locus-tag class description RPIT_RS00005 PF01507 Phosphoadenosine phosphosulfate reductase family RPIT_RS00010 PF00009 Elongation factor Tu GTP binding domain RPIT_RS00015 PF01925 Sulfite exporter TauE/SafE RPIT_RS00025 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II RPIT_RS00025 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase RPIT_RS00025 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg RPIT_RS00030 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RPIT_RS00035 PF10414 Sirohaem synthase dimerisation region RPIT_RS00035 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RPIT_RS00040 PF10414 Sirohaem synthase dimerisation region RPIT_RS00040 PF14824 Sirohaem biosynthesis protein central RPIT_RS00040 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RPIT_RS00050 PF00364 Biotin-requiring enzyme RPIT_RS00050 PF00682 HMGL-like RPIT_RS00050 PF02436 Conserved carboxylase domain RPIT_RS00065 PF00149 Calcineurin-like phosphoesterase RPIT_RS00065 PF02872 5'-nucleotidase, C-terminal domain RPIT_RS00080 PF13472 GDSL-like Lipase/Acylhydrolase family RPIT_RS00095 PF03462 PCRF domain RPIT_RS00095 PF00472 RF-1 domain RPIT_RS00100 PF01661 Macro domain RPIT_RS00110 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase RPIT_RS00115 PF13847 Methyltransferase domain RPIT_RS00115 PF17827 PrmC N-terminal domain RPIT_RS00135 PF00722 Glycosyl hydrolases family 16 RPIT_RS00155 PF01068 ATP dependent DNA ligase domain RPIT_RS00155 PF04679 ATP dependent DNA ligase C terminal region RPIT_RS00170 PF01068 ATP dependent DNA ligase domain RPIT_RS00170 PF04679 ATP dependent DNA ligase C terminal region RPIT_RS00195 PF02903 Alpha amylase, N-terminal ig-like domain RPIT_RS00195 PF00128 Alpha amylase, catalytic domain RPIT_RS00220 PF00872 Transposase, Mutator family RPIT_RS00275 PF00196 Bacterial regulatory proteins, luxR family RPIT_RS00300 PF08768 Domain of unknown function (DUF1794) RPIT_RS00315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPIT_RS00315 PF00512 His Kinase A (phospho-acceptor) domain RPIT_RS00315 PF00672 HAMP domain RPIT_RS00320 PF00072 Response regulator receiver domain RPIT_RS00320 PF00486 Transcriptional regulatory protein, C terminal RPIT_RS00325 PF01451 Low molecular weight phosphotyrosine protein phosphatase RPIT_RS00330 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain RPIT_RS00330 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain RPIT_RS00335 PF02872 5'-nucleotidase, C-terminal domain RPIT_RS00335 PF00746 LPXTG cell wall anchor motif RPIT_RS00335 PF00565 Staphylococcal nuclease homologue RPIT_RS00335 PF00149 Calcineurin-like phosphoesterase RPIT_RS00340 PF00676 Dehydrogenase E1 component RPIT_RS00345 PF02779 Transketolase, pyrimidine binding domain RPIT_RS00345 PF02780 Transketolase, C-terminal domain RPIT_RS00350 PF00364 Biotin-requiring enzyme RPIT_RS00350 PF02817 e3 binding domain RPIT_RS00350 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) RPIT_RS00360 PF01168 Alanine racemase, N-terminal domain RPIT_RS00360 PF00842 Alanine racemase, C-terminal domain RPIT_RS00370 PF03588 Leucyl/phenylalanyl-tRNA protein transferase RPIT_RS00375 PF06827 Zinc finger found in FPG and IleRS RPIT_RS00375 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain RPIT_RS00405 PF01842 ACT domain RPIT_RS00405 PF00800 Prephenate dehydratase RPIT_RS00410 PF02142 MGS-like domain RPIT_RS00410 PF00781 Diacylglycerol kinase catalytic domain RPIT_RS00415 PF07690 Major Facilitator Superfamily RPIT_RS00420 PF02403 Seryl-tRNA synthetase N-terminal domain RPIT_RS00420 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RPIT_RS00430 PF01965 DJ-1/PfpI family RPIT_RS00435 PF16657 Maltogenic Amylase, C-terminal domain RPIT_RS00435 PF00128 Alpha amylase, catalytic domain RPIT_RS00440 PF00296 Luciferase-like monooxygenase RPIT_RS00455 PF00764 Arginosuccinate synthase RPIT_RS00470 PF00535 Glycosyl transferase family 2 RPIT_RS00480 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain RPIT_RS00480 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain RPIT_RS00480 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain RPIT_RS00485 PF06445 GyrI-like small molecule binding domain RPIT_RS00485 PF12833 Helix-turn-helix domain RPIT_RS00515 PF00005 ABC transporter RPIT_RS00515 PF14524 Wzt C-terminal domain RPIT_RS00530 PF02350 UDP-N-acetylglucosamine 2-epimerase RPIT_RS00535 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain RPIT_RS00535 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain RPIT_RS00535 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain RPIT_RS00555 PF00296 Luciferase-like monooxygenase RPIT_RS00560 PF00535 Glycosyl transferase family 2 RPIT_RS00565 PF00132 Bacterial transferase hexapeptide (six repeats) RPIT_RS00570 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family RPIT_RS00575 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RPIT_RS00575 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RPIT_RS00580 PF00155 Aminotransferase class I and II RPIT_RS00585 PF00107 Zinc-binding dehydrogenase RPIT_RS00585 PF08240 Alcohol dehydrogenase GroES-like domain RPIT_RS00590 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain RPIT_RS00590 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain RPIT_RS00590 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain RPIT_RS00600 PF02801 Beta-ketoacyl synthase, C-terminal domain RPIT_RS00600 PF00698 Acyl transferase domain RPIT_RS00600 PF08240 Alcohol dehydrogenase GroES-like domain RPIT_RS00600 PF08659 KR domain RPIT_RS00600 PF00550 Phosphopantetheine attachment site RPIT_RS00600 PF14765 Polyketide synthase dehydratase RPIT_RS00600 PF00107 Zinc-binding dehydrogenase RPIT_RS00600 PF00109 Beta-ketoacyl synthase, N-terminal domain RPIT_RS00600 PF16197 Ketoacyl-synthetase C-terminal extension RPIT_RS00605 PF00342 Phosphoglucose isomerase RPIT_RS00610 PF02698 DUF218 domain RPIT_RS00615 PF02386 Cation transport protein RPIT_RS00620 PF02080 TrkA-C domain RPIT_RS00620 PF02254 TrkA-N domain RPIT_RS00625 PF08220 DeoR-like helix-turn-helix domain RPIT_RS00625 PF00455 DeoR C terminal sensor domain RPIT_RS00635 PF00750 tRNA synthetases class I (R) RPIT_RS00635 PF05746 DALR anticodon binding domain RPIT_RS00635 PF03485 Arginyl tRNA synthetase N terminal domain RPIT_RS00650 PF08044 Domain of unknown function (DUF1707) RPIT_RS00655 PF00365 Phosphofructokinase RPIT_RS00660 PF02913 FAD linked oxidases, C-terminal domain RPIT_RS00660 PF01565 FAD binding domain RPIT_RS00670 PF07555 beta-N-acetylglucosaminidase RPIT_RS00670 PF02838 Glycosyl hydrolase family 20, domain 2 RPIT_RS00670 PF00754 F5/8 type C domain RPIT_RS00670 PF00963 Cohesin domain RPIT_RS00670 PF00041 Fibronectin type III domain RPIT_RS00680 PF13419 Haloacid dehalogenase-like hydrolase RPIT_RS00695 PF03180 NLPA lipoprotein RPIT_RS00700 PF00528 Binding-protein-dependent transport system inner membrane component RPIT_RS00705 PF09383 NIL domain RPIT_RS00705 PF00005 ABC transporter RPIT_RS00720 PF01068 ATP dependent DNA ligase domain RPIT_RS00725 PF01914 MarC family integral membrane protein RPIT_RS00730 PF01546 Peptidase family M20/M25/M40 RPIT_RS00730 PF07687 Peptidase dimerisation domain RPIT_RS00735 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain RPIT_RS00735 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain RPIT_RS00740 PF00300 Histidine phosphatase superfamily (branch 1) RPIT_RS00750 PF01740 STAS domain RPIT_RS00750 PF00916 Sulfate permease family RPIT_RS00755 PF13180 PDZ domain RPIT_RS00760 PF05175 Methyltransferase small domain RPIT_RS00760 PF08468 Methyltransferase small domain N-terminal RPIT_RS00780 PF02638 Glycosyl hydrolase-like 10 RPIT_RS00785 PF00199 Catalase RPIT_RS00785 PF18011 C-terminal domain found in long catalases RPIT_RS00785 PF06628 Catalase-related immune-responsive RPIT_RS00795 PF00067 Cytochrome P450 RPIT_RS00825 PF00069 Protein kinase domain RPIT_RS00830 PF03372 Endonuclease/Exonuclease/phosphatase family RPIT_RS00840 PF01734 Patatin-like phospholipase RPIT_RS00870 PF00356 Bacterial regulatory proteins, lacI family RPIT_RS00875 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RPIT_RS00875 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RPIT_RS00885 PF00860 Permease family RPIT_RS00905 PF00149 Calcineurin-like phosphoesterase RPIT_RS00905 PF00746 LPXTG cell wall anchor motif RPIT_RS00905 PF00565 Staphylococcal nuclease homologue RPIT_RS00905 PF02872 5'-nucleotidase, C-terminal domain RPIT_RS00975 PF17862 AAA+ lid domain RPIT_RS00975 PF01434 Peptidase family M41 RPIT_RS00975 PF06480 FtsH Extracellular RPIT_RS00975 PF00004 ATPase family associated with various cellular activities (AAA) RPIT_RS00995 PF00392 Bacterial regulatory proteins, gntR family RPIT_RS00995 PF07729 FCD domain RPIT_RS01010 PF00196 Bacterial regulatory proteins, luxR family RPIT_RS01010 PF00072 Response regulator receiver domain RPIT_RS01015 PF07730 Histidine kinase RPIT_RS01025 PF00005 ABC transporter RPIT_RS01040 PF00528 Binding-protein-dependent transport system inner membrane component RPIT_RS01045 PF00528 Binding-protein-dependent transport system inner membrane component RPIT_RS01050 PF02837 Glycosyl hydrolases family 2, sugar binding domain RPIT_RS01050 PF16353 Domain of unknown function(DUF4981) RPIT_RS01050 PF02929 Beta galactosidase small chain RPIT_RS01050 PF02836 Glycosyl hydrolases family 2, TIM barrel domain RPIT_RS01055 PF00356 Bacterial regulatory proteins, lacI family RPIT_RS01080 PF13344 Haloacid dehalogenase-like hydrolase RPIT_RS01085 PF02754 Cysteine-rich domain RPIT_RS01085 PF13183 4Fe-4S dicluster domain RPIT_RS01090 PF00890 FAD binding domain RPIT_RS01095 PF01266 FAD dependent oxidoreductase RPIT_RS01095 PF04324 BFD-like [2Fe-2S] binding domain RPIT_RS01175 PF12169 DNA polymerase III subunits gamma and tau domain III RPIT_RS01180 PF02575 YbaB/EbfC DNA-binding family RPIT_RS01185 PF02132 RecR protein RPIT_RS01185 PF13662 Toprim domain RPIT_RS01195 PF00392 Bacterial regulatory proteins, gntR family RPIT_RS01200 PF01680 SOR/SNZ family RPIT_RS01205 PF01174 SNO glutamine amidotransferase family RPIT_RS01210 PF00005 ABC transporter RPIT_RS01225 PF03949 Malic enzyme, NAD binding domain RPIT_RS01225 PF00390 Malic enzyme, N-terminal domain RPIT_RS01235 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RPIT_RS01235 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RPIT_RS01240 PF13344 Haloacid dehalogenase-like hydrolase RPIT_RS01245 PF00381 PTS HPr component phosphorylation site RPIT_RS01255 PF00462 Glutaredoxin RPIT_RS01260 PF01569 PAP2 superfamily RPIT_RS01265 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain RPIT_RS01265 PF00591 Glycosyl transferase family, a/b domain RPIT_RS01265 PF02885 Glycosyl transferase family, helical bundle domain RPIT_RS01270 PF13407 Periplasmic binding protein domain RPIT_RS01275 PF00005 ABC transporter RPIT_RS01280 PF02653 Branched-chain amino acid transport system / permease component RPIT_RS01295 PF06964 Alpha-L-arabinofuranosidase C-terminal domain RPIT_RS01295 PF02018 Carbohydrate binding domain RPIT_RS01305 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain RPIT_RS01305 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain RPIT_RS01335 PF00912 Transglycosylase RPIT_RS01335 PF00905 Penicillin binding protein transpeptidase domain RPIT_RS01340 PF02467 Transcription factor WhiB RPIT_RS01345 PF00293 NUDIX domain RPIT_RS01350 PF08534 Redoxin RPIT_RS01355 PF00730 HhH-GPD superfamily base excision DNA repair protein RPIT_RS01355 PF10576 Iron-sulfur binding domain of endonuclease III RPIT_RS01355 PF00633 Helix-hairpin-helix motif RPIT_RS01370 PF08241 Methyltransferase domain RPIT_RS01380 PF00437 Type II/IV secretion system protein RPIT_RS01395 PF09369 Domain of unknown function (DUF1998) RPIT_RS01395 PF00271 Helicase conserved C-terminal domain RPIT_RS01395 PF00270 DEAD/DEAH box helicase RPIT_RS01415 PF00248 Aldo/keto reductase family RPIT_RS01420 PF05175 Methyltransferase small domain RPIT_RS01420 PF17827 PrmC N-terminal domain RPIT_RS01425 PF00005 ABC transporter RPIT_RS01430 PF01131 DNA topoisomerase RPIT_RS01430 PF01751 Toprim domain RPIT_RS01430 PF13368 Topoisomerase C-terminal repeat RPIT_RS01440 PF02223 Thymidylate kinase RPIT_RS01450 PF12169 DNA polymerase III subunits gamma and tau domain III RPIT_RS01460 PF04468 PSP1 C-terminal conserved region RPIT_RS01465 PF00561 alpha/beta hydrolase fold RPIT_RS01475 PF01593 Flavin containing amine oxidoreductase RPIT_RS01485 PF00543 Nitrogen regulatory protein P-II RPIT_RS01490 PF00909 Ammonium Transporter Family RPIT_RS01505 PF02537 CrcB-like protein, Camphor Resistance (CrcB) RPIT_RS01510 PF02537 CrcB-like protein, Camphor Resistance (CrcB) RPIT_RS01515 PF00719 Inorganic pyrophosphatase RPIT_RS01520 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family RPIT_RS01530 PF09179 TilS substrate binding domain RPIT_RS01530 PF01171 PP-loop family RPIT_RS01535 PF00156 Phosphoribosyl transferase domain RPIT_RS01540 PF00004 ATPase family associated with various cellular activities (AAA) RPIT_RS01540 PF01434 Peptidase family M41 RPIT_RS01540 PF06480 FtsH Extracellular RPIT_RS01540 PF17862 AAA+ lid domain RPIT_RS01545 PF01227 GTP cyclohydrolase I RPIT_RS01550 PF00809 Pterin binding enzyme RPIT_RS01555 PF02152 Dihydroneopterin aldolase RPIT_RS01560 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) RPIT_RS01570 PF00809 Pterin binding enzyme RPIT_RS01580 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit RPIT_RS01590 PF02861 Clp amino terminal domain, pathogenicity island component RPIT_RS01590 PF17871 AAA lid domain RPIT_RS01590 PF07724 AAA domain (Cdc48 subfamily) RPIT_RS01590 PF10431 C-terminal, D2-small domain, of ClpB protein RPIT_RS01590 PF00004 ATPase family associated with various cellular activities (AAA) RPIT_RS01595 PF01066 CDP-alcohol phosphatidyltransferase RPIT_RS01600 PF08402 TOBE domain RPIT_RS01600 PF00005 ABC transporter RPIT_RS01610 PF02457 DisA bacterial checkpoint controller nucleotide-binding RPIT_RS01610 PF10635 DisA bacterial checkpoint controller linker region RPIT_RS01620 PF13411 MerR HTH family regulatory protein RPIT_RS01625 PF06745 KaiC RPIT_RS01625 PF18073 Rubredoxin metal binding domain RPIT_RS01650 PF01118 Semialdehyde dehydrogenase, NAD binding domain RPIT_RS01650 PF02774 Semialdehyde dehydrogenase, dimerisation domain RPIT_RS01655 PF03807 NADP oxidoreductase coenzyme F420-dependent RPIT_RS01655 PF14748 Pyrroline-5-carboxylate reductase dimerisation RPIT_RS01670 PF10414 Sirohaem synthase dimerisation region RPIT_RS01670 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RPIT_RS01670 PF14824 Sirohaem biosynthesis protein central RPIT_RS01675 PF00300 Histidine phosphatase superfamily (branch 1) RPIT_RS01680 PF08534 Redoxin RPIT_RS01685 PF02683 Cytochrome C biogenesis protein transmembrane region RPIT_RS01690 PF05140 ResB-like family RPIT_RS01695 PF01578 Cytochrome C assembly protein RPIT_RS01710 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RPIT_RS01710 PF07992 Pyridine nucleotide-disulphide oxidoreductase RPIT_RS01715 PF00933 Glycosyl hydrolase family 3 N terminal domain RPIT_RS01725 PF00005 ABC transporter RPIT_RS01730 PF00528 Binding-protein-dependent transport system inner membrane component RPIT_RS01735 PF00528 Binding-protein-dependent transport system inner membrane component RPIT_RS01740 PF12849 PBP superfamily domain RPIT_RS01745 PF00300 Histidine phosphatase superfamily (branch 1) RPIT_RS01745 PF00293 NUDIX domain RPIT_RS01750 PF17941 Polyphosphate kinase C-terminal domain 1 RPIT_RS01750 PF13089 Polyphosphate kinase N-terminal domain RPIT_RS01750 PF02503 Polyphosphate kinase middle domain RPIT_RS01750 PF13090 Polyphosphate kinase C-terminal domain 2 RPIT_RS01755 PF00583 Acetyltransferase (GNAT) family RPIT_RS01755 PF13673 Acetyltransferase (GNAT) domain RPIT_RS01760 PF00486 Transcriptional regulatory protein, C terminal RPIT_RS01770 PF02580 D-Tyr-tRNA(Tyr) deacylase RPIT_RS01775 PF08768 Domain of unknown function (DUF1794) RPIT_RS01780 PF01571 Aminomethyltransferase folate-binding domain RPIT_RS01785 PF08534 Redoxin RPIT_RS01790 PF03976 Polyphosphate kinase 2 (PPK2) RPIT_RS01815 PF03144 Elongation factor Tu domain 2 RPIT_RS01815 PF00009 Elongation factor Tu GTP binding domain RPIT_RS01815 PF00679 Elongation factor G C-terminus RPIT_RS01815 PF14492 Elongation Factor G, domain II RPIT_RS01830 PF03610 PTS system fructose IIA component RPIT_RS01830 PF05524 PEP-utilising enzyme, N-terminal RPIT_RS01830 PF00381 PTS HPr component phosphorylation site RPIT_RS01830 PF00391 PEP-utilising enzyme, mobile domain RPIT_RS01835 PF02734 DAK2 domain RPIT_RS01840 PF02733 Dak1 domain RPIT_RS01845 PF00709 Adenylosuccinate synthetase RPIT_RS01860 PF00528 Binding-protein-dependent transport system inner membrane component RPIT_RS01865 PF00528 Binding-protein-dependent transport system inner membrane component RPIT_RS01870 PF01547 Bacterial extracellular solute-binding protein RPIT_RS01875 PF02843 Phosphoribosylglycinamide synthetase, C domain RPIT_RS01875 PF02844 Phosphoribosylglycinamide synthetase, N domain RPIT_RS01875 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain RPIT_RS01880 PF02371 Transposase IS116/IS110/IS902 family RPIT_RS01880 PF01548 Transposase RPIT_RS01895 PF00108 Thiolase, N-terminal domain RPIT_RS01895 PF02803 Thiolase, C-terminal domain RPIT_RS01915 PF10397 Adenylosuccinate lyase C-terminus RPIT_RS01915 PF00206 Lyase RPIT_RS01920 PF13193 AMP-binding enzyme C-terminal domain RPIT_RS01920 PF00501 AMP-binding enzyme RPIT_RS01945 PF01259 SAICAR synthetase RPIT_RS01955 PF02245 Methylpurine-DNA glycosylase (MPG) RPIT_RS01960 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase RPIT_RS01975 PF01433 Peptidase family M1 domain RPIT_RS01975 PF11838 ERAP1-like C-terminal domain RPIT_RS01980 PF13860 FlgD Ig-like domain RPIT_RS01980 PF05922 Peptidase inhibitor I9 RPIT_RS01980 PF02225 PA domain RPIT_RS01980 PF00082 Subtilase family RPIT_RS01985 PF00586 AIR synthase related protein, N-terminal domain RPIT_RS01985 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain RPIT_RS01985 PF02769 AIR synthase related protein, C-terminal domain RPIT_RS01990 PF01548 Transposase RPIT_RS01990 PF02371 Transposase IS116/IS110/IS902 family RPIT_RS02005 PF01546 Peptidase family M20/M25/M40 RPIT_RS02005 PF07687 Peptidase dimerisation domain RPIT_RS02020 PF00206 Lyase RPIT_RS02020 PF10415 Fumarase C C-terminus RPIT_RS02025 PF03060 Nitronate monooxygenase RPIT_RS02030 PF00381 PTS HPr component phosphorylation site RPIT_RS02035 PF00391 PEP-utilising enzyme, mobile domain RPIT_RS02035 PF05524 PEP-utilising enzyme, N-terminal RPIT_RS02035 PF02896 PEP-utilising enzyme, TIM barrel domain RPIT_RS02040 PF00128 Alpha amylase, catalytic domain RPIT_RS02045 PF00356 Bacterial regulatory proteins, lacI family RPIT_RS02060 PF14785 Maltose transport system permease protein MalF P2 domain RPIT_RS02060 PF00528 Binding-protein-dependent transport system inner membrane component RPIT_RS02065 PF00528 Binding-protein-dependent transport system inner membrane component RPIT_RS02070 PF00877 NlpC/P60 family RPIT_RS02080 PF03109 ABC1 family RPIT_RS02085 PF04055 Radical SAM superfamily RPIT_RS02085 PF06463 Molybdenum Cofactor Synthesis C RPIT_RS02100 PF00384 Molybdopterin oxidoreductase RPIT_RS02100 PF01568 Molydopterin dinucleotide binding domain RPIT_RS02105 PF14711 Respiratory nitrate reductase beta C-terminal RPIT_RS02105 PF13247 4Fe-4S dicluster domain RPIT_RS02110 PF00384 Molybdopterin oxidoreductase RPIT_RS02110 PF02613 Nitrate reductase delta subunit RPIT_RS02110 PF02665 Nitrate reductase gamma subunit RPIT_RS02115 PF02613 Nitrate reductase delta subunit RPIT_RS02115 PF02665 Nitrate reductase gamma subunit RPIT_RS02115 PF00384 Molybdopterin oxidoreductase RPIT_RS02120 PF07690 Major Facilitator Superfamily RPIT_RS02125 PF07690 Major Facilitator Superfamily RPIT_RS02130 PF02391 MoaE protein RPIT_RS02135 PF00899 ThiF family RPIT_RS02135 PF00581 Rhodanese-like domain RPIT_RS02140 PF03453 MoeA N-terminal region (domain I and II) RPIT_RS02140 PF03454 MoeA C-terminal region (domain IV) RPIT_RS02140 PF00994 Probable molybdopterin binding domain RPIT_RS02255 PF01695 IstB-like ATP binding protein RPIT_RS02265 PF00005 ABC transporter RPIT_RS02265 PF13732 Domain of unknown function (DUF4162) RPIT_RS02290 PF01967 MoaC family RPIT_RS02295 PF00994 Probable molybdopterin binding domain RPIT_RS02300 PF00005 ABC transporter RPIT_RS02305 PF12704 MacB-like periplasmic core domain RPIT_RS02305 PF02687 FtsX-like permease family RPIT_RS02305 PF00005 ABC transporter RPIT_RS02330 PF00156 Phosphoribosyl transferase domain RPIT_RS02335 PF02769 AIR synthase related protein, C-terminal domain RPIT_RS02335 PF00586 AIR synthase related protein, N-terminal domain RPIT_RS02350 PF01047 MarR family RPIT_RS02355 PF05977 Transmembrane secretion effector RPIT_RS02360 PF03971 Monomeric isocitrate dehydrogenase RPIT_RS02375 PF03264 NapC/NirT cytochrome c family, N-terminal region RPIT_RS02380 PF02335 Cytochrome c552 RPIT_RS02395 PF01578 Cytochrome C assembly protein RPIT_RS02425 PF03553 Na+/H+ antiporter family RPIT_RS02425 PF13726 Na+-H+ antiporter family RPIT_RS02435 PF00118 TCP-1/cpn60 chaperonin family RPIT_RS02460 PF00128 Alpha amylase, catalytic domain RPIT_RS02465 PF00128 Alpha amylase, catalytic domain RPIT_RS02475 PF00128 Alpha amylase, catalytic domain RPIT_RS02485 PF02092 Glycyl-tRNA synthetase beta subunit RPIT_RS02485 PF02091 Glycyl-tRNA synthetase alpha subunit RPIT_RS02485 PF05746 DALR anticodon binding domain RPIT_RS02490 PF01545 Cation efflux family RPIT_RS02490 PF16916 Dimerisation domain of Zinc Transporter RPIT_RS02495 PF08544 GHMP kinases C terminal RPIT_RS02495 PF00288 GHMP kinases N terminal domain RPIT_RS02495 PF10509 Galactokinase galactose-binding signature RPIT_RS02500 PF00132 Bacterial transferase hexapeptide (six repeats) RPIT_RS02500 PF12804 MobA-like NTP transferase domain RPIT_RS02505 PF02734 DAK2 domain RPIT_RS02520 PF01040 UbiA prenyltransferase family RPIT_RS02525 PF13378 Enolase C-terminal domain-like RPIT_RS02525 PF18374 Enolase N-terminal domain-like RPIT_RS02530 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RPIT_RS02540 PF01209 ubiE/COQ5 methyltransferase family RPIT_RS02555 PF00005 ABC transporter RPIT_RS02555 PF09383 NIL domain RPIT_RS02565 PF00425 chorismate binding enzyme RPIT_RS02570 PF01494 FAD binding domain RPIT_RS02575 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 RPIT_RS02580 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit RPIT_RS02585 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit RPIT_RS02590 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit RPIT_RS02600 PF10531 SLBB domain RPIT_RS02600 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region RPIT_RS02600 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit RPIT_RS02605 PF01568 Molydopterin dinucleotide binding domain RPIT_RS02605 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region RPIT_RS02605 PF00384 Molybdopterin oxidoreductase RPIT_RS02610 PF00146 NADH dehydrogenase RPIT_RS02615 PF12838 4Fe-4S dicluster domain RPIT_RS02620 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 RPIT_RS02625 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L RPIT_RS02630 PF00361 Proton-conducting membrane transporter RPIT_RS02630 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus RPIT_RS02635 PF00361 Proton-conducting membrane transporter RPIT_RS02640 PF00361 Proton-conducting membrane transporter RPIT_RS02645 PF00348 Polyprenyl synthetase RPIT_RS02650 PF05649 Peptidase family M13 RPIT_RS02650 PF01431 Peptidase family M13 RPIT_RS02655 PF03631 Virulence factor BrkB RPIT_RS02660 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RPIT_RS02665 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg RPIT_RS02665 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II RPIT_RS02665 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase RPIT_RS02675 PF00176 SNF2 family N-terminal domain RPIT_RS02675 PF00271 Helicase conserved C-terminal domain RPIT_RS02675 PF12419 SNF2 Helicase protein RPIT_RS02685 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit RPIT_RS02690 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit RPIT_RS02695 PF00037 4Fe-4S binding domain RPIT_RS02710 PF00561 alpha/beta hydrolase fold RPIT_RS02715 PF04461 Protein of unknown function (DUF520) RPIT_RS02730 PF01048 Phosphorylase superfamily RPIT_RS02745 PF00471 Ribosomal protein L33 RPIT_RS02750 PF13452 N-terminal half of MaoC dehydratase RPIT_RS02760 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain RPIT_RS02760 PF01565 FAD binding domain RPIT_RS02770 PF07687 Peptidase dimerisation domain RPIT_RS02770 PF01546 Peptidase family M20/M25/M40 RPIT_RS02780 PF00664 ABC transporter transmembrane region RPIT_RS02780 PF00005 ABC transporter RPIT_RS02785 PF00664 ABC transporter transmembrane region RPIT_RS02785 PF00005 ABC transporter RPIT_RS02795 PF00584 SecE/Sec61-gamma subunits of protein translocation complex RPIT_RS02800 PF02357 Transcription termination factor nusG RPIT_RS02805 PF00298 Ribosomal protein L11, RNA binding domain RPIT_RS02805 PF03946 Ribosomal protein L11, N-terminal domain RPIT_RS02810 PF00687 Ribosomal protein L1p/L10e family RPIT_RS02815 PF01470 Pyroglutamyl peptidase RPIT_RS02820 PF00378 Enoyl-CoA hydratase/isomerase RPIT_RS02825 PF00300 Histidine phosphatase superfamily (branch 1) RPIT_RS02825 PF13456 Reverse transcriptase-like RPIT_RS02830 PF01256 Carbohydrate kinase RPIT_RS02835 PF00005 ABC transporter RPIT_RS02840 PF00528 Binding-protein-dependent transport system inner membrane component RPIT_RS02850 PF00466 Ribosomal protein L10 RPIT_RS02855 PF00542 Ribosomal protein L7/L12 C-terminal domain RPIT_RS02855 PF16320 Ribosomal protein L7/L12 dimerisation domain RPIT_RS02860 PF04560 RNA polymerase Rpb2, domain 7 RPIT_RS02860 PF00562 RNA polymerase Rpb2, domain 6 RPIT_RS02860 PF04565 RNA polymerase Rpb2, domain 3 RPIT_RS02860 PF04561 RNA polymerase Rpb2, domain 2 RPIT_RS02860 PF04563 RNA polymerase beta subunit RPIT_RS02860 PF10385 RNA polymerase beta subunit external 1 domain RPIT_RS02865 PF04983 RNA polymerase Rpb1, domain 3 RPIT_RS02865 PF05000 RNA polymerase Rpb1, domain 4 RPIT_RS02865 PF04997 RNA polymerase Rpb1, domain 1 RPIT_RS02865 PF00623 RNA polymerase Rpb1, domain 2 RPIT_RS02865 PF04998 RNA polymerase Rpb1, domain 5 RPIT_RS02870 PF02653 Branched-chain amino acid transport system / permease component RPIT_RS02875 PF00005 ABC transporter RPIT_RS02880 PF13407 Periplasmic binding protein domain RPIT_RS02885 PF00480 ROK family RPIT_RS02890 PF00933 Glycosyl hydrolase family 3 N terminal domain RPIT_RS02895 PF00164 Ribosomal protein S12/S23 RPIT_RS02900 PF00177 Ribosomal protein S7p/S5e RPIT_RS02905 PF03144 Elongation factor Tu domain 2 RPIT_RS02905 PF00009 Elongation factor Tu GTP binding domain RPIT_RS02905 PF14492 Elongation Factor G, domain II RPIT_RS02905 PF00679 Elongation factor G C-terminus RPIT_RS02905 PF03764 Elongation factor G, domain IV RPIT_RS02910 PF01228 Glycine radical RPIT_RS02910 PF02901 Pyruvate formate lyase-like RPIT_RS02915 PF04055 Radical SAM superfamily RPIT_RS02930 PF03143 Elongation factor Tu C-terminal domain RPIT_RS02930 PF03144 Elongation factor Tu domain 2 RPIT_RS02930 PF00009 Elongation factor Tu GTP binding domain RPIT_RS02940 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain RPIT_RS02940 PF00749 tRNA synthetases class I (E and Q), catalytic domain RPIT_RS02950 PF00749 tRNA synthetases class I (E and Q), catalytic domain RPIT_RS02955 PF13409 Glutathione S-transferase, N-terminal domain RPIT_RS02965 PF04851 Type III restriction enzyme, res subunit RPIT_RS02975 PF00478 IMP dehydrogenase / GMP reductase domain RPIT_RS02975 PF00571 CBS domain RPIT_RS02980 PF02837 Glycosyl hydrolases family 2, sugar binding domain RPIT_RS02980 PF02836 Glycosyl hydrolases family 2, TIM barrel domain RPIT_RS02980 PF02929 Beta galactosidase small chain RPIT_RS02980 PF16353 Domain of unknown function(DUF4981) RPIT_RS02985 PF00338 Ribosomal protein S10p/S20e RPIT_RS02990 PF00297 Ribosomal protein L3 RPIT_RS02995 PF00573 Ribosomal protein L4/L1 family RPIT_RS03000 PF00276 Ribosomal protein L23 RPIT_RS03005 PF03947 Ribosomal Proteins L2, C-terminal domain RPIT_RS03005 PF00181 Ribosomal Proteins L2, RNA binding domain RPIT_RS03010 PF00203 Ribosomal protein S19 RPIT_RS03015 PF00237 Ribosomal protein L22p/L17e RPIT_RS03020 PF00189 Ribosomal protein S3, C-terminal domain RPIT_RS03020 PF07650 KH domain RPIT_RS03025 PF00252 Ribosomal protein L16p/L10e RPIT_RS03030 PF00831 Ribosomal L29 protein RPIT_RS03035 PF00366 Ribosomal protein S17 RPIT_RS03050 PF01925 Sulfite exporter TauE/SafE RPIT_RS03060 PF00581 Rhodanese-like domain RPIT_RS03060 PF00899 ThiF family RPIT_RS03065 PF00291 Pyridoxal-phosphate dependent enzyme RPIT_RS03075 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain RPIT_RS03075 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain RPIT_RS03080 PF01370 NAD dependent epimerase/dehydratase family RPIT_RS03085 PF12300 ATP-dependent RNA helicase RhlB RPIT_RS03085 PF00271 Helicase conserved C-terminal domain RPIT_RS03085 PF00270 DEAD/DEAH box helicase RPIT_RS03090 PF00238 Ribosomal protein L14p/L23e RPIT_RS03095 PF00467 KOW motif RPIT_RS03095 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 RPIT_RS03100 PF00673 ribosomal L5P family C-terminus RPIT_RS03100 PF00281 Ribosomal protein L5 RPIT_RS03105 PF00253 Ribosomal protein S14p/S29e RPIT_RS03110 PF00410 Ribosomal protein S8 RPIT_RS03115 PF00347 Ribosomal protein L6 RPIT_RS03120 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast RPIT_RS03125 PF00333 Ribosomal protein S5, N-terminal domain RPIT_RS03125 PF03719 Ribosomal protein S5, C-terminal domain RPIT_RS03130 PF00327 Ribosomal protein L30p/L7e RPIT_RS03135 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A RPIT_RS03140 PF00344 SecY translocase RPIT_RS03150 PF00557 Metallopeptidase family M24 RPIT_RS03175 PF00923 Transaldolase/Fructose-6-phosphate aldolase RPIT_RS03180 PF04962 KduI/IolB family RPIT_RS03185 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RPIT_RS03185 PF00205 Thiamine pyrophosphate enzyme, central domain RPIT_RS03185 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RPIT_RS03195 PF00294 pfkB family carbohydrate kinase RPIT_RS03200 PF00528 Binding-protein-dependent transport system inner membrane component RPIT_RS03205 PF00528 Binding-protein-dependent transport system inner membrane component RPIT_RS03220 PF11975 Family 4 glycosyl hydrolase C-terminal domain RPIT_RS03220 PF02056 Family 4 glycosyl hydrolase RPIT_RS03230 PF13823 Alcohol dehydrogenase GroES-associated RPIT_RS03230 PF00107 Zinc-binding dehydrogenase RPIT_RS03230 PF08240 Alcohol dehydrogenase GroES-like domain RPIT_RS03235 PF00171 Aldehyde dehydrogenase family RPIT_RS03240 PF02653 Branched-chain amino acid transport system / permease component RPIT_RS03245 PF00005 ABC transporter RPIT_RS03250 PF13407 Periplasmic binding protein domain RPIT_RS03255 PF01261 Xylose isomerase-like TIM barrel RPIT_RS03260 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RPIT_RS03260 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RPIT_RS03265 PF01261 Xylose isomerase-like TIM barrel RPIT_RS03270 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RPIT_RS03270 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RPIT_RS03280 PF08240 Alcohol dehydrogenase GroES-like domain RPIT_RS03280 PF00107 Zinc-binding dehydrogenase RPIT_RS03285 PF00873 AcrB/AcrD/AcrF family RPIT_RS03290 PF00873 AcrB/AcrD/AcrF family RPIT_RS03295 PF01176 Translation initiation factor 1A / IF-1 RPIT_RS03300 PF00444 Ribosomal protein L36 RPIT_RS03305 PF00416 Ribosomal protein S13/S18 RPIT_RS03310 PF00411 Ribosomal protein S11 RPIT_RS03320 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain RPIT_RS03320 PF01000 RNA polymerase Rpb3/RpoA insert domain RPIT_RS03320 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain RPIT_RS03325 PF01196 Ribosomal protein L17 RPIT_RS03340 PF02653 Branched-chain amino acid transport system / permease component RPIT_RS03345 PF00005 ABC transporter RPIT_RS03345 PF08402 TOBE domain RPIT_RS03350 PF00534 Glycosyl transferases group 1 RPIT_RS03350 PF13579 Glycosyl transferase 4-like domain RPIT_RS03360 PF01757 Acyltransferase family RPIT_RS03365 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain RPIT_RS03365 PF02777 Iron/manganese superoxide dismutases, C-terminal domain RPIT_RS03370 PF08468 Methyltransferase small domain N-terminal RPIT_RS03370 PF05175 Methyltransferase small domain RPIT_RS03375 PF01416 tRNA pseudouridine synthase RPIT_RS03380 PF02390 Putative methyltransferase RPIT_RS03385 PF03733 Inner membrane component domain RPIT_RS03390 PF03144 Elongation factor Tu domain 2 RPIT_RS03390 PF00009 Elongation factor Tu GTP binding domain RPIT_RS03390 PF03764 Elongation factor G, domain IV RPIT_RS03390 PF00679 Elongation factor G C-terminus RPIT_RS03390 PF14492 Elongation Factor G, domain II RPIT_RS03395 PF00572 Ribosomal protein L13 RPIT_RS03400 PF00380 Ribosomal protein S9/S16 RPIT_RS03405 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II RPIT_RS03405 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III RPIT_RS03405 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I RPIT_RS03405 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain RPIT_RS03415 PF00773 RNB domain RPIT_RS03415 PF00575 S1 RNA binding domain RPIT_RS03425 PF14403 Circularly permuted ATP-grasp type 2 RPIT_RS03425 PF04168 A predicted alpha-helical domain with a conserved ER motif. RPIT_RS03430 PF01841 Transglutaminase-like superfamily RPIT_RS03430 PF08379 Bacterial transglutaminase-like N-terminal region RPIT_RS03435 PF01841 Transglutaminase-like superfamily RPIT_RS03435 PF08379 Bacterial transglutaminase-like N-terminal region RPIT_RS03440 PF00557 Metallopeptidase family M24 RPIT_RS03450 PF00120 Glutamine synthetase, catalytic domain RPIT_RS03450 PF03951 Glutamine synthetase, beta-Grasp domain RPIT_RS03460 PF03710 Glutamate-ammonia ligase adenylyltransferase RPIT_RS03460 PF08335 GlnD PII-uridylyltransferase RPIT_RS03465 PF00528 Binding-protein-dependent transport system inner membrane component RPIT_RS03470 PF09084 NMT1/THI5 like RPIT_RS03485 PF03176 MMPL family RPIT_RS03490 PF00120 Glutamine synthetase, catalytic domain RPIT_RS03490 PF03951 Glutamine synthetase, beta-Grasp domain RPIT_RS03495 PF00375 Sodium:dicarboxylate symporter family RPIT_RS03505 PF00005 ABC transporter RPIT_RS03505 PF12848 ABC transporter RPIT_RS03505 PF16326 ABC transporter C-terminal domain RPIT_RS03520 PF03099 Biotin/lipoate A/B protein ligase family RPIT_RS03530 PF02817 e3 binding domain RPIT_RS03530 PF00364 Biotin-requiring enzyme RPIT_RS03530 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) RPIT_RS03535 PF07992 Pyridine nucleotide-disulphide oxidoreductase RPIT_RS03535 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RPIT_RS03545 PF02789 Cytosol aminopeptidase family, N-terminal domain RPIT_RS03545 PF00883 Cytosol aminopeptidase family, catalytic domain RPIT_RS03575 PF02595 Glycerate kinase family RPIT_RS03580 PF01521 Iron-sulphur cluster biosynthesis RPIT_RS03585 PF00116 Cytochrome C oxidase subunit II, periplasmic domain RPIT_RS03590 PF00115 Cytochrome C and Quinol oxidase polypeptide I RPIT_RS03605 PF01695 IstB-like ATP binding protein RPIT_RS03635 PF03552 Cellulose synthase RPIT_RS03635 PF07238 PilZ domain RPIT_RS03635 PF00535 Glycosyl transferase family 2 RPIT_RS03640 PF13732 Domain of unknown function (DUF4162) RPIT_RS03640 PF00005 ABC transporter RPIT_RS03645 PF05726 Pirin C-terminal cupin domain RPIT_RS03645 PF02678 Pirin RPIT_RS03650 PF00571 CBS domain RPIT_RS03650 PF00478 IMP dehydrogenase / GMP reductase domain RPIT_RS03655 PF13631 Cytochrome b(N-terminal)/b6/petB RPIT_RS03660 PF00355 Rieske [2Fe-2S] domain RPIT_RS03665 PF00034 Cytochrome c RPIT_RS03665 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RPIT_RS03670 PF00510 Cytochrome c oxidase subunit III RPIT_RS03685 PF02885 Glycosyl transferase family, helical bundle domain RPIT_RS03685 PF00591 Glycosyl transferase family, a/b domain RPIT_RS03695 PF06224 Winged helix DNA-binding domain RPIT_RS03700 PF00573 Ribosomal protein L4/L1 family RPIT_RS03710 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD RPIT_RS03715 PF00929 Exonuclease RPIT_RS03715 PF01541 GIY-YIG catalytic domain RPIT_RS03720 PF00877 NlpC/P60 family RPIT_RS03740 PF00072 Response regulator receiver domain RPIT_RS03740 PF00196 Bacterial regulatory proteins, luxR family RPIT_RS03745 PF01474 Class-II DAHP synthetase family RPIT_RS03760 PF00069 Protein kinase domain RPIT_RS03760 PF03793 PASTA domain RPIT_RS03765 PF02581 Thiamine monophosphate synthase RPIT_RS03775 PF00348 Polyprenyl synthetase RPIT_RS03780 PF02219 Methylenetetrahydrofolate reductase RPIT_RS03790 PF13538 UvrD-like helicase C-terminal domain RPIT_RS03795 PF06965 Na+/H+ antiporter 1 RPIT_RS03795 PF13462 Thioredoxin RPIT_RS03820 PF00005 ABC transporter RPIT_RS03825 PF00005 ABC transporter RPIT_RS03825 PF02687 FtsX-like permease family RPIT_RS03825 PF12704 MacB-like periplasmic core domain RPIT_RS03840 PF02371 Transposase IS116/IS110/IS902 family RPIT_RS03840 PF01548 Transposase RPIT_RS03845 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain RPIT_RS03845 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain RPIT_RS03845 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain RPIT_RS03860 PF00664 ABC transporter transmembrane region RPIT_RS03860 PF00005 ABC transporter RPIT_RS03870 PF00534 Glycosyl transferases group 1 RPIT_RS03870 PF13439 Glycosyltransferase Family 4 RPIT_RS03900 PF07733 Bacterial DNA polymerase III alpha NTPase domain RPIT_RS03900 PF17657 Bacterial DNA polymerase III alpha subunit finger domain RPIT_RS03900 PF14579 Helix-hairpin-helix motif RPIT_RS03900 PF02811 PHP domain RPIT_RS03905 PF00817 impB/mucB/samB family RPIT_RS03905 PF11799 impB/mucB/samB family C-terminal domain RPIT_RS03930 PF07726 ATPase family associated with various cellular activities (AAA) RPIT_RS03930 PF17863 AAA lid domain RPIT_RS03935 PF02381 MraZ protein, putative antitoxin-like RPIT_RS03940 PF01795 MraW methylase family RPIT_RS03950 PF03717 Penicillin-binding Protein dimerisation domain RPIT_RS03950 PF00905 Penicillin binding protein transpeptidase domain RPIT_RS03955 PF08245 Mur ligase middle domain RPIT_RS03955 PF02875 Mur ligase family, glutamate ligase domain RPIT_RS03955 PF01225 Mur ligase family, catalytic domain RPIT_RS03960 PF08245 Mur ligase middle domain RPIT_RS03960 PF01225 Mur ligase family, catalytic domain RPIT_RS03960 PF02875 Mur ligase family, glutamate ligase domain RPIT_RS03965 PF00953 Glycosyl transferase family 4 RPIT_RS03965 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 RPIT_RS03970 PF08245 Mur ligase middle domain RPIT_RS03970 PF02875 Mur ligase family, glutamate ligase domain RPIT_RS03975 PF01098 Cell cycle protein RPIT_RS03980 PF03033 Glycosyltransferase family 28 N-terminal domain RPIT_RS03980 PF04101 Glycosyltransferase family 28 C-terminal domain RPIT_RS03985 PF08245 Mur ligase middle domain RPIT_RS03985 PF02875 Mur ligase family, glutamate ligase domain RPIT_RS03985 PF01225 Mur ligase family, catalytic domain RPIT_RS03990 PF03799 Cell division protein FtsQ RPIT_RS03990 PF08478 POTRA domain, FtsQ-type RPIT_RS03995 PF12327 FtsZ family, C-terminal domain RPIT_RS03995 PF00091 Tubulin/FtsZ family, GTPase domain RPIT_RS04000 PF04472 Cell division protein SepF RPIT_RS04020 PF01252 Signal peptidase (SPase) II RPIT_RS04025 PF00849 RNA pseudouridylate synthase RPIT_RS04030 PF00224 Pyruvate kinase, barrel domain RPIT_RS04030 PF02887 Pyruvate kinase, alpha/beta domain RPIT_RS04040 PF03861 ANTAR domain RPIT_RS04040 PF00072 Response regulator receiver domain RPIT_RS04045 PF03061 Thioesterase superfamily RPIT_RS04050 PF01367 5'-3' exonuclease, C-terminal SAM fold RPIT_RS04050 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain RPIT_RS04050 PF00476 DNA polymerase family A RPIT_RS04070 PF00575 S1 RNA binding domain RPIT_RS04075 PF01121 Dephospho-CoA kinase RPIT_RS04080 PF02347 Glycine cleavage system P-protein RPIT_RS04085 PF01597 Glycine cleavage H-protein RPIT_RS04090 PF01571 Aminomethyltransferase folate-binding domain RPIT_RS04090 PF08669 Glycine cleavage T-protein C-terminal barrel domain RPIT_RS04105 PF12344 Ultra-violet resistance protein B RPIT_RS04105 PF04851 Type III restriction enzyme, res subunit RPIT_RS04105 PF00271 Helicase conserved C-terminal domain RPIT_RS04105 PF02151 UvrB/uvrC motif RPIT_RS04105 PF17757 UvrB interaction domain RPIT_RS04115 PF17755 UvrA DNA-binding domain RPIT_RS04115 PF17760 UvrA interaction domain RPIT_RS04115 PF00005 ABC transporter RPIT_RS04125 PF08459 UvrC Helix-hairpin-helix N-terminal RPIT_RS04125 PF01541 GIY-YIG catalytic domain RPIT_RS04125 PF02151 UvrB/uvrC motif RPIT_RS04130 PF02632 BioY family RPIT_RS04135 PF00005 ABC transporter RPIT_RS04140 PF02361 Cobalt transport protein RPIT_RS04145 PF03668 P-loop ATPase protein family RPIT_RS04150 PF01933 Uncharacterised protein family UPF0052 RPIT_RS04155 PF10298 WhiA N-terminal LAGLIDADG-like domain RPIT_RS04155 PF02650 WhiA C-terminal HTH domain RPIT_RS04155 PF14527 WhiA LAGLIDADG-like domain RPIT_RS04160 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain RPIT_RS04160 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain RPIT_RS04165 PF00162 Phosphoglycerate kinase RPIT_RS04170 PF00121 Triosephosphate isomerase RPIT_RS04180 PF00528 Binding-protein-dependent transport system inner membrane component RPIT_RS04185 PF00528 Binding-protein-dependent transport system inner membrane component RPIT_RS04195 PF00005 ABC transporter RPIT_RS04200 PF03840 Preprotein translocase SecG subunit RPIT_RS04210 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase RPIT_RS04220 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain RPIT_RS04220 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain RPIT_RS04250 PF01040 UbiA prenyltransferase family RPIT_RS04260 PF04978 Protein of unknown function (DUF664) RPIT_RS04265 PF01432 Peptidase family M3 RPIT_RS04270 PF02628 Cytochrome oxidase assembly protein RPIT_RS04280 PF00005 ABC transporter RPIT_RS04280 PF13732 Domain of unknown function (DUF4162) RPIT_RS04290 PF01458 Uncharacterized protein family (UPF0051) RPIT_RS04295 PF01458 Uncharacterized protein family (UPF0051) RPIT_RS04305 PF00005 ABC transporter RPIT_RS04310 PF00266 Aminotransferase class-V RPIT_RS04315 PF01592 NifU-like N terminal domain RPIT_RS04320 PF01883 Iron-sulfur cluster assembly protein RPIT_RS04325 PF00561 alpha/beta hydrolase fold RPIT_RS04335 PF00196 Bacterial regulatory proteins, luxR family RPIT_RS04335 PF00072 Response regulator receiver domain RPIT_RS04345 PF00892 EamA-like transporter family RPIT_RS04350 PF16326 ABC transporter C-terminal domain RPIT_RS04350 PF00005 ABC transporter RPIT_RS04350 PF12848 ABC transporter RPIT_RS04355 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I RPIT_RS04355 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II RPIT_RS04355 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III RPIT_RS04355 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain RPIT_RS04360 PF00128 Alpha amylase, catalytic domain RPIT_RS04365 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 RPIT_RS04370 PF13649 Methyltransferase domain RPIT_RS04395 PF00005 ABC transporter RPIT_RS04405 PF01145 SPFH domain / Band 7 family RPIT_RS04410 PF13593 SBF-like CPA transporter family (DUF4137) RPIT_RS04415 PF04715 Anthranilate synthase component I, N terminal region RPIT_RS04415 PF00425 chorismate binding enzyme RPIT_RS04425 PF00588 SpoU rRNA Methylase family RPIT_RS04440 PF01327 Polypeptide deformylase RPIT_RS04445 PF00589 Phage integrase family RPIT_RS04445 PF02899 Phage integrase, N-terminal SAM-like domain RPIT_RS04450 PF10145 Phage-related minor tail protein RPIT_RS04450 PF01464 Transglycosylase SLT domain RPIT_RS04450 PF01551 Peptidase family M23 RPIT_RS04455 PF00318 Ribosomal protein S2 RPIT_RS04460 PF00889 Elongation factor TS RPIT_RS04465 PF00696 Amino acid kinase family RPIT_RS04470 PF01765 Ribosome recycling factor RPIT_RS04480 PF04055 Radical SAM superfamily RPIT_RS04485 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase RPIT_RS04485 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain RPIT_RS04490 PF01636 Phosphotransferase enzyme family RPIT_RS04495 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase RPIT_RS04495 PF13288 DXP reductoisomerase C-terminal domain RPIT_RS04495 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain RPIT_RS04500 PF17820 PDZ domain RPIT_RS04500 PF02163 Peptidase family M50 RPIT_RS04505 PF04551 GcpE protein RPIT_RS04510 PF00583 Acetyltransferase (GNAT) family RPIT_RS04515 PF04073 Aminoacyl-tRNA editing domain RPIT_RS04515 PF03129 Anticodon binding domain RPIT_RS04515 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RPIT_RS04530 PF17384 RimP C-terminal SH3 domain RPIT_RS04530 PF02576 RimP N-terminal domain RPIT_RS04535 PF13184 NusA-like KH domain RPIT_RS04535 PF08529 NusA N-terminal domain RPIT_RS04540 PF03990 G5-linked-Ubiquitin-like domain RPIT_RS04540 PF07501 G5 domain RPIT_RS04540 PF06737 Transglycosylase-like domain RPIT_RS04560 PF04760 Translation initiation factor IF-2, N-terminal region RPIT_RS04560 PF11987 Translation-initiation factor 2 RPIT_RS04560 PF00009 Elongation factor Tu GTP binding domain RPIT_RS04565 PF02033 Ribosome-binding factor A RPIT_RS04570 PF09142 tRNA Pseudouridine synthase II, C terminal RPIT_RS04570 PF16198 tRNA pseudouridylate synthase B C-terminal domain RPIT_RS04570 PF01509 TruB family pseudouridylate synthase (N terminal domain) RPIT_RS04575 PF01687 Riboflavin kinase RPIT_RS04575 PF06574 FAD synthetase RPIT_RS04590 PF00312 Ribosomal protein S15 RPIT_RS04595 PF18327 Proline utilization A proline dehydrogenase N-terminal domain RPIT_RS04595 PF14850 DNA-binding domain of Proline dehydrogenase RPIT_RS04595 PF01619 Proline dehydrogenase RPIT_RS04595 PF00171 Aldehyde dehydrogenase family RPIT_RS04600 PF00013 KH domain RPIT_RS04600 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain RPIT_RS04600 PF01138 3' exoribonuclease family, domain 1 RPIT_RS04600 PF00575 S1 RNA binding domain RPIT_RS04605 PF05173 Dihydrodipicolinate reductase, C-terminus RPIT_RS04605 PF01113 Dihydrodipicolinate reductase, N-terminus RPIT_RS04610 PF02028 BCCT, betaine/carnitine/choline family transporter RPIT_RS04620 PF17770 Ribonuclease J C-terminal domain RPIT_RS04620 PF12706 Beta-lactamase superfamily domain RPIT_RS04620 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain RPIT_RS04625 PF00829 Ribosomal prokaryotic L21 protein RPIT_RS04630 PF01016 Ribosomal L27 protein RPIT_RS04635 PF01926 50S ribosome-binding GTPase RPIT_RS04635 PF09269 Domain of unknown function (DUF1967) RPIT_RS04635 PF01018 GTP1/OBG RPIT_RS04640 PF01472 PUA domain RPIT_RS04640 PF00696 Amino acid kinase family RPIT_RS04650 PF00171 Aldehyde dehydrogenase family RPIT_RS04655 PF01467 Cytidylyltransferase-like RPIT_RS04665 PF00300 Histidine phosphatase superfamily (branch 1) RPIT_RS04675 PF01488 Shikimate / quinate 5-dehydrogenase RPIT_RS04675 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain RPIT_RS04675 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain RPIT_RS04680 PF01208 Uroporphyrinogen decarboxylase (URO-D) RPIT_RS04685 PF01593 Flavin containing amine oxidoreductase RPIT_RS04695 PF00490 Delta-aminolevulinic acid dehydratase RPIT_RS04700 PF00202 Aminotransferase class-III RPIT_RS04705 PF03900 Porphobilinogen deaminase, C-terminal domain RPIT_RS04705 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain RPIT_RS04715 PF00875 DNA photolyase RPIT_RS04715 PF03441 FAD binding domain of DNA photolyase RPIT_RS04720 PF01593 Flavin containing amine oxidoreductase RPIT_RS04730 PF12804 MobA-like NTP transferase domain RPIT_RS04740 PF01384 Phosphate transporter family RPIT_RS04755 PF01471 Putative peptidoglycan binding domain RPIT_RS04755 PF07486 Cell Wall Hydrolase RPIT_RS04775 PF00294 pfkB family carbohydrate kinase RPIT_RS04780 PF09334 tRNA synthetases class I (M) RPIT_RS04780 PF13603 Leucyl-tRNA synthetase, Domain 2 RPIT_RS04780 PF00133 tRNA synthetases class I (I, L, M and V) RPIT_RS04780 PF08264 Anticodon-binding domain of tRNA RPIT_RS04800 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RPIT_RS04800 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RPIT_RS04815 PF01649 Ribosomal protein S20 RPIT_RS04820 PF00009 Elongation factor Tu GTP binding domain RPIT_RS04820 PF03144 Elongation factor Tu domain 2 RPIT_RS04820 PF00679 Elongation factor G C-terminus RPIT_RS04820 PF06421 GTP-binding protein LepA C-terminus RPIT_RS04825 PF04408 Helicase associated domain (HA2) RPIT_RS04825 PF00270 DEAD/DEAH box helicase RPIT_RS04825 PF00271 Helicase conserved C-terminal domain RPIT_RS04825 PF08482 ATP-dependent helicase C-terminal RPIT_RS04835 PF04055 Radical SAM superfamily RPIT_RS04845 PF00392 Bacterial regulatory proteins, gntR family RPIT_RS04850 PF00005 ABC transporter RPIT_RS04865 PF00392 Bacterial regulatory proteins, gntR family RPIT_RS04910 PF00459 Inositol monophosphatase family RPIT_RS04915 PF00753 Metallo-beta-lactamase superfamily RPIT_RS04915 PF16123 Hydroxyacylglutathione hydrolase C-terminus RPIT_RS04920 PF08220 DeoR-like helix-turn-helix domain RPIT_RS04920 PF01628 HrcA protein C terminal domain RPIT_RS04925 PF00684 DnaJ central domain RPIT_RS04925 PF00226 DnaJ domain RPIT_RS04925 PF01556 DnaJ C terminal domain RPIT_RS04930 PF04452 RNA methyltransferase RPIT_RS04935 PF01702 Queuine tRNA-ribosyltransferase RPIT_RS04950 PF02562 PhoH-like protein RPIT_RS04955 PF02130 Uncharacterized protein family UPF0054 RPIT_RS04960 PF13520 Amino acid permease RPIT_RS04965 PF03471 Transporter associated domain RPIT_RS04965 PF01595 Cyclin M transmembrane N-terminal domain RPIT_RS04965 PF00571 CBS domain RPIT_RS04970 PF01926 50S ribosome-binding GTPase RPIT_RS04970 PF07650 KH domain RPIT_RS04980 PF00528 Binding-protein-dependent transport system inner membrane component RPIT_RS04985 PF00528 Binding-protein-dependent transport system inner membrane component RPIT_RS04990 PF08502 LeuA allosteric (dimerisation) domain RPIT_RS04990 PF00682 HMGL-like RPIT_RS04995 PF00271 Helicase conserved C-terminal domain RPIT_RS04995 PF08148 DSHCT (NUC185) domain RPIT_RS04995 PF00270 DEAD/DEAH box helicase RPIT_RS05005 PF01255 Putative undecaprenyl diphosphate synthase RPIT_RS05010 PF11967 Recombination protein O N terminal RPIT_RS05010 PF02565 Recombination protein O C terminal RPIT_RS05015 PF01475 Ferric uptake regulator family RPIT_RS05020 PF00950 ABC 3 transport family RPIT_RS05025 PF00005 ABC transporter RPIT_RS05030 PF01297 Zinc-uptake complex component A periplasmic RPIT_RS05040 PF01207 Dihydrouridine synthase (Dus) RPIT_RS05050 PF00285 Citrate synthase, C-terminal domain RPIT_RS05055 PF01966 HD domain RPIT_RS05055 PF13286 Phosphohydrolase-associated domain RPIT_RS05060 PF08275 DNA primase catalytic core, N-terminal domain RPIT_RS05060 PF10410 DnaB-helicase binding domain of primase RPIT_RS05060 PF08278 DNA primase DnaG DnaB-binding RPIT_RS05060 PF01807 CHC2 zinc finger RPIT_RS05060 PF13662 Toprim domain RPIT_RS05070 PF00474 Sodium:solute symporter family RPIT_RS05115 PF17863 AAA lid domain RPIT_RS05115 PF07726 ATPase family associated with various cellular activities (AAA) RPIT_RS05120 PF01882 Protein of unknown function DUF58 RPIT_RS05125 PF13519 von Willebrand factor type A domain RPIT_RS05125 PF07584 Aerotolerance regulator N-terminal RPIT_RS05130 PF07584 Aerotolerance regulator N-terminal RPIT_RS05130 PF13519 von Willebrand factor type A domain RPIT_RS05135 PF01168 Alanine racemase, N-terminal domain RPIT_RS05140 PF00326 Prolyl oligopeptidase family RPIT_RS05150 PF02801 Beta-ketoacyl synthase, C-terminal domain RPIT_RS05150 PF00109 Beta-ketoacyl synthase, N-terminal domain RPIT_RS05155 PF00550 Phosphopantetheine attachment site RPIT_RS05160 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal RPIT_RS05160 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III RPIT_RS05165 PF00698 Acyl transferase domain RPIT_RS05170 PF17853 GGDEF-like domain RPIT_RS05170 PF13556 PucR C-terminal helix-turn-helix domain RPIT_RS05175 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RPIT_RS05180 PF01235 Sodium:alanine symporter family RPIT_RS05190 PF14791 DNA polymerase beta thumb RPIT_RS05190 PF14716 Helix-hairpin-helix domain RPIT_RS05190 PF02811 PHP domain RPIT_RS05205 PF00456 Transketolase, thiamine diphosphate binding domain RPIT_RS05205 PF17831 Pyruvate dehydrogenase E1 component middle domain RPIT_RS05210 PF11253 Protein of unknown function (DUF3052) RPIT_RS05215 PF00365 Phosphofructokinase RPIT_RS05220 PF02371 Transposase IS116/IS110/IS902 family RPIT_RS05220 PF01548 Transposase RPIT_RS05240 PF09424 Yqey-like protein RPIT_RS05245 PF03462 PCRF domain RPIT_RS05245 PF00472 RF-1 domain RPIT_RS05250 PF00005 ABC transporter RPIT_RS05255 PF02687 FtsX-like permease family RPIT_RS05255 PF18075 FtsX extracellular domain RPIT_RS05260 PF10145 Phage-related minor tail protein RPIT_RS05260 PF01464 Transglycosylase SLT domain RPIT_RS05260 PF01551 Peptidase family M23 RPIT_RS05265 PF01668 SmpB protein RPIT_RS05280 PF02622 Uncharacterized ACR, COG1678 RPIT_RS05285 PF00486 Transcriptional regulatory protein, C terminal RPIT_RS05285 PF00072 Response regulator receiver domain RPIT_RS05290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPIT_RS05290 PF00512 His Kinase A (phospho-acceptor) domain RPIT_RS05290 PF00672 HAMP domain RPIT_RS05295 PF10647 Lipoprotein LpqB beta-propeller domain RPIT_RS05295 PF10646 Sporulation and spore germination RPIT_RS05300 PF00156 Phosphoribosyl transferase domain RPIT_RS05305 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus RPIT_RS05305 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein RPIT_RS05310 PF01043 SecA preprotein cross-linking domain RPIT_RS05310 PF07517 SecA DEAD-like domain RPIT_RS05310 PF07516 SecA Wing and Scaffold domain RPIT_RS05345 PF02735 Ku70/Ku80 beta-barrel domain RPIT_RS05360 PF02811 PHP domain RPIT_RS05365 PF00579 tRNA synthetases class I (W and Y) RPIT_RS05370 PF00270 DEAD/DEAH box helicase RPIT_RS05370 PF00271 Helicase conserved C-terminal domain RPIT_RS05385 PF04679 ATP dependent DNA ligase C terminal region RPIT_RS05385 PF01068 ATP dependent DNA ligase domain RPIT_RS05385 PF13298 DNA polymerase Ligase (LigD) RPIT_RS05390 PF00580 UvrD/REP helicase N-terminal domain RPIT_RS05390 PF13361 UvrD-like helicase C-terminal domain RPIT_RS05395 PF13361 UvrD-like helicase C-terminal domain RPIT_RS05395 PF00580 UvrD/REP helicase N-terminal domain RPIT_RS05400 PF09297 NADH pyrophosphatase zinc ribbon domain RPIT_RS05400 PF00293 NUDIX domain RPIT_RS05400 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain RPIT_RS05405 PF08281 Sigma-70, region 4 RPIT_RS05405 PF04542 Sigma-70 region 2 RPIT_RS05420 PF00204 DNA gyrase B RPIT_RS05420 PF00986 DNA gyrase B subunit, carboxyl terminus RPIT_RS05420 PF01751 Toprim domain RPIT_RS05420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPIT_RS05425 PF02589 LUD domain RPIT_RS05430 PF02589 LUD domain RPIT_RS05430 PF13183 4Fe-4S dicluster domain RPIT_RS05430 PF11870 Domain of unknown function (DUF3390) RPIT_RS05435 PF02754 Cysteine-rich domain RPIT_RS05440 PF02652 L-lactate permease RPIT_RS05445 PF07729 FCD domain RPIT_RS05445 PF00392 Bacterial regulatory proteins, gntR family RPIT_RS05470 PF00534 Glycosyl transferases group 1 RPIT_RS05470 PF13439 Glycosyltransferase Family 4 RPIT_RS05475 PF00265 Thymidine kinase RPIT_RS05485 PF11268 Protein of unknown function (DUF3071) RPIT_RS05505 PF00692 dUTPase RPIT_RS05525 PF02378 Phosphotransferase system, EIIC RPIT_RS05525 PF00367 phosphotransferase system, EIIB RPIT_RS05525 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 RPIT_RS05530 PF02896 PEP-utilising enzyme, TIM barrel domain RPIT_RS05530 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RPIT_RS05530 PF00381 PTS HPr component phosphorylation site RPIT_RS05530 PF00391 PEP-utilising enzyme, mobile domain RPIT_RS05530 PF05524 PEP-utilising enzyme, N-terminal RPIT_RS05540 PF00665 Integrase core domain RPIT_RS05540 PF13936 Helix-turn-helix domain RPIT_RS05545 PF02254 TrkA-N domain RPIT_RS05545 PF02080 TrkA-C domain RPIT_RS05550 PF02080 TrkA-C domain RPIT_RS05550 PF02254 TrkA-N domain RPIT_RS05555 PF13520 Amino acid permease RPIT_RS05560 PF05958 tRNA (Uracil-5-)-methyltransferase RPIT_RS05560 PF01938 TRAM domain RPIT_RS05565 PF00694 Aconitase C-terminal domain RPIT_RS05565 PF00330 Aconitase family (aconitate hydratase) RPIT_RS05575 PF13292 1-deoxy-D-xylulose-5-phosphate synthase RPIT_RS05575 PF02779 Transketolase, pyrimidine binding domain RPIT_RS05575 PF02780 Transketolase, C-terminal domain RPIT_RS05590 PF01641 SelR domain RPIT_RS05620 PF03458 UPF0126 domain RPIT_RS05625 PF00892 EamA-like transporter family RPIT_RS05630 PF01063 Amino-transferase class IV RPIT_RS05635 PF04073 Aminoacyl-tRNA editing domain RPIT_RS05645 PF03129 Anticodon binding domain RPIT_RS05645 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RPIT_RS05645 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain RPIT_RS05650 PF01230 HIT domain RPIT_RS05655 PF03279 Bacterial lipid A biosynthesis acyltransferase RPIT_RS05660 PF13439 Glycosyltransferase Family 4 RPIT_RS05665 PF01066 CDP-alcohol phosphatidyltransferase RPIT_RS05675 PF06947 Protein of unknown function (DUF1290) RPIT_RS05680 PF05949 Bacterial protein of unknown function (DUF881) RPIT_RS05685 PF16697 Inner membrane component of T3SS, cytoplasmic domain RPIT_RS05690 PF00376 MerR family regulatory protein RPIT_RS05695 PF02577 Bifunctional nuclease RPIT_RS05700 PF13411 MerR HTH family regulatory protein RPIT_RS05705 PF03631 Virulence factor BrkB RPIT_RS05710 PF00365 Phosphofructokinase RPIT_RS05720 PF00248 Aldo/keto reductase family RPIT_RS05725 PF01300 Telomere recombination RPIT_RS05745 PF07969 Amidohydrolase family RPIT_RS05770 PF01068 ATP dependent DNA ligase domain RPIT_RS05770 PF04679 ATP dependent DNA ligase C terminal region RPIT_RS05770 PF04675 DNA ligase N terminus RPIT_RS05775 PF00528 Binding-protein-dependent transport system inner membrane component RPIT_RS05780 PF00528 Binding-protein-dependent transport system inner membrane component RPIT_RS05805 PF07859 alpha/beta hydrolase fold RPIT_RS05825 PF00072 Response regulator receiver domain RPIT_RS05825 PF00196 Bacterial regulatory proteins, luxR family RPIT_RS05830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPIT_RS05830 PF07730 Histidine kinase RPIT_RS05830 PF00672 HAMP domain RPIT_RS05835 PF00005 ABC transporter RPIT_RS05845 PF13443 Cro/C1-type HTH DNA-binding domain RPIT_RS05855 PF08241 Methyltransferase domain RPIT_RS05860 PF01915 Glycosyl hydrolase family 3 C-terminal domain RPIT_RS05860 PF14310 Fibronectin type III-like domain RPIT_RS05860 PF00933 Glycosyl hydrolase family 3 N terminal domain RPIT_RS05870 PF02661 Fic/DOC family RPIT_RS05880 PF00561 alpha/beta hydrolase fold RPIT_RS05890 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 RPIT_RS05890 PF02378 Phosphotransferase system, EIIC RPIT_RS05890 PF00367 phosphotransferase system, EIIB RPIT_RS05900 PF07992 Pyridine nucleotide-disulphide oxidoreductase RPIT_RS05900 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RPIT_RS05905 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) RPIT_RS05910 PF08543 Phosphomethylpyrimidine kinase RPIT_RS05920 PF13397 RNA polymerase-binding protein RPIT_RS05925 PF04186 FxsA cytoplasmic membrane protein RPIT_RS05930 PF00535 Glycosyl transferase family 2 RPIT_RS05935 PF00795 Carbon-nitrogen hydrolase RPIT_RS05935 PF00535 Glycosyl transferase family 2 RPIT_RS05940 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain RPIT_RS05940 PF01367 5'-3' exonuclease, C-terminal SAM fold RPIT_RS05945 PF00561 alpha/beta hydrolase fold RPIT_RS05945 PF07021 Methionine biosynthesis protein MetW RPIT_RS05950 PF00561 alpha/beta hydrolase fold RPIT_RS05965 PF01053 Cys/Met metabolism PLP-dependent enzyme RPIT_RS05980 PF01268 Formate--tetrahydrofolate ligase RPIT_RS06000 PF02696 Uncharacterized ACR, YdiU/UPF0061 family RPIT_RS06025 PF02720 Domain of unknown function (DUF222) RPIT_RS06030 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal RPIT_RS06030 PF01926 50S ribosome-binding GTPase RPIT_RS06035 PF02224 Cytidylate kinase RPIT_RS06040 PF02153 Prephenate dehydrogenase RPIT_RS06050 PF08704 tRNA methyltransferase complex GCD14 subunit RPIT_RS06055 PF13419 Haloacid dehalogenase-like hydrolase RPIT_RS06060 PF02607 B12 binding domain RPIT_RS06060 PF02965 Vitamin B12 dependent methionine synthase, activation domain RPIT_RS06060 PF00809 Pterin binding enzyme RPIT_RS06060 PF02310 B12 binding domain RPIT_RS06060 PF02574 Homocysteine S-methyltransferase RPIT_RS06070 PF00834 Ribulose-phosphate 3 epimerase family RPIT_RS06075 PF01029 NusB family RPIT_RS06075 PF01189 16S rRNA methyltransferase RsmB/F RPIT_RS06080 PF02911 Formyl transferase, C-terminal domain RPIT_RS06080 PF00551 Formyl transferase RPIT_RS06085 PF17764 3′ DNA-binding domain (3′BD) RPIT_RS06090 PF02773 S-adenosylmethionine synthetase, C-terminal domain RPIT_RS06090 PF02772 S-adenosylmethionine synthetase, central domain RPIT_RS06090 PF00438 S-adenosylmethionine synthetase, N-terminal domain RPIT_RS06095 PF01192 RNA polymerase Rpb6 RPIT_RS06100 PF00625 Guanylate kinase RPIT_RS06110 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family RPIT_RS06115 PF01180 Dihydroorotate dehydrogenase RPIT_RS06120 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RPIT_RS06120 PF02142 MGS-like domain RPIT_RS06120 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain RPIT_RS06125 PF00117 Glutamine amidotransferase class-I RPIT_RS06125 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain RPIT_RS06130 PF01029 NusB family RPIT_RS06135 PF08207 Elongation factor P (EF-P) KOW-like domain RPIT_RS06135 PF09285 Elongation factor P, C-terminal RPIT_RS06135 PF01132 Elongation factor P (EF-P) OB domain RPIT_RS06140 PF02028 BCCT, betaine/carnitine/choline family transporter RPIT_RS06145 PF01761 3-dehydroquinate synthase RPIT_RS06150 PF01202 Shikimate kinase RPIT_RS06155 PF01264 Chorismate synthase RPIT_RS06160 PF18317 Shikimate 5'-dehydrogenase C-terminal domain RPIT_RS06160 PF08501 Shikimate dehydrogenase substrate binding domain RPIT_RS06170 PF03652 Holliday junction resolvase RPIT_RS06175 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain RPIT_RS06175 PF01411 tRNA synthetases class II (A) RPIT_RS06175 PF02272 DHHA1 domain RPIT_RS06190 PF16193 AAA C-terminal domain RPIT_RS06190 PF00004 ATPase family associated with various cellular activities (AAA) RPIT_RS06190 PF12002 MgsA AAA+ ATPase C terminal RPIT_RS06195 PF07690 Major Facilitator Superfamily RPIT_RS06200 PF01336 OB-fold nucleic acid binding domain RPIT_RS06200 PF00152 tRNA synthetases class II (D, K and N) RPIT_RS06200 PF02938 GAD domain RPIT_RS06215 PF13393 Histidyl-tRNA synthetase RPIT_RS06215 PF03129 Anticodon binding domain RPIT_RS06220 PF00753 Metallo-beta-lactamase superfamily RPIT_RS06230 PF03993 Domain of Unknown Function (DUF349) RPIT_RS06235 PF04607 Region found in RelA / SpoT proteins RPIT_RS06235 PF13291 ACT domain RPIT_RS06235 PF02824 TGS domain RPIT_RS06245 PF00156 Phosphoribosyl transferase domain RPIT_RS06250 PF07549 SecD/SecF GG Motif RPIT_RS06250 PF02355 Protein export membrane protein RPIT_RS06255 PF02355 Protein export membrane protein RPIT_RS06255 PF07549 SecD/SecF GG Motif RPIT_RS06260 PF02699 Preprotein translocase subunit RPIT_RS06265 PF05496 Holliday junction DNA helicase RuvB P-loop domain RPIT_RS06265 PF05491 RuvB C-terminal winged helix domain RPIT_RS06265 PF17864 RuvB AAA lid domain RPIT_RS06270 PF07499 RuvA, C-terminal domain RPIT_RS06270 PF01330 RuvA N terminal domain RPIT_RS06275 PF02075 Crossover junction endodeoxyribonuclease RuvC RPIT_RS06280 PF01709 Transcriptional regulator RPIT_RS06305 PF00977 Histidine biosynthesis protein RPIT_RS06310 PF00117 Glutamine amidotransferase class-I RPIT_RS06315 PF00475 Imidazoleglycerol-phosphate dehydratase RPIT_RS06320 PF00155 Aminotransferase class I and II RPIT_RS06325 PF00815 Histidinol dehydrogenase RPIT_RS06335 PF14579 Helix-hairpin-helix motif RPIT_RS06335 PF02811 PHP domain RPIT_RS06335 PF07733 Bacterial DNA polymerase III alpha NTPase domain RPIT_RS06335 PF17657 Bacterial DNA polymerase III alpha subunit finger domain RPIT_RS06345 PF00528 Binding-protein-dependent transport system inner membrane component RPIT_RS06350 PF08402 TOBE domain RPIT_RS06350 PF00005 ABC transporter RPIT_RS06360 PF07992 Pyridine nucleotide-disulphide oxidoreductase RPIT_RS06360 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster RPIT_RS06365 PF01645 Conserved region in glutamate synthase RPIT_RS06365 PF00310 Glutamine amidotransferases class-II RPIT_RS06365 PF01493 GXGXG motif RPIT_RS06365 PF04898 Glutamate synthase central domain RPIT_RS06370 PF02630 SCO1/SenC RPIT_RS06375 PF00290 Tryptophan synthase alpha chain RPIT_RS06380 PF00291 Pyridoxal-phosphate dependent enzyme RPIT_RS06385 PF00218 Indole-3-glycerol phosphate synthase RPIT_RS06400 PF04715 Anthranilate synthase component I, N terminal region RPIT_RS06400 PF00425 chorismate binding enzyme RPIT_RS06405 PF01502 Phosphoribosyl-AMP cyclohydrolase RPIT_RS06450 PF02934 GatB/GatE catalytic domain RPIT_RS06450 PF02637 GatB domain RPIT_RS06455 PF01425 Amidase RPIT_RS06460 PF02686 Glu-tRNAGln amidotransferase C subunit RPIT_RS06480 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain RPIT_RS06480 PF00326 Prolyl oligopeptidase family RPIT_RS06485 PF00266 Aminotransferase class-V RPIT_RS06490 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) RPIT_RS06490 PF00128 Alpha amylase, catalytic domain RPIT_RS06495 PF11896 Domain of unknown function (DUF3416) RPIT_RS06500 PF01636 Phosphotransferase enzyme family RPIT_RS06500 PF18085 Maltokinase N-terminal cap domain RPIT_RS06505 PF02806 Alpha amylase, C-terminal all-beta domain RPIT_RS06505 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) RPIT_RS06505 PF00128 Alpha amylase, catalytic domain RPIT_RS06520 PF00571 CBS domain RPIT_RS06525 PF00128 Alpha amylase, catalytic domain RPIT_RS06530 PF00128 Alpha amylase, catalytic domain RPIT_RS06530 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) RPIT_RS06540 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II RPIT_RS06540 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III RPIT_RS06540 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I RPIT_RS06540 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain RPIT_RS06560 PF01594 AI-2E family transporter RPIT_RS06565 PF01939 Endonuclease NucS RPIT_RS06575 PF00561 alpha/beta hydrolase fold RPIT_RS06580 PF01548 Transposase RPIT_RS06580 PF02371 Transposase IS116/IS110/IS902 family RPIT_RS06585 PF01541 GIY-YIG catalytic domain RPIT_RS06590 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD RPIT_RS06595 PF01923 Cobalamin adenosyltransferase RPIT_RS06605 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain RPIT_RS06610 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RPIT_RS06610 PF02874 ATP synthase alpha/beta family, beta-barrel domain RPIT_RS06615 PF00231 ATP synthase RPIT_RS06620 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RPIT_RS06620 PF02874 ATP synthase alpha/beta family, beta-barrel domain RPIT_RS06620 PF00306 ATP synthase alpha/beta chain, C terminal domain RPIT_RS06625 PF00213 ATP synthase delta (OSCP) subunit RPIT_RS06630 PF00430 ATP synthase B/B' CF(0) RPIT_RS06635 PF00137 ATP synthase subunit C RPIT_RS06640 PF00119 ATP synthase A chain RPIT_RS06650 PF00953 Glycosyl transferase family 4 RPIT_RS06655 PF01300 Telomere recombination RPIT_RS06660 PF17827 PrmC N-terminal domain RPIT_RS06660 PF13649 Methyltransferase domain RPIT_RS06665 PF03462 PCRF domain RPIT_RS06665 PF00472 RF-1 domain RPIT_RS06670 PF01197 Ribosomal protein L31 RPIT_RS06675 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RPIT_RS06675 PF07498 Rho termination factor, N-terminal domain RPIT_RS06675 PF07497 Rho termination factor, RNA-binding domain RPIT_RS06680 PF08544 GHMP kinases C terminal RPIT_RS06680 PF00288 GHMP kinases N terminal domain RPIT_RS06685 PF01842 ACT domain RPIT_RS06685 PF03447 Homoserine dehydrogenase, NAD binding domain RPIT_RS06685 PF00742 Homoserine dehydrogenase RPIT_RS06690 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain RPIT_RS06690 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain RPIT_RS06710 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) RPIT_RS06710 PF16870 2-oxoglutarate dehydrogenase C-terminal RPIT_RS06710 PF02779 Transketolase, pyrimidine binding domain RPIT_RS06710 PF00676 Dehydrogenase E1 component RPIT_RS06710 PF16078 2-oxoglutarate dehydrogenase N-terminus RPIT_RS06715 PF10509 Galactokinase galactose-binding signature RPIT_RS06715 PF08544 GHMP kinases C terminal RPIT_RS06715 PF00288 GHMP kinases N terminal domain RPIT_RS06725 PF02467 Transcription factor WhiB RPIT_RS06740 PF08281 Sigma-70, region 4 RPIT_RS06740 PF04542 Sigma-70 region 2 RPIT_RS06745 PF02586 SOS response associated peptidase (SRAP) RPIT_RS06755 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) RPIT_RS06760 PF03193 RsgA GTPase RPIT_RS06765 PF00459 Inositol monophosphatase family RPIT_RS06770 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RPIT_RS06770 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RPIT_RS06775 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RPIT_RS06775 PF00005 ABC transporter RPIT_RS06780 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RPIT_RS06780 PF00005 ABC transporter RPIT_RS06785 PF12911 N-terminal TM domain of oligopeptide transport permease C RPIT_RS06785 PF00528 Binding-protein-dependent transport system inner membrane component RPIT_RS06790 PF00528 Binding-protein-dependent transport system inner membrane component RPIT_RS06795 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RPIT_RS06800 PF00356 Bacterial regulatory proteins, lacI family RPIT_RS06805 PF13350 Tyrosine phosphatase family RPIT_RS06820 PF00248 Aldo/keto reductase family RPIT_RS06835 PF03699 Uncharacterised protein family (UPF0182) RPIT_RS06845 PF13180 PDZ domain RPIT_RS06845 PF05362 Lon protease (S16) C-terminal proteolytic domain RPIT_RS06855 PF00570 HRDC domain RPIT_RS06855 PF13361 UvrD-like helicase C-terminal domain RPIT_RS06855 PF00580 UvrD/REP helicase N-terminal domain RPIT_RS06865 PF00580 UvrD/REP helicase N-terminal domain RPIT_RS06865 PF13361 UvrD-like helicase C-terminal domain RPIT_RS06865 PF12705 PD-(D/E)XK nuclease superfamily RPIT_RS06870 PF13538 UvrD-like helicase C-terminal domain RPIT_RS06875 PF00155 Aminotransferase class I and II RPIT_RS06880 PF04107 Glutamate-cysteine ligase family 2(GCS2) RPIT_RS06885 PF02540 NAD synthase RPIT_RS06885 PF00958 GMP synthase C terminal domain RPIT_RS06885 PF00117 Glutamine amidotransferase class-I RPIT_RS06895 PF00140 Sigma-70 factor, region 1.2 RPIT_RS06895 PF04545 Sigma-70, region 4 RPIT_RS06895 PF04539 Sigma-70 region 3 RPIT_RS06895 PF04542 Sigma-70 region 2 RPIT_RS06900 PF04539 Sigma-70 region 3 RPIT_RS06900 PF04542 Sigma-70 region 2 RPIT_RS06900 PF00140 Sigma-70 factor, region 1.2 RPIT_RS06900 PF04545 Sigma-70, region 4 RPIT_RS06910 PF00270 DEAD/DEAH box helicase RPIT_RS06910 PF11898 Domain of unknown function (DUF3418) RPIT_RS06910 PF04408 Helicase associated domain (HA2) RPIT_RS06910 PF00271 Helicase conserved C-terminal domain RPIT_RS06910 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold RPIT_RS06940 PF00920 Dehydratase family RPIT_RS06945 PF17386 Lacto-N-biose phosphorylase C-terminal domain RPIT_RS06945 PF09508 Lacto-N-biose phosphorylase N-terminal TIM barrel domain RPIT_RS06945 PF17385 Lacto-N-biose phosphorylase central domain RPIT_RS06950 PF00581 Rhodanese-like domain RPIT_RS06955 PF00072 Response regulator receiver domain RPIT_RS06955 PF00196 Bacterial regulatory proteins, luxR family RPIT_RS06960 PF08471 Class II vitamin B12-dependent ribonucleotide reductase RPIT_RS06960 PF02867 Ribonucleotide reductase, barrel domain RPIT_RS06965 PF03477 ATP cone domain RPIT_RS06975 PF00717 Peptidase S24-like RPIT_RS06975 PF01726 LexA DNA binding domain RPIT_RS06980 PF13307 Helicase C-terminal domain RPIT_RS06985 PF13167 GTP-binding GTPase N-terminal RPIT_RS06985 PF01926 50S ribosome-binding GTPase RPIT_RS06985 PF16360 GTP-binding GTPase Middle Region RPIT_RS06990 PF01678 Diaminopimelate epimerase RPIT_RS07010 PF01263 Aldose 1-epimerase RPIT_RS07015 PF00013 KH domain RPIT_RS07015 PF01966 HD domain RPIT_RS07015 PF12072 Domain of unknown function (DUF3552) RPIT_RS07020 PF02631 RecX family RPIT_RS07025 PF00154 recA bacterial DNA recombination protein RPIT_RS07035 PF00455 DeoR C terminal sensor domain RPIT_RS07035 PF08220 DeoR-like helix-turn-helix domain RPIT_RS07045 PF00994 Probable molybdopterin binding domain RPIT_RS07045 PF18146 Damage-inducible protein CinA KH domain RPIT_RS07045 PF02464 Competence-damaged protein RPIT_RS07050 PF01066 CDP-alcohol phosphatidyltransferase RPIT_RS07055 PF00919 Uncharacterized protein family UPF0004 RPIT_RS07055 PF18693 TRAM domain RPIT_RS07055 PF04055 Radical SAM superfamily RPIT_RS07060 PF09397 Ftsk gamma domain RPIT_RS07060 PF01580 FtsK/SpoIIIE family RPIT_RS07060 PF17854 FtsK alpha domain RPIT_RS07065 PF02769 AIR synthase related protein, C-terminal domain RPIT_RS07065 PF00586 AIR synthase related protein, N-terminal domain RPIT_RS07070 PF01820 D-ala D-ala ligase N-terminus RPIT_RS07070 PF07478 D-ala D-ala ligase C-terminus RPIT_RS07085 PF13673 Acetyltransferase (GNAT) domain RPIT_RS07090 PF01872 RibD C-terminal domain RPIT_RS07115 PF00106 short chain dehydrogenase RPIT_RS07120 PF00202 Aminotransferase class-III RPIT_RS07160 PF02371 Transposase IS116/IS110/IS902 family RPIT_RS07160 PF01548 Transposase RPIT_RS07170 PF00174 Oxidoreductase molybdopterin binding domain RPIT_RS07180 PF01545 Cation efflux family RPIT_RS07180 PF16916 Dimerisation domain of Zinc Transporter RPIT_RS07205 PF00486 Transcriptional regulatory protein, C terminal RPIT_RS07205 PF00072 Response regulator receiver domain RPIT_RS07210 PF00672 HAMP domain RPIT_RS07210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPIT_RS07210 PF00512 His Kinase A (phospho-acceptor) domain RPIT_RS07230 PF01790 Prolipoprotein diacylglyceryl transferase RPIT_RS07245 PF00403 Heavy-metal-associated domain RPIT_RS07250 PF02583 Metal-sensitive transcriptional repressor RPIT_RS07275 PF04616 Glycosyl hydrolases family 43 RPIT_RS07275 PF03422 Carbohydrate binding module (family 6) RPIT_RS07280 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain RPIT_RS07280 PF04616 Glycosyl hydrolases family 43 RPIT_RS07285 PF00356 Bacterial regulatory proteins, lacI family RPIT_RS07325 PF13173 AAA domain RPIT_RS07325 PF13635 Domain of unknown function (DUF4143) RPIT_RS07330 PF00106 short chain dehydrogenase RPIT_RS07355 PF13361 UvrD-like helicase C-terminal domain RPIT_RS07355 PF00580 UvrD/REP helicase N-terminal domain RPIT_RS07375 PF13361 UvrD-like helicase C-terminal domain RPIT_RS07375 PF00580 UvrD/REP helicase N-terminal domain RPIT_RS07380 PF00270 DEAD/DEAH box helicase RPIT_RS07380 PF08494 DEAD/H associated RPIT_RS07380 PF00271 Helicase conserved C-terminal domain RPIT_RS07410 PF00128 Alpha amylase, catalytic domain RPIT_RS07445 PF00082 Subtilase family RPIT_RS07455 PF01548 Transposase RPIT_RS07455 PF02371 Transposase IS116/IS110/IS902 family RPIT_RS07530 PF00176 SNF2 family N-terminal domain RPIT_RS07530 PF00271 Helicase conserved C-terminal domain RPIT_RS07580 PF01850 PIN domain RPIT_RS07600 PF01545 Cation efflux family RPIT_RS07620 PF00005 ABC transporter RPIT_RS07640 PF16859 Tetracyclin repressor-like, C-terminal domain RPIT_RS07640 PF00440 Bacterial regulatory proteins, tetR family RPIT_RS07665 PF13443 Cro/C1-type HTH DNA-binding domain RPIT_RS07700 PF07676 WD40-like Beta Propeller Repeat RPIT_RS07700 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region RPIT_RS07700 PF00326 Prolyl oligopeptidase family RPIT_RS07705 PF13823 Alcohol dehydrogenase GroES-associated RPIT_RS07705 PF00107 Zinc-binding dehydrogenase RPIT_RS07705 PF08240 Alcohol dehydrogenase GroES-like domain RPIT_RS07710 PF03167 Uracil DNA glycosylase superfamily RPIT_RS07715 PF01965 DJ-1/PfpI family RPIT_RS07730 PF00196 Bacterial regulatory proteins, luxR family RPIT_RS07730 PF00072 Response regulator receiver domain RPIT_RS07755 PF00553 Cellulose binding domain RPIT_RS07755 PF01341 Glycosyl hydrolases family 6 RPIT_RS07770 PF00069 Protein kinase domain RPIT_RS07800 PF00069 Protein kinase domain RPIT_RS07815 PF02694 Uncharacterised BCR, YnfA/UPF0060 family RPIT_RS07830 PF00694 Aconitase C-terminal domain RPIT_RS07835 PF00330 Aconitase family (aconitate hydratase) RPIT_RS07840 PF09339 IclR helix-turn-helix domain RPIT_RS07840 PF01614 Bacterial transcriptional regulator RPIT_RS07860 PF02517 CPBP intramembrane metalloprotease RPIT_RS07865 PF01557 Fumarylacetoacetate (FAA) hydrolase family RPIT_RS07870 PF08502 LeuA allosteric (dimerisation) domain RPIT_RS07870 PF00682 HMGL-like RPIT_RS07875 PF00180 Isocitrate/isopropylmalate dehydrogenase RPIT_RS07880 PF00391 PEP-utilising enzyme, mobile domain RPIT_RS07880 PF02896 PEP-utilising enzyme, TIM barrel domain RPIT_RS07880 PF05524 PEP-utilising enzyme, N-terminal RPIT_RS07885 PF13302 Acetyltransferase (GNAT) domain RPIT_RS07890 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain RPIT_RS07890 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain RPIT_RS07895 PF10369 Small subunit of acetolactate synthase RPIT_RS07900 PF00205 Thiamine pyrophosphate enzyme, central domain RPIT_RS07900 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RPIT_RS07900 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RPIT_RS07910 PF01230 HIT domain RPIT_RS07915 PF00977 Histidine biosynthesis protein RPIT_RS07920 PF08148 DSHCT (NUC185) domain RPIT_RS07920 PF00270 DEAD/DEAH box helicase RPIT_RS07920 PF00271 Helicase conserved C-terminal domain RPIT_RS07925 PF00781 Diacylglycerol kinase catalytic domain RPIT_RS07930 PF00902 Sec-independent protein translocase protein (TatC) RPIT_RS07935 PF02416 mttA/Hcf106 family RPIT_RS07940 PF13280 WYL domain RPIT_RS07945 PF13280 WYL domain RPIT_RS07950 PF00749 tRNA synthetases class I (E and Q), catalytic domain RPIT_RS07955 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase RPIT_RS07955 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RPIT_RS07960 PF00849 RNA pseudouridylate synthase RPIT_RS07960 PF01479 S4 domain RPIT_RS07965 PF04079 Segregation and condensation complex subunit ScpB RPIT_RS07970 PF02616 Segregation and condensation protein ScpA RPIT_RS07980 PF13614 AAA domain RPIT_RS07995 PF00589 Phage integrase family RPIT_RS07995 PF02899 Phage integrase, N-terminal SAM-like domain RPIT_RS08005 PF06418 CTP synthase N-terminus RPIT_RS08005 PF00117 Glutamine amidotransferase class-I RPIT_RS08015 PF02463 RecF/RecN/SMC N terminal domain RPIT_RS08020 PF01513 ATP-NAD kinase RPIT_RS08025 PF01728 FtsJ-like methyltransferase RPIT_RS08025 PF01479 S4 domain RPIT_RS08035 PF13344 Haloacid dehalogenase-like hydrolase RPIT_RS08075 PF08281 Sigma-70, region 4 RPIT_RS08075 PF04542 Sigma-70 region 2 RPIT_RS08115 PF00579 tRNA synthetases class I (W and Y) RPIT_RS08120 PF01039 Carboxyl transferase domain RPIT_RS08125 PF00206 Lyase RPIT_RS08125 PF14698 Argininosuccinate lyase C-terminal RPIT_RS08130 PF02863 Arginine repressor, C-terminal domain RPIT_RS08130 PF01316 Arginine repressor, DNA binding domain RPIT_RS08135 PF00202 Aminotransferase class-III RPIT_RS08140 PF00696 Amino acid kinase family RPIT_RS08145 PF01960 ArgJ family RPIT_RS08150 PF02774 Semialdehyde dehydrogenase, dimerisation domain RPIT_RS08150 PF01118 Semialdehyde dehydrogenase, NAD binding domain RPIT_RS08165 PF17676 LD-carboxypeptidase C-terminal domain RPIT_RS08165 PF02016 LD-carboxypeptidase N-terminal domain RPIT_RS08170 PF00067 Cytochrome P450 RPIT_RS08175 PF02909 Tetracyclin repressor-like, C-terminal domain RPIT_RS08175 PF00440 Bacterial regulatory proteins, tetR family RPIT_RS08185 PF03484 tRNA synthetase B5 domain RPIT_RS08185 PF03147 Ferredoxin-fold anticodon binding domain RPIT_RS08185 PF01588 Putative tRNA binding domain RPIT_RS08185 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain RPIT_RS08185 PF03483 B3/4 domain RPIT_RS08190 PF01409 tRNA synthetases class II core domain (F) RPIT_RS08190 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain RPIT_RS08195 PF00588 SpoU rRNA Methylase family RPIT_RS08195 PF08032 RNA 2'-O ribose methyltransferase substrate binding RPIT_RS08200 PF00453 Ribosomal protein L20 RPIT_RS08205 PF01632 Ribosomal protein L35 RPIT_RS08210 PF00707 Translation initiation factor IF-3, C-terminal domain RPIT_RS08210 PF05198 Translation initiation factor IF-3, N-terminal domain RPIT_RS08230 PF08029 HisG, C-terminal domain RPIT_RS08230 PF01634 ATP phosphoribosyltransferase RPIT_RS08235 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase RPIT_RS08240 PF01406 tRNA synthetases class I (C) catalytic domain RPIT_RS08260 PF02673 Bacitracin resistance protein BacA RPIT_RS08265 PF00248 Aldo/keto reductase family RPIT_RS08305 PF00589 Phage integrase family RPIT_RS08305 PF02899 Phage integrase, N-terminal SAM-like domain RPIT_RS08310 PF00270 DEAD/DEAH box helicase RPIT_RS08310 PF13749 Putative ATP-dependent DNA helicase recG C-terminal RPIT_RS08310 PF17191 RecG wedge domain RPIT_RS08325 PF00872 Transposase, Mutator family RPIT_RS08340 PF01230 HIT domain RPIT_RS08345 PF07732 Multicopper oxidase RPIT_RS08345 PF07731 Multicopper oxidase RPIT_RS08345 PF00394 Multicopper oxidase RPIT_RS08355 PF00072 Response regulator receiver domain RPIT_RS08355 PF00486 Transcriptional regulatory protein, C terminal RPIT_RS08360 PF00672 HAMP domain RPIT_RS08360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPIT_RS08360 PF00512 His Kinase A (phospho-acceptor) domain RPIT_RS08380 PF12704 MacB-like periplasmic core domain RPIT_RS08380 PF02687 FtsX-like permease family RPIT_RS08380 PF00005 ABC transporter RPIT_RS08410 PF00291 Pyridoxal-phosphate dependent enzyme RPIT_RS08415 PF13419 Haloacid dehalogenase-like hydrolase RPIT_RS08435 PF00005 ABC transporter RPIT_RS08455 PF02481 DNA recombination-mediator protein A RPIT_RS08455 PF17782 DprA winged helix domain RPIT_RS08465 PF02021 Uncharacterised protein family UPF0102 RPIT_RS08470 PF10611 Protein of unknown function (DUF2469) RPIT_RS08475 PF01351 Ribonuclease HII RPIT_RS08480 PF10502 Signal peptidase, peptidase S26 RPIT_RS08485 PF01245 Ribosomal protein L19 RPIT_RS08490 PF13183 4Fe-4S dicluster domain RPIT_RS08490 PF13085 2Fe-2S iron-sulfur cluster binding domain RPIT_RS08495 PF00890 FAD binding domain RPIT_RS08495 PF02910 Fumarate reductase flavoprotein C-term RPIT_RS08505 PF01746 tRNA (Guanine-1)-methyltransferase RPIT_RS08510 PF01782 RimM N-terminal domain RPIT_RS08510 PF05239 PRC-barrel domain RPIT_RS08520 PF00886 Ribosomal protein S16 RPIT_RS08535 PF01979 Amidohydrolase family RPIT_RS08560 PF00072 Response regulator receiver domain RPIT_RS08560 PF00196 Bacterial regulatory proteins, luxR family RPIT_RS08570 PF00005 ABC transporter RPIT_RS08575 PF00196 Bacterial regulatory proteins, luxR family RPIT_RS08580 PF00005 ABC transporter RPIT_RS08580 PF00664 ABC transporter transmembrane region RPIT_RS08585 PF00448 SRP54-type protein, GTPase domain RPIT_RS08585 PF02881 SRP54-type protein, helical bundle domain RPIT_RS08590 PF06470 SMC proteins Flexible Hinge Domain RPIT_RS08590 PF02463 RecF/RecN/SMC N terminal domain RPIT_RS08600 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain RPIT_RS08600 PF06827 Zinc finger found in FPG and IleRS RPIT_RS08600 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain RPIT_RS08605 PF00035 Double-stranded RNA binding motif RPIT_RS08605 PF14622 Ribonuclease-III-like RPIT_RS08610 PF01783 Ribosomal L32p protein family RPIT_RS08615 PF02620 Large ribosomal RNA subunit accumulation protein YceD RPIT_RS08620 PF01467 Cytidylyltransferase-like RPIT_RS08630 PF00270 DEAD/DEAH box helicase RPIT_RS08630 PF00271 Helicase conserved C-terminal domain RPIT_RS08630 PF17191 RecG wedge domain RPIT_RS08645 PF00830 Ribosomal L28 family RPIT_RS08650 PF10150 Ribonuclease E/G family RPIT_RS08660 PF07690 Major Facilitator Superfamily RPIT_RS08665 PF08903 Domain of unknown function (DUF1846) RPIT_RS08670 PF00364 Biotin-requiring enzyme RPIT_RS08670 PF00561 alpha/beta hydrolase fold RPIT_RS08675 PF00708 Acylphosphatase RPIT_RS08685 PF00334 Nucleoside diphosphate kinase RPIT_RS08695 PF08245 Mur ligase middle domain RPIT_RS08695 PF02875 Mur ligase family, glutamate ligase domain RPIT_RS08705 PF00133 tRNA synthetases class I (I, L, M and V) RPIT_RS08705 PF08264 Anticodon-binding domain of tRNA RPIT_RS08710 PF03572 Peptidase family S41 RPIT_RS08710 PF14685 Tricorn protease PDZ domain RPIT_RS08710 PF07676 WD40-like Beta Propeller Repeat RPIT_RS08710 PF14684 Tricorn protease C1 domain RPIT_RS08720 PF06689 ClpX C4-type zinc finger RPIT_RS08720 PF10431 C-terminal, D2-small domain, of ClpB protein RPIT_RS08720 PF07724 AAA domain (Cdc48 subfamily) RPIT_RS08725 PF00574 Clp protease RPIT_RS08730 PF00574 Clp protease RPIT_RS08735 PF01594 AI-2E family transporter RPIT_RS08740 PF05698 Bacterial trigger factor protein (TF) C-terminus RPIT_RS08740 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RPIT_RS08740 PF05697 Bacterial trigger factor protein (TF) RPIT_RS08770 PF00128 Alpha amylase, catalytic domain RPIT_RS08775 PF00528 Binding-protein-dependent transport system inner membrane component RPIT_RS08780 PF00528 Binding-protein-dependent transport system inner membrane component RPIT_RS08795 PF00480 ROK family RPIT_RS08800 PF04960 Glutaminase RPIT_RS08820 PF00107 Zinc-binding dehydrogenase RPIT_RS08820 PF08240 Alcohol dehydrogenase GroES-like domain RPIT_RS08830 PF06827 Zinc finger found in FPG and IleRS RPIT_RS08830 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain RPIT_RS08830 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain RPIT_RS08835 PF02502 Ribose/Galactose Isomerase RPIT_RS08840 PF17668 Acetyltransferase (GNAT) domain RPIT_RS08840 PF13530 Sterol carrier protein domain RPIT_RS08845 PF03119 NAD-dependent DNA ligase C4 zinc finger domain RPIT_RS08845 PF12826 Helix-hairpin-helix motif RPIT_RS08845 PF01653 NAD-dependent DNA ligase adenylation domain RPIT_RS08845 PF00533 BRCA1 C Terminus (BRCT) domain RPIT_RS08845 PF03120 NAD-dependent DNA ligase OB-fold domain RPIT_RS08850 PF11838 ERAP1-like C-terminal domain RPIT_RS08850 PF01433 Peptidase family M1 domain RPIT_RS08860 PF00156 Phosphoribosyl transferase domain RPIT_RS08865 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain RPIT_RS08865 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain RPIT_RS08870 PF01979 Amidohydrolase family RPIT_RS08875 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RPIT_RS08875 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain RPIT_RS08880 PF08494 DEAD/H associated RPIT_RS08880 PF00271 Helicase conserved C-terminal domain RPIT_RS08880 PF00270 DEAD/DEAH box helicase RPIT_RS08885 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain RPIT_RS08885 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain RPIT_RS08890 PF00356 Bacterial regulatory proteins, lacI family RPIT_RS08895 PF02610 L-arabinose isomerase RPIT_RS08895 PF11762 L-arabinose isomerase C-terminal domain RPIT_RS08900 PF00596 Class II Aldolase and Adducin N-terminal domain RPIT_RS08910 PF00501 AMP-binding enzyme RPIT_RS08920 PF01565 FAD binding domain RPIT_RS08920 PF02913 FAD linked oxidases, C-terminal domain RPIT_RS08925 PF08281 Sigma-70, region 4 RPIT_RS08925 PF04542 Sigma-70 region 2 RPIT_RS08940 PF12848 ABC transporter RPIT_RS08940 PF00005 ABC transporter RPIT_RS08980 PF00929 Exonuclease RPIT_RS09015 PF00202 Aminotransferase class-III RPIT_RS09025 PF02649 Type I GTP cyclohydrolase folE2 RPIT_RS09030 PF00145 C-5 cytosine-specific DNA methylase RPIT_RS09030 PF12728 Helix-turn-helix domain RPIT_RS09100 PF01026 TatD related DNase RPIT_RS09105 PF00274 Fructose-bisphosphate aldolase class-I RPIT_RS09110 PF01266 FAD dependent oxidoreductase RPIT_RS09120 PF16657 Maltogenic Amylase, C-terminal domain RPIT_RS09120 PF00128 Alpha amylase, catalytic domain RPIT_RS09125 PF00085 Thioredoxin RPIT_RS09130 PF04239 Protein of unknown function (DUF421) RPIT_RS09200 PF02785 Biotin carboxylase C-terminal domain RPIT_RS09200 PF00289 Biotin carboxylase, N-terminal domain RPIT_RS09200 PF00364 Biotin-requiring enzyme RPIT_RS09200 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RPIT_RS09200 PF00682 HMGL-like RPIT_RS09200 PF02436 Conserved carboxylase domain RPIT_RS09205 PF02709 N-terminal domain of galactosyltransferase RPIT_RS09205 PF00535 Glycosyl transferase family 2 RPIT_RS09215 PF00534 Glycosyl transferases group 1 RPIT_RS09215 PF13439 Glycosyltransferase Family 4 RPIT_RS09250 PF01555 DNA methylase RPIT_RS09320 PF00578 AhpC/TSA family RPIT_RS09325 PF01205 Uncharacterized protein family UPF0029 RPIT_RS09325 PF09186 Domain of unknown function (DUF1949) RPIT_RS09335 PF04542 Sigma-70 region 2 RPIT_RS09335 PF08281 Sigma-70, region 4 RPIT_RS09380 PF00817 impB/mucB/samB family RPIT_RS09380 PF11799 impB/mucB/samB family C-terminal domain RPIT_RS09385 PF00186 Dihydrofolate reductase RPIT_RS09395 PF00303 Thymidylate synthase RPIT_RS09400 PF01725 Ham1 family RPIT_RS09405 PF01138 3' exoribonuclease family, domain 1 RPIT_RS09405 PF03725 3' exoribonuclease family, domain 2 RPIT_RS09410 PF01177 Asp/Glu/Hydantoin racemase RPIT_RS09420 PF02617 ATP-dependent Clp protease adaptor protein ClpS RPIT_RS09425 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain RPIT_RS09425 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain RPIT_RS09440 PF02446 4-alpha-glucanotransferase RPIT_RS09450 PF07690 Major Facilitator Superfamily RPIT_RS09460 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain RPIT_RS09460 PF05221 S-adenosyl-L-homocysteine hydrolase RPIT_RS09465 PF01220 Dehydroquinase class II RPIT_RS09475 PF03966 Trm112p-like protein RPIT_RS09480 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain RPIT_RS09480 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II RPIT_RS09480 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I RPIT_RS09480 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III RPIT_RS09505 PF02467 Transcription factor WhiB RPIT_RS09515 PF00483 Nucleotidyl transferase RPIT_RS09515 PF01050 Mannose-6-phosphate isomerase RPIT_RS09530 PF03816 Cell envelope-related transcriptional attenuator domain RPIT_RS09535 PF03816 Cell envelope-related transcriptional attenuator domain RPIT_RS09540 PF00731 AIR carboxylase RPIT_RS09545 PF02222 ATP-grasp domain RPIT_RS09545 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain RPIT_RS09560 PF01039 Carboxyl transferase domain RPIT_RS09570 PF02545 Maf-like protein RPIT_RS09585 PF00293 NUDIX domain RPIT_RS09590 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RPIT_RS09590 PF00364 Biotin-requiring enzyme RPIT_RS09590 PF00289 Biotin carboxylase, N-terminal domain RPIT_RS09590 PF02785 Biotin carboxylase C-terminal domain RPIT_RS09600 PF00501 AMP-binding enzyme RPIT_RS09600 PF13193 AMP-binding enzyme C-terminal domain RPIT_RS09605 PF07992 Pyridine nucleotide-disulphide oxidoreductase RPIT_RS09605 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RPIT_RS09610 PF01048 Phosphorylase superfamily RPIT_RS09615 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I RPIT_RS09615 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II RPIT_RS09615 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain RPIT_RS09615 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III RPIT_RS09635 PF09334 tRNA synthetases class I (M) RPIT_RS09635 PF08264 Anticodon-binding domain of tRNA RPIT_RS09640 PF00075 RNase H RPIT_RS09645 PF00072 Response regulator receiver domain RPIT_RS09645 PF00196 Bacterial regulatory proteins, luxR family RPIT_RS09650 PF13185 GAF domain RPIT_RS09650 PF13492 GAF domain RPIT_RS09650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPIT_RS09650 PF07730 Histidine kinase RPIT_RS09660 PF00962 Adenosine/AMP deaminase RPIT_RS09670 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region RPIT_RS09675 PF02653 Branched-chain amino acid transport system / permease component RPIT_RS09680 PF02653 Branched-chain amino acid transport system / permease component RPIT_RS09685 PF00005 ABC transporter RPIT_RS09690 PF02608 ABC transporter substrate-binding protein PnrA-like RPIT_RS09705 PF03471 Transporter associated domain RPIT_RS09705 PF01595 Cyclin M transmembrane N-terminal domain RPIT_RS09705 PF00571 CBS domain RPIT_RS09710 PF00551 Formyl transferase RPIT_RS09720 PF00474 Sodium:solute symporter family RPIT_RS09725 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain RPIT_RS09725 PF00056 lactate/malate dehydrogenase, NAD binding domain RPIT_RS09745 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain RPIT_RS09745 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain RPIT_RS09750 PF02142 MGS-like domain RPIT_RS09750 PF01808 AICARFT/IMPCHase bienzyme RPIT_RS09755 PF00551 Formyl transferase RPIT_RS09770 PF00549 CoA-ligase RPIT_RS09770 PF02629 CoA binding domain RPIT_RS09775 PF08442 ATP-grasp domain RPIT_RS09775 PF00549 CoA-ligase RPIT_RS09785 PF00580 UvrD/REP helicase N-terminal domain RPIT_RS09785 PF13361 UvrD-like helicase C-terminal domain RPIT_RS09790 PF13091 PLD-like domain RPIT_RS09790 PF13396 Phospholipase_D-nuclease N-terminal RPIT_RS09800 PF04226 Transglycosylase associated protein RPIT_RS09805 PF00196 Bacterial regulatory proteins, luxR family RPIT_RS09805 PF00072 Response regulator receiver domain RPIT_RS09830 PF00117 Glutamine amidotransferase class-I RPIT_RS09830 PF00958 GMP synthase C terminal domain RPIT_RS09830 PF02540 NAD synthase RPIT_RS09835 PF00291 Pyridoxal-phosphate dependent enzyme RPIT_RS09845 PF01152 Bacterial-like globin RPIT_RS09850 PF02153 Prephenate dehydrogenase RPIT_RS09850 PF01817 Chorismate mutase type II RPIT_RS09855 PF00478 IMP dehydrogenase / GMP reductase domain RPIT_RS09860 PF00571 CBS domain RPIT_RS09860 PF00478 IMP dehydrogenase / GMP reductase domain RPIT_RS09870 PF00118 TCP-1/cpn60 chaperonin family RPIT_RS09875 PF00166 Chaperonin 10 Kd subunit RPIT_RS09880 PF04055 Radical SAM superfamily RPIT_RS09880 PF06968 Biotin and Thiamin Synthesis associated domain RPIT_RS09885 PF12464 Maltose acetyltransferase RPIT_RS09885 PF00132 Bacterial transferase hexapeptide (six repeats) RPIT_RS09895 PF02626 Carboxyltransferase domain, subdomain A and B RPIT_RS09905 PF03746 LamB/YcsF family RPIT_RS09915 PF18096 THUMP domain-like RPIT_RS09920 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain RPIT_RS09920 PF00293 NUDIX domain RPIT_RS09920 PF09297 NADH pyrophosphatase zinc ribbon domain RPIT_RS09925 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RPIT_RS09925 PF00005 ABC transporter RPIT_RS09930 PF12911 N-terminal TM domain of oligopeptide transport permease C RPIT_RS09930 PF00528 Binding-protein-dependent transport system inner membrane component RPIT_RS09935 PF00528 Binding-protein-dependent transport system inner membrane component RPIT_RS09940 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RPIT_RS09945 PF00814 Glycoprotease family RPIT_RS09950 PF00583 Acetyltransferase (GNAT) family RPIT_RS09955 PF00814 Glycoprotease family RPIT_RS09960 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE RPIT_RS09965 PF00270 DEAD/DEAH box helicase RPIT_RS09965 PF00271 Helicase conserved C-terminal domain RPIT_RS09970 PF00534 Glycosyl transferases group 1 RPIT_RS09970 PF13439 Glycosyltransferase Family 4 RPIT_RS09975 PF04314 Copper chaperone PCu(A)C RPIT_RS09985 PF01256 Carbohydrate kinase RPIT_RS09985 PF03853 YjeF-related protein N-terminus RPIT_RS09990 PF01648 4'-phosphopantetheinyl transferase superfamily RPIT_RS09995 PF01380 SIS domain RPIT_RS10000 PF00485 Phosphoribulokinase / Uridine kinase family RPIT_RS10005 PF00294 pfkB family carbohydrate kinase RPIT_RS10010 PF05195 Aminopeptidase P, N-terminal domain RPIT_RS10010 PF00557 Metallopeptidase family M24 RPIT_RS10030 PF03448 MgtE intracellular N domain RPIT_RS10030 PF01769 Divalent cation transporter RPIT_RS10030 PF00571 CBS domain RPIT_RS10045 PF01883 Iron-sulfur cluster assembly protein RPIT_RS10045 PF10609 NUBPL iron-transfer P-loop NTPase RPIT_RS10050 PF02416 mttA/Hcf106 family RPIT_RS10060 PF04542 Sigma-70 region 2 RPIT_RS10060 PF08281 Sigma-70, region 4 RPIT_RS10065 PF00701 Dihydrodipicolinate synthetase family RPIT_RS10070 PF01596 O-methyltransferase RPIT_RS10075 PF00483 Nucleotidyl transferase RPIT_RS10080 PF00534 Glycosyl transferases group 1 RPIT_RS10080 PF13439 Glycosyltransferase Family 4 RPIT_RS10095 PF03641 Possible lysine decarboxylase RPIT_RS10100 PF01546 Peptidase family M20/M25/M40 RPIT_RS10100 PF07687 Peptidase dimerisation domain RPIT_RS10105 PF01841 Transglutaminase-like superfamily RPIT_RS10105 PF08379 Bacterial transglutaminase-like N-terminal region RPIT_RS10115 PF04174 A circularly permuted ATPgrasp RPIT_RS10120 PF12368 Rhodanase C-terminal RPIT_RS10120 PF00581 Rhodanese-like domain RPIT_RS10120 PF17773 UPF0176 acylphosphatase like domain RPIT_RS10125 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle RPIT_RS10125 PF14602 Hexapeptide repeat of succinyl-transferase RPIT_RS10135 PF00664 ABC transporter transmembrane region RPIT_RS10135 PF00005 ABC transporter RPIT_RS10140 PF00664 ABC transporter transmembrane region RPIT_RS10140 PF00005 ABC transporter RPIT_RS10145 PF01039 Carboxyl transferase domain RPIT_RS10155 PF00364 Biotin-requiring enzyme RPIT_RS10155 PF00682 HMGL-like RPIT_RS10155 PF02436 Conserved carboxylase domain RPIT_RS10160 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit RPIT_RS10165 PF00155 Aminotransferase class I and II RPIT_RS10170 PF00037 4Fe-4S binding domain RPIT_RS10180 PF01343 Peptidase family S49 RPIT_RS10185 PF02779 Transketolase, pyrimidine binding domain RPIT_RS10185 PF02780 Transketolase, C-terminal domain RPIT_RS10185 PF00456 Transketolase, thiamine diphosphate binding domain RPIT_RS10225 PF00857 Isochorismatase family RPIT_RS10230 PF03471 Transporter associated domain RPIT_RS10230 PF02080 TrkA-C domain RPIT_RS10230 PF00999 Sodium/hydrogen exchanger family RPIT_RS10245 PF06426 Serine acetyltransferase, N-terminal RPIT_RS10245 PF00132 Bacterial transferase hexapeptide (six repeats) RPIT_RS10250 PF00005 ABC transporter RPIT_RS10255 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase RPIT_RS10255 PF06722 Protein of unknown function (DUF1205) RPIT_RS10280 PF03167 Uracil DNA glycosylase superfamily RPIT_RS10285 PF01243 Pyridoxamine 5'-phosphate oxidase RPIT_RS10285 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region RPIT_RS10290 PF00378 Enoyl-CoA hydratase/isomerase RPIT_RS10305 PF01037 Lrp/AsnC ligand binding domain RPIT_RS10310 PF12697 Alpha/beta hydrolase family RPIT_RS10315 PF00004 ATPase family associated with various cellular activities (AAA) RPIT_RS10315 PF05362 Lon protease (S16) C-terminal proteolytic domain RPIT_RS10315 PF02190 ATP-dependent protease La (LON) substrate-binding domain RPIT_RS10320 PF01381 Helix-turn-helix RPIT_RS10340 PF01381 Helix-turn-helix RPIT_RS10350 PF00072 Response regulator receiver domain RPIT_RS10365 PF01926 50S ribosome-binding GTPase RPIT_RS10365 PF06071 Protein of unknown function (DUF933) RPIT_RS10370 PF01497 Periplasmic binding protein RPIT_RS10375 PF01032 FecCD transport family RPIT_RS10380 PF01032 FecCD transport family RPIT_RS10385 PF00005 ABC transporter RPIT_RS10395 PF02127 Aminopeptidase I zinc metalloprotease (M18) RPIT_RS10400 PF02646 RmuC family RPIT_RS10405 PF00585 C-terminal regulatory domain of Threonine dehydratase RPIT_RS10405 PF00291 Pyridoxal-phosphate dependent enzyme RPIT_RS10410 PF02401 LytB protein RPIT_RS10420 PF02601 Exonuclease VII, large subunit RPIT_RS10420 PF13742 OB-fold nucleic acid binding domain RPIT_RS10425 PF02609 Exonuclease VII small subunit RPIT_RS10435 PF01255 Putative undecaprenyl diphosphate synthase RPIT_RS10440 PF03006 Haemolysin-III related RPIT_RS10445 PF02562 PhoH-like protein RPIT_RS10445 PF13638 PIN domain RPIT_RS10450 PF03190 Protein of unknown function, DUF255 RPIT_RS10455 PF01694 Rhomboid family RPIT_RS10460 PF02585 GlcNAc-PI de-N-acetylase RPIT_RS10470 PF03449 Transcription elongation factor, N-terminal RPIT_RS10470 PF01272 Transcription elongation factor, GreA/GreB, C-term RPIT_RS10485 PF03167 Uracil DNA glycosylase superfamily RPIT_RS10495 PF01625 Peptide methionine sulfoxide reductase RPIT_RS10510 PF00248 Aldo/keto reductase family RPIT_RS10525 PF04228 Putative neutral zinc metallopeptidase RPIT_RS10530 PF00293 NUDIX domain RPIT_RS10555 PF01145 SPFH domain / Band 7 family RPIT_RS10555 PF15975 Flotillin RPIT_RS10590 PF02541 Ppx/GppA phosphatase family RPIT_RS10605 PF00113 Enolase, C-terminal TIM barrel domain RPIT_RS10605 PF03952 Enolase, N-terminal domain RPIT_RS10610 PF03819 MazG nucleotide pyrophosphohydrolase domain RPIT_RS10620 PF17757 UvrB interaction domain RPIT_RS10620 PF03461 TRCF domain RPIT_RS10620 PF00271 Helicase conserved C-terminal domain RPIT_RS10620 PF02559 CarD-like/TRCF domain RPIT_RS10620 PF00270 DEAD/DEAH box helicase RPIT_RS10625 PF01195 Peptidyl-tRNA hydrolase RPIT_RS10630 PF14693 Ribosomal protein TL5, C-terminal domain RPIT_RS10630 PF01386 Ribosomal L25p family RPIT_RS10635 PF08021 Siderophore-interacting FAD-binding domain RPIT_RS10635 PF04954 Siderophore-interacting protein RPIT_RS10640 PF14572 Phosphoribosyl synthetase-associated domain RPIT_RS10640 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase RPIT_RS10645 PF00132 Bacterial transferase hexapeptide (six repeats) RPIT_RS10645 PF12804 MobA-like NTP transferase domain RPIT_RS10650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPIT_RS10650 PF00672 HAMP domain RPIT_RS10650 PF00512 His Kinase A (phospho-acceptor) domain RPIT_RS10655 PF00486 Transcriptional regulatory protein, C terminal RPIT_RS10655 PF00072 Response regulator receiver domain RPIT_RS10665 PF00005 ABC transporter RPIT_RS10680 PF08281 Sigma-70, region 4 RPIT_RS10680 PF04542 Sigma-70 region 2 RPIT_RS10730 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RPIT_RS10730 PF00384 Molybdopterin oxidoreductase RPIT_RS10730 PF01568 Molydopterin dinucleotide binding domain RPIT_RS10740 PF04976 DMSO reductase anchor subunit (DmsC) RPIT_RS10750 PF02384 N-6 DNA Methylase RPIT_RS10750 PF12161 HsdM N-terminal domain RPIT_RS10760 PF04471 Restriction endonuclease RPIT_RS10760 PF14338 Mrr N-terminal domain RPIT_RS10765 PF04851 Type III restriction enzyme, res subunit RPIT_RS10765 PF00271 Helicase conserved C-terminal domain RPIT_RS10765 PF08463 EcoEI R protein C-terminal RPIT_RS10765 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) RPIT_RS10795 PF07992 Pyridine nucleotide-disulphide oxidoreductase RPIT_RS10795 PF04324 BFD-like [2Fe-2S] binding domain RPIT_RS10795 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain RPIT_RS10795 PF01077 Nitrite and sulphite reductase 4Fe-4S domain RPIT_RS10795 PF18267 Rubredoxin NAD+ reductase C-terminal domain RPIT_RS10800 PF04324 BFD-like [2Fe-2S] binding domain RPIT_RS10800 PF01077 Nitrite and sulphite reductase 4Fe-4S domain RPIT_RS10800 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain RPIT_RS10800 PF07992 Pyridine nucleotide-disulphide oxidoreductase RPIT_RS10800 PF18267 Rubredoxin NAD+ reductase C-terminal domain RPIT_RS10805 PF01568 Molydopterin dinucleotide binding domain RPIT_RS10805 PF00384 Molybdopterin oxidoreductase RPIT_RS10805 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RPIT_RS10810 PF07690 Major Facilitator Superfamily RPIT_RS10830 PF03352 Methyladenine glycosylase RPIT_RS10835 PF00440 Bacterial regulatory proteins, tetR family RPIT_RS10835 PF16925 Tetracyclin repressor-like, C-terminal domain RPIT_RS10845 PF01047 MarR family RPIT_RS10850 PF08544 GHMP kinases C terminal RPIT_RS10850 PF00288 GHMP kinases N terminal domain RPIT_RS10855 PF00398 Ribosomal RNA adenine dimethylase RPIT_RS10860 PF01026 TatD related DNase RPIT_RS10865 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RPIT_RS10870 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase RPIT_RS10870 PF16192 C-terminal four TMM region of protein-O-mannosyltransferase RPIT_RS10885 PF00005 ABC transporter RPIT_RS10905 PF00860 Permease family RPIT_RS10910 PF01613 Flavin reductase like domain RPIT_RS10930 PF03453 MoeA N-terminal region (domain I and II) RPIT_RS10930 PF03454 MoeA C-terminal region (domain IV) RPIT_RS10930 PF00994 Probable molybdopterin binding domain RPIT_RS10935 PF01812 5-formyltetrahydrofolate cyclo-ligase family RPIT_RS10950 PF01741 Large-conductance mechanosensitive channel, MscL RPIT_RS10995 PF01180 Dihydroorotate dehydrogenase RPIT_RS11000 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RPIT_RS11000 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg RPIT_RS11000 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase RPIT_RS11000 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II RPIT_RS11000 PF10371 Domain of unknown function RPIT_RS11005 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster RPIT_RS11005 PF07992 Pyridine nucleotide-disulphide oxidoreductase RPIT_RS11010 PF00085 Thioredoxin RPIT_RS11015 PF08241 Methyltransferase domain RPIT_RS11020 PF18357 Diphteria toxin repressor SH3 domain RPIT_RS11020 PF02742 Iron dependent repressor, metal binding and dimerisation domain RPIT_RS11020 PF01325 Iron dependent repressor, N-terminal DNA binding domain RPIT_RS11030 PF00266 Aminotransferase class-V RPIT_RS11045 PF00682 HMGL-like RPIT_RS11045 PF02436 Conserved carboxylase domain RPIT_RS11045 PF00364 Biotin-requiring enzyme RPIT_RS11045 PF00289 Biotin carboxylase, N-terminal domain RPIT_RS11045 PF02785 Biotin carboxylase C-terminal domain RPIT_RS11045 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RPIT_RS11055 PF00860 Permease family RPIT_RS11065 PF11228 Protein of unknown function (DUF3027) RPIT_RS11070 PF00313 'Cold-shock' DNA-binding domain RPIT_RS11075 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase RPIT_RS11085 PF00293 NUDIX domain RPIT_RS11100 PF02540 NAD synthase RPIT_RS11100 PF00958 GMP synthase C terminal domain RPIT_RS11100 PF00117 Glutamine amidotransferase class-I RPIT_RS11105 PF00118 TCP-1/cpn60 chaperonin family RPIT_RS11120 PF01238 Phosphomannose isomerase type I RPIT_RS11145 PF01053 Cys/Met metabolism PLP-dependent enzyme RPIT_RS11160 PF08241 Methyltransferase domain RPIT_RS11165 PF01323 DSBA-like thioredoxin domain RPIT_RS11170 PF09190 DALR domain RPIT_RS11170 PF01406 tRNA synthetases class I (C) catalytic domain RPIT_RS11175 PF00588 SpoU rRNA Methylase family RPIT_RS11175 PF08032 RNA 2'-O ribose methyltransferase substrate binding RPIT_RS11180 PF00464 Serine hydroxymethyltransferase RPIT_RS11195 PF02542 YgbB family RPIT_RS11200 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase RPIT_RS11205 PF02559 CarD-like/TRCF domain RPIT_RS11215 PF00072 Response regulator receiver domain RPIT_RS11215 PF00486 Transcriptional regulatory protein, C terminal RPIT_RS11220 PF00512 His Kinase A (phospho-acceptor) domain RPIT_RS11220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPIT_RS11225 PF01895 PhoU domain RPIT_RS11230 PF00300 Histidine phosphatase superfamily (branch 1) RPIT_RS11235 PF00300 Histidine phosphatase superfamily (branch 1) RPIT_RS11240 PF01594 AI-2E family transporter RPIT_RS11245 PF00128 Alpha amylase, catalytic domain RPIT_RS11245 PF11941 Domain of unknown function (DUF3459) RPIT_RS11250 PF00583 Acetyltransferase (GNAT) family RPIT_RS11255 PF00465 Iron-containing alcohol dehydrogenase RPIT_RS11260 PF00364 Biotin-requiring enzyme RPIT_RS11260 PF00682 HMGL-like RPIT_RS11260 PF02436 Conserved carboxylase domain RPIT_RS11270 PF01039 Carboxyl transferase domain RPIT_RS11275 PF02436 Conserved carboxylase domain RPIT_RS11275 PF00682 HMGL-like RPIT_RS11285 PF05448 Acetyl xylan esterase (AXE1) RPIT_RS11290 PF00933 Glycosyl hydrolase family 3 N terminal domain RPIT_RS11290 PF01915 Glycosyl hydrolase family 3 C-terminal domain RPIT_RS11290 PF14310 Fibronectin type III-like domain RPIT_RS11300 PF00528 Binding-protein-dependent transport system inner membrane component RPIT_RS11305 PF00528 Binding-protein-dependent transport system inner membrane component RPIT_RS11310 PF00356 Bacterial regulatory proteins, lacI family RPIT_RS11320 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RPIT_RS11320 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RPIT_RS11335 PF02780 Transketolase, C-terminal domain RPIT_RS11335 PF02779 Transketolase, pyrimidine binding domain RPIT_RS11340 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RPIT_RS11340 PF07992 Pyridine nucleotide-disulphide oxidoreductase RPIT_RS11345 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) RPIT_RS11345 PF00364 Biotin-requiring enzyme RPIT_RS11345 PF02817 e3 binding domain RPIT_RS11350 PF08220 DeoR-like helix-turn-helix domain RPIT_RS11350 PF00455 DeoR C terminal sensor domain RPIT_RS11360 PF11066 Protein of unknown function (DUF2867) RPIT_RS11360 PF13460 NAD(P)H-binding RPIT_RS11365 PF00923 Transaldolase/Fructose-6-phosphate aldolase RPIT_RS11370 PF12146 Serine aminopeptidase, S33 RPIT_RS11375 PF03099 Biotin/lipoate A/B protein ligase family RPIT_RS11375 PF10437 Bacterial lipoate protein ligase C-terminus RPIT_RS11385 PF00356 Bacterial regulatory proteins, lacI family RPIT_RS11390 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RPIT_RS11390 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RPIT_RS11395 PF02952 L-fucose isomerase, C-terminal domain RPIT_RS11395 PF07881 L-fucose isomerase, first N-terminal domain RPIT_RS11395 PF07882 L-fucose isomerase, second N-terminal domain RPIT_RS11400 PF00356 Bacterial regulatory proteins, lacI family RPIT_RS11405 PF02653 Branched-chain amino acid transport system / permease component RPIT_RS11410 PF00005 ABC transporter RPIT_RS11425 PF04542 Sigma-70 region 2 RPIT_RS11425 PF08281 Sigma-70, region 4 RPIT_RS11455 PF00196 Bacterial regulatory proteins, luxR family RPIT_RS11460 PF01116 Fructose-bisphosphate aldolase class-II RPIT_RS11475 PF03471 Transporter associated domain RPIT_RS11475 PF01595 Cyclin M transmembrane N-terminal domain RPIT_RS11475 PF00571 CBS domain RPIT_RS11480 PF03471 Transporter associated domain RPIT_RS11480 PF01595 Cyclin M transmembrane N-terminal domain RPIT_RS11480 PF00571 CBS domain RPIT_RS11490 PF04264 YceI-like domain RPIT_RS11495 PF04011 LemA family RPIT_RS11500 PF00156 Phosphoribosyl transferase domain RPIT_RS11510 PF03023 Lipid II flippase MurJ RPIT_RS11535 PF00251 Glycosyl hydrolases family 32 N-terminal domain RPIT_RS11535 PF08244 Glycosyl hydrolases family 32 C terminal RPIT_RS11545 PF00528 Binding-protein-dependent transport system inner membrane component RPIT_RS11550 PF00528 Binding-protein-dependent transport system inner membrane component RPIT_RS11555 PF00356 Bacterial regulatory proteins, lacI family RPIT_RS11560 PF01266 FAD dependent oxidoreductase RPIT_RS11560 PF00355 Rieske [2Fe-2S] domain RPIT_RS11565 PF01238 Phosphomannose isomerase type I RPIT_RS11575 PF00528 Binding-protein-dependent transport system inner membrane component RPIT_RS11580 PF00528 Binding-protein-dependent transport system inner membrane component RPIT_RS11585 PF01547 Bacterial extracellular solute-binding protein RPIT_RS11595 PF00356 Bacterial regulatory proteins, lacI family RPIT_RS11615 PF00924 Mechanosensitive ion channel RPIT_RS11615 PF05552 Conserved TM helix RPIT_RS11620 PF02540 NAD synthase RPIT_RS11625 PF00005 ABC transporter RPIT_RS11625 PF00571 CBS domain RPIT_RS11630 PF00528 Binding-protein-dependent transport system inner membrane component RPIT_RS11635 PF00528 Binding-protein-dependent transport system inner membrane component RPIT_RS11645 PF00005 ABC transporter RPIT_RS11645 PF00571 CBS domain RPIT_RS11650 PF00528 Binding-protein-dependent transport system inner membrane component RPIT_RS11665 PF00487 Fatty acid desaturase RPIT_RS11670 PF00111 2Fe-2S iron-sulfur cluster binding domain RPIT_RS11670 PF00175 Oxidoreductase NAD-binding domain RPIT_RS11670 PF00970 Oxidoreductase FAD-binding domain RPIT_RS11680 PF01554 MatE RPIT_RS11685 PF07995 Glucose / Sorbosone dehydrogenase RPIT_RS11695 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region RPIT_RS11695 PF01243 Pyridoxamine 5'-phosphate oxidase RPIT_RS11700 PF00542 Ribosomal protein L7/L12 C-terminal domain RPIT_RS11700 PF16320 Ribosomal protein L7/L12 dimerisation domain RPIT_RS11705 PF07724 AAA domain (Cdc48 subfamily) RPIT_RS11705 PF00004 ATPase family associated with various cellular activities (AAA) RPIT_RS11705 PF02861 Clp amino terminal domain, pathogenicity island component RPIT_RS11705 PF10431 C-terminal, D2-small domain, of ClpB protein RPIT_RS11705 PF17871 AAA lid domain RPIT_RS11710 PF00128 Alpha amylase, catalytic domain RPIT_RS11710 PF11941 Domain of unknown function (DUF3459) RPIT_RS11720 PF10011 Predicted membrane protein (DUF2254) RPIT_RS11730 PF01915 Glycosyl hydrolase family 3 C-terminal domain RPIT_RS11730 PF00933 Glycosyl hydrolase family 3 N terminal domain RPIT_RS11740 PF02110 Hydroxyethylthiazole kinase family RPIT_RS11745 PF03070 TENA/THI-4/PQQC family RPIT_RS11745 PF02581 Thiamine monophosphate synthase RPIT_RS11745 PF08543 Phosphomethylpyrimidine kinase RPIT_RS11750 PF08543 Phosphomethylpyrimidine kinase RPIT_RS11755 PF03070 TENA/THI-4/PQQC family RPIT_RS11755 PF08543 Phosphomethylpyrimidine kinase RPIT_RS11755 PF02581 Thiamine monophosphate synthase RPIT_RS11760 PF02535 ZIP Zinc transporter RPIT_RS11780 PF00343 Carbohydrate phosphorylase RPIT_RS11785 PF00069 Protein kinase domain RPIT_RS11785 PF03793 PASTA domain RPIT_RS11790 PF02233 NAD(P) transhydrogenase beta subunit RPIT_RS11795 PF01262 Alanine dehydrogenase/PNT, C-terminal domain RPIT_RS11795 PF05222 Alanine dehydrogenase/PNT, N-terminal domain RPIT_RS11795 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch RPIT_RS11805 PF00056 lactate/malate dehydrogenase, NAD binding domain RPIT_RS11805 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain RPIT_RS11815 PF13411 MerR HTH family regulatory protein RPIT_RS11820 PF00684 DnaJ central domain RPIT_RS11820 PF00226 DnaJ domain RPIT_RS11820 PF01556 DnaJ C terminal domain RPIT_RS11825 PF01025 GrpE RPIT_RS11830 PF00012 Hsp70 protein RPIT_RS11840 PF18494 Pullulanase Ins domain RPIT_RS11840 PF11852 Domain of unknown function (DUF3372) RPIT_RS11840 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) RPIT_RS11840 PF03714 Bacterial pullanase-associated domain RPIT_RS11840 PF17967 Pullulanase N2 domain RPIT_RS11855 PF00528 Binding-protein-dependent transport system inner membrane component RPIT_RS11860 PF00528 Binding-protein-dependent transport system inner membrane component RPIT_RS11880 PF02653 Branched-chain amino acid transport system / permease component RPIT_RS11885 PF00005 ABC transporter RPIT_RS11890 PF00480 ROK family RPIT_RS11895 PF00005 ABC transporter RPIT_RS11900 PF00356 Bacterial regulatory proteins, lacI family RPIT_RS11905 PF00251 Glycosyl hydrolases family 32 N-terminal domain RPIT_RS11905 PF08244 Glycosyl hydrolases family 32 C terminal RPIT_RS11910 PF03033 Glycosyltransferase family 28 N-terminal domain RPIT_RS11910 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase RPIT_RS11930 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain RPIT_RS11930 PF02951 Prokaryotic glutathione synthetase, N-terminal domain RPIT_RS12005 PF14821 Threonine synthase N terminus RPIT_RS12005 PF00291 Pyridoxal-phosphate dependent enzyme RPIT_RS12030 PF07992 Pyridine nucleotide-disulphide oxidoreductase RPIT_RS12035 PF07681 DoxX RPIT_RS12040 PF00072 Response regulator receiver domain RPIT_RS12040 PF00486 Transcriptional regulatory protein, C terminal RPIT_RS12045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPIT_RS12045 PF00512 His Kinase A (phospho-acceptor) domain RPIT_RS12045 PF00672 HAMP domain RPIT_RS12065 PF01791 DeoC/LacD family aldolase RPIT_RS12070 PF00005 ABC transporter RPIT_RS12070 PF00664 ABC transporter transmembrane region RPIT_RS12085 PF00155 Aminotransferase class I and II RPIT_RS12090 PF00133 tRNA synthetases class I (I, L, M and V) RPIT_RS12090 PF08264 Anticodon-binding domain of tRNA RPIT_RS12095 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RPIT_RS12100 PF00583 Acetyltransferase (GNAT) family RPIT_RS12105 PF04337 Protein of unknown function, DUF480 RPIT_RS12110 PF00696 Amino acid kinase family RPIT_RS12110 PF01842 ACT domain RPIT_RS12110 PF13840 ACT domain RPIT_RS12115 PF01547 Bacterial extracellular solute-binding protein RPIT_RS12120 PF05872 Bacterial protein of unknown function (DUF853) RPIT_RS12155 PF14437 MafB19-like deaminase RPIT_RS12170 PF14256 YwiC-like protein RPIT_RS12175 PF00378 Enoyl-CoA hydratase/isomerase RPIT_RS12180 PF03009 Glycerophosphoryl diester phosphodiesterase family RPIT_RS12195 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain RPIT_RS12195 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain RPIT_RS12205 PF03816 Cell envelope-related transcriptional attenuator domain RPIT_RS12225 PF00849 RNA pseudouridylate synthase RPIT_RS12255 PF07690 Major Facilitator Superfamily RPIT_RS12260 PF03816 Cell envelope-related transcriptional attenuator domain RPIT_RS12280 PF13088 BNR repeat-like domain RPIT_RS12280 PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase RPIT_RS12280 PF00754 F5/8 type C domain RPIT_RS12285 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase RPIT_RS12290 PF00480 ROK family RPIT_RS12295 PF00701 Dihydrodipicolinate synthetase family RPIT_RS12300 PF00005 ABC transporter RPIT_RS12300 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RPIT_RS12305 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RPIT_RS12305 PF00005 ABC transporter RPIT_RS12310 PF00528 Binding-protein-dependent transport system inner membrane component RPIT_RS12315 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RPIT_RS12330 PF02585 GlcNAc-PI de-N-acetylase RPIT_RS12335 PF00581 Rhodanese-like domain RPIT_RS12345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPIT_RS12345 PF00512 His Kinase A (phospho-acceptor) domain RPIT_RS12345 PF00672 HAMP domain RPIT_RS12350 PF00486 Transcriptional regulatory protein, C terminal RPIT_RS12350 PF00072 Response regulator receiver domain RPIT_RS12375 PF03703 Bacterial PH domain RPIT_RS12385 PF00005 ABC transporter RPIT_RS12410 PF00534 Glycosyl transferases group 1 RPIT_RS12410 PF13439 Glycosyltransferase Family 4 RPIT_RS12420 PF01261 Xylose isomerase-like TIM barrel RPIT_RS12425 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV RPIT_RS12430 PF00294 pfkB family carbohydrate kinase RPIT_RS12445 PF02806 Alpha amylase, C-terminal all-beta domain RPIT_RS12445 PF00128 Alpha amylase, catalytic domain RPIT_RS12445 PF00686 Starch binding domain RPIT_RS12455 PF02595 Glycerate kinase family RPIT_RS12465 PF17933 Tetracyclin repressor-like, C-terminal domain RPIT_RS12465 PF00440 Bacterial regulatory proteins, tetR family RPIT_RS12470 PF13732 Domain of unknown function (DUF4162) RPIT_RS12470 PF00005 ABC transporter RPIT_RS12485 PF01642 Methylmalonyl-CoA mutase RPIT_RS12490 PF01642 Methylmalonyl-CoA mutase RPIT_RS12490 PF02310 B12 binding domain RPIT_RS12500 PF00005 ABC transporter RPIT_RS12505 PF07730 Histidine kinase RPIT_RS12510 PF00196 Bacterial regulatory proteins, luxR family RPIT_RS12510 PF00072 Response regulator receiver domain RPIT_RS12520 PF00294 pfkB family carbohydrate kinase RPIT_RS12530 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region RPIT_RS12535 PF00483 Nucleotidyl transferase RPIT_RS12540 PF16363 GDP-mannose 4,6 dehydratase RPIT_RS12545 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase RPIT_RS12575 PF00689 Cation transporting ATPase, C-terminus RPIT_RS12575 PF00690 Cation transporter/ATPase, N-terminus RPIT_RS12580 PF12401 Protein of unknown function (DUF2662) RPIT_RS12580 PF00498 FHA domain RPIT_RS12595 PF01098 Cell cycle protein RPIT_RS12600 PF00905 Penicillin binding protein transpeptidase domain RPIT_RS12605 PF00069 Protein kinase domain RPIT_RS12605 PF03793 PASTA domain RPIT_RS12610 PF00117 Glutamine amidotransferase class-I RPIT_RS12620 PF06781 Cell division protein CrgA RPIT_RS12625 PF13419 Haloacid dehalogenase-like hydrolase RPIT_RS12630 PF00152 tRNA synthetases class II (D, K and N) RPIT_RS12630 PF01336 OB-fold nucleic acid binding domain RPIT_RS12640 PF00528 Binding-protein-dependent transport system inner membrane component RPIT_RS12645 PF00528 Binding-protein-dependent transport system inner membrane component RPIT_RS12650 PF00232 Glycosyl hydrolase family 1 RPIT_RS12655 PF00356 Bacterial regulatory proteins, lacI family RPIT_RS12660 PF00171 Aldehyde dehydrogenase family RPIT_RS12670 PF01381 Helix-turn-helix RPIT_RS12680 PF02445 Quinolinate synthetase A protein RPIT_RS12685 PF00890 FAD binding domain RPIT_RS12685 PF02910 Fumarate reductase flavoprotein C-term RPIT_RS12690 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain RPIT_RS12690 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain RPIT_RS12695 PF00923 Transaldolase/Fructose-6-phosphate aldolase RPIT_RS12705 PF07883 Cupin domain RPIT_RS12725 PF02653 Branched-chain amino acid transport system / permease component RPIT_RS12730 PF00005 ABC transporter RPIT_RS12745 PF00356 Bacterial regulatory proteins, lacI family RPIT_RS12750 PF00294 pfkB family carbohydrate kinase RPIT_RS12755 PF01232 Mannitol dehydrogenase Rossmann domain RPIT_RS12755 PF08125 Mannitol dehydrogenase C-terminal domain RPIT_RS12775 PF07929 Plasmid pRiA4b ORF-3-like protein RPIT_RS12785 PF00005 ABC transporter RPIT_RS12785 PF00664 ABC transporter transmembrane region RPIT_RS12790 PF00664 ABC transporter transmembrane region RPIT_RS12790 PF00005 ABC transporter RPIT_RS12795 PF00480 ROK family RPIT_RS12800 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RPIT_RS12805 PF03976 Polyphosphate kinase 2 (PPK2) RPIT_RS12810 PF03965 Penicillinase repressor RPIT_RS12815 PF01654 Cytochrome bd terminal oxidase subunit I RPIT_RS12820 PF02322 Cytochrome bd terminal oxidase subunit II RPIT_RS12825 PF00005 ABC transporter RPIT_RS12825 PF00664 ABC transporter transmembrane region RPIT_RS12835 PF13439 Glycosyltransferase Family 4 RPIT_RS12835 PF00534 Glycosyl transferases group 1 RPIT_RS12840 PF10415 Fumarase C C-terminus RPIT_RS12840 PF00206 Lyase RPIT_RS12845 PF00403 Heavy-metal-associated domain RPIT_RS12855 PF02583 Metal-sensitive transcriptional repressor RPIT_RS12860 PF03796 DnaB-like helicase C terminal domain RPIT_RS12860 PF00772 DnaB-like helicase N terminal domain RPIT_RS12865 PF01022 Bacterial regulatory protein, arsR family RPIT_RS12870 PF06953 Arsenical resistance operon trans-acting repressor ArsD RPIT_RS12875 PF02374 Anion-transporting ATPase RPIT_RS12880 PF01451 Low molecular weight phosphotyrosine protein phosphatase RPIT_RS12885 PF01451 Low molecular weight phosphotyrosine protein phosphatase RPIT_RS12895 PF00633 Helix-hairpin-helix motif RPIT_RS12895 PF00730 HhH-GPD superfamily base excision DNA repair protein RPIT_RS12915 PF03330 Lytic transglycolase RPIT_RS12920 PF00483 Nucleotidyl transferase RPIT_RS12925 PF01262 Alanine dehydrogenase/PNT, C-terminal domain RPIT_RS12925 PF05222 Alanine dehydrogenase/PNT, N-terminal domain RPIT_RS12945 PF00781 Diacylglycerol kinase catalytic domain RPIT_RS12960 PF03030 Inorganic H+ pyrophosphatase RPIT_RS12970 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RPIT_RS12975 PF09594 Glycosyltransferase family 87 RPIT_RS12980 PF02388 FemAB family RPIT_RS12995 PF00905 Penicillin binding protein transpeptidase domain RPIT_RS12995 PF00912 Transglycosylase RPIT_RS13000 PF00924 Mechanosensitive ion channel RPIT_RS13005 PF13735 tRNA nucleotidyltransferase domain 2 putative RPIT_RS13005 PF01743 Poly A polymerase head domain RPIT_RS13005 PF12627 Probable RNA and SrmB- binding site of polymerase A RPIT_RS13015 PF03793 PASTA domain RPIT_RS13015 PF00069 Protein kinase domain RPIT_RS13035 PF01068 ATP dependent DNA ligase domain RPIT_RS13035 PF04679 ATP dependent DNA ligase C terminal region RPIT_RS13040 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RPIT_RS13040 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RPIT_RS13045 PF00230 Major intrinsic protein RPIT_RS13055 PF03176 MMPL family RPIT_RS13060 PF08361 MAATS-type transcriptional repressor, C-terminal region RPIT_RS13060 PF00440 Bacterial regulatory proteins, tetR family RPIT_RS13070 PF00395 S-layer homology domain RPIT_RS13070 PF00331 Glycosyl hydrolase family 10 RPIT_RS13070 PF02018 Carbohydrate binding domain RPIT_RS13070 PF06452 Carbohydrate family 9 binding domain-like RPIT_RS13075 PF13649 Methyltransferase domain RPIT_RS13080 PF01593 Flavin containing amine oxidoreductase RPIT_RS13090 PF01593 Flavin containing amine oxidoreductase RPIT_RS13095 PF00293 NUDIX domain RPIT_RS13100 PF13411 MerR HTH family regulatory protein RPIT_RS13115 PF03741 Integral membrane protein TerC family RPIT_RS13125 PF00893 Small Multidrug Resistance protein RPIT_RS13130 PF00893 Small Multidrug Resistance protein RPIT_RS13135 PF02080 TrkA-C domain RPIT_RS13135 PF06826 Predicted Permease Membrane Region RPIT_RS13140 PF00296 Luciferase-like monooxygenase RPIT_RS13145 PF13443 Cro/C1-type HTH DNA-binding domain RPIT_RS13155 PF00356 Bacterial regulatory proteins, lacI family RPIT_RS13160 PF16874 Glycosyl hydrolase family 36 C-terminal domain RPIT_RS13160 PF16875 Glycosyl hydrolase family 36 N-terminal domain RPIT_RS13165 PF13407 Periplasmic binding protein domain RPIT_RS13170 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RPIT_RS13170 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RPIT_RS13175 PF02653 Branched-chain amino acid transport system / permease component RPIT_RS13180 PF00005 ABC transporter RPIT_RS13185 PF07702 UTRA domain RPIT_RS13185 PF00392 Bacterial regulatory proteins, gntR family RPIT_RS13190 PF00290 Tryptophan synthase alpha chain RPIT_RS13200 PF00356 Bacterial regulatory proteins, lacI family RPIT_RS13225 PF01323 DSBA-like thioredoxin domain RPIT_RS13230 PF00375 Sodium:dicarboxylate symporter family RPIT_RS13245 PF02687 FtsX-like permease family RPIT_RS13245 PF00005 ABC transporter RPIT_RS13245 PF12704 MacB-like periplasmic core domain RPIT_RS13265 PF01022 Bacterial regulatory protein, arsR family RPIT_RS13270 PF02146 Sir2 family RPIT_RS13275 PF05661 Protein of unknown function (DUF808) RPIT_RS13280 PF00248 Aldo/keto reductase family RPIT_RS13295 PF03176 MMPL family RPIT_RS13305 PF06964 Alpha-L-arabinofuranosidase C-terminal domain RPIT_RS13315 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RPIT_RS13320 PF13784 Fic/DOC family N-terminal RPIT_RS13320 PF02661 Fic/DOC family RPIT_RS13365 PF13538 UvrD-like helicase C-terminal domain RPIT_RS13365 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain RPIT_RS13365 PF14490 Helix-hairpin-helix containing domain RPIT_RS13390 PF07731 Multicopper oxidase RPIT_RS13390 PF00394 Multicopper oxidase RPIT_RS13390 PF07732 Multicopper oxidase RPIT_RS13410 PF16901 C-terminal domain of alpha-glycerophosphate oxidase RPIT_RS13410 PF01266 FAD dependent oxidoreductase RPIT_RS13415 PF04198 Putative sugar-binding domain RPIT_RS13420 PF00378 Enoyl-CoA hydratase/isomerase RPIT_RS13430 PF07992 Pyridine nucleotide-disulphide oxidoreductase RPIT_RS13435 PF00085 Thioredoxin RPIT_RS13445 PF00155 Aminotransferase class I and II RPIT_RS13450 PF07478 D-ala D-ala ligase C-terminus RPIT_RS13450 PF01820 D-ala D-ala ligase N-terminus RPIT_RS13465 PF17762 HTH domain found in ParB protein RPIT_RS13465 PF02195 ParB-like nuclease domain RPIT_RS13470 PF13614 AAA domain RPIT_RS13475 PF02527 rRNA small subunit methyltransferase G RPIT_RS13485 PF02096 60Kd inner membrane protein RPIT_RS13490 PF01809 Putative membrane protein insertion efficiency factor RPIT_RS13495 PF00825 Ribonuclease P RPIT_RS13500 PF00468 Ribosomal protein L34 RPIT_RS13505 PF00308 Bacterial dnaA protein RPIT_RS13505 PF08299 Bacterial dnaA protein helix-turn-helix RPIT_RS13510 PF02583 Metal-sensitive transcriptional repressor RPIT_RS13520 PF07992 Pyridine nucleotide-disulphide oxidoreductase RPIT_RS13520 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RPIT_RS13525 PF00005 ABC transporter RPIT_RS13530 PF00005 ABC transporter RPIT_RS13530 PF02687 FtsX-like permease family RPIT_RS13530 PF12704 MacB-like periplasmic core domain RPIT_RS13535 PF02768 DNA polymerase III beta subunit, C-terminal domain RPIT_RS13535 PF02767 DNA polymerase III beta subunit, central domain RPIT_RS13535 PF00712 DNA polymerase III beta subunit, N-terminal domain RPIT_RS13540 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain RPIT_RS13540 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RPIT_RS13545 PF02463 RecF/RecN/SMC N terminal domain RPIT_RS13555 PF05258 Dna[CI] antecedent, DciA RPIT_RS13565 PF00204 DNA gyrase B RPIT_RS13565 PF00986 DNA gyrase B subunit, carboxyl terminus RPIT_RS13565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPIT_RS13565 PF01751 Toprim domain RPIT_RS13570 PF00521 DNA gyrase/topoisomerase IV, subunit A RPIT_RS13570 PF03989 DNA gyrase C-terminal domain, beta-propeller RPIT_RS13575 PF12089 Transmembrane domain of unknown function (DUF3566) RPIT_RS13585 PF13784 Fic/DOC family N-terminal RPIT_RS13585 PF02661 Fic/DOC family RPIT_RS13600 PF06965 Na+/H+ antiporter 1 RPIT_RS13610 PF01790 Prolipoprotein diacylglyceryl transferase RPIT_RS13620 PF02146 Sir2 family RPIT_RS13630 PF07664 Ferrous iron transport protein B C terminus RPIT_RS13630 PF07670 Nucleoside recognition RPIT_RS13630 PF02421 Ferrous iron transport protein B RPIT_RS13650 PF01694 Rhomboid family RPIT_RS13660 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family RPIT_RS13665 PF02397 Bacterial sugar transferase RPIT_RS13675 PF00534 Glycosyl transferases group 1 RPIT_RS13675 PF13477 Glycosyl transferase 4-like RPIT_RS13680 PF01370 NAD dependent epimerase/dehydratase family RPIT_RS13685 PF13614 AAA domain RPIT_RS13695 PF01522 Polysaccharide deacetylase RPIT_RS13705 PF00534 Glycosyl transferases group 1 RPIT_RS13720 PF05362 Lon protease (S16) C-terminal proteolytic domain RPIT_RS13720 PF00004 ATPase family associated with various cellular activities (AAA) RPIT_RS13720 PF02190 ATP-dependent protease La (LON) substrate-binding domain RPIT_RS13735 PF00535 Glycosyl transferase family 2 RPIT_RS13740 PF00535 Glycosyl transferase family 2 RPIT_RS13755 PF00535 Glycosyl transferase family 2 RPIT_RS13760 PF00535 Glycosyl transferase family 2 RPIT_RS13770 PF02779 Transketolase, pyrimidine binding domain RPIT_RS13770 PF02780 Transketolase, C-terminal domain RPIT_RS13775 PF00456 Transketolase, thiamine diphosphate binding domain RPIT_RS13780 PF00248 Aldo/keto reductase family RPIT_RS13785 PF02397 Bacterial sugar transferase RPIT_RS13810 PF00535 Glycosyl transferase family 2 RPIT_RS13815 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RPIT_RS13815 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RPIT_RS13835 PF13614 AAA domain RPIT_RS13885 PF00535 Glycosyl transferase family 2 RPIT_RS13890 PF00872 Transposase, Mutator family RPIT_RS13905 PF00664 ABC transporter transmembrane region RPIT_RS13905 PF00005 ABC transporter RPIT_RS13920 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain RPIT_RS13920 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain RPIT_RS13920 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain RPIT_RS13940 PF00535 Glycosyl transferase family 2 RPIT_RS13950 PF02719 Polysaccharide biosynthesis protein RPIT_RS13965 PF01235 Sodium:alanine symporter family RPIT_RS13970 PF05681 Fumarate hydratase (Fumerase) RPIT_RS13970 PF05683 Fumarase C-terminus RPIT_RS13980 PF02371 Transposase IS116/IS110/IS902 family RPIT_RS13980 PF01548 Transposase RPIT_RS13985 PF00486 Transcriptional regulatory protein, C terminal RPIT_RS13985 PF00072 Response regulator receiver domain RPIT_RS13990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPIT_RS13990 PF18719 ArlS sensor domain RPIT_RS13990 PF00512 His Kinase A (phospho-acceptor) domain RPIT_RS13995 PF02785 Biotin carboxylase C-terminal domain RPIT_RS13995 PF00289 Biotin carboxylase, N-terminal domain RPIT_RS13995 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RPIT_RS14015 PF00027 Cyclic nucleotide-binding domain RPIT_RS14015 PF13545 Crp-like helix-turn-helix domain RPIT_RS14025 PF07690 Major Facilitator Superfamily RPIT_RS14030 PF00664 ABC transporter transmembrane region RPIT_RS14030 PF00005 ABC transporter RPIT_RS14035 PF07690 Major Facilitator Superfamily RPIT_RS14040 PF02417 Chromate transporter RPIT_RS14045 PF00285 Citrate synthase, C-terminal domain RPIT_RS14060 PF13186 Iron-sulfur cluster-binding domain RPIT_RS14060 PF04055 Radical SAM superfamily RPIT_RS14065 PF14572 Phosphoribosyl synthetase-associated domain RPIT_RS14065 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase RPIT_RS14070 PF03358 NADPH-dependent FMN reductase RPIT_RS14075 PF03313 Serine dehydratase alpha chain RPIT_RS14075 PF03315 Serine dehydratase beta chain RPIT_RS14085 PF08240 Alcohol dehydrogenase GroES-like domain RPIT_RS14085 PF00107 Zinc-binding dehydrogenase RPIT_RS14110 PF00437 Type II/IV secretion system protein RPIT_RS14135 PF01063 Amino-transferase class IV RPIT_RS14145 PF03358 NADPH-dependent FMN reductase RPIT_RS14160 PF02585 GlcNAc-PI de-N-acetylase RPIT_RS14200 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) RPIT_RS14200 PF00128 Alpha amylase, catalytic domain RPIT_RS14205 PF03618 Kinase/pyrophosphorylase RPIT_RS14225 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain RPIT_RS14225 PF02896 PEP-utilising enzyme, TIM barrel domain RPIT_RS14225 PF00391 PEP-utilising enzyme, mobile domain RPIT_RS14250 PF00209 Sodium:neurotransmitter symporter family RPIT_RS14255 PF03883 Peroxide stress protein YaaA RPIT_RS14275 PF00501 AMP-binding enzyme RPIT_RS14275 PF01553 Acyltransferase RPIT_RS14280 PF00106 short chain dehydrogenase RPIT_RS14290 PF02371 Transposase IS116/IS110/IS902 family RPIT_RS14290 PF01548 Transposase RPIT_RS14295 PF00871 Acetokinase family RPIT_RS14300 PF07085 DRTGG domain RPIT_RS14300 PF01515 Phosphate acetyl/butaryl transferase RPIT_RS14315 PF00296 Luciferase-like monooxygenase RPIT_RS14320 PF03334 Na+/H+ antiporter subunit RPIT_RS14330 PF01899 Na+/H+ ion antiporter subunit RPIT_RS14335 PF00361 Proton-conducting membrane transporter RPIT_RS14340 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L RPIT_RS14345 PF13244 Domain of unknown function (DUF4040) RPIT_RS14345 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter RPIT_RS14345 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus RPIT_RS14345 PF00361 Proton-conducting membrane transporter RPIT_RS14350 PF01261 Xylose isomerase-like TIM barrel RPIT_RS14355 PF00501 AMP-binding enzyme RPIT_RS14365 PF00581 Rhodanese-like domain RPIT_RS14375 PF01250 Ribosomal protein S6 RPIT_RS14380 PF00436 Single-strand binding protein family RPIT_RS14385 PF01084 Ribosomal protein S18 RPIT_RS14390 PF01281 Ribosomal protein L9, N-terminal domain RPIT_RS14390 PF03948 Ribosomal protein L9, C-terminal domain RPIT_RS14395 PF00962 Adenosine/AMP deaminase RPIT_RS14415 PF17760 UvrA interaction domain RPIT_RS14415 PF00005 ABC transporter RPIT_RS14415 PF17755 UvrA DNA-binding domain RPIT_RS14420 PF06902 Divergent 4Fe-4S mono-cluster RPIT_RS14425 PF00583 Acetyltransferase (GNAT) family RPIT_RS14440 PF02254 TrkA-N domain RPIT_RS14440 PF00999 Sodium/hydrogen exchanger family RPIT_RS14445 PF00106 short chain dehydrogenase RPIT_RS14455 PF01699 Sodium/calcium exchanger protein RPIT_RS14470 PF00239 Resolvase, N terminal domain RPIT_RS14470 PF02796 Helix-turn-helix domain of resolvase RPIT_RS14475 PF01636 Phosphotransferase enzyme family RPIT_RS14480 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase RPIT_RS14505 PF13614 AAA domain RPIT_RS14520 PF00239 Resolvase, N terminal domain RPIT_RS14520 PF02796 Helix-turn-helix domain of resolvase RPIT_RS14525 PF00872 Transposase, Mutator family RPIT_RS14540 PF00809 Pterin binding enzyme RPIT_RS14560 PF00326 Prolyl oligopeptidase family RPIT_RS14560 PF07676 WD40-like Beta Propeller Repeat RPIT_RS14560 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region RPIT_RS14575 PF01594 AI-2E family transporter RPIT_RS14590 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RPIT_RS14590 PF00005 ABC transporter RPIT_RS14595 PF00005 ABC transporter RPIT_RS14595 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RPIT_RS14600 PF12911 N-terminal TM domain of oligopeptide transport permease C RPIT_RS14600 PF00528 Binding-protein-dependent transport system inner membrane component RPIT_RS14605 PF00528 Binding-protein-dependent transport system inner membrane component RPIT_RS14610 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RPIT_RS14615 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RPIT_RS14615 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RPIT_RS14620 PF01261 Xylose isomerase-like TIM barrel RPIT_RS14625 PF01022 Bacterial regulatory protein, arsR family RPIT_RS14650 PF13632 Glycosyl transferase family group 2 RPIT_RS14650 PF00535 Glycosyl transferase family 2 RPIT_RS14655 PF00009 Elongation factor Tu GTP binding domain RPIT_RS14655 PF03144 Elongation factor Tu domain 2 RPIT_RS14655 PF16658 Class II release factor RF3, C-terminal domain RPIT_RS14660 PF09278 MerR, DNA binding RPIT_RS14660 PF00376 MerR family regulatory protein RPIT_RS14670 PF00011 Hsp20/alpha crystallin family RPIT_RS14680 PF16363 GDP-mannose 4,6 dehydratase RPIT_RS14695 PF00916 Sulfate permease family RPIT_RS14695 PF01740 STAS domain RPIT_RS14705 PF03006 Haemolysin-III related RPIT_RS14720 PF00528 Binding-protein-dependent transport system inner membrane component RPIT_RS14725 PF00528 Binding-protein-dependent transport system inner membrane component RPIT_RS14745 PF04358 DsrC like protein RPIT_RS14750 PF07992 Pyridine nucleotide-disulphide oxidoreductase RPIT_RS14755 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain RPIT_RS14755 PF01077 Nitrite and sulphite reductase 4Fe-4S domain