locus-tag class description KUI_RS00005 PF00308 Bacterial dnaA protein KUI_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix KUI_RS00005 PF11638 DnaA N-terminal domain KUI_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain KUI_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain KUI_RS00010 PF02767 DNA polymerase III beta subunit, central domain KUI_RS00015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KUI_RS00015 PF00986 DNA gyrase B subunit, carboxyl terminus KUI_RS00015 PF18053 DNA gyrase B subunit insert domain KUI_RS00015 PF01751 Toprim domain KUI_RS00015 PF00204 DNA gyrase B KUI_RS00020 PF00849 RNA pseudouridylate synthase KUI_RS00020 PF01479 S4 domain KUI_RS00025 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KUI_RS00025 PF00005 ABC transporter KUI_RS00030 PF00528 Binding-protein-dependent transport system inner membrane component KUI_RS00035 PF00528 Binding-protein-dependent transport system inner membrane component KUI_RS00035 PF12911 N-terminal TM domain of oligopeptide transport permease C KUI_RS00040 PF00005 ABC transporter KUI_RS00040 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KUI_RS00045 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KUI_RS00055 PF00580 UvrD/REP helicase N-terminal domain KUI_RS00055 PF13361 UvrD-like helicase C-terminal domain KUI_RS00060 PF00970 Oxidoreductase FAD-binding domain KUI_RS00060 PF00175 Oxidoreductase NAD-binding domain KUI_RS00070 PF01751 Toprim domain KUI_RS00070 PF01131 DNA topoisomerase KUI_RS00075 PF04055 Radical SAM superfamily KUI_RS00075 PF06969 HemN C-terminal domain KUI_RS00085 PF00749 tRNA synthetases class I (E and Q), catalytic domain KUI_RS00090 PF04361 Protein of unknown function (DUF494) KUI_RS00100 PF00085 Thioredoxin KUI_RS00100 PF01323 DSBA-like thioredoxin domain KUI_RS00110 PF00750 tRNA synthetases class I (R) KUI_RS00110 PF05746 DALR anticodon binding domain KUI_RS00110 PF03485 Arginyl tRNA synthetase N terminal domain KUI_RS00120 PF08502 LeuA allosteric (dimerisation) domain KUI_RS00120 PF00682 HMGL-like KUI_RS00140 PF00210 Ferritin-like domain KUI_RS00150 PF03144 Elongation factor Tu domain 2 KUI_RS00150 PF16658 Class II release factor RF3, C-terminal domain KUI_RS00150 PF00009 Elongation factor Tu GTP binding domain KUI_RS00170 PF01926 50S ribosome-binding GTPase KUI_RS00170 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal KUI_RS00190 PF03956 Lysine exporter LysO KUI_RS00195 PF00497 Bacterial extracellular solute-binding proteins, family 3 KUI_RS00200 PF00528 Binding-protein-dependent transport system inner membrane component KUI_RS00205 PF00528 Binding-protein-dependent transport system inner membrane component KUI_RS00210 PF00005 ABC transporter KUI_RS00215 PF01925 Sulfite exporter TauE/SafE KUI_RS00230 PF01040 UbiA prenyltransferase family KUI_RS00240 PF01336 OB-fold nucleic acid binding domain KUI_RS00240 PF00152 tRNA synthetases class II (D, K and N) KUI_RS00240 PF02938 GAD domain KUI_RS00250 PF02163 Peptidase family M50 KUI_RS00255 PF01075 Glycosyltransferase family 9 (heptosyltransferase) KUI_RS00260 PF00534 Glycosyl transferases group 1 KUI_RS00260 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) KUI_RS00270 PF03309 Type III pantothenate kinase KUI_RS00280 PF02129 X-Pro dipeptidyl-peptidase (S15 family) KUI_RS00285 PF07943 Penicillin-binding protein 5, C-terminal domain KUI_RS00285 PF00768 D-alanyl-D-alanine carboxypeptidase KUI_RS00290 PF01063 Amino-transferase class IV KUI_RS00295 PF04359 Protein of unknown function (DUF493) KUI_RS00300 PF03099 Biotin/lipoate A/B protein ligase family KUI_RS00315 PF04055 Radical SAM superfamily KUI_RS00315 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family KUI_RS00320 PF16363 GDP-mannose 4,6 dehydratase KUI_RS00325 PF07690 Major Facilitator Superfamily KUI_RS00330 PF12804 MobA-like NTP transferase domain KUI_RS00330 PF14602 Hexapeptide repeat of succinyl-transferase KUI_RS00330 PF00132 Bacterial transferase hexapeptide (six repeats) KUI_RS00340 PF00140 Sigma-70 factor, region 1.2 KUI_RS00340 PF04542 Sigma-70 region 2 KUI_RS00340 PF04545 Sigma-70, region 4 KUI_RS00350 PF00270 DEAD/DEAH box helicase KUI_RS00350 PF00271 Helicase conserved C-terminal domain KUI_RS00350 PF03880 DbpA RNA binding domain KUI_RS00355 PF02911 Formyl transferase, C-terminal domain KUI_RS00355 PF00551 Formyl transferase KUI_RS00360 PF01029 NusB family KUI_RS00360 PF01189 16S rRNA methyltransferase RsmB/F KUI_RS00370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KUI_RS00370 PF00672 HAMP domain KUI_RS00375 PF02954 Bacterial regulatory protein, Fis family KUI_RS00375 PF00072 Response regulator receiver domain KUI_RS00375 PF00158 Sigma-54 interaction domain KUI_RS00380 PF02254 TrkA-N domain KUI_RS00380 PF02080 TrkA-C domain KUI_RS00385 PF02386 Cation transport protein KUI_RS00390 PF00588 SpoU rRNA Methylase family KUI_RS00395 PF00156 Phosphoribosyl transferase domain KUI_RS00400 PF08241 Methyltransferase domain KUI_RS00410 PF00004 ATPase family associated with various cellular activities (AAA) KUI_RS00410 PF07724 AAA domain (Cdc48 subfamily) KUI_RS00410 PF17871 AAA lid domain KUI_RS00410 PF10431 C-terminal, D2-small domain, of ClpB protein KUI_RS00430 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE KUI_RS00435 PF00691 OmpA family KUI_RS00435 PF13677 Membrane MotB of proton-channel complex MotA/MotB KUI_RS00440 PF06761 Intracellular multiplication and human macrophage-killing KUI_RS00440 PF14331 ImcF-related N-terminal domain KUI_RS00440 PF06744 Type VI secretion protein IcmF C-terminal KUI_RS00460 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 KUI_RS00465 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath KUI_RS00470 PF05638 Type VI secretion system effector, Hcp KUI_RS00475 PF07024 ImpE protein KUI_RS00480 PF04965 Gene 25-like lysozyme KUI_RS00485 PF05947 Type VI secretion system, TssF KUI_RS00495 PF07715 TonB-dependent Receptor Plug Domain KUI_RS00495 PF00593 TonB dependent receptor KUI_RS00550 PF04717 Type VI secretion system, phage-baseplate injector KUI_RS00550 PF06715 Gp5 C-terminal repeat (3 copies) KUI_RS00710 PF02556 Preprotein translocase subunit SecB KUI_RS00715 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus KUI_RS00715 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus KUI_RS00720 PF00462 Glutaredoxin KUI_RS00730 PF00300 Histidine phosphatase superfamily (branch 1) KUI_RS00735 PF01551 Peptidase family M23 KUI_RS00740 PF13180 PDZ domain KUI_RS00740 PF03572 Peptidase family S41 KUI_RS00745 PF00899 ThiF family KUI_RS00750 PF03480 Bacterial extracellular solute-binding protein, family 7 KUI_RS00765 PF00119 ATP synthase A chain KUI_RS00770 PF00137 ATP synthase subunit C KUI_RS00775 PF00430 ATP synthase B/B' CF(0) KUI_RS00780 PF00213 ATP synthase delta (OSCP) subunit KUI_RS00785 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KUI_RS00785 PF02874 ATP synthase alpha/beta family, beta-barrel domain KUI_RS00785 PF00306 ATP synthase alpha/beta chain, C terminal domain KUI_RS00790 PF00231 ATP synthase KUI_RS00795 PF02874 ATP synthase alpha/beta family, beta-barrel domain KUI_RS00795 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KUI_RS00800 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain KUI_RS00820 PF00005 ABC transporter KUI_RS00835 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component KUI_RS00840 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component KUI_RS00845 PF03480 Bacterial extracellular solute-binding protein, family 7 KUI_RS00850 PF02492 CobW/HypB/UreG, nucleotide-binding domain KUI_RS00850 PF07683 Cobalamin synthesis protein cobW C-terminal domain KUI_RS00855 PF01475 Ferric uptake regulator family KUI_RS00860 PF00005 ABC transporter KUI_RS00865 PF00950 ABC 3 transport family KUI_RS00875 PF00589 Phage integrase family KUI_RS00875 PF02899 Phage integrase, N-terminal SAM-like domain KUI_RS00885 PF01678 Diaminopimelate epimerase KUI_RS00890 PF02934 GatB/GatE catalytic domain KUI_RS00890 PF02637 GatB domain KUI_RS00895 PF01425 Amidase KUI_RS00900 PF02686 Glu-tRNAGln amidotransferase C subunit KUI_RS00920 PF03717 Penicillin-binding Protein dimerisation domain KUI_RS00920 PF00905 Penicillin binding protein transpeptidase domain KUI_RS00925 PF01098 Cell cycle protein KUI_RS00930 PF18075 FtsX extracellular domain KUI_RS00935 PF00005 ABC transporter KUI_RS00940 PF00528 Binding-protein-dependent transport system inner membrane component KUI_RS00945 PF00528 Binding-protein-dependent transport system inner membrane component KUI_RS00950 PF00005 ABC transporter KUI_RS00965 PF02569 Pantoate-beta-alanine ligase KUI_RS00970 PF02616 Segregation and condensation protein ScpA KUI_RS00980 PF00072 Response regulator receiver domain KUI_RS00980 PF00196 Bacterial regulatory proteins, luxR family KUI_RS00990 PF01121 Dephospho-CoA kinase KUI_RS00995 PF07072 Cell division protein KUI_RS01000 PF00132 Bacterial transferase hexapeptide (six repeats) KUI_RS01005 PF00293 NUDIX domain KUI_RS01015 PF00348 Polyprenyl synthetase KUI_RS01020 PF00920 Dehydratase family KUI_RS01025 PF01018 GTP1/OBG KUI_RS01025 PF01926 50S ribosome-binding GTPase KUI_RS01040 PF07724 AAA domain (Cdc48 subfamily) KUI_RS01040 PF00004 ATPase family associated with various cellular activities (AAA) KUI_RS01040 PF10431 C-terminal, D2-small domain, of ClpB protein KUI_RS01045 PF00227 Proteasome subunit KUI_RS01055 PF01258 Prokaryotic dksA/traR C4-type zinc finger KUI_RS01065 PF01208 Uroporphyrinogen decarboxylase (URO-D) KUI_RS01070 PF00270 DEAD/DEAH box helicase KUI_RS01070 PF00271 Helicase conserved C-terminal domain KUI_RS01070 PF17764 3′ DNA-binding domain (3′BD) KUI_RS01070 PF18319 PriA DNA helicase Cys-rich region (CRR) domain KUI_RS01070 PF18074 Primosomal protein N C-terminal domain KUI_RS01075 PF01557 Fumarylacetoacetate (FAA) hydrolase family KUI_RS01080 PF16325 Peptidase family U32 C-terminal domain KUI_RS01080 PF01136 Peptidase family U32 KUI_RS01090 PF09827 CRISPR associated protein Cas2 KUI_RS01095 PF01867 CRISPR associated protein Cas1 KUI_RS01125 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KUI_RS01130 PF00528 Binding-protein-dependent transport system inner membrane component KUI_RS01135 PF12911 N-terminal TM domain of oligopeptide transport permease C KUI_RS01135 PF00528 Binding-protein-dependent transport system inner membrane component KUI_RS01140 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KUI_RS01140 PF00005 ABC transporter KUI_RS01145 PF00005 ABC transporter KUI_RS01145 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KUI_RS01160 PF01016 Ribosomal L27 protein KUI_RS01165 PF00829 Ribosomal prokaryotic L21 protein KUI_RS01175 PF00834 Ribulose-phosphate 3 epimerase family KUI_RS01180 PF03562 MltA specific insert domain KUI_RS01180 PF06725 3D domain KUI_RS01185 PF13098 Thioredoxin-like domain KUI_RS01185 PF10411 Disulfide bond isomerase protein N-terminus KUI_RS01195 PF04972 BON domain KUI_RS01200 PF13580 SIS domain KUI_RS01205 PF02021 Uncharacterised protein family UPF0102 KUI_RS01210 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KUI_RS01215 PF05036 Sporulation related domain KUI_RS01215 PF03330 Lytic transglycolase KUI_RS01220 PF03668 P-loop ATPase protein family KUI_RS01225 PF02603 HPr Serine kinase N terminus KUI_RS01225 PF07475 HPr Serine kinase C-terminal domain KUI_RS01230 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KUI_RS01235 PF00005 ABC transporter KUI_RS01255 PF01380 SIS domain KUI_RS01255 PF00571 CBS domain KUI_RS01260 PF00156 Phosphoribosyl transferase domain KUI_RS01265 PF00585 C-terminal regulatory domain of Threonine dehydratase KUI_RS01265 PF00291 Pyridoxal-phosphate dependent enzyme KUI_RS01270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KUI_RS01270 PF00989 PAS fold KUI_RS01270 PF11808 Phosphate regulon sensor protein PhoR KUI_RS01270 PF00512 His Kinase A (phospho-acceptor) domain KUI_RS01275 PF00072 Response regulator receiver domain KUI_RS01275 PF00486 Transcriptional regulatory protein, C terminal KUI_RS01280 PF01209 ubiE/COQ5 methyltransferase family KUI_RS01290 PF03109 ABC1 family KUI_RS01295 PF01467 Cytidylyltransferase-like KUI_RS01305 PF08543 Phosphomethylpyrimidine kinase KUI_RS01310 PF03976 Polyphosphate kinase 2 (PPK2) KUI_RS01315 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KUI_RS01315 PF07992 Pyridine nucleotide-disulphide oxidoreductase KUI_RS01325 PF06508 Queuosine biosynthesis protein QueC KUI_RS01330 PF01242 6-pyruvoyl tetrahydropterin synthase KUI_RS01335 PF04055 Radical SAM superfamily KUI_RS01360 PF01488 Shikimate / quinate 5-dehydrogenase KUI_RS01360 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain KUI_RS01360 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain KUI_RS01365 PF03462 PCRF domain KUI_RS01365 PF00472 RF-1 domain KUI_RS01370 PF13847 Methyltransferase domain KUI_RS01370 PF17827 PrmC N-terminal domain KUI_RS01375 PF00462 Glutaredoxin KUI_RS01380 PF02441 Flavoprotein KUI_RS01390 PF00939 Sodium:sulfate symporter transmembrane region KUI_RS01395 PF01266 FAD dependent oxidoreductase KUI_RS01425 PF00202 Aminotransferase class-III KUI_RS01425 PF06968 Biotin and Thiamin Synthesis associated domain KUI_RS01425 PF04055 Radical SAM superfamily KUI_RS01430 PF00155 Aminotransferase class I and II KUI_RS01435 PF04301 Protein of unknown function (DUF452) KUI_RS01440 PF08241 Methyltransferase domain KUI_RS01450 PF03009 Glycerophosphoryl diester phosphodiesterase family KUI_RS01455 PF08240 Alcohol dehydrogenase GroES-like domain KUI_RS01455 PF00107 Zinc-binding dehydrogenase KUI_RS01470 PF01169 Uncharacterized protein family UPF0016 KUI_RS01475 PF04575 Protein of unknown function (DUF560) KUI_RS01480 PF14489 QueF-like protein KUI_RS01480 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term KUI_RS01485 PF17483 C-lobe handle domain of Tf-binding protein B KUI_RS01485 PF01298 C-lobe and N-lobe beta barrels of Tf-binding protein B KUI_RS01485 PF17484 N-Lobe handle Tf-binding protein B KUI_RS01490 PF07715 TonB-dependent Receptor Plug Domain KUI_RS01490 PF00593 TonB dependent receptor KUI_RS01495 PF01171 PP-loop family KUI_RS01505 PF07992 Pyridine nucleotide-disulphide oxidoreductase KUI_RS01510 PF13396 Phospholipase_D-nuclease N-terminal KUI_RS01510 PF13091 PLD-like domain KUI_RS01515 PF00528 Binding-protein-dependent transport system inner membrane component KUI_RS01520 PF00528 Binding-protein-dependent transport system inner membrane component KUI_RS01525 PF00497 Bacterial extracellular solute-binding proteins, family 3 KUI_RS01535 PF04055 Radical SAM superfamily KUI_RS01535 PF06968 Biotin and Thiamin Synthesis associated domain KUI_RS01540 PF00582 Universal stress protein family KUI_RS01545 PF00929 Exonuclease KUI_RS01550 PF00929 Exonuclease KUI_RS01560 PF00551 Formyl transferase KUI_RS01585 PF01510 N-acetylmuramoyl-L-alanine amidase KUI_RS01595 PF01578 Cytochrome C assembly protein KUI_RS01600 PF02978 Signal peptide binding domain KUI_RS01600 PF00448 SRP54-type protein, GTPase domain KUI_RS01600 PF02881 SRP54-type protein, helical bundle domain KUI_RS01605 PF04972 BON domain KUI_RS01605 PF01476 LysM domain KUI_RS01610 PF02390 Putative methyltransferase KUI_RS01615 PF01588 Putative tRNA binding domain KUI_RS01615 PF09334 tRNA synthetases class I (M) KUI_RS01625 PF10609 NUBPL iron-transfer P-loop NTPase KUI_RS01640 PF00692 dUTPase KUI_RS01655 PF08669 Glycine cleavage T-protein C-terminal barrel domain KUI_RS01655 PF01571 Aminomethyltransferase folate-binding domain KUI_RS01660 PF01597 Glycine cleavage H-protein KUI_RS01665 PF02347 Glycine cleavage system P-protein KUI_RS01670 PF00303 Thymidylate synthase KUI_RS01675 PF00186 Dihydrofolate reductase KUI_RS01680 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KUI_RS01680 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KUI_RS01680 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KUI_RS01685 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KUI_RS01685 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KUI_RS01685 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KUI_RS01685 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KUI_RS01690 PF02913 FAD linked oxidases, C-terminal domain KUI_RS01690 PF01565 FAD binding domain KUI_RS01695 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) KUI_RS01695 PF13181 Tetratricopeptide repeat KUI_RS01700 PF03550 Outer membrane lipoprotein LolB KUI_RS01705 PF00288 GHMP kinases N terminal domain KUI_RS01705 PF08544 GHMP kinases C terminal KUI_RS01715 PF14572 Phosphoribosyl synthetase-associated domain KUI_RS01715 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase KUI_RS01720 PF14693 Ribosomal protein TL5, C-terminal domain KUI_RS01720 PF01386 Ribosomal L25p family KUI_RS01725 PF03895 YadA-like membrane anchor domain KUI_RS01725 PF13018 Extended Signal Peptide of Type V secretion system KUI_RS01725 PF05658 Head domain of trimeric autotransporter adhesin KUI_RS01725 PF05662 Coiled stalk of trimeric autotransporter adhesin KUI_RS01730 PF13018 Extended Signal Peptide of Type V secretion system KUI_RS01730 PF15401 Tryptophan-ring motif of head of Trimeric autotransporter adhesin KUI_RS01730 PF05662 Coiled stalk of trimeric autotransporter adhesin KUI_RS01730 PF03895 YadA-like membrane anchor domain KUI_RS01745 PF05662 Coiled stalk of trimeric autotransporter adhesin KUI_RS01745 PF13018 Extended Signal Peptide of Type V secretion system KUI_RS01745 PF03895 YadA-like membrane anchor domain KUI_RS01745 PF05658 Head domain of trimeric autotransporter adhesin KUI_RS01750 PF05658 Head domain of trimeric autotransporter adhesin KUI_RS01750 PF05662 Coiled stalk of trimeric autotransporter adhesin KUI_RS01750 PF03895 YadA-like membrane anchor domain KUI_RS01760 PF01195 Peptidyl-tRNA hydrolase KUI_RS01770 PF01926 50S ribosome-binding GTPase KUI_RS01770 PF06071 Protein of unknown function (DUF933) KUI_RS01775 PF00037 4Fe-4S binding domain KUI_RS01780 PF01467 Cytidylyltransferase-like KUI_RS01790 PF00448 SRP54-type protein, GTPase domain KUI_RS01790 PF02881 SRP54-type protein, helical bundle domain KUI_RS01805 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase KUI_RS01805 PF00925 GTP cyclohydrolase II KUI_RS01810 PF00885 6,7-dimethyl-8-ribityllumazine synthase KUI_RS01815 PF01029 NusB family KUI_RS01820 PF02769 AIR synthase related protein, C-terminal domain KUI_RS01820 PF00586 AIR synthase related protein, N-terminal domain KUI_RS01825 PF04608 Phosphatidylglycerophosphatase A KUI_RS01830 PF02464 Competence-damaged protein KUI_RS01835 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family KUI_RS01840 PF01219 Prokaryotic diacylglycerol kinase KUI_RS01845 PF00118 TCP-1/cpn60 chaperonin family KUI_RS01850 PF00166 Chaperonin 10 Kd subunit KUI_RS01855 PF00497 Bacterial extracellular solute-binding proteins, family 3 KUI_RS01870 PF00561 alpha/beta hydrolase fold KUI_RS01880 PF00691 OmpA family KUI_RS01885 PF07676 WD40-like Beta Propeller Repeat KUI_RS01885 PF04052 TolB amino-terminal domain KUI_RS01895 PF02472 Biopolymer transport protein ExbD/TolR KUI_RS01900 PF01618 MotA/TolQ/ExbB proton channel family KUI_RS01905 PF03061 Thioesterase superfamily KUI_RS01910 PF03129 Anticodon binding domain KUI_RS01910 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KUI_RS01910 PF04073 Aminoacyl-tRNA editing domain KUI_RS01915 PF00293 NUDIX domain KUI_RS01920 PF01926 50S ribosome-binding GTPase KUI_RS01920 PF10396 GTP-binding protein TrmE N-terminus KUI_RS01920 PF12631 MnmE helical domain KUI_RS01940 PF01790 Prolipoprotein diacylglyceryl transferase KUI_RS01945 PF00171 Aldehyde dehydrogenase family KUI_RS01945 PF01619 Proline dehydrogenase KUI_RS01945 PF14850 DNA-binding domain of Proline dehydrogenase KUI_RS01945 PF18327 Proline utilization A proline dehydrogenase N-terminal domain KUI_RS01950 PF00474 Sodium:solute symporter family KUI_RS01955 PF04072 Leucine carboxyl methyltransferase KUI_RS01995 PF03895 YadA-like membrane anchor domain KUI_RS01995 PF05662 Coiled stalk of trimeric autotransporter adhesin KUI_RS01995 PF05658 Head domain of trimeric autotransporter adhesin KUI_RS02000 PF00209 Sodium:neurotransmitter symporter family KUI_RS02005 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KUI_RS02005 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KUI_RS02010 PF00132 Bacterial transferase hexapeptide (six repeats) KUI_RS02020 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KUI_RS02025 PF01061 ABC-2 type transporter KUI_RS02030 PF14524 Wzt C-terminal domain KUI_RS02030 PF00005 ABC transporter KUI_RS02050 PF13537 Glutamine amidotransferase domain KUI_RS02050 PF00733 Asparagine synthase KUI_RS02060 PF02350 UDP-N-acetylglucosamine 2-epimerase KUI_RS02065 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KUI_RS02070 PF02397 Bacterial sugar transferase KUI_RS02085 PF01757 Acyltransferase family KUI_RS02090 PF02719 Polysaccharide biosynthesis protein KUI_RS02095 PF03971 Monomeric isocitrate dehydrogenase KUI_RS02105 PF01979 Amidohydrolase family KUI_RS02110 PF01596 O-methyltransferase KUI_RS02120 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KUI_RS02125 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KUI_RS02130 PF00528 Binding-protein-dependent transport system inner membrane component KUI_RS02135 PF12911 N-terminal TM domain of oligopeptide transport permease C KUI_RS02135 PF00528 Binding-protein-dependent transport system inner membrane component KUI_RS02140 PF00005 ABC transporter KUI_RS02140 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KUI_RS02145 PF00005 ABC transporter KUI_RS02145 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KUI_RS02150 PF00109 Beta-ketoacyl synthase, N-terminal domain KUI_RS02150 PF16197 Ketoacyl-synthetase C-terminal extension KUI_RS02150 PF08659 KR domain KUI_RS02150 PF14765 Polyketide synthase dehydratase KUI_RS02150 PF08240 Alcohol dehydrogenase GroES-like domain KUI_RS02150 PF00550 Phosphopantetheine attachment site KUI_RS02150 PF02801 Beta-ketoacyl synthase, C-terminal domain KUI_RS02150 PF00698 Acyl transferase domain KUI_RS02160 PF00121 Triosephosphate isomerase KUI_RS02165 PF03840 Preprotein translocase SecG subunit KUI_RS02185 PF00127 Copper binding proteins, plastocyanin/azurin family KUI_RS02190 PF13609 Gram-negative porin KUI_RS02195 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 KUI_RS02200 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit KUI_RS02205 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit KUI_RS02210 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit KUI_RS02220 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit KUI_RS02220 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region KUI_RS02220 PF10531 SLBB domain KUI_RS02225 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal KUI_RS02225 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region KUI_RS02225 PF00384 Molybdopterin oxidoreductase KUI_RS02230 PF00146 NADH dehydrogenase KUI_RS02235 PF12838 4Fe-4S dicluster domain KUI_RS02240 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 KUI_RS02245 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L KUI_RS02250 PF00361 Proton-conducting membrane transporter KUI_RS02250 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KUI_RS02255 PF00361 Proton-conducting membrane transporter KUI_RS02255 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus KUI_RS02260 PF00361 Proton-conducting membrane transporter KUI_RS02275 PF02559 CarD-like/TRCF domain KUI_RS02275 PF03461 TRCF domain KUI_RS02275 PF00271 Helicase conserved C-terminal domain KUI_RS02275 PF17757 UvrB interaction domain KUI_RS02275 PF00270 DEAD/DEAH box helicase KUI_RS02280 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase KUI_RS02280 PF02542 YgbB family KUI_RS02285 PF02627 Carboxymuconolactone decarboxylase family KUI_RS02290 PF00578 AhpC/TSA family KUI_RS02295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KUI_RS02295 PF00672 HAMP domain KUI_RS02295 PF00512 His Kinase A (phospho-acceptor) domain KUI_RS02300 PF00072 Response regulator receiver domain KUI_RS02300 PF00486 Transcriptional regulatory protein, C terminal KUI_RS02305 PF00814 Glycoprotease family KUI_RS02315 PF07690 Major Facilitator Superfamily KUI_RS02320 PF06470 SMC proteins Flexible Hinge Domain KUI_RS02320 PF02463 RecF/RecN/SMC N terminal domain KUI_RS02330 PF03119 NAD-dependent DNA ligase C4 zinc finger domain KUI_RS02330 PF00533 BRCA1 C Terminus (BRCT) domain KUI_RS02330 PF03120 NAD-dependent DNA ligase OB-fold domain KUI_RS02330 PF01653 NAD-dependent DNA ligase adenylation domain KUI_RS02330 PF12826 Helix-hairpin-helix motif KUI_RS02345 PF04279 Intracellular septation protein A KUI_RS02370 PF00005 ABC transporter KUI_RS02370 PF12399 Branched-chain amino acid ATP-binding cassette transporter KUI_RS02375 PF00005 ABC transporter KUI_RS02380 PF00633 Helix-hairpin-helix motif KUI_RS02380 PF10576 Iron-sulfur binding domain of endonuclease III KUI_RS02380 PF00730 HhH-GPD superfamily base excision DNA repair protein KUI_RS02385 PF04060 Putative Fe-S cluster KUI_RS02390 PF00970 Oxidoreductase FAD-binding domain KUI_RS02390 PF00175 Oxidoreductase NAD-binding domain KUI_RS02395 PF11953 Domain of unknown function (DUF3470) KUI_RS02395 PF00037 4Fe-4S binding domain KUI_RS02400 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain KUI_RS02400 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family KUI_RS02405 PF13291 ACT domain KUI_RS02405 PF02824 TGS domain KUI_RS02405 PF04607 Region found in RelA / SpoT proteins KUI_RS02410 PF17848 Acetyl-coA carboxylase zinc finger domain KUI_RS02410 PF01039 Carboxyl transferase domain KUI_RS02415 PF00575 S1 RNA binding domain KUI_RS02415 PF12111 Polyribonucleotide phosphorylase C terminal KUI_RS02415 PF10150 Ribonuclease E/G family KUI_RS02420 PF01479 S4 domain KUI_RS02420 PF00849 RNA pseudouridylate synthase KUI_RS02425 PF13419 Haloacid dehalogenase-like hydrolase KUI_RS02430 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KUI_RS02435 PF02545 Maf-like protein KUI_RS02445 PF01783 Ribosomal L32p protein family KUI_RS02450 PF02504 Fatty acid synthesis protein KUI_RS02455 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KUI_RS02455 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KUI_RS02460 PF00698 Acyl transferase domain KUI_RS02470 PF00550 Phosphopantetheine attachment site KUI_RS02475 PF02801 Beta-ketoacyl synthase, C-terminal domain KUI_RS02475 PF00109 Beta-ketoacyl synthase, N-terminal domain KUI_RS02485 PF13180 PDZ domain KUI_RS02490 PF03144 Elongation factor Tu domain 2 KUI_RS02490 PF00679 Elongation factor G C-terminus KUI_RS02490 PF06421 GTP-binding protein LepA C-terminus KUI_RS02490 PF00009 Elongation factor Tu GTP binding domain KUI_RS02495 PF10502 Signal peptidase, peptidase S26 KUI_RS02505 PF01926 50S ribosome-binding GTPase KUI_RS02505 PF07650 KH domain KUI_RS02510 PF02565 Recombination protein O C terminal KUI_RS02510 PF11967 Recombination protein O N terminal KUI_RS02515 PF01027 Inhibitor of apoptosis-promoting Bax1 KUI_RS02525 PF02789 Cytosol aminopeptidase family, N-terminal domain KUI_RS02525 PF00883 Cytosol aminopeptidase family, catalytic domain KUI_RS02535 PF03466 LysR substrate binding domain KUI_RS02535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KUI_RS02540 PF00440 Bacterial regulatory proteins, tetR family KUI_RS02540 PF13977 BetI-type transcriptional repressor, C-terminal KUI_RS02555 PF00877 NlpC/P60 family KUI_RS02565 PF01321 Creatinase/Prolidase N-terminal domain KUI_RS02565 PF00557 Metallopeptidase family M24 KUI_RS02575 PF00471 Ribosomal protein L33 KUI_RS02580 PF00830 Ribosomal L28 family KUI_RS02585 PF01554 MatE KUI_RS02595 PF01197 Ribosomal protein L31 KUI_RS02600 PF04002 RadC-like JAB domain KUI_RS02605 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KUI_RS02610 PF02401 LytB protein KUI_RS02615 PF02545 Maf-like protein KUI_RS02620 PF02590 Predicted SPOUT methyltransferase KUI_RS02630 PF01467 Cytidylyltransferase-like KUI_RS02635 PF02843 Phosphoribosylglycinamide synthetase, C domain KUI_RS02635 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KUI_RS02635 PF02844 Phosphoribosylglycinamide synthetase, N domain KUI_RS02640 PF01709 Transcriptional regulator KUI_RS02645 PF05872 Bacterial protein of unknown function (DUF853) KUI_RS02650 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain KUI_RS02655 PF17432 Domain of unknown function (DUF3458_C) ARM repeats KUI_RS02655 PF01433 Peptidase family M1 domain KUI_RS02655 PF11940 Domain of unknown function (DUF3458) Ig-like fold KUI_RS02660 PF01523 Putative modulator of DNA gyrase KUI_RS02670 PF00206 Lyase KUI_RS02670 PF08328 Adenylosuccinate lyase C-terminal KUI_RS02675 PF01322 Cytochrome C' KUI_RS02695 PF01645 Conserved region in glutamate synthase KUI_RS02705 PF00545 ribonuclease KUI_RS02720 PF12848 ABC transporter KUI_RS02720 PF00005 ABC transporter KUI_RS02720 PF16326 ABC transporter C-terminal domain KUI_RS02725 PF13406 Transglycosylase SLT domain KUI_RS02730 PF17804 Tail specific protease N-terminal domain KUI_RS02730 PF03572 Peptidase family S41 KUI_RS02730 PF00595 PDZ domain KUI_RS02730 PF11818 C-terminal domain of tail specific protease (DUF3340) KUI_RS02735 PF04321 RmlD substrate binding domain KUI_RS02740 PF13419 Haloacid dehalogenase-like hydrolase KUI_RS02750 PF00691 OmpA family KUI_RS02755 PF03989 DNA gyrase C-terminal domain, beta-propeller KUI_RS02755 PF00521 DNA gyrase/topoisomerase IV, subunit A KUI_RS02760 PF00266 Aminotransferase class-V KUI_RS02765 PF00800 Prephenate dehydratase KUI_RS02765 PF01842 ACT domain KUI_RS02765 PF01817 Chorismate mutase type II KUI_RS02770 PF01842 ACT domain KUI_RS02770 PF02153 Prephenate dehydrogenase KUI_RS02775 PF02224 Cytidylate kinase KUI_RS02780 PF00575 S1 RNA binding domain KUI_RS02785 PF00216 Bacterial DNA-binding protein KUI_RS02795 PF18073 Rubredoxin metal binding domain KUI_RS02800 PF00294 pfkB family carbohydrate kinase KUI_RS02805 PF10531 SLBB domain KUI_RS02810 PF00403 Heavy-metal-associated domain KUI_RS02820 PF00115 Cytochrome C and Quinol oxidase polypeptide I KUI_RS02835 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP KUI_RS02835 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KUI_RS02840 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase KUI_RS02840 PF12801 4Fe-4S binding domain KUI_RS02840 PF13746 4Fe-4S dicluster domain KUI_RS02850 PF00027 Cyclic nucleotide-binding domain KUI_RS02850 PF13545 Crp-like helix-turn-helix domain KUI_RS02860 PF01430 Hsp33 protein KUI_RS02870 PF13193 AMP-binding enzyme C-terminal domain KUI_RS02870 PF16177 Acetyl-coenzyme A synthetase N-terminus KUI_RS02870 PF00501 AMP-binding enzyme KUI_RS02880 PF01170 Putative RNA methylase family UPF0020 KUI_RS02880 PF02926 THUMP domain KUI_RS02885 PF03653 Uncharacterised protein family (UPF0093) KUI_RS02900 PF00133 tRNA synthetases class I (I, L, M and V) KUI_RS02900 PF13603 Leucyl-tRNA synthetase, Domain 2 KUI_RS02900 PF09334 tRNA synthetases class I (M) KUI_RS02900 PF08264 Anticodon-binding domain of tRNA KUI_RS02905 PF07687 Peptidase dimerisation domain KUI_RS02905 PF01546 Peptidase family M20/M25/M40 KUI_RS02910 PF08007 Cupin superfamily protein KUI_RS02915 PF05192 MutS domain III KUI_RS02915 PF01624 MutS domain I KUI_RS02915 PF05190 MutS family domain IV KUI_RS02915 PF05188 MutS domain II KUI_RS02915 PF00488 MutS domain V KUI_RS02920 PF00924 Mechanosensitive ion channel KUI_RS02920 PF05552 Conserved TM helix KUI_RS02925 PF00588 SpoU rRNA Methylase family KUI_RS02930 PF00459 Inositol monophosphatase family KUI_RS02935 PF02673 Bacitracin resistance protein BacA KUI_RS02940 PF00149 Calcineurin-like phosphoesterase KUI_RS02945 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD KUI_RS02955 PF09190 DALR domain KUI_RS02955 PF01406 tRNA synthetases class I (C) catalytic domain KUI_RS02960 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit KUI_RS02965 PF01171 PP-loop family KUI_RS02965 PF09179 TilS substrate binding domain KUI_RS02980 PF16868 NMT1-like family KUI_RS03000 PF00005 ABC transporter KUI_RS03000 PF06472 ABC transporter transmembrane region 2 KUI_RS03005 PF00593 TonB dependent receptor KUI_RS03005 PF07715 TonB-dependent Receptor Plug Domain KUI_RS03010 PF01842 ACT domain KUI_RS03010 PF00696 Amino acid kinase family KUI_RS03010 PF13840 ACT domain KUI_RS03020 PF04461 Protein of unknown function (DUF520) KUI_RS03025 PF08207 Elongation factor P (EF-P) KOW-like domain KUI_RS03025 PF01132 Elongation factor P (EF-P) OB domain KUI_RS03025 PF09285 Elongation factor P, C-terminal KUI_RS03035 PF00155 Aminotransferase class I and II KUI_RS03040 PF00330 Aconitase family (aconitate hydratase) KUI_RS03040 PF06434 Aconitate hydratase 2 N-terminus KUI_RS03040 PF11791 Aconitate B N-terminal domain KUI_RS03055 PF00579 tRNA synthetases class I (W and Y) KUI_RS03060 PF01427 D-ala-D-ala dipeptidase KUI_RS03065 PF01569 PAP2 superfamily KUI_RS03075 PF13667 ThiC-associated domain KUI_RS03075 PF01964 Radical SAM ThiC family KUI_RS03085 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KUI_RS03085 PF07498 Rho termination factor, N-terminal domain KUI_RS03085 PF07497 Rho termination factor, RNA-binding domain KUI_RS03090 PF00085 Thioredoxin KUI_RS03095 PF00204 DNA gyrase B KUI_RS03095 PF01751 Toprim domain KUI_RS03095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KUI_RS03095 PF00986 DNA gyrase B subunit, carboxyl terminus KUI_RS03100 PF00521 DNA gyrase/topoisomerase IV, subunit A KUI_RS03105 PF00970 Oxidoreductase FAD-binding domain KUI_RS03105 PF00111 2Fe-2S iron-sulfur cluster binding domain KUI_RS03105 PF00175 Oxidoreductase NAD-binding domain KUI_RS03115 PF01411 tRNA synthetases class II (A) KUI_RS03115 PF02272 DHHA1 domain KUI_RS03115 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KUI_RS03120 PF01206 Sulfurtransferase TusA KUI_RS03125 PF00886 Ribosomal protein S16 KUI_RS03130 PF01782 RimM N-terminal domain KUI_RS03135 PF01746 tRNA (Guanine-1)-methyltransferase KUI_RS03140 PF01451 Low molecular weight phosphotyrosine protein phosphatase KUI_RS03145 PF02082 Transcriptional regulator KUI_RS03150 PF00266 Aminotransferase class-V KUI_RS03155 PF01592 NifU-like N terminal domain KUI_RS03160 PF01521 Iron-sulphur cluster biosynthesis KUI_RS03165 PF07743 HSCB C-terminal oligomerisation domain KUI_RS03170 PF00012 Hsp70 protein KUI_RS03175 PF00111 2Fe-2S iron-sulfur cluster binding domain KUI_RS03205 PF00152 tRNA synthetases class II (D, K and N) KUI_RS03205 PF01336 OB-fold nucleic acid binding domain KUI_RS03210 PF03462 PCRF domain KUI_RS03210 PF00472 RF-1 domain KUI_RS03215 PF01368 DHH family KUI_RS03215 PF02272 DHHA1 domain KUI_RS03215 PF17768 RecJ OB domain KUI_RS03225 PF12704 MacB-like periplasmic core domain KUI_RS03225 PF02687 FtsX-like permease family KUI_RS03230 PF00005 ABC transporter KUI_RS03235 PF01494 FAD binding domain KUI_RS03240 PF01026 TatD related DNase KUI_RS03245 PF03772 Competence protein KUI_RS03245 PF00753 Metallo-beta-lactamase superfamily KUI_RS03250 PF02811 PHP domain KUI_RS03255 PF03449 Transcription elongation factor, N-terminal KUI_RS03255 PF01272 Transcription elongation factor, GreA/GreB, C-term KUI_RS03260 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ KUI_RS03265 PF13145 PPIC-type PPIASE domain KUI_RS03270 PF01632 Ribosomal protein L35 KUI_RS03275 PF00453 Ribosomal protein L20 KUI_RS03280 PF01409 tRNA synthetases class II core domain (F) KUI_RS03280 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain KUI_RS03285 PF01588 Putative tRNA binding domain KUI_RS03285 PF03147 Ferredoxin-fold anticodon binding domain KUI_RS03285 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain KUI_RS03285 PF03483 B3/4 domain KUI_RS03285 PF03484 tRNA synthetase B5 domain KUI_RS03290 PF00216 Bacterial DNA-binding protein KUI_RS03300 PF01177 Asp/Glu/Hydantoin racemase KUI_RS03305 PF01070 FMN-dependent dehydrogenase KUI_RS03310 PF00291 Pyridoxal-phosphate dependent enzyme KUI_RS03320 PF00580 UvrD/REP helicase N-terminal domain KUI_RS03320 PF12462 DNA helicase IV / RNA helicase N terminal KUI_RS03320 PF13361 UvrD-like helicase C-terminal domain KUI_RS03325 PF09424 Yqey-like protein KUI_RS03335 PF00768 D-alanyl-D-alanine carboxypeptidase KUI_RS03340 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal KUI_RS03340 PF02769 AIR synthase related protein, C-terminal domain KUI_RS03340 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain KUI_RS03345 PF00571 CBS domain KUI_RS03345 PF00478 IMP dehydrogenase / GMP reductase domain KUI_RS03355 PF00117 Glutamine amidotransferase class-I KUI_RS03355 PF00958 GMP synthase C terminal domain KUI_RS03355 PF02540 NAD synthase KUI_RS03390 PF00474 Sodium:solute symporter family KUI_RS03400 PF03806 AbgT putative transporter family KUI_RS03405 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KUI_RS03415 PF07690 Major Facilitator Superfamily KUI_RS03425 PF12857 TOBE-like domain KUI_RS03425 PF00005 ABC transporter KUI_RS03450 PF04575 Protein of unknown function (DUF560) KUI_RS03455 PF00664 ABC transporter transmembrane region KUI_RS03455 PF00005 ABC transporter KUI_RS03460 PF00664 ABC transporter transmembrane region KUI_RS03460 PF00005 ABC transporter KUI_RS03465 PF03616 Sodium/glutamate symporter KUI_RS03480 PF00390 Malic enzyme, N-terminal domain KUI_RS03480 PF03949 Malic enzyme, NAD binding domain KUI_RS03480 PF01515 Phosphate acetyl/butaryl transferase KUI_RS03485 PF00676 Dehydrogenase E1 component KUI_RS03485 PF16078 2-oxoglutarate dehydrogenase N-terminus KUI_RS03485 PF16870 2-oxoglutarate dehydrogenase C-terminal KUI_RS03485 PF02779 Transketolase, pyrimidine binding domain KUI_RS03490 PF00364 Biotin-requiring enzyme KUI_RS03490 PF02817 e3 binding domain KUI_RS03490 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KUI_RS03495 PF07992 Pyridine nucleotide-disulphide oxidoreductase KUI_RS03495 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KUI_RS03500 PF03969 AFG1-like ATPase KUI_RS03505 PF01078 Magnesium chelatase, subunit ChlI KUI_RS03505 PF13335 Magnesium chelatase, subunit ChlI C-terminal KUI_RS03510 PF03180 NLPA lipoprotein KUI_RS03520 PF13291 ACT domain KUI_RS03520 PF02824 TGS domain KUI_RS03520 PF04607 Region found in RelA / SpoT proteins KUI_RS03525 PF01192 RNA polymerase Rpb6 KUI_RS03530 PF00625 Guanylate kinase KUI_RS03535 PF02562 PhoH-like protein KUI_RS03535 PF13638 PIN domain KUI_RS03540 PF00578 AhpC/TSA family KUI_RS03545 PF04430 Protein of unknown function (DUF498/DUF598) KUI_RS03550 PF03447 Homoserine dehydrogenase, NAD binding domain KUI_RS03550 PF01842 ACT domain KUI_RS03550 PF00742 Homoserine dehydrogenase KUI_RS03555 PF14821 Threonine synthase N terminus KUI_RS03555 PF00291 Pyridoxal-phosphate dependent enzyme KUI_RS03565 PF00842 Alanine racemase, C-terminal domain KUI_RS03565 PF01168 Alanine racemase, N-terminal domain KUI_RS03570 PF18073 Rubredoxin metal binding domain KUI_RS03575 PF13416 Bacterial extracellular solute-binding protein KUI_RS03580 PF08402 TOBE domain KUI_RS03580 PF00005 ABC transporter KUI_RS03585 PF00528 Binding-protein-dependent transport system inner membrane component KUI_RS03590 PF00528 Binding-protein-dependent transport system inner membrane component KUI_RS03595 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) KUI_RS03600 PF01895 PhoU domain KUI_RS03605 PF04362 Bacterial Fe(2+) trafficking KUI_RS03610 PF11898 Domain of unknown function (DUF3418) KUI_RS03610 PF00271 Helicase conserved C-terminal domain KUI_RS03610 PF04408 Helicase associated domain (HA2) KUI_RS03610 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold KUI_RS03610 PF00270 DEAD/DEAH box helicase KUI_RS03615 PF14579 Helix-hairpin-helix motif KUI_RS03615 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KUI_RS03615 PF07733 Bacterial DNA polymerase III alpha NTPase domain KUI_RS03615 PF02811 PHP domain KUI_RS03615 PF01336 OB-fold nucleic acid binding domain KUI_RS03625 PF00664 ABC transporter transmembrane region KUI_RS03625 PF00005 ABC transporter KUI_RS03630 PF10150 Ribonuclease E/G family KUI_RS03630 PF00575 S1 RNA binding domain KUI_RS03635 PF01227 GTP cyclohydrolase I KUI_RS03665 PF00565 Staphylococcal nuclease homologue KUI_RS03670 PF00881 Nitroreductase family KUI_RS03675 PF03544 Gram-negative bacterial TonB protein C-terminal KUI_RS03680 PF01618 MotA/TolQ/ExbB proton channel family KUI_RS03685 PF02472 Biopolymer transport protein ExbD/TolR KUI_RS03695 PF04305 Protein of unknown function (DUF455) KUI_RS03700 PF06472 ABC transporter transmembrane region 2 KUI_RS03700 PF00005 ABC transporter KUI_RS03705 PF13673 Acetyltransferase (GNAT) domain KUI_RS03715 PF01925 Sulfite exporter TauE/SafE KUI_RS03720 PF00575 S1 RNA binding domain KUI_RS03720 PF08206 Ribonuclease B OB domain KUI_RS03720 PF17876 Cold shock domain KUI_RS03720 PF08461 Ribonuclease R winged-helix domain KUI_RS03720 PF00773 RNB domain KUI_RS03725 PF08032 RNA 2'-O ribose methyltransferase substrate binding KUI_RS03725 PF00588 SpoU rRNA Methylase family KUI_RS03730 PF01053 Cys/Met metabolism PLP-dependent enzyme KUI_RS03735 PF00216 Bacterial DNA-binding protein KUI_RS03740 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KUI_RS03745 PF00005 ABC transporter KUI_RS03755 PF02321 Outer membrane efflux protein KUI_RS03765 PF00764 Arginosuccinate synthase KUI_RS03770 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KUI_RS03770 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KUI_RS03780 PF01649 Ribosomal protein S20 KUI_RS03785 PF03023 Lipid II flippase MurJ KUI_RS03790 PF05191 Adenylate kinase, active site lid KUI_RS03795 PF02348 Cytidylyltransferase KUI_RS03800 PF02606 Tetraacyldisaccharide-1-P 4'-kinase KUI_RS03805 PF02601 Exonuclease VII, large subunit KUI_RS03805 PF13742 OB-fold nucleic acid binding domain KUI_RS03810 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KUI_RS03810 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KUI_RS03815 PF13458 Periplasmic binding protein KUI_RS03820 PF14748 Pyrroline-5-carboxylate reductase dimerisation KUI_RS03820 PF03807 NADP oxidoreductase coenzyme F420-dependent KUI_RS03825 PF02653 Branched-chain amino acid transport system / permease component KUI_RS03830 PF02653 Branched-chain amino acid transport system / permease component KUI_RS03830 PF11862 Domain of unknown function (DUF3382) KUI_RS03835 PF00005 ABC transporter KUI_RS03835 PF12399 Branched-chain amino acid ATP-binding cassette transporter KUI_RS03840 PF00005 ABC transporter KUI_RS03845 PF02630 SCO1/SenC KUI_RS03850 PF01432 Peptidase family M3 KUI_RS03855 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain KUI_RS03855 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain KUI_RS03860 PF00196 Bacterial regulatory proteins, luxR family KUI_RS03860 PF00072 Response regulator receiver domain KUI_RS03865 PF00512 His Kinase A (phospho-acceptor) domain KUI_RS03865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KUI_RS03865 PF00989 PAS fold KUI_RS03870 PF17831 Pyruvate dehydrogenase E1 component middle domain KUI_RS03870 PF00456 Transketolase, thiamine diphosphate binding domain KUI_RS03875 PF02817 e3 binding domain KUI_RS03875 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KUI_RS03875 PF00364 Biotin-requiring enzyme KUI_RS03880 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KUI_RS03880 PF07992 Pyridine nucleotide-disulphide oxidoreductase KUI_RS03885 PF01292 Prokaryotic cytochrome b561 KUI_RS03890 PF02875 Mur ligase family, glutamate ligase domain KUI_RS03890 PF08245 Mur ligase middle domain KUI_RS03900 PF02674 Colicin V production protein KUI_RS03905 PF00156 Phosphoribosyl transferase domain KUI_RS03910 PF02423 Ornithine cyclodeaminase/mu-crystallin family KUI_RS03920 PF01914 MarC family integral membrane protein KUI_RS03925 PF01966 HD domain KUI_RS03925 PF01909 Nucleotidyltransferase domain KUI_RS03925 PF08335 GlnD PII-uridylyltransferase KUI_RS03930 PF00557 Metallopeptidase family M24 KUI_RS03935 PF00318 Ribosomal protein S2 KUI_RS03940 PF00889 Elongation factor TS KUI_RS03945 PF00696 Amino acid kinase family KUI_RS03950 PF01765 Ribosome recycling factor KUI_RS03955 PF01255 Putative undecaprenyl diphosphate synthase KUI_RS03965 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase KUI_RS03965 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain KUI_RS03965 PF13288 DXP reductoisomerase C-terminal domain KUI_RS03970 PF02163 Peptidase family M50 KUI_RS03970 PF17820 PDZ domain KUI_RS03975 PF01103 Surface antigen KUI_RS03975 PF07244 Surface antigen variable number repeat KUI_RS03980 PF03938 Outer membrane protein (OmpH-like) KUI_RS03985 PF14602 Hexapeptide repeat of succinyl-transferase KUI_RS03985 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD KUI_RS03985 PF00132 Bacterial transferase hexapeptide (six repeats) KUI_RS03990 PF07977 FabA-like domain KUI_RS03995 PF00132 Bacterial transferase hexapeptide (six repeats) KUI_RS03995 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 KUI_RS04000 PF02684 Lipid-A-disaccharide synthetase KUI_RS04005 PF01351 Ribonuclease HII KUI_RS04015 PF00588 SpoU rRNA Methylase family KUI_RS04015 PF08032 RNA 2'-O ribose methyltransferase substrate binding KUI_RS04020 PF03618 Kinase/pyrophosphorylase KUI_RS04025 PF00391 PEP-utilising enzyme, mobile domain KUI_RS04025 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain KUI_RS04025 PF02896 PEP-utilising enzyme, TIM barrel domain KUI_RS04035 PF01145 SPFH domain / Band 7 family KUI_RS04040 PF01668 SmpB protein KUI_RS04045 PF03364 Polyketide cyclase / dehydrase and lipid transport KUI_RS04050 PF03658 RnfH family Ubiquitin KUI_RS04055 PF01571 Aminomethyltransferase folate-binding domain KUI_RS04060 PF02618 YceG-like family KUI_RS04065 PF02223 Thymidylate kinase KUI_RS04070 PF09115 DNA polymerase III, delta subunit, C terminal KUI_RS04075 PF01026 TatD related DNase KUI_RS04085 PF03334 Na+/H+ antiporter subunit KUI_RS04090 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) KUI_RS04095 PF01899 Na+/H+ ion antiporter subunit KUI_RS04100 PF00361 Proton-conducting membrane transporter KUI_RS04105 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L KUI_RS04110 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KUI_RS04110 PF00361 Proton-conducting membrane transporter KUI_RS04110 PF13244 Domain of unknown function (DUF4040) KUI_RS04110 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter KUI_RS04120 PF00529 HlyD membrane-fusion protein of T1SS KUI_RS04120 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KUI_RS04125 PF00873 AcrB/AcrD/AcrF family KUI_RS04130 PF02321 Outer membrane efflux protein KUI_RS04135 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ KUI_RS04140 PF00881 Nitroreductase family KUI_RS04145 PF00171 Aldehyde dehydrogenase family KUI_RS04155 PF00873 AcrB/AcrD/AcrF family KUI_RS04160 PF00873 AcrB/AcrD/AcrF family KUI_RS04165 PF13533 Biotin-lipoyl like KUI_RS04170 PF00892 EamA-like transporter family KUI_RS04180 PF03401 Tripartite tricarboxylate transporter family receptor KUI_RS04190 PF03372 Endonuclease/Exonuclease/phosphatase family KUI_RS04200 PF01479 S4 domain KUI_RS04200 PF00849 RNA pseudouridylate synthase KUI_RS04205 PF00543 Nitrogen regulatory protein P-II KUI_RS04210 PF00795 Carbon-nitrogen hydrolase KUI_RS04210 PF02540 NAD synthase KUI_RS04215 PF14698 Argininosuccinate lyase C-terminal KUI_RS04215 PF00206 Lyase KUI_RS04220 PF01075 Glycosyltransferase family 9 (heptosyltransferase) KUI_RS04225 PF02631 RecX family KUI_RS04230 PF00154 recA bacterial DNA recombination protein KUI_RS04235 PF04381 Putative exonuclease, RdgC KUI_RS04245 PF02151 UvrB/uvrC motif KUI_RS04245 PF04851 Type III restriction enzyme, res subunit KUI_RS04245 PF12344 Ultra-violet resistance protein B KUI_RS04245 PF17757 UvrB interaction domain KUI_RS04245 PF00271 Helicase conserved C-terminal domain KUI_RS04250 PF00155 Aminotransferase class I and II KUI_RS04255 PF01726 LexA DNA binding domain KUI_RS04255 PF00717 Peptidase S24-like KUI_RS04265 PF16868 NMT1-like family KUI_RS04275 PF01594 AI-2E family transporter KUI_RS04300 PF00132 Bacterial transferase hexapeptide (six repeats) KUI_RS04300 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal KUI_RS04300 PF14602 Hexapeptide repeat of succinyl-transferase KUI_RS04305 PF01546 Peptidase family M20/M25/M40 KUI_RS04305 PF07687 Peptidase dimerisation domain KUI_RS04310 PF05175 Methyltransferase small domain KUI_RS04315 PF00005 ABC transporter KUI_RS04315 PF12848 ABC transporter KUI_RS04320 PF00005 ABC transporter KUI_RS04325 PF02653 Branched-chain amino acid transport system / permease component KUI_RS04335 PF01416 tRNA pseudouridine synthase KUI_RS04340 PF01118 Semialdehyde dehydrogenase, NAD binding domain KUI_RS04340 PF02774 Semialdehyde dehydrogenase, dimerisation domain KUI_RS04345 PF00180 Isocitrate/isopropylmalate dehydrogenase KUI_RS04350 PF00694 Aconitase C-terminal domain KUI_RS04355 PF00330 Aconitase family (aconitate hydratase) KUI_RS04365 PF03631 Virulence factor BrkB KUI_RS04370 PF00268 Ribonucleotide reductase, small chain KUI_RS04375 PF02867 Ribonucleotide reductase, barrel domain KUI_RS04375 PF03477 ATP cone domain KUI_RS04375 PF00317 Ribonucleotide reductase, all-alpha domain KUI_RS04380 PF01207 Dihydrouridine synthase (Dus) KUI_RS04385 PF00654 Voltage gated chloride channel KUI_RS04390 PF01636 Phosphotransferase enzyme family KUI_RS04400 PF00766 Electron transfer flavoprotein FAD-binding domain KUI_RS04400 PF01012 Electron transfer flavoprotein domain KUI_RS04405 PF01012 Electron transfer flavoprotein domain KUI_RS04410 PF01066 CDP-alcohol phosphatidyltransferase KUI_RS04415 PF08459 UvrC Helix-hairpin-helix N-terminal KUI_RS04415 PF01541 GIY-YIG catalytic domain KUI_RS04415 PF02151 UvrB/uvrC motif KUI_RS04420 PF00933 Glycosyl hydrolase family 3 N terminal domain KUI_RS04425 PF01648 4'-phosphopantetheinyl transferase superfamily KUI_RS04430 PF00929 Exonuclease KUI_RS04435 PF03193 RsgA GTPase KUI_RS04440 PF01245 Ribosomal protein L19 KUI_RS04465 PF00437 Type II/IV secretion system protein KUI_RS04470 PF13629 Pilus formation protein N terminal region KUI_RS04470 PF04972 BON domain KUI_RS04470 PF00263 Bacterial type II and III secretion system protein KUI_RS04500 PF03167 Uracil DNA glycosylase superfamily KUI_RS04515 PF00140 Sigma-70 factor, region 1.2 KUI_RS04515 PF04542 Sigma-70 region 2 KUI_RS04515 PF04546 Sigma-70, non-essential region KUI_RS04515 PF04539 Sigma-70 region 3 KUI_RS04515 PF03979 Sigma-70 factor, region 1.1 KUI_RS04515 PF04545 Sigma-70, region 4 KUI_RS04520 PF10410 DnaB-helicase binding domain of primase KUI_RS04520 PF08278 DNA primase DnaG DnaB-binding KUI_RS04520 PF08275 DNA primase catalytic core, N-terminal domain KUI_RS04520 PF01807 CHC2 zinc finger KUI_RS04525 PF01165 Ribosomal protein S21 KUI_RS04530 PF00156 Phosphoribosyl transferase domain KUI_RS04535 PF00709 Adenylosuccinate synthetase KUI_RS04540 PF01145 SPFH domain / Band 7 family KUI_RS04545 PF01145 SPFH domain / Band 7 family KUI_RS04550 PF16360 GTP-binding GTPase Middle Region KUI_RS04550 PF01926 50S ribosome-binding GTPase KUI_RS04550 PF13167 GTP-binding GTPase N-terminal KUI_RS04555 PF17209 Hfq protein KUI_RS04560 PF01926 50S ribosome-binding GTPase KUI_RS04560 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal KUI_RS04565 PF13360 PQQ-like domain KUI_RS04570 PF09976 Tetratricopeptide repeat-like domain KUI_RS04575 PF13393 Histidyl-tRNA synthetase KUI_RS04575 PF03129 Anticodon binding domain KUI_RS04580 PF04551 GcpE protein KUI_RS04590 PF04055 Radical SAM superfamily KUI_RS04595 PF00334 Nucleoside diphosphate kinase KUI_RS04600 PF00133 tRNA synthetases class I (I, L, M and V) KUI_RS04600 PF08264 Anticodon-binding domain of tRNA KUI_RS04600 PF10458 Valyl tRNA synthetase tRNA binding arm KUI_RS04610 PF00719 Inorganic pyrophosphatase KUI_RS04630 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain KUI_RS04630 PF03900 Porphobilinogen deaminase, C-terminal domain KUI_RS04635 PF03741 Integral membrane protein TerC family KUI_RS04640 PF00549 CoA-ligase KUI_RS04640 PF02629 CoA binding domain KUI_RS04645 PF08442 ATP-grasp domain KUI_RS04645 PF00549 CoA-ligase KUI_RS04665 PF05958 tRNA (Uracil-5-)-methyltransferase KUI_RS04675 PF01476 LysM domain KUI_RS04675 PF01551 Peptidase family M23 KUI_RS04685 PF01975 Survival protein SurE KUI_RS04690 PF02660 Glycerol-3-phosphate acyltransferase KUI_RS04695 PF00814 Glycoprotease family KUI_RS04700 PF00860 Permease family KUI_RS04705 PF01205 Uncharacterized protein family UPF0029 KUI_RS04710 PF00005 ABC transporter KUI_RS04710 PF12848 ABC transporter KUI_RS04715 PF17676 LD-carboxypeptidase C-terminal domain KUI_RS04715 PF02016 LD-carboxypeptidase N-terminal domain KUI_RS04720 PF14437 MafB19-like deaminase KUI_RS04725 PF00145 C-5 cytosine-specific DNA methylase KUI_RS04735 PF00145 C-5 cytosine-specific DNA methylase KUI_RS04740 PF02678 Pirin KUI_RS04740 PF05726 Pirin C-terminal cupin domain KUI_RS04750 PF07715 TonB-dependent Receptor Plug Domain KUI_RS04750 PF00593 TonB dependent receptor KUI_RS04755 PF00842 Alanine racemase, C-terminal domain KUI_RS04755 PF01168 Alanine racemase, N-terminal domain KUI_RS04790 PF07683 Cobalamin synthesis protein cobW C-terminal domain KUI_RS04790 PF02492 CobW/HypB/UreG, nucleotide-binding domain KUI_RS04800 PF01522 Polysaccharide deacetylase KUI_RS04805 PF08402 TOBE domain KUI_RS04805 PF00005 ABC transporter KUI_RS04815 PF01547 Bacterial extracellular solute-binding protein KUI_RS04835 PF00285 Citrate synthase, C-terminal domain KUI_RS04840 PF03937 Flavinator of succinate dehydrogenase KUI_RS04845 PF13085 2Fe-2S iron-sulfur cluster binding domain KUI_RS04850 PF00890 FAD binding domain KUI_RS04850 PF02910 Fumarate reductase flavoprotein C-term KUI_RS04860 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit KUI_RS04865 PF00056 lactate/malate dehydrogenase, NAD binding domain KUI_RS04865 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KUI_RS04870 PF00171 Aldehyde dehydrogenase family KUI_RS04915 PF05593 RHS Repeat KUI_RS04915 PF03527 RHS protein KUI_RS04925 PF03527 RHS protein KUI_RS04925 PF05593 RHS Repeat KUI_RS04950 PF05593 RHS Repeat KUI_RS04950 PF05488 PAAR motif KUI_RS04960 PF05593 RHS Repeat KUI_RS04960 PF03527 RHS protein KUI_RS04975 PF04717 Type VI secretion system, phage-baseplate injector KUI_RS04985 PF04717 Type VI secretion system, phage-baseplate injector KUI_RS04995 PF04380 Membrane fusogenic activity KUI_RS05000 PF02861 Clp amino terminal domain, pathogenicity island component KUI_RS05000 PF07724 AAA domain (Cdc48 subfamily) KUI_RS05000 PF00004 ATPase family associated with various cellular activities (AAA) KUI_RS05000 PF17871 AAA lid domain KUI_RS05000 PF10431 C-terminal, D2-small domain, of ClpB protein KUI_RS05010 PF04977 Septum formation initiator KUI_RS05015 PF00113 Enolase, C-terminal TIM barrel domain KUI_RS05015 PF03952 Enolase, N-terminal domain KUI_RS05020 PF00793 DAHP synthetase I family KUI_RS05025 PF06418 CTP synthase N-terminus KUI_RS05025 PF00117 Glutamine amidotransferase class-I KUI_RS05035 PF03466 LysR substrate binding domain KUI_RS05035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KUI_RS05040 PF01266 FAD dependent oxidoreductase KUI_RS05045 PF03553 Na+/H+ antiporter family KUI_RS05050 PF00171 Aldehyde dehydrogenase family KUI_RS05055 PF02423 Ornithine cyclodeaminase/mu-crystallin family KUI_RS05060 PF00375 Sodium:dicarboxylate symporter family KUI_RS05065 PF00202 Aminotransferase class-III KUI_RS05070 PF07063 Domain of unknown function (DUF1338) KUI_RS05105 PF04325 Protein of unknown function (DUF465) KUI_RS05115 PF07715 TonB-dependent Receptor Plug Domain KUI_RS05115 PF00593 TonB dependent receptor KUI_RS05125 PF10615 Protein of unknown function (DUF2470) KUI_RS05125 PF01243 Pyridoxamine 5'-phosphate oxidase KUI_RS05140 PF03144 Elongation factor Tu domain 2 KUI_RS05140 PF00009 Elongation factor Tu GTP binding domain KUI_RS05140 PF00679 Elongation factor G C-terminus KUI_RS05145 PF16198 tRNA pseudouridylate synthase B C-terminal domain KUI_RS05145 PF01509 TruB family pseudouridylate synthase (N terminal domain) KUI_RS05150 PF02033 Ribosome-binding factor A KUI_RS05155 PF04760 Translation initiation factor IF-2, N-terminal region KUI_RS05155 PF08364 Bacterial translation initiation factor IF-2 associated region KUI_RS05155 PF00009 Elongation factor Tu GTP binding domain KUI_RS05155 PF11987 Translation-initiation factor 2 KUI_RS05160 PF13184 NusA-like KH domain KUI_RS05160 PF08529 NusA N-terminal domain KUI_RS05165 PF02576 RimP N-terminal domain KUI_RS05165 PF17384 RimP C-terminal SH3 domain KUI_RS05170 PF01479 S4 domain KUI_RS05170 PF00849 RNA pseudouridylate synthase KUI_RS05175 PF04079 Segregation and condensation complex subunit ScpB KUI_RS05185 PF13525 Outer membrane lipoprotein KUI_RS05190 PF13438 Domain of unknown function (DUF4113) KUI_RS05190 PF00817 impB/mucB/samB family KUI_RS05190 PF11799 impB/mucB/samB family C-terminal domain KUI_RS05190 PF11798 IMS family HHH motif KUI_RS05195 PF00717 Peptidase S24-like KUI_RS05200 PF00580 UvrD/REP helicase N-terminal domain KUI_RS05200 PF13361 UvrD-like helicase C-terminal domain KUI_RS05205 PF01189 16S rRNA methyltransferase RsmB/F KUI_RS05205 PF01029 NusB family KUI_RS05210 PF00551 Formyl transferase KUI_RS05215 PF06574 FAD synthetase KUI_RS05215 PF01687 Riboflavin kinase KUI_RS05220 PF08264 Anticodon-binding domain of tRNA KUI_RS05220 PF06827 Zinc finger found in FPG and IleRS KUI_RS05220 PF00133 tRNA synthetases class I (I, L, M and V) KUI_RS05225 PF01252 Signal peptidase (SPase) II KUI_RS05230 PF02441 Flavoprotein KUI_RS05230 PF04127 DNA / pantothenate metabolism flavoprotein KUI_RS05235 PF09335 SNARE associated Golgi protein KUI_RS05240 PF00692 dUTPase KUI_RS05245 PF07715 TonB-dependent Receptor Plug Domain KUI_RS05245 PF00593 TonB dependent receptor KUI_RS05250 PF17484 N-Lobe handle Tf-binding protein B KUI_RS05250 PF01298 C-lobe and N-lobe beta barrels of Tf-binding protein B KUI_RS05250 PF17483 C-lobe handle domain of Tf-binding protein B KUI_RS05260 PF10431 C-terminal, D2-small domain, of ClpB protein KUI_RS05260 PF02861 Clp amino terminal domain, pathogenicity island component KUI_RS05260 PF07724 AAA domain (Cdc48 subfamily) KUI_RS05260 PF17871 AAA lid domain KUI_RS05260 PF00004 ATPase family associated with various cellular activities (AAA) KUI_RS05265 PF00313 'Cold-shock' DNA-binding domain KUI_RS05275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KUI_RS05275 PF03466 LysR substrate binding domain KUI_RS05280 PF00270 DEAD/DEAH box helicase KUI_RS05280 PF00271 Helicase conserved C-terminal domain KUI_RS05280 PF17191 RecG wedge domain KUI_RS05285 PF01042 Endoribonuclease L-PSP KUI_RS05290 PF13416 Bacterial extracellular solute-binding protein KUI_RS05295 PF00528 Binding-protein-dependent transport system inner membrane component KUI_RS05300 PF08402 TOBE domain KUI_RS05300 PF00005 ABC transporter KUI_RS05315 PF00120 Glutamine synthetase, catalytic domain KUI_RS05315 PF03951 Glutamine synthetase, beta-Grasp domain KUI_RS05320 PF04055 Radical SAM superfamily KUI_RS05320 PF06969 HemN C-terminal domain KUI_RS05325 PF01725 Ham1 family KUI_RS05330 PF01138 3' exoribonuclease family, domain 1 KUI_RS05330 PF03725 3' exoribonuclease family, domain 2 KUI_RS05335 PF03755 YicC-like family, N-terminal region KUI_RS05335 PF08340 Domain of unknown function (DUF1732) KUI_RS05340 PF03796 DnaB-like helicase C terminal domain KUI_RS05340 PF00772 DnaB-like helicase N terminal domain KUI_RS05345 PF01281 Ribosomal protein L9, N-terminal domain KUI_RS05345 PF03948 Ribosomal protein L9, C-terminal domain KUI_RS05350 PF01084 Ribosomal protein S18 KUI_RS05360 PF01250 Ribosomal protein S6 KUI_RS05365 PF02649 Type I GTP cyclohydrolase folE2 KUI_RS05370 PF13292 1-deoxy-D-xylulose-5-phosphate synthase KUI_RS05370 PF02780 Transketolase, C-terminal domain KUI_RS05370 PF02779 Transketolase, pyrimidine binding domain KUI_RS05375 PF00348 Polyprenyl synthetase KUI_RS05380 PF02609 Exonuclease VII small subunit KUI_RS05390 PF01979 Amidohydrolase family KUI_RS05395 PF00221 Aromatic amino acid lyase KUI_RS05400 PF17392 Urocanase C-terminal domain KUI_RS05400 PF17391 Urocanase N-terminal domain KUI_RS05400 PF01175 Urocanase Rossmann-like domain KUI_RS05405 PF00392 Bacterial regulatory proteins, gntR family KUI_RS05405 PF07702 UTRA domain KUI_RS05410 PF00581 Rhodanese-like domain KUI_RS05420 PF01435 Peptidase family M48 KUI_RS05425 PF01367 5'-3' exonuclease, C-terminal SAM fold KUI_RS05425 PF01612 3'-5' exonuclease KUI_RS05425 PF00476 DNA polymerase family A KUI_RS05425 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KUI_RS05430 PF03641 Possible lysine decarboxylase KUI_RS05435 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain KUI_RS05435 PF06827 Zinc finger found in FPG and IleRS KUI_RS05435 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain KUI_RS05445 PF00391 PEP-utilising enzyme, mobile domain KUI_RS05445 PF05524 PEP-utilising enzyme, N-terminal KUI_RS05445 PF02896 PEP-utilising enzyme, TIM barrel domain KUI_RS05450 PF00381 PTS HPr component phosphorylation site KUI_RS05460 PF05198 Translation initiation factor IF-3, N-terminal domain KUI_RS05460 PF00707 Translation initiation factor IF-3, C-terminal domain KUI_RS05465 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KUI_RS05465 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KUI_RS05465 PF02824 TGS domain KUI_RS05465 PF03129 Anticodon binding domain KUI_RS05475 PF00004 ATPase family associated with various cellular activities (AAA) KUI_RS05475 PF05362 Lon protease (S16) C-terminal proteolytic domain KUI_RS05475 PF02190 ATP-dependent protease La (LON) substrate-binding domain KUI_RS05480 PF07724 AAA domain (Cdc48 subfamily) KUI_RS05480 PF10431 C-terminal, D2-small domain, of ClpB protein KUI_RS05480 PF06689 ClpX C4-type zinc finger KUI_RS05485 PF00574 Clp protease KUI_RS05490 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KUI_RS05490 PF05698 Bacterial trigger factor protein (TF) C-terminus KUI_RS05490 PF05697 Bacterial trigger factor protein (TF) KUI_RS05500 PF08335 GlnD PII-uridylyltransferase KUI_RS05500 PF03710 Glutamate-ammonia ligase adenylyltransferase KUI_RS05505 PF02677 Epoxyqueuosine reductase QueH KUI_RS05530 PF01464 Transglycosylase SLT domain KUI_RS05545 PF03135 CagE, TrbE, VirB family, component of type IV transporter system KUI_RS05635 PF18818 Metallopeptidase superfamily domain KUI_RS05635 PF08401 Domain of unknown function (DUF1738) KUI_RS05635 PF13362 Toprim domain KUI_RS05650 PF04335 VirB8 protein KUI_RS05655 PF03524 Conjugal transfer protein KUI_RS05660 PF03743 Bacterial conjugation TrbI-like protein KUI_RS05680 PF00437 Type II/IV secretion system protein KUI_RS05685 PF02534 Type IV secretory system Conjugative DNA transfer KUI_RS05780 PF00589 Phage integrase family KUI_RS05780 PF13356 Arm DNA-binding domain KUI_RS05795 PF02824 TGS domain KUI_RS05795 PF04607 Region found in RelA / SpoT proteins KUI_RS05795 PF13291 ACT domain KUI_RS05805 PF00701 Dihydrodipicolinate synthetase family KUI_RS05810 PF06804 NlpB/DapX lipoprotein KUI_RS05840 PF12704 MacB-like periplasmic core domain KUI_RS05840 PF02687 FtsX-like permease family KUI_RS05840 PF00005 ABC transporter KUI_RS05850 PF03781 Sulfatase-modifying factor enzyme 1 KUI_RS05870 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KUI_RS05870 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KUI_RS05875 PF00593 TonB dependent receptor KUI_RS05875 PF07715 TonB-dependent Receptor Plug Domain KUI_RS05880 PF01138 3' exoribonuclease family, domain 1 KUI_RS05880 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain KUI_RS05880 PF03725 3' exoribonuclease family, domain 2 KUI_RS05880 PF00575 S1 RNA binding domain KUI_RS05880 PF00013 KH domain KUI_RS05885 PF00312 Ribosomal protein S15 KUI_RS05895 PF01235 Sodium:alanine symporter family KUI_RS05900 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain KUI_RS05900 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain KUI_RS05905 PF10369 Small subunit of acetolactate synthase KUI_RS05910 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KUI_RS05910 PF00205 Thiamine pyrophosphate enzyme, central domain KUI_RS05910 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KUI_RS05915 PF03883 Peroxide stress protein YaaA KUI_RS05920 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KUI_RS05920 PF02403 Seryl-tRNA synthetase N-terminal domain KUI_RS05925 PF12002 MgsA AAA+ ATPase C terminal KUI_RS05925 PF16193 AAA C-terminal domain KUI_RS05925 PF00004 ATPase family associated with various cellular activities (AAA) KUI_RS05930 PF03548 Outer membrane lipoprotein carrier protein LolA KUI_RS05935 PF01580 FtsK/SpoIIIE family KUI_RS05935 PF09397 Ftsk gamma domain KUI_RS05935 PF17854 FtsK alpha domain KUI_RS05935 PF13491 4TM region of DNA translocase FtsK/SpoIIIE KUI_RS05940 PF07992 Pyridine nucleotide-disulphide oxidoreductase KUI_RS05950 PF04284 Protein of unknown function (DUF441) KUI_RS05960 PF03601 Conserved hypothetical protein 698 KUI_RS05970 PF03797 Autotransporter beta-domain KUI_RS05975 PF01556 DnaJ C terminal domain KUI_RS05975 PF00684 DnaJ central domain KUI_RS05975 PF00226 DnaJ domain KUI_RS05980 PF00012 Hsp70 protein KUI_RS05985 PF01025 GrpE KUI_RS05990 PF00132 Bacterial transferase hexapeptide (six repeats) KUI_RS05995 PF00762 Ferrochelatase KUI_RS06000 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding KUI_RS06000 PF01628 HrcA protein C terminal domain KUI_RS06005 PF01513 ATP-NAD kinase KUI_RS06010 PF02463 RecF/RecN/SMC N terminal domain KUI_RS06015 PF05173 Dihydrodipicolinate reductase, C-terminus KUI_RS06015 PF01113 Dihydrodipicolinate reductase, N-terminus KUI_RS06020 PF04355 SmpA / OmlA family KUI_RS06025 PF01475 Ferric uptake regulator family KUI_RS06030 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain KUI_RS06030 PF01565 FAD binding domain KUI_RS06040 PF01545 Cation efflux family KUI_RS06060 PF00005 ABC transporter KUI_RS06065 PF00528 Binding-protein-dependent transport system inner membrane component KUI_RS06070 PF00528 Binding-protein-dependent transport system inner membrane component KUI_RS06075 PF12849 PBP superfamily domain KUI_RS06080 PF02541 Ppx/GppA phosphatase family KUI_RS06090 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KUI_RS06090 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KUI_RS06090 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KUI_RS06090 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KUI_RS06095 PF00809 Pterin binding enzyme KUI_RS06100 PF01434 Peptidase family M41 KUI_RS06100 PF06480 FtsH Extracellular KUI_RS06100 PF17862 AAA+ lid domain KUI_RS06100 PF00004 ATPase family associated with various cellular activities (AAA) KUI_RS06105 PF01728 FtsJ-like methyltransferase KUI_RS06110 PF01985 CRS1 / YhbY (CRM) domain KUI_RS06115 PF01272 Transcription elongation factor, GreA/GreB, C-term KUI_RS06115 PF03449 Transcription elongation factor, N-terminal KUI_RS06120 PF00860 Permease family KUI_RS06125 PF00210 Ferritin-like domain KUI_RS06130 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KUI_RS06130 PF02142 MGS-like domain KUI_RS06130 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain KUI_RS06135 PF00117 Glutamine amidotransferase class-I KUI_RS06135 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain KUI_RS06140 PF02132 RecR protein KUI_RS06140 PF13662 Toprim domain KUI_RS06145 PF02575 YbaB/EbfC DNA-binding family KUI_RS06155 PF12169 DNA polymerase III subunits gamma and tau domain III KUI_RS06155 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding KUI_RS06155 PF12170 DNA polymerase III tau subunit V interacting with alpha KUI_RS06160 PF13361 UvrD-like helicase C-terminal domain KUI_RS06160 PF12705 PD-(D/E)XK nuclease superfamily KUI_RS06160 PF00580 UvrD/REP helicase N-terminal domain KUI_RS06180 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase KUI_RS06210 PF02899 Phage integrase, N-terminal SAM-like domain KUI_RS06210 PF00589 Phage integrase family KUI_RS06215 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE KUI_RS06220 PF01520 N-acetylmuramoyl-L-alanine amidase KUI_RS06220 PF11741 AMIN domain KUI_RS06225 PF08676 MutL C terminal dimerisation domain KUI_RS06225 PF01119 DNA mismatch repair protein, C-terminal domain KUI_RS06235 PF00586 AIR synthase related protein, N-terminal domain KUI_RS06235 PF02769 AIR synthase related protein, C-terminal domain KUI_RS06240 PF00308 Bacterial dnaA protein KUI_RS06240 PF08299 Bacterial dnaA protein helix-turn-helix KUI_RS06240 PF11638 DnaA N-terminal domain KUI_RS06245 PF01743 Poly A polymerase head domain KUI_RS06245 PF12626 Polymerase A arginine-rich C-terminus KUI_RS06245 PF12627 Probable RNA and SrmB- binding site of polymerase A KUI_RS06250 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) KUI_RS06255 PF00483 Nucleotidyl transferase KUI_RS06260 PF00342 Phosphoglucose isomerase KUI_RS06265 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KUI_RS06305 PF01180 Dihydroorotate dehydrogenase KUI_RS06315 PF00271 Helicase conserved C-terminal domain KUI_RS06315 PF00270 DEAD/DEAH box helicase KUI_RS06325 PF01207 Dihydrouridine synthase (Dus) KUI_RS06330 PF02954 Bacterial regulatory protein, Fis family KUI_RS06335 PF02142 MGS-like domain KUI_RS06335 PF01808 AICARFT/IMPCHase bienzyme KUI_RS06340 PF02075 Crossover junction endodeoxyribonuclease RuvC KUI_RS06345 PF07499 RuvA, C-terminal domain KUI_RS06345 PF01330 RuvA N terminal domain KUI_RS06355 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component KUI_RS06360 PF05496 Holliday junction DNA helicase RuvB P-loop domain KUI_RS06360 PF05491 RuvB C-terminal winged helix domain KUI_RS06360 PF17864 RuvB AAA lid domain KUI_RS06365 PF01266 FAD dependent oxidoreductase KUI_RS06375 PF05690 Thiazole biosynthesis protein ThiG KUI_RS06415 PF05430 S-adenosyl-L-methionine-dependent methyltransferase KUI_RS06415 PF01266 FAD dependent oxidoreductase KUI_RS06420 PF01769 Divalent cation transporter KUI_RS06420 PF03448 MgtE intracellular N domain KUI_RS06420 PF00571 CBS domain KUI_RS06425 PF07516 SecA Wing and Scaffold domain KUI_RS06425 PF01043 SecA preprotein cross-linking domain KUI_RS06425 PF02810 SEC-C motif KUI_RS06425 PF07517 SecA DEAD-like domain KUI_RS06430 PF01476 LysM domain KUI_RS06430 PF08525 Opacity-associated protein A N-terminal motif KUI_RS06430 PF01551 Peptidase family M23 KUI_RS06440 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase KUI_RS06445 PF00091 Tubulin/FtsZ family, GTPase domain KUI_RS06445 PF12327 FtsZ family, C-terminal domain KUI_RS06450 PF02491 SHS2 domain inserted in FTSA KUI_RS06455 PF03799 Cell division protein FtsQ KUI_RS06455 PF08478 POTRA domain, FtsQ-type KUI_RS06460 PF07478 D-ala D-ala ligase C-terminus KUI_RS06460 PF01820 D-ala D-ala ligase N-terminus KUI_RS06465 PF01225 Mur ligase family, catalytic domain KUI_RS06465 PF02875 Mur ligase family, glutamate ligase domain KUI_RS06465 PF08245 Mur ligase middle domain KUI_RS06470 PF03033 Glycosyltransferase family 28 N-terminal domain KUI_RS06470 PF04101 Glycosyltransferase family 28 C-terminal domain KUI_RS06475 PF01098 Cell cycle protein KUI_RS06480 PF02875 Mur ligase family, glutamate ligase domain KUI_RS06480 PF08245 Mur ligase middle domain KUI_RS06485 PF00953 Glycosyl transferase family 4 KUI_RS06490 PF08245 Mur ligase middle domain KUI_RS06490 PF01225 Mur ligase family, catalytic domain KUI_RS06490 PF02875 Mur ligase family, glutamate ligase domain KUI_RS06495 PF00905 Penicillin binding protein transpeptidase domain KUI_RS06495 PF03717 Penicillin-binding Protein dimerisation domain KUI_RS06505 PF01795 MraW methylase family KUI_RS06510 PF02381 MraZ protein, putative antitoxin-like KUI_RS06515 PF06628 Catalase-related immune-responsive KUI_RS06515 PF00199 Catalase KUI_RS06520 PF02091 Glycyl-tRNA synthetase alpha subunit KUI_RS06525 PF02092 Glycyl-tRNA synthetase beta subunit KUI_RS06525 PF05746 DALR anticodon binding domain KUI_RS06545 PF00398 Ribosomal RNA adenine dimethylase KUI_RS06550 PF09312 SurA N-terminal domain KUI_RS06550 PF00639 PPIC-type PPIASE domain KUI_RS06555 PF04453 LPS transport system D KUI_RS06560 PF01636 Phosphotransferase enzyme family KUI_RS06565 PF00483 Nucleotidyl transferase KUI_RS06575 PF00072 Response regulator receiver domain KUI_RS06575 PF00486 Transcriptional regulatory protein, C terminal KUI_RS06580 PF00672 HAMP domain KUI_RS06580 PF00512 His Kinase A (phospho-acceptor) domain KUI_RS06580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KUI_RS06585 PF00749 tRNA synthetases class I (E and Q), catalytic domain KUI_RS06585 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain KUI_RS06590 PF03775 Septum formation inhibitor MinC, C-terminal domain KUI_RS06590 PF05209 Septum formation inhibitor MinC, N-terminal domain KUI_RS06595 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain KUI_RS06600 PF03776 Septum formation topological specificity factor MinE KUI_RS06605 PF12848 ABC transporter KUI_RS06605 PF00005 ABC transporter KUI_RS06615 PF04166 Pyridoxal phosphate biosynthetic protein PdxA KUI_RS06620 PF17760 UvrA interaction domain KUI_RS06620 PF00005 ABC transporter KUI_RS06620 PF17755 UvrA DNA-binding domain KUI_RS06625 PF00899 ThiF family KUI_RS06630 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region KUI_RS06630 PF01243 Pyridoxamine 5'-phosphate oxidase KUI_RS06635 PF00034 Cytochrome c KUI_RS06635 PF03150 Di-haem cytochrome c peroxidase KUI_RS06640 PF03481 Putative GTP-binding controlling metal-binding KUI_RS06640 PF01300 Telomere recombination KUI_RS06645 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain KUI_RS06645 PF02222 ATP-grasp domain KUI_RS06650 PF00731 AIR carboxylase KUI_RS06655 PF01259 SAICAR synthetase KUI_RS06660 PF01116 Fructose-bisphosphate aldolase class-II KUI_RS06665 PF00795 Carbon-nitrogen hydrolase KUI_RS06670 PF00162 Phosphoglycerate kinase KUI_RS06675 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KUI_RS06675 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KUI_RS06680 PF00456 Transketolase, thiamine diphosphate binding domain KUI_RS06680 PF02779 Transketolase, pyrimidine binding domain KUI_RS06680 PF02780 Transketolase, C-terminal domain KUI_RS06685 PF04452 RNA methyltransferase KUI_RS06700 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase KUI_RS06725 PF02547 Queuosine biosynthesis protein KUI_RS06730 PF01702 Queuine tRNA-ribosyltransferase KUI_RS06735 PF02699 Preprotein translocase subunit KUI_RS06740 PF13721 SecD export protein N-terminal TM region KUI_RS06740 PF07549 SecD/SecF GG Motif KUI_RS06740 PF02355 Protein export membrane protein KUI_RS06745 PF07549 SecD/SecF GG Motif KUI_RS06745 PF02355 Protein export membrane protein KUI_RS06750 PF01938 TRAM domain KUI_RS06750 PF04055 Radical SAM superfamily KUI_RS06750 PF00919 Uncharacterized protein family UPF0004 KUI_RS06755 PF02562 PhoH-like protein KUI_RS06760 PF02130 Uncharacterized protein family UPF0054 KUI_RS06765 PF00571 CBS domain KUI_RS06765 PF03471 Transporter associated domain KUI_RS06770 PF00795 Carbon-nitrogen hydrolase KUI_RS06785 PF13018 Extended Signal Peptide of Type V secretion system KUI_RS06785 PF05662 Coiled stalk of trimeric autotransporter adhesin KUI_RS06785 PF05658 Head domain of trimeric autotransporter adhesin KUI_RS06785 PF03895 YadA-like membrane anchor domain KUI_RS06790 PF00005 ABC transporter KUI_RS06790 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KUI_RS06795 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KUI_RS06800 PF00528 Binding-protein-dependent transport system inner membrane component KUI_RS06805 PF00528 Binding-protein-dependent transport system inner membrane component KUI_RS06805 PF12911 N-terminal TM domain of oligopeptide transport permease C KUI_RS06810 PF03576 Peptidase family S58 KUI_RS06820 PF01112 Asparaginase KUI_RS06825 PF00075 RNase H KUI_RS06835 PF16123 Hydroxyacylglutathione hydrolase C-terminus KUI_RS06835 PF00753 Metallo-beta-lactamase superfamily KUI_RS06840 PF01464 Transglycosylase SLT domain KUI_RS06840 PF01476 LysM domain KUI_RS06845 PF01389 OmpA-like transmembrane domain KUI_RS06845 PF00691 OmpA family KUI_RS06855 PF00677 Lumazine binding domain KUI_RS06860 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KUI_RS06860 PF01872 RibD C-terminal domain KUI_RS06865 PF03477 ATP cone domain KUI_RS06870 PF00464 Serine hydroxymethyltransferase KUI_RS06875 PF00579 tRNA synthetases class I (W and Y) KUI_RS06875 PF01479 S4 domain KUI_RS06880 PF03702 Anhydro-N-acetylmuramic acid kinase KUI_RS06885 PF01521 Iron-sulphur cluster biosynthesis KUI_RS06895 PF00380 Ribosomal protein S9/S16 KUI_RS06900 PF00572 Ribosomal protein L13 KUI_RS06905 PF01523 Putative modulator of DNA gyrase KUI_RS06910 PF04751 Protein of unknown function (DUF615) KUI_RS06915 PF02230 Phospholipase/Carboxylesterase KUI_RS06920 PF00749 tRNA synthetases class I (E and Q), catalytic domain KUI_RS06935 PF00294 pfkB family carbohydrate kinase KUI_RS06950 PF02785 Biotin carboxylase C-terminal domain KUI_RS06950 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KUI_RS06950 PF00289 Biotin carboxylase, N-terminal domain KUI_RS06955 PF00364 Biotin-requiring enzyme KUI_RS06960 PF02875 Mur ligase family, glutamate ligase domain KUI_RS06960 PF01225 Mur ligase family, catalytic domain KUI_RS06960 PF08245 Mur ligase middle domain KUI_RS06965 PF08206 Ribonuclease B OB domain KUI_RS06965 PF00773 RNB domain KUI_RS06975 PF00149 Calcineurin-like phosphoesterase KUI_RS06980 PF01553 Acyltransferase KUI_RS06985 PF01979 Amidohydrolase family KUI_RS06990 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KUI_RS06990 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KUI_RS06995 PF03652 Holliday junction resolvase KUI_RS07000 PF02622 Uncharacterized ACR, COG1678 KUI_RS07005 PF00301 Rubredoxin KUI_RS07010 PF02581 Thiamine monophosphate synthase KUI_RS07015 PF00202 Aminotransferase class-III KUI_RS07020 PF00270 DEAD/DEAH box helicase KUI_RS07020 PF00271 Helicase conserved C-terminal domain KUI_RS07030 PF12627 Probable RNA and SrmB- binding site of polymerase A KUI_RS07030 PF01743 Poly A polymerase head domain KUI_RS07055 PF05593 RHS Repeat KUI_RS07055 PF03527 RHS protein KUI_RS07065 PF03527 RHS protein KUI_RS07065 PF05593 RHS Repeat KUI_RS07090 PF04328 Selenoprotein, putative KUI_RS07095 PF13722 5TM C-terminal transporter carbon starvation CstA KUI_RS07095 PF02554 Carbon starvation protein CstA KUI_RS07110 PF05145 Transition state regulatory protein AbrB KUI_RS07115 PF01970 Tripartite tricarboxylate transporter TctA family KUI_RS07130 PF05221 S-adenosyl-L-homocysteine hydrolase KUI_RS07130 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KUI_RS07135 PF00438 S-adenosylmethionine synthetase, N-terminal domain KUI_RS07135 PF02773 S-adenosylmethionine synthetase, C-terminal domain KUI_RS07135 PF02772 S-adenosylmethionine synthetase, central domain KUI_RS07140 PF03279 Bacterial lipid A biosynthesis acyltransferase KUI_RS07145 PF00156 Phosphoribosyl transferase domain KUI_RS07150 PF03372 Endonuclease/Exonuclease/phosphatase family KUI_RS07160 PF07690 Major Facilitator Superfamily KUI_RS07165 PF00561 alpha/beta hydrolase fold KUI_RS07170 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KUI_RS07180 PF00375 Sodium:dicarboxylate symporter family KUI_RS07185 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain KUI_RS07185 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain KUI_RS07185 PF01276 Orn/Lys/Arg decarboxylase, major domain KUI_RS07195 PF00005 ABC transporter KUI_RS07205 PF00245 Alkaline phosphatase KUI_RS07210 PF00196 Bacterial regulatory proteins, luxR family KUI_RS07210 PF00072 Response regulator receiver domain KUI_RS07215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KUI_RS07215 PF00512 His Kinase A (phospho-acceptor) domain KUI_RS07220 PF00034 Cytochrome c KUI_RS07220 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KUI_RS07230 PF03150 Di-haem cytochrome c peroxidase KUI_RS07285 PF04386 Stringent starvation protein B KUI_RS07290 PF00043 Glutathione S-transferase, C-terminal domain KUI_RS07290 PF02798 Glutathione S-transferase, N-terminal domain KUI_RS07295 PF02167 Cytochrome C1 family KUI_RS07300 PF00033 Cytochrome b/b6/petB KUI_RS07300 PF00032 Cytochrome b(C-terminal)/b6/petD KUI_RS07305 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal KUI_RS07305 PF00355 Rieske [2Fe-2S] domain KUI_RS07310 PF01741 Large-conductance mechanosensitive channel, MscL KUI_RS07315 PF01784 NIF3 (NGG1p interacting factor 3) KUI_RS07320 PF00595 PDZ domain KUI_RS07325 PF00902 Sec-independent protein translocase protein (TatC) KUI_RS07330 PF02416 mttA/Hcf106 family KUI_RS07335 PF02416 mttA/Hcf106 family KUI_RS07340 PF00977 Histidine biosynthesis protein KUI_RS07345 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KUI_RS07355 PF01061 ABC-2 type transporter KUI_RS07360 PF00005 ABC transporter KUI_RS07370 PF04333 MlaA lipoprotein KUI_RS07375 PF02470 MlaD protein KUI_RS07380 PF02405 Permease MlaE KUI_RS07385 PF00005 ABC transporter KUI_RS07390 PF02481 DNA recombination-mediator protein A KUI_RS07390 PF18255 DNA processing protein A sterile alpha motif domain KUI_RS07395 PF01327 Polypeptide deformylase KUI_RS07400 PF01168 Alanine racemase, N-terminal domain KUI_RS07405 PF01595 Cyclin M transmembrane N-terminal domain KUI_RS07405 PF03471 Transporter associated domain KUI_RS07405 PF00571 CBS domain KUI_RS07410 PF01380 SIS domain KUI_RS07415 PF01641 SelR domain KUI_RS07415 PF08534 Redoxin KUI_RS07415 PF01625 Peptide methionine sulfoxide reductase KUI_RS07425 PF00436 Single-strand binding protein family KUI_RS07430 PF00436 Single-strand binding protein family KUI_RS07435 PF07690 Major Facilitator Superfamily KUI_RS07440 PF17760 UvrA interaction domain KUI_RS07440 PF17755 UvrA DNA-binding domain KUI_RS07445 PF00593 TonB dependent receptor KUI_RS07445 PF07715 TonB-dependent Receptor Plug Domain KUI_RS07450 PF01966 HD domain KUI_RS07450 PF13286 Phosphohydrolase-associated domain KUI_RS07455 PF00912 Transglycosylase KUI_RS07455 PF00905 Penicillin binding protein transpeptidase domain KUI_RS07455 PF17092 Penicillin-binding protein OB-like domain KUI_RS07460 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain KUI_RS07460 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain KUI_RS07470 PF01491 Frataxin-like domain KUI_RS07475 PF01578 Cytochrome C assembly protein KUI_RS07480 PF05140 ResB-like family KUI_RS07490 PF01926 50S ribosome-binding GTPase KUI_RS07500 PF00490 Delta-aminolevulinic acid dehydratase KUI_RS07505 PF02683 Cytochrome C biogenesis protein transmembrane region KUI_RS07505 PF11412 Disulphide bond corrector protein DsbC KUI_RS07515 PF03616 Sodium/glutamate symporter KUI_RS07520 PF00491 Arginase family KUI_RS07530 PF01196 Ribosomal protein L17 KUI_RS07535 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain KUI_RS07535 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain KUI_RS07535 PF01000 RNA polymerase Rpb3/RpoA insert domain KUI_RS07540 PF00163 Ribosomal protein S4/S9 N-terminal domain KUI_RS07540 PF01479 S4 domain KUI_RS07545 PF00411 Ribosomal protein S11 KUI_RS07550 PF00416 Ribosomal protein S13/S18 KUI_RS07555 PF01176 Translation initiation factor 1A / IF-1 KUI_RS07560 PF00344 SecY translocase KUI_RS07565 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A KUI_RS07570 PF00327 Ribosomal protein L30p/L7e KUI_RS07575 PF03719 Ribosomal protein S5, C-terminal domain KUI_RS07575 PF00333 Ribosomal protein S5, N-terminal domain KUI_RS07580 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast KUI_RS07585 PF00347 Ribosomal protein L6 KUI_RS07590 PF00410 Ribosomal protein S8 KUI_RS07595 PF00253 Ribosomal protein S14p/S29e KUI_RS07600 PF00281 Ribosomal protein L5 KUI_RS07600 PF00673 ribosomal L5P family C-terminus KUI_RS07605 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 KUI_RS07610 PF00238 Ribosomal protein L14p/L23e KUI_RS07615 PF03553 Na+/H+ antiporter family KUI_RS07615 PF13726 Na+-H+ antiporter family KUI_RS07620 PF03553 Na+/H+ antiporter family KUI_RS07620 PF13726 Na+-H+ antiporter family KUI_RS07625 PF00394 Multicopper oxidase KUI_RS07625 PF07732 Multicopper oxidase KUI_RS07630 PF02630 SCO1/SenC KUI_RS07640 PF00403 Heavy-metal-associated domain KUI_RS07650 PF01970 Tripartite tricarboxylate transporter TctA family KUI_RS07660 PF02798 Glutathione S-transferase, N-terminal domain KUI_RS07660 PF00043 Glutathione S-transferase, C-terminal domain KUI_RS07675 PF03895 YadA-like membrane anchor domain KUI_RS07675 PF05658 Head domain of trimeric autotransporter adhesin KUI_RS07675 PF05662 Coiled stalk of trimeric autotransporter adhesin KUI_RS07680 PF13018 Extended Signal Peptide of Type V secretion system KUI_RS07680 PF05662 Coiled stalk of trimeric autotransporter adhesin KUI_RS07680 PF03895 YadA-like membrane anchor domain KUI_RS07680 PF15401 Tryptophan-ring motif of head of Trimeric autotransporter adhesin KUI_RS07685 PF03895 YadA-like membrane anchor domain KUI_RS07685 PF05658 Head domain of trimeric autotransporter adhesin KUI_RS07685 PF05662 Coiled stalk of trimeric autotransporter adhesin KUI_RS07685 PF13018 Extended Signal Peptide of Type V secretion system KUI_RS07685 PF03895 YadA-like membrane anchor domain KUI_RS07685 PF05658 Head domain of trimeric autotransporter adhesin KUI_RS07685 PF13018 Extended Signal Peptide of Type V secretion system KUI_RS07685 PF05662 Coiled stalk of trimeric autotransporter adhesin KUI_RS07690 PF05662 Coiled stalk of trimeric autotransporter adhesin KUI_RS07690 PF03895 YadA-like membrane anchor domain KUI_RS07690 PF15401 Tryptophan-ring motif of head of Trimeric autotransporter adhesin KUI_RS07690 PF13018 Extended Signal Peptide of Type V secretion system KUI_RS07695 PF00366 Ribosomal protein S17 KUI_RS07700 PF00831 Ribosomal L29 protein KUI_RS07705 PF00252 Ribosomal protein L16p/L10e KUI_RS07710 PF00189 Ribosomal protein S3, C-terminal domain KUI_RS07710 PF07650 KH domain KUI_RS07715 PF00237 Ribosomal protein L22p/L17e KUI_RS07720 PF00203 Ribosomal protein S19 KUI_RS07725 PF03947 Ribosomal Proteins L2, C-terminal domain KUI_RS07725 PF00181 Ribosomal Proteins L2, RNA binding domain KUI_RS07730 PF00276 Ribosomal protein L23 KUI_RS07735 PF00573 Ribosomal protein L4/L1 family KUI_RS07740 PF00297 Ribosomal protein L3 KUI_RS07745 PF02646 RmuC family KUI_RS07750 PF03180 NLPA lipoprotein KUI_RS07755 PF00528 Binding-protein-dependent transport system inner membrane component KUI_RS07760 PF09383 NIL domain KUI_RS07760 PF00005 ABC transporter KUI_RS07780 PF00338 Ribosomal protein S10p/S20e KUI_RS07785 PF00005 ABC transporter KUI_RS07785 PF00664 ABC transporter transmembrane region KUI_RS07790 PF00009 Elongation factor Tu GTP binding domain KUI_RS07790 PF03144 Elongation factor Tu domain 2 KUI_RS07790 PF03143 Elongation factor Tu C-terminal domain KUI_RS07795 PF14492 Elongation Factor G, domain II KUI_RS07795 PF00679 Elongation factor G C-terminus KUI_RS07795 PF03764 Elongation factor G, domain IV KUI_RS07795 PF03144 Elongation factor Tu domain 2 KUI_RS07795 PF00009 Elongation factor Tu GTP binding domain KUI_RS07800 PF00177 Ribosomal protein S7p/S5e KUI_RS07805 PF00164 Ribosomal protein S12/S23 KUI_RS07825 PF03328 HpcH/HpaI aldolase/citrate lyase family KUI_RS07830 PF02515 CoA-transferase family III KUI_RS07840 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KUI_RS07840 PF02770 Acyl-CoA dehydrogenase, middle domain KUI_RS07840 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KUI_RS07860 PF01555 DNA methylase KUI_RS07865 PF06945 Protein of unknown function (DUF1289) KUI_RS07870 PF00696 Amino acid kinase family KUI_RS07875 PF00202 Aminotransferase class-III KUI_RS07880 PF02774 Semialdehyde dehydrogenase, dimerisation domain KUI_RS07880 PF01118 Semialdehyde dehydrogenase, NAD binding domain KUI_RS07895 PF00491 Arginase family KUI_RS07900 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KUI_RS07900 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KUI_RS07905 PF04998 RNA polymerase Rpb1, domain 5 KUI_RS07905 PF04983 RNA polymerase Rpb1, domain 3 KUI_RS07905 PF00623 RNA polymerase Rpb1, domain 2 KUI_RS07905 PF04997 RNA polymerase Rpb1, domain 1 KUI_RS07905 PF05000 RNA polymerase Rpb1, domain 4 KUI_RS07910 PF04561 RNA polymerase Rpb2, domain 2 KUI_RS07910 PF04565 RNA polymerase Rpb2, domain 3 KUI_RS07910 PF10385 RNA polymerase beta subunit external 1 domain KUI_RS07910 PF00562 RNA polymerase Rpb2, domain 6 KUI_RS07910 PF04560 RNA polymerase Rpb2, domain 7 KUI_RS07910 PF04563 RNA polymerase beta subunit KUI_RS07915 PF16320 Ribosomal protein L7/L12 dimerisation domain KUI_RS07915 PF00542 Ribosomal protein L7/L12 C-terminal domain KUI_RS07920 PF00466 Ribosomal protein L10 KUI_RS07925 PF00687 Ribosomal protein L1p/L10e family KUI_RS07930 PF03946 Ribosomal protein L11, N-terminal domain KUI_RS07930 PF00298 Ribosomal protein L11, RNA binding domain KUI_RS07935 PF02357 Transcription termination factor nusG KUI_RS07935 PF00467 KOW motif KUI_RS07940 PF00584 SecE/Sec61-gamma subunits of protein translocation complex KUI_RS07950 PF03144 Elongation factor Tu domain 2 KUI_RS07950 PF03143 Elongation factor Tu C-terminal domain KUI_RS07950 PF00009 Elongation factor Tu GTP binding domain KUI_RS07975 PF17762 HTH domain found in ParB protein KUI_RS07975 PF02195 ParB-like nuclease domain KUI_RS07980 PF13614 AAA domain KUI_RS07985 PF02527 rRNA small subunit methyltransferase G KUI_RS07990 PF13932 GidA associated domain KUI_RS07990 PF01134 Glucose inhibited division protein A KUI_RS07995 PF01230 HIT domain KUI_RS08000 PF02096 60Kd inner membrane protein KUI_RS08000 PF14849 YidC periplasmic domain KUI_RS08005 PF01809 Putative membrane protein insertion efficiency factor KUI_RS08010 PF00825 Ribonuclease P KUI_RS08015 PF00468 Ribosomal protein L34 KUI_RS08055 PF03527 RHS protein KUI_RS08055 PF05593 RHS Repeat KUI_RS08065 PF05593 RHS Repeat KUI_RS08065 PF03527 RHS protein