LOCUS NC_030403 2742 bp DNA circular VRL 13-AUG-2018 DEFINITION Telfairia mosaic virus isolate Cameroon-Bakundu Bangang-Telfairia-20-14 segment DNA-A, complete sequence. ACCESSION NC_030403 VERSION NC_030403.1 DBLINK BioProject: PRJNA485481 KEYWORDS RefSeq. SOURCE Telfairia mosaic virus ORGANISM Telfairia mosaic virus Viruses; ssDNA viruses; Geminiviridae; Begomovirus; unclassified Begomovirus. REFERENCE 1 (bases 1 to 2742) AUTHORS Leke,W.N., Khatabi,B., Fondong,V.N. and Brown,J.K. TITLE Complete genome sequence of a new bipartite begomovirus infecting fluted pumpkin (Telfairia occidentalis) plants in Cameroon JOURNAL Arch. Virol. (2016) In press PUBMED 27262944 REMARK Publication Status: Available-Online prior to print REFERENCE 2 (bases 1 to 2742) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (30-JUN-2016) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 2742) AUTHORS Leke,W.N. and Fondong,V.N. TITLE Direct Submission JOURNAL Submitted (19-AUG-2015) Annual Crops, Institute of Agricultural Research for Development (IRAD), Nkolbisson, Yaounde, Central Region 2123 Messa, Cameroon COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to KT454832. ##Assembly-Data-START## Assembly Method :: SeqManNGen v. 2.2 Sequencing Technology :: Illumina ##Assembly-Data-END## COMPLETENESS: full length. FEATURES Location/Qualifiers source 1..2742 /organism="Telfairia mosaic virus" /mol_type="genomic DNA" /isolate="Cameroon-Bakundu Bangang-Telfairia-20-14" /host="Telfairia occidentalis" /db_xref="taxon:1859135" /segment="A" /country="Cameroon" /collection_date="2014" /collected_by="Walter Leke" gene 67..489 /locus_tag="BAX54_sAgp1" /db_xref="GeneID:28218364" CDS 67..489 /locus_tag="BAX54_sAgp1" /codon_start=1 /product="AV2" /protein_id="YP_009259492.1" /db_xref="GeneID:28218364" /translation="MHAESYSAYVLSLYTWSPYFHYRNMWDPLLNEFPESVHGFRSML AVKYLQAVEQTYEPNTLGHDLIRDLICVIRAKDYVEATRRYNYFHARLEGASKAELRQ PIYQPCCCPHCPRHKQTTIMDVSSQLPKAQDVQDVQKS" gene 299..1075 /locus_tag="BAX54_sAgp2" /db_xref="GeneID:28218359" CDS 299..1075 /locus_tag="BAX54_sAgp2" /codon_start=1 /product="AV1" /protein_id="YP_009259493.1" /db_xref="GeneID:28218359" /translation="MSKRPGDIIISTPVSKVRRRLNFDSPYTNRVAVPIVQGTSKRRS WTYRPSYRKPRMYRMYRSPDVPRGCEGPCKIQSFDQRDSVVHTGNVRCLSDVTRGGGL THRTGKRFCIKSIYVLGKVWMDENVKKSNHTNTCMFWLVRDRRPYGNSPQDFGQVFNM FDNEPSTATVMNDKRDRYQVLRRFQVTVTGGPSGCKEAAIVKRFFRLNHHVTYNHQEG AKYENHTENALLLYMACTHASNPVYASLKIRMYFYDSVLN" gene complement(1072..1476) /locus_tag="BAX54_sAgp3" /db_xref="GeneID:28218360" CDS complement(1072..1476) /locus_tag="BAX54_sAgp3" /codon_start=1 /product="AC3" /protein_id="YP_009259494.1" /db_xref="GeneID:28218360" /translation="MDLRTGELITADQAQNSVYFWTIHNPLYFKIIDHAERPFSFPHD IISIQIRFNHNLRKELGIHKCFLNFKVWTTLRPPTGLFLKVFRTQVVKYLDMVGVISI NFVVRAVAHVLFDVLDGTIDVIDKHDIKFKLY" gene complement(1217..1624) /locus_tag="BAX54_sAgp4" /db_xref="GeneID:28218361" CDS complement(1217..1624) /locus_tag="BAX54_sAgp4" /codon_start=1 /product="AC2" /protein_id="YP_009259495.1" /db_xref="GeneID:28218361" /translation="MRASSPSKSHCSQVPIKVSHQIAKKKAIRRKRIDLDCGCSFYLH IDCALNGFAHRGTHHCGSSAEFRLLLDDTQSPVLQNNRPRGTALLVPPRHNINSNPVQ PQPEEGTGDSQVFSELQSLDDLTSSDWSFLKSL" gene complement(1524..2609) /locus_tag="BAX54_sAgp5" /db_xref="GeneID:28218362" CDS complement(1524..2609) /locus_tag="BAX54_sAgp5" /codon_start=1 /product="AC1" /protein_id="YP_009259496.1" /db_xref="GeneID:28218362" /translation="MRHPRFRVQGKNIFLTYPKCSIAKEALLAFLRNLSLPTNPKYIK ICRELHQNGEPHLHVLIQFEGKLTCTNNRLFDCVHPSCSTSFHPNIQGAKSSSDVKSY LDKDGDTLEWGEFQIDGRSARGGQQSANDAYAKALNTGSKSEALNVIRELAPKDYLLH FHNLNSNLDRIFQTPPETYTSPFRSSSFTRVPEELEEWVSENVKPAAARPFRPNSIVI EGDSRTGKTCWARSLGPHNYLCGHLDLSPKVYSNEAWYNVIDDVDPHYLKHFKEFMGA QRDWQSNTKYGKPIQIKGGIPTIFLCNPGSTSSYKDFLDEEKNAALKAWALKNASFVT IQEPLFSSADQGQSPNRQEEGDTTEAH" gene complement(2165..2455) /locus_tag="BAX54_sAgp6" /db_xref="GeneID:28218363" CDS complement(2165..2455) /locus_tag="BAX54_sAgp6" /codon_start=1 /product="AC4" /protein_id="YP_009259497.1" /db_xref="GeneID:28218363" /translation="MGSLISTCLSSSRGNSRAPTIVSSIVYTQAVAPVSTPTFRALSP VPTSSRIWTRTEIHSNGESFRSTGDRHEGANNQLTTHMQRHLTQEVNRRLLM" ORIGIN 1 accggatggc cgcccgccca tctcagccgt acggtcccac gcactacttc ctgtcggcca 61 atcataatgc acgctgaaag ctactctgcg tatgtgttgt ctttatatac gtggtcccca 121 tacttccatt atcgcaatat gtgggacccc cttctgaatg agtttcccga atcagttcac 181 ggtttccggt ctatgttagc cgtaaagtat ttgcaggctg tggagcagac gtacgagccc 241 aacacgttgg gccacgattt gattcgggat ttgatttgtg ttatacgtgc caaggactat 301 gtcgaagcga cccggagata taattatttc cacgcccgtc tcgaaggtgc gtcgaaggct 361 gaacttcgac agcccatata ccaaccgtgt tgctgtcccc attgtccaag gcacaagcaa 421 acgacgatca tggacgtatc gtcccagtta ccgaaagccc aggatgtaca ggatgtacag 481 aagtcctgat gtcccacgtg gctgtgaagg accatgtaag atccagtcgt ttgatcagcg 541 tgattcagtc gtccataccg gtaatgttag gtgtctaagc gatgtgactc gcggtggtgg 601 tttaacacat cgcactggta aacggttttg tattaagtca atttacgtct taggtaaggt 661 atggatggac gagaatgtta aaaagtccaa ccacactaac acatgtatgt tttggttagt 721 tagagataga cgtccgtatg gtaacagtcc tcaggacttt ggtcaggttt ttaacatgtt 781 tgataatgag ccgagtaccg caacagttat gaacgacaag cgtgatcgct atcaggtatt 841 gcggaggttc caggtaactg taaccggagg cccgtctgga tgtaaggagg ctgctattgt 901 gaagagattc tttcgtctca atcaccatgt cacttacaac caccaggagg gcgctaagta 961 cgagaatcac acggagaatg ctttgctttt gtatatggcg tgtactcacg cctctaaccc 1021 tgtgtatgca agtttgaaga tacggatgta tttttatgat tccgtgttaa attaataaag 1081 cttgaatttt atatcatgtt tgtcaattac atcaatcgtc ccgtctagga cgtcaaacag 1141 tacatgagcg acagctctaa cgacaaaatt aatggaaatt acaccgacca tatctaggta 1201 tttcacaacc tgagtcctaa agacttttaa gaaaagacca gtcggaggac gtaaggtcgt 1261 ccagactttg aagttcagaa aacacttgtg aatccccagt tccttcctca ggttgtggtt 1321 gaaccggatt tgaattgata ttatgtcgtg ggggaacgag aagggccgtt ccgcgtggtc 1381 tattattttg aagtacaggg gattgtgtat cgtccaaaag tagacggaat tctgcgcttg 1441 atccgcagtg atgagttccc cggtgcgcaa atccattcag agcgcagtct atgtgcaggt 1501 agaacgagca gccgcaatcg agatcaatgc gcttccgtcg tatcgccttc ttcttggcga 1561 tttggtgact gaccttgatc ggcacttgag aacagtggct cttggatggt gacgaagctc 1621 gcattcttta atgcccaagc tttcaaagct gcattctttt cttcgtccaa gaaatcttta 1681 tacgaggacg tcgacccagg attgcacagg aagatagtgg gaattccgcc tttaatttga 1741 atcggctttc cgtactttgt gttgctttgc cagtcccgct gggcccccat gaattcctta 1801 aagtgcttta gatagtgcgg gtcgacgtca tcaatgacgt tataccatgc ttcgttactg 1861 tacacctttg ggcttaggtc caaatgaccg cacagataat tgtgcggacc caacgaacgg 1921 gcccaacaag ttttgcccgt cctactatcc ccctctatta ctatactatt gggcctaaaa 1981 ggccgcgcag ctgcaggctt gacgttttca ctgacccatt cttcaagttc ctccggaact 2041 ctcgtgaaag aagacgaccg gaagggagat gtgtatgttt ccggcggagt ctggaaaata 2101 cgatctaaat tactgtttaa attgtgaaaa tgtaataaat aatccttggg ggccaactct 2161 cgtattacat taagagcctc cgatttactt cctgtgttaa gtgcctttgc atatgcgtcg 2221 ttagctgatt gttggccccc tcgtgccgat ctcccgtcga tctgaaactc tccccattcg 2281 agtgtatctc cgtccttgtc caaatacgac ttgacgtcgg aactggactt agcgccctga 2341 atgttggggt ggaaactggt gctacagctt gggtgtacac aatcgaagag acgattgttg 2401 gtgcacgtga gtttcccctc gaactggata agcacgtgga gatgaggctc cccattctga 2461 tgaagctctc gacagatttt gatgtattta ggatttgtgg gaagcgacag gtttcggaga 2521 aacgccaaga gagcctcttt tgcgatagag catttgggat atgtgaggaa tatattttta 2581 ccctgtactc taaaacgtgg gtgtctcatt ttgacaatcg attggagaca ccctcccgca 2641 actctatccc ttataataga gtcaatatat actgtctcta tatggcatta ttgtaaatat 2701 gtaaaggtat acagacctac tagcggccat ccgtttaata tt //