locus-tag class description CFI11_RS00005 PF02545 Maf-like protein CFI11_RS00010 PF08501 Shikimate dehydrogenase substrate binding domain CFI11_RS00010 PF01488 Shikimate / quinate 5-dehydrogenase CFI11_RS00010 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CFI11_RS00015 PF01121 Dephospho-CoA kinase CFI11_RS00020 PF00929 Exonuclease CFI11_RS00025 PF02556 Preprotein translocase subunit SecB CFI11_RS00030 PF04186 FxsA cytoplasmic membrane protein CFI11_RS00060 PF00004 ATPase family associated with various cellular activities (AAA) CFI11_RS00060 PF07724 AAA domain (Cdc48 subfamily) CFI11_RS00065 PF00227 Proteasome subunit CFI11_RS00075 PF00085 Thioredoxin CFI11_RS00080 PF13361 UvrD-like helicase C-terminal domain CFI11_RS00080 PF00580 UvrD/REP helicase N-terminal domain CFI11_RS00080 PF12705 PD-(D/E)XK nuclease superfamily CFI11_RS00090 PF12804 MobA-like NTP transferase domain CFI11_RS00095 PF01636 Phosphotransferase enzyme family CFI11_RS00100 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CFI11_RS00110 PF00512 His Kinase A (phospho-acceptor) domain CFI11_RS00110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFI11_RS00115 PF02630 SCO1/SenC CFI11_RS00120 PF00072 Response regulator receiver domain CFI11_RS00130 PF01966 HD domain CFI11_RS00135 PF08240 Alcohol dehydrogenase GroES-like domain CFI11_RS00135 PF00107 Zinc-binding dehydrogenase CFI11_RS00145 PF05221 S-adenosyl-L-homocysteine hydrolase CFI11_RS00145 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CFI11_RS00175 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CFI11_RS00175 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CFI11_RS00180 PF00814 Glycoprotease family CFI11_RS00210 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CFI11_RS00210 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CFI11_RS00240 PF00579 tRNA synthetases class I (W and Y) CFI11_RS00255 PF02223 Thymidylate kinase CFI11_RS00270 PF00005 ABC transporter CFI11_RS00275 PF02361 Cobalt transport protein CFI11_RS00280 PF02632 BioY family CFI11_RS00285 PF13193 AMP-binding enzyme C-terminal domain CFI11_RS00285 PF00501 AMP-binding enzyme CFI11_RS00295 PF12832 MFS_1 like family CFI11_RS00300 PF13193 AMP-binding enzyme C-terminal domain CFI11_RS00300 PF00501 AMP-binding enzyme CFI11_RS00305 PF00106 short chain dehydrogenase CFI11_RS00350 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CFI11_RS00350 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CFI11_RS00365 PF13193 AMP-binding enzyme C-terminal domain CFI11_RS00365 PF00501 AMP-binding enzyme CFI11_RS00375 PF13193 AMP-binding enzyme C-terminal domain CFI11_RS00375 PF00501 AMP-binding enzyme CFI11_RS00380 PF00067 Cytochrome P450 CFI11_RS00385 PF13193 AMP-binding enzyme C-terminal domain CFI11_RS00385 PF00501 AMP-binding enzyme CFI11_RS00390 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CFI11_RS00395 PF00005 ABC transporter CFI11_RS00415 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CFI11_RS00415 PF02770 Acyl-CoA dehydrogenase, middle domain CFI11_RS00415 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CFI11_RS00420 PF01648 4'-phosphopantetheinyl transferase superfamily CFI11_RS00425 PF12833 Helix-turn-helix domain CFI11_RS00430 PF02119 Flagellar P-ring protein CFI11_RS00445 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CFI11_RS00445 PF00460 Flagella basal body rod protein CFI11_RS00445 PF07559 Flagellar basal body protein FlaE CFI11_RS00450 PF13677 Membrane MotB of proton-channel complex MotA/MotB CFI11_RS00450 PF00691 OmpA family CFI11_RS00455 PF00813 FliP family CFI11_RS00460 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CFI11_RS00470 PF01514 Secretory protein of YscJ/FliF family CFI11_RS00470 PF08345 Flagellar M-ring protein C-terminal CFI11_RS00490 PF01618 MotA/TolQ/ExbB proton channel family CFI11_RS00505 PF00771 FHIPEP family CFI11_RS00515 PF01312 FlhB HrpN YscU SpaS Family CFI11_RS00530 PF02107 Flagellar L-ring protein CFI11_RS00540 PF00460 Flagella basal body rod protein CFI11_RS00540 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CFI11_RS00545 PF00460 Flagella basal body rod protein CFI11_RS00545 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CFI11_RS00550 PF01313 Bacterial export proteins, family 3 CFI11_RS00555 PF02049 Flagellar hook-basal body complex protein FliE CFI11_RS00560 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CFI11_RS00570 PF18269 T3SS EscN ATPase C-terminal domain CFI11_RS00570 PF02874 ATP synthase alpha/beta family, beta-barrel domain CFI11_RS00570 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CFI11_RS00580 PF07378 Flagellar protein FlbT CFI11_RS00590 PF00669 Bacterial flagellin N-terminal helical region CFI11_RS00590 PF00700 Bacterial flagellin C-terminal helical region CFI11_RS00610 PF13860 FlgD Ig-like domain CFI11_RS00610 PF03963 Flagellar hook capping protein - N-terminal region CFI11_RS00610 PF13861 FlgD Tudor-like domain CFI11_RS00615 PF01266 FAD dependent oxidoreductase CFI11_RS00620 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS00625 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS00630 PF00005 ABC transporter CFI11_RS00630 PF08402 TOBE domain CFI11_RS00635 PF13416 Bacterial extracellular solute-binding protein CFI11_RS00640 PF00392 Bacterial regulatory proteins, gntR family CFI11_RS00640 PF07729 FCD domain CFI11_RS00645 PF00202 Aminotransferase class-III CFI11_RS00650 PF08402 TOBE domain CFI11_RS00650 PF00005 ABC transporter CFI11_RS00660 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS00665 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS00675 PF13406 Transglycosylase SLT domain CFI11_RS00680 PF08279 HTH domain CFI11_RS00680 PF13280 WYL domain CFI11_RS00700 PF00743 Flavin-binding monooxygenase-like CFI11_RS00705 PF00685 Sulfotransferase domain CFI11_RS00725 PF01063 Amino-transferase class IV CFI11_RS00730 PF12802 MarR family CFI11_RS00735 PF00072 Response regulator receiver domain CFI11_RS00735 PF00486 Transcriptional regulatory protein, C terminal CFI11_RS00740 PF00850 Histone deacetylase domain CFI11_RS00745 PF02609 Exonuclease VII small subunit CFI11_RS00750 PF00348 Polyprenyl synthetase CFI11_RS00755 PF02780 Transketolase, C-terminal domain CFI11_RS00755 PF02779 Transketolase, pyrimidine binding domain CFI11_RS00755 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CFI11_RS00775 PF05138 Phenylacetic acid catabolic protein CFI11_RS00780 PF06243 Phenylacetic acid degradation B CFI11_RS00785 PF05138 Phenylacetic acid catabolic protein CFI11_RS00790 PF01883 Iron-sulfur cluster assembly protein CFI11_RS00800 PF00970 Oxidoreductase FAD-binding domain CFI11_RS00800 PF00175 Oxidoreductase NAD-binding domain CFI11_RS00800 PF00111 2Fe-2S iron-sulfur cluster binding domain CFI11_RS00810 PF00378 Enoyl-CoA hydratase/isomerase CFI11_RS00820 PF02770 Acyl-CoA dehydrogenase, middle domain CFI11_RS00820 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CFI11_RS00820 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CFI11_RS00825 PF00596 Class II Aldolase and Adducin N-terminal domain CFI11_RS00825 PF01008 Initiation factor 2 subunit family CFI11_RS00840 PF03960 ArsC family CFI11_RS00845 PF13382 Adenine deaminase C-terminal domain CFI11_RS00845 PF01979 Amidohydrolase family CFI11_RS00850 PF01048 Phosphorylase superfamily CFI11_RS00850 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus CFI11_RS00875 PF01965 DJ-1/PfpI family CFI11_RS00875 PF12833 Helix-turn-helix domain CFI11_RS00890 PF00005 ABC transporter CFI11_RS00890 PF00664 ABC transporter transmembrane region CFI11_RS00895 PF00255 Glutathione peroxidase CFI11_RS00900 PF01641 SelR domain CFI11_RS00905 PF01625 Peptide methionine sulfoxide reductase CFI11_RS00915 PF12557 Cob(I)alamin adenosyltransferase N terminal CFI11_RS00915 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP CFI11_RS00920 PF00892 EamA-like transporter family CFI11_RS00945 PF00266 Aminotransferase class-V CFI11_RS00950 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CFI11_RS00950 PF01842 ACT domain CFI11_RS00950 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CFI11_RS00955 PF00149 Calcineurin-like phosphoesterase CFI11_RS00960 PF00291 Pyridoxal-phosphate dependent enzyme CFI11_RS00965 PF08240 Alcohol dehydrogenase GroES-like domain CFI11_RS00965 PF00107 Zinc-binding dehydrogenase CFI11_RS00970 PF00155 Aminotransferase class I and II CFI11_RS00975 PF07883 Cupin domain CFI11_RS00975 PF01381 Helix-turn-helix CFI11_RS00980 PF02803 Thiolase, C-terminal domain CFI11_RS00980 PF00108 Thiolase, N-terminal domain CFI11_RS00985 PF03109 ABC1 family CFI11_RS00990 PF01209 ubiE/COQ5 methyltransferase family CFI11_RS00995 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CFI11_RS00995 PF06827 Zinc finger found in FPG and IleRS CFI11_RS00995 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CFI11_RS01000 PF00378 Enoyl-CoA hydratase/isomerase CFI11_RS01005 PF01649 Ribosomal protein S20 CFI11_RS01010 PF00308 Bacterial dnaA protein CFI11_RS01010 PF08299 Bacterial dnaA protein helix-turn-helix CFI11_RS01010 PF11638 DnaA N-terminal domain CFI11_RS01015 PF02767 DNA polymerase III beta subunit, central domain CFI11_RS01015 PF00712 DNA polymerase III beta subunit, N-terminal domain CFI11_RS01015 PF02768 DNA polymerase III beta subunit, C-terminal domain CFI11_RS01020 PF02463 RecF/RecN/SMC N terminal domain CFI11_RS01025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFI11_RS01025 PF01751 Toprim domain CFI11_RS01025 PF00204 DNA gyrase B CFI11_RS01025 PF00986 DNA gyrase B subunit, carboxyl terminus CFI11_RS01030 PF00535 Glycosyl transferase family 2 CFI11_RS01040 PF01370 NAD dependent epimerase/dehydratase family CFI11_RS01045 PF08484 C-methyltransferase C-terminal domain CFI11_RS01045 PF08421 Putative zinc binding domain CFI11_RS01050 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CFI11_RS01055 PF16363 GDP-mannose 4,6 dehydratase CFI11_RS01060 PF00483 Nucleotidyl transferase CFI11_RS01065 PF17773 UPF0176 acylphosphatase like domain CFI11_RS01065 PF00581 Rhodanese-like domain CFI11_RS01075 PF00857 Isochorismatase family CFI11_RS01080 PF00072 Response regulator receiver domain CFI11_RS01080 PF00512 His Kinase A (phospho-acceptor) domain CFI11_RS01080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFI11_RS01080 PF09308 LuxQ, periplasmic CFI11_RS01085 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CFI11_RS01085 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CFI11_RS01090 PF00472 RF-1 domain CFI11_RS01095 PF02592 Putative vitamin uptake transporter CFI11_RS01105 PF03411 Penicillin-insensitive murein endopeptidase CFI11_RS01125 PF09382 RQC domain CFI11_RS01125 PF00570 HRDC domain CFI11_RS01125 PF00271 Helicase conserved C-terminal domain CFI11_RS01125 PF16124 RecQ zinc-binding CFI11_RS01125 PF00270 DEAD/DEAH box helicase CFI11_RS01130 PF03883 Peroxide stress protein YaaA CFI11_RS01135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFI11_RS01135 PF00512 His Kinase A (phospho-acceptor) domain CFI11_RS01135 PF01627 Hpt domain CFI11_RS01135 PF00672 HAMP domain CFI11_RS01135 PF00072 Response regulator receiver domain CFI11_RS01135 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CFI11_RS01140 PF07678 A-macroglobulin TED domain CFI11_RS01140 PF01835 MG2 domain CFI11_RS01140 PF17962 Bacterial macroglobulin domain 6 CFI11_RS01140 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain CFI11_RS01140 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain CFI11_RS01140 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain CFI11_RS01140 PF11974 Bacterial alpha-2-macroglobulin MG3 domain CFI11_RS01140 PF07703 Alpha-2-macroglobulin bait region domain CFI11_RS01140 PF00207 Alpha-2-macroglobulin family CFI11_RS01145 PF00905 Penicillin binding protein transpeptidase domain CFI11_RS01145 PF00912 Transglycosylase CFI11_RS01145 PF06832 Penicillin-Binding Protein C-terminus Family CFI11_RS01175 PF07726 ATPase family associated with various cellular activities (AAA) CFI11_RS01175 PF17863 AAA lid domain CFI11_RS01205 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CFI11_RS01205 PF01612 3'-5' exonuclease CFI11_RS01205 PF01367 5'-3' exonuclease, C-terminal SAM fold CFI11_RS01205 PF00476 DNA polymerase family A CFI11_RS01220 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CFI11_RS01235 PF00005 ABC transporter CFI11_RS01245 PF01676 Metalloenzyme superfamily CFI11_RS01245 PF06415 BPG-independent PGAM N-terminus (iPGM_N) CFI11_RS01255 PF13180 PDZ domain CFI11_RS01255 PF03572 Peptidase family S41 CFI11_RS01265 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CFI11_RS01270 PF02685 Glucokinase CFI11_RS01275 PF01081 KDPG and KHG aldolase CFI11_RS01280 PF00920 Dehydratase family CFI11_RS01300 PF00920 Dehydratase family CFI11_RS01305 PF03412 Peptidase C39 family CFI11_RS01305 PF00664 ABC transporter transmembrane region CFI11_RS01305 PF00005 ABC transporter CFI11_RS01310 PF02517 CPBP intramembrane metalloprotease CFI11_RS01315 PF17848 Acetyl-coA carboxylase zinc finger domain CFI11_RS01315 PF01039 Carboxyl transferase domain CFI11_RS01320 PF02875 Mur ligase family, glutamate ligase domain CFI11_RS01320 PF08245 Mur ligase middle domain CFI11_RS01325 PF03969 AFG1-like ATPase CFI11_RS01335 PF02423 Ornithine cyclodeaminase/mu-crystallin family CFI11_RS01345 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 CFI11_RS01350 PF00756 Putative esterase CFI11_RS01355 PF03547 Membrane transport protein CFI11_RS01365 PF18665 Tetracyclin repressor-like, C-terminal domain CFI11_RS01365 PF00440 Bacterial regulatory proteins, tetR family CFI11_RS01375 PF08240 Alcohol dehydrogenase GroES-like domain CFI11_RS01375 PF00107 Zinc-binding dehydrogenase CFI11_RS01380 PF07690 Major Facilitator Superfamily CFI11_RS01385 PF14579 Helix-hairpin-helix motif CFI11_RS01385 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CFI11_RS01385 PF07733 Bacterial DNA polymerase III alpha NTPase domain CFI11_RS01385 PF01336 OB-fold nucleic acid binding domain CFI11_RS01385 PF02811 PHP domain CFI11_RS01410 PF00501 AMP-binding enzyme CFI11_RS01410 PF14535 AMP-binding enzyme C-terminal domain CFI11_RS01415 PF00108 Thiolase, N-terminal domain CFI11_RS01415 PF02803 Thiolase, C-terminal domain CFI11_RS01420 PF03061 Thioesterase superfamily CFI11_RS01425 PF00171 Aldehyde dehydrogenase family CFI11_RS01425 PF01575 MaoC like domain CFI11_RS01430 PF07848 PaaX-like protein CFI11_RS01430 PF08223 PaaX-like protein C-terminal domain CFI11_RS01435 PF13581 Histidine kinase-like ATPase domain CFI11_RS01460 PF00111 2Fe-2S iron-sulfur cluster binding domain CFI11_RS01460 PF01799 [2Fe-2S] binding domain CFI11_RS01465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFI11_RS01465 PF03466 LysR substrate binding domain CFI11_RS01480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFI11_RS01480 PF03466 LysR substrate binding domain CFI11_RS01485 PF00583 Acetyltransferase (GNAT) family CFI11_RS01495 PF00501 AMP-binding enzyme CFI11_RS01495 PF13193 AMP-binding enzyme C-terminal domain CFI11_RS01505 PF06339 Ectoine synthase CFI11_RS01510 PF00202 Aminotransferase class-III CFI11_RS01515 PF00696 Amino acid kinase family CFI11_RS01515 PF13840 ACT domain CFI11_RS01520 PF17645 Arylmalonate decarboxylase CFI11_RS01530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFI11_RS01530 PF03466 LysR substrate binding domain CFI11_RS01535 PF07690 Major Facilitator Superfamily CFI11_RS01540 PF00440 Bacterial regulatory proteins, tetR family CFI11_RS01540 PF02909 Tetracyclin repressor-like, C-terminal domain CFI11_RS01550 PF00877 NlpC/P60 family CFI11_RS01555 PF02789 Cytosol aminopeptidase family, N-terminal domain CFI11_RS01555 PF00883 Cytosol aminopeptidase family, catalytic domain CFI11_RS01565 PF00484 Carbonic anhydrase CFI11_RS01575 PF01118 Semialdehyde dehydrogenase, NAD binding domain CFI11_RS01575 PF02774 Semialdehyde dehydrogenase, dimerisation domain CFI11_RS01585 PF03328 HpcH/HpaI aldolase/citrate lyase family CFI11_RS01590 PF01557 Fumarylacetoacetate (FAA) hydrolase family CFI11_RS01595 PF01557 Fumarylacetoacetate (FAA) hydrolase family CFI11_RS01600 PF00282 Pyridoxal-dependent decarboxylase conserved domain CFI11_RS01605 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CFI11_RS01610 PF00171 Aldehyde dehydrogenase family CFI11_RS01620 PF01047 MarR family CFI11_RS01625 PF14403 Circularly permuted ATP-grasp type 2 CFI11_RS01635 PF08379 Bacterial transglutaminase-like N-terminal region CFI11_RS01635 PF01841 Transglutaminase-like superfamily CFI11_RS01650 PF01197 Ribosomal protein L31 CFI11_RS01655 PF01245 Ribosomal protein L19 CFI11_RS01660 PF01746 tRNA (Guanine-1)-methyltransferase CFI11_RS01665 PF05239 PRC-barrel domain CFI11_RS01665 PF01782 RimM N-terminal domain CFI11_RS01670 PF00881 Nitroreductase family CFI11_RS01675 PF00886 Ribosomal protein S16 CFI11_RS01710 PF00448 SRP54-type protein, GTPase domain CFI11_RS01710 PF02978 Signal peptide binding domain CFI11_RS01710 PF02881 SRP54-type protein, helical bundle domain CFI11_RS01730 PF00753 Metallo-beta-lactamase superfamily CFI11_RS01755 PF00180 Isocitrate/isopropylmalate dehydrogenase CFI11_RS01760 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CFI11_RS01760 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CFI11_RS01765 PF07729 FCD domain CFI11_RS01765 PF00392 Bacterial regulatory proteins, gntR family CFI11_RS01770 PF07722 Peptidase C26 CFI11_RS01780 PF05532 CsbD-like CFI11_RS01785 PF07568 Histidine kinase CFI11_RS01785 PF12282 Signal transduction histidine kinase CFI11_RS01785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFI11_RS01790 PF08281 Sigma-70, region 4 CFI11_RS01790 PF04542 Sigma-70 region 2 CFI11_RS01795 PF00072 Response regulator receiver domain CFI11_RS01800 PF00210 Ferritin-like domain CFI11_RS01810 PF13545 Crp-like helix-turn-helix domain CFI11_RS01810 PF00027 Cyclic nucleotide-binding domain CFI11_RS01815 PF03631 Virulence factor BrkB CFI11_RS01825 PF01738 Dienelactone hydrolase family CFI11_RS01830 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CFI11_RS01835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFI11_RS01835 PF03466 LysR substrate binding domain CFI11_RS01840 PF01226 Formate/nitrite transporter CFI11_RS01845 PF00296 Luciferase-like monooxygenase CFI11_RS01855 PF02525 Flavodoxin-like fold CFI11_RS01885 PF03466 LysR substrate binding domain CFI11_RS01885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFI11_RS01890 PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter CFI11_RS01895 PF00119 ATP synthase A chain CFI11_RS01900 PF00137 ATP synthase subunit C CFI11_RS01905 PF00430 ATP synthase B/B' CF(0) CFI11_RS01910 PF00430 ATP synthase B/B' CF(0) CFI11_RS01915 PF00005 ABC transporter CFI11_RS01920 PF07729 FCD domain CFI11_RS01920 PF00392 Bacterial regulatory proteins, gntR family CFI11_RS01930 PF02463 RecF/RecN/SMC N terminal domain CFI11_RS01945 PF03186 CobD/Cbib protein CFI11_RS01950 PF00155 Aminotransferase class I and II CFI11_RS01960 PF13409 Glutathione S-transferase, N-terminal domain CFI11_RS01975 PF00155 Aminotransferase class I and II CFI11_RS01980 PF01327 Polypeptide deformylase CFI11_RS01985 PF01327 Polypeptide deformylase CFI11_RS01990 PF01327 Polypeptide deformylase CFI11_RS01995 PF00551 Formyl transferase CFI11_RS01995 PF02911 Formyl transferase, C-terminal domain CFI11_RS02005 PF00075 RNase H CFI11_RS02025 PF01810 LysE type translocator CFI11_RS02030 PF02401 LytB protein CFI11_RS02040 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CFI11_RS02045 PF01192 RNA polymerase Rpb6 CFI11_RS02050 PF04607 Region found in RelA / SpoT proteins CFI11_RS02050 PF13291 ACT domain CFI11_RS02050 PF02824 TGS domain CFI11_RS02060 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ CFI11_RS02065 PF01810 LysE type translocator CFI11_RS02075 PF01648 4'-phosphopantetheinyl transferase superfamily CFI11_RS02080 PF10502 Signal peptidase, peptidase S26 CFI11_RS02085 PF00035 Double-stranded RNA binding motif CFI11_RS02085 PF14622 Ribonuclease-III-like CFI11_RS02090 PF01926 50S ribosome-binding GTPase CFI11_RS02090 PF07650 KH domain CFI11_RS02100 PF02565 Recombination protein O C terminal CFI11_RS02100 PF11967 Recombination protein O N terminal CFI11_RS02120 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CFI11_RS02120 PF02770 Acyl-CoA dehydrogenase, middle domain CFI11_RS02120 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CFI11_RS02130 PF14824 Sirohaem biosynthesis protein central CFI11_RS02130 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CFI11_RS02130 PF10414 Sirohaem synthase dimerisation region CFI11_RS02135 PF02885 Glycosyl transferase family, helical bundle domain CFI11_RS02135 PF00591 Glycosyl transferase family, a/b domain CFI11_RS02140 PF00384 Molybdopterin oxidoreductase CFI11_RS02140 PF01568 Molydopterin dinucleotide binding domain CFI11_RS02140 PF04324 BFD-like [2Fe-2S] binding domain CFI11_RS02140 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CFI11_RS02145 PF00355 Rieske [2Fe-2S] domain CFI11_RS02150 PF18267 Rubredoxin NAD+ reductase C-terminal domain CFI11_RS02150 PF07992 Pyridine nucleotide-disulphide oxidoreductase CFI11_RS02150 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CFI11_RS02150 PF04324 BFD-like [2Fe-2S] binding domain CFI11_RS02150 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CFI11_RS02155 PF00005 ABC transporter CFI11_RS02160 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS02175 PF00005 ABC transporter CFI11_RS02180 PF08376 Nitrate and nitrite sensing CFI11_RS02180 PF03861 ANTAR domain CFI11_RS02185 PF01293 Phosphoenolpyruvate carboxykinase CFI11_RS02190 PF00072 Response regulator receiver domain CFI11_RS02190 PF00486 Transcriptional regulatory protein, C terminal CFI11_RS02195 PF00672 HAMP domain CFI11_RS02195 PF00512 His Kinase A (phospho-acceptor) domain CFI11_RS02195 PF13755 Sensor N-terminal transmembrane domain CFI11_RS02195 PF13756 Stimulus-sensing domain CFI11_RS02195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFI11_RS02200 PF07475 HPr Serine kinase C-terminal domain CFI11_RS02200 PF02603 HPr Serine kinase N terminus CFI11_RS02205 PF03668 P-loop ATPase protein family CFI11_RS02210 PF03830 PTS system sorbose subfamily IIB component CFI11_RS02210 PF03610 PTS system fructose IIA component CFI11_RS02215 PF00381 PTS HPr component phosphorylation site CFI11_RS02225 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CFI11_RS02225 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CFI11_RS02235 PF01012 Electron transfer flavoprotein domain CFI11_RS02235 PF00766 Electron transfer flavoprotein FAD-binding domain CFI11_RS02240 PF01012 Electron transfer flavoprotein domain CFI11_RS02245 PF01923 Cobalamin adenosyltransferase CFI11_RS02255 PF00106 short chain dehydrogenase CFI11_RS02265 PF00521 DNA gyrase/topoisomerase IV, subunit A CFI11_RS02265 PF03989 DNA gyrase C-terminal domain, beta-propeller CFI11_RS02270 PF00067 Cytochrome P450 CFI11_RS02280 PF03144 Elongation factor Tu domain 2 CFI11_RS02280 PF00009 Elongation factor Tu GTP binding domain CFI11_RS02280 PF03143 Elongation factor Tu C-terminal domain CFI11_RS02295 PF00132 Bacterial transferase hexapeptide (six repeats) CFI11_RS02305 PF02515 CoA-transferase family III CFI11_RS02370 PF03852 DNA mismatch endonuclease Vsr CFI11_RS02375 PF00145 C-5 cytosine-specific DNA methylase CFI11_RS02400 PF02899 Phage integrase, N-terminal SAM-like domain CFI11_RS02400 PF00589 Phage integrase family CFI11_RS02440 PF02661 Fic/DOC family CFI11_RS02465 PF00467 KOW motif CFI11_RS02465 PF02357 Transcription termination factor nusG CFI11_RS02470 PF03946 Ribosomal protein L11, N-terminal domain CFI11_RS02470 PF00298 Ribosomal protein L11, RNA binding domain CFI11_RS02475 PF00687 Ribosomal protein L1p/L10e family CFI11_RS02480 PF00466 Ribosomal protein L10 CFI11_RS02485 PF00542 Ribosomal protein L7/L12 C-terminal domain CFI11_RS02485 PF16320 Ribosomal protein L7/L12 dimerisation domain CFI11_RS02490 PF04561 RNA polymerase Rpb2, domain 2 CFI11_RS02490 PF04563 RNA polymerase beta subunit CFI11_RS02490 PF10385 RNA polymerase beta subunit external 1 domain CFI11_RS02490 PF00562 RNA polymerase Rpb2, domain 6 CFI11_RS02490 PF04560 RNA polymerase Rpb2, domain 7 CFI11_RS02490 PF04565 RNA polymerase Rpb2, domain 3 CFI11_RS02495 PF05000 RNA polymerase Rpb1, domain 4 CFI11_RS02495 PF04997 RNA polymerase Rpb1, domain 1 CFI11_RS02495 PF04983 RNA polymerase Rpb1, domain 3 CFI11_RS02495 PF00623 RNA polymerase Rpb1, domain 2 CFI11_RS02495 PF04998 RNA polymerase Rpb1, domain 5 CFI11_RS02500 PF12911 N-terminal TM domain of oligopeptide transport permease C CFI11_RS02500 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS02505 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS02510 PF00005 ABC transporter CFI11_RS02510 PF08402 TOBE domain CFI11_RS02515 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CFI11_RS02515 PF00005 ABC transporter CFI11_RS02555 PF00164 Ribosomal protein S12/S23 CFI11_RS02560 PF00177 Ribosomal protein S7p/S5e CFI11_RS02565 PF03144 Elongation factor Tu domain 2 CFI11_RS02565 PF14492 Elongation Factor G, domain II CFI11_RS02565 PF03764 Elongation factor G, domain IV CFI11_RS02565 PF00009 Elongation factor Tu GTP binding domain CFI11_RS02565 PF00679 Elongation factor G C-terminus CFI11_RS02575 PF00009 Elongation factor Tu GTP binding domain CFI11_RS02575 PF03143 Elongation factor Tu C-terminal domain CFI11_RS02575 PF03144 Elongation factor Tu domain 2 CFI11_RS02580 PF00338 Ribosomal protein S10p/S20e CFI11_RS02585 PF00297 Ribosomal protein L3 CFI11_RS02590 PF00573 Ribosomal protein L4/L1 family CFI11_RS02595 PF00276 Ribosomal protein L23 CFI11_RS02605 PF00181 Ribosomal Proteins L2, RNA binding domain CFI11_RS02605 PF03947 Ribosomal Proteins L2, C-terminal domain CFI11_RS02610 PF00203 Ribosomal protein S19 CFI11_RS02615 PF00237 Ribosomal protein L22p/L17e CFI11_RS02620 PF07650 KH domain CFI11_RS02620 PF00189 Ribosomal protein S3, C-terminal domain CFI11_RS02625 PF00252 Ribosomal protein L16p/L10e CFI11_RS02635 PF00831 Ribosomal L29 protein CFI11_RS02640 PF00366 Ribosomal protein S17 CFI11_RS02645 PF00238 Ribosomal protein L14p/L23e CFI11_RS02650 PF00467 KOW motif CFI11_RS02650 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CFI11_RS02655 PF00281 Ribosomal protein L5 CFI11_RS02655 PF00673 ribosomal L5P family C-terminus CFI11_RS02660 PF00253 Ribosomal protein S14p/S29e CFI11_RS02665 PF00410 Ribosomal protein S8 CFI11_RS02670 PF00347 Ribosomal protein L6 CFI11_RS02675 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CFI11_RS02680 PF03719 Ribosomal protein S5, C-terminal domain CFI11_RS02680 PF00333 Ribosomal protein S5, N-terminal domain CFI11_RS02685 PF00327 Ribosomal protein L30p/L7e CFI11_RS02690 PF00211 Adenylate and Guanylate cyclase catalytic domain CFI11_RS02690 PF00672 HAMP domain CFI11_RS02695 PF01323 DSBA-like thioredoxin domain CFI11_RS02705 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CFI11_RS02710 PF00344 SecY translocase CFI11_RS02720 PF00416 Ribosomal protein S13/S18 CFI11_RS02725 PF00411 Ribosomal protein S11 CFI11_RS02730 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CFI11_RS02730 PF01000 RNA polymerase Rpb3/RpoA insert domain CFI11_RS02730 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CFI11_RS02735 PF01196 Ribosomal protein L17 CFI11_RS02740 PF13180 PDZ domain CFI11_RS02745 PF00004 ATPase family associated with various cellular activities (AAA) CFI11_RS02745 PF16193 AAA C-terminal domain CFI11_RS02745 PF12002 MgsA AAA+ ATPase C terminal CFI11_RS02750 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CFI11_RS02755 PF01479 S4 domain CFI11_RS02755 PF00849 RNA pseudouridylate synthase CFI11_RS02760 PF13419 Haloacid dehalogenase-like hydrolase CFI11_RS02770 PF00497 Bacterial extracellular solute-binding proteins, family 3 CFI11_RS02775 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS02780 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS02785 PF00005 ABC transporter CFI11_RS02805 PF00696 Amino acid kinase family CFI11_RS02810 PF01926 50S ribosome-binding GTPase CFI11_RS02820 PF02096 60Kd inner membrane protein CFI11_RS02820 PF14849 YidC periplasmic domain CFI11_RS02825 PF00563 EAL domain CFI11_RS02825 PF12792 CSS motif domain associated with EAL CFI11_RS02830 PF01171 PP-loop family CFI11_RS02845 PF01809 Putative membrane protein insertion efficiency factor CFI11_RS02850 PF00825 Ribonuclease P CFI11_RS02855 PF00468 Ribosomal protein L34 CFI11_RS02865 PF07992 Pyridine nucleotide-disulphide oxidoreductase CFI11_RS02865 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CFI11_RS02865 PF00403 Heavy-metal-associated domain CFI11_RS02870 PF00989 PAS fold CFI11_RS02870 PF00512 His Kinase A (phospho-acceptor) domain CFI11_RS02870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFI11_RS02880 PF03737 Aldolase/RraA CFI11_RS02885 PF00596 Class II Aldolase and Adducin N-terminal domain CFI11_RS02890 PF07005 Sugar-binding N-terminal domain CFI11_RS02890 PF17042 Nucleotide-binding C-terminal domain CFI11_RS02900 PF00180 Isocitrate/isopropylmalate dehydrogenase CFI11_RS02915 PF01970 Tripartite tricarboxylate transporter TctA family CFI11_RS02920 PF00392 Bacterial regulatory proteins, gntR family CFI11_RS02920 PF07729 FCD domain CFI11_RS02925 PF02142 MGS-like domain CFI11_RS02970 PF00005 ABC transporter CFI11_RS02970 PF12704 MacB-like periplasmic core domain CFI11_RS02970 PF02687 FtsX-like permease family CFI11_RS03000 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS03005 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS03010 PF00005 ABC transporter CFI11_RS03010 PF17912 MalK OB fold domain CFI11_RS03055 PF00005 ABC transporter CFI11_RS03060 PF01032 FecCD transport family CFI11_RS03070 PF00593 TonB dependent receptor CFI11_RS03070 PF07715 TonB-dependent Receptor Plug Domain CFI11_RS03110 PF13296 Putative type VI secretion system Rhs element Vgr CFI11_RS03110 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) CFI11_RS03110 PF04717 Type VI secretion system, phage-baseplate injector CFI11_RS03125 PF13416 Bacterial extracellular solute-binding protein CFI11_RS03130 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS03135 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS03140 PF00005 ABC transporter CFI11_RS03140 PF08402 TOBE domain CFI11_RS03145 PF01546 Peptidase family M20/M25/M40 CFI11_RS03145 PF07687 Peptidase dimerisation domain CFI11_RS03150 PF07992 Pyridine nucleotide-disulphide oxidoreductase CFI11_RS03150 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CFI11_RS03155 PF03466 LysR substrate binding domain CFI11_RS03155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFI11_RS03165 PF01042 Endoribonuclease L-PSP CFI11_RS03180 PF03466 LysR substrate binding domain CFI11_RS03180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFI11_RS03185 PF10417 C-terminal domain of 1-Cys peroxiredoxin CFI11_RS03185 PF00578 AhpC/TSA family CFI11_RS03200 PF04143 Sulphur transport CFI11_RS03210 PF00753 Metallo-beta-lactamase superfamily CFI11_RS03220 PF00916 Sulfate permease family CFI11_RS03220 PF01740 STAS domain CFI11_RS03225 PF00392 Bacterial regulatory proteins, gntR family CFI11_RS03225 PF07729 FCD domain CFI11_RS03230 PF03480 Bacterial extracellular solute-binding protein, family 7 CFI11_RS03240 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CFI11_RS03250 PF13193 AMP-binding enzyme C-terminal domain CFI11_RS03250 PF00501 AMP-binding enzyme CFI11_RS03275 PF02424 ApbE family CFI11_RS03280 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) CFI11_RS03280 PF11973 NQRA C-terminal domain CFI11_RS03285 PF03116 NQR2, RnfD, RnfE family CFI11_RS03290 PF04205 FMN-binding domain CFI11_RS03295 PF02508 Rnf-Nqr subunit, membrane protein CFI11_RS03300 PF02508 Rnf-Nqr subunit, membrane protein CFI11_RS03305 PF00175 Oxidoreductase NAD-binding domain CFI11_RS03305 PF00970 Oxidoreductase FAD-binding domain CFI11_RS03305 PF00111 2Fe-2S iron-sulfur cluster binding domain CFI11_RS03315 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CFI11_RS03315 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CFI11_RS03320 PF08450 SMP-30/Gluconolactonase/LRE-like region CFI11_RS03325 PF02653 Branched-chain amino acid transport system / permease component CFI11_RS03330 PF02653 Branched-chain amino acid transport system / permease component CFI11_RS03335 PF00005 ABC transporter CFI11_RS03340 PF13407 Periplasmic binding protein domain CFI11_RS03345 PF00356 Bacterial regulatory proteins, lacI family CFI11_RS03345 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CFI11_RS03355 PF03209 PUCC protein CFI11_RS03360 PF00556 Antenna complex alpha/beta subunit CFI11_RS03365 PF00556 Antenna complex alpha/beta subunit CFI11_RS03370 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CFI11_RS03375 PF01098 Cell cycle protein CFI11_RS03380 PF03717 Penicillin-binding Protein dimerisation domain CFI11_RS03380 PF00905 Penicillin binding protein transpeptidase domain CFI11_RS03390 PF04085 rod shape-determining protein MreC CFI11_RS03400 PF01494 FAD binding domain CFI11_RS03410 PF02540 NAD synthase CFI11_RS03410 PF00795 Carbon-nitrogen hydrolase CFI11_RS03425 PF01266 FAD dependent oxidoreductase CFI11_RS03445 PF00749 tRNA synthetases class I (E and Q), catalytic domain CFI11_RS03450 PF01554 MatE CFI11_RS03460 PF02082 Transcriptional regulator CFI11_RS03470 PF00005 ABC transporter CFI11_RS03475 PF13472 GDSL-like Lipase/Acylhydrolase family CFI11_RS03485 PF00313 'Cold-shock' DNA-binding domain CFI11_RS03500 PF17969 L,D-transpeptidase C-terminal domain CFI11_RS03500 PF03734 L,D-transpeptidase catalytic domain CFI11_RS03510 PF03150 Di-haem cytochrome c peroxidase CFI11_RS03510 PF00034 Cytochrome c CFI11_RS03520 PF00005 ABC transporter CFI11_RS03520 PF12848 ABC transporter CFI11_RS03525 PF01467 Cytidylyltransferase-like CFI11_RS03540 PF01921 tRNA synthetases class I (K) CFI11_RS03565 PF13614 AAA domain CFI11_RS03585 PF00582 Universal stress protein family CFI11_RS03595 PF12344 Ultra-violet resistance protein B CFI11_RS03595 PF02151 UvrB/uvrC motif CFI11_RS03595 PF00271 Helicase conserved C-terminal domain CFI11_RS03595 PF17757 UvrB interaction domain CFI11_RS03595 PF04851 Type III restriction enzyme, res subunit CFI11_RS03605 PF00583 Acetyltransferase (GNAT) family CFI11_RS03620 PF13404 AsnC-type helix-turn-helix domain CFI11_RS03620 PF01037 Lrp/AsnC ligand binding domain CFI11_RS03625 PF07969 Amidohydrolase family CFI11_RS03630 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS03635 PF12911 N-terminal TM domain of oligopeptide transport permease C CFI11_RS03635 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS03640 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CFI11_RS03645 PF01979 Amidohydrolase family CFI11_RS03650 PF00005 ABC transporter CFI11_RS03650 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CFI11_RS03655 PF00005 ABC transporter CFI11_RS03655 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CFI11_RS03660 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CFI11_RS03660 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CFI11_RS03665 PF00497 Bacterial extracellular solute-binding proteins, family 3 CFI11_RS03670 PF00005 ABC transporter CFI11_RS03675 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS03680 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS03685 PF00795 Carbon-nitrogen hydrolase CFI11_RS03690 PF01613 Flavin reductase like domain CFI11_RS03695 PF00701 Dihydrodipicolinate synthetase family CFI11_RS03705 PF01979 Amidohydrolase family CFI11_RS03705 PF00449 Urease alpha-subunit, N-terminal domain CFI11_RS03710 PF01177 Asp/Glu/Hydantoin racemase CFI11_RS03715 PF03466 LysR substrate binding domain CFI11_RS03715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFI11_RS03725 PF00115 Cytochrome C and Quinol oxidase polypeptide I CFI11_RS03740 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CFI11_RS03740 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP CFI11_RS03745 PF03466 LysR substrate binding domain CFI11_RS03745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFI11_RS03750 PF12801 4Fe-4S binding domain CFI11_RS03750 PF13746 4Fe-4S dicluster domain CFI11_RS03750 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase CFI11_RS03760 PF00403 Heavy-metal-associated domain CFI11_RS03765 PF03597 Cytochrome oxidase maturation protein cbb3-type CFI11_RS03770 PF00768 D-alanyl-D-alanine carboxypeptidase CFI11_RS03770 PF07943 Penicillin-binding protein 5, C-terminal domain CFI11_RS03775 PF00005 ABC transporter CFI11_RS03775 PF12848 ABC transporter CFI11_RS03785 PF02617 ATP-dependent Clp protease adaptor protein ClpS CFI11_RS03790 PF05175 Methyltransferase small domain CFI11_RS03790 PF08468 Methyltransferase small domain N-terminal CFI11_RS03800 PF01218 Coproporphyrinogen III oxidase CFI11_RS03815 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CFI11_RS03815 PF03900 Porphobilinogen deaminase, C-terminal domain CFI11_RS03820 PF01208 Uroporphyrinogen decarboxylase (URO-D) CFI11_RS03830 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CFI11_RS03840 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CFI11_RS03840 PF14824 Sirohaem biosynthesis protein central CFI11_RS03840 PF10414 Sirohaem synthase dimerisation region CFI11_RS03845 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CFI11_RS03845 PF07685 CobB/CobQ-like glutamine amidotransferase domain CFI11_RS03850 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CFI11_RS03860 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CFI11_RS03865 PF02571 Precorrin-6x reductase CbiJ/CobK CFI11_RS03870 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CFI11_RS03875 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CFI11_RS03880 PF02570 Precorrin-8X methylmutase CFI11_RS03885 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CFI11_RS03890 PF02514 CobN/Magnesium Chelatase CFI11_RS03895 PF07683 Cobalamin synthesis protein cobW C-terminal domain CFI11_RS03895 PF02492 CobW/HypB/UreG, nucleotide-binding domain CFI11_RS03915 PF00005 ABC transporter CFI11_RS03920 PF00501 AMP-binding enzyme CFI11_RS03925 PF00005 ABC transporter CFI11_RS03925 PF12399 Branched-chain amino acid ATP-binding cassette transporter CFI11_RS03935 PF02653 Branched-chain amino acid transport system / permease component CFI11_RS03940 PF02653 Branched-chain amino acid transport system / permease component CFI11_RS03950 PF00005 ABC transporter CFI11_RS03965 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS03970 PF02492 CobW/HypB/UreG, nucleotide-binding domain CFI11_RS03970 PF07683 Cobalamin synthesis protein cobW C-terminal domain CFI11_RS03975 PF07969 Amidohydrolase family CFI11_RS03980 PF03466 LysR substrate binding domain CFI11_RS03980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFI11_RS03985 PF00561 alpha/beta hydrolase fold CFI11_RS03990 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CFI11_RS03995 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS04000 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS04000 PF12911 N-terminal TM domain of oligopeptide transport permease C CFI11_RS04005 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CFI11_RS04005 PF00005 ABC transporter CFI11_RS04010 PF00005 ABC transporter CFI11_RS04010 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CFI11_RS04015 PF00444 Ribosomal protein L36 CFI11_RS04030 PF00817 impB/mucB/samB family CFI11_RS04030 PF11799 impB/mucB/samB family C-terminal domain CFI11_RS04040 PF00453 Ribosomal protein L20 CFI11_RS04045 PF01632 Ribosomal protein L35 CFI11_RS04055 PF02887 Pyruvate kinase, alpha/beta domain CFI11_RS04055 PF00224 Pyruvate kinase, barrel domain CFI11_RS04070 PF03328 HpcH/HpaI aldolase/citrate lyase family CFI11_RS04080 PF13378 Enolase C-terminal domain-like CFI11_RS04080 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CFI11_RS04085 PF01063 Amino-transferase class IV CFI11_RS04110 PF03449 Transcription elongation factor, N-terminal CFI11_RS04110 PF01272 Transcription elongation factor, GreA/GreB, C-term CFI11_RS04125 PF00376 MerR family regulatory protein CFI11_RS04125 PF09278 MerR, DNA binding CFI11_RS04145 PF08544 GHMP kinases C terminal CFI11_RS04150 PF00348 Polyprenyl synthetase CFI11_RS04175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFI11_RS04175 PF03466 LysR substrate binding domain CFI11_RS04185 PF00108 Thiolase, N-terminal domain CFI11_RS04185 PF02803 Thiolase, C-terminal domain CFI11_RS04195 PF03352 Methyladenine glycosylase CFI11_RS04205 PF04116 Fatty acid hydroxylase superfamily CFI11_RS04220 PF08534 Redoxin CFI11_RS04225 PF00206 Lyase CFI11_RS04225 PF14698 Argininosuccinate lyase C-terminal CFI11_RS04245 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CFI11_RS04245 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CFI11_RS04260 PF00005 ABC transporter CFI11_RS04280 PF02469 Fasciclin domain CFI11_RS04285 PF07992 Pyridine nucleotide-disulphide oxidoreductase CFI11_RS04285 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CFI11_RS04300 PF02817 e3 binding domain CFI11_RS04300 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CFI11_RS04300 PF00364 Biotin-requiring enzyme CFI11_RS04305 PF02779 Transketolase, pyrimidine binding domain CFI11_RS04305 PF16870 2-oxoglutarate dehydrogenase C-terminal CFI11_RS04305 PF00676 Dehydrogenase E1 component CFI11_RS04305 PF16078 2-oxoglutarate dehydrogenase N-terminus CFI11_RS04310 PF00549 CoA-ligase CFI11_RS04310 PF02629 CoA binding domain CFI11_RS04320 PF00549 CoA-ligase CFI11_RS04320 PF08442 ATP-grasp domain CFI11_RS04325 PF00211 Adenylate and Guanylate cyclase catalytic domain CFI11_RS04330 PF00056 lactate/malate dehydrogenase, NAD binding domain CFI11_RS04330 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CFI11_RS04345 PF03328 HpcH/HpaI aldolase/citrate lyase family CFI11_RS04360 PF01575 MaoC like domain CFI11_RS04370 PF03544 Gram-negative bacterial TonB protein C-terminal CFI11_RS04385 PF01618 MotA/TolQ/ExbB proton channel family CFI11_RS04400 PF05171 Haemin-degrading HemS.ChuX domain CFI11_RS04405 PF01497 Periplasmic binding protein CFI11_RS04410 PF01032 FecCD transport family CFI11_RS04415 PF00005 ABC transporter CFI11_RS04470 PF01037 Lrp/AsnC ligand binding domain CFI11_RS04480 PF00245 Alkaline phosphatase CFI11_RS04490 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CFI11_RS04495 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS04500 PF00005 ABC transporter CFI11_RS04535 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CFI11_RS04535 PF02770 Acyl-CoA dehydrogenase, middle domain CFI11_RS04535 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CFI11_RS04545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFI11_RS04545 PF03466 LysR substrate binding domain CFI11_RS04550 PF00893 Small Multidrug Resistance protein CFI11_RS04560 PF01694 Rhomboid family CFI11_RS04580 PF04199 Putative cyclase CFI11_RS04595 PF00501 AMP-binding enzyme CFI11_RS04595 PF13193 AMP-binding enzyme C-terminal domain CFI11_RS04600 PF00866 Ring hydroxylating beta subunit CFI11_RS04605 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CFI11_RS04605 PF00355 Rieske [2Fe-2S] domain CFI11_RS04610 PF00111 2Fe-2S iron-sulfur cluster binding domain CFI11_RS04610 PF00970 Oxidoreductase FAD-binding domain CFI11_RS04620 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CFI11_RS04630 PF03480 Bacterial extracellular solute-binding protein, family 7 CFI11_RS04650 PF00005 ABC transporter CFI11_RS04650 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CFI11_RS04655 PF00005 ABC transporter CFI11_RS04655 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CFI11_RS04660 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS04660 PF12911 N-terminal TM domain of oligopeptide transport permease C CFI11_RS04665 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS04670 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CFI11_RS04680 PF04199 Putative cyclase CFI11_RS04685 PF01593 Flavin containing amine oxidoreductase CFI11_RS04695 PF02626 Carboxyltransferase domain, subdomain A and B CFI11_RS04705 PF02785 Biotin carboxylase C-terminal domain CFI11_RS04705 PF00289 Biotin carboxylase, N-terminal domain CFI11_RS04705 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CFI11_RS04715 PF03746 LamB/YcsF family CFI11_RS04720 PF02653 Branched-chain amino acid transport system / permease component CFI11_RS04725 PF00005 ABC transporter CFI11_RS04730 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CFI11_RS04735 PF03466 LysR substrate binding domain CFI11_RS04735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFI11_RS04740 PF03358 NADPH-dependent FMN reductase CFI11_RS04745 PF00892 EamA-like transporter family CFI11_RS04755 PF01168 Alanine racemase, N-terminal domain CFI11_RS04755 PF14031 Putative serine dehydratase domain CFI11_RS04760 PF00266 Aminotransferase class-V CFI11_RS04770 PF03466 LysR substrate binding domain CFI11_RS04770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFI11_RS04775 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CFI11_RS04780 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS04785 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS04785 PF12911 N-terminal TM domain of oligopeptide transport permease C CFI11_RS04790 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CFI11_RS04790 PF00005 ABC transporter CFI11_RS04795 PF04264 YceI-like domain CFI11_RS04815 PF00534 Glycosyl transferases group 1 CFI11_RS04815 PF13439 Glycosyltransferase Family 4 CFI11_RS04820 PF00459 Inositol monophosphatase family CFI11_RS04845 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CFI11_RS04845 PF01872 RibD C-terminal domain CFI11_RS04855 PF00485 Phosphoribulokinase / Uridine kinase family CFI11_RS04860 PF00376 MerR family regulatory protein CFI11_RS04860 PF09278 MerR, DNA binding CFI11_RS04865 PF00403 Heavy-metal-associated domain CFI11_RS04890 PF08448 PAS fold CFI11_RS04890 PF01339 CheB methylesterase CFI11_RS04890 PF01739 CheR methyltransferase, SAM binding domain CFI11_RS04890 PF03705 CheR methyltransferase, all-alpha domain CFI11_RS04900 PF00356 Bacterial regulatory proteins, lacI family CFI11_RS04910 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CFI11_RS04910 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CFI11_RS04920 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS04925 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS04935 PF03459 TOBE domain CFI11_RS04935 PF00005 ABC transporter CFI11_RS04935 PF17912 MalK OB fold domain CFI11_RS04940 PF00005 ABC transporter CFI11_RS04940 PF08402 TOBE domain CFI11_RS04945 PF02734 DAK2 domain CFI11_RS04945 PF02733 Dak1 domain CFI11_RS04950 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CFI11_RS04950 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CFI11_RS04955 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CFI11_RS04955 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CFI11_RS04965 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CFI11_RS04985 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS04990 PF12911 N-terminal TM domain of oligopeptide transport permease C CFI11_RS04990 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS05000 PF00005 ABC transporter CFI11_RS05000 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CFI11_RS05005 PF00005 ABC transporter CFI11_RS05005 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CFI11_RS05010 PF00884 Sulfatase CFI11_RS05010 PF16347 Domain of unknown function (DUF4976) CFI11_RS05015 PF09339 IclR helix-turn-helix domain CFI11_RS05015 PF01614 Bacterial transcriptional regulator CFI11_RS05020 PF00266 Aminotransferase class-V CFI11_RS05025 PF00291 Pyridoxal-phosphate dependent enzyme CFI11_RS05030 PF01168 Alanine racemase, N-terminal domain CFI11_RS05030 PF14031 Putative serine dehydratase domain CFI11_RS05035 PF02423 Ornithine cyclodeaminase/mu-crystallin family CFI11_RS05040 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CFI11_RS05040 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CFI11_RS05055 PF00128 Alpha amylase, catalytic domain CFI11_RS05060 PF02492 CobW/HypB/UreG, nucleotide-binding domain CFI11_RS05065 PF01730 UreF CFI11_RS05070 PF05194 UreE urease accessory protein, C-terminal domain CFI11_RS05070 PF02814 UreE urease accessory protein, N-terminal domain CFI11_RS05085 PF00449 Urease alpha-subunit, N-terminal domain CFI11_RS05085 PF01979 Amidohydrolase family CFI11_RS05100 PF02627 Carboxymuconolactone decarboxylase family CFI11_RS05105 PF04199 Putative cyclase CFI11_RS05110 PF00699 Urease beta subunit CFI11_RS05115 PF00547 Urease, gamma subunit CFI11_RS05120 PF01774 UreD urease accessory protein CFI11_RS05125 PF00958 GMP synthase C terminal domain CFI11_RS05125 PF00117 Glutamine amidotransferase class-I CFI11_RS05125 PF02540 NAD synthase CFI11_RS05130 PF00067 Cytochrome P450 CFI11_RS05135 PF00120 Glutamine synthetase, catalytic domain CFI11_RS05135 PF03951 Glutamine synthetase, beta-Grasp domain CFI11_RS05140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFI11_RS05140 PF00512 His Kinase A (phospho-acceptor) domain CFI11_RS05150 PF00196 Bacterial regulatory proteins, luxR family CFI11_RS05150 PF00072 Response regulator receiver domain CFI11_RS05155 PF01011 PQQ enzyme repeat CFI11_RS05155 PF13360 PQQ-like domain CFI11_RS05175 PF00005 ABC transporter CFI11_RS05195 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CFI11_RS05210 PF00111 2Fe-2S iron-sulfur cluster binding domain CFI11_RS05210 PF01799 [2Fe-2S] binding domain CFI11_RS05215 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CFI11_RS05215 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CFI11_RS05220 PF00941 FAD binding domain in molybdopterin dehydrogenase CFI11_RS05220 PF03450 CO dehydrogenase flavoprotein C-terminal domain CFI11_RS05230 PF12801 4Fe-4S binding domain CFI11_RS05230 PF04205 FMN-binding domain CFI11_RS05235 PF08042 PqqA family CFI11_RS05240 PF12706 Beta-lactamase superfamily domain CFI11_RS05245 PF03070 TENA/THI-4/PQQC family CFI11_RS05250 PF05402 Coenzyme PQQ synthesis protein D (PqqD) CFI11_RS05255 PF04055 Radical SAM superfamily CFI11_RS05255 PF13186 Iron-sulfur cluster-binding domain CFI11_RS05260 PF00202 Aminotransferase class-III CFI11_RS05265 PF01614 Bacterial transcriptional regulator CFI11_RS05265 PF09339 IclR helix-turn-helix domain CFI11_RS05270 PF03401 Tripartite tricarboxylate transporter family receptor CFI11_RS05280 PF01970 Tripartite tricarboxylate transporter TctA family CFI11_RS05295 PF01557 Fumarylacetoacetate (FAA) hydrolase family CFI11_RS05305 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CFI11_RS05325 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CFI11_RS05325 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CFI11_RS05325 PF00378 Enoyl-CoA hydratase/isomerase CFI11_RS05330 PF02770 Acyl-CoA dehydrogenase, middle domain CFI11_RS05330 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CFI11_RS05330 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CFI11_RS05335 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CFI11_RS05335 PF02770 Acyl-CoA dehydrogenase, middle domain CFI11_RS05335 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CFI11_RS05345 PF00378 Enoyl-CoA hydratase/isomerase CFI11_RS05350 PF00501 AMP-binding enzyme CFI11_RS05350 PF13193 AMP-binding enzyme C-terminal domain CFI11_RS05355 PF00834 Ribulose-phosphate 3 epimerase family CFI11_RS05360 PF00005 ABC transporter CFI11_RS05370 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS05375 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS05380 PF14602 Hexapeptide repeat of succinyl-transferase CFI11_RS05380 PF12804 MobA-like NTP transferase domain CFI11_RS05380 PF00132 Bacterial transferase hexapeptide (six repeats) CFI11_RS05385 PF00392 Bacterial regulatory proteins, gntR family CFI11_RS05385 PF07702 UTRA domain CFI11_RS05390 PF06754 Phosphonate metabolism protein PhnG CFI11_RS05395 PF05845 Bacterial phosphonate metabolism protein (PhnH) CFI11_RS05400 PF05861 Bacterial phosphonate metabolism protein (PhnI) CFI11_RS05405 PF06007 Phosphonate metabolism protein PhnJ CFI11_RS05410 PF12697 Alpha/beta hydrolase family CFI11_RS05410 PF08241 Methyltransferase domain CFI11_RS05415 PF00005 ABC transporter CFI11_RS05420 PF00005 ABC transporter CFI11_RS05435 PF07969 Amidohydrolase family CFI11_RS05445 PF08446 PAS fold CFI11_RS05445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFI11_RS05445 PF00360 Phytochrome region CFI11_RS05445 PF01590 GAF domain CFI11_RS05445 PF00512 His Kinase A (phospho-acceptor) domain CFI11_RS05470 PF00300 Histidine phosphatase superfamily (branch 1) CFI11_RS05475 PF13439 Glycosyltransferase Family 4 CFI11_RS05475 PF00534 Glycosyl transferases group 1 CFI11_RS05480 PF00534 Glycosyl transferases group 1 CFI11_RS05490 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CFI11_RS05490 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CFI11_RS05490 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CFI11_RS05495 PF00924 Mechanosensitive ion channel CFI11_RS05505 PF12911 N-terminal TM domain of oligopeptide transport permease C CFI11_RS05505 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS05510 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS05520 PF00005 ABC transporter CFI11_RS05520 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CFI11_RS05535 PF00005 ABC transporter CFI11_RS05540 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS05545 PF07969 Amidohydrolase family CFI11_RS05555 PF02525 Flavodoxin-like fold CFI11_RS05560 PF02525 Flavodoxin-like fold CFI11_RS05575 PF01515 Phosphate acetyl/butaryl transferase CFI11_RS05580 PF00871 Acetokinase family CFI11_RS05590 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) CFI11_RS05595 PF00361 Proton-conducting membrane transporter CFI11_RS05595 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CFI11_RS05595 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus CFI11_RS05600 PF03466 LysR substrate binding domain CFI11_RS05600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFI11_RS05610 PF01037 Lrp/AsnC ligand binding domain CFI11_RS05615 PF05922 Peptidase inhibitor I9 CFI11_RS05615 PF00082 Subtilase family CFI11_RS05620 PF08453 Peptidase family M9 N-terminal CFI11_RS05620 PF01752 Collagenase CFI11_RS05620 PF18496 Collagenase G catalytic helper subdomain CFI11_RS05625 PF00672 HAMP domain CFI11_RS05625 PF00211 Adenylate and Guanylate cyclase catalytic domain CFI11_RS05635 PF00005 ABC transporter CFI11_RS05635 PF00664 ABC transporter transmembrane region CFI11_RS05640 PF00072 Response regulator receiver domain CFI11_RS05640 PF00486 Transcriptional regulatory protein, C terminal CFI11_RS05645 PF00512 His Kinase A (phospho-acceptor) domain CFI11_RS05645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFI11_RS05645 PF00672 HAMP domain CFI11_RS05650 PF00664 ABC transporter transmembrane region CFI11_RS05650 PF04954 Siderophore-interacting protein CFI11_RS05650 PF00005 ABC transporter CFI11_RS05650 PF08021 Siderophore-interacting FAD-binding domain CFI11_RS05665 PF01425 Amidase CFI11_RS05670 PF13378 Enolase C-terminal domain-like CFI11_RS05670 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CFI11_RS05675 PF08240 Alcohol dehydrogenase GroES-like domain CFI11_RS05675 PF00107 Zinc-binding dehydrogenase CFI11_RS05680 PF07690 Major Facilitator Superfamily CFI11_RS05685 PF00206 Lyase CFI11_RS05685 PF10397 Adenylosuccinate lyase C-terminus CFI11_RS05690 PF00775 Dioxygenase CFI11_RS05695 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal CFI11_RS05695 PF00775 Dioxygenase CFI11_RS05700 PF02627 Carboxymuconolactone decarboxylase family CFI11_RS05705 PF12146 Serine aminopeptidase, S33 CFI11_RS05715 PF00291 Pyridoxal-phosphate dependent enzyme CFI11_RS05720 PF00561 alpha/beta hydrolase fold CFI11_RS05720 PF00364 Biotin-requiring enzyme CFI11_RS05735 PF02801 Beta-ketoacyl synthase, C-terminal domain CFI11_RS05735 PF00109 Beta-ketoacyl synthase, N-terminal domain CFI11_RS05740 PF07977 FabA-like domain CFI11_RS05765 PF00919 Uncharacterized protein family UPF0004 CFI11_RS05765 PF04055 Radical SAM superfamily CFI11_RS05765 PF01938 TRAM domain CFI11_RS05770 PF00691 OmpA family CFI11_RS05780 PF02562 PhoH-like protein CFI11_RS05785 PF02130 Uncharacterized protein family UPF0054 CFI11_RS05790 PF00571 CBS domain CFI11_RS05790 PF03471 Transporter associated domain CFI11_RS05795 PF00795 Carbon-nitrogen hydrolase CFI11_RS05800 PF02772 S-adenosylmethionine synthetase, central domain CFI11_RS05800 PF00438 S-adenosylmethionine synthetase, N-terminal domain CFI11_RS05800 PF02773 S-adenosylmethionine synthetase, C-terminal domain CFI11_RS05815 PF02390 Putative methyltransferase CFI11_RS05825 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CFI11_RS05830 PF02224 Cytidylate kinase CFI11_RS05840 PF00575 S1 RNA binding domain CFI11_RS05845 PF00216 Bacterial DNA-binding protein CFI11_RS05855 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CFI11_RS05865 PF00291 Pyridoxal-phosphate dependent enzyme CFI11_RS05895 PF01195 Peptidyl-tRNA hydrolase CFI11_RS05900 PF03992 Antibiotic biosynthesis monooxygenase CFI11_RS05905 PF01386 Ribosomal L25p family CFI11_RS05905 PF14693 Ribosomal protein TL5, C-terminal domain CFI11_RS05920 PF01070 FMN-dependent dehydrogenase CFI11_RS05935 PF01575 MaoC like domain CFI11_RS05940 PF00290 Tryptophan synthase alpha chain CFI11_RS05945 PF06071 Protein of unknown function (DUF933) CFI11_RS05945 PF01926 50S ribosome-binding GTPase CFI11_RS05955 PF00005 ABC transporter CFI11_RS05955 PF12704 MacB-like periplasmic core domain CFI11_RS05955 PF02687 FtsX-like permease family CFI11_RS05965 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CFI11_RS05965 PF00529 HlyD membrane-fusion protein of T1SS CFI11_RS06065 PF02798 Glutathione S-transferase, N-terminal domain CFI11_RS06065 PF00043 Glutathione S-transferase, C-terminal domain CFI11_RS06090 PF03466 LysR substrate binding domain CFI11_RS06090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFI11_RS06115 PF02899 Phage integrase, N-terminal SAM-like domain CFI11_RS06115 PF00589 Phage integrase family CFI11_RS06145 PF13378 Enolase C-terminal domain-like CFI11_RS06145 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CFI11_RS06150 PF08450 SMP-30/Gluconolactonase/LRE-like region CFI11_RS06155 PF03450 CO dehydrogenase flavoprotein C-terminal domain CFI11_RS06155 PF00941 FAD binding domain in molybdopterin dehydrogenase CFI11_RS06160 PF01799 [2Fe-2S] binding domain CFI11_RS06160 PF00111 2Fe-2S iron-sulfur cluster binding domain CFI11_RS06165 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CFI11_RS06165 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CFI11_RS06170 PF00440 Bacterial regulatory proteins, tetR family CFI11_RS06170 PF18665 Tetracyclin repressor-like, C-terminal domain CFI11_RS06175 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CFI11_RS06175 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CFI11_RS06180 PF02779 Transketolase, pyrimidine binding domain CFI11_RS06180 PF02780 Transketolase, C-terminal domain CFI11_RS06200 PF03466 LysR substrate binding domain CFI11_RS06200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFI11_RS06220 PF00106 short chain dehydrogenase CFI11_RS06230 PF02899 Phage integrase, N-terminal SAM-like domain CFI11_RS06230 PF00589 Phage integrase family CFI11_RS06235 PF01425 Amidase CFI11_RS06240 PF02727 Copper amine oxidase, N2 domain CFI11_RS06240 PF01179 Copper amine oxidase, enzyme domain CFI11_RS06240 PF02728 Copper amine oxidase, N3 domain CFI11_RS06250 PF00005 ABC transporter CFI11_RS06250 PF12399 Branched-chain amino acid ATP-binding cassette transporter CFI11_RS06255 PF00005 ABC transporter CFI11_RS06260 PF02653 Branched-chain amino acid transport system / permease component CFI11_RS06295 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CFI11_RS06295 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CFI11_RS06295 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CFI11_RS06305 PF00072 Response regulator receiver domain CFI11_RS06305 PF00196 Bacterial regulatory proteins, luxR family CFI11_RS06315 PF01627 Hpt domain CFI11_RS06315 PF00989 PAS fold CFI11_RS06315 PF00072 Response regulator receiver domain CFI11_RS06315 PF18415 Histidine kinase receptor ArcB trans-membrane domain CFI11_RS06315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFI11_RS06315 PF00512 His Kinase A (phospho-acceptor) domain CFI11_RS06320 PF01593 Flavin containing amine oxidoreductase CFI11_RS06330 PF08533 Beta-galactosidase C-terminal domain CFI11_RS06330 PF08532 Beta-galactosidase trimerisation domain CFI11_RS06330 PF02449 Beta-galactosidase CFI11_RS06335 PF08450 SMP-30/Gluconolactonase/LRE-like region CFI11_RS06340 PF01081 KDPG and KHG aldolase CFI11_RS06345 PF05035 2-keto-3-deoxy-galactonokinase CFI11_RS06355 PF11975 Family 4 glycosyl hydrolase C-terminal domain CFI11_RS06355 PF02056 Family 4 glycosyl hydrolase CFI11_RS06360 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS06365 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS06375 PF01614 Bacterial transcriptional regulator CFI11_RS06375 PF09339 IclR helix-turn-helix domain CFI11_RS06380 PF00005 ABC transporter CFI11_RS06380 PF17912 MalK OB fold domain CFI11_RS06385 PF00005 ABC transporter CFI11_RS06390 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS06395 PF13416 Bacterial extracellular solute-binding protein CFI11_RS06405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFI11_RS06405 PF00672 HAMP domain CFI11_RS06405 PF00512 His Kinase A (phospho-acceptor) domain CFI11_RS06410 PF00072 Response regulator receiver domain CFI11_RS06410 PF00486 Transcriptional regulatory protein, C terminal CFI11_RS06415 PF01547 Bacterial extracellular solute-binding protein CFI11_RS06420 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS06425 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS06430 PF17912 MalK OB fold domain CFI11_RS06430 PF00005 ABC transporter CFI11_RS06450 PF00106 short chain dehydrogenase CFI11_RS06460 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CFI11_RS06460 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CFI11_RS06460 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CFI11_RS06475 PF00483 Nucleotidyl transferase CFI11_RS06475 PF01050 Mannose-6-phosphate isomerase CFI11_RS06490 PF16822 SGNH hydrolase-like domain, acetyltransferase AlgX CFI11_RS06490 PF16824 C-terminal carbohydrate-binding module CFI11_RS06510 PF01479 S4 domain CFI11_RS06510 PF00163 Ribosomal protein S4/S9 N-terminal domain CFI11_RS06515 PF00155 Aminotransferase class I and II CFI11_RS06520 PF02153 Prephenate dehydrogenase CFI11_RS06535 PF04752 ChaC-like protein CFI11_RS06545 PF00691 OmpA family CFI11_RS06545 PF01389 OmpA-like transmembrane domain CFI11_RS06555 PF00004 ATPase family associated with various cellular activities (AAA) CFI11_RS06555 PF02861 Clp amino terminal domain, pathogenicity island component CFI11_RS06555 PF07724 AAA domain (Cdc48 subfamily) CFI11_RS06555 PF17871 AAA lid domain CFI11_RS06555 PF10431 C-terminal, D2-small domain, of ClpB protein CFI11_RS06560 PF16123 Hydroxyacylglutathione hydrolase C-terminus CFI11_RS06560 PF00753 Metallo-beta-lactamase superfamily CFI11_RS06565 PF08241 Methyltransferase domain CFI11_RS06570 PF00213 ATP synthase delta (OSCP) subunit CFI11_RS06575 PF02874 ATP synthase alpha/beta family, beta-barrel domain CFI11_RS06575 PF00306 ATP synthase alpha/beta chain, C terminal domain CFI11_RS06575 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CFI11_RS06580 PF00231 ATP synthase CFI11_RS06585 PF02874 ATP synthase alpha/beta family, beta-barrel domain CFI11_RS06585 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CFI11_RS06590 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CFI11_RS06595 PF09458 H-type lectin domain CFI11_RS06605 PF14572 Phosphoribosyl synthetase-associated domain CFI11_RS06605 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CFI11_RS06620 PF01212 Beta-eliminating lyase CFI11_RS06625 PF03692 Putative zinc- or iron-chelating domain CFI11_RS06630 PF06574 FAD synthetase CFI11_RS06630 PF01687 Riboflavin kinase CFI11_RS06635 PF01575 MaoC like domain CFI11_RS06645 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS06650 PF00005 ABC transporter CFI11_RS06650 PF00571 CBS domain CFI11_RS06660 PF08669 Glycine cleavage T-protein C-terminal barrel domain CFI11_RS06660 PF01571 Aminomethyltransferase folate-binding domain CFI11_RS06665 PF00356 Bacterial regulatory proteins, lacI family CFI11_RS06670 PF02833 DHHA2 domain CFI11_RS06670 PF01368 DHH family CFI11_RS06680 PF13673 Acetyltransferase (GNAT) domain CFI11_RS06695 PF00166 Chaperonin 10 Kd subunit CFI11_RS06700 PF00118 TCP-1/cpn60 chaperonin family CFI11_RS06710 PF00892 EamA-like transporter family CFI11_RS06720 PF07969 Amidohydrolase family CFI11_RS06725 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CFI11_RS06725 PF02222 ATP-grasp domain CFI11_RS06730 PF00731 AIR carboxylase CFI11_RS06740 PF00011 Hsp20/alpha crystallin family CFI11_RS06760 PF14306 PUA-like domain CFI11_RS06760 PF01747 ATP-sulfurylase CFI11_RS06765 PF07992 Pyridine nucleotide-disulphide oxidoreductase CFI11_RS06770 PF01037 Lrp/AsnC ligand binding domain CFI11_RS06780 PF02578 Multi-copper polyphenol oxidoreductase laccase CFI11_RS06790 PF01790 Prolipoprotein diacylglyceryl transferase CFI11_RS06805 PF03807 NADP oxidoreductase coenzyme F420-dependent CFI11_RS06805 PF14748 Pyrroline-5-carboxylate reductase dimerisation CFI11_RS06810 PF01588 Putative tRNA binding domain CFI11_RS06815 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CFI11_RS06815 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CFI11_RS06820 PF00265 Thymidine kinase CFI11_RS06825 PF03358 NADPH-dependent FMN reductase CFI11_RS06830 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CFI11_RS06830 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CFI11_RS06850 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CFI11_RS06850 PF02142 MGS-like domain CFI11_RS06850 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CFI11_RS06855 PF02310 B12 binding domain CFI11_RS06855 PF04055 Radical SAM superfamily CFI11_RS06860 PF02830 V4R domain CFI11_RS06870 PF01336 OB-fold nucleic acid binding domain CFI11_RS06870 PF00152 tRNA synthetases class II (D, K and N) CFI11_RS06870 PF02938 GAD domain CFI11_RS06890 PF00486 Transcriptional regulatory protein, C terminal CFI11_RS06890 PF00072 Response regulator receiver domain CFI11_RS06905 PF13417 Glutathione S-transferase, N-terminal domain CFI11_RS06905 PF00043 Glutathione S-transferase, C-terminal domain CFI11_RS06915 PF00881 Nitroreductase family CFI11_RS06920 PF00850 Histone deacetylase domain CFI11_RS06950 PF02668 Taurine catabolism dioxygenase TauD, TfdA family CFI11_RS06960 PF18693 TRAM domain CFI11_RS06960 PF00919 Uncharacterized protein family UPF0004 CFI11_RS06960 PF04055 Radical SAM superfamily CFI11_RS06970 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CFI11_RS06970 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CFI11_RS06970 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CFI11_RS06970 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CFI11_RS06975 PF00793 DAHP synthetase I family CFI11_RS06985 PF00005 ABC transporter CFI11_RS06990 PF06965 Na+/H+ antiporter 1 CFI11_RS07020 PF01061 ABC-2 type transporter CFI11_RS07040 PF00893 Small Multidrug Resistance protein CFI11_RS07050 PF00873 AcrB/AcrD/AcrF family CFI11_RS07060 PF02569 Pantoate-beta-alanine ligase CFI11_RS07065 PF02548 Ketopantoate hydroxymethyltransferase CFI11_RS07070 PF01042 Endoribonuclease L-PSP CFI11_RS07075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFI11_RS07075 PF03466 LysR substrate binding domain CFI11_RS07080 PF00582 Universal stress protein family CFI11_RS07090 PF13244 Domain of unknown function (DUF4040) CFI11_RS07090 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CFI11_RS07090 PF00361 Proton-conducting membrane transporter CFI11_RS07095 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter CFI11_RS07100 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CFI11_RS07105 PF00361 Proton-conducting membrane transporter CFI11_RS07110 PF01899 Na+/H+ ion antiporter subunit CFI11_RS07115 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) CFI11_RS07120 PF03334 Na+/H+ antiporter subunit CFI11_RS07140 PF02798 Glutathione S-transferase, N-terminal domain CFI11_RS07145 PF00202 Aminotransferase class-III CFI11_RS07150 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CFI11_RS07150 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CFI11_RS07160 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CFI11_RS07160 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CFI11_RS07170 PF00271 Helicase conserved C-terminal domain CFI11_RS07170 PF04408 Helicase associated domain (HA2) CFI11_RS07170 PF00270 DEAD/DEAH box helicase CFI11_RS07170 PF08482 ATP-dependent helicase C-terminal CFI11_RS07180 PF00873 AcrB/AcrD/AcrF family CFI11_RS07210 PF01638 HxlR-like helix-turn-helix CFI11_RS07225 PF00830 Ribosomal L28 family CFI11_RS07235 PF02146 Sir2 family CFI11_RS07240 PF01451 Low molecular weight phosphotyrosine protein phosphatase CFI11_RS07245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFI11_RS07245 PF03466 LysR substrate binding domain CFI11_RS07250 PF00815 Histidinol dehydrogenase CFI11_RS07255 PF00291 Pyridoxal-phosphate dependent enzyme CFI11_RS07275 PF00679 Elongation factor G C-terminus CFI11_RS07275 PF00009 Elongation factor Tu GTP binding domain CFI11_RS07275 PF06421 GTP-binding protein LepA C-terminus CFI11_RS07275 PF03144 Elongation factor Tu domain 2 CFI11_RS07280 PF13274 Protein of unknown function (DUF4065) CFI11_RS07310 PF00561 alpha/beta hydrolase fold CFI11_RS07320 PF05675 Protein of unknown function (DUF817) CFI11_RS07325 PF00464 Serine hydroxymethyltransferase CFI11_RS07330 PF01513 ATP-NAD kinase CFI11_RS07335 PF13193 AMP-binding enzyme C-terminal domain CFI11_RS07335 PF00501 AMP-binding enzyme CFI11_RS07340 PF01425 Amidase CFI11_RS07345 PF16177 Acetyl-coenzyme A synthetase N-terminus CFI11_RS07345 PF13193 AMP-binding enzyme C-terminal domain CFI11_RS07345 PF00501 AMP-binding enzyme CFI11_RS07350 PF00390 Malic enzyme, N-terminal domain CFI11_RS07350 PF01515 Phosphate acetyl/butaryl transferase CFI11_RS07350 PF03949 Malic enzyme, NAD binding domain CFI11_RS07360 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CFI11_RS07365 PF00591 Glycosyl transferase family, a/b domain CFI11_RS07365 PF02885 Glycosyl transferase family, helical bundle domain CFI11_RS07365 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain CFI11_RS07370 PF01676 Metalloenzyme superfamily CFI11_RS07390 PF00501 AMP-binding enzyme CFI11_RS07390 PF13193 AMP-binding enzyme C-terminal domain CFI11_RS07410 PF00378 Enoyl-CoA hydratase/isomerase CFI11_RS07410 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CFI11_RS07410 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CFI11_RS07420 PF00108 Thiolase, N-terminal domain CFI11_RS07420 PF02803 Thiolase, C-terminal domain CFI11_RS07430 PF13409 Glutathione S-transferase, N-terminal domain CFI11_RS07435 PF02770 Acyl-CoA dehydrogenase, middle domain CFI11_RS07435 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CFI11_RS07435 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CFI11_RS07445 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CFI11_RS07445 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CFI11_RS07445 PF12806 Acetyl-CoA dehydrogenase C-terminal like CFI11_RS07445 PF02770 Acyl-CoA dehydrogenase, middle domain CFI11_RS07450 PF13411 MerR HTH family regulatory protein CFI11_RS07455 PF00376 MerR family regulatory protein CFI11_RS07455 PF09278 MerR, DNA binding CFI11_RS07470 PF01554 MatE CFI11_RS07475 PF01180 Dihydroorotate dehydrogenase CFI11_RS07490 PF02872 5'-nucleotidase, C-terminal domain CFI11_RS07490 PF00149 Calcineurin-like phosphoesterase CFI11_RS07495 PF02586 SOS response associated peptidase (SRAP) CFI11_RS07500 PF12802 MarR family CFI11_RS07505 PF03746 LamB/YcsF family CFI11_RS07510 PF02626 Carboxyltransferase domain, subdomain A and B CFI11_RS07525 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CFI11_RS07535 PF03480 Bacterial extracellular solute-binding protein, family 7 CFI11_RS07540 PF01266 FAD dependent oxidoreductase CFI11_RS07560 PF08402 TOBE domain CFI11_RS07560 PF00005 ABC transporter CFI11_RS07575 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CFI11_RS07575 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CFI11_RS07585 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS07590 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS07595 PF00005 ABC transporter CFI11_RS07595 PF17912 MalK OB fold domain CFI11_RS07600 PF17912 MalK OB fold domain CFI11_RS07600 PF00005 ABC transporter CFI11_RS07610 PF00455 DeoR C terminal sensor domain CFI11_RS07610 PF08220 DeoR-like helix-turn-helix domain CFI11_RS07615 PF16901 C-terminal domain of alpha-glycerophosphate oxidase CFI11_RS07615 PF01266 FAD dependent oxidoreductase CFI11_RS07620 PF00501 AMP-binding enzyme CFI11_RS07620 PF13193 AMP-binding enzyme C-terminal domain CFI11_RS07625 PF01494 FAD binding domain CFI11_RS07640 PF00005 ABC transporter CFI11_RS07640 PF00664 ABC transporter transmembrane region CFI11_RS07645 PF00144 Beta-lactamase CFI11_RS07650 PF13193 AMP-binding enzyme C-terminal domain CFI11_RS07650 PF00501 AMP-binding enzyme CFI11_RS07655 PF07859 alpha/beta hydrolase fold CFI11_RS07660 PF00005 ABC transporter CFI11_RS07660 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CFI11_RS07665 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS07665 PF12911 N-terminal TM domain of oligopeptide transport permease C CFI11_RS07670 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS07675 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CFI11_RS07680 PF02595 Glycerate kinase family CFI11_RS07685 PF00939 Sodium:sulfate symporter transmembrane region CFI11_RS07695 PF13660 Domain of unknown function (DUF4147) CFI11_RS07695 PF05161 MOFRL family CFI11_RS07700 PF02580 D-Tyr-tRNA(Tyr) deacylase CFI11_RS07710 PF00011 Hsp20/alpha crystallin family CFI11_RS07735 PF05816 Toxic anion resistance protein (TelA) CFI11_RS07745 PF01479 S4 domain CFI11_RS07745 PF00849 RNA pseudouridylate synthase CFI11_RS07750 PF14437 MafB19-like deaminase CFI11_RS07760 PF00890 FAD binding domain CFI11_RS07765 PF01758 Sodium Bile acid symporter family CFI11_RS07770 PF02080 TrkA-C domain CFI11_RS07770 PF03600 Citrate transporter CFI11_RS07775 PF01709 Transcriptional regulator CFI11_RS07795 PF00005 ABC transporter CFI11_RS07795 PF00664 ABC transporter transmembrane region CFI11_RS07800 PF00266 Aminotransferase class-V CFI11_RS07810 PF00155 Aminotransferase class I and II CFI11_RS07820 PF00378 Enoyl-CoA hydratase/isomerase CFI11_RS07825 PF08264 Anticodon-binding domain of tRNA CFI11_RS07825 PF00133 tRNA synthetases class I (I, L, M and V) CFI11_RS07825 PF10458 Valyl tRNA synthetase tRNA binding arm CFI11_RS07830 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CFI11_RS07830 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CFI11_RS07845 PF02219 Methylenetetrahydrofolate reductase CFI11_RS07850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFI11_RS07850 PF03466 LysR substrate binding domain CFI11_RS07860 PF16884 N-terminal domain of oxidoreductase CFI11_RS07860 PF00107 Zinc-binding dehydrogenase CFI11_RS07865 PF16884 N-terminal domain of oxidoreductase CFI11_RS07865 PF00107 Zinc-binding dehydrogenase CFI11_RS07875 PF00459 Inositol monophosphatase family CFI11_RS07890 PF14850 DNA-binding domain of Proline dehydrogenase CFI11_RS07890 PF00171 Aldehyde dehydrogenase family CFI11_RS07890 PF18327 Proline utilization A proline dehydrogenase N-terminal domain CFI11_RS07890 PF01619 Proline dehydrogenase CFI11_RS07895 PF01037 Lrp/AsnC ligand binding domain CFI11_RS07910 PF09334 tRNA synthetases class I (M) CFI11_RS07920 PF04264 YceI-like domain CFI11_RS07925 PF00248 Aldo/keto reductase family CFI11_RS07930 PF01965 DJ-1/PfpI family CFI11_RS07930 PF12833 Helix-turn-helix domain CFI11_RS07935 PF05853 beta-keto acid cleavage enzyme CFI11_RS07940 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CFI11_RS07940 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CFI11_RS07990 PF00990 Diguanylate cyclase, GGDEF domain CFI11_RS07990 PF00072 Response regulator receiver domain CFI11_RS08020 PF00563 EAL domain CFI11_RS08020 PF00990 Diguanylate cyclase, GGDEF domain CFI11_RS08020 PF03707 Bacterial signalling protein N terminal repeat CFI11_RS08025 PF00005 ABC transporter CFI11_RS08050 PF02329 Histidine carboxylase PI chain CFI11_RS08080 PF13439 Glycosyltransferase Family 4 CFI11_RS08080 PF00534 Glycosyl transferases group 1 CFI11_RS08155 PF00158 Sigma-54 interaction domain CFI11_RS08155 PF06956 Regulator of RNA terminal phosphate cyclase CFI11_RS08165 PF02272 DHHA1 domain CFI11_RS08165 PF17768 RecJ OB domain CFI11_RS08165 PF01368 DHH family CFI11_RS08170 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded CFI11_RS08175 PF03447 Homoserine dehydrogenase, NAD binding domain CFI11_RS08175 PF00742 Homoserine dehydrogenase CFI11_RS08175 PF01842 ACT domain CFI11_RS08195 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CFI11_RS08195 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CFI11_RS08220 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CFI11_RS08220 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CFI11_RS08230 PF01266 FAD dependent oxidoreductase CFI11_RS08235 PF04267 Sarcosine oxidase, delta subunit family CFI11_RS08240 PF07992 Pyridine nucleotide-disulphide oxidoreductase CFI11_RS08240 PF08669 Glycine cleavage T-protein C-terminal barrel domain CFI11_RS08240 PF01571 Aminomethyltransferase folate-binding domain CFI11_RS08240 PF17806 Sarcosine oxidase A3 domain CFI11_RS08255 PF10410 DnaB-helicase binding domain of primase CFI11_RS08255 PF08275 DNA primase catalytic core, N-terminal domain CFI11_RS08255 PF08278 DNA primase DnaG DnaB-binding CFI11_RS08255 PF13662 Toprim domain CFI11_RS08255 PF01807 CHC2 zinc finger CFI11_RS08260 PF04545 Sigma-70, region 4 CFI11_RS08260 PF04539 Sigma-70 region 3 CFI11_RS08260 PF04546 Sigma-70, non-essential region CFI11_RS08260 PF03979 Sigma-70 factor, region 1.1 CFI11_RS08260 PF00140 Sigma-70 factor, region 1.2 CFI11_RS08260 PF04542 Sigma-70 region 2 CFI11_RS08275 PF01894 Uncharacterised protein family UPF0047 CFI11_RS08280 PF03477 ATP cone domain CFI11_RS08285 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CFI11_RS08285 PF01872 RibD C-terminal domain CFI11_RS08290 PF05159 Capsule polysaccharide biosynthesis protein CFI11_RS08300 PF05159 Capsule polysaccharide biosynthesis protein CFI11_RS08305 PF00677 Lumazine binding domain CFI11_RS08315 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CFI11_RS08315 PF00925 GTP cyclohydrolase II CFI11_RS08320 PF00885 6,7-dimethyl-8-ribityllumazine synthase CFI11_RS08325 PF01029 NusB family CFI11_RS08345 PF02785 Biotin carboxylase C-terminal domain CFI11_RS08345 PF00682 HMGL-like CFI11_RS08345 PF02436 Conserved carboxylase domain CFI11_RS08345 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CFI11_RS08345 PF00364 Biotin-requiring enzyme CFI11_RS08345 PF00289 Biotin carboxylase, N-terminal domain CFI11_RS08350 PF01070 FMN-dependent dehydrogenase CFI11_RS08355 PF13361 UvrD-like helicase C-terminal domain CFI11_RS08355 PF00580 UvrD/REP helicase N-terminal domain CFI11_RS08370 PF02381 MraZ protein, putative antitoxin-like CFI11_RS08375 PF01795 MraW methylase family CFI11_RS08385 PF03717 Penicillin-binding Protein dimerisation domain CFI11_RS08385 PF00905 Penicillin binding protein transpeptidase domain CFI11_RS08390 PF08245 Mur ligase middle domain CFI11_RS08390 PF02875 Mur ligase family, glutamate ligase domain CFI11_RS08390 PF01225 Mur ligase family, catalytic domain CFI11_RS08395 PF01225 Mur ligase family, catalytic domain CFI11_RS08395 PF02875 Mur ligase family, glutamate ligase domain CFI11_RS08395 PF08245 Mur ligase middle domain CFI11_RS08400 PF00953 Glycosyl transferase family 4 CFI11_RS08400 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CFI11_RS08415 PF02875 Mur ligase family, glutamate ligase domain CFI11_RS08415 PF08245 Mur ligase middle domain CFI11_RS08425 PF01098 Cell cycle protein CFI11_RS08430 PF04101 Glycosyltransferase family 28 C-terminal domain CFI11_RS08430 PF03033 Glycosyltransferase family 28 N-terminal domain CFI11_RS08435 PF08245 Mur ligase middle domain CFI11_RS08435 PF02875 Mur ligase family, glutamate ligase domain CFI11_RS08435 PF01225 Mur ligase family, catalytic domain CFI11_RS08445 PF01565 FAD binding domain CFI11_RS08445 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CFI11_RS08450 PF01820 D-ala D-ala ligase N-terminus CFI11_RS08450 PF07478 D-ala D-ala ligase C-terminus CFI11_RS08455 PF03799 Cell division protein FtsQ CFI11_RS08460 PF02491 SHS2 domain inserted in FTSA CFI11_RS08465 PF00091 Tubulin/FtsZ family, GTPase domain CFI11_RS08465 PF12327 FtsZ family, C-terminal domain CFI11_RS08470 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase CFI11_RS08475 PF13525 Outer membrane lipoprotein CFI11_RS08480 PF02463 RecF/RecN/SMC N terminal domain CFI11_RS08485 PF00654 Voltage gated chloride channel CFI11_RS08500 PF06213 Cobalamin biosynthesis protein CobT CFI11_RS08500 PF11775 Cobalamin biosynthesis protein CobT VWA domain CFI11_RS08515 PF12556 Cobaltochelatase CobS subunit N terminal CFI11_RS08515 PF08406 CbbQ/NirQ/NorQ C-terminal CFI11_RS08515 PF07728 AAA domain (dynein-related subfamily) CFI11_RS08520 PF00226 DnaJ domain CFI11_RS08520 PF01556 DnaJ C terminal domain CFI11_RS08520 PF00684 DnaJ central domain CFI11_RS08545 PF13545 Crp-like helix-turn-helix domain CFI11_RS08545 PF00027 Cyclic nucleotide-binding domain CFI11_RS08550 PF00596 Class II Aldolase and Adducin N-terminal domain CFI11_RS08565 PF02934 GatB/GatE catalytic domain CFI11_RS08565 PF02637 GatB domain CFI11_RS08575 PF12697 Alpha/beta hydrolase family CFI11_RS08590 PF17432 Domain of unknown function (DUF3458_C) ARM repeats CFI11_RS08590 PF11940 Domain of unknown function (DUF3458) Ig-like fold CFI11_RS08590 PF01433 Peptidase family M1 domain CFI11_RS08600 PF00875 DNA photolyase CFI11_RS08600 PF03441 FAD binding domain of DNA photolyase CFI11_RS08615 PF01274 Malate synthase CFI11_RS08625 PF07722 Peptidase C26 CFI11_RS08630 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CFI11_RS08630 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CFI11_RS08630 PF00034 Cytochrome c CFI11_RS08635 PF01799 [2Fe-2S] binding domain CFI11_RS08635 PF00111 2Fe-2S iron-sulfur cluster binding domain CFI11_RS08640 PF08361 MAATS-type transcriptional repressor, C-terminal region CFI11_RS08640 PF00440 Bacterial regulatory proteins, tetR family CFI11_RS08645 PF03301 Tryptophan 2,3-dioxygenase CFI11_RS08655 PF00266 Aminotransferase class-V CFI11_RS08665 PF00106 short chain dehydrogenase CFI11_RS08680 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch CFI11_RS08680 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CFI11_RS08680 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CFI11_RS08685 PF02233 NAD(P) transhydrogenase beta subunit CFI11_RS08695 PF13411 MerR HTH family regulatory protein CFI11_RS08700 PF02627 Carboxymuconolactone decarboxylase family CFI11_RS08710 PF04143 Sulphur transport CFI11_RS08720 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS08720 PF12911 N-terminal TM domain of oligopeptide transport permease C CFI11_RS08725 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS08730 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CFI11_RS08735 PF00005 ABC transporter CFI11_RS08735 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CFI11_RS08740 PF01546 Peptidase family M20/M25/M40 CFI11_RS08740 PF07687 Peptidase dimerisation domain CFI11_RS08745 PF01546 Peptidase family M20/M25/M40 CFI11_RS08745 PF07687 Peptidase dimerisation domain CFI11_RS08750 PF07687 Peptidase dimerisation domain CFI11_RS08750 PF01546 Peptidase family M20/M25/M40 CFI11_RS08755 PF00534 Glycosyl transferases group 1 CFI11_RS08760 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) CFI11_RS08765 PF04055 Radical SAM superfamily CFI11_RS08765 PF06463 Molybdenum Cofactor Synthesis C CFI11_RS08790 PF01380 SIS domain CFI11_RS08795 PF12804 MobA-like NTP transferase domain CFI11_RS08795 PF00132 Bacterial transferase hexapeptide (six repeats) CFI11_RS08800 PF13419 Haloacid dehalogenase-like hydrolase CFI11_RS08805 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CFI11_RS08815 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CFI11_RS08815 PF02770 Acyl-CoA dehydrogenase, middle domain CFI11_RS08815 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CFI11_RS08820 PF03922 OmpW family CFI11_RS08825 PF01039 Carboxyl transferase domain CFI11_RS08835 PF02785 Biotin carboxylase C-terminal domain CFI11_RS08835 PF00289 Biotin carboxylase, N-terminal domain CFI11_RS08835 PF00364 Biotin-requiring enzyme CFI11_RS08835 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CFI11_RS08840 PF00682 HMGL-like CFI11_RS08845 PF00378 Enoyl-CoA hydratase/isomerase CFI11_RS08850 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 CFI11_RS08855 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CFI11_RS08865 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CFI11_RS08870 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CFI11_RS08880 PF00829 Ribosomal prokaryotic L21 protein CFI11_RS08885 PF17272 Family of unknown function (DUF5337) CFI11_RS08890 PF10531 SLBB domain CFI11_RS08890 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CFI11_RS08890 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CFI11_RS08920 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CFI11_RS08920 PF00384 Molybdopterin oxidoreductase CFI11_RS08920 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal CFI11_RS08930 PF00146 NADH dehydrogenase CFI11_RS08940 PF12838 4Fe-4S dicluster domain CFI11_RS08950 PF02627 Carboxymuconolactone decarboxylase family CFI11_RS08955 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 CFI11_RS08960 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CFI11_RS08965 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CFI11_RS08965 PF00361 Proton-conducting membrane transporter CFI11_RS08970 PF00361 Proton-conducting membrane transporter CFI11_RS08975 PF00361 Proton-conducting membrane transporter CFI11_RS08980 PF02237 Biotin protein ligase C terminal domain CFI11_RS08980 PF03099 Biotin/lipoate A/B protein ligase family CFI11_RS08985 PF03309 Type III pantothenate kinase CFI11_RS08990 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CFI11_RS08990 PF12706 Beta-lactamase superfamily domain CFI11_RS08990 PF17770 Ribonuclease J C-terminal domain CFI11_RS08995 PF00271 Helicase conserved C-terminal domain CFI11_RS08995 PF00270 DEAD/DEAH box helicase CFI11_RS09010 PF16658 Class II release factor RF3, C-terminal domain CFI11_RS09010 PF03144 Elongation factor Tu domain 2 CFI11_RS09010 PF00009 Elongation factor Tu GTP binding domain CFI11_RS09025 PF18364 Molybdopterin oxidoreductase N-terminal domain CFI11_RS09025 PF00384 Molybdopterin oxidoreductase CFI11_RS09025 PF01568 Molydopterin dinucleotide binding domain CFI11_RS09040 PF08713 DNA alkylation repair enzyme CFI11_RS09045 PF08402 TOBE domain CFI11_RS09045 PF00005 ABC transporter CFI11_RS09050 PF01209 ubiE/COQ5 methyltransferase family CFI11_RS09055 PF03466 LysR substrate binding domain CFI11_RS09055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFI11_RS09060 PF13280 WYL domain CFI11_RS09060 PF08279 HTH domain CFI11_RS09070 PF02416 mttA/Hcf106 family CFI11_RS09075 PF02416 mttA/Hcf106 family CFI11_RS09080 PF00902 Sec-independent protein translocase protein (TatC) CFI11_RS09095 PF01476 LysM domain CFI11_RS09095 PF01551 Peptidase family M23 CFI11_RS09105 PF01975 Survival protein SurE CFI11_RS09110 PF00106 short chain dehydrogenase CFI11_RS09120 PF13537 Glutamine amidotransferase domain CFI11_RS09120 PF00156 Phosphoribosyl transferase domain CFI11_RS09130 PF06745 KaiC CFI11_RS09130 PF18073 Rubredoxin metal binding domain CFI11_RS09145 PF08502 LeuA allosteric (dimerisation) domain CFI11_RS09145 PF00682 HMGL-like CFI11_RS09155 PF00005 ABC transporter CFI11_RS09160 PF02405 Permease MlaE CFI11_RS09165 PF00842 Alanine racemase, C-terminal domain CFI11_RS09165 PF01168 Alanine racemase, N-terminal domain CFI11_RS09175 PF00772 DnaB-like helicase N terminal domain CFI11_RS09175 PF03796 DnaB-like helicase C terminal domain CFI11_RS09180 PF00156 Phosphoribosyl transferase domain CFI11_RS09185 PF01979 Amidohydrolase family CFI11_RS09225 PF02625 XdhC and CoxI family CFI11_RS09225 PF13478 XdhC Rossmann domain CFI11_RS09250 PF07690 Major Facilitator Superfamily CFI11_RS09260 PF13537 Glutamine amidotransferase domain CFI11_RS09260 PF00733 Asparagine synthase CFI11_RS09270 PF01619 Proline dehydrogenase CFI11_RS09280 PF00707 Translation initiation factor IF-3, C-terminal domain CFI11_RS09280 PF05198 Translation initiation factor IF-3, N-terminal domain CFI11_RS09290 PF07690 Major Facilitator Superfamily CFI11_RS09295 PF00970 Oxidoreductase FAD-binding domain CFI11_RS09295 PF00175 Oxidoreductase NAD-binding domain CFI11_RS09305 PF01507 Phosphoadenosine phosphosulfate reductase family CFI11_RS09310 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CFI11_RS09310 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CFI11_RS09320 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CFI11_RS09320 PF10414 Sirohaem synthase dimerisation region CFI11_RS09325 PF01037 Lrp/AsnC ligand binding domain CFI11_RS09330 PF00067 Cytochrome P450 CFI11_RS09335 PF00512 His Kinase A (phospho-acceptor) domain CFI11_RS09335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFI11_RS09335 PF02743 Cache domain CFI11_RS09340 PF00158 Sigma-54 interaction domain CFI11_RS09340 PF00072 Response regulator receiver domain CFI11_RS09340 PF02954 Bacterial regulatory protein, Fis family CFI11_RS09345 PF03480 Bacterial extracellular solute-binding protein, family 7 CFI11_RS09350 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component CFI11_RS09355 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CFI11_RS09360 PF00121 Triosephosphate isomerase CFI11_RS09370 PF01521 Iron-sulphur cluster biosynthesis CFI11_RS09380 PF01883 Iron-sulfur cluster assembly protein CFI11_RS09385 PF01702 Queuine tRNA-ribosyltransferase CFI11_RS09390 PF02190 ATP-dependent protease La (LON) substrate-binding domain CFI11_RS09390 PF00004 ATPase family associated with various cellular activities (AAA) CFI11_RS09390 PF05362 Lon protease (S16) C-terminal proteolytic domain CFI11_RS09405 PF00300 Histidine phosphatase superfamily (branch 1) CFI11_RS09410 PF02678 Pirin CFI11_RS09410 PF05726 Pirin C-terminal cupin domain CFI11_RS09435 PF00561 alpha/beta hydrolase fold CFI11_RS09445 PF01266 FAD dependent oxidoreductase CFI11_RS09450 PF00155 Aminotransferase class I and II CFI11_RS09460 PF04551 GcpE protein CFI11_RS09475 PF00155 Aminotransferase class I and II CFI11_RS09480 PF11741 AMIN domain CFI11_RS09480 PF01520 N-acetylmuramoyl-L-alanine amidase CFI11_RS09485 PF00905 Penicillin binding protein transpeptidase domain CFI11_RS09485 PF00912 Transglycosylase CFI11_RS09485 PF17092 Penicillin-binding protein OB-like domain CFI11_RS09495 PF03462 PCRF domain CFI11_RS09495 PF00472 RF-1 domain CFI11_RS09500 PF01425 Amidase CFI11_RS09515 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CFI11_RS09515 PF00355 Rieske [2Fe-2S] domain CFI11_RS09530 PF10369 Small subunit of acetolactate synthase CFI11_RS09545 PF00205 Thiamine pyrophosphate enzyme, central domain CFI11_RS09545 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CFI11_RS09545 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CFI11_RS09555 PF00072 Response regulator receiver domain CFI11_RS09555 PF00196 Bacterial regulatory proteins, luxR family CFI11_RS09560 PF17200 Single Cache domain 2 CFI11_RS09560 PF07730 Histidine kinase CFI11_RS09565 PF03480 Bacterial extracellular solute-binding protein, family 7 CFI11_RS09575 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CFI11_RS09585 PF00795 Carbon-nitrogen hydrolase CFI11_RS09590 PF02311 AraC-like ligand binding domain CFI11_RS09590 PF12833 Helix-turn-helix domain CFI11_RS09620 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CFI11_RS09625 PF04377 Arginine-tRNA-protein transferase, C terminus CFI11_RS09625 PF04376 Arginine-tRNA-protein transferase, N terminus CFI11_RS09725 PF10124 Mu-like prophage major head subunit gpT CFI11_RS09770 PF03237 Terminase-like family CFI11_RS09910 PF09039 Mu DNA binding, I gamma subdomain CFI11_RS09910 PF02316 Mu DNA-binding domain CFI11_RS09910 PF02914 Bacteriophage Mu transposase CFI11_RS09910 PF09299 Mu transposase, C-terminal CFI11_RS09950 PF03710 Glutamate-ammonia ligase adenylyltransferase CFI11_RS09950 PF08335 GlnD PII-uridylyltransferase CFI11_RS09960 PF10672 S-adenosylmethionine-dependent methyltransferase CFI11_RS09960 PF17785 PUA-like domain CFI11_RS09975 PF00067 Cytochrome P450 CFI11_RS09980 PF01037 Lrp/AsnC ligand binding domain CFI11_RS10010 PF03435 Saccharopine dehydrogenase NADP binding domain CFI11_RS10045 PF10431 C-terminal, D2-small domain, of ClpB protein CFI11_RS10045 PF02861 Clp amino terminal domain, pathogenicity island component CFI11_RS10045 PF17871 AAA lid domain CFI11_RS10045 PF07724 AAA domain (Cdc48 subfamily) CFI11_RS10045 PF00004 ATPase family associated with various cellular activities (AAA) CFI11_RS10050 PF01258 Prokaryotic dksA/traR C4-type zinc finger CFI11_RS10055 PF01494 FAD binding domain CFI11_RS10080 PF01521 Iron-sulphur cluster biosynthesis CFI11_RS10085 PF13286 Phosphohydrolase-associated domain CFI11_RS10085 PF01966 HD domain CFI11_RS10090 PF03485 Arginyl tRNA synthetase N terminal domain CFI11_RS10090 PF00750 tRNA synthetases class I (R) CFI11_RS10090 PF05746 DALR anticodon binding domain CFI11_RS10100 PF00933 Glycosyl hydrolase family 3 N terminal domain CFI11_RS10105 PF02616 Segregation and condensation protein ScpA CFI11_RS10110 PF04079 Segregation and condensation complex subunit ScpB CFI11_RS10130 PF00692 dUTPase CFI11_RS10145 PF00216 Bacterial DNA-binding protein CFI11_RS10150 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CFI11_RS10150 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CFI11_RS10155 PF02504 Fatty acid synthesis protein CFI11_RS10160 PF01783 Ribosomal L32p protein family CFI11_RS10180 PF00005 ABC transporter CFI11_RS10180 PF16326 ABC transporter C-terminal domain CFI11_RS10185 PF12464 Maltose acetyltransferase CFI11_RS10185 PF14602 Hexapeptide repeat of succinyl-transferase CFI11_RS10190 PF00106 short chain dehydrogenase CFI11_RS10205 PF00579 tRNA synthetases class I (W and Y) CFI11_RS10210 PF03702 Anhydro-N-acetylmuramic acid kinase CFI11_RS10240 PF03952 Enolase, N-terminal domain CFI11_RS10240 PF00113 Enolase, C-terminal TIM barrel domain CFI11_RS10245 PF00892 EamA-like transporter family CFI11_RS10255 PF01475 Ferric uptake regulator family CFI11_RS10260 PF00270 DEAD/DEAH box helicase CFI11_RS10260 PF00271 Helicase conserved C-terminal domain CFI11_RS10275 PF00892 EamA-like transporter family CFI11_RS10280 PF02696 Uncharacterized ACR, YdiU/UPF0061 family CFI11_RS10290 PF01156 Inosine-uridine preferring nucleoside hydrolase CFI11_RS10305 PF03819 MazG nucleotide pyrophosphohydrolase domain CFI11_RS10310 PF07687 Peptidase dimerisation domain CFI11_RS10310 PF01546 Peptidase family M20/M25/M40 CFI11_RS10315 PF00491 Arginase family CFI11_RS10320 PF00491 Arginase family CFI11_RS10335 PF03462 PCRF domain CFI11_RS10335 PF00472 RF-1 domain CFI11_RS10340 PF17827 PrmC N-terminal domain CFI11_RS10340 PF05175 Methyltransferase small domain CFI11_RS10350 PF00398 Ribosomal RNA adenine dimethylase CFI11_RS10355 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CFI11_RS10365 PF03968 OstA-like protein CFI11_RS10365 PF04453 LPS transport system D CFI11_RS10380 PF00883 Cytosol aminopeptidase family, catalytic domain CFI11_RS10395 PF12848 ABC transporter CFI11_RS10395 PF00005 ABC transporter CFI11_RS10400 PF00334 Nucleoside diphosphate kinase CFI11_RS10415 PF01679 Proteolipid membrane potential modulator CFI11_RS10425 PF08281 Sigma-70, region 4 CFI11_RS10425 PF04542 Sigma-70 region 2 CFI11_RS10445 PF00155 Aminotransferase class I and II CFI11_RS10455 PF01406 tRNA synthetases class I (C) catalytic domain CFI11_RS10455 PF09190 DALR domain CFI11_RS10460 PF08502 LeuA allosteric (dimerisation) domain CFI11_RS10460 PF00682 HMGL-like CFI11_RS10470 PF07690 Major Facilitator Superfamily CFI11_RS10480 PF00561 alpha/beta hydrolase fold CFI11_RS10485 PF00849 RNA pseudouridylate synthase CFI11_RS10495 PF02423 Ornithine cyclodeaminase/mu-crystallin family CFI11_RS10500 PF00491 Arginase family CFI11_RS10510 PF02600 Disulfide bond formation protein DsbB CFI11_RS10515 PF09335 SNARE associated Golgi protein CFI11_RS10530 PF12804 MobA-like NTP transferase domain CFI11_RS10530 PF00132 Bacterial transferase hexapeptide (six repeats) CFI11_RS10535 PF08669 Glycine cleavage T-protein C-terminal barrel domain CFI11_RS10535 PF01266 FAD dependent oxidoreductase CFI11_RS10535 PF01571 Aminomethyltransferase folate-binding domain CFI11_RS10535 PF16350 FAD dependent oxidoreductase central domain CFI11_RS10540 PF10011 Predicted membrane protein (DUF2254) CFI11_RS10545 PF08669 Glycine cleavage T-protein C-terminal barrel domain CFI11_RS10545 PF01571 Aminomethyltransferase folate-binding domain CFI11_RS10545 PF16350 FAD dependent oxidoreductase central domain CFI11_RS10545 PF01266 FAD dependent oxidoreductase CFI11_RS10555 PF00501 AMP-binding enzyme CFI11_RS10555 PF13193 AMP-binding enzyme C-terminal domain CFI11_RS10560 PF00571 CBS domain CFI11_RS10560 PF03471 Transporter associated domain CFI11_RS10560 PF01595 Cyclin M transmembrane N-terminal domain CFI11_RS10565 PF02899 Phage integrase, N-terminal SAM-like domain CFI11_RS10565 PF00589 Phage integrase family CFI11_RS10575 PF01202 Shikimate kinase CFI11_RS10580 PF01761 3-dehydroquinate synthase CFI11_RS10590 PF00436 Single-strand binding protein family CFI11_RS10595 PF01464 Transglycosylase SLT domain CFI11_RS10595 PF01551 Peptidase family M23 CFI11_RS10595 PF10145 Phage-related minor tail protein CFI11_RS10615 PF00005 ABC transporter CFI11_RS10615 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CFI11_RS10620 PF12911 N-terminal TM domain of oligopeptide transport permease C CFI11_RS10620 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS10625 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS10645 PF00696 Amino acid kinase family CFI11_RS10650 PF01765 Ribosome recycling factor CFI11_RS10655 PF01255 Putative undecaprenyl diphosphate synthase CFI11_RS10665 PF13288 DXP reductoisomerase C-terminal domain CFI11_RS10665 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CFI11_RS10665 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CFI11_RS10670 PF02163 Peptidase family M50 CFI11_RS10670 PF17820 PDZ domain CFI11_RS10675 PF07244 Surface antigen variable number repeat CFI11_RS10675 PF01103 Surface antigen CFI11_RS10685 PF07977 FabA-like domain CFI11_RS10690 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 CFI11_RS10690 PF00132 Bacterial transferase hexapeptide (six repeats) CFI11_RS10695 PF06230 LpxI C-terminal domain CFI11_RS10695 PF17930 LpxI N-terminal domain CFI11_RS10700 PF02684 Lipid-A-disaccharide synthetase CFI11_RS10720 PF13302 Acetyltransferase (GNAT) domain CFI11_RS10735 PF00486 Transcriptional regulatory protein, C terminal CFI11_RS10735 PF00072 Response regulator receiver domain CFI11_RS10740 PF00533 BRCA1 C Terminus (BRCT) domain CFI11_RS10740 PF01653 NAD-dependent DNA ligase adenylation domain CFI11_RS10740 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CFI11_RS10740 PF03120 NAD-dependent DNA ligase OB-fold domain CFI11_RS10740 PF12826 Helix-hairpin-helix motif CFI11_RS10745 PF00270 DEAD/DEAH box helicase CFI11_RS10745 PF00271 Helicase conserved C-terminal domain CFI11_RS10745 PF17191 RecG wedge domain CFI11_RS10755 PF01502 Phosphoribosyl-AMP cyclohydrolase CFI11_RS10760 PF00749 tRNA synthetases class I (E and Q), catalytic domain CFI11_RS10770 PF01134 Glucose inhibited division protein A CFI11_RS10780 PF00378 Enoyl-CoA hydratase/isomerase CFI11_RS10795 PF00392 Bacterial regulatory proteins, gntR family CFI11_RS10795 PF00155 Aminotransferase class I and II CFI11_RS10800 PF00572 Ribosomal protein L13 CFI11_RS10805 PF00380 Ribosomal protein S9/S16 CFI11_RS10815 PF00440 Bacterial regulatory proteins, tetR family CFI11_RS10815 PF13977 BetI-type transcriptional repressor, C-terminal CFI11_RS10820 PF03976 Polyphosphate kinase 2 (PPK2) CFI11_RS10825 PF00561 alpha/beta hydrolase fold CFI11_RS10830 PF04204 Homoserine O-succinyltransferase CFI11_RS10850 PF00892 EamA-like transporter family CFI11_RS10855 PF00958 GMP synthase C terminal domain CFI11_RS10855 PF00117 Glutamine amidotransferase class-I CFI11_RS10860 PF06253 Trimethylamine methyltransferase (MTTB) CFI11_RS10880 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family CFI11_RS10880 PF04055 Radical SAM superfamily CFI11_RS10885 PF00156 Phosphoribosyl transferase domain CFI11_RS10890 PF03364 Polyketide cyclase / dehydrase and lipid transport CFI11_RS10900 PF02464 Competence-damaged protein CFI11_RS10905 PF04608 Phosphatidylglycerophosphatase A CFI11_RS10910 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CFI11_RS10910 PF02542 YgbB family CFI11_RS10915 PF01207 Dihydrouridine synthase (Dus) CFI11_RS10920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFI11_RS10920 PF00512 His Kinase A (phospho-acceptor) domain CFI11_RS10925 PF02954 Bacterial regulatory protein, Fis family CFI11_RS10925 PF00072 Response regulator receiver domain CFI11_RS10925 PF14532 Sigma-54 interaction domain CFI11_RS10930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFI11_RS10930 PF00512 His Kinase A (phospho-acceptor) domain CFI11_RS10930 PF00672 HAMP domain CFI11_RS10930 PF00989 PAS fold CFI11_RS10935 PF00072 Response regulator receiver domain CFI11_RS10935 PF02954 Bacterial regulatory protein, Fis family CFI11_RS10935 PF00158 Sigma-54 interaction domain CFI11_RS10945 PF02254 TrkA-N domain CFI11_RS10945 PF02080 TrkA-C domain CFI11_RS10950 PF02386 Cation transport protein CFI11_RS10955 PF17209 Hfq protein CFI11_RS10960 PF16360 GTP-binding GTPase Middle Region CFI11_RS10960 PF13167 GTP-binding GTPase N-terminal CFI11_RS10960 PF01926 50S ribosome-binding GTPase CFI11_RS10970 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CFI11_RS10970 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CFI11_RS10985 PF00490 Delta-aminolevulinic acid dehydratase CFI11_RS10995 PF00270 DEAD/DEAH box helicase CFI11_RS10995 PF17757 UvrB interaction domain CFI11_RS10995 PF00271 Helicase conserved C-terminal domain CFI11_RS10995 PF03461 TRCF domain CFI11_RS10995 PF02559 CarD-like/TRCF domain CFI11_RS11005 PF07690 Major Facilitator Superfamily CFI11_RS11010 PF00027 Cyclic nucleotide-binding domain CFI11_RS11010 PF00520 Ion transport protein CFI11_RS11020 PF00501 AMP-binding enzyme CFI11_RS11020 PF13193 AMP-binding enzyme C-terminal domain CFI11_RS11035 PF00230 Major intrinsic protein CFI11_RS11050 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CFI11_RS11075 PF04227 Indigoidine synthase A like protein CFI11_RS11095 PF04349 Periplasmic glucan biosynthesis protein, MdoG CFI11_RS11100 PF02581 Thiamine monophosphate synthase CFI11_RS11110 PF00588 SpoU rRNA Methylase family CFI11_RS11115 PF02628 Cytochrome oxidase assembly protein CFI11_RS11120 PF02074 Carboxypeptidase Taq (M32) metallopeptidase CFI11_RS11130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFI11_RS11130 PF03466 LysR substrate binding domain CFI11_RS11135 PF00521 DNA gyrase/topoisomerase IV, subunit A CFI11_RS11135 PF03989 DNA gyrase C-terminal domain, beta-propeller CFI11_RS11140 PF06233 Usg-like family CFI11_RS11145 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CFI11_RS11145 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CFI11_RS11150 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CFI11_RS11155 PF00342 Phosphoglucose isomerase CFI11_RS11160 PF13193 AMP-binding enzyme C-terminal domain CFI11_RS11160 PF00501 AMP-binding enzyme CFI11_RS11185 PF00571 CBS domain CFI11_RS11185 PF00478 IMP dehydrogenase / GMP reductase domain CFI11_RS11190 PF01189 16S rRNA methyltransferase RsmB/F CFI11_RS11190 PF01029 NusB family CFI11_RS11195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFI11_RS11195 PF00512 His Kinase A (phospho-acceptor) domain CFI11_RS11195 PF13188 PAS domain CFI11_RS11195 PF00072 Response regulator receiver domain CFI11_RS11195 PF08448 PAS fold CFI11_RS11205 PF00154 recA bacterial DNA recombination protein CFI11_RS11210 PF02272 DHHA1 domain CFI11_RS11210 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CFI11_RS11210 PF01411 tRNA synthetases class II (A) CFI11_RS11220 PF00679 Elongation factor G C-terminus CFI11_RS11220 PF00009 Elongation factor Tu GTP binding domain CFI11_RS11220 PF03144 Elongation factor Tu domain 2 CFI11_RS11230 PF00180 Isocitrate/isopropylmalate dehydrogenase CFI11_RS11245 PF02129 X-Pro dipeptidyl-peptidase (S15 family) CFI11_RS11250 PF02082 Transcriptional regulator CFI11_RS11255 PF00266 Aminotransferase class-V CFI11_RS11260 PF01458 Uncharacterized protein family (UPF0051) CFI11_RS11275 PF01906 Putative heavy-metal-binding CFI11_RS11280 PF00005 ABC transporter CFI11_RS11285 PF01458 Uncharacterized protein family (UPF0051) CFI11_RS11300 PF00266 Aminotransferase class-V CFI11_RS11310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFI11_RS11310 PF03466 LysR substrate binding domain CFI11_RS11320 PF07690 Major Facilitator Superfamily CFI11_RS11325 PF13460 NAD(P)H-binding CFI11_RS11330 PF06441 Epoxide hydrolase N terminus CFI11_RS11335 PF03466 LysR substrate binding domain CFI11_RS11335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFI11_RS11345 PF03743 Bacterial conjugation TrbI-like protein CFI11_RS11355 PF04335 VirB8 protein CFI11_RS11360 PF04610 TrbL/VirB6 plasmid conjugal transfer protein CFI11_RS11375 PF03135 CagE, TrbE, VirB family, component of type IV transporter system CFI11_RS11390 PF00437 Type II/IV secretion system protein CFI11_RS11395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFI11_RS11395 PF03466 LysR substrate binding domain CFI11_RS11420 PF02534 Type IV secretory system Conjugative DNA transfer CFI11_RS11430 PF01464 Transglycosylase SLT domain CFI11_RS11435 PF10502 Signal peptidase, peptidase S26 CFI11_RS11480 PF05284 Protein of unknown function (DUF736) CFI11_RS11540 PF03880 DbpA RNA binding domain CFI11_RS11540 PF00270 DEAD/DEAH box helicase CFI11_RS11540 PF12343 Cold shock protein DEAD box A CFI11_RS11540 PF00271 Helicase conserved C-terminal domain CFI11_RS11565 PF00589 Phage integrase family CFI11_RS11565 PF02899 Phage integrase, N-terminal SAM-like domain CFI11_RS11570 PF05951 Bacterial protein of unknown function (DUF882) CFI11_RS11575 PF03734 L,D-transpeptidase catalytic domain CFI11_RS11575 PF01471 Putative peptidoglycan binding domain CFI11_RS11580 PF00132 Bacterial transferase hexapeptide (six repeats) CFI11_RS11580 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD CFI11_RS11585 PF00550 Phosphopantetheine attachment site CFI11_RS11590 PF00109 Beta-ketoacyl synthase, N-terminal domain CFI11_RS11590 PF02801 Beta-ketoacyl synthase, C-terminal domain CFI11_RS11600 PF05872 Bacterial protein of unknown function (DUF853) CFI11_RS11630 PF02653 Branched-chain amino acid transport system / permease component CFI11_RS11635 PF00005 ABC transporter CFI11_RS11640 PF00005 ABC transporter CFI11_RS11640 PF12399 Branched-chain amino acid ATP-binding cassette transporter CFI11_RS11650 PF07995 Glucose / Sorbosone dehydrogenase CFI11_RS11660 PF12833 Helix-turn-helix domain CFI11_RS11660 PF01965 DJ-1/PfpI family CFI11_RS11665 PF01474 Class-II DAHP synthetase family CFI11_RS11675 PF03755 YicC-like family, N-terminal region CFI11_RS11675 PF08340 Domain of unknown function (DUF1732) CFI11_RS11680 PF00625 Guanylate kinase CFI11_RS11685 PF00132 Bacterial transferase hexapeptide (six repeats) CFI11_RS11690 PF01053 Cys/Met metabolism PLP-dependent enzyme CFI11_RS11695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFI11_RS11695 PF00512 His Kinase A (phospho-acceptor) domain CFI11_RS11695 PF16736 Single Cache-like CFI11_RS11695 PF00989 PAS fold CFI11_RS11705 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS11710 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS11715 PF00005 ABC transporter CFI11_RS11720 PF01895 PhoU domain CFI11_RS11725 PF00072 Response regulator receiver domain CFI11_RS11725 PF00486 Transcriptional regulatory protein, C terminal CFI11_RS11730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFI11_RS11730 PF03466 LysR substrate binding domain CFI11_RS11735 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CFI11_RS11735 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CFI11_RS11735 PF02770 Acyl-CoA dehydrogenase, middle domain CFI11_RS11740 PF02779 Transketolase, pyrimidine binding domain CFI11_RS11740 PF02780 Transketolase, C-terminal domain CFI11_RS11745 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CFI11_RS11745 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CFI11_RS11745 PF00205 Thiamine pyrophosphate enzyme, central domain CFI11_RS11750 PF02515 CoA-transferase family III CFI11_RS11765 PF04349 Periplasmic glucan biosynthesis protein, MdoG CFI11_RS11770 PF13632 Glycosyl transferase family group 2 CFI11_RS11785 PF01103 Surface antigen CFI11_RS11785 PF17243 POTRA domain TamA domain 1 CFI11_RS11785 PF07244 Surface antigen variable number repeat CFI11_RS11800 PF13193 AMP-binding enzyme C-terminal domain CFI11_RS11800 PF00501 AMP-binding enzyme CFI11_RS11805 PF02770 Acyl-CoA dehydrogenase, middle domain CFI11_RS11805 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CFI11_RS11805 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CFI11_RS11830 PF00501 AMP-binding enzyme CFI11_RS11830 PF13193 AMP-binding enzyme C-terminal domain CFI11_RS11835 PF00144 Beta-lactamase CFI11_RS11840 PF00378 Enoyl-CoA hydratase/isomerase CFI11_RS11845 PF02798 Glutathione S-transferase, N-terminal domain CFI11_RS11845 PF00043 Glutathione S-transferase, C-terminal domain CFI11_RS11850 PF00106 short chain dehydrogenase CFI11_RS11855 PF01323 DSBA-like thioredoxin domain CFI11_RS11880 PF00106 short chain dehydrogenase CFI11_RS11885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFI11_RS11885 PF03466 LysR substrate binding domain CFI11_RS11900 PF01810 LysE type translocator CFI11_RS11915 PF00005 ABC transporter CFI11_RS11920 PF12399 Branched-chain amino acid ATP-binding cassette transporter CFI11_RS11920 PF00005 ABC transporter CFI11_RS11930 PF02653 Branched-chain amino acid transport system / permease component CFI11_RS11940 PF09339 IclR helix-turn-helix domain CFI11_RS11960 PF00108 Thiolase, N-terminal domain CFI11_RS11960 PF02803 Thiolase, C-terminal domain CFI11_RS11965 PF00106 short chain dehydrogenase CFI11_RS11975 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CFI11_RS11975 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CFI11_RS11980 PF02770 Acyl-CoA dehydrogenase, middle domain CFI11_RS11980 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CFI11_RS11980 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CFI11_RS11985 PF00550 Phosphopantetheine attachment site CFI11_RS11985 PF14765 Polyketide synthase dehydratase CFI11_RS11985 PF00109 Beta-ketoacyl synthase, N-terminal domain CFI11_RS11985 PF08240 Alcohol dehydrogenase GroES-like domain CFI11_RS11985 PF02801 Beta-ketoacyl synthase, C-terminal domain CFI11_RS11985 PF00698 Acyl transferase domain CFI11_RS11985 PF16197 Ketoacyl-synthetase C-terminal extension CFI11_RS11985 PF00107 Zinc-binding dehydrogenase CFI11_RS11985 PF08659 KR domain CFI11_RS11995 PF00107 Zinc-binding dehydrogenase CFI11_RS11995 PF16884 N-terminal domain of oxidoreductase CFI11_RS12000 PF01575 MaoC like domain CFI11_RS12005 PF01220 Dehydroquinase class II CFI11_RS12010 PF00196 Bacterial regulatory proteins, luxR family CFI11_RS12010 PF03472 Autoinducer binding domain CFI11_RS12020 PF00889 Elongation factor TS CFI11_RS12025 PF00318 Ribosomal protein S2 CFI11_RS12045 PF10090 Histidine phosphotransferase C-terminal domain CFI11_RS12050 PF00171 Aldehyde dehydrogenase family CFI11_RS12055 PF01472 PUA domain CFI11_RS12055 PF00696 Amino acid kinase family CFI11_RS12060 PF01926 50S ribosome-binding GTPase CFI11_RS12060 PF01018 GTP1/OBG CFI11_RS12075 PF01810 LysE type translocator CFI11_RS12090 PF01016 Ribosomal L27 protein CFI11_RS12095 PF00829 Ribosomal prokaryotic L21 protein CFI11_RS12125 PF09857 Putative toxin of bacterial toxin-antitoxin pair CFI11_RS12130 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CFI11_RS12130 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CFI11_RS12140 PF13439 Glycosyltransferase Family 4 CFI11_RS12140 PF00534 Glycosyl transferases group 1 CFI11_RS12145 PF01370 NAD dependent epimerase/dehydratase family CFI11_RS12160 PF02219 Methylenetetrahydrofolate reductase CFI11_RS12170 PF02541 Ppx/GppA phosphatase family CFI11_RS12175 PF01728 FtsJ-like methyltransferase CFI11_RS12195 PF00550 Phosphopantetheine attachment site CFI11_RS12195 PF00698 Acyl transferase domain CFI11_RS12195 PF00109 Beta-ketoacyl synthase, N-terminal domain CFI11_RS12195 PF02801 Beta-ketoacyl synthase, C-terminal domain CFI11_RS12195 PF16197 Ketoacyl-synthetase C-terminal extension CFI11_RS12195 PF00668 Condensation domain CFI11_RS12205 PF00501 AMP-binding enzyme CFI11_RS12205 PF00975 Thioesterase domain CFI11_RS12205 PF00668 Condensation domain CFI11_RS12205 PF13193 AMP-binding enzyme C-terminal domain CFI11_RS12205 PF13193 AMP-binding enzyme C-terminal domain CFI11_RS12205 PF00501 AMP-binding enzyme CFI11_RS12205 PF00550 Phosphopantetheine attachment site CFI11_RS12205 PF00668 Condensation domain CFI11_RS12205 PF00550 Phosphopantetheine attachment site CFI11_RS12205 PF00975 Thioesterase domain CFI11_RS12210 PF17837 4'-phosphopantetheinyl transferase N-terminal domain CFI11_RS12210 PF01648 4'-phosphopantetheinyl transferase superfamily CFI11_RS12240 PF02397 Bacterial sugar transferase CFI11_RS12255 PF01494 FAD binding domain CFI11_RS12270 PF02653 Branched-chain amino acid transport system / permease component CFI11_RS12275 PF00005 ABC transporter CFI11_RS12285 PF00857 Isochorismatase family CFI11_RS12290 PF02538 Hydantoinase B/oxoprolinase CFI11_RS12295 PF01968 Hydantoinase/oxoprolinase CFI11_RS12295 PF05378 Hydantoinase/oxoprolinase N-terminal region CFI11_RS12305 PF02515 CoA-transferase family III CFI11_RS12310 PF00682 HMGL-like CFI11_RS12315 PF00392 Bacterial regulatory proteins, gntR family CFI11_RS12315 PF07729 FCD domain CFI11_RS12335 PF00005 ABC transporter CFI11_RS12335 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CFI11_RS12340 PF00005 ABC transporter CFI11_RS12340 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CFI11_RS12345 PF12911 N-terminal TM domain of oligopeptide transport permease C CFI11_RS12345 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS12350 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS12355 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CFI11_RS12370 PF01968 Hydantoinase/oxoprolinase CFI11_RS12370 PF05378 Hydantoinase/oxoprolinase N-terminal region CFI11_RS12390 PF02653 Branched-chain amino acid transport system / permease component CFI11_RS12400 PF00005 ABC transporter CFI11_RS12400 PF12399 Branched-chain amino acid ATP-binding cassette transporter CFI11_RS12405 PF00005 ABC transporter CFI11_RS12410 PF12802 MarR family CFI11_RS12420 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CFI11_RS12420 PF01799 [2Fe-2S] binding domain CFI11_RS12420 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CFI11_RS12420 PF00111 2Fe-2S iron-sulfur cluster binding domain CFI11_RS12425 PF00037 4Fe-4S binding domain CFI11_RS12450 PF00440 Bacterial regulatory proteins, tetR family CFI11_RS12450 PF08359 YsiA-like protein, C-terminal region CFI11_RS12455 PF00144 Beta-lactamase CFI11_RS12460 PF02153 Prephenate dehydrogenase CFI11_RS12465 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal CFI11_RS12465 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal CFI11_RS12470 PF01063 Amino-transferase class IV CFI11_RS12480 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CFI11_RS12485 PF01494 FAD binding domain CFI11_RS12495 PF03466 LysR substrate binding domain CFI11_RS12495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFI11_RS12505 PF13409 Glutathione S-transferase, N-terminal domain CFI11_RS12525 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS12530 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS12535 PF00005 ABC transporter CFI11_RS12535 PF08402 TOBE domain CFI11_RS12545 PF08220 DeoR-like helix-turn-helix domain CFI11_RS12545 PF00455 DeoR C terminal sensor domain CFI11_RS12580 PF01979 Amidohydrolase family CFI11_RS12590 PF12795 Mechanosensitive ion channel porin domain CFI11_RS12590 PF00924 Mechanosensitive ion channel CFI11_RS12590 PF12794 Mechanosensitive ion channel inner membrane domain 1 CFI11_RS12595 PF00291 Pyridoxal-phosphate dependent enzyme CFI11_RS12595 PF00571 CBS domain CFI11_RS12600 PF00293 NUDIX domain CFI11_RS12615 PF00875 DNA photolyase CFI11_RS12615 PF03441 FAD binding domain of DNA photolyase CFI11_RS12620 PF00266 Aminotransferase class-V CFI11_RS12625 PF02028 BCCT, betaine/carnitine/choline family transporter CFI11_RS12630 PF00107 Zinc-binding dehydrogenase CFI11_RS12635 PF08669 Glycine cleavage T-protein C-terminal barrel domain CFI11_RS12635 PF01571 Aminomethyltransferase folate-binding domain CFI11_RS12655 PF00392 Bacterial regulatory proteins, gntR family CFI11_RS12655 PF07729 FCD domain CFI11_RS12690 PF02417 Chromate transporter CFI11_RS12700 PF00206 Lyase CFI11_RS12700 PF10415 Fumarase C C-terminus CFI11_RS12720 PF00274 Fructose-bisphosphate aldolase class-I CFI11_RS12725 PF00067 Cytochrome P450 CFI11_RS12735 PF02683 Cytochrome C biogenesis protein transmembrane region CFI11_RS12740 PF01206 Sulfurtransferase TusA CFI11_RS12745 PF12111 Polyribonucleotide phosphorylase C terminal CFI11_RS12745 PF00575 S1 RNA binding domain CFI11_RS12745 PF10150 Ribonuclease E/G family CFI11_RS12760 PF00072 Response regulator receiver domain CFI11_RS12760 PF02954 Bacterial regulatory protein, Fis family CFI11_RS12760 PF00158 Sigma-54 interaction domain CFI11_RS12765 PF00512 His Kinase A (phospho-acceptor) domain CFI11_RS12765 PF02743 Cache domain CFI11_RS12765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFI11_RS12775 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase CFI11_RS12780 PF01259 SAICAR synthetase CFI11_RS12790 PF00152 tRNA synthetases class II (D, K and N) CFI11_RS12790 PF16995 Transmembrane region of lysyl-tRNA synthetase CFI11_RS12790 PF01336 OB-fold nucleic acid binding domain CFI11_RS12790 PF09924 Uncharacterised conserved protein (DUF2156) CFI11_RS12795 PF02310 B12 binding domain CFI11_RS12795 PF00809 Pterin binding enzyme CFI11_RS12795 PF02607 B12 binding domain CFI11_RS12795 PF02965 Vitamin B12 dependent methionine synthase, activation domain CFI11_RS12795 PF02574 Homocysteine S-methyltransferase CFI11_RS12800 PF04055 Radical SAM superfamily CFI11_RS12805 PF02607 B12 binding domain CFI11_RS12805 PF02310 B12 binding domain CFI11_RS12815 PF02657 Fe-S metabolism associated domain CFI11_RS12825 PF01612 3'-5' exonuclease CFI11_RS12825 PF00570 HRDC domain CFI11_RS12830 PF00551 Formyl transferase CFI11_RS12835 PF02769 AIR synthase related protein, C-terminal domain CFI11_RS12835 PF00586 AIR synthase related protein, N-terminal domain CFI11_RS12850 PF00672 HAMP domain CFI11_RS12850 PF00512 His Kinase A (phospho-acceptor) domain CFI11_RS12850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFI11_RS12855 PF16123 Hydroxyacylglutathione hydrolase C-terminus CFI11_RS12855 PF00753 Metallo-beta-lactamase superfamily CFI11_RS12870 PF02867 Ribonucleotide reductase, barrel domain CFI11_RS12870 PF08471 Class II vitamin B12-dependent ribonucleotide reductase CFI11_RS12885 PF12833 Helix-turn-helix domain CFI11_RS12885 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CFI11_RS12885 PF02805 Metal binding domain of Ada CFI11_RS12885 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CFI11_RS12920 PF13614 AAA domain CFI11_RS12940 PF00959 Phage lysozyme CFI11_RS13055 PF04860 Phage portal protein CFI11_RS13125 PF13356 Arm DNA-binding domain CFI11_RS13125 PF00589 Phage integrase family CFI11_RS13200 PF00313 'Cold-shock' DNA-binding domain CFI11_RS13205 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region CFI11_RS13205 PF01243 Pyridoxamine 5'-phosphate oxidase CFI11_RS13215 PF01810 LysE type translocator CFI11_RS13220 PF01810 LysE type translocator CFI11_RS13225 PF00156 Phosphoribosyl transferase domain CFI11_RS13230 PF00155 Aminotransferase class I and II CFI11_RS13240 PF00425 chorismate binding enzyme CFI11_RS13240 PF04715 Anthranilate synthase component I, N terminal region CFI11_RS13255 PF00117 Glutamine amidotransferase class-I CFI11_RS13260 PF02885 Glycosyl transferase family, helical bundle domain CFI11_RS13260 PF00591 Glycosyl transferase family, a/b domain CFI11_RS13265 PF00218 Indole-3-glycerol phosphate synthase CFI11_RS13270 PF01967 MoaC family CFI11_RS13275 PF00994 Probable molybdopterin binding domain CFI11_RS13275 PF03453 MoeA N-terminal region (domain I and II) CFI11_RS13275 PF03454 MoeA C-terminal region (domain IV) CFI11_RS13280 PF01726 LexA DNA binding domain CFI11_RS13280 PF00717 Peptidase S24-like CFI11_RS13285 PF00753 Metallo-beta-lactamase superfamily CFI11_RS13285 PF13567 Domain of unknown function (DUF4131) CFI11_RS13285 PF03772 Competence protein CFI11_RS13290 PF00749 tRNA synthetases class I (E and Q), catalytic domain CFI11_RS13295 PF00285 Citrate synthase, C-terminal domain CFI11_RS13320 PF00378 Enoyl-CoA hydratase/isomerase CFI11_RS13325 PF03918 Cytochrome C biogenesis protein CFI11_RS13330 PF01578 Cytochrome C assembly protein CFI11_RS13330 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal CFI11_RS13345 PF03100 CcmE CFI11_RS13350 PF02774 Semialdehyde dehydrogenase, dimerisation domain CFI11_RS13350 PF01118 Semialdehyde dehydrogenase, NAD binding domain CFI11_RS13355 PF01177 Asp/Glu/Hydantoin racemase CFI11_RS13370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFI11_RS13370 PF03466 LysR substrate binding domain CFI11_RS13385 PF00586 AIR synthase related protein, N-terminal domain CFI11_RS13385 PF02769 AIR synthase related protein, C-terminal domain CFI11_RS13385 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CFI11_RS13400 PF00462 Glutaredoxin CFI11_RS13415 PF02780 Transketolase, C-terminal domain CFI11_RS13415 PF00456 Transketolase, thiamine diphosphate binding domain CFI11_RS13415 PF02779 Transketolase, pyrimidine binding domain CFI11_RS13425 PF05661 Protein of unknown function (DUF808) CFI11_RS13430 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CFI11_RS13430 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CFI11_RS13435 PF01467 Cytidylyltransferase-like CFI11_RS13445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFI11_RS13445 PF03466 LysR substrate binding domain CFI11_RS13450 PF00171 Aldehyde dehydrogenase family CFI11_RS13465 PF03734 L,D-transpeptidase catalytic domain CFI11_RS13470 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CFI11_RS13470 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CFI11_RS13470 PF02770 Acyl-CoA dehydrogenase, middle domain CFI11_RS13475 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CFI11_RS13475 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CFI11_RS13485 PF00990 Diguanylate cyclase, GGDEF domain CFI11_RS13485 PF10442 FIST C domain CFI11_RS13485 PF08495 FIST N domain CFI11_RS13485 PF00563 EAL domain CFI11_RS13495 PF17760 UvrA interaction domain CFI11_RS13495 PF00005 ABC transporter CFI11_RS13495 PF17755 UvrA DNA-binding domain CFI11_RS13505 PF07992 Pyridine nucleotide-disulphide oxidoreductase CFI11_RS13505 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CFI11_RS13520 PF02547 Queuosine biosynthesis protein CFI11_RS13530 PF00578 AhpC/TSA family CFI11_RS13535 PF04305 Protein of unknown function (DUF455) CFI11_RS13540 PF01551 Peptidase family M23 CFI11_RS13550 PF07690 Major Facilitator Superfamily CFI11_RS13560 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CFI11_RS13565 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CFI11_RS13570 PF00162 Phosphoglycerate kinase CFI11_RS13575 PF04977 Septum formation initiator CFI11_RS13580 PF00676 Dehydrogenase E1 component CFI11_RS13585 PF00364 Biotin-requiring enzyme CFI11_RS13585 PF02780 Transketolase, C-terminal domain CFI11_RS13585 PF02779 Transketolase, pyrimidine binding domain CFI11_RS13590 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CFI11_RS13590 PF00364 Biotin-requiring enzyme CFI11_RS13590 PF02817 e3 binding domain CFI11_RS13595 PF00132 Bacterial transferase hexapeptide (six repeats) CFI11_RS13595 PF06426 Serine acetyltransferase, N-terminal CFI11_RS13675 PF04860 Phage portal protein CFI11_RS13690 PF02618 YceG-like family CFI11_RS13695 PF00109 Beta-ketoacyl synthase, N-terminal domain CFI11_RS13695 PF02801 Beta-ketoacyl synthase, C-terminal domain CFI11_RS13705 PF00977 Histidine biosynthesis protein CFI11_RS13715 PF00550 Phosphopantetheine attachment site CFI11_RS13725 PF00698 Acyl transferase domain CFI11_RS13730 PF01292 Prokaryotic cytochrome b561 CFI11_RS13735 PF04264 YceI-like domain CFI11_RS13745 PF01250 Ribosomal protein S6 CFI11_RS13750 PF01084 Ribosomal protein S18 CFI11_RS13755 PF01281 Ribosomal protein L9, N-terminal domain CFI11_RS13755 PF03948 Ribosomal protein L9, C-terminal domain CFI11_RS13760 PF13443 Cro/C1-type HTH DNA-binding domain CFI11_RS13785 PF02872 5'-nucleotidase, C-terminal domain CFI11_RS13785 PF00149 Calcineurin-like phosphoesterase CFI11_RS13790 PF05697 Bacterial trigger factor protein (TF) CFI11_RS13790 PF05698 Bacterial trigger factor protein (TF) C-terminus CFI11_RS13790 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CFI11_RS13805 PF00873 AcrB/AcrD/AcrF family CFI11_RS13855 PF03389 MobA/MobL family CFI11_RS13855 PF01443 Viral (Superfamily 1) RNA helicase CFI11_RS13855 PF17841 BID domain of Bartonella effector protein (Bep) CFI11_RS13865 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH CFI11_RS13875 PF01555 DNA methylase CFI11_RS13885 PF00816 H-NS histone family CFI11_RS13920 PF07943 Penicillin-binding protein 5, C-terminal domain CFI11_RS13920 PF00768 D-alanyl-D-alanine carboxypeptidase CFI11_RS13940 PF08379 Bacterial transglutaminase-like N-terminal region CFI11_RS13940 PF01841 Transglutaminase-like superfamily CFI11_RS13950 PF00270 DEAD/DEAH box helicase CFI11_RS13950 PF00271 Helicase conserved C-terminal domain CFI11_RS13955 PF00313 'Cold-shock' DNA-binding domain CFI11_RS13975 PF02525 Flavodoxin-like fold CFI11_RS13985 PF06689 ClpX C4-type zinc finger CFI11_RS13985 PF10431 C-terminal, D2-small domain, of ClpB protein CFI11_RS13985 PF07724 AAA domain (Cdc48 subfamily) CFI11_RS13995 PF01965 DJ-1/PfpI family CFI11_RS14095 PF03099 Biotin/lipoate A/B protein ligase family CFI11_RS14110 PF00115 Cytochrome C and Quinol oxidase polypeptide I CFI11_RS14130 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CFI11_RS14130 PF00117 Glutamine amidotransferase class-I CFI11_RS14140 PF00392 Bacterial regulatory proteins, gntR family CFI11_RS14140 PF07729 FCD domain CFI11_RS14155 PF01494 FAD binding domain CFI11_RS14170 PF01037 Lrp/AsnC ligand binding domain CFI11_RS14170 PF13404 AsnC-type helix-turn-helix domain CFI11_RS14180 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CFI11_RS14180 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CFI11_RS14190 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CFI11_RS14190 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CFI11_RS14190 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CFI11_RS14190 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CFI11_RS14195 PF00809 Pterin binding enzyme CFI11_RS14200 PF02152 Dihydroneopterin aldolase CFI11_RS14205 PF07486 Cell Wall Hydrolase CFI11_RS14205 PF01471 Putative peptidoglycan binding domain CFI11_RS14210 PF02896 PEP-utilising enzyme, TIM barrel domain CFI11_RS14210 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CFI11_RS14210 PF00391 PEP-utilising enzyme, mobile domain CFI11_RS14215 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CFI11_RS14230 PF00501 AMP-binding enzyme CFI11_RS14230 PF13193 AMP-binding enzyme C-terminal domain CFI11_RS14230 PF16177 Acetyl-coenzyme A synthetase N-terminus CFI11_RS14235 PF05191 Adenylate kinase, active site lid CFI11_RS14245 PF00474 Sodium:solute symporter family CFI11_RS14250 PF00478 IMP dehydrogenase / GMP reductase domain CFI11_RS14250 PF00571 CBS domain CFI11_RS14260 PF00929 Exonuclease CFI11_RS14265 PF01613 Flavin reductase like domain CFI11_RS14280 PF10609 NUBPL iron-transfer P-loop NTPase CFI11_RS14280 PF01883 Iron-sulfur cluster assembly protein CFI11_RS14320 PF01568 Molydopterin dinucleotide binding domain CFI11_RS14320 PF00384 Molybdopterin oxidoreductase CFI11_RS14320 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CFI11_RS14325 PF13247 4Fe-4S dicluster domain CFI11_RS14340 PF00034 Cytochrome c CFI11_RS14350 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS14355 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS14360 PF00005 ABC transporter CFI11_RS14365 PF01979 Amidohydrolase family CFI11_RS14375 PF01546 Peptidase family M20/M25/M40 CFI11_RS14375 PF07687 Peptidase dimerisation domain CFI11_RS14380 PF08362 YcdC-like protein, C-terminal region CFI11_RS14380 PF00440 Bacterial regulatory proteins, tetR family CFI11_RS14390 PF01180 Dihydroorotate dehydrogenase CFI11_RS14395 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CFI11_RS14395 PF07992 Pyridine nucleotide-disulphide oxidoreductase CFI11_RS14405 PF12849 PBP superfamily domain CFI11_RS14410 PF00005 ABC transporter CFI11_RS14415 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS14435 PF01053 Cys/Met metabolism PLP-dependent enzyme CFI11_RS14440 PF04402 Protein of unknown function (DUF541) CFI11_RS14455 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CFI11_RS14465 PF00999 Sodium/hydrogen exchanger family CFI11_RS14465 PF02254 TrkA-N domain CFI11_RS14470 PF02277 Phosphoribosyltransferase CFI11_RS14475 PF02654 Cobalamin-5-phosphate synthase CFI11_RS14480 PF02559 CarD-like/TRCF domain CFI11_RS14485 PF11953 Domain of unknown function (DUF3470) CFI11_RS14485 PF00037 4Fe-4S binding domain CFI11_RS14490 PF01479 S4 domain CFI11_RS14520 PF04675 DNA ligase N terminus CFI11_RS14520 PF01068 ATP dependent DNA ligase domain CFI11_RS14520 PF04679 ATP dependent DNA ligase C terminal region CFI11_RS14545 PF01244 Membrane dipeptidase (Peptidase family M19) CFI11_RS14550 PF04545 Sigma-70, region 4 CFI11_RS14550 PF04542 Sigma-70 region 2 CFI11_RS14550 PF00140 Sigma-70 factor, region 1.2 CFI11_RS14555 PF00849 RNA pseudouridylate synthase CFI11_RS14570 PF00583 Acetyltransferase (GNAT) family CFI11_RS14610 PF00005 ABC transporter CFI11_RS14615 PF00501 AMP-binding enzyme CFI11_RS14615 PF13193 AMP-binding enzyme C-terminal domain CFI11_RS14615 PF16177 Acetyl-coenzyme A synthetase N-terminus CFI11_RS14630 PF01968 Hydantoinase/oxoprolinase CFI11_RS14630 PF05378 Hydantoinase/oxoprolinase N-terminal region CFI11_RS14635 PF01266 FAD dependent oxidoreductase CFI11_RS14645 PF09339 IclR helix-turn-helix domain CFI11_RS14645 PF01614 Bacterial transcriptional regulator CFI11_RS14650 PF00384 Molybdopterin oxidoreductase CFI11_RS14650 PF01568 Molydopterin dinucleotide binding domain CFI11_RS14655 PF01053 Cys/Met metabolism PLP-dependent enzyme CFI11_RS14665 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS14670 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS14675 PF00497 Bacterial extracellular solute-binding proteins, family 3 CFI11_RS14685 PF07724 AAA domain (Cdc48 subfamily) CFI11_RS14685 PF00004 ATPase family associated with various cellular activities (AAA) CFI11_RS14685 PF10431 C-terminal, D2-small domain, of ClpB protein CFI11_RS14685 PF17871 AAA lid domain CFI11_RS14695 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 CFI11_RS14700 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath CFI11_RS14705 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath CFI11_RS14720 PF05947 Type VI secretion system, TssF CFI11_RS14735 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE CFI11_RS14740 PF00691 OmpA family CFI11_RS14740 PF13677 Membrane MotB of proton-channel complex MotA/MotB CFI11_RS14745 PF06744 Type VI secretion protein IcmF C-terminal CFI11_RS14745 PF14331 ImcF-related N-terminal domain CFI11_RS14745 PF06761 Intracellular multiplication and human macrophage-killing CFI11_RS14755 PF02563 Polysaccharide biosynthesis/export protein CFI11_RS14765 PF00475 Imidazoleglycerol-phosphate dehydratase CFI11_RS14770 PF00117 Glutamine amidotransferase class-I CFI11_RS14795 PF00977 Histidine biosynthesis protein CFI11_RS14805 PF03625 Domain of unknown function DUF302 CFI11_RS14805 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CFI11_RS14810 PF00977 Histidine biosynthesis protein CFI11_RS14815 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CFI11_RS14830 PF13380 CoA binding domain CFI11_RS14845 PF08032 RNA 2'-O ribose methyltransferase substrate binding CFI11_RS14845 PF00588 SpoU rRNA Methylase family CFI11_RS14855 PF00356 Bacterial regulatory proteins, lacI family CFI11_RS14865 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS14870 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS14875 PF08402 TOBE domain CFI11_RS14875 PF00005 ABC transporter CFI11_RS14885 PF01232 Mannitol dehydrogenase Rossmann domain CFI11_RS14885 PF08125 Mannitol dehydrogenase C-terminal domain CFI11_RS14890 PF00294 pfkB family carbohydrate kinase CFI11_RS14895 PF03459 TOBE domain CFI11_RS14895 PF10649 Protein of unknown function (DUF2478) CFI11_RS14895 PF00005 ABC transporter CFI11_RS14900 PF03453 MoeA N-terminal region (domain I and II) CFI11_RS14900 PF00994 Probable molybdopterin binding domain CFI11_RS14900 PF03454 MoeA C-terminal region (domain IV) CFI11_RS14905 PF03453 MoeA N-terminal region (domain I and II) CFI11_RS14905 PF00994 Probable molybdopterin binding domain CFI11_RS14905 PF03454 MoeA C-terminal region (domain IV) CFI11_RS14915 PF18465 Rieske 3Fe-4S CFI11_RS14915 PF00384 Molybdopterin oxidoreductase CFI11_RS14915 PF01568 Molydopterin dinucleotide binding domain CFI11_RS14925 PF03150 Di-haem cytochrome c peroxidase CFI11_RS14930 PF03150 Di-haem cytochrome c peroxidase CFI11_RS14935 PF03466 LysR substrate binding domain CFI11_RS14935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFI11_RS14940 PF00141 Peroxidase CFI11_RS14965 PF00196 Bacterial regulatory proteins, luxR family CFI11_RS14965 PF03472 Autoinducer binding domain CFI11_RS14975 PF01266 FAD dependent oxidoreductase CFI11_RS14985 PF01979 Amidohydrolase family CFI11_RS14990 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS14995 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS15005 PF00005 ABC transporter CFI11_RS15005 PF08402 TOBE domain CFI11_RS15010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFI11_RS15010 PF03466 LysR substrate binding domain CFI11_RS15015 PF00795 Carbon-nitrogen hydrolase CFI11_RS15040 PF01032 FecCD transport family CFI11_RS15045 PF01032 FecCD transport family CFI11_RS15050 PF00005 ABC transporter CFI11_RS15055 PF00005 ABC transporter CFI11_RS15055 PF00664 ABC transporter transmembrane region CFI11_RS15060 PF07715 TonB-dependent Receptor Plug Domain CFI11_RS15060 PF00593 TonB dependent receptor CFI11_RS15075 PF13977 BetI-type transcriptional repressor, C-terminal CFI11_RS15075 PF00440 Bacterial regulatory proteins, tetR family CFI11_RS15080 PF00893 Small Multidrug Resistance protein CFI11_RS15085 PF01047 MarR family CFI11_RS15095 PF01042 Endoribonuclease L-PSP CFI11_RS15115 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS15120 PF03459 TOBE domain CFI11_RS15120 PF00005 ABC transporter CFI11_RS15125 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) CFI11_RS15140 PF00753 Metallo-beta-lactamase superfamily CFI11_RS15155 PF16736 Single Cache-like CFI11_RS15155 PF00989 PAS fold CFI11_RS15155 PF00512 His Kinase A (phospho-acceptor) domain CFI11_RS15155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFI11_RS15165 PF00486 Transcriptional regulatory protein, C terminal CFI11_RS15165 PF00072 Response regulator receiver domain CFI11_RS15170 PF01381 Helix-turn-helix CFI11_RS15170 PF06114 IrrE N-terminal-like domain CFI11_RS15170 PF09856 Predicted transcriptional regulator (DUF2083) CFI11_RS15180 PF02653 Branched-chain amino acid transport system / permease component CFI11_RS15190 PF12399 Branched-chain amino acid ATP-binding cassette transporter CFI11_RS15190 PF00005 ABC transporter CFI11_RS15195 PF00005 ABC transporter CFI11_RS15205 PF13193 AMP-binding enzyme C-terminal domain CFI11_RS15205 PF00501 AMP-binding enzyme CFI11_RS15210 PF00364 Biotin-requiring enzyme CFI11_RS15215 PF02785 Biotin carboxylase C-terminal domain CFI11_RS15215 PF00289 Biotin carboxylase, N-terminal domain CFI11_RS15215 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CFI11_RS15220 PF03588 Leucyl/phenylalanyl-tRNA protein transferase CFI11_RS15245 PF10431 C-terminal, D2-small domain, of ClpB protein CFI11_RS15245 PF06689 ClpX C4-type zinc finger CFI11_RS15245 PF07724 AAA domain (Cdc48 subfamily) CFI11_RS15250 PF00574 Clp protease CFI11_RS15270 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CFI11_RS15285 PF00364 Biotin-requiring enzyme CFI11_RS15285 PF02817 e3 binding domain CFI11_RS15285 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CFI11_RS15290 PF00364 Biotin-requiring enzyme CFI11_RS15290 PF02817 e3 binding domain CFI11_RS15290 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CFI11_RS15295 PF00676 Dehydrogenase E1 component CFI11_RS15300 PF02779 Transketolase, pyrimidine binding domain CFI11_RS15300 PF02780 Transketolase, C-terminal domain CFI11_RS15315 PF00034 Cytochrome c CFI11_RS15320 PF00174 Oxidoreductase molybdopterin binding domain CFI11_RS15325 PF02872 5'-nucleotidase, C-terminal domain CFI11_RS15325 PF00149 Calcineurin-like phosphoesterase CFI11_RS15355 PF02683 Cytochrome C biogenesis protein transmembrane region CFI11_RS15370 PF01022 Bacterial regulatory protein, arsR family CFI11_RS15375 PF04143 Sulphur transport CFI11_RS15385 PF04432 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus CFI11_RS15385 PF04422 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term CFI11_RS15400 PF05853 beta-keto acid cleavage enzyme CFI11_RS15425 PF07690 Major Facilitator Superfamily CFI11_RS15445 PF07943 Penicillin-binding protein 5, C-terminal domain CFI11_RS15445 PF00768 D-alanyl-D-alanine carboxypeptidase CFI11_RS15450 PF02223 Thymidylate kinase CFI11_RS15455 PF09115 DNA polymerase III, delta subunit, C terminal CFI11_RS15460 PF01026 TatD related DNase CFI11_RS15465 PF12706 Beta-lactamase superfamily domain CFI11_RS15480 PF02560 Cyanate lyase C-terminal domain CFI11_RS15490 PF00005 ABC transporter CFI11_RS15495 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS15505 PF01590 GAF domain CFI11_RS15505 PF00158 Sigma-54 interaction domain CFI11_RS15515 PF00005 ABC transporter CFI11_RS15535 PF04545 Sigma-70, region 4 CFI11_RS15535 PF04542 Sigma-70 region 2 CFI11_RS15590 PF00440 Bacterial regulatory proteins, tetR family CFI11_RS15590 PF13977 BetI-type transcriptional repressor, C-terminal CFI11_RS15610 PF02492 CobW/HypB/UreG, nucleotide-binding domain CFI11_RS15610 PF07683 Cobalamin synthesis protein cobW C-terminal domain CFI11_RS15615 PF02492 CobW/HypB/UreG, nucleotide-binding domain CFI11_RS15615 PF07683 Cobalamin synthesis protein cobW C-terminal domain CFI11_RS15630 PF07690 Major Facilitator Superfamily CFI11_RS15655 PF02028 BCCT, betaine/carnitine/choline family transporter CFI11_RS15665 PF00582 Universal stress protein family CFI11_RS15670 PF00873 AcrB/AcrD/AcrF family CFI11_RS15675 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CFI11_RS15685 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CFI11_RS15685 PF00005 ABC transporter CFI11_RS15690 PF00005 ABC transporter CFI11_RS15690 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CFI11_RS15695 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CFI11_RS15700 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS15705 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS15705 PF12911 N-terminal TM domain of oligopeptide transport permease C CFI11_RS15720 PF00392 Bacterial regulatory proteins, gntR family CFI11_RS15720 PF07729 FCD domain CFI11_RS15730 PF07171 MlrC C-terminus CFI11_RS15730 PF07364 Metallopeptidase family M81 CFI11_RS15735 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CFI11_RS15740 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS15745 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS15750 PF00005 ABC transporter CFI11_RS15750 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CFI11_RS15755 PF01546 Peptidase family M20/M25/M40 CFI11_RS15755 PF07687 Peptidase dimerisation domain CFI11_RS15760 PF01546 Peptidase family M20/M25/M40 CFI11_RS15760 PF07687 Peptidase dimerisation domain CFI11_RS15770 PF00132 Bacterial transferase hexapeptide (six repeats) CFI11_RS15770 PF12804 MobA-like NTP transferase domain CFI11_RS15775 PF02625 XdhC and CoxI family CFI11_RS15775 PF13478 XdhC Rossmann domain CFI11_RS15790 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CFI11_RS15790 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CFI11_RS15795 PF00111 2Fe-2S iron-sulfur cluster binding domain CFI11_RS15795 PF01799 [2Fe-2S] binding domain CFI11_RS15800 PF00941 FAD binding domain in molybdopterin dehydrogenase CFI11_RS15800 PF03450 CO dehydrogenase flavoprotein C-terminal domain CFI11_RS15805 PF00563 EAL domain CFI11_RS15805 PF03707 Bacterial signalling protein N terminal repeat CFI11_RS15805 PF13188 PAS domain CFI11_RS15805 PF00990 Diguanylate cyclase, GGDEF domain CFI11_RS15830 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS15835 PF12911 N-terminal TM domain of oligopeptide transport permease C CFI11_RS15835 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS15860 PF00543 Nitrogen regulatory protein P-II CFI11_RS15865 PF00120 Glutamine synthetase, catalytic domain CFI11_RS15865 PF03951 Glutamine synthetase, beta-Grasp domain CFI11_RS15870 PF13406 Transglycosylase SLT domain CFI11_RS15880 PF03527 RHS protein CFI11_RS15880 PF05593 RHS Repeat CFI11_RS15895 PF04717 Type VI secretion system, phage-baseplate injector CFI11_RS15900 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CFI11_RS15905 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CFI11_RS15905 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CFI11_RS15925 PF00557 Metallopeptidase family M24 CFI11_RS15930 PF00905 Penicillin binding protein transpeptidase domain CFI11_RS15935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFI11_RS15935 PF03466 LysR substrate binding domain CFI11_RS15955 PF10397 Adenylosuccinate lyase C-terminus CFI11_RS15955 PF00206 Lyase CFI11_RS15960 PF14842 FliG N-terminal domain CFI11_RS15960 PF01706 FliG C-terminal domain CFI11_RS15960 PF14841 FliG middle domain CFI11_RS15965 PF02092 Glycyl-tRNA synthetase beta subunit CFI11_RS15965 PF05746 DALR anticodon binding domain CFI11_RS15975 PF02091 Glycyl-tRNA synthetase alpha subunit CFI11_RS15985 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CFI11_RS15985 PF00205 Thiamine pyrophosphate enzyme, central domain CFI11_RS15985 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CFI11_RS15990 PF02386 Cation transport protein CFI11_RS16010 PF02649 Type I GTP cyclohydrolase folE2 CFI11_RS16015 PF01053 Cys/Met metabolism PLP-dependent enzyme CFI11_RS16025 PF00043 Glutathione S-transferase, C-terminal domain CFI11_RS16025 PF02798 Glutathione S-transferase, N-terminal domain CFI11_RS16030 PF04279 Intracellular septation protein A CFI11_RS16040 PF00448 SRP54-type protein, GTPase domain CFI11_RS16040 PF02881 SRP54-type protein, helical bundle domain CFI11_RS16045 PF10531 SLBB domain CFI11_RS16045 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CFI11_RS16045 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CFI11_RS16050 PF00487 Fatty acid desaturase CFI11_RS16060 PF13742 OB-fold nucleic acid binding domain CFI11_RS16060 PF02601 Exonuclease VII, large subunit CFI11_RS16065 PF02844 Phosphoribosylglycinamide synthetase, N domain CFI11_RS16065 PF02843 Phosphoribosylglycinamide synthetase, C domain CFI11_RS16065 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CFI11_RS16075 PF00111 2Fe-2S iron-sulfur cluster binding domain CFI11_RS16085 PF13180 PDZ domain CFI11_RS16095 PF01145 SPFH domain / Band 7 family CFI11_RS16100 PF01145 SPFH domain / Band 7 family CFI11_RS16105 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CFI11_RS16105 PF07992 Pyridine nucleotide-disulphide oxidoreductase CFI11_RS16110 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CFI11_RS16120 PF13417 Glutathione S-transferase, N-terminal domain CFI11_RS16125 PF03315 Serine dehydratase beta chain CFI11_RS16125 PF03313 Serine dehydratase alpha chain CFI11_RS16150 PF09278 MerR, DNA binding CFI11_RS16150 PF00376 MerR family regulatory protein CFI11_RS16160 PF00709 Adenylosuccinate synthetase CFI11_RS16165 PF02522 Aminoglycoside 3-N-acetyltransferase CFI11_RS16175 PF08443 RimK-like ATP-grasp domain CFI11_RS16175 PF18030 RimK PreATP-grasp domain CFI11_RS16190 PF02979 Nitrile hydratase, alpha chain CFI11_RS16200 PF06418 CTP synthase N-terminus CFI11_RS16200 PF00117 Glutamine amidotransferase class-I CFI11_RS16205 PF16363 GDP-mannose 4,6 dehydratase CFI11_RS16210 PF01244 Membrane dipeptidase (Peptidase family M19) CFI11_RS16235 PF00005 ABC transporter CFI11_RS16240 PF00497 Bacterial extracellular solute-binding proteins, family 3 CFI11_RS16245 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS16250 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS16255 PF00120 Glutamine synthetase, catalytic domain CFI11_RS16260 PF02540 NAD synthase CFI11_RS16260 PF00958 GMP synthase C terminal domain CFI11_RS16260 PF00117 Glutamine amidotransferase class-I CFI11_RS16265 PF00120 Glutamine synthetase, catalytic domain CFI11_RS16270 PF01266 FAD dependent oxidoreductase CFI11_RS16275 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CFI11_RS16280 PF01063 Amino-transferase class IV CFI11_RS16295 PF00561 alpha/beta hydrolase fold CFI11_RS16295 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus CFI11_RS16350 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CFI11_RS16350 PF03129 Anticodon binding domain CFI11_RS16350 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CFI11_RS16350 PF02824 TGS domain CFI11_RS16360 PF05114 Protein of unknown function (DUF692) CFI11_RS16380 PF03960 ArsC family CFI11_RS16385 PF00313 'Cold-shock' DNA-binding domain CFI11_RS16405 PF00067 Cytochrome P450 CFI11_RS16410 PF02511 Thymidylate synthase complementing protein CFI11_RS16425 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CFI11_RS16435 PF12802 MarR family CFI11_RS16445 PF00717 Peptidase S24-like CFI11_RS16445 PF01381 Helix-turn-helix CFI11_RS16450 PF00155 Aminotransferase class I and II CFI11_RS16460 PF01554 MatE CFI11_RS16465 PF03824 High-affinity nickel-transport protein CFI11_RS16480 PF03796 DnaB-like helicase C terminal domain CFI11_RS16485 PF00561 alpha/beta hydrolase fold CFI11_RS16495 PF01145 SPFH domain / Band 7 family CFI11_RS16495 PF15975 Flotillin CFI11_RS16510 PF00986 DNA gyrase B subunit, carboxyl terminus CFI11_RS16510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFI11_RS16510 PF01751 Toprim domain CFI11_RS16510 PF00204 DNA gyrase B CFI11_RS16545 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP CFI11_RS16545 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CFI11_RS16555 PF02615 Malate/L-lactate dehydrogenase CFI11_RS16560 PF00005 ABC transporter CFI11_RS16565 PF12704 MacB-like periplasmic core domain CFI11_RS16565 PF02687 FtsX-like permease family CFI11_RS16585 PF03129 Anticodon binding domain CFI11_RS16585 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CFI11_RS16590 PF01594 AI-2E family transporter CFI11_RS16600 PF13090 Polyphosphate kinase C-terminal domain 2 CFI11_RS16600 PF02503 Polyphosphate kinase middle domain CFI11_RS16600 PF13089 Polyphosphate kinase N-terminal domain CFI11_RS16600 PF17941 Polyphosphate kinase C-terminal domain 1 CFI11_RS16610 PF02541 Ppx/GppA phosphatase family CFI11_RS16625 PF00226 DnaJ domain CFI11_RS16625 PF05099 Tellurite resistance protein TerB CFI11_RS16640 PF02310 B12 binding domain CFI11_RS16640 PF01642 Methylmalonyl-CoA mutase CFI11_RS16655 PF02785 Biotin carboxylase C-terminal domain CFI11_RS16655 PF18140 Propionyl-coenzyme A carboxylase BT domain CFI11_RS16655 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CFI11_RS16655 PF00364 Biotin-requiring enzyme CFI11_RS16655 PF00289 Biotin carboxylase, N-terminal domain CFI11_RS16690 PF01039 Carboxyl transferase domain CFI11_RS16695 PF07690 Major Facilitator Superfamily CFI11_RS16700 PF09856 Predicted transcriptional regulator (DUF2083) CFI11_RS16700 PF06114 IrrE N-terminal-like domain CFI11_RS16700 PF01381 Helix-turn-helix CFI11_RS16710 PF13378 Enolase C-terminal domain-like CFI11_RS16710 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CFI11_RS16715 PF00732 GMC oxidoreductase CFI11_RS16715 PF05199 GMC oxidoreductase CFI11_RS16720 PF00171 Aldehyde dehydrogenase family CFI11_RS16725 PF00884 Sulfatase CFI11_RS16725 PF12411 Choline sulfatase enzyme C terminal CFI11_RS16730 PF00440 Bacterial regulatory proteins, tetR family CFI11_RS16730 PF13977 BetI-type transcriptional repressor, C-terminal CFI11_RS16735 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CFI11_RS16745 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS16750 PF00571 CBS domain CFI11_RS16750 PF00005 ABC transporter CFI11_RS16755 PF00892 EamA-like transporter family CFI11_RS16760 PF01810 LysE type translocator CFI11_RS16765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFI11_RS16765 PF03466 LysR substrate binding domain CFI11_RS16775 PF01132 Elongation factor P (EF-P) OB domain CFI11_RS16775 PF09285 Elongation factor P, C-terminal CFI11_RS16775 PF08207 Elongation factor P (EF-P) KOW-like domain CFI11_RS16790 PF07685 CobB/CobQ-like glutamine amidotransferase domain CFI11_RS16800 PF02321 Outer membrane efflux protein CFI11_RS16815 PF00005 ABC transporter CFI11_RS16820 PF12399 Branched-chain amino acid ATP-binding cassette transporter CFI11_RS16820 PF00005 ABC transporter CFI11_RS16830 PF02653 Branched-chain amino acid transport system / permease component CFI11_RS16845 PF00743 Flavin-binding monooxygenase-like CFI11_RS16850 PF00144 Beta-lactamase CFI11_RS16855 PF08543 Phosphomethylpyrimidine kinase CFI11_RS16860 PF17392 Urocanase C-terminal domain CFI11_RS16860 PF01175 Urocanase Rossmann-like domain CFI11_RS16860 PF17391 Urocanase N-terminal domain CFI11_RS16870 PF00221 Aromatic amino acid lyase CFI11_RS16875 PF01979 Amidohydrolase family CFI11_RS16880 PF03600 Citrate transporter CFI11_RS16880 PF02080 TrkA-C domain CFI11_RS16890 PF13277 YmdB-like protein CFI11_RS16895 PF01812 5-formyltetrahydrofolate cyclo-ligase family CFI11_RS16900 PF00571 CBS domain CFI11_RS16900 PF03448 MgtE intracellular N domain CFI11_RS16900 PF01769 Divalent cation transporter CFI11_RS16905 PF01979 Amidohydrolase family CFI11_RS16910 PF01979 Amidohydrolase family CFI11_RS16915 PF00459 Inositol monophosphatase family CFI11_RS16920 PF01381 Helix-turn-helix CFI11_RS16925 PF08240 Alcohol dehydrogenase GroES-like domain CFI11_RS16925 PF00698 Acyl transferase domain CFI11_RS16925 PF08990 Erythronolide synthase docking CFI11_RS16925 PF16197 Ketoacyl-synthetase C-terminal extension CFI11_RS16925 PF00109 Beta-ketoacyl synthase, N-terminal domain CFI11_RS16925 PF08659 KR domain CFI11_RS16925 PF00550 Phosphopantetheine attachment site CFI11_RS16925 PF14765 Polyketide synthase dehydratase CFI11_RS16925 PF02801 Beta-ketoacyl synthase, C-terminal domain CFI11_RS16930 PF03466 LysR substrate binding domain CFI11_RS16930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFI11_RS16940 PF01027 Inhibitor of apoptosis-promoting Bax1 CFI11_RS16955 PF00471 Ribosomal protein L33 CFI11_RS16975 PF01510 N-acetylmuramoyl-L-alanine amidase CFI11_RS16985 PF01425 Amidase CFI11_RS16990 PF02686 Glu-tRNAGln amidotransferase C subunit CFI11_RS16995 PF02627 Carboxymuconolactone decarboxylase family CFI11_RS17005 PF12706 Beta-lactamase superfamily domain CFI11_RS17010 PF00391 PEP-utilising enzyme, mobile domain CFI11_RS17010 PF02896 PEP-utilising enzyme, TIM barrel domain CFI11_RS17010 PF05524 PEP-utilising enzyme, N-terminal CFI11_RS17015 PF13840 ACT domain CFI11_RS17015 PF01842 ACT domain CFI11_RS17015 PF00696 Amino acid kinase family CFI11_RS17050 PF00916 Sulfate permease family CFI11_RS17050 PF01740 STAS domain CFI11_RS17055 PF01048 Phosphorylase superfamily CFI11_RS17060 PF01810 LysE type translocator CFI11_RS17065 PF00156 Phosphoribosyl transferase domain CFI11_RS17070 PF02913 FAD linked oxidases, C-terminal domain CFI11_RS17070 PF01565 FAD binding domain CFI11_RS17085 PF05193 Peptidase M16 inactive domain CFI11_RS17085 PF00675 Insulinase (Peptidase family M16) CFI11_RS17090 PF14821 Threonine synthase N terminus CFI11_RS17090 PF00291 Pyridoxal-phosphate dependent enzyme CFI11_RS17095 PF02104 SURF1 family CFI11_RS17100 PF00510 Cytochrome c oxidase subunit III CFI11_RS17105 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 CFI11_RS17110 PF01040 UbiA prenyltransferase family CFI11_RS17115 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CFI11_RS17115 PF02790 Cytochrome C oxidase subunit II, transmembrane domain CFI11_RS17120 PF01523 Putative modulator of DNA gyrase CFI11_RS17130 PF02481 DNA recombination-mediator protein A CFI11_RS17135 PF01751 Toprim domain CFI11_RS17135 PF01131 DNA topoisomerase CFI11_RS17135 PF01396 Topoisomerase DNA binding C4 zinc finger CFI11_RS17135 PF13368 Topoisomerase C-terminal repeat CFI11_RS17140 PF01144 Coenzyme A transferase CFI11_RS17145 PF13581 Histidine kinase-like ATPase domain CFI11_RS17145 PF13426 PAS domain CFI11_RS17145 PF07568 Histidine kinase CFI11_RS17150 PF01144 Coenzyme A transferase CFI11_RS17175 PF00263 Bacterial type II and III secretion system protein CFI11_RS17175 PF13629 Pilus formation protein N terminal region CFI11_RS17175 PF04972 BON domain CFI11_RS17180 PF05736 OprF membrane domain CFI11_RS17180 PF00691 OmpA family CFI11_RS17190 PF00437 Type II/IV secretion system protein CFI11_RS17230 PF00270 DEAD/DEAH box helicase CFI11_RS17230 PF08494 DEAD/H associated CFI11_RS17230 PF00271 Helicase conserved C-terminal domain CFI11_RS17245 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CFI11_RS17245 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CFI11_RS17255 PF01268 Formate--tetrahydrofolate ligase CFI11_RS17265 PF00004 ATPase family associated with various cellular activities (AAA) CFI11_RS17265 PF17862 AAA+ lid domain CFI11_RS17265 PF01434 Peptidase family M41 CFI11_RS17265 PF06480 FtsH Extracellular CFI11_RS17270 PF01171 PP-loop family CFI11_RS17280 PF00691 OmpA family CFI11_RS17285 PF04052 TolB amino-terminal domain CFI11_RS17285 PF07676 WD40-like Beta Propeller Repeat CFI11_RS17295 PF02472 Biopolymer transport protein ExbD/TolR CFI11_RS17300 PF01618 MotA/TolQ/ExbB proton channel family CFI11_RS17305 PF03061 Thioesterase superfamily CFI11_RS17315 PF05496 Holliday junction DNA helicase RuvB P-loop domain CFI11_RS17315 PF05491 RuvB C-terminal winged helix domain CFI11_RS17315 PF17864 RuvB AAA lid domain CFI11_RS17320 PF01330 RuvA N terminal domain CFI11_RS17320 PF07499 RuvA, C-terminal domain CFI11_RS17325 PF02075 Crossover junction endodeoxyribonuclease RuvC CFI11_RS17350 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CFI11_RS17350 PF18074 Primosomal protein N C-terminal domain CFI11_RS17350 PF17764 3′ DNA-binding domain (3′BD) CFI11_RS17350 PF00270 DEAD/DEAH box helicase CFI11_RS17355 PF00923 Transaldolase/Fructose-6-phosphate aldolase CFI11_RS17365 PF02899 Phage integrase, N-terminal SAM-like domain CFI11_RS17365 PF00589 Phage integrase family CFI11_RS17370 PF01066 CDP-alcohol phosphatidyltransferase CFI11_RS17380 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CFI11_RS17380 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CFI11_RS17390 PF08264 Anticodon-binding domain of tRNA CFI11_RS17390 PF00133 tRNA synthetases class I (I, L, M and V) CFI11_RS17395 PF07992 Pyridine nucleotide-disulphide oxidoreductase CFI11_RS17395 PF00085 Thioredoxin CFI11_RS17400 PF05128 Domain of unknown function (DUF697) CFI11_RS17410 PF04317 YcjX-like family, DUF463 CFI11_RS17415 PF01416 tRNA pseudouridine synthase CFI11_RS17435 PF00582 Universal stress protein family CFI11_RS17440 PF02347 Glycine cleavage system P-protein CFI11_RS17445 PF01597 Glycine cleavage H-protein CFI11_RS17450 PF01571 Aminomethyltransferase folate-binding domain CFI11_RS17450 PF08669 Glycine cleavage T-protein C-terminal barrel domain CFI11_RS17455 PF00120 Glutamine synthetase, catalytic domain CFI11_RS17460 PF00355 Rieske [2Fe-2S] domain CFI11_RS17470 PF01042 Endoribonuclease L-PSP CFI11_RS17475 PF00005 ABC transporter CFI11_RS17480 PF00005 ABC transporter CFI11_RS17485 PF11862 Domain of unknown function (DUF3382) CFI11_RS17485 PF02653 Branched-chain amino acid transport system / permease component CFI11_RS17490 PF02653 Branched-chain amino acid transport system / permease component CFI11_RS17500 PF00501 AMP-binding enzyme CFI11_RS17500 PF13193 AMP-binding enzyme C-terminal domain CFI11_RS17505 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CFI11_RS17505 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CFI11_RS17505 PF02770 Acyl-CoA dehydrogenase, middle domain CFI11_RS17510 PF00378 Enoyl-CoA hydratase/isomerase CFI11_RS17520 PF00106 short chain dehydrogenase CFI11_RS17525 PF01494 FAD binding domain CFI11_RS17530 PF08669 Glycine cleavage T-protein C-terminal barrel domain CFI11_RS17530 PF16350 FAD dependent oxidoreductase central domain CFI11_RS17530 PF01571 Aminomethyltransferase folate-binding domain CFI11_RS17530 PF01266 FAD dependent oxidoreductase CFI11_RS17545 PF14791 DNA polymerase beta thumb CFI11_RS17545 PF14716 Helix-hairpin-helix domain CFI11_RS17545 PF02811 PHP domain CFI11_RS17550 PF03109 ABC1 family CFI11_RS17555 PF00111 2Fe-2S iron-sulfur cluster binding domain CFI11_RS17580 PF03060 Nitronate monooxygenase CFI11_RS17585 PF01425 Amidase CFI11_RS17595 PF08448 PAS fold CFI11_RS17595 PF03705 CheR methyltransferase, all-alpha domain CFI11_RS17595 PF01739 CheR methyltransferase, SAM binding domain CFI11_RS17595 PF01339 CheB methylesterase CFI11_RS17610 PF00990 Diguanylate cyclase, GGDEF domain CFI11_RS17610 PF00563 EAL domain CFI11_RS17610 PF03707 Bacterial signalling protein N terminal repeat CFI11_RS17620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFI11_RS17620 PF13426 PAS domain CFI11_RS17620 PF00072 Response regulator receiver domain CFI11_RS17630 PF01964 Radical SAM ThiC family CFI11_RS17630 PF13667 ThiC-associated domain CFI11_RS17635 PF01266 FAD dependent oxidoreductase CFI11_RS17645 PF05690 Thiazole biosynthesis protein ThiG CFI11_RS17650 PF02581 Thiamine monophosphate synthase CFI11_RS17655 PF00899 ThiF family CFI11_RS17660 PF02867 Ribonucleotide reductase, barrel domain CFI11_RS17660 PF03477 ATP cone domain CFI11_RS17660 PF00317 Ribonucleotide reductase, all-alpha domain CFI11_RS17670 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CFI11_RS17670 PF13360 PQQ-like domain CFI11_RS17680 PF00501 AMP-binding enzyme CFI11_RS17685 PF00005 ABC transporter CFI11_RS17700 PF02653 Branched-chain amino acid transport system / permease component CFI11_RS17700 PF11862 Domain of unknown function (DUF3382) CFI11_RS17705 PF12399 Branched-chain amino acid ATP-binding cassette transporter CFI11_RS17705 PF00005 ABC transporter CFI11_RS17710 PF01634 ATP phosphoribosyltransferase CFI11_RS17715 PF13393 Histidyl-tRNA synthetase CFI11_RS17720 PF13393 Histidyl-tRNA synthetase CFI11_RS17720 PF03129 Anticodon binding domain CFI11_RS17725 PF00378 Enoyl-CoA hydratase/isomerase CFI11_RS17740 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CFI11_RS17740 PF07733 Bacterial DNA polymerase III alpha NTPase domain CFI11_RS17740 PF14579 Helix-hairpin-helix motif CFI11_RS17740 PF02811 PHP domain CFI11_RS17745 PF01799 [2Fe-2S] binding domain CFI11_RS17745 PF00111 2Fe-2S iron-sulfur cluster binding domain CFI11_RS17750 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CFI11_RS17750 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CFI11_RS17760 PF00005 ABC transporter CFI11_RS17765 PF02653 Branched-chain amino acid transport system / permease component CFI11_RS17770 PF02653 Branched-chain amino acid transport system / permease component CFI11_RS17775 PF02608 ABC transporter substrate-binding protein PnrA-like CFI11_RS17780 PF00571 CBS domain CFI11_RS17785 PF00248 Aldo/keto reductase family CFI11_RS17790 PF01266 FAD dependent oxidoreductase CFI11_RS17800 PF16350 FAD dependent oxidoreductase central domain CFI11_RS17800 PF01571 Aminomethyltransferase folate-binding domain CFI11_RS17800 PF01266 FAD dependent oxidoreductase CFI11_RS17800 PF08669 Glycine cleavage T-protein C-terminal barrel domain CFI11_RS17805 PF02913 FAD linked oxidases, C-terminal domain CFI11_RS17805 PF01565 FAD binding domain CFI11_RS17815 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CFI11_RS17815 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CFI11_RS17825 PF00561 alpha/beta hydrolase fold CFI11_RS17830 PF08240 Alcohol dehydrogenase GroES-like domain CFI11_RS17830 PF00107 Zinc-binding dehydrogenase CFI11_RS17845 PF13411 MerR HTH family regulatory protein CFI11_RS17860 PF01483 Proprotein convertase P-domain CFI11_RS17860 PF00082 Subtilase family CFI11_RS17865 PF01223 DNA/RNA non-specific endonuclease CFI11_RS17870 PF12833 Helix-turn-helix domain CFI11_RS17870 PF02311 AraC-like ligand binding domain CFI11_RS17875 PF00144 Beta-lactamase CFI11_RS17880 PF17912 MalK OB fold domain CFI11_RS17880 PF00005 ABC transporter CFI11_RS17885 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS17890 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS17895 PF13416 Bacterial extracellular solute-binding protein CFI11_RS17900 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS17905 PF00005 ABC transporter CFI11_RS17915 PF01266 FAD dependent oxidoreductase CFI11_RS17920 PF00202 Aminotransferase class-III CFI11_RS17925 PF00155 Aminotransferase class I and II CFI11_RS17925 PF00392 Bacterial regulatory proteins, gntR family CFI11_RS17930 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CFI11_RS17930 PF00205 Thiamine pyrophosphate enzyme, central domain CFI11_RS17930 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CFI11_RS17935 PF00871 Acetokinase family CFI11_RS17940 PF03601 Conserved hypothetical protein 698 CFI11_RS17945 PF01568 Molydopterin dinucleotide binding domain CFI11_RS17945 PF00384 Molybdopterin oxidoreductase CFI11_RS17945 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CFI11_RS17955 PF12800 4Fe-4S binding domain CFI11_RS17955 PF13247 4Fe-4S dicluster domain CFI11_RS17965 PF00701 Dihydrodipicolinate synthetase family CFI11_RS17970 PF01464 Transglycosylase SLT domain CFI11_RS17970 PF14718 Soluble lytic murein transglycosylase L domain CFI11_RS17980 PF01266 FAD dependent oxidoreductase CFI11_RS17980 PF05430 S-adenosyl-L-methionine-dependent methyltransferase CFI11_RS17995 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CFI11_RS18005 PF13488 Glycine zipper CFI11_RS18005 PF00691 OmpA family CFI11_RS18015 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CFI11_RS18015 PF12833 Helix-turn-helix domain CFI11_RS18015 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CFI11_RS18015 PF02805 Metal binding domain of Ada CFI11_RS18020 PF00633 Helix-hairpin-helix motif CFI11_RS18020 PF00730 HhH-GPD superfamily base excision DNA repair protein CFI11_RS18020 PF10576 Iron-sulfur binding domain of endonuclease III CFI11_RS18025 PF00294 pfkB family carbohydrate kinase CFI11_RS18035 PF00293 NUDIX domain CFI11_RS18040 PF07992 Pyridine nucleotide-disulphide oxidoreductase CFI11_RS18040 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CFI11_RS18065 PF01544 CorA-like Mg2+ transporter protein CFI11_RS18075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFI11_RS18075 PF03466 LysR substrate binding domain CFI11_RS18080 PF00691 OmpA family CFI11_RS18080 PF05736 OprF membrane domain CFI11_RS18095 PF00994 Probable molybdopterin binding domain CFI11_RS18095 PF18146 Damage-inducible protein CinA KH domain CFI11_RS18095 PF02464 Competence-damaged protein CFI11_RS18100 PF17746 SfsA N-terminal OB domain CFI11_RS18100 PF03749 Sugar fermentation stimulation protein RE domain CFI11_RS18105 PF00557 Metallopeptidase family M24 CFI11_RS18120 PF07992 Pyridine nucleotide-disulphide oxidoreductase CFI11_RS18120 PF14759 Reductase C-terminal CFI11_RS18125 PF08534 Redoxin CFI11_RS18130 PF13426 PAS domain CFI11_RS18130 PF13581 Histidine kinase-like ATPase domain CFI11_RS18130 PF07568 Histidine kinase CFI11_RS18135 PF01329 Pterin 4 alpha carbinolamine dehydratase CFI11_RS18155 PF00529 HlyD membrane-fusion protein of T1SS CFI11_RS18155 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CFI11_RS18160 PF00005 ABC transporter CFI11_RS18160 PF00664 ABC transporter transmembrane region CFI11_RS18165 PF04333 MlaA lipoprotein CFI11_RS18175 PF00912 Transglycosylase CFI11_RS18175 PF17092 Penicillin-binding protein OB-like domain CFI11_RS18175 PF00905 Penicillin binding protein transpeptidase domain CFI11_RS18180 PF00543 Nitrogen regulatory protein P-II CFI11_RS18185 PF00909 Ammonium Transporter Family CFI11_RS18190 PF00155 Aminotransferase class I and II CFI11_RS18195 PF00581 Rhodanese-like domain CFI11_RS18205 PF01668 SmpB protein CFI11_RS18230 PF07509 Protein of unknown function (DUF1523) CFI11_RS18270 PF00557 Metallopeptidase family M24 CFI11_RS18270 PF01321 Creatinase/Prolidase N-terminal domain CFI11_RS18280 PF00171 Aldehyde dehydrogenase family CFI11_RS18290 PF00011 Hsp20/alpha crystallin family CFI11_RS18295 PF00089 Trypsin CFI11_RS18300 PF02754 Cysteine-rich domain CFI11_RS18300 PF13183 4Fe-4S dicluster domain CFI11_RS18310 PF01565 FAD binding domain CFI11_RS18315 PF01565 FAD binding domain CFI11_RS18315 PF02913 FAD linked oxidases, C-terminal domain CFI11_RS18325 PF02590 Predicted SPOUT methyltransferase CFI11_RS18340 PF12795 Mechanosensitive ion channel porin domain CFI11_RS18340 PF00924 Mechanosensitive ion channel CFI11_RS18340 PF12794 Mechanosensitive ion channel inner membrane domain 1 CFI11_RS18365 PF00330 Aconitase family (aconitate hydratase) CFI11_RS18370 PF00694 Aconitase C-terminal domain CFI11_RS18395 PF00180 Isocitrate/isopropylmalate dehydrogenase CFI11_RS18415 PF02470 MlaD protein CFI11_RS18420 PF04403 Paraquat-inducible protein A CFI11_RS18435 PF00392 Bacterial regulatory proteins, gntR family CFI11_RS18435 PF07702 UTRA domain CFI11_RS18440 PF03480 Bacterial extracellular solute-binding protein, family 7 CFI11_RS18450 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CFI11_RS18455 PF03884 DNA gyrase inhibitor YacG CFI11_RS18460 PF10150 Ribonuclease E/G family CFI11_RS18465 PF02545 Maf-like protein CFI11_RS18470 PF01176 Translation initiation factor 1A / IF-1 CFI11_RS18475 PF00795 Carbon-nitrogen hydrolase CFI11_RS18500 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CFI11_RS18510 PF00583 Acetyltransferase (GNAT) family CFI11_RS18515 PF00815 Histidinol dehydrogenase CFI11_RS18520 PF06793 Uncharacterised protein family (UPF0262) CFI11_RS18540 PF02082 Transcriptional regulator CFI11_RS18545 PF02627 Carboxymuconolactone decarboxylase family CFI11_RS18570 PF08281 Sigma-70, region 4 CFI11_RS18570 PF04542 Sigma-70 region 2 CFI11_RS18575 PF05922 Peptidase inhibitor I9 CFI11_RS18575 PF00082 Subtilase family CFI11_RS18580 PF11339 Protein of unknown function (DUF3141) CFI11_RS18595 PF00072 Response regulator receiver domain CFI11_RS18595 PF00211 Adenylate and Guanylate cyclase catalytic domain CFI11_RS18600 PF09339 IclR helix-turn-helix domain CFI11_RS18600 PF01614 Bacterial transcriptional regulator CFI11_RS18605 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CFI11_RS18620 PF05199 GMC oxidoreductase CFI11_RS18620 PF00732 GMC oxidoreductase CFI11_RS18625 PF00892 EamA-like transporter family CFI11_RS18645 PF00694 Aconitase C-terminal domain CFI11_RS18645 PF00330 Aconitase family (aconitate hydratase) CFI11_RS18655 PF08534 Redoxin CFI11_RS18665 PF01578 Cytochrome C assembly protein CFI11_RS18670 PF03379 CcmB protein CFI11_RS18675 PF00005 ABC transporter CFI11_RS18680 PF04430 Protein of unknown function (DUF498/DUF598) CFI11_RS18685 PF02355 Protein export membrane protein CFI11_RS18685 PF07549 SecD/SecF GG Motif CFI11_RS18690 PF02355 Protein export membrane protein CFI11_RS18695 PF02699 Preprotein translocase subunit CFI11_RS18705 PF02403 Seryl-tRNA synthetase N-terminal domain CFI11_RS18705 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CFI11_RS18720 PF00487 Fatty acid desaturase CFI11_RS18725 PF01926 50S ribosome-binding GTPase CFI11_RS18725 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CFI11_RS18730 PF13360 PQQ-like domain CFI11_RS18745 PF00873 AcrB/AcrD/AcrF family CFI11_RS18750 PF00005 ABC transporter CFI11_RS18750 PF00664 ABC transporter transmembrane region CFI11_RS18760 PF03641 Possible lysine decarboxylase CFI11_RS18765 PF00892 EamA-like transporter family CFI11_RS18770 PF01965 DJ-1/PfpI family CFI11_RS18775 PF00149 Calcineurin-like phosphoesterase CFI11_RS18780 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CFI11_RS18780 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CFI11_RS18795 PF17806 Sarcosine oxidase A3 domain CFI11_RS18795 PF01571 Aminomethyltransferase folate-binding domain CFI11_RS18795 PF07992 Pyridine nucleotide-disulphide oxidoreductase CFI11_RS18795 PF08669 Glycine cleavage T-protein C-terminal barrel domain CFI11_RS18820 PF01266 FAD dependent oxidoreductase CFI11_RS18830 PF03652 Holliday junction resolvase CFI11_RS18845 PF01925 Sulfite exporter TauE/SafE CFI11_RS18850 PF01207 Dihydrouridine synthase (Dus) CFI11_RS18880 PF00072 Response regulator receiver domain CFI11_RS18880 PF00486 Transcriptional regulatory protein, C terminal CFI11_RS18885 PF01738 Dienelactone hydrolase family CFI11_RS18890 PF01292 Prokaryotic cytochrome b561 CFI11_RS18935 PF01435 Peptidase family M48 CFI11_RS18950 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CFI11_RS18950 PF07992 Pyridine nucleotide-disulphide oxidoreductase CFI11_RS18960 PF00512 His Kinase A (phospho-acceptor) domain CFI11_RS18960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFI11_RS18960 PF02743 Cache domain CFI11_RS18965 PF00158 Sigma-54 interaction domain CFI11_RS18965 PF00072 Response regulator receiver domain CFI11_RS18965 PF02954 Bacterial regulatory protein, Fis family CFI11_RS19005 PF03631 Virulence factor BrkB CFI11_RS19055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFI11_RS19055 PF03466 LysR substrate binding domain CFI11_RS19065 PF01965 DJ-1/PfpI family CFI11_RS19065 PF12833 Helix-turn-helix domain CFI11_RS19075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFI11_RS19075 PF03466 LysR substrate binding domain CFI11_RS19085 PF00171 Aldehyde dehydrogenase family CFI11_RS19090 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CFI11_RS19090 PF00355 Rieske [2Fe-2S] domain CFI11_RS19095 PF07859 alpha/beta hydrolase fold CFI11_RS19100 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS19105 PF00005 ABC transporter CFI11_RS19105 PF00571 CBS domain CFI11_RS19115 PF13977 BetI-type transcriptional repressor, C-terminal CFI11_RS19115 PF00440 Bacterial regulatory proteins, tetR family CFI11_RS19125 PF02899 Phage integrase, N-terminal SAM-like domain CFI11_RS19125 PF00589 Phage integrase family CFI11_RS19135 PF00692 dUTPase CFI11_RS19195 PF04079 Segregation and condensation complex subunit ScpB CFI11_RS19225 PF01810 LysE type translocator CFI11_RS19235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFI11_RS19235 PF03466 LysR substrate binding domain CFI11_RS19255 PF12823 Domain of unknown function (DUF3817) CFI11_RS19265 PF13847 Methyltransferase domain CFI11_RS19270 PF07690 Major Facilitator Superfamily CFI11_RS19275 PF02082 Transcriptional regulator CFI11_RS19295 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CFI11_RS19300 PF00682 HMGL-like CFI11_RS19300 PF07836 DmpG-like communication domain CFI11_RS19305 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation CFI11_RS19305 PF01118 Semialdehyde dehydrogenase, NAD binding domain CFI11_RS19310 PF01557 Fumarylacetoacetate (FAA) hydrolase family CFI11_RS19315 PF00111 2Fe-2S iron-sulfur cluster binding domain CFI11_RS19320 PF12697 Alpha/beta hydrolase family CFI11_RS19325 PF11723 Homotrimeric ring hydroxylase CFI11_RS19325 PF00355 Rieske [2Fe-2S] domain CFI11_RS19335 PF00440 Bacterial regulatory proteins, tetR family CFI11_RS19335 PF08361 MAATS-type transcriptional repressor, C-terminal region CFI11_RS19340 PF00175 Oxidoreductase NAD-binding domain CFI11_RS19340 PF00111 2Fe-2S iron-sulfur cluster binding domain CFI11_RS19350 PF02872 5'-nucleotidase, C-terminal domain CFI11_RS19350 PF00149 Calcineurin-like phosphoesterase CFI11_RS19365 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CFI11_RS19365 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CFI11_RS19370 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CFI11_RS19370 PF00205 Thiamine pyrophosphate enzyme, central domain CFI11_RS19395 PF01554 MatE CFI11_RS19400 PF02080 TrkA-C domain CFI11_RS19400 PF02254 TrkA-N domain CFI11_RS19405 PF02386 Cation transport protein CFI11_RS19410 PF00924 Mechanosensitive ion channel CFI11_RS19440 PF00893 Small Multidrug Resistance protein CFI11_RS19445 PF10431 C-terminal, D2-small domain, of ClpB protein CFI11_RS19445 PF06689 ClpX C4-type zinc finger CFI11_RS19445 PF07724 AAA domain (Cdc48 subfamily) CFI11_RS19470 PF00771 FHIPEP family CFI11_RS19510 PF03958 Bacterial type II/III secretion system short domain CFI11_RS19510 PF00263 Bacterial type II and III secretion system protein CFI11_RS19515 PF01312 FlhB HrpN YscU SpaS Family CFI11_RS19525 PF01313 Bacterial export proteins, family 3 CFI11_RS19530 PF00813 FliP family CFI11_RS19535 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CFI11_RS19545 PF02874 ATP synthase alpha/beta family, beta-barrel domain CFI11_RS19545 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CFI11_RS19545 PF18269 T3SS EscN ATPase C-terminal domain CFI11_RS19560 PF01514 Secretory protein of YscJ/FliF family CFI11_RS19580 PF00486 Transcriptional regulatory protein, C terminal CFI11_RS19580 PF00072 Response regulator receiver domain CFI11_RS19585 PF00512 His Kinase A (phospho-acceptor) domain CFI11_RS19585 PF07689 KaiB domain CFI11_RS19585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFI11_RS19590 PF02311 AraC-like ligand binding domain CFI11_RS19590 PF12833 Helix-turn-helix domain CFI11_RS19600 PF07690 Major Facilitator Superfamily CFI11_RS19605 PF07690 Major Facilitator Superfamily CFI11_RS19610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFI11_RS19610 PF03466 LysR substrate binding domain CFI11_RS19650 PF05762 VWA domain containing CoxE-like protein CFI11_RS19660 PF07728 AAA domain (dynein-related subfamily) CFI11_RS19665 PF13569 Domain of unknown function (DUF4132) CFI11_RS19675 PF00258 Flavodoxin CFI11_RS19680 PF07992 Pyridine nucleotide-disulphide oxidoreductase CFI11_RS19685 PF00171 Aldehyde dehydrogenase family CFI11_RS19690 PF01958 Domain of unknown function DUF108 CFI11_RS19690 PF03447 Homoserine dehydrogenase, NAD binding domain CFI11_RS19695 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CFI11_RS19695 PF00205 Thiamine pyrophosphate enzyme, central domain CFI11_RS19695 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CFI11_RS19710 PF00561 alpha/beta hydrolase fold CFI11_RS19720 PF00355 Rieske [2Fe-2S] domain CFI11_RS19725 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS19735 PF00005 ABC transporter CFI11_RS19750 PF09339 IclR helix-turn-helix domain CFI11_RS19750 PF01614 Bacterial transcriptional regulator CFI11_RS19755 PF01970 Tripartite tricarboxylate transporter TctA family CFI11_RS19775 PF02558 Ketopantoate reductase PanE/ApbA CFI11_RS19775 PF08546 Ketopantoate reductase PanE/ApbA C terminal CFI11_RS19780 PF00501 AMP-binding enzyme CFI11_RS19780 PF13193 AMP-binding enzyme C-terminal domain CFI11_RS19800 PF05384 Sensor protein DegS CFI11_RS19800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFI11_RS19800 PF07730 Histidine kinase CFI11_RS19805 PF00196 Bacterial regulatory proteins, luxR family CFI11_RS19805 PF00072 Response regulator receiver domain CFI11_RS19825 PF00512 His Kinase A (phospho-acceptor) domain CFI11_RS19825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFI11_RS19825 PF08521 Two-component sensor kinase N-terminal CFI11_RS19830 PF00072 Response regulator receiver domain CFI11_RS19830 PF00486 Transcriptional regulatory protein, C terminal CFI11_RS19845 PF00593 TonB dependent receptor CFI11_RS19845 PF07715 TonB-dependent Receptor Plug Domain CFI11_RS19850 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) CFI11_RS19860 PF04183 IucA / IucC family CFI11_RS19860 PF06276 Ferric iron reductase FhuF-like transporter CFI11_RS19870 PF04183 IucA / IucC family CFI11_RS19870 PF06276 Ferric iron reductase FhuF-like transporter CFI11_RS19880 PF01042 Endoribonuclease L-PSP CFI11_RS19890 PF00171 Aldehyde dehydrogenase family CFI11_RS19895 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CFI11_RS19900 PF00392 Bacterial regulatory proteins, gntR family CFI11_RS19900 PF07729 FCD domain CFI11_RS19905 PF00701 Dihydrodipicolinate synthetase family CFI11_RS19910 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CFI11_RS19910 PF13378 Enolase C-terminal domain-like CFI11_RS19915 PF01970 Tripartite tricarboxylate transporter TctA family CFI11_RS19930 PF07995 Glucose / Sorbosone dehydrogenase CFI11_RS19935 PF13545 Crp-like helix-turn-helix domain CFI11_RS19935 PF00027 Cyclic nucleotide-binding domain CFI11_RS19940 PF04055 Radical SAM superfamily CFI11_RS19945 PF00005 ABC transporter CFI11_RS19945 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CFI11_RS19950 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS19950 PF12911 N-terminal TM domain of oligopeptide transport permease C CFI11_RS19955 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS19960 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CFI11_RS19965 PF00034 Cytochrome c CFI11_RS19970 PF00800 Prephenate dehydratase CFI11_RS19970 PF01817 Chorismate mutase type II CFI11_RS19970 PF01842 ACT domain CFI11_RS19980 PF00293 NUDIX domain CFI11_RS19980 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain CFI11_RS19980 PF09297 NADH pyrophosphatase zinc ribbon domain CFI11_RS19985 PF00149 Calcineurin-like phosphoesterase CFI11_RS19985 PF02872 5'-nucleotidase, C-terminal domain CFI11_RS19995 PF00561 alpha/beta hydrolase fold CFI11_RS20005 PF00440 Bacterial regulatory proteins, tetR family CFI11_RS20015 PF12169 DNA polymerase III subunits gamma and tau domain III CFI11_RS20015 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding CFI11_RS20015 PF12170 DNA polymerase III tau subunit V interacting with alpha CFI11_RS20025 PF02575 YbaB/EbfC DNA-binding family CFI11_RS20035 PF02132 RecR protein CFI11_RS20035 PF13662 Toprim domain CFI11_RS20045 PF00857 Isochorismatase family CFI11_RS20050 PF03466 LysR substrate binding domain CFI11_RS20050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFI11_RS20060 PF00445 Ribonuclease T2 family CFI11_RS20065 PF04116 Fatty acid hydroxylase superfamily CFI11_RS20075 PF08240 Alcohol dehydrogenase GroES-like domain CFI11_RS20075 PF00107 Zinc-binding dehydrogenase CFI11_RS20085 PF00107 Zinc-binding dehydrogenase CFI11_RS20085 PF08240 Alcohol dehydrogenase GroES-like domain CFI11_RS20100 PF01165 Ribosomal protein S21 CFI11_RS20105 PF01425 Amidase CFI11_RS20110 PF02311 AraC-like ligand binding domain CFI11_RS20110 PF12833 Helix-turn-helix domain CFI11_RS20120 PF01037 Lrp/AsnC ligand binding domain CFI11_RS20125 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CFI11_RS20125 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CFI11_RS20130 PF01741 Large-conductance mechanosensitive channel, MscL CFI11_RS20135 PF02798 Glutathione S-transferase, N-terminal domain CFI11_RS20135 PF00043 Glutathione S-transferase, C-terminal domain CFI11_RS20140 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ CFI11_RS20145 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CFI11_RS20145 PF03147 Ferredoxin-fold anticodon binding domain CFI11_RS20145 PF03484 tRNA synthetase B5 domain CFI11_RS20145 PF03483 B3/4 domain CFI11_RS20145 PF01588 Putative tRNA binding domain CFI11_RS20165 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CFI11_RS20165 PF01409 tRNA synthetases class II core domain (F) CFI11_RS20175 PF00144 Beta-lactamase CFI11_RS20185 PF03454 MoeA C-terminal region (domain IV) CFI11_RS20185 PF03453 MoeA N-terminal region (domain I and II) CFI11_RS20185 PF00994 Probable molybdopterin binding domain CFI11_RS20195 PF03205 Molybdopterin guanine dinucleotide synthesis protein B CFI11_RS20200 PF12804 MobA-like NTP transferase domain CFI11_RS20205 PF02634 FdhD/NarQ family CFI11_RS20240 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CFI11_RS20240 PF12806 Acetyl-CoA dehydrogenase C-terminal like CFI11_RS20240 PF02770 Acyl-CoA dehydrogenase, middle domain CFI11_RS20240 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CFI11_RS20245 PF01300 Telomere recombination CFI11_RS20245 PF03481 Putative GTP-binding controlling metal-binding CFI11_RS20250 PF02622 Uncharacterized ACR, COG1678 CFI11_RS20265 PF00873 AcrB/AcrD/AcrF family CFI11_RS20275 PF00994 Probable molybdopterin binding domain CFI11_RS20280 PF01810 LysE type translocator CFI11_RS20285 PF03167 Uracil DNA glycosylase superfamily CFI11_RS20290 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CFI11_RS20290 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CFI11_RS20305 PF01979 Amidohydrolase family CFI11_RS20310 PF02660 Glycerol-3-phosphate acyltransferase CFI11_RS20315 PF00326 Prolyl oligopeptidase family CFI11_RS20315 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain CFI11_RS20350 PF04452 RNA methyltransferase CFI11_RS20355 PF01040 UbiA prenyltransferase family CFI11_RS20370 PF02391 MoaE protein CFI11_RS20380 PF01066 CDP-alcohol phosphatidyltransferase CFI11_RS20385 PF08459 UvrC Helix-hairpin-helix N-terminal CFI11_RS20385 PF02151 UvrB/uvrC motif CFI11_RS20385 PF01541 GIY-YIG catalytic domain CFI11_RS20385 PF12826 Helix-hairpin-helix motif CFI11_RS20395 PF01699 Sodium/calcium exchanger protein CFI11_RS20400 PF06965 Na+/H+ antiporter 1 CFI11_RS20400 PF01343 Peptidase family S49 CFI11_RS20405 PF01061 ABC-2 type transporter CFI11_RS20410 PF00005 ABC transporter CFI11_RS20415 PF00892 EamA-like transporter family CFI11_RS20420 PF00378 Enoyl-CoA hydratase/isomerase CFI11_RS20435 PF02311 AraC-like ligand binding domain CFI11_RS20435 PF12833 Helix-turn-helix domain CFI11_RS20440 PF00144 Beta-lactamase CFI11_RS20450 PF01432 Peptidase family M3 CFI11_RS20455 PF00899 ThiF family CFI11_RS20460 PF00692 dUTPase CFI11_RS20465 PF04127 DNA / pantothenate metabolism flavoprotein CFI11_RS20465 PF02441 Flavoprotein CFI11_RS20475 PF00140 Sigma-70 factor, region 1.2 CFI11_RS20475 PF04545 Sigma-70, region 4 CFI11_RS20475 PF04542 Sigma-70 region 2 CFI11_RS20480 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase CFI11_RS20495 PF01078 Magnesium chelatase, subunit ChlI CFI11_RS20495 PF13335 Magnesium chelatase, subunit ChlI C-terminal CFI11_RS20500 PF07859 alpha/beta hydrolase fold CFI11_RS20505 PF02951 Prokaryotic glutathione synthetase, N-terminal domain CFI11_RS20505 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain CFI11_RS20510 PF02021 Uncharacterised protein family UPF0102 CFI11_RS20515 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CFI11_RS20525 PF08335 GlnD PII-uridylyltransferase CFI11_RS20525 PF01966 HD domain CFI11_RS20530 PF03023 Lipid II flippase MurJ CFI11_RS20540 PF00579 tRNA synthetases class I (W and Y) CFI11_RS20545 PF01063 Amino-transferase class IV CFI11_RS20570 PF00750 tRNA synthetases class I (R) CFI11_RS20570 PF05746 DALR anticodon binding domain CFI11_RS20570 PF03485 Arginyl tRNA synthetase N terminal domain CFI11_RS20575 PF01106 NifU-like domain CFI11_RS20590 PF02608 ABC transporter substrate-binding protein PnrA-like CFI11_RS20595 PF00005 ABC transporter CFI11_RS20600 PF02653 Branched-chain amino acid transport system / permease component CFI11_RS20605 PF02653 Branched-chain amino acid transport system / permease component CFI11_RS20610 PF01925 Sulfite exporter TauE/SafE CFI11_RS20620 PF14490 Helix-hairpin-helix containing domain CFI11_RS20620 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain CFI11_RS20620 PF13538 UvrD-like helicase C-terminal domain CFI11_RS20625 PF00765 Autoinducer synthase CFI11_RS20630 PF00196 Bacterial regulatory proteins, luxR family CFI11_RS20630 PF03472 Autoinducer binding domain CFI11_RS20640 PF08240 Alcohol dehydrogenase GroES-like domain CFI11_RS20640 PF00107 Zinc-binding dehydrogenase CFI11_RS20645 PF01553 Acyltransferase CFI11_RS20650 PF01642 Methylmalonyl-CoA mutase CFI11_RS20650 PF02310 B12 binding domain CFI11_RS20655 PF00816 H-NS histone family CFI11_RS20660 PF01048 Phosphorylase superfamily CFI11_RS20680 PF13085 2Fe-2S iron-sulfur cluster binding domain CFI11_RS20680 PF13237 4Fe-4S dicluster domain CFI11_RS20700 PF00890 FAD binding domain CFI11_RS20700 PF02910 Fumarate reductase flavoprotein C-term CFI11_RS20710 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CFI11_RS20715 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CFI11_RS20715 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component CFI11_RS20725 PF03480 Bacterial extracellular solute-binding protein, family 7 CFI11_RS20730 PF00266 Aminotransferase class-V CFI11_RS20735 PF13183 4Fe-4S dicluster domain CFI11_RS20735 PF01565 FAD binding domain CFI11_RS20735 PF02913 FAD linked oxidases, C-terminal domain CFI11_RS20740 PF07729 FCD domain CFI11_RS20740 PF00392 Bacterial regulatory proteins, gntR family CFI11_RS20775 PF04717 Type VI secretion system, phage-baseplate injector CFI11_RS20790 PF01032 FecCD transport family CFI11_RS20795 PF00005 ABC transporter CFI11_RS20800 PF00440 Bacterial regulatory proteins, tetR family CFI11_RS20805 PF13533 Biotin-lipoyl like CFI11_RS20815 PF02798 Glutathione S-transferase, N-terminal domain CFI11_RS20815 PF14497 Glutathione S-transferase, C-terminal domain CFI11_RS20825 PF01494 FAD binding domain CFI11_RS20835 PF00753 Metallo-beta-lactamase superfamily CFI11_RS20845 PF01557 Fumarylacetoacetate (FAA) hydrolase family CFI11_RS20850 PF04209 homogentisate 1,2-dioxygenase CFI11_RS20865 PF00282 Pyridoxal-dependent decarboxylase conserved domain CFI11_RS20875 PF03328 HpcH/HpaI aldolase/citrate lyase family CFI11_RS20880 PF00378 Enoyl-CoA hydratase/isomerase CFI11_RS20890 PF00111 2Fe-2S iron-sulfur cluster binding domain CFI11_RS20890 PF01799 [2Fe-2S] binding domain CFI11_RS20895 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CFI11_RS20915 PF02540 NAD synthase CFI11_RS20915 PF00958 GMP synthase C terminal domain CFI11_RS20915 PF00117 Glutamine amidotransferase class-I CFI11_RS20920 PF02668 Taurine catabolism dioxygenase TauD, TfdA family CFI11_RS20925 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CFI11_RS20940 PF01047 MarR family CFI11_RS20945 PF03480 Bacterial extracellular solute-binding protein, family 7 CFI11_RS20955 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CFI11_RS20970 PF00034 Cytochrome c CFI11_RS20975 PF08281 Sigma-70, region 4 CFI11_RS20975 PF04542 Sigma-70 region 2 CFI11_RS21010 PF01794 Ferric reductase like transmembrane component CFI11_RS21015 PF00174 Oxidoreductase molybdopterin binding domain CFI11_RS21020 PF01645 Conserved region in glutamate synthase CFI11_RS21030 PF02469 Fasciclin domain CFI11_RS21035 PF02469 Fasciclin domain CFI11_RS21045 PF17871 AAA lid domain CFI11_RS21045 PF07724 AAA domain (Cdc48 subfamily) CFI11_RS21045 PF10431 C-terminal, D2-small domain, of ClpB protein CFI11_RS21045 PF02861 Clp amino terminal domain, pathogenicity island component CFI11_RS21045 PF00004 ATPase family associated with various cellular activities (AAA) CFI11_RS21055 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CFI11_RS21080 PF00512 His Kinase A (phospho-acceptor) domain CFI11_RS21080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFI11_RS21085 PF00072 Response regulator receiver domain CFI11_RS21085 PF00486 Transcriptional regulatory protein, C terminal CFI11_RS21095 PF01546 Peptidase family M20/M25/M40 CFI11_RS21100 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CFI11_RS21100 PF01568 Molydopterin dinucleotide binding domain CFI11_RS21100 PF12838 4Fe-4S dicluster domain CFI11_RS21100 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CFI11_RS21100 PF00384 Molybdopterin oxidoreductase CFI11_RS21110 PF14497 Glutathione S-transferase, C-terminal domain CFI11_RS21110 PF02798 Glutathione S-transferase, N-terminal domain CFI11_RS21145 PF01593 Flavin containing amine oxidoreductase CFI11_RS21150 PF04542 Sigma-70 region 2 CFI11_RS21150 PF04545 Sigma-70, region 4 CFI11_RS21155 PF12973 ChrR Cupin-like domain CFI11_RS21160 PF00211 Adenylate and Guanylate cyclase catalytic domain CFI11_RS21170 PF02646 RmuC family CFI11_RS21175 PF01119 DNA mismatch repair protein, C-terminal domain CFI11_RS21175 PF08676 MutL C terminal dimerisation domain CFI11_RS21185 PF02322 Cytochrome bd terminal oxidase subunit II CFI11_RS21190 PF01654 Cytochrome bd terminal oxidase subunit I CFI11_RS21200 PF00202 Aminotransferase class-III CFI11_RS21205 PF00860 Permease family CFI11_RS21210 PF04115 Ureidoglycolate lyase CFI11_RS21215 PF05899 Protein of unknown function (DUF861) CFI11_RS21215 PF07883 Cupin domain CFI11_RS21225 PF00576 HIUase/Transthyretin family CFI11_RS21230 PF00950 ABC 3 transport family CFI11_RS21235 PF00950 ABC 3 transport family CFI11_RS21240 PF00005 ABC transporter CFI11_RS21245 PF01297 Zinc-uptake complex component A periplasmic CFI11_RS21250 PF01791 DeoC/LacD family aldolase CFI11_RS21255 PF00171 Aldehyde dehydrogenase family CFI11_RS21265 PF05193 Peptidase M16 inactive domain CFI11_RS21270 PF05193 Peptidase M16 inactive domain CFI11_RS21270 PF00675 Insulinase (Peptidase family M16) CFI11_RS21280 PF01252 Signal peptidase (SPase) II CFI11_RS21285 PF02142 MGS-like domain CFI11_RS21285 PF01808 AICARFT/IMPCHase bienzyme CFI11_RS21295 PF01189 16S rRNA methyltransferase RsmB/F CFI11_RS21295 PF01029 NusB family CFI11_RS21310 PF01113 Dihydrodipicolinate reductase, N-terminus CFI11_RS21310 PF05173 Dihydrodipicolinate reductase, C-terminus CFI11_RS21315 PF02033 Ribosome-binding factor A CFI11_RS21320 PF09992 Phosphodiester glycosidase CFI11_RS21325 PF01509 TruB family pseudouridylate synthase (N terminal domain) CFI11_RS21325 PF16198 tRNA pseudouridylate synthase B C-terminal domain CFI11_RS21340 PF00312 Ribosomal protein S15 CFI11_RS21345 PF00326 Prolyl oligopeptidase family CFI11_RS21350 PF01138 3' exoribonuclease family, domain 1 CFI11_RS21350 PF00575 S1 RNA binding domain CFI11_RS21350 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CFI11_RS21350 PF00013 KH domain CFI11_RS21350 PF03725 3' exoribonuclease family, domain 2 CFI11_RS21360 PF00578 AhpC/TSA family CFI11_RS21360 PF10417 C-terminal domain of 1-Cys peroxiredoxin CFI11_RS21365 PF00171 Aldehyde dehydrogenase family CFI11_RS21370 PF01531 Glycosyl transferase family 11 CFI11_RS21375 PF00849 RNA pseudouridylate synthase CFI11_RS21385 PF01571 Aminomethyltransferase folate-binding domain CFI11_RS21385 PF16350 FAD dependent oxidoreductase central domain CFI11_RS21385 PF08669 Glycine cleavage T-protein C-terminal barrel domain CFI11_RS21385 PF01266 FAD dependent oxidoreductase CFI11_RS21395 PF01266 FAD dependent oxidoreductase CFI11_RS21395 PF16350 FAD dependent oxidoreductase central domain CFI11_RS21395 PF08669 Glycine cleavage T-protein C-terminal barrel domain CFI11_RS21395 PF01571 Aminomethyltransferase folate-binding domain CFI11_RS21405 PF01810 LysE type translocator CFI11_RS21420 PF02803 Thiolase, C-terminal domain CFI11_RS21420 PF00108 Thiolase, N-terminal domain CFI11_RS21425 PF01740 STAS domain CFI11_RS21430 PF13581 Histidine kinase-like ATPase domain CFI11_RS21430 PF07228 Stage II sporulation protein E (SpoIIE) CFI11_RS21430 PF13466 STAS domain CFI11_RS21430 PF08448 PAS fold CFI11_RS21460 PF17854 FtsK alpha domain CFI11_RS21460 PF09397 Ftsk gamma domain CFI11_RS21460 PF01580 FtsK/SpoIIIE family CFI11_RS21460 PF13491 4TM region of DNA translocase FtsK/SpoIIIE CFI11_RS21465 PF00155 Aminotransferase class I and II CFI11_RS21470 PF01425 Amidase CFI11_RS21475 PF01494 FAD binding domain CFI11_RS21480 PF03966 Trm112p-like protein CFI11_RS21490 PF00085 Thioredoxin CFI11_RS21495 PF03372 Endonuclease/Exonuclease/phosphatase family CFI11_RS21510 PF00486 Transcriptional regulatory protein, C terminal CFI11_RS21510 PF00072 Response regulator receiver domain CFI11_RS21515 PF00925 GTP cyclohydrolase II CFI11_RS21530 PF01168 Alanine racemase, N-terminal domain CFI11_RS21545 PF12100 Domain of unknown function (DUF3576) CFI11_RS21550 PF08264 Anticodon-binding domain of tRNA CFI11_RS21550 PF13603 Leucyl-tRNA synthetase, Domain 2 CFI11_RS21550 PF00133 tRNA synthetases class I (I, L, M and V) CFI11_RS21550 PF09334 tRNA synthetases class I (M) CFI11_RS21565 PF02798 Glutathione S-transferase, N-terminal domain CFI11_RS21565 PF14497 Glutathione S-transferase, C-terminal domain CFI11_RS21580 PF00378 Enoyl-CoA hydratase/isomerase CFI11_RS21595 PF01523 Putative modulator of DNA gyrase CFI11_RS21600 PF00459 Inositol monophosphatase family CFI11_RS21615 PF02606 Tetraacyldisaccharide-1-P 4'-kinase CFI11_RS21620 PF02515 CoA-transferase family III CFI11_RS21625 PF06965 Na+/H+ antiporter 1 CFI11_RS21625 PF13462 Thioredoxin CFI11_RS21635 PF10576 Iron-sulfur binding domain of endonuclease III CFI11_RS21635 PF00633 Helix-hairpin-helix motif CFI11_RS21635 PF00730 HhH-GPD superfamily base excision DNA repair protein CFI11_RS21635 PF14815 NUDIX domain CFI11_RS21645 PF00487 Fatty acid desaturase CFI11_RS21655 PF00072 Response regulator receiver domain CFI11_RS21655 PF00211 Adenylate and Guanylate cyclase catalytic domain CFI11_RS21670 PF01555 DNA methylase CFI11_RS21670 PF18755 Restriction Enzyme Adenine Methylase Associated CFI11_RS21675 PF01351 Ribonuclease HII CFI11_RS21680 PF00682 HMGL-like CFI11_RS21680 PF08502 LeuA allosteric (dimerisation) domain CFI11_RS21685 PF00106 short chain dehydrogenase CFI11_RS21690 PF04244 Deoxyribodipyrimidine photo-lyase-related protein CFI11_RS21705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFI11_RS21705 PF03466 LysR substrate binding domain CFI11_RS21800 PF02899 Phage integrase, N-terminal SAM-like domain CFI11_RS21800 PF00589 Phage integrase family CFI11_RS21840 PF00004 ATPase family associated with various cellular activities (AAA) CFI11_RS21840 PF05362 Lon protease (S16) C-terminal proteolytic domain CFI11_RS21840 PF02190 ATP-dependent protease La (LON) substrate-binding domain CFI11_RS21850 PF00356 Bacterial regulatory proteins, lacI family CFI11_RS21850 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CFI11_RS21855 PF06224 Winged helix DNA-binding domain CFI11_RS21865 PF01202 Shikimate kinase CFI11_RS21875 PF00258 Flavodoxin CFI11_RS21890 PF00378 Enoyl-CoA hydratase/isomerase CFI11_RS21900 PF13193 AMP-binding enzyme C-terminal domain CFI11_RS21900 PF00501 AMP-binding enzyme CFI11_RS21910 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CFI11_RS21920 PF03480 Bacterial extracellular solute-binding protein, family 7 CFI11_RS21925 PF01494 FAD binding domain CFI11_RS21930 PF01557 Fumarylacetoacetate (FAA) hydrolase family CFI11_RS21935 PF07883 Cupin domain CFI11_RS21940 PF01970 Tripartite tricarboxylate transporter TctA family CFI11_RS21955 PF00486 Transcriptional regulatory protein, C terminal CFI11_RS21955 PF00072 Response regulator receiver domain CFI11_RS21960 PF00512 His Kinase A (phospho-acceptor) domain CFI11_RS21960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFI11_RS22005 PF01209 ubiE/COQ5 methyltransferase family CFI11_RS22020 PF00005 ABC transporter CFI11_RS22030 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS22035 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS22045 PF08241 Methyltransferase domain CFI11_RS22050 PF00815 Histidinol dehydrogenase CFI11_RS22060 PF00356 Bacterial regulatory proteins, lacI family CFI11_RS22090 PF00202 Aminotransferase class-III CFI11_RS22100 PF16868 NMT1-like family CFI11_RS22110 PF00582 Universal stress protein family CFI11_RS22120 PF00890 FAD binding domain CFI11_RS22120 PF04205 FMN-binding domain CFI11_RS22160 PF00486 Transcriptional regulatory protein, C terminal CFI11_RS22165 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CFI11_RS22165 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CFI11_RS22170 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CFI11_RS22170 PF00205 Thiamine pyrophosphate enzyme, central domain CFI11_RS22170 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CFI11_RS22190 PF05114 Protein of unknown function (DUF692) CFI11_RS22220 PF00557 Metallopeptidase family M24 CFI11_RS22220 PF01321 Creatinase/Prolidase N-terminal domain CFI11_RS22225 PF07993 Male sterility protein CFI11_RS22225 PF00550 Phosphopantetheine attachment site CFI11_RS22225 PF00501 AMP-binding enzyme CFI11_RS22230 PF04072 Leucine carboxyl methyltransferase CFI11_RS22235 PF00202 Aminotransferase class-III CFI11_RS22240 PF00501 AMP-binding enzyme CFI11_RS22240 PF00668 Condensation domain CFI11_RS22240 PF00550 Phosphopantetheine attachment site CFI11_RS22240 PF13193 AMP-binding enzyme C-terminal domain CFI11_RS22245 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CFI11_RS22245 PF00205 Thiamine pyrophosphate enzyme, central domain CFI11_RS22245 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CFI11_RS22260 PF00501 AMP-binding enzyme CFI11_RS22260 PF13193 AMP-binding enzyme C-terminal domain CFI11_RS22260 PF00668 Condensation domain CFI11_RS22260 PF00550 Phosphopantetheine attachment site CFI11_RS22265 PF16911 Phthiocerol/phthiodiolone dimycocerosyl transferase C-terminus CFI11_RS22280 PF00557 Metallopeptidase family M24 CFI11_RS22280 PF01321 Creatinase/Prolidase N-terminal domain CFI11_RS22290 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CFI11_RS22300 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS22305 PF12911 N-terminal TM domain of oligopeptide transport permease C CFI11_RS22305 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS22310 PF00005 ABC transporter CFI11_RS22310 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CFI11_RS22315 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CFI11_RS22315 PF00005 ABC transporter CFI11_RS22320 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CFI11_RS22325 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS22330 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS22330 PF12911 N-terminal TM domain of oligopeptide transport permease C CFI11_RS22330 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS22330 PF12911 N-terminal TM domain of oligopeptide transport permease C CFI11_RS22335 PF00005 ABC transporter CFI11_RS22335 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CFI11_RS22340 PF00005 ABC transporter CFI11_RS22345 PF02653 Branched-chain amino acid transport system / permease component CFI11_RS22365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFI11_RS22365 PF03466 LysR substrate binding domain CFI11_RS22375 PF10609 NUBPL iron-transfer P-loop NTPase CFI11_RS22380 PF01521 Iron-sulphur cluster biosynthesis CFI11_RS22380 PF01106 NifU-like domain CFI11_RS22385 PF00682 HMGL-like CFI11_RS22390 PF02515 CoA-transferase family III CFI11_RS22395 PF00330 Aconitase family (aconitate hydratase) CFI11_RS22400 PF00694 Aconitase C-terminal domain CFI11_RS22405 PF02538 Hydantoinase B/oxoprolinase CFI11_RS22410 PF01968 Hydantoinase/oxoprolinase CFI11_RS22410 PF05378 Hydantoinase/oxoprolinase N-terminal region CFI11_RS22420 PF07702 UTRA domain CFI11_RS22420 PF00392 Bacterial regulatory proteins, gntR family CFI11_RS22425 PF16347 Domain of unknown function (DUF4976) CFI11_RS22425 PF00884 Sulfatase CFI11_RS22435 PF16868 NMT1-like family CFI11_RS22440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFI11_RS22440 PF03466 LysR substrate binding domain CFI11_RS22455 PF00149 Calcineurin-like phosphoesterase CFI11_RS22460 PF00158 Sigma-54 interaction domain CFI11_RS22460 PF00072 Response regulator receiver domain CFI11_RS22460 PF02954 Bacterial regulatory protein, Fis family CFI11_RS22465 PF00989 PAS fold CFI11_RS22465 PF13426 PAS domain CFI11_RS22465 PF13188 PAS domain CFI11_RS22465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFI11_RS22465 PF00512 His Kinase A (phospho-acceptor) domain CFI11_RS22470 PF00034 Cytochrome c CFI11_RS22470 PF14376 Haem-binding domain CFI11_RS22470 PF03150 Di-haem cytochrome c peroxidase CFI11_RS22480 PF00175 Oxidoreductase NAD-binding domain CFI11_RS22480 PF00111 2Fe-2S iron-sulfur cluster binding domain CFI11_RS22480 PF00970 Oxidoreductase FAD-binding domain CFI11_RS22485 PF03466 LysR substrate binding domain CFI11_RS22485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFI11_RS22490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFI11_RS22490 PF03466 LysR substrate binding domain CFI11_RS22495 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE CFI11_RS22505 PF13677 Membrane MotB of proton-channel complex MotA/MotB CFI11_RS22505 PF00691 OmpA family CFI11_RS22510 PF14331 ImcF-related N-terminal domain CFI11_RS22510 PF06744 Type VI secretion protein IcmF C-terminal CFI11_RS22510 PF06761 Intracellular multiplication and human macrophage-killing CFI11_RS22525 PF04717 Type VI secretion system, phage-baseplate injector CFI11_RS22525 PF06715 Gp5 C-terminal repeat (3 copies) CFI11_RS22535 PF10431 C-terminal, D2-small domain, of ClpB protein CFI11_RS22535 PF17871 AAA lid domain CFI11_RS22535 PF07724 AAA domain (Cdc48 subfamily) CFI11_RS22535 PF00004 ATPase family associated with various cellular activities (AAA) CFI11_RS22545 PF05947 Type VI secretion system, TssF CFI11_RS22550 PF04965 Gene 25-like lysozyme CFI11_RS22560 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath CFI11_RS22565 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 CFI11_RS22570 PF06812 ImpA, N-terminal, type VI secretion system CFI11_RS22575 PF03793 PASTA domain CFI11_RS22575 PF00069 Protein kinase domain CFI11_RS22590 PF01594 AI-2E family transporter CFI11_RS22640 PF00211 Adenylate and Guanylate cyclase catalytic domain CFI11_RS22640 PF02743 Cache domain CFI11_RS22640 PF00672 HAMP domain CFI11_RS22650 PF00497 Bacterial extracellular solute-binding proteins, family 3 CFI11_RS22670 PF13439 Glycosyltransferase Family 4 CFI11_RS22670 PF00534 Glycosyl transferases group 1 CFI11_RS22680 PF03466 LysR substrate binding domain CFI11_RS22680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFI11_RS22690 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CFI11_RS22700 PF03480 Bacterial extracellular solute-binding protein, family 7 CFI11_RS22705 PF07729 FCD domain CFI11_RS22705 PF00392 Bacterial regulatory proteins, gntR family CFI11_RS22715 PF01678 Diaminopimelate epimerase CFI11_RS22720 PF00919 Uncharacterized protein family UPF0004 CFI11_RS22720 PF04055 Radical SAM superfamily CFI11_RS22725 PF00027 Cyclic nucleotide-binding domain CFI11_RS22725 PF13545 Crp-like helix-turn-helix domain CFI11_RS22730 PF02167 Cytochrome C1 family CFI11_RS22735 PF00032 Cytochrome b(C-terminal)/b6/petD CFI11_RS22735 PF00033 Cytochrome b/b6/petB CFI11_RS22740 PF00355 Rieske [2Fe-2S] domain CFI11_RS22740 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal CFI11_RS22745 PF13417 Glutathione S-transferase, N-terminal domain CFI11_RS22745 PF00043 Glutathione S-transferase, C-terminal domain CFI11_RS22750 PF04299 Putative FMN-binding domain CFI11_RS22755 PF00885 6,7-dimethyl-8-ribityllumazine synthase CFI11_RS22760 PF00005 ABC transporter CFI11_RS22765 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS22775 PF01264 Chorismate synthase CFI11_RS22780 PF04055 Radical SAM superfamily CFI11_RS22800 PF00291 Pyridoxal-phosphate dependent enzyme CFI11_RS22805 PF00132 Bacterial transferase hexapeptide (six repeats) CFI11_RS22805 PF14602 Hexapeptide repeat of succinyl-transferase CFI11_RS22805 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal CFI11_RS22825 PF01546 Peptidase family M20/M25/M40 CFI11_RS22825 PF07687 Peptidase dimerisation domain CFI11_RS22830 PF00773 RNB domain CFI11_RS22830 PF17876 Cold shock domain CFI11_RS22830 PF08206 Ribonuclease B OB domain CFI11_RS22830 PF00575 S1 RNA binding domain CFI11_RS22830 PF08461 Ribonuclease R winged-helix domain CFI11_RS22850 PF01593 Flavin containing amine oxidoreductase CFI11_RS22860 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term CFI11_RS22860 PF12833 Helix-turn-helix domain CFI11_RS22880 PF01968 Hydantoinase/oxoprolinase CFI11_RS22880 PF05378 Hydantoinase/oxoprolinase N-terminal region CFI11_RS22885 PF08331 Domain of unknown function (DUF1730) CFI11_RS22890 PF00043 Glutathione S-transferase, C-terminal domain CFI11_RS22890 PF13417 Glutathione S-transferase, N-terminal domain CFI11_RS22895 PF00912 Transglycosylase CFI11_RS22900 PF01493 GXGXG motif CFI11_RS22900 PF04898 Glutamate synthase central domain CFI11_RS22900 PF00310 Glutamine amidotransferases class-II CFI11_RS22900 PF01645 Conserved region in glutamate synthase CFI11_RS22920 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CFI11_RS22920 PF07992 Pyridine nucleotide-disulphide oxidoreductase CFI11_RS22925 PF02673 Bacitracin resistance protein BacA CFI11_RS22950 PF00570 HRDC domain CFI11_RS22950 PF01612 3'-5' exonuclease CFI11_RS22955 PF01380 SIS domain CFI11_RS22955 PF00571 CBS domain CFI11_RS22970 PF00005 ABC transporter CFI11_RS22975 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CFI11_RS22975 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus CFI11_RS22980 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CFI11_RS23000 PF13439 Glycosyltransferase Family 4 CFI11_RS23000 PF00534 Glycosyl transferases group 1 CFI11_RS23005 PF16363 GDP-mannose 4,6 dehydratase CFI11_RS23010 PF00483 Nucleotidyl transferase CFI11_RS23020 PF02348 Cytidylyltransferase CFI11_RS23025 PF00459 Inositol monophosphatase family CFI11_RS23040 PF13532 2OG-Fe(II) oxygenase superfamily CFI11_RS23050 PF00012 Hsp70 protein CFI11_RS23055 PF00684 DnaJ central domain CFI11_RS23055 PF01556 DnaJ C terminal domain CFI11_RS23055 PF00226 DnaJ domain CFI11_RS23065 PF04002 RadC-like JAB domain CFI11_RS23070 PF12849 PBP superfamily domain CFI11_RS23080 PF02810 SEC-C motif CFI11_RS23080 PF07517 SecA DEAD-like domain CFI11_RS23080 PF07516 SecA Wing and Scaffold domain CFI11_RS23080 PF01043 SecA preprotein cross-linking domain CFI11_RS23085 PF05698 Bacterial trigger factor protein (TF) C-terminus CFI11_RS23090 PF01960 ArgJ family CFI11_RS23095 PF00293 NUDIX domain CFI11_RS23100 PF08364 Bacterial translation initiation factor IF-2 associated region CFI11_RS23100 PF04760 Translation initiation factor IF-2, N-terminal region CFI11_RS23100 PF00009 Elongation factor Tu GTP binding domain CFI11_RS23100 PF11987 Translation-initiation factor 2 CFI11_RS23110 PF00575 S1 RNA binding domain CFI11_RS23110 PF08529 NusA N-terminal domain CFI11_RS23110 PF13184 NusA-like KH domain CFI11_RS23115 PF17384 RimP C-terminal SH3 domain CFI11_RS23115 PF02576 RimP N-terminal domain CFI11_RS23125 PF00561 alpha/beta hydrolase fold CFI11_RS23140 PF00795 Carbon-nitrogen hydrolase CFI11_RS23145 PF00462 Glutaredoxin CFI11_RS23150 PF00156 Phosphoribosyl transferase domain CFI11_RS23155 PF08241 Methyltransferase domain CFI11_RS23160 PF00762 Ferrochelatase CFI11_RS23170 PF03734 L,D-transpeptidase catalytic domain CFI11_RS23180 PF03734 L,D-transpeptidase catalytic domain CFI11_RS23190 PF05958 tRNA (Uracil-5-)-methyltransferase CFI11_RS23195 PF00664 ABC transporter transmembrane region CFI11_RS23195 PF00005 ABC transporter CFI11_RS23200 PF00005 ABC transporter CFI11_RS23200 PF00664 ABC transporter transmembrane region CFI11_RS23205 PF12627 Probable RNA and SrmB- binding site of polymerase A CFI11_RS23205 PF13735 tRNA nucleotidyltransferase domain 2 putative CFI11_RS23205 PF01743 Poly A polymerase head domain CFI11_RS23210 PF00293 NUDIX domain CFI11_RS23215 PF01430 Hsp33 protein CFI11_RS23220 PF00293 NUDIX domain CFI11_RS23225 PF00072 Response regulator receiver domain CFI11_RS23225 PF00486 Transcriptional regulatory protein, C terminal CFI11_RS23235 PF00106 short chain dehydrogenase CFI11_RS23240 PF00291 Pyridoxal-phosphate dependent enzyme CFI11_RS23240 PF00585 C-terminal regulatory domain of Threonine dehydratase CFI11_RS23250 PF00764 Arginosuccinate synthase CFI11_RS23265 PF01063 Amino-transferase class IV CFI11_RS23270 PF01625 Peptide methionine sulfoxide reductase CFI11_RS23275 PF00294 pfkB family carbohydrate kinase CFI11_RS23280 PF01515 Phosphate acetyl/butaryl transferase CFI11_RS23280 PF03949 Malic enzyme, NAD binding domain CFI11_RS23280 PF00390 Malic enzyme, N-terminal domain CFI11_RS23285 PF05190 MutS family domain IV CFI11_RS23285 PF05188 MutS domain II CFI11_RS23285 PF01624 MutS domain I CFI11_RS23285 PF00488 MutS domain V CFI11_RS23285 PF05192 MutS domain III CFI11_RS23290 PF01025 GrpE CFI11_RS23295 PF01628 HrcA protein C terminal domain CFI11_RS23300 PF01138 3' exoribonuclease family, domain 1 CFI11_RS23300 PF03725 3' exoribonuclease family, domain 2 CFI11_RS23305 PF01725 Ham1 family CFI11_RS23310 PF06969 HemN C-terminal domain CFI11_RS23310 PF04055 Radical SAM superfamily CFI11_RS23315 PF02195 ParB-like nuclease domain CFI11_RS23315 PF17762 HTH domain found in ParB protein CFI11_RS23320 PF13614 AAA domain CFI11_RS23325 PF02527 rRNA small subunit methyltransferase G CFI11_RS23330 PF01134 Glucose inhibited division protein A CFI11_RS23330 PF13932 GidA associated domain CFI11_RS23335 PF10396 GTP-binding protein TrmE N-terminus CFI11_RS23335 PF01926 50S ribosome-binding GTPase CFI11_RS23335 PF12631 MnmE helical domain CFI11_RS23340 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CFI11_RS23340 PF07498 Rho termination factor, N-terminal domain CFI11_RS23340 PF07497 Rho termination factor, RNA-binding domain CFI11_RS23345 PF03653 Uncharacterised protein family (UPF0093) CFI11_RS23350 PF13614 AAA domain CFI11_RS23355 PF17762 HTH domain found in ParB protein CFI11_RS23355 PF02195 ParB-like nuclease domain CFI11_RS23360 PF00561 alpha/beta hydrolase fold CFI11_RS23365 PF17863 AAA lid domain CFI11_RS23370 PF01078 Magnesium chelatase, subunit ChlI CFI11_RS23370 PF17863 AAA lid domain CFI11_RS23380 PF01593 Flavin containing amine oxidoreductase CFI11_RS23390 PF03073 TspO/MBR family CFI11_RS23400 PF01593 Flavin containing amine oxidoreductase CFI11_RS23405 PF00348 Polyprenyl synthetase CFI11_RS23410 PF00891 O-methyltransferase domain CFI11_RS23410 PF16864 Dimerisation domain CFI11_RS23420 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family CFI11_RS23425 PF00148 Nitrogenase component 1 type Oxidoreductase CFI11_RS23430 PF00148 Nitrogenase component 1 type Oxidoreductase CFI11_RS23430 PF08369 Proto-chlorophyllide reductase 57 kD subunit CFI11_RS23435 PF05398 PufQ cytochrome subunit CFI11_RS23440 PF00556 Antenna complex alpha/beta subunit CFI11_RS23445 PF00556 Antenna complex alpha/beta subunit CFI11_RS23450 PF00124 Photosynthetic reaction centre protein CFI11_RS23455 PF00124 Photosynthetic reaction centre protein CFI11_RS23460 PF02276 Photosynthetic reaction centre cytochrome C subunit CFI11_RS23465 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CFI11_RS23465 PF02780 Transketolase, C-terminal domain CFI11_RS23465 PF02779 Transketolase, pyrimidine binding domain CFI11_RS23470 PF00561 alpha/beta hydrolase fold CFI11_RS23475 PF03576 Peptidase family S58 CFI11_RS23480 PF07883 Cupin domain CFI11_RS23490 PF00171 Aldehyde dehydrogenase family CFI11_RS23500 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CFI11_RS23500 PF00005 ABC transporter CFI11_RS23505 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS23505 PF12911 N-terminal TM domain of oligopeptide transport permease C CFI11_RS23510 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS23515 PF00850 Histone deacetylase domain CFI11_RS23520 PF00266 Aminotransferase class-V CFI11_RS23525 PF01545 Cation efflux family CFI11_RS23530 PF02583 Metal-sensitive transcriptional repressor CFI11_RS23535 PF01040 UbiA prenyltransferase family CFI11_RS23540 PF03209 PUCC protein CFI11_RS23550 PF00293 NUDIX domain CFI11_RS23555 PF01494 FAD binding domain CFI11_RS23560 PF16363 GDP-mannose 4,6 dehydratase CFI11_RS23570 PF02563 Polysaccharide biosynthesis/export protein CFI11_RS23580 PF02397 Bacterial sugar transferase CFI11_RS23585 PF02719 Polysaccharide biosynthesis protein CFI11_RS23590 PF06082 Exopolysaccharide biosynthesis protein YbjH CFI11_RS23605 PF00294 pfkB family carbohydrate kinase CFI11_RS23610 PF00356 Bacterial regulatory proteins, lacI family CFI11_RS23615 PF00005 ABC transporter CFI11_RS23615 PF17912 MalK OB fold domain CFI11_RS23625 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS23630 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS23645 PF03928 Haem-degrading CFI11_RS23650 PF08240 Alcohol dehydrogenase GroES-like domain CFI11_RS23650 PF00107 Zinc-binding dehydrogenase CFI11_RS23660 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CFI11_RS23660 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CFI11_RS23670 PF01979 Amidohydrolase family CFI11_RS23675 PF07702 UTRA domain CFI11_RS23675 PF00392 Bacterial regulatory proteins, gntR family CFI11_RS23680 PF02515 CoA-transferase family III CFI11_RS23685 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CFI11_RS23695 PF02954 Bacterial regulatory protein, Fis family CFI11_RS23695 PF13188 PAS domain CFI11_RS23695 PF13426 PAS domain CFI11_RS23705 PF07284 2-vinyl bacteriochlorophyllide hydratase (BCHF) CFI11_RS23710 PF00148 Nitrogenase component 1 type Oxidoreductase CFI11_RS23715 PF00148 Nitrogenase component 1 type Oxidoreductase CFI11_RS23715 PF08369 Proto-chlorophyllide reductase 57 kD subunit CFI11_RS23720 PF11965 Domain of unknown function (DUF3479) CFI11_RS23720 PF02514 CobN/Magnesium Chelatase CFI11_RS23725 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family CFI11_RS23730 PF05175 Methyltransferase small domain CFI11_RS23730 PF07109 Magnesium-protoporphyrin IX methyltransferase C-terminus CFI11_RS23735 PF03209 PUCC protein CFI11_RS23740 PF05239 PRC-barrel domain CFI11_RS23740 PF03967 Photosynthetic reaction centre, H-chain N-terminal region CFI11_RS23745 PF03703 Bacterial PH domain CFI11_RS23760 PF02915 Rubrerythrin CFI11_RS23765 PF12291 Protein of unknown function (DUF3623) CFI11_RS23770 PF00155 Aminotransferase class I and II CFI11_RS23780 PF13181 Tetratricopeptide repeat CFI11_RS23785 PF01850 PIN domain CFI11_RS23800 PF10134 Replication initiator protein A CFI11_RS23805 PF01050 Mannose-6-phosphate isomerase CFI11_RS23805 PF00483 Nucleotidyl transferase CFI11_RS23810 PF16363 GDP-mannose 4,6 dehydratase CFI11_RS23815 PF01370 NAD dependent epimerase/dehydratase family CFI11_RS23820 PF03275 UDP-galactopyranose mutase CFI11_RS23840 PF00535 Glycosyl transferase family 2 CFI11_RS23880 PF00005 ABC transporter CFI11_RS23885 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) CFI11_RS23885 PF00413 Matrixin CFI11_RS23885 PF08548 Peptidase M10 serralysin C terminal CFI11_RS23895 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CFI11_RS23900 PF16363 GDP-mannose 4,6 dehydratase CFI11_RS23905 PF04321 RmlD substrate binding domain CFI11_RS23910 PF00483 Nucleotidyl transferase CFI11_RS23975 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CFI11_RS23975 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CFI11_RS23975 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CFI11_RS24010 PF00376 MerR family regulatory protein CFI11_RS24010 PF13614 AAA domain CFI11_RS24015 PF13614 AAA domain CFI11_RS24025 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CFI11_RS24025 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CFI11_RS24030 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CFI11_RS24030 PF13378 Enolase C-terminal domain-like CFI11_RS24035 PF14489 QueF-like protein CFI11_RS24050 PF00356 Bacterial regulatory proteins, lacI family CFI11_RS24050 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CFI11_RS24055 PF01370 NAD dependent epimerase/dehydratase family CFI11_RS24060 PF03480 Bacterial extracellular solute-binding protein, family 7 CFI11_RS24070 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component CFI11_RS24070 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CFI11_RS24075 PF17042 Nucleotide-binding C-terminal domain CFI11_RS24075 PF07005 Sugar-binding N-terminal domain CFI11_RS24080 PF00596 Class II Aldolase and Adducin N-terminal domain CFI11_RS24085 PF01261 Xylose isomerase-like TIM barrel CFI11_RS24090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFI11_RS24090 PF03466 LysR substrate binding domain CFI11_RS24095 PF01244 Membrane dipeptidase (Peptidase family M19) CFI11_RS24100 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CFI11_RS24105 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS24110 PF00528 Binding-protein-dependent transport system inner membrane component CFI11_RS24110 PF12911 N-terminal TM domain of oligopeptide transport permease C CFI11_RS24115 PF00005 ABC transporter CFI11_RS24115 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CFI11_RS24120 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CFI11_RS24120 PF00005 ABC transporter CFI11_RS24135 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CFI11_RS24135 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CFI11_RS24140 PF01557 Fumarylacetoacetate (FAA) hydrolase family CFI11_RS24145 PF00920 Dehydratase family CFI11_RS24155 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CFI11_RS24155 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CFI11_RS24160 PF07729 FCD domain CFI11_RS24160 PF00392 Bacterial regulatory proteins, gntR family CFI11_RS24165 PF03480 Bacterial extracellular solute-binding protein, family 7 CFI11_RS24175 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CFI11_RS24180 PF08666 SAF domain CFI11_RS24180 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus CFI11_RS24185 PF03435 Saccharopine dehydrogenase NADP binding domain CFI11_RS24185 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CFI11_RS24185 PF08501 Shikimate dehydrogenase substrate binding domain CFI11_RS24195 PF00892 EamA-like transporter family CFI11_RS24200 PF08125 Mannitol dehydrogenase C-terminal domain CFI11_RS24200 PF01232 Mannitol dehydrogenase Rossmann domain CFI11_RS24205 PF02614 Glucuronate isomerase CFI11_RS24220 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CFI11_RS24220 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CFI11_RS24225 PF03786 D-mannonate dehydratase (UxuA)