locus-tag class description R615_RS00005 PF00308 Bacterial dnaA protein R615_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix R615_RS00005 PF11638 DnaA N-terminal domain R615_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain R615_RS00010 PF02767 DNA polymerase III beta subunit, central domain R615_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain R615_RS00015 PF02463 RecF/RecN/SMC N terminal domain R615_RS00020 PF00204 DNA gyrase B R615_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus R615_RS00020 PF18053 DNA gyrase B subunit insert domain R615_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase R615_RS00020 PF01751 Toprim domain R615_RS00045 PF12146 Serine aminopeptidase, S33 R615_RS00060 PF00924 Mechanosensitive ion channel R615_RS00085 PF05746 DALR anticodon binding domain R615_RS00085 PF02092 Glycyl-tRNA synthetase beta subunit R615_RS00090 PF02091 Glycyl-tRNA synthetase alpha subunit R615_RS00095 PF17284 Spermidine synthase tetramerisation domain R615_RS00105 PF00561 alpha/beta hydrolase fold R615_RS00120 PF03989 DNA gyrase C-terminal domain, beta-propeller R615_RS00120 PF00521 DNA gyrase/topoisomerase IV, subunit A R615_RS00125 PF03707 Bacterial signalling protein N terminal repeat R615_RS00125 PF00990 Diguanylate cyclase, GGDEF domain R615_RS00125 PF00563 EAL domain R615_RS00130 PF01751 Toprim domain R615_RS00130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase R615_RS00130 PF00986 DNA gyrase B subunit, carboxyl terminus R615_RS00130 PF00204 DNA gyrase B R615_RS00135 PF05728 Uncharacterised protein family (UPF0227) R615_RS00140 PF00149 Calcineurin-like phosphoesterase R615_RS00145 PF06853 Protein of unknown function (DUF1249) R615_RS00150 PF00293 NUDIX domain R615_RS00155 PF02321 Outer membrane efflux protein R615_RS00160 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) R615_RS00165 PF01467 Cytidylyltransferase-like R615_RS00165 PF00294 pfkB family carbohydrate kinase R615_RS00170 PF01370 NAD dependent epimerase/dehydratase family R615_RS00175 PF03279 Bacterial lipid A biosynthesis acyltransferase R615_RS00180 PF00155 Aminotransferase class I and II R615_RS00180 PF00392 Bacterial regulatory proteins, gntR family R615_RS00185 PF13746 4Fe-4S dicluster domain R615_RS00185 PF12801 4Fe-4S binding domain R615_RS00185 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase R615_RS00190 PF00069 Protein kinase domain R615_RS00195 PF01226 Formate/nitrite transporter R615_RS00200 PF00441 Acyl-CoA dehydrogenase, C-terminal domain R615_RS00200 PF02770 Acyl-CoA dehydrogenase, middle domain R615_RS00200 PF02771 Acyl-CoA dehydrogenase, N-terminal domain R615_RS00230 PF00082 Subtilase family R615_RS00230 PF04151 Bacterial pre-peptidase C-terminal domain R615_RS00235 PF13335 Magnesium chelatase, subunit ChlI C-terminal R615_RS00235 PF01078 Magnesium chelatase, subunit ChlI R615_RS00245 PF02661 Fic/DOC family R615_RS00245 PF17841 BID domain of Bartonella effector protein (Bep) R615_RS00260 PF00580 UvrD/REP helicase N-terminal domain R615_RS00260 PF13361 UvrD-like helicase C-terminal domain R615_RS00285 PF08281 Sigma-70, region 4 R615_RS00285 PF04542 Sigma-70 region 2 R615_RS00305 PF02254 TrkA-N domain R615_RS00305 PF07885 Ion channel R615_RS00340 PF01380 SIS domain R615_RS00345 PF00455 DeoR C terminal sensor domain R615_RS00345 PF08220 DeoR-like helix-turn-helix domain R615_RS00360 PF01323 DSBA-like thioredoxin domain R615_RS00365 PF00034 Cytochrome c R615_RS00370 PF13442 Cytochrome C oxidase, cbb3-type, subunit III R615_RS00375 PF01926 50S ribosome-binding GTPase R615_RS00390 PF00732 GMC oxidoreductase R615_RS00390 PF05199 GMC oxidoreductase R615_RS00395 PF01367 5'-3' exonuclease, C-terminal SAM fold R615_RS00395 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain R615_RS00395 PF00476 DNA polymerase family A R615_RS00395 PF01612 3'-5' exonuclease R615_RS00405 PF01636 Phosphotransferase enzyme family R615_RS00410 PF15887 Putative zinc-binding metallo-peptidase R615_RS00410 PF10005 zinc-ribbon domain R615_RS00430 PF04973 Nicotinamide mononucleotide transporter R615_RS00440 PF00593 TonB dependent receptor R615_RS00440 PF07715 TonB-dependent Receptor Plug Domain R615_RS00445 PF01435 Peptidase family M48 R615_RS00450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase R615_RS00450 PF00072 Response regulator receiver domain R615_RS00450 PF00512 His Kinase A (phospho-acceptor) domain R615_RS00450 PF18415 Histidine kinase receptor ArcB trans-membrane domain R615_RS00450 PF01627 Hpt domain R615_RS00450 PF00989 PAS fold R615_RS00455 PF00487 Fatty acid desaturase R615_RS00500 PF01432 Peptidase family M3 R615_RS00505 PF00132 Bacterial transferase hexapeptide (six repeats) R615_RS00545 PF03942 DTW domain R615_RS00555 PF01709 Transcriptional regulator R615_RS00570 PF18317 Shikimate 5'-dehydrogenase C-terminal domain R615_RS00570 PF08501 Shikimate dehydrogenase substrate binding domain R615_RS00570 PF01488 Shikimate / quinate 5-dehydrogenase R615_RS00575 PF01218 Coproporphyrinogen III oxidase R615_RS00580 PF01300 Telomere recombination R615_RS00585 PF02481 DNA recombination-mediator protein A R615_RS00585 PF17782 DprA winged helix domain R615_RS00595 PF01327 Polypeptide deformylase R615_RS00600 PF00551 Formyl transferase R615_RS00600 PF02911 Formyl transferase, C-terminal domain R615_RS00605 PF01029 NusB family R615_RS00605 PF01189 16S rRNA methyltransferase RsmB/F R615_RS00610 PF02080 TrkA-C domain R615_RS00610 PF02254 TrkA-N domain R615_RS00615 PF02386 Cation transport protein R615_RS00620 PF00916 Sulfate permease family R615_RS00620 PF01740 STAS domain R615_RS00625 PF00582 Universal stress protein family R615_RS00630 PF04542 Sigma-70 region 2 R615_RS00630 PF08281 Sigma-70, region 4 R615_RS00655 PF00072 Response regulator receiver domain R615_RS00655 PF00486 Transcriptional regulatory protein, C terminal R615_RS00675 PF02881 SRP54-type protein, helical bundle domain R615_RS00675 PF00448 SRP54-type protein, GTPase domain R615_RS00680 PF00005 ABC transporter R615_RS00685 PF18075 FtsX extracellular domain R615_RS00690 PF04545 Sigma-70, region 4 R615_RS00690 PF04542 Sigma-70 region 2 R615_RS00690 PF00140 Sigma-70 factor, region 1.2 R615_RS00695 PF03061 Thioesterase superfamily R615_RS00700 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component R615_RS00715 PF00528 Binding-protein-dependent transport system inner membrane component R615_RS00720 PF00528 Binding-protein-dependent transport system inner membrane component R615_RS00725 PF00005 ABC transporter R615_RS00730 PF01895 PhoU domain R615_RS00735 PF13609 Gram-negative porin R615_RS00740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase R615_RS00740 PF00512 His Kinase A (phospho-acceptor) domain R615_RS00740 PF11808 Phosphate regulon sensor protein PhoR R615_RS00740 PF00989 PAS fold R615_RS00745 PF00486 Transcriptional regulatory protein, C terminal R615_RS00745 PF00072 Response regulator receiver domain R615_RS00765 PF12105 SpoU, rRNA methylase, C-terminal R615_RS00765 PF00588 SpoU rRNA Methylase family R615_RS00775 PF00072 Response regulator receiver domain R615_RS00780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase R615_RS00780 PF11808 Phosphate regulon sensor protein PhoR R615_RS00780 PF00512 His Kinase A (phospho-acceptor) domain R615_RS00780 PF00989 PAS fold R615_RS00785 PF00486 Transcriptional regulatory protein, C terminal R615_RS00785 PF00072 Response regulator receiver domain R615_RS00790 PF01040 UbiA prenyltransferase family R615_RS00795 PF00301 Rubredoxin R615_RS00800 PF18113 Rubredoxin binding C-terminal domain R615_RS00800 PF07992 Pyridine nucleotide-disulphide oxidoreductase R615_RS00805 PF00216 Bacterial DNA-binding protein R615_RS00820 PF00375 Sodium:dicarboxylate symporter family R615_RS00835 PF00271 Helicase conserved C-terminal domain R615_RS00835 PF00270 DEAD/DEAH box helicase R615_RS00835 PF17191 RecG wedge domain R615_RS00840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family R615_RS00840 PF03466 LysR substrate binding domain R615_RS00855 PF01042 Endoribonuclease L-PSP R615_RS00860 PF13291 ACT domain R615_RS00860 PF02824 TGS domain R615_RS00860 PF04607 Region found in RelA / SpoT proteins R615_RS00865 PF01192 RNA polymerase Rpb6 R615_RS00870 PF00625 Guanylate kinase R615_RS00875 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase R615_RS00880 PF08340 Domain of unknown function (DUF1732) R615_RS00880 PF03755 YicC-like family, N-terminal region R615_RS00885 PF01138 3' exoribonuclease family, domain 1 R615_RS00885 PF03725 3' exoribonuclease family, domain 2 R615_RS00895 PF00156 Phosphoribosyl transferase domain R615_RS00905 PF00440 Bacterial regulatory proteins, tetR family R615_RS00910 PF00696 Amino acid kinase family R615_RS00915 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III R615_RS00915 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II R615_RS00915 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain R615_RS00915 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I R615_RS00920 PF00692 dUTPase R615_RS00925 PF04127 DNA / pantothenate metabolism flavoprotein R615_RS00925 PF02441 Flavoprotein R615_RS00930 PF04002 RadC-like JAB domain R615_RS00935 PF00830 Ribosomal L28 family R615_RS00940 PF00471 Ribosomal protein L33 R615_RS00945 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain R615_RS00945 PF06827 Zinc finger found in FPG and IleRS R615_RS00945 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain R615_RS00955 PF02698 DUF218 domain R615_RS00965 PF00037 4Fe-4S binding domain R615_RS00970 PF01467 Cytidylyltransferase-like R615_RS00975 PF05199 GMC oxidoreductase R615_RS00975 PF00732 GMC oxidoreductase R615_RS00985 PF00171 Aldehyde dehydrogenase family R615_RS00990 PF02909 Tetracyclin repressor-like, C-terminal domain R615_RS00990 PF00440 Bacterial regulatory proteins, tetR family R615_RS01015 PF03600 Citrate transporter R615_RS01015 PF02080 TrkA-C domain R615_RS01025 PF00902 Sec-independent protein translocase protein (TatC) R615_RS01030 PF02416 mttA/Hcf106 family R615_RS01035 PF02416 mttA/Hcf106 family R615_RS01040 PF01230 HIT domain R615_RS01045 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase R615_RS01050 PF01502 Phosphoribosyl-AMP cyclohydrolase R615_RS01055 PF03109 ABC1 family R615_RS01065 PF01209 ubiE/COQ5 methyltransferase family R615_RS01085 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) R615_RS01085 PF00072 Response regulator receiver domain R615_RS01085 PF00672 HAMP domain R615_RS01085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase R615_RS01085 PF00512 His Kinase A (phospho-acceptor) domain R615_RS01085 PF01627 Hpt domain R615_RS01095 PF07715 TonB-dependent Receptor Plug Domain R615_RS01095 PF00593 TonB dependent receptor R615_RS01100 PF13488 Glycine zipper R615_RS01100 PF00691 OmpA family R615_RS01110 PF13472 GDSL-like Lipase/Acylhydrolase family R615_RS01115 PF00005 ABC transporter R615_RS01125 PF01435 Peptidase family M48 R615_RS01130 PF04011 LemA family R615_RS01140 PF13617 YnbE-like lipoprotein R615_RS01145 PF00270 DEAD/DEAH box helicase R615_RS01145 PF00271 Helicase conserved C-terminal domain R615_RS01150 PF13442 Cytochrome C oxidase, cbb3-type, subunit III R615_RS01170 PF01678 Diaminopimelate epimerase R615_RS01175 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain R615_RS01175 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain R615_RS01180 PF01295 Adenylate cyclase, class-I R615_RS01180 PF12633 Adenylate cyclase NT domain R615_RS01185 PF01979 Amidohydrolase family R615_RS01190 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain R615_RS01190 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain R615_RS01195 PF00156 Phosphoribosyl transferase domain R615_RS01200 PF03652 Holliday junction resolvase R615_RS01205 PF02622 Uncharacterized ACR, COG1678 R615_RS01215 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain R615_RS01215 PF02951 Prokaryotic glutathione synthetase, N-terminal domain R615_RS01220 PF00072 Response regulator receiver domain R615_RS01225 PF00072 Response regulator receiver domain R615_RS01230 PF01584 CheW-like domain R615_RS01235 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain R615_RS01235 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term R615_RS01240 PF01739 CheR methyltransferase, SAM binding domain R615_RS01240 PF03705 CheR methyltransferase, all-alpha domain R615_RS01245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase R615_RS01245 PF00072 Response regulator receiver domain R615_RS01245 PF01627 Hpt domain R615_RS01245 PF01584 CheW-like domain R615_RS01245 PF02895 Signal transducing histidine kinase, homodimeric domain R615_RS01250 PF01339 CheB methylesterase R615_RS01250 PF00072 Response regulator receiver domain R615_RS01275 PF00884 Sulfatase R615_RS01305 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain R615_RS01305 PF05221 S-adenosyl-L-homocysteine hydrolase R615_RS01310 PF02772 S-adenosylmethionine synthetase, central domain R615_RS01310 PF02773 S-adenosylmethionine synthetase, C-terminal domain R615_RS01310 PF00438 S-adenosylmethionine synthetase, N-terminal domain R615_RS01315 PF01022 Bacterial regulatory protein, arsR family R615_RS01320 PF07726 ATPase family associated with various cellular activities (AAA) R615_RS01320 PF17863 AAA lid domain R615_RS01330 PF11992 Domain of unknown function (DUF3488) R615_RS01330 PF13559 Domain of unknown function (DUF4129) R615_RS01330 PF01841 Transglutaminase-like superfamily R615_RS01340 PF01131 DNA topoisomerase R615_RS01340 PF01751 Toprim domain R615_RS01355 PF01063 Amino-transferase class IV R615_RS01360 PF03710 Glutamate-ammonia ligase adenylyltransferase R615_RS01360 PF08335 GlnD PII-uridylyltransferase R615_RS01365 PF00528 Binding-protein-dependent transport system inner membrane component R615_RS01370 PF00528 Binding-protein-dependent transport system inner membrane component R615_RS01375 PF08402 TOBE domain R615_RS01375 PF00005 ABC transporter R615_RS01380 PF13416 Bacterial extracellular solute-binding protein R615_RS01385 PF00912 Transglycosylase R615_RS01385 PF00905 Penicillin binding protein transpeptidase domain R615_RS01385 PF14814 Bifunctional transglycosylase second domain R615_RS01395 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain R615_RS01395 PF12729 Four helix bundle sensory module for signal transduction R615_RS01395 PF00672 HAMP domain R615_RS01405 PF00202 Aminotransferase class-III R615_RS01410 PF03653 Uncharacterised protein family (UPF0093) R615_RS01420 PF01118 Semialdehyde dehydrogenase, NAD binding domain R615_RS01420 PF02774 Semialdehyde dehydrogenase, dimerisation domain R615_RS01435 PF01521 Iron-sulphur cluster biosynthesis R615_RS01445 PF03702 Anhydro-N-acetylmuramic acid kinase R615_RS01450 PF04225 Opacity-associated protein A LysM-like domain R615_RS01450 PF01551 Peptidase family M23 R615_RS01455 PF00579 tRNA synthetases class I (W and Y) R615_RS01495 PF08502 LeuA allosteric (dimerisation) domain R615_RS01495 PF00682 HMGL-like R615_RS01505 PF00583 Acetyltransferase (GNAT) family R615_RS01515 PF02954 Bacterial regulatory protein, Fis family R615_RS01515 PF00072 Response regulator receiver domain R615_RS01530 PF03485 Arginyl tRNA synthetase N terminal domain R615_RS01530 PF05746 DALR anticodon binding domain R615_RS01530 PF00750 tRNA synthetases class I (R) R615_RS01535 PF05036 Sporulation related domain R615_RS01540 PF00271 Helicase conserved C-terminal domain R615_RS01540 PF16124 RecQ zinc-binding R615_RS01540 PF09382 RQC domain R615_RS01540 PF00270 DEAD/DEAH box helicase R615_RS01540 PF00570 HRDC domain R615_RS01565 PF04362 Bacterial Fe(2+) trafficking R615_RS01570 PF00633 Helix-hairpin-helix motif R615_RS01570 PF00730 HhH-GPD superfamily base excision DNA repair protein R615_RS01570 PF14815 NUDIX domain R615_RS01575 PF03707 Bacterial signalling protein N terminal repeat R615_RS01575 PF00563 EAL domain R615_RS01575 PF00990 Diguanylate cyclase, GGDEF domain R615_RS01590 PF00475 Imidazoleglycerol-phosphate dehydratase R615_RS01595 PF00117 Glutamine amidotransferase class-I R615_RS01600 PF00977 Histidine biosynthesis protein R615_RS01605 PF00977 Histidine biosynthesis protein R615_RS01610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain R615_RS01610 PF00672 HAMP domain R615_RS01610 PF12729 Four helix bundle sensory module for signal transduction R615_RS01620 PF00920 Dehydratase family R615_RS01630 PF17770 Ribonuclease J C-terminal domain R615_RS01630 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain R615_RS01630 PF12706 Beta-lactamase superfamily domain R615_RS01640 PF01145 SPFH domain / Band 7 family R615_RS01660 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE R615_RS01670 PF14331 ImcF-related N-terminal domain R615_RS01670 PF06761 Intracellular multiplication and human macrophage-killing R615_RS01670 PF06744 Type VI secretion protein IcmF C-terminal R615_RS01685 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 R615_RS01690 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath R615_RS01715 PF10431 C-terminal, D2-small domain, of ClpB protein R615_RS01715 PF17871 AAA lid domain R615_RS01715 PF07724 AAA domain (Cdc48 subfamily) R615_RS01715 PF00004 ATPase family associated with various cellular activities (AAA) R615_RS01780 PF06715 Gp5 C-terminal repeat (3 copies) R615_RS01780 PF04717 Type VI secretion system, phage-baseplate injector R615_RS01820 PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) R615_RS01820 PF07581 The GLUG motif R615_RS01835 PF03144 Elongation factor Tu domain 2 R615_RS01835 PF00009 Elongation factor Tu GTP binding domain R615_RS01835 PF16658 Class II release factor RF3, C-terminal domain R615_RS01845 PF00572 Ribosomal protein L13 R615_RS01850 PF00380 Ribosomal protein S9/S16 R615_RS01855 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal R615_RS01855 PF00355 Rieske [2Fe-2S] domain R615_RS01860 PF00032 Cytochrome b(C-terminal)/b6/petD R615_RS01860 PF00033 Cytochrome b/b6/petB R615_RS01865 PF02167 Cytochrome C1 family R615_RS01870 PF00043 Glutathione S-transferase, C-terminal domain R615_RS01870 PF02798 Glutathione S-transferase, N-terminal domain R615_RS01875 PF04386 Stringent starvation protein B R615_RS01880 PF08207 Elongation factor P (EF-P) KOW-like domain R615_RS01880 PF01132 Elongation factor P (EF-P) OB domain R615_RS01880 PF09285 Elongation factor P, C-terminal R615_RS01910 PF01568 Molydopterin dinucleotide binding domain R615_RS01910 PF00384 Molybdopterin oxidoreductase R615_RS01940 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system R615_RS01945 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system R615_RS02000 PF02637 GatB domain R615_RS02000 PF02934 GatB/GatE catalytic domain R615_RS02005 PF01425 Amidase R615_RS02010 PF02686 Glu-tRNAGln amidotransferase C subunit R615_RS02020 PF04085 rod shape-determining protein MreC R615_RS02025 PF04093 rod shape-determining protein MreD R615_RS02030 PF02545 Maf-like protein R615_RS02035 PF00575 S1 RNA binding domain R615_RS02035 PF10150 Ribonuclease E/G family R615_RS02045 PF00795 Carbon-nitrogen hydrolase R615_RS02050 PF04751 Protein of unknown function (DUF615) R615_RS02055 PF01769 Divalent cation transporter R615_RS02055 PF00571 CBS domain R615_RS02055 PF03448 MgtE intracellular N domain R615_RS02060 PF00381 PTS HPr component phosphorylation site R615_RS02065 PF03668 P-loop ATPase protein family R615_RS02070 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 R615_RS02075 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein R615_RS02080 PF04963 Sigma-54 factor, core binding domain R615_RS02080 PF00309 Sigma-54 factor, Activator interacting domain (AID) R615_RS02080 PF04552 Sigma-54, DNA binding domain R615_RS02085 PF12399 Branched-chain amino acid ATP-binding cassette transporter R615_RS02085 PF00005 ABC transporter R615_RS02090 PF03968 OstA-like protein R615_RS02100 PF01380 SIS domain R615_RS02100 PF00571 CBS domain R615_RS02105 PF01699 Sodium/calcium exchanger protein R615_RS02110 PF00005 ABC transporter R615_RS02115 PF02405 Permease MlaE R615_RS02120 PF02470 MlaD protein R615_RS02130 PF01722 BolA-like protein R615_RS02135 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) R615_RS02140 PF01634 ATP phosphoribosyltransferase R615_RS02145 PF00815 Histidinol dehydrogenase R615_RS02150 PF00155 Aminotransferase class I and II R615_RS02155 PF13180 PDZ domain R615_RS02160 PF01784 NIF3 (NGG1p interacting factor 3) R615_RS02170 PF05661 Protein of unknown function (DUF808) R615_RS02175 PF00892 EamA-like transporter family R615_RS02185 PF00117 Glutamine amidotransferase class-I R615_RS02185 PF06418 CTP synthase N-terminus R615_RS02190 PF03952 Enolase, N-terminal domain R615_RS02190 PF00113 Enolase, C-terminal TIM barrel domain R615_RS02235 PF00990 Diguanylate cyclase, GGDEF domain R615_RS02235 PF07694 5TMR of 5TMR-LYT R615_RS02240 PF04977 Septum formation initiator R615_RS02245 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase R615_RS02250 PF02542 YgbB family R615_RS02255 PF01142 tRNA pseudouridine synthase D (TruD) R615_RS02260 PF01975 Survival protein SurE R615_RS02275 PF01551 Peptidase family M23 R615_RS02275 PF01476 LysM domain R615_RS02280 PF00140 Sigma-70 factor, region 1.2 R615_RS02280 PF04545 Sigma-70, region 4 R615_RS02280 PF04539 Sigma-70 region 3 R615_RS02280 PF04542 Sigma-70 region 2 R615_RS02285 PF00436 Single-strand binding protein family R615_RS02290 PF07690 Major Facilitator Superfamily R615_RS02295 PF00196 Bacterial regulatory proteins, luxR family R615_RS02300 PF17755 UvrA DNA-binding domain R615_RS02300 PF17760 UvrA interaction domain R615_RS02320 PF00072 Response regulator receiver domain R615_RS02320 PF00211 Adenylate and Guanylate cyclase catalytic domain R615_RS02340 PF04055 Radical SAM superfamily R615_RS02345 PF01132 Elongation factor P (EF-P) OB domain R615_RS02345 PF08207 Elongation factor P (EF-P) KOW-like domain R615_RS02345 PF09285 Elongation factor P, C-terminal R615_RS02350 PF00152 tRNA synthetases class II (D, K and N) R615_RS02360 PF00732 GMC oxidoreductase R615_RS02360 PF05199 GMC oxidoreductase R615_RS02370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family R615_RS02370 PF03466 LysR substrate binding domain R615_RS02375 PF02666 Phosphatidylserine decarboxylase R615_RS02380 PF00581 Rhodanese-like domain R615_RS02390 PF01618 MotA/TolQ/ExbB proton channel family R615_RS02395 PF13677 Membrane MotB of proton-channel complex MotA/MotB R615_RS02395 PF00691 OmpA family R615_RS02405 PF03193 RsgA GTPase R615_RS02410 PF00929 Exonuclease R615_RS02415 PF08331 Domain of unknown function (DUF1730) R615_RS02420 PF03853 YjeF-related protein N-terminus R615_RS02420 PF01256 Carbohydrate kinase R615_RS02425 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE R615_RS02430 PF11741 AMIN domain R615_RS02430 PF01520 N-acetylmuramoyl-L-alanine amidase R615_RS02435 PF08676 MutL C terminal dimerisation domain R615_RS02435 PF01119 DNA mismatch repair protein, C-terminal domain R615_RS02445 PF17209 Hfq protein R615_RS02450 PF16360 GTP-binding GTPase Middle Region R615_RS02450 PF01926 50S ribosome-binding GTPase R615_RS02450 PF13167 GTP-binding GTPase N-terminal R615_RS02455 PF01145 SPFH domain / Band 7 family R615_RS02455 PF12221 Bacterial membrane protein N terminal R615_RS02460 PF01145 SPFH domain / Band 7 family R615_RS02470 PF13393 Histidyl-tRNA synthetase R615_RS02475 PF00709 Adenylosuccinate synthetase R615_RS02485 PF00795 Carbon-nitrogen hydrolase R615_RS02485 PF00583 Acetyltransferase (GNAT) family R615_RS02490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family R615_RS02490 PF03466 LysR substrate binding domain R615_RS02495 PF08240 Alcohol dehydrogenase GroES-like domain R615_RS02495 PF00107 Zinc-binding dehydrogenase R615_RS02500 PF00756 Putative esterase R615_RS02505 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath R615_RS02515 PF13419 Haloacid dehalogenase-like hydrolase R615_RS02520 PF03079 ARD/ARD' family R615_RS02525 PF00596 Class II Aldolase and Adducin N-terminal domain R615_RS02530 PF01008 Initiation factor 2 subunit family R615_RS02535 PF00342 Phosphoglucose isomerase R615_RS02540 PF02261 Aspartate decarboxylase R615_RS02545 PF02569 Pantoate-beta-alanine ligase R615_RS02550 PF02548 Ketopantoate hydroxymethyltransferase R615_RS02555 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) R615_RS02560 PF12626 Polymerase A arginine-rich C-terminus R615_RS02560 PF01743 Poly A polymerase head domain R615_RS02560 PF12627 Probable RNA and SrmB- binding site of polymerase A R615_RS02565 PF00072 Response regulator receiver domain R615_RS02565 PF02954 Bacterial regulatory protein, Fis family R615_RS02565 PF00158 Sigma-54 interaction domain R615_RS02570 PF00989 PAS fold R615_RS02570 PF08447 PAS fold R615_RS02570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase R615_RS02570 PF00512 His Kinase A (phospho-acceptor) domain R615_RS02580 PF00749 tRNA synthetases class I (E and Q), catalytic domain R615_RS02585 PF01258 Prokaryotic dksA/traR C4-type zinc finger R615_RS02590 PF00155 Aminotransferase class I and II R615_RS02595 PF03749 Sugar fermentation stimulation protein RE domain R615_RS02595 PF17746 SfsA N-terminal OB domain R615_RS02610 PF00583 Acetyltransferase (GNAT) family R615_RS02610 PF00795 Carbon-nitrogen hydrolase R615_RS02620 PF01032 FecCD transport family R615_RS02625 PF00005 ABC transporter R615_RS02640 PF03104 DNA polymerase family B, exonuclease domain R615_RS02640 PF00136 DNA polymerase family B R615_RS02645 PF01544 CorA-like Mg2+ transporter protein R615_RS02650 PF03062 MBOAT, membrane-bound O-acyltransferase family R615_RS02665 PF04748 Divergent polysaccharide deacetylase R615_RS02670 PF03572 Peptidase family S41 R615_RS02670 PF13180 PDZ domain R615_RS02675 PF01551 Peptidase family M23 R615_RS02680 PF01676 Metalloenzyme superfamily R615_RS02680 PF06415 BPG-independent PGAM N-terminus (iPGM_N) R615_RS02685 PF00581 Rhodanese-like domain R615_RS02690 PF02556 Preprotein translocase subunit SecB R615_RS02730 PF00588 SpoU rRNA Methylase family R615_RS02755 PF00263 Bacterial type II and III secretion system protein R615_RS02755 PF03958 Bacterial type II/III secretion system short domain R615_RS02760 PF01471 Putative peptidoglycan binding domain R615_RS02760 PF13401 AAA domain R615_RS02770 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain R615_RS02770 PF00437 Type II/IV secretion system protein R615_RS02775 PF00482 Type II secretion system (T2SS), protein F R615_RS02785 PF07963 Prokaryotic N-terminal methylation motif R615_RS02830 PF02954 Bacterial regulatory protein, Fis family R615_RS02830 PF00072 Response regulator receiver domain R615_RS02830 PF00158 Sigma-54 interaction domain R615_RS02835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase R615_RS02835 PF00512 His Kinase A (phospho-acceptor) domain R615_RS02845 PF02580 D-Tyr-tRNA(Tyr) deacylase R615_RS02850 PF04247 Invasion gene expression up-regulator, SirB R615_RS02870 PF00873 AcrB/AcrD/AcrF family R615_RS02875 PF00672 HAMP domain R615_RS02875 PF02743 Cache domain R615_RS02875 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain R615_RS02885 PF01169 Uncharacterized protein family UPF0016 R615_RS02920 PF03776 Septum formation topological specificity factor MinE R615_RS02925 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain R615_RS02930 PF03775 Septum formation inhibitor MinC, C-terminal domain R615_RS02930 PF05209 Septum formation inhibitor MinC, N-terminal domain R615_RS02940 PF11799 impB/mucB/samB family C-terminal domain R615_RS02940 PF00817 impB/mucB/samB family R615_RS02940 PF11798 IMS family HHH motif R615_RS02945 PF01569 PAP2 superfamily R615_RS02950 PF13439 Glycosyltransferase Family 4 R615_RS02950 PF00534 Glycosyl transferases group 1 R615_RS02955 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term R615_RS02955 PF12833 Helix-turn-helix domain R615_RS02970 PF00258 Flavodoxin R615_RS02995 PF01266 FAD dependent oxidoreductase R615_RS03025 PF00158 Sigma-54 interaction domain R615_RS03025 PF00072 Response regulator receiver domain R615_RS03025 PF02954 Bacterial regulatory protein, Fis family R615_RS03030 PF00534 Glycosyl transferases group 1 R615_RS03030 PF13439 Glycosyltransferase Family 4 R615_RS03035 PF05036 Sporulation related domain R615_RS03035 PF03330 Lytic transglycolase R615_RS03040 PF13406 Transglycosylase SLT domain R615_RS03045 PF01098 Cell cycle protein R615_RS03050 PF03717 Penicillin-binding Protein dimerisation domain R615_RS03050 PF00905 Penicillin binding protein transpeptidase domain R615_RS03055 PF02590 Predicted SPOUT methyltransferase R615_RS03065 PF01467 Cytidylyltransferase-like R615_RS03070 PF00171 Aldehyde dehydrogenase family R615_RS03095 PF09335 SNARE associated Golgi protein R615_RS03105 PF04287 tRNA pseudouridine synthase C R615_RS03115 PF02810 SEC-C motif R615_RS03130 PF00768 D-alanyl-D-alanine carboxypeptidase R615_RS03130 PF07943 Penicillin-binding protein 5, C-terminal domain R615_RS03135 PF04359 Protein of unknown function (DUF493) R615_RS03140 PF03099 Biotin/lipoate A/B protein ligase family R615_RS03145 PF04055 Radical SAM superfamily R615_RS03145 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family R615_RS03155 PF00072 Response regulator receiver domain R615_RS03165 PF00085 Thioredoxin R615_RS03170 PF02683 Cytochrome C biogenesis protein transmembrane region R615_RS03170 PF11412 Disulphide bond corrector protein DsbC R615_RS03175 PF00348 Polyprenyl synthetase R615_RS03180 PF00829 Ribosomal prokaryotic L21 protein R615_RS03185 PF01016 Ribosomal L27 protein R615_RS03190 PF01018 GTP1/OBG R615_RS03190 PF01926 50S ribosome-binding GTPase R615_RS03195 PF01472 PUA domain R615_RS03195 PF00696 Amino acid kinase family R615_RS03200 PF00793 DAHP synthetase I family R615_RS03205 PF01649 Ribosomal protein S20 R615_RS03210 PF03023 Lipid II flippase MurJ R615_RS03215 PF06574 FAD synthetase R615_RS03215 PF01687 Riboflavin kinase R615_RS03220 PF08264 Anticodon-binding domain of tRNA R615_RS03220 PF00133 tRNA synthetases class I (I, L, M and V) R615_RS03220 PF06827 Zinc finger found in FPG and IleRS R615_RS03225 PF01252 Signal peptidase (SPase) II R615_RS03230 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase R615_RS03235 PF02401 LytB protein R615_RS03280 PF00158 Sigma-54 interaction domain R615_RS03280 PF00072 Response regulator receiver domain R615_RS03280 PF02954 Bacterial regulatory protein, Fis family R615_RS03285 PF00512 His Kinase A (phospho-acceptor) domain R615_RS03285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase R615_RS03290 PF00795 Carbon-nitrogen hydrolase R615_RS03290 PF02540 NAD synthase R615_RS03305 PF13525 Outer membrane lipoprotein R615_RS03310 PF00849 RNA pseudouridylate synthase R615_RS03310 PF01479 S4 domain R615_RS03315 PF02578 Multi-copper polyphenol oxidoreductase laccase R615_RS03320 PF00205 Thiamine pyrophosphate enzyme, central domain R615_RS03320 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain R615_RS03320 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain R615_RS03325 PF10369 Small subunit of acetolactate synthase R615_RS03330 PF03232 Ubiquinone biosynthesis protein COQ7 R615_RS03335 PF01434 Peptidase family M41 R615_RS03335 PF17862 AAA+ lid domain R615_RS03335 PF00004 ATPase family associated with various cellular activities (AAA) R615_RS03340 PF00512 His Kinase A (phospho-acceptor) domain R615_RS03340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase R615_RS03340 PF01627 Hpt domain R615_RS03340 PF00072 Response regulator receiver domain R615_RS03345 PF02844 Phosphoribosylglycinamide synthetase, N domain R615_RS03345 PF02843 Phosphoribosylglycinamide synthetase, C domain R615_RS03345 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain R615_RS03350 PF02142 MGS-like domain R615_RS03350 PF01808 AICARFT/IMPCHase bienzyme R615_RS03355 PF02954 Bacterial regulatory protein, Fis family R615_RS03360 PF01207 Dihydrouridine synthase (Dus) R615_RS03375 PF01220 Dehydroquinase class II R615_RS03385 PF00990 Diguanylate cyclase, GGDEF domain R615_RS03385 PF03707 Bacterial signalling protein N terminal repeat R615_RS03385 PF00563 EAL domain R615_RS03385 PF13188 PAS domain R615_RS03395 PF00034 Cytochrome c R615_RS03400 PF01968 Hydantoinase/oxoprolinase R615_RS03400 PF05378 Hydantoinase/oxoprolinase N-terminal region R615_RS03410 PF12848 ABC transporter R615_RS03410 PF00005 ABC transporter R615_RS03415 PF08448 PAS fold R615_RS03415 PF00990 Diguanylate cyclase, GGDEF domain R615_RS03420 PF07992 Pyridine nucleotide-disulphide oxidoreductase R615_RS03420 PF00724 NADH:flavin oxidoreductase / NADH oxidase family R615_RS03435 PF02872 5'-nucleotidase, C-terminal domain R615_RS03435 PF00149 Calcineurin-like phosphoesterase R615_RS03440 PF00462 Glutaredoxin R615_RS03445 PF00487 Fatty acid desaturase R615_RS03455 PF14718 Soluble lytic murein transglycosylase L domain R615_RS03455 PF01464 Transglycosylase SLT domain R615_RS03460 PF01923 Cobalamin adenosyltransferase R615_RS03465 PF07715 TonB-dependent Receptor Plug Domain R615_RS03465 PF00593 TonB dependent receptor R615_RS03470 PF13426 PAS domain R615_RS03470 PF13188 PAS domain R615_RS03470 PF00989 PAS fold R615_RS03470 PF00512 His Kinase A (phospho-acceptor) domain R615_RS03470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase R615_RS03475 PF02558 Ketopantoate reductase PanE/ApbA R615_RS03475 PF08546 Ketopantoate reductase PanE/ApbA C terminal R615_RS03485 PF04461 Protein of unknown function (DUF520) R615_RS03490 PF07690 Major Facilitator Superfamily R615_RS03495 PF17657 Bacterial DNA polymerase III alpha subunit finger domain R615_RS03495 PF07733 Bacterial DNA polymerase III alpha NTPase domain R615_RS03495 PF01336 OB-fold nucleic acid binding domain R615_RS03495 PF02811 PHP domain R615_RS03495 PF14579 Helix-hairpin-helix motif R615_RS03505 PF03846 Cell division inhibitor SulA R615_RS03515 PF03466 LysR substrate binding domain R615_RS03515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family R615_RS03550 PF00106 short chain dehydrogenase R615_RS03565 PF03441 FAD binding domain of DNA photolyase R615_RS03565 PF00875 DNA photolyase R615_RS03575 PF08349 Protein of unknown function (DUF1722) R615_RS03585 PF01593 Flavin containing amine oxidoreductase R615_RS03590 PF12806 Acetyl-CoA dehydrogenase C-terminal like R615_RS03590 PF00441 Acyl-CoA dehydrogenase, C-terminal domain R615_RS03590 PF02770 Acyl-CoA dehydrogenase, middle domain R615_RS03590 PF02771 Acyl-CoA dehydrogenase, N-terminal domain R615_RS03595 PF01370 NAD dependent epimerase/dehydratase family R615_RS03595 PF08338 Domain of unknown function (DUF1731) R615_RS03635 PF13005 zinc-finger binding domain of transposase IS66 R615_RS03635 PF13817 IS66 C-terminal element R615_RS03635 PF13007 Transposase C of IS166 homeodomain R615_RS03635 PF03050 Transposase IS66 family R615_RS03650 PF02917 Pertussis toxin, subunit 1 R615_RS03655 PF01645 Conserved region in glutamate synthase R615_RS03660 PF02696 Uncharacterized ACR, YdiU/UPF0061 family R615_RS03675 PF00528 Binding-protein-dependent transport system inner membrane component R615_RS03680 PF00005 ABC transporter R615_RS03680 PF03459 TOBE domain R615_RS03685 PF03441 FAD binding domain of DNA photolyase R615_RS03685 PF00875 DNA photolyase R615_RS03690 PF04244 Deoxyribodipyrimidine photo-lyase-related protein R615_RS03700 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain R615_RS03700 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain R615_RS03700 PF00378 Enoyl-CoA hydratase/isomerase R615_RS03705 PF00441 Acyl-CoA dehydrogenase, C-terminal domain R615_RS03705 PF02771 Acyl-CoA dehydrogenase, N-terminal domain R615_RS03705 PF12806 Acetyl-CoA dehydrogenase C-terminal like R615_RS03705 PF02770 Acyl-CoA dehydrogenase, middle domain R615_RS03710 PF00465 Iron-containing alcohol dehydrogenase R615_RS03715 PF03061 Thioesterase superfamily R615_RS03720 PF00171 Aldehyde dehydrogenase family R615_RS03735 PF12833 Helix-turn-helix domain R615_RS03735 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term R615_RS03750 PF00563 EAL domain R615_RS03750 PF01590 GAF domain R615_RS03750 PF00990 Diguanylate cyclase, GGDEF domain R615_RS03750 PF00360 Phytochrome region R615_RS03760 PF07804 HipA-like C-terminal domain R615_RS03760 PF13657 HipA N-terminal domain R615_RS03785 PF00176 SNF2 family N-terminal domain R615_RS03785 PF00271 Helicase conserved C-terminal domain R615_RS03795 PF01668 SmpB protein R615_RS03800 PF00209 Sodium:neurotransmitter symporter family R615_RS03805 PF03364 Polyketide cyclase / dehydrase and lipid transport R615_RS03810 PF03658 RnfH family Ubiquitin R615_RS03815 PF04355 SmpA / OmlA family R615_RS03820 PF01475 Ferric uptake regulator family R615_RS03825 PF02463 RecF/RecN/SMC N terminal domain R615_RS03830 PF01025 GrpE R615_RS03835 PF00012 Hsp70 protein R615_RS03840 PF01556 DnaJ C terminal domain R615_RS03840 PF00226 DnaJ domain R615_RS03840 PF00684 DnaJ central domain R615_RS03845 PF01113 Dihydrodipicolinate reductase, N-terminus R615_RS03845 PF05173 Dihydrodipicolinate reductase, C-terminus R615_RS03855 PF00440 Bacterial regulatory proteins, tetR family R615_RS03860 PF00117 Glutamine amidotransferase class-I R615_RS03860 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain R615_RS03865 PF02142 MGS-like domain R615_RS03865 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain R615_RS03865 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain R615_RS03870 PF03449 Transcription elongation factor, N-terminal R615_RS03870 PF01272 Transcription elongation factor, GreA/GreB, C-term R615_RS03885 PF03061 Thioesterase superfamily R615_RS03890 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III R615_RS03890 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal R615_RS03895 PF01985 CRS1 / YhbY (CRM) domain R615_RS03900 PF01728 FtsJ-like methyltransferase R615_RS03905 PF00004 ATPase family associated with various cellular activities (AAA) R615_RS03905 PF01434 Peptidase family M41 R615_RS03905 PF17862 AAA+ lid domain R615_RS03905 PF06480 FtsH Extracellular R615_RS03910 PF00809 Pterin binding enzyme R615_RS03915 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III R615_RS03915 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II R615_RS03915 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I R615_RS03915 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain R615_RS03920 PF00121 Triosephosphate isomerase R615_RS03925 PF03840 Preprotein translocase SecG subunit R615_RS03935 PF02576 RimP N-terminal domain R615_RS03935 PF17384 RimP C-terminal SH3 domain R615_RS03940 PF08529 NusA N-terminal domain R615_RS03940 PF13184 NusA-like KH domain R615_RS03940 PF00575 S1 RNA binding domain R615_RS03945 PF11987 Translation-initiation factor 2 R615_RS03945 PF08364 Bacterial translation initiation factor IF-2 associated region R615_RS03945 PF00009 Elongation factor Tu GTP binding domain R615_RS03945 PF04760 Translation initiation factor IF-2, N-terminal region R615_RS03950 PF02033 Ribosome-binding factor A R615_RS03955 PF09157 Pseudouridine synthase II TruB, C-terminal R615_RS03955 PF01509 TruB family pseudouridylate synthase (N terminal domain) R615_RS03955 PF16198 tRNA pseudouridylate synthase B C-terminal domain R615_RS03960 PF00312 Ribosomal protein S15 R615_RS03965 PF03725 3' exoribonuclease family, domain 2 R615_RS03965 PF00013 KH domain R615_RS03965 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain R615_RS03965 PF01138 3' exoribonuclease family, domain 1 R615_RS03965 PF00575 S1 RNA binding domain R615_RS03990 PF02567 Phenazine biosynthesis-like protein R615_RS03995 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain R615_RS03995 PF10996 Beta-Casp domain R615_RS03995 PF00753 Metallo-beta-lactamase superfamily R615_RS04000 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain R615_RS04000 PF00591 Glycosyl transferase family, a/b domain R615_RS04000 PF02885 Glycosyl transferase family, helical bundle domain R615_RS04030 PF00834 Ribulose-phosphate 3 epimerase family R615_RS04035 PF13419 Haloacid dehalogenase-like hydrolase R615_RS04040 PF02646 RmuC family R615_RS04045 PF00990 Diguanylate cyclase, GGDEF domain R615_RS04050 PF13649 Methyltransferase domain R615_RS04055 PF08003 Protein of unknown function (DUF1698) R615_RS04060 PF01207 Dihydrouridine synthase (Dus) R615_RS04065 PF04277 Oxaloacetate decarboxylase, gamma chain R615_RS04070 PF02436 Conserved carboxylase domain R615_RS04070 PF00682 HMGL-like R615_RS04070 PF00364 Biotin-requiring enzyme R615_RS04075 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit R615_RS04095 PF00958 GMP synthase C terminal domain R615_RS04095 PF00117 Glutamine amidotransferase class-I R615_RS04095 PF02540 NAD synthase R615_RS04100 PF12843 Putative quorum-sensing-regulated virulence factor R615_RS04105 PF00563 EAL domain R615_RS04105 PF13188 PAS domain R615_RS04105 PF03707 Bacterial signalling protein N terminal repeat R615_RS04105 PF00990 Diguanylate cyclase, GGDEF domain R615_RS04110 PF06865 Pyrimidine/purine nucleoside phosphorylase R615_RS04115 PF12343 Cold shock protein DEAD box A R615_RS04115 PF00271 Helicase conserved C-terminal domain R615_RS04115 PF00270 DEAD/DEAH box helicase R615_RS04115 PF03880 DbpA RNA binding domain R615_RS04125 PF03069 Acetamidase/Formamidase family R615_RS04130 PF10431 C-terminal, D2-small domain, of ClpB protein R615_RS04130 PF07724 AAA domain (Cdc48 subfamily) R615_RS04135 PF00795 Carbon-nitrogen hydrolase R615_RS04140 PF00005 ABC transporter R615_RS04145 PF00005 ABC transporter R615_RS04145 PF12399 Branched-chain amino acid ATP-binding cassette transporter R615_RS04165 PF00072 Response regulator receiver domain R615_RS04165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase R615_RS04165 PF18415 Histidine kinase receptor ArcB trans-membrane domain R615_RS04165 PF00989 PAS fold R615_RS04165 PF00512 His Kinase A (phospho-acceptor) domain R615_RS04165 PF01627 Hpt domain R615_RS04170 PF00072 Response regulator receiver domain R615_RS04170 PF00990 Diguanylate cyclase, GGDEF domain R615_RS04180 PF02798 Glutathione S-transferase, N-terminal domain R615_RS04185 PF02798 Glutathione S-transferase, N-terminal domain R615_RS04185 PF00043 Glutathione S-transferase, C-terminal domain R615_RS04195 PF12833 Helix-turn-helix domain R615_RS04200 PF06751 Ethanolamine ammonia lyase large subunit (EutB) R615_RS04205 PF05985 Ethanolamine ammonia-lyase light chain (EutC) R615_RS04210 PF13520 Amino acid permease R615_RS04225 PF00175 Oxidoreductase NAD-binding domain R615_RS04225 PF00111 2Fe-2S iron-sulfur cluster binding domain R615_RS04225 PF00970 Oxidoreductase FAD-binding domain R615_RS04230 PF00487 Fatty acid desaturase R615_RS04235 PF00580 UvrD/REP helicase N-terminal domain R615_RS04235 PF13361 UvrD-like helicase C-terminal domain R615_RS04240 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase R615_RS04250 PF08774 VRR-NUC domain R615_RS04250 PF18081 Fanconi anemia-associated nuclease SAP domain R615_RS04260 PF00682 HMGL-like R615_RS04260 PF08502 LeuA allosteric (dimerisation) domain R615_RS04265 PF01037 Lrp/AsnC ligand binding domain R615_RS04270 PF00512 His Kinase A (phospho-acceptor) domain R615_RS04270 PF08447 PAS fold R615_RS04270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase R615_RS04270 PF00989 PAS fold R615_RS04275 PF01253 Translation initiation factor SUI1 R615_RS04280 PF02525 Flavodoxin-like fold R615_RS04285 PF02254 TrkA-N domain R615_RS04285 PF00999 Sodium/hydrogen exchanger family R615_RS04295 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region R615_RS04300 PF01464 Transglycosylase SLT domain R615_RS04300 PF00497 Bacterial extracellular solute-binding proteins, family 3 R615_RS04305 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain R615_RS04305 PF02769 AIR synthase related protein, C-terminal domain R615_RS04305 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal R615_RS04325 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system R615_RS04340 PF13817 IS66 C-terminal element R615_RS04340 PF03050 Transposase IS66 family R615_RS04340 PF13005 zinc-finger binding domain of transposase IS66 R615_RS04340 PF13007 Transposase C of IS166 homeodomain R615_RS04360 PF01507 Phosphoadenosine phosphosulfate reductase family R615_RS04380 PF02690 Na+/Pi-cotransporter R615_RS04385 PF07690 Major Facilitator Superfamily R615_RS04390 PF00886 Ribosomal protein S16 R615_RS04395 PF01782 RimM N-terminal domain R615_RS04395 PF05239 PRC-barrel domain R615_RS04400 PF01746 tRNA (Guanine-1)-methyltransferase R615_RS04405 PF01245 Ribosomal protein L19 R615_RS04415 PF00849 RNA pseudouridylate synthase R615_RS04420 PF00561 alpha/beta hydrolase fold R615_RS04430 PF00999 Sodium/hydrogen exchanger family R615_RS04430 PF02254 TrkA-N domain R615_RS04440 PF13638 PIN domain R615_RS04440 PF02562 PhoH-like protein R615_RS04465 PF07992 Pyridine nucleotide-disulphide oxidoreductase R615_RS04475 PF01906 Putative heavy-metal-binding R615_RS04480 PF01906 Putative heavy-metal-binding R615_RS04485 PF09317 Domain of unknown function (DUF1974) R615_RS04485 PF02771 Acyl-CoA dehydrogenase, N-terminal domain R615_RS04485 PF00441 Acyl-CoA dehydrogenase, C-terminal domain R615_RS04485 PF02770 Acyl-CoA dehydrogenase, middle domain R615_RS04510 PF12146 Serine aminopeptidase, S33 R615_RS04540 PF01420 Type I restriction modification DNA specificity domain R615_RS04545 PF12161 HsdM N-terminal domain R615_RS04545 PF02384 N-6 DNA Methylase R615_RS04550 PF00271 Helicase conserved C-terminal domain R615_RS04550 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) R615_RS04550 PF08463 EcoEI R protein C-terminal R615_RS04550 PF04851 Type III restriction enzyme, res subunit R615_RS04575 PF13356 Arm DNA-binding domain R615_RS04575 PF00589 Phage integrase family R615_RS04600 PF13144 Chaperone for flagella basal body P-ring formation R615_RS04605 PF01584 CheW-like domain R615_RS04605 PF00072 Response regulator receiver domain R615_RS04610 PF01739 CheR methyltransferase, SAM binding domain R615_RS04610 PF03705 CheR methyltransferase, all-alpha domain R615_RS04615 PF00460 Flagella basal body rod protein R615_RS04620 PF06429 Flagellar basal body rod FlgEFG protein C-terminal R615_RS04620 PF00460 Flagella basal body rod protein R615_RS04625 PF03963 Flagellar hook capping protein - N-terminal region R615_RS04625 PF13861 FlgD Tudor-like domain R615_RS04625 PF13860 FlgD Ig-like domain R615_RS04630 PF06429 Flagellar basal body rod FlgEFG protein C-terminal R615_RS04630 PF00460 Flagella basal body rod protein R615_RS04630 PF07559 Flagellar basal body protein FlaE R615_RS04635 PF00460 Flagella basal body rod protein R615_RS04635 PF06429 Flagellar basal body rod FlgEFG protein C-terminal R615_RS04640 PF06429 Flagellar basal body rod FlgEFG protein C-terminal R615_RS04640 PF00460 Flagella basal body rod protein R615_RS04645 PF02107 Flagellar L-ring protein R615_RS04660 PF02119 Flagellar P-ring protein R615_RS04665 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase R615_RS04665 PF10135 Rod binding protein R615_RS04675 PF00669 Bacterial flagellin N-terminal helical region R615_RS04680 PF00149 Calcineurin-like phosphoesterase R615_RS04725 PF13439 Glycosyltransferase Family 4 R615_RS04725 PF00534 Glycosyl transferases group 1 R615_RS04730 PF03808 Glycosyl transferase WecB/TagA/CpsF family R615_RS04735 PF16363 GDP-mannose 4,6 dehydratase R615_RS04740 PF01370 NAD dependent epimerase/dehydratase family R615_RS04745 PF00293 NUDIX domain R615_RS04795 PF08676 MutL C terminal dimerisation domain R615_RS04795 PF01119 DNA mismatch repair protein, C-terminal domain R615_RS04805 PF01050 Mannose-6-phosphate isomerase R615_RS04805 PF00483 Nucleotidyl transferase R615_RS04810 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II R615_RS04810 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I R615_RS04810 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain R615_RS04810 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III R615_RS04835 PF16363 GDP-mannose 4,6 dehydratase R615_RS04840 PF00483 Nucleotidyl transferase R615_RS04845 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase R615_RS04850 PF04321 RmlD substrate binding domain R615_RS04855 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain R615_RS04855 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain R615_RS04855 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain R615_RS04860 PF00753 Metallo-beta-lactamase superfamily R615_RS04860 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain R615_RS04860 PF10996 Beta-Casp domain R615_RS04865 PF02397 Bacterial sugar transferase R615_RS04880 PF02563 Polysaccharide biosynthesis/export protein R615_RS04885 PF13614 AAA domain R615_RS04905 PF07195 Flagellar hook-associated protein 2 C-terminus R615_RS04905 PF02465 Flagellar hook-associated protein 2 N-terminus R615_RS04910 PF04324 BFD-like [2Fe-2S] binding domain R615_RS04915 PF00472 RF-1 domain R615_RS04915 PF03462 PCRF domain R615_RS04920 PF01336 OB-fold nucleic acid binding domain R615_RS04920 PF00152 tRNA synthetases class II (D, K and N) R615_RS04925 PF03167 Uracil DNA glycosylase superfamily R615_RS04930 PF17827 PrmC N-terminal domain R615_RS04930 PF05175 Methyltransferase small domain R615_RS04935 PF02561 Flagellar protein FliS R615_RS04940 PF02954 Bacterial regulatory protein, Fis family R615_RS04940 PF06490 Flagellar regulatory protein FleQ R615_RS04940 PF00158 Sigma-54 interaction domain R615_RS04950 PF00512 His Kinase A (phospho-acceptor) domain R615_RS04950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase R615_RS04950 PF13188 PAS domain R615_RS04955 PF00158 Sigma-54 interaction domain R615_RS04955 PF02954 Bacterial regulatory protein, Fis family R615_RS04955 PF00072 Response regulator receiver domain R615_RS04960 PF02049 Flagellar hook-basal body complex protein FliE R615_RS04965 PF08345 Flagellar M-ring protein C-terminal R615_RS04965 PF01514 Secretory protein of YscJ/FliF family R615_RS04970 PF14841 FliG middle domain R615_RS04970 PF14842 FliG N-terminal domain R615_RS04970 PF01706 FliG C-terminal domain R615_RS04980 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain R615_RS04980 PF18269 T3SS EscN ATPase C-terminal domain R615_RS04995 PF00072 Response regulator receiver domain R615_RS05000 PF01627 Hpt domain R615_RS05000 PF01584 CheW-like domain R615_RS05000 PF09078 CheY binding R615_RS05000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase R615_RS05000 PF02895 Signal transducing histidine kinase, homodimeric domain R615_RS05005 PF01584 CheW-like domain R615_RS05010 PF02203 Tar ligand binding domain homologue R615_RS05010 PF00672 HAMP domain R615_RS05010 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain R615_RS05015 PF01739 CheR methyltransferase, SAM binding domain R615_RS05015 PF03705 CheR methyltransferase, all-alpha domain R615_RS05020 PF03975 CheD chemotactic sensory transduction R615_RS05025 PF00072 Response regulator receiver domain R615_RS05025 PF01339 CheB methylesterase R615_RS05030 PF13466 STAS domain R615_RS05035 PF00072 Response regulator receiver domain R615_RS05055 PF02154 Flagellar motor switch protein FliM R615_RS05055 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term R615_RS05060 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term R615_RS05070 PF00813 FliP family R615_RS05075 PF01313 Bacterial export proteins, family 3 R615_RS05080 PF01311 Bacterial export proteins, family 1 R615_RS05085 PF01312 FlhB HrpN YscU SpaS Family R615_RS05095 PF00771 FHIPEP family R615_RS05100 PF00448 SRP54-type protein, GTPase domain R615_RS05105 PF10609 NUBPL iron-transfer P-loop NTPase R615_RS05110 PF04545 Sigma-70, region 4 R615_RS05110 PF04542 Sigma-70 region 2 R615_RS05110 PF04539 Sigma-70 region 3 R615_RS05115 PF00072 Response regulator receiver domain R615_RS05120 PF04344 Chemotaxis phosphatase, CheZ R615_RS05125 PF01627 Hpt domain R615_RS05125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase R615_RS05125 PF02895 Signal transducing histidine kinase, homodimeric domain R615_RS05125 PF01584 CheW-like domain R615_RS05125 PF00072 Response regulator receiver domain R615_RS05130 PF00072 Response regulator receiver domain R615_RS05130 PF01339 CheB methylesterase R615_RS05135 PF13614 AAA domain R615_RS05150 PF01584 CheW-like domain R615_RS05180 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term R615_RS05180 PF12833 Helix-turn-helix domain R615_RS05185 PF00578 AhpC/TSA family R615_RS05190 PF00111 2Fe-2S iron-sulfur cluster binding domain R615_RS05195 PF00268 Ribonucleotide reductase, small chain R615_RS05200 PF03477 ATP cone domain R615_RS05200 PF02867 Ribonucleotide reductase, barrel domain R615_RS05200 PF00317 Ribonucleotide reductase, all-alpha domain R615_RS05205 PF00072 Response regulator receiver domain R615_RS05205 PF00486 Transcriptional regulatory protein, C terminal R615_RS05210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase R615_RS05210 PF00512 His Kinase A (phospho-acceptor) domain R615_RS05210 PF00672 HAMP domain R615_RS05215 PF03466 LysR substrate binding domain R615_RS05215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family R615_RS05220 PF08447 PAS fold R615_RS05220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain R615_RS05225 PF02782 FGGY family of carbohydrate kinases, C-terminal domain R615_RS05225 PF00370 FGGY family of carbohydrate kinases, N-terminal domain R615_RS05230 PF00990 Diguanylate cyclase, GGDEF domain R615_RS05235 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain R615_RS05235 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain R615_RS05240 PF00202 Aminotransferase class-III R615_RS05245 PF18030 RimK PreATP-grasp domain R615_RS05245 PF08443 RimK-like ATP-grasp domain R615_RS05260 PF03466 LysR substrate binding domain R615_RS05260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family R615_RS05265 PF08659 KR domain R615_RS05265 PF14765 Polyketide synthase dehydratase R615_RS05265 PF00550 Phosphopantetheine attachment site R615_RS05265 PF02801 Beta-ketoacyl synthase, C-terminal domain R615_RS05265 PF16197 Ketoacyl-synthetase C-terminal extension R615_RS05265 PF00109 Beta-ketoacyl synthase, N-terminal domain R615_RS05265 PF08240 Alcohol dehydrogenase GroES-like domain R615_RS05265 PF00698 Acyl transferase domain R615_RS05275 PF06508 Queuosine biosynthesis protein QueC R615_RS05305 PF00270 DEAD/DEAH box helicase R615_RS05305 PF00271 Helicase conserved C-terminal domain R615_RS05310 PF02678 Pirin R615_RS05310 PF05726 Pirin C-terminal cupin domain R615_RS05315 PF01909 Nucleotidyltransferase domain R615_RS05315 PF01842 ACT domain R615_RS05315 PF08335 GlnD PII-uridylyltransferase R615_RS05315 PF01966 HD domain R615_RS05320 PF00557 Metallopeptidase family M24 R615_RS05325 PF00318 Ribosomal protein S2 R615_RS05330 PF00889 Elongation factor TS R615_RS05335 PF00696 Amino acid kinase family R615_RS05340 PF01765 Ribosome recycling factor R615_RS05345 PF01255 Putative undecaprenyl diphosphate synthase R615_RS05355 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase R615_RS05355 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain R615_RS05355 PF13288 DXP reductoisomerase C-terminal domain R615_RS05360 PF02163 Peptidase family M50 R615_RS05360 PF13180 PDZ domain R615_RS05360 PF17820 PDZ domain R615_RS05365 PF01103 Surface antigen R615_RS05365 PF07244 Surface antigen variable number repeat R615_RS05375 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD R615_RS05375 PF00132 Bacterial transferase hexapeptide (six repeats) R615_RS05380 PF07977 FabA-like domain R615_RS05385 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 R615_RS05385 PF00132 Bacterial transferase hexapeptide (six repeats) R615_RS05390 PF02684 Lipid-A-disaccharide synthetase R615_RS05395 PF01351 Ribonuclease HII R615_RS05410 PF00072 Response regulator receiver domain R615_RS05410 PF02954 Bacterial regulatory protein, Fis family R615_RS05410 PF00158 Sigma-54 interaction domain R615_RS05420 PF13188 PAS domain R615_RS05420 PF00072 Response regulator receiver domain R615_RS05420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase R615_RS05420 PF08448 PAS fold R615_RS05420 PF00512 His Kinase A (phospho-acceptor) domain R615_RS05430 PF00463 Isocitrate lyase family R615_RS05435 PF00042 Globin R615_RS05435 PF00970 Oxidoreductase FAD-binding domain R615_RS05435 PF00175 Oxidoreductase NAD-binding domain R615_RS05440 PF00487 Fatty acid desaturase R615_RS05445 PF02608 ABC transporter substrate-binding protein PnrA-like R615_RS05450 PF00962 Adenosine/AMP deaminase R615_RS05455 PF00378 Enoyl-CoA hydratase/isomerase R615_RS05460 PF02785 Biotin carboxylase C-terminal domain R615_RS05460 PF00289 Biotin carboxylase, N-terminal domain R615_RS05460 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain R615_RS05475 PF09084 NMT1/THI5 like R615_RS05480 PF00528 Binding-protein-dependent transport system inner membrane component R615_RS05485 PF00005 ABC transporter R615_RS05490 PF02633 Creatinine amidohydrolase R615_RS05495 PF00120 Glutamine synthetase, catalytic domain R615_RS05500 PF08753 NikR C terminal nickel binding domain R615_RS05500 PF01402 Ribbon-helix-helix protein, copG family R615_RS05505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family R615_RS05505 PF03466 LysR substrate binding domain R615_RS05510 PF00892 EamA-like transporter family R615_RS05520 PF00155 Aminotransferase class I and II R615_RS05525 PF03447 Homoserine dehydrogenase, NAD binding domain R615_RS05525 PF00742 Homoserine dehydrogenase R615_RS05525 PF01842 ACT domain R615_RS05535 PF03466 LysR substrate binding domain R615_RS05535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family R615_RS05545 PF00849 RNA pseudouridylate synthase R615_RS05545 PF01479 S4 domain R615_RS05550 PF01263 Aldose 1-epimerase R615_RS05555 PF03449 Transcription elongation factor, N-terminal R615_RS05555 PF01272 Transcription elongation factor, GreA/GreB, C-term R615_RS05565 PF06062 Uncharacterised protein family (UPF0231) R615_RS05570 PF00929 Exonuclease R615_RS05575 PF01979 Amidohydrolase family R615_RS05580 PF00691 OmpA family R615_RS05585 PF00764 Arginosuccinate synthase R615_RS05605 PF02463 RecF/RecN/SMC N terminal domain R615_RS05610 PF13361 UvrD-like helicase C-terminal domain R615_RS05610 PF00580 UvrD/REP helicase N-terminal domain R615_RS05645 PF00849 RNA pseudouridylate synthase R615_RS05675 PF01863 Protein of unknown function DUF45 R615_RS05685 PF01593 Flavin containing amine oxidoreductase R615_RS05690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family R615_RS05690 PF03466 LysR substrate binding domain R615_RS05695 PF00970 Oxidoreductase FAD-binding domain R615_RS05695 PF00175 Oxidoreductase NAD-binding domain R615_RS05705 PF02253 Phospholipase A1 R615_RS05715 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain R615_RS05715 PF00672 HAMP domain R615_RS05720 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily R615_RS05725 PF10576 Iron-sulfur binding domain of endonuclease III R615_RS05725 PF00730 HhH-GPD superfamily base excision DNA repair protein R615_RS05725 PF00633 Helix-hairpin-helix motif R615_RS05740 PF14602 Hexapeptide repeat of succinyl-transferase R615_RS05740 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle R615_RS05745 PF03960 ArsC family R615_RS05755 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain R615_RS05755 PF00672 HAMP domain R615_RS05760 PF02230 Phospholipase/Carboxylesterase R615_RS05770 PF01883 Iron-sulfur cluster assembly protein R615_RS05775 PF01521 Iron-sulphur cluster biosynthesis R615_RS05780 PF00266 Aminotransferase class-V R615_RS05785 PF01458 Uncharacterized protein family (UPF0051) R615_RS05790 PF00005 ABC transporter R615_RS05795 PF01458 Uncharacterized protein family (UPF0051) R615_RS05810 PF00899 ThiF family R615_RS05845 PF00255 Glutathione peroxidase R615_RS05850 PF02308 MgtC family R615_RS05855 PF00012 Hsp70 protein R615_RS05875 PF00672 HAMP domain R615_RS05875 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain R615_RS05885 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ R615_RS05895 PF03358 NADPH-dependent FMN reductase R615_RS05900 PF03960 ArsC family R615_RS05905 PF03631 Virulence factor BrkB R615_RS05935 PF01734 Patatin-like phospholipase R615_RS05940 PF05175 Methyltransferase small domain R615_RS05945 PF01264 Chorismate synthase R615_RS05965 PF00561 alpha/beta hydrolase fold R615_RS05965 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus R615_RS05975 PF06794 Uncharacterised protein family (UPF0270) R615_RS05980 PF05430 S-adenosyl-L-methionine-dependent methyltransferase R615_RS05980 PF01266 FAD dependent oxidoreductase R615_RS05990 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD R615_RS06005 PF03795 YCII-related domain R615_RS06010 PF04279 Intracellular septation protein A R615_RS06015 PF02811 PHP domain R615_RS06020 PF01300 Telomere recombination R615_RS06025 PF00579 tRNA synthetases class I (W and Y) R615_RS06030 PF00579 tRNA synthetases class I (W and Y) R615_RS06035 PF02616 Segregation and condensation protein ScpA R615_RS06045 PF00849 RNA pseudouridylate synthase R615_RS06045 PF01479 S4 domain R615_RS06050 PF00990 Diguanylate cyclase, GGDEF domain R615_RS06055 PF00106 short chain dehydrogenase R615_RS06060 PF13419 Haloacid dehalogenase-like hydrolase R615_RS06070 PF01979 Amidohydrolase family R615_RS06075 PF00521 DNA gyrase/topoisomerase IV, subunit A R615_RS06075 PF03989 DNA gyrase C-terminal domain, beta-propeller R615_RS06085 PF00266 Aminotransferase class-V R615_RS06090 PF01817 Chorismate mutase type II R615_RS06090 PF01842 ACT domain R615_RS06090 PF00800 Prephenate dehydratase R615_RS06095 PF00155 Aminotransferase class I and II R615_RS06100 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) R615_RS06105 PF02224 Cytidylate kinase R615_RS06110 PF00575 S1 RNA binding domain R615_RS06115 PF00216 Bacterial DNA-binding protein R615_RS06120 PF18073 Rubredoxin metal binding domain R615_RS06125 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family R615_RS06135 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain R615_RS06135 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain R615_RS06140 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain R615_RS06140 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain R615_RS06140 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain R615_RS06145 PF01408 Oxidoreductase family, NAD-binding Rossmann fold R615_RS06145 PF02894 Oxidoreductase family, C-terminal alpha/beta domain R615_RS06150 PF00132 Bacterial transferase hexapeptide (six repeats) R615_RS06155 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family R615_RS06170 PF02350 UDP-N-acetylglucosamine 2-epimerase R615_RS06180 PF00535 Glycosyl transferase family 2 R615_RS06185 PF16363 GDP-mannose 4,6 dehydratase R615_RS06190 PF00483 Nucleotidyl transferase R615_RS06195 PF05523 WxcM-like, C-terminal R615_RS06205 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family R615_RS06210 PF02397 Bacterial sugar transferase R615_RS06225 PF02719 Polysaccharide biosynthesis protein R615_RS06235 PF16363 GDP-mannose 4,6 dehydratase R615_RS06240 PF00692 dUTPase R615_RS06250 PF00551 Formyl transferase R615_RS06255 PF02769 AIR synthase related protein, C-terminal domain R615_RS06255 PF00586 AIR synthase related protein, N-terminal domain R615_RS06265 PF00308 Bacterial dnaA protein R615_RS06270 PF00155 Aminotransferase class I and II R615_RS06275 PF00271 Helicase conserved C-terminal domain R615_RS06275 PF02151 UvrB/uvrC motif R615_RS06275 PF12344 Ultra-violet resistance protein B R615_RS06275 PF17757 UvrB interaction domain R615_RS06275 PF04851 Type III restriction enzyme, res subunit R615_RS06280 PF02333 Phytase R615_RS06290 PF00360 Phytochrome region R615_RS06290 PF00990 Diguanylate cyclase, GGDEF domain R615_RS06290 PF01590 GAF domain R615_RS06290 PF00563 EAL domain R615_RS06295 PF12833 Helix-turn-helix domain R615_RS06295 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term R615_RS06310 PF02872 5'-nucleotidase, C-terminal domain R615_RS06310 PF00149 Calcineurin-like phosphoesterase R615_RS06315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase R615_RS06315 PF07730 Histidine kinase R615_RS06315 PF00672 HAMP domain R615_RS06320 PF00072 Response regulator receiver domain R615_RS06320 PF00196 Bacterial regulatory proteins, luxR family R615_RS06330 PF02384 N-6 DNA Methylase R615_RS06365 PF11867 Domain of unknown function (DUF3387) R615_RS06365 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) R615_RS06365 PF18766 SWI2/SNF2 ATPase R615_RS06390 PF02769 AIR synthase related protein, C-terminal domain R615_RS06390 PF00586 AIR synthase related protein, N-terminal domain R615_RS06405 PF00005 ABC transporter R615_RS06410 PF00528 Binding-protein-dependent transport system inner membrane component R615_RS06415 PF04116 Fatty acid hydroxylase superfamily R615_RS06420 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term R615_RS06420 PF12833 Helix-turn-helix domain R615_RS06440 PF00132 Bacterial transferase hexapeptide (six repeats) R615_RS06445 PF00550 Phosphopantetheine attachment site R615_RS06455 PF13193 AMP-binding enzyme C-terminal domain R615_RS06455 PF00501 AMP-binding enzyme R615_RS06460 PF00535 Glycosyl transferase family 2 R615_RS06465 PF00288 GHMP kinases N terminal domain R615_RS06465 PF08544 GHMP kinases C terminal R615_RS06480 PF00132 Bacterial transferase hexapeptide (six repeats) R615_RS06480 PF06426 Serine acetyltransferase, N-terminal R615_RS06520 PF00483 Nucleotidyl transferase R615_RS06525 PF08533 Beta-galactosidase C-terminal domain R615_RS06525 PF08532 Beta-galactosidase trimerisation domain R615_RS06525 PF02449 Beta-galactosidase R615_RS06530 PF13580 SIS domain R615_RS06550 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain R615_RS06550 PF03129 Anticodon binding domain R615_RS06550 PF02824 TGS domain R615_RS06550 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) R615_RS06555 PF00707 Translation initiation factor IF-3, C-terminal domain R615_RS06555 PF05198 Translation initiation factor IF-3, N-terminal domain R615_RS06560 PF01632 Ribosomal protein L35 R615_RS06565 PF00453 Ribosomal protein L20 R615_RS06570 PF01409 tRNA synthetases class II core domain (F) R615_RS06570 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain R615_RS06575 PF01588 Putative tRNA binding domain R615_RS06575 PF03147 Ferredoxin-fold anticodon binding domain R615_RS06575 PF03484 tRNA synthetase B5 domain R615_RS06575 PF03483 B3/4 domain R615_RS06575 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain R615_RS06580 PF00216 Bacterial DNA-binding protein R615_RS06620 PF14552 Tautomerase enzyme R615_RS06625 PF09905 DNA-binding protein VF530 R615_RS06665 PF00892 EamA-like transporter family R615_RS06670 PF12704 MacB-like periplasmic core domain R615_RS06670 PF02687 FtsX-like permease family R615_RS06670 PF00005 ABC transporter R615_RS06675 PF12704 MacB-like periplasmic core domain R615_RS06675 PF02687 FtsX-like permease family R615_RS06675 PF00005 ABC transporter R615_RS06680 PF00005 ABC transporter R615_RS06680 PF02687 FtsX-like permease family R615_RS06680 PF12704 MacB-like periplasmic core domain R615_RS06685 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion R615_RS06700 PF08242 Methyltransferase domain R615_RS06705 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) R615_RS06710 PF02222 ATP-grasp domain R615_RS06710 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain R615_RS06715 PF00731 AIR carboxylase R615_RS06725 PF13193 AMP-binding enzyme C-terminal domain R615_RS06725 PF00501 AMP-binding enzyme R615_RS06730 PF00441 Acyl-CoA dehydrogenase, C-terminal domain R615_RS06730 PF02770 Acyl-CoA dehydrogenase, middle domain R615_RS06730 PF02771 Acyl-CoA dehydrogenase, N-terminal domain R615_RS06735 PF00441 Acyl-CoA dehydrogenase, C-terminal domain R615_RS06735 PF02770 Acyl-CoA dehydrogenase, middle domain R615_RS06735 PF02771 Acyl-CoA dehydrogenase, N-terminal domain R615_RS06740 PF03883 Peroxide stress protein YaaA R615_RS06750 PF03572 Peptidase family S41 R615_RS06750 PF00595 PDZ domain R615_RS06750 PF17804 Tail specific protease N-terminal domain R615_RS06750 PF11818 C-terminal domain of tail specific protease (DUF3340) R615_RS06760 PF03466 LysR substrate binding domain R615_RS06760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family R615_RS06770 PF02861 Clp amino terminal domain, pathogenicity island component R615_RS06770 PF17871 AAA lid domain R615_RS06770 PF00004 ATPase family associated with various cellular activities (AAA) R615_RS06770 PF07724 AAA domain (Cdc48 subfamily) R615_RS06770 PF10431 C-terminal, D2-small domain, of ClpB protein R615_RS06780 PF02075 Crossover junction endodeoxyribonuclease RuvC R615_RS06785 PF01330 RuvA N terminal domain R615_RS06785 PF07499 RuvA, C-terminal domain R615_RS06790 PF17864 RuvB AAA lid domain R615_RS06790 PF05491 RuvB C-terminal winged helix domain R615_RS06790 PF05496 Holliday junction DNA helicase RuvB P-loop domain R615_RS06795 PF03061 Thioesterase superfamily R615_RS06800 PF01618 MotA/TolQ/ExbB proton channel family R615_RS06805 PF02472 Biopolymer transport protein ExbD/TolR R615_RS06815 PF04052 TolB amino-terminal domain R615_RS06815 PF07676 WD40-like Beta Propeller Repeat R615_RS06820 PF00691 OmpA family R615_RS06825 PF13525 Outer membrane lipoprotein R615_RS06825 PF16331 TolA binding protein trimerisation R615_RS06840 PF02445 Quinolinate synthetase A protein R615_RS06845 PF13181 Tetratricopeptide repeat R615_RS06845 PF01435 Peptidase family M48 R615_RS06855 PF01594 AI-2E family transporter R615_RS06860 PF00701 Dihydrodipicolinate synthetase family R615_RS06875 PF01259 SAICAR synthetase R615_RS06895 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase R615_RS06895 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase R615_RS06910 PF00483 Nucleotidyl transferase R615_RS06915 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain R615_RS06915 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain R615_RS06920 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase R615_RS06925 PF00920 Dehydratase family R615_RS06930 PF01081 KDPG and KHG aldolase R615_RS06935 PF00128 Alpha amylase, catalytic domain R615_RS06960 PF00485 Phosphoribulokinase / Uridine kinase family R615_RS06965 PF01817 Chorismate mutase type II R615_RS06965 PF00800 Prephenate dehydratase R615_RS06970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase R615_RS06970 PF00672 HAMP domain R615_RS06970 PF00512 His Kinase A (phospho-acceptor) domain R615_RS06970 PF00072 Response regulator receiver domain R615_RS06970 PF01627 Hpt domain R615_RS06970 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) R615_RS06975 PF12833 Helix-turn-helix domain R615_RS06990 PF00072 Response regulator receiver domain R615_RS07010 PF01964 Radical SAM ThiC family R615_RS07010 PF13667 ThiC-associated domain R615_RS07015 PF01266 FAD dependent oxidoreductase R615_RS07025 PF05690 Thiazole biosynthesis protein ThiG R615_RS07030 PF02581 Thiamine monophosphate synthase R615_RS07035 PF00183 Hsp90 protein R615_RS07060 PF01726 LexA DNA binding domain R615_RS07060 PF00717 Peptidase S24-like R615_RS07065 PF00440 Bacterial regulatory proteins, tetR family R615_RS07070 PF17969 L,D-transpeptidase C-terminal domain R615_RS07070 PF03734 L,D-transpeptidase catalytic domain R615_RS07075 PF00933 Glycosyl hydrolase family 3 N terminal domain R615_RS07080 PF01048 Phosphorylase superfamily R615_RS07100 PF00271 Helicase conserved C-terminal domain R615_RS07100 PF17757 UvrB interaction domain R615_RS07100 PF00270 DEAD/DEAH box helicase R615_RS07100 PF02559 CarD-like/TRCF domain R615_RS07100 PF03461 TRCF domain R615_RS07105 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain R615_RS07105 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain R615_RS07110 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) R615_RS07110 PF11973 NQRA C-terminal domain R615_RS07115 PF03116 NQR2, RnfD, RnfE family R615_RS07120 PF04205 FMN-binding domain R615_RS07125 PF02508 Rnf-Nqr subunit, membrane protein R615_RS07130 PF02508 Rnf-Nqr subunit, membrane protein R615_RS07135 PF00970 Oxidoreductase FAD-binding domain R615_RS07135 PF00111 2Fe-2S iron-sulfur cluster binding domain R615_RS07135 PF00175 Oxidoreductase NAD-binding domain R615_RS07145 PF00182 Chitinase class I R615_RS07150 PF00106 short chain dehydrogenase R615_RS07275 PF00004 ATPase family associated with various cellular activities (AAA) R615_RS07275 PF17862 AAA+ lid domain R615_RS07275 PF01434 Peptidase family M41 R615_RS07295 PF03435 Saccharopine dehydrogenase NADP binding domain R615_RS07300 PF01022 Bacterial regulatory protein, arsR family R615_RS07310 PF01758 Sodium Bile acid symporter family R615_RS07325 PF18327 Proline utilization A proline dehydrogenase N-terminal domain R615_RS07325 PF14850 DNA-binding domain of Proline dehydrogenase R615_RS07325 PF01619 Proline dehydrogenase R615_RS07325 PF00171 Aldehyde dehydrogenase family R615_RS07330 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase R615_RS07330 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase R615_RS07335 PF02810 SEC-C motif R615_RS07340 PF00271 Helicase conserved C-terminal domain R615_RS07340 PF00270 DEAD/DEAH box helicase R615_RS07345 PF07152 YaeQ protein R615_RS07365 PF03707 Bacterial signalling protein N terminal repeat R615_RS07365 PF00563 EAL domain R615_RS07365 PF00990 Diguanylate cyclase, GGDEF domain R615_RS07370 PF00487 Fatty acid desaturase R615_RS07375 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term R615_RS07375 PF12833 Helix-turn-helix domain R615_RS07380 PF13193 AMP-binding enzyme C-terminal domain R615_RS07380 PF00501 AMP-binding enzyme R615_RS07385 PF12806 Acetyl-CoA dehydrogenase C-terminal like R615_RS07385 PF02771 Acyl-CoA dehydrogenase, N-terminal domain R615_RS07385 PF00441 Acyl-CoA dehydrogenase, C-terminal domain R615_RS07385 PF02770 Acyl-CoA dehydrogenase, middle domain R615_RS07390 PF00672 HAMP domain R615_RS07390 PF01627 Hpt domain R615_RS07390 PF17149 Periplasmic sensor domain found in signal transduction proteins R615_RS07390 PF00072 Response regulator receiver domain R615_RS07390 PF00512 His Kinase A (phospho-acceptor) domain R615_RS07390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase R615_RS07395 PF03922 OmpW family R615_RS07400 PF00106 short chain dehydrogenase R615_RS07405 PF13396 Phospholipase_D-nuclease N-terminal R615_RS07405 PF13091 PLD-like domain R615_RS07410 PF01227 GTP cyclohydrolase I R615_RS07415 PF01177 Asp/Glu/Hydantoin racemase R615_RS07420 PF07694 5TMR of 5TMR-LYT R615_RS07420 PF00990 Diguanylate cyclase, GGDEF domain R615_RS07435 PF01740 STAS domain R615_RS07435 PF00916 Sulfate permease family R615_RS07440 PF01022 Bacterial regulatory protein, arsR family R615_RS07445 PF00753 Metallo-beta-lactamase superfamily R615_RS07455 PF01926 50S ribosome-binding GTPase R615_RS07470 PF01722 BolA-like protein R615_RS07475 PF01852 START domain R615_RS07500 PF00226 DnaJ domain R615_RS07500 PF01556 DnaJ C terminal domain R615_RS07500 PF00684 DnaJ central domain R615_RS07510 PF03449 Transcription elongation factor, N-terminal R615_RS07510 PF01272 Transcription elongation factor, GreA/GreB, C-term R615_RS07520 PF01171 PP-loop family R615_RS07530 PF00325 Bacterial regulatory proteins, crp family R615_RS07530 PF00027 Cyclic nucleotide-binding domain R615_RS07540 PF03597 Cytochrome oxidase maturation protein cbb3-type R615_RS07545 PF00403 Heavy-metal-associated domain R615_RS07555 PF13746 4Fe-4S dicluster domain R615_RS07555 PF12801 4Fe-4S binding domain R615_RS07555 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase R615_RS07560 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP R615_RS07560 PF13442 Cytochrome C oxidase, cbb3-type, subunit III R615_RS07575 PF00115 Cytochrome C and Quinol oxidase polypeptide I R615_RS07615 PF00109 Beta-ketoacyl synthase, N-terminal domain R615_RS07615 PF02801 Beta-ketoacyl synthase, C-terminal domain R615_RS07630 PF00990 Diguanylate cyclase, GGDEF domain R615_RS07630 PF03707 Bacterial signalling protein N terminal repeat R615_RS07630 PF00563 EAL domain R615_RS07640 PF04055 Radical SAM superfamily R615_RS07640 PF18693 TRAM domain R615_RS07640 PF00919 Uncharacterized protein family UPF0004 R615_RS07645 PF00072 Response regulator receiver domain R615_RS07645 PF00990 Diguanylate cyclase, GGDEF domain R615_RS07665 PF08443 RimK-like ATP-grasp domain R615_RS07665 PF18030 RimK PreATP-grasp domain R615_RS07690 PF00753 Metallo-beta-lactamase superfamily R615_RS07690 PF16123 Hydroxyacylglutathione hydrolase C-terminus R615_RS07700 PF00106 short chain dehydrogenase R615_RS07705 PF02938 GAD domain R615_RS07705 PF01336 OB-fold nucleic acid binding domain R615_RS07705 PF00152 tRNA synthetases class II (D, K and N) R615_RS07725 PF07690 Major Facilitator Superfamily R615_RS07735 PF00106 short chain dehydrogenase R615_RS07735 PF00561 alpha/beta hydrolase fold R615_RS07745 PF00330 Aconitase family (aconitate hydratase) R615_RS07745 PF00694 Aconitase C-terminal domain R615_RS07760 PF02661 Fic/DOC family R615_RS07760 PF12728 Helix-turn-helix domain R615_RS07785 PF00330 Aconitase family (aconitate hydratase) R615_RS07785 PF11791 Aconitate B N-terminal domain R615_RS07785 PF06434 Aconitate hydratase 2 N-terminus R615_RS07795 PF04879 Molybdopterin oxidoreductase Fe4S4 domain R615_RS07795 PF01568 Molydopterin dinucleotide binding domain R615_RS07795 PF00384 Molybdopterin oxidoreductase R615_RS07800 PF11890 Domain of unknown function (DUF3410) R615_RS07800 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain R615_RS07800 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain R615_RS07810 PF00155 Aminotransferase class I and II R615_RS07815 PF01641 SelR domain R615_RS07820 PF00255 Glutathione peroxidase R615_RS07825 PF01047 MarR family R615_RS07860 PF00005 ABC transporter R615_RS07865 PF01061 ABC-2 type transporter R615_RS07870 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term R615_RS07870 PF14489 QueF-like protein R615_RS07875 PF00211 Adenylate and Guanylate cyclase catalytic domain R615_RS07875 PF00072 Response regulator receiver domain R615_RS07890 PF00672 HAMP domain R615_RS07890 PF00072 Response regulator receiver domain R615_RS07890 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) R615_RS07890 PF00512 His Kinase A (phospho-acceptor) domain R615_RS07890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase R615_RS07890 PF01627 Hpt domain R615_RS07895 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term R615_RS07895 PF12833 Helix-turn-helix domain R615_RS07910 PF00672 HAMP domain R615_RS07910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain R615_RS07910 PF17200 Single Cache domain 2 R615_RS07915 PF00749 tRNA synthetases class I (E and Q), catalytic domain R615_RS07935 PF01370 NAD dependent epimerase/dehydratase family R615_RS07940 PF02348 Cytidylyltransferase R615_RS07955 PF08007 Cupin superfamily protein R615_RS07960 PF08328 Adenylosuccinate lyase C-terminal R615_RS07960 PF00206 Lyase R615_RS07985 PF01274 Malate synthase R615_RS08010 PF13307 Helicase C-terminal domain R615_RS08010 PF06733 DEAD_2 R615_RS08015 PF00561 alpha/beta hydrolase fold R615_RS08025 PF12704 MacB-like periplasmic core domain R615_RS08025 PF02687 FtsX-like permease family R615_RS08030 PF00005 ABC transporter R615_RS08040 PF03772 Competence protein R615_RS08040 PF00753 Metallo-beta-lactamase superfamily R615_RS08045 PF01618 MotA/TolQ/ExbB proton channel family R615_RS08050 PF02472 Biopolymer transport protein ExbD/TolR R615_RS08055 PF00664 ABC transporter transmembrane region R615_RS08055 PF00005 ABC transporter R615_RS08060 PF02606 Tetraacyldisaccharide-1-P 4'-kinase R615_RS08065 PF03966 Trm112p-like protein R615_RS08070 PF01451 Low molecular weight phosphotyrosine protein phosphatase R615_RS08075 PF01565 FAD binding domain R615_RS08075 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain R615_RS08080 PF00149 Calcineurin-like phosphoesterase R615_RS08085 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD R615_RS08090 PF00749 tRNA synthetases class I (E and Q), catalytic domain R615_RS08090 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain R615_RS08095 PF09190 DALR domain R615_RS08095 PF01406 tRNA synthetases class I (C) catalytic domain R615_RS08115 PF03458 UPF0126 domain R615_RS08125 PF03543 Yersinia/Haemophilus virulence surface antigen R615_RS08135 PF07995 Glucose / Sorbosone dehydrogenase R615_RS08140 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain R615_RS08140 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain R615_RS08160 PF05698 Bacterial trigger factor protein (TF) C-terminus R615_RS08160 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase R615_RS08160 PF05697 Bacterial trigger factor protein (TF) R615_RS08165 PF00574 Clp protease R615_RS08170 PF07724 AAA domain (Cdc48 subfamily) R615_RS08170 PF06689 ClpX C4-type zinc finger R615_RS08170 PF10431 C-terminal, D2-small domain, of ClpB protein R615_RS08175 PF00004 ATPase family associated with various cellular activities (AAA) R615_RS08175 PF02190 ATP-dependent protease La (LON) substrate-binding domain R615_RS08175 PF05362 Lon protease (S16) C-terminal proteolytic domain R615_RS08180 PF00216 Bacterial DNA-binding protein R615_RS08190 PF09312 SurA N-terminal domain R615_RS08190 PF00639 PPIC-type PPIASE domain R615_RS08205 PF01464 Transglycosylase SLT domain R615_RS08205 PF01476 LysM domain R615_RS08215 PF00075 RNase H R615_RS08220 PF00929 Exonuclease R615_RS08225 PF06450 Bacterial Na+/H+ antiporter B (NhaB) R615_RS08245 PF01343 Peptidase family S49 R615_RS08245 PF08496 Peptidase family S49 N-terminal R615_RS08250 PF08240 Alcohol dehydrogenase GroES-like domain R615_RS08250 PF00107 Zinc-binding dehydrogenase R615_RS08255 PF00999 Sodium/hydrogen exchanger family R615_RS08255 PF02254 TrkA-N domain R615_RS08265 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain R615_RS08265 PF01077 Nitrite and sulphite reductase 4Fe-4S domain R615_RS08270 PF03009 Glycerophosphoryl diester phosphodiesterase family R615_RS08275 PF01554 MatE R615_RS08280 PF02965 Vitamin B12 dependent methionine synthase, activation domain R615_RS08280 PF00809 Pterin binding enzyme R615_RS08280 PF02574 Homocysteine S-methyltransferase R615_RS08280 PF02310 B12 binding domain R615_RS08280 PF02607 B12 binding domain R615_RS08285 PF01106 NifU-like domain R615_RS08285 PF01521 Iron-sulphur cluster biosynthesis R615_RS08295 PF00072 Response regulator receiver domain R615_RS08305 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus R615_RS08305 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus R615_RS08315 PF00300 Histidine phosphatase superfamily (branch 1) R615_RS08335 PF00849 RNA pseudouridylate synthase R615_RS08340 PF16325 Peptidase family U32 C-terminal domain R615_RS08340 PF01136 Peptidase family U32 R615_RS08350 PF05175 Methyltransferase small domain R615_RS08375 PF02424 ApbE family R615_RS08385 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain R615_RS08385 PF07992 Pyridine nucleotide-disulphide oxidoreductase R615_RS08400 PF00923 Transaldolase/Fructose-6-phosphate aldolase R615_RS08405 PF00581 Rhodanese-like domain R615_RS08410 PF01207 Dihydrouridine synthase (Dus) R615_RS08415 PF04356 Protein of unknown function (DUF489) R615_RS08425 PF00293 NUDIX domain R615_RS08430 PF00849 RNA pseudouridylate synthase R615_RS08435 PF03971 Monomeric isocitrate dehydrogenase R615_RS08440 PF00313 'Cold-shock' DNA-binding domain R615_RS08445 PF02617 ATP-dependent Clp protease adaptor protein ClpS R615_RS08450 PF00004 ATPase family associated with various cellular activities (AAA) R615_RS08450 PF07724 AAA domain (Cdc48 subfamily) R615_RS08450 PF10431 C-terminal, D2-small domain, of ClpB protein R615_RS08450 PF02861 Clp amino terminal domain, pathogenicity island component R615_RS08450 PF17871 AAA lid domain R615_RS08455 PF01176 Translation initiation factor 1A / IF-1 R615_RS08460 PF04377 Arginine-tRNA-protein transferase, C terminus R615_RS08460 PF04376 Arginine-tRNA-protein transferase, N terminus R615_RS08465 PF03588 Leucyl/phenylalanyl-tRNA protein transferase R615_RS08470 PF13491 4TM region of DNA translocase FtsK/SpoIIIE R615_RS08470 PF09397 Ftsk gamma domain R615_RS08470 PF17854 FtsK alpha domain R615_RS08470 PF01580 FtsK/SpoIIIE family R615_RS08475 PF03548 Outer membrane lipoprotein carrier protein LolA R615_RS08480 PF16193 AAA C-terminal domain R615_RS08480 PF00004 ATPase family associated with various cellular activities (AAA) R615_RS08480 PF12002 MgsA AAA+ ATPase C terminal R615_RS08485 PF02537 CrcB-like protein, Camphor Resistance (CrcB) R615_RS08490 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) R615_RS08490 PF02403 Seryl-tRNA synthetase N-terminal domain R615_RS08495 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases R615_RS08495 PF10414 Sirohaem synthase dimerisation region R615_RS08495 PF14824 Sirohaem biosynthesis protein central R615_RS08500 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain R615_RS08500 PF00672 HAMP domain R615_RS08505 PF02885 Glycosyl transferase family, helical bundle domain R615_RS08505 PF00591 Glycosyl transferase family, a/b domain R615_RS08510 PF04358 DsrC like protein R615_RS08520 PF02635 DsrE/DsrF-like family R615_RS08525 PF02635 DsrE/DsrF-like family R615_RS08535 PF00850 Histone deacetylase domain R615_RS08540 PF00583 Acetyltransferase (GNAT) family R615_RS08540 PF13380 CoA binding domain R615_RS08540 PF13607 Succinyl-CoA ligase like flavodoxin domain R615_RS08545 PF00072 Response regulator receiver domain R615_RS08545 PF00196 Bacterial regulatory proteins, luxR family R615_RS08550 PF01541 GIY-YIG catalytic domain R615_RS08550 PF08459 UvrC Helix-hairpin-helix N-terminal R615_RS08550 PF02151 UvrB/uvrC motif R615_RS08555 PF01066 CDP-alcohol phosphatidyltransferase R615_RS08595 PF01012 Electron transfer flavoprotein domain R615_RS08600 PF00766 Electron transfer flavoprotein FAD-binding domain R615_RS08600 PF01012 Electron transfer flavoprotein domain R615_RS08605 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain R615_RS08605 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain R615_RS08605 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain R615_RS08610 PF00437 Type II/IV secretion system protein R615_RS08615 PF00482 Type II secretion system (T2SS), protein F R615_RS08620 PF08334 Type II secretion system (T2SS), protein G R615_RS08620 PF07963 Prokaryotic N-terminal methylation motif R615_RS08640 PF03934 Type II secretion system (T2SS), protein K R615_RS08655 PF07992 Pyridine nucleotide-disulphide oxidoreductase R615_RS08655 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain R615_RS08660 PF12137 RNA polymerase recycling family C-terminal R615_RS08660 PF18339 RapA N-terminal Tudor like domain 1 R615_RS08660 PF00176 SNF2 family N-terminal domain R615_RS08660 PF18337 RapA N-terminal Tudor like domain R615_RS08660 PF00271 Helicase conserved C-terminal domain R615_RS08665 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain R615_RS08665 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III R615_RS08665 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II R615_RS08665 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I R615_RS08670 PF03976 Polyphosphate kinase 2 (PPK2) R615_RS08675 PF01526 Tn3 transposase DDE domain R615_RS08675 PF13700 Domain of unknown function (DUF4158) R615_RS08680 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal R615_RS08680 PF00355 Rieske [2Fe-2S] domain R615_RS08685 PF11897 Protein of unknown function (DUF3417) R615_RS08685 PF00343 Carbohydrate phosphorylase R615_RS08720 PF00403 Heavy-metal-associated domain R615_RS08765 PF05275 Copper resistance protein B precursor (CopB) R615_RS08770 PF00394 Multicopper oxidase R615_RS08770 PF07732 Multicopper oxidase R615_RS08770 PF07731 Multicopper oxidase R615_RS08775 PF00486 Transcriptional regulatory protein, C terminal R615_RS08775 PF00072 Response regulator receiver domain R615_RS08780 PF00672 HAMP domain R615_RS08780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase R615_RS08780 PF00512 His Kinase A (phospho-acceptor) domain R615_RS08805 PF00873 AcrB/AcrD/AcrF family R615_RS08810 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion R615_RS08810 PF00529 HlyD membrane-fusion protein of T1SS R615_RS08845 PF00330 Aconitase family (aconitate hydratase) R615_RS08845 PF00694 Aconitase C-terminal domain R615_RS08865 PF00873 AcrB/AcrD/AcrF family R615_RS08870 PF00231 ATP synthase R615_RS08875 PF13700 Domain of unknown function (DUF4158) R615_RS08875 PF01526 Tn3 transposase DDE domain R615_RS08885 PF00376 MerR family regulatory protein R615_RS08885 PF09278 MerR, DNA binding R615_RS08890 PF02411 MerT mercuric transport protein R615_RS08895 PF00403 Heavy-metal-associated domain R615_RS08900 PF03239 Iron permease FTR1 family R615_RS08905 PF13411 MerR HTH family regulatory protein R615_RS08910 PF01545 Cation efflux family R615_RS08930 PF00873 AcrB/AcrD/AcrF family R615_RS08940 PF01545 Cation efflux family R615_RS08945 PF02694 Uncharacterised BCR, YnfA/UPF0060 family R615_RS08955 PF01545 Cation efflux family R615_RS08960 PF02583 Metal-sensitive transcriptional repressor R615_RS08970 PF00106 short chain dehydrogenase R615_RS08975 PF02568 Thiamine biosynthesis protein (ThiI) R615_RS08975 PF02926 THUMP domain R615_RS08990 PF03372 Endonuclease/Exonuclease/phosphatase family R615_RS09010 PF02472 Biopolymer transport protein ExbD/TolR R615_RS09015 PF01618 MotA/TolQ/ExbB proton channel family R615_RS09020 PF01618 MotA/TolQ/ExbB proton channel family R615_RS09030 PF08367 Peptidase M16C associated R615_RS09030 PF05193 Peptidase M16 inactive domain R615_RS09030 PF00675 Insulinase (Peptidase family M16) R615_RS09035 PF00266 Aminotransferase class-V R615_RS09050 PF12796 Ankyrin repeats (3 copies) R615_RS09070 PF09115 DNA polymerase III, delta subunit, C terminal R615_RS09075 PF02223 Thymidylate kinase R615_RS09080 PF02618 YceG-like family R615_RS09085 PF01063 Amino-transferase class IV R615_RS09090 PF00550 Phosphopantetheine attachment site R615_RS09100 PF00698 Acyl transferase domain R615_RS09105 PF02504 Fatty acid synthesis protein R615_RS09110 PF01783 Ribosomal L32p protein family R615_RS09120 PF01343 Peptidase family S49 R615_RS09125 PF13419 Haloacid dehalogenase-like hydrolase R615_RS09130 PF01479 S4 domain R615_RS09130 PF00849 RNA pseudouridylate synthase R615_RS09135 PF00575 S1 RNA binding domain R615_RS09135 PF10150 Ribonuclease E/G family R615_RS09135 PF12111 Polyribonucleotide phosphorylase C terminal R615_RS09140 PF04303 PrpF protein R615_RS09150 PF00694 Aconitase C-terminal domain R615_RS09150 PF00330 Aconitase family (aconitate hydratase) R615_RS09155 PF00285 Citrate synthase, C-terminal domain R615_RS09165 PF07729 FCD domain R615_RS09165 PF00392 Bacterial regulatory proteins, gntR family R615_RS09170 PF05430 S-adenosyl-L-methionine-dependent methyltransferase R615_RS09170 PF01266 FAD dependent oxidoreductase R615_RS09175 PF03737 Aldolase/RraA R615_RS09190 PF02896 PEP-utilising enzyme, TIM barrel domain R615_RS09190 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain R615_RS09190 PF00391 PEP-utilising enzyme, mobile domain R615_RS09195 PF03618 Kinase/pyrophosphorylase R615_RS09230 PF04715 Anthranilate synthase component I, N terminal region R615_RS09230 PF00425 chorismate binding enzyme R615_RS09240 PF01507 Phosphoadenosine phosphosulfate reductase family R615_RS09245 PF03466 LysR substrate binding domain R615_RS09245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family R615_RS09250 PF01925 Sulfite exporter TauE/SafE R615_RS09255 PF00793 DAHP synthetase I family R615_RS09260 PF04333 MlaA lipoprotein R615_RS09270 PF05114 Protein of unknown function (DUF692) R615_RS09280 PF11898 Domain of unknown function (DUF3418) R615_RS09280 PF00271 Helicase conserved C-terminal domain R615_RS09280 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold R615_RS09280 PF04408 Helicase associated domain (HA2) R615_RS09280 PF00270 DEAD/DEAH box helicase R615_RS09285 PF13193 AMP-binding enzyme C-terminal domain R615_RS09285 PF00501 AMP-binding enzyme R615_RS09290 PF01575 MaoC like domain R615_RS09380 PF03692 Putative zinc- or iron-chelating domain R615_RS09385 PF05166 YcgL domain R615_RS09390 PF00570 HRDC domain R615_RS09390 PF01612 3'-5' exonuclease R615_RS09395 PF13662 Toprim domain R615_RS09395 PF02132 RecR protein R615_RS09400 PF02575 YbaB/EbfC DNA-binding family R615_RS09425 PF00072 Response regulator receiver domain R615_RS09425 PF01627 Hpt domain R615_RS09425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase R615_RS09425 PF00512 His Kinase A (phospho-acceptor) domain R615_RS09450 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) R615_RS09460 PF01367 5'-3' exonuclease, C-terminal SAM fold R615_RS09460 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain R615_RS09465 PF00005 ABC transporter R615_RS09465 PF00664 ABC transporter transmembrane region R615_RS09490 PF00271 Helicase conserved C-terminal domain R615_RS09490 PF00270 DEAD/DEAH box helicase R615_RS09495 PF04315 Elongation factor P hydroxylase R615_RS09500 PF01554 MatE R615_RS09510 PF07722 Peptidase C26 R615_RS09520 PF00171 Aldehyde dehydrogenase family R615_RS09565 PF00248 Aldo/keto reductase family R615_RS09570 PF17200 Single Cache domain 2 R615_RS09570 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain R615_RS09570 PF00672 HAMP domain R615_RS09585 PF13559 Domain of unknown function (DUF4129) R615_RS09585 PF01841 Transglutaminase-like superfamily R615_RS09585 PF11992 Domain of unknown function (DUF3488) R615_RS09595 PF07726 ATPase family associated with various cellular activities (AAA) R615_RS09595 PF17863 AAA lid domain R615_RS09600 PF01053 Cys/Met metabolism PLP-dependent enzyme R615_RS09605 PF00156 Phosphoribosyl transferase domain R615_RS09610 PF02674 Colicin V production protein R615_RS09620 PF02875 Mur ligase family, glutamate ligase domain R615_RS09620 PF08245 Mur ligase middle domain R615_RS09625 PF00290 Tryptophan synthase alpha chain R615_RS09630 PF00291 Pyridoxal-phosphate dependent enzyme R615_RS09635 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase R615_RS09650 PF01416 tRNA pseudouridine synthase R615_RS09660 PF02774 Semialdehyde dehydrogenase, dimerisation domain R615_RS09660 PF01118 Semialdehyde dehydrogenase, NAD binding domain R615_RS09665 PF00180 Isocitrate/isopropylmalate dehydrogenase R615_RS09670 PF00694 Aconitase C-terminal domain R615_RS09675 PF00330 Aconitase family (aconitate hydratase) R615_RS09680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family R615_RS09685 PF00582 Universal stress protein family R615_RS09690 PF01515 Phosphate acetyl/butaryl transferase R615_RS09695 PF01546 Peptidase family M20/M25/M40 R615_RS09695 PF07687 Peptidase dimerisation domain R615_RS09700 PF00202 Aminotransferase class-III R615_RS09705 PF00557 Metallopeptidase family M24 R615_RS09705 PF01321 Creatinase/Prolidase N-terminal domain R615_RS09710 PF00171 Aldehyde dehydrogenase family R615_RS09715 PF03358 NADPH-dependent FMN reductase R615_RS09720 PF13193 AMP-binding enzyme C-terminal domain R615_RS09720 PF00501 AMP-binding enzyme R615_RS09720 PF16177 Acetyl-coenzyme A synthetase N-terminus R615_RS09730 PF00582 Universal stress protein family R615_RS09735 PF13333 Integrase core domain R615_RS09735 PF00665 Integrase core domain R615_RS09735 PF13276 HTH-like domain R615_RS09750 PF01545 Cation efflux family R615_RS09750 PF16916 Dimerisation domain of Zinc Transporter R615_RS09770 PF00549 CoA-ligase R615_RS09770 PF02629 CoA binding domain R615_RS09775 PF08442 ATP-grasp domain R615_RS09775 PF00549 CoA-ligase R615_RS09780 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain R615_RS09780 PF07992 Pyridine nucleotide-disulphide oxidoreductase R615_RS09785 PF02817 e3 binding domain R615_RS09785 PF00364 Biotin-requiring enzyme R615_RS09785 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) R615_RS09790 PF16870 2-oxoglutarate dehydrogenase C-terminal R615_RS09790 PF16078 2-oxoglutarate dehydrogenase N-terminus R615_RS09790 PF00676 Dehydrogenase E1 component R615_RS09790 PF02779 Transketolase, pyrimidine binding domain R615_RS09795 PF13085 2Fe-2S iron-sulfur cluster binding domain R615_RS09800 PF00890 FAD binding domain R615_RS09800 PF02910 Fumarate reductase flavoprotein C-term R615_RS09805 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit R615_RS09810 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit R615_RS09815 PF00285 Citrate synthase, C-terminal domain R615_RS09820 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase R615_RS09820 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase R615_RS09830 PF00072 Response regulator receiver domain R615_RS09830 PF01584 CheW-like domain R615_RS09835 PF00563 EAL domain R615_RS09835 PF08668 HDOD domain R615_RS09840 PF16901 C-terminal domain of alpha-glycerophosphate oxidase R615_RS09840 PF01266 FAD dependent oxidoreductase R615_RS09850 PF01075 Glycosyltransferase family 9 (heptosyltransferase) R615_RS09860 PF00535 Glycosyl transferase family 2 R615_RS09865 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase R615_RS09875 PF00109 Beta-ketoacyl synthase, N-terminal domain R615_RS09875 PF02801 Beta-ketoacyl synthase, C-terminal domain R615_RS09880 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain R615_RS09880 PF02785 Biotin carboxylase C-terminal domain R615_RS09880 PF00289 Biotin carboxylase, N-terminal domain R615_RS09890 PF13538 UvrD-like helicase C-terminal domain R615_RS09895 PF12705 PD-(D/E)XK nuclease superfamily R615_RS09895 PF00580 UvrD/REP helicase N-terminal domain R615_RS09895 PF13361 UvrD-like helicase C-terminal domain R615_RS09900 PF17946 RecC C-terminal domain R615_RS09920 PF08719 Domain of unknown function (DUF1768) R615_RS09935 PF18318 Glutamine synthetase C-terminal domain R615_RS09935 PF00120 Glutamine synthetase, catalytic domain R615_RS09935 PF12437 Glutamine synthetase type III N terminal R615_RS09940 PF01262 Alanine dehydrogenase/PNT, C-terminal domain R615_RS09940 PF05222 Alanine dehydrogenase/PNT, N-terminal domain R615_RS09950 PF07715 TonB-dependent Receptor Plug Domain R615_RS09950 PF00593 TonB dependent receptor R615_RS09975 PF08497 Radical SAM N-terminal R615_RS09975 PF11842 Domain of unknown function (DUF3362) R615_RS09975 PF04055 Radical SAM superfamily R615_RS09980 PF08376 Nitrate and nitrite sensing R615_RS09980 PF03861 ANTAR domain R615_RS09985 PF00005 ABC transporter R615_RS09995 PF00528 Binding-protein-dependent transport system inner membrane component R615_RS10000 PF00005 ABC transporter R615_RS10010 PF04324 BFD-like [2Fe-2S] binding domain R615_RS10010 PF07992 Pyridine nucleotide-disulphide oxidoreductase R615_RS10010 PF18267 Rubredoxin NAD+ reductase C-terminal domain R615_RS10010 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain R615_RS10010 PF01077 Nitrite and sulphite reductase 4Fe-4S domain R615_RS10015 PF03793 PASTA domain R615_RS10015 PF00069 Protein kinase domain R615_RS10020 PF07690 Major Facilitator Superfamily R615_RS10025 PF13806 Rieske-like [2Fe-2S] domain R615_RS10030 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain R615_RS10030 PF07992 Pyridine nucleotide-disulphide oxidoreductase R615_RS10030 PF01077 Nitrite and sulphite reductase 4Fe-4S domain R615_RS10030 PF04324 BFD-like [2Fe-2S] binding domain R615_RS10030 PF18267 Rubredoxin NAD+ reductase C-terminal domain R615_RS10035 PF01568 Molydopterin dinucleotide binding domain R615_RS10035 PF04324 BFD-like [2Fe-2S] binding domain R615_RS10035 PF00384 Molybdopterin oxidoreductase R615_RS10035 PF04879 Molybdopterin oxidoreductase Fe4S4 domain R615_RS10040 PF10414 Sirohaem synthase dimerisation region R615_RS10040 PF14824 Sirohaem biosynthesis protein central R615_RS10040 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases R615_RS10060 PF05016 ParE toxin of type II toxin-antitoxin system, parDE R615_RS10065 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH R615_RS10105 PF03352 Methyladenine glycosylase R615_RS10115 PF03129 Anticodon binding domain R615_RS10115 PF04073 Aminoacyl-tRNA editing domain R615_RS10115 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) R615_RS10120 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain R615_RS10120 PF01464 Transglycosylase SLT domain R615_RS10130 PF00990 Diguanylate cyclase, GGDEF domain R615_RS10130 PF17151 Periplasmic sensor domain R615_RS10140 PF02233 NAD(P) transhydrogenase beta subunit R615_RS10145 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch R615_RS10150 PF05222 Alanine dehydrogenase/PNT, N-terminal domain R615_RS10150 PF01262 Alanine dehydrogenase/PNT, C-terminal domain R615_RS10155 PF06039 Malate:quinone oxidoreductase (Mqo) R615_RS10160 PF00196 Bacterial regulatory proteins, luxR family R615_RS10165 PF00487 Fatty acid desaturase R615_RS10170 PF00301 Rubredoxin R615_RS10175 PF00171 Aldehyde dehydrogenase family R615_RS10180 PF00732 GMC oxidoreductase R615_RS10180 PF05199 GMC oxidoreductase R615_RS10185 PF01479 S4 domain R615_RS10185 PF00849 RNA pseudouridylate synthase R615_RS10215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase R615_RS10215 PF00672 HAMP domain R615_RS10215 PF16527 Two-component sensor protein CpxA, periplasmic domain R615_RS10215 PF00512 His Kinase A (phospho-acceptor) domain R615_RS10220 PF07992 Pyridine nucleotide-disulphide oxidoreductase R615_RS10220 PF00724 NADH:flavin oxidoreductase / NADH oxidase family R615_RS10225 PF10609 NUBPL iron-transfer P-loop NTPase R615_RS10230 PF02386 Cation transport protein R615_RS10240 PF00005 ABC transporter R615_RS10240 PF08352 Oligopeptide/dipeptide transporter, C-terminal region R615_RS10245 PF12911 N-terminal TM domain of oligopeptide transport permease C R615_RS10245 PF00528 Binding-protein-dependent transport system inner membrane component R615_RS10250 PF00528 Binding-protein-dependent transport system inner membrane component R615_RS10255 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle R615_RS10260 PF00690 Cation transporter/ATPase, N-terminus R615_RS10260 PF00689 Cation transporting ATPase, C-terminus R615_RS10265 PF02508 Rnf-Nqr subunit, membrane protein R615_RS10270 PF04060 Putative Fe-S cluster R615_RS10275 PF10531 SLBB domain R615_RS10275 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit R615_RS10275 PF12838 4Fe-4S dicluster domain R615_RS10275 PF13375 RnfC Barrel sandwich hybrid domain R615_RS10280 PF03116 NQR2, RnfD, RnfE family R615_RS10285 PF04205 FMN-binding domain R615_RS10290 PF02508 Rnf-Nqr subunit, membrane protein R615_RS10300 PF17773 UPF0176 acylphosphatase like domain R615_RS10300 PF00581 Rhodanese-like domain R615_RS10345 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain R615_RS10345 PF00672 HAMP domain R615_RS10350 PF01527 Transposase R615_RS10355 PF00665 Integrase core domain R615_RS10355 PF13333 Integrase core domain R615_RS10355 PF13276 HTH-like domain R615_RS10390 PF13276 HTH-like domain R615_RS10390 PF13333 Integrase core domain R615_RS10390 PF00665 Integrase core domain R615_RS10400 PF00211 Adenylate and Guanylate cyclase catalytic domain R615_RS10400 PF00672 HAMP domain R615_RS10410 PF01425 Amidase R615_RS10415 PF12146 Serine aminopeptidase, S33 R615_RS10425 PF00849 RNA pseudouridylate synthase R615_RS10425 PF01479 S4 domain R615_RS10430 PF08267 Cobalamin-independent synthase, N-terminal domain R615_RS10430 PF01717 Cobalamin-independent synthase, Catalytic domain R615_RS10445 PF13411 MerR HTH family regulatory protein R615_RS10465 PF01370 NAD dependent epimerase/dehydratase family R615_RS10465 PF02222 ATP-grasp domain R615_RS10475 PF00132 Bacterial transferase hexapeptide (six repeats) R615_RS10480 PF00293 NUDIX domain R615_RS10490 PF00293 NUDIX domain R615_RS10490 PF09297 NADH pyrophosphatase zinc ribbon domain R615_RS10495 PF01784 NIF3 (NGG1p interacting factor 3) R615_RS10500 PF03692 Putative zinc- or iron-chelating domain R615_RS10525 PF00873 AcrB/AcrD/AcrF family R615_RS10530 PF08448 PAS fold R615_RS10530 PF08447 PAS fold R615_RS10530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase R615_RS10535 PF00873 AcrB/AcrD/AcrF family R615_RS10575 PF00156 Phosphoribosyl transferase domain R615_RS10585 PF07687 Peptidase dimerisation domain R615_RS10585 PF01546 Peptidase family M20/M25/M40 R615_RS10590 PF13649 Methyltransferase domain R615_RS10605 PF10458 Valyl tRNA synthetase tRNA binding arm R615_RS10605 PF08264 Anticodon-binding domain of tRNA R615_RS10605 PF00133 tRNA synthetases class I (I, L, M and V) R615_RS10650 PF08378 Nuclease-related domain R615_RS10670 PF07308 Protein of unknown function (DUF1456) R615_RS10685 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain R615_RS10685 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain R615_RS10690 PF10458 Valyl tRNA synthetase tRNA binding arm R615_RS10690 PF00133 tRNA synthetases class I (I, L, M and V) R615_RS10690 PF08264 Anticodon-binding domain of tRNA R615_RS10705 PF01027 Inhibitor of apoptosis-promoting Bax1 R615_RS10710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family R615_RS10710 PF03466 LysR substrate binding domain R615_RS10720 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ R615_RS10725 PF07549 SecD/SecF GG Motif R615_RS10725 PF02355 Protein export membrane protein R615_RS10730 PF07549 SecD/SecF GG Motif R615_RS10730 PF13721 SecD export protein N-terminal TM region R615_RS10730 PF02355 Protein export membrane protein R615_RS10735 PF02699 Preprotein translocase subunit R615_RS10740 PF01702 Queuine tRNA-ribosyltransferase R615_RS10745 PF02547 Queuosine biosynthesis protein R615_RS10765 PF00563 EAL domain R615_RS10765 PF00360 Phytochrome region R615_RS10765 PF00990 Diguanylate cyclase, GGDEF domain R615_RS10765 PF01590 GAF domain R615_RS10780 PF00578 AhpC/TSA family R615_RS10795 PF02424 ApbE family R615_RS10810 PF03969 AFG1-like ATPase R615_RS10815 PF02129 X-Pro dipeptidyl-peptidase (S15 family) R615_RS10820 PF01507 Phosphoadenosine phosphosulfate reductase family R615_RS10825 PF00009 Elongation factor Tu GTP binding domain R615_RS10850 PF03881 Fructosamine kinase R615_RS10855 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region R615_RS10855 PF01243 Pyridoxamine 5'-phosphate oxidase R615_RS10865 PF03739 Lipopolysaccharide export system permease LptF/LptG R615_RS10870 PF03739 Lipopolysaccharide export system permease LptF/LptG R615_RS10875 PF00883 Cytosol aminopeptidase family, catalytic domain R615_RS10875 PF02789 Cytosol aminopeptidase family, N-terminal domain R615_RS10890 PF00691 OmpA family R615_RS10905 PF00958 GMP synthase C terminal domain R615_RS10905 PF00117 Glutamine amidotransferase class-I R615_RS10905 PF02540 NAD synthase R615_RS10910 PF00478 IMP dehydrogenase / GMP reductase domain R615_RS10910 PF00571 CBS domain R615_RS10930 PF13742 OB-fold nucleic acid binding domain R615_RS10930 PF02601 Exonuclease VII, large subunit R615_RS10935 PF08525 Opacity-associated protein A N-terminal motif R615_RS10935 PF01476 LysM domain R615_RS10935 PF01551 Peptidase family M23 R615_RS10955 PF05958 tRNA (Uracil-5-)-methyltransferase R615_RS10960 PF03880 DbpA RNA binding domain R615_RS10960 PF00270 DEAD/DEAH box helicase R615_RS10960 PF00271 Helicase conserved C-terminal domain R615_RS10970 PF05726 Pirin C-terminal cupin domain R615_RS10970 PF02678 Pirin R615_RS10985 PF03352 Methyladenine glycosylase R615_RS10995 PF00929 Exonuclease R615_RS10995 PF08411 Exonuclease C-terminal R615_RS11000 PF12697 Alpha/beta hydrolase family R615_RS11015 PF01206 Sulfurtransferase TusA R615_RS11020 PF07690 Major Facilitator Superfamily R615_RS11025 PF00108 Thiolase, N-terminal domain R615_RS11025 PF02803 Thiolase, C-terminal domain R615_RS11035 PF00571 CBS domain R615_RS11035 PF00478 IMP dehydrogenase / GMP reductase domain R615_RS11045 PF05971 RNA methyltransferase R615_RS11055 PF00924 Mechanosensitive ion channel R615_RS11055 PF12795 Mechanosensitive ion channel porin domain R615_RS11055 PF12794 Mechanosensitive ion channel inner membrane domain 1 R615_RS11075 PF00271 Helicase conserved C-terminal domain R615_RS11075 PF08482 ATP-dependent helicase C-terminal R615_RS11075 PF00270 DEAD/DEAH box helicase R615_RS11075 PF04408 Helicase associated domain (HA2) R615_RS11080 PF01925 Sulfite exporter TauE/SafE R615_RS11085 PF00665 Integrase core domain R615_RS11085 PF13276 HTH-like domain R615_RS11085 PF13333 Integrase core domain R615_RS11095 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system R615_RS11100 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system R615_RS11105 PF00210 Ferritin-like domain R615_RS11110 PF02371 Transposase IS116/IS110/IS902 family R615_RS11110 PF01548 Transposase R615_RS11135 PF00677 Lumazine binding domain R615_RS11140 PF01734 Patatin-like phospholipase R615_RS11145 PF02146 Sir2 family R615_RS11155 PF00873 AcrB/AcrD/AcrF family R615_RS11185 PF07859 alpha/beta hydrolase fold R615_RS11190 PF00909 Ammonium Transporter Family R615_RS11195 PF01170 Putative RNA methylase family UPF0020 R615_RS11195 PF02926 THUMP domain R615_RS11195 PF10672 S-adenosylmethionine-dependent methyltransferase R615_RS11200 PF04957 Ribosome modulation factor R615_RS11205 PF01180 Dihydroorotate dehydrogenase R615_RS11220 PF05088 Bacterial NAD-glutamate dehydrogenase R615_RS11225 PF07726 ATPase family associated with various cellular activities (AAA) R615_RS11225 PF17863 AAA lid domain R615_RS11230 PF01882 Protein of unknown function DUF58 R615_RS11240 PF07584 Aerotolerance regulator N-terminal R615_RS11240 PF13519 von Willebrand factor type A domain R615_RS11275 PF02540 NAD synthase R615_RS11275 PF00117 Glutamine amidotransferase class-I R615_RS11275 PF00958 GMP synthase C terminal domain R615_RS11280 PF00533 BRCA1 C Terminus (BRCT) domain R615_RS11280 PF12826 Helix-hairpin-helix motif R615_RS11280 PF03119 NAD-dependent DNA ligase C4 zinc finger domain R615_RS11280 PF03120 NAD-dependent DNA ligase OB-fold domain R615_RS11280 PF01653 NAD-dependent DNA ligase adenylation domain R615_RS11285 PF04354 ZipA, C-terminal FtsZ-binding domain R615_RS11290 PF02463 RecF/RecN/SMC N terminal domain R615_RS11290 PF06470 SMC proteins Flexible Hinge Domain R615_RS11300 PF00487 Fatty acid desaturase R615_RS11325 PF03806 AbgT putative transporter family R615_RS11335 PF00724 NADH:flavin oxidoreductase / NADH oxidase family R615_RS11340 PF03358 NADPH-dependent FMN reductase R615_RS11355 PF00893 Small Multidrug Resistance protein R615_RS11370 PF00583 Acetyltransferase (GNAT) family R615_RS11420 PF02803 Thiolase, C-terminal domain R615_RS11420 PF00108 Thiolase, N-terminal domain R615_RS11425 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain R615_RS11425 PF00378 Enoyl-CoA hydratase/isomerase R615_RS11425 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain R615_RS11440 PF12848 ABC transporter R615_RS11440 PF16326 ABC transporter C-terminal domain R615_RS11440 PF00005 ABC transporter R615_RS11445 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion R615_RS11450 PF00873 AcrB/AcrD/AcrF family R615_RS11495 PF03176 MMPL family R615_RS11505 PF07044 Protein of unknown function (DUF1329) R615_RS11510 PF11940 Domain of unknown function (DUF3458) Ig-like fold R615_RS11510 PF17432 Domain of unknown function (DUF3458_C) ARM repeats R615_RS11510 PF01433 Peptidase family M1 domain R615_RS11525 PF01694 Rhomboid family R615_RS11525 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease R615_RS11530 PF00149 Calcineurin-like phosphoesterase R615_RS11535 PF01513 ATP-NAD kinase R615_RS11610 PF00293 NUDIX domain R615_RS11635 PF10502 Signal peptidase, peptidase S26 R615_RS11640 PF12697 Alpha/beta hydrolase family R615_RS11645 PF01595 Cyclin M transmembrane N-terminal domain R615_RS11645 PF00571 CBS domain R615_RS11645 PF03471 Transporter associated domain R615_RS11650 PF01966 HD domain R615_RS11660 PF01914 MarC family integral membrane protein R615_RS11675 PF00474 Sodium:solute symporter family R615_RS11685 PF08534 Redoxin R615_RS11690 PF01152 Bacterial-like globin R615_RS11700 PF13426 PAS domain R615_RS11700 PF00990 Diguanylate cyclase, GGDEF domain R615_RS11700 PF00563 EAL domain R615_RS11720 PF00474 Sodium:solute symporter family R615_RS11730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase R615_RS11730 PF00512 His Kinase A (phospho-acceptor) domain R615_RS11730 PF09456 RcsC Alpha-Beta-Loop (ABL) R615_RS11730 PF00072 Response regulator receiver domain R615_RS11735 PF00196 Bacterial regulatory proteins, luxR family R615_RS11735 PF00072 Response regulator receiver domain R615_RS11740 PF13193 AMP-binding enzyme C-terminal domain R615_RS11740 PF00501 AMP-binding enzyme R615_RS11740 PF16177 Acetyl-coenzyme A synthetase N-terminus R615_RS11770 PF00691 OmpA family R615_RS11770 PF04972 BON domain R615_RS11785 PF03918 Cytochrome C biogenesis protein R615_RS11790 PF08534 Redoxin R615_RS11795 PF01578 Cytochrome C assembly protein R615_RS11795 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal R615_RS11800 PF03100 CcmE R615_RS11805 PF04995 Heme exporter protein D (CcmD) R615_RS11810 PF01578 Cytochrome C assembly protein R615_RS11815 PF03379 CcmB protein R615_RS11820 PF00005 ABC transporter R615_RS11830 PF01312 FlhB HrpN YscU SpaS Family R615_RS11840 PF00710 Asparaginase, N-terminal R615_RS11840 PF17763 Glutaminase/Asparaginase C-terminal domain R615_RS11850 PF04055 Radical SAM superfamily R615_RS11850 PF06969 HemN C-terminal domain R615_RS11880 PF01590 GAF domain R615_RS11880 PF00563 EAL domain R615_RS11880 PF00990 Diguanylate cyclase, GGDEF domain R615_RS11880 PF00360 Phytochrome region R615_RS11895 PF00871 Acetokinase family R615_RS11900 PF01515 Phosphate acetyl/butaryl transferase R615_RS11900 PF07085 DRTGG domain R615_RS11905 PF01553 Acyltransferase R615_RS11910 PF00563 EAL domain R615_RS11910 PF00360 Phytochrome region R615_RS11910 PF01590 GAF domain R615_RS11910 PF00990 Diguanylate cyclase, GGDEF domain R615_RS11920 PF00291 Pyridoxal-phosphate dependent enzyme R615_RS11935 PF01545 Cation efflux family R615_RS11935 PF16916 Dimerisation domain of Zinc Transporter R615_RS11970 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) R615_RS11970 PF01627 Hpt domain R615_RS11970 PF00512 His Kinase A (phospho-acceptor) domain R615_RS11970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase R615_RS11970 PF00672 HAMP domain R615_RS11970 PF00072 Response regulator receiver domain R615_RS11980 PF12833 Helix-turn-helix domain R615_RS11980 PF00072 Response regulator receiver domain R615_RS11990 PF05193 Peptidase M16 inactive domain R615_RS11990 PF00675 Insulinase (Peptidase family M16) R615_RS11990 PF16187 Middle or third domain of peptidase_M16 R615_RS11995 PF12833 Helix-turn-helix domain R615_RS11995 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term R615_RS12000 PF00743 Flavin-binding monooxygenase-like R615_RS12005 PF00106 short chain dehydrogenase R615_RS12025 PF00512 His Kinase A (phospho-acceptor) domain R615_RS12025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase R615_RS12025 PF00072 Response regulator receiver domain R615_RS12025 PF13188 PAS domain R615_RS12025 PF08448 PAS fold R615_RS12035 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion R615_RS12035 PF00529 HlyD membrane-fusion protein of T1SS R615_RS12040 PF00873 AcrB/AcrD/AcrF family R615_RS12050 PF17768 RecJ OB domain R615_RS12050 PF02272 DHHA1 domain R615_RS12050 PF01368 DHH family R615_RS12065 PF00106 short chain dehydrogenase R615_RS12095 PF01464 Transglycosylase SLT domain R615_RS12095 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain R615_RS12100 PF07044 Protein of unknown function (DUF1329) R615_RS12110 PF01026 TatD related DNase R615_RS12115 PF01625 Peptide methionine sulfoxide reductase R615_RS12130 PF17876 Cold shock domain R615_RS12130 PF08206 Ribonuclease B OB domain R615_RS12130 PF00575 S1 RNA binding domain R615_RS12130 PF00773 RNB domain R615_RS12145 PF02421 Ferrous iron transport protein B R615_RS12145 PF07670 Nucleoside recognition R615_RS12145 PF17910 FeoB cytosolic helical domain R615_RS12145 PF07664 Ferrous iron transport protein B C terminus R615_RS12155 PF01758 Sodium Bile acid symporter family R615_RS12165 PF00313 'Cold-shock' DNA-binding domain R615_RS12170 PF06945 Protein of unknown function (DUF1289) R615_RS12175 PF01261 Xylose isomerase-like TIM barrel R615_RS12180 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase R615_RS12180 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase R615_RS12185 PF08668 HDOD domain R615_RS12200 PF08443 RimK-like ATP-grasp domain R615_RS12200 PF18030 RimK PreATP-grasp domain R615_RS12205 PF00210 Ferritin-like domain R615_RS12210 PF00210 Ferritin-like domain R615_RS12220 PF14821 Threonine synthase N terminus R615_RS12220 PF00291 Pyridoxal-phosphate dependent enzyme R615_RS12240 PF00724 NADH:flavin oxidoreductase / NADH oxidase family R615_RS12240 PF07992 Pyridine nucleotide-disulphide oxidoreductase R615_RS12255 PF01894 Uncharacterised protein family UPF0047 R615_RS12265 PF02978 Signal peptide binding domain R615_RS12265 PF02881 SRP54-type protein, helical bundle domain R615_RS12265 PF00448 SRP54-type protein, GTPase domain R615_RS12275 PF00571 CBS domain R615_RS12275 PF01595 Cyclin M transmembrane N-terminal domain R615_RS12275 PF03471 Transporter associated domain R615_RS12280 PF09334 tRNA synthetases class I (M) R615_RS12280 PF01588 Putative tRNA binding domain R615_RS12285 PF01774 UreD urease accessory protein R615_RS12290 PF00547 Urease, gamma subunit R615_RS12295 PF00699 Urease beta subunit R615_RS12300 PF00449 Urease alpha-subunit, N-terminal domain R615_RS12300 PF01979 Amidohydrolase family R615_RS12305 PF05194 UreE urease accessory protein, C-terminal domain R615_RS12305 PF02814 UreE urease accessory protein, N-terminal domain R615_RS12310 PF01730 UreF R615_RS12315 PF02492 CobW/HypB/UreG, nucleotide-binding domain R615_RS12320 PF04955 HupE / UreJ protein R615_RS12325 PF08207 Elongation factor P (EF-P) KOW-like domain R615_RS12325 PF01132 Elongation factor P (EF-P) OB domain R615_RS12325 PF09285 Elongation factor P, C-terminal R615_RS12345 PF02311 AraC-like ligand binding domain R615_RS12345 PF12833 Helix-turn-helix domain R615_RS12350 PF00441 Acyl-CoA dehydrogenase, C-terminal domain R615_RS12350 PF12806 Acetyl-CoA dehydrogenase C-terminal like R615_RS12350 PF02770 Acyl-CoA dehydrogenase, middle domain R615_RS12350 PF02771 Acyl-CoA dehydrogenase, N-terminal domain R615_RS12355 PF00378 Enoyl-CoA hydratase/isomerase R615_RS12355 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain R615_RS12355 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain R615_RS12360 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal R615_RS12360 PF01926 50S ribosome-binding GTPase R615_RS12365 PF13360 PQQ-like domain R615_RS12375 PF13393 Histidyl-tRNA synthetase R615_RS12375 PF03129 Anticodon binding domain R615_RS12380 PF04551 GcpE protein R615_RS12390 PF04055 Radical SAM superfamily R615_RS12395 PF00334 Nucleoside diphosphate kinase R615_RS12400 PF00266 Aminotransferase class-V R615_RS12405 PF02082 Transcriptional regulator R615_RS12410 PF00132 Bacterial transferase hexapeptide (six repeats) R615_RS12415 PF00588 SpoU rRNA Methylase family R615_RS12420 PF00459 Inositol monophosphatase family R615_RS12425 PF00313 'Cold-shock' DNA-binding domain R615_RS12430 PF04102 SlyX R615_RS12435 PF01553 Acyltransferase R615_RS12440 PF04445 Putative SAM-dependent methyltransferase R615_RS12445 PF02673 Bacitracin resistance protein BacA R615_RS12450 PF00814 Glycoprotease family R615_RS12460 PF05191 Adenylate kinase, active site lid R615_RS12465 PF00311 Phosphoenolpyruvate carboxylase R615_RS12470 PF03819 MazG nucleotide pyrophosphohydrolase domain R615_RS12475 PF04607 Region found in RelA / SpoT proteins R615_RS12475 PF13291 ACT domain R615_RS12475 PF02824 TGS domain R615_RS12480 PF05958 tRNA (Uracil-5-)-methyltransferase R615_RS12480 PF01938 TRAM domain R615_RS12485 PF00291 Pyridoxal-phosphate dependent enzyme R615_RS12490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase R615_RS12490 PF00512 His Kinase A (phospho-acceptor) domain R615_RS12490 PF01627 Hpt domain R615_RS12490 PF00072 Response regulator receiver domain R615_RS12490 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) R615_RS12490 PF00672 HAMP domain R615_RS12495 PF01648 4'-phosphopantetheinyl transferase superfamily R615_RS12500 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ R615_RS12505 PF11967 Recombination protein O N terminal R615_RS12505 PF02565 Recombination protein O C terminal R615_RS12510 PF07650 KH domain R615_RS12510 PF01926 50S ribosome-binding GTPase R615_RS12515 PF00035 Double-stranded RNA binding motif R615_RS12515 PF14622 Ribonuclease-III-like R615_RS12525 PF00679 Elongation factor G C-terminus R615_RS12525 PF00009 Elongation factor Tu GTP binding domain R615_RS12525 PF03144 Elongation factor Tu domain 2 R615_RS12525 PF06421 GTP-binding protein LepA C-terminus R615_RS12530 PF13180 PDZ domain R615_RS12540 PF17188 MucB/RseB C-terminal domain R615_RS12540 PF03888 MucB/RseB N-terminal domain R615_RS12550 PF04542 Sigma-70 region 2 R615_RS12550 PF08281 Sigma-70, region 4 R615_RS12555 PF02910 Fumarate reductase flavoprotein C-term R615_RS12555 PF00890 FAD binding domain R615_RS12565 PF03937 Flavinator of succinate dehydrogenase R615_RS12570 PF01571 Aminomethyltransferase folate-binding domain R615_RS12580 PF00378 Enoyl-CoA hydratase/isomerase R615_RS12590 PF00561 alpha/beta hydrolase fold R615_RS12605 PF03544 Gram-negative bacterial TonB protein C-terminal R615_RS12610 PF02472 Biopolymer transport protein ExbD/TolR R615_RS12615 PF01618 MotA/TolQ/ExbB proton channel family R615_RS12620 PF01618 MotA/TolQ/ExbB proton channel family R615_RS12640 PF03466 LysR substrate binding domain R615_RS12640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family R615_RS12655 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) R615_RS12660 PF18389 TrmO C-terminal domain R615_RS12660 PF01980 tRNA-methyltransferase O R615_RS12665 PF05724 Thiopurine S-methyltransferase (TPMT) R615_RS12680 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term R615_RS12680 PF12833 Helix-turn-helix domain R615_RS12685 PF01029 NusB family R615_RS12685 PF01189 16S rRNA methyltransferase RsmB/F R615_RS12695 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain R615_RS12695 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain R615_RS12700 PF00005 ABC transporter R615_RS12700 PF00664 ABC transporter transmembrane region R615_RS12725 PF00762 Ferrochelatase R615_RS12730 PF14403 Circularly permuted ATP-grasp type 2 R615_RS12750 PF03358 NADPH-dependent FMN reductase R615_RS12755 PF00155 Aminotransferase class I and II R615_RS12760 PF03186 CobD/Cbib protein R615_RS12775 PF00881 Nitroreductase family R615_RS12795 PF01555 DNA methylase R615_RS12825 PF02796 Helix-turn-helix domain of resolvase R615_RS12825 PF00239 Resolvase, N terminal domain R615_RS12835 PF04002 RadC-like JAB domain R615_RS12840 PF01381 Helix-turn-helix R615_RS12860 PF00781 Diacylglycerol kinase catalytic domain R615_RS12870 PF01047 MarR family R615_RS12905 PF03747 ADP-ribosylglycohydrolase R615_RS12910 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases R615_RS12920 PF02021 Uncharacterised protein family UPF0102 R615_RS12925 PF13580 SIS domain R615_RS12930 PF01544 CorA-like Mg2+ transporter protein R615_RS12940 PF07992 Pyridine nucleotide-disulphide oxidoreductase R615_RS12945 PF00899 ThiF family R615_RS12950 PF17827 PrmC N-terminal domain R615_RS12950 PF13847 Methyltransferase domain R615_RS12955 PF03462 PCRF domain R615_RS12955 PF00472 RF-1 domain R615_RS12960 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain R615_RS12960 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain R615_RS12960 PF01488 Shikimate / quinate 5-dehydrogenase R615_RS12970 PF03550 Outer membrane lipoprotein LolB R615_RS12975 PF08544 GHMP kinases C terminal R615_RS12975 PF00288 GHMP kinases N terminal domain R615_RS12985 PF14572 Phosphoribosyl synthetase-associated domain R615_RS12985 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase R615_RS12990 PF14693 Ribosomal protein TL5, C-terminal domain R615_RS12990 PF01386 Ribosomal L25p family R615_RS12995 PF01195 Peptidyl-tRNA hydrolase R615_RS13000 PF06071 Protein of unknown function (DUF933) R615_RS13000 PF01926 50S ribosome-binding GTPase R615_RS13005 PF07690 Major Facilitator Superfamily R615_RS13030 PF00919 Uncharacterized protein family UPF0004 R615_RS13030 PF01938 TRAM domain R615_RS13030 PF04055 Radical SAM superfamily R615_RS13035 PF02562 PhoH-like protein R615_RS13040 PF02130 Uncharacterized protein family UPF0054 R615_RS13045 PF03471 Transporter associated domain R615_RS13045 PF00571 CBS domain R615_RS13050 PF00795 Carbon-nitrogen hydrolase R615_RS13065 PF00293 NUDIX domain R615_RS13070 PF01960 ArgJ family R615_RS13075 PF02810 SEC-C motif R615_RS13075 PF07517 SecA DEAD-like domain R615_RS13075 PF01043 SecA preprotein cross-linking domain R615_RS13075 PF07516 SecA Wing and Scaffold domain R615_RS13080 PF01551 Peptidase family M23 R615_RS13080 PF01476 LysM domain R615_RS13080 PF08525 Opacity-associated protein A N-terminal motif R615_RS13085 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase R615_RS13090 PF00091 Tubulin/FtsZ family, GTPase domain R615_RS13090 PF12327 FtsZ family, C-terminal domain R615_RS13095 PF02491 SHS2 domain inserted in FTSA R615_RS13100 PF03799 Cell division protein FtsQ R615_RS13100 PF08478 POTRA domain, FtsQ-type R615_RS13105 PF07478 D-ala D-ala ligase C-terminus R615_RS13105 PF01820 D-ala D-ala ligase N-terminus R615_RS13110 PF01225 Mur ligase family, catalytic domain R615_RS13110 PF08245 Mur ligase middle domain R615_RS13110 PF02875 Mur ligase family, glutamate ligase domain R615_RS13115 PF04101 Glycosyltransferase family 28 C-terminal domain R615_RS13115 PF03033 Glycosyltransferase family 28 N-terminal domain R615_RS13120 PF01098 Cell cycle protein R615_RS13125 PF08245 Mur ligase middle domain R615_RS13125 PF02875 Mur ligase family, glutamate ligase domain R615_RS13130 PF00953 Glycosyl transferase family 4 R615_RS13130 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 R615_RS13135 PF08245 Mur ligase middle domain R615_RS13135 PF02875 Mur ligase family, glutamate ligase domain R615_RS13135 PF01225 Mur ligase family, catalytic domain R615_RS13140 PF01225 Mur ligase family, catalytic domain R615_RS13140 PF08245 Mur ligase middle domain R615_RS13140 PF02875 Mur ligase family, glutamate ligase domain R615_RS13145 PF03717 Penicillin-binding Protein dimerisation domain R615_RS13145 PF00905 Penicillin binding protein transpeptidase domain R615_RS13155 PF01795 MraW methylase family R615_RS13160 PF02381 MraZ protein, putative antitoxin-like R615_RS13200 PF00202 Aminotransferase class-III R615_RS13205 PF00155 Aminotransferase class I and II R615_RS13230 PF10417 C-terminal domain of 1-Cys peroxiredoxin R615_RS13230 PF00578 AhpC/TSA family R615_RS13245 PF12833 Helix-turn-helix domain R615_RS13250 PF08669 Glycine cleavage T-protein C-terminal barrel domain R615_RS13250 PF01571 Aminomethyltransferase folate-binding domain R615_RS13255 PF01597 Glycine cleavage H-protein R615_RS13260 PF02347 Glycine cleavage system P-protein R615_RS13280 PF00892 EamA-like transporter family R615_RS13285 PF00982 Glycosyltransferase family 20 R615_RS13285 PF05116 Sucrose-6F-phosphate phosphohydrolase R615_RS13290 PF02743 Cache domain R615_RS13290 PF00672 HAMP domain R615_RS13290 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain R615_RS13305 PF00128 Alpha amylase, catalytic domain R615_RS13310 PF06039 Malate:quinone oxidoreductase (Mqo) R615_RS13315 PF13509 S1 domain R615_RS13315 PF17783 CvfB-like winged helix domain R615_RS13330 PF09905 DNA-binding protein VF530 R615_RS13335 PF02028 BCCT, betaine/carnitine/choline family transporter R615_RS13340 PF00005 ABC transporter R615_RS13340 PF12848 ABC transporter R615_RS13345 PF17200 Single Cache domain 2 R615_RS13345 PF00672 HAMP domain R615_RS13345 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain R615_RS13360 PF03600 Citrate transporter R615_RS13380 PF09179 TilS substrate binding domain R615_RS13380 PF01171 PP-loop family R615_RS13380 PF11734 TilS substrate C-terminal domain R615_RS13385 PF17657 Bacterial DNA polymerase III alpha subunit finger domain R615_RS13385 PF01336 OB-fold nucleic acid binding domain R615_RS13385 PF07733 Bacterial DNA polymerase III alpha NTPase domain R615_RS13385 PF14579 Helix-hairpin-helix motif R615_RS13385 PF02811 PHP domain R615_RS13390 PF18030 RimK PreATP-grasp domain R615_RS13390 PF08443 RimK-like ATP-grasp domain R615_RS13400 PF00885 6,7-dimethyl-8-ribityllumazine synthase R615_RS13410 PF01026 TatD related DNase R615_RS13420 PF00271 Helicase conserved C-terminal domain R615_RS13420 PF00270 DEAD/DEAH box helicase R615_RS13430 PF13533 Biotin-lipoyl like R615_RS13435 PF00005 ABC transporter R615_RS13450 PF09905 DNA-binding protein VF530 R615_RS13490 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) R615_RS13490 PF01348 Type II intron maturase R615_RS13495 PF00118 TCP-1/cpn60 chaperonin family R615_RS13500 PF00166 Chaperonin 10 Kd subunit R615_RS13510 PF00743 Flavin-binding monooxygenase-like R615_RS13530 PF15975 Flotillin R615_RS13530 PF01145 SPFH domain / Band 7 family R615_RS13535 PF00378 Enoyl-CoA hydratase/isomerase R615_RS13535 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain R615_RS13535 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain R615_RS13540 PF02803 Thiolase, C-terminal domain R615_RS13540 PF00108 Thiolase, N-terminal domain R615_RS13550 PF02515 CoA-transferase family III R615_RS13555 PF13411 MerR HTH family regulatory protein R615_RS13570 PF00743 Flavin-binding monooxygenase-like R615_RS13575 PF12729 Four helix bundle sensory module for signal transduction R615_RS13575 PF00672 HAMP domain R615_RS13575 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain R615_RS13580 PF02817 e3 binding domain R615_RS13580 PF00364 Biotin-requiring enzyme R615_RS13580 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) R615_RS13585 PF17831 Pyruvate dehydrogenase E1 component middle domain R615_RS13585 PF00456 Transketolase, thiamine diphosphate binding domain R615_RS13590 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP R615_RS13590 PF12557 Cob(I)alamin adenosyltransferase N terminal R615_RS13595 PF01497 Periplasmic binding protein R615_RS13600 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain R615_RS13600 PF07685 CobB/CobQ-like glutamine amidotransferase domain R615_RS13605 PF02654 Cobalamin-5-phosphate synthase R615_RS13615 PF02277 Phosphoribosyltransferase R615_RS13620 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase R615_RS13630 PF00480 ROK family R615_RS13640 PF01510 N-acetylmuramoyl-L-alanine amidase R615_RS13645 PF01235 Sodium:alanine symporter family R615_RS13650 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain R615_RS13650 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain R615_RS13655 PF00114 Pilin (bacterial filament) R615_RS13655 PF07963 Prokaryotic N-terminal methylation motif R615_RS13665 PF00884 Sulfatase R615_RS13670 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain R615_RS13670 PF00437 Type II/IV secretion system protein R615_RS13675 PF00482 Type II secretion system (T2SS), protein F R615_RS13680 PF01478 Type IV leader peptidase family R615_RS13680 PF06750 Bacterial Peptidase A24 N-terminal domain R615_RS13685 PF01121 Dephospho-CoA kinase R615_RS13690 PF03884 DNA gyrase inhibitor YacG R615_RS13700 PF00196 Bacterial regulatory proteins, luxR family R615_RS13700 PF00072 Response regulator receiver domain R615_RS13720 PF08264 Anticodon-binding domain of tRNA R615_RS13720 PF13603 Leucyl-tRNA synthetase, Domain 2 R615_RS13720 PF00133 tRNA synthetases class I (I, L, M and V) R615_RS13745 PF00563 EAL domain R615_RS13745 PF01590 GAF domain R615_RS13745 PF00990 Diguanylate cyclase, GGDEF domain R615_RS13745 PF00360 Phytochrome region R615_RS13750 PF01161 Phosphatidylethanolamine-binding protein R615_RS13760 PF08534 Redoxin R615_RS13760 PF00462 Glutaredoxin R615_RS13780 PF02441 Flavoprotein R615_RS13785 PF01225 Mur ligase family, catalytic domain R615_RS13785 PF02875 Mur ligase family, glutamate ligase domain R615_RS13785 PF08245 Mur ligase middle domain R615_RS13790 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain R615_RS13795 PF17149 Periplasmic sensor domain found in signal transduction proteins R615_RS13795 PF00072 Response regulator receiver domain R615_RS13795 PF00672 HAMP domain R615_RS13795 PF00512 His Kinase A (phospho-acceptor) domain R615_RS13795 PF01627 Hpt domain R615_RS13795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase R615_RS13815 PF00593 TonB dependent receptor R615_RS13815 PF07715 TonB-dependent Receptor Plug Domain R615_RS13820 PF00719 Inorganic pyrophosphatase R615_RS13825 PF01740 STAS domain R615_RS13825 PF13426 PAS domain R615_RS13830 PF13411 MerR HTH family regulatory protein R615_RS13835 PF05175 Methyltransferase small domain R615_RS13835 PF08468 Methyltransferase small domain N-terminal R615_RS13840 PF07690 Major Facilitator Superfamily R615_RS13840 PF00083 Sugar (and other) transporter R615_RS13845 PF02675 S-adenosylmethionine decarboxylase R615_RS13850 PF02566 OsmC-like protein R615_RS13855 PF13545 Crp-like helix-turn-helix domain R615_RS13855 PF00027 Cyclic nucleotide-binding domain R615_RS13860 PF00218 Indole-3-glycerol phosphate synthase R615_RS13865 PF00591 Glycosyl transferase family, a/b domain R615_RS13865 PF02885 Glycosyl transferase family, helical bundle domain R615_RS13870 PF00117 Glutamine amidotransferase class-I R615_RS13875 PF00425 chorismate binding enzyme R615_RS13875 PF04715 Anthranilate synthase component I, N terminal region R615_RS13895 PF00440 Bacterial regulatory proteins, tetR family R615_RS13900 PF12806 Acetyl-CoA dehydrogenase C-terminal like R615_RS13900 PF02770 Acyl-CoA dehydrogenase, middle domain R615_RS13900 PF00441 Acyl-CoA dehydrogenase, C-terminal domain R615_RS13900 PF02771 Acyl-CoA dehydrogenase, N-terminal domain R615_RS13905 PF02771 Acyl-CoA dehydrogenase, N-terminal domain R615_RS13905 PF02770 Acyl-CoA dehydrogenase, middle domain R615_RS13905 PF12806 Acetyl-CoA dehydrogenase C-terminal like R615_RS13905 PF00441 Acyl-CoA dehydrogenase, C-terminal domain R615_RS13920 PF06968 Biotin and Thiamin Synthesis associated domain R615_RS13920 PF04055 Radical SAM superfamily R615_RS13925 PF00156 Phosphoribosyl transferase domain R615_RS13930 PF01636 Phosphotransferase enzyme family R615_RS13940 PF07044 Protein of unknown function (DUF1329) R615_RS13950 PF12262 Bacterial virulence factor lipase N-terminal R615_RS13955 PF02803 Thiolase, C-terminal domain R615_RS13955 PF00108 Thiolase, N-terminal domain R615_RS13960 PF01842 ACT domain R615_RS13960 PF00551 Formyl transferase R615_RS13975 PF03641 Possible lysine decarboxylase R615_RS13975 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases R615_RS13975 PF11892 Domain of unknown function (DUF3412) R615_RS13980 PF00245 Alkaline phosphatase R615_RS13995 PF13677 Membrane MotB of proton-channel complex MotA/MotB R615_RS13995 PF00691 OmpA family R615_RS14000 PF01618 MotA/TolQ/ExbB proton channel family R615_RS14020 PF01329 Pterin 4 alpha carbinolamine dehydratase R615_RS14055 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain R615_RS14055 PF02777 Iron/manganese superoxide dismutases, C-terminal domain R615_RS14060 PF02545 Maf-like protein R615_RS14065 PF03958 Bacterial type II/III secretion system short domain R615_RS14065 PF00263 Bacterial type II and III secretion system protein R615_RS14080 PF01541 GIY-YIG catalytic domain R615_RS14085 PF03006 Haemolysin-III related R615_RS14090 PF00472 RF-1 domain R615_RS14095 PF00226 DnaJ domain R615_RS14095 PF05099 Tellurite resistance protein TerB R615_RS14100 PF00483 Nucleotidyl transferase R615_RS14105 PF01636 Phosphotransferase enzyme family R615_RS14110 PF03968 OstA-like protein R615_RS14110 PF04453 LPS transport system D R615_RS14115 PF00639 PPIC-type PPIASE domain R615_RS14115 PF09312 SurA N-terminal domain R615_RS14120 PF04166 Pyridoxal phosphate biosynthetic protein PdxA R615_RS14125 PF00398 Ribosomal RNA adenine dimethylase R615_RS14130 PF04379 ApaG domain R615_RS14135 PF00149 Calcineurin-like phosphoesterase R615_RS14140 PF00581 Rhodanese-like domain R615_RS14145 PF08298 PrkA AAA domain R615_RS14145 PF06798 PrkA serine protein kinase C-terminal domain R615_RS14150 PF04285 Protein of unknown function (DUF444) R615_RS14155 PF04293 SpoVR like protein R615_RS14185 PF12627 Probable RNA and SrmB- binding site of polymerase A R615_RS14185 PF01743 Poly A polymerase head domain R615_RS14185 PF01966 HD domain R615_RS14190 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) R615_RS14190 PF00809 Pterin binding enzyme R615_RS14195 PF02152 Dihydroneopterin aldolase R615_RS14200 PF00814 Glycoprotease family R615_RS14205 PF01165 Ribosomal protein S21 R615_RS14210 PF09424 Yqey-like protein R615_RS14215 PF08275 DNA primase catalytic core, N-terminal domain R615_RS14215 PF08278 DNA primase DnaG DnaB-binding R615_RS14215 PF10410 DnaB-helicase binding domain of primase R615_RS14215 PF13662 Toprim domain R615_RS14215 PF01807 CHC2 zinc finger R615_RS14220 PF04545 Sigma-70, region 4 R615_RS14220 PF04539 Sigma-70 region 3 R615_RS14220 PF03979 Sigma-70 factor, region 1.1 R615_RS14220 PF04542 Sigma-70 region 2 R615_RS14220 PF04546 Sigma-70, non-essential region R615_RS14220 PF00140 Sigma-70 factor, region 1.2 R615_RS14230 PF00360 Phytochrome region R615_RS14230 PF00563 EAL domain R615_RS14230 PF00990 Diguanylate cyclase, GGDEF domain R615_RS14230 PF01590 GAF domain R615_RS14235 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term R615_RS14235 PF12833 Helix-turn-helix domain R615_RS14250 PF00378 Enoyl-CoA hydratase/isomerase R615_RS14260 PF00501 AMP-binding enzyme R615_RS14260 PF13193 AMP-binding enzyme C-terminal domain R615_RS14275 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 R615_RS14280 PF08546 Ketopantoate reductase PanE/ApbA C terminal R615_RS14280 PF02558 Ketopantoate reductase PanE/ApbA R615_RS14285 PF00743 Flavin-binding monooxygenase-like R615_RS14290 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term R615_RS14290 PF12833 Helix-turn-helix domain R615_RS14295 PF00990 Diguanylate cyclase, GGDEF domain R615_RS14315 PF00596 Class II Aldolase and Adducin N-terminal domain R615_RS14335 PF02599 Global regulator protein family R615_RS14340 PF00696 Amino acid kinase family R615_RS14340 PF01842 ACT domain R615_RS14340 PF13840 ACT domain R615_RS14345 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain R615_RS14345 PF01411 tRNA synthetases class II (A) R615_RS14345 PF02272 DHHA1 domain R615_RS14365 PF00561 alpha/beta hydrolase fold R615_RS14370 PF07992 Pyridine nucleotide-disulphide oxidoreductase R615_RS14375 PF12833 Helix-turn-helix domain R615_RS14375 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term R615_RS14380 PF02631 RecX family R615_RS14385 PF00154 recA bacterial DNA recombination protein R615_RS14390 PF02464 Competence-damaged protein R615_RS14395 PF00873 AcrB/AcrD/AcrF family R615_RS14415 PF05188 MutS domain II R615_RS14415 PF01624 MutS domain I R615_RS14415 PF00488 MutS domain V R615_RS14415 PF05190 MutS family domain IV R615_RS14415 PF05192 MutS domain III R615_RS14420 PF11953 Domain of unknown function (DUF3470) R615_RS14420 PF00037 4Fe-4S binding domain R615_RS14425 PF00994 Probable molybdopterin binding domain R615_RS14425 PF03454 MoeA C-terminal region (domain IV) R615_RS14425 PF03453 MoeA N-terminal region (domain I and II) R615_RS14430 PF01557 Fumarylacetoacetate (FAA) hydrolase family R615_RS14440 PF00005 ABC transporter R615_RS14440 PF12848 ABC transporter R615_RS14445 PF03707 Bacterial signalling protein N terminal repeat R615_RS14445 PF00990 Diguanylate cyclase, GGDEF domain R615_RS14445 PF00563 EAL domain R615_RS14450 PF00464 Serine hydroxymethyltransferase R615_RS14475 PF03477 ATP cone domain R615_RS14480 PF01872 RibD C-terminal domain R615_RS14480 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region R615_RS14485 PF00677 Lumazine binding domain R615_RS14490 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase R615_RS14490 PF00925 GTP cyclohydrolase II R615_RS14495 PF00885 6,7-dimethyl-8-ribityllumazine synthase R615_RS14500 PF01029 NusB family R615_RS14505 PF00586 AIR synthase related protein, N-terminal domain R615_RS14505 PF02769 AIR synthase related protein, C-terminal domain R615_RS14525 PF04073 Aminoacyl-tRNA editing domain R615_RS14535 PF10415 Fumarase C C-terminus R615_RS14535 PF00206 Lyase R615_RS14540 PF00106 short chain dehydrogenase R615_RS14545 PF00106 short chain dehydrogenase R615_RS14550 PF00743 Flavin-binding monooxygenase-like R615_RS14565 PF00588 SpoU rRNA Methylase family R615_RS14565 PF08032 RNA 2'-O ribose methyltransferase substrate binding R615_RS14570 PF02780 Transketolase, C-terminal domain R615_RS14570 PF00456 Transketolase, thiamine diphosphate binding domain R615_RS14570 PF02779 Transketolase, pyrimidine binding domain R615_RS14580 PF00849 RNA pseudouridylate synthase R615_RS14580 PF01479 S4 domain R615_RS14585 PF00561 alpha/beta hydrolase fold R615_RS14590 PF09423 PhoD-like phosphatase R615_RS14590 PF16655 PhoD-like phosphatase, N-terminal domain R615_RS14595 PF00561 alpha/beta hydrolase fold R615_RS14610 PF00883 Cytosol aminopeptidase family, catalytic domain R615_RS14620 PF00484 Carbonic anhydrase R615_RS14625 PF00364 Biotin-requiring enzyme R615_RS14625 PF02436 Conserved carboxylase domain R615_RS14625 PF00682 HMGL-like R615_RS14630 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain R615_RS14630 PF00289 Biotin carboxylase, N-terminal domain R615_RS14630 PF02785 Biotin carboxylase C-terminal domain R615_RS14635 PF03466 LysR substrate binding domain R615_RS14635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family R615_RS14655 PF13419 Haloacid dehalogenase-like hydrolase R615_RS14685 PF03176 MMPL family R615_RS14700 PF00296 Luciferase-like monooxygenase R615_RS14715 PF07992 Pyridine nucleotide-disulphide oxidoreductase R615_RS14715 PF13192 Thioredoxin domain R615_RS14720 PF10417 C-terminal domain of 1-Cys peroxiredoxin R615_RS14720 PF00578 AhpC/TSA family R615_RS14725 PF05643 Putative bacterial lipoprotein (DUF799) R615_RS14735 PF03783 Curli production assembly/transport component CsgG R615_RS14740 PF00924 Mechanosensitive ion channel R615_RS14745 PF08032 RNA 2'-O ribose methyltransferase substrate binding R615_RS14745 PF00588 SpoU rRNA Methylase family R615_RS14750 PF00575 S1 RNA binding domain R615_RS14750 PF00773 RNB domain R615_RS14750 PF08206 Ribonuclease B OB domain R615_RS14750 PF08461 Ribonuclease R winged-helix domain R615_RS14750 PF17876 Cold shock domain R615_RS14760 PF07724 AAA domain (Cdc48 subfamily) R615_RS14760 PF10431 C-terminal, D2-small domain, of ClpB protein R615_RS14760 PF00004 ATPase family associated with various cellular activities (AAA) R615_RS14765 PF00227 Proteasome subunit R615_RS14770 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase R615_RS14785 PF00753 Metallo-beta-lactamase superfamily R615_RS14795 PF01197 Ribosomal protein L31 R615_RS14800 PF00271 Helicase conserved C-terminal domain R615_RS14800 PF17764 3′ DNA-binding domain (3′BD) R615_RS14800 PF18074 Primosomal protein N C-terminal domain R615_RS14800 PF18319 PriA DNA helicase Cys-rich region (CRR) domain R615_RS14800 PF00270 DEAD/DEAH box helicase R615_RS14805 PF04608 Phosphatidylglycerophosphatase A R615_RS14810 PF04298 Putative neutral zinc metallopeptidase R615_RS14815 PF00925 GTP cyclohydrolase II R615_RS14820 PF00072 Response regulator receiver domain R615_RS14820 PF02954 Bacterial regulatory protein, Fis family R615_RS14820 PF00158 Sigma-54 interaction domain R615_RS14825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase R615_RS14825 PF00497 Bacterial extracellular solute-binding proteins, family 3 R615_RS14825 PF00512 His Kinase A (phospho-acceptor) domain R615_RS14830 PF02779 Transketolase, pyrimidine binding domain R615_RS14830 PF02780 Transketolase, C-terminal domain R615_RS14830 PF13292 1-deoxy-D-xylulose-5-phosphate synthase R615_RS14835 PF00348 Polyprenyl synthetase R615_RS14840 PF02609 Exonuclease VII small subunit R615_RS14845 PF01618 MotA/TolQ/ExbB proton channel family R615_RS14850 PF00691 OmpA family R615_RS14850 PF13677 Membrane MotB of proton-channel complex MotA/MotB R615_RS14860 PF04452 RNA methyltransferase R615_RS14870 PF18073 Rubredoxin metal binding domain R615_RS14875 PF03334 Na+/H+ antiporter subunit R615_RS14880 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) R615_RS14885 PF01899 Na+/H+ ion antiporter subunit R615_RS14890 PF00361 Proton-conducting membrane transporter R615_RS14895 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L R615_RS14900 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus R615_RS14900 PF00361 Proton-conducting membrane transporter R615_RS14900 PF13244 Domain of unknown function (DUF4040) R615_RS14900 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter R615_RS14905 PF01208 Uroporphyrinogen decarboxylase (URO-D) R615_RS14915 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster R615_RS14915 PF07992 Pyridine nucleotide-disulphide oxidoreductase R615_RS14920 PF01493 GXGXG motif R615_RS14920 PF00310 Glutamine amidotransferases class-II R615_RS14920 PF01645 Conserved region in glutamate synthase R615_RS14920 PF04898 Glutamate synthase central domain R615_RS14930 PF01761 3-dehydroquinate synthase R615_RS14935 PF01202 Shikimate kinase R615_RS14940 PF11741 AMIN domain R615_RS14940 PF07660 Secretin and TonB N terminus short domain R615_RS14940 PF03958 Bacterial type II/III secretion system short domain R615_RS14940 PF00263 Bacterial type II and III secretion system protein R615_RS14945 PF04351 Pilus assembly protein, PilP R615_RS14950 PF04350 Pilus assembly protein, PilO R615_RS14955 PF05137 Fimbrial assembly protein (PilN) R615_RS14960 PF11104 Type IV pilus assembly protein PilM; R615_RS14965 PF17092 Penicillin-binding protein OB-like domain R615_RS14965 PF00912 Transglycosylase R615_RS14965 PF00905 Penicillin binding protein transpeptidase domain R615_RS14970 PF01565 FAD binding domain R615_RS14970 PF02913 FAD linked oxidases, C-terminal domain R615_RS14975 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain R615_RS14975 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain R615_RS14985 PF00005 ABC transporter R615_RS14990 PF01230 HIT domain R615_RS14995 PF00072 Response regulator receiver domain R615_RS14995 PF00990 Diguanylate cyclase, GGDEF domain R615_RS15030 PF01794 Ferric reductase like transmembrane component R615_RS15035 PF00174 Oxidoreductase molybdopterin binding domain R615_RS15040 PF01066 CDP-alcohol phosphatidyltransferase R615_RS15045 PF03466 LysR substrate binding domain R615_RS15045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family R615_RS15050 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain R615_RS15050 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain R615_RS15055 PF00990 Diguanylate cyclase, GGDEF domain R615_RS15055 PF13426 PAS domain R615_RS15055 PF08447 PAS fold R615_RS15055 PF08448 PAS fold R615_RS15055 PF00563 EAL domain R615_RS15055 PF05231 MASE1 R615_RS15060 PF00155 Aminotransferase class I and II R615_RS15065 PF02657 Fe-S metabolism associated domain R615_RS15075 PF00732 GMC oxidoreductase R615_RS15075 PF05199 GMC oxidoreductase R615_RS15090 PF01116 Fructose-bisphosphate aldolase class-II R615_RS15095 PF00162 Phosphoglycerate kinase R615_RS15100 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain R615_RS15100 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain R615_RS15120 PF00171 Aldehyde dehydrogenase family R615_RS15140 PF01979 Amidohydrolase family R615_RS15145 PF04115 Ureidoglycolate lyase R615_RS15150 PF00576 HIUase/Transthyretin family R615_RS15160 PF03561 Allantoicase repeat R615_RS15170 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain R615_RS15170 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase R615_RS15175 PF03450 CO dehydrogenase flavoprotein C-terminal domain R615_RS15175 PF00941 FAD binding domain in molybdopterin dehydrogenase R615_RS15180 PF00005 ABC transporter R615_RS15190 PF02653 Branched-chain amino acid transport system / permease component R615_RS15195 PF01156 Inosine-uridine preferring nucleoside hydrolase R615_RS15200 PF00962 Adenosine/AMP deaminase R615_RS15205 PF00593 TonB dependent receptor R615_RS15205 PF07715 TonB-dependent Receptor Plug Domain R615_RS15215 PF01618 MotA/TolQ/ExbB proton channel family R615_RS15220 PF01618 MotA/TolQ/ExbB proton channel family R615_RS15225 PF02472 Biopolymer transport protein ExbD/TolR R615_RS15245 PF08362 YcdC-like protein, C-terminal region R615_RS15245 PF00440 Bacterial regulatory proteins, tetR family R615_RS15250 PF02112 cAMP phosphodiesterases class-II R615_RS15255 PF01979 Amidohydrolase family R615_RS15265 PF00107 Zinc-binding dehydrogenase R615_RS15265 PF08240 Alcohol dehydrogenase GroES-like domain R615_RS15280 PF04237 YjbR R615_RS15285 PF01168 Alanine racemase, N-terminal domain R615_RS15285 PF00842 Alanine racemase, C-terminal domain R615_RS15340 PF00772 DnaB-like helicase N terminal domain R615_RS15340 PF03796 DnaB-like helicase C terminal domain R615_RS15345 PF03948 Ribosomal protein L9, C-terminal domain R615_RS15345 PF01281 Ribosomal protein L9, N-terminal domain R615_RS15355 PF01084 Ribosomal protein S18 R615_RS15360 PF01250 Ribosomal protein S6 R615_RS15380 PF00258 Flavodoxin R615_RS15390 PF09297 NADH pyrophosphatase zinc ribbon domain R615_RS15390 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain R615_RS15390 PF00293 NUDIX domain R615_RS15395 PF07683 Cobalamin synthesis protein cobW C-terminal domain R615_RS15395 PF02492 CobW/HypB/UreG, nucleotide-binding domain R615_RS15400 PF00459 Inositol monophosphatase family R615_RS15405 PF03280 Proteobacterial lipase chaperone protein R615_RS15410 PF00561 alpha/beta hydrolase fold R615_RS15415 PF03060 Nitronate monooxygenase R615_RS15425 PF00512 His Kinase A (phospho-acceptor) domain R615_RS15425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase R615_RS15425 PF16527 Two-component sensor protein CpxA, periplasmic domain R615_RS15425 PF00672 HAMP domain R615_RS15430 PF00486 Transcriptional regulatory protein, C terminal R615_RS15430 PF00072 Response regulator receiver domain R615_RS15440 PF00571 CBS domain R615_RS15465 PF12804 MobA-like NTP transferase domain R615_RS15465 PF14602 Hexapeptide repeat of succinyl-transferase R615_RS15465 PF00132 Bacterial transferase hexapeptide (six repeats) R615_RS15495 PF00873 AcrB/AcrD/AcrF family R615_RS15510 PF03781 Sulfatase-modifying factor enzyme 1 R615_RS15510 PF12867 DinB superfamily R615_RS15515 PF01297 Zinc-uptake complex component A periplasmic R615_RS15520 PF01475 Ferric uptake regulator family R615_RS15525 PF00005 ABC transporter R615_RS15530 PF00950 ABC 3 transport family R615_RS15535 PF02630 SCO1/SenC R615_RS15540 PF01554 MatE R615_RS15580 PF03965 Penicillinase repressor R615_RS15600 PF00873 AcrB/AcrD/AcrF family R615_RS15620 PF01381 Helix-turn-helix R615_RS15630 PF04851 Type III restriction enzyme, res subunit R615_RS15635 PF00892 EamA-like transporter family R615_RS15640 PF01554 MatE R615_RS15650 PF03466 LysR substrate binding domain R615_RS15650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family R615_RS15655 PF01292 Prokaryotic cytochrome b561 R615_RS15660 PF04264 YceI-like domain R615_RS15675 PF01258 Prokaryotic dksA/traR C4-type zinc finger R615_RS15690 PF00581 Rhodanese-like domain R615_RS15705 PF02322 Cytochrome bd terminal oxidase subunit II R615_RS15710 PF01654 Cytochrome bd terminal oxidase subunit I R615_RS15720 PF00672 HAMP domain R615_RS15720 PF00563 EAL domain R615_RS15720 PF17154 Gammaproteobacterial periplasmic sensor domain R615_RS15720 PF00990 Diguanylate cyclase, GGDEF domain R615_RS15740 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component R615_RS15740 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component R615_RS15745 PF07859 alpha/beta hydrolase fold R615_RS15750 PF01196 Ribosomal protein L17 R615_RS15755 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain R615_RS15755 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain R615_RS15755 PF01000 RNA polymerase Rpb3/RpoA insert domain R615_RS15760 PF00163 Ribosomal protein S4/S9 N-terminal domain R615_RS15760 PF01479 S4 domain R615_RS15765 PF00411 Ribosomal protein S11 R615_RS15770 PF00416 Ribosomal protein S13/S18 R615_RS15775 PF00344 SecY translocase R615_RS15780 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A R615_RS15785 PF00327 Ribosomal protein L30p/L7e R615_RS15790 PF03719 Ribosomal protein S5, C-terminal domain R615_RS15790 PF00333 Ribosomal protein S5, N-terminal domain R615_RS15795 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast R615_RS15800 PF00347 Ribosomal protein L6 R615_RS15805 PF00410 Ribosomal protein S8 R615_RS15810 PF00253 Ribosomal protein S14p/S29e R615_RS15815 PF00673 ribosomal L5P family C-terminus R615_RS15815 PF00281 Ribosomal protein L5 R615_RS15820 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 R615_RS15825 PF00238 Ribosomal protein L14p/L23e R615_RS15830 PF00366 Ribosomal protein S17 R615_RS15835 PF00831 Ribosomal L29 protein R615_RS15840 PF00252 Ribosomal protein L16p/L10e R615_RS15845 PF00189 Ribosomal protein S3, C-terminal domain R615_RS15845 PF07650 KH domain R615_RS15850 PF00237 Ribosomal protein L22p/L17e R615_RS15855 PF00203 Ribosomal protein S19 R615_RS15860 PF03947 Ribosomal Proteins L2, C-terminal domain R615_RS15860 PF00181 Ribosomal Proteins L2, RNA binding domain R615_RS15865 PF00276 Ribosomal protein L23 R615_RS15870 PF00573 Ribosomal protein L4/L1 family R615_RS15875 PF00297 Ribosomal protein L3 R615_RS15880 PF00338 Ribosomal protein S10p/S20e R615_RS15885 PF00009 Elongation factor Tu GTP binding domain R615_RS15885 PF03143 Elongation factor Tu C-terminal domain R615_RS15885 PF03144 Elongation factor Tu domain 2 R615_RS15890 PF03144 Elongation factor Tu domain 2 R615_RS15890 PF00009 Elongation factor Tu GTP binding domain R615_RS15890 PF14492 Elongation Factor G, domain II R615_RS15890 PF00679 Elongation factor G C-terminus R615_RS15890 PF03764 Elongation factor G, domain IV R615_RS15895 PF00177 Ribosomal protein S7p/S5e R615_RS15900 PF00164 Ribosomal protein S12/S23 R615_RS15905 PF04997 RNA polymerase Rpb1, domain 1 R615_RS15905 PF04983 RNA polymerase Rpb1, domain 3 R615_RS15905 PF05000 RNA polymerase Rpb1, domain 4 R615_RS15905 PF00623 RNA polymerase Rpb1, domain 2 R615_RS15905 PF04998 RNA polymerase Rpb1, domain 5 R615_RS15910 PF04565 RNA polymerase Rpb2, domain 3 R615_RS15910 PF04561 RNA polymerase Rpb2, domain 2 R615_RS15910 PF10385 RNA polymerase beta subunit external 1 domain R615_RS15910 PF04563 RNA polymerase beta subunit R615_RS15910 PF04560 RNA polymerase Rpb2, domain 7 R615_RS15910 PF00562 RNA polymerase Rpb2, domain 6 R615_RS15915 PF16320 Ribosomal protein L7/L12 dimerisation domain R615_RS15915 PF00542 Ribosomal protein L7/L12 C-terminal domain R615_RS15920 PF00466 Ribosomal protein L10 R615_RS15925 PF00687 Ribosomal protein L1p/L10e family R615_RS15930 PF03946 Ribosomal protein L11, N-terminal domain R615_RS15930 PF00298 Ribosomal protein L11, RNA binding domain R615_RS15935 PF00467 KOW motif R615_RS15935 PF02357 Transcription termination factor nusG R615_RS15940 PF00584 SecE/Sec61-gamma subunits of protein translocation complex R615_RS15950 PF03144 Elongation factor Tu domain 2 R615_RS15950 PF00009 Elongation factor Tu GTP binding domain R615_RS15950 PF03143 Elongation factor Tu C-terminal domain R615_RS15955 PF00009 Elongation factor Tu GTP binding domain R615_RS15955 PF00679 Elongation factor G C-terminus R615_RS15955 PF14492 Elongation Factor G, domain II R615_RS15955 PF03764 Elongation factor G, domain IV R615_RS15955 PF03144 Elongation factor Tu domain 2 R615_RS15960 PF03143 Elongation factor Tu C-terminal domain R615_RS15960 PF03144 Elongation factor Tu domain 2 R615_RS15960 PF00009 Elongation factor Tu GTP binding domain R615_RS15985 PF03309 Type III pantothenate kinase R615_RS15990 PF02237 Biotin protein ligase C terminal domain R615_RS15990 PF03099 Biotin/lipoate A/B protein ligase family R615_RS15990 PF08279 HTH domain R615_RS15995 PF06832 Penicillin-Binding Protein C-terminus Family R615_RS15995 PF00905 Penicillin binding protein transpeptidase domain R615_RS15995 PF00912 Transglycosylase R615_RS16000 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain R615_RS16000 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain R615_RS16000 PF11974 Bacterial alpha-2-macroglobulin MG3 domain R615_RS16000 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain R615_RS16000 PF17962 Bacterial macroglobulin domain 6 R615_RS16000 PF01835 MG2 domain R615_RS16000 PF07678 A-macroglobulin TED domain R615_RS16000 PF00207 Alpha-2-macroglobulin family R615_RS16000 PF07703 Alpha-2-macroglobulin bait region domain R615_RS16010 PF00593 TonB dependent receptor R615_RS16010 PF07715 TonB-dependent Receptor Plug Domain R615_RS16025 PF00294 pfkB family carbohydrate kinase R615_RS16045 PF12833 Helix-turn-helix domain R615_RS16045 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain R615_RS16045 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain R615_RS16045 PF02805 Metal binding domain of Ada R615_RS16075 PF06100 MCRA family R615_RS16085 PF00141 Peroxidase R615_RS16145 PF04055 Radical SAM superfamily R615_RS16145 PF06463 Molybdenum Cofactor Synthesis C R615_RS16150 PF12804 MobA-like NTP transferase domain R615_RS16155 PF00994 Probable molybdopterin binding domain R615_RS16160 PF01967 MoaC family R615_RS16165 PF02597 ThiS family R615_RS16170 PF02391 MoaE protein R615_RS16175 PF00437 Type II/IV secretion system protein R615_RS16180 PF00437 Type II/IV secretion system protein R615_RS16185 PF01168 Alanine racemase, N-terminal domain R615_RS16190 PF14748 Pyrroline-5-carboxylate reductase dimerisation R615_RS16190 PF03807 NADP oxidoreductase coenzyme F420-dependent R615_RS16195 PF02325 YGGT family R615_RS16200 PF02594 Uncharacterised ACR, YggU family COG1872 R615_RS16205 PF00561 alpha/beta hydrolase fold R615_RS16210 PF00561 alpha/beta hydrolase fold R615_RS16210 PF07021 Methionine biosynthesis protein MetW R615_RS16220 PF01725 Ham1 family R615_RS16230 PF04055 Radical SAM superfamily R615_RS16230 PF06969 HemN C-terminal domain R615_RS16235 PF01734 Patatin-like phospholipase R615_RS16245 PF00696 Amino acid kinase family R615_RS16245 PF13840 ACT domain R615_RS16250 PF06339 Ectoine synthase R615_RS16255 PF00202 Aminotransferase class-III R615_RS16260 PF00583 Acetyltransferase (GNAT) family R615_RS16265 PF01047 MarR family R615_RS16270 PF00108 Thiolase, N-terminal domain R615_RS16270 PF02803 Thiolase, C-terminal domain R615_RS16275 PF13193 AMP-binding enzyme C-terminal domain R615_RS16275 PF00501 AMP-binding enzyme R615_RS16295 PF01554 MatE R615_RS16315 PF01713 Smr domain R615_RS16320 PF01553 Acyltransferase R615_RS16325 PF00585 C-terminal regulatory domain of Threonine dehydratase R615_RS16325 PF00291 Pyridoxal-phosphate dependent enzyme R615_RS16330 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) R615_RS16340 PF00490 Delta-aminolevulinic acid dehydratase R615_RS16345 PF02503 Polyphosphate kinase middle domain R615_RS16345 PF13090 Polyphosphate kinase C-terminal domain 2 R615_RS16345 PF13089 Polyphosphate kinase N-terminal domain R615_RS16345 PF17941 Polyphosphate kinase C-terminal domain 1 R615_RS16350 PF02541 Ppx/GppA phosphatase family R615_RS16355 PF00085 Thioredoxin R615_RS16360 PF07498 Rho termination factor, N-terminal domain R615_RS16360 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain R615_RS16360 PF07497 Rho termination factor, RNA-binding domain R615_RS16365 PF03480 Bacterial extracellular solute-binding protein, family 7 R615_RS16370 PF13361 UvrD-like helicase C-terminal domain R615_RS16370 PF00580 UvrD/REP helicase N-terminal domain R615_RS16375 PF01380 SIS domain R615_RS16375 PF01418 Helix-turn-helix domain, rpiR family R615_RS16380 PF00909 Ammonium Transporter Family R615_RS16385 PF00543 Nitrogen regulatory protein P-II R615_RS16395 PF04380 Membrane fusogenic activity R615_RS16400 PF00005 ABC transporter R615_RS16405 PF00005 ABC transporter R615_RS16405 PF12399 Branched-chain amino acid ATP-binding cassette transporter R615_RS16415 PF02653 Branched-chain amino acid transport system / permease component R615_RS16425 PF00392 Bacterial regulatory proteins, gntR family R615_RS16425 PF07729 FCD domain R615_RS16430 PF01425 Amidase R615_RS16450 PF00437 Type II/IV secretion system protein R615_RS16450 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain R615_RS16455 PF01928 CYTH domain R615_RS16460 PF01546 Peptidase family M20/M25/M40 R615_RS16460 PF07687 Peptidase dimerisation domain R615_RS16465 PF00583 Acetyltransferase (GNAT) family R615_RS16465 PF00696 Amino acid kinase family R615_RS16505 PF00186 Dihydrofolate reductase R615_RS16510 PF00303 Thymidylate synthase R615_RS16515 PF01790 Prolipoprotein diacylglyceryl transferase R615_RS16520 PF01925 Sulfite exporter TauE/SafE R615_RS16535 PF05951 Bacterial protein of unknown function (DUF882) R615_RS16540 PF05524 PEP-utilising enzyme, N-terminal R615_RS16540 PF02896 PEP-utilising enzyme, TIM barrel domain R615_RS16540 PF00391 PEP-utilising enzyme, mobile domain R615_RS16540 PF01590 GAF domain R615_RS16545 PF00293 NUDIX domain R615_RS16560 PF17785 PUA-like domain R615_RS16560 PF10672 S-adenosylmethionine-dependent methyltransferase R615_RS16570 PF01494 FAD binding domain R615_RS16575 PF01494 FAD binding domain R615_RS16580 PF00557 Metallopeptidase family M24 R615_RS16580 PF05195 Aminopeptidase P, N-terminal domain R615_RS16595 PF05164 Cell division protein ZapA R615_RS16600 PF01812 5-formyltetrahydrofolate cyclo-ligase family R615_RS16620 PF00120 Glutamine synthetase, catalytic domain R615_RS16620 PF03951 Glutamine synthetase, beta-Grasp domain R615_RS16625 PF00679 Elongation factor G C-terminus R615_RS16625 PF00009 Elongation factor Tu GTP binding domain R615_RS16625 PF03144 Elongation factor Tu domain 2 R615_RS16640 PF00390 Malic enzyme, N-terminal domain R615_RS16640 PF03949 Malic enzyme, NAD binding domain R615_RS16645 PF00512 His Kinase A (phospho-acceptor) domain R615_RS16645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase R615_RS16645 PF00672 HAMP domain R615_RS16650 PF00072 Response regulator receiver domain R615_RS16650 PF00486 Transcriptional regulatory protein, C terminal R615_RS16655 PF01594 AI-2E family transporter R615_RS16670 PF04172 LrgB-like family R615_RS16680 PF00293 NUDIX domain R615_RS16685 PF13419 Haloacid dehalogenase-like hydrolase R615_RS16690 PF01479 S4 domain R615_RS16695 PF01430 Hsp33 protein R615_RS16700 PF01293 Phosphoenolpyruvate carboxykinase R615_RS16705 PF00575 S1 RNA binding domain R615_RS16705 PF09371 Tex-like protein N-terminal domain R615_RS16705 PF16921 Tex protein YqgF-like domain R615_RS16705 PF17674 HHH domain R615_RS16710 PF04262 Glutamate-cysteine ligase R615_RS16720 PF02600 Disulfide bond formation protein DsbB R615_RS16725 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ R615_RS16750 PF00440 Bacterial regulatory proteins, tetR family R615_RS16755 PF00753 Metallo-beta-lactamase superfamily R615_RS16755 PF14864 Alkyl sulfatase C-terminal R615_RS16755 PF14863 Alkyl sulfatase dimerisation R615_RS16760 PF12697 Alpha/beta hydrolase family R615_RS16765 PF04304 Protein of unknown function (DUF454) R615_RS16790 PF12848 ABC transporter R615_RS16790 PF00005 ABC transporter R615_RS16805 PF02390 Putative methyltransferase R615_RS16810 PF04241 Protein of unknown function (DUF423) R615_RS16815 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase R615_RS16820 PF00175 Oxidoreductase NAD-binding domain R615_RS16825 PF00924 Mechanosensitive ion channel R615_RS16825 PF05552 Conserved TM helix R615_RS16850 PF02602 Uroporphyrinogen-III synthase HemD R615_RS16855 PF03900 Porphobilinogen deaminase, C-terminal domain R615_RS16855 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain R615_RS16860 PF04397 LytTr DNA-binding domain R615_RS16860 PF00072 Response regulator receiver domain R615_RS16865 PF06580 Histidine kinase R615_RS16865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase R615_RS16865 PF07694 5TMR of 5TMR-LYT R615_RS16870 PF00206 Lyase R615_RS16870 PF14698 Argininosuccinate lyase C-terminal R615_RS16885 PF01841 Transglutaminase-like superfamily R615_RS16885 PF08379 Bacterial transglutaminase-like N-terminal region R615_RS16890 PF04168 A predicted alpha-helical domain with a conserved ER motif. R615_RS16890 PF14403 Circularly permuted ATP-grasp type 2 R615_RS16905 PF14403 Circularly permuted ATP-grasp type 2 R615_RS16925 PF02560 Cyanate lyase C-terminal domain R615_RS16930 PF03466 LysR substrate binding domain R615_RS16930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family R615_RS16945 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain R615_RS16945 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain R615_RS16950 PF02874 ATP synthase alpha/beta family, beta-barrel domain R615_RS16950 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain R615_RS16955 PF00231 ATP synthase R615_RS16960 PF00306 ATP synthase alpha/beta chain, C terminal domain R615_RS16960 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain R615_RS16960 PF02874 ATP synthase alpha/beta family, beta-barrel domain R615_RS16965 PF00213 ATP synthase delta (OSCP) subunit R615_RS16970 PF00430 ATP synthase B/B' CF(0) R615_RS16975 PF00137 ATP synthase subunit C R615_RS16980 PF00119 ATP synthase A chain R615_RS16985 PF03899 ATP synthase I chain R615_RS16995 PF17762 HTH domain found in ParB protein R615_RS16995 PF02195 ParB-like nuclease domain R615_RS17000 PF13614 AAA domain R615_RS17005 PF02527 rRNA small subunit methyltransferase G R615_RS17035 PF00072 Response regulator receiver domain R615_RS17035 PF00486 Transcriptional regulatory protein, C terminal R615_RS17040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase R615_RS17045 PF01507 Phosphoadenosine phosphosulfate reductase family R615_RS17050 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) R615_RS17055 PF00361 Proton-conducting membrane transporter R615_RS17055 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus R615_RS17060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family R615_RS17060 PF03466 LysR substrate binding domain R615_RS17080 PF01134 Glucose inhibited division protein A R615_RS17080 PF13932 GidA associated domain R615_RS17110 PF18284 DNA methylase N-terminal domain R615_RS17110 PF00145 C-5 cytosine-specific DNA methylase R615_RS17145 PF10396 GTP-binding protein TrmE N-terminus R615_RS17145 PF12631 MnmE helical domain R615_RS17145 PF01926 50S ribosome-binding GTPase R615_RS17150 PF14849 YidC periplasmic domain R615_RS17150 PF02096 60Kd inner membrane protein R615_RS17155 PF00825 Ribonuclease P R615_RS17160 PF00468 Ribosomal protein L34 R615_RS17175 PF00563 EAL domain R615_RS17175 PF00360 Phytochrome region R615_RS17175 PF00990 Diguanylate cyclase, GGDEF domain R615_RS17175 PF01590 GAF domain R615_RS17180 PF00082 Subtilase family R615_RS17185 PF00990 Diguanylate cyclase, GGDEF domain R615_RS17190 PF00684 DnaJ central domain R615_RS17190 PF01556 DnaJ C terminal domain R615_RS17190 PF00226 DnaJ domain R615_RS17200 PF00990 Diguanylate cyclase, GGDEF domain R615_RS17200 PF00563 EAL domain R615_RS17200 PF00360 Phytochrome region R615_RS17200 PF01590 GAF domain R615_RS17205 PF05159 Capsule polysaccharide biosynthesis protein R615_RS17210 PF00069 Protein kinase domain R615_RS17210 PF03793 PASTA domain R615_RS17265 PF07963 Prokaryotic N-terminal methylation motif R615_RS17265 PF00114 Pilin (bacterial filament) R615_RS17280 PF13411 MerR HTH family regulatory protein R615_RS17290 PF00082 Subtilase family R615_RS17290 PF04151 Bacterial pre-peptidase C-terminal domain R615_RS17300 PF07690 Major Facilitator Superfamily R615_RS17305 PF10411 Disulfide bond isomerase protein N-terminus R615_RS17305 PF13098 Thioredoxin-like domain R615_RS17310 PF00700 Bacterial flagellin C-terminal helical region R615_RS17310 PF00669 Bacterial flagellin N-terminal helical region R615_RS17310 PF00669 Bacterial flagellin N-terminal helical region R615_RS17310 PF00700 Bacterial flagellin C-terminal helical region R615_RS17315 PF03646 FlaG protein R615_RS17325 PF04347 Flagellar biosynthesis protein, FliO R615_RS17340 PF00691 OmpA family R615_RS17340 PF13488 Glycine zipper R615_RS17345 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) R615_RS17345 PF00072 Response regulator receiver domain R615_RS17345 PF01627 Hpt domain R615_RS17345 PF00512 His Kinase A (phospho-acceptor) domain R615_RS17345 PF00672 HAMP domain R615_RS17345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase R615_RS17355 PF04079 Segregation and condensation complex subunit ScpB R615_RS17380 PF00989 PAS fold R615_RS17380 PF00512 His Kinase A (phospho-acceptor) domain R615_RS17380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase R615_RS17400 PF13581 Histidine kinase-like ATPase domain R615_RS17400 PF13426 PAS domain R615_RS17400 PF07568 Histidine kinase R615_RS17405 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) R615_RS17405 PF00512 His Kinase A (phospho-acceptor) domain R615_RS17405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase R615_RS17405 PF00672 HAMP domain R615_RS17405 PF01627 Hpt domain R615_RS17405 PF00072 Response regulator receiver domain R615_RS17410 PF13673 Acetyltransferase (GNAT) domain R615_RS17415 PF01471 Putative peptidoglycan binding domain R615_RS17415 PF13401 AAA domain R615_RS17430 PF07963 Prokaryotic N-terminal methylation motif R615_RS17430 PF12019 Type II transport protein GspH R615_RS17435 PF07963 Prokaryotic N-terminal methylation motif R615_RS17435 PF02501 Type II secretion system (T2SS), protein I R615_RS17440 PF07963 Prokaryotic N-terminal methylation motif R615_RS17440 PF11612 Type II secretion system (T2SS), protein J R615_RS17460 PF00072 Response regulator receiver domain R615_RS17460 PF00990 Diguanylate cyclase, GGDEF domain R615_RS17480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain R615_RS17480 PF00672 HAMP domain R615_RS17485 PF00085 Thioredoxin R615_RS17510 PF00440 Bacterial regulatory proteins, tetR family R615_RS17605 PF00072 Response regulator receiver domain R615_RS17625 PF03872 Anti sigma-E protein RseA, N-terminal domain R615_RS17625 PF03873 Anti sigma-E protein RseA, C-terminal domain R615_RS17630 PF03150 Di-haem cytochrome c peroxidase R615_RS17635 PF04348 LppC putative lipoprotein R615_RS17640 PF00440 Bacterial regulatory proteins, tetR family R615_RS17640 PF16295 Tetracyclin repressor-like, C-terminal domain R615_RS17650 PF08241 Methyltransferase domain R615_RS17655 PF00563 EAL domain R615_RS17655 PF13188 PAS domain R615_RS17655 PF00990 Diguanylate cyclase, GGDEF domain R615_RS17655 PF03707 Bacterial signalling protein N terminal repeat R615_RS17660 PF00563 EAL domain R615_RS17660 PF01590 GAF domain R615_RS17660 PF00990 Diguanylate cyclase, GGDEF domain R615_RS17660 PF00360 Phytochrome region R615_RS17670 PF00593 TonB dependent receptor R615_RS17670 PF07715 TonB-dependent Receptor Plug Domain R615_RS17690 PF00873 AcrB/AcrD/AcrF family R615_RS17695 PF00440 Bacterial regulatory proteins, tetR family R615_RS17695 PF08361 MAATS-type transcriptional repressor, C-terminal region R615_RS17710 PF01494 FAD binding domain R615_RS17730 PF00082 Subtilase family R615_RS17740 PF00072 Response regulator receiver domain R615_RS17740 PF09308 LuxQ, periplasmic R615_RS17740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase R615_RS17740 PF00512 His Kinase A (phospho-acceptor) domain R615_RS17750 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase R615_RS17755 PF00990 Diguanylate cyclase, GGDEF domain R615_RS17755 PF03707 Bacterial signalling protein N terminal repeat R615_RS17755 PF00563 EAL domain