490 PF05658 Head domain of trimeric autotransporter adhesin CA943_RS07490 PF13018 Extended Signal Peptide of Type V secretion system CA943_RS07490 PF05662 Coiled stalk of trimeric autotransporter adhesin CA943_RS07490 PF03895 YadA-like membrane anchor domain CA943_RS07490 PF05662 Coiled stalk of trimeric autotransporter adhesin CA943_RS07490 PF05658 Head domain of trimeric autotransporter adhesin CA943_RS07490 PF03895 YadA-like membrane anchor domain CA943_RS07490 PF13018 Extended Signal Peptide of Type V secretion system CA943_RS07495 PF03895 YadA-like membrane anchor domain CA943_RS07495 PF13018 Extended Signal Peptide of Type V secretion system CA943_RS07495 PF15401 Tryptophan-ring motif of head of Trimeric autotransporter adhesin CA943_RS07495 PF05662 Coiled stalk of trimeric autotransporter adhesin CA943_RS07500 PF00366 Ribosomal protein S17 CA943_RS07505 PF00831 Ribosomal L29 protein CA943_RS07510 PF00252 Ribosomal protein L16p/L10e CA943_RS07515 PF07650 KH domain CA943_RS07515 PF00189 Ribosomal protein S3, C-terminal domain CA943_RS07520 PF00237 Ribosomal protein L22p/L17e CA943_RS07525 PF00203 Ribosomal protein S19 CA943_RS07530 PF00181 Ribosomal Proteins L2, RNA binding domain CA943_RS07530 PF03947 Ribosomal Proteins L2, C-terminal domain CA943_RS07535 PF00276 Ribosomal protein L23 CA943_RS07540 PF00573 Ribosomal protein L4/L1 family CA943_RS07545 PF00297 Ribosomal protein L3 CA943_RS07550 PF02646 RmuC family CA943_RS07555 PF03180 NLPA lipoprotein CA943_RS07560 PF00528 Binding-protein-dependent transport system inner membrane component CA943_RS07565 PF00005 ABC transporter CA943_RS07565 PF09383 NIL domain CA943_RS07590 PF00338 Ribosomal protein S10p/S20e CA943_RS07595 PF00664 ABC transporter transmembrane region CA943_RS07595 PF00005 ABC transporter CA943_RS07605 PF00009 Elongation factor Tu GTP binding domain CA943_RS07605 PF03144 Elongation factor Tu domain 2 CA943_RS07605 PF03143 Elongation factor Tu C-terminal domain CA943_RS07610 PF03144 Elongation factor Tu domain 2 CA943_RS07610 PF03764 Elongation factor G, domain IV CA943_RS07610 PF00679 Elongation factor G C-terminus CA943_RS07610 PF00009 Elongation factor Tu GTP binding domain CA943_RS07610 PF14492 Elongation Factor G, domain II CA943_RS07615 PF00177 Ribosomal protein S7p/S5e CA943_RS07620 PF00164 Ribosomal protein S12/S23 CA943_RS07640 PF03328 HpcH/HpaI aldolase/citrate lyase family CA943_RS07645 PF02515 CoA-transferase family III CA943_RS07655 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CA943_RS07655 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CA943_RS07655 PF02770 Acyl-CoA dehydrogenase, middle domain CA943_RS07675 PF01555 DNA methylase CA943_RS07680 PF06945 Protein of unknown function (DUF1289) CA943_RS07685 PF00696 Amino acid kinase family CA943_RS07690 PF00202 Aminotransferase class-III CA943_RS07695 PF02774 Semialdehyde dehydrogenase, dimerisation domain CA943_RS07695 PF01118 Semialdehyde dehydrogenase, NAD binding domain CA943_RS07710 PF00491 Arginase family CA943_RS07715 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CA943_RS07715 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CA943_RS07720 PF04983 RNA polymerase Rpb1, domain 3 CA943_RS07720 PF04998 RNA polymerase Rpb1, domain 5 CA943_RS07720 PF00623 RNA polymerase Rpb1, domain 2 CA943_RS07720 PF04997 RNA polymerase Rpb1, domain 1 CA943_RS07720 PF05000 RNA polymerase Rpb1, domain 4 CA943_RS07725 PF00562 RNA polymerase Rpb2, domain 6 CA943_RS07725 PF04561 RNA polymerase Rpb2, domain 2 CA943_RS07725 PF04565 RNA polymerase Rpb2, domain 3 CA943_RS07725 PF10385 RNA polymerase beta subunit external 1 domain CA943_RS07725 PF04560 RNA polymerase Rpb2, domain 7 CA943_RS07725 PF04563 RNA polymerase beta subunit CA943_RS07730 PF00542 Ribosomal protein L7/L12 C-terminal domain CA943_RS07730 PF16320 Ribosomal protein L7/L12 dimerisation domain CA943_RS07735 PF00466 Ribosomal protein L10 CA943_RS07740 PF00687 Ribosomal protein L1p/L10e family CA943_RS07745 PF00298 Ribosomal protein L11, RNA binding domain CA943_RS07745 PF03946 Ribosomal protein L11, N-terminal domain CA943_RS07750 PF02357 Transcription termination factor nusG CA943_RS07750 PF00467 KOW motif CA943_RS07755 PF00584 SecE/Sec61-gamma subunits of protein translocation complex CA943_RS07765 PF00009 Elongation factor Tu GTP binding domain CA943_RS07765 PF03143 Elongation factor Tu C-terminal domain CA943_RS07765 PF03144 Elongation factor Tu domain 2 CA943_RS07790 PF02195 ParB-like nuclease domain CA943_RS07790 PF17762 HTH domain found in ParB protein CA943_RS07795 PF13614 AAA domain CA943_RS07800 PF02527 rRNA small subunit methyltransferase G CA943_RS07805 PF01134 Glucose inhibited division protein A CA943_RS07805 PF13932 GidA associated domain CA943_RS07810 PF01230 HIT domain CA943_RS07815 PF02096 60Kd inner membrane protein CA943_RS07815 PF14849 YidC periplasmic domain CA943_RS07820 PF01809 Putative membrane protein insertion efficiency factor CA943_RS07825 PF00825 Ribonuclease P CA943_RS07830 PF00468 Ribosomal protein L34